locus-tag class description CTU_00010 PF01134 Glucose inhibited division protein A CTU_00010 PF13932 GidA associated domain CTU_00020 PF02527 rRNA small subunit methyltransferase G CTU_00030 PF03899 ATP synthase I chain CTU_00040 PF00119 ATP synthase A chain CTU_00050 PF00137 ATP synthase subunit C CTU_00060 PF00430 ATP synthase B/B' CF(0) CTU_00070 PF00213 ATP synthase delta (OSCP) subunit CTU_00080 PF00306 ATP synthase alpha/beta chain, C terminal domain CTU_00080 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTU_00080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTU_00090 PF00231 ATP synthase CTU_00100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTU_00100 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTU_00110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CTU_00110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CTU_00130 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_00130 PF12804 MobA-like NTP transferase domain CTU_00140 PF01380 SIS domain CTU_00160 PF12849 PBP superfamily domain CTU_00170 PF00528 Binding-protein-dependent transport system inner membrane component CTU_00180 PF00528 Binding-protein-dependent transport system inner membrane component CTU_00190 PF00005 ABC transporter CTU_00200 PF01895 PhoU domain CTU_00210 PF00756 Putative esterase CTU_00210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CTU_00220 PF13419 Haloacid dehalogenase-like hydrolase CTU_00230 PF00860 Permease family CTU_00240 PF03358 NADPH-dependent FMN reductase CTU_00290 PF03591 AzlC protein CTU_00340 PF01926 50S ribosome-binding GTPase CTU_00340 PF10396 GTP-binding protein TrmE N-terminus CTU_00340 PF12631 MnmE helical domain CTU_00350 PF02096 60Kd inner membrane protein CTU_00350 PF14849 YidC periplasmic domain CTU_00360 PF01809 Putative membrane protein insertion efficiency factor CTU_00370 PF00825 Ribonuclease P CTU_00375 PF00468 Ribosomal protein L34 CTU_00380 PF00308 Bacterial dnaA protein CTU_00380 PF08299 Bacterial dnaA protein helix-turn-helix CTU_00380 PF11638 DnaA N-terminal domain CTU_00390 PF02767 DNA polymerase III beta subunit, central domain CTU_00390 PF00712 DNA polymerase III beta subunit, N-terminal domain CTU_00390 PF02768 DNA polymerase III beta subunit, C-terminal domain CTU_00400 PF02463 RecF/RecN/SMC N terminal domain CTU_00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_00410 PF01751 Toprim domain CTU_00410 PF18053 DNA gyrase B subunit insert domain CTU_00410 PF00986 DNA gyrase B subunit, carboxyl terminus CTU_00410 PF00204 DNA gyrase B CTU_00430 PF01848 Hok/gef family CTU_00440 PF07729 FCD domain CTU_00440 PF00392 Bacterial regulatory proteins, gntR family CTU_00450 PF05035 2-keto-3-deoxy-galactonokinase CTU_00460 PF01081 KDPG and KHG aldolase CTU_00470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CTU_00470 PF13378 Enolase C-terminal domain-like CTU_00480 PF07690 Major Facilitator Superfamily CTU_00490 PF07690 Major Facilitator Superfamily CTU_00500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTU_00500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTU_00510 PF07676 WD40-like Beta Propeller Repeat CTU_00510 PF12566 Protein of unknown function (DUF3748) CTU_00520 PF07119 Protein of unknown function (DUF1375) CTU_00530 PF00011 Hsp20/alpha crystallin family CTU_00540 PF00011 Hsp20/alpha crystallin family CTU_00550 PF07702 UTRA domain CTU_00550 PF00392 Bacterial regulatory proteins, gntR family CTU_00560 PF02378 Phosphotransferase system, EIIC CTU_00560 PF00367 phosphotransferase system, EIIB CTU_00570 PF11975 Family 4 glycosyl hydrolase C-terminal domain CTU_00570 PF02056 Family 4 glycosyl hydrolase CTU_00580 PF02656 Domain of unknown function (DUF202) CTU_00590 PF02656 Domain of unknown function (DUF202) CTU_00610 PF07690 Major Facilitator Superfamily CTU_00670 PF13677 Membrane MotB of proton-channel complex MotA/MotB CTU_00670 PF00691 OmpA family CTU_00760 PF05638 Type VI secretion system effector, Hcp CTU_00870 PF17871 AAA lid domain CTU_00870 PF07724 AAA domain (Cdc48 subfamily) CTU_00870 PF10431 C-terminal, D2-small domain, of ClpB protein CTU_00870 PF00004 ATPase family associated with various cellular activities (AAA) CTU_00880 PF00069 Protein kinase domain CTU_00910 PF16671 Actin cross-linking domain CTU_00910 PF04717 Type VI secretion system, phage-baseplate injector CTU_01000 PF16671 Actin cross-linking domain CTU_01000 PF04717 Type VI secretion system, phage-baseplate injector CTU_01040 PF05593 RHS Repeat CTU_01040 PF03527 RHS protein CTU_01100 PF16671 Actin cross-linking domain CTU_01100 PF04717 Type VI secretion system, phage-baseplate injector CTU_01120 PF05488 PAAR motif CTU_01120 PF05593 RHS Repeat CTU_01220 PF00121 Triosephosphate isomerase CTU_01230 PF07305 Protein of unknown function (DUF1454) CTU_01240 PF05656 Protein of unknown function (DUF805) CTU_01250 PF00970 Oxidoreductase FAD-binding domain CTU_01250 PF00175 Oxidoreductase NAD-binding domain CTU_01260 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CTU_01270 PF05068 Mannitol repressor CTU_01280 PF01232 Mannitol dehydrogenase Rossmann domain CTU_01280 PF08125 Mannitol dehydrogenase C-terminal domain CTU_01290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CTU_01290 PF02378 Phosphotransferase system, EIIC CTU_01290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTU_01300 PF00043 Glutathione S-transferase, C-terminal domain CTU_01300 PF13417 Glutathione S-transferase, N-terminal domain CTU_01310 PF12390 Selenocysteine synthase N terminal CTU_01310 PF03841 L-seryl-tRNA selenium transferase CTU_01320 PF00009 Elongation factor Tu GTP binding domain CTU_01320 PF03144 Elongation factor Tu domain 2 CTU_01320 PF09107 Elongation factor SelB, winged helix CTU_01320 PF09106 Elongation factor SelB, winged helix CTU_01340 PF00465 Iron-containing alcohol dehydrogenase CTU_01350 PF00480 ROK family CTU_01390 PF04216 Protein involved in formate dehydrogenase formation CTU_01400 PF01292 Prokaryotic cytochrome b561 CTU_01410 PF09163 Formate dehydrogenase N, transmembrane CTU_01410 PF13247 4Fe-4S dicluster domain CTU_01420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_01420 PF01568 Molydopterin dinucleotide binding domain CTU_01420 PF00384 Molybdopterin oxidoreductase CTU_01430 PF00384 Molybdopterin oxidoreductase CTU_01430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_01430 PF01568 Molydopterin dinucleotide binding domain CTU_01440 PF02634 FdhD/NarQ family CTU_01470 PF03591 AzlC protein CTU_01490 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CTU_01490 PF00356 Bacterial regulatory proteins, lacI family CTU_01500 PF16874 Glycosyl hydrolase family 36 C-terminal domain CTU_01500 PF16875 Glycosyl hydrolase family 36 N-terminal domain CTU_01510 PF01306 LacY proton/sugar symporter CTU_01520 PF05336 L-rhamnose mutarotase CTU_01530 PF00465 Iron-containing alcohol dehydrogenase CTU_01540 PF00596 Class II Aldolase and Adducin N-terminal domain CTU_01550 PF06134 L-rhamnose isomerase (RhaA) CTU_01560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CTU_01560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CTU_01580 PF02311 AraC-like ligand binding domain CTU_01580 PF12833 Helix-turn-helix domain CTU_01590 PF12833 Helix-turn-helix domain CTU_01590 PF02311 AraC-like ligand binding domain CTU_01600 PF06379 L-rhamnose-proton symport protein (RhaT) CTU_01610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CTU_01610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CTU_01620 PF03473 MOSC domain CTU_01620 PF03475 3-alpha domain CTU_01630 PF01070 FMN-dependent dehydrogenase CTU_01640 PF07729 FCD domain CTU_01640 PF00392 Bacterial regulatory proteins, gntR family CTU_01650 PF02652 L-lactate permease CTU_01670 PF10928 Protein of unknown function (DUF2810) CTU_01680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CTU_01680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CTU_01690 PF00230 Major intrinsic protein CTU_01700 PF06005 Cell division protein ZapB CTU_01710 PF03737 Aldolase/RraA CTU_01720 PF01040 UbiA prenyltransferase family CTU_01730 PF07724 AAA domain (Cdc48 subfamily) CTU_01730 PF10431 C-terminal, D2-small domain, of ClpB protein CTU_01730 PF00004 ATPase family associated with various cellular activities (AAA) CTU_01740 PF00227 Proteasome subunit CTU_01750 PF05036 Sporulation related domain CTU_01760 PF00356 Bacterial regulatory proteins, lacI family CTU_01770 PF00270 DEAD/DEAH box helicase CTU_01770 PF17764 3′ DNA-binding domain (3′BD) CTU_01770 PF00271 Helicase conserved C-terminal domain CTU_01770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CTU_01770 PF18074 Primosomal protein N C-terminal domain CTU_01780 PF01197 Ribosomal protein L31 CTU_01790 PF01340 Met Apo-repressor, MetJ CTU_01800 PF01053 Cys/Met metabolism PLP-dependent enzyme CTU_01810 PF03447 Homoserine dehydrogenase, NAD binding domain CTU_01810 PF00742 Homoserine dehydrogenase CTU_01810 PF00696 Amino acid kinase family CTU_01820 PF02219 Methylenetetrahydrofolate reductase CTU_01830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_01830 PF08447 PAS fold CTU_01830 PF13426 PAS domain CTU_01840 PF06039 Malate:quinone oxidoreductase (Mqo) CTU_01870 PF02753 Pili assembly chaperone PapD, C-terminal domain CTU_01870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTU_01880 PF13953 PapC C-terminal domain CTU_01880 PF13954 PapC N-terminal domain CTU_01880 PF00577 Outer membrane usher protein CTU_01900 PF00311 Phosphoenolpyruvate carboxylase CTU_01910 PF07687 Peptidase dimerisation domain CTU_01910 PF01546 Peptidase family M20/M25/M40 CTU_01920 PF02774 Semialdehyde dehydrogenase, dimerisation domain CTU_01920 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTU_01930 PF00696 Amino acid kinase family CTU_01940 PF00764 Arginosuccinate synthase CTU_01950 PF14698 Argininosuccinate lyase C-terminal CTU_01950 PF00206 Lyase CTU_01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_01960 PF03466 LysR substrate binding domain CTU_01970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTU_01970 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_01980 PF00440 Bacterial regulatory proteins, tetR family CTU_01990 PF07226 Protein of unknown function (DUF1422) CTU_02000 PF05958 tRNA (Uracil-5-)-methyltransferase CTU_02010 PF07715 TonB-dependent Receptor Plug Domain CTU_02010 PF00593 TonB dependent receptor CTU_02020 PF01177 Asp/Glu/Hydantoin racemase CTU_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_02030 PF03466 LysR substrate binding domain CTU_02040 PF04219 Protein of unknown function, DUF CTU_02050 PF13335 Magnesium chelatase, subunit ChlI C-terminal CTU_02050 PF01078 Magnesium chelatase, subunit ChlI CTU_02070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_02070 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_02070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_02090 PF01063 Amino-transferase class IV CTU_02100 PF00920 Dehydratase family CTU_02110 PF00585 C-terminal regulatory domain of Threonine dehydratase CTU_02110 PF00291 Pyridoxal-phosphate dependent enzyme CTU_02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_02120 PF03466 LysR substrate binding domain CTU_02130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CTU_02130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CTU_02150 PF13361 UvrD-like helicase C-terminal domain CTU_02150 PF00580 UvrD/REP helicase N-terminal domain CTU_02160 PF02541 Ppx/GppA phosphatase family CTU_02170 PF00271 Helicase conserved C-terminal domain CTU_02170 PF00270 DEAD/DEAH box helicase CTU_02180 PF00085 Thioredoxin CTU_02190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTU_02190 PF07498 Rho termination factor, N-terminal domain CTU_02190 PF07497 Rho termination factor, RNA-binding domain CTU_02200 PF00953 Glycosyl transferase family 4 CTU_02210 PF02706 Chain length determinant protein CTU_02220 PF02350 UDP-N-acetylglucosamine 2-epimerase CTU_02230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CTU_02230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CTU_02230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CTU_02240 PF16363 GDP-mannose 4,6 dehydratase CTU_02250 PF00483 Nucleotidyl transferase CTU_02270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTU_02280 PF01943 Polysaccharide biosynthesis protein CTU_02290 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CTU_02300 PF06899 WzyE protein, O-antigen assembly polymerase CTU_02310 PF03808 Glycosyl transferase WecB/TagA/CpsF family CTU_02320 PF00324 Amino acid permease CTU_02340 PF07719 Tetratricopeptide repeat CTU_02340 PF07219 HemY protein N-terminus CTU_02350 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CTU_02360 PF02602 Uroporphyrinogen-III synthase HemD CTU_02370 PF03900 Porphobilinogen deaminase, C-terminal domain CTU_02370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CTU_02380 PF01295 Adenylate cyclase, class-I CTU_02380 PF12633 Adenylate cyclase NT domain CTU_02390 PF01491 Frataxin-like domain CTU_02400 PF13627 Prokaryotic lipoprotein-attachment site CTU_02410 PF01678 Diaminopimelate epimerase CTU_02420 PF04340 Protein of unknown function, DUF484 CTU_02430 PF02899 Phage integrase, N-terminal SAM-like domain CTU_02430 PF00589 Phage integrase family CTU_02440 PF13419 Haloacid dehalogenase-like hydrolase CTU_02450 PF00580 UvrD/REP helicase N-terminal domain CTU_02450 PF13361 UvrD-like helicase C-terminal domain CTU_02470 PF01544 CorA-like Mg2+ transporter protein CTU_02480 PF10947 Protein of unknown function (DUF2628) CTU_02500 PF00892 EamA-like transporter family CTU_02510 PF03061 Thioesterase superfamily CTU_02520 PF02253 Phospholipase A1 CTU_02530 PF16124 RecQ zinc-binding CTU_02530 PF09382 RQC domain CTU_02530 PF00270 DEAD/DEAH box helicase CTU_02530 PF00271 Helicase conserved C-terminal domain CTU_02530 PF00570 HRDC domain CTU_02540 PF01810 LysE type translocator CTU_02550 PF01810 LysE type translocator CTU_02560 PF12146 Serine aminopeptidase, S33 CTU_02580 PF00892 EamA-like transporter family CTU_02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_02590 PF03466 LysR substrate binding domain CTU_02600 PF01717 Cobalamin-independent synthase, Catalytic domain CTU_02600 PF08267 Cobalamin-independent synthase, N-terminal domain CTU_02610 PF01738 Dienelactone hydrolase family CTU_02620 PF01048 Phosphorylase superfamily CTU_02630 PF02646 RmuC family CTU_02640 PF01209 ubiE/COQ5 methyltransferase family CTU_02650 PF02036 SCP-2 sterol transfer family CTU_02660 PF03109 ABC1 family CTU_02670 PF02416 mttA/Hcf106 family CTU_02690 PF00902 Sec-independent protein translocase protein (TatC) CTU_02700 PF01026 TatD related DNase CTU_02720 PF02357 Transcription termination factor nusG CTU_02730 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CTU_02740 PF00970 Oxidoreductase FAD-binding domain CTU_02740 PF00175 Oxidoreductase NAD-binding domain CTU_02760 PF02803 Thiolase, C-terminal domain CTU_02760 PF00108 Thiolase, N-terminal domain CTU_02770 PF00378 Enoyl-CoA hydratase/isomerase CTU_02770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTU_02770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTU_02780 PF00557 Metallopeptidase family M24 CTU_02790 PF09186 Domain of unknown function (DUF1949) CTU_02790 PF01205 Uncharacterized protein family UPF0029 CTU_02800 PF02386 Cation transport protein CTU_02810 PF12724 Flavodoxin domain CTU_02820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CTU_02820 PF01565 FAD binding domain CTU_02830 PF08279 HTH domain CTU_02830 PF03099 Biotin/lipoate A/B protein ligase family CTU_02830 PF02237 Biotin protein ligase C terminal domain CTU_02840 PF00485 Phosphoribulokinase / Uridine kinase family CTU_02850 PF00009 Elongation factor Tu GTP binding domain CTU_02850 PF03143 Elongation factor Tu C-terminal domain CTU_02850 PF03144 Elongation factor Tu domain 2 CTU_02860 PF03143 Elongation factor Tu C-terminal domain CTU_02860 PF00009 Elongation factor Tu GTP binding domain CTU_02860 PF03144 Elongation factor Tu domain 2 CTU_02880 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CTU_02890 PF02357 Transcription termination factor nusG CTU_02890 PF00467 KOW motif CTU_02900 PF03946 Ribosomal protein L11, N-terminal domain CTU_02900 PF00298 Ribosomal protein L11, RNA binding domain CTU_02910 PF00687 Ribosomal protein L1p/L10e family CTU_02920 PF00466 Ribosomal protein L10 CTU_02930 PF00542 Ribosomal protein L7/L12 C-terminal domain CTU_02930 PF16320 Ribosomal protein L7/L12 dimerisation domain CTU_02940 PF00562 RNA polymerase Rpb2, domain 6 CTU_02940 PF10385 RNA polymerase beta subunit external 1 domain CTU_02940 PF04565 RNA polymerase Rpb2, domain 3 CTU_02940 PF04561 RNA polymerase Rpb2, domain 2 CTU_02940 PF04563 RNA polymerase beta subunit CTU_02940 PF04560 RNA polymerase Rpb2, domain 7 CTU_02950 PF04998 RNA polymerase Rpb1, domain 5 CTU_02950 PF05000 RNA polymerase Rpb1, domain 4 CTU_02950 PF04983 RNA polymerase Rpb1, domain 3 CTU_02950 PF00623 RNA polymerase Rpb1, domain 2 CTU_02950 PF04997 RNA polymerase Rpb1, domain 1 CTU_02970 PF12833 Helix-turn-helix domain CTU_02980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CTU_02990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTU_03000 PF06968 Biotin and Thiamin Synthesis associated domain CTU_03000 PF04055 Radical SAM superfamily CTU_03010 PF05690 Thiazole biosynthesis protein ThiG CTU_03020 PF02597 ThiS family CTU_03030 PF00899 ThiF family CTU_03040 PF02581 Thiamine monophosphate synthase CTU_03050 PF13667 ThiC-associated domain CTU_03050 PF01964 Radical SAM ThiC family CTU_03060 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CTU_03070 PF09297 NADH pyrophosphatase zinc ribbon domain CTU_03070 PF00293 NUDIX domain CTU_03080 PF01208 Uroporphyrinogen decarboxylase (URO-D) CTU_03090 PF04493 Endonuclease V CTU_03100 PF04222 Protein of unknown function (DUF416) CTU_03110 PF00216 Bacterial DNA-binding protein CTU_03120 PF07356 Protein of unknown function (DUF1481) CTU_03130 PF02844 Phosphoribosylglycinamide synthetase, N domain CTU_03130 PF02843 Phosphoribosylglycinamide synthetase, C domain CTU_03130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CTU_03140 PF02142 MGS-like domain CTU_03140 PF01808 AICARFT/IMPCHase bienzyme CTU_03150 PF00005 ABC transporter CTU_03160 PF00528 Binding-protein-dependent transport system inner membrane component CTU_03170 PF00528 Binding-protein-dependent transport system inner membrane component CTU_03180 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_03210 PF00873 AcrB/AcrD/AcrF family CTU_03220 PF00529 HlyD membrane-fusion protein of T1SS CTU_03220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_03230 PF08361 MAATS-type transcriptional repressor, C-terminal region CTU_03230 PF00440 Bacterial regulatory proteins, tetR family CTU_03240 PF00990 Diguanylate cyclase, GGDEF domain CTU_03240 PF00563 EAL domain CTU_03240 PF03707 Bacterial signalling protein N terminal repeat CTU_03250 PF02954 Bacterial regulatory protein, Fis family CTU_03260 PF01207 Dihydrouridine synthase (Dus) CTU_03270 PF00194 Eukaryotic-type carbonic anhydrase CTU_03300 PF00474 Sodium:solute symporter family CTU_03310 PF06196 Protein of unknown function (DUF997) CTU_03320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTU_03320 PF00289 Biotin carboxylase, N-terminal domain CTU_03320 PF02785 Biotin carboxylase C-terminal domain CTU_03330 PF00364 Biotin-requiring enzyme CTU_03340 PF01220 Dehydroquinase class II CTU_03350 PF01794 Ferric reductase like transmembrane component CTU_03360 PF00174 Oxidoreductase molybdopterin binding domain CTU_03370 PF08240 Alcohol dehydrogenase GroES-like domain CTU_03370 PF00107 Zinc-binding dehydrogenase CTU_03380 PF00990 Diguanylate cyclase, GGDEF domain CTU_03380 PF17157 Gammaproteobacterial periplasmic sensor domain CTU_03380 PF00563 EAL domain CTU_03410 PF04085 rod shape-determining protein MreC CTU_03420 PF04093 rod shape-determining protein MreD CTU_03430 PF02545 Maf-like protein CTU_03440 PF10150 Ribonuclease E/G family CTU_03440 PF00575 S1 RNA binding domain CTU_03450 PF13116 Protein of unknown function CTU_03450 PF13502 AsmA-like C-terminal region CTU_03460 PF01523 Putative modulator of DNA gyrase CTU_03470 PF03466 LysR substrate binding domain CTU_03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_03480 PF13533 Biotin-lipoyl like CTU_03490 PF04632 Fusaric acid resistance protein family CTU_03500 PF00171 Aldehyde dehydrogenase family CTU_03510 PF01337 Barstar (barnase inhibitor) CTU_03520 PF07338 Protein of unknown function (DUF1471) CTU_03530 PF07338 Protein of unknown function (DUF1471) CTU_03550 PF01316 Arginine repressor, DNA binding domain CTU_03550 PF02863 Arginine repressor, C-terminal domain CTU_03560 PF00056 lactate/malate dehydrogenase, NAD binding domain CTU_03560 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CTU_03570 PF13180 PDZ domain CTU_03580 PF00595 PDZ domain CTU_03580 PF13180 PDZ domain CTU_03590 PF06295 Protein of unknown function (DUF1043) CTU_03600 PF03969 AFG1-like ATPase CTU_03610 PF00572 Ribosomal protein L13 CTU_03620 PF00380 Ribosomal protein S9/S16 CTU_03630 PF00043 Glutathione S-transferase, C-terminal domain CTU_03630 PF02798 Glutathione S-transferase, N-terminal domain CTU_03640 PF04386 Stringent starvation protein B CTU_03650 PF03797 Autotransporter beta-domain CTU_03660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CTU_03660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_03670 PF01493 GXGXG motif CTU_03670 PF04898 Glutamate synthase central domain CTU_03670 PF01645 Conserved region in glutamate synthase CTU_03670 PF00310 Glutamine amidotransferases class-II CTU_03680 PF16199 Radical_SAM C-terminal domain CTU_03680 PF04055 Radical SAM superfamily CTU_03690 PF00072 Response regulator receiver domain CTU_03690 PF18415 Histidine kinase receptor ArcB trans-membrane domain CTU_03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_03690 PF00512 His Kinase A (phospho-acceptor) domain CTU_03690 PF01627 Hpt domain CTU_03690 PF00989 PAS fold CTU_03710 PF00912 Transglycosylase CTU_03720 PF00381 PTS HPr component phosphorylation site CTU_03730 PF03668 P-loop ATPase protein family CTU_03740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CTU_03750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CTU_03760 PF04552 Sigma-54, DNA binding domain CTU_03760 PF04963 Sigma-54 factor, core binding domain CTU_03760 PF00309 Sigma-54 factor, Activator interacting domain (AID) CTU_03770 PF00005 ABC transporter CTU_03770 PF12399 Branched-chain amino acid ATP-binding cassette transporter CTU_03780 PF03968 OstA-like protein CTU_03790 PF06835 Lipopolysaccharide-assembly, LptC-related CTU_03810 PF00571 CBS domain CTU_03810 PF01380 SIS domain CTU_03820 PF01699 Sodium/calcium exchanger protein CTU_03830 PF00005 ABC transporter CTU_03840 PF02405 Permease MlaE CTU_03850 PF02470 MlaD protein CTU_03860 PF05494 MlaC protein CTU_03870 PF13466 STAS domain CTU_03880 PF01722 BolA-like protein CTU_03890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTU_03900 PF13693 Winged helix-turn-helix DNA-binding CTU_03920 PF00348 Polyprenyl synthetase CTU_03930 PF00829 Ribosomal prokaryotic L21 protein CTU_03940 PF01016 Ribosomal L27 protein CTU_03950 PF00892 EamA-like transporter family CTU_03960 PF01926 50S ribosome-binding GTPase CTU_03960 PF01018 GTP1/OBG CTU_03970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_03970 PF00672 HAMP domain CTU_03970 PF00512 His Kinase A (phospho-acceptor) domain CTU_03980 PF00486 Transcriptional regulatory protein, C terminal CTU_03980 PF00072 Response regulator receiver domain CTU_03990 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CTU_04000 PF01272 Transcription elongation factor, GreA/GreB, C-term CTU_04000 PF03449 Transcription elongation factor, N-terminal CTU_04010 PF01985 CRS1 / YhbY (CRM) domain CTU_04020 PF01728 FtsJ-like methyltransferase CTU_04030 PF06480 FtsH Extracellular CTU_04030 PF01434 Peptidase family M41 CTU_04030 PF00004 ATPase family associated with various cellular activities (AAA) CTU_04030 PF17862 AAA+ lid domain CTU_04040 PF00809 Pterin binding enzyme CTU_04050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTU_04050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTU_04050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTU_04050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTU_04070 PF03840 Preprotein translocase SecG subunit CTU_04080 PF17384 RimP C-terminal SH3 domain CTU_04080 PF02576 RimP N-terminal domain CTU_04090 PF08529 NusA N-terminal domain CTU_04090 PF00575 S1 RNA binding domain CTU_04090 PF13184 NusA-like KH domain CTU_04100 PF08364 Bacterial translation initiation factor IF-2 associated region CTU_04100 PF04760 Translation initiation factor IF-2, N-terminal region CTU_04100 PF11987 Translation-initiation factor 2 CTU_04100 PF00009 Elongation factor Tu GTP binding domain CTU_04110 PF02033 Ribosome-binding factor A CTU_04120 PF01509 TruB family pseudouridylate synthase (N terminal domain) CTU_04120 PF09157 Pseudouridine synthase II TruB, C-terminal CTU_04120 PF16198 tRNA pseudouridylate synthase B C-terminal domain CTU_04130 PF00312 Ribosomal protein S15 CTU_04140 PF00575 S1 RNA binding domain CTU_04140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CTU_04140 PF00013 KH domain CTU_04140 PF01138 3' exoribonuclease family, domain 1 CTU_04140 PF03725 3' exoribonuclease family, domain 2 CTU_04150 PF07719 Tetratricopeptide repeat CTU_04150 PF13181 Tetratricopeptide repeat CTU_04160 PF00271 Helicase conserved C-terminal domain CTU_04160 PF00270 DEAD/DEAH box helicase CTU_04160 PF12343 Cold shock protein DEAD box A CTU_04160 PF03880 DbpA RNA binding domain CTU_04180 PF03222 Tryptophan/tyrosine permease family CTU_04190 PF00296 Luciferase-like monooxygenase CTU_04230 PF13508 Acetyltransferase (GNAT) domain CTU_04240 PF01541 GIY-YIG catalytic domain CTU_04260 PF01965 DJ-1/PfpI family CTU_04270 PF13460 NAD(P)H-binding CTU_04280 PF03773 Predicted permease CTU_04290 PF04972 BON domain CTU_04300 PF13580 SIS domain CTU_04310 PF02021 Uncharacterised protein family UPF0102 CTU_04320 PF04348 LppC putative lipoprotein CTU_04330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTU_04340 PF08220 DeoR-like helix-turn-helix domain CTU_04350 PF08240 Alcohol dehydrogenase GroES-like domain CTU_04350 PF00107 Zinc-binding dehydrogenase CTU_04360 PF03611 PTS system sugar-specific permease component CTU_04370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTU_04380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CTU_04390 PF08013 Tagatose 6 phosphate kinase CTU_04400 PF01116 Fructose-bisphosphate aldolase class-II CTU_04430 PF02678 Pirin CTU_04430 PF17954 Quercetinase C-terminal cupin domain CTU_04440 PF03466 LysR substrate binding domain CTU_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_04450 PF13407 Periplasmic binding protein domain CTU_04450 PF00356 Bacterial regulatory proteins, lacI family CTU_04460 PF00251 Glycosyl hydrolases family 32 N-terminal domain CTU_04460 PF08244 Glycosyl hydrolases family 32 C terminal CTU_04470 PF00367 phosphotransferase system, EIIB CTU_04470 PF02378 Phosphotransferase system, EIIC CTU_04480 PF11471 Maltoporin periplasmic N-terminal extension CTU_04480 PF02264 LamB porin CTU_04490 PF00294 pfkB family carbohydrate kinase CTU_04500 PF05656 Protein of unknown function (DUF805) CTU_04510 PF13409 Glutathione S-transferase, N-terminal domain CTU_04520 PF07681 DoxX CTU_04530 PF13997 YqjK-like protein CTU_04540 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CTU_04550 PF05957 Bacterial protein of unknown function (DUF883) CTU_04560 PF06476 Protein of unknown function (DUF1090) CTU_04570 PF13721 SecD export protein N-terminal TM region CTU_04580 PF09335 SNARE associated Golgi protein CTU_04590 PF07729 FCD domain CTU_04590 PF00392 Bacterial regulatory proteins, gntR family CTU_04600 PF07690 Major Facilitator Superfamily CTU_04620 PF02614 Glucuronate isomerase CTU_04630 PF08666 SAF domain CTU_04630 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CTU_04640 PF10688 Bacterial inner membrane protein CTU_04650 PF00375 Sodium:dicarboxylate symporter family CTU_04670 PF03741 Integral membrane protein TerC family CTU_04690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTU_04700 PF02698 DUF218 domain CTU_04710 PF01863 Protein of unknown function DUF45 CTU_04720 PF05175 Methyltransferase small domain CTU_04730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_04730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTU_04740 PF00202 Aminotransferase class-III CTU_04760 PF00990 Diguanylate cyclase, GGDEF domain CTU_04770 PF08447 PAS fold CTU_04770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_04790 PF00672 HAMP domain CTU_04790 PF02203 Tar ligand binding domain homologue CTU_04790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_04800 PF03551 Transcriptional regulator PadR-like family CTU_04810 PF04954 Siderophore-interacting protein CTU_04810 PF08021 Siderophore-interacting FAD-binding domain CTU_04820 PF04055 Radical SAM superfamily CTU_04820 PF11842 Domain of unknown function (DUF3362) CTU_04820 PF08497 Radical SAM N-terminal CTU_04830 PF01042 Endoribonuclease L-PSP CTU_04840 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CTU_04840 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CTU_04850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CTU_04850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CTU_04870 PF01316 Arginine repressor, DNA binding domain CTU_04870 PF02863 Arginine repressor, C-terminal domain CTU_04890 PF03606 C4-dicarboxylate anaerobic carrier CTU_04900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CTU_04900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CTU_04910 PF00696 Amino acid kinase family CTU_04940 PF04074 YhcH/YjgK/YiaL CTU_04950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CTU_04950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CTU_04960 PF06877 Regulator of ribonuclease activity B CTU_04970 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CTU_04990 PF00583 Acetyltransferase (GNAT) family CTU_05000 PF05987 Bacterial protein of unknown function (DUF898) CTU_05010 PF00133 tRNA synthetases class I (I, L, M and V) CTU_05010 PF10458 Valyl tRNA synthetase tRNA binding arm CTU_05010 PF08264 Anticodon-binding domain of tRNA CTU_05020 PF04364 DNA polymerase III chi subunit, HolC CTU_05030 PF00883 Cytosol aminopeptidase family, catalytic domain CTU_05030 PF02789 Cytosol aminopeptidase family, N-terminal domain CTU_05040 PF03739 Lipopolysaccharide export system permease LptF/LptG CTU_05050 PF03739 Lipopolysaccharide export system permease LptF/LptG CTU_05070 PF02733 Dak1 domain CTU_05070 PF02734 DAK2 domain CTU_05090 PF08240 Alcohol dehydrogenase GroES-like domain CTU_05090 PF00107 Zinc-binding dehydrogenase CTU_05170 PF00196 Bacterial regulatory proteins, luxR family CTU_05180 PF03848 Tellurite resistance protein TehB CTU_05180 PF09313 Domain of unknown function (DUF1971) CTU_05280 PF13693 Winged helix-turn-helix DNA-binding CTU_05350 PF00465 Iron-containing alcohol dehydrogenase CTU_05400 PF04286 Protein of unknown function (DUF445) CTU_05410 PF00392 Bacterial regulatory proteins, gntR family CTU_05410 PF00155 Aminotransferase class I and II CTU_05430 PF08845 Toxin SymE, type I toxin-antitoxin system CTU_05440 PF00005 ABC transporter CTU_05440 PF17912 MalK OB fold domain CTU_05450 PF13416 Bacterial extracellular solute-binding protein CTU_05460 PF00528 Binding-protein-dependent transport system inner membrane component CTU_05470 PF00528 Binding-protein-dependent transport system inner membrane component CTU_05480 PF07745 Glycosyl hydrolase family 53 CTU_05490 PF08533 Beta-galactosidase C-terminal domain CTU_05490 PF02449 Beta-galactosidase CTU_05490 PF08532 Beta-galactosidase trimerisation domain CTU_05500 PF00367 phosphotransferase system, EIIB CTU_05500 PF02378 Phosphotransferase system, EIIC CTU_05510 PF02264 LamB porin CTU_05520 PF00356 Bacterial regulatory proteins, lacI family CTU_05540 PF00529 HlyD membrane-fusion protein of T1SS CTU_05540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_05570 PF00356 Bacterial regulatory proteins, lacI family CTU_05580 PF00367 phosphotransferase system, EIIB CTU_05580 PF02378 Phosphotransferase system, EIIC CTU_05590 PF00232 Glycosyl hydrolase family 1 CTU_05610 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CTU_05620 PF07969 Amidohydrolase family CTU_05650 PF00082 Subtilase family CTU_05650 PF03797 Autotransporter beta-domain CTU_05650 PF12951 Passenger-associated-transport-repeat CTU_05670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_05670 PF00672 HAMP domain CTU_05670 PF02203 Tar ligand binding domain homologue CTU_05680 PF00072 Response regulator receiver domain CTU_05680 PF00990 Diguanylate cyclase, GGDEF domain CTU_05690 PF08448 PAS fold CTU_05690 PF00990 Diguanylate cyclase, GGDEF domain CTU_05700 PF00884 Sulfatase CTU_05720 PF01695 IstB-like ATP binding protein CTU_05730 PF17948 DnaT DNA-binding domain CTU_05740 PF02566 OsmC-like protein CTU_05750 PF01047 MarR family CTU_05760 PF12821 Threonine/Serine exporter, ThrE CTU_05770 PF06738 Putative threonine/serine exporter CTU_05780 PF00196 Bacterial regulatory proteins, luxR family CTU_05790 PF00196 Bacterial regulatory proteins, luxR family CTU_05800 PF04073 Aminoacyl-tRNA editing domain CTU_05810 PF02378 Phosphotransferase system, EIIC CTU_05820 PF06276 Ferric iron reductase FhuF-like transporter CTU_05820 PF11575 FhuF 2Fe-2S C-terminal domain CTU_05830 PF00990 Diguanylate cyclase, GGDEF domain CTU_05840 PF07256 Protein of unknown function (DUF1435) CTU_05850 PF08468 Methyltransferase small domain N-terminal CTU_05850 PF05175 Methyltransferase small domain CTU_05860 PF03603 DNA polymerase III psi subunit CTU_05870 PF00583 Acetyltransferase (GNAT) family CTU_05880 PF13419 Haloacid dehalogenase-like hydrolase CTU_05890 PF00009 Elongation factor Tu GTP binding domain CTU_05890 PF03144 Elongation factor Tu domain 2 CTU_05890 PF16658 Class II release factor RF3, C-terminal domain CTU_05900 PF04972 BON domain CTU_05910 PF07043 Protein of unknown function (DUF1328) CTU_05920 PF01734 Patatin-like phospholipase CTU_05930 PF01026 TatD related DNase CTU_05950 PF01773 Na+ dependent nucleoside transporter N-terminus CTU_05950 PF07662 Na+ dependent nucleoside transporter C-terminus CTU_05950 PF07670 Nucleoside recognition CTU_05960 PF01791 DeoC/LacD family aldolase CTU_05970 PF02885 Glycosyl transferase family, helical bundle domain CTU_05970 PF00591 Glycosyl transferase family, a/b domain CTU_05970 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CTU_05980 PF01676 Metalloenzyme superfamily CTU_05990 PF01048 Phosphorylase superfamily CTU_06000 PF03099 Biotin/lipoate A/B protein ligase family CTU_06000 PF10437 Bacterial lipoate protein ligase C-terminus CTU_06010 PF10144 Bacterial virulence factor haemolysin CTU_06020 PF18429 Domain of unknown function (DUF5609) CTU_06030 PF18073 Rubredoxin metal binding domain CTU_06040 PF13521 AAA domain CTU_06040 PF01381 Helix-turn-helix CTU_06050 PF08240 Alcohol dehydrogenase GroES-like domain CTU_06050 PF00107 Zinc-binding dehydrogenase CTU_06060 PF03466 LysR substrate binding domain CTU_06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_06070 PF01061 ABC-2 type transporter CTU_06080 PF00005 ABC transporter CTU_06090 PF11380 Stealth protein CR2, conserved region 2 CTU_06090 PF17101 Stealth protein CR1, conserved region 1 CTU_06100 PF00535 Glycosyl transferase family 2 CTU_06100 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CTU_06120 PF05159 Capsule polysaccharide biosynthesis protein CTU_06130 PF05159 Capsule polysaccharide biosynthesis protein CTU_06140 PF02563 Polysaccharide biosynthesis/export protein CTU_06140 PF10531 SLBB domain CTU_06170 PF00005 ABC transporter CTU_06170 PF12848 ABC transporter CTU_06180 PF14718 Soluble lytic murein transglycosylase L domain CTU_06180 PF01464 Transglycosylase SLT domain CTU_06190 PF01371 Trp repressor protein CTU_06200 PF01931 Protein of unknown function DUF84 CTU_06210 PF00300 Histidine phosphatase superfamily (branch 1) CTU_06220 PF12833 Helix-turn-helix domain CTU_06220 PF06445 GyrI-like small molecule binding domain CTU_06230 PF05981 CreA protein CTU_06240 PF00486 Transcriptional regulatory protein, C terminal CTU_06240 PF00072 Response regulator receiver domain CTU_06250 PF00672 HAMP domain CTU_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_06250 PF00512 His Kinase A (phospho-acceptor) domain CTU_06260 PF06123 Inner membrane protein CreD CTU_06270 PF00072 Response regulator receiver domain CTU_06270 PF00486 Transcriptional regulatory protein, C terminal CTU_06280 PF00588 SpoU rRNA Methylase family CTU_06300 PF00696 Amino acid kinase family CTU_06300 PF01842 ACT domain CTU_06300 PF03447 Homoserine dehydrogenase, NAD binding domain CTU_06300 PF13840 ACT domain CTU_06300 PF00742 Homoserine dehydrogenase CTU_06310 PF00288 GHMP kinases N terminal domain CTU_06310 PF08544 GHMP kinases C terminal CTU_06320 PF14821 Threonine synthase N terminus CTU_06320 PF00291 Pyridoxal-phosphate dependent enzyme CTU_06330 PF03883 Peroxide stress protein YaaA CTU_06340 PF01235 Sodium:alanine symporter family CTU_06350 PF00923 Transaldolase/Fructose-6-phosphate aldolase CTU_06360 PF00994 Probable molybdopterin binding domain CTU_06370 PF07690 Major Facilitator Superfamily CTU_06380 PF01184 GPR1/FUN34/yaaH family CTU_06390 PF00012 Hsp70 protein CTU_06400 PF00226 DnaJ domain CTU_06400 PF00684 DnaJ central domain CTU_06400 PF01556 DnaJ C terminal domain CTU_06410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_06410 PF03466 LysR substrate binding domain CTU_06460 PF00704 Glycosyl hydrolases family 18 CTU_06470 PF06965 Na+/H+ antiporter 1 CTU_06480 PF03466 LysR substrate binding domain CTU_06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_06490 PF01649 Ribosomal protein S20 CTU_06510 PF06574 FAD synthetase CTU_06510 PF01687 Riboflavin kinase CTU_06520 PF06827 Zinc finger found in FPG and IleRS CTU_06520 PF00133 tRNA synthetases class I (I, L, M and V) CTU_06520 PF08264 Anticodon-binding domain of tRNA CTU_06530 PF01252 Signal peptidase (SPase) II CTU_06540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTU_06550 PF02401 LytB protein CTU_06570 PF00701 Dihydrodipicolinate synthetase family CTU_06580 PF00920 Dehydratase family CTU_06590 PF07690 Major Facilitator Superfamily CTU_06600 PF00083 Sugar (and other) transporter CTU_06620 PF01081 KDPG and KHG aldolase CTU_06630 PF05035 2-keto-3-deoxy-galactonokinase CTU_06650 PF01156 Inosine-uridine preferring nucleoside hydrolase CTU_06660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_06660 PF03466 LysR substrate binding domain CTU_06670 PF02272 DHHA1 domain CTU_06670 PF01411 tRNA synthetases class II (A) CTU_06670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTU_06680 PF05173 Dihydrodipicolinate reductase, C-terminus CTU_06680 PF01113 Dihydrodipicolinate reductase, N-terminus CTU_06700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CTU_06700 PF00117 Glutamine amidotransferase class-I CTU_06710 PF02142 MGS-like domain CTU_06710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTU_06710 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CTU_06730 PF06004 Bacterial protein of unknown function (DUF903) CTU_06760 PF02525 Flavodoxin-like fold CTU_06770 PF00999 Sodium/hydrogen exchanger family CTU_06770 PF02254 TrkA-N domain CTU_06780 PF01810 LysE type translocator CTU_06800 PF00186 Dihydrofolate reductase CTU_06810 PF00149 Calcineurin-like phosphoesterase CTU_06820 PF04379 ApaG domain CTU_06830 PF00398 Ribosomal RNA adenine dimethylase CTU_06840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CTU_06850 PF09312 SurA N-terminal domain CTU_06850 PF00639 PPIC-type PPIASE domain CTU_06860 PF04453 LPS transport system D CTU_06860 PF03968 OstA-like protein CTU_06880 PF05099 Tellurite resistance protein TerB CTU_06880 PF00226 DnaJ domain CTU_06890 PF00849 RNA pseudouridylate synthase CTU_06900 PF18337 RapA N-terminal Tudor like domain CTU_06900 PF12137 RNA polymerase recycling family C-terminal CTU_06900 PF00176 SNF2 family N-terminal domain CTU_06900 PF18339 RapA N-terminal Tudor like domain 1 CTU_06900 PF00271 Helicase conserved C-terminal domain CTU_06910 PF00136 DNA polymerase family B CTU_06910 PF03104 DNA polymerase family B, exonuclease domain CTU_06930 PF00596 Class II Aldolase and Adducin N-terminal domain CTU_06940 PF02610 L-arabinose isomerase CTU_06940 PF11762 L-arabinose isomerase C-terminal domain CTU_06950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CTU_06960 PF12833 Helix-turn-helix domain CTU_06960 PF02311 AraC-like ligand binding domain CTU_06970 PF09335 SNARE associated Golgi protein CTU_06980 PF00005 ABC transporter CTU_06990 PF00528 Binding-protein-dependent transport system inner membrane component CTU_07010 PF12793 Sugar transport-related sRNA regulator N-term CTU_07010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_07030 PF07690 Major Facilitator Superfamily CTU_07040 PF00694 Aconitase C-terminal domain CTU_07050 PF00330 Aconitase family (aconitate hydratase) CTU_07060 PF00180 Isocitrate/isopropylmalate dehydrogenase CTU_07070 PF00682 HMGL-like CTU_07070 PF08502 LeuA allosteric (dimerisation) domain CTU_07080 PF03466 LysR substrate binding domain CTU_07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_07110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_07110 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_07110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_07120 PF10369 Small subunit of acetolactate synthase CTU_07130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CTU_07130 PF00356 Bacterial regulatory proteins, lacI family CTU_07140 PF02381 MraZ protein, putative antitoxin-like CTU_07150 PF01795 MraW methylase family CTU_07160 PF04999 Cell division protein FtsL CTU_07170 PF03717 Penicillin-binding Protein dimerisation domain CTU_07170 PF00905 Penicillin binding protein transpeptidase domain CTU_07180 PF01225 Mur ligase family, catalytic domain CTU_07180 PF02875 Mur ligase family, glutamate ligase domain CTU_07180 PF08245 Mur ligase middle domain CTU_07190 PF02875 Mur ligase family, glutamate ligase domain CTU_07190 PF01225 Mur ligase family, catalytic domain CTU_07190 PF08245 Mur ligase middle domain CTU_07200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CTU_07200 PF00953 Glycosyl transferase family 4 CTU_07210 PF02875 Mur ligase family, glutamate ligase domain CTU_07210 PF08245 Mur ligase middle domain CTU_07220 PF01098 Cell cycle protein CTU_07230 PF04101 Glycosyltransferase family 28 C-terminal domain CTU_07230 PF03033 Glycosyltransferase family 28 N-terminal domain CTU_07240 PF01225 Mur ligase family, catalytic domain CTU_07240 PF02875 Mur ligase family, glutamate ligase domain CTU_07240 PF08245 Mur ligase middle domain CTU_07250 PF01820 D-ala D-ala ligase N-terminus CTU_07250 PF07478 D-ala D-ala ligase C-terminus CTU_07260 PF03799 Cell division protein FtsQ CTU_07260 PF08478 POTRA domain, FtsQ-type CTU_07270 PF02491 SHS2 domain inserted in FTSA CTU_07280 PF00091 Tubulin/FtsZ family, GTPase domain CTU_07280 PF12327 FtsZ family, C-terminal domain CTU_07290 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CTU_07310 PF06558 Secretion monitor precursor protein (SecM) CTU_07320 PF07517 SecA DEAD-like domain CTU_07320 PF02810 SEC-C motif CTU_07320 PF01043 SecA preprotein cross-linking domain CTU_07320 PF07516 SecA Wing and Scaffold domain CTU_07330 PF00293 NUDIX domain CTU_07340 PF03884 DNA gyrase inhibitor YacG CTU_07350 PF07072 Cell division protein CTU_07360 PF01121 Dephospho-CoA kinase CTU_07370 PF00478 IMP dehydrogenase / GMP reductase domain CTU_07380 PF00482 Type II secretion system (T2SS), protein F CTU_07390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CTU_07390 PF00437 Type II/IV secretion system protein CTU_07400 PF07963 Prokaryotic N-terminal methylation motif CTU_07410 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CTU_07410 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CTU_07420 PF01510 N-acetylmuramoyl-L-alanine amidase CTU_07430 PF17113 Regulatory signalling modulator protein AmpE CTU_07440 PF04616 Glycosyl hydrolases family 43 CTU_07440 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CTU_07460 PF00324 Amino acid permease CTU_07480 PF00392 Bacterial regulatory proteins, gntR family CTU_07480 PF07729 FCD domain CTU_07490 PF17831 Pyruvate dehydrogenase E1 component middle domain CTU_07490 PF00456 Transketolase, thiamine diphosphate binding domain CTU_07500 PF02817 e3 binding domain CTU_07500 PF00364 Biotin-requiring enzyme CTU_07500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CTU_07510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_07510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTU_07530 PF11737 Protein of unknown function (DUF3300) CTU_07550 PF11791 Aconitate B N-terminal domain CTU_07550 PF00330 Aconitase family (aconitate hydratase) CTU_07550 PF06434 Aconitate hydratase 2 N-terminus CTU_07580 PF06062 Uncharacterised protein family (UPF0231) CTU_07590 PF02675 S-adenosylmethionine decarboxylase CTU_07600 PF17284 Spermidine synthase tetramerisation domain CTU_07610 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CTU_07620 PF00394 Multicopper oxidase CTU_07620 PF07731 Multicopper oxidase CTU_07620 PF07732 Multicopper oxidase CTU_07630 PF01011 PQQ enzyme repeat CTU_07640 PF00156 Phosphoribosyl transferase domain CTU_07650 PF00484 Carbonic anhydrase CTU_07660 PF00005 ABC transporter CTU_07670 PF01061 ABC-2 type transporter CTU_07680 PF03610 PTS system fructose IIA component CTU_07690 PF01522 Polysaccharide deacetylase CTU_07700 PF02261 Aspartate decarboxylase CTU_07710 PF02569 Pantoate-beta-alanine ligase CTU_07720 PF02548 Ketopantoate hydroxymethyltransferase CTU_07730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CTU_07740 PF01743 Poly A polymerase head domain CTU_07740 PF12627 Probable RNA and SrmB- binding site of polymerase A CTU_07740 PF12626 Polymerase A arginine-rich C-terminus CTU_07750 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTU_07760 PF01258 Prokaryotic dksA/traR C4-type zinc finger CTU_07770 PF17746 SfsA N-terminal OB domain CTU_07770 PF03749 Sugar fermentation stimulation protein RE domain CTU_07780 PF02834 LigT like Phosphoesterase CTU_07790 PF00270 DEAD/DEAH box helicase CTU_07790 PF04408 Helicase associated domain (HA2) CTU_07790 PF00271 Helicase conserved C-terminal domain CTU_07790 PF08482 ATP-dependent helicase C-terminal CTU_07800 PF00905 Penicillin binding protein transpeptidase domain CTU_07800 PF00912 Transglycosylase CTU_07800 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CTU_07800 PF14814 Bifunctional transglycosylase second domain CTU_07810 PF00593 TonB dependent receptor CTU_07810 PF07715 TonB-dependent Receptor Plug Domain CTU_07820 PF00005 ABC transporter CTU_07830 PF01497 Periplasmic binding protein CTU_07840 PF01032 FecCD transport family CTU_07850 PF00202 Aminotransferase class-III CTU_07860 PF00654 Voltage gated chloride channel CTU_07870 PF01521 Iron-sulphur cluster biosynthesis CTU_07880 PF03458 UPF0126 domain CTU_07890 PF01497 Periplasmic binding protein CTU_07900 PF01048 Phosphorylase superfamily CTU_07910 PF01966 HD domain CTU_07910 PF13286 Phosphohydrolase-associated domain CTU_07920 PF00595 PDZ domain CTU_07930 PF11944 Protein of unknown function (DUF3461) CTU_07940 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_07940 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CTU_07940 PF14602 Hexapeptide repeat of succinyl-transferase CTU_07950 PF08335 GlnD PII-uridylyltransferase CTU_07950 PF01909 Nucleotidyltransferase domain CTU_07950 PF01842 ACT domain CTU_07950 PF01966 HD domain CTU_07960 PF00557 Metallopeptidase family M24 CTU_07970 PF00318 Ribosomal protein S2 CTU_07980 PF00889 Elongation factor TS CTU_07990 PF00696 Amino acid kinase family CTU_08000 PF01765 Ribosome recycling factor CTU_08010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CTU_08010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CTU_08010 PF13288 DXP reductoisomerase C-terminal domain CTU_08020 PF01255 Putative undecaprenyl diphosphate synthase CTU_08040 PF02163 Peptidase family M50 CTU_08040 PF17820 PDZ domain CTU_08050 PF07244 Surface antigen variable number repeat CTU_08050 PF01103 Surface antigen CTU_08060 PF03938 Outer membrane protein (OmpH-like) CTU_08070 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_08070 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CTU_08080 PF07977 FabA-like domain CTU_08090 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CTU_08090 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_08100 PF02684 Lipid-A-disaccharide synthetase CTU_08110 PF01351 Ribonuclease HII CTU_08120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CTU_08120 PF02811 PHP domain CTU_08120 PF07733 Bacterial DNA polymerase III alpha NTPase domain CTU_08120 PF01336 OB-fold nucleic acid binding domain CTU_08120 PF14579 Helix-hairpin-helix motif CTU_08130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CTU_08160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTU_08170 PF09179 TilS substrate binding domain CTU_08170 PF11734 TilS substrate C-terminal domain CTU_08170 PF01171 PP-loop family CTU_08180 PF00034 Cytochrome c CTU_08190 PF07073 Modulator of Rho-dependent transcription termination (ROF) CTU_08200 PF06786 Uncharacterised protein family (UPF0253) CTU_08210 PF07152 YaeQ protein CTU_08220 PF00472 RF-1 domain CTU_08230 PF17185 NlpE C-terminal OB domain CTU_08230 PF04170 NlpE N-terminal domain CTU_08240 PF04073 Aminoacyl-tRNA editing domain CTU_08240 PF03129 Anticodon binding domain CTU_08240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTU_08250 PF01980 tRNA-methyltransferase O CTU_08250 PF18389 TrmO C-terminal domain CTU_08260 PF16358 RcsF lipoprotein CTU_08270 PF03180 NLPA lipoprotein CTU_08280 PF00528 Binding-protein-dependent transport system inner membrane component CTU_08290 PF00005 ABC transporter CTU_08290 PF09383 NIL domain CTU_08310 PF00248 Aldo/keto reductase family CTU_08320 PF03466 LysR substrate binding domain CTU_08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_08330 PF03372 Endonuclease/Exonuclease/phosphatase family CTU_08340 PF08241 Methyltransferase domain CTU_08350 PF01464 Transglycosylase SLT domain CTU_08350 PF01476 LysM domain CTU_08360 PF16123 Hydroxyacylglutathione hydrolase C-terminus CTU_08360 PF00753 Metallo-beta-lactamase superfamily CTU_08370 PF08241 Methyltransferase domain CTU_08380 PF00075 RNase H CTU_08390 PF00929 Exonuclease CTU_08400 PF00795 Carbon-nitrogen hydrolase CTU_08410 PF02770 Acyl-CoA dehydrogenase, middle domain CTU_08410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTU_08410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTU_08410 PF09317 Domain of unknown function (DUF1974) CTU_08420 PF13580 SIS domain CTU_08430 PF13230 Glutamine amidotransferases class-II CTU_08440 PF03734 L,D-transpeptidase catalytic domain CTU_08450 PF03009 Glycerophosphoryl diester phosphodiesterase family CTU_08460 PF00817 impB/mucB/samB family CTU_08460 PF11798 IMS family HHH motif CTU_08460 PF11799 impB/mucB/samB family C-terminal domain CTU_08480 PF00472 RF-1 domain CTU_08490 PF07687 Peptidase dimerisation domain CTU_08490 PF01546 Peptidase family M20/M25/M40 CTU_08500 PF00156 Phosphoribosyl transferase domain CTU_08520 PF07417 Sigma factor-binding transcriptional regulator Crl CTU_08530 PF00267 Gram-negative porin CTU_08540 PF01472 PUA domain CTU_08540 PF00696 Amino acid kinase family CTU_08550 PF00171 Aldehyde dehydrogenase family CTU_08660 PF07687 Peptidase dimerisation domain CTU_08660 PF01546 Peptidase family M20/M25/M40 CTU_08690 PF00675 Insulinase (Peptidase family M16) CTU_08710 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CTU_08720 PF03070 TENA/THI-4/PQQC family CTU_08730 PF12706 Beta-lactamase superfamily domain CTU_08740 PF01244 Membrane dipeptidase (Peptidase family M19) CTU_08790 PF12833 Helix-turn-helix domain CTU_08790 PF01965 DJ-1/PfpI family CTU_08800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CTU_08800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTU_08810 PF01042 Endoribonuclease L-PSP CTU_08820 PF00440 Bacterial regulatory proteins, tetR family CTU_08850 PF00106 short chain dehydrogenase CTU_08850 PF00561 alpha/beta hydrolase fold CTU_08860 PF00356 Bacterial regulatory proteins, lacI family CTU_08870 PF02929 Beta galactosidase small chain CTU_08870 PF16353 Domain of unknown function(DUF4981) CTU_08870 PF00703 Glycosyl hydrolases family 2 CTU_08870 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CTU_08870 PF02837 Glycosyl hydrolases family 2, sugar binding domain CTU_08880 PF01306 LacY proton/sugar symporter CTU_08890 PF03949 Malic enzyme, NAD binding domain CTU_08890 PF00390 Malic enzyme, N-terminal domain CTU_08920 PF00171 Aldehyde dehydrogenase family CTU_08930 PF04962 KduI/IolB family CTU_08940 PF01418 Helix-turn-helix domain, rpiR family CTU_08940 PF01380 SIS domain CTU_08950 PF00294 pfkB family carbohydrate kinase CTU_08970 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_08970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_08970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_08980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTU_08980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTU_08990 PF01261 Xylose isomerase-like TIM barrel CTU_09000 PF01261 Xylose isomerase-like TIM barrel CTU_09010 PF00083 Sugar (and other) transporter CTU_09040 PF00005 ABC transporter CTU_09040 PF09383 NIL domain CTU_09050 PF00528 Binding-protein-dependent transport system inner membrane component CTU_09060 PF03180 NLPA lipoprotein CTU_09070 PF00723 Glycosyl hydrolases family 15 CTU_09080 PF05870 Phenolic acid decarboxylase (PAD) CTU_09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_09090 PF03466 LysR substrate binding domain CTU_09120 PF03466 LysR substrate binding domain CTU_09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_09130 PF01594 AI-2E family transporter CTU_09140 PF00916 Sulfate permease family CTU_09140 PF01740 STAS domain CTU_09150 PF00484 Carbonic anhydrase CTU_09190 PF08668 HDOD domain CTU_09190 PF00563 EAL domain CTU_09210 PF00293 NUDIX domain CTU_09220 PF00455 DeoR C terminal sensor domain CTU_09220 PF08220 DeoR-like helix-turn-helix domain CTU_09250 PF03279 Bacterial lipid A biosynthesis acyltransferase CTU_09260 PF03969 AFG1-like ATPase CTU_09270 PF01848 Hok/gef family CTU_09280 PF00106 short chain dehydrogenase CTU_09290 PF00106 short chain dehydrogenase CTU_09300 PF01965 DJ-1/PfpI family CTU_09320 PF01654 Cytochrome bd terminal oxidase subunit I CTU_09340 PF12838 4Fe-4S dicluster domain CTU_09340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CTU_09340 PF00384 Molybdopterin oxidoreductase CTU_09340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_09340 PF01568 Molydopterin dinucleotide binding domain CTU_09360 PF00324 Amino acid permease CTU_09370 PF02574 Homocysteine S-methyltransferase CTU_09380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTU_09390 PF00005 ABC transporter CTU_09400 PF00528 Binding-protein-dependent transport system inner membrane component CTU_09410 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CTU_09440 PF00490 Delta-aminolevulinic acid dehydratase CTU_09450 PF02464 Competence-damaged protein CTU_09460 PF03797 Autotransporter beta-domain CTU_09470 PF15977 Winged helix-turn-helix DNA binding CTU_09480 PF00144 Beta-lactamase CTU_09500 PF05992 SbmA/BacA-like family CTU_09510 PF07759 Protein of unknown function (DUF1615) CTU_09520 PF10954 Protein of unknown function (DUF2755) CTU_09530 PF10953 Protein of unknown function (DUF2754) CTU_09540 PF07478 D-ala D-ala ligase C-terminus CTU_09540 PF01820 D-ala D-ala ligase N-terminus CTU_09560 PF07690 Major Facilitator Superfamily CTU_09570 PF10796 Sigma-S stabilisation anti-adaptor protein CTU_09590 PF00083 Sugar (and other) transporter CTU_09600 PF03807 NADP oxidoreductase coenzyme F420-dependent CTU_09600 PF14748 Pyrroline-5-carboxylate reductase dimerisation CTU_09620 PF04239 Protein of unknown function (DUF421) CTU_09630 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CTU_09640 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) CTU_09660 PF01202 Shikimate kinase CTU_09670 PF16362 YaiA protein CTU_09680 PF07302 AroM protein CTU_09690 PF06865 Pyrimidine/purine nucleoside phosphorylase CTU_09700 PF04381 Putative exonuclease, RdgC CTU_09710 PF00480 ROK family CTU_09720 PF13476 AAA domain CTU_09730 PF12320 Type 5 capsule protein repressor C-terminal domain CTU_09730 PF00149 Calcineurin-like phosphoesterase CTU_09750 PF00072 Response regulator receiver domain CTU_09750 PF00486 Transcriptional regulatory protein, C terminal CTU_09760 PF11808 Phosphate regulon sensor protein PhoR CTU_09760 PF00989 PAS fold CTU_09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_09760 PF00512 His Kinase A (phospho-acceptor) domain CTU_09770 PF05525 Branched-chain amino acid transport protein CTU_09780 PF00324 Amino acid permease CTU_09790 PF02903 Alpha amylase, N-terminal ig-like domain CTU_09790 PF00128 Alpha amylase, catalytic domain CTU_09820 PF04336 Acyl carrier protein phosphodiesterase CTU_09830 PF02547 Queuosine biosynthesis protein CTU_09840 PF01702 Queuine tRNA-ribosyltransferase CTU_09850 PF02699 Preprotein translocase subunit CTU_09860 PF13721 SecD export protein N-terminal TM region CTU_09860 PF02355 Protein export membrane protein CTU_09860 PF07549 SecD/SecF GG Motif CTU_09870 PF07549 SecD/SecF GG Motif CTU_09870 PF02355 Protein export membrane protein CTU_09880 PF03502 Nucleoside-specific channel-forming protein, Tsx CTU_09890 PF11622 Protein of unknown function (DUF3251) CTU_09900 PF03477 ATP cone domain CTU_09910 PF01872 RibD C-terminal domain CTU_09910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTU_09920 PF00885 6,7-dimethyl-8-ribityllumazine synthase CTU_09930 PF01029 NusB family CTU_09940 PF02769 AIR synthase related protein, C-terminal domain CTU_09940 PF00586 AIR synthase related protein, N-terminal domain CTU_09950 PF00248 Aldo/keto reductase family CTU_09960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CTU_09960 PF02779 Transketolase, pyrimidine binding domain CTU_09960 PF02780 Transketolase, C-terminal domain CTU_09970 PF00348 Polyprenyl synthetase CTU_09980 PF02609 Exonuclease VII small subunit CTU_09990 PF02926 THUMP domain CTU_09990 PF02568 Thiamine biosynthesis protein (ThiI) CTU_10000 PF01965 DJ-1/PfpI family CTU_10010 PF02558 Ketopantoate reductase PanE/ApbA CTU_10010 PF08546 Ketopantoate reductase PanE/ApbA C terminal CTU_10020 PF04461 Protein of unknown function (DUF520) CTU_10030 PF07690 Major Facilitator Superfamily CTU_10040 PF01040 UbiA prenyltransferase family CTU_10050 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CTU_10060 PF00510 Cytochrome c oxidase subunit III CTU_10070 PF00115 Cytochrome C and Quinol oxidase polypeptide I CTU_10080 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CTU_10080 PF06481 COX Aromatic Rich Motif CTU_10090 PF00012 Hsp70 protein CTU_10110 PF07690 Major Facilitator Superfamily CTU_10120 PF03923 Uncharacterized lipoprotein CTU_10120 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CTU_10130 PF01722 BolA-like protein CTU_10160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTU_10160 PF05698 Bacterial trigger factor protein (TF) C-terminus CTU_10160 PF05697 Bacterial trigger factor protein (TF) CTU_10170 PF00574 Clp protease CTU_10180 PF10431 C-terminal, D2-small domain, of ClpB protein CTU_10180 PF07724 AAA domain (Cdc48 subfamily) CTU_10180 PF06689 ClpX C4-type zinc finger CTU_10190 PF02190 ATP-dependent protease La (LON) substrate-binding domain CTU_10190 PF05362 Lon protease (S16) C-terminal proteolytic domain CTU_10190 PF00004 ATPase family associated with various cellular activities (AAA) CTU_10200 PF00216 Bacterial DNA-binding protein CTU_10210 PF13145 PPIC-type PPIASE domain CTU_10270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CTU_10280 PF00753 Metallo-beta-lactamase superfamily CTU_10290 PF06508 Queuosine biosynthesis protein QueC CTU_10300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_10300 PF12793 Sugar transport-related sRNA regulator N-term CTU_10360 PF01037 Lrp/AsnC ligand binding domain CTU_10360 PF13404 AsnC-type helix-turn-helix domain CTU_10370 PF00005 ABC transporter CTU_10370 PF00664 ABC transporter transmembrane region CTU_10380 PF00664 ABC transporter transmembrane region CTU_10380 PF00005 ABC transporter CTU_10390 PF00543 Nitrogen regulatory protein P-II CTU_10400 PF00909 Ammonium Transporter Family CTU_10420 PF09619 Type III secretion system lipoprotein chaperone (YscW) CTU_10430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTU_10440 PF18019 HD domain CTU_10440 PF00270 DEAD/DEAH box helicase CTU_10440 PF18395 Cas3 C-terminal domain CTU_10450 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CTU_10470 PF09344 CT1975-like protein CTU_10500 PF01867 CRISPR associated protein Cas1 CTU_10510 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CTU_10570 PF00814 Glycoprotease family CTU_10570 PF00583 Acetyltransferase (GNAT) family CTU_10580 PF00563 EAL domain CTU_10580 PF12792 CSS motif domain associated with EAL CTU_10590 PF00528 Binding-protein-dependent transport system inner membrane component CTU_10600 PF09383 NIL domain CTU_10600 PF00005 ABC transporter CTU_10610 PF03180 NLPA lipoprotein CTU_10630 PF00672 HAMP domain CTU_10630 PF02203 Tar ligand binding domain homologue CTU_10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_10640 PF01197 Ribosomal protein L31 CTU_10650 PF00444 Ribosomal protein L36 CTU_10660 PF12464 Maltose acetyltransferase CTU_10660 PF14602 Hexapeptide repeat of succinyl-transferase CTU_10670 PF05321 Haemolysin expression modulating protein CTU_10680 PF10757 Biofilm formation regulator YbaJ CTU_10690 PF00873 AcrB/AcrD/AcrF family CTU_10700 PF00529 HlyD membrane-fusion protein of T1SS CTU_10700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_10710 PF00440 Bacterial regulatory proteins, tetR family CTU_10710 PF08361 MAATS-type transcriptional repressor, C-terminal region CTU_10720 PF12794 Mechanosensitive ion channel inner membrane domain 1 CTU_10720 PF00924 Mechanosensitive ion channel CTU_10720 PF12795 Mechanosensitive ion channel porin domain CTU_10730 PF10689 Protein of unknown function (DUF2496) CTU_10740 PF07445 Primosomal replication protein priC CTU_10750 PF04304 Protein of unknown function (DUF454) CTU_10760 PF00156 Phosphoribosyl transferase domain CTU_10770 PF12170 DNA polymerase III tau subunit V interacting with alpha CTU_10770 PF12169 DNA polymerase III subunits gamma and tau domain III CTU_10770 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CTU_10780 PF02575 YbaB/EbfC DNA-binding family CTU_10790 PF02132 RecR protein CTU_10790 PF13662 Toprim domain CTU_10800 PF00183 Hsp90 protein CTU_10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_10810 PF05191 Adenylate kinase, active site lid CTU_10820 PF05651 Putative sugar diacid recognition CTU_10820 PF17853 GGDEF-like domain CTU_10820 PF13556 PucR C-terminal helix-turn-helix domain CTU_10830 PF02447 GntP family permease CTU_10840 PF02595 Glycerate kinase family CTU_10850 PF00762 Ferrochelatase CTU_10860 PF00294 pfkB family carbohydrate kinase CTU_10870 PF00999 Sodium/hydrogen exchanger family CTU_10870 PF02254 TrkA-N domain CTU_10880 PF02872 5'-nucleotidase, C-terminal domain CTU_10880 PF00149 Calcineurin-like phosphoesterase CTU_10890 PF04073 Aminoacyl-tRNA editing domain CTU_10900 PF01963 TraB family CTU_10910 PF00403 Heavy-metal-associated domain CTU_10930 PF13411 MerR HTH family regulatory protein CTU_10960 PF01957 NfeD-like C-terminal, partner-binding CTU_10970 PF01145 SPFH domain / Band 7 family CTU_10970 PF16200 C-terminal region of band_7 CTU_10980 PF00085 Thioredoxin CTU_10990 PF00106 short chain dehydrogenase CTU_11000 PF13472 GDSL-like Lipase/Acylhydrolase family CTU_11010 PF00005 ABC transporter CTU_11030 PF00581 Rhodanese-like domain CTU_11050 PF00571 CBS domain CTU_11050 PF00291 Pyridoxal-phosphate dependent enzyme CTU_11060 PF01053 Cys/Met metabolism PLP-dependent enzyme CTU_11070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CTU_11070 PF02222 ATP-grasp domain CTU_11080 PF00731 AIR carboxylase CTU_11090 PF00149 Calcineurin-like phosphoesterase CTU_11100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CTU_11110 PF09190 DALR domain CTU_11110 PF01406 tRNA synthetases class I (C) catalytic domain CTU_11120 PF00356 Bacterial regulatory proteins, lacI family CTU_11120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CTU_11130 PF00367 phosphotransferase system, EIIB CTU_11130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CTU_11130 PF02378 Phosphotransferase system, EIIC CTU_11150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CTU_11150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CTU_11160 PF00589 Phage integrase family CTU_11290 PF03837 RecT family CTU_11450 PF00772 DnaB-like helicase N terminal domain CTU_11450 PF03796 DnaB-like helicase C terminal domain CTU_11570 PF05866 Endodeoxyribonuclease RusA CTU_11630 PF00182 Chitinase class I CTU_11700 PF04466 Phage terminase large subunit CTU_11700 PF17288 Terminase RNAseH like domain CTU_11930 PF01757 Acyltransferase family CTU_11950 PF00255 Glutathione peroxidase CTU_11970 PF01638 HxlR-like helix-turn-helix CTU_12000 PF07690 Major Facilitator Superfamily CTU_12010 PF01022 Bacterial regulatory protein, arsR family CTU_12020 PF11127 Protein of unknown function (DUF2892) CTU_12020 PF00581 Rhodanese-like domain CTU_12110 PF17871 AAA lid domain CTU_12110 PF07724 AAA domain (Cdc48 subfamily) CTU_12110 PF10431 C-terminal, D2-small domain, of ClpB protein CTU_12110 PF00004 ATPase family associated with various cellular activities (AAA) CTU_12120 PF16970 Type-1 fimbrial protein, A CTU_12130 PF02753 Pili assembly chaperone PapD, C-terminal domain CTU_12130 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTU_12140 PF13953 PapC C-terminal domain CTU_12140 PF13954 PapC N-terminal domain CTU_12140 PF00577 Outer membrane usher protein CTU_12200 PF00691 OmpA family CTU_12200 PF01389 OmpA-like transmembrane domain CTU_12230 PF04717 Type VI secretion system, phage-baseplate injector CTU_12280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_12280 PF02203 Tar ligand binding domain homologue CTU_12280 PF00672 HAMP domain CTU_12290 PF04107 Glutamate-cysteine ligase family 2(GCS2) CTU_12310 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CTU_12310 PF01648 4'-phosphopantetheinyl transferase superfamily CTU_12320 PF00593 TonB dependent receptor CTU_12320 PF07715 TonB-dependent Receptor Plug Domain CTU_12330 PF11806 Domain of unknown function (DUF3327) CTU_12330 PF00756 Putative esterase CTU_12340 PF03621 MbtH-like protein CTU_12350 PF13193 AMP-binding enzyme C-terminal domain CTU_12350 PF00550 Phosphopantetheine attachment site CTU_12350 PF00668 Condensation domain CTU_12350 PF00975 Thioesterase domain CTU_12350 PF00501 AMP-binding enzyme CTU_12360 PF03079 ARD/ARD' family CTU_12380 PF00596 Class II Aldolase and Adducin N-terminal domain CTU_12390 PF00155 Aminotransferase class I and II CTU_12400 PF03466 LysR substrate binding domain CTU_12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_12410 PF00578 AhpC/TSA family CTU_12410 PF10417 C-terminal domain of 1-Cys peroxiredoxin CTU_12420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_12420 PF13192 Thioredoxin domain CTU_12430 PF00582 Universal stress protein family CTU_12440 PF00107 Zinc-binding dehydrogenase CTU_12440 PF08240 Alcohol dehydrogenase GroES-like domain CTU_12440 PF13823 Alcohol dehydrogenase GroES-associated CTU_12450 PF01272 Transcription elongation factor, GreA/GreB, C-term CTU_12450 PF14760 Rnk N-terminus CTU_12460 PF02447 GntP family permease CTU_12470 PF01547 Bacterial extracellular solute-binding protein CTU_12480 PF00528 Binding-protein-dependent transport system inner membrane component CTU_12490 PF00528 Binding-protein-dependent transport system inner membrane component CTU_12500 PF00005 ABC transporter CTU_12500 PF08402 TOBE domain CTU_12510 PF00128 Alpha amylase, catalytic domain CTU_12510 PF16657 Maltogenic Amylase, C-terminal domain CTU_12520 PF16657 Maltogenic Amylase, C-terminal domain CTU_12520 PF00128 Alpha amylase, catalytic domain CTU_12540 PF00445 Ribonuclease T2 family CTU_12550 PF03606 C4-dicarboxylate anaerobic carrier CTU_12560 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CTU_12570 PF00313 'Cold-shock' DNA-binding domain CTU_12580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CTU_12590 PF00795 Carbon-nitrogen hydrolase CTU_12600 PF02416 mttA/Hcf106 family CTU_12610 PF04055 Radical SAM superfamily CTU_12610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CTU_12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_12620 PF03466 LysR substrate binding domain CTU_12630 PF03099 Biotin/lipoate A/B protein ligase family CTU_12640 PF04359 Protein of unknown function (DUF493) CTU_12650 PF00768 D-alanyl-D-alanine carboxypeptidase CTU_12650 PF07943 Penicillin-binding protein 5, C-terminal domain CTU_12660 PF03330 Lytic transglycolase CTU_12660 PF05036 Sporulation related domain CTU_12670 PF01098 Cell cycle protein CTU_12680 PF00905 Penicillin binding protein transpeptidase domain CTU_12680 PF03717 Penicillin-binding Protein dimerisation domain CTU_12690 PF02590 Predicted SPOUT methyltransferase CTU_12710 PF00300 Histidine phosphatase superfamily (branch 1) CTU_12720 PF01467 Cytidylyltransferase-like CTU_12730 PF06144 DNA polymerase III, delta subunit CTU_12730 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CTU_12740 PF04390 Lipopolysaccharide-assembly CTU_12750 PF00133 tRNA synthetases class I (I, L, M and V) CTU_12750 PF08264 Anticodon-binding domain of tRNA CTU_12750 PF13603 Leucyl-tRNA synthetase, Domain 2 CTU_12760 PF07295 Zinc-ribbon containing domain CTU_12770 PF00005 ABC transporter CTU_12780 PF00528 Binding-protein-dependent transport system inner membrane component CTU_12790 PF00528 Binding-protein-dependent transport system inner membrane component CTU_12800 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_12810 PF00795 Carbon-nitrogen hydrolase CTU_12820 PF03471 Transporter associated domain CTU_12820 PF00571 CBS domain CTU_12830 PF02130 Uncharacterized protein family UPF0054 CTU_12840 PF02562 PhoH-like protein CTU_12860 PF01938 TRAM domain CTU_12860 PF04055 Radical SAM superfamily CTU_12860 PF00919 Uncharacterized protein family UPF0004 CTU_12870 PF01494 FAD binding domain CTU_12880 PF00733 Asparagine synthase CTU_12880 PF13537 Glutamine amidotransferase domain CTU_12890 PF13344 Haloacid dehalogenase-like hydrolase CTU_12900 PF00480 ROK family CTU_12900 PF01047 MarR family CTU_12910 PF01979 Amidohydrolase family CTU_12920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CTU_12940 PF00367 phosphotransferase system, EIIB CTU_12940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CTU_12940 PF02378 Phosphotransferase system, EIIC CTU_12960 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTU_12960 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CTU_12980 PF03573 outer membrane porin, OprD family CTU_12990 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CTU_12990 PF03173 Putative carbohydrate binding domain CTU_12990 PF02838 Glycosyl hydrolase family 20, domain 2 CTU_12990 PF00728 Glycosyl hydrolase family 20, catalytic domain CTU_13010 PF01475 Ferric uptake regulator family CTU_13020 PF00258 Flavodoxin CTU_13030 PF01402 Ribbon-helix-helix protein, copG family CTU_13040 PF12697 Alpha/beta hydrolase family CTU_13050 PF17206 SeqA protein N-terminal domain CTU_13050 PF03925 SeqA protein C-terminal domain CTU_13060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTU_13060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTU_13060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTU_13060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTU_13070 PF13520 Amino acid permease CTU_13080 PF01276 Orn/Lys/Arg decarboxylase, major domain CTU_13080 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CTU_13080 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CTU_13100 PF00072 Response regulator receiver domain CTU_13100 PF00486 Transcriptional regulatory protein, C terminal CTU_13110 PF02702 Osmosensitive K+ channel His kinase sensor domain CTU_13110 PF13493 Domain of unknown function (DUF4118) CTU_13110 PF13492 GAF domain CTU_13110 PF00512 His Kinase A (phospho-acceptor) domain CTU_13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_13120 PF02669 K+-transporting ATPase, c chain CTU_13140 PF03814 Potassium-transporting ATPase A subunit CTU_13150 PF10725 Protein of unknown function (DUF2517) CTU_13160 PF08349 Protein of unknown function (DUF1722) CTU_13170 PF00875 DNA photolyase CTU_13170 PF03441 FAD binding domain of DNA photolyase CTU_13180 PF01784 NIF3 (NGG1p interacting factor 3) CTU_13190 PF02682 Carboxyltransferase domain, subdomain C and D CTU_13200 PF02626 Carboxyltransferase domain, subdomain A and B CTU_13210 PF03746 LamB/YcsF family CTU_13260 PF06827 Zinc finger found in FPG and IleRS CTU_13260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CTU_13260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CTU_13270 PF00285 Citrate synthase, C-terminal domain CTU_13280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CTU_13290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CTU_13300 PF00890 FAD binding domain CTU_13300 PF02910 Fumarate reductase flavoprotein C-term CTU_13310 PF13085 2Fe-2S iron-sulfur cluster binding domain CTU_13320 PF16078 2-oxoglutarate dehydrogenase N-terminus CTU_13320 PF00676 Dehydrogenase E1 component CTU_13320 PF16870 2-oxoglutarate dehydrogenase C-terminal CTU_13320 PF02779 Transketolase, pyrimidine binding domain CTU_13330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CTU_13330 PF00364 Biotin-requiring enzyme CTU_13330 PF02817 e3 binding domain CTU_13340 PF08442 ATP-grasp domain CTU_13340 PF00549 CoA-ligase CTU_13350 PF00549 CoA-ligase CTU_13350 PF02629 CoA binding domain CTU_13360 PF07702 UTRA domain CTU_13360 PF00392 Bacterial regulatory proteins, gntR family CTU_13370 PF02378 Phosphotransferase system, EIIC CTU_13370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CTU_13370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTU_13380 PF09261 Alpha mannosidase middle domain CTU_13380 PF07748 Glycosyl hydrolases family 38 C-terminal domain CTU_13380 PF01074 Glycosyl hydrolases family 38 N-terminal domain CTU_13390 PF01654 Cytochrome bd terminal oxidase subunit I CTU_13400 PF02322 Cytochrome bd terminal oxidase subunit II CTU_13410 PF08173 Membrane bound YbgT-like protein CTU_13420 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CTU_13430 PF03061 Thioesterase superfamily CTU_13440 PF01618 MotA/TolQ/ExbB proton channel family CTU_13450 PF02472 Biopolymer transport protein ExbD/TolR CTU_13460 PF06519 TolA C-terminal CTU_13470 PF04052 TolB amino-terminal domain CTU_13470 PF07676 WD40-like Beta Propeller Repeat CTU_13480 PF00691 OmpA family CTU_13490 PF16331 TolA binding protein trimerisation CTU_13490 PF13174 Tetratricopeptide repeat CTU_13500 PF02445 Quinolinate synthetase A protein CTU_13510 PF04973 Nicotinamide mononucleotide transporter CTU_13520 PF01545 Cation efflux family CTU_13540 PF00793 DAHP synthetase I family CTU_13550 PF00300 Histidine phosphatase superfamily (branch 1) CTU_13560 PF01263 Aldose 1-epimerase CTU_13570 PF00288 GHMP kinases N terminal domain CTU_13570 PF08544 GHMP kinases C terminal CTU_13570 PF10509 Galactokinase galactose-binding signature CTU_13580 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CTU_13580 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CTU_13590 PF16363 GDP-mannose 4,6 dehydratase CTU_13600 PF00005 ABC transporter CTU_13610 PF03459 TOBE domain CTU_13610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_13620 PF10766 Multidrug efflux pump-associated protein AcrZ CTU_13640 PF00528 Binding-protein-dependent transport system inner membrane component CTU_13650 PF03459 TOBE domain CTU_13650 PF00005 ABC transporter CTU_13670 PF10282 Lactonase, 7-bladed beta-propeller CTU_13680 PF01095 Pectinesterase CTU_13690 PF01161 Phosphatidylethanolamine-binding protein CTU_13710 PF00202 Aminotransferase class-III CTU_13720 PF04055 Radical SAM superfamily CTU_13720 PF06968 Biotin and Thiamin Synthesis associated domain CTU_13730 PF00155 Aminotransferase class I and II CTU_13740 PF08241 Methyltransferase domain CTU_13760 PF00005 ABC transporter CTU_13780 PF17757 UvrB interaction domain CTU_13780 PF04851 Type III restriction enzyme, res subunit CTU_13780 PF00271 Helicase conserved C-terminal domain CTU_13780 PF12344 Ultra-violet resistance protein B CTU_13780 PF02151 UvrB/uvrC motif CTU_13790 PF01933 Uncharacterised protein family UPF0052 CTU_13810 PF04055 Radical SAM superfamily CTU_13810 PF06463 Molybdenum Cofactor Synthesis C CTU_13820 PF00994 Probable molybdopterin binding domain CTU_13830 PF01967 MoaC family CTU_13840 PF02597 ThiS family CTU_13850 PF02391 MoaE protein CTU_13860 PF01027 Inhibitor of apoptosis-promoting Bax1 CTU_13870 PF03706 Lysylphosphatidylglycerol synthase TM region CTU_13880 PF13091 PLD-like domain CTU_13890 PF03372 Endonuclease/Exonuclease/phosphatase family CTU_13900 PF11076 Putative inner membrane protein YbhQ CTU_13930 PF00005 ABC transporter CTU_13940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_13950 PF09209 Tetracyclin repressor-like, C-terminal domain CTU_13950 PF00440 Bacterial regulatory proteins, tetR family CTU_13960 PF00270 DEAD/DEAH box helicase CTU_13960 PF00271 Helicase conserved C-terminal domain CTU_13980 PF06733 DEAD_2 CTU_13980 PF13307 Helicase C-terminal domain CTU_14010 PF00577 Outer membrane usher protein CTU_14010 PF13953 PapC C-terminal domain CTU_14010 PF13954 PapC N-terminal domain CTU_14020 PF02753 Pili assembly chaperone PapD, C-terminal domain CTU_14020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTU_14030 PF00419 Fimbrial protein CTU_14040 PF02885 Glycosyl transferase family, helical bundle domain CTU_14050 PF07338 Protein of unknown function (DUF1471) CTU_14060 PF01258 Prokaryotic dksA/traR C4-type zinc finger CTU_14070 PF01613 Flavin reductase like domain CTU_14080 PF05971 RNA methyltransferase CTU_14090 PF00924 Mechanosensitive ion channel CTU_14100 PF00005 ABC transporter CTU_14110 PF00528 Binding-protein-dependent transport system inner membrane component CTU_14120 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_14130 PF00210 Ferritin-like domain CTU_14140 PF00892 EamA-like transporter family CTU_14160 PF13505 Outer membrane protein beta-barrel domain CTU_14170 PF00884 Sulfatase CTU_14190 PF02742 Iron dependent repressor, metal binding and dimerisation domain CTU_14190 PF01325 Iron dependent repressor, N-terminal DNA binding domain CTU_14200 PF03600 Citrate transporter CTU_14210 PF07690 Major Facilitator Superfamily CTU_14220 PF02321 Outer membrane efflux protein CTU_14230 PF00232 Glycosyl hydrolase family 1 CTU_14240 PF02378 Phosphotransferase system, EIIC CTU_14250 PF07702 UTRA domain CTU_14250 PF00392 Bacterial regulatory proteins, gntR family CTU_14260 PF03734 L,D-transpeptidase catalytic domain CTU_14260 PF17969 L,D-transpeptidase C-terminal domain CTU_14270 PF00005 ABC transporter CTU_14270 PF12848 ABC transporter CTU_14280 PF04829 Pre-toxin domain with VENN motif CTU_14280 PF05860 haemagglutination activity domain CTU_14280 PF13332 Hemagglutinin repeat CTU_14280 PF13018 Extended Signal Peptide of Type V secretion system CTU_14290 PF01055 Glycosyl hydrolases family 31 CTU_14290 PF16338 Domain of unknown function (DUF4968) CTU_14290 PF13802 Galactose mutarotase-like CTU_14290 PF17137 Domain of unknown function (DUF5110) CTU_14300 PF07690 Major Facilitator Superfamily CTU_14310 PF00356 Bacterial regulatory proteins, lacI family CTU_14320 PF00899 ThiF family CTU_14330 PF03454 MoeA C-terminal region (domain IV) CTU_14330 PF03453 MoeA N-terminal region (domain I and II) CTU_14330 PF00994 Probable molybdopterin binding domain CTU_14340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_14340 PF00005 ABC transporter CTU_14350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_14360 PF00528 Binding-protein-dependent transport system inner membrane component CTU_14370 PF12911 N-terminal TM domain of oligopeptide transport permease C CTU_14370 PF00528 Binding-protein-dependent transport system inner membrane component CTU_14380 PF04055 Radical SAM superfamily CTU_14380 PF18693 TRAM domain CTU_14380 PF00919 Uncharacterized protein family UPF0004 CTU_14390 PF07995 Glucose / Sorbosone dehydrogenase CTU_14400 PF13417 Glutathione S-transferase, N-terminal domain CTU_14400 PF00043 Glutathione S-transferase, C-terminal domain CTU_14410 PF07943 Penicillin-binding protein 5, C-terminal domain CTU_14410 PF00768 D-alanyl-D-alanine carboxypeptidase CTU_14420 PF08220 DeoR-like helix-turn-helix domain CTU_14420 PF00455 DeoR C terminal sensor domain CTU_14430 PF01569 PAP2 superfamily CTU_14450 PF07690 Major Facilitator Superfamily CTU_14470 PF00669 Bacterial flagellin N-terminal helical region CTU_14470 PF00700 Bacterial flagellin C-terminal helical region CTU_14470 PF08884 Flagellin D3 domain CTU_14480 PF07690 Major Facilitator Superfamily CTU_14490 PF00440 Bacterial regulatory proteins, tetR family CTU_14570 PF06826 Predicted Permease Membrane Region CTU_14570 PF02080 TrkA-C domain CTU_14580 PF11045 Putative inner membrane protein of Enterobacteriaceae CTU_14590 PF00881 Nitroreductase family CTU_14600 PF18030 RimK PreATP-grasp domain CTU_14600 PF08443 RimK-like ATP-grasp domain CTU_14610 PF10722 Putative bacterial sensory transduction regulator CTU_14620 PF13416 Bacterial extracellular solute-binding protein CTU_14630 PF08402 TOBE domain CTU_14630 PF00005 ABC transporter CTU_14640 PF00528 Binding-protein-dependent transport system inner membrane component CTU_14650 PF00528 Binding-protein-dependent transport system inner membrane component CTU_14660 PF10767 Protein of unknown function (DUF2593) CTU_14670 PF05958 tRNA (Uracil-5-)-methyltransferase CTU_14680 PF07470 Glycosyl Hydrolase Family 88 CTU_14690 PF01306 LacY proton/sugar symporter CTU_14720 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_14730 PF00528 Binding-protein-dependent transport system inner membrane component CTU_14740 PF00528 Binding-protein-dependent transport system inner membrane component CTU_14750 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_14760 PF00005 ABC transporter CTU_14770 PF12883 Protein of unknown function (DUF3828) CTU_14780 PF01906 Putative heavy-metal-binding CTU_14790 PF01510 N-acetylmuramoyl-L-alanine amidase CTU_14800 PF01370 NAD dependent epimerase/dehydratase family CTU_14810 PF01212 Beta-eliminating lyase CTU_14820 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_14820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_14820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_14830 PF00111 2Fe-2S iron-sulfur cluster binding domain CTU_14830 PF00175 Oxidoreductase NAD-binding domain CTU_14830 PF00970 Oxidoreductase FAD-binding domain CTU_14840 PF03063 Prismane/CO dehydrogenase family CTU_14850 PF03956 Lysine exporter LysO CTU_14860 PF11398 Protein of unknown function (DUF2813) CTU_14870 PF04393 Protein of unknown function (DUF535) CTU_14880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_14890 PF02687 FtsX-like permease family CTU_14890 PF00005 ABC transporter CTU_14890 PF12704 MacB-like periplasmic core domain CTU_14900 PF00313 'Cold-shock' DNA-binding domain CTU_14910 PF02617 ATP-dependent Clp protease adaptor protein ClpS CTU_14920 PF00004 ATPase family associated with various cellular activities (AAA) CTU_14920 PF07724 AAA domain (Cdc48 subfamily) CTU_14920 PF10431 C-terminal, D2-small domain, of ClpB protein CTU_14920 PF02861 Clp amino terminal domain, pathogenicity island component CTU_14920 PF17871 AAA lid domain CTU_14940 PF01176 Translation initiation factor 1A / IF-1 CTU_14960 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CTU_14970 PF00005 ABC transporter CTU_14970 PF00664 ABC transporter transmembrane region CTU_14980 PF00664 ABC transporter transmembrane region CTU_14980 PF00005 ABC transporter CTU_14990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_15010 PF01037 Lrp/AsnC ligand binding domain CTU_15020 PF09397 Ftsk gamma domain CTU_15020 PF17854 FtsK alpha domain CTU_15020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CTU_15020 PF01580 FtsK/SpoIIIE family CTU_15030 PF03548 Outer membrane lipoprotein carrier protein LolA CTU_15040 PF12002 MgsA AAA+ ATPase C terminal CTU_15040 PF16193 AAA C-terminal domain CTU_15040 PF00004 ATPase family associated with various cellular activities (AAA) CTU_15050 PF02403 Seryl-tRNA synthetase N-terminal domain CTU_15050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTU_15060 PF07690 Major Facilitator Superfamily CTU_15070 PF04055 Radical SAM superfamily CTU_15080 PF02901 Pyruvate formate lyase-like CTU_15080 PF01228 Glycine radical CTU_15090 PF01226 Formate/nitrite transporter CTU_15110 PF18381 YcaO cyclodehydratase C-terminal domain CTU_15110 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CTU_15120 PF04239 Protein of unknown function (DUF421) CTU_15130 PF00266 Aminotransferase class-V CTU_15140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTU_15150 PF01435 Peptidase family M48 CTU_15160 PF02224 Cytidylate kinase CTU_15170 PF00575 S1 RNA binding domain CTU_15180 PF00216 Bacterial DNA-binding protein CTU_15190 PF03772 Competence protein CTU_15190 PF00753 Metallo-beta-lactamase superfamily CTU_15200 PF00005 ABC transporter CTU_15200 PF00664 ABC transporter transmembrane region CTU_15210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CTU_15220 PF06224 Winged helix DNA-binding domain CTU_15230 PF03966 Trm112p-like protein CTU_15240 PF02348 Cytidylyltransferase CTU_15250 PF01037 Lrp/AsnC ligand binding domain CTU_15250 PF13404 AsnC-type helix-turn-helix domain CTU_15270 PF01636 Phosphotransferase enzyme family CTU_15280 PF02698 DUF218 domain CTU_15300 PF17192 MukF middle domain CTU_15300 PF03882 MukF winged-helix domain CTU_15300 PF17193 MukF C-terminal domain CTU_15310 PF04288 MukE-like family CTU_15320 PF16330 MukB hinge domain CTU_15320 PF04310 MukB N-terminal CTU_15330 PF01471 Putative peptidoglycan binding domain CTU_15330 PF03734 L,D-transpeptidase catalytic domain CTU_15340 PF05951 Bacterial protein of unknown function (DUF882) CTU_15350 PF00753 Metallo-beta-lactamase superfamily CTU_15360 PF00155 Aminotransferase class I and II CTU_15370 PF00267 Gram-negative porin CTU_15380 PF00152 tRNA synthetases class II (D, K and N) CTU_15380 PF01336 OB-fold nucleic acid binding domain CTU_15390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CTU_15390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CTU_15420 PF04542 Sigma-70 region 2 CTU_15420 PF08281 Sigma-70, region 4 CTU_15440 PF00199 Catalase CTU_15450 PF01433 Peptidase family M1 domain CTU_15450 PF11940 Domain of unknown function (DUF3458) Ig-like fold CTU_15450 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CTU_15460 PF00005 ABC transporter CTU_15470 PF00528 Binding-protein-dependent transport system inner membrane component CTU_15480 PF00296 Luciferase-like monooxygenase CTU_15490 PF09084 NMT1/THI5 like CTU_15500 PF03358 NADPH-dependent FMN reductase CTU_15510 PF01180 Dihydroorotate dehydrogenase CTU_15520 PF07126 Cell-division protein ZapC CTU_15530 PF03476 MOSC N-terminal beta barrel domain CTU_15530 PF00111 2Fe-2S iron-sulfur cluster binding domain CTU_15530 PF03473 MOSC domain CTU_15540 PF10672 S-adenosylmethionine-dependent methyltransferase CTU_15540 PF02926 THUMP domain CTU_15540 PF01170 Putative RNA methylase family UPF0020 CTU_15550 PF00005 ABC transporter CTU_15550 PF12848 ABC transporter CTU_15550 PF16326 ABC transporter C-terminal domain CTU_15560 PF04403 Paraquat-inducible protein A CTU_15570 PF02470 MlaD protein CTU_15580 PF03886 ABC-type transport auxiliary lipoprotein component CTU_15590 PF04957 Ribosome modulation factor CTU_15600 PF07977 FabA-like domain CTU_15610 PF05362 Lon protease (S16) C-terminal proteolytic domain CTU_15610 PF13654 AAA domain CTU_15620 PF06303 MatP N-terminal domain CTU_15620 PF17414 MatP C-terminal ribbon-helix-helix domain CTU_15640 PF00691 OmpA family CTU_15640 PF01389 OmpA-like transmembrane domain CTU_15660 PF03846 Cell division inhibitor SulA CTU_15670 PF04994 TfoX C-terminal domain CTU_15670 PF04993 TfoX N-terminal domain CTU_15680 PF12805 FUSC-like inner membrane protein yccS CTU_15690 PF03733 Inner membrane component domain CTU_15710 PF00580 UvrD/REP helicase N-terminal domain CTU_15710 PF13361 UvrD-like helicase C-terminal domain CTU_15710 PF12462 DNA helicase IV / RNA helicase N terminal CTU_15720 PF02142 MGS-like domain CTU_15730 PF13380 CoA binding domain CTU_15740 PF08755 Hemimethylated DNA-binding protein YccV like CTU_15750 PF17785 PUA-like domain CTU_15750 PF10672 S-adenosylmethionine-dependent methyltransferase CTU_15760 PF00708 Acylphosphatase CTU_15770 PF04358 DsrC like protein CTU_15780 PF01027 Inhibitor of apoptosis-promoting Bax1 CTU_15790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_15830 PF13993 YccJ-like protein CTU_15840 PF03358 NADPH-dependent FMN reductase CTU_15870 PF00860 Permease family CTU_15880 PF01613 Flavin reductase like domain CTU_15890 PF00881 Nitroreductase family CTU_15900 PF12146 Serine aminopeptidase, S33 CTU_15910 PF01042 Endoribonuclease L-PSP CTU_15920 PF00857 Isochorismatase family CTU_15930 PF00296 Luciferase-like monooxygenase CTU_15940 PF08362 YcdC-like protein, C-terminal region CTU_15940 PF00440 Bacterial regulatory proteins, tetR family CTU_15970 PF00171 Aldehyde dehydrogenase family CTU_15970 PF01619 Proline dehydrogenase CTU_15970 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CTU_15970 PF14850 DNA-binding domain of Proline dehydrogenase CTU_15990 PF00474 Sodium:solute symporter family CTU_16010 PF01773 Na+ dependent nucleoside transporter N-terminus CTU_16010 PF07662 Na+ dependent nucleoside transporter C-terminus CTU_16010 PF07670 Nucleoside recognition CTU_16020 PF03239 Iron permease FTR1 family CTU_16030 PF13473 Cupredoxin-like domain CTU_16030 PF09375 Imelysin CTU_16040 PF04261 Dyp-type peroxidase family CTU_16050 PF02562 PhoH-like protein CTU_16070 PF00384 Molybdopterin oxidoreductase CTU_16090 PF02753 Pili assembly chaperone PapD, C-terminal domain CTU_16090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTU_16100 PF00577 Outer membrane usher protein CTU_16100 PF13954 PapC N-terminal domain CTU_16100 PF13953 PapC C-terminal domain CTU_16110 PF00419 Fimbrial protein CTU_16120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTU_16130 PF02811 PHP domain CTU_16140 PF02613 Nitrate reductase delta subunit CTU_16150 PF06496 Protein of unknown function (DUF1097) CTU_16160 PF03783 Curli production assembly/transport component CsgG CTU_16170 PF10614 Type VIII secretion system (T8SS), CsgF protein CTU_16180 PF10627 Curli assembly protein CsgE CTU_16190 PF00196 Bacterial regulatory proteins, luxR family CTU_16200 PF07012 Curlin associated repeat CTU_16240 PF01661 Macro domain CTU_16250 PF13091 PLD-like domain CTU_16260 PF01757 Acyltransferase family CTU_16270 PF04349 Periplasmic glucan biosynthesis protein, MdoG CTU_16280 PF00535 Glycosyl transferase family 2 CTU_16290 PF07119 Protein of unknown function (DUF1375) CTU_16300 PF13984 MsyB protein CTU_16310 PF03279 Bacterial lipid A biosynthesis acyltransferase CTU_16340 PF04264 YceI-like domain CTU_16350 PF01292 Prokaryotic cytochrome b561 CTU_16360 PF01266 FAD dependent oxidoreductase CTU_16370 PF13991 BssS protein family CTU_16380 PF06183 DinI-like family CTU_16390 PF01979 Amidohydrolase family CTU_16400 PF07273 Protein of unknown function (DUF1439) CTU_16410 PF13417 Glutathione S-transferase, N-terminal domain CTU_16410 PF04399 Glutaredoxin 2, C terminal domain CTU_16420 PF07690 Major Facilitator Superfamily CTU_16430 PF13302 Acetyltransferase (GNAT) domain CTU_16440 PF04337 Protein of unknown function, DUF480 CTU_16450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTU_16460 PF03023 Lipid II flippase MurJ CTU_16470 PF05130 FlgN protein CTU_16480 PF04316 Anti-sigma-28 factor, FlgM CTU_16490 PF13144 Chaperone for flagella basal body P-ring formation CTU_16500 PF00460 Flagella basal body rod protein CTU_16510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTU_16510 PF00460 Flagella basal body rod protein CTU_16520 PF03963 Flagellar hook capping protein - N-terminal region CTU_16520 PF13860 FlgD Ig-like domain CTU_16520 PF13861 FlgD Tudor-like domain CTU_16530 PF07559 Flagellar basal body protein FlaE CTU_16530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTU_16530 PF00460 Flagella basal body rod protein CTU_16540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTU_16540 PF00460 Flagella basal body rod protein CTU_16550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTU_16550 PF00460 Flagella basal body rod protein CTU_16560 PF02107 Flagellar L-ring protein CTU_16570 PF02119 Flagellar P-ring protein CTU_16580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CTU_16580 PF10135 Rod binding protein CTU_16590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTU_16590 PF00460 Flagella basal body rod protein CTU_16600 PF00669 Bacterial flagellin N-terminal helical region CTU_16610 PF07690 Major Facilitator Superfamily CTU_16620 PF03466 LysR substrate binding domain CTU_16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_16630 PF12111 Polyribonucleotide phosphorylase C terminal CTU_16630 PF10150 Ribonuclease E/G family CTU_16630 PF00575 S1 RNA binding domain CTU_16640 PF00849 RNA pseudouridylate synthase CTU_16640 PF01479 S4 domain CTU_16650 PF11254 Protein of unknown function (DUF3053) CTU_16660 PF02545 Maf-like protein CTU_16670 PF02620 Large ribosomal RNA subunit accumulation protein YceD CTU_16680 PF01783 Ribosomal L32p protein family CTU_16690 PF02504 Fatty acid synthesis protein CTU_16700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CTU_16700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CTU_16710 PF00698 Acyl transferase domain CTU_16730 PF00550 Phosphopantetheine attachment site CTU_16740 PF00109 Beta-ketoacyl synthase, N-terminal domain CTU_16740 PF02801 Beta-ketoacyl synthase, C-terminal domain CTU_16750 PF01063 Amino-transferase class IV CTU_16760 PF02618 YceG-like family CTU_16770 PF02223 Thymidylate kinase CTU_16780 PF09115 DNA polymerase III, delta subunit, C terminal CTU_16790 PF01026 TatD related DNase CTU_16800 PF00367 phosphotransferase system, EIIB CTU_16800 PF02378 Phosphotransferase system, EIIC CTU_16810 PF00593 TonB dependent receptor CTU_16810 PF07715 TonB-dependent Receptor Plug Domain CTU_16820 PF01230 HIT domain CTU_16830 PF07233 Protein of unknown function (DUF1425) CTU_16840 PF13036 Peptidoglycan-synthase activator LpoB CTU_16850 PF01636 Phosphotransferase enzyme family CTU_16860 PF00933 Glycosyl hydrolase family 3 N terminal domain CTU_16870 PF05728 Uncharacterised protein family (UPF0227) CTU_16880 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_16890 PF05433 Glycine zipper 2TM domain CTU_16910 PF00440 Bacterial regulatory proteins, tetR family CTU_16920 PF07338 Protein of unknown function (DUF1471) CTU_16930 PF01476 LysM domain CTU_16930 PF17969 L,D-transpeptidase C-terminal domain CTU_16930 PF03734 L,D-transpeptidase catalytic domain CTU_16940 PF17757 UvrB interaction domain CTU_16940 PF00271 Helicase conserved C-terminal domain CTU_16940 PF02559 CarD-like/TRCF domain CTU_16940 PF03461 TRCF domain CTU_16940 PF00270 DEAD/DEAH box helicase CTU_16950 PF12704 MacB-like periplasmic core domain CTU_16950 PF02687 FtsX-like permease family CTU_16960 PF00005 ABC transporter CTU_16970 PF02687 FtsX-like permease family CTU_16970 PF12704 MacB-like periplasmic core domain CTU_16980 PF00480 ROK family CTU_16990 PF02146 Sir2 family CTU_17000 PF13416 Bacterial extracellular solute-binding protein CTU_17010 PF00528 Binding-protein-dependent transport system inner membrane component CTU_17020 PF00528 Binding-protein-dependent transport system inner membrane component CTU_17030 PF00005 ABC transporter CTU_17030 PF08402 TOBE domain CTU_17040 PF07687 Peptidase dimerisation domain CTU_17040 PF01546 Peptidase family M20/M25/M40 CTU_17050 PF08007 Cupin superfamily protein CTU_17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_17060 PF08918 PhoQ Sensor CTU_17070 PF00486 Transcriptional regulatory protein, C terminal CTU_17070 PF00072 Response regulator receiver domain CTU_17080 PF00206 Lyase CTU_17080 PF08328 Adenylosuccinate lyase C-terminal CTU_17090 PF04356 Protein of unknown function (DUF489) CTU_17110 PF00672 HAMP domain CTU_17110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_17120 PF00293 NUDIX domain CTU_17130 PF00849 RNA pseudouridylate synthase CTU_17140 PF00180 Isocitrate/isopropylmalate dehydrogenase CTU_17160 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CTU_17160 PF00589 Phage integrase family CTU_17230 PF03354 Phage Terminase CTU_17250 PF05869 DNA N-6-adenine-methyltransferase (Dam) CTU_17260 PF00717 Peptidase S24-like CTU_17260 PF01726 LexA DNA binding domain CTU_17280 PF05866 Endodeoxyribonuclease RusA CTU_17290 PF09669 Phage regulatory protein Rha (Phage_pRha) CTU_17290 PF03374 Phage antirepressor protein KilAC domain CTU_17300 PF06147 Protein of unknown function (DUF968) CTU_17310 PF03589 Antitermination protein CTU_17360 PF00182 Chitinase class I CTU_17370 PF03245 Bacteriophage Rz lysis protein CTU_17440 PF03354 Phage Terminase CTU_17450 PF04860 Phage portal protein CTU_17460 PF00574 Clp protease CTU_17650 PF00717 Peptidase S24-like CTU_17660 PF13438 Domain of unknown function (DUF4113) CTU_17660 PF11798 IMS family HHH motif CTU_17660 PF11799 impB/mucB/samB family C-terminal domain CTU_17660 PF00817 impB/mucB/samB family CTU_17670 PF13676 TIR domain CTU_17690 PF00180 Isocitrate/isopropylmalate dehydrogenase CTU_17710 PF13460 NAD(P)H-binding CTU_17720 PF11798 IMS family HHH motif CTU_17720 PF13438 Domain of unknown function (DUF4113) CTU_17720 PF00817 impB/mucB/samB family CTU_17720 PF11799 impB/mucB/samB family C-terminal domain CTU_17780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_17780 PF00672 HAMP domain CTU_17780 PF02203 Tar ligand binding domain homologue CTU_17810 PF02677 Epoxyqueuosine reductase QueH CTU_17820 PF00313 'Cold-shock' DNA-binding domain CTU_17860 PF01584 CheW-like domain CTU_17860 PF00072 Response regulator receiver domain CTU_17890 PF04393 Protein of unknown function (DUF535) CTU_17920 PF04343 Protein of unknown function, DUF488 CTU_17930 PF00117 Glutamine amidotransferase class-I CTU_17930 PF06418 CTP synthase N-terminus CTU_17940 PF07690 Major Facilitator Superfamily CTU_17950 PF04284 Protein of unknown function (DUF441) CTU_17960 PF04073 Aminoacyl-tRNA editing domain CTU_17970 PF10685 Stress-induced bacterial acidophilic repeat motif CTU_17980 PF12792 CSS motif domain associated with EAL CTU_17980 PF00563 EAL domain CTU_17990 PF04285 Protein of unknown function (DUF444) CTU_18000 PF08298 PrkA AAA domain CTU_18000 PF06798 PrkA serine protein kinase C-terminal domain CTU_18010 PF06629 MltA-interacting protein MipA CTU_18020 PF01263 Aldose 1-epimerase CTU_18030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTU_18030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CTU_18040 PF01641 SelR domain CTU_18050 PF07023 Protein of unknown function (DUF1315) CTU_18060 PF00857 Isochorismatase family CTU_18070 PF17763 Glutaminase/Asparaginase C-terminal domain CTU_18070 PF00710 Asparaginase, N-terminal CTU_18080 PF01343 Peptidase family S49 CTU_18090 PF00881 Nitroreductase family CTU_18100 PF02769 AIR synthase related protein, C-terminal domain CTU_18100 PF00586 AIR synthase related protein, N-terminal domain CTU_18110 PF01131 DNA topoisomerase CTU_18110 PF01751 Toprim domain CTU_18120 PF07383 Protein of unknown function (DUF1496) CTU_18130 PF00293 NUDIX domain CTU_18140 PF03372 Endonuclease/Exonuclease/phosphatase family CTU_18160 PF00202 Aminotransferase class-III CTU_18170 PF04958 Arginine N-succinyltransferase beta subunit CTU_18180 PF00171 Aldehyde dehydrogenase family CTU_18190 PF04996 Succinylarginine dihydrolase CTU_18200 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CTU_18210 PF07813 LTXXQ motif family protein CTU_18220 PF05962 HutD CTU_18240 PF00892 EamA-like transporter family CTU_18250 PF02540 NAD synthase CTU_18260 PF04355 SmpA / OmlA family CTU_18270 PF00199 Catalase CTU_18270 PF06628 Catalase-related immune-responsive CTU_18270 PF18011 C-terminal domain found in long catalases CTU_18280 PF10729 Cell division activator CedA CTU_18300 PF04307 LexA-binding, inner membrane-associated putative hydrolase CTU_18320 PF13419 Haloacid dehalogenase-like hydrolase CTU_18330 PF14002 YniB-like protein CTU_18350 PF11080 Endoribonuclease GhoS CTU_18360 PF00294 pfkB family carbohydrate kinase CTU_18370 PF04338 Protein of unknown function, DUF481 CTU_18390 PF00083 Sugar (and other) transporter CTU_18390 PF08946 Osmosensory transporter coiled coil CTU_18410 PF03974 Ecotin CTU_18430 PF07859 alpha/beta hydrolase fold CTU_18450 PF02824 TGS domain CTU_18450 PF03129 Anticodon binding domain CTU_18450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTU_18450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTU_18460 PF05198 Translation initiation factor IF-3, N-terminal domain CTU_18460 PF00707 Translation initiation factor IF-3, C-terminal domain CTU_18470 PF01632 Ribosomal protein L35 CTU_18480 PF00453 Ribosomal protein L20 CTU_18490 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CTU_18490 PF01409 tRNA synthetases class II core domain (F) CTU_18500 PF01588 Putative tRNA binding domain CTU_18500 PF03483 B3/4 domain CTU_18500 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CTU_18500 PF03147 Ferredoxin-fold anticodon binding domain CTU_18500 PF03484 tRNA synthetase B5 domain CTU_18510 PF00216 Bacterial DNA-binding protein CTU_18520 PF01032 FecCD transport family CTU_18530 PF00255 Glutathione peroxidase CTU_18540 PF00005 ABC transporter CTU_18550 PF00877 NlpC/P60 family CTU_18560 PF02378 Phosphotransferase system, EIIC CTU_18570 PF11975 Family 4 glycosyl hydrolase C-terminal domain CTU_18570 PF02056 Family 4 glycosyl hydrolase CTU_18580 PF00356 Bacterial regulatory proteins, lacI family CTU_18590 PF00563 EAL domain CTU_18600 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CTU_18610 PF00793 DAHP synthetase I family CTU_18620 PF03618 Kinase/pyrophosphorylase CTU_18640 PF00391 PEP-utilising enzyme, mobile domain CTU_18640 PF02896 PEP-utilising enzyme, TIM barrel domain CTU_18640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CTU_18660 PF14310 Fibronectin type III-like domain CTU_18660 PF01915 Glycosyl hydrolase family 3 C-terminal domain CTU_18660 PF00933 Glycosyl hydrolase family 3 N terminal domain CTU_18670 PF01594 AI-2E family transporter CTU_18680 PF01565 FAD binding domain CTU_18680 PF02913 FAD linked oxidases, C-terminal domain CTU_18680 PF13183 4Fe-4S dicluster domain CTU_18690 PF03061 Thioesterase superfamily CTU_18700 PF00328 Histidine phosphatase superfamily (branch 2) CTU_18710 PF01521 Iron-sulphur cluster biosynthesis CTU_18720 PF01458 Uncharacterized protein family (UPF0051) CTU_18730 PF00005 ABC transporter CTU_18740 PF01458 Uncharacterized protein family (UPF0051) CTU_18750 PF00266 Aminotransferase class-V CTU_18760 PF02657 Fe-S metabolism associated domain CTU_18770 PF01476 LysM domain CTU_18770 PF17969 L,D-transpeptidase C-terminal domain CTU_18770 PF03734 L,D-transpeptidase catalytic domain CTU_18780 PF04728 Lipoprotein leucine-zipper CTU_18790 PF00224 Pyruvate kinase, barrel domain CTU_18790 PF02887 Pyruvate kinase, alpha/beta domain CTU_18800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CTU_18810 PF03797 Autotransporter beta-domain CTU_18810 PF13018 Extended Signal Peptide of Type V secretion system CTU_18810 PF16168 Adhesin of bacterial autotransporter system, probable stalk CTU_18820 PF01266 FAD dependent oxidoreductase CTU_18830 PF00171 Aldehyde dehydrogenase family CTU_18840 PF07883 Cupin domain CTU_18840 PF01381 Helix-turn-helix CTU_18850 PF07722 Peptidase C26 CTU_18860 PF00120 Glutamine synthetase, catalytic domain CTU_18870 PF00324 Amino acid permease CTU_18880 PF01590 GAF domain CTU_18880 PF00158 Sigma-54 interaction domain CTU_18890 PF00586 AIR synthase related protein, N-terminal domain CTU_18890 PF02769 AIR synthase related protein, C-terminal domain CTU_18900 PF01924 Hydrogenase formation hypA family CTU_18910 PF01455 HupF/HypC family CTU_18920 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTU_18930 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CTU_18940 PF11046 Transcriptional repressor of hyc and hyp operons CTU_18950 PF13247 4Fe-4S dicluster domain CTU_18960 PF00361 Proton-conducting membrane transporter CTU_18970 PF00146 NADH dehydrogenase CTU_18980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CTU_18980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CTU_18980 PF00374 Nickel-dependent hydrogenase CTU_18990 PF12838 4Fe-4S dicluster domain CTU_19000 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CTU_19010 PF07450 Formate hydrogenlyase maturation protein HycH CTU_19020 PF01750 Hydrogenase maturation protease CTU_19040 PF13247 4Fe-4S dicluster domain CTU_19040 PF12800 4Fe-4S binding domain CTU_19050 PF01568 Molydopterin dinucleotide binding domain CTU_19050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_19050 PF00384 Molybdopterin oxidoreductase CTU_19060 PF00708 Acylphosphatase CTU_19060 PF17788 HypF Kae1-like domain CTU_19060 PF01300 Telomere recombination CTU_19060 PF07503 HypF finger CTU_19070 PF03824 High-affinity nickel-transport protein CTU_19090 PF01568 Molydopterin dinucleotide binding domain CTU_19090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_19090 PF00384 Molybdopterin oxidoreductase CTU_19100 PF01568 Molydopterin dinucleotide binding domain CTU_19100 PF00384 Molybdopterin oxidoreductase CTU_19100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_19110 PF03466 LysR substrate binding domain CTU_19110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_19120 PF07690 Major Facilitator Superfamily CTU_19180 PF00753 Metallo-beta-lactamase superfamily CTU_19190 PF03466 LysR substrate binding domain CTU_19190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_19200 PF00732 GMC oxidoreductase CTU_19200 PF05199 GMC oxidoreductase CTU_19210 PF00171 Aldehyde dehydrogenase family CTU_19220 PF00440 Bacterial regulatory proteins, tetR family CTU_19220 PF13977 BetI-type transcriptional repressor, C-terminal CTU_19230 PF02028 BCCT, betaine/carnitine/choline family transporter CTU_19320 PF00691 OmpA family CTU_19320 PF13488 Glycine zipper CTU_19340 PF00004 ATPase family associated with various cellular activities (AAA) CTU_19340 PF17871 AAA lid domain CTU_19340 PF10431 C-terminal, D2-small domain, of ClpB protein CTU_19340 PF07724 AAA domain (Cdc48 subfamily) CTU_19350 PF04717 Type VI secretion system, phage-baseplate injector CTU_19680 PF01554 MatE CTU_19690 PF00677 Lumazine binding domain CTU_19700 PF00356 Bacterial regulatory proteins, lacI family CTU_19710 PF00232 Glycosyl hydrolase family 1 CTU_19720 PF02378 Phosphotransferase system, EIIC CTU_19740 PF07690 Major Facilitator Superfamily CTU_19750 PF03466 LysR substrate binding domain CTU_19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_19760 PF00356 Bacterial regulatory proteins, lacI family CTU_19770 PF07690 Major Facilitator Superfamily CTU_19780 PF00877 NlpC/P60 family CTU_19800 PF00462 Glutaredoxin CTU_19810 PF00929 Exonuclease CTU_19820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTU_19830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTU_19840 PF00440 Bacterial regulatory proteins, tetR family CTU_19840 PF16925 Tetracyclin repressor-like, C-terminal domain CTU_19850 PF00884 Sulfatase CTU_19850 PF08019 Phosphoethanolamine transferase EptA/EptB CTU_19860 PF06945 Protein of unknown function (DUF1289) CTU_19870 PF00248 Aldo/keto reductase family CTU_19880 PF00080 Copper/zinc superoxide dismutase (SODC) CTU_19890 PF04632 Fusaric acid resistance protein family CTU_19900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_19900 PF00529 HlyD membrane-fusion protein of T1SS CTU_19910 PF07869 Protein of unknown function (DUF1656) CTU_19920 PF01047 MarR family CTU_19930 PF05433 Glycine zipper 2TM domain CTU_19940 PF03702 Anhydro-N-acetylmuramic acid kinase CTU_19950 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CTU_19960 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CTU_19960 PF01243 Pyridoxamine 5'-phosphate oxidase CTU_19970 PF00579 tRNA synthetases class I (W and Y) CTU_19970 PF01479 S4 domain CTU_19980 PF08543 Phosphomethylpyrimidine kinase CTU_19990 PF02798 Glutathione S-transferase, N-terminal domain CTU_19990 PF00043 Glutathione S-transferase, C-terminal domain CTU_20000 PF00854 POT family CTU_20010 PF10576 Iron-sulfur binding domain of endonuclease III CTU_20010 PF00633 Helix-hairpin-helix motif CTU_20010 PF00730 HhH-GPD superfamily base excision DNA repair protein CTU_20020 PF02508 Rnf-Nqr subunit, membrane protein CTU_20030 PF04205 FMN-binding domain CTU_20040 PF03116 NQR2, RnfD, RnfE family CTU_20050 PF13375 RnfC Barrel sandwich hybrid domain CTU_20050 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CTU_20050 PF10531 SLBB domain CTU_20050 PF13237 4Fe-4S dicluster domain CTU_20060 PF04060 Putative Fe-S cluster CTU_20070 PF02508 Rnf-Nqr subunit, membrane protein CTU_20080 PF10754 Protein of unknown function (DUF2569) CTU_20090 PF05321 Haemolysin expression modulating protein CTU_20110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTU_20110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTU_20120 PF13593 SBF-like CPA transporter family (DUF4137) CTU_20130 PF00962 Adenosine/AMP deaminase CTU_20140 PF00155 Aminotransferase class I and II CTU_20150 PF02378 Phosphotransferase system, EIIC CTU_20150 PF00367 phosphotransferase system, EIIB CTU_20170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CTU_20170 PF00356 Bacterial regulatory proteins, lacI family CTU_20180 PF06097 Bacterial protein of unknown function (DUF945) CTU_20190 PF01238 Phosphomannose isomerase type I CTU_20200 PF05683 Fumarase C-terminus CTU_20200 PF05681 Fumarate hydratase (Fumerase) CTU_20210 PF00206 Lyase CTU_20210 PF10415 Fumarase C C-terminus CTU_20220 PF05472 DNA replication terminus site-binding protein (Ter protein) CTU_20230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_20230 PF00512 His Kinase A (phospho-acceptor) domain CTU_20230 PF00672 HAMP domain CTU_20240 PF03466 LysR substrate binding domain CTU_20240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_20260 PF00072 Response regulator receiver domain CTU_20260 PF00486 Transcriptional regulatory protein, C terminal CTU_20280 PF13520 Amino acid permease CTU_20290 PF07338 Protein of unknown function (DUF1471) CTU_20300 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CTU_20300 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CTU_20300 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CTU_20310 PF02233 NAD(P) transhydrogenase beta subunit CTU_20330 PF00582 Universal stress protein family CTU_20340 PF00027 Cyclic nucleotide-binding domain CTU_20340 PF00325 Bacterial regulatory proteins, crp family CTU_20350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CTU_20350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTU_20370 PF01713 Smr domain CTU_20400 PF00296 Luciferase-like monooxygenase CTU_20410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_20410 PF00005 ABC transporter CTU_20430 PF00528 Binding-protein-dependent transport system inner membrane component CTU_20440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_20460 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CTU_20480 PF00893 Small Multidrug Resistance protein CTU_20510 PF02322 Cytochrome bd terminal oxidase subunit II CTU_20520 PF01654 Cytochrome bd terminal oxidase subunit I CTU_20530 PF00155 Aminotransferase class I and II CTU_20530 PF00392 Bacterial regulatory proteins, gntR family CTU_20540 PF13416 Bacterial extracellular solute-binding protein CTU_20550 PF00005 ABC transporter CTU_20550 PF08402 TOBE domain CTU_20560 PF00528 Binding-protein-dependent transport system inner membrane component CTU_20570 PF00528 Binding-protein-dependent transport system inner membrane component CTU_20580 PF00171 Aldehyde dehydrogenase family CTU_20590 PF00589 Phage integrase family CTU_20590 PF12167 Arm DNA-binding domain CTU_20620 PF01757 Acyltransferase family CTU_20680 PF00034 Cytochrome c CTU_20680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CTU_20690 PF01568 Molydopterin dinucleotide binding domain CTU_20690 PF00384 Molybdopterin oxidoreductase CTU_20690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_20700 PF12800 4Fe-4S binding domain CTU_20700 PF13247 4Fe-4S dicluster domain CTU_20710 PF04976 DMSO reductase anchor subunit (DmsC) CTU_20740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_20740 PF00672 HAMP domain CTU_20740 PF02203 Tar ligand binding domain homologue CTU_20770 PF01095 Pectinesterase CTU_20820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_20830 PF10735 Protein of unknown function (DUF2526) CTU_20840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CTU_20840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CTU_20850 PF04657 Putative inner membrane exporter, YdcZ CTU_20860 PF00583 Acetyltransferase (GNAT) family CTU_20870 PF08671 Anti-repressor SinI CTU_20870 PF01381 Helix-turn-helix CTU_20880 PF00107 Zinc-binding dehydrogenase CTU_20880 PF16884 N-terminal domain of oxidoreductase CTU_20890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_20890 PF00005 ABC transporter CTU_20900 PF02423 Ornithine cyclodeaminase/mu-crystallin family CTU_20920 PF00528 Binding-protein-dependent transport system inner membrane component CTU_20930 PF00528 Binding-protein-dependent transport system inner membrane component CTU_20930 PF12911 N-terminal TM domain of oligopeptide transport permease C CTU_20940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_20950 PF07729 FCD domain CTU_20950 PF00392 Bacterial regulatory proteins, gntR family CTU_20980 PF02203 Tar ligand binding domain homologue CTU_20980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_20980 PF00672 HAMP domain CTU_21000 PF00128 Alpha amylase, catalytic domain CTU_21000 PF16657 Maltogenic Amylase, C-terminal domain CTU_21020 PF01381 Helix-turn-helix CTU_21030 PF00593 TonB dependent receptor CTU_21030 PF07715 TonB-dependent Receptor Plug Domain CTU_21050 PF00528 Binding-protein-dependent transport system inner membrane component CTU_21060 PF00005 ABC transporter CTU_21100 PF00324 Amino acid permease CTU_21110 PF00144 Beta-lactamase CTU_21120 PF00881 Nitroreductase family CTU_21130 PF01361 Tautomerase enzyme CTU_21140 PF05067 Manganese containing catalase CTU_21150 PF05974 Domain of unknown function (DUF892) CTU_21170 PF00797 N-acetyltransferase CTU_21180 PF12852 Cupin CTU_21180 PF12833 Helix-turn-helix domain CTU_21200 PF00107 Zinc-binding dehydrogenase CTU_21200 PF08240 Alcohol dehydrogenase GroES-like domain CTU_21230 PF01613 Flavin reductase like domain CTU_21260 PF00561 alpha/beta hydrolase fold CTU_21270 PF00106 short chain dehydrogenase CTU_21280 PF06719 AraC-type transcriptional regulator N-terminus CTU_21280 PF12833 Helix-turn-helix domain CTU_21290 PF03851 UV-endonuclease UvdE CTU_21320 PF00563 EAL domain CTU_21320 PF08668 HDOD domain CTU_21340 PF07995 Glucose / Sorbosone dehydrogenase CTU_21360 PF00877 NlpC/P60 family CTU_21380 PF03466 LysR substrate binding domain CTU_21380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_21400 PF13673 Acetyltransferase (GNAT) domain CTU_21400 PF04229 GrpB protein CTU_21450 PF00072 Response regulator receiver domain CTU_21540 PF00072 Response regulator receiver domain CTU_21540 PF01627 Hpt domain CTU_21540 PF00512 His Kinase A (phospho-acceptor) domain CTU_21540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_21540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CTU_21540 PF00672 HAMP domain CTU_21560 PF01204 Trehalase CTU_21570 PF03797 Autotransporter beta-domain CTU_21570 PF00657 GDSL-like Lipase/Acylhydrolase CTU_21580 PF08125 Mannitol dehydrogenase C-terminal domain CTU_21580 PF01232 Mannitol dehydrogenase Rossmann domain CTU_21600 PF13426 PAS domain CTU_21600 PF08448 PAS fold CTU_21600 PF08447 PAS fold CTU_21600 PF05231 MASE1 CTU_21600 PF00990 Diguanylate cyclase, GGDEF domain CTU_21600 PF00563 EAL domain CTU_21610 PF00563 EAL domain CTU_21610 PF03707 Bacterial signalling protein N terminal repeat CTU_21610 PF00990 Diguanylate cyclase, GGDEF domain CTU_21620 PF00990 Diguanylate cyclase, GGDEF domain CTU_21630 PF13811 Domain of unknown function (DUF4186) CTU_21640 PF04960 Glutaminase CTU_21650 PF12729 Four helix bundle sensory module for signal transduction CTU_21650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_21650 PF00672 HAMP domain CTU_21660 PF00171 Aldehyde dehydrogenase family CTU_21670 PF03466 LysR substrate binding domain CTU_21670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_21680 PF00583 Acetyltransferase (GNAT) family CTU_21690 PF00056 lactate/malate dehydrogenase, NAD binding domain CTU_21690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CTU_21700 PF02567 Phenazine biosynthesis-like protein CTU_21720 PF07690 Major Facilitator Superfamily CTU_21730 PF01047 MarR family CTU_21740 PF12833 Helix-turn-helix domain CTU_21750 PF13999 MarB protein CTU_21760 PF00892 EamA-like transporter family CTU_21770 PF07690 Major Facilitator Superfamily CTU_21800 PF00005 ABC transporter CTU_21810 PF00005 ABC transporter CTU_21820 PF02653 Branched-chain amino acid transport system / permease component CTU_21830 PF02653 Branched-chain amino acid transport system / permease component CTU_21840 PF13458 Periplasmic binding protein CTU_21850 PF07729 FCD domain CTU_21850 PF00392 Bacterial regulatory proteins, gntR family CTU_21860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTU_21860 PF00364 Biotin-requiring enzyme CTU_21860 PF00289 Biotin carboxylase, N-terminal domain CTU_21860 PF02785 Biotin carboxylase C-terminal domain CTU_21860 PF00364 Biotin-requiring enzyme CTU_21860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTU_21860 PF00289 Biotin carboxylase, N-terminal domain CTU_21860 PF02785 Biotin carboxylase C-terminal domain CTU_21870 PF01425 Amidase CTU_21880 PF01717 Cobalamin-independent synthase, Catalytic domain CTU_21900 PF10685 Stress-induced bacterial acidophilic repeat motif CTU_21920 PF01062 Bestrophin, RFP-TM, chloride channel CTU_21940 PF01432 Peptidase family M3 CTU_21950 PF00106 short chain dehydrogenase CTU_21960 PF07729 FCD domain CTU_21960 PF00392 Bacterial regulatory proteins, gntR family CTU_21980 PF14001 YdfZ protein CTU_21990 PF01232 Mannitol dehydrogenase Rossmann domain CTU_21990 PF08125 Mannitol dehydrogenase C-terminal domain CTU_22000 PF07690 Major Facilitator Superfamily CTU_22000 PF00083 Sugar (and other) transporter CTU_22010 PF08240 Alcohol dehydrogenase GroES-like domain CTU_22010 PF00107 Zinc-binding dehydrogenase CTU_22020 PF07690 Major Facilitator Superfamily CTU_22030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CTU_22030 PF13378 Enolase C-terminal domain-like CTU_22040 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CTU_22050 PF06932 Protein of unknown function (DUF1283) CTU_22060 PF13302 Acetyltransferase (GNAT) domain CTU_22070 PF06788 Uncharacterised protein family (UPF0257) CTU_22080 PF06649 Protein of unknown function (DUF1161) CTU_22090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_22090 PF01568 Molydopterin dinucleotide binding domain CTU_22090 PF00384 Molybdopterin oxidoreductase CTU_22100 PF00384 Molybdopterin oxidoreductase CTU_22100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_22100 PF01568 Molydopterin dinucleotide binding domain CTU_22110 PF12800 4Fe-4S binding domain CTU_22110 PF13247 4Fe-4S dicluster domain CTU_22120 PF04976 DMSO reductase anchor subunit (DmsC) CTU_22130 PF02613 Nitrate reductase delta subunit CTU_22140 PF06942 GlpM protein CTU_22150 PF00528 Binding-protein-dependent transport system inner membrane component CTU_22160 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTU_22170 PF00528 Binding-protein-dependent transport system inner membrane component CTU_22180 PF00005 ABC transporter CTU_22180 PF00571 CBS domain CTU_22200 PF00480 ROK family CTU_22210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_22210 PF03466 LysR substrate binding domain CTU_22220 PF07690 Major Facilitator Superfamily CTU_22230 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CTU_22240 PF00089 Trypsin CTU_22250 PF00893 Small Multidrug Resistance protein CTU_22260 PF00893 Small Multidrug Resistance protein CTU_22280 PF13438 Domain of unknown function (DUF4113) CTU_22280 PF00817 impB/mucB/samB family CTU_22280 PF11799 impB/mucB/samB family C-terminal domain CTU_22290 PF00717 Peptidase S24-like CTU_22300 PF12392 Collagenase CTU_22300 PF01136 Peptidase family U32 CTU_22310 PF01381 Helix-turn-helix CTU_22310 PF07883 Cupin domain CTU_22320 PF03594 Benzoate membrane transport protein CTU_22330 PF11769 Protein of unknown function (DUF3313) CTU_22340 PF03848 Tellurite resistance protein TehB CTU_22360 PF18836 Beta solenoid repeat from YDCK CTU_22370 PF13302 Acetyltransferase (GNAT) domain CTU_22380 PF04349 Periplasmic glucan biosynthesis protein, MdoG CTU_22390 PF00135 Carboxylesterase family CTU_22400 PF07063 Domain of unknown function (DUF1338) CTU_22410 PF03466 LysR substrate binding domain CTU_22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_22420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTU_22430 PF05974 Domain of unknown function (DUF892) CTU_22440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_22440 PF00672 HAMP domain CTU_22440 PF02203 Tar ligand binding domain homologue CTU_22450 PF08240 Alcohol dehydrogenase GroES-like domain CTU_22450 PF00107 Zinc-binding dehydrogenase CTU_22460 PF02583 Metal-sensitive transcriptional repressor CTU_22520 PF08946 Osmosensory transporter coiled coil CTU_22520 PF00083 Sugar (and other) transporter CTU_22530 PF01292 Prokaryotic cytochrome b561 CTU_22540 PF07859 alpha/beta hydrolase fold CTU_22540 PF13472 GDSL-like Lipase/Acylhydrolase family CTU_22550 PF00171 Aldehyde dehydrogenase family CTU_22560 PF02698 DUF218 domain CTU_22570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTU_22610 PF13533 Biotin-lipoyl like CTU_22620 PF02321 Outer membrane efflux protein CTU_22630 PF01596 O-methyltransferase CTU_22640 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CTU_22640 PF00271 Helicase conserved C-terminal domain CTU_22640 PF04408 Helicase associated domain (HA2) CTU_22640 PF11898 Domain of unknown function (DUF3418) CTU_22640 PF00270 DEAD/DEAH box helicase CTU_22650 PF02525 Flavodoxin-like fold CTU_22670 PF07027 Protein of unknown function (DUF1318) CTU_22680 PF13617 YnbE-like lipoprotein CTU_22690 PF11739 Dicarboxylate transport CTU_22700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTU_22700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTU_22710 PF03724 META domain CTU_22720 PF03891 Domain of unknown function (DUF333) CTU_22730 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CTU_22730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_22730 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CTU_22730 PF10371 Domain of unknown function CTU_22730 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CTU_22760 PF00107 Zinc-binding dehydrogenase CTU_22760 PF08240 Alcohol dehydrogenase GroES-like domain CTU_22770 PF00171 Aldehyde dehydrogenase family CTU_22780 PF01590 GAF domain CTU_22780 PF02954 Bacterial regulatory protein, Fis family CTU_22780 PF00158 Sigma-54 interaction domain CTU_22840 PF01171 PP-loop family CTU_22860 PF01544 CorA-like Mg2+ transporter protein CTU_22880 PF10753 Toxin GhoT_OrtT CTU_22920 PF00990 Diguanylate cyclase, GGDEF domain CTU_22920 PF00563 EAL domain CTU_22920 PF13188 PAS domain CTU_22920 PF03707 Bacterial signalling protein N terminal repeat CTU_22940 PF10685 Stress-induced bacterial acidophilic repeat motif CTU_22990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_23000 PF00246 Zinc carboxypeptidase CTU_23010 PF13378 Enolase C-terminal domain-like CTU_23010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CTU_23020 PF08534 Redoxin CTU_23030 PF00158 Sigma-54 interaction domain CTU_23030 PF18024 Helix-turn-helix domain CTU_23040 PF05128 Domain of unknown function (DUF697) CTU_23050 PF04317 YcjX-like family, DUF463 CTU_23060 PF00356 Bacterial regulatory proteins, lacI family CTU_23060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CTU_23070 PF00005 ABC transporter CTU_23070 PF03459 TOBE domain CTU_23070 PF17912 MalK OB fold domain CTU_23080 PF13419 Haloacid dehalogenase-like hydrolase CTU_23090 PF03633 Glycosyl hydrolase family 65, C-terminal domain CTU_23090 PF03632 Glycosyl hydrolase family 65 central catalytic domain CTU_23090 PF03636 Glycosyl hydrolase family 65, N-terminal domain CTU_23100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTU_23100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTU_23110 PF01261 Xylose isomerase-like TIM barrel CTU_23120 PF00107 Zinc-binding dehydrogenase CTU_23130 PF00528 Binding-protein-dependent transport system inner membrane component CTU_23140 PF00528 Binding-protein-dependent transport system inner membrane component CTU_23150 PF01547 Bacterial extracellular solute-binding protein CTU_23160 PF00128 Alpha amylase, catalytic domain CTU_23170 PF09584 Phage shock protein PspD (Phageshock_PspD) CTU_23180 PF04024 PspC domain CTU_23190 PF06667 Phage shock protein B CTU_23200 PF04012 PspA/IM30 family CTU_23210 PF00158 Sigma-54 interaction domain CTU_23210 PF02954 Bacterial regulatory protein, Fis family CTU_23220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_23230 PF00528 Binding-protein-dependent transport system inner membrane component CTU_23240 PF12911 N-terminal TM domain of oligopeptide transport permease C CTU_23240 PF00528 Binding-protein-dependent transport system inner membrane component CTU_23250 PF00005 ABC transporter CTU_23250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_23260 PF00005 ABC transporter CTU_23290 PF17876 Cold shock domain CTU_23290 PF08206 Ribonuclease B OB domain CTU_23290 PF00575 S1 RNA binding domain CTU_23290 PF00773 RNB domain CTU_23300 PF13426 PAS domain CTU_23300 PF00563 EAL domain CTU_23300 PF00990 Diguanylate cyclase, GGDEF domain CTU_23310 PF00378 Enoyl-CoA hydratase/isomerase CTU_23330 PF00923 Transaldolase/Fructose-6-phosphate aldolase CTU_23340 PF04055 Radical SAM superfamily CTU_23360 PF00455 DeoR C terminal sensor domain CTU_23360 PF08220 DeoR-like helix-turn-helix domain CTU_23380 PF05433 Glycine zipper 2TM domain CTU_23390 PF01253 Translation initiation factor SUI1 CTU_23400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CTU_23410 PF18073 Rubredoxin metal binding domain CTU_23420 PF06305 Lipopolysaccharide assembly protein A domain CTU_23430 PF01569 PAP2 superfamily CTU_23440 PF00925 GTP cyclohydrolase II CTU_23450 PF00330 Aconitase family (aconitate hydratase) CTU_23450 PF00694 Aconitase C-terminal domain CTU_23470 PF03466 LysR substrate binding domain CTU_23470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_23480 PF01751 Toprim domain CTU_23480 PF01131 DNA topoisomerase CTU_23480 PF08272 Topoisomerase I zinc-ribbon-like CTU_23480 PF01396 Topoisomerase DNA binding C4 zinc finger CTU_23490 PF10692 Protein of unknown function (DUF2498) CTU_23500 PF08496 Peptidase family S49 N-terminal CTU_23500 PF01343 Peptidase family S49 CTU_23510 PF00106 short chain dehydrogenase CTU_23520 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CTU_23520 PF12557 Cob(I)alamin adenosyltransferase N terminal CTU_23530 PF01479 S4 domain CTU_23530 PF00849 RNA pseudouridylate synthase CTU_23540 PF01300 Telomere recombination CTU_23550 PF02811 PHP domain CTU_23560 PF04715 Anthranilate synthase component I, N terminal region CTU_23560 PF00425 chorismate binding enzyme CTU_23570 PF02885 Glycosyl transferase family, helical bundle domain CTU_23570 PF00117 Glutamine amidotransferase class-I CTU_23570 PF00591 Glycosyl transferase family, a/b domain CTU_23580 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CTU_23580 PF00218 Indole-3-glycerol phosphate synthase CTU_23590 PF00291 Pyridoxal-phosphate dependent enzyme CTU_23600 PF00290 Tryptophan synthase alpha chain CTU_23630 PF03922 OmpW family CTU_23640 PF03692 Putative zinc- or iron-chelating domain CTU_23660 PF04279 Intracellular septation protein A CTU_23670 PF07715 TonB-dependent Receptor Plug Domain CTU_23670 PF00593 TonB dependent receptor CTU_23680 PF03061 Thioesterase superfamily CTU_23690 PF03544 Gram-negative bacterial TonB protein C-terminal CTU_23700 PF03795 YCII-related domain CTU_23740 PF13396 Phospholipase_D-nuclease N-terminal CTU_23740 PF13091 PLD-like domain CTU_23750 PF04269 Protein of unknown function, DUF440 CTU_23760 PF00520 Ion transport protein CTU_23760 PF00027 Cyclic nucleotide-binding domain CTU_23770 PF00005 ABC transporter CTU_23770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_23780 PF00005 ABC transporter CTU_23780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_23790 PF00528 Binding-protein-dependent transport system inner membrane component CTU_23790 PF12911 N-terminal TM domain of oligopeptide transport permease C CTU_23800 PF00528 Binding-protein-dependent transport system inner membrane component CTU_23810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_23830 PF01914 MarC family integral membrane protein CTU_23840 PF00465 Iron-containing alcohol dehydrogenase CTU_23840 PF00171 Aldehyde dehydrogenase family CTU_23850 PF00265 Thymidine kinase CTU_23860 PF00816 H-NS histone family CTU_23870 PF01370 NAD dependent epimerase/dehydratase family CTU_23880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CTU_23880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CTU_23880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CTU_23890 PF00483 Nucleotidyl transferase CTU_23900 PF00072 Response regulator receiver domain CTU_23910 PF02810 SEC-C motif CTU_23920 PF01842 ACT domain CTU_23920 PF00551 Formyl transferase CTU_23930 PF07690 Major Facilitator Superfamily CTU_23950 PF00106 short chain dehydrogenase CTU_23970 PF08546 Ketopantoate reductase PanE/ApbA C terminal CTU_23970 PF02558 Ketopantoate reductase PanE/ApbA CTU_23980 PF02665 Nitrate reductase gamma subunit CTU_23990 PF02613 Nitrate reductase delta subunit CTU_24000 PF13247 4Fe-4S dicluster domain CTU_24000 PF14711 Respiratory nitrate reductase beta C-terminal CTU_24010 PF14710 Respiratory nitrate reductase alpha N-terminal CTU_24010 PF01568 Molydopterin dinucleotide binding domain CTU_24010 PF00384 Molybdopterin oxidoreductase CTU_24020 PF07690 Major Facilitator Superfamily CTU_24040 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CTU_24040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_24040 PF00672 HAMP domain CTU_24040 PF07730 Histidine kinase CTU_24050 PF00072 Response regulator receiver domain CTU_24050 PF00196 Bacterial regulatory proteins, luxR family CTU_24060 PF11924 Inverse autotransporter, beta-domain CTU_24070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_24070 PF00384 Molybdopterin oxidoreductase CTU_24070 PF01568 Molydopterin dinucleotide binding domain CTU_24070 PF04324 BFD-like [2Fe-2S] binding domain CTU_24080 PF04324 BFD-like [2Fe-2S] binding domain CTU_24080 PF13806 Rieske-like [2Fe-2S] domain CTU_24080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTU_24080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_24080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTU_24080 PF18267 Rubredoxin NAD+ reductase C-terminal domain CTU_24090 PF00005 ABC transporter CTU_24100 PF00528 Binding-protein-dependent transport system inner membrane component CTU_24120 PF03861 ANTAR domain CTU_24120 PF08376 Nitrate and nitrite sensing CTU_24130 PF02635 DsrE/DsrF-like family CTU_24140 PF00672 HAMP domain CTU_24140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_24140 PF02203 Tar ligand binding domain homologue CTU_24160 PF04752 ChaC-like protein CTU_24170 PF06150 ChaB CTU_24180 PF01699 Sodium/calcium exchanger protein CTU_24190 PF00793 DAHP synthetase I family CTU_24200 PF13369 Transglutaminase-like superfamily CTU_24210 PF04247 Invasion gene expression up-regulator, SirB CTU_24220 PF17827 PrmC N-terminal domain CTU_24220 PF13847 Methyltransferase domain CTU_24230 PF00472 RF-1 domain CTU_24230 PF03462 PCRF domain CTU_24240 PF01488 Shikimate / quinate 5-dehydrogenase CTU_24240 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CTU_24240 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CTU_24250 PF03550 Outer membrane lipoprotein LolB CTU_24260 PF08544 GHMP kinases C terminal CTU_24260 PF00288 GHMP kinases N terminal domain CTU_24270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CTU_24270 PF14572 Phosphoribosyl synthetase-associated domain CTU_24280 PF00916 Sulfate permease family CTU_24280 PF01740 STAS domain CTU_24300 PF10762 Protein of unknown function (DUF2583) CTU_24310 PF01195 Peptidyl-tRNA hydrolase CTU_24320 PF06071 Protein of unknown function (DUF933) CTU_24320 PF01926 50S ribosome-binding GTPase CTU_24330 PF02810 SEC-C motif CTU_24330 PF03695 Uncharacterised protein family (UPF0149) CTU_24360 PF02525 Flavodoxin-like fold CTU_24380 PF02627 Carboxymuconolactone decarboxylase family CTU_24390 PF00155 Aminotransferase class I and II CTU_24390 PF00392 Bacterial regulatory proteins, gntR family CTU_24430 PF08402 TOBE domain CTU_24430 PF00005 ABC transporter CTU_24450 PF00356 Bacterial regulatory proteins, lacI family CTU_24460 PF01204 Trehalase CTU_24470 PF07715 TonB-dependent Receptor Plug Domain CTU_24470 PF00593 TonB dependent receptor CTU_24480 PF04226 Transglycosylase associated protein CTU_24500 PF07238 PilZ domain CTU_24500 PF07317 Flagellar regulator YcgR CTU_24510 PF01464 Transglycosylase SLT domain CTU_24520 PF02016 LD-carboxypeptidase N-terminal domain CTU_24520 PF17676 LD-carboxypeptidase C-terminal domain CTU_24540 PF00583 Acetyltransferase (GNAT) family CTU_24550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_24550 PF02203 Tar ligand binding domain homologue CTU_24550 PF00672 HAMP domain CTU_24570 PF00248 Aldo/keto reductase family CTU_24580 PF03466 LysR substrate binding domain CTU_24580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_24590 PF00999 Sodium/hydrogen exchanger family CTU_24590 PF03471 Transporter associated domain CTU_24590 PF02080 TrkA-C domain CTU_24600 PF01168 Alanine racemase, N-terminal domain CTU_24600 PF00842 Alanine racemase, C-terminal domain CTU_24610 PF01266 FAD dependent oxidoreductase CTU_24620 PF04293 SpoVR like protein CTU_24630 PF00392 Bacterial regulatory proteins, gntR family CTU_24630 PF07840 FadR C-terminal domain CTU_24650 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CTU_24660 PF02600 Disulfide bond formation protein DsbB CTU_24680 PF00535 Glycosyl transferase family 2 CTU_24700 PF01757 Acyltransferase family CTU_24710 PF13276 HTH-like domain CTU_24710 PF13683 Integrase core domain CTU_24720 PF13683 Integrase core domain CTU_24720 PF13276 HTH-like domain CTU_24730 PF01527 Transposase CTU_24740 PF03692 Putative zinc- or iron-chelating domain CTU_24750 PF01557 Fumarylacetoacetate (FAA) hydrolase family CTU_24760 PF05166 YcgL domain CTU_24770 PF05209 Septum formation inhibitor MinC, N-terminal domain CTU_24770 PF03775 Septum formation inhibitor MinC, C-terminal domain CTU_24780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CTU_24790 PF03776 Septum formation topological specificity factor MinE CTU_24800 PF01612 3'-5' exonuclease CTU_24800 PF00570 HRDC domain CTU_24810 PF00501 AMP-binding enzyme CTU_24810 PF13193 AMP-binding enzyme C-terminal domain CTU_24820 PF03843 Outer membrane lipoprotein Slp family CTU_24830 PF00814 Glycoprotease family CTU_24840 PF04851 Type III restriction enzyme, res subunit CTU_24840 PF13307 Helicase C-terminal domain CTU_24850 PF01042 Endoribonuclease L-PSP CTU_24860 PF00487 Fatty acid desaturase CTU_24880 PF04116 Fatty acid hydroxylase superfamily CTU_24920 PF01370 NAD dependent epimerase/dehydratase family CTU_24930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CTU_24930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CTU_24940 PF03701 Uncharacterised protein family (UPF0181) CTU_24950 PF04715 Anthranilate synthase component I, N terminal region CTU_24950 PF00425 chorismate binding enzyme CTU_24960 PF00293 NUDIX domain CTU_24970 PF03313 Serine dehydratase alpha chain CTU_24970 PF03315 Serine dehydratase beta chain CTU_24980 PF00563 EAL domain CTU_24980 PF12792 CSS motif domain associated with EAL CTU_24990 PF03741 Integral membrane protein TerC family CTU_24990 PF03471 Transporter associated domain CTU_25000 PF03610 PTS system fructose IIA component CTU_25000 PF03830 PTS system sorbose subfamily IIB component CTU_25010 PF03609 PTS system sorbose-specific iic component CTU_25020 PF03613 PTS system mannose/fructose/sorbose family IID component CTU_25030 PF06173 Protein of unknown function (DUF986) CTU_25040 PF02659 Putative manganese efflux pump CTU_25050 PF13847 Methyltransferase domain CTU_25060 PF00313 'Cold-shock' DNA-binding domain CTU_25070 PF12706 Beta-lactamase superfamily domain CTU_25080 PF13974 YebO-like protein CTU_25090 PF13998 MgrB protein CTU_25100 PF13996 YobH-like protein CTU_25110 PF09339 IclR helix-turn-helix domain CTU_25110 PF01614 Bacterial transcriptional regulator CTU_25120 PF01435 Peptidase family M48 CTU_25130 PF17804 Tail specific protease N-terminal domain CTU_25130 PF03572 Peptidase family S41 CTU_25130 PF00595 PDZ domain CTU_25130 PF11818 C-terminal domain of tail specific protease (DUF3340) CTU_25140 PF04352 ProQ/FINO family CTU_25140 PF17516 ProQ C-terminal domain CTU_25150 PF13185 GAF domain CTU_25160 PF04403 Paraquat-inducible protein A CTU_25170 PF02470 MlaD protein CTU_25180 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CTU_25180 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CTU_25180 PF01189 16S rRNA methyltransferase RsmB/F CTU_25190 PF07351 Protein of unknown function (DUF1480) CTU_25200 PF07358 Protein of unknown function (DUF1482) CTU_25210 PF00149 Calcineurin-like phosphoesterase CTU_25220 PF10709 Protein of unknown function (DUF2511) CTU_25230 PF05425 Copper resistance protein D CTU_25240 PF04234 CopC domain CTU_25250 PF06440 DNA polymerase III, theta subunit CTU_25260 PF00929 Exonuclease CTU_25270 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CTU_25270 PF00326 Prolyl oligopeptidase family CTU_25280 PF04391 Protein of unknown function (DUF533) CTU_25290 PF13995 YebF-like protein CTU_25300 PF07130 YebG protein CTU_25310 PF02222 ATP-grasp domain CTU_25320 PF01081 KDPG and KHG aldolase CTU_25330 PF00920 Dehydratase family CTU_25340 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CTU_25340 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CTU_25360 PF01380 SIS domain CTU_25360 PF01418 Helix-turn-helix domain, rpiR family CTU_25370 PF02887 Pyruvate kinase, alpha/beta domain CTU_25370 PF00224 Pyruvate kinase, barrel domain CTU_25380 PF03279 Bacterial lipid A biosynthesis acyltransferase CTU_25390 PF01476 LysM domain CTU_25390 PF08525 Opacity-associated protein A N-terminal motif CTU_25390 PF01551 Peptidase family M23 CTU_25400 PF01297 Zinc-uptake complex component A periplasmic CTU_25410 PF00005 ABC transporter CTU_25420 PF00950 ABC 3 transport family CTU_25430 PF05496 Holliday junction DNA helicase RuvB P-loop domain CTU_25430 PF05491 RuvB C-terminal winged helix domain CTU_25430 PF17864 RuvB AAA lid domain CTU_25440 PF01330 RuvA N terminal domain CTU_25440 PF07499 RuvA, C-terminal domain CTU_25450 PF02075 Crossover junction endodeoxyribonuclease RuvC CTU_25460 PF01709 Transcriptional regulator CTU_25470 PF00293 NUDIX domain CTU_25480 PF01336 OB-fold nucleic acid binding domain CTU_25480 PF02938 GAD domain CTU_25480 PF00152 tRNA synthetases class II (D, K and N) CTU_25500 PF00857 Isochorismatase family CTU_25510 PF01904 Protein of unknown function DUF72 CTU_25520 PF01124 MAPEG family CTU_25530 PF13649 Methyltransferase domain CTU_25540 PF08003 Protein of unknown function (DUF1698) CTU_25550 PF04972 BON domain CTU_25550 PF01476 LysM domain CTU_25580 PF00012 Hsp70 protein CTU_25590 PF03932 CutC family CTU_25600 PF00155 Aminotransferase class I and II CTU_25610 PF00107 Zinc-binding dehydrogenase CTU_25610 PF13823 Alcohol dehydrogenase GroES-associated CTU_25610 PF08240 Alcohol dehydrogenase GroES-like domain CTU_25630 PF06185 YecM protein CTU_25650 PF03485 Arginyl tRNA synthetase N terminal domain CTU_25650 PF00750 tRNA synthetases class I (R) CTU_25650 PF05746 DALR anticodon binding domain CTU_25660 PF15977 Winged helix-turn-helix DNA binding CTU_25680 PF07470 Glycosyl Hydrolase Family 88 CTU_25700 PF06366 Flagellar protein FlhE CTU_25710 PF00771 FHIPEP family CTU_25720 PF01312 FlhB HrpN YscU SpaS Family CTU_25730 PF04344 Chemotaxis phosphatase, CheZ CTU_25740 PF00072 Response regulator receiver domain CTU_25750 PF01339 CheB methylesterase CTU_25750 PF00072 Response regulator receiver domain CTU_25760 PF01739 CheR methyltransferase, SAM binding domain CTU_25760 PF03705 CheR methyltransferase, all-alpha domain CTU_25780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_25780 PF02203 Tar ligand binding domain homologue CTU_25780 PF00672 HAMP domain CTU_25840 PF01584 CheW-like domain CTU_25850 PF02895 Signal transducing histidine kinase, homodimeric domain CTU_25850 PF09078 CheY binding CTU_25850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_25850 PF01627 Hpt domain CTU_25850 PF01584 CheW-like domain CTU_25860 PF00691 OmpA family CTU_25860 PF13677 Membrane MotB of proton-channel complex MotA/MotB CTU_25870 PF01618 MotA/TolQ/ExbB proton channel family CTU_25880 PF05280 Flagellar transcriptional activator (FlhC) CTU_25890 PF05247 Flagellar transcriptional activator (FlhD) CTU_25900 PF00582 Universal stress protein family CTU_25910 PF00982 Glycosyltransferase family 20 CTU_25920 PF02358 Trehalose-phosphatase CTU_25930 PF02653 Branched-chain amino acid transport system / permease component CTU_25940 PF00005 ABC transporter CTU_25950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CTU_25980 PF00210 Ferritin-like domain CTU_25990 PF03605 Anaerobic c4-dicarboxylate membrane transporter CTU_26020 PF10964 Protein of unknown function (DUF2766) CTU_26030 PF07690 Major Facilitator Superfamily CTU_26050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_26050 PF02203 Tar ligand binding domain homologue CTU_26050 PF00672 HAMP domain CTU_26070 PF00210 Ferritin-like domain CTU_26090 PF03222 Tryptophan/tyrosine permease family CTU_26100 PF00583 Acetyltransferase (GNAT) family CTU_26120 PF00313 'Cold-shock' DNA-binding domain CTU_26140 PF01066 CDP-alcohol phosphatidyltransferase CTU_26150 PF01541 GIY-YIG catalytic domain CTU_26150 PF08459 UvrC Helix-hairpin-helix N-terminal CTU_26150 PF02151 UvrB/uvrC motif CTU_26160 PF00196 Bacterial regulatory proteins, luxR family CTU_26160 PF00072 Response regulator receiver domain CTU_26180 PF10769 Protein of unknown function (DUF2594) CTU_26190 PF03472 Autoinducer binding domain CTU_26190 PF00196 Bacterial regulatory proteins, luxR family CTU_26220 PF00291 Pyridoxal-phosphate dependent enzyme CTU_26240 PF02899 Phage integrase, N-terminal SAM-like domain CTU_26250 PF04542 Sigma-70 region 2 CTU_26250 PF04539 Sigma-70 region 3 CTU_26250 PF04545 Sigma-70, region 4 CTU_26280 PF00501 AMP-binding enzyme CTU_26280 PF13193 AMP-binding enzyme C-terminal domain CTU_26290 PF02779 Transketolase, pyrimidine binding domain CTU_26290 PF02780 Transketolase, C-terminal domain CTU_26300 PF00456 Transketolase, thiamine diphosphate binding domain CTU_26350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTU_26380 PF08884 Flagellin D3 domain CTU_26380 PF08884 Flagellin D3 domain CTU_26380 PF00669 Bacterial flagellin N-terminal helical region CTU_26380 PF00669 Bacterial flagellin N-terminal helical region CTU_26380 PF00700 Bacterial flagellin C-terminal helical region CTU_26380 PF00700 Bacterial flagellin C-terminal helical region CTU_26400 PF02465 Flagellar hook-associated protein 2 N-terminus CTU_26400 PF07195 Flagellar hook-associated protein 2 C-terminus CTU_26410 PF02561 Flagellar protein FliS CTU_26420 PF05400 Flagellar protein FliT CTU_26430 PF13987 YedD-like protein CTU_26440 PF04143 Sulphur transport CTU_26450 PF01206 Sulfurtransferase TusA CTU_26460 PF02586 SOS response associated peptidase (SRAP) CTU_26510 PF00873 AcrB/AcrD/AcrF family CTU_26540 PF02049 Flagellar hook-basal body complex protein FliE CTU_26550 PF01514 Secretory protein of YscJ/FliF family CTU_26550 PF08345 Flagellar M-ring protein C-terminal CTU_26560 PF14842 FliG N-terminal domain CTU_26560 PF14841 FliG middle domain CTU_26560 PF01706 FliG C-terminal domain CTU_26570 PF02108 Flagellar assembly protein FliH CTU_26580 PF18269 T3SS EscN ATPase C-terminal domain CTU_26580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTU_26590 PF02050 Flagellar FliJ protein CTU_26600 PF02120 Flagellar hook-length control protein FliK CTU_26610 PF03748 Flagellar basal body-associated protein FliL CTU_26620 PF02154 Flagellar motor switch protein FliM CTU_26620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CTU_26630 PF16973 Flagellar motor switch protein FliN N-terminal CTU_26630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CTU_26640 PF04347 Flagellar biosynthesis protein, FliO CTU_26650 PF00813 FliP family CTU_26660 PF01313 Bacterial export proteins, family 3 CTU_26670 PF01311 Bacterial export proteins, family 1 CTU_26680 PF00196 Bacterial regulatory proteins, luxR family CTU_26690 PF10781 Dextransucrase DSRB CTU_26700 PF10733 Protein of unknown function (DUF2525) CTU_26720 PF17151 Periplasmic sensor domain CTU_26720 PF00990 Diguanylate cyclase, GGDEF domain CTU_26730 PF09926 Uncharacterized small protein (DUF2158) CTU_26740 PF05661 Protein of unknown function (DUF808) CTU_26750 PF00892 EamA-like transporter family CTU_26760 PF03852 DNA mismatch endonuclease Vsr CTU_26770 PF18284 DNA methylase N-terminal domain CTU_26770 PF00145 C-5 cytosine-specific DNA methylase CTU_26780 PF01966 HD domain CTU_26800 PF00267 Gram-negative porin CTU_26810 PF06183 DinI-like family CTU_26820 PF00106 short chain dehydrogenase CTU_26840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_26840 PF03466 LysR substrate binding domain CTU_26850 PF00360 Phytochrome region CTU_26850 PF00563 EAL domain CTU_26850 PF01590 GAF domain CTU_26850 PF00990 Diguanylate cyclase, GGDEF domain CTU_26870 PF06167 Glucose-regulated metallo-peptidase M90 CTU_26880 PF07690 Major Facilitator Superfamily CTU_26880 PF00083 Sugar (and other) transporter CTU_26890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_26890 PF03466 LysR substrate binding domain CTU_26900 PF03466 LysR substrate binding domain CTU_26900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_26910 PF00296 Luciferase-like monooxygenase CTU_26930 PF04940 Sensors of blue-light using FAD CTU_26930 PF00563 EAL domain CTU_26940 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CTU_26940 PF01048 Phosphorylase superfamily CTU_27000 PF01554 MatE CTU_27050 PF04363 Protein of unknown function (DUF496) CTU_27060 PF04632 Fusaric acid resistance protein family CTU_27070 PF06445 GyrI-like small molecule binding domain CTU_27080 PF07943 Penicillin-binding protein 5, C-terminal domain CTU_27080 PF00768 D-alanyl-D-alanine carboxypeptidase CTU_27100 PF00929 Exonuclease CTU_27100 PF08411 Exonuclease C-terminal CTU_27110 PF13520 Amino acid permease CTU_27120 PF00202 Aminotransferase class-III CTU_27130 PF07722 Peptidase C26 CTU_27140 PF01370 NAD dependent epimerase/dehydratase family CTU_27160 PF08029 HisG, C-terminal domain CTU_27160 PF01634 ATP phosphoribosyltransferase CTU_27170 PF00815 Histidinol dehydrogenase CTU_27180 PF00155 Aminotransferase class I and II CTU_27190 PF00475 Imidazoleglycerol-phosphate dehydratase CTU_27200 PF00117 Glutamine amidotransferase class-I CTU_27210 PF00977 Histidine biosynthesis protein CTU_27220 PF00977 Histidine biosynthesis protein CTU_27230 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CTU_27230 PF01502 Phosphoribosyl-AMP cyclohydrolase CTU_27240 PF02706 Chain length determinant protein CTU_27250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CTU_27250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CTU_27290 PF02350 UDP-N-acetylglucosamine 2-epimerase CTU_27300 PF01370 NAD dependent epimerase/dehydratase family CTU_27310 PF08485 Polysaccharide biosynthesis protein C-terminal CTU_27310 PF02719 Polysaccharide biosynthesis protein CTU_27360 PF13439 Glycosyltransferase Family 4 CTU_27360 PF00534 Glycosyl transferases group 1 CTU_27370 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CTU_27380 PF01467 Cytidylyltransferase-like CTU_27390 PF00483 Nucleotidyl transferase CTU_27410 PF13439 Glycosyltransferase Family 4 CTU_27410 PF00534 Glycosyl transferases group 1 CTU_27420 PF04230 Polysaccharide pyruvyl transferase CTU_27440 PF02397 Bacterial sugar transferase CTU_27450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTU_27450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTU_27450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTU_27450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTU_27460 PF01050 Mannose-6-phosphate isomerase CTU_27460 PF00483 Nucleotidyl transferase CTU_27470 PF00534 Glycosyl transferases group 1 CTU_27470 PF13579 Glycosyl transferase 4-like domain CTU_27480 PF00293 NUDIX domain CTU_27490 PF01370 NAD dependent epimerase/dehydratase family CTU_27500 PF16363 GDP-mannose 4,6 dehydratase CTU_27510 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_27520 PF00535 Glycosyl transferase family 2 CTU_27540 PF13439 Glycosyltransferase Family 4 CTU_27540 PF00534 Glycosyl transferases group 1 CTU_27550 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_27560 PF00535 Glycosyl transferase family 2 CTU_27570 PF02706 Chain length determinant protein CTU_27570 PF13614 AAA domain CTU_27570 PF13807 G-rich domain on putative tyrosine kinase CTU_27580 PF01451 Low molecular weight phosphotyrosine protein phosphatase CTU_27590 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CTU_27590 PF10531 SLBB domain CTU_27590 PF02563 Polysaccharide biosynthesis/export protein CTU_27600 PF03741 Integral membrane protein TerC family CTU_27600 PF03471 Transporter associated domain CTU_27600 PF00571 CBS domain CTU_27610 PF05170 AsmA family CTU_27620 PF00692 dUTPase CTU_27630 PF00485 Phosphoribulokinase / Uridine kinase family CTU_27650 PF00563 EAL domain CTU_27650 PF00990 Diguanylate cyclase, GGDEF domain CTU_27650 PF05231 MASE1 CTU_27650 PF08447 PAS fold CTU_27650 PF08448 PAS fold CTU_27650 PF13426 PAS domain CTU_27660 PF06029 AlkA N-terminal domain CTU_27660 PF00730 HhH-GPD superfamily base excision DNA repair protein CTU_27670 PF00012 Hsp70 protein CTU_27690 PF05973 Phage derived protein Gp49-like (DUF891) CTU_27700 PF13533 Biotin-lipoyl like CTU_27710 PF00873 AcrB/AcrD/AcrF family CTU_27720 PF00873 AcrB/AcrD/AcrF family CTU_27730 PF07690 Major Facilitator Superfamily CTU_27740 PF00672 HAMP domain CTU_27740 PF00512 His Kinase A (phospho-acceptor) domain CTU_27740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_27750 PF00486 Transcriptional regulatory protein, C terminal CTU_27750 PF00072 Response regulator receiver domain CTU_27770 PF00781 Diacylglycerol kinase catalytic domain CTU_27780 PF01791 DeoC/LacD family aldolase CTU_27790 PF08543 Phosphomethylpyrimidine kinase CTU_27800 PF02110 Hydroxyethylthiazole kinase family CTU_27840 PF11776 Nickel/cobalt transporter regulator CTU_27850 PF00005 ABC transporter CTU_27850 PF16326 ABC transporter C-terminal domain CTU_27850 PF12848 ABC transporter CTU_27880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_27880 PF02203 Tar ligand binding domain homologue CTU_27880 PF00672 HAMP domain CTU_27890 PF00072 Response regulator receiver domain CTU_27890 PF04397 LytTr DNA-binding domain CTU_27900 PF06580 Histidine kinase CTU_27900 PF07694 5TMR of 5TMR-LYT CTU_27920 PF10609 NUBPL iron-transfer P-loop NTPase CTU_27940 PF01588 Putative tRNA binding domain CTU_27940 PF09334 tRNA synthetases class I (M) CTU_27950 PF13411 MerR HTH family regulatory protein CTU_27970 PF00528 Binding-protein-dependent transport system inner membrane component CTU_27980 PF00005 ABC transporter CTU_27990 PF00528 Binding-protein-dependent transport system inner membrane component CTU_28000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTU_28010 PF01915 Glycosyl hydrolase family 3 C-terminal domain CTU_28010 PF00933 Glycosyl hydrolase family 3 N terminal domain CTU_28010 PF14310 Fibronectin type III-like domain CTU_28020 PF09330 D-lactate dehydrogenase, membrane binding CTU_28020 PF01565 FAD binding domain CTU_28040 PF00768 D-alanyl-D-alanine carboxypeptidase CTU_28050 PF04893 Yip1 domain CTU_28060 PF09335 SNARE associated Golgi protein CTU_28090 PF00753 Metallo-beta-lactamase superfamily CTU_28100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_28100 PF03466 LysR substrate binding domain CTU_28110 PF01207 Dihydrouridine synthase (Dus) CTU_28120 PF01381 Helix-turn-helix CTU_28130 PF05973 Phage derived protein Gp49-like (DUF891) CTU_28140 PF03788 LrgA family CTU_28150 PF04172 LrgB-like family CTU_28160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTU_28160 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CTU_28170 PF02698 DUF218 domain CTU_28180 PF02653 Branched-chain amino acid transport system / permease component CTU_28190 PF00005 ABC transporter CTU_28200 PF13407 Periplasmic binding protein domain CTU_28210 PF00356 Bacterial regulatory proteins, lacI family CTU_28220 PF04235 Protein of unknown function (DUF418) CTU_28230 PF01227 GTP cyclohydrolase I CTU_28240 PF06779 Uncharacterised MFS-type transporter YbfB CTU_28250 PF00756 Putative esterase CTU_28260 PF00324 Amino acid permease CTU_28270 PF03466 LysR substrate binding domain CTU_28270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_28280 PF03601 Conserved hypothetical protein 698 CTU_28290 PF01261 Xylose isomerase-like TIM barrel CTU_28310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTU_28310 PF02378 Phosphotransferase system, EIIC CTU_28320 PF00294 pfkB family carbohydrate kinase CTU_28330 PF00381 PTS HPr component phosphorylation site CTU_28330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CTU_28340 PF07690 Major Facilitator Superfamily CTU_28350 PF03692 Putative zinc- or iron-chelating domain CTU_28360 PF09285 Elongation factor P, C-terminal CTU_28360 PF01132 Elongation factor P (EF-P) OB domain CTU_28360 PF08207 Elongation factor P (EF-P) KOW-like domain CTU_28370 PF03786 D-mannonate dehydratase (UxuA) CTU_28380 PF08125 Mannitol dehydrogenase C-terminal domain CTU_28380 PF01232 Mannitol dehydrogenase Rossmann domain CTU_28390 PF07683 Cobalamin synthesis protein cobW C-terminal domain CTU_28390 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTU_28400 PF01569 PAP2 superfamily CTU_28410 PF00877 NlpC/P60 family CTU_28420 PF12792 CSS motif domain associated with EAL CTU_28420 PF00563 EAL domain CTU_28430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_28440 PF00528 Binding-protein-dependent transport system inner membrane component CTU_28450 PF12911 N-terminal TM domain of oligopeptide transport permease C CTU_28450 PF00528 Binding-protein-dependent transport system inner membrane component CTU_28460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_28460 PF00005 ABC transporter CTU_28470 PF13989 YejG-like protein CTU_28490 PF07690 Major Facilitator Superfamily CTU_28500 PF00849 RNA pseudouridylate synthase CTU_28500 PF01479 S4 domain CTU_28510 PF00271 Helicase conserved C-terminal domain CTU_28510 PF04851 Type III restriction enzyme, res subunit CTU_28520 PF01386 Ribosomal L25p family CTU_28530 PF04245 37-kD nucleoid-associated bacterial protein CTU_28540 PF07208 Protein of unknown function (DUF1414) CTU_28550 PF00884 Sulfatase CTU_28550 PF11893 Domain of unknown function (DUF3413) CTU_28570 PF00486 Transcriptional regulatory protein, C terminal CTU_28570 PF00072 Response regulator receiver domain CTU_28580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_28580 PF00512 His Kinase A (phospho-acceptor) domain CTU_28600 PF00293 NUDIX domain CTU_28640 PF18113 Rubredoxin binding C-terminal domain CTU_28640 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_28650 PF00753 Metallo-beta-lactamase superfamily CTU_28650 PF00301 Rubredoxin CTU_28650 PF00258 Flavodoxin CTU_28660 PF00158 Sigma-54 interaction domain CTU_28660 PF01590 GAF domain CTU_28670 PF01740 STAS domain CTU_28670 PF00916 Sulfate permease family CTU_28680 PF00005 ABC transporter CTU_28690 PF13532 2OG-Fe(II) oxygenase superfamily CTU_28700 PF12833 Helix-turn-helix domain CTU_28700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTU_28700 PF02805 Metal binding domain of Ada CTU_28700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CTU_28710 PF02424 ApbE family CTU_28720 PF00267 Gram-negative porin CTU_28730 PF16359 RcsD-ABL domain CTU_28730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_28730 PF01627 Hpt domain CTU_28740 PF00072 Response regulator receiver domain CTU_28740 PF00196 Bacterial regulatory proteins, luxR family CTU_28750 PF00072 Response regulator receiver domain CTU_28750 PF09456 RcsC Alpha-Beta-Loop (ABL) CTU_28750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_28750 PF00512 His Kinase A (phospho-acceptor) domain CTU_28760 PF00521 DNA gyrase/topoisomerase IV, subunit A CTU_28760 PF03989 DNA gyrase C-terminal domain, beta-propeller CTU_28780 PF02867 Ribonucleotide reductase, barrel domain CTU_28780 PF03477 ATP cone domain CTU_28780 PF00317 Ribonucleotide reductase, all-alpha domain CTU_28790 PF00268 Ribonucleotide reductase, small chain CTU_28800 PF00111 2Fe-2S iron-sulfur cluster binding domain CTU_28810 PF03009 Glycerophosphoryl diester phosphodiesterase family CTU_28820 PF07690 Major Facilitator Superfamily CTU_28840 PF00994 Probable molybdopterin binding domain CTU_28850 PF07437 YfaZ precursor CTU_28860 PF00512 His Kinase A (phospho-acceptor) domain CTU_28860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_28860 PF08521 Two-component sensor kinase N-terminal CTU_28870 PF00486 Transcriptional regulatory protein, C terminal CTU_28870 PF00072 Response regulator receiver domain CTU_28900 PF01970 Tripartite tricarboxylate transporter TctA family CTU_28910 PF09997 Predicted membrane protein (DUF2238) CTU_28920 PF13193 AMP-binding enzyme C-terminal domain CTU_28920 PF00501 AMP-binding enzyme CTU_28930 PF13378 Enolase C-terminal domain-like CTU_28940 PF00378 Enoyl-CoA hydratase/isomerase CTU_28950 PF12697 Alpha/beta hydrolase family CTU_28960 PF16582 Middle domain of thiamine pyrophosphate CTU_28960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_28960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_28970 PF00425 chorismate binding enzyme CTU_28980 PF05957 Bacterial protein of unknown function (DUF883) CTU_28990 PF13673 Acetyltransferase (GNAT) domain CTU_29000 PF12706 Beta-lactamase superfamily domain CTU_29010 PF00361 Proton-conducting membrane transporter CTU_29020 PF00361 Proton-conducting membrane transporter CTU_29030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CTU_29030 PF00361 Proton-conducting membrane transporter CTU_29040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CTU_29050 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CTU_29060 PF12838 4Fe-4S dicluster domain CTU_29070 PF00146 NADH dehydrogenase CTU_29080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTU_29080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CTU_29080 PF00384 Molybdopterin oxidoreductase CTU_29080 PF01568 Molydopterin dinucleotide binding domain CTU_29090 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CTU_29090 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CTU_29090 PF10531 SLBB domain CTU_29110 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CTU_29110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CTU_29120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CTU_29130 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CTU_29150 PF03466 LysR substrate binding domain CTU_29150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_29160 PF00155 Aminotransferase class I and II CTU_29180 PF03600 Citrate transporter CTU_29180 PF02080 TrkA-C domain CTU_29190 PF13419 Haloacid dehalogenase-like hydrolase CTU_29200 PF03887 YfbU domain CTU_29210 PF04217 Protein of unknown function, DUF412 CTU_29220 PF00871 Acetokinase family CTU_29230 PF07085 DRTGG domain CTU_29230 PF01515 Phosphate acetyl/butaryl transferase CTU_29240 PF06643 Protein of unknown function (DUF1158) CTU_29250 PF12833 Helix-turn-helix domain CTU_29260 PF16295 Tetracyclin repressor-like, C-terminal domain CTU_29260 PF00440 Bacterial regulatory proteins, tetR family CTU_29270 PF00293 NUDIX domain CTU_29280 PF12850 Calcineurin-like phosphoesterase superfamily domain CTU_29290 PF14834 Glutathione S-transferase, C-terminal domain CTU_29290 PF02798 Glutathione S-transferase, N-terminal domain CTU_29300 PF02798 Glutathione S-transferase, N-terminal domain CTU_29300 PF00043 Glutathione S-transferase, C-terminal domain CTU_29310 PF01370 NAD dependent epimerase/dehydratase family CTU_29310 PF08338 Domain of unknown function (DUF1731) CTU_29340 PF00005 ABC transporter CTU_29350 PF00528 Binding-protein-dependent transport system inner membrane component CTU_29360 PF00528 Binding-protein-dependent transport system inner membrane component CTU_29370 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_29380 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_29390 PF02441 Flavoprotein CTU_29400 PF00156 Phosphoribosyl transferase domain CTU_29410 PF02674 Colicin V production protein CTU_29420 PF05036 Sporulation related domain CTU_29430 PF02875 Mur ligase family, glutamate ligase domain CTU_29430 PF08245 Mur ligase middle domain CTU_29440 PF01039 Carboxyl transferase domain CTU_29440 PF17848 Acetyl-coA carboxylase zinc finger domain CTU_29450 PF09335 SNARE associated Golgi protein CTU_29460 PF01416 tRNA pseudouridine synthase CTU_29470 PF02774 Semialdehyde dehydrogenase, dimerisation domain CTU_29470 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTU_29480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTU_29480 PF11890 Domain of unknown function (DUF3410) CTU_29480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTU_29500 PF00082 Subtilase family CTU_29500 PF12951 Passenger-associated-transport-repeat CTU_29500 PF03797 Autotransporter beta-domain CTU_29510 PF00109 Beta-ketoacyl synthase, N-terminal domain CTU_29510 PF02801 Beta-ketoacyl synthase, C-terminal domain CTU_29520 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CTU_29520 PF01266 FAD dependent oxidoreductase CTU_29530 PF02203 Tar ligand binding domain homologue CTU_29530 PF00672 HAMP domain CTU_29530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_29540 PF08891 YfcL protein CTU_29550 PF04315 Elongation factor P hydroxylase CTU_29560 PF01925 Sulfite exporter TauE/SafE CTU_29570 PF03411 Penicillin-insensitive murein endopeptidase CTU_29580 PF01264 Chorismate synthase CTU_29590 PF05175 Methyltransferase small domain CTU_29600 PF01713 Smr domain CTU_29610 PF00300 Histidine phosphatase superfamily (branch 1) CTU_29620 PF00378 Enoyl-CoA hydratase/isomerase CTU_29620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTU_29620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTU_29630 PF02803 Thiolase, C-terminal domain CTU_29630 PF00108 Thiolase, N-terminal domain CTU_29640 PF04175 Protein of unknown function (DUF406) CTU_29650 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CTU_29660 PF04333 MlaA lipoprotein CTU_29670 PF03918 Cytochrome C biogenesis protein CTU_29680 PF03918 Cytochrome C biogenesis protein CTU_29690 PF08534 Redoxin CTU_29700 PF01578 Cytochrome C assembly protein CTU_29700 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CTU_29710 PF03100 CcmE CTU_29720 PF04995 Heme exporter protein D (CcmD) CTU_29730 PF01578 Cytochrome C assembly protein CTU_29740 PF03379 CcmB protein CTU_29750 PF00005 ABC transporter CTU_29760 PF01226 Formate/nitrite transporter CTU_29790 PF01527 Transposase CTU_29800 PF04463 Protein of unknown function (DUF523) CTU_29840 PF00230 Major intrinsic protein CTU_29850 PF00106 short chain dehydrogenase CTU_29860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_29860 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_29860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_29870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_29870 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_29870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_29880 PF03306 Alpha-acetolactate decarboxylase CTU_29890 PF03466 LysR substrate binding domain CTU_29890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_29900 PF01544 CorA-like Mg2+ transporter protein CTU_29920 PF00155 Aminotransferase class I and II CTU_29930 PF07350 Protein of unknown function (DUF1479) CTU_29940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_29940 PF06580 Histidine kinase CTU_29940 PF07694 5TMR of 5TMR-LYT CTU_29950 PF04397 LytTr DNA-binding domain CTU_29950 PF00072 Response regulator receiver domain CTU_29960 PF02685 Glucokinase CTU_29970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_29970 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_29970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_29980 PF00248 Aldo/keto reductase family CTU_29990 PF10697 Protein of unknown function (DUF2502) CTU_30000 PF01566 Natural resistance-associated macrophage protein CTU_30010 PF07662 Na+ dependent nucleoside transporter C-terminus CTU_30010 PF07670 Nucleoside recognition CTU_30010 PF01773 Na+ dependent nucleoside transporter N-terminus CTU_30020 PF05231 MASE1 CTU_30020 PF00563 EAL domain CTU_30030 PF07037 Putative transcription regulator (DUF1323) CTU_30050 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTU_30070 PF12843 Putative quorum-sensing-regulated virulence factor CTU_30080 PF00533 BRCA1 C Terminus (BRCT) domain CTU_30080 PF12826 Helix-hairpin-helix motif CTU_30080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CTU_30080 PF03120 NAD-dependent DNA ligase OB-fold domain CTU_30080 PF01653 NAD-dependent DNA ligase adenylation domain CTU_30090 PF04354 ZipA, C-terminal FtsZ-binding domain CTU_30110 PF00291 Pyridoxal-phosphate dependent enzyme CTU_30130 PF00381 PTS HPr component phosphorylation site CTU_30140 PF00391 PEP-utilising enzyme, mobile domain CTU_30140 PF02896 PEP-utilising enzyme, TIM barrel domain CTU_30140 PF05524 PEP-utilising enzyme, N-terminal CTU_30150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CTU_30170 PF00291 Pyridoxal-phosphate dependent enzyme CTU_30180 PF00005 ABC transporter CTU_30190 PF00528 Binding-protein-dependent transport system inner membrane component CTU_30200 PF00528 Binding-protein-dependent transport system inner membrane component CTU_30220 PF04261 Dyp-type peroxidase family CTU_30230 PF06572 Protein of unknown function (DUF1131) CTU_30240 PF11143 Protein of unknown function (DUF2919) CTU_30250 PF04076 Bacterial OB fold (BOF) protein CTU_30260 PF00583 Acetyltransferase (GNAT) family CTU_30280 PF01520 N-acetylmuramoyl-L-alanine amidase CTU_30290 PF01218 Coproporphyrinogen III oxidase CTU_30300 PF01008 Initiation factor 2 subunit family CTU_30310 PF01008 Initiation factor 2 subunit family CTU_30320 PF01636 Phosphotransferase enzyme family CTU_30350 PF02653 Branched-chain amino acid transport system / permease component CTU_30360 PF00005 ABC transporter CTU_30370 PF00465 Iron-containing alcohol dehydrogenase CTU_30380 PF05977 Transmembrane secretion effector CTU_30410 PF04328 Selenoprotein, putative CTU_30420 PF13722 5TM C-terminal transporter carbon starvation CstA CTU_30420 PF02554 Carbon starvation protein CstA CTU_30430 PF03061 Thioesterase superfamily CTU_30450 PF00550 Phosphopantetheine attachment site CTU_30450 PF00857 Isochorismatase family CTU_30460 PF13193 AMP-binding enzyme C-terminal domain CTU_30460 PF00501 AMP-binding enzyme CTU_30470 PF00425 chorismate binding enzyme CTU_30480 PF01497 Periplasmic binding protein CTU_30490 PF05977 Transmembrane secretion effector CTU_30500 PF01032 FecCD transport family CTU_30510 PF01032 FecCD transport family CTU_30520 PF00005 ABC transporter CTU_30530 PF01515 Phosphate acetyl/butaryl transferase CTU_30530 PF00390 Malic enzyme, N-terminal domain CTU_30530 PF03949 Malic enzyme, NAD binding domain CTU_30540 PF00923 Transaldolase/Fructose-6-phosphate aldolase CTU_30550 PF00456 Transketolase, thiamine diphosphate binding domain CTU_30550 PF02779 Transketolase, pyrimidine binding domain CTU_30550 PF02780 Transketolase, C-terminal domain CTU_30600 PF06674 Protein of unknown function (DUF1176) CTU_30610 PF00293 NUDIX domain CTU_30620 PF00196 Bacterial regulatory proteins, luxR family CTU_30620 PF00072 Response regulator receiver domain CTU_30630 PF00873 AcrB/AcrD/AcrF family CTU_30650 PF03960 ArsC family CTU_30660 PF01546 Peptidase family M20/M25/M40 CTU_30660 PF07687 Peptidase dimerisation domain CTU_30670 PF13980 Uncharacterised protein family (UPF0370) CTU_30680 PF02230 Phospholipase/Carboxylesterase CTU_30690 PF05127 Helicase CTU_30690 PF17176 tRNA-binding domain CTU_30690 PF13718 GNAT acetyltransferase 2 CTU_30690 PF08351 Domain of unknown function (DUF1726) CTU_30700 PF04228 Putative neutral zinc metallopeptidase CTU_30710 PF01259 SAICAR synthetase CTU_30720 PF06804 NlpB/DapX lipoprotein CTU_30730 PF00701 Dihydrodipicolinate synthetase family CTU_30740 PF01842 ACT domain CTU_30750 PF00578 AhpC/TSA family CTU_30760 PF01594 AI-2E family transporter CTU_30770 PF01435 Peptidase family M48 CTU_30780 PF03960 ArsC family CTU_30790 PF00308 Bacterial dnaA protein CTU_30800 PF00860 Permease family CTU_30820 PF02769 AIR synthase related protein, C-terminal domain CTU_30820 PF00586 AIR synthase related protein, N-terminal domain CTU_30830 PF00551 Formyl transferase CTU_30840 PF13090 Polyphosphate kinase C-terminal domain 2 CTU_30840 PF17941 Polyphosphate kinase C-terminal domain 1 CTU_30840 PF02503 Polyphosphate kinase middle domain CTU_30840 PF13089 Polyphosphate kinase N-terminal domain CTU_30850 PF02541 Ppx/GppA phosphatase family CTU_30860 PF05231 MASE1 CTU_30860 PF00563 EAL domain CTU_30920 PF12833 Helix-turn-helix domain CTU_30920 PF02311 AraC-like ligand binding domain CTU_30940 PF01306 LacY proton/sugar symporter CTU_30950 PF07470 Glycosyl Hydrolase Family 88 CTU_30970 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CTU_30970 PF02278 Polysaccharide lyase family 8, super-sandwich domain CTU_30970 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CTU_30990 PF00117 Glutamine amidotransferase class-I CTU_30990 PF00958 GMP synthase C terminal domain CTU_30990 PF02540 NAD synthase CTU_31000 PF00571 CBS domain CTU_31000 PF00478 IMP dehydrogenase / GMP reductase domain CTU_31010 PF13742 OB-fold nucleic acid binding domain CTU_31010 PF02601 Exonuclease VII, large subunit CTU_31020 PF16485 Protealysin propeptide CTU_31020 PF02868 Thermolysin metallopeptidase, alpha-helical domain CTU_31020 PF01447 Thermolysin metallopeptidase, catalytic domain CTU_31040 PF07191 zinc-ribbons CTU_31050 PF01926 50S ribosome-binding GTPase CTU_31050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CTU_31060 PF13360 PQQ-like domain CTU_31070 PF09976 Tetratricopeptide repeat-like domain CTU_31080 PF13393 Histidyl-tRNA synthetase CTU_31080 PF03129 Anticodon binding domain CTU_31090 PF04551 GcpE protein CTU_31100 PF13464 Domain of unknown function (DUF4115) CTU_31110 PF04055 Radical SAM superfamily CTU_31120 PF00334 Nucleoside diphosphate kinase CTU_31130 PF00912 Transglycosylase CTU_31130 PF06832 Penicillin-Binding Protein C-terminus Family CTU_31130 PF00905 Penicillin binding protein transpeptidase domain CTU_31140 PF17962 Bacterial macroglobulin domain 6 CTU_31140 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CTU_31140 PF01835 MG2 domain CTU_31140 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CTU_31140 PF00207 Alpha-2-macroglobulin family CTU_31140 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CTU_31140 PF07678 A-macroglobulin TED domain CTU_31140 PF07703 Alpha-2-macroglobulin bait region domain CTU_31140 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CTU_31160 PF02378 Phosphotransferase system, EIIC CTU_31160 PF00367 phosphotransferase system, EIIB CTU_31160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CTU_31170 PF11975 Family 4 glycosyl hydrolase C-terminal domain CTU_31170 PF02056 Family 4 glycosyl hydrolase CTU_31180 PF00581 Rhodanese-like domain CTU_31190 PF01380 SIS domain CTU_31190 PF01418 Helix-turn-helix domain, rpiR family CTU_31220 PF07179 SseB protein N-terminal domain CTU_31220 PF14581 SseB protein C-terminal domain CTU_31230 PF00883 Cytosol aminopeptidase family, catalytic domain CTU_31230 PF12404 Peptidase CTU_31240 PF04384 Iron-sulphur cluster assembly CTU_31250 PF00111 2Fe-2S iron-sulfur cluster binding domain CTU_31260 PF00012 Hsp70 protein CTU_31270 PF07743 HSCB C-terminal oligomerisation domain CTU_31280 PF01521 Iron-sulphur cluster biosynthesis CTU_31290 PF01592 NifU-like N terminal domain CTU_31300 PF00266 Aminotransferase class-V CTU_31310 PF02082 Transcriptional regulator CTU_31320 PF00588 SpoU rRNA Methylase family CTU_31330 PF00459 Inositol monophosphatase family CTU_31340 PF03824 High-affinity nickel-transport protein CTU_31350 PF06226 Protein of unknown function (DUF1007) CTU_31360 PF00874 PRD domain CTU_31370 PF12832 MFS_1 like family CTU_31400 PF00464 Serine hydroxymethyltransferase CTU_31420 PF00175 Oxidoreductase NAD-binding domain CTU_31420 PF00042 Globin CTU_31420 PF00970 Oxidoreductase FAD-binding domain CTU_31430 PF00543 Nitrogen regulatory protein P-II CTU_31440 PF00158 Sigma-54 interaction domain CTU_31440 PF00072 Response regulator receiver domain CTU_31450 PF13942 YfhG lipoprotein CTU_31460 PF00512 His Kinase A (phospho-acceptor) domain CTU_31460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_31470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CTU_31470 PF02769 AIR synthase related protein, C-terminal domain CTU_31470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CTU_31480 PF14437 MafB19-like deaminase CTU_31500 PF00367 phosphotransferase system, EIIB CTU_31500 PF02378 Phosphotransferase system, EIIC CTU_31510 PF01380 SIS domain CTU_31520 PF01418 Helix-turn-helix domain, rpiR family CTU_31520 PF01380 SIS domain CTU_31530 PF12838 4Fe-4S dicluster domain CTU_31540 PF01648 4'-phosphopantetheinyl transferase superfamily CTU_31550 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CTU_31560 PF02565 Recombination protein O C terminal CTU_31560 PF11967 Recombination protein O N terminal CTU_31570 PF01926 50S ribosome-binding GTPase CTU_31570 PF07650 KH domain CTU_31580 PF14622 Ribonuclease-III-like CTU_31580 PF00035 Double-stranded RNA binding motif CTU_31590 PF10502 Signal peptidase, peptidase S26 CTU_31600 PF03144 Elongation factor Tu domain 2 CTU_31600 PF00009 Elongation factor Tu GTP binding domain CTU_31600 PF00679 Elongation factor G C-terminus CTU_31600 PF06421 GTP-binding protein LepA C-terminus CTU_31620 PF03888 MucB/RseB N-terminal domain CTU_31620 PF17188 MucB/RseB C-terminal domain CTU_31630 PF03872 Anti sigma-E protein RseA, N-terminal domain CTU_31630 PF03873 Anti sigma-E protein RseA, C-terminal domain CTU_31640 PF08281 Sigma-70, region 4 CTU_31640 PF04542 Sigma-70 region 2 CTU_31650 PF00890 FAD binding domain CTU_31650 PF02910 Fumarate reductase flavoprotein C-term CTU_31660 PF05175 Methyltransferase small domain CTU_31670 PF00271 Helicase conserved C-terminal domain CTU_31670 PF00270 DEAD/DEAH box helicase CTU_31680 PF01228 Glycine radical CTU_31690 PF03167 Uracil DNA glycosylase superfamily CTU_31700 PF00588 SpoU rRNA Methylase family CTU_31700 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTU_31710 PF00085 Thioredoxin CTU_31730 PF13607 Succinyl-CoA ligase like flavodoxin domain CTU_31730 PF13380 CoA binding domain CTU_31730 PF00583 Acetyltransferase (GNAT) family CTU_31740 PF13091 PLD-like domain CTU_31750 PF10043 Predicted periplasmic lipoprotein (DUF2279) CTU_31760 PF00083 Sugar (and other) transporter CTU_31780 PF00205 Thiamine pyrophosphate enzyme, central domain CTU_31780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTU_31780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTU_31810 PF07724 AAA domain (Cdc48 subfamily) CTU_31810 PF02861 Clp amino terminal domain, pathogenicity island component CTU_31810 PF17871 AAA lid domain CTU_31810 PF00004 ATPase family associated with various cellular activities (AAA) CTU_31810 PF10431 C-terminal, D2-small domain, of ClpB protein CTU_31830 PF00849 RNA pseudouridylate synthase CTU_31830 PF01479 S4 domain CTU_31840 PF13525 Outer membrane lipoprotein CTU_31860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CTU_31870 PF01817 Chorismate mutase type II CTU_31870 PF00800 Prephenate dehydratase CTU_31880 PF08450 SMP-30/Gluconolactonase/LRE-like region CTU_31890 PF01817 Chorismate mutase type II CTU_31890 PF02153 Prephenate dehydrogenase CTU_31900 PF00793 DAHP synthetase I family CTU_31930 PF01245 Ribosomal protein L19 CTU_31940 PF01746 tRNA (Guanine-1)-methyltransferase CTU_31950 PF05239 PRC-barrel domain CTU_31950 PF01782 RimM N-terminal domain CTU_31960 PF00886 Ribosomal protein S16 CTU_31970 PF02881 SRP54-type protein, helical bundle domain CTU_31970 PF00448 SRP54-type protein, GTPase domain CTU_31970 PF02978 Signal peptide binding domain CTU_31980 PF01578 Cytochrome C assembly protein CTU_31990 PF00571 CBS domain CTU_31990 PF03471 Transporter associated domain CTU_31990 PF01595 Cyclin M transmembrane N-terminal domain CTU_32000 PF01025 GrpE CTU_32010 PF01513 ATP-NAD kinase CTU_32020 PF02463 RecF/RecN/SMC N terminal domain CTU_32030 PF04355 SmpA / OmlA family CTU_32040 PF03658 RnfH family Ubiquitin CTU_32050 PF03364 Polyketide cyclase / dehydrase and lipid transport CTU_32060 PF01668 SmpB protein CTU_32070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_32070 PF00529 HlyD membrane-fusion protein of T1SS CTU_32080 PF00664 ABC transporter transmembrane region CTU_32080 PF00005 ABC transporter CTU_32230 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CTU_32240 PF07484 Phage Tail Collar Domain CTU_32460 PF05840 Bacteriophage replication gene A protein (GPA) CTU_32480 PF01258 Prokaryotic dksA/traR C4-type zinc finger CTU_32520 PF06892 Phage regulatory protein CII (CP76) CTU_32530 PF07022 Bacteriophage CI repressor helix-turn-helix domain CTU_32530 PF16452 Bacteriophage CI repressor C-terminal domain CTU_32540 PF02899 Phage integrase, N-terminal SAM-like domain CTU_32540 PF00589 Phage integrase family CTU_32560 PF13356 Arm DNA-binding domain CTU_32560 PF00589 Phage integrase family CTU_32570 PF13356 Arm DNA-binding domain CTU_32570 PF00589 Phage integrase family CTU_32670 PF02743 Cache domain CTU_32670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_32670 PF00672 HAMP domain CTU_32680 PF01679 Proteolipid membrane potential modulator CTU_32720 PF06610 L-alanine exporter CTU_32730 PF09400 Protein of unknown function (DUF2002) CTU_32740 PF05957 Bacterial protein of unknown function (DUF883) CTU_32760 PF00462 Glutaredoxin CTU_32770 PF07972 NrdI Flavodoxin like CTU_32780 PF08343 Ribonucleotide reductase N-terminal CTU_32780 PF02867 Ribonucleotide reductase, barrel domain CTU_32780 PF00317 Ribonucleotide reductase, all-alpha domain CTU_32790 PF00268 Ribonucleotide reductase, small chain CTU_32800 PF00571 CBS domain CTU_32800 PF00005 ABC transporter CTU_32810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTU_32820 PF07690 Major Facilitator Superfamily CTU_32830 PF01047 MarR family CTU_32840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTU_32840 PF00529 HlyD membrane-fusion protein of T1SS CTU_32850 PF07690 Major Facilitator Superfamily CTU_32860 PF03707 Bacterial signalling protein N terminal repeat CTU_32860 PF00563 EAL domain CTU_32860 PF00990 Diguanylate cyclase, GGDEF domain CTU_32870 PF02664 S-Ribosylhomocysteinase (LuxS) CTU_32880 PF04262 Glutamate-cysteine ligase CTU_32890 PF09335 SNARE associated Golgi protein CTU_32900 PF13419 Haloacid dehalogenase-like hydrolase CTU_32910 PF02599 Global regulator protein family CTU_32920 PF02272 DHHA1 domain CTU_32920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTU_32920 PF01411 tRNA synthetases class II (A) CTU_32930 PF02631 RecX family CTU_32940 PF00154 recA bacterial DNA recombination protein CTU_32950 PF02464 Competence-damaged protein CTU_32960 PF13406 Transglycosylase SLT domain CTU_32970 PF00005 ABC transporter CTU_32980 PF00528 Binding-protein-dependent transport system inner membrane component CTU_32990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTU_33010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_33010 PF00672 HAMP domain CTU_33010 PF02203 Tar ligand binding domain homologue CTU_33050 PF01624 MutS domain I CTU_33050 PF05188 MutS domain II CTU_33050 PF00488 MutS domain V CTU_33050 PF05192 MutS domain III CTU_33050 PF05190 MutS family domain IV CTU_33070 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CTU_33080 PF02441 Flavoprotein CTU_33090 PF01047 MarR family CTU_33100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_33100 PF03466 LysR substrate binding domain CTU_33110 PF07690 Major Facilitator Superfamily CTU_33130 PF04539 Sigma-70 region 3 CTU_33130 PF04545 Sigma-70, region 4 CTU_33130 PF00140 Sigma-70 factor, region 1.2 CTU_33130 PF04542 Sigma-70 region 2 CTU_33140 PF01551 Peptidase family M23 CTU_33140 PF01476 LysM domain CTU_33170 PF01975 Survival protein SurE CTU_33190 PF01142 tRNA pseudouridine synthase D (TruD) CTU_33200 PF02542 YgbB family CTU_33210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTU_33220 PF12084 Protein of unknown function (DUF3561) CTU_33240 PF00009 Elongation factor Tu GTP binding domain CTU_33250 PF01507 Phosphoadenosine phosphosulfate reductase family CTU_33260 PF10414 Sirohaem synthase dimerisation region CTU_33260 PF14824 Sirohaem biosynthesis protein central CTU_33260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTU_33270 PF04389 Peptidase family M28 CTU_33280 PF01507 Phosphoadenosine phosphosulfate reductase family CTU_33290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTU_33290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTU_33300 PF00667 FAD binding domain CTU_33300 PF00258 Flavodoxin CTU_33300 PF00175 Oxidoreductase NAD-binding domain CTU_33310 PF01242 6-pyruvoyl tetrahydropterin synthase CTU_33320 PF04055 Radical SAM superfamily CTU_33330 PF04536 TPM domain CTU_33340 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CTU_33350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CTU_33350 PF02378 Phosphotransferase system, EIIC CTU_33350 PF00367 phosphotransferase system, EIIB CTU_33360 PF01418 Helix-turn-helix domain, rpiR family CTU_33360 PF01380 SIS domain CTU_33400 PF03952 Enolase, N-terminal domain CTU_33400 PF00113 Enolase, C-terminal TIM barrel domain CTU_33410 PF06418 CTP synthase N-terminus CTU_33410 PF00117 Glutamine amidotransferase class-I CTU_33420 PF03819 MazG nucleotide pyrophosphohydrolase domain CTU_33430 PF04607 Region found in RelA / SpoT proteins CTU_33430 PF02824 TGS domain CTU_33430 PF13291 ACT domain CTU_33440 PF01938 TRAM domain CTU_33440 PF05958 tRNA (Uracil-5-)-methyltransferase CTU_33450 PF00512 His Kinase A (phospho-acceptor) domain CTU_33450 PF00072 Response regulator receiver domain CTU_33450 PF01627 Hpt domain CTU_33450 PF00672 HAMP domain CTU_33450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CTU_33450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_33460 PF00258 Flavodoxin CTU_33470 PF00849 RNA pseudouridylate synthase CTU_33480 PF04287 tRNA pseudouridine synthase C CTU_33500 PF07348 Syd protein (SUKH-2) CTU_33510 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CTU_33510 PF14489 QueF-like protein CTU_33520 PF11892 Domain of unknown function (DUF3412) CTU_33520 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CTU_33520 PF03641 Possible lysine decarboxylase CTU_33550 PF03315 Serine dehydratase beta chain CTU_33550 PF03313 Serine dehydratase alpha chain CTU_33560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CTU_33560 PF01367 5'-3' exonuclease, C-terminal SAM fold CTU_33570 PF18125 RlmM ferredoxin-like domain CTU_33570 PF01728 FtsJ-like methyltransferase CTU_33580 PF04241 Protein of unknown function (DUF423) CTU_33590 PF03466 LysR substrate binding domain CTU_33590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_33600 PF06004 Bacterial protein of unknown function (DUF903) CTU_33610 PF00266 Aminotransferase class-V CTU_33620 PF02657 Fe-S metabolism associated domain CTU_33630 PF00899 ThiF family CTU_33640 PF03562 MltA specific insert domain CTU_33640 PF06725 3D domain CTU_33650 PF11741 AMIN domain CTU_33650 PF01520 N-acetylmuramoyl-L-alanine amidase CTU_33670 PF00583 Acetyltransferase (GNAT) family CTU_33670 PF00696 Amino acid kinase family CTU_33680 PF13538 UvrD-like helicase C-terminal domain CTU_33690 PF12705 PD-(D/E)XK nuclease superfamily CTU_33690 PF13361 UvrD-like helicase C-terminal domain CTU_33690 PF00580 UvrD/REP helicase N-terminal domain CTU_33700 PF16187 Middle or third domain of peptidase_M16 CTU_33700 PF05193 Peptidase M16 inactive domain CTU_33700 PF00675 Insulinase (Peptidase family M16) CTU_33710 PF17946 RecC C-terminal domain CTU_33720 PF12528 Type II secretion prepilin peptidase dependent protein C CTU_33720 PF07963 Prokaryotic N-terminal methylation motif CTU_33730 PF10713 Protein of unknown function (DUF2509) CTU_33740 PF07963 Prokaryotic N-terminal methylation motif CTU_33750 PF07963 Prokaryotic N-terminal methylation motif CTU_33760 PF00303 Thymidylate synthase CTU_33770 PF01790 Prolipoprotein diacylglyceryl transferase CTU_33780 PF05524 PEP-utilising enzyme, N-terminal CTU_33780 PF01590 GAF domain CTU_33780 PF02896 PEP-utilising enzyme, TIM barrel domain CTU_33780 PF00391 PEP-utilising enzyme, mobile domain CTU_33790 PF00293 NUDIX domain CTU_33810 PF02976 DNA mismatch repair enzyme MutH CTU_33820 PF03741 Integral membrane protein TerC family CTU_33830 PF06004 Bacterial protein of unknown function (DUF903) CTU_33840 PF00248 Aldo/keto reductase family CTU_33850 PF07690 Major Facilitator Superfamily CTU_33860 PF00501 AMP-binding enzyme CTU_33860 PF01553 Acyltransferase CTU_33870 PF00356 Bacterial regulatory proteins, lacI family CTU_33890 PF00392 Bacterial regulatory proteins, gntR family CTU_33890 PF07729 FCD domain CTU_33900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTU_33910 PF00232 Glycosyl hydrolase family 1 CTU_33920 PF02378 Phosphotransferase system, EIIC CTU_33930 PF00356 Bacterial regulatory proteins, lacI family CTU_33940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CTU_33940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CTU_33950 PF03466 LysR substrate binding domain CTU_33950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_33960 PF01177 Asp/Glu/Hydantoin racemase CTU_33980 PF02706 Chain length determinant protein CTU_33990 PF00528 Binding-protein-dependent transport system inner membrane component CTU_34000 PF00528 Binding-protein-dependent transport system inner membrane component CTU_34010 PF00005 ABC transporter CTU_34010 PF03459 TOBE domain CTU_34010 PF17912 MalK OB fold domain CTU_34040 PF14583 Oligogalacturonate lyase CTU_34050 PF06178 Oligogalacturonate-specific porin protein (KdgM) CTU_34080 PF00108 Thiolase, N-terminal domain CTU_34080 PF02803 Thiolase, C-terminal domain CTU_34090 PF15977 Winged helix-turn-helix DNA binding CTU_34100 PF01810 LysE type translocator CTU_34250 PF03245 Bacteriophage Rz lysis protein CTU_34260 PF00959 Phage lysozyme CTU_34360 PF01551 Peptidase family M23 CTU_34360 PF01476 LysM domain CTU_34370 PF00152 tRNA synthetases class II (D, K and N) CTU_34370 PF01336 OB-fold nucleic acid binding domain CTU_34380 PF00472 RF-1 domain CTU_34380 PF03462 PCRF domain CTU_34400 PF02272 DHHA1 domain CTU_34400 PF17768 RecJ OB domain CTU_34400 PF01368 DHH family CTU_34410 PF13098 Thioredoxin-like domain CTU_34410 PF10411 Disulfide bond isomerase protein N-terminus CTU_34420 PF00589 Phage integrase family CTU_34420 PF02899 Phage integrase, N-terminal SAM-like domain CTU_34430 PF00258 Flavodoxin CTU_34440 PF07254 Membrane-bound toxin component of toxin-antitoxin system CTU_34450 PF03937 Flavinator of succinate dehydrogenase CTU_34460 PF01571 Aminomethyltransferase folate-binding domain CTU_34470 PF03006 Haemolysin-III related CTU_34490 PF01418 Helix-turn-helix domain, rpiR family CTU_34490 PF01380 SIS domain CTU_34500 PF00232 Glycosyl hydrolase family 1 CTU_34520 PF02347 Glycine cleavage system P-protein CTU_34530 PF01597 Glycine cleavage H-protein CTU_34540 PF08669 Glycine cleavage T-protein C-terminal barrel domain CTU_34540 PF01571 Aminomethyltransferase folate-binding domain CTU_34560 PF01494 FAD binding domain CTU_34570 PF01494 FAD binding domain CTU_34580 PF00557 Metallopeptidase family M24 CTU_34580 PF05195 Aminopeptidase P, N-terminal domain CTU_34590 PF03695 Uncharacterised protein family (UPF0149) CTU_34600 PF05164 Cell division protein ZapA CTU_34610 PF01812 5-formyltetrahydrofolate cyclo-ligase family CTU_34620 PF01842 ACT domain CTU_34620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTU_34620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTU_34630 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CTU_34640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_34640 PF03466 LysR substrate binding domain CTU_34650 PF04402 Protein of unknown function (DUF541) CTU_34660 PF01810 LysE type translocator CTU_34670 PF00924 Mechanosensitive ion channel CTU_34670 PF05552 Conserved TM helix CTU_34680 PF01116 Fructose-bisphosphate aldolase class-II CTU_34690 PF00162 Phosphoglycerate kinase CTU_34700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CTU_34700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTU_34710 PF03747 ADP-ribosylglycohydrolase CTU_34720 PF00456 Transketolase, thiamine diphosphate binding domain CTU_34720 PF02779 Transketolase, pyrimidine binding domain CTU_34720 PF02780 Transketolase, C-terminal domain CTU_34730 PF01435 Peptidase family M48 CTU_34740 PF00491 Arginase family CTU_34750 PF17810 Arginine decarboxylase helical bundle domain CTU_34750 PF17944 Arginine decarboxylase C-terminal helical extension CTU_34750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CTU_34770 PF02772 S-adenosylmethionine synthetase, central domain CTU_34770 PF00438 S-adenosylmethionine synthetase, N-terminal domain CTU_34770 PF02773 S-adenosylmethionine synthetase, C-terminal domain CTU_34780 PF00083 Sugar (and other) transporter CTU_34790 PF10263 SprT-like family CTU_34790 PF17283 SprT-like zinc ribbon domain CTU_34800 PF04231 Endonuclease I CTU_34810 PF04452 RNA methyltransferase CTU_34820 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CTU_34820 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CTU_34830 PF02622 Uncharacterized ACR, COG1678 CTU_34840 PF03652 Holliday junction resolvase CTU_34870 PF00437 Type II/IV secretion system protein CTU_34880 PF01168 Alanine racemase, N-terminal domain CTU_34890 PF02325 YGGT family CTU_34900 PF02594 Uncharacterised ACR, YggU family COG1872 CTU_34910 PF01725 Ham1 family CTU_34920 PF06969 HemN C-terminal domain CTU_34920 PF04055 Radical SAM superfamily CTU_34930 PF00394 Multicopper oxidase CTU_34930 PF07731 Multicopper oxidase CTU_34930 PF07732 Multicopper oxidase CTU_34940 PF01553 Acyltransferase CTU_34950 PF00521 DNA gyrase/topoisomerase IV, subunit A CTU_34950 PF03989 DNA gyrase C-terminal domain, beta-propeller CTU_34960 PF02525 Flavodoxin-like fold CTU_34970 PF03992 Antibiotic biosynthesis monooxygenase CTU_34980 PF00141 Peroxidase CTU_34990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_34990 PF03466 LysR substrate binding domain CTU_35000 PF00698 Acyl transferase domain CTU_35010 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CTU_35040 PF01039 Carboxyl transferase domain CTU_35050 PF06857 Malonate decarboxylase delta subunit (MdcD) CTU_35060 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CTU_35070 PF16957 Malonate decarboxylase, alpha subunit, transporter CTU_35080 PF00204 DNA gyrase B CTU_35080 PF00986 DNA gyrase B subunit, carboxyl terminus CTU_35080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_35080 PF01751 Toprim domain CTU_35090 PF05728 Uncharacterised protein family (UPF0227) CTU_35100 PF00149 Calcineurin-like phosphoesterase CTU_35110 PF06853 Protein of unknown function (DUF1249) CTU_35120 PF00293 NUDIX domain CTU_35130 PF02321 Outer membrane efflux protein CTU_35140 PF06693 Protein of unknown function (DUF1190) CTU_35150 PF03738 Glutathionylspermidine synthase preATP-grasp CTU_35160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CTU_35170 PF02535 ZIP Zinc transporter CTU_35180 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CTU_35190 PF04380 Membrane fusogenic activity CTU_35200 PF00294 pfkB family carbohydrate kinase CTU_35200 PF01467 Cytidylyltransferase-like CTU_35210 PF03710 Glutamate-ammonia ligase adenylyltransferase CTU_35210 PF08335 GlnD PII-uridylyltransferase CTU_35220 PF01928 CYTH domain CTU_35240 PF08239 Bacterial SH3 domain CTU_35250 PF01966 HD domain CTU_35250 PF12627 Probable RNA and SrmB- binding site of polymerase A CTU_35250 PF01743 Poly A polymerase head domain CTU_35260 PF02673 Bacitracin resistance protein BacA CTU_35270 PF02152 Dihydroneopterin aldolase CTU_35280 PF02660 Glycerol-3-phosphate acyltransferase CTU_35290 PF00814 Glycoprotease family CTU_35300 PF01165 Ribosomal protein S21 CTU_35310 PF01807 CHC2 zinc finger CTU_35310 PF08275 DNA primase catalytic core, N-terminal domain CTU_35310 PF08278 DNA primase DnaG DnaB-binding CTU_35310 PF10410 DnaB-helicase binding domain of primase CTU_35330 PF04539 Sigma-70 region 3 CTU_35330 PF04546 Sigma-70, non-essential region CTU_35330 PF04545 Sigma-70, region 4 CTU_35330 PF00140 Sigma-70 factor, region 1.2 CTU_35330 PF04542 Sigma-70 region 2 CTU_35330 PF03979 Sigma-70 factor, region 1.1 CTU_35350 PF03167 Uracil DNA glycosylase superfamily CTU_35380 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CTU_35390 PF00348 Polyprenyl synthetase CTU_35400 PF01070 FMN-dependent dehydrogenase CTU_35410 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CTU_35430 PF01593 Flavin containing amine oxidoreductase CTU_35450 PF02203 Tar ligand binding domain homologue CTU_35450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_35450 PF00672 HAMP domain CTU_35480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_35480 PF03466 LysR substrate binding domain CTU_35490 PF02554 Carbon starvation protein CstA CTU_35490 PF13722 5TM C-terminal transporter carbon starvation CstA CTU_35500 PF04328 Selenoprotein, putative CTU_35510 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTU_35510 PF07683 Cobalamin synthesis protein cobW C-terminal domain CTU_35550 PF11101 Protein of unknown function (DUF2884) CTU_35560 PF04320 Protein with unknown function (DUF469) CTU_35570 PF02390 Putative methyltransferase CTU_35580 PF14815 NUDIX domain CTU_35580 PF00730 HhH-GPD superfamily base excision DNA repair protein CTU_35580 PF00633 Helix-hairpin-helix motif CTU_35580 PF10576 Iron-sulfur binding domain of endonuclease III CTU_35590 PF04362 Bacterial Fe(2+) trafficking CTU_35600 PF01464 Transglycosylase SLT domain CTU_35600 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CTU_35610 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CTU_35620 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CTU_35630 PF04223 Citrate lyase, alpha subunit (CitF) CTU_35640 PF03328 HpcH/HpaI aldolase/citrate lyase family CTU_35650 PF06857 Malonate decarboxylase delta subunit (MdcD) CTU_35660 PF08218 Citrate lyase ligase C-terminal domain CTU_35660 PF00583 Acetyltransferase (GNAT) family CTU_35670 PF01557 Fumarylacetoacetate (FAA) hydrolase family CTU_35680 PF03390 2-hydroxycarboxylate transporter family CTU_35690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_35690 PF17203 Single cache domain 3 CTU_35700 PF12431 Transcriptional regulator CTU_35700 PF00072 Response regulator receiver domain CTU_35710 PF01276 Orn/Lys/Arg decarboxylase, major domain CTU_35710 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CTU_35710 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CTU_35730 PF04474 Protein of unknown function (DUF554) CTU_35810 PF12334 Rickettsia outer membrane protein B CTU_35810 PF03797 Autotransporter beta-domain CTU_35820 PF09997 Predicted membrane protein (DUF2238) CTU_35830 PF00356 Bacterial regulatory proteins, lacI family CTU_35850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTU_35860 PF02378 Phosphotransferase system, EIIC CTU_35870 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CTU_35880 PF02264 LamB porin CTU_35900 PF00924 Mechanosensitive ion channel CTU_35910 PF03350 Uncharacterized protein family, UPF0114 CTU_35950 PF08220 DeoR-like helix-turn-helix domain CTU_35950 PF00455 DeoR C terminal sensor domain CTU_35970 PF02472 Biopolymer transport protein ExbD/TolR CTU_35980 PF01618 MotA/TolQ/ExbB proton channel family CTU_35990 PF01053 Cys/Met metabolism PLP-dependent enzyme CTU_36000 PF09335 SNARE associated Golgi protein CTU_36010 PF06719 AraC-type transcriptional regulator N-terminus CTU_36010 PF12833 Helix-turn-helix domain CTU_36020 PF00465 Iron-containing alcohol dehydrogenase CTU_36030 PF00248 Aldo/keto reductase family CTU_36040 PF12883 Protein of unknown function (DUF3828) CTU_36060 PF13417 Glutathione S-transferase, N-terminal domain CTU_36060 PF04399 Glutaredoxin 2, C terminal domain CTU_36070 PF00440 Bacterial regulatory proteins, tetR family CTU_36080 PF00356 Bacterial regulatory proteins, lacI family CTU_36090 PF00367 phosphotransferase system, EIIB CTU_36090 PF02378 Phosphotransferase system, EIIC CTU_36100 PF11941 Domain of unknown function (DUF3459) CTU_36100 PF00128 Alpha amylase, catalytic domain CTU_36110 PF02525 Flavodoxin-like fold CTU_36120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_36120 PF03466 LysR substrate binding domain CTU_36130 PF13597 Anaerobic ribonucleoside-triphosphate reductase CTU_36130 PF03477 ATP cone domain CTU_36170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_36170 PF03466 LysR substrate binding domain CTU_36190 PF01048 Phosphorylase superfamily CTU_36210 PF07361 Cytochrome b562 CTU_36220 PF01523 Putative modulator of DNA gyrase CTU_36230 PF04751 Protein of unknown function (DUF615) CTU_36250 PF08245 Mur ligase middle domain CTU_36250 PF02875 Mur ligase family, glutamate ligase domain CTU_36250 PF01225 Mur ligase family, catalytic domain CTU_36260 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CTU_36270 PF00672 HAMP domain CTU_36270 PF02203 Tar ligand binding domain homologue CTU_36270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_36280 PF02653 Branched-chain amino acid transport system / permease component CTU_36290 PF02653 Branched-chain amino acid transport system / permease component CTU_36300 PF00005 ABC transporter CTU_36310 PF13407 Periplasmic binding protein domain CTU_36330 PF00719 Inorganic pyrophosphatase CTU_36340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_36340 PF00672 HAMP domain CTU_36380 PF00419 Fimbrial protein CTU_36390 PF00419 Fimbrial protein CTU_36420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTU_36420 PF02753 Pili assembly chaperone PapD, C-terminal domain CTU_36430 PF13953 PapC C-terminal domain CTU_36430 PF00577 Outer membrane usher protein CTU_36430 PF13954 PapC N-terminal domain CTU_36450 PF00419 Fimbrial protein CTU_36460 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CTU_36470 PF04357 TamB, inner membrane protein subunit of TAM complex CTU_36480 PF01103 Surface antigen CTU_36480 PF07244 Surface antigen variable number repeat CTU_36480 PF17243 POTRA domain TamA domain 1 CTU_36490 PF01625 Peptide methionine sulfoxide reductase CTU_36500 PF03471 Transporter associated domain CTU_36500 PF00571 CBS domain CTU_36500 PF01595 Cyclin M transmembrane N-terminal domain CTU_36510 PF06526 Protein of unknown function (DUF1107) CTU_36520 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CTU_36530 PF00459 Inositol monophosphatase family CTU_36540 PF02872 5'-nucleotidase, C-terminal domain CTU_36540 PF00149 Calcineurin-like phosphoesterase CTU_36550 PF01638 HxlR-like helix-turn-helix CTU_36560 PF05368 NmrA-like family CTU_36580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CTU_36580 PF02805 Metal binding domain of Ada CTU_36580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTU_36580 PF12833 Helix-turn-helix domain CTU_36600 PF00892 EamA-like transporter family CTU_36610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_36610 PF00672 HAMP domain CTU_36610 PF02203 Tar ligand binding domain homologue CTU_36630 PF01814 Hemerythrin HHE cation binding domain CTU_36630 PF04405 Domain of Unknown function (DUF542) CTU_36640 PF00324 Amino acid permease CTU_36650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CTU_36650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTU_36660 PF08525 Opacity-associated protein A N-terminal motif CTU_36660 PF04225 Opacity-associated protein A LysM-like domain CTU_36670 PF03948 Ribosomal protein L9, C-terminal domain CTU_36670 PF01281 Ribosomal protein L9, N-terminal domain CTU_36680 PF01084 Ribosomal protein S18 CTU_36690 PF00436 Single-strand binding protein family CTU_36700 PF01250 Ribosomal protein S6 CTU_36710 PF00326 Prolyl oligopeptidase family CTU_36720 PF07338 Protein of unknown function (DUF1471) CTU_36730 PF07338 Protein of unknown function (DUF1471) CTU_36740 PF02203 Tar ligand binding domain homologue CTU_36740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTU_36740 PF00672 HAMP domain CTU_36750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTU_36750 PF18158 Adaptive response protein AidB N-terminal domain CTU_36750 PF02770 Acyl-CoA dehydrogenase, middle domain CTU_36760 PF03738 Glutathionylspermidine synthase preATP-grasp CTU_36770 PF06693 Protein of unknown function (DUF1190) CTU_36780 PF03994 Domain of Unknown Function (DUF350) CTU_36790 PF00588 SpoU rRNA Methylase family CTU_36790 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTU_36800 PF00575 S1 RNA binding domain CTU_36800 PF17876 Cold shock domain CTU_36800 PF08461 Ribonuclease R winged-helix domain CTU_36800 PF08206 Ribonuclease B OB domain CTU_36800 PF00773 RNB domain CTU_36810 PF02082 Transcriptional regulator CTU_36820 PF00709 Adenylosuccinate synthetase CTU_36830 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CTU_36840 PF01145 SPFH domain / Band 7 family CTU_36850 PF12221 Bacterial membrane protein N terminal CTU_36850 PF01145 SPFH domain / Band 7 family CTU_36870 PF16360 GTP-binding GTPase Middle Region CTU_36870 PF01926 50S ribosome-binding GTPase CTU_36870 PF13167 GTP-binding GTPase N-terminal CTU_36880 PF17209 Hfq protein CTU_36900 PF01119 DNA mismatch repair protein, C-terminal domain CTU_36900 PF08676 MutL C terminal dimerisation domain CTU_36910 PF01520 N-acetylmuramoyl-L-alanine amidase CTU_36920 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CTU_36930 PF03853 YjeF-related protein N-terminus CTU_36930 PF01256 Carbohydrate kinase CTU_36940 PF08331 Domain of unknown function (DUF1730) CTU_36960 PF00929 Exonuclease CTU_36970 PF03193 RsgA GTPase CTU_36980 PF02666 Phosphatidylserine decarboxylase CTU_36990 PF12795 Mechanosensitive ion channel porin domain CTU_36990 PF00924 Mechanosensitive ion channel CTU_36990 PF12794 Mechanosensitive ion channel inner membrane domain 1 CTU_37000 PF00152 tRNA synthetases class II (D, K and N) CTU_37010 PF02910 Fumarate reductase flavoprotein C-term CTU_37010 PF00890 FAD binding domain CTU_37020 PF13085 2Fe-2S iron-sulfur cluster binding domain CTU_37020 PF13183 4Fe-4S dicluster domain CTU_37030 PF02300 Fumarate reductase subunit C CTU_37040 PF02313 Fumarate reductase subunit D CTU_37050 PF08212 Lipocalin-like domain CTU_37060 PF00893 Small Multidrug Resistance protein CTU_37080 PF00196 Bacterial regulatory proteins, luxR family CTU_37090 PF08085 Entericidin EcnA/B family CTU_37100 PF08085 Entericidin EcnA/B family CTU_37110 PF08207 Elongation factor P (EF-P) KOW-like domain CTU_37110 PF09285 Elongation factor P, C-terminal CTU_37110 PF01132 Elongation factor P (EF-P) OB domain CTU_37120 PF04055 Radical SAM superfamily CTU_37130 PF13698 Domain of unknown function (DUF4156) CTU_37140 PF00118 TCP-1/cpn60 chaperonin family CTU_37150 PF00166 Chaperonin 10 Kd subunit CTU_37160 PF04186 FxsA cytoplasmic membrane protein CTU_37170 PF10415 Fumarase C C-terminus CTU_37170 PF00206 Lyase CTU_37180 PF03605 Anaerobic c4-dicarboxylate membrane transporter CTU_37190 PF03091 CutA1 divalent ion tolerance protein CTU_37200 PF02683 Cytochrome C biogenesis protein transmembrane region CTU_37200 PF11412 Disulphide bond corrector protein DsbC CTU_37220 PF03824 High-affinity nickel-transport protein CTU_37230 PF02798 Glutathione S-transferase, N-terminal domain CTU_37240 PF04962 KduI/IolB family CTU_37250 PF03812 2-keto-3-deoxygluconate permease CTU_37260 PF13990 YjcZ-like protein CTU_37270 PF00350 Dynamin family CTU_37290 PF03831 PhnA domain CTU_37290 PF08274 PhnA Zinc-Ribbon CTU_37310 PF05845 Bacterial phosphonate metabolism protein (PhnH) CTU_37340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_37340 PF00183 Hsp90 protein CTU_37350 PF01848 Hok/gef family CTU_37370 PF00375 Sodium:dicarboxylate symporter family CTU_37380 PF13193 AMP-binding enzyme C-terminal domain CTU_37380 PF00501 AMP-binding enzyme CTU_37380 PF16177 Acetyl-coenzyme A synthetase N-terminus CTU_37390 PF04341 Protein of unknown function, DUF485 CTU_37400 PF00474 Sodium:solute symporter family CTU_37410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTU_37410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTU_37420 PF00999 Sodium/hydrogen exchanger family CTU_37430 PF00860 Permease family CTU_37440 PF13417 Glutathione S-transferase, N-terminal domain CTU_37450 PF09278 MerR, DNA binding CTU_37450 PF00376 MerR family regulatory protein CTU_37460 PF12833 Helix-turn-helix domain CTU_37470 PF00563 EAL domain CTU_37470 PF12792 CSS motif domain associated with EAL CTU_37480 PF15940 Family of unknown function CTU_37500 PF00990 Diguanylate cyclase, GGDEF domain CTU_37500 PF00072 Response regulator receiver domain CTU_37510 PF00436 Single-strand binding protein family CTU_37520 PF00005 ABC transporter CTU_37520 PF17755 UvrA DNA-binding domain CTU_37520 PF17760 UvrA interaction domain CTU_37530 PF17760 UvrA interaction domain CTU_37530 PF17755 UvrA DNA-binding domain CTU_37530 PF00005 ABC transporter CTU_37560 PF05860 haemagglutination activity domain CTU_37560 PF13332 Hemagglutinin repeat CTU_37560 PF13018 Extended Signal Peptide of Type V secretion system CTU_37560 PF04829 Pre-toxin domain with VENN motif CTU_37580 PF04237 YjbR CTU_37590 PF01894 Uncharacterised protein family UPF0047 CTU_37600 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CTU_37600 PF08479 POTRA domain, ShlB-type CTU_37600 PF17287 POTRA domain CTU_37610 PF00155 Aminotransferase class I and II CTU_37620 PF01168 Alanine racemase, N-terminal domain CTU_37620 PF00842 Alanine racemase, C-terminal domain CTU_37630 PF00772 DnaB-like helicase N terminal domain CTU_37630 PF03796 DnaB-like helicase C terminal domain CTU_37640 PF08240 Alcohol dehydrogenase GroES-like domain CTU_37640 PF00107 Zinc-binding dehydrogenase CTU_37650 PF09583 Phage shock protein G (Phageshock_PspG) CTU_37660 PF01207 Dihydrouridine synthase (Dus) CTU_37690 PF01475 Ferric uptake regulator family CTU_37700 PF05532 CsbD-like CTU_37710 PF01554 MatE CTU_37720 PF01726 LexA DNA binding domain CTU_37720 PF00717 Peptidase S24-like CTU_37730 PF01219 Prokaryotic diacylglycerol kinase CTU_37740 PF01553 Acyltransferase CTU_37750 PF01040 UbiA prenyltransferase family CTU_37760 PF07148 Maltose operon periplasmic protein precursor (MalM) CTU_37770 PF02264 LamB porin CTU_37780 PF17912 MalK OB fold domain CTU_37780 PF00005 ABC transporter CTU_37790 PF01547 Bacterial extracellular solute-binding protein CTU_37800 PF14785 Maltose transport system permease protein MalF P2 domain CTU_37800 PF00528 Binding-protein-dependent transport system inner membrane component CTU_37810 PF00528 Binding-protein-dependent transport system inner membrane component CTU_37830 PF14602 Hexapeptide repeat of succinyl-transferase CTU_37830 PF12804 MobA-like NTP transferase domain CTU_37830 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_37840 PF06082 Exopolysaccharide biosynthesis protein YbjH CTU_37850 PF06251 Capsule biosynthesis GfcC CTU_37860 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CTU_37870 PF11106 Exopolysaccharide production protein YjbE CTU_37890 PF00342 Phosphoglucose isomerase CTU_37900 PF00696 Amino acid kinase family CTU_37900 PF01842 ACT domain CTU_37910 PF10127 RNA repair pathway DNA polymerase beta family CTU_37920 PF01139 tRNA-splicing ligase RtcB CTU_37940 PF06956 Regulator of RNA terminal phosphate cyclase CTU_37940 PF00158 Sigma-54 interaction domain CTU_37950 PF01758 Sodium Bile acid symporter family CTU_37960 PF11656 YjbD family (DUF3811) CTU_37990 PF02690 Na+/Pi-cotransporter CTU_38000 PF02574 Homocysteine S-methyltransferase CTU_38000 PF00809 Pterin binding enzyme CTU_38000 PF02965 Vitamin B12 dependent methionine synthase, activation domain CTU_38000 PF02607 B12 binding domain CTU_38000 PF02310 B12 binding domain CTU_38010 PF01614 Bacterial transcriptional regulator CTU_38010 PF09339 IclR helix-turn-helix domain CTU_38020 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CTU_38030 PF00463 Isocitrate lyase family CTU_38040 PF01274 Malate synthase CTU_38050 PF04204 Homoserine O-succinyltransferase CTU_38070 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_38080 PF07369 Protein of unknown function (DUF1488) CTU_38090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CTU_38090 PF01488 Shikimate / quinate 5-dehydrogenase CTU_38090 PF08501 Shikimate dehydrogenase substrate binding domain CTU_38100 PF01300 Telomere recombination CTU_38110 PF01396 Topoisomerase DNA binding C4 zinc finger CTU_38120 PF04361 Protein of unknown function (DUF494) CTU_38130 PF02481 DNA recombination-mediator protein A CTU_38130 PF17782 DprA winged helix domain CTU_38140 PF01327 Polypeptide deformylase CTU_38150 PF02911 Formyl transferase, C-terminal domain CTU_38150 PF00551 Formyl transferase CTU_38160 PF01189 16S rRNA methyltransferase RsmB/F CTU_38160 PF01029 NusB family CTU_38170 PF02080 TrkA-C domain CTU_38170 PF02254 TrkA-N domain CTU_38180 PF01741 Large-conductance mechanosensitive channel, MscL CTU_38200 PF13411 MerR HTH family regulatory protein CTU_38210 PF09350 Domain of unknown function (DUF1992) CTU_38220 PF01196 Ribosomal protein L17 CTU_38230 PF01000 RNA polymerase Rpb3/RpoA insert domain CTU_38230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CTU_38230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CTU_38240 PF00163 Ribosomal protein S4/S9 N-terminal domain CTU_38240 PF01479 S4 domain CTU_38250 PF00411 Ribosomal protein S11 CTU_38260 PF00416 Ribosomal protein S13/S18 CTU_38270 PF00344 SecY translocase CTU_38280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CTU_38290 PF00327 Ribosomal protein L30p/L7e CTU_38300 PF03719 Ribosomal protein S5, C-terminal domain CTU_38300 PF00333 Ribosomal protein S5, N-terminal domain CTU_38310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CTU_38320 PF00347 Ribosomal protein L6 CTU_38330 PF00410 Ribosomal protein S8 CTU_38340 PF00253 Ribosomal protein S14p/S29e CTU_38350 PF00673 ribosomal L5P family C-terminus CTU_38350 PF00281 Ribosomal protein L5 CTU_38360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CTU_38360 PF00467 KOW motif CTU_38370 PF00238 Ribosomal protein L14p/L23e CTU_38380 PF00366 Ribosomal protein S17 CTU_38390 PF00831 Ribosomal L29 protein CTU_38400 PF00252 Ribosomal protein L16p/L10e CTU_38410 PF07650 KH domain CTU_38410 PF00189 Ribosomal protein S3, C-terminal domain CTU_38420 PF00237 Ribosomal protein L22p/L17e CTU_38430 PF00203 Ribosomal protein S19 CTU_38440 PF03947 Ribosomal Proteins L2, C-terminal domain CTU_38440 PF00181 Ribosomal Proteins L2, RNA binding domain CTU_38450 PF00276 Ribosomal protein L23 CTU_38460 PF00573 Ribosomal protein L4/L1 family CTU_38470 PF00297 Ribosomal protein L3 CTU_38480 PF00338 Ribosomal protein S10p/S20e CTU_38490 PF01478 Type IV leader peptidase family CTU_38500 PF00210 Ferritin-like domain CTU_38520 PF03143 Elongation factor Tu C-terminal domain CTU_38520 PF03144 Elongation factor Tu domain 2 CTU_38520 PF00009 Elongation factor Tu GTP binding domain CTU_38540 PF00009 Elongation factor Tu GTP binding domain CTU_38540 PF03764 Elongation factor G, domain IV CTU_38540 PF14492 Elongation Factor G, domain II CTU_38540 PF00679 Elongation factor G C-terminus CTU_38540 PF03144 Elongation factor Tu domain 2 CTU_38550 PF00177 Ribosomal protein S7p/S5e CTU_38560 PF00164 Ribosomal protein S12/S23 CTU_38570 PF04077 DsrH like protein CTU_38580 PF02635 DsrE/DsrF-like family CTU_38590 PF02635 DsrE/DsrF-like family CTU_38600 PF08348 YheO-like PAS domain CTU_38600 PF13309 HTH domain CTU_38610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CTU_38610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTU_38620 PF04102 SlyX CTU_38630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTU_38640 PF09526 Probable metal-binding protein (DUF2387) CTU_38650 PF00999 Sodium/hydrogen exchanger family CTU_38650 PF02254 TrkA-N domain CTU_38660 PF02525 Flavodoxin-like fold CTU_38670 PF12848 ABC transporter CTU_38670 PF00005 ABC transporter CTU_38680 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CTU_38690 PF14572 Phosphoribosyl synthetase-associated domain CTU_38690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CTU_38710 PF00561 alpha/beta hydrolase fold CTU_38720 PF06794 Uncharacterised protein family (UPF0270) CTU_38730 PF00485 Phosphoribulokinase / Uridine kinase family CTU_38740 PF02566 OsmC-like protein CTU_38750 PF13545 Crp-like helix-turn-helix domain CTU_38750 PF00027 Cyclic nucleotide-binding domain CTU_38760 PF12805 FUSC-like inner membrane protein yccS CTU_38770 PF00202 Aminotransferase class-III CTU_38780 PF00117 Glutamine amidotransferase class-I CTU_38790 PF02661 Fic/DOC family CTU_38800 PF10832 Protein of unknown function (DUF2559) CTU_38810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CTU_38820 PF07690 Major Facilitator Superfamily CTU_38830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTU_38830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_38830 PF18267 Rubredoxin NAD+ reductase C-terminal domain CTU_38830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTU_38830 PF04324 BFD-like [2Fe-2S] binding domain CTU_38840 PF13806 Rieske-like [2Fe-2S] domain CTU_38850 PF01226 Formate/nitrite transporter CTU_38860 PF10414 Sirohaem synthase dimerisation region CTU_38860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTU_38860 PF14824 Sirohaem biosynthesis protein central CTU_38870 PF13520 Amino acid permease CTU_38880 PF01380 SIS domain CTU_38890 PF01261 Xylose isomerase-like TIM barrel CTU_38900 PF00294 pfkB family carbohydrate kinase CTU_38910 PF07702 UTRA domain CTU_38910 PF00392 Bacterial regulatory proteins, gntR family CTU_38920 PF13978 Protein of unknown function (DUF4223) CTU_38930 PF00579 tRNA synthetases class I (W and Y) CTU_38940 PF13419 Haloacid dehalogenase-like hydrolase CTU_38950 PF00834 Ribulose-phosphate 3 epimerase family CTU_38960 PF02086 D12 class N6 adenine-specific DNA methyltransferase CTU_38970 PF05036 Sporulation related domain CTU_38980 PF01761 3-dehydroquinate synthase CTU_38990 PF01202 Shikimate kinase CTU_39000 PF00263 Bacterial type II and III secretion system protein CTU_39000 PF03958 Bacterial type II/III secretion system short domain CTU_39050 PF00905 Penicillin binding protein transpeptidase domain CTU_39050 PF00912 Transglycosylase CTU_39050 PF17092 Penicillin-binding protein OB-like domain CTU_39060 PF00293 NUDIX domain CTU_39070 PF07095 Intracellular growth attenuator protein IgaA CTU_39080 PF13419 Haloacid dehalogenase-like hydrolase CTU_39090 PF01479 S4 domain CTU_39100 PF01430 Hsp33 protein CTU_39110 PF13687 Domain of unknown function (DUF4153) CTU_39120 PF01293 Phosphoenolpyruvate carboxykinase CTU_39130 PF00672 HAMP domain CTU_39130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_39130 PF00512 His Kinase A (phospho-acceptor) domain CTU_39140 PF00072 Response regulator receiver domain CTU_39140 PF00486 Transcriptional regulatory protein, C terminal CTU_39150 PF01272 Transcription elongation factor, GreA/GreB, C-term CTU_39150 PF03449 Transcription elongation factor, N-terminal CTU_39160 PF00575 S1 RNA binding domain CTU_39160 PF09371 Tex-like protein N-terminal domain CTU_39160 PF16921 Tex protein YqgF-like domain CTU_39160 PF17674 HHH domain CTU_39180 PF04023 FeoA domain CTU_39190 PF07664 Ferrous iron transport protein B C terminus CTU_39190 PF07670 Nucleoside recognition CTU_39190 PF17910 FeoB cytosolic helical domain CTU_39190 PF02421 Ferrous iron transport protein B CTU_39200 PF09012 FeoC like transcriptional regulator CTU_39210 PF07338 Protein of unknown function (DUF1471) CTU_39220 PF00561 alpha/beta hydrolase fold CTU_39230 PF00156 Phosphoribosyl transferase domain CTU_39240 PF01106 NifU-like domain CTU_39240 PF01521 Iron-sulphur cluster biosynthesis CTU_39250 PF00313 'Cold-shock' DNA-binding domain CTU_39260 PF02446 4-alpha-glucanotransferase CTU_39270 PF00343 Carbohydrate phosphorylase CTU_39300 PF17874 MalT-like TPR region CTU_39300 PF00196 Bacterial regulatory proteins, luxR family CTU_39310 PF00455 DeoR C terminal sensor domain CTU_39310 PF08220 DeoR-like helix-turn-helix domain CTU_39320 PF01694 Rhomboid family CTU_39320 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CTU_39330 PF00581 Rhodanese-like domain CTU_39340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CTU_39340 PF01266 FAD dependent oxidoreductase CTU_39350 PF00563 EAL domain CTU_39350 PF00360 Phytochrome region CTU_39350 PF01590 GAF domain CTU_39350 PF00990 Diguanylate cyclase, GGDEF domain CTU_39370 PF00343 Carbohydrate phosphorylase CTU_39380 PF08323 Starch synthase catalytic domain CTU_39380 PF00534 Glycosyl transferases group 1 CTU_39390 PF00483 Nucleotidyl transferase CTU_39400 PF00128 Alpha amylase, catalytic domain CTU_39400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CTU_39400 PF18390 Glycogen debranching enzyme C-terminal domain CTU_39410 PF02806 Alpha amylase, C-terminal all-beta domain CTU_39410 PF00128 Alpha amylase, catalytic domain CTU_39410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CTU_39420 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTU_39420 PF02774 Semialdehyde dehydrogenase, dimerisation domain CTU_39430 PF01914 MarC family integral membrane protein CTU_39460 PF02447 GntP family permease CTU_39470 PF01202 Shikimate kinase CTU_39480 PF00356 Bacterial regulatory proteins, lacI family CTU_39480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CTU_39490 PF02678 Pirin CTU_39490 PF17954 Quercetinase C-terminal cupin domain CTU_39500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTU_39500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTU_39510 PF00583 Acetyltransferase (GNAT) family CTU_39530 PF10956 Protein of unknown function (DUF2756) CTU_39540 PF03009 Glycerophosphoryl diester phosphodiesterase family CTU_39550 PF17912 MalK OB fold domain CTU_39550 PF00005 ABC transporter CTU_39560 PF00528 Binding-protein-dependent transport system inner membrane component CTU_39570 PF00528 Binding-protein-dependent transport system inner membrane component CTU_39580 PF13416 Bacterial extracellular solute-binding protein CTU_39590 PF00005 ABC transporter CTU_39600 PF12399 Branched-chain amino acid ATP-binding cassette transporter CTU_39600 PF00005 ABC transporter CTU_39610 PF02653 Branched-chain amino acid transport system / permease component CTU_39610 PF11862 Domain of unknown function (DUF3382) CTU_39620 PF02653 Branched-chain amino acid transport system / permease component CTU_39630 PF13458 Periplasmic binding protein CTU_39650 PF12568 Acetyltransferase (GNAT) domain, PanZ CTU_39660 PF13458 Periplasmic binding protein CTU_39680 PF00202 Aminotransferase class-III CTU_39690 PF00392 Bacterial regulatory proteins, gntR family CTU_39690 PF00155 Aminotransferase class I and II CTU_39700 PF04542 Sigma-70 region 2 CTU_39700 PF04545 Sigma-70, region 4 CTU_39710 PF02687 FtsX-like permease family CTU_39710 PF18075 FtsX extracellular domain CTU_39720 PF00005 ABC transporter CTU_39730 PF02881 SRP54-type protein, helical bundle domain CTU_39730 PF00448 SRP54-type protein, GTPase domain CTU_39750 PF06611 Protein of unknown function (DUF1145) CTU_39770 PF07947 YhhN family CTU_39780 PF00403 Heavy-metal-associated domain CTU_39790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CTU_39810 PF03480 Bacterial extracellular solute-binding protein, family 7 CTU_39820 PF01206 Sulfurtransferase TusA CTU_39830 PF02592 Putative vitamin uptake transporter CTU_39840 PF08786 DcrB CTU_39850 PF07690 Major Facilitator Superfamily CTU_39860 PF01594 AI-2E family transporter CTU_39880 PF00891 O-methyltransferase domain CTU_39920 PF00550 Phosphopantetheine attachment site CTU_39950 PF07977 FabA-like domain CTU_40010 PF02801 Beta-ketoacyl synthase, C-terminal domain CTU_40010 PF00109 Beta-ketoacyl synthase, N-terminal domain CTU_40040 PF00109 Beta-ketoacyl synthase, N-terminal domain CTU_40040 PF02801 Beta-ketoacyl synthase, C-terminal domain CTU_40050 PF01648 4'-phosphopantetheinyl transferase superfamily CTU_40060 PF00877 NlpC/P60 family CTU_40070 PF00120 Glutamine synthetase, catalytic domain CTU_40080 PF00982 Glycosyltransferase family 20 CTU_40100 PF01384 Phosphate transporter family CTU_40110 PF10625 Universal stress protein B (UspB) CTU_40120 PF00582 Universal stress protein family CTU_40130 PF04445 Putative SAM-dependent methyltransferase CTU_40140 PF01432 Peptidase family M3 CTU_40150 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CTU_40160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTU_40160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTU_40200 PF04076 Bacterial OB fold (BOF) protein CTU_40220 PF03466 LysR substrate binding domain CTU_40220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_40230 PF03631 Virulence factor BrkB CTU_40240 PF07690 Major Facilitator Superfamily CTU_40240 PF00083 Sugar (and other) transporter CTU_40250 PF05170 AsmA family CTU_40260 PF00563 EAL domain CTU_40270 PF00294 pfkB family carbohydrate kinase CTU_40280 PF00675 Insulinase (Peptidase family M16) CTU_40280 PF05193 Peptidase M16 inactive domain CTU_40290 PF00375 Sodium:dicarboxylate symporter family CTU_40300 PF00672 HAMP domain CTU_40300 PF00990 Diguanylate cyclase, GGDEF domain CTU_40300 PF17154 Gammaproteobacterial periplasmic sensor domain CTU_40300 PF00563 EAL domain CTU_40310 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CTU_40320 PF01270 Glycosyl hydrolases family 8 CTU_40330 PF03170 Bacterial cellulose synthase subunit CTU_40340 PF07238 PilZ domain CTU_40340 PF03552 Cellulose synthase CTU_40340 PF00535 Glycosyl transferase family 2 CTU_40350 PF06564 Cellulose biosynthesis protein BcsQ CTU_40360 PF10945 Cellulose biosynthesis protein BcsR CTU_40380 PF10995 Cellulose biosynthesis GIL CTU_40390 PF11120 Cellulose biosynthesis protein BcsF CTU_40400 PF11658 Cellulose biosynthesis protein BcsG CTU_40420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_40420 PF00005 ABC transporter CTU_40430 PF00005 ABC transporter CTU_40430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTU_40440 PF12911 N-terminal TM domain of oligopeptide transport permease C CTU_40440 PF00528 Binding-protein-dependent transport system inner membrane component CTU_40450 PF00528 Binding-protein-dependent transport system inner membrane component CTU_40460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTU_40480 PF08019 Phosphoethanolamine transferase EptA/EptB CTU_40480 PF00884 Sulfatase CTU_40490 PF02566 OsmC-like protein CTU_40500 PF07690 Major Facilitator Superfamily CTU_40510 PF03797 Autotransporter beta-domain CTU_40520 PF03352 Methyladenine glycosylase CTU_40540 PF18364 Molybdopterin oxidoreductase N-terminal domain CTU_40540 PF01568 Molydopterin dinucleotide binding domain CTU_40540 PF00384 Molybdopterin oxidoreductase CTU_40550 PF13488 Glycine zipper CTU_40550 PF00691 OmpA family CTU_40560 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CTU_40570 PF00356 Bacterial regulatory proteins, lacI family CTU_40590 PF00294 pfkB family carbohydrate kinase CTU_40600 PF07690 Major Facilitator Superfamily CTU_40610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTU_40610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTU_40620 PF11254 Protein of unknown function (DUF3053) CTU_40640 PF01848 Hok/gef family CTU_40650 PF01381 Helix-turn-helix CTU_40660 PF05746 DALR anticodon binding domain CTU_40660 PF02092 Glycyl-tRNA synthetase beta subunit CTU_40670 PF02091 Glycyl-tRNA synthetase alpha subunit CTU_40680 PF13983 YsaB-like lipoprotein CTU_40690 PF01757 Acyltransferase family CTU_40710 PF00857 Isochorismatase family CTU_40720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CTU_40720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CTU_40750 PF13407 Periplasmic binding protein domain CTU_40760 PF00005 ABC transporter CTU_40770 PF02653 Branched-chain amino acid transport system / permease component CTU_40780 PF12833 Helix-turn-helix domain CTU_40790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CTU_40800 PF00128 Alpha amylase, catalytic domain CTU_40810 PF00155 Aminotransferase class I and II CTU_40820 PF13802 Galactose mutarotase-like CTU_40820 PF01055 Glycosyl hydrolases family 31 CTU_40880 PF00248 Aldo/keto reductase family CTU_40890 PF12804 MobA-like NTP transferase domain CTU_40890 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_40890 PF14602 Hexapeptide repeat of succinyl-transferase CTU_40900 PF02625 XdhC and CoxI family CTU_40900 PF13478 XdhC Rossmann domain CTU_40910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CTU_40910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CTU_40920 PF00941 FAD binding domain in molybdopterin dehydrogenase CTU_40920 PF03450 CO dehydrogenase flavoprotein C-terminal domain CTU_40930 PF01799 [2Fe-2S] binding domain CTU_40930 PF00111 2Fe-2S iron-sulfur cluster binding domain CTU_40930 PF10518 TAT (twin-arginine translocation) pathway signal sequence CTU_40950 PF00535 Glycosyl transferase family 2 CTU_40960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTU_40960 PF03466 LysR substrate binding domain CTU_40970 PF07690 Major Facilitator Superfamily CTU_40980 PF00107 Zinc-binding dehydrogenase CTU_40980 PF08240 Alcohol dehydrogenase GroES-like domain CTU_40990 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CTU_41010 PF02517 CPBP intramembrane metalloprotease CTU_41020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_41020 PF00512 His Kinase A (phospho-acceptor) domain CTU_41030 PF00072 Response regulator receiver domain CTU_41030 PF00486 Transcriptional regulatory protein, C terminal CTU_41050 PF00576 HIUase/Transthyretin family CTU_41080 PF02611 CDP-diacylglycerol pyrophosphatase CTU_41100 PF00365 Phosphofructokinase CTU_41110 PF16916 Dimerisation domain of Zinc Transporter CTU_41110 PF01545 Cation efflux family CTU_41120 PF07813 LTXXQ motif family protein CTU_41130 PF00072 Response regulator receiver domain CTU_41130 PF00486 Transcriptional regulatory protein, C terminal CTU_41140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_41140 PF16527 Two-component sensor protein CpxA, periplasmic domain CTU_41140 PF00672 HAMP domain CTU_41140 PF00512 His Kinase A (phospho-acceptor) domain CTU_41150 PF00588 SpoU rRNA Methylase family CTU_41160 PF06426 Serine acetyltransferase, N-terminal CTU_41160 PF00132 Bacterial transferase hexapeptide (six repeats) CTU_41170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CTU_41170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CTU_41180 PF02556 Preprotein translocase subunit SecB CTU_41190 PF00462 Glutaredoxin CTU_41200 PF00581 Rhodanese-like domain CTU_41210 PF01676 Metalloenzyme superfamily CTU_41210 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CTU_41220 PF01551 Peptidase family M23 CTU_41230 PF04748 Divergent polysaccharide deacetylase CTU_41250 PF00535 Glycosyl transferase family 2 CTU_41260 PF04932 O-Antigen ligase CTU_41270 PF00884 Sulfatase CTU_41280 PF08240 Alcohol dehydrogenase GroES-like domain CTU_41280 PF00107 Zinc-binding dehydrogenase CTU_41290 PF00155 Aminotransferase class I and II CTU_41300 PF01370 NAD dependent epimerase/dehydratase family CTU_41310 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CTU_41320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CTU_41330 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CTU_41340 PF00534 Glycosyl transferases group 1 CTU_41340 PF13439 Glycosyltransferase Family 4 CTU_41350 PF13439 Glycosyltransferase Family 4 CTU_41350 PF00534 Glycosyl transferases group 1 CTU_41360 PF00535 Glycosyl transferase family 2 CTU_41370 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CTU_41380 PF00535 Glycosyl transferase family 2 CTU_41390 PF01467 Cytidylyltransferase-like CTU_41400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CTU_41400 PF06827 Zinc finger found in FPG and IleRS CTU_41400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CTU_41410 PF00471 Ribosomal protein L33 CTU_41420 PF00830 Ribosomal L28 family CTU_41430 PF04002 RadC-like JAB domain CTU_41440 PF02441 Flavoprotein CTU_41440 PF04127 DNA / pantothenate metabolism flavoprotein CTU_41450 PF00692 dUTPase CTU_41460 PF00440 Bacterial regulatory proteins, tetR family CTU_41470 PF00156 Phosphoribosyl transferase domain CTU_41480 PF01138 3' exoribonuclease family, domain 1 CTU_41480 PF03725 3' exoribonuclease family, domain 2 CTU_41490 PF03755 YicC-like family, N-terminal region CTU_41490 PF08340 Domain of unknown function (DUF1732) CTU_41500 PF03458 UPF0126 domain CTU_41510 PF03120 NAD-dependent DNA ligase OB-fold domain CTU_41510 PF01653 NAD-dependent DNA ligase adenylation domain CTU_41530 PF00625 Guanylate kinase CTU_41540 PF01192 RNA polymerase Rpb6 CTU_41550 PF04607 Region found in RelA / SpoT proteins CTU_41550 PF13291 ACT domain CTU_41550 PF02824 TGS domain CTU_41560 PF00588 SpoU rRNA Methylase family CTU_41560 PF12105 SpoU, rRNA methylase, C-terminal CTU_41570 PF17191 RecG wedge domain CTU_41570 PF00270 DEAD/DEAH box helicase CTU_41570 PF00271 Helicase conserved C-terminal domain CTU_41590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTU_41590 PF02753 Pili assembly chaperone PapD, C-terminal domain CTU_41600 PF13953 PapC C-terminal domain CTU_41600 PF13954 PapC N-terminal domain CTU_41600 PF00577 Outer membrane usher protein CTU_41660 PF00860 Permease family CTU_41670 PF05170 AsmA family CTU_41680 PF00583 Acetyltransferase (GNAT) family CTU_41680 PF09500 Putative thioesterase (yiiD_Cterm) CTU_41690 PF02580 D-Tyr-tRNA(Tyr) deacylase CTU_41700 PF03631 Virulence factor BrkB CTU_41710 PF13419 Haloacid dehalogenase-like hydrolase CTU_41720 PF08220 DeoR-like helix-turn-helix domain CTU_41720 PF00455 DeoR C terminal sensor domain CTU_41730 PF00294 pfkB family carbohydrate kinase CTU_41740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CTU_41740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CTU_41750 PF01791 DeoC/LacD family aldolase CTU_41770 PF01263 Aldose 1-epimerase CTU_41780 PF01055 Glycosyl hydrolases family 31 CTU_41820 PF06178 Oligogalacturonate-specific porin protein (KdgM) CTU_41840 PF03951 Glutamine synthetase, beta-Grasp domain CTU_41840 PF00120 Glutamine synthetase, catalytic domain CTU_41850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTU_41850 PF00512 His Kinase A (phospho-acceptor) domain CTU_41850 PF00989 PAS fold CTU_41860 PF02954 Bacterial regulatory protein, Fis family CTU_41860 PF00072 Response regulator receiver domain CTU_41860 PF00158 Sigma-54 interaction domain CTU_41880 PF04055 Radical SAM superfamily CTU_41880 PF06969 HemN C-terminal domain CTU_41890 PF04220 Der GTPase activator (YihI) CTU_41900 PF01926 50S ribosome-binding GTPase CTU_41910 PF00476 DNA polymerase family A CTU_41910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CTU_41910 PF01612 3'-5' exonuclease CTU_41910 PF01367 5'-3' exonuclease, C-terminal SAM fold CTU_41930 PF01553 Acyltransferase CTU_41940 PF01323 DSBA-like thioredoxin domain CTU_41950 PF01636 Phosphotransferase enzyme family CTU_41960 PF06288 Protein of unknown function (DUF1040) CTU_41970 PF12804 MobA-like NTP transferase domain CTU_41980 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CTU_41990 PF00392 Bacterial regulatory proteins, gntR family CTU_41990 PF07729 FCD domain CTU_42000 PF07690 Major Facilitator Superfamily CTU_42010 PF00356 Bacterial regulatory proteins, lacI family CTU_42020 PF00294 pfkB family carbohydrate kinase CTU_42030 PF13407 Periplasmic binding protein domain CTU_42040 PF02653 Branched-chain amino acid transport system / permease component CTU_42050 PF00005 ABC transporter CTU_42060 PF05025 RbsD / FucU transport protein family CTU_42080 PF02705 K+ potassium transporter CTU_42090 PF17868 AAA lid domain CTU_42090 PF12592 Protein of unknown function (DUF3763) CTU_42090 PF07728 AAA domain (dynein-related subfamily) CTU_42100 PF05762 VWA domain containing CoxE-like protein CTU_42110 PF03590 Aspartate-ammonia ligase CTU_42120 PF01037 Lrp/AsnC ligand binding domain CTU_42130 PF00258 Flavodoxin Ctu_1p00070 PF07690 Major Facilitator Superfamily Ctu_1p00100 PF13280 WYL domain Ctu_1p00100 PF08279 HTH domain Ctu_1p00130 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system Ctu_1p00140 PF01381 Helix-turn-helix Ctu_1p00190 PF00440 Bacterial regulatory proteins, tetR family Ctu_1p00190 PF02909 Tetracyclin repressor-like, C-terminal domain Ctu_1p00200 PF07690 Major Facilitator Superfamily Ctu_1p00200 PF07690 Major Facilitator Superfamily Ctu_1p00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ctu_1p00210 PF03466 LysR substrate binding domain Ctu_1p00230 PF17074 Darcynin, domain of unknown function Ctu_1p00260 PF10798 Biofilm development protein YmgB/AriR Ctu_1p00280 PF10798 Biofilm development protein YmgB/AriR Ctu_1p00290 PF04940 Sensors of blue-light using FAD Ctu_1p00290 PF00563 EAL domain Ctu_1p00300 PF13411 MerR HTH family regulatory protein Ctu_1p00310 PF02666 Phosphatidylserine decarboxylase Ctu_1p00320 PF03595 Voltage-dependent anion channel Ctu_1p00330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ctu_1p00330 PF00672 HAMP domain Ctu_1p00330 PF02203 Tar ligand binding domain homologue Ctu_1p00370 PF00583 Acetyltransferase (GNAT) family Ctu_1p00380 PF03992 Antibiotic biosynthesis monooxygenase Ctu_1p00410 PF00561 alpha/beta hydrolase fold Ctu_1p00420 PF00367 phosphotransferase system, EIIB Ctu_1p00420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Ctu_1p00420 PF02378 Phosphotransferase system, EIIC Ctu_1p00430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Ctu_1p00430 PF13378 Enolase C-terminal domain-like Ctu_1p00450 PF01590 GAF domain Ctu_1p00450 PF00360 Phytochrome region Ctu_1p00450 PF00563 EAL domain Ctu_1p00450 PF00990 Diguanylate cyclase, GGDEF domain Ctu_1p00460 PF05638 Type VI secretion system effector, Hcp Ctu_1p00480 PF02386 Cation transport protein Ctu_1p00490 PF03960 ArsC family Ctu_1p00500 PF02040 Arsenical pump membrane protein Ctu_1p00510 PF01022 Bacterial regulatory protein, arsR family Ctu_1p00520 PF00701 Dihydrodipicolinate synthetase family Ctu_1p00530 PF00892 EamA-like transporter family Ctu_1p00550 PF13098 Thioredoxin-like domain Ctu_1p00560 PF10749 Protein of unknown function (DUF2534) Ctu_1p00590 PF10820 Protein of unknown function (DUF2543) Ctu_1p00600 PF00005 ABC transporter Ctu_1p00610 PF01032 FecCD transport family Ctu_1p00630 PF07690 Major Facilitator Superfamily Ctu_1p00640 PF00874 PRD domain Ctu_1p00640 PF03123 CAT RNA binding domain Ctu_1p00650 PF00367 phosphotransferase system, EIIB Ctu_1p00650 PF02378 Phosphotransferase system, EIIC Ctu_1p00650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Ctu_1p00660 PF00232 Glycosyl hydrolase family 1 Ctu_1p00690 PF00589 Phage integrase family Ctu_1p00690 PF02899 Phage integrase, N-terminal SAM-like domain Ctu_1p00720 PF00176 SNF2 family N-terminal domain Ctu_1p00720 PF00271 Helicase conserved C-terminal domain Ctu_1p00730 PF00106 short chain dehydrogenase Ctu_1p00780 PF01757 Acyltransferase family Ctu_1p00790 PF01757 Acyltransferase family Ctu_1p00800 PF00672 HAMP domain Ctu_1p00800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ctu_1p00800 PF02203 Tar ligand binding domain homologue Ctu_1p00820 PF01979 Amidohydrolase family Ctu_1p00850 PF00672 HAMP domain Ctu_1p00850 PF02203 Tar ligand binding domain homologue Ctu_1p00850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ctu_1p00920 PF00690 Cation transporter/ATPase, N-terminus Ctu_1p00920 PF00689 Cation transporting ATPase, C-terminus Ctu_1p00940 PF08007 Cupin superfamily protein Ctu_1p00960 PF00746 LPXTG cell wall anchor motif Ctu_1p00970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Ctu_1p00970 PF00128 Alpha amylase, catalytic domain Ctu_1p00980 PF00128 Alpha amylase, catalytic domain Ctu_1p00990 PF00128 Alpha amylase, catalytic domain Ctu_1p00990 PF11941 Domain of unknown function (DUF3459) Ctu_1p00990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Ctu_1p01000 PF07804 HipA-like C-terminal domain Ctu_1p01000 PF13657 HipA N-terminal domain Ctu_1p01040 PF04183 IucA / IucC family Ctu_1p01040 PF06276 Ferric iron reductase FhuF-like transporter Ctu_1p01060 PF04183 IucA / IucC family Ctu_1p01060 PF06276 Ferric iron reductase FhuF-like transporter Ctu_1p01070 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Ctu_1p01080 PF07715 TonB-dependent Receptor Plug Domain Ctu_1p01080 PF00593 TonB dependent receptor Ctu_1p01100 PF02195 ParB-like nuclease domain Ctu_1p01100 PF08775 ParB family Ctu_1p01110 PF18607 ParA helix turn helix domain Ctu_1p01110 PF13614 AAA domain Ctu_1p01130 PF01051 Initiator Replication protein Ctu_1p01150 PF17287 POTRA domain Ctu_1p01150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Ctu_1p01150 PF08479 POTRA domain, ShlB-type Ctu_1p01160 PF13332 Hemagglutinin repeat Ctu_1p01160 PF15605 Bacterial toxin 28 Ctu_1p01160 PF04829 Pre-toxin domain with VENN motif Ctu_1p01160 PF05860 haemagglutination activity domain Ctu_1p01220 PF05860 haemagglutination activity domain Ctu_1p01220 PF05594 Haemagluttinin repeat Ctu_1p01220 PF15526 Novel toxin 21 Ctu_1p01220 PF04829 Pre-toxin domain with VENN motif Ctu_1p01220 PF13332 Hemagglutinin repeat Ctu_1p01230 PF13332 Hemagglutinin repeat Ctu_1p01230 PF04829 Pre-toxin domain with VENN motif Ctu_1p01230 PF05860 haemagglutination activity domain Ctu_1p01320 PF13332 Hemagglutinin repeat Ctu_1p01320 PF04829 Pre-toxin domain with VENN motif Ctu_1p01330 PF13332 Hemagglutinin repeat Ctu_1p01330 PF05860 haemagglutination activity domain Ctu_1p01330 PF04829 Pre-toxin domain with VENN motif Ctu_1p01330 PF15526 Novel toxin 21 Ctu_1p01330 PF05594 Haemagluttinin repeat Ctu_2p00050 PF00565 Staphylococcal nuclease homologue Ctu_2p00140 PF02387 IncFII RepA protein family Ctu_2p00160 PF02357 Transcription termination factor nusG Ctu_2p00200 PF04956 TrbC/VIRB2 family Ctu_2p00210 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Ctu_2p00270 PF03524 Conjugal transfer protein Ctu_2p00280 PF03743 Bacterial conjugation TrbI-like protein Ctu_2p00290 PF00437 Type II/IV secretion system protein Ctu_3p00030 PF00589 Phage integrase family Ctu_3p00050 PF01051 Initiator Replication protein Ctu_3p00060 PF01051 Initiator Replication protein Ctu_3p00240 PF05857 TraX protein Ctu_3p00280 PF01850 PIN domain Ctu_3p00290 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Ctu_3p00320 PF07693 KAP family P-loop domain Ctu_3p00330 PF07693 KAP family P-loop domain Ctu_3p00360 PF01022 Bacterial regulatory protein, arsR family Ctu_3p00370 PF06953 Arsenical resistance operon trans-acting repressor ArsD Ctu_3p00380 PF02374 Anion-transporting ATPase Ctu_3p00390 PF02374 Anion-transporting ATPase Ctu_3p00400 PF02040 Arsenical pump membrane protein Ctu_3p00410 PF03960 ArsC family Ctu_3p00430 PF02374 Anion-transporting ATPase Ctu_3p00450 PF00230 Major intrinsic protein Ctu_3p00500 PF00672 HAMP domain Ctu_3p00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ctu_3p00500 PF00512 His Kinase A (phospho-acceptor) domain Ctu_3p00510 PF00072 Response regulator receiver domain Ctu_3p00510 PF00486 Transcriptional regulatory protein, C terminal Ctu_3p00520 PF05425 Copper resistance protein D Ctu_3p00530 PF04234 CopC domain Ctu_3p00540 PF05275 Copper resistance protein B precursor (CopB) Ctu_3p00550 PF07731 Multicopper oxidase Ctu_3p00550 PF07732 Multicopper oxidase Ctu_3p00550 PF00394 Multicopper oxidase Ctu_3p00560 PF00394 Multicopper oxidase Ctu_3p00560 PF07731 Multicopper oxidase Ctu_3p00560 PF07732 Multicopper oxidase Ctu_3p00580 PF08525 Opacity-associated protein A N-terminal motif Ctu_3p00580 PF01551 Peptidase family M23 Ctu_3p00580 PF01476 LysM domain Ctu_3p00600 PF04945 YHS domain Ctu_3p00620 PF00873 AcrB/AcrD/AcrF family Ctu_3p00630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Ctu_3p00650 PF11604 Copper binding periplasmic protein CusF Ctu_3p00660 PF02321 Outer membrane efflux protein Ctu_3p00670 PF00072 Response regulator receiver domain Ctu_3p00670 PF00486 Transcriptional regulatory protein, C terminal Ctu_3p00680 PF00512 His Kinase A (phospho-acceptor) domain Ctu_3p00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ctu_3p00680 PF00672 HAMP domain Ctu_3p00690 PF00512 His Kinase A (phospho-acceptor) domain Ctu_3p00690 PF00672 HAMP domain Ctu_3p00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase