CTU_00010 SM01228 CTU_00010 CTU_00100 SM00382 ATPases associated with a variety of cellular activities CTU_00190 SM00382 ATPases associated with a variety of cellular activities CTU_00320 SM00450 Rhodanese Homology Domain CTU_00360 SM01234 CTU_00360 CTU_00380 SM00382 ATPases associated with a variety of cellular activities CTU_00380 SM00760 Bacterial dnaA protein helix-turn-helix domain CTU_00390 SM00480 DNA polymerase III beta subunit CTU_00410 SM00387 Histidine kinase-like ATPases CTU_00410 SM00433 TopoisomeraseII CTU_00440 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_00440 SM00895 CTU_00440 CTU_00470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CTU_00550 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_00550 SM00866 CTU_00550 CTU_00810 SM00331 Sigma factor PP2C-like phosphatases CTU_00810 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CTU_00870 SM00382 ATPases associated with a variety of cellular activities CTU_00870 SM01086 C-terminal, D2-small domain, of ClpB protein CTU_00900 SM00248 ankyrin repeats CTU_01030 SM00248 ankyrin repeats CTU_01160 SM00860 SMI1 / KNR4 family CTU_01430 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_01480 SM00530 Helix-turn-helix XRE-family like proteins CTU_01490 SM00354 helix_turn _helix lactose operon repressor CTU_01540 SM01007 Class II Aldolase and Adducin N-terminal domain CTU_01580 SM00342 helix_turn_helix, arabinose operon control protein CTU_01590 SM00342 helix_turn_helix, arabinose operon control protein CTU_01640 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_01640 SM00895 CTU_01640 CTU_01660 SM00530 Helix-turn-helix XRE-family like proteins CTU_01730 SM00382 ATPases associated with a variety of cellular activities CTU_01730 SM01086 C-terminal, D2-small domain, of ClpB protein CTU_01760 SM00354 helix_turn _helix lactose operon repressor CTU_01770 SM00487 DEAD-like helicases superfamily CTU_01770 SM00490 helicase superfamily c-terminal domain CTU_01830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CTU_01830 SM00091 PAS domain CTU_01830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_01920 SM00859 Semialdehyde dehydrogenase, NAD binding domain CTU_02050 SM00382 ATPases associated with a variety of cellular activities CTU_02170 SM00487 DEAD-like helicases superfamily CTU_02170 SM00490 helicase superfamily c-terminal domain CTU_02190 SM00357 Cold shock protein domain CTU_02190 SM00382 ATPases associated with a variety of cellular activities CTU_02190 SM00959 Rho termination factor, N-terminal domain CTU_02230 SM00984 UDP binding domain CTU_02390 SM01219 CTU_02390 CTU_02530 SM00341 Helicase and RNase D C-terminal CTU_02530 SM00487 DEAD-like helicases superfamily CTU_02530 SM00490 helicase superfamily c-terminal domain CTU_02530 SM00956 CTU_02530 CTU_02720 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CTU_02890 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CTU_02890 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CTU_02900 SM00649 Ribosomal protein L11/L12 CTU_02950 SM00663 RNA polymerase I subunit A N-terminus CTU_02970 SM00342 helix_turn_helix, arabinose operon control protein CTU_03000 SM00876 Biotin and Thiamin Synthesis associated domain CTU_03110 SM00411 bacterial (prokaryotic) histone like domain CTU_03130 SM01209 CTU_03130 CTU_03130 SM01210 CTU_03130 CTU_03140 SM00798 AICARFT/IMPCHase bienzyme CTU_03140 SM00851 MGS-like domain CTU_03150 SM00382 ATPases associated with a variety of cellular activities CTU_03180 SM00062 Bacterial periplasmic substrate-binding proteins CTU_03240 SM00052 Putative diguanylate phosphodiesterase CTU_03240 SM00267 diguanylate cyclase CTU_03270 SM01057 Eukaryotic-type carbonic anhydrase CTU_03320 SM00878 Biotin carboxylase C-terminal domain CTU_03370 SM00829 Enoylreductase CTU_03380 SM00052 Putative diguanylate phosphodiesterase CTU_03380 SM00267 diguanylate cyclase CTU_03440 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_03570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTU_03580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTU_03650 SM00869 Autotransporter beta-domain CTU_03680 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_03690 SM00073 Histidine Phosphotransfer domain CTU_03690 SM00091 PAS domain CTU_03690 SM00387 Histidine kinase-like ATPases CTU_03690 SM00388 His Kinase A (phosphoacceptor) domain CTU_03690 SM00448 cheY-homologous receiver domain CTU_03770 SM00382 ATPases associated with a variety of cellular activities CTU_03830 SM00382 ATPases associated with a variety of cellular activities CTU_03970 SM00387 Histidine kinase-like ATPases CTU_03970 SM00388 His Kinase A (phosphoacceptor) domain CTU_03980 SM00448 cheY-homologous receiver domain CTU_03980 SM00862 Transcriptional regulatory protein, C terminal CTU_04010 SM01103 CTU_04010 CTU_04030 SM00382 ATPases associated with a variety of cellular activities CTU_04090 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_04130 SM01387 CTU_04130 CTU_04140 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_04140 SM00322 K homology RNA-binding domain CTU_04150 SM00028 Tetratricopeptide repeats CTU_04160 SM00487 DEAD-like helicases superfamily CTU_04160 SM00490 helicase superfamily c-terminal domain CTU_04290 SM00749 bacterial OsmY and nodulation domain CTU_04340 SM00420 helix_turn_helix, Deoxyribose operon repressor CTU_04340 SM01134 CTU_04340 CTU_04350 SM00829 Enoylreductase CTU_04450 SM00354 helix_turn _helix lactose operon repressor CTU_04460 SM00640 Glycosyl hydrolases family 32 CTU_04590 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_04590 SM00895 CTU_04590 CTU_04630 SM00858 CTU_04630 CTU_04760 SM00267 diguanylate cyclase CTU_04770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CTU_04770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_04790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_04790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_04820 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_05070 SM01120 CTU_05070 CTU_05090 SM00829 Enoylreductase CTU_05170 SM00421 helix_turn_helix, Lux Regulon CTU_05190 SM00507 HNH nucleases CTU_05290 SM00530 Helix-turn-helix XRE-family like proteins CTU_05410 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_05440 SM00382 ATPases associated with a variety of cellular activities CTU_05520 SM00354 helix_turn _helix lactose operon repressor CTU_05530 SM00347 helix_turn_helix multiple antibiotic resistance protein CTU_05570 SM00354 helix_turn _helix lactose operon repressor CTU_05650 SM00869 Autotransporter beta-domain CTU_05670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_05670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_05670 SM00319 Homologues of the ligand binding domain of Tar CTU_05680 SM00267 diguanylate cyclase CTU_05680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_05690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_05690 SM00267 diguanylate cyclase CTU_05720 SM00382 ATPases associated with a variety of cellular activities CTU_05750 SM00347 helix_turn_helix multiple antibiotic resistance protein CTU_05780 SM00421 helix_turn_helix, Lux Regulon CTU_05790 SM00421 helix_turn_helix, Lux Regulon CTU_05830 SM00267 diguanylate cyclase CTU_05900 SM00749 bacterial OsmY and nodulation domain CTU_05960 SM01133 CTU_05960 CTU_05970 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CTU_06030 SM00382 ATPases associated with a variety of cellular activities CTU_06040 SM00530 Helix-turn-helix XRE-family like proteins CTU_06050 SM00829 Enoylreductase CTU_06080 SM00382 ATPases associated with a variety of cellular activities CTU_06170 SM00382 ATPases associated with a variety of cellular activities CTU_06210 SM00855 Phosphoglycerate mutase family CTU_06220 SM00342 helix_turn_helix, arabinose operon control protein CTU_06220 SM00871 Bacterial transcription activator, effector binding domain CTU_06240 SM00448 cheY-homologous receiver domain CTU_06240 SM00862 Transcriptional regulatory protein, C terminal CTU_06250 SM00387 Histidine kinase-like ATPases CTU_06250 SM00388 His Kinase A (phosphoacceptor) domain CTU_06270 SM00448 cheY-homologous receiver domain CTU_06270 SM00862 Transcriptional regulatory protein, C terminal CTU_06360 SM00852 Probable molybdopterin binding domain CTU_06400 SM00271 DnaJ molecular chaperone homology domain CTU_06460 SM00495 Chitin-binding domain type 3 CTU_06460 SM00636 CTU_06460 CTU_06510 SM00904 Riboflavin kinase CTU_06570 SM01130 CTU_06570 CTU_06640 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_06640 SM00895 CTU_06640 CTU_06700 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CTU_06710 SM00851 MGS-like domain CTU_06710 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CTU_06830 SM00650 Ribosomal RNA adenine dimethylases CTU_06880 SM00271 DnaJ molecular chaperone homology domain CTU_06900 SM00487 DEAD-like helicases superfamily CTU_06900 SM00490 helicase superfamily c-terminal domain CTU_06910 SM00486 DNA polymerase type-B family CTU_06930 SM01007 Class II Aldolase and Adducin N-terminal domain CTU_06960 SM00342 helix_turn_helix, arabinose operon control protein CTU_06980 SM00382 ATPases associated with a variety of cellular activities CTU_07060 SM01329 CTU_07060 CTU_07070 SM00917 LeuA allosteric (dimerisation) domain CTU_07130 SM00354 helix_turn _helix lactose operon repressor CTU_07270 SM00842 Cell division protein FtsA CTU_07280 SM00864 Tubulin/FtsZ family, GTPase domain CTU_07280 SM00865 Tubulin/FtsZ family, C-terminal domain CTU_07320 SM00957 SecA DEAD-like domain CTU_07320 SM00958 SecA preprotein cross-linking domain CTU_07370 SM01240 CTU_07370 CTU_07390 SM00382 ATPases associated with a variety of cellular activities CTU_07420 SM00644 CTU_07420 CTU_07480 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_07480 SM00895 CTU_07480 CTU_07630 SM00564 beta-propeller repeat CTU_07650 SM00947 Carbonic anhydrase CTU_07660 SM00382 ATPases associated with a variety of cellular activities CTU_07790 SM00487 DEAD-like helicases superfamily CTU_07790 SM00490 helicase superfamily c-terminal domain CTU_07790 SM00847 Helicase associated domain (HA2) Add an annotation CTU_07820 SM00382 ATPases associated with a variety of cellular activities CTU_07910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTU_07920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTU_07950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTU_08040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTU_08060 SM00935 Outer membrane protein (OmpH-like) CTU_08120 SM00481 DNA polymerase alpha chain like domain CTU_08170 SM00977 TilS substrate C-terminal domain CTU_08210 SM01322 CTU_08210 CTU_08290 SM00382 ATPases associated with a variety of cellular activities CTU_08290 SM00930 CTU_08290 CTU_08350 SM00257 Lysin motif CTU_08360 SM00849 Metallo-beta-lactamase superfamily CTU_08390 SM00479 CTU_08390 CTU_08540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CTU_08700 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_08790 SM00342 helix_turn_helix, arabinose operon control protein CTU_08800 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTU_08860 SM00354 helix_turn _helix lactose operon repressor CTU_08870 SM01038 Beta galactosidase small chain CTU_08890 SM00919 Malic enzyme, NAD binding domain CTU_08890 SM01274 CTU_08890 CTU_09040 SM00382 ATPases associated with a variety of cellular activities CTU_09040 SM00930 CTU_09040 CTU_09150 SM00947 Carbonic anhydrase CTU_09160 SM00342 helix_turn_helix, arabinose operon control protein CTU_09170 SM00822 CTU_09170 CTU_09190 SM00052 Putative diguanylate phosphodiesterase CTU_09220 SM00420 helix_turn_helix, Deoxyribose operon repressor CTU_09220 SM01134 CTU_09220 CTU_09280 SM00822 CTU_09280 CTU_09290 SM00822 CTU_09290 CTU_09300 SM00342 helix_turn_helix, arabinose operon control protein CTU_09340 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_09340 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CTU_09380 SM00062 Bacterial periplasmic substrate-binding proteins CTU_09390 SM00382 ATPases associated with a variety of cellular activities CTU_09430 SM00563 Phosphate acyltransferases CTU_09440 SM01004 Delta-aminolevulinic acid dehydratase CTU_09460 SM00869 Autotransporter beta-domain CTU_09750 SM00448 cheY-homologous receiver domain CTU_09750 SM00862 Transcriptional regulatory protein, C terminal CTU_09760 SM00091 PAS domain CTU_09760 SM00387 Histidine kinase-like ATPases CTU_09760 SM00388 His Kinase A (phosphoacceptor) domain CTU_09790 SM00642 Alpha-amylase domain CTU_09850 SM01323 CTU_09850 CTU_09960 SM00861 Transketolase, pyrimidine binding domain CTU_09990 SM00981 CTU_09990 CTU_10180 SM00382 ATPases associated with a variety of cellular activities CTU_10180 SM00994 ClpX C4-type zinc finger CTU_10180 SM01086 C-terminal, D2-small domain, of ClpB protein CTU_10190 SM00382 ATPases associated with a variety of cellular activities CTU_10190 SM00464 Found in ATP-dependent protease La (LON) CTU_10200 SM00411 bacterial (prokaryotic) histone like domain CTU_10220 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTU_10280 SM00849 Metallo-beta-lactamase superfamily CTU_10360 SM00344 helix_turn_helix ASNC type CTU_10370 SM00382 ATPases associated with a variety of cellular activities CTU_10380 SM00382 ATPases associated with a variety of cellular activities CTU_10390 SM00938 Nitrogen regulatory protein P-II CTU_10440 SM00487 DEAD-like helicases superfamily CTU_10490 SM01101 CTU_10490 CTU_10550 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_10580 SM00052 Putative diguanylate phosphodiesterase CTU_10600 SM00382 ATPases associated with a variety of cellular activities CTU_10630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_10630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_10660 SM01266 CTU_10660 CTU_10770 SM00382 ATPases associated with a variety of cellular activities CTU_10790 SM00493 CTU_10790 CTU_10800 SM00387 Histidine kinase-like ATPases CTU_10930 SM00422 helix_turn_helix, mercury resistance CTU_10970 SM00244 prohibitin homologues CTU_10990 SM00822 CTU_10990 CTU_11010 SM00382 ATPases associated with a variety of cellular activities CTU_11030 SM00450 Rhodanese Homology Domain CTU_11050 SM00116 Domain in cystathionine beta-synthase and other proteins. CTU_11080 SM01001 AIR carboxylase CTU_11110 SM00840 CTU_11110 CTU_11120 SM00354 helix_turn _helix lactose operon repressor CTU_11380 SM00380 DNA-binding domain in plant proteins such as APETALA2 and EREBPs CTU_11410 SM00530 Helix-turn-helix XRE-family like proteins CTU_11420 SM00530 Helix-turn-helix XRE-family like proteins CTU_11960 SM00822 CTU_11960 CTU_12010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CTU_12020 SM00450 Rhodanese Homology Domain CTU_12110 SM00382 ATPases associated with a variety of cellular activities CTU_12110 SM01086 C-terminal, D2-small domain, of ClpB protein CTU_12280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_12280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_12340 SM00923 MbtH-like protein CTU_12350 SM00823 Phosphopantetheine attachment site CTU_12350 SM00824 Thioesterase CTU_12380 SM01007 Class II Aldolase and Adducin N-terminal domain CTU_12500 SM00382 ATPases associated with a variety of cellular activities CTU_12510 SM00642 Alpha-amylase domain CTU_12520 SM00642 Alpha-amylase domain CTU_12570 SM00357 Cold shock protein domain CTU_12610 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_12650 SM00936 Penicillin-binding protein 5, C-terminal domain CTU_12710 SM00855 Phosphoglycerate mutase family CTU_12770 SM00382 ATPases associated with a variety of cellular activities CTU_12800 SM00062 Bacterial periplasmic substrate-binding proteins CTU_12820 SM00116 Domain in cystathionine beta-synthase and other proteins. CTU_12820 SM01091 Transporter associated domain CTU_12860 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_12990 SM01081 Putative carbohydrate binding domain CTU_13100 SM00448 cheY-homologous receiver domain CTU_13100 SM00862 Transcriptional regulatory protein, C terminal CTU_13110 SM00387 Histidine kinase-like ATPases CTU_13110 SM00388 His Kinase A (phosphoacceptor) domain CTU_13190 SM00796 Allophanate hydrolase subunit 1 CTU_13200 SM00797 Allophanate hydrolase subunit 2 CTU_13260 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CTU_13260 SM01232 CTU_13260 CTU_13320 SM00861 Transketolase, pyrimidine binding domain CTU_13350 SM00881 CoA binding domain CTU_13360 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_13360 SM00866 CTU_13360 CTU_13380 SM00872 Alpha mannosidase, middle domain CTU_13550 SM00855 Phosphoglycerate mutase family CTU_13600 SM00382 ATPases associated with a variety of cellular activities CTU_13650 SM00382 ATPases associated with a variety of cellular activities CTU_13720 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_13720 SM00876 Biotin and Thiamin Synthesis associated domain CTU_13760 SM00382 ATPases associated with a variety of cellular activities CTU_13780 SM00487 DEAD-like helicases superfamily CTU_13780 SM00490 helicase superfamily c-terminal domain CTU_13810 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_13820 SM00852 Probable molybdopterin binding domain CTU_13880 SM00155 Phospholipase D. Active site motifs. CTU_13930 SM00382 ATPases associated with a variety of cellular activities CTU_13960 SM00487 DEAD-like helicases superfamily CTU_13960 SM00490 helicase superfamily c-terminal domain CTU_13980 SM00487 DEAD-like helicases superfamily CTU_13980 SM00488 CTU_13980 CTU_13980 SM00491 CTU_13980 CTU_14070 SM00903 Flavin reductase like domain CTU_14100 SM00382 ATPases associated with a variety of cellular activities CTU_14120 SM00062 Bacterial periplasmic substrate-binding proteins CTU_14120 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CTU_14190 SM00529 Helix-turn-helix diphteria tox regulatory element CTU_14250 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_14250 SM00866 CTU_14250 CTU_14270 SM00382 ATPases associated with a variety of cellular activities CTU_14280 SM00912 haemagglutination activity domain CTU_14330 SM00852 Probable molybdopterin binding domain CTU_14340 SM00382 ATPases associated with a variety of cellular activities CTU_14380 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_14410 SM00936 Penicillin-binding protein 5, C-terminal domain CTU_14420 SM00420 helix_turn_helix, Deoxyribose operon repressor CTU_14420 SM01134 CTU_14420 CTU_14430 SM00014 Acid phosphatase homologues CTU_14630 SM00382 ATPases associated with a variety of cellular activities CTU_14710 SM00342 helix_turn_helix, arabinose operon control protein CTU_14720 SM00062 Bacterial periplasmic substrate-binding proteins CTU_14720 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CTU_14750 SM00062 Bacterial periplasmic substrate-binding proteins CTU_14750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CTU_14760 SM00382 ATPases associated with a variety of cellular activities CTU_14790 SM00644 CTU_14790 CTU_14890 SM00382 ATPases associated with a variety of cellular activities CTU_14900 SM00357 Cold shock protein domain CTU_14920 SM00382 ATPases associated with a variety of cellular activities CTU_14920 SM01086 C-terminal, D2-small domain, of ClpB protein CTU_14940 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_14970 SM00382 ATPases associated with a variety of cellular activities CTU_14980 SM00382 ATPases associated with a variety of cellular activities CTU_15010 SM00344 helix_turn_helix ASNC type CTU_15020 SM00843 CTU_15020 CTU_15040 SM00382 ATPases associated with a variety of cellular activities CTU_15170 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_15180 SM00411 bacterial (prokaryotic) histone like domain CTU_15190 SM00849 Metallo-beta-lactamase superfamily CTU_15200 SM00382 ATPases associated with a variety of cellular activities CTU_15250 SM00344 helix_turn_helix ASNC type CTU_15350 SM00849 Metallo-beta-lactamase superfamily CTU_15440 SM01060 CTU_15440 CTU_15460 SM00382 ATPases associated with a variety of cellular activities CTU_15490 SM00062 Bacterial periplasmic substrate-binding proteins CTU_15540 SM00981 CTU_15540 CTU_15550 SM00382 ATPases associated with a variety of cellular activities CTU_15720 SM00851 MGS-like domain CTU_15730 SM00881 CoA binding domain CTU_15740 SM00992 Hemimethylated DNA-binding protein YccV like CTU_15750 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CTU_15880 SM00903 Flavin reductase like domain CTU_16130 SM00481 DNA polymerase alpha chain like domain CTU_16190 SM00421 helix_turn_helix, Lux Regulon CTU_16240 SM00506 Appr-1"-p processing enzyme CTU_16250 SM00155 Phospholipase D. Active site motifs. CTU_16330 SM00450 Rhodanese Homology Domain CTU_16340 SM00867 YceI-like domain CTU_16490 SM00858 CTU_16490 CTU_16580 SM00047 Lysozyme subfamily 2 CTU_16630 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_16640 SM00363 S4 RNA-binding domain CTU_16710 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CTU_16720 SM00822 CTU_16720 CTU_16740 SM00825 Beta-ketoacyl synthase CTU_16930 SM00257 Lysin motif CTU_16940 SM00487 DEAD-like helicases superfamily CTU_16940 SM00490 helicase superfamily c-terminal domain CTU_16940 SM00982 CTU_16940 CTU_16940 SM01058 CarD-like/TRCF domain CTU_16960 SM00382 ATPases associated with a variety of cellular activities CTU_17030 SM00382 ATPases associated with a variety of cellular activities CTU_17050 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CTU_17060 SM00387 Histidine kinase-like ATPases CTU_17060 SM00388 His Kinase A (phosphoacceptor) domain CTU_17070 SM00448 cheY-homologous receiver domain CTU_17070 SM00862 Transcriptional regulatory protein, C terminal CTU_17110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_17140 SM01329 CTU_17140 CTU_17190 SM00530 Helix-turn-helix XRE-family like proteins CTU_17200 SM00530 Helix-turn-helix XRE-family like proteins CTU_17300 SM00507 HNH nucleases CTU_17410 SM00507 HNH nucleases CTU_17600 SM00232 JAB/MPN domain CTU_17700 SM00530 Helix-turn-helix XRE-family like proteins CTU_17780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_17780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_17820 SM00357 Cold shock protein domain CTU_17860 SM00260 Two component signalling adaptor domain CTU_17860 SM00448 cheY-homologous receiver domain CTU_17980 SM00052 Putative diguanylate phosphodiesterase CTU_18000 SM00763 PrkA AAA domain CTU_18030 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTU_18070 SM00870 CTU_18070 CTU_18110 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CTU_18110 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CTU_18110 SM00493 CTU_18110 CTU_18230 SM00465 GIY-YIG type nucleases (URI domain) CTU_18270 SM01060 CTU_18270 CTU_18450 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CTU_18500 SM00873 B3/4 domain CTU_18500 SM00874 tRNA synthetase B5 domain CTU_18500 SM00896 Ferredoxin-fold anticodon binding domain CTU_18510 SM00411 bacterial (prokaryotic) histone like domain CTU_18540 SM00382 ATPases associated with a variety of cellular activities CTU_18580 SM00354 helix_turn _helix lactose operon repressor CTU_18660 SM01217 CTU_18660 CTU_18730 SM00382 ATPases associated with a variety of cellular activities CTU_18770 SM00257 Lysin motif CTU_18810 SM00869 Autotransporter beta-domain CTU_18840 SM00530 Helix-turn-helix XRE-family like proteins CTU_18860 SM01230 CTU_18860 CTU_18880 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_18880 SM00382 ATPases associated with a variety of cellular activities CTU_19050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_19090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_19180 SM00849 Metallo-beta-lactamase superfamily CTU_19340 SM00382 ATPases associated with a variety of cellular activities CTU_19340 SM01086 C-terminal, D2-small domain, of ClpB protein CTU_19640 SM00155 Phospholipase D. Active site motifs. CTU_19700 SM00354 helix_turn _helix lactose operon repressor CTU_19760 SM00354 helix_turn _helix lactose operon repressor CTU_19810 SM00479 CTU_19810 CTU_19920 SM00347 helix_turn_helix multiple antibiotic resistance protein CTU_19970 SM00363 S4 RNA-binding domain CTU_20010 SM00478 endonuclease III CTU_20010 SM00525 CTU_20010 CTU_20030 SM00900 CTU_20030 CTU_20170 SM00354 helix_turn _helix lactose operon repressor CTU_20230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_20230 SM00387 Histidine kinase-like ATPases CTU_20230 SM00388 His Kinase A (phosphoacceptor) domain CTU_20250 SM00822 CTU_20250 CTU_20260 SM00448 cheY-homologous receiver domain CTU_20260 SM00862 Transcriptional regulatory protein, C terminal CTU_20300 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CTU_20300 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CTU_20340 SM00100 Cyclic nucleotide-monophosphate binding domain CTU_20340 SM00419 helix_turn_helix, cAMP Regulatory protein CTU_20370 SM00463 Small MutS-related domain CTU_20410 SM00382 ATPases associated with a variety of cellular activities CTU_20460 SM00813 Alpha-L-arabinofuranosidase C-terminus CTU_20530 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_20550 SM00382 ATPases associated with a variety of cellular activities CTU_20690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_20740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_20740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_20870 SM00530 Helix-turn-helix XRE-family like proteins CTU_20880 SM00829 Enoylreductase CTU_20890 SM00382 ATPases associated with a variety of cellular activities CTU_20950 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_20950 SM00895 CTU_20950 CTU_20980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_20980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_20980 SM01358 CTU_20980 CTU_21000 SM00642 Alpha-amylase domain CTU_21020 SM00530 Helix-turn-helix XRE-family like proteins CTU_21060 SM00382 ATPases associated with a variety of cellular activities CTU_21180 SM00342 helix_turn_helix, arabinose operon control protein CTU_21200 SM00829 Enoylreductase CTU_21210 SM00822 CTU_21210 CTU_21230 SM00903 Flavin reductase like domain CTU_21270 SM00822 CTU_21270 CTU_21280 SM00342 helix_turn_helix, arabinose operon control protein CTU_21320 SM00052 Putative diguanylate phosphodiesterase CTU_21410 SM00873 B3/4 domain CTU_21420 SM00530 Helix-turn-helix XRE-family like proteins CTU_21450 SM00331 Sigma factor PP2C-like phosphatases CTU_21450 SM00448 cheY-homologous receiver domain CTU_21540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CTU_21540 SM00091 PAS domain CTU_21540 SM00387 Histidine kinase-like ATPases CTU_21540 SM00388 His Kinase A (phosphoacceptor) domain CTU_21540 SM00448 cheY-homologous receiver domain CTU_21570 SM00869 Autotransporter beta-domain CTU_21600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_21600 SM00267 diguanylate cyclase CTU_21610 SM00267 diguanylate cyclase CTU_21620 SM00267 diguanylate cyclase CTU_21650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_21650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_21650 SM00319 Homologues of the ligand binding domain of Tar CTU_21730 SM00347 helix_turn_helix multiple antibiotic resistance protein CTU_21740 SM00342 helix_turn_helix, arabinose operon control protein CTU_21800 SM00382 ATPases associated with a variety of cellular activities CTU_21850 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_21850 SM00895 CTU_21850 CTU_21860 SM00796 Allophanate hydrolase subunit 1 CTU_21860 SM00797 Allophanate hydrolase subunit 2 CTU_21860 SM00878 Biotin carboxylase C-terminal domain CTU_21930 SM00422 helix_turn_helix, mercury resistance CTU_21960 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_21960 SM00895 CTU_21960 CTU_22010 SM00829 Enoylreductase CTU_22030 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CTU_22090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_22100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_22180 SM00116 Domain in cystathionine beta-synthase and other proteins. CTU_22180 SM00382 ATPases associated with a variety of cellular activities CTU_22270 SM01022 CTU_22270 CTU_22310 SM00530 Helix-turn-helix XRE-family like proteins CTU_22400 SM01150 CTU_22400 CTU_22440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_22440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_22440 SM00319 Homologues of the ligand binding domain of Tar CTU_22450 SM00829 Enoylreductase CTU_22590 SM00347 helix_turn_helix multiple antibiotic resistance protein CTU_22640 SM00382 ATPases associated with a variety of cellular activities CTU_22640 SM00487 DEAD-like helicases superfamily CTU_22640 SM00490 helicase superfamily c-terminal domain CTU_22640 SM00847 Helicase associated domain (HA2) Add an annotation CTU_22730 SM00890 Domain of unknown function CTU_22760 SM00829 Enoylreductase CTU_22780 SM00382 ATPases associated with a variety of cellular activities CTU_22920 SM00052 Putative diguanylate phosphodiesterase CTU_23010 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CTU_23030 SM00091 PAS domain CTU_23030 SM00382 ATPases associated with a variety of cellular activities CTU_23060 SM00354 helix_turn _helix lactose operon repressor CTU_23070 SM00382 ATPases associated with a variety of cellular activities CTU_23160 SM00642 Alpha-amylase domain CTU_23210 SM00382 ATPases associated with a variety of cellular activities CTU_23250 SM00382 ATPases associated with a variety of cellular activities CTU_23260 SM00382 ATPases associated with a variety of cellular activities CTU_23290 SM00357 Cold shock protein domain CTU_23290 SM00955 CTU_23290 CTU_23300 SM00052 Putative diguanylate phosphodiesterase CTU_23300 SM00091 PAS domain CTU_23300 SM00267 diguanylate cyclase CTU_23360 SM00420 helix_turn_helix, Deoxyribose operon repressor CTU_23360 SM01134 CTU_23360 CTU_23400 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CTU_23410 SM00028 Tetratricopeptide repeats CTU_23430 SM00014 Acid phosphatase homologues CTU_23480 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CTU_23480 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CTU_23480 SM00493 CTU_23480 CTU_23510 SM00822 CTU_23510 CTU_23530 SM00363 S4 RNA-binding domain CTU_23550 SM00481 DNA polymerase alpha chain like domain CTU_23740 SM00155 Phospholipase D. Active site motifs. CTU_23770 SM00382 ATPases associated with a variety of cellular activities CTU_23780 SM00382 ATPases associated with a variety of cellular activities CTU_23860 SM00528 Domain in histone-like proteins of HNS family CTU_23880 SM00984 UDP binding domain CTU_23900 SM00448 cheY-homologous receiver domain CTU_23940 SM00530 Helix-turn-helix XRE-family like proteins CTU_23960 SM00342 helix_turn_helix, arabinose operon control protein CTU_24010 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_24040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_24040 SM00387 Histidine kinase-like ATPases CTU_24050 SM00421 helix_turn_helix, Lux Regulon CTU_24050 SM00448 cheY-homologous receiver domain CTU_24070 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_24090 SM00382 ATPases associated with a variety of cellular activities CTU_24120 SM01012 CTU_24120 CTU_24140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_24140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_24230 SM00937 CTU_24230 CTU_24270 SM01400 CTU_24270 CTU_24290 SM00422 helix_turn_helix, mercury resistance CTU_24390 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_24430 SM00382 ATPases associated with a variety of cellular activities CTU_24450 SM00354 helix_turn _helix lactose operon repressor CTU_24550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_24550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_24590 SM01091 Transporter associated domain CTU_24600 SM01005 Alanine racemase, C-terminal domain CTU_24630 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_24800 SM00341 Helicase and RNase D C-terminal CTU_24800 SM00474 3'-5' exonuclease CTU_24840 SM00487 DEAD-like helicases superfamily CTU_24840 SM00491 CTU_24840 CTU_24910 SM00849 Metallo-beta-lactamase superfamily CTU_24980 SM00052 Putative diguanylate phosphodiesterase CTU_24990 SM01091 Transporter associated domain CTU_25060 SM00357 Cold shock protein domain CTU_25110 SM00346 helix_turn_helix isocitrate lyase regulation CTU_25130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTU_25130 SM00245 tail specific protease CTU_25140 SM00945 ProQ/FINO family CTU_25150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_25260 SM00479 CTU_25260 CTU_25390 SM00257 Lysin motif CTU_25410 SM00382 ATPases associated with a variety of cellular activities CTU_25430 SM00382 ATPases associated with a variety of cellular activities CTU_25440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTU_25550 SM00257 Lysin motif CTU_25550 SM00749 bacterial OsmY and nodulation domain CTU_25610 SM00829 Enoylreductase CTU_25650 SM00836 DALR anticodon binding domain CTU_25650 SM01016 Arginyl tRNA synthetase N terminal dom CTU_25740 SM00448 cheY-homologous receiver domain CTU_25750 SM00448 cheY-homologous receiver domain CTU_25760 SM00138 Methyltransferase, chemotaxis proteins CTU_25780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_25780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_25780 SM00319 Homologues of the ligand binding domain of Tar CTU_25790 SM00972 Spore Coat Protein U domain CTU_25820 SM00972 Spore Coat Protein U domain CTU_25830 SM00972 Spore Coat Protein U domain CTU_25840 SM00260 Two component signalling adaptor domain CTU_25850 SM00073 Histidine Phosphotransfer domain CTU_25850 SM00260 Two component signalling adaptor domain CTU_25850 SM00387 Histidine kinase-like ATPases CTU_25850 SM01231 CTU_25850 CTU_25940 SM00382 ATPases associated with a variety of cellular activities CTU_26000 SM00342 helix_turn_helix, arabinose operon control protein CTU_26050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_26120 SM00357 Cold shock protein domain CTU_26150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTU_26150 SM00465 GIY-YIG type nucleases (URI domain) CTU_26160 SM00421 helix_turn_helix, Lux Regulon CTU_26160 SM00448 cheY-homologous receiver domain CTU_26190 SM00421 helix_turn_helix, Lux Regulon CTU_26200 SM00382 ATPases associated with a variety of cellular activities CTU_26230 SM00062 Bacterial periplasmic substrate-binding proteins CTU_26230 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CTU_26290 SM00861 Transketolase, pyrimidine binding domain CTU_26360 SM00028 Tetratricopeptide repeats CTU_26580 SM00382 ATPases associated with a variety of cellular activities CTU_26680 SM00421 helix_turn_helix, Lux Regulon CTU_26720 SM00267 diguanylate cyclase CTU_26780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTU_26850 SM00267 diguanylate cyclase CTU_26930 SM00052 Putative diguanylate phosphodiesterase CTU_26930 SM01034 Sensors of blue-light using FAD CTU_26960 SM00990 CTU_26960 CTU_27070 SM00871 Bacterial transcription activator, effector binding domain CTU_27080 SM00936 Penicillin-binding protein 5, C-terminal domain CTU_27100 SM00479 CTU_27100 CTU_27250 SM01350 CTU_27250 CTU_27580 SM00226 Low molecular weight phosphatase family CTU_27600 SM01091 Transporter associated domain CTU_27650 SM00052 Putative diguanylate phosphodiesterase CTU_27650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CTU_27650 SM00091 PAS domain CTU_27650 SM00267 diguanylate cyclase CTU_27660 SM00478 endonuclease III CTU_27660 SM01009 AlkA N-terminal domain CTU_27680 SM00530 Helix-turn-helix XRE-family like proteins CTU_27740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_27740 SM00387 Histidine kinase-like ATPases CTU_27740 SM00388 His Kinase A (phosphoacceptor) domain CTU_27750 SM00448 cheY-homologous receiver domain CTU_27750 SM00862 Transcriptional regulatory protein, C terminal CTU_27770 SM00046 Diacylglycerol kinase catalytic domain (presumed) CTU_27780 SM01133 CTU_27780 CTU_27850 SM00382 ATPases associated with a variety of cellular activities CTU_27880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_27880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_27890 SM00448 cheY-homologous receiver domain CTU_27890 SM00850 LytTr DNA-binding domain CTU_27900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_27950 SM00422 helix_turn_helix, mercury resistance CTU_27980 SM00382 ATPases associated with a variety of cellular activities CTU_28010 SM01217 CTU_28010 CTU_28090 SM00849 Metallo-beta-lactamase superfamily CTU_28120 SM00530 Helix-turn-helix XRE-family like proteins CTU_28190 SM00382 ATPases associated with a variety of cellular activities CTU_28210 SM00354 helix_turn _helix lactose operon repressor CTU_28290 SM00518 AP endonuclease family 2 CTU_28360 SM00841 Elongation factor P, C-terminal CTU_28360 SM01185 CTU_28360 CTU_28390 SM00833 Cobalamin synthesis protein cobW C-terminal domain CTU_28400 SM00014 Acid phosphatase homologues CTU_28420 SM00052 Putative diguanylate phosphodiesterase CTU_28460 SM00382 ATPases associated with a variety of cellular activities CTU_28500 SM00363 S4 RNA-binding domain CTU_28510 SM00487 DEAD-like helicases superfamily CTU_28510 SM00490 helicase superfamily c-terminal domain CTU_28570 SM00448 cheY-homologous receiver domain CTU_28570 SM00862 Transcriptional regulatory protein, C terminal CTU_28580 SM00387 Histidine kinase-like ATPases CTU_28580 SM00388 His Kinase A (phosphoacceptor) domain CTU_28610 SM01236 CTU_28610 CTU_28650 SM00849 Metallo-beta-lactamase superfamily CTU_28660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_28660 SM00382 ATPases associated with a variety of cellular activities CTU_28680 SM00382 ATPases associated with a variety of cellular activities CTU_28700 SM00342 helix_turn_helix, arabinose operon control protein CTU_28730 SM00387 Histidine kinase-like ATPases CTU_28740 SM00421 helix_turn_helix, Lux Regulon CTU_28740 SM00448 cheY-homologous receiver domain CTU_28750 SM00387 Histidine kinase-like ATPases CTU_28750 SM00388 His Kinase A (phosphoacceptor) domain CTU_28750 SM00448 cheY-homologous receiver domain CTU_28760 SM00434 DNA Topoisomerase IV CTU_28840 SM00852 Probable molybdopterin binding domain CTU_28860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_28860 SM00387 Histidine kinase-like ATPases CTU_28860 SM00388 His Kinase A (phosphoacceptor) domain CTU_28870 SM00448 cheY-homologous receiver domain CTU_28870 SM00862 Transcriptional regulatory protein, C terminal CTU_28930 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CTU_29000 SM00849 Metallo-beta-lactamase superfamily CTU_29080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTU_29080 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CTU_29090 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CTU_29170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTU_29250 SM00342 helix_turn_helix, arabinose operon control protein CTU_29330 SM00953 CTU_29330 CTU_29340 SM00382 ATPases associated with a variety of cellular activities CTU_29370 SM00062 Bacterial periplasmic substrate-binding proteins CTU_29380 SM00062 Bacterial periplasmic substrate-binding proteins CTU_29470 SM00859 Semialdehyde dehydrogenase, NAD binding domain CTU_29500 SM00869 Autotransporter beta-domain CTU_29510 SM00825 Beta-ketoacyl synthase CTU_29530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_29600 SM00463 Small MutS-related domain CTU_29750 SM00382 ATPases associated with a variety of cellular activities CTU_29940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_29940 SM00387 Histidine kinase-like ATPases CTU_29950 SM00448 cheY-homologous receiver domain CTU_29950 SM00850 LytTr DNA-binding domain CTU_30020 SM00052 Putative diguanylate phosphodiesterase CTU_30020 SM00267 diguanylate cyclase CTU_30080 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTU_30080 SM00292 breast cancer carboxy-terminal domain CTU_30080 SM00532 Ligase N family CTU_30090 SM00771 ZipA, C-terminal domain (FtsZ-binding) CTU_30180 SM00382 ATPases associated with a variety of cellular activities CTU_30280 SM00646 CTU_30280 CTU_30360 SM00382 ATPases associated with a variety of cellular activities CTU_30400 SM00530 Helix-turn-helix XRE-family like proteins CTU_30440 SM00822 CTU_30440 CTU_30520 SM00382 ATPases associated with a variety of cellular activities CTU_30530 SM00919 Malic enzyme, NAD binding domain CTU_30530 SM01274 CTU_30530 CTU_30550 SM00861 Transketolase, pyrimidine binding domain CTU_30620 SM00421 helix_turn_helix, Lux Regulon CTU_30620 SM00448 cheY-homologous receiver domain CTU_30730 SM01130 CTU_30730 CTU_30860 SM00052 Putative diguanylate phosphodiesterase CTU_30860 SM00267 diguanylate cyclase CTU_30920 SM00342 helix_turn_helix, arabinose operon control protein CTU_31000 SM00116 Domain in cystathionine beta-synthase and other proteins. CTU_31000 SM01240 CTU_31000 CTU_31060 SM00564 beta-propeller repeat CTU_31100 SM00530 Helix-turn-helix XRE-family like proteins CTU_31120 SM00562 CTU_31120 CTU_31140 SM01359 CTU_31140 CTU_31140 SM01360 CTU_31140 CTU_31180 SM00450 Rhodanese Homology Domain CTU_31270 SM00271 DnaJ molecular chaperone homology domain CTU_31390 SM00422 helix_turn_helix, mercury resistance CTU_31430 SM00938 Nitrogen regulatory protein P-II CTU_31440 SM00382 ATPases associated with a variety of cellular activities CTU_31440 SM00448 cheY-homologous receiver domain CTU_31460 SM00387 Histidine kinase-like ATPases CTU_31460 SM00388 His Kinase A (phosphoacceptor) domain CTU_31470 SM01211 CTU_31470 CTU_31580 SM00358 Double-stranded RNA binding motif CTU_31580 SM00535 Ribonuclease III family CTU_31670 SM00487 DEAD-like helicases superfamily CTU_31670 SM00490 helicase superfamily c-terminal domain CTU_31690 SM00986 Uracil DNA glycosylase superfamily CTU_31690 SM00987 UreE urease accessory protein, C-terminal domain CTU_31700 SM00967 RNA 2'-O ribose methyltransferase substrate binding CTU_31720 SM01144 CTU_31720 CTU_31730 SM00881 CoA binding domain CTU_31740 SM00155 Phospholipase D. Active site motifs. CTU_31790 SM00530 Helix-turn-helix XRE-family like proteins CTU_31810 SM00382 ATPases associated with a variety of cellular activities CTU_31810 SM01086 C-terminal, D2-small domain, of ClpB protein CTU_31830 SM00363 S4 RNA-binding domain CTU_31870 SM00830 Chorismate mutase type II CTU_31890 SM00830 Chorismate mutase type II CTU_31970 SM00382 ATPases associated with a variety of cellular activities CTU_31970 SM00962 SRP54-type protein, GTPase domain CTU_31970 SM00963 SRP54-type protein, helical bundle domain CTU_31990 SM01091 Transporter associated domain CTU_32080 SM00382 ATPases associated with a variety of cellular activities CTU_32670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_32670 SM00897 FIST N domain CTU_32670 SM01204 CTU_32670 CTU_32800 SM00382 ATPases associated with a variety of cellular activities CTU_32830 SM00347 helix_turn_helix multiple antibiotic resistance protein CTU_32860 SM00052 Putative diguanylate phosphodiesterase CTU_32860 SM00091 PAS domain CTU_32860 SM00267 diguanylate cyclase CTU_32920 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CTU_32940 SM00382 ATPases associated with a variety of cellular activities CTU_32970 SM00382 ATPases associated with a variety of cellular activities CTU_32990 SM00062 Bacterial periplasmic substrate-binding proteins CTU_32990 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CTU_33010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_33010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_33010 SM00319 Homologues of the ligand binding domain of Tar CTU_33050 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CTU_33050 SM00534 ATPase domain of DNA mismatch repair MUTS family CTU_33090 SM00347 helix_turn_helix multiple antibiotic resistance protein CTU_33140 SM00257 Lysin motif CTU_33400 SM01192 CTU_33400 CTU_33400 SM01193 CTU_33400 CTU_33430 SM00954 Region found in RelA / SpoT proteins CTU_33450 SM00073 Histidine Phosphotransfer domain CTU_33450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_33450 SM00387 Histidine kinase-like ATPases CTU_33450 SM00388 His Kinase A (phosphoacceptor) domain CTU_33450 SM00448 cheY-homologous receiver domain CTU_33560 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CTU_33560 SM00475 5'-3' exonuclease CTU_33640 SM00925 MltA specific insert domain CTU_33650 SM00646 CTU_33650 CTU_33680 SM00382 ATPases associated with a variety of cellular activities CTU_33780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTU_33810 SM00927 DNA mismatch repair enzyme MutH CTU_33860 SM00563 Phosphate acyltransferases CTU_33870 SM00354 helix_turn _helix lactose operon repressor CTU_33890 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_33890 SM00895 CTU_33890 CTU_33930 SM00354 helix_turn _helix lactose operon repressor CTU_34010 SM00382 ATPases associated with a variety of cellular activities CTU_34300 SM00530 Helix-turn-helix XRE-family like proteins CTU_34360 SM00257 Lysin motif CTU_34380 SM00937 CTU_34380 CTU_34480 SM01022 CTU_34480 CTU_34580 SM01011 Aminopeptidase P, N-terminal domain CTU_34700 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTU_34720 SM00861 Transketolase, pyrimidine binding domain CTU_34790 SM00731 SprT homologues. CTU_34840 SM00732 Likely ribonuclease with RNase H fold. CTU_34850 SM00346 helix_turn_helix isocitrate lyase regulation CTU_34870 SM00382 ATPases associated with a variety of cellular activities CTU_34900 SM01152 CTU_34900 CTU_34920 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_34940 SM00563 Phosphate acyltransferases CTU_34950 SM00434 DNA Topoisomerase IV CTU_35000 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CTU_35080 SM00387 Histidine kinase-like ATPases CTU_35080 SM00433 TopoisomeraseII CTU_35220 SM01118 CTU_35220 CTU_35240 SM00287 Bacterial SH3 domain homologues CTU_35250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTU_35270 SM00905 Dihydroneopterin aldolase CTU_35280 SM01207 CTU_35280 CTU_35310 SM00400 zinc finger CTU_35310 SM00493 CTU_35310 CTU_35310 SM00766 DNA primase DnaG DnaB-binding CTU_35350 SM00986 Uracil DNA glycosylase superfamily CTU_35350 SM00987 UreE urease accessory protein, C-terminal domain CTU_35450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_35450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_35510 SM00833 Cobalamin synthesis protein cobW C-terminal domain CTU_35580 SM00478 endonuclease III CTU_35580 SM00525 CTU_35580 CTU_35660 SM00764 Citrate lyase ligase C-terminal domain CTU_35690 SM00091 PAS domain CTU_35690 SM00387 Histidine kinase-like ATPases CTU_35700 SM00448 cheY-homologous receiver domain CTU_35810 SM00869 Autotransporter beta-domain CTU_35830 SM00354 helix_turn _helix lactose operon repressor CTU_35950 SM00420 helix_turn_helix, Deoxyribose operon repressor CTU_35950 SM01134 CTU_35950 CTU_36010 SM00342 helix_turn_helix, arabinose operon control protein CTU_36080 SM00354 helix_turn _helix lactose operon repressor CTU_36100 SM00642 Alpha-amylase domain CTU_36270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_36270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_36300 SM00382 ATPases associated with a variety of cellular activities CTU_36340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_36340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_36500 SM01091 Transporter associated domain CTU_36580 SM00342 helix_turn_helix, arabinose operon control protein CTU_36610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_36610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_36610 SM00319 Homologues of the ligand binding domain of Tar CTU_36740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTU_36740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_36790 SM00967 RNA 2'-O ribose methyltransferase substrate binding CTU_36800 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_36800 SM00357 Cold shock protein domain CTU_36800 SM00955 CTU_36800 CTU_36820 SM00788 Adenylosuccinate synthetase CTU_36840 SM00244 prohibitin homologues CTU_36850 SM00244 prohibitin homologues CTU_36900 SM00853 MutL C terminal dimerisation domain CTU_36900 SM01340 CTU_36900 CTU_36910 SM00646 CTU_36910 CTU_36960 SM00479 CTU_36960 CTU_37080 SM00421 helix_turn_helix, Lux Regulon CTU_37110 SM00841 Elongation factor P, C-terminal CTU_37110 SM01185 CTU_37110 CTU_37150 SM00883 Chaperonin 10 Kd subunit CTU_37450 SM00422 helix_turn_helix, mercury resistance CTU_37460 SM00342 helix_turn_helix, arabinose operon control protein CTU_37470 SM00052 Putative diguanylate phosphodiesterase CTU_37500 SM00267 diguanylate cyclase CTU_37560 SM00912 haemagglutination activity domain CTU_37620 SM01005 Alanine racemase, C-terminal domain CTU_37630 SM00382 ATPases associated with a variety of cellular activities CTU_37640 SM00829 Enoylreductase CTU_37740 SM00563 Phosphate acyltransferases CTU_37780 SM00382 ATPases associated with a variety of cellular activities CTU_37930 SM00244 prohibitin homologues CTU_37940 SM00382 ATPases associated with a variety of cellular activities CTU_37970 SM00530 Helix-turn-helix XRE-family like proteins CTU_38000 SM01018 B12 binding domain CTU_38010 SM00346 helix_turn_helix isocitrate lyase regulation CTU_38200 SM00422 helix_turn_helix, mercury resistance CTU_38230 SM00662 RNA polymerases D CTU_38240 SM00363 S4 RNA-binding domain CTU_38240 SM01390 CTU_38240 CTU_38360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CTU_38370 SM01374 CTU_38370 CTU_38410 SM00322 K homology RNA-binding domain CTU_38440 SM01382 CTU_38440 CTU_38440 SM01383 CTU_38440 CTU_38480 SM01403 CTU_38480 CTU_38540 SM00838 Elongation factor G C-terminus CTU_38540 SM00889 Elongation factor G, domain IV CTU_38670 SM00382 ATPases associated with a variety of cellular activities CTU_38750 SM00100 Cyclic nucleotide-monophosphate binding domain CTU_38750 SM00419 helix_turn_helix, cAMP Regulatory protein CTU_38910 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_38910 SM00866 CTU_38910 CTU_39000 SM00965 Secretin and TonB N terminus short domain CTU_39090 SM00363 S4 RNA-binding domain CTU_39130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_39130 SM00387 Histidine kinase-like ATPases CTU_39130 SM00388 His Kinase A (phosphoacceptor) domain CTU_39140 SM00448 cheY-homologous receiver domain CTU_39140 SM00862 Transcriptional regulatory protein, C terminal CTU_39160 SM00316 Ribosomal protein S1-like RNA-binding domain CTU_39160 SM00732 Likely ribonuclease with RNase H fold. CTU_39180 SM00899 CTU_39180 CTU_39250 SM00357 Cold shock protein domain CTU_39300 SM00421 helix_turn_helix, Lux Regulon CTU_39310 SM00420 helix_turn_helix, Deoxyribose operon repressor CTU_39310 SM01134 CTU_39310 CTU_39330 SM00450 Rhodanese Homology Domain CTU_39350 SM00267 diguanylate cyclase CTU_39400 SM00642 Alpha-amylase domain CTU_39410 SM00642 Alpha-amylase domain CTU_39420 SM00859 Semialdehyde dehydrogenase, NAD binding domain CTU_39480 SM00354 helix_turn _helix lactose operon repressor CTU_39550 SM00382 ATPases associated with a variety of cellular activities CTU_39590 SM00382 ATPases associated with a variety of cellular activities CTU_39600 SM00382 ATPases associated with a variety of cellular activities CTU_39690 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_39720 SM00382 ATPases associated with a variety of cellular activities CTU_39730 SM00382 ATPases associated with a variety of cellular activities CTU_39730 SM00962 SRP54-type protein, GTPase domain CTU_39730 SM00963 SRP54-type protein, helical bundle domain CTU_39900 SM00563 Phosphate acyltransferases CTU_40010 SM00825 Beta-ketoacyl synthase CTU_40040 SM00825 Beta-ketoacyl synthase CTU_40070 SM01230 CTU_40070 CTU_40260 SM00052 Putative diguanylate phosphodiesterase CTU_40300 SM00052 Putative diguanylate phosphodiesterase CTU_40300 SM00267 diguanylate cyclase CTU_40310 SM00028 Tetratricopeptide repeats CTU_40420 SM00382 ATPases associated with a variety of cellular activities CTU_40430 SM00382 ATPases associated with a variety of cellular activities CTU_40570 SM00354 helix_turn _helix lactose operon repressor CTU_40700 SM00342 helix_turn_helix, arabinose operon control protein CTU_40760 SM00382 ATPases associated with a variety of cellular activities CTU_40780 SM00342 helix_turn_helix, arabinose operon control protein CTU_40790 SM00047 Lysozyme subfamily 2 CTU_40800 SM00642 Alpha-amylase domain CTU_40910 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CTU_40920 SM01092 CO dehydrogenase flavoprotein C-terminal domain CTU_40950 SM00028 Tetratricopeptide repeats CTU_40980 SM00829 Enoylreductase CTU_41020 SM00387 Histidine kinase-like ATPases CTU_41020 SM00388 His Kinase A (phosphoacceptor) domain CTU_41030 SM00448 cheY-homologous receiver domain CTU_41030 SM00862 Transcriptional regulatory protein, C terminal CTU_41050 SM00095 Transthyretin CTU_41130 SM00448 cheY-homologous receiver domain CTU_41130 SM00862 Transcriptional regulatory protein, C terminal CTU_41140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTU_41140 SM00387 Histidine kinase-like ATPases CTU_41140 SM00388 His Kinase A (phosphoacceptor) domain CTU_41160 SM00971 Serine acetyltransferase, N-terminal CTU_41200 SM00450 Rhodanese Homology Domain CTU_41280 SM00829 Enoylreductase CTU_41400 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CTU_41400 SM01232 CTU_41400 CTU_41510 SM00532 Ligase N family CTU_41530 SM00072 Guanylate kinase homologues. CTU_41540 SM01409 CTU_41540 CTU_41550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTU_41550 SM00954 Region found in RelA / SpoT proteins CTU_41570 SM00487 DEAD-like helicases superfamily CTU_41570 SM00490 helicase superfamily c-terminal domain CTU_41720 SM00420 helix_turn_helix, Deoxyribose operon repressor CTU_41720 SM01134 CTU_41720 CTU_41750 SM01133 CTU_41750 CTU_41840 SM01230 CTU_41840 CTU_41850 SM00091 PAS domain CTU_41850 SM00387 Histidine kinase-like ATPases CTU_41850 SM00388 His Kinase A (phosphoacceptor) domain CTU_41860 SM00382 ATPases associated with a variety of cellular activities CTU_41860 SM00448 cheY-homologous receiver domain CTU_41880 SM00729 Elongator protein 3, MiaB family, Radical SAM CTU_41910 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CTU_41910 SM00474 3'-5' exonuclease CTU_41910 SM00475 5'-3' exonuclease CTU_41910 SM00482 DNA polymerase A domain CTU_41930 SM00563 Phosphate acyltransferases CTU_41990 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTU_41990 SM00895 CTU_41990 CTU_42010 SM00354 helix_turn _helix lactose operon repressor CTU_42050 SM00382 ATPases associated with a variety of cellular activities CTU_42090 SM00382 ATPases associated with a variety of cellular activities CTU_42100 SM00327 von Willebrand factor (vWF) type A domain CTU_42120 SM00344 helix_turn_helix ASNC type Ctu_1p00020 SM00855 Phosphoglycerate mutase family Ctu_1p00140 SM00530 Helix-turn-helix XRE-family like proteins Ctu_1p00290 SM00052 Putative diguanylate phosphodiesterase Ctu_1p00290 SM01034 Sensors of blue-light using FAD Ctu_1p00300 SM00422 helix_turn_helix, mercury resistance Ctu_1p00330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Ctu_1p00330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ctu_1p00330 SM01358 Ctu_1p00330 Ctu_1p00400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ctu_1p00430 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Ctu_1p00440 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ctu_1p00440 SM00866 Ctu_1p00440 Ctu_1p00450 SM00267 diguanylate cyclase Ctu_1p00510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ctu_1p00520 SM01130 Ctu_1p00520 Ctu_1p00540 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ctu_1p00600 SM00382 ATPases associated with a variety of cellular activities Ctu_1p00640 SM01061 CAT RNA binding domain Ctu_1p00720 SM00487 DEAD-like helicases superfamily Ctu_1p00800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Ctu_1p00810 SM00849 Metallo-beta-lactamase superfamily Ctu_1p00850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Ctu_1p00920 SM00831 Cation transporter/ATPase, N-terminus Ctu_1p00940 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. Ctu_1p00960 SM00869 Autotransporter beta-domain Ctu_1p00970 SM00642 Alpha-amylase domain Ctu_1p00980 SM00642 Alpha-amylase domain Ctu_1p00990 SM00642 Alpha-amylase domain Ctu_1p01010 SM00530 Helix-turn-helix XRE-family like proteins Ctu_1p01050 SM01006 Siderophore biosynthesis protein domain Ctu_1p01100 SM00470 ParB-like nuclease domain Ctu_1p01160 SM00912 haemagglutination activity domain Ctu_2p00050 SM00318 Staphylococcal nuclease homologues Ctu_2p00150 SM00530 Helix-turn-helix XRE-family like proteins Ctu_2p00160 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Ctu_3p00290 SM00966 SpoVT / AbrB like domain Ctu_3p00360 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ctu_3p00500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ctu_3p00500 SM00387 Histidine kinase-like ATPases Ctu_3p00500 SM00388 His Kinase A (phosphoacceptor) domain Ctu_3p00510 SM00448 cheY-homologous receiver domain Ctu_3p00510 SM00862 Transcriptional regulatory protein, C terminal Ctu_3p00600 SM00746 metallochaperone-like domain Ctu_3p00670 SM00448 cheY-homologous receiver domain Ctu_3p00670 SM00862 Transcriptional regulatory protein, C terminal Ctu_3p00690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ctu_3p00690 SM00387 Histidine kinase-like ATPases Ctu_3p00690 SM00388 His Kinase A (phosphoacceptor) domain