locus-tag class description GD606_00005 PF00308 Bacterial dnaA protein GD606_00005 PF08299 Bacterial dnaA protein helix-turn-helix GD606_00005 PF11638 DnaA N-terminal domain GD606_00010 PF03459 TOBE domain GD606_00015 PF00982 Glycosyltransferase family 20 GD606_00025 PF13419 Haloacid dehalogenase-like hydrolase GD606_00030 PF02666 Phosphatidylserine decarboxylase GD606_00035 PF01066 CDP-alcohol phosphatidyltransferase GD606_00040 PF08502 LeuA allosteric (dimerisation) domain GD606_00040 PF00682 HMGL-like GD606_00045 PF00330 Aconitase family (aconitate hydratase) GD606_00050 PF00694 Aconitase C-terminal domain GD606_00055 PF00180 Isocitrate/isopropylmalate dehydrogenase GD606_00070 PF01584 CheW-like domain GD606_00070 PF00072 Response regulator receiver domain GD606_00075 PF00669 Bacterial flagellin N-terminal helical region GD606_00075 PF00700 Bacterial flagellin C-terminal helical region GD606_00080 PF00035 Double-stranded RNA binding motif GD606_00080 PF14622 Ribonuclease-III-like GD606_00085 PF07085 DRTGG domain GD606_00105 PF08448 PAS fold GD606_00105 PF00563 EAL domain GD606_00105 PF00990 Diguanylate cyclase, GGDEF domain GD606_00105 PF08447 PAS fold GD606_00110 PF03707 Bacterial signalling protein N terminal repeat GD606_00110 PF00990 Diguanylate cyclase, GGDEF domain GD606_00110 PF00563 EAL domain GD606_00130 PF00107 Zinc-binding dehydrogenase GD606_00130 PF08240 Alcohol dehydrogenase GroES-like domain GD606_00145 PF00849 RNA pseudouridylate synthase GD606_00145 PF01479 S4 domain GD606_00165 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GD606_00165 PF00175 Oxidoreductase NAD-binding domain GD606_00190 PF00708 Acylphosphatase GD606_00190 PF17788 HypF Kae1-like domain GD606_00190 PF01300 Telomere recombination GD606_00190 PF07503 HypF finger GD606_00195 PF04015 Domain of unknown function (DUF362) GD606_00210 PF01479 S4 domain GD606_00210 PF00849 RNA pseudouridylate synthase GD606_00215 PF13458 Periplasmic binding protein GD606_00225 PF02653 Branched-chain amino acid transport system / permease component GD606_00240 PF09335 SNARE associated Golgi protein GD606_00245 PF01189 16S rRNA methyltransferase RsmB/F GD606_00245 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GD606_00245 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GD606_00250 PF00990 Diguanylate cyclase, GGDEF domain GD606_00250 PF00072 Response regulator receiver domain GD606_00255 PF01791 DeoC/LacD family aldolase GD606_00265 PF06574 FAD synthetase GD606_00265 PF01687 Riboflavin kinase GD606_00275 PF01435 Peptidase family M48 GD606_00280 PF00873 AcrB/AcrD/AcrF family GD606_00295 PF00216 Bacterial DNA-binding protein GD606_00325 PF01980 tRNA-methyltransferase O GD606_00335 PF00586 AIR synthase related protein, N-terminal domain GD606_00335 PF02769 AIR synthase related protein, C-terminal domain GD606_00340 PF01609 Transposase DDE domain GD606_00340 PF05598 Transposase domain (DUF772) GD606_00345 PF00512 His Kinase A (phospho-acceptor) domain GD606_00345 PF09308 LuxQ, periplasmic GD606_00345 PF00072 Response regulator receiver domain GD606_00345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_00350 PF00391 PEP-utilising enzyme, mobile domain GD606_00350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GD606_00350 PF02896 PEP-utilising enzyme, TIM barrel domain GD606_00365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GD606_00365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GD606_00370 PF03952 Enolase, N-terminal domain GD606_00370 PF00113 Enolase, C-terminal TIM barrel domain GD606_00385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GD606_00385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GD606_00385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GD606_00385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GD606_00390 PF00483 Nucleotidyl transferase GD606_00395 PF04851 Type III restriction enzyme, res subunit GD606_00395 PF18074 Primosomal protein N C-terminal domain GD606_00395 PF17764 3′ DNA-binding domain (3′BD) GD606_00395 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GD606_00395 PF00271 Helicase conserved C-terminal domain GD606_00415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GD606_00415 PF00005 ABC transporter GD606_00420 PF00528 Binding-protein-dependent transport system inner membrane component GD606_00420 PF12911 N-terminal TM domain of oligopeptide transport permease C GD606_00425 PF00528 Binding-protein-dependent transport system inner membrane component GD606_00430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GD606_00435 PF12833 Helix-turn-helix domain GD606_00440 PF01628 HrcA protein C terminal domain GD606_00445 PF01025 GrpE GD606_00450 PF00012 Hsp70 protein GD606_00465 PF05598 Transposase domain (DUF772) GD606_00465 PF01609 Transposase DDE domain GD606_00480 PF02686 Glu-tRNAGln amidotransferase C subunit GD606_00485 PF01425 Amidase GD606_00500 PF02082 Transcriptional regulator GD606_00510 PF00300 Histidine phosphatase superfamily (branch 1) GD606_00515 PF01964 Radical SAM ThiC family GD606_00520 PF00440 Bacterial regulatory proteins, tetR family GD606_00525 PF13533 Biotin-lipoyl like GD606_00530 PF00873 AcrB/AcrD/AcrF family GD606_00545 PF13458 Periplasmic binding protein GD606_00550 PF00005 ABC transporter GD606_00555 PF00528 Binding-protein-dependent transport system inner membrane component GD606_00560 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD606_00565 PF00155 Aminotransferase class I and II GD606_00570 PF07559 Flagellar basal body protein FlaE GD606_00570 PF00460 Flagella basal body rod protein GD606_00570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_00575 PF00158 Sigma-54 interaction domain GD606_00575 PF02954 Bacterial regulatory protein, Fis family GD606_00575 PF06490 Flagellar regulatory protein FleQ GD606_00590 PF01702 Queuine tRNA-ribosyltransferase GD606_00605 PF02774 Semialdehyde dehydrogenase, dimerisation domain GD606_00605 PF01118 Semialdehyde dehydrogenase, NAD binding domain GD606_00610 PF02219 Methylenetetrahydrofolate reductase GD606_00615 PF00293 NUDIX domain GD606_00625 PF00698 Acyl transferase domain GD606_00630 PF03485 Arginyl tRNA synthetase N terminal domain GD606_00630 PF00750 tRNA synthetases class I (R) GD606_00630 PF05746 DALR anticodon binding domain GD606_00640 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) GD606_00645 PF00633 Helix-hairpin-helix motif GD606_00645 PF00730 HhH-GPD superfamily base excision DNA repair protein GD606_00655 PF01206 Sulfurtransferase TusA GD606_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_00680 PF00512 His Kinase A (phospho-acceptor) domain GD606_00680 PF00989 PAS fold GD606_00685 PF00512 His Kinase A (phospho-acceptor) domain GD606_00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_00690 PF02954 Bacterial regulatory protein, Fis family GD606_00690 PF00072 Response regulator receiver domain GD606_00690 PF00158 Sigma-54 interaction domain GD606_00705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GD606_00710 PF00528 Binding-protein-dependent transport system inner membrane component GD606_00715 PF12911 N-terminal TM domain of oligopeptide transport permease C GD606_00715 PF00528 Binding-protein-dependent transport system inner membrane component GD606_00720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GD606_00720 PF00005 ABC transporter GD606_00725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GD606_00725 PF00005 ABC transporter GD606_00730 PF04951 D-aminopeptidase GD606_00735 PF02321 Outer membrane efflux protein GD606_00745 PF00005 ABC transporter GD606_00770 PF00072 Response regulator receiver domain GD606_00770 PF00196 Bacterial regulatory proteins, luxR family GD606_00780 PF00691 OmpA family GD606_00780 PF13677 Membrane MotB of proton-channel complex MotA/MotB GD606_00785 PF01618 MotA/TolQ/ExbB proton channel family GD606_00795 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GD606_00800 PF01180 Dihydroorotate dehydrogenase GD606_00805 PF02687 FtsX-like permease family GD606_00805 PF12704 MacB-like periplasmic core domain GD606_00815 PF02687 FtsX-like permease family GD606_00815 PF00005 ABC transporter GD606_00815 PF12704 MacB-like periplasmic core domain GD606_00820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_00825 PF00672 HAMP domain GD606_00825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_00825 PF13426 PAS domain GD606_00830 PF14815 NUDIX domain GD606_00830 PF00730 HhH-GPD superfamily base excision DNA repair protein GD606_00830 PF10576 Iron-sulfur binding domain of endonuclease III GD606_00830 PF00633 Helix-hairpin-helix motif GD606_00835 PF01434 Peptidase family M41 GD606_00835 PF00004 ATPase family associated with various cellular activities (AAA) GD606_00835 PF17862 AAA+ lid domain GD606_00860 PF03143 Elongation factor Tu C-terminal domain GD606_00860 PF00009 Elongation factor Tu GTP binding domain GD606_00860 PF03144 Elongation factor Tu domain 2 GD606_00865 PF00471 Ribosomal protein L33 GD606_00875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GD606_00880 PF00467 KOW motif GD606_00880 PF02357 Transcription termination factor nusG GD606_00885 PF03946 Ribosomal protein L11, N-terminal domain GD606_00885 PF00298 Ribosomal protein L11, RNA binding domain GD606_00890 PF00687 Ribosomal protein L1p/L10e family GD606_00895 PF00466 Ribosomal protein L10 GD606_00900 PF16320 Ribosomal protein L7/L12 dimerisation domain GD606_00900 PF00542 Ribosomal protein L7/L12 C-terminal domain GD606_00905 PF04565 RNA polymerase Rpb2, domain 3 GD606_00905 PF00562 RNA polymerase Rpb2, domain 6 GD606_00905 PF04561 RNA polymerase Rpb2, domain 2 GD606_00905 PF04563 RNA polymerase beta subunit GD606_00905 PF04560 RNA polymerase Rpb2, domain 7 GD606_00905 PF10385 RNA polymerase beta subunit external 1 domain GD606_00910 PF00623 RNA polymerase Rpb1, domain 2 GD606_00910 PF04998 RNA polymerase Rpb1, domain 5 GD606_00910 PF05000 RNA polymerase Rpb1, domain 4 GD606_00910 PF04983 RNA polymerase Rpb1, domain 3 GD606_00910 PF04997 RNA polymerase Rpb1, domain 1 GD606_00915 PF01545 Cation efflux family GD606_00915 PF16916 Dimerisation domain of Zinc Transporter GD606_00920 PF04055 Radical SAM superfamily GD606_00920 PF06969 HemN C-terminal domain GD606_00935 PF01551 Peptidase family M23 GD606_00945 PF00301 Rubredoxin GD606_00950 PF00768 D-alanyl-D-alanine carboxypeptidase GD606_00950 PF07943 Penicillin-binding protein 5, C-terminal domain GD606_00965 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) GD606_00975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_00975 PF00672 HAMP domain GD606_00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_00975 PF00512 His Kinase A (phospho-acceptor) domain GD606_00975 PF01627 Hpt domain GD606_00975 PF00072 Response regulator receiver domain GD606_00985 PF01627 Hpt domain GD606_00985 PF00072 Response regulator receiver domain GD606_00985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_00985 PF00512 His Kinase A (phospho-acceptor) domain GD606_00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_00985 PF00672 HAMP domain GD606_00995 PF00291 Pyridoxal-phosphate dependent enzyme GD606_01020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GD606_01025 PF05973 Phage derived protein Gp49-like (DUF891) GD606_01035 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component GD606_01045 PF01476 LysM domain GD606_01045 PF05257 CHAP domain GD606_01050 PF00588 SpoU rRNA Methylase family GD606_01050 PF08032 RNA 2'-O ribose methyltransferase substrate binding GD606_01060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GD606_01060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GD606_01065 PF00764 Arginosuccinate synthase GD606_01070 PF14698 Argininosuccinate lyase C-terminal GD606_01070 PF00206 Lyase GD606_01075 PF01590 GAF domain GD606_01075 PF02954 Bacterial regulatory protein, Fis family GD606_01075 PF00158 Sigma-54 interaction domain GD606_01100 PF00561 alpha/beta hydrolase fold GD606_01105 PF00005 ABC transporter GD606_01105 PF12848 ABC transporter GD606_01110 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain GD606_01110 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 GD606_01115 PF13247 4Fe-4S dicluster domain GD606_01120 PF00342 Phosphoglucose isomerase GD606_01125 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GD606_01145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_01145 PF13426 PAS domain GD606_01145 PF00672 HAMP domain GD606_01150 PF01915 Glycosyl hydrolase family 3 C-terminal domain GD606_01150 PF00933 Glycosyl hydrolase family 3 N terminal domain GD606_01155 PF00390 Malic enzyme, N-terminal domain GD606_01155 PF01515 Phosphate acetyl/butaryl transferase GD606_01155 PF03949 Malic enzyme, NAD binding domain GD606_01160 PF03707 Bacterial signalling protein N terminal repeat GD606_01160 PF00990 Diguanylate cyclase, GGDEF domain GD606_01160 PF00563 EAL domain GD606_01200 PF01790 Prolipoprotein diacylglyceryl transferase GD606_01210 PF02548 Ketopantoate hydroxymethyltransferase GD606_01215 PF12105 SpoU, rRNA methylase, C-terminal GD606_01215 PF00588 SpoU rRNA Methylase family GD606_01220 PF07690 Major Facilitator Superfamily GD606_01230 PF02913 FAD linked oxidases, C-terminal domain GD606_01230 PF01565 FAD binding domain GD606_01240 PF00005 ABC transporter GD606_01245 PF00528 Binding-protein-dependent transport system inner membrane component GD606_01250 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD606_01255 PF00486 Transcriptional regulatory protein, C terminal GD606_01255 PF00072 Response regulator receiver domain GD606_01275 PF01339 CheB methylesterase GD606_01275 PF00072 Response regulator receiver domain GD606_01285 PF00205 Thiamine pyrophosphate enzyme, central domain GD606_01285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD606_01285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD606_01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_01315 PF00512 His Kinase A (phospho-acceptor) domain GD606_01315 PF00989 PAS fold GD606_01320 PF00465 Iron-containing alcohol dehydrogenase GD606_01325 PF04794 YdjC-like protein GD606_01335 PF00682 HMGL-like GD606_01335 PF08502 LeuA allosteric (dimerisation) domain GD606_01345 PF03641 Possible lysine decarboxylase GD606_01355 PF17757 UvrB interaction domain GD606_01355 PF12344 Ultra-violet resistance protein B GD606_01355 PF00271 Helicase conserved C-terminal domain GD606_01355 PF04851 Type III restriction enzyme, res subunit GD606_01355 PF02151 UvrB/uvrC motif GD606_01360 PF00999 Sodium/hydrogen exchanger family GD606_01360 PF02254 TrkA-N domain GD606_01370 PF00533 BRCA1 C Terminus (BRCT) domain GD606_01370 PF03120 NAD-dependent DNA ligase OB-fold domain GD606_01370 PF12826 Helix-hairpin-helix motif GD606_01370 PF01653 NAD-dependent DNA ligase adenylation domain GD606_01370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GD606_01375 PF05173 Dihydrodipicolinate reductase, C-terminus GD606_01375 PF01113 Dihydrodipicolinate reductase, N-terminus GD606_01380 PF00672 HAMP domain GD606_01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_01380 PF00512 His Kinase A (phospho-acceptor) domain GD606_01380 PF01627 Hpt domain GD606_01380 PF00072 Response regulator receiver domain GD606_01380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_01385 PF01139 tRNA-splicing ligase RtcB GD606_01400 PF00501 AMP-binding enzyme GD606_01400 PF14535 AMP-binding enzyme C-terminal domain GD606_01410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GD606_01410 PF01676 Metalloenzyme superfamily GD606_01420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GD606_01420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GD606_01420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GD606_01420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GD606_01440 PF13247 4Fe-4S dicluster domain GD606_01455 PF00989 PAS fold GD606_01455 PF00512 His Kinase A (phospho-acceptor) domain GD606_01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_01460 PF00158 Sigma-54 interaction domain GD606_01460 PF02954 Bacterial regulatory protein, Fis family GD606_01460 PF00072 Response regulator receiver domain GD606_01485 PF00578 AhpC/TSA family GD606_01510 PF01757 Acyltransferase family GD606_01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_01515 PF00072 Response regulator receiver domain GD606_01520 PF00005 ABC transporter GD606_01525 PF01458 Uncharacterized protein family (UPF0051) GD606_01535 PF01556 DnaJ C terminal domain GD606_01535 PF00226 DnaJ domain GD606_01535 PF00684 DnaJ central domain GD606_01550 PF04055 Radical SAM superfamily GD606_01555 PF00892 EamA-like transporter family GD606_01575 PF01624 MutS domain I GD606_01575 PF05188 MutS domain II GD606_01575 PF05192 MutS domain III GD606_01575 PF05190 MutS family domain IV GD606_01575 PF00488 MutS domain V GD606_01580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GD606_01580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GD606_01600 PF03190 Protein of unknown function, DUF255 GD606_01605 PF00155 Aminotransferase class I and II GD606_01625 PF03033 Glycosyltransferase family 28 N-terminal domain GD606_01625 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GD606_01625 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GD606_01625 PF03033 Glycosyltransferase family 28 N-terminal domain GD606_01635 PF01300 Telomere recombination GD606_01655 PF00293 NUDIX domain GD606_01660 PF00534 Glycosyl transferases group 1 GD606_01660 PF08323 Starch synthase catalytic domain GD606_01665 PF00128 Alpha amylase, catalytic domain GD606_01665 PF02806 Alpha amylase, C-terminal all-beta domain GD606_01665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GD606_01670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GD606_01685 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GD606_01685 PF02542 YgbB family GD606_01700 PF01784 NIF3 (NGG1p interacting factor 3) GD606_01710 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_01725 PF01297 Zinc-uptake complex component A periplasmic GD606_01730 PF00005 ABC transporter GD606_01735 PF00950 ABC 3 transport family GD606_01745 PF16363 GDP-mannose 4,6 dehydratase GD606_01770 PF00313 'Cold-shock' DNA-binding domain GD606_01780 PF00291 Pyridoxal-phosphate dependent enzyme GD606_01785 PF02130 Uncharacterized protein family UPF0054 GD606_01790 PF07698 7TM receptor with intracellular HD hydrolase GD606_01790 PF07697 7TM-HD extracellular GD606_01790 PF01966 HD domain GD606_01795 PF02562 PhoH-like protein GD606_01805 PF01258 Prokaryotic dksA/traR C4-type zinc finger GD606_01835 PF04358 DsrC like protein GD606_01850 PF00535 Glycosyl transferase family 2 GD606_01860 PF01791 DeoC/LacD family aldolase GD606_01870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GD606_01880 PF01022 Bacterial regulatory protein, arsR family GD606_01895 PF01451 Low molecular weight phosphotyrosine protein phosphatase GD606_01910 PF01451 Low molecular weight phosphotyrosine protein phosphatase GD606_01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_01915 PF05384 Sensor protein DegS GD606_01915 PF07730 Histidine kinase GD606_01920 PF00196 Bacterial regulatory proteins, luxR family GD606_01920 PF00072 Response regulator receiver domain GD606_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_01945 PF00512 His Kinase A (phospho-acceptor) domain GD606_01950 PF00158 Sigma-54 interaction domain GD606_01950 PF00072 Response regulator receiver domain GD606_01950 PF02954 Bacterial regulatory protein, Fis family GD606_01955 PF17910 FeoB cytosolic helical domain GD606_01955 PF04023 FeoA domain GD606_01955 PF07670 Nucleoside recognition GD606_01955 PF02421 Ferrous iron transport protein B GD606_01955 PF07664 Ferrous iron transport protein B C terminus GD606_01965 PF07670 Nucleoside recognition GD606_01965 PF02421 Ferrous iron transport protein B GD606_01965 PF17910 FeoB cytosolic helical domain GD606_01965 PF07664 Ferrous iron transport protein B C terminus GD606_01965 PF04023 FeoA domain GD606_01975 PF00990 Diguanylate cyclase, GGDEF domain GD606_01980 PF00072 Response regulator receiver domain GD606_02010 PF01773 Na+ dependent nucleoside transporter N-terminus GD606_02010 PF07670 Nucleoside recognition GD606_02010 PF07662 Na+ dependent nucleoside transporter C-terminus GD606_02035 PF02629 CoA binding domain GD606_02035 PF00549 CoA-ligase GD606_02045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD606_02050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GD606_02050 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GD606_02050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GD606_02065 PF01381 Helix-turn-helix GD606_02070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GD606_02080 PF00857 Isochorismatase family GD606_02105 PF10609 NUBPL iron-transfer P-loop NTPase GD606_02110 PF01066 CDP-alcohol phosphatidyltransferase GD606_02135 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GD606_02140 PF00814 Glycoprotease family GD606_02145 PF00085 Thioredoxin GD606_02150 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_02155 PF13525 Outer membrane lipoprotein GD606_02165 PF00009 Elongation factor Tu GTP binding domain GD606_02165 PF00679 Elongation factor G C-terminus GD606_02165 PF14492 Elongation Factor G, domain II GD606_02165 PF03144 Elongation factor Tu domain 2 GD606_02165 PF03764 Elongation factor G, domain IV GD606_02170 PF01757 Acyltransferase family GD606_02180 PF01467 Cytidylyltransferase-like GD606_02200 PF01066 CDP-alcohol phosphatidyltransferase GD606_02205 PF02416 mttA/Hcf106 family GD606_02225 PF02325 YGGT family GD606_02235 PF02594 Uncharacterised ACR, YggU family COG1872 GD606_02245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD606_02245 PF00205 Thiamine pyrophosphate enzyme, central domain GD606_02245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD606_02250 PF01842 ACT domain GD606_02250 PF10369 Small subunit of acetolactate synthase GD606_02255 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GD606_02255 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GD606_02270 PF04193 PQ loop repeat GD606_02285 PF02441 Flavoprotein GD606_02290 PF01406 tRNA synthetases class I (C) catalytic domain GD606_02290 PF09190 DALR domain GD606_02295 PF00474 Sodium:solute symporter family GD606_02300 PF00501 AMP-binding enzyme GD606_02300 PF13193 AMP-binding enzyme C-terminal domain GD606_02315 PF13193 AMP-binding enzyme C-terminal domain GD606_02315 PF00501 AMP-binding enzyme GD606_02320 PF02954 Bacterial regulatory protein, Fis family GD606_02320 PF00072 Response regulator receiver domain GD606_02320 PF00158 Sigma-54 interaction domain GD606_02325 PF01206 Sulfurtransferase TusA GD606_02325 PF00581 Rhodanese-like domain GD606_02335 PF01593 Flavin containing amine oxidoreductase GD606_02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_02340 PF04324 BFD-like [2Fe-2S] binding domain GD606_02370 PF02527 rRNA small subunit methyltransferase G GD606_02380 PF02590 Predicted SPOUT methyltransferase GD606_02390 PF01370 NAD dependent epimerase/dehydratase family GD606_02390 PF08338 Domain of unknown function (DUF1731) GD606_02400 PF01812 5-formyltetrahydrofolate cyclo-ligase family GD606_02410 PF00072 Response regulator receiver domain GD606_02415 PF03372 Endonuclease/Exonuclease/phosphatase family GD606_02430 PF00484 Carbonic anhydrase GD606_02435 PF03600 Citrate transporter GD606_02445 PF00890 FAD binding domain GD606_02445 PF02910 Fumarate reductase flavoprotein C-term GD606_02450 PF13085 2Fe-2S iron-sulfur cluster binding domain GD606_02450 PF13183 4Fe-4S dicluster domain GD606_02455 PF05681 Fumarate hydratase (Fumerase) GD606_02770 PF00565 Staphylococcal nuclease homologue GD606_02830 PF00589 Phage integrase family GD606_02830 PF02899 Phage integrase, N-terminal SAM-like domain GD606_02850 PF02954 Bacterial regulatory protein, Fis family GD606_02850 PF00072 Response regulator receiver domain GD606_02850 PF00158 Sigma-54 interaction domain GD606_02865 PF00072 Response regulator receiver domain GD606_02865 PF02954 Bacterial regulatory protein, Fis family GD606_02865 PF00158 Sigma-54 interaction domain GD606_02875 PF13188 PAS domain GD606_02875 PF08448 PAS fold GD606_02875 PF00072 Response regulator receiver domain GD606_02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_02875 PF00512 His Kinase A (phospho-acceptor) domain GD606_02880 PF00072 Response regulator receiver domain GD606_02880 PF00486 Transcriptional regulatory protein, C terminal GD606_02890 PF00158 Sigma-54 interaction domain GD606_02890 PF00072 Response regulator receiver domain GD606_02890 PF02954 Bacterial regulatory protein, Fis family GD606_02895 PF13188 PAS domain GD606_02895 PF08448 PAS fold GD606_02895 PF00512 His Kinase A (phospho-acceptor) domain GD606_02895 PF00072 Response regulator receiver domain GD606_02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_02925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GD606_02940 PF00589 Phage integrase family GD606_02950 PF18389 TrmO C-terminal domain GD606_02950 PF01980 tRNA-methyltransferase O GD606_02965 PF00528 Binding-protein-dependent transport system inner membrane component GD606_02975 PF12794 Mechanosensitive ion channel inner membrane domain 1 GD606_02975 PF12795 Mechanosensitive ion channel porin domain GD606_02975 PF00924 Mechanosensitive ion channel GD606_02980 PF00027 Cyclic nucleotide-binding domain GD606_02980 PF07885 Ion channel GD606_02985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_02990 PF00873 AcrB/AcrD/AcrF family GD606_02995 PF02423 Ornithine cyclodeaminase/mu-crystallin family GD606_03000 PF07690 Major Facilitator Superfamily GD606_03010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_03010 PF00672 HAMP domain GD606_03010 PF02743 Cache domain GD606_03020 PF00005 ABC transporter GD606_03020 PF08402 TOBE domain GD606_03025 PF00528 Binding-protein-dependent transport system inner membrane component GD606_03030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_03030 PF16591 Helical bimodular sensor domain GD606_03030 PF00672 HAMP domain GD606_03040 PF12849 PBP superfamily domain GD606_03045 PF02256 Iron hydrogenase small subunit GD606_03050 PF02906 Iron only hydrogenase large subunit, C-terminal domain GD606_03050 PF00037 4Fe-4S binding domain GD606_03055 PF01926 50S ribosome-binding GTPase GD606_03055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GD606_03060 PF04055 Radical SAM superfamily GD606_03060 PF06968 Biotin and Thiamin Synthesis associated domain GD606_03065 PF10415 Fumarase C C-terminus GD606_03065 PF00206 Lyase GD606_03070 PF04055 Radical SAM superfamily GD606_03070 PF06968 Biotin and Thiamin Synthesis associated domain GD606_03095 PF01168 Alanine racemase, N-terminal domain GD606_03095 PF00842 Alanine racemase, C-terminal domain GD606_03100 PF00294 pfkB family carbohydrate kinase GD606_03100 PF01467 Cytidylyltransferase-like GD606_03115 PF01740 STAS domain GD606_03125 PF00350 Dynamin family GD606_03130 PF03466 LysR substrate binding domain GD606_03130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD606_03140 PF00486 Transcriptional regulatory protein, C terminal GD606_03140 PF00072 Response regulator receiver domain GD606_03150 PF01250 Ribosomal protein S6 GD606_03155 PF01084 Ribosomal protein S18 GD606_03160 PF03948 Ribosomal protein L9, C-terminal domain GD606_03160 PF01281 Ribosomal protein L9, N-terminal domain GD606_03170 PF14535 AMP-binding enzyme C-terminal domain GD606_03170 PF00501 AMP-binding enzyme GD606_03180 PF00291 Pyridoxal-phosphate dependent enzyme GD606_03185 PF01479 S4 domain GD606_03185 PF01728 FtsJ-like methyltransferase GD606_03210 PF02634 FdhD/NarQ family GD606_03215 PF01967 MoaC family GD606_03215 PF12804 MobA-like NTP transferase domain GD606_03220 PF06463 Molybdenum Cofactor Synthesis C GD606_03220 PF04055 Radical SAM superfamily GD606_03235 PF01295 Adenylate cyclase, class-I GD606_03235 PF12633 Adenylate cyclase NT domain GD606_03240 PF00072 Response regulator receiver domain GD606_03250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GD606_03250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GD606_03265 PF00890 FAD binding domain GD606_03270 PF04324 BFD-like [2Fe-2S] binding domain GD606_03270 PF01266 FAD dependent oxidoreductase GD606_03275 PF08220 DeoR-like helix-turn-helix domain GD606_03275 PF00455 DeoR C terminal sensor domain GD606_03280 PF00005 ABC transporter GD606_03280 PF08402 TOBE domain GD606_03285 PF08402 TOBE domain GD606_03285 PF00005 ABC transporter GD606_03290 PF00528 Binding-protein-dependent transport system inner membrane component GD606_03295 PF00528 Binding-protein-dependent transport system inner membrane component GD606_03310 PF03313 Serine dehydratase alpha chain GD606_03325 PF00005 ABC transporter GD606_03335 PF00072 Response regulator receiver domain GD606_03335 PF01584 CheW-like domain GD606_03340 PF17243 POTRA domain TamA domain 1 GD606_03340 PF01103 Surface antigen GD606_03340 PF07244 Surface antigen variable number repeat GD606_03365 PF14437 MafB19-like deaminase GD606_03375 PF00117 Glutamine amidotransferase class-I GD606_03375 PF06418 CTP synthase N-terminus GD606_03385 PF00309 Sigma-54 factor, Activator interacting domain (AID) GD606_03385 PF04963 Sigma-54 factor, core binding domain GD606_03385 PF04552 Sigma-54, DNA binding domain GD606_03390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GD606_03390 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GD606_03395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GD606_03400 PF03668 P-loop ATPase protein family GD606_03405 PF03610 PTS system fructose IIA component GD606_03405 PF03830 PTS system sorbose subfamily IIB component GD606_03410 PF03830 PTS system sorbose subfamily IIB component GD606_03420 PF01368 DHH family GD606_03420 PF02833 DHHA2 domain GD606_03430 PF13382 Adenine deaminase C-terminal domain GD606_03430 PF01979 Amidohydrolase family GD606_03440 PF01479 S4 domain GD606_03440 PF00849 RNA pseudouridylate synthase GD606_03450 PF01580 FtsK/SpoIIIE family GD606_03450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GD606_03450 PF17854 FtsK alpha domain GD606_03450 PF09397 Ftsk gamma domain GD606_03455 PF01132 Elongation factor P (EF-P) OB domain GD606_03455 PF08207 Elongation factor P (EF-P) KOW-like domain GD606_03455 PF09285 Elongation factor P, C-terminal GD606_03460 PF01220 Dehydroquinase class II GD606_03465 PF01926 50S ribosome-binding GTPase GD606_03475 PF02673 Bacitracin resistance protein BacA GD606_03480 PF01119 DNA mismatch repair protein, C-terminal domain GD606_03480 PF08676 MutL C terminal dimerisation domain GD606_03485 PF01370 NAD dependent epimerase/dehydratase family GD606_03490 PF00117 Glutamine amidotransferase class-I GD606_03495 PF00977 Histidine biosynthesis protein GD606_03500 PF01967 MoaC family GD606_03510 PF00226 DnaJ domain GD606_03510 PF01556 DnaJ C terminal domain GD606_03510 PF00684 DnaJ central domain GD606_03515 PF01192 RNA polymerase Rpb6 GD606_03520 PF07694 5TMR of 5TMR-LYT GD606_03520 PF06580 Histidine kinase GD606_03540 PF00005 ABC transporter GD606_03545 PF12704 MacB-like periplasmic core domain GD606_03545 PF02687 FtsX-like permease family GD606_03550 PF00158 Sigma-54 interaction domain GD606_03550 PF00072 Response regulator receiver domain GD606_03550 PF02954 Bacterial regulatory protein, Fis family GD606_03560 PF00672 HAMP domain GD606_03560 PF13426 PAS domain GD606_03560 PF00512 His Kinase A (phospho-acceptor) domain GD606_03560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_03575 PF01594 AI-2E family transporter GD606_03580 PF00005 ABC transporter GD606_03585 PF02361 Cobalt transport protein GD606_03585 PF00005 ABC transporter GD606_03595 PF01891 Cobalt uptake substrate-specific transmembrane region GD606_03605 PF07549 SecD/SecF GG Motif GD606_03605 PF02355 Protein export membrane protein GD606_03610 PF02699 Preprotein translocase subunit GD606_03615 PF04545 Sigma-70, region 4 GD606_03615 PF04539 Sigma-70 region 3 GD606_03615 PF03979 Sigma-70 factor, region 1.1 GD606_03615 PF04542 Sigma-70 region 2 GD606_03615 PF00140 Sigma-70 factor, region 1.2 GD606_03615 PF04546 Sigma-70, non-essential region GD606_03620 PF08278 DNA primase DnaG DnaB-binding GD606_03620 PF10410 DnaB-helicase binding domain of primase GD606_03620 PF08275 DNA primase catalytic core, N-terminal domain GD606_03620 PF01807 CHC2 zinc finger GD606_03620 PF13662 Toprim domain GD606_03625 PF01713 Smr domain GD606_03625 PF00488 MutS domain V GD606_03630 PF09424 Yqey-like protein GD606_03635 PF01165 Ribosomal protein S21 GD606_03645 PF00216 Bacterial DNA-binding protein GD606_03650 PF00398 Ribosomal RNA adenine dimethylase GD606_03655 PF00534 Glycosyl transferases group 1 GD606_03655 PF13439 Glycosyltransferase Family 4 GD606_03660 PF17151 Periplasmic sensor domain GD606_03660 PF00990 Diguanylate cyclase, GGDEF domain GD606_03680 PF00391 PEP-utilising enzyme, mobile domain GD606_03680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GD606_03680 PF02896 PEP-utilising enzyme, TIM barrel domain GD606_03685 PF02785 Biotin carboxylase C-terminal domain GD606_03685 PF02436 Conserved carboxylase domain GD606_03685 PF00364 Biotin-requiring enzyme GD606_03685 PF00289 Biotin carboxylase, N-terminal domain GD606_03685 PF00682 HMGL-like GD606_03685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD606_03695 PF12627 Probable RNA and SrmB- binding site of polymerase A GD606_03695 PF01966 HD domain GD606_03695 PF01743 Poly A polymerase head domain GD606_03700 PF07559 Flagellar basal body protein FlaE GD606_03700 PF00460 Flagella basal body rod protein GD606_03700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_03715 PF10414 Sirohaem synthase dimerisation region GD606_03715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_03715 PF14824 Sirohaem biosynthesis protein central GD606_03720 PF01578 Cytochrome C assembly protein GD606_03725 PF01488 Shikimate / quinate 5-dehydrogenase GD606_03725 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GD606_03725 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GD606_03740 PF00459 Inositol monophosphatase family GD606_03760 PF01571 Aminomethyltransferase folate-binding domain GD606_03760 PF08669 Glycine cleavage T-protein C-terminal barrel domain GD606_03765 PF04452 RNA methyltransferase GD606_03770 PF12002 MgsA AAA+ ATPase C terminal GD606_03770 PF16193 AAA C-terminal domain GD606_03770 PF00004 ATPase family associated with various cellular activities (AAA) GD606_03775 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GD606_03775 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GD606_03780 PF02445 Quinolinate synthetase A protein GD606_03785 PF02910 Fumarate reductase flavoprotein C-term GD606_03785 PF00890 FAD binding domain GD606_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_03810 PF00512 His Kinase A (phospho-acceptor) domain GD606_03810 PF08448 PAS fold GD606_03810 PF00072 Response regulator receiver domain GD606_03810 PF13426 PAS domain GD606_03815 PF00072 Response regulator receiver domain GD606_03815 PF09308 LuxQ, periplasmic GD606_03815 PF00512 His Kinase A (phospho-acceptor) domain GD606_03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_03835 PF01253 Translation initiation factor SUI1 GD606_03875 PF00873 AcrB/AcrD/AcrF family GD606_03880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_03880 PF00529 HlyD membrane-fusion protein of T1SS GD606_03885 PF00440 Bacterial regulatory proteins, tetR family GD606_03900 PF13276 HTH-like domain GD606_03900 PF13683 Integrase core domain GD606_03950 PF00216 Bacterial DNA-binding protein GD606_04100 PF07030 Protein of unknown function (DUF1320) GD606_04105 PF05069 Phage virion morphogenesis family GD606_04220 PF01555 DNA methylase GD606_04230 PF00145 C-5 cytosine-specific DNA methylase GD606_04240 PF00072 Response regulator receiver domain GD606_04245 PF00905 Penicillin binding protein transpeptidase domain GD606_04245 PF00912 Transglycosylase GD606_04245 PF06832 Penicillin-Binding Protein C-terminus Family GD606_04265 PF00528 Binding-protein-dependent transport system inner membrane component GD606_04275 PF00005 ABC transporter GD606_04275 PF08402 TOBE domain GD606_04280 PF00535 Glycosyl transferase family 2 GD606_04290 PF00158 Sigma-54 interaction domain GD606_04290 PF00072 Response regulator receiver domain GD606_04290 PF02954 Bacterial regulatory protein, Fis family GD606_04295 PF03129 Anticodon binding domain GD606_04295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GD606_04295 PF04073 Aminoacyl-tRNA editing domain GD606_04300 PF04551 GcpE protein GD606_04325 PF02677 Epoxyqueuosine reductase QueH GD606_04330 PF12111 Polyribonucleotide phosphorylase C terminal GD606_04330 PF00575 S1 RNA binding domain GD606_04330 PF10150 Ribonuclease E/G family GD606_04335 PF04055 Radical SAM superfamily GD606_04340 PF08704 tRNA methyltransferase complex GCD14 subunit GD606_04345 PF18415 Histidine kinase receptor ArcB trans-membrane domain GD606_04345 PF01627 Hpt domain GD606_04345 PF00072 Response regulator receiver domain GD606_04345 PF00512 His Kinase A (phospho-acceptor) domain GD606_04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_04345 PF00989 PAS fold GD606_04350 PF00501 AMP-binding enzyme GD606_04350 PF14535 AMP-binding enzyme C-terminal domain GD606_04355 PF17820 PDZ domain GD606_04355 PF02163 Peptidase family M50 GD606_04360 PF06827 Zinc finger found in FPG and IleRS GD606_04360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GD606_04360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GD606_04365 PF03023 Lipid II flippase MurJ GD606_04370 PF03741 Integral membrane protein TerC family GD606_04375 PF13649 Methyltransferase domain GD606_04380 PF00916 Sulfate permease family GD606_04380 PF01740 STAS domain GD606_04385 PF12706 Beta-lactamase superfamily domain GD606_04385 PF00753 Metallo-beta-lactamase superfamily GD606_04395 PF01871 AMMECR1 GD606_04400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_04400 PF00672 HAMP domain GD606_04400 PF12729 Four helix bundle sensory module for signal transduction GD606_04405 PF12729 Four helix bundle sensory module for signal transduction GD606_04405 PF00672 HAMP domain GD606_04405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_04415 PF03061 Thioesterase superfamily GD606_04420 PF01676 Metalloenzyme superfamily GD606_04420 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GD606_04425 PF01842 ACT domain GD606_04425 PF00742 Homoserine dehydrogenase GD606_04425 PF03447 Homoserine dehydrogenase, NAD binding domain GD606_04430 PF00155 Aminotransferase class I and II GD606_04445 PF02608 ABC transporter substrate-binding protein PnrA-like GD606_04450 PF07690 Major Facilitator Superfamily GD606_04460 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GD606_04460 PF01799 [2Fe-2S] binding domain GD606_04460 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GD606_04460 PF00111 2Fe-2S iron-sulfur cluster binding domain GD606_04465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GD606_04465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GD606_04465 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_04485 PF04055 Radical SAM superfamily GD606_04485 PF06463 Molybdenum Cofactor Synthesis C GD606_04495 PF02625 XdhC and CoxI family GD606_04495 PF13478 XdhC Rossmann domain GD606_04510 PF05384 Sensor protein DegS GD606_04510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_04510 PF07730 Histidine kinase GD606_04515 PF00072 Response regulator receiver domain GD606_04515 PF00196 Bacterial regulatory proteins, luxR family GD606_04540 PF01043 SecA preprotein cross-linking domain GD606_04540 PF07517 SecA DEAD-like domain GD606_04540 PF07516 SecA Wing and Scaffold domain GD606_04540 PF02810 SEC-C motif GD606_04560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD606_04565 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GD606_04565 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GD606_04565 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GD606_04575 PF00210 Ferritin-like domain GD606_04580 PF06397 Desulfoferrodoxin, N-terminal domain GD606_04580 PF01880 Desulfoferrodoxin GD606_04600 PF02190 ATP-dependent protease La (LON) substrate-binding domain GD606_04600 PF05362 Lon protease (S16) C-terminal proteolytic domain GD606_04600 PF00004 ATPase family associated with various cellular activities (AAA) GD606_04605 PF07724 AAA domain (Cdc48 subfamily) GD606_04605 PF06689 ClpX C4-type zinc finger GD606_04605 PF10431 C-terminal, D2-small domain, of ClpB protein GD606_04610 PF00574 Clp protease GD606_04615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GD606_04615 PF05698 Bacterial trigger factor protein (TF) C-terminus GD606_04615 PF05697 Bacterial trigger factor protein (TF) GD606_04620 PF01925 Sulfite exporter TauE/SafE GD606_04630 PF05378 Hydantoinase/oxoprolinase N-terminal region GD606_04630 PF01968 Hydantoinase/oxoprolinase GD606_04635 PF00180 Isocitrate/isopropylmalate dehydrogenase GD606_04645 PF01551 Peptidase family M23 GD606_04645 PF08460 Bacterial SH3 domain GD606_04660 PF17969 L,D-transpeptidase C-terminal domain GD606_04660 PF03734 L,D-transpeptidase catalytic domain GD606_04665 PF00881 Nitroreductase family GD606_04670 PF00877 NlpC/P60 family GD606_04675 PF00512 His Kinase A (phospho-acceptor) domain GD606_04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_04675 PF00989 PAS fold GD606_04690 PF00005 ABC transporter GD606_04690 PF08402 TOBE domain GD606_04695 PF00528 Binding-protein-dependent transport system inner membrane component GD606_04700 PF00528 Binding-protein-dependent transport system inner membrane component GD606_04705 PF13416 Bacterial extracellular solute-binding protein GD606_04720 PF03193 RsgA GTPase GD606_04745 PF03840 Preprotein translocase SecG subunit GD606_04750 PF00121 Triosephosphate isomerase GD606_04755 PF00162 Phosphoglycerate kinase GD606_04760 PF00293 NUDIX domain GD606_04775 PF00581 Rhodanese-like domain GD606_04785 PF04107 Glutamate-cysteine ligase family 2(GCS2) GD606_04805 PF01645 Conserved region in glutamate synthase GD606_04805 PF13187 4Fe-4S dicluster domain GD606_04810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GD606_04810 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_04825 PF01258 Prokaryotic dksA/traR C4-type zinc finger GD606_04840 PF02421 Ferrous iron transport protein B GD606_04840 PF07670 Nucleoside recognition GD606_04840 PF17910 FeoB cytosolic helical domain GD606_04840 PF07664 Ferrous iron transport protein B C terminus GD606_04840 PF04023 FeoA domain GD606_04875 PF01734 Patatin-like phospholipase GD606_04885 PF00589 Phage integrase family GD606_04895 PF04474 Protein of unknown function (DUF554) GD606_04900 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GD606_04905 PF02492 CobW/HypB/UreG, nucleotide-binding domain GD606_04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_04915 PF00672 HAMP domain GD606_04915 PF18698 Histidine kinase sensor domain GD606_04915 PF00512 His Kinase A (phospho-acceptor) domain GD606_04915 PF00989 PAS fold GD606_04920 PF01649 Ribosomal protein S20 GD606_04925 PF05746 DALR anticodon binding domain GD606_04925 PF02092 Glycyl-tRNA synthetase beta subunit GD606_04930 PF02091 Glycyl-tRNA synthetase alpha subunit GD606_04935 PF02565 Recombination protein O C terminal GD606_04935 PF11967 Recombination protein O N terminal GD606_04940 PF13464 Domain of unknown function (DUF4115) GD606_04945 PF00639 PPIC-type PPIASE domain GD606_04945 PF09312 SurA N-terminal domain GD606_04955 PF02559 CarD-like/TRCF domain GD606_04955 PF00270 DEAD/DEAH box helicase GD606_04955 PF00271 Helicase conserved C-terminal domain GD606_04955 PF17757 UvrB interaction domain GD606_04955 PF03461 TRCF domain GD606_04960 PF01584 CheW-like domain GD606_04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_04975 PF00512 His Kinase A (phospho-acceptor) domain GD606_04975 PF00989 PAS fold GD606_04980 PF01176 Translation initiation factor 1A / IF-1 GD606_04985 PF00753 Metallo-beta-lactamase superfamily GD606_04985 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GD606_04985 PF10996 Beta-Casp domain GD606_04990 PF03641 Possible lysine decarboxylase GD606_05000 PF08459 UvrC Helix-hairpin-helix N-terminal GD606_05000 PF02151 UvrB/uvrC motif GD606_05000 PF01541 GIY-YIG catalytic domain GD606_05010 PF00923 Transaldolase/Fructose-6-phosphate aldolase GD606_05020 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GD606_05025 PF00155 Aminotransferase class I and II GD606_05030 PF00589 Phage integrase family GD606_05030 PF02899 Phage integrase, N-terminal SAM-like domain GD606_05035 PF02272 DHHA1 domain GD606_05035 PF00571 CBS domain GD606_05035 PF01743 Poly A polymerase head domain GD606_05035 PF12627 Probable RNA and SrmB- binding site of polymerase A GD606_05035 PF01368 DHH family GD606_05040 PF00815 Histidinol dehydrogenase GD606_05045 PF01259 SAICAR synthetase GD606_05055 PF12950 TaqI-like C-terminal specificity domain GD606_05055 PF02384 N-6 DNA Methylase GD606_05080 PF00589 Phage integrase family GD606_05085 PF14659 Phage integrase, N-terminal SAM-like domain GD606_05085 PF00589 Phage integrase family GD606_05095 PF03741 Integral membrane protein TerC family GD606_05105 PF13193 AMP-binding enzyme C-terminal domain GD606_05105 PF00501 AMP-binding enzyme GD606_05105 PF16177 Acetyl-coenzyme A synthetase N-terminus GD606_05110 PF01969 Protein of unknown function DUF111 GD606_05115 PF00731 AIR carboxylase GD606_05145 PF13180 PDZ domain GD606_05150 PF00288 GHMP kinases N terminal domain GD606_05150 PF08544 GHMP kinases C terminal GD606_05160 PF14572 Phosphoribosyl synthetase-associated domain GD606_05160 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GD606_05165 PF01386 Ribosomal L25p family GD606_05165 PF14693 Ribosomal protein TL5, C-terminal domain GD606_05170 PF01195 Peptidyl-tRNA hydrolase GD606_05180 PF07498 Rho termination factor, N-terminal domain GD606_05180 PF07497 Rho termination factor, RNA-binding domain GD606_05180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GD606_05185 PF01435 Peptidase family M48 GD606_05185 PF13181 Tetratricopeptide repeat GD606_05195 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain GD606_05195 PF07678 A-macroglobulin TED domain GD606_05195 PF01835 MG2 domain GD606_05195 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain GD606_05195 PF11974 Bacterial alpha-2-macroglobulin MG3 domain GD606_05195 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain GD606_05195 PF17962 Bacterial macroglobulin domain 6 GD606_05195 PF07703 Alpha-2-macroglobulin bait region domain GD606_05195 PF00207 Alpha-2-macroglobulin family GD606_05205 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GD606_05210 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GD606_05225 PF00072 Response regulator receiver domain GD606_05225 PF01339 CheB methylesterase GD606_05230 PF03705 CheR methyltransferase, all-alpha domain GD606_05230 PF01739 CheR methyltransferase, SAM binding domain GD606_05235 PF01584 CheW-like domain GD606_05240 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_05240 PF01627 Hpt domain GD606_05240 PF01584 CheW-like domain GD606_05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_05245 PF00072 Response regulator receiver domain GD606_05275 PF03975 CheD chemotactic sensory transduction GD606_05285 PF01171 PP-loop family GD606_05290 PF01476 LysM domain GD606_05290 PF08525 Opacity-associated protein A N-terminal motif GD606_05290 PF01551 Peptidase family M23 GD606_05295 PF01311 Bacterial export proteins, family 1 GD606_05300 PF01312 FlhB HrpN YscU SpaS Family GD606_05305 PF00771 FHIPEP family GD606_05315 PF10609 NUBPL iron-transfer P-loop NTPase GD606_05320 PF04545 Sigma-70, region 4 GD606_05320 PF04542 Sigma-70 region 2 GD606_05320 PF04539 Sigma-70 region 3 GD606_05350 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GD606_05360 PF18073 Rubredoxin metal binding domain GD606_05370 PF00156 Phosphoribosyl transferase domain GD606_05380 PF00578 AhpC/TSA family GD606_05385 PF00809 Pterin binding enzyme GD606_05385 PF02310 B12 binding domain GD606_05385 PF02965 Vitamin B12 dependent methionine synthase, activation domain GD606_05385 PF02607 B12 binding domain GD606_05385 PF02574 Homocysteine S-methyltransferase GD606_05390 PF04542 Sigma-70 region 2 GD606_05390 PF04545 Sigma-70, region 4 GD606_05390 PF00140 Sigma-70 factor, region 1.2 GD606_05405 PF02502 Ribose/Galactose Isomerase GD606_05410 PF02780 Transketolase, C-terminal domain GD606_05410 PF02779 Transketolase, pyrimidine binding domain GD606_05410 PF00456 Transketolase, thiamine diphosphate binding domain GD606_05415 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GD606_05420 PF13187 4Fe-4S dicluster domain GD606_05420 PF02906 Iron only hydrogenase large subunit, C-terminal domain GD606_05425 PF02256 Iron hydrogenase small subunit GD606_05430 PF13649 Methyltransferase domain GD606_05460 PF00041 Fibronectin type III domain GD606_05460 PF00704 Glycosyl hydrolases family 18 GD606_05465 PF00152 tRNA synthetases class II (D, K and N) GD606_05465 PF01336 OB-fold nucleic acid binding domain GD606_05475 PF00448 SRP54-type protein, GTPase domain GD606_05475 PF02881 SRP54-type protein, helical bundle domain GD606_05480 PF00072 Response regulator receiver domain GD606_05490 PF00156 Phosphoribosyl transferase domain GD606_05495 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GD606_05495 PF02142 MGS-like domain GD606_05495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD606_05510 PF00133 tRNA synthetases class I (I, L, M and V) GD606_05510 PF06827 Zinc finger found in FPG and IleRS GD606_05510 PF08264 Anticodon-binding domain of tRNA GD606_05515 PF01252 Signal peptidase (SPase) II GD606_05545 PF00700 Bacterial flagellin C-terminal helical region GD606_05545 PF00669 Bacterial flagellin N-terminal helical region GD606_05550 PF00301 Rubredoxin GD606_05555 PF00301 Rubredoxin GD606_05560 PF02915 Rubrerythrin GD606_05580 PF00929 Exonuclease GD606_05585 PF00571 CBS domain GD606_05585 PF01380 SIS domain GD606_05590 PF04341 Protein of unknown function, DUF485 GD606_05595 PF00474 Sodium:solute symporter family GD606_05605 PF02743 Cache domain GD606_05605 PF00672 HAMP domain GD606_05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_05615 PF02470 MlaD protein GD606_05620 PF00005 ABC transporter GD606_05625 PF02405 Permease MlaE GD606_05635 PF01384 Phosphate transporter family GD606_05650 PF05598 Transposase domain (DUF772) GD606_05650 PF01609 Transposase DDE domain GD606_05665 PF01597 Glycine cleavage H-protein GD606_05670 PF02347 Glycine cleavage system P-protein GD606_05675 PF02347 Glycine cleavage system P-protein GD606_05680 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_05680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GD606_05685 PF02545 Maf-like protein GD606_05695 PF00378 Enoyl-CoA hydratase/isomerase GD606_05700 PF00464 Serine hydroxymethyltransferase GD606_05710 PF00464 Serine hydroxymethyltransferase GD606_05715 PF00512 His Kinase A (phospho-acceptor) domain GD606_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_05725 PF00691 OmpA family GD606_05730 PF07676 WD40-like Beta Propeller Repeat GD606_05740 PF02472 Biopolymer transport protein ExbD/TolR GD606_05745 PF01618 MotA/TolQ/ExbB proton channel family GD606_05750 PF02146 Sir2 family GD606_05790 PF01676 Metalloenzyme superfamily GD606_05790 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GD606_05795 PF01488 Shikimate / quinate 5-dehydrogenase GD606_05795 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GD606_05795 PF08501 Shikimate dehydrogenase substrate binding domain GD606_05810 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GD606_05810 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GD606_05810 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GD606_05820 PF02547 Queuosine biosynthesis protein GD606_05825 PF03099 Biotin/lipoate A/B protein ligase family GD606_05840 PF00512 His Kinase A (phospho-acceptor) domain GD606_05840 PF01627 Hpt domain GD606_05840 PF00072 Response regulator receiver domain GD606_05840 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_05840 PF00672 HAMP domain GD606_05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_05845 PF01933 Uncharacterised protein family UPF0052 GD606_05850 PF00871 Acetokinase family GD606_05855 PF07085 DRTGG domain GD606_05855 PF01515 Phosphate acetyl/butaryl transferase GD606_05860 PF00578 AhpC/TSA family GD606_05880 PF00075 RNase H GD606_05890 PF00005 ABC transporter GD606_05895 PF13472 GDSL-like Lipase/Acylhydrolase family GD606_05900 PF03309 Type III pantothenate kinase GD606_05905 PF00440 Bacterial regulatory proteins, tetR family GD606_05910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_05915 PF00005 ABC transporter GD606_05950 PF00005 ABC transporter GD606_05960 PF00440 Bacterial regulatory proteins, tetR family GD606_05965 PF00990 Diguanylate cyclase, GGDEF domain GD606_05965 PF00563 EAL domain GD606_05965 PF03707 Bacterial signalling protein N terminal repeat GD606_05970 PF13426 PAS domain GD606_05970 PF00990 Diguanylate cyclase, GGDEF domain GD606_05970 PF00563 EAL domain GD606_05980 PF02405 Permease MlaE GD606_05995 PF04333 MlaA lipoprotein GD606_06005 PF03916 Polysulphide reductase, NrfD GD606_06010 PF13247 4Fe-4S dicluster domain GD606_06010 PF00037 4Fe-4S binding domain GD606_06015 PF01568 Molydopterin dinucleotide binding domain GD606_06015 PF00384 Molybdopterin oxidoreductase GD606_06020 PF02085 Class III cytochrome C family GD606_06025 PF00483 Nucleotidyl transferase GD606_06025 PF01050 Mannose-6-phosphate isomerase GD606_06030 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GD606_06035 PF04055 Radical SAM superfamily GD606_06050 PF00877 NlpC/P60 family GD606_06060 PF13426 PAS domain GD606_06060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_06060 PF00672 HAMP domain GD606_06065 PF00294 pfkB family carbohydrate kinase GD606_06070 PF03091 CutA1 divalent ion tolerance protein GD606_06085 PF13180 PDZ domain GD606_06085 PF03572 Peptidase family S41 GD606_06125 PF01588 Putative tRNA binding domain GD606_06130 PF00291 Pyridoxal-phosphate dependent enzyme GD606_06135 PF04055 Radical SAM superfamily GD606_06135 PF00919 Uncharacterized protein family UPF0004 GD606_06150 PF04011 LemA family GD606_06215 PF05069 Phage virion morphogenesis family GD606_06230 PF10124 Mu-like prophage major head subunit gpT GD606_06255 PF03237 Terminase-like family GD606_06260 PF11985 Protein of unknown function (DUF3486) GD606_06415 PF00717 Peptidase S24-like GD606_06415 PF01381 Helix-turn-helix GD606_06425 PF01609 Transposase DDE domain GD606_06425 PF05598 Transposase domain (DUF772) GD606_06435 PF00460 Flagella basal body rod protein GD606_06435 PF07559 Flagellar basal body protein FlaE GD606_06435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_06435 PF07196 Flagellin hook IN motif GD606_06450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GD606_06475 PF02580 D-Tyr-tRNA(Tyr) deacylase GD606_06480 PF01242 6-pyruvoyl tetrahydropterin synthase GD606_06485 PF02811 PHP domain GD606_06485 PF07733 Bacterial DNA polymerase III alpha NTPase domain GD606_06485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GD606_06485 PF14579 Helix-hairpin-helix motif GD606_06485 PF01336 OB-fold nucleic acid binding domain GD606_06500 PF00719 Inorganic pyrophosphatase GD606_06520 PF02769 AIR synthase related protein, C-terminal domain GD606_06520 PF00586 AIR synthase related protein, N-terminal domain GD606_06525 PF01924 Hydrogenase formation hypA family GD606_06530 PF01455 HupF/HypC family GD606_06535 PF00691 OmpA family GD606_06535 PF13677 Membrane MotB of proton-channel complex MotA/MotB GD606_06540 PF01618 MotA/TolQ/ExbB proton channel family GD606_06545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_06545 PF00072 Response regulator receiver domain GD606_06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_06545 PF01627 Hpt domain GD606_06545 PF00672 HAMP domain GD606_06545 PF00512 His Kinase A (phospho-acceptor) domain GD606_06560 PF07478 D-ala D-ala ligase C-terminus GD606_06560 PF01820 D-ala D-ala ligase N-terminus GD606_06565 PF00117 Glutamine amidotransferase class-I GD606_06565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GD606_06575 PF00990 Diguanylate cyclase, GGDEF domain GD606_06575 PF00072 Response regulator receiver domain GD606_06600 PF01042 Endoribonuclease L-PSP GD606_06610 PF01594 AI-2E family transporter GD606_06615 PF02649 Type I GTP cyclohydrolase folE2 GD606_06620 PF01402 Ribbon-helix-helix protein, copG family GD606_06620 PF08753 NikR C terminal nickel binding domain GD606_06650 PF04231 Endonuclease I GD606_06665 PF08543 Phosphomethylpyrimidine kinase GD606_06680 PF14490 Helix-hairpin-helix containing domain GD606_06680 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GD606_06680 PF13538 UvrD-like helicase C-terminal domain GD606_06685 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GD606_06690 PF02132 RecR protein GD606_06690 PF13662 Toprim domain GD606_06695 PF02575 YbaB/EbfC DNA-binding family GD606_06700 PF12169 DNA polymerase III subunits gamma and tau domain III GD606_06705 PF01063 Amino-transferase class IV GD606_06710 PF01207 Dihydrouridine synthase (Dus) GD606_06715 PF02401 LytB protein GD606_06720 PF00072 Response regulator receiver domain GD606_06720 PF01584 CheW-like domain GD606_06725 PF01627 Hpt domain GD606_06725 PF00072 Response regulator receiver domain GD606_06725 PF00512 His Kinase A (phospho-acceptor) domain GD606_06725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_06735 PF16363 GDP-mannose 4,6 dehydratase GD606_06740 PF17992 Agarase CBM like domain GD606_06750 PF00664 ABC transporter transmembrane region GD606_06750 PF00005 ABC transporter GD606_06755 PF00535 Glycosyl transferase family 2 GD606_06775 PF13722 5TM C-terminal transporter carbon starvation CstA GD606_06775 PF02554 Carbon starvation protein CstA GD606_06780 PF01483 Proprotein convertase P-domain GD606_06780 PF00082 Subtilase family GD606_06785 PF00082 Subtilase family GD606_06785 PF02225 PA domain GD606_06785 PF05922 Peptidase inhibitor I9 GD606_06785 PF13860 FlgD Ig-like domain GD606_06795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_06815 PF02754 Cysteine-rich domain GD606_06820 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GD606_06825 PF00436 Single-strand binding protein family GD606_06840 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GD606_06845 PF00289 Biotin carboxylase, N-terminal domain GD606_06845 PF02785 Biotin carboxylase C-terminal domain GD606_06845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD606_06855 PF00691 OmpA family GD606_06855 PF13677 Membrane MotB of proton-channel complex MotA/MotB GD606_06860 PF01618 MotA/TolQ/ExbB proton channel family GD606_06865 PF01048 Phosphorylase superfamily GD606_06890 PF00005 ABC transporter GD606_06890 PF08402 TOBE domain GD606_06895 PF00528 Binding-protein-dependent transport system inner membrane component GD606_06900 PF12849 PBP superfamily domain GD606_06905 PF00700 Bacterial flagellin C-terminal helical region GD606_06905 PF00669 Bacterial flagellin N-terminal helical region GD606_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD606_06910 PF03466 LysR substrate binding domain GD606_06915 PF01196 Ribosomal protein L17 GD606_06920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GD606_06920 PF01000 RNA polymerase Rpb3/RpoA insert domain GD606_06920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GD606_06925 PF00163 Ribosomal protein S4/S9 N-terminal domain GD606_06925 PF01479 S4 domain GD606_06930 PF00411 Ribosomal protein S11 GD606_06935 PF00416 Ribosomal protein S13/S18 GD606_06940 PF00444 Ribosomal protein L36 GD606_06945 PF00557 Metallopeptidase family M24 GD606_06950 PF00344 SecY translocase GD606_06955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GD606_06960 PF00327 Ribosomal protein L30p/L7e GD606_06965 PF00333 Ribosomal protein S5, N-terminal domain GD606_06965 PF03719 Ribosomal protein S5, C-terminal domain GD606_06970 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GD606_06975 PF00347 Ribosomal protein L6 GD606_06980 PF00410 Ribosomal protein S8 GD606_06985 PF00253 Ribosomal protein S14p/S29e GD606_06990 PF00281 Ribosomal protein L5 GD606_06990 PF00673 ribosomal L5P family C-terminus GD606_06995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GD606_06995 PF00467 KOW motif GD606_07000 PF00238 Ribosomal protein L14p/L23e GD606_07005 PF00366 Ribosomal protein S17 GD606_07010 PF00831 Ribosomal L29 protein GD606_07015 PF00252 Ribosomal protein L16p/L10e GD606_07020 PF07650 KH domain GD606_07020 PF00189 Ribosomal protein S3, C-terminal domain GD606_07025 PF00237 Ribosomal protein L22p/L17e GD606_07030 PF00203 Ribosomal protein S19 GD606_07035 PF00181 Ribosomal Proteins L2, RNA binding domain GD606_07035 PF03947 Ribosomal Proteins L2, C-terminal domain GD606_07040 PF00276 Ribosomal protein L23 GD606_07045 PF00573 Ribosomal protein L4/L1 family GD606_07050 PF00297 Ribosomal protein L3 GD606_07055 PF00338 Ribosomal protein S10p/S20e GD606_07060 PF03143 Elongation factor Tu C-terminal domain GD606_07060 PF03144 Elongation factor Tu domain 2 GD606_07060 PF00009 Elongation factor Tu GTP binding domain GD606_07065 PF00009 Elongation factor Tu GTP binding domain GD606_07065 PF03764 Elongation factor G, domain IV GD606_07065 PF14492 Elongation Factor G, domain II GD606_07065 PF00679 Elongation factor G C-terminus GD606_07065 PF03144 Elongation factor Tu domain 2 GD606_07070 PF00177 Ribosomal protein S7p/S5e GD606_07075 PF00164 Ribosomal protein S12/S23 GD606_07085 PF00403 Heavy-metal-associated domain GD606_07090 PF00977 Histidine biosynthesis protein GD606_07100 PF00475 Imidazoleglycerol-phosphate dehydratase GD606_07105 PF02416 mttA/Hcf106 family GD606_07110 PF00117 Glutamine amidotransferase class-I GD606_07110 PF00958 GMP synthase C terminal domain GD606_07110 PF02540 NAD synthase GD606_07115 PF00571 CBS domain GD606_07115 PF00478 IMP dehydrogenase / GMP reductase domain GD606_07120 PF00005 ABC transporter GD606_07125 PF12399 Branched-chain amino acid ATP-binding cassette transporter GD606_07125 PF00005 ABC transporter GD606_07130 PF02653 Branched-chain amino acid transport system / permease component GD606_07130 PF11862 Domain of unknown function (DUF3382) GD606_07135 PF02653 Branched-chain amino acid transport system / permease component GD606_07155 PF01578 Cytochrome C assembly protein GD606_07170 PF00005 ABC transporter GD606_07175 PF01578 Cytochrome C assembly protein GD606_07175 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GD606_07180 PF03100 CcmE GD606_07185 PF00571 CBS domain GD606_07185 PF01595 Cyclin M transmembrane N-terminal domain GD606_07190 PF00266 Aminotransferase class-V GD606_07195 PF00005 ABC transporter GD606_07200 PF02632 BioY family GD606_07260 PF01467 Cytidylyltransferase-like GD606_07265 PF00171 Aldehyde dehydrogenase family GD606_07285 PF01590 GAF domain GD606_07285 PF00158 Sigma-54 interaction domain GD606_07285 PF02954 Bacterial regulatory protein, Fis family GD606_07300 PF16591 Helical bimodular sensor domain GD606_07300 PF00672 HAMP domain GD606_07300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_07300 PF16591 Helical bimodular sensor domain GD606_07300 PF00672 HAMP domain GD606_07300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_07305 PF01584 CheW-like domain GD606_07310 PF01584 CheW-like domain GD606_07310 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_07310 PF01627 Hpt domain GD606_07340 PF02754 Cysteine-rich domain GD606_07345 PF11870 Domain of unknown function (DUF3390) GD606_07345 PF02589 LUD domain GD606_07345 PF13183 4Fe-4S dicluster domain GD606_07350 PF02589 LUD domain GD606_07370 PF01739 CheR methyltransferase, SAM binding domain GD606_07370 PF03705 CheR methyltransferase, all-alpha domain GD606_07375 PF01894 Uncharacterised protein family UPF0047 GD606_07380 PF13742 OB-fold nucleic acid binding domain GD606_07380 PF02601 Exonuclease VII, large subunit GD606_07385 PF02609 Exonuclease VII small subunit GD606_07390 PF00348 Polyprenyl synthetase GD606_07395 PF02779 Transketolase, pyrimidine binding domain GD606_07395 PF02780 Transketolase, C-terminal domain GD606_07395 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GD606_07400 PF13193 AMP-binding enzyme C-terminal domain GD606_07400 PF00501 AMP-binding enzyme GD606_07405 PF00285 Citrate synthase, C-terminal domain GD606_07410 PF12794 Mechanosensitive ion channel inner membrane domain 1 GD606_07410 PF12795 Mechanosensitive ion channel porin domain GD606_07410 PF00924 Mechanosensitive ion channel GD606_07430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GD606_07430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GD606_07430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GD606_07435 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GD606_07440 PF01648 4'-phosphopantetheinyl transferase superfamily GD606_07445 PF01256 Carbohydrate kinase GD606_07445 PF03853 YjeF-related protein N-terminus GD606_07450 PF00478 IMP dehydrogenase / GMP reductase domain GD606_07450 PF00571 CBS domain GD606_07455 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GD606_07460 PF13840 ACT domain GD606_07460 PF01842 ACT domain GD606_07460 PF00696 Amino acid kinase family GD606_07465 PF08502 LeuA allosteric (dimerisation) domain GD606_07465 PF00682 HMGL-like GD606_07475 PF00582 Universal stress protein family GD606_07505 PF01048 Phosphorylase superfamily GD606_07510 PF00156 Phosphoribosyl transferase domain GD606_07515 PF01979 Amidohydrolase family GD606_07525 PF01546 Peptidase family M20/M25/M40 GD606_07525 PF07687 Peptidase dimerisation domain GD606_07530 PF01134 Glucose inhibited division protein A GD606_07530 PF13932 GidA associated domain GD606_07555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GD606_07555 PF00384 Molybdopterin oxidoreductase GD606_07555 PF01568 Molydopterin dinucleotide binding domain GD606_07560 PF13247 4Fe-4S dicluster domain GD606_07575 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GD606_07585 PF00557 Metallopeptidase family M24 GD606_07585 PF01321 Creatinase/Prolidase N-terminal domain GD606_07595 PF00486 Transcriptional regulatory protein, C terminal GD606_07595 PF00072 Response regulator receiver domain GD606_07605 PF01476 LysM domain GD606_07605 PF05257 CHAP domain GD606_07620 PF14849 YidC periplasmic domain GD606_07620 PF02096 60Kd inner membrane protein GD606_07625 PF01809 Putative membrane protein insertion efficiency factor GD606_07630 PF00825 Ribonuclease P GD606_07635 PF00468 Ribosomal protein L34 GD606_07680 PF00158 Sigma-54 interaction domain GD606_07680 PF01590 GAF domain GD606_07690 PF00072 Response regulator receiver domain GD606_07690 PF09308 LuxQ, periplasmic GD606_07690 PF00512 His Kinase A (phospho-acceptor) domain GD606_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_07695 PF13282 Domain of unknown function (DUF4070) GD606_07695 PF04055 Radical SAM superfamily GD606_07695 PF02310 B12 binding domain GD606_07700 PF10091 Putative glucoamylase GD606_07700 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GD606_07700 PF06165 Glycosyltransferase family 36 GD606_07765 PF00158 Sigma-54 interaction domain GD606_07765 PF00072 Response regulator receiver domain GD606_07765 PF02954 Bacterial regulatory protein, Fis family GD606_07770 PF08448 PAS fold GD606_07770 PF13188 PAS domain GD606_07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_07770 PF00072 Response regulator receiver domain GD606_07770 PF00512 His Kinase A (phospho-acceptor) domain GD606_07780 PF01925 Sulfite exporter TauE/SafE GD606_07790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GD606_07790 PF00391 PEP-utilising enzyme, mobile domain GD606_07795 PF02954 Bacterial regulatory protein, Fis family GD606_07795 PF00158 Sigma-54 interaction domain GD606_07795 PF00072 Response regulator receiver domain GD606_07810 PF00149 Calcineurin-like phosphoesterase GD606_07815 PF02646 RmuC family GD606_07850 PF04324 BFD-like [2Fe-2S] binding domain GD606_07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_07855 PF08240 Alcohol dehydrogenase GroES-like domain GD606_07855 PF00107 Zinc-binding dehydrogenase GD606_07860 PF00465 Iron-containing alcohol dehydrogenase GD606_07865 PF00989 PAS fold GD606_07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_07865 PF00512 His Kinase A (phospho-acceptor) domain GD606_07870 PF02954 Bacterial regulatory protein, Fis family GD606_07870 PF00072 Response regulator receiver domain GD606_07870 PF00158 Sigma-54 interaction domain GD606_07875 PF02028 BCCT, betaine/carnitine/choline family transporter GD606_07880 PF12804 MobA-like NTP transferase domain GD606_07890 PF01799 [2Fe-2S] binding domain GD606_07890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GD606_07890 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GD606_07895 PF00111 2Fe-2S iron-sulfur cluster binding domain GD606_07895 PF01799 [2Fe-2S] binding domain GD606_07900 PF00892 EamA-like transporter family GD606_07905 PF00158 Sigma-54 interaction domain GD606_07905 PF02954 Bacterial regulatory protein, Fis family GD606_07905 PF00072 Response regulator receiver domain GD606_07915 PF03466 LysR substrate binding domain GD606_07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD606_07920 PF00318 Ribosomal protein S2 GD606_07925 PF00889 Elongation factor TS GD606_07930 PF00696 Amino acid kinase family GD606_07935 PF01765 Ribosome recycling factor GD606_07940 PF01255 Putative undecaprenyl diphosphate synthase GD606_07945 PF02583 Metal-sensitive transcriptional repressor GD606_07965 PF13443 Cro/C1-type HTH DNA-binding domain GD606_07970 PF09084 NMT1/THI5 like GD606_07975 PF00672 HAMP domain GD606_07975 PF07228 Stage II sporulation protein E (SpoIIE) GD606_07980 PF02021 Uncharacterised protein family UPF0102 GD606_07985 PF00155 Aminotransferase class I and II GD606_08000 PF17770 Ribonuclease J C-terminal domain GD606_08000 PF00753 Metallo-beta-lactamase superfamily GD606_08000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GD606_08005 PF01557 Fumarylacetoacetate (FAA) hydrolase family GD606_08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_08010 PF00512 His Kinase A (phospho-acceptor) domain GD606_08010 PF09308 LuxQ, periplasmic GD606_08010 PF00072 Response regulator receiver domain GD606_08045 PF01471 Putative peptidoglycan binding domain GD606_08045 PF01510 N-acetylmuramoyl-L-alanine amidase GD606_08045 PF01476 LysM domain GD606_08055 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX GD606_08060 PF03062 MBOAT, membrane-bound O-acyltransferase family GD606_08085 PF00132 Bacterial transferase hexapeptide (six repeats) GD606_08090 PF00291 Pyridoxal-phosphate dependent enzyme GD606_08095 PF00266 Aminotransferase class-V GD606_08100 PF01592 NifU-like N terminal domain GD606_08100 PF04324 BFD-like [2Fe-2S] binding domain GD606_08100 PF01106 NifU-like domain GD606_08105 PF01734 Patatin-like phospholipase GD606_08110 PF02653 Branched-chain amino acid transport system / permease component GD606_08115 PF09383 NIL domain GD606_08115 PF00005 ABC transporter GD606_08120 PF00334 Nucleoside diphosphate kinase GD606_08125 PF14748 Pyrroline-5-carboxylate reductase dimerisation GD606_08125 PF03807 NADP oxidoreductase coenzyme F420-dependent GD606_08130 PF00313 'Cold-shock' DNA-binding domain GD606_08135 PF03186 CobD/Cbib protein GD606_08140 PF04321 RmlD substrate binding domain GD606_08145 PF16363 GDP-mannose 4,6 dehydratase GD606_08165 PF00588 SpoU rRNA Methylase family GD606_08180 PF03471 Transporter associated domain GD606_08180 PF00571 CBS domain GD606_08185 PF00795 Carbon-nitrogen hydrolase GD606_08195 PF00990 Diguanylate cyclase, GGDEF domain GD606_08195 PF17158 Membrane-associated sensor, integral membrane domain GD606_08200 PF10609 NUBPL iron-transfer P-loop NTPase GD606_08215 PF01370 NAD dependent epimerase/dehydratase family GD606_08225 PF02913 FAD linked oxidases, C-terminal domain GD606_08225 PF01565 FAD binding domain GD606_08230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GD606_08230 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_08260 PF17200 Single Cache domain 2 GD606_08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_08260 PF00672 HAMP domain GD606_08270 PF00905 Penicillin binding protein transpeptidase domain GD606_08275 PF02769 AIR synthase related protein, C-terminal domain GD606_08275 PF00586 AIR synthase related protein, N-terminal domain GD606_08295 PF00902 Sec-independent protein translocase protein (TatC) GD606_08300 PF02705 K+ potassium transporter GD606_08310 PF01272 Transcription elongation factor, GreA/GreB, C-term GD606_08310 PF03449 Transcription elongation factor, N-terminal GD606_08315 PF00512 His Kinase A (phospho-acceptor) domain GD606_08315 PF00072 Response regulator receiver domain GD606_08315 PF09308 LuxQ, periplasmic GD606_08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_08325 PF17827 PrmC N-terminal domain GD606_08325 PF13847 Methyltransferase domain GD606_08330 PF00472 RF-1 domain GD606_08330 PF03462 PCRF domain GD606_08335 PF07136 Protein of unknown function (DUF1385) GD606_08340 PF01197 Ribosomal protein L31 GD606_08355 PF02463 RecF/RecN/SMC N terminal domain GD606_08375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_08375 PF02743 Cache domain GD606_08375 PF00672 HAMP domain GD606_08380 PF06180 Cobalt chelatase (CbiK) GD606_08405 PF08448 PAS fold GD606_08405 PF13188 PAS domain GD606_08405 PF00512 His Kinase A (phospho-acceptor) domain GD606_08405 PF00072 Response regulator receiver domain GD606_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_08450 PF01810 LysE type translocator GD606_08455 PF00919 Uncharacterized protein family UPF0004 GD606_08455 PF18693 TRAM domain GD606_08455 PF04055 Radical SAM superfamily GD606_08460 PF12327 FtsZ family, C-terminal domain GD606_08460 PF00091 Tubulin/FtsZ family, GTPase domain GD606_08465 PF02491 SHS2 domain inserted in FTSA GD606_08470 PF03799 Cell division protein FtsQ GD606_08470 PF08478 POTRA domain, FtsQ-type GD606_08475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GD606_08475 PF01565 FAD binding domain GD606_08480 PF01225 Mur ligase family, catalytic domain GD606_08480 PF02875 Mur ligase family, glutamate ligase domain GD606_08480 PF08245 Mur ligase middle domain GD606_08485 PF04101 Glycosyltransferase family 28 C-terminal domain GD606_08485 PF03033 Glycosyltransferase family 28 N-terminal domain GD606_08490 PF01098 Cell cycle protein GD606_08495 PF08245 Mur ligase middle domain GD606_08500 PF00953 Glycosyl transferase family 4 GD606_08500 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GD606_08505 PF02875 Mur ligase family, glutamate ligase domain GD606_08505 PF01225 Mur ligase family, catalytic domain GD606_08505 PF08245 Mur ligase middle domain GD606_08510 PF01225 Mur ligase family, catalytic domain GD606_08510 PF08245 Mur ligase middle domain GD606_08510 PF02875 Mur ligase family, glutamate ligase domain GD606_08515 PF00905 Penicillin binding protein transpeptidase domain GD606_08515 PF03717 Penicillin-binding Protein dimerisation domain GD606_08525 PF01795 MraW methylase family GD606_08530 PF02381 MraZ protein, putative antitoxin-like GD606_08535 PF11871 Domain of unknown function (DUF3391) GD606_08535 PF01966 HD domain GD606_08550 PF07690 Major Facilitator Superfamily GD606_08560 PF01292 Prokaryotic cytochrome b561 GD606_08565 PF00572 Ribosomal protein L13 GD606_08570 PF00380 Ribosomal protein S9/S16 GD606_08575 PF00211 Adenylate and Guanylate cyclase catalytic domain GD606_08580 PF10396 GTP-binding protein TrmE N-terminus GD606_08580 PF12631 MnmE helical domain GD606_08580 PF01926 50S ribosome-binding GTPase GD606_08590 PF02608 ABC transporter substrate-binding protein PnrA-like GD606_08595 PF00005 ABC transporter GD606_08605 PF02653 Branched-chain amino acid transport system / permease component GD606_08640 PF08448 PAS fold GD606_08640 PF00072 Response regulator receiver domain GD606_08640 PF00512 His Kinase A (phospho-acceptor) domain GD606_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_08640 PF13188 PAS domain GD606_08645 PF08668 HDOD domain GD606_08650 PF00158 Sigma-54 interaction domain GD606_08650 PF00072 Response regulator receiver domain GD606_08650 PF02954 Bacterial regulatory protein, Fis family GD606_08660 PF00072 Response regulator receiver domain GD606_08660 PF00486 Transcriptional regulatory protein, C terminal GD606_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_08685 PF13426 PAS domain GD606_08685 PF00072 Response regulator receiver domain GD606_08695 PF01584 CheW-like domain GD606_08700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_08700 PF08447 PAS fold GD606_08700 PF13426 PAS domain GD606_08710 PF00005 ABC transporter GD606_08715 PF00528 Binding-protein-dependent transport system inner membrane component GD606_08720 PF13419 Haloacid dehalogenase-like hydrolase GD606_08725 PF00202 Aminotransferase class-III GD606_08730 PF00266 Aminotransferase class-V GD606_08755 PF00561 alpha/beta hydrolase fold GD606_08800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GD606_08800 PF03129 Anticodon binding domain GD606_08800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GD606_08805 PF00707 Translation initiation factor IF-3, C-terminal domain GD606_08805 PF05198 Translation initiation factor IF-3, N-terminal domain GD606_08810 PF01632 Ribosomal protein L35 GD606_08815 PF00453 Ribosomal protein L20 GD606_08820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GD606_08820 PF01409 tRNA synthetases class II core domain (F) GD606_08835 PF03484 tRNA synthetase B5 domain GD606_08835 PF03483 B3/4 domain GD606_08835 PF01588 Putative tRNA binding domain GD606_08835 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GD606_08835 PF03147 Ferredoxin-fold anticodon binding domain GD606_08840 PF13411 MerR HTH family regulatory protein GD606_08865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GD606_08865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GD606_08865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GD606_08875 PF02621 Menaquinone biosynthesis GD606_08880 PF00348 Polyprenyl synthetase GD606_08885 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GD606_08885 PF00586 AIR synthase related protein, N-terminal domain GD606_08885 PF02769 AIR synthase related protein, C-terminal domain GD606_08890 PF13435 Cytochrome c554 and c-prime GD606_08895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_08895 PF00672 HAMP domain GD606_08895 PF13426 PAS domain GD606_08900 PF00301 Rubredoxin GD606_08905 PF00753 Metallo-beta-lactamase superfamily GD606_08905 PF00258 Flavodoxin GD606_08910 PF00216 Bacterial DNA-binding protein GD606_08920 PF00011 Hsp20/alpha crystallin family GD606_08935 PF00183 Hsp90 protein GD606_08940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GD606_08940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GD606_08950 PF12802 MarR family GD606_08980 PF04002 RadC-like JAB domain GD606_08985 PF00708 Acylphosphatase GD606_08990 PF00004 ATPase family associated with various cellular activities (AAA) GD606_08990 PF05362 Lon protease (S16) C-terminal proteolytic domain GD606_08990 PF02190 ATP-dependent protease La (LON) substrate-binding domain GD606_08995 PF05154 TM2 domain GD606_09000 PF04055 Radical SAM superfamily GD606_09035 PF01027 Inhibitor of apoptosis-promoting Bax1 GD606_09040 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GD606_09045 PF00171 Aldehyde dehydrogenase family GD606_09045 PF00465 Iron-containing alcohol dehydrogenase GD606_09050 PF00684 DnaJ central domain GD606_09050 PF00226 DnaJ domain GD606_09050 PF01556 DnaJ C terminal domain GD606_09060 PF02683 Cytochrome C biogenesis protein transmembrane region GD606_09060 PF11412 Disulphide bond corrector protein DsbC GD606_09065 PF04371 Porphyromonas-type peptidyl-arginine deiminase GD606_09070 PF00994 Probable molybdopterin binding domain GD606_09070 PF03454 MoeA C-terminal region (domain IV) GD606_09070 PF03453 MoeA N-terminal region (domain I and II) GD606_09080 PF02685 Glucokinase GD606_09095 PF12727 PBP superfamily domain GD606_09095 PF12728 Helix-turn-helix domain GD606_09100 PF02535 ZIP Zinc transporter GD606_09105 PF01169 Uncharacterized protein family UPF0016 GD606_09130 PF01925 Sulfite exporter TauE/SafE GD606_09140 PF00582 Universal stress protein family GD606_09145 PF02954 Bacterial regulatory protein, Fis family GD606_09145 PF00158 Sigma-54 interaction domain GD606_09145 PF00072 Response regulator receiver domain GD606_09150 PF00877 NlpC/P60 family GD606_09160 PF13458 Periplasmic binding protein GD606_09165 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_09165 PF01627 Hpt domain GD606_09165 PF00512 His Kinase A (phospho-acceptor) domain GD606_09165 PF00672 HAMP domain GD606_09165 PF00072 Response regulator receiver domain GD606_09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_09175 PF03591 AzlC protein GD606_09180 PF01209 ubiE/COQ5 methyltransferase family GD606_09200 PF13186 Iron-sulfur cluster-binding domain GD606_09200 PF04055 Radical SAM superfamily GD606_09205 PF00490 Delta-aminolevulinic acid dehydratase GD606_09215 PF04055 Radical SAM superfamily GD606_09215 PF13186 Iron-sulfur cluster-binding domain GD606_09220 PF00563 EAL domain GD606_09220 PF03707 Bacterial signalling protein N terminal repeat GD606_09220 PF00990 Diguanylate cyclase, GGDEF domain GD606_09245 PF07195 Flagellar hook-associated protein 2 C-terminus GD606_09245 PF07196 Flagellin hook IN motif GD606_09245 PF02465 Flagellar hook-associated protein 2 N-terminus GD606_09250 PF00669 Bacterial flagellin N-terminal helical region GD606_09250 PF00700 Bacterial flagellin C-terminal helical region GD606_09255 PF00814 Glycoprotease family GD606_09260 PF17820 PDZ domain GD606_09260 PF02163 Peptidase family M50 GD606_09265 PF13288 DXP reductoisomerase C-terminal domain GD606_09265 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GD606_09265 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GD606_09285 PF11799 impB/mucB/samB family C-terminal domain GD606_09285 PF00817 impB/mucB/samB family GD606_09295 PF00343 Carbohydrate phosphorylase GD606_09300 PF13677 Membrane MotB of proton-channel complex MotA/MotB GD606_09300 PF00691 OmpA family GD606_09310 PF00072 Response regulator receiver domain GD606_09310 PF00990 Diguanylate cyclase, GGDEF domain GD606_09320 PF07685 CobB/CobQ-like glutamine amidotransferase domain GD606_09320 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GD606_09325 PF08679 Dissimilatory sulfite reductase D (DsrD) GD606_09330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GD606_09330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GD606_09335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GD606_09335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GD606_09345 PF00425 chorismate binding enzyme GD606_09345 PF04715 Anthranilate synthase component I, N terminal region GD606_09395 PF01869 BadF/BadG/BcrA/BcrD ATPase family GD606_09410 PF00085 Thioredoxin GD606_09420 PF03466 LysR substrate binding domain GD606_09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD606_09440 PF00534 Glycosyl transferases group 1 GD606_09445 PF00733 Asparagine synthase GD606_09445 PF13537 Glutamine amidotransferase domain GD606_09455 PF01520 N-acetylmuramoyl-L-alanine amidase GD606_09455 PF11741 AMIN domain GD606_09460 PF01380 SIS domain GD606_09465 PF01725 Ham1 family GD606_09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_09470 PF00512 His Kinase A (phospho-acceptor) domain GD606_09470 PF00989 PAS fold GD606_09475 PF00919 Uncharacterized protein family UPF0004 GD606_09475 PF04055 Radical SAM superfamily GD606_09475 PF18693 TRAM domain GD606_09485 PF13439 Glycosyltransferase Family 4 GD606_09485 PF00534 Glycosyl transferases group 1 GD606_09490 PF13439 Glycosyltransferase Family 4 GD606_09490 PF00534 Glycosyl transferases group 1 GD606_09500 PF00575 S1 RNA binding domain GD606_09505 PF01343 Peptidase family S49 GD606_09510 PF00391 PEP-utilising enzyme, mobile domain GD606_09510 PF02896 PEP-utilising enzyme, TIM barrel domain GD606_09510 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GD606_09515 PF00675 Insulinase (Peptidase family M16) GD606_09515 PF08367 Peptidase M16C associated GD606_09515 PF05193 Peptidase M16 inactive domain GD606_09520 PF00691 OmpA family GD606_09530 PF01494 FAD binding domain GD606_09535 PF13419 Haloacid dehalogenase-like hydrolase GD606_09545 PF01209 ubiE/COQ5 methyltransferase family GD606_09550 PF13847 Methyltransferase domain GD606_09555 PF02446 4-alpha-glucanotransferase GD606_09560 PF01556 DnaJ C terminal domain GD606_09560 PF00226 DnaJ domain GD606_09570 PF02861 Clp amino terminal domain, pathogenicity island component GD606_09570 PF00004 ATPase family associated with various cellular activities (AAA) GD606_09570 PF07724 AAA domain (Cdc48 subfamily) GD606_09570 PF17871 AAA lid domain GD606_09570 PF10431 C-terminal, D2-small domain, of ClpB protein GD606_09605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_09605 PF16591 Helical bimodular sensor domain GD606_09605 PF00672 HAMP domain GD606_09620 PF18125 RlmM ferredoxin-like domain GD606_09620 PF01728 FtsJ-like methyltransferase GD606_09625 PF00990 Diguanylate cyclase, GGDEF domain GD606_09625 PF00072 Response regulator receiver domain GD606_09630 PF01740 STAS domain GD606_09635 PF00155 Aminotransferase class I and II GD606_09635 PF00392 Bacterial regulatory proteins, gntR family GD606_09655 PF00365 Phosphofructokinase GD606_09675 PF00083 Sugar (and other) transporter GD606_09680 PF13193 AMP-binding enzyme C-terminal domain GD606_09680 PF00501 AMP-binding enzyme GD606_09700 PF01202 Shikimate kinase GD606_09705 PF00588 SpoU rRNA Methylase family GD606_09710 PF00924 Mechanosensitive ion channel GD606_09710 PF12795 Mechanosensitive ion channel porin domain GD606_09710 PF12794 Mechanosensitive ion channel inner membrane domain 1 GD606_09725 PF01209 ubiE/COQ5 methyltransferase family GD606_09740 PF00360 Phytochrome region GD606_09740 PF01590 GAF domain GD606_09740 PF00990 Diguanylate cyclase, GGDEF domain GD606_09740 PF00563 EAL domain GD606_09745 PF00005 ABC transporter GD606_09750 PF02653 Branched-chain amino acid transport system / permease component GD606_09750 PF11862 Domain of unknown function (DUF3382) GD606_09755 PF02653 Branched-chain amino acid transport system / permease component GD606_09760 PF13458 Periplasmic binding protein GD606_09765 PF00005 ABC transporter GD606_09765 PF12399 Branched-chain amino acid ATP-binding cassette transporter GD606_09780 PF00361 Proton-conducting membrane transporter GD606_09795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GD606_09795 PF00361 Proton-conducting membrane transporter GD606_09800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GD606_09805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GD606_09835 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GD606_09845 PF00361 Proton-conducting membrane transporter GD606_09850 PF00361 Proton-conducting membrane transporter GD606_09855 PF00361 Proton-conducting membrane transporter GD606_09865 PF00072 Response regulator receiver domain GD606_09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_09865 PF13188 PAS domain GD606_09865 PF00512 His Kinase A (phospho-acceptor) domain GD606_09865 PF08448 PAS fold GD606_09870 PF02954 Bacterial regulatory protein, Fis family GD606_09870 PF00072 Response regulator receiver domain GD606_09870 PF00158 Sigma-54 interaction domain GD606_09875 PF13188 PAS domain GD606_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_09875 PF00512 His Kinase A (phospho-acceptor) domain GD606_09875 PF08448 PAS fold GD606_09875 PF00072 Response regulator receiver domain GD606_09880 PF00072 Response regulator receiver domain GD606_09885 PF00258 Flavodoxin GD606_09885 PF00753 Metallo-beta-lactamase superfamily GD606_09895 PF00512 His Kinase A (phospho-acceptor) domain GD606_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_09895 PF09308 LuxQ, periplasmic GD606_09895 PF00072 Response regulator receiver domain GD606_09915 PF01960 ArgJ family GD606_09935 PF01043 SecA preprotein cross-linking domain GD606_09935 PF07517 SecA DEAD-like domain GD606_09935 PF02810 SEC-C motif GD606_09935 PF07516 SecA Wing and Scaffold domain GD606_09940 PF17805 AsnC-like ligand binding domain GD606_09945 PF00990 Diguanylate cyclase, GGDEF domain GD606_09945 PF00990 Diguanylate cyclase, GGDEF domain GD606_09945 PF00072 Response regulator receiver domain GD606_09945 PF00072 Response regulator receiver domain GD606_09975 PF14535 AMP-binding enzyme C-terminal domain GD606_09975 PF00501 AMP-binding enzyme GD606_09985 PF00005 ABC transporter GD606_09990 PF12399 Branched-chain amino acid ATP-binding cassette transporter GD606_09990 PF00005 ABC transporter GD606_09995 PF11862 Domain of unknown function (DUF3382) GD606_09995 PF02653 Branched-chain amino acid transport system / permease component GD606_10000 PF02653 Branched-chain amino acid transport system / permease component GD606_10030 PF02224 Cytidylate kinase GD606_10035 PF00155 Aminotransferase class I and II GD606_10040 PF00582 Universal stress protein family GD606_10060 PF03062 MBOAT, membrane-bound O-acyltransferase family GD606_10110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GD606_10125 PF00512 His Kinase A (phospho-acceptor) domain GD606_10125 PF07689 KaiB domain GD606_10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_10130 PF00990 Diguanylate cyclase, GGDEF domain GD606_10130 PF00072 Response regulator receiver domain GD606_10140 PF00072 Response regulator receiver domain GD606_10150 PF01584 CheW-like domain GD606_10150 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_10150 PF01627 Hpt domain GD606_10150 PF00072 Response regulator receiver domain GD606_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_10175 PF00128 Alpha amylase, catalytic domain GD606_10175 PF02806 Alpha amylase, C-terminal all-beta domain GD606_10175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GD606_10180 PF06865 Pyrimidine/purine nucleoside phosphorylase GD606_10195 PF00512 His Kinase A (phospho-acceptor) domain GD606_10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_10195 PF08448 PAS fold GD606_10195 PF13426 PAS domain GD606_10195 PF00072 Response regulator receiver domain GD606_10200 PF01177 Asp/Glu/Hydantoin racemase GD606_10215 PF01177 Asp/Glu/Hydantoin racemase GD606_10220 PF02872 5'-nucleotidase, C-terminal domain GD606_10220 PF00149 Calcineurin-like phosphoesterase GD606_10250 PF00857 Isochorismatase family GD606_10275 PF07694 5TMR of 5TMR-LYT GD606_10275 PF00990 Diguanylate cyclase, GGDEF domain GD606_10285 PF02195 ParB-like nuclease domain GD606_10285 PF17762 HTH domain found in ParB protein GD606_10305 PF00589 Phage integrase family GD606_10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_10345 PF09308 LuxQ, periplasmic GD606_10345 PF00072 Response regulator receiver domain GD606_10345 PF00512 His Kinase A (phospho-acceptor) domain GD606_10350 PF00005 ABC transporter GD606_10355 PF00005 ABC transporter GD606_10355 PF02687 FtsX-like permease family GD606_10355 PF12704 MacB-like periplasmic core domain GD606_10365 PF00440 Bacterial regulatory proteins, tetR family GD606_10370 PF03063 Prismane/CO dehydrogenase family GD606_10375 PF00990 Diguanylate cyclase, GGDEF domain GD606_10375 PF00072 Response regulator receiver domain GD606_10380 PF00990 Diguanylate cyclase, GGDEF domain GD606_10380 PF08448 PAS fold GD606_10390 PF01584 CheW-like domain GD606_10395 PF00672 HAMP domain GD606_10395 PF02743 Cache domain GD606_10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_10410 PF00589 Phage integrase family GD606_10465 PF13185 GAF domain GD606_10465 PF00158 Sigma-54 interaction domain GD606_10465 PF02954 Bacterial regulatory protein, Fis family GD606_10475 PF00528 Binding-protein-dependent transport system inner membrane component GD606_10480 PF00528 Binding-protein-dependent transport system inner membrane component GD606_10480 PF12911 N-terminal TM domain of oligopeptide transport permease C GD606_10485 PF13476 AAA domain GD606_10490 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GD606_10490 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GD606_10495 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GD606_10495 PF01464 Transglycosylase SLT domain GD606_10500 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GD606_10505 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GD606_10510 PF00361 Proton-conducting membrane transporter GD606_10525 PF00361 Proton-conducting membrane transporter GD606_10525 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus GD606_10530 PF00361 Proton-conducting membrane transporter GD606_10560 PF00990 Diguanylate cyclase, GGDEF domain GD606_10560 PF07694 5TMR of 5TMR-LYT GD606_10585 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GD606_10590 PF02915 Rubrerythrin GD606_10595 PF10417 C-terminal domain of 1-Cys peroxiredoxin GD606_10595 PF00578 AhpC/TSA family GD606_10605 PF01053 Cys/Met metabolism PLP-dependent enzyme GD606_10615 PF01464 Transglycosylase SLT domain GD606_10620 PF00994 Probable molybdopterin binding domain GD606_10620 PF02464 Competence-damaged protein GD606_10625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_10625 PF12729 Four helix bundle sensory module for signal transduction GD606_10625 PF00672 HAMP domain GD606_10630 PF01568 Molydopterin dinucleotide binding domain GD606_10630 PF10518 TAT (twin-arginine translocation) pathway signal sequence GD606_10630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GD606_10630 PF00384 Molybdopterin oxidoreductase GD606_10635 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GD606_10640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GD606_10645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GD606_10650 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GD606_10655 PF00146 NADH dehydrogenase GD606_10660 PF12838 4Fe-4S dicluster domain GD606_10665 PF13247 4Fe-4S dicluster domain GD606_10665 PF12800 4Fe-4S binding domain GD606_10685 PF08447 PAS fold GD606_10685 PF08448 PAS fold GD606_10685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_10690 PF01966 HD domain GD606_10690 PF00072 Response regulator receiver domain GD606_10695 PF00391 PEP-utilising enzyme, mobile domain GD606_10695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GD606_10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_10725 PF00672 HAMP domain GD606_10725 PF00072 Response regulator receiver domain GD606_10725 PF01627 Hpt domain GD606_10725 PF00512 His Kinase A (phospho-acceptor) domain GD606_10725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_10730 PF11066 Protein of unknown function (DUF2867) GD606_10730 PF13460 NAD(P)H-binding GD606_10750 PF01402 Ribbon-helix-helix protein, copG family GD606_10770 PF01609 Transposase DDE domain GD606_10770 PF05598 Transposase domain (DUF772) GD606_10780 PF01381 Helix-turn-helix GD606_10790 PF00072 Response regulator receiver domain GD606_10800 PF09115 DNA polymerase III, delta subunit, C terminal GD606_10805 PF00709 Adenylosuccinate synthetase GD606_10815 PF01808 AICARFT/IMPCHase bienzyme GD606_10815 PF02142 MGS-like domain GD606_10820 PF02660 Glycerol-3-phosphate acyltransferase GD606_10830 PF08668 HDOD domain GD606_10830 PF00563 EAL domain GD606_10845 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_10845 PF00072 Response regulator receiver domain GD606_10845 PF00672 HAMP domain GD606_10845 PF01627 Hpt domain GD606_10845 PF00512 His Kinase A (phospho-acceptor) domain GD606_10850 PF00072 Response regulator receiver domain GD606_10850 PF08769 Sporulation initiation factor Spo0A C terminal GD606_10870 PF08447 PAS fold GD606_10870 PF00990 Diguanylate cyclase, GGDEF domain GD606_10870 PF00563 EAL domain GD606_10870 PF08448 PAS fold GD606_10885 PF00749 tRNA synthetases class I (E and Q), catalytic domain GD606_10885 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GD606_10900 PF00753 Metallo-beta-lactamase superfamily GD606_10910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_10915 PF00873 AcrB/AcrD/AcrF family GD606_10925 PF01641 SelR domain GD606_10925 PF01625 Peptide methionine sulfoxide reductase GD606_10930 PF01544 CorA-like Mg2+ transporter protein GD606_10965 PF00403 Heavy-metal-associated domain GD606_10985 PF00689 Cation transporting ATPase, C-terminus GD606_10985 PF00690 Cation transporter/ATPase, N-terminus GD606_10990 PF01640 Peptidase C10 family GD606_10990 PF13734 Spi protease inhibitor GD606_11000 PF13734 Spi protease inhibitor GD606_11000 PF01640 Peptidase C10 family GD606_11010 PF13247 4Fe-4S dicluster domain GD606_11010 PF12800 4Fe-4S binding domain GD606_11020 PF00817 impB/mucB/samB family GD606_11020 PF11799 impB/mucB/samB family C-terminal domain GD606_11020 PF13438 Domain of unknown function (DUF4113) GD606_11025 PF00717 Peptidase S24-like GD606_11030 PF02563 Polysaccharide biosynthesis/export protein GD606_11040 PF00535 Glycosyl transferase family 2 GD606_11040 PF00534 Glycosyl transferases group 1 GD606_11045 PF00535 Glycosyl transferase family 2 GD606_11055 PF05159 Capsule polysaccharide biosynthesis protein GD606_11060 PF08240 Alcohol dehydrogenase GroES-like domain GD606_11060 PF16197 Ketoacyl-synthetase C-terminal extension GD606_11060 PF00109 Beta-ketoacyl synthase, N-terminal domain GD606_11060 PF14765 Polyketide synthase dehydratase GD606_11060 PF02801 Beta-ketoacyl synthase, C-terminal domain GD606_11060 PF00550 Phosphopantetheine attachment site GD606_11060 PF08659 KR domain GD606_11060 PF00698 Acyl transferase domain GD606_11065 PF00155 Aminotransferase class I and II GD606_11070 PF05159 Capsule polysaccharide biosynthesis protein GD606_11075 PF00583 Acetyltransferase (GNAT) family GD606_11080 PF00106 short chain dehydrogenase GD606_11105 PF14403 Circularly permuted ATP-grasp type 2 GD606_11110 PF02910 Fumarate reductase flavoprotein C-term GD606_11110 PF00890 FAD binding domain GD606_11120 PF03102 NeuB family GD606_11120 PF08666 SAF domain GD606_11130 PF01022 Bacterial regulatory protein, arsR family GD606_11155 PF07291 Methylamine utilisation protein MauE GD606_11160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GD606_11165 PF02641 Uncharacterized ACR, COG1993 GD606_11180 PF07969 Amidohydrolase family GD606_11185 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GD606_11195 PF00072 Response regulator receiver domain GD606_11195 PF00158 Sigma-54 interaction domain GD606_11205 PF01627 Hpt domain GD606_11205 PF00072 Response regulator receiver domain GD606_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11205 PF00512 His Kinase A (phospho-acceptor) domain GD606_11215 PF03435 Saccharopine dehydrogenase NADP binding domain GD606_11220 PF00135 Carboxylesterase family GD606_11230 PF00873 AcrB/AcrD/AcrF family GD606_11235 PF06826 Predicted Permease Membrane Region GD606_11235 PF02080 TrkA-C domain GD606_11240 PF00155 Aminotransferase class I and II GD606_11245 PF17763 Glutaminase/Asparaginase C-terminal domain GD606_11245 PF00710 Asparaginase, N-terminal GD606_11260 PF00005 ABC transporter GD606_11275 PF02653 Branched-chain amino acid transport system / permease component GD606_11280 PF00501 AMP-binding enzyme GD606_11285 PF00005 ABC transporter GD606_11285 PF12399 Branched-chain amino acid ATP-binding cassette transporter GD606_11305 PF00474 Sodium:solute symporter family GD606_11350 PF01032 FecCD transport family GD606_11355 PF00005 ABC transporter GD606_11370 PF01609 Transposase DDE domain GD606_11370 PF05598 Transposase domain (DUF772) GD606_11380 PF00313 'Cold-shock' DNA-binding domain GD606_11390 PF00571 CBS domain GD606_11390 PF01380 SIS domain GD606_11395 PF02348 Cytidylyltransferase GD606_11400 PF00793 DAHP synthetase I family GD606_11410 PF00924 Mechanosensitive ion channel GD606_11415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GD606_11435 PF04055 Radical SAM superfamily GD606_11435 PF02310 B12 binding domain GD606_11440 PF00535 Glycosyl transferase family 2 GD606_11445 PF04015 Domain of unknown function (DUF362) GD606_11450 PF02397 Bacterial sugar transferase GD606_11460 PF01593 Flavin containing amine oxidoreductase GD606_11470 PF13439 Glycosyltransferase Family 4 GD606_11470 PF00534 Glycosyl transferases group 1 GD606_11500 PF00550 Phosphopantetheine attachment site GD606_11510 PF00501 AMP-binding enzyme GD606_11510 PF00550 Phosphopantetheine attachment site GD606_11510 PF08242 Methyltransferase domain GD606_11510 PF00668 Condensation domain GD606_11515 PF00005 ABC transporter GD606_11520 PF00528 Binding-protein-dependent transport system inner membrane component GD606_11525 PF00528 Binding-protein-dependent transport system inner membrane component GD606_11535 PF00343 Carbohydrate phosphorylase GD606_11545 PF00873 AcrB/AcrD/AcrF family GD606_11550 PF00529 HlyD membrane-fusion protein of T1SS GD606_11550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_11555 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD606_11560 PF03600 Citrate transporter GD606_11575 PF00072 Response regulator receiver domain GD606_11575 PF00486 Transcriptional regulatory protein, C terminal GD606_11580 PF00672 HAMP domain GD606_11580 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_11580 PF00512 His Kinase A (phospho-acceptor) domain GD606_11580 PF00072 Response regulator receiver domain GD606_11580 PF01627 Hpt domain GD606_11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11590 PF01627 Hpt domain GD606_11590 PF01584 CheW-like domain GD606_11590 PF09078 CheY binding GD606_11590 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11595 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11595 PF01627 Hpt domain GD606_11595 PF07194 P2 response regulator binding domain GD606_11595 PF01584 CheW-like domain GD606_11610 PF00072 Response regulator receiver domain GD606_11625 PF02954 Bacterial regulatory protein, Fis family GD606_11625 PF00072 Response regulator receiver domain GD606_11625 PF00158 Sigma-54 interaction domain GD606_11635 PF13406 Transglycosylase SLT domain GD606_11645 PF00512 His Kinase A (phospho-acceptor) domain GD606_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11645 PF00072 Response regulator receiver domain GD606_11645 PF01627 Hpt domain GD606_11650 PF00834 Ribulose-phosphate 3 epimerase family GD606_11660 PF00072 Response regulator receiver domain GD606_11660 PF00158 Sigma-54 interaction domain GD606_11660 PF02954 Bacterial regulatory protein, Fis family GD606_11685 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_11685 PF04324 BFD-like [2Fe-2S] binding domain GD606_11700 PF01593 Flavin containing amine oxidoreductase GD606_11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11705 PF00512 His Kinase A (phospho-acceptor) domain GD606_11710 PF00158 Sigma-54 interaction domain GD606_11710 PF00072 Response regulator receiver domain GD606_11710 PF02954 Bacterial regulatory protein, Fis family GD606_11730 PF00135 Carboxylesterase family GD606_11775 PF00155 Aminotransferase class I and II GD606_11795 PF05384 Sensor protein DegS GD606_11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11795 PF07730 Histidine kinase GD606_11825 PF00436 Single-strand binding protein family GD606_11840 PF18818 Metallopeptidase superfamily domain GD606_11840 PF08401 Domain of unknown function (DUF1738) GD606_11840 PF13362 Toprim domain GD606_11855 PF00176 SNF2 family N-terminal domain GD606_11855 PF00271 Helicase conserved C-terminal domain GD606_11905 PF01609 Transposase DDE domain GD606_11905 PF05598 Transposase domain (DUF772) GD606_11935 PF01230 HIT domain GD606_11940 PF00216 Bacterial DNA-binding protein GD606_11945 PF03330 Lytic transglycolase GD606_11945 PF05036 Sporulation related domain GD606_11950 PF00072 Response regulator receiver domain GD606_11950 PF00486 Transcriptional regulatory protein, C terminal GD606_11955 PF00563 EAL domain GD606_11955 PF00990 Diguanylate cyclase, GGDEF domain GD606_11955 PF03707 Bacterial signalling protein N terminal repeat GD606_11965 PF13654 AAA domain GD606_11965 PF05362 Lon protease (S16) C-terminal proteolytic domain GD606_11970 PF03749 Sugar fermentation stimulation protein RE domain GD606_11970 PF17746 SfsA N-terminal OB domain GD606_11975 PF00155 Aminotransferase class I and II GD606_11980 PF00512 His Kinase A (phospho-acceptor) domain GD606_11980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_11980 PF00989 PAS fold GD606_11980 PF08447 PAS fold GD606_11990 PF00374 Nickel-dependent hydrogenase GD606_11995 PF06968 Biotin and Thiamin Synthesis associated domain GD606_11995 PF04055 Radical SAM superfamily GD606_12015 PF01455 HupF/HypC family GD606_12020 PF01924 Hydrogenase formation hypA family GD606_12025 PF00586 AIR synthase related protein, N-terminal domain GD606_12025 PF02769 AIR synthase related protein, C-terminal domain GD606_12030 PF03781 Sulfatase-modifying factor enzyme 1 GD606_12040 PF00005 ABC transporter GD606_12075 PF13180 PDZ domain GD606_12095 PF00211 Adenylate and Guanylate cyclase catalytic domain GD606_12115 PF08402 TOBE domain GD606_12115 PF00005 ABC transporter GD606_12120 PF00528 Binding-protein-dependent transport system inner membrane component GD606_12135 PF00465 Iron-containing alcohol dehydrogenase GD606_12145 PF00486 Transcriptional regulatory protein, C terminal GD606_12145 PF00072 Response regulator receiver domain GD606_12150 PF01339 CheB methylesterase GD606_12150 PF00072 Response regulator receiver domain GD606_12155 PF00072 Response regulator receiver domain GD606_12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12155 PF01627 Hpt domain GD606_12155 PF01584 CheW-like domain GD606_12165 PF08448 PAS fold GD606_12165 PF01339 CheB methylesterase GD606_12165 PF01739 CheR methyltransferase, SAM binding domain GD606_12165 PF03705 CheR methyltransferase, all-alpha domain GD606_12170 PF01584 CheW-like domain GD606_12175 PF02743 Cache domain GD606_12175 PF00672 HAMP domain GD606_12175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_12180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_12190 PF02954 Bacterial regulatory protein, Fis family GD606_12190 PF01590 GAF domain GD606_12190 PF00158 Sigma-54 interaction domain GD606_12195 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family GD606_12200 PF00543 Nitrogen regulatory protein P-II GD606_12205 PF00543 Nitrogen regulatory protein P-II GD606_12210 PF00148 Nitrogenase component 1 type Oxidoreductase GD606_12215 PF03139 Vanadium/alternative nitrogenase delta subunit GD606_12220 PF00148 Nitrogenase component 1 type Oxidoreductase GD606_12240 PF00171 Aldehyde dehydrogenase family GD606_12245 PF09308 LuxQ, periplasmic GD606_12245 PF00512 His Kinase A (phospho-acceptor) domain GD606_12245 PF00072 Response regulator receiver domain GD606_12245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12250 PF09308 LuxQ, periplasmic GD606_12250 PF00512 His Kinase A (phospho-acceptor) domain GD606_12250 PF00072 Response regulator receiver domain GD606_12250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12255 PF00512 His Kinase A (phospho-acceptor) domain GD606_12255 PF01627 Hpt domain GD606_12255 PF00672 HAMP domain GD606_12255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_12255 PF00072 Response regulator receiver domain GD606_12270 PF03814 Potassium-transporting ATPase A subunit GD606_12280 PF02669 K+-transporting ATPase, c chain GD606_12285 PF02702 Osmosensitive K+ channel His kinase sensor domain GD606_12285 PF13493 Domain of unknown function (DUF4118) GD606_12285 PF13492 GAF domain GD606_12285 PF00512 His Kinase A (phospho-acceptor) domain GD606_12285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12290 PF00486 Transcriptional regulatory protein, C terminal GD606_12290 PF00072 Response regulator receiver domain GD606_12295 PF04055 Radical SAM superfamily GD606_12295 PF13186 Iron-sulfur cluster-binding domain GD606_12305 PF13520 Amino acid permease GD606_12310 PF00158 Sigma-54 interaction domain GD606_12310 PF00072 Response regulator receiver domain GD606_12310 PF02954 Bacterial regulatory protein, Fis family GD606_12315 PF00512 His Kinase A (phospho-acceptor) domain GD606_12315 PF08448 PAS fold GD606_12315 PF00072 Response regulator receiver domain GD606_12315 PF13188 PAS domain GD606_12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12320 PF00120 Glutamine synthetase, catalytic domain GD606_12335 PF00528 Binding-protein-dependent transport system inner membrane component GD606_12340 PF00528 Binding-protein-dependent transport system inner membrane component GD606_12345 PF00005 ABC transporter GD606_12345 PF08402 TOBE domain GD606_12350 PF17912 MalK OB fold domain GD606_12350 PF00005 ABC transporter GD606_12355 PF06463 Molybdenum Cofactor Synthesis C GD606_12355 PF04055 Radical SAM superfamily GD606_12360 PF00384 Molybdopterin oxidoreductase GD606_12360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GD606_12360 PF01568 Molydopterin dinucleotide binding domain GD606_12365 PF09308 LuxQ, periplasmic GD606_12365 PF00072 Response regulator receiver domain GD606_12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12365 PF00512 His Kinase A (phospho-acceptor) domain GD606_12370 PF00696 Amino acid kinase family GD606_12370 PF01472 PUA domain GD606_12385 PF02954 Bacterial regulatory protein, Fis family GD606_12385 PF00072 Response regulator receiver domain GD606_12385 PF00158 Sigma-54 interaction domain GD606_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12390 PF08448 PAS fold GD606_12390 PF08447 PAS fold GD606_12400 PF00158 Sigma-54 interaction domain GD606_12400 PF02954 Bacterial regulatory protein, Fis family GD606_12400 PF00072 Response regulator receiver domain GD606_12415 PF08447 PAS fold GD606_12415 PF08448 PAS fold GD606_12415 PF00563 EAL domain GD606_12415 PF00990 Diguanylate cyclase, GGDEF domain GD606_12440 PF13458 Periplasmic binding protein GD606_12445 PF02653 Branched-chain amino acid transport system / permease component GD606_12450 PF11862 Domain of unknown function (DUF3382) GD606_12450 PF02653 Branched-chain amino acid transport system / permease component GD606_12455 PF12399 Branched-chain amino acid ATP-binding cassette transporter GD606_12455 PF00005 ABC transporter GD606_12460 PF00005 ABC transporter GD606_12465 PF01743 Poly A polymerase head domain GD606_12465 PF00571 CBS domain GD606_12470 PF00270 DEAD/DEAH box helicase GD606_12470 PF09369 Domain of unknown function (DUF1998) GD606_12470 PF00271 Helicase conserved C-terminal domain GD606_12485 PF01131 DNA topoisomerase GD606_12485 PF01751 Toprim domain GD606_12485 PF01396 Topoisomerase DNA binding C4 zinc finger GD606_12510 PF02654 Cobalamin-5-phosphate synthase GD606_12520 PF02540 NAD synthase GD606_12520 PF00958 GMP synthase C terminal domain GD606_12520 PF00117 Glutamine amidotransferase class-I GD606_12525 PF01053 Cys/Met metabolism PLP-dependent enzyme GD606_12535 PF00860 Permease family GD606_12545 PF00512 His Kinase A (phospho-acceptor) domain GD606_12545 PF01627 Hpt domain GD606_12545 PF00072 Response regulator receiver domain GD606_12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_12570 PF00672 HAMP domain GD606_12570 PF12729 Four helix bundle sensory module for signal transduction GD606_12585 PF00970 Oxidoreductase FAD-binding domain GD606_12585 PF00175 Oxidoreductase NAD-binding domain GD606_12585 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GD606_12590 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_12590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GD606_12600 PF00528 Binding-protein-dependent transport system inner membrane component GD606_12605 PF00528 Binding-protein-dependent transport system inner membrane component GD606_12610 PF13638 PIN domain GD606_12610 PF02562 PhoH-like protein GD606_12615 PF02254 TrkA-N domain GD606_12615 PF00999 Sodium/hydrogen exchanger family GD606_12630 PF13188 PAS domain GD606_12630 PF00512 His Kinase A (phospho-acceptor) domain GD606_12630 PF00072 Response regulator receiver domain GD606_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12630 PF08448 PAS fold GD606_12635 PF00072 Response regulator receiver domain GD606_12635 PF00196 Bacterial regulatory proteins, luxR family GD606_12645 PF01618 MotA/TolQ/ExbB proton channel family GD606_12650 PF02472 Biopolymer transport protein ExbD/TolR GD606_12660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GD606_12660 PF05221 S-adenosyl-L-homocysteine hydrolase GD606_12665 PF02772 S-adenosylmethionine synthetase, central domain GD606_12665 PF00438 S-adenosylmethionine synthetase, N-terminal domain GD606_12665 PF02773 S-adenosylmethionine synthetase, C-terminal domain GD606_12670 PF02569 Pantoate-beta-alanine ligase GD606_12675 PF01416 tRNA pseudouridine synthase GD606_12700 PF01895 PhoU domain GD606_12705 PF00005 ABC transporter GD606_12710 PF16736 Single Cache-like GD606_12710 PF00512 His Kinase A (phospho-acceptor) domain GD606_12710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12710 PF00989 PAS fold GD606_12715 PF00486 Transcriptional regulatory protein, C terminal GD606_12715 PF00072 Response regulator receiver domain GD606_12720 PF13458 Periplasmic binding protein GD606_12725 PF00989 PAS fold GD606_12725 PF18698 Histidine kinase sensor domain GD606_12725 PF00512 His Kinase A (phospho-acceptor) domain GD606_12725 PF00672 HAMP domain GD606_12725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12735 PF02085 Class III cytochrome C family GD606_12740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_12745 PF01890 Cobalamin synthesis G C-terminus GD606_12745 PF11761 Cobalamin biosynthesis central region GD606_12745 PF11760 Cobalamin synthesis G N-terminal GD606_12750 PF02403 Seryl-tRNA synthetase N-terminal domain GD606_12750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GD606_12755 PF02464 Competence-damaged protein GD606_12755 PF18146 Damage-inducible protein CinA KH domain GD606_12755 PF00994 Probable molybdopterin binding domain GD606_12760 PF13614 AAA domain GD606_12800 PF13247 4Fe-4S dicluster domain GD606_12815 PF01758 Sodium Bile acid symporter family GD606_12820 PF04143 Sulphur transport GD606_12845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GD606_12850 PF01678 Diaminopimelate epimerase GD606_12875 PF01627 Hpt domain GD606_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12875 PF00072 Response regulator receiver domain GD606_12875 PF00512 His Kinase A (phospho-acceptor) domain GD606_12895 PF01264 Chorismate synthase GD606_12900 PF00551 Formyl transferase GD606_12905 PF02602 Uroporphyrinogen-III synthase HemD GD606_12905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_12925 PF08299 Bacterial dnaA protein helix-turn-helix GD606_12925 PF00308 Bacterial dnaA protein GD606_12925 PF11638 DnaA N-terminal domain GD606_12935 PF00204 DNA gyrase B GD606_12935 PF00986 DNA gyrase B subunit, carboxyl terminus GD606_12935 PF18053 DNA gyrase B subunit insert domain GD606_12935 PF01751 Toprim domain GD606_12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_12940 PF00521 DNA gyrase/topoisomerase IV, subunit A GD606_12940 PF03989 DNA gyrase C-terminal domain, beta-propeller GD606_12950 PF04127 DNA / pantothenate metabolism flavoprotein GD606_12950 PF02441 Flavoprotein GD606_12960 PF01370 NAD dependent epimerase/dehydratase family GD606_12970 PF13614 AAA domain GD606_12980 PF17762 HTH domain found in ParB protein GD606_12980 PF02195 ParB-like nuclease domain GD606_12985 PF00294 pfkB family carbohydrate kinase GD606_12985 PF01467 Cytidylyltransferase-like GD606_12990 PF01740 STAS domain GD606_12995 PF02405 Permease MlaE GD606_13000 PF00005 ABC transporter GD606_13005 PF02470 MlaD protein GD606_13015 PF09350 Domain of unknown function (DUF1992) GD606_13025 PF00175 Oxidoreductase NAD-binding domain GD606_13025 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GD606_13040 PF00920 Dehydratase family GD606_13055 PF02386 Cation transport protein GD606_13060 PF02080 TrkA-C domain GD606_13060 PF02254 TrkA-N domain GD606_13065 PF01926 50S ribosome-binding GTPase GD606_13065 PF01018 GTP1/OBG GD606_13070 PF04055 Radical SAM superfamily GD606_13075 PF01502 Phosphoribosyl-AMP cyclohydrolase GD606_13080 PF08029 HisG, C-terminal domain GD606_13080 PF01634 ATP phosphoribosyltransferase GD606_13085 PF01926 50S ribosome-binding GTPase GD606_13085 PF07650 KH domain GD606_13090 PF01168 Alanine racemase, N-terminal domain GD606_13100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GD606_13110 PF00813 FliP family GD606_13115 PF01313 Bacterial export proteins, family 3 GD606_13120 PF12627 Probable RNA and SrmB- binding site of polymerase A GD606_13120 PF01743 Poly A polymerase head domain GD606_13120 PF01966 HD domain GD606_13125 PF01979 Amidohydrolase family GD606_13130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GD606_13130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GD606_13135 PF01029 NusB family GD606_13135 PF01189 16S rRNA methyltransferase RsmB/F GD606_13145 PF00551 Formyl transferase GD606_13145 PF02911 Formyl transferase, C-terminal domain GD606_13150 PF01327 Polypeptide deformylase GD606_13155 PF02938 GAD domain GD606_13155 PF01336 OB-fold nucleic acid binding domain GD606_13155 PF00152 tRNA synthetases class II (D, K and N) GD606_13160 PF13393 Histidyl-tRNA synthetase GD606_13160 PF03129 Anticodon binding domain GD606_13185 PF13426 PAS domain GD606_13185 PF07568 Histidine kinase GD606_13185 PF13581 Histidine kinase-like ATPase domain GD606_13200 PF00119 ATP synthase A chain GD606_13205 PF00137 ATP synthase subunit C GD606_13210 PF02629 CoA binding domain GD606_13210 PF06971 Putative DNA-binding protein N-terminus GD606_13220 PF01501 Glycosyl transferase family 8 GD606_13220 PF00535 Glycosyl transferase family 2 GD606_13230 PF00535 Glycosyl transferase family 2 GD606_13250 PF00535 Glycosyl transferase family 2 GD606_13305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GD606_13305 PF02811 PHP domain GD606_13305 PF07733 Bacterial DNA polymerase III alpha NTPase domain GD606_13305 PF14579 Helix-hairpin-helix motif GD606_13310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GD606_13310 PF00391 PEP-utilising enzyme, mobile domain GD606_13315 PF07722 Peptidase C26 GD606_13320 PF12804 MobA-like NTP transferase domain GD606_13345 PF06463 Molybdenum Cofactor Synthesis C GD606_13345 PF04055 Radical SAM superfamily GD606_13350 PF00072 Response regulator receiver domain GD606_13360 PF00072 Response regulator receiver domain GD606_13360 PF01627 Hpt domain GD606_13360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_13360 PF00672 HAMP domain GD606_13360 PF00512 His Kinase A (phospho-acceptor) domain GD606_13360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_13375 PF00465 Iron-containing alcohol dehydrogenase GD606_13380 PF00563 EAL domain GD606_13380 PF00990 Diguanylate cyclase, GGDEF domain GD606_13380 PF03707 Bacterial signalling protein N terminal repeat GD606_13400 PF01145 SPFH domain / Band 7 family GD606_13405 PF01145 SPFH domain / Band 7 family GD606_13405 PF12221 Bacterial membrane protein N terminal GD606_13410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GD606_13410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GD606_13410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GD606_13410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GD606_13425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_13430 PF12704 MacB-like periplasmic core domain GD606_13430 PF02687 FtsX-like permease family GD606_13430 PF00005 ABC transporter GD606_13435 PF02687 FtsX-like permease family GD606_13435 PF12704 MacB-like periplasmic core domain GD606_13435 PF00005 ABC transporter GD606_13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_13445 PF00512 His Kinase A (phospho-acceptor) domain GD606_13450 PF05958 tRNA (Uracil-5-)-methyltransferase GD606_13450 PF01938 TRAM domain GD606_13465 PF02481 DNA recombination-mediator protein A GD606_13465 PF17782 DprA winged helix domain GD606_13480 PF00990 Diguanylate cyclase, GGDEF domain GD606_13480 PF07694 5TMR of 5TMR-LYT GD606_13485 PF02899 Phage integrase, N-terminal SAM-like domain GD606_13485 PF00589 Phage integrase family GD606_13510 PF00206 Lyase GD606_13510 PF10397 Adenylosuccinate lyase C-terminus GD606_13515 PF00156 Phosphoribosyl transferase domain GD606_13540 PF13186 Iron-sulfur cluster-binding domain GD606_13540 PF04055 Radical SAM superfamily GD606_13545 PF00528 Binding-protein-dependent transport system inner membrane component GD606_13550 PF00528 Binding-protein-dependent transport system inner membrane component GD606_13555 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD606_13560 PF00005 ABC transporter GD606_13565 PF14306 PUA-like domain GD606_13565 PF01747 ATP-sulfurylase GD606_13570 PF01979 Amidohydrolase family GD606_13600 PF00571 CBS domain GD606_13605 PF00107 Zinc-binding dehydrogenase GD606_13605 PF08240 Alcohol dehydrogenase GroES-like domain GD606_13615 PF05973 Phage derived protein Gp49-like (DUF891) GD606_13620 PF00690 Cation transporter/ATPase, N-terminus GD606_13620 PF00689 Cation transporting ATPase, C-terminus GD606_13625 PF01475 Ferric uptake regulator family GD606_13635 PF03773 Predicted permease GD606_13640 PF01791 DeoC/LacD family aldolase GD606_13650 PF04542 Sigma-70 region 2 GD606_13650 PF08281 Sigma-70, region 4 GD606_13675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GD606_13675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GD606_13690 PF02954 Bacterial regulatory protein, Fis family GD606_13690 PF00158 Sigma-54 interaction domain GD606_13690 PF13185 GAF domain GD606_13695 PF00690 Cation transporter/ATPase, N-terminus GD606_13695 PF00689 Cation transporting ATPase, C-terminus GD606_13710 PF00005 ABC transporter GD606_13790 PF00005 ABC transporter GD606_13795 PF12704 MacB-like periplasmic core domain GD606_13795 PF02687 FtsX-like permease family GD606_13795 PF00005 ABC transporter GD606_13800 PF00155 Aminotransferase class I and II GD606_13820 PF00535 Glycosyl transferase family 2 GD606_13835 PF01894 Uncharacterised protein family UPF0047 GD606_13855 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GD606_13855 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GD606_13865 PF01381 Helix-turn-helix GD606_13875 PF00202 Aminotransferase class-III GD606_13885 PF00011 Hsp20/alpha crystallin family GD606_13895 PF01367 5'-3' exonuclease, C-terminal SAM fold GD606_13895 PF09281 Taq polymerase, exonuclease GD606_13895 PF00476 DNA polymerase family A GD606_13895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GD606_13925 PF00005 ABC transporter GD606_13930 PF02653 Branched-chain amino acid transport system / permease component GD606_13935 PF11975 Family 4 glycosyl hydrolase C-terminal domain GD606_13935 PF02056 Family 4 glycosyl hydrolase GD606_13940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_13940 PF00672 HAMP domain GD606_13940 PF02743 Cache domain GD606_13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_13945 PF00512 His Kinase A (phospho-acceptor) domain GD606_13945 PF00989 PAS fold GD606_13955 PF00034 Cytochrome c GD606_13960 PF11849 Domain of unknown function (DUF3369) GD606_13975 PF00563 EAL domain GD606_13975 PF03707 Bacterial signalling protein N terminal repeat GD606_13975 PF00990 Diguanylate cyclase, GGDEF domain GD606_13980 PF00563 EAL domain GD606_13980 PF08668 HDOD domain GD606_14010 PF10458 Valyl tRNA synthetase tRNA binding arm GD606_14010 PF00133 tRNA synthetases class I (I, L, M and V) GD606_14010 PF08264 Anticodon-binding domain of tRNA GD606_14025 PF00571 CBS domain GD606_14030 PF07228 Stage II sporulation protein E (SpoIIE) GD606_14030 PF13426 PAS domain GD606_14040 PF00378 Enoyl-CoA hydratase/isomerase GD606_14055 PF04029 2-phosphosulpholactate phosphatase GD606_14060 PF11871 Domain of unknown function (DUF3391) GD606_14060 PF01966 HD domain GD606_14070 PF00072 Response regulator receiver domain GD606_14070 PF09308 LuxQ, periplasmic GD606_14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_14070 PF00512 His Kinase A (phospho-acceptor) domain GD606_14200 PF02272 DHHA1 domain GD606_14200 PF01411 tRNA synthetases class II (A) GD606_14200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GD606_14205 PF00154 recA bacterial DNA recombination protein GD606_14215 PF02355 Protein export membrane protein GD606_14215 PF07549 SecD/SecF GG Motif GD606_14220 PF00902 Sec-independent protein translocase protein (TatC) GD606_14235 PF12833 Helix-turn-helix domain GD606_14235 PF02311 AraC-like ligand binding domain GD606_14255 PF03109 ABC1 family GD606_14265 PF01565 FAD binding domain GD606_14265 PF02913 FAD linked oxidases, C-terminal domain GD606_14270 PF01668 SmpB protein GD606_14275 PF05524 PEP-utilising enzyme, N-terminal GD606_14275 PF02896 PEP-utilising enzyme, TIM barrel domain GD606_14275 PF00391 PEP-utilising enzyme, mobile domain GD606_14280 PF00381 PTS HPr component phosphorylation site GD606_14335 PF03358 NADPH-dependent FMN reductase GD606_14345 PF01613 Flavin reductase like domain GD606_14350 PF00881 Nitroreductase family GD606_14355 PF01638 HxlR-like helix-turn-helix GD606_14360 PF08448 PAS fold GD606_14360 PF00990 Diguanylate cyclase, GGDEF domain GD606_14375 PF03063 Prismane/CO dehydrogenase family GD606_14390 PF00027 Cyclic nucleotide-binding domain GD606_14390 PF13545 Crp-like helix-turn-helix domain GD606_14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_14395 PF00512 His Kinase A (phospho-acceptor) domain GD606_14395 PF00072 Response regulator receiver domain GD606_14395 PF09308 LuxQ, periplasmic GD606_14400 PF00072 Response regulator receiver domain GD606_14405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GD606_14405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GD606_14430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GD606_14430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GD606_14430 PF00374 Nickel-dependent hydrogenase GD606_14440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GD606_14450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GD606_14450 PF00361 Proton-conducting membrane transporter GD606_14450 PF13244 Domain of unknown function (DUF4040) GD606_14455 PF00166 Chaperonin 10 Kd subunit GD606_14460 PF00118 TCP-1/cpn60 chaperonin family GD606_14465 PF01569 PAP2 superfamily GD606_14475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GD606_14475 PF00155 Aminotransferase class I and II GD606_14475 PF07685 CobB/CobQ-like glutamine amidotransferase domain GD606_14485 PF05443 ROS/MUCR transcriptional regulator protein GD606_14495 PF07859 alpha/beta hydrolase fold GD606_14510 PF00005 ABC transporter GD606_14510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GD606_14515 PF00005 ABC transporter GD606_14515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GD606_14520 PF08681 Protein of unknown function (DUF1778) GD606_14530 PF01926 50S ribosome-binding GTPase GD606_14530 PF13167 GTP-binding GTPase N-terminal GD606_14530 PF16360 GTP-binding GTPase Middle Region GD606_14535 PF02142 MGS-like domain GD606_14535 PF01808 AICARFT/IMPCHase bienzyme GD606_14545 PF00460 Flagella basal body rod protein GD606_14550 PF00460 Flagella basal body rod protein GD606_14550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_14555 PF02049 Flagellar hook-basal body complex protein FliE GD606_14560 PF08345 Flagellar M-ring protein C-terminal GD606_14560 PF01514 Secretory protein of YscJ/FliF family GD606_14565 PF14841 FliG middle domain GD606_14565 PF01706 FliG C-terminal domain GD606_14565 PF14842 FliG N-terminal domain GD606_14575 PF18269 T3SS EscN ATPase C-terminal domain GD606_14575 PF02874 ATP synthase alpha/beta family, beta-barrel domain GD606_14575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GD606_14590 PF00563 EAL domain GD606_14590 PF01590 GAF domain GD606_14590 PF00990 Diguanylate cyclase, GGDEF domain GD606_14590 PF00360 Phytochrome region GD606_14595 PF01925 Sulfite exporter TauE/SafE GD606_14615 PF00004 ATPase family associated with various cellular activities (AAA) GD606_14615 PF02190 ATP-dependent protease La (LON) substrate-binding domain GD606_14615 PF05362 Lon protease (S16) C-terminal proteolytic domain GD606_14620 PF13188 PAS domain GD606_14620 PF00512 His Kinase A (phospho-acceptor) domain GD606_14620 PF08448 PAS fold GD606_14620 PF00072 Response regulator receiver domain GD606_14620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_14625 PF00072 Response regulator receiver domain GD606_14625 PF00158 Sigma-54 interaction domain GD606_14625 PF02954 Bacterial regulatory protein, Fis family GD606_14635 PF03061 Thioesterase superfamily GD606_14650 PF00899 ThiF family GD606_14670 PF01888 CbiD GD606_14675 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GD606_14675 PF07685 CobB/CobQ-like glutamine amidotransferase domain GD606_14680 PF07943 Penicillin-binding protein 5, C-terminal domain GD606_14680 PF00768 D-alanyl-D-alanine carboxypeptidase GD606_14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_14685 PF18698 Histidine kinase sensor domain GD606_14685 PF00512 His Kinase A (phospho-acceptor) domain GD606_14685 PF00672 HAMP domain GD606_14685 PF00989 PAS fold GD606_14710 PF13193 AMP-binding enzyme C-terminal domain GD606_14710 PF00501 AMP-binding enzyme GD606_14710 PF16177 Acetyl-coenzyme A synthetase N-terminus GD606_14715 PF04397 LytTr DNA-binding domain GD606_14715 PF00072 Response regulator receiver domain GD606_14720 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GD606_14725 PF00437 Type II/IV secretion system protein GD606_14730 PF00437 Type II/IV secretion system protein GD606_14755 PF00263 Bacterial type II and III secretion system protein GD606_14755 PF03958 Bacterial type II/III secretion system short domain GD606_14765 PF00437 Type II/IV secretion system protein GD606_14775 PF00482 Type II secretion system (T2SS), protein F GD606_14785 PF07963 Prokaryotic N-terminal methylation motif GD606_14815 PF01464 Transglycosylase SLT domain GD606_14830 PF00072 Response regulator receiver domain GD606_14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_14865 PF13276 HTH-like domain GD606_14865 PF13683 Integrase core domain GD606_14870 PF01527 Transposase GD606_14890 PF01554 MatE GD606_14930 PF13439 Glycosyltransferase Family 4 GD606_14930 PF00534 Glycosyl transferases group 1 GD606_14935 PF00534 Glycosyl transferases group 1 GD606_14935 PF13439 Glycosyltransferase Family 4 GD606_14940 PF02397 Bacterial sugar transferase GD606_14950 PF14870 Photosynthesis system II assembly factor YCF48 GD606_14965 PF03023 Lipid II flippase MurJ GD606_14985 PF13439 Glycosyltransferase Family 4 GD606_14985 PF00534 Glycosyl transferases group 1 GD606_14990 PF00733 Asparagine synthase GD606_14990 PF13537 Glutamine amidotransferase domain GD606_14995 PF01435 Peptidase family M48 GD606_15020 PF01343 Peptidase family S49 GD606_15030 PF00171 Aldehyde dehydrogenase family GD606_15035 PF00679 Elongation factor G C-terminus GD606_15035 PF00009 Elongation factor Tu GTP binding domain GD606_15035 PF03144 Elongation factor Tu domain 2 GD606_15035 PF06421 GTP-binding protein LepA C-terminus GD606_15040 PF10502 Signal peptidase, peptidase S26 GD606_15045 PF13335 Magnesium chelatase, subunit ChlI C-terminal GD606_15045 PF01078 Magnesium chelatase, subunit ChlI GD606_15050 PF05598 Transposase domain (DUF772) GD606_15050 PF01609 Transposase DDE domain GD606_15060 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_15060 PF00512 His Kinase A (phospho-acceptor) domain GD606_15060 PF00672 HAMP domain GD606_15060 PF01627 Hpt domain GD606_15060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_15060 PF00072 Response regulator receiver domain GD606_15065 PF01594 AI-2E family transporter GD606_15070 PF00892 EamA-like transporter family GD606_15080 PF01741 Large-conductance mechanosensitive channel, MscL GD606_15100 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_15100 PF00672 HAMP domain GD606_15100 PF00072 Response regulator receiver domain GD606_15100 PF00512 His Kinase A (phospho-acceptor) domain GD606_15100 PF01627 Hpt domain GD606_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_15115 PF00512 His Kinase A (phospho-acceptor) domain GD606_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_15115 PF00072 Response regulator receiver domain GD606_15115 PF09308 LuxQ, periplasmic GD606_15120 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD606_15120 PF01464 Transglycosylase SLT domain GD606_15125 PF12729 Four helix bundle sensory module for signal transduction GD606_15125 PF00672 HAMP domain GD606_15125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_15130 PF06180 Cobalt chelatase (CbiK) GD606_15135 PF18075 FtsX extracellular domain GD606_15135 PF02687 FtsX-like permease family GD606_15140 PF00005 ABC transporter GD606_15145 PF03477 ATP cone domain GD606_15145 PF02867 Ribonucleotide reductase, barrel domain GD606_15145 PF00317 Ribonucleotide reductase, all-alpha domain GD606_15160 PF00672 HAMP domain GD606_15160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_15160 PF00072 Response regulator receiver domain GD606_15160 PF01627 Hpt domain GD606_15160 PF00512 His Kinase A (phospho-acceptor) domain GD606_15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_15165 PF00072 Response regulator receiver domain GD606_15165 PF01627 Hpt domain GD606_15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_15165 PF00512 His Kinase A (phospho-acceptor) domain GD606_15175 PF00155 Aminotransferase class I and II GD606_15190 PF00330 Aconitase family (aconitate hydratase) GD606_15205 PF13597 Anaerobic ribonucleoside-triphosphate reductase GD606_15205 PF03477 ATP cone domain GD606_15215 PF05193 Peptidase M16 inactive domain GD606_15215 PF00675 Insulinase (Peptidase family M16) GD606_15220 PF01661 Macro domain GD606_15225 PF00227 Proteasome subunit GD606_15230 PF00004 ATPase family associated with various cellular activities (AAA) GD606_15230 PF07724 AAA domain (Cdc48 subfamily) GD606_15235 PF00696 Amino acid kinase family GD606_15240 PF00156 Phosphoribosyl transferase domain GD606_15255 PF00072 Response regulator receiver domain GD606_15255 PF00486 Transcriptional regulatory protein, C terminal GD606_15265 PF07977 FabA-like domain GD606_15275 PF07244 Surface antigen variable number repeat GD606_15275 PF01103 Surface antigen GD606_15280 PF00005 ABC transporter GD606_15285 PF12704 MacB-like periplasmic core domain GD606_15285 PF02687 FtsX-like permease family GD606_15290 PF01336 OB-fold nucleic acid binding domain GD606_15290 PF00152 tRNA synthetases class II (D, K and N) GD606_15350 PF05069 Phage virion morphogenesis family GD606_15365 PF10124 Mu-like prophage major head subunit gpT GD606_15385 PF06074 Protein of unknown function (DUF935) GD606_15390 PF03237 Terminase-like family GD606_15395 PF11985 Protein of unknown function (DUF3486) GD606_15575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_15575 PF13426 PAS domain GD606_15575 PF00672 HAMP domain GD606_15580 PF01814 Hemerythrin HHE cation binding domain GD606_15600 PF08264 Anticodon-binding domain of tRNA GD606_15600 PF00133 tRNA synthetases class I (I, L, M and V) GD606_15600 PF13603 Leucyl-tRNA synthetase, Domain 2 GD606_15605 PF00144 Beta-lactamase GD606_15610 PF01029 NusB family GD606_15615 PF00885 6,7-dimethyl-8-ribityllumazine synthase GD606_15620 PF00925 GTP cyclohydrolase II GD606_15620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GD606_15625 PF00677 Lumazine binding domain GD606_15630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GD606_15630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GD606_15635 PF16199 Radical_SAM C-terminal domain GD606_15635 PF04055 Radical SAM superfamily GD606_15655 PF03717 Penicillin-binding Protein dimerisation domain GD606_15655 PF00905 Penicillin binding protein transpeptidase domain GD606_15660 PF01098 Cell cycle protein GD606_15675 PF00430 ATP synthase B/B' CF(0) GD606_15680 PF00213 ATP synthase delta (OSCP) subunit GD606_15685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GD606_15685 PF02874 ATP synthase alpha/beta family, beta-barrel domain GD606_15685 PF00306 ATP synthase alpha/beta chain, C terminal domain GD606_15690 PF00231 ATP synthase GD606_15695 PF02874 ATP synthase alpha/beta family, beta-barrel domain GD606_15695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GD606_15700 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GD606_15700 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GD606_15710 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GD606_15710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GD606_15715 PF14602 Hexapeptide repeat of succinyl-transferase GD606_15715 PF12804 MobA-like NTP transferase domain GD606_15715 PF00132 Bacterial transferase hexapeptide (six repeats) GD606_15735 PF00013 KH domain GD606_15735 PF01966 HD domain GD606_15735 PF12072 Domain of unknown function (DUF3552) GD606_15740 PF13277 YmdB-like protein GD606_15755 PF00579 tRNA synthetases class I (W and Y) GD606_15755 PF01479 S4 domain GD606_15760 PF01040 UbiA prenyltransferase family GD606_15775 PF00072 Response regulator receiver domain GD606_15775 PF00990 Diguanylate cyclase, GGDEF domain GD606_15780 PF00512 His Kinase A (phospho-acceptor) domain GD606_15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_15790 PF08534 Redoxin GD606_15800 PF06071 Protein of unknown function (DUF933) GD606_15800 PF01926 50S ribosome-binding GTPase GD606_15805 PF00990 Diguanylate cyclase, GGDEF domain GD606_15805 PF03707 Bacterial signalling protein N terminal repeat GD606_15805 PF00563 EAL domain GD606_15810 PF02570 Precorrin-8X methylmutase GD606_15815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GD606_15820 PF00528 Binding-protein-dependent transport system inner membrane component GD606_15825 PF00528 Binding-protein-dependent transport system inner membrane component GD606_15825 PF12911 N-terminal TM domain of oligopeptide transport permease C GD606_15830 PF12704 MacB-like periplasmic core domain GD606_15830 PF02687 FtsX-like permease family GD606_15830 PF00005 ABC transporter GD606_15835 PF00005 ABC transporter GD606_15840 PF01895 PhoU domain GD606_15850 PF01381 Helix-turn-helix GD606_15860 PF00290 Tryptophan synthase alpha chain GD606_15865 PF00291 Pyridoxal-phosphate dependent enzyme GD606_15870 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GD606_15875 PF00218 Indole-3-glycerol phosphate synthase GD606_15880 PF00591 Glycosyl transferase family, a/b domain GD606_15880 PF02885 Glycosyl transferase family, helical bundle domain GD606_15885 PF00117 Glutamine amidotransferase class-I GD606_15890 PF04715 Anthranilate synthase component I, N terminal region GD606_15890 PF00425 chorismate binding enzyme GD606_15895 PF02153 Prephenate dehydrogenase GD606_15895 PF01817 Chorismate mutase type II GD606_15900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GD606_15905 PF00800 Prephenate dehydratase GD606_15905 PF01842 ACT domain GD606_15905 PF01817 Chorismate mutase type II GD606_15910 PF01959 3-dehydroquinate synthase II GD606_15915 PF01791 DeoC/LacD family aldolase GD606_15920 PF13187 4Fe-4S dicluster domain GD606_15920 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit GD606_15925 PF00890 FAD binding domain GD606_15975 PF03441 FAD binding domain of DNA photolyase GD606_15975 PF00875 DNA photolyase GD606_15985 PF00271 Helicase conserved C-terminal domain GD606_15985 PF00270 DEAD/DEAH box helicase GD606_16005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_16005 PF03819 MazG nucleotide pyrophosphohydrolase domain GD606_16015 PF06689 ClpX C4-type zinc finger GD606_16015 PF10431 C-terminal, D2-small domain, of ClpB protein GD606_16015 PF07724 AAA domain (Cdc48 subfamily) GD606_16025 PF00528 Binding-protein-dependent transport system inner membrane component GD606_16040 PF00005 ABC transporter GD606_16045 PF00528 Binding-protein-dependent transport system inner membrane component GD606_16055 PF12849 PBP superfamily domain GD606_16060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_16065 PF00005 ABC transporter GD606_16065 PF02687 FtsX-like permease family GD606_16065 PF12704 MacB-like periplasmic core domain GD606_16075 PF00534 Glycosyl transferases group 1 GD606_16075 PF13439 Glycosyltransferase Family 4 GD606_16090 PF01202 Shikimate kinase GD606_16100 PF00085 Thioredoxin GD606_16105 PF00881 Nitroreductase family GD606_16115 PF13237 4Fe-4S dicluster domain GD606_16145 PF00069 Protein kinase domain GD606_16145 PF03793 PASTA domain GD606_16165 PF00570 HRDC domain GD606_16165 PF13361 UvrD-like helicase C-terminal domain GD606_16170 PF00994 Probable molybdopterin binding domain GD606_16175 PF00483 Nucleotidyl transferase GD606_16185 PF00210 Ferritin-like domain GD606_16190 PF00199 Catalase GD606_16190 PF06628 Catalase-related immune-responsive GD606_16205 PF05711 Macrocin-O-methyltransferase (TylF) GD606_16220 PF11871 Domain of unknown function (DUF3391) GD606_16220 PF01966 HD domain GD606_16230 PF12705 PD-(D/E)XK nuclease superfamily GD606_16230 PF00580 UvrD/REP helicase N-terminal domain GD606_16230 PF13361 UvrD-like helicase C-terminal domain GD606_16235 PF00849 RNA pseudouridylate synthase GD606_16245 PF00512 His Kinase A (phospho-acceptor) domain GD606_16245 PF18698 Histidine kinase sensor domain GD606_16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_16245 PF00672 HAMP domain GD606_16245 PF00989 PAS fold GD606_16255 PF00672 HAMP domain GD606_16255 PF12729 Four helix bundle sensory module for signal transduction GD606_16255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_16270 PF00072 Response regulator receiver domain GD606_16270 PF00512 His Kinase A (phospho-acceptor) domain GD606_16270 PF01627 Hpt domain GD606_16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_16280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GD606_16280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GD606_16285 PF05973 Phage derived protein Gp49-like (DUF891) GD606_16295 PF07690 Major Facilitator Superfamily GD606_16300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD606_16300 PF00529 HlyD membrane-fusion protein of T1SS GD606_16305 PF12802 MarR family GD606_16310 PF01171 PP-loop family GD606_16320 PF00072 Response regulator receiver domain GD606_16320 PF00486 Transcriptional regulatory protein, C terminal GD606_16325 PF02163 Peptidase family M50 GD606_16330 PF00579 tRNA synthetases class I (W and Y) GD606_16365 PF00072 Response regulator receiver domain GD606_16365 PF00196 Bacterial regulatory proteins, luxR family GD606_16370 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD606_16375 PF02223 Thymidylate kinase GD606_16380 PF01336 OB-fold nucleic acid binding domain GD606_16380 PF01966 HD domain GD606_16385 PF01975 Survival protein SurE GD606_16390 PF00360 Phytochrome region GD606_16390 PF00990 Diguanylate cyclase, GGDEF domain GD606_16390 PF01590 GAF domain GD606_16390 PF00563 EAL domain GD606_16400 PF03471 Transporter associated domain GD606_16400 PF01595 Cyclin M transmembrane N-terminal domain GD606_16400 PF00571 CBS domain GD606_16405 PF01618 MotA/TolQ/ExbB proton channel family GD606_16415 PF01016 Ribosomal L27 protein GD606_16420 PF00829 Ribosomal prokaryotic L21 protein GD606_16425 PF11897 Protein of unknown function (DUF3417) GD606_16425 PF00343 Carbohydrate phosphorylase GD606_16430 PF00009 Elongation factor Tu GTP binding domain GD606_16430 PF03144 Elongation factor Tu domain 2 GD606_16430 PF16658 Class II release factor RF3, C-terminal domain GD606_16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD606_16440 PF03466 LysR substrate binding domain GD606_16445 PF00830 Ribosomal L28 family GD606_16455 PF01783 Ribosomal L32p protein family GD606_16460 PF02504 Fatty acid synthesis protein GD606_16465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GD606_16465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GD606_16475 PF00550 Phosphopantetheine attachment site GD606_16480 PF00109 Beta-ketoacyl synthase, N-terminal domain GD606_16480 PF02801 Beta-ketoacyl synthase, C-terminal domain GD606_16485 PF00464 Serine hydroxymethyltransferase GD606_16490 PF00072 Response regulator receiver domain GD606_16490 PF00990 Diguanylate cyclase, GGDEF domain GD606_16510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GD606_16515 PF01872 RibD C-terminal domain GD606_16515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GD606_16550 PF00990 Diguanylate cyclase, GGDEF domain GD606_16550 PF00072 Response regulator receiver domain GD606_16555 PF00672 HAMP domain GD606_16555 PF00072 Response regulator receiver domain GD606_16555 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_16555 PF00512 His Kinase A (phospho-acceptor) domain GD606_16555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_16555 PF01627 Hpt domain GD606_16570 PF02589 LUD domain GD606_16570 PF11870 Domain of unknown function (DUF3390) GD606_16570 PF13183 4Fe-4S dicluster domain GD606_16575 PF02589 LUD domain GD606_16580 PF02652 L-lactate permease GD606_16585 PF07085 DRTGG domain GD606_16590 PF13607 Succinyl-CoA ligase like flavodoxin domain GD606_16590 PF13380 CoA binding domain GD606_16590 PF00583 Acetyltransferase (GNAT) family GD606_16595 PF02754 Cysteine-rich domain GD606_16600 PF01565 FAD binding domain GD606_16600 PF02913 FAD linked oxidases, C-terminal domain GD606_16605 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ GD606_16615 PF02954 Bacterial regulatory protein, Fis family GD606_16615 PF00072 Response regulator receiver domain GD606_16615 PF00158 Sigma-54 interaction domain GD606_16620 PF00072 Response regulator receiver domain GD606_16620 PF00512 His Kinase A (phospho-acceptor) domain GD606_16620 PF13188 PAS domain GD606_16620 PF08448 PAS fold GD606_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_16625 PF01070 FMN-dependent dehydrogenase GD606_16640 PF00072 Response regulator receiver domain GD606_16640 PF00196 Bacterial regulatory proteins, luxR family GD606_16645 PF07730 Histidine kinase GD606_16645 PF17200 Single Cache domain 2 GD606_16670 PF01037 Lrp/AsnC ligand binding domain GD606_16675 PF00171 Aldehyde dehydrogenase family GD606_16680 PF02586 SOS response associated peptidase (SRAP) GD606_16700 PF04012 PspA/IM30 family GD606_16705 PF02954 Bacterial regulatory protein, Fis family GD606_16705 PF00158 Sigma-54 interaction domain GD606_16710 PF16363 GDP-mannose 4,6 dehydratase GD606_16720 PF01476 LysM domain GD606_16720 PF05257 CHAP domain GD606_16725 PF03062 MBOAT, membrane-bound O-acyltransferase family GD606_16735 PF05145 Transition state regulatory protein AbrB GD606_16745 PF13282 Domain of unknown function (DUF4070) GD606_16745 PF02310 B12 binding domain GD606_16745 PF04055 Radical SAM superfamily GD606_16765 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_16765 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GD606_16770 PF02082 Transcriptional regulator GD606_16775 PF01654 Cytochrome bd terminal oxidase subunit I GD606_16780 PF02322 Cytochrome bd terminal oxidase subunit II GD606_16795 PF03315 Serine dehydratase beta chain GD606_16795 PF03313 Serine dehydratase alpha chain GD606_16805 PF01384 Phosphate transporter family GD606_16815 PF00512 His Kinase A (phospho-acceptor) domain GD606_16815 PF00672 HAMP domain GD606_16815 PF13426 PAS domain GD606_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_16825 PF00512 His Kinase A (phospho-acceptor) domain GD606_16825 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_16825 PF01627 Hpt domain GD606_16825 PF00672 HAMP domain GD606_16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_16825 PF00072 Response regulator receiver domain GD606_16840 PF13416 Bacterial extracellular solute-binding protein GD606_16845 PF08402 TOBE domain GD606_16845 PF00005 ABC transporter GD606_16850 PF00528 Binding-protein-dependent transport system inner membrane component GD606_16855 PF00528 Binding-protein-dependent transport system inner membrane component GD606_16865 PF01134 Glucose inhibited division protein A GD606_16870 PF03358 NADPH-dependent FMN reductase GD606_16880 PF01476 LysM domain GD606_16880 PF01551 Peptidase family M23 GD606_16880 PF08525 Opacity-associated protein A N-terminal motif GD606_16885 PF01584 CheW-like domain GD606_16885 PF00072 Response regulator receiver domain GD606_16890 PF00005 ABC transporter GD606_16890 PF00664 ABC transporter transmembrane region GD606_16890 PF00664 ABC transporter transmembrane region GD606_16890 PF00005 ABC transporter GD606_16900 PF01475 Ferric uptake regulator family GD606_16910 PF12464 Maltose acetyltransferase GD606_16910 PF00132 Bacterial transferase hexapeptide (six repeats) GD606_16925 PF02543 Carbamoyltransferase N-terminus GD606_16925 PF16861 Carbamoyltransferase C-terminus GD606_16955 PF14492 Elongation Factor G, domain II GD606_16955 PF03764 Elongation factor G, domain IV GD606_16955 PF00679 Elongation factor G C-terminus GD606_16955 PF00009 Elongation factor Tu GTP binding domain GD606_16955 PF03144 Elongation factor Tu domain 2 GD606_16960 PF01047 MarR family GD606_16970 PF01584 CheW-like domain GD606_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_16980 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_16980 PF01627 Hpt domain GD606_16980 PF01584 CheW-like domain GD606_16985 PF00486 Transcriptional regulatory protein, C terminal GD606_16985 PF00072 Response regulator receiver domain GD606_16990 PF13380 CoA binding domain GD606_16990 PF13607 Succinyl-CoA ligase like flavodoxin domain GD606_16990 PF00583 Acetyltransferase (GNAT) family GD606_16995 PF01145 SPFH domain / Band 7 family GD606_17010 PF00224 Pyruvate kinase, barrel domain GD606_17010 PF02887 Pyruvate kinase, alpha/beta domain GD606_17020 PF02774 Semialdehyde dehydrogenase, dimerisation domain GD606_17020 PF01118 Semialdehyde dehydrogenase, NAD binding domain GD606_17025 PF14535 AMP-binding enzyme C-terminal domain GD606_17025 PF00501 AMP-binding enzyme GD606_17050 PF02335 Cytochrome c552 GD606_17055 PF03264 NapC/NirT cytochrome c family, N-terminal region GD606_17075 PF00581 Rhodanese-like domain GD606_17075 PF00753 Metallo-beta-lactamase superfamily GD606_17080 PF10417 C-terminal domain of 1-Cys peroxiredoxin GD606_17080 PF00578 AhpC/TSA family GD606_17085 PF00578 AhpC/TSA family GD606_17085 PF10417 C-terminal domain of 1-Cys peroxiredoxin GD606_17090 PF00578 AhpC/TSA family GD606_17090 PF10417 C-terminal domain of 1-Cys peroxiredoxin GD606_17105 PF12419 SNF2 Helicase protein GD606_17105 PF00271 Helicase conserved C-terminal domain GD606_17105 PF00176 SNF2 family N-terminal domain GD606_17110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GD606_17115 PF04607 Region found in RelA / SpoT proteins GD606_17115 PF13291 ACT domain GD606_17115 PF02824 TGS domain GD606_17130 PF00582 Universal stress protein family GD606_17155 PF00365 Phosphofructokinase GD606_17160 PF02277 Phosphoribosyltransferase GD606_17170 PF06472 ABC transporter transmembrane region 2 GD606_17170 PF00005 ABC transporter GD606_17175 PF00403 Heavy-metal-associated domain GD606_17180 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GD606_17180 PF03900 Porphobilinogen deaminase, C-terminal domain GD606_17190 PF13580 SIS domain GD606_17215 PF00072 Response regulator receiver domain GD606_17215 PF02954 Bacterial regulatory protein, Fis family GD606_17215 PF00158 Sigma-54 interaction domain GD606_17220 PF00459 Inositol monophosphatase family GD606_17235 PF00595 PDZ domain GD606_17235 PF13180 PDZ domain GD606_17245 PF03966 Trm112p-like protein GD606_17260 PF14579 Helix-hairpin-helix motif GD606_17260 PF02811 PHP domain GD606_17260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GD606_17260 PF07733 Bacterial DNA polymerase III alpha NTPase domain GD606_17270 PF02954 Bacterial regulatory protein, Fis family GD606_17270 PF00072 Response regulator receiver domain GD606_17270 PF00158 Sigma-54 interaction domain GD606_17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_17275 PF00512 His Kinase A (phospho-acceptor) domain GD606_17290 PF01106 NifU-like domain GD606_17295 PF00749 tRNA synthetases class I (E and Q), catalytic domain GD606_17315 PF00892 EamA-like transporter family GD606_17325 PF01627 Hpt domain GD606_17325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD606_17325 PF00512 His Kinase A (phospho-acceptor) domain GD606_17325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_17325 PF00672 HAMP domain GD606_17325 PF00072 Response regulator receiver domain GD606_17335 PF00850 Histone deacetylase domain GD606_17340 PF00202 Aminotransferase class-III GD606_17345 PF00692 dUTPase GD606_17365 PF08206 Ribonuclease B OB domain GD606_17365 PF00575 S1 RNA binding domain GD606_17365 PF17876 Cold shock domain GD606_17365 PF00773 RNB domain GD606_17365 PF08461 Ribonuclease R winged-helix domain GD606_17375 PF00072 Response regulator receiver domain GD606_17375 PF00486 Transcriptional regulatory protein, C terminal GD606_17380 PF00512 His Kinase A (phospho-acceptor) domain GD606_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_17380 PF00672 HAMP domain GD606_17415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GD606_17415 PF01568 Molydopterin dinucleotide binding domain GD606_17415 PF10518 TAT (twin-arginine translocation) pathway signal sequence GD606_17415 PF00384 Molybdopterin oxidoreductase GD606_17420 PF13247 4Fe-4S dicluster domain GD606_17420 PF14711 Respiratory nitrate reductase beta C-terminal GD606_17420 PF13247 4Fe-4S dicluster domain GD606_17420 PF14711 Respiratory nitrate reductase beta C-terminal GD606_17440 PF02254 TrkA-N domain GD606_17440 PF00999 Sodium/hydrogen exchanger family GD606_17440 PF02080 TrkA-C domain GD606_17450 PF00543 Nitrogen regulatory protein P-II GD606_17455 PF00909 Ammonium Transporter Family GD606_17460 PF03951 Glutamine synthetase, beta-Grasp domain GD606_17460 PF00120 Glutamine synthetase, catalytic domain GD606_17465 PF12704 MacB-like periplasmic core domain GD606_17465 PF02687 FtsX-like permease family GD606_17465 PF00005 ABC transporter GD606_17475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_17480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_17495 PF00465 Iron-containing alcohol dehydrogenase GD606_17520 PF01842 ACT domain GD606_17520 PF00551 Formyl transferase GD606_17555 PF00664 ABC transporter transmembrane region GD606_17555 PF00005 ABC transporter GD606_17555 PF03412 Peptidase C39 family GD606_17560 PF02954 Bacterial regulatory protein, Fis family GD606_17560 PF00072 Response regulator receiver domain GD606_17560 PF00158 Sigma-54 interaction domain GD606_17585 PF02754 Cysteine-rich domain GD606_17610 PF01883 Iron-sulfur cluster assembly protein GD606_17610 PF10609 NUBPL iron-transfer P-loop NTPase GD606_17625 PF06490 Flagellar regulatory protein FleQ GD606_17625 PF02954 Bacterial regulatory protein, Fis family GD606_17625 PF00158 Sigma-54 interaction domain GD606_17635 PF10609 NUBPL iron-transfer P-loop NTPase GD606_17635 PF01883 Iron-sulfur cluster assembly protein GD606_17640 PF10609 NUBPL iron-transfer P-loop NTPase GD606_17715 PF00563 EAL domain GD606_17715 PF00990 Diguanylate cyclase, GGDEF domain GD606_17715 PF08447 PAS fold GD606_17715 PF08448 PAS fold GD606_17720 PF00701 Dihydrodipicolinate synthetase family GD606_17725 PF00005 ABC transporter GD606_17735 PF03652 Holliday junction resolvase GD606_17740 PF02618 YceG-like family GD606_17755 PF01895 PhoU domain GD606_17800 PF00158 Sigma-54 interaction domain GD606_17800 PF00072 Response regulator receiver domain GD606_17800 PF02954 Bacterial regulatory protein, Fis family GD606_17815 PF03958 Bacterial type II/III secretion system short domain GD606_17815 PF00263 Bacterial type II and III secretion system protein GD606_17830 PF00437 Type II/IV secretion system protein GD606_17850 PF00881 Nitroreductase family GD606_17855 PF00753 Metallo-beta-lactamase superfamily GD606_17880 PF00128 Alpha amylase, catalytic domain GD606_17880 PF16657 Maltogenic Amylase, C-terminal domain GD606_17885 PF02463 RecF/RecN/SMC N terminal domain GD606_17900 PF00773 RNB domain GD606_17900 PF00575 S1 RNA binding domain GD606_17900 PF08206 Ribonuclease B OB domain GD606_17915 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GD606_17915 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GD606_17920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD606_17925 PF00005 ABC transporter GD606_17930 PF00528 Binding-protein-dependent transport system inner membrane component GD606_17940 PF00384 Molybdopterin oxidoreductase GD606_17940 PF01568 Molydopterin dinucleotide binding domain GD606_17950 PF00258 Flavodoxin GD606_17960 PF08267 Cobalamin-independent synthase, N-terminal domain GD606_17960 PF01717 Cobalamin-independent synthase, Catalytic domain GD606_17975 PF12833 Helix-turn-helix domain GD606_17980 PF00403 Heavy-metal-associated domain GD606_17985 PF00005 ABC transporter GD606_17990 PF03306 Alpha-acetolactate decarboxylase GD606_18000 PF01522 Polysaccharide deacetylase GD606_18025 PF02954 Bacterial regulatory protein, Fis family GD606_18025 PF00158 Sigma-54 interaction domain GD606_18035 PF00534 Glycosyl transferases group 1 GD606_18035 PF13439 Glycosyltransferase Family 4 GD606_18040 PF00534 Glycosyl transferases group 1 GD606_18040 PF13439 Glycosyltransferase Family 4 GD606_18050 PF05973 Phage derived protein Gp49-like (DUF891) GD606_18055 PF01381 Helix-turn-helix GD606_18060 PF01627 Hpt domain GD606_18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_18060 PF00989 PAS fold GD606_18060 PF00072 Response regulator receiver domain GD606_18060 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD606_18060 PF00512 His Kinase A (phospho-acceptor) domain GD606_18080 PF01047 MarR family GD606_18090 PF00672 HAMP domain GD606_18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_18110 PF00072 Response regulator receiver domain GD606_18110 PF00486 Transcriptional regulatory protein, C terminal GD606_18115 PF00909 Ammonium Transporter Family GD606_18120 PF00543 Nitrogen regulatory protein P-II GD606_18125 PF08335 GlnD PII-uridylyltransferase GD606_18125 PF01909 Nucleotidyltransferase domain GD606_18125 PF01966 HD domain GD606_18140 PF00578 AhpC/TSA family GD606_18140 PF10417 C-terminal domain of 1-Cys peroxiredoxin GD606_18160 PF00905 Penicillin binding protein transpeptidase domain GD606_18160 PF00912 Transglycosylase GD606_18165 PF01209 ubiE/COQ5 methyltransferase family GD606_18185 PF01351 Ribonuclease HII GD606_18190 PF01245 Ribosomal protein L19 GD606_18195 PF01746 tRNA (Guanine-1)-methyltransferase GD606_18195 PF09936 SAM-dependent RNA methyltransferase GD606_18200 PF01782 RimM N-terminal domain GD606_18200 PF05239 PRC-barrel domain GD606_18210 PF00886 Ribosomal protein S16 GD606_18215 PF00448 SRP54-type protein, GTPase domain GD606_18215 PF02978 Signal peptide binding domain GD606_18215 PF02881 SRP54-type protein, helical bundle domain GD606_18220 PF00155 Aminotransferase class I and II GD606_18225 PF01136 Peptidase family U32 GD606_18225 PF12392 Collagenase GD606_18235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD606_18235 PF00205 Thiamine pyrophosphate enzyme, central domain GD606_18235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD606_18240 PF05922 Peptidase inhibitor I9 GD606_18240 PF00082 Subtilase family GD606_18245 PF00580 UvrD/REP helicase N-terminal domain GD606_18245 PF13361 UvrD-like helicase C-terminal domain GD606_18275 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GD606_18285 PF00285 Citrate synthase, C-terminal domain GD606_18290 PF00263 Bacterial type II and III secretion system protein GD606_18290 PF03958 Bacterial type II/III secretion system short domain GD606_18295 PF00437 Type II/IV secretion system protein GD606_18315 PF01339 CheB methylesterase GD606_18315 PF00072 Response regulator receiver domain GD606_18325 PF01739 CheR methyltransferase, SAM binding domain GD606_18325 PF03705 CheR methyltransferase, all-alpha domain GD606_18330 PF13614 AAA domain GD606_18335 PF01584 CheW-like domain GD606_18340 PF00072 Response regulator receiver domain GD606_18345 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_18345 PF01627 Hpt domain GD606_18345 PF01584 CheW-like domain GD606_18345 PF00072 Response regulator receiver domain GD606_18385 PF13247 4Fe-4S dicluster domain GD606_18405 PF01965 DJ-1/PfpI family GD606_18415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD606_18425 PF00005 ABC transporter GD606_18430 PF01032 FecCD transport family GD606_18435 PF06180 Cobalt chelatase (CbiK) GD606_18445 PF09107 Elongation factor SelB, winged helix GD606_18445 PF00009 Elongation factor Tu GTP binding domain GD606_18445 PF03144 Elongation factor Tu domain 2 GD606_18445 PF09106 Elongation factor SelB, winged helix GD606_18450 PF02127 Aminopeptidase I zinc metalloprotease (M18) GD606_18455 PF12390 Selenocysteine synthase N terminal GD606_18455 PF03841 L-seryl-tRNA selenium transferase GD606_18460 PF01464 Transglycosylase SLT domain GD606_18465 PF00484 Carbonic anhydrase GD606_18480 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_18485 PF00512 His Kinase A (phospho-acceptor) domain GD606_18485 PF01627 Hpt domain GD606_18485 PF00072 Response regulator receiver domain GD606_18485 PF17149 Periplasmic sensor domain found in signal transduction proteins GD606_18485 PF00672 HAMP domain GD606_18495 PF09308 LuxQ, periplasmic GD606_18495 PF00072 Response regulator receiver domain GD606_18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_18495 PF00512 His Kinase A (phospho-acceptor) domain GD606_18515 PF13302 Acetyltransferase (GNAT) domain GD606_18530 PF03063 Prismane/CO dehydrogenase family GD606_18540 PF14759 Reductase C-terminal GD606_18540 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD606_18545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GD606_18560 PF04199 Putative cyclase GD606_18575 PF00482 Type II secretion system (T2SS), protein F GD606_18580 PF08334 Type II secretion system (T2SS), protein G GD606_18580 PF07963 Prokaryotic N-terminal methylation motif GD606_18630 PF00561 alpha/beta hydrolase fold GD606_18635 PF01476 LysM domain GD606_18635 PF03734 L,D-transpeptidase catalytic domain GD606_18640 PF06750 Bacterial Peptidase A24 N-terminal domain GD606_18640 PF01478 Type IV leader peptidase family GD606_18645 PF01750 Hydrogenase maturation protease GD606_18650 PF00374 Nickel-dependent hydrogenase GD606_18655 PF10518 TAT (twin-arginine translocation) pathway signal sequence GD606_18655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GD606_18655 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GD606_18670 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GD606_18670 PF17768 RecJ OB domain GD606_18670 PF02272 DHHA1 domain GD606_18670 PF01368 DHH family GD606_18705 PF00625 Guanylate kinase GD606_18710 PF04025 Domain of unknown function (DUF370) GD606_18715 PF08340 Domain of unknown function (DUF1732) GD606_18715 PF03755 YicC-like family, N-terminal region GD606_18725 PF04055 Radical SAM superfamily GD606_18725 PF00919 Uncharacterized protein family UPF0004 GD606_18735 PF05443 ROS/MUCR transcriptional regulator protein GD606_18745 PF02844 Phosphoribosylglycinamide synthetase, N domain GD606_18745 PF02843 Phosphoribosylglycinamide synthetase, C domain GD606_18745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GD606_18750 PF12729 Four helix bundle sensory module for signal transduction GD606_18750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_18750 PF00672 HAMP domain GD606_18760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_18760 PF02743 Cache domain GD606_18760 PF00672 HAMP domain GD606_18770 PF00133 tRNA synthetases class I (I, L, M and V) GD606_18770 PF01588 Putative tRNA binding domain GD606_18770 PF09334 tRNA synthetases class I (M) GD606_18775 PF04468 PSP1 C-terminal conserved region GD606_18785 PF00145 C-5 cytosine-specific DNA methylase GD606_18795 PF01555 DNA methylase GD606_18920 PF03237 Terminase-like family GD606_19045 PF00216 Bacterial DNA-binding protein GD606_19120 PF12161 HsdM N-terminal domain GD606_19120 PF02384 N-6 DNA Methylase GD606_19140 PF00069 Protein kinase domain GD606_19140 PF03793 PASTA domain GD606_19175 PF00872 Transposase, Mutator family GD606_19235 PF07724 AAA domain (Cdc48 subfamily) GD606_19235 PF00004 ATPase family associated with various cellular activities (AAA) GD606_19235 PF10431 C-terminal, D2-small domain, of ClpB protein GD606_19275 PF08406 CbbQ/NirQ/NorQ C-terminal GD606_19275 PF07728 AAA domain (dynein-related subfamily) GD606_19315 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system GD606_19320 PF00589 Phage integrase family GD606_19330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD606_19330 PF00205 Thiamine pyrophosphate enzyme, central domain GD606_19330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD606_19365 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system GD606_19370 PF17755 UvrA DNA-binding domain GD606_19370 PF17760 UvrA interaction domain GD606_19375 PF02579 Dinitrogenase iron-molybdenum cofactor GD606_19375 PF04055 Radical SAM superfamily GD606_19380 PF00148 Nitrogenase component 1 type Oxidoreductase GD606_19385 PF00148 Nitrogenase component 1 type Oxidoreductase GD606_19405 PF00148 Nitrogenase component 1 type Oxidoreductase GD606_19410 PF00148 Nitrogenase component 1 type Oxidoreductase GD606_19415 PF00543 Nitrogen regulatory protein P-II GD606_19420 PF00543 Nitrogen regulatory protein P-II GD606_19425 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family GD606_19430 PF01434 Peptidase family M41 GD606_19430 PF00004 ATPase family associated with various cellular activities (AAA) GD606_19430 PF17862 AAA+ lid domain GD606_19430 PF06480 FtsH Extracellular GD606_19435 PF00809 Pterin binding enzyme GD606_19440 PF02457 DisA bacterial checkpoint controller nucleotide-binding GD606_19450 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GD606_19455 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GD606_19460 PF02154 Flagellar motor switch protein FliM GD606_19460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GD606_19470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GD606_19470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GD606_19480 PF02653 Branched-chain amino acid transport system / permease component GD606_19485 PF02653 Branched-chain amino acid transport system / permease component GD606_19490 PF00005 ABC transporter GD606_19490 PF12399 Branched-chain amino acid ATP-binding cassette transporter GD606_19495 PF00005 ABC transporter GD606_19505 PF02637 GatB domain GD606_19505 PF02934 GatB/GatE catalytic domain GD606_19510 PF01008 Initiation factor 2 subunit family GD606_19520 PF01926 50S ribosome-binding GTPase GD606_19520 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GD606_19540 PF04608 Phosphatidylglycerophosphatase A GD606_19550 PF02954 Bacterial regulatory protein, Fis family GD606_19550 PF00072 Response regulator receiver domain GD606_19550 PF00158 Sigma-54 interaction domain GD606_19555 PF00465 Iron-containing alcohol dehydrogenase GD606_19560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD606_19560 PF17200 Single Cache domain 2 GD606_19560 PF00672 HAMP domain GD606_19565 PF01875 Memo-like protein GD606_19580 PF01584 CheW-like domain GD606_19580 PF07194 P2 response regulator binding domain GD606_19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_19580 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_19580 PF01627 Hpt domain GD606_19585 PF00072 Response regulator receiver domain GD606_19595 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GD606_19595 PF01138 3' exoribonuclease family, domain 1 GD606_19595 PF03725 3' exoribonuclease family, domain 2 GD606_19595 PF00575 S1 RNA binding domain GD606_19595 PF00013 KH domain GD606_19600 PF00312 Ribosomal protein S15 GD606_19605 PF01509 TruB family pseudouridylate synthase (N terminal domain) GD606_19605 PF16198 tRNA pseudouridylate synthase B C-terminal domain GD606_19615 PF02033 Ribosome-binding factor A GD606_19625 PF00009 Elongation factor Tu GTP binding domain GD606_19625 PF11987 Translation-initiation factor 2 GD606_19625 PF04760 Translation initiation factor IF-2, N-terminal region GD606_19635 PF13184 NusA-like KH domain GD606_19635 PF08529 NusA N-terminal domain GD606_19635 PF00575 S1 RNA binding domain GD606_19640 PF02576 RimP N-terminal domain GD606_19650 PF03448 MgtE intracellular N domain GD606_19650 PF01769 Divalent cation transporter GD606_19650 PF00571 CBS domain GD606_19660 PF05598 Transposase domain (DUF772) GD606_19660 PF01609 Transposase DDE domain GD606_19670 PF00460 Flagella basal body rod protein GD606_19670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_19675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_19675 PF00460 Flagella basal body rod protein GD606_19685 PF02107 Flagellar L-ring protein GD606_19690 PF02119 Flagellar P-ring protein GD606_19695 PF01476 LysM domain GD606_19695 PF08525 Opacity-associated protein A N-terminal motif GD606_19695 PF01551 Peptidase family M23 GD606_19705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_19705 PF00460 Flagella basal body rod protein GD606_19705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GD606_19705 PF00460 Flagella basal body rod protein GD606_19710 PF00700 Bacterial flagellin C-terminal helical region GD606_19710 PF00669 Bacterial flagellin N-terminal helical region GD606_19715 PF02599 Global regulator protein family GD606_19720 PF02623 FliW protein GD606_19735 PF01513 ATP-NAD kinase GD606_19790 PF01728 FtsJ-like methyltransferase GD606_19795 PF01709 Transcriptional regulator GD606_19800 PF02075 Crossover junction endodeoxyribonuclease RuvC GD606_19805 PF07499 RuvA, C-terminal domain GD606_19805 PF01330 RuvA N terminal domain GD606_19810 PF05491 RuvB C-terminal winged helix domain GD606_19810 PF05496 Holliday junction DNA helicase RuvB P-loop domain GD606_19810 PF17864 RuvB AAA lid domain GD606_19815 PF02511 Thymidylate synthase complementing protein GD606_19820 PF13614 AAA domain GD606_19835 PF00795 Carbon-nitrogen hydrolase GD606_19835 PF02540 NAD synthase GD606_19850 PF00535 Glycosyl transferase family 2 GD606_19855 PF00483 Nucleotidyl transferase GD606_19860 PF16363 GDP-mannose 4,6 dehydratase GD606_19865 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GD606_19870 PF08421 Putative zinc binding domain GD606_19870 PF08484 C-methyltransferase C-terminal domain GD606_19875 PF01370 NAD dependent epimerase/dehydratase family GD606_19895 PF01747 ATP-sulfurylase GD606_19895 PF14306 PUA-like domain GD606_19925 PF01527 Transposase GD606_19935 PF00005 ABC transporter GD606_19960 PF05045 Rhamnan synthesis protein F GD606_19960 PF14307 Glycosyltransferase WbsX GD606_19995 PF05598 Transposase domain (DUF772) GD606_19995 PF01609 Transposase DDE domain GD606_20000 PF02416 mttA/Hcf106 family GD606_20005 PF01507 Phosphoadenosine phosphosulfate reductase family GD606_20010 PF03975 CheD chemotactic sensory transduction GD606_20015 PF00072 Response regulator receiver domain GD606_20015 PF00486 Transcriptional regulatory protein, C terminal GD606_20020 PF01627 Hpt domain GD606_20020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD606_20020 PF02895 Signal transducing histidine kinase, homodimeric domain GD606_20020 PF09078 CheY binding GD606_20020 PF01584 CheW-like domain GD606_20030 PF02796 Helix-turn-helix domain of resolvase GD606_20030 PF00239 Resolvase, N terminal domain