locus-tag class description AB285_00010 PF02387 IncFII RepA protein family AB285_00045 PF00589 Phage integrase family AB285_00070 PF00565 Staphylococcal nuclease homologue AB285_00080 PF03230 Antirestriction protein AB285_00170 PF01464 Transglycosylase SLT domain AB285_00180 PF13700 Domain of unknown function (DUF4158) AB285_00180 PF01526 Tn3 transposase DDE domain AB285_00185 PF00239 Resolvase, N terminal domain AB285_00185 PF02796 Helix-turn-helix domain of resolvase AB285_00210 PF01051 Initiator Replication protein AB285_00220 PF18607 ParA helix turn helix domain AB285_00220 PF13614 AAA domain AB285_00225 PF08775 ParB family AB285_00225 PF02195 ParB-like nuclease domain AB285_00230 PF11799 impB/mucB/samB family C-terminal domain AB285_00230 PF00817 impB/mucB/samB family AB285_00230 PF13438 Domain of unknown function (DUF4113) AB285_00235 PF00717 Peptidase S24-like AB285_00240 PF13737 Transposase DDE domain AB285_00255 PF04754 Putative transposase, YhgA-like AB285_00260 PF02796 Helix-turn-helix domain of resolvase AB285_00260 PF00239 Resolvase, N terminal domain AB285_00265 PF13737 Transposase DDE domain AB285_00270 PF01526 Tn3 transposase DDE domain AB285_00270 PF13700 Domain of unknown function (DUF4158) AB285_00285 PF01695 IstB-like ATP binding protein AB285_00290 PF00665 Integrase core domain AB285_00290 PF02796 Helix-turn-helix domain of resolvase AB285_00300 PF00589 Phage integrase family AB285_00300 PF02899 Phage integrase, N-terminal SAM-like domain AB285_00310 PF02796 Helix-turn-helix domain of resolvase AB285_00310 PF00239 Resolvase, N terminal domain AB285_00325 PF03400 IS1 transposase AB285_00330 PF12759 InsA C-terminal domain AB285_00330 PF03811 InsA N-terminal domain AB285_00335 PF02371 Transposase IS116/IS110/IS902 family AB285_00335 PF01548 Transposase AB285_00340 PF00376 MerR family regulatory protein AB285_00340 PF09278 MerR, DNA binding AB285_00345 PF12324 Helix-turn-helix domain of alkylmercury lyase AB285_00345 PF03243 Alkylmercury lyase AB285_00350 PF13411 MerR HTH family regulatory protein AB285_00355 PF05052 MerE protein AB285_00360 PF00563 EAL domain AB285_00360 PF11809 Domain of unknown function (DUF3330) AB285_00365 PF02796 Helix-turn-helix domain of resolvase AB285_00365 PF00239 Resolvase, N terminal domain AB285_00385 PF13495 Phage integrase, N-terminal SAM-like domain AB285_00385 PF00589 Phage integrase family AB285_00390 PF13427 Domain of unknown function (DUF4111) AB285_00390 PF01909 Nucleotidyltransferase domain AB285_00395 PF00893 Small Multidrug Resistance protein AB285_00400 PF00809 Pterin binding enzyme AB285_00410 PF00665 Integrase core domain AB285_00410 PF01527 Transposase AB285_00410 PF13276 HTH-like domain AB285_00410 PF13333 Integrase core domain AB285_00415 PF01695 IstB-like ATP binding protein AB285_00420 PF00665 Integrase core domain AB285_00450 PF03743 Bacterial conjugation TrbI-like protein AB285_00470 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AB285_00485 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AB285_00495 PF04956 TrbC/VIRB2 family AB285_00500 PF00437 Type II/IV secretion system protein AB285_00505 PF00561 alpha/beta hydrolase fold AB285_00515 PF02534 Type IV secretory system Conjugative DNA transfer AB285_00520 PF01638 HxlR-like helix-turn-helix AB285_00525 PF02801 Beta-ketoacyl synthase, C-terminal domain AB285_00525 PF00109 Beta-ketoacyl synthase, N-terminal domain AB285_00535 PF07690 Major Facilitator Superfamily AB285_00540 PF00440 Bacterial regulatory proteins, tetR family AB285_00540 PF02909 Tetracyclin repressor-like, C-terminal domain AB285_00550 PF07690 Major Facilitator Superfamily AB285_00575 PF01526 Tn3 transposase DDE domain AB285_00575 PF13700 Domain of unknown function (DUF4158) AB285_00580 PF02371 Transposase IS116/IS110/IS902 family AB285_00580 PF01548 Transposase AB285_00615 PF02796 Helix-turn-helix domain of resolvase AB285_00615 PF00239 Resolvase, N terminal domain AB285_00620 PF01548 Transposase AB285_00620 PF02371 Transposase IS116/IS110/IS902 family AB285_00630 PF03400 IS1 transposase AB285_00635 PF03400 IS1 transposase AB285_00660 PF00589 Phage integrase family AB285_00670 PF06754 Phosphonate metabolism protein PhnG AB285_00675 PF07702 UTRA domain AB285_00675 PF00392 Bacterial regulatory proteins, gntR family AB285_00680 PF00528 Binding-protein-dependent transport system inner membrane component AB285_00690 PF00005 ABC transporter AB285_00695 PF06983 3-demethylubiquinone-9 3-methyltransferase AB285_00700 PF08274 PhnA Zinc-Ribbon AB285_00700 PF03831 PhnA domain AB285_00705 PF00350 Dynamin family AB285_00710 PF13990 YjcZ-like protein AB285_00715 PF03812 2-keto-3-deoxygluconate permease AB285_00720 PF00083 Sugar (and other) transporter AB285_00720 PF08946 Osmosensory transporter coiled coil AB285_00725 PF03824 High-affinity nickel-transport protein AB285_00750 PF09997 Predicted membrane protein (DUF2238) AB285_00775 PF11412 Disulphide bond corrector protein DsbC AB285_00775 PF02683 Cytochrome C biogenesis protein transmembrane region AB285_00780 PF03091 CutA1 divalent ion tolerance protein AB285_00785 PF03605 Anaerobic c4-dicarboxylate membrane transporter AB285_00790 PF10415 Fumarase C C-terminus AB285_00790 PF00206 Lyase AB285_00795 PF04186 FxsA cytoplasmic membrane protein AB285_00800 PF13520 Amino acid permease AB285_00805 PF00166 Chaperonin 10 Kd subunit AB285_00810 PF00118 TCP-1/cpn60 chaperonin family AB285_00815 PF01979 Amidohydrolase family AB285_00820 PF07670 Nucleoside recognition AB285_00825 PF07670 Nucleoside recognition AB285_00830 PF13698 Domain of unknown function (DUF4156) AB285_00835 PF04055 Radical SAM superfamily AB285_00840 PF01132 Elongation factor P (EF-P) OB domain AB285_00840 PF09285 Elongation factor P, C-terminal AB285_00840 PF08207 Elongation factor P (EF-P) KOW-like domain AB285_00845 PF08085 Entericidin EcnA/B family AB285_00850 PF08085 Entericidin EcnA/B family AB285_00855 PF00196 Bacterial regulatory proteins, luxR family AB285_00860 PF00893 Small Multidrug Resistance protein AB285_00865 PF08212 Lipocalin-like domain AB285_00870 PF00144 Beta-lactamase AB285_00875 PF03466 LysR substrate binding domain AB285_00875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_00880 PF02313 Fumarate reductase subunit D AB285_00885 PF02300 Fumarate reductase subunit C AB285_00890 PF13085 2Fe-2S iron-sulfur cluster binding domain AB285_00890 PF13183 4Fe-4S dicluster domain AB285_00895 PF00890 FAD binding domain AB285_00895 PF02910 Fumarate reductase flavoprotein C-term AB285_00900 PF00152 tRNA synthetases class II (D, K and N) AB285_00905 PF13520 Amino acid permease AB285_00915 PF02666 Phosphatidylserine decarboxylase AB285_00920 PF03193 RsgA GTPase AB285_00925 PF00929 Exonuclease AB285_00945 PF08331 Domain of unknown function (DUF1730) AB285_00950 PF01256 Carbohydrate kinase AB285_00950 PF03853 YjeF-related protein N-terminus AB285_00955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AB285_00960 PF01520 N-acetylmuramoyl-L-alanine amidase AB285_00965 PF08676 MutL C terminal dimerisation domain AB285_00965 PF01119 DNA mismatch repair protein, C-terminal domain AB285_00975 PF17209 Hfq protein AB285_00980 PF01926 50S ribosome-binding GTPase AB285_00980 PF13167 GTP-binding GTPase N-terminal AB285_00980 PF16360 GTP-binding GTPase Middle Region AB285_00985 PF01145 SPFH domain / Band 7 family AB285_00985 PF12221 Bacterial membrane protein N terminal AB285_00990 PF01145 SPFH domain / Band 7 family AB285_00995 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AB285_01000 PF00709 Adenylosuccinate synthetase AB285_01005 PF02082 Transcriptional regulator AB285_01010 PF17876 Cold shock domain AB285_01010 PF00575 S1 RNA binding domain AB285_01010 PF08461 Ribonuclease R winged-helix domain AB285_01010 PF00773 RNB domain AB285_01010 PF08206 Ribonuclease B OB domain AB285_01015 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB285_01015 PF00588 SpoU rRNA Methylase family AB285_01020 PF00083 Sugar (and other) transporter AB285_01020 PF08946 Osmosensory transporter coiled coil AB285_01025 PF02770 Acyl-CoA dehydrogenase, middle domain AB285_01025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB285_01025 PF18158 Adaptive response protein AidB N-terminal domain AB285_01030 PF00672 HAMP domain AB285_01030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_01030 PF02203 Tar ligand binding domain homologue AB285_01035 PF07338 Protein of unknown function (DUF1471) AB285_01040 PF07338 Protein of unknown function (DUF1471) AB285_01045 PF00326 Prolyl oligopeptidase family AB285_01050 PF00455 DeoR C terminal sensor domain AB285_01050 PF08220 DeoR-like helix-turn-helix domain AB285_01060 PF03611 PTS system sugar-specific permease component AB285_01065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_01070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_01075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB285_01080 PF01261 Xylose isomerase-like TIM barrel AB285_01085 PF00596 Class II Aldolase and Adducin N-terminal domain AB285_01090 PF07338 Protein of unknown function (DUF1471) AB285_01095 PF01250 Ribosomal protein S6 AB285_01100 PF00436 Single-strand binding protein family AB285_01105 PF01084 Ribosomal protein S18 AB285_01110 PF03948 Ribosomal protein L9, C-terminal domain AB285_01110 PF01281 Ribosomal protein L9, N-terminal domain AB285_01115 PF00892 EamA-like transporter family AB285_01120 PF08525 Opacity-associated protein A N-terminal motif AB285_01120 PF04225 Opacity-associated protein A LysM-like domain AB285_01125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB285_01125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB285_01130 PF00324 Amino acid permease AB285_01140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_01140 PF02203 Tar ligand binding domain homologue AB285_01140 PF00672 HAMP domain AB285_01145 PF00892 EamA-like transporter family AB285_01155 PF05368 NmrA-like family AB285_01160 PF01638 HxlR-like helix-turn-helix AB285_01165 PF00149 Calcineurin-like phosphoesterase AB285_01165 PF02872 5'-nucleotidase, C-terminal domain AB285_01170 PF00459 Inositol monophosphatase family AB285_01175 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AB285_01180 PF06526 Protein of unknown function (DUF1107) AB285_01185 PF00571 CBS domain AB285_01185 PF03471 Transporter associated domain AB285_01185 PF01595 Cyclin M transmembrane N-terminal domain AB285_01195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_01195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AB285_01205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AB285_01205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_01210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AB285_01210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_01215 PF00356 Bacterial regulatory proteins, lacI family AB285_01220 PF01625 Peptide methionine sulfoxide reductase AB285_01225 PF01103 Surface antigen AB285_01225 PF07244 Surface antigen variable number repeat AB285_01225 PF17243 POTRA domain TamA domain 1 AB285_01230 PF04357 TamB, inner membrane protein subunit of TAM complex AB285_01235 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AB285_01240 PF00719 Inorganic pyrophosphatase AB285_01245 PF13407 Periplasmic binding protein domain AB285_01250 PF00005 ABC transporter AB285_01255 PF02653 Branched-chain amino acid transport system / permease component AB285_01260 PF02653 Branched-chain amino acid transport system / permease component AB285_01265 PF02203 Tar ligand binding domain homologue AB285_01265 PF00672 HAMP domain AB285_01265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_01270 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AB285_01275 PF01225 Mur ligase family, catalytic domain AB285_01275 PF02875 Mur ligase family, glutamate ligase domain AB285_01275 PF08245 Mur ligase middle domain AB285_01280 PF04751 Protein of unknown function (DUF615) AB285_01285 PF01523 Putative modulator of DNA gyrase AB285_01290 PF07361 Cytochrome b562 AB285_01325 PF01979 Amidohydrolase family AB285_01330 PF03841 L-seryl-tRNA selenium transferase AB285_01335 PF07071 KDGP aldolase AB285_01345 PF05043 Mga helix-turn-helix domain AB285_01345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_01345 PF00874 PRD domain AB285_01345 PF08279 HTH domain AB285_01355 PF13597 Anaerobic ribonucleoside-triphosphate reductase AB285_01355 PF03477 ATP cone domain AB285_01360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_01360 PF02378 Phosphotransferase system, EIIC AB285_01360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_01365 PF01074 Glycosyl hydrolases family 38 N-terminal domain AB285_01365 PF07748 Glycosyl hydrolases family 38 C-terminal domain AB285_01365 PF09261 Alpha mannosidase middle domain AB285_01370 PF02378 Phosphotransferase system, EIIC AB285_01380 PF11941 Domain of unknown function (DUF3459) AB285_01380 PF00128 Alpha amylase, catalytic domain AB285_01385 PF02378 Phosphotransferase system, EIIC AB285_01385 PF00367 phosphotransferase system, EIIB AB285_01390 PF00356 Bacterial regulatory proteins, lacI family AB285_01395 PF00689 Cation transporting ATPase, C-terminus AB285_01395 PF00690 Cation transporter/ATPase, N-terminus AB285_01400 PF07691 PA14 domain AB285_01400 PF02838 Glycosyl hydrolase family 20, domain 2 AB285_01400 PF00728 Glycosyl hydrolase family 20, catalytic domain AB285_01405 PF18416 N-acetylglucosamine binding protein domain 2 AB285_01405 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AB285_01410 PF01042 Endoribonuclease L-PSP AB285_01415 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AB285_01415 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AB285_01420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB285_01420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB285_01425 PF02863 Arginine repressor, C-terminal domain AB285_01425 PF01316 Arginine repressor, DNA binding domain AB285_01430 PF03606 C4-dicarboxylate anaerobic carrier AB285_01435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB285_01435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB285_01440 PF00696 Amino acid kinase family AB285_01450 PF04074 YhcH/YjgK/YiaL AB285_01455 PF00701 Dihydrodipicolinate synthetase family AB285_01460 PF00920 Dehydratase family AB285_01470 PF04616 Glycosyl hydrolases family 43 AB285_01470 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AB285_01475 PF09339 IclR helix-turn-helix domain AB285_01475 PF01614 Bacterial transcriptional regulator AB285_01490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB285_01490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB285_01495 PF06877 Regulator of ribonuclease activity B AB285_01500 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AB285_01515 PF13356 Arm DNA-binding domain AB285_01515 PF00589 Phage integrase family AB285_01535 PF04606 Ogr/Delta-like zinc finger AB285_01575 PF17345 Family of unknown function (DUF5375) AB285_01615 PF00579 tRNA synthetases class I (W and Y) AB285_01625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB285_01630 PF00356 Bacterial regulatory proteins, lacI family AB285_01645 PF00561 alpha/beta hydrolase fold AB285_01660 PF07969 Amidohydrolase family AB285_01680 PF02954 Bacterial regulatory protein, Fis family AB285_01680 PF00158 Sigma-54 interaction domain AB285_01680 PF00072 Response regulator receiver domain AB285_01685 PF13426 PAS domain AB285_01685 PF08447 PAS fold AB285_01685 PF00512 His Kinase A (phospho-acceptor) domain AB285_01685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_01685 PF00989 PAS fold AB285_01685 PF13493 Domain of unknown function (DUF4118) AB285_01690 PF00072 Response regulator receiver domain AB285_01690 PF00196 Bacterial regulatory proteins, luxR family AB285_01695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB285_01700 PF00574 Clp protease AB285_01705 PF08007 Cupin superfamily protein AB285_01725 PF00593 TonB dependent receptor AB285_01725 PF07715 TonB-dependent Receptor Plug Domain AB285_01730 PF00155 Aminotransferase class I and II AB285_01730 PF00392 Bacterial regulatory proteins, gntR family AB285_01735 PF06568 Domain of unknown function (DUF1127) AB285_01740 PF00392 Bacterial regulatory proteins, gntR family AB285_01740 PF00155 Aminotransferase class I and II AB285_01745 PF02627 Carboxymuconolactone decarboxylase family AB285_01765 PF13533 Biotin-lipoyl like AB285_01775 PF04286 Protein of unknown function (DUF445) AB285_01790 PF00171 Aldehyde dehydrogenase family AB285_01805 PF08437 Glycosyl transferase family 8 C-terminal AB285_01805 PF01501 Glycosyl transferase family 8 AB285_01810 PF04932 O-Antigen ligase AB285_01815 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB285_01815 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB285_01820 PF04328 Selenoprotein, putative AB285_01825 PF02554 Carbon starvation protein CstA AB285_01825 PF13722 5TM C-terminal transporter carbon starvation CstA AB285_01830 PF08220 DeoR-like helix-turn-helix domain AB285_01835 PF01613 Flavin reductase like domain AB285_01840 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AB285_01840 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AB285_01850 PF07690 Major Facilitator Superfamily AB285_01855 PF03328 HpcH/HpaI aldolase/citrate lyase family AB285_01860 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB285_01865 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AB285_01870 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AB285_01875 PF00171 Aldehyde dehydrogenase family AB285_01880 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB285_01885 PF01047 MarR family AB285_01890 PF02203 Tar ligand binding domain homologue AB285_01890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_01890 PF00672 HAMP domain AB285_01895 PF00583 Acetyltransferase (GNAT) family AB285_01900 PF00884 Sulfatase AB285_01905 PF10696 Protein of unknown function (DUF2501) AB285_01910 PF01695 IstB-like ATP binding protein AB285_01915 PF17948 DnaT DNA-binding domain AB285_01920 PF02566 OsmC-like protein AB285_01925 PF01047 MarR family AB285_01930 PF12821 Threonine/Serine exporter, ThrE AB285_01935 PF06738 Putative threonine/serine exporter AB285_01940 PF00196 Bacterial regulatory proteins, luxR family AB285_01945 PF00196 Bacterial regulatory proteins, luxR family AB285_01950 PF04073 Aminoacyl-tRNA editing domain AB285_01955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_01955 PF02378 Phosphotransferase system, EIIC AB285_01960 PF11575 FhuF 2Fe-2S C-terminal domain AB285_01960 PF06276 Ferric iron reductase FhuF-like transporter AB285_01965 PF00990 Diguanylate cyclase, GGDEF domain AB285_01970 PF07256 Protein of unknown function (DUF1435) AB285_01990 PF05175 Methyltransferase small domain AB285_01990 PF08468 Methyltransferase small domain N-terminal AB285_01995 PF03603 DNA polymerase III psi subunit AB285_02000 PF00583 Acetyltransferase (GNAT) family AB285_02005 PF13419 Haloacid dehalogenase-like hydrolase AB285_02010 PF16658 Class II release factor RF3, C-terminal domain AB285_02010 PF00009 Elongation factor Tu GTP binding domain AB285_02010 PF03144 Elongation factor Tu domain 2 AB285_02015 PF04972 BON domain AB285_02020 PF07043 Protein of unknown function (DUF1328) AB285_02025 PF01734 Patatin-like phospholipase AB285_02030 PF01026 TatD related DNase AB285_02035 PF04055 Radical SAM superfamily AB285_02040 PF11230 Protein of unknown function (DUF3029) AB285_02045 PF01791 DeoC/LacD family aldolase AB285_02050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AB285_02050 PF00591 Glycosyl transferase family, a/b domain AB285_02050 PF02885 Glycosyl transferase family, helical bundle domain AB285_02055 PF01676 Metalloenzyme superfamily AB285_02060 PF01048 Phosphorylase superfamily AB285_02065 PF03099 Biotin/lipoate A/B protein ligase family AB285_02065 PF10437 Bacterial lipoate protein ligase C-terminus AB285_02070 PF10144 Bacterial virulence factor haemolysin AB285_02075 PF18429 Domain of unknown function (DUF5609) AB285_02080 PF18073 Rubredoxin metal binding domain AB285_02085 PF13521 AAA domain AB285_02085 PF01381 Helix-turn-helix AB285_02090 PF00107 Zinc-binding dehydrogenase AB285_02090 PF08240 Alcohol dehydrogenase GroES-like domain AB285_02095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_02095 PF03466 LysR substrate binding domain AB285_02100 PF00005 ABC transporter AB285_02100 PF12848 ABC transporter AB285_02105 PF01464 Transglycosylase SLT domain AB285_02105 PF14718 Soluble lytic murein transglycosylase L domain AB285_02110 PF01371 Trp repressor protein AB285_02115 PF01931 Protein of unknown function DUF84 AB285_02120 PF00300 Histidine phosphatase superfamily (branch 1) AB285_02125 PF06445 GyrI-like small molecule binding domain AB285_02125 PF12833 Helix-turn-helix domain AB285_02130 PF05981 CreA protein AB285_02135 PF00072 Response regulator receiver domain AB285_02135 PF00486 Transcriptional regulatory protein, C terminal AB285_02140 PF00588 SpoU rRNA Methylase family AB285_02145 PF00696 Amino acid kinase family AB285_02145 PF03447 Homoserine dehydrogenase, NAD binding domain AB285_02145 PF00742 Homoserine dehydrogenase AB285_02145 PF13840 ACT domain AB285_02145 PF01842 ACT domain AB285_02150 PF00288 GHMP kinases N terminal domain AB285_02150 PF08544 GHMP kinases C terminal AB285_02155 PF00291 Pyridoxal-phosphate dependent enzyme AB285_02155 PF14821 Threonine synthase N terminus AB285_02160 PF10697 Protein of unknown function (DUF2502) AB285_02165 PF03883 Peroxide stress protein YaaA AB285_02170 PF01235 Sodium:alanine symporter family AB285_02175 PF00923 Transaldolase/Fructose-6-phosphate aldolase AB285_02180 PF00994 Probable molybdopterin binding domain AB285_02185 PF07690 Major Facilitator Superfamily AB285_02190 PF01184 GPR1/FUN34/yaaH family AB285_02200 PF00012 Hsp70 protein AB285_02205 PF00226 DnaJ domain AB285_02205 PF01556 DnaJ C terminal domain AB285_02205 PF00684 DnaJ central domain AB285_02210 PF06965 Na+/H+ antiporter 1 AB285_02215 PF03466 LysR substrate binding domain AB285_02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_02220 PF01649 Ribosomal protein S20 AB285_02225 PF01687 Riboflavin kinase AB285_02225 PF06574 FAD synthetase AB285_02230 PF06827 Zinc finger found in FPG and IleRS AB285_02230 PF08264 Anticodon-binding domain of tRNA AB285_02230 PF00133 tRNA synthetases class I (I, L, M and V) AB285_02235 PF01252 Signal peptidase (SPase) II AB285_02240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB285_02245 PF02401 LytB protein AB285_02260 PF03613 PTS system mannose/fructose/sorbose family IID component AB285_02265 PF03609 PTS system sorbose-specific iic component AB285_02270 PF03830 PTS system sorbose subfamily IIB component AB285_02285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_02285 PF00356 Bacterial regulatory proteins, lacI family AB285_02290 PF05173 Dihydrodipicolinate reductase, C-terminus AB285_02290 PF01113 Dihydrodipicolinate reductase, N-terminus AB285_02295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AB285_02295 PF00117 Glutamine amidotransferase class-I AB285_02300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB285_02300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB285_02300 PF02142 MGS-like domain AB285_02305 PF06004 Bacterial protein of unknown function (DUF903) AB285_02310 PF03797 Autotransporter beta-domain AB285_02315 PF02525 Flavodoxin-like fold AB285_02320 PF02254 TrkA-N domain AB285_02320 PF00999 Sodium/hydrogen exchanger family AB285_02325 PF00186 Dihydrofolate reductase AB285_02330 PF00149 Calcineurin-like phosphoesterase AB285_02335 PF04379 ApaG domain AB285_02340 PF00398 Ribosomal RNA adenine dimethylase AB285_02345 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AB285_02350 PF09312 SurA N-terminal domain AB285_02350 PF00639 PPIC-type PPIASE domain AB285_02355 PF03968 OstA-like protein AB285_02355 PF04453 LPS transport system D AB285_02360 PF00226 DnaJ domain AB285_02360 PF05099 Tellurite resistance protein TerB AB285_02365 PF00849 RNA pseudouridylate synthase AB285_02370 PF12137 RNA polymerase recycling family C-terminal AB285_02370 PF18339 RapA N-terminal Tudor like domain 1 AB285_02370 PF00176 SNF2 family N-terminal domain AB285_02370 PF18337 RapA N-terminal Tudor like domain AB285_02370 PF00271 Helicase conserved C-terminal domain AB285_02375 PF00136 DNA polymerase family B AB285_02375 PF03104 DNA polymerase family B, exonuclease domain AB285_02380 PF00596 Class II Aldolase and Adducin N-terminal domain AB285_02385 PF02610 L-arabinose isomerase AB285_02385 PF11762 L-arabinose isomerase C-terminal domain AB285_02390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_02395 PF12833 Helix-turn-helix domain AB285_02395 PF02311 AraC-like ligand binding domain AB285_02400 PF09335 SNARE associated Golgi protein AB285_02405 PF00005 ABC transporter AB285_02410 PF00528 Binding-protein-dependent transport system inner membrane component AB285_02420 PF12793 Sugar transport-related sRNA regulator N-term AB285_02420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_02430 PF07690 Major Facilitator Superfamily AB285_02435 PF01848 Hok/gef family AB285_02440 PF00694 Aconitase C-terminal domain AB285_02445 PF00330 Aconitase family (aconitate hydratase) AB285_02450 PF00180 Isocitrate/isopropylmalate dehydrogenase AB285_02455 PF00682 HMGL-like AB285_02455 PF08502 LeuA allosteric (dimerisation) domain AB285_02460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_02460 PF03466 LysR substrate binding domain AB285_02465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_02465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_02465 PF00205 Thiamine pyrophosphate enzyme, central domain AB285_02470 PF10369 Small subunit of acetolactate synthase AB285_02475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_02475 PF00356 Bacterial regulatory proteins, lacI family AB285_02480 PF02381 MraZ protein, putative antitoxin-like AB285_02485 PF01795 MraW methylase family AB285_02490 PF04999 Cell division protein FtsL AB285_02495 PF03717 Penicillin-binding Protein dimerisation domain AB285_02495 PF00905 Penicillin binding protein transpeptidase domain AB285_02500 PF01225 Mur ligase family, catalytic domain AB285_02500 PF02875 Mur ligase family, glutamate ligase domain AB285_02500 PF08245 Mur ligase middle domain AB285_02505 PF01225 Mur ligase family, catalytic domain AB285_02505 PF08245 Mur ligase middle domain AB285_02505 PF02875 Mur ligase family, glutamate ligase domain AB285_02510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AB285_02510 PF00953 Glycosyl transferase family 4 AB285_02515 PF08245 Mur ligase middle domain AB285_02515 PF02875 Mur ligase family, glutamate ligase domain AB285_02520 PF01098 Cell cycle protein AB285_02525 PF04101 Glycosyltransferase family 28 C-terminal domain AB285_02525 PF03033 Glycosyltransferase family 28 N-terminal domain AB285_02530 PF08245 Mur ligase middle domain AB285_02530 PF02875 Mur ligase family, glutamate ligase domain AB285_02530 PF01225 Mur ligase family, catalytic domain AB285_02535 PF01820 D-ala D-ala ligase N-terminus AB285_02535 PF07478 D-ala D-ala ligase C-terminus AB285_02540 PF03799 Cell division protein FtsQ AB285_02540 PF08478 POTRA domain, FtsQ-type AB285_02545 PF02491 SHS2 domain inserted in FTSA AB285_02550 PF00091 Tubulin/FtsZ family, GTPase domain AB285_02550 PF12327 FtsZ family, C-terminal domain AB285_02555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AB285_02560 PF06558 Secretion monitor precursor protein (SecM) AB285_02565 PF07516 SecA Wing and Scaffold domain AB285_02565 PF01043 SecA preprotein cross-linking domain AB285_02565 PF07517 SecA DEAD-like domain AB285_02565 PF02810 SEC-C motif AB285_02570 PF00293 NUDIX domain AB285_02575 PF03884 DNA gyrase inhibitor YacG AB285_02580 PF07072 Cell division protein AB285_02585 PF01121 Dephospho-CoA kinase AB285_02590 PF00478 IMP dehydrogenase / GMP reductase domain AB285_02595 PF00482 Type II secretion system (T2SS), protein F AB285_02600 PF00437 Type II/IV secretion system protein AB285_02600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AB285_02605 PF07963 Prokaryotic N-terminal methylation motif AB285_02610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AB285_02610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AB285_02615 PF01510 N-acetylmuramoyl-L-alanine amidase AB285_02620 PF17113 Regulatory signalling modulator protein AmpE AB285_02625 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AB285_02625 PF04616 Glycosyl hydrolases family 43 AB285_02635 PF00324 Amino acid permease AB285_02645 PF07729 FCD domain AB285_02645 PF00392 Bacterial regulatory proteins, gntR family AB285_02650 PF17831 Pyruvate dehydrogenase E1 component middle domain AB285_02650 PF00456 Transketolase, thiamine diphosphate binding domain AB285_02655 PF02817 e3 binding domain AB285_02655 PF00364 Biotin-requiring enzyme AB285_02655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB285_02660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB285_02660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_02670 PF11737 Protein of unknown function (DUF3300) AB285_02675 PF00330 Aconitase family (aconitate hydratase) AB285_02675 PF06434 Aconitate hydratase 2 N-terminus AB285_02675 PF11791 Aconitate B N-terminal domain AB285_02680 PF06062 Uncharacterised protein family (UPF0231) AB285_02685 PF02675 S-adenosylmethionine decarboxylase AB285_02690 PF17284 Spermidine synthase tetramerisation domain AB285_02695 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AB285_02700 PF07732 Multicopper oxidase AB285_02700 PF07731 Multicopper oxidase AB285_02700 PF00394 Multicopper oxidase AB285_02705 PF01011 PQQ enzyme repeat AB285_02710 PF00156 Phosphoribosyl transferase domain AB285_02715 PF00484 Carbonic anhydrase AB285_02720 PF00005 ABC transporter AB285_02725 PF01061 ABC-2 type transporter AB285_02730 PF03610 PTS system fructose IIA component AB285_02735 PF01522 Polysaccharide deacetylase AB285_02755 PF00419 Fimbrial protein AB285_02760 PF13954 PapC N-terminal domain AB285_02760 PF00577 Outer membrane usher protein AB285_02760 PF13953 PapC C-terminal domain AB285_02765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_02765 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_02775 PF02261 Aspartate decarboxylase AB285_02780 PF02569 Pantoate-beta-alanine ligase AB285_02785 PF02548 Ketopantoate hydroxymethyltransferase AB285_02790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AB285_02795 PF12627 Probable RNA and SrmB- binding site of polymerase A AB285_02795 PF12626 Polymerase A arginine-rich C-terminus AB285_02795 PF01743 Poly A polymerase head domain AB285_02800 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB285_02805 PF01258 Prokaryotic dksA/traR C4-type zinc finger AB285_02810 PF03749 Sugar fermentation stimulation protein RE domain AB285_02810 PF17746 SfsA N-terminal OB domain AB285_02815 PF02834 LigT like Phosphoesterase AB285_02820 PF08482 ATP-dependent helicase C-terminal AB285_02820 PF00271 Helicase conserved C-terminal domain AB285_02820 PF04408 Helicase associated domain (HA2) AB285_02820 PF00270 DEAD/DEAH box helicase AB285_02825 PF14814 Bifunctional transglycosylase second domain AB285_02825 PF00912 Transglycosylase AB285_02825 PF00905 Penicillin binding protein transpeptidase domain AB285_02825 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AB285_02835 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_02835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_02840 PF13953 PapC C-terminal domain AB285_02840 PF13954 PapC N-terminal domain AB285_02840 PF00577 Outer membrane usher protein AB285_02850 PF00593 TonB dependent receptor AB285_02850 PF07715 TonB-dependent Receptor Plug Domain AB285_02855 PF00005 ABC transporter AB285_02860 PF01497 Periplasmic binding protein AB285_02865 PF01032 FecCD transport family AB285_02870 PF00202 Aminotransferase class-III AB285_02875 PF00654 Voltage gated chloride channel AB285_02880 PF01521 Iron-sulphur cluster biosynthesis AB285_02885 PF03458 UPF0126 domain AB285_02890 PF01497 Periplasmic binding protein AB285_02895 PF01048 Phosphorylase superfamily AB285_02900 PF13286 Phosphohydrolase-associated domain AB285_02900 PF01966 HD domain AB285_02905 PF00595 PDZ domain AB285_02910 PF05651 Putative sugar diacid recognition AB285_02910 PF17853 GGDEF-like domain AB285_02910 PF13556 PucR C-terminal helix-turn-helix domain AB285_02915 PF11944 Protein of unknown function (DUF3461) AB285_02920 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_02920 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AB285_02920 PF14602 Hexapeptide repeat of succinyl-transferase AB285_02925 PF01909 Nucleotidyltransferase domain AB285_02925 PF01966 HD domain AB285_02925 PF08335 GlnD PII-uridylyltransferase AB285_02925 PF01842 ACT domain AB285_02930 PF00557 Metallopeptidase family M24 AB285_02935 PF00318 Ribosomal protein S2 AB285_02940 PF00889 Elongation factor TS AB285_02945 PF00696 Amino acid kinase family AB285_02950 PF01765 Ribosome recycling factor AB285_02955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AB285_02955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AB285_02955 PF13288 DXP reductoisomerase C-terminal domain AB285_02960 PF01255 Putative undecaprenyl diphosphate synthase AB285_02970 PF17820 PDZ domain AB285_02970 PF02163 Peptidase family M50 AB285_02975 PF01103 Surface antigen AB285_02975 PF07244 Surface antigen variable number repeat AB285_02980 PF03938 Outer membrane protein (OmpH-like) AB285_02985 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_02985 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AB285_02990 PF07977 FabA-like domain AB285_02995 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_02995 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AB285_03000 PF02684 Lipid-A-disaccharide synthetase AB285_03005 PF01351 Ribonuclease HII AB285_03010 PF01336 OB-fold nucleic acid binding domain AB285_03010 PF14579 Helix-hairpin-helix motif AB285_03010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AB285_03010 PF02811 PHP domain AB285_03010 PF07733 Bacterial DNA polymerase III alpha NTPase domain AB285_03015 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AB285_03025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB285_03030 PF01171 PP-loop family AB285_03030 PF09179 TilS substrate binding domain AB285_03030 PF11734 TilS substrate C-terminal domain AB285_03035 PF07073 Modulator of Rho-dependent transcription termination (ROF) AB285_03040 PF06786 Uncharacterised protein family (UPF0253) AB285_03045 PF07152 YaeQ protein AB285_03050 PF00472 RF-1 domain AB285_03055 PF04170 NlpE N-terminal domain AB285_03055 PF17185 NlpE C-terminal OB domain AB285_03060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB285_03060 PF03129 Anticodon binding domain AB285_03060 PF04073 Aminoacyl-tRNA editing domain AB285_03065 PF01980 tRNA-methyltransferase O AB285_03065 PF18389 TrmO C-terminal domain AB285_03070 PF16358 RcsF lipoprotein AB285_03075 PF03180 NLPA lipoprotein AB285_03080 PF00528 Binding-protein-dependent transport system inner membrane component AB285_03085 PF09383 NIL domain AB285_03085 PF00005 ABC transporter AB285_03125 PF00248 Aldo/keto reductase family AB285_03130 PF03466 LysR substrate binding domain AB285_03130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_03135 PF07690 Major Facilitator Superfamily AB285_03140 PF03372 Endonuclease/Exonuclease/phosphatase family AB285_03145 PF08241 Methyltransferase domain AB285_03150 PF01464 Transglycosylase SLT domain AB285_03150 PF01476 LysM domain AB285_03155 PF16123 Hydroxyacylglutathione hydrolase C-terminus AB285_03155 PF00753 Metallo-beta-lactamase superfamily AB285_03160 PF08241 Methyltransferase domain AB285_03165 PF00075 RNase H AB285_03170 PF00929 Exonuclease AB285_03185 PF00005 ABC transporter AB285_03185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_03190 PF00005 ABC transporter AB285_03190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_03195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_03200 PF00528 Binding-protein-dependent transport system inner membrane component AB285_03215 PF00795 Carbon-nitrogen hydrolase AB285_03220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB285_03220 PF02770 Acyl-CoA dehydrogenase, middle domain AB285_03220 PF09317 Domain of unknown function (DUF1974) AB285_03220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB285_03225 PF13580 SIS domain AB285_03230 PF13230 Glutamine amidotransferases class-II AB285_03235 PF03734 L,D-transpeptidase catalytic domain AB285_03240 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AB285_03240 PF11973 NQRA C-terminal domain AB285_03245 PF03116 NQR2, RnfD, RnfE family AB285_03250 PF04205 FMN-binding domain AB285_03255 PF02508 Rnf-Nqr subunit, membrane protein AB285_03260 PF02508 Rnf-Nqr subunit, membrane protein AB285_03265 PF00970 Oxidoreductase FAD-binding domain AB285_03265 PF00175 Oxidoreductase NAD-binding domain AB285_03265 PF00111 2Fe-2S iron-sulfur cluster binding domain AB285_03270 PF04400 (Na+)-NQR maturation NqrM AB285_03275 PF00817 impB/mucB/samB family AB285_03275 PF11799 impB/mucB/samB family C-terminal domain AB285_03275 PF11798 IMS family HHH motif AB285_03280 PF07687 Peptidase dimerisation domain AB285_03280 PF01546 Peptidase family M20/M25/M40 AB285_03285 PF00156 Phosphoribosyl transferase domain AB285_03295 PF07417 Sigma factor-binding transcriptional regulator Crl AB285_03300 PF00267 Gram-negative porin AB285_03305 PF01472 PUA domain AB285_03305 PF00696 Amino acid kinase family AB285_03310 PF00171 Aldehyde dehydrogenase family AB285_03395 PF01609 Transposase DDE domain AB285_03395 PF05598 Transposase domain (DUF772) AB285_03410 PF00990 Diguanylate cyclase, GGDEF domain AB285_03415 PF01594 AI-2E family transporter AB285_03420 PF00324 Amino acid permease AB285_03425 PF02574 Homocysteine S-methyltransferase AB285_03430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB285_03435 PF00005 ABC transporter AB285_03440 PF00528 Binding-protein-dependent transport system inner membrane component AB285_03445 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AB285_03455 PF00490 Delta-aminolevulinic acid dehydratase AB285_03465 PF03797 Autotransporter beta-domain AB285_03470 PF15977 Winged helix-turn-helix DNA binding AB285_03475 PF00144 Beta-lactamase AB285_03480 PF05992 SbmA/BacA-like family AB285_03485 PF07759 Protein of unknown function (DUF1615) AB285_03490 PF10954 Protein of unknown function (DUF2755) AB285_03495 PF10953 Protein of unknown function (DUF2754) AB285_03500 PF01820 D-ala D-ala ligase N-terminus AB285_03500 PF07478 D-ala D-ala ligase C-terminus AB285_03510 PF07690 Major Facilitator Superfamily AB285_03515 PF10796 Sigma-S stabilisation anti-adaptor protein AB285_03520 PF07769 psiF repeat AB285_03530 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB285_03530 PF03807 NADP oxidoreductase coenzyme F420-dependent AB285_03535 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AB285_03540 PF01202 Shikimate kinase AB285_03545 PF16362 YaiA protein AB285_03550 PF07302 AroM protein AB285_03555 PF06865 Pyrimidine/purine nucleoside phosphorylase AB285_03560 PF04381 Putative exonuclease, RdgC AB285_03565 PF00480 ROK family AB285_03570 PF13476 AAA domain AB285_03575 PF00149 Calcineurin-like phosphoesterase AB285_03575 PF12320 Type 5 capsule protein repressor C-terminal domain AB285_03580 PF00486 Transcriptional regulatory protein, C terminal AB285_03580 PF00072 Response regulator receiver domain AB285_03585 PF11808 Phosphate regulon sensor protein PhoR AB285_03585 PF00989 PAS fold AB285_03585 PF00512 His Kinase A (phospho-acceptor) domain AB285_03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_03590 PF05525 Branched-chain amino acid transport protein AB285_03595 PF00324 Amino acid permease AB285_03600 PF00128 Alpha amylase, catalytic domain AB285_03600 PF02903 Alpha amylase, N-terminal ig-like domain AB285_03615 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB285_03615 PF00578 AhpC/TSA family AB285_03620 PF04336 Acyl carrier protein phosphodiesterase AB285_03625 PF02547 Queuosine biosynthesis protein AB285_03630 PF01702 Queuine tRNA-ribosyltransferase AB285_03635 PF02699 Preprotein translocase subunit AB285_03640 PF07549 SecD/SecF GG Motif AB285_03640 PF13721 SecD export protein N-terminal TM region AB285_03640 PF02355 Protein export membrane protein AB285_03645 PF02355 Protein export membrane protein AB285_03645 PF07549 SecD/SecF GG Motif AB285_03660 PF03502 Nucleoside-specific channel-forming protein, Tsx AB285_03665 PF11622 Protein of unknown function (DUF3251) AB285_03670 PF03477 ATP cone domain AB285_03675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB285_03675 PF01872 RibD C-terminal domain AB285_03680 PF00885 6,7-dimethyl-8-ribityllumazine synthase AB285_03685 PF01029 NusB family AB285_03690 PF02769 AIR synthase related protein, C-terminal domain AB285_03690 PF00586 AIR synthase related protein, N-terminal domain AB285_03695 PF00248 Aldo/keto reductase family AB285_03700 PF02779 Transketolase, pyrimidine binding domain AB285_03700 PF02780 Transketolase, C-terminal domain AB285_03700 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AB285_03705 PF00348 Polyprenyl synthetase AB285_03710 PF02609 Exonuclease VII small subunit AB285_03715 PF02926 THUMP domain AB285_03715 PF02568 Thiamine biosynthesis protein (ThiI) AB285_03720 PF00392 Bacterial regulatory proteins, gntR family AB285_03720 PF07702 UTRA domain AB285_03725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AB285_03730 PF02056 Family 4 glycosyl hydrolase AB285_03730 PF11975 Family 4 glycosyl hydrolase C-terminal domain AB285_03735 PF02378 Phosphotransferase system, EIIC AB285_03740 PF01965 DJ-1/PfpI family AB285_03745 PF08546 Ketopantoate reductase PanE/ApbA C terminal AB285_03745 PF02558 Ketopantoate reductase PanE/ApbA AB285_03750 PF04461 Protein of unknown function (DUF520) AB285_03755 PF07690 Major Facilitator Superfamily AB285_03760 PF00596 Class II Aldolase and Adducin N-terminal domain AB285_03765 PF00356 Bacterial regulatory proteins, lacI family AB285_03770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_03770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_03780 PF02653 Branched-chain amino acid transport system / permease component AB285_03785 PF00005 ABC transporter AB285_03790 PF02952 L-fucose isomerase, C-terminal domain AB285_03790 PF07881 L-fucose isomerase, first N-terminal domain AB285_03790 PF07882 L-fucose isomerase, second N-terminal domain AB285_03795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_03795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_03800 PF05025 RbsD / FucU transport protein family AB285_03805 PF01040 UbiA prenyltransferase family AB285_03810 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AB285_03815 PF00510 Cytochrome c oxidase subunit III AB285_03820 PF00115 Cytochrome C and Quinol oxidase polypeptide I AB285_03825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AB285_03825 PF06481 COX Aromatic Rich Motif AB285_03835 PF07690 Major Facilitator Superfamily AB285_03840 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AB285_03840 PF03923 Uncharacterized lipoprotein AB285_03845 PF01722 BolA-like protein AB285_03850 PF05697 Bacterial trigger factor protein (TF) AB285_03850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB285_03850 PF05698 Bacterial trigger factor protein (TF) C-terminus AB285_03855 PF00574 Clp protease AB285_03860 PF07724 AAA domain (Cdc48 subfamily) AB285_03860 PF10431 C-terminal, D2-small domain, of ClpB protein AB285_03860 PF06689 ClpX C4-type zinc finger AB285_03865 PF02190 ATP-dependent protease La (LON) substrate-binding domain AB285_03865 PF05362 Lon protease (S16) C-terminal proteolytic domain AB285_03865 PF00004 ATPase family associated with various cellular activities (AAA) AB285_03870 PF00216 Bacterial DNA-binding protein AB285_03875 PF13145 PPIC-type PPIASE domain AB285_03890 PF06508 Queuosine biosynthesis protein QueC AB285_03895 PF12793 Sugar transport-related sRNA regulator N-term AB285_03895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_03905 PF00291 Pyridoxal-phosphate dependent enzyme AB285_03910 PF13404 AsnC-type helix-turn-helix domain AB285_03910 PF01037 Lrp/AsnC ligand binding domain AB285_03915 PF00664 ABC transporter transmembrane region AB285_03915 PF00005 ABC transporter AB285_03920 PF00005 ABC transporter AB285_03920 PF00664 ABC transporter transmembrane region AB285_03925 PF00543 Nitrogen regulatory protein P-II AB285_03930 PF00909 Ammonium Transporter Family AB285_03940 PF09619 Type III secretion system lipoprotein chaperone (YscW) AB285_03945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB285_03960 PF00155 Aminotransferase class I and II AB285_03960 PF00392 Bacterial regulatory proteins, gntR family AB285_03970 PF00356 Bacterial regulatory proteins, lacI family AB285_03975 PF16353 Domain of unknown function(DUF4981) AB285_03975 PF00703 Glycosyl hydrolases family 2 AB285_03975 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AB285_03975 PF02837 Glycosyl hydrolases family 2, sugar binding domain AB285_03975 PF02929 Beta galactosidase small chain AB285_03980 PF03824 High-affinity nickel-transport protein AB285_03985 PF02583 Metal-sensitive transcriptional repressor AB285_03990 PF00563 EAL domain AB285_03990 PF12792 CSS motif domain associated with EAL AB285_03995 PF01197 Ribosomal protein L31 AB285_04000 PF00444 Ribosomal protein L36 AB285_04010 PF00155 Aminotransferase class I and II AB285_04010 PF00392 Bacterial regulatory proteins, gntR family AB285_04015 PF10777 Inner membrane protein YlaC AB285_04020 PF14602 Hexapeptide repeat of succinyl-transferase AB285_04020 PF12464 Maltose acetyltransferase AB285_04025 PF05321 Haemolysin expression modulating protein AB285_04030 PF10757 Biofilm formation regulator YbaJ AB285_04035 PF00873 AcrB/AcrD/AcrF family AB285_04040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_04040 PF00529 HlyD membrane-fusion protein of T1SS AB285_04045 PF00440 Bacterial regulatory proteins, tetR family AB285_04045 PF08361 MAATS-type transcriptional repressor, C-terminal region AB285_04050 PF12794 Mechanosensitive ion channel inner membrane domain 1 AB285_04050 PF00924 Mechanosensitive ion channel AB285_04050 PF12795 Mechanosensitive ion channel porin domain AB285_04060 PF07445 Primosomal replication protein priC AB285_04065 PF04304 Protein of unknown function (DUF454) AB285_04070 PF00156 Phosphoribosyl transferase domain AB285_04075 PF12169 DNA polymerase III subunits gamma and tau domain III AB285_04075 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AB285_04075 PF12170 DNA polymerase III tau subunit V interacting with alpha AB285_04080 PF02575 YbaB/EbfC DNA-binding family AB285_04085 PF02132 RecR protein AB285_04085 PF13662 Toprim domain AB285_04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_04090 PF00183 Hsp90 protein AB285_04095 PF05191 Adenylate kinase, active site lid AB285_04100 PF00762 Ferrochelatase AB285_04105 PF00294 pfkB family carbohydrate kinase AB285_04110 PF00999 Sodium/hydrogen exchanger family AB285_04110 PF02254 TrkA-N domain AB285_04115 PF07690 Major Facilitator Superfamily AB285_04120 PF02872 5'-nucleotidase, C-terminal domain AB285_04120 PF00149 Calcineurin-like phosphoesterase AB285_04125 PF04073 Aminoacyl-tRNA editing domain AB285_04130 PF01963 TraB family AB285_04135 PF00403 Heavy-metal-associated domain AB285_04140 PF13411 MerR HTH family regulatory protein AB285_04145 PF01957 NfeD-like C-terminal, partner-binding AB285_04150 PF01145 SPFH domain / Band 7 family AB285_04150 PF16200 C-terminal region of band_7 AB285_04160 PF00005 ABC transporter AB285_04165 PF03649 Uncharacterised protein family (UPF0014) AB285_04170 PF00085 Thioredoxin AB285_04175 PF00106 short chain dehydrogenase AB285_04180 PF13472 GDSL-like Lipase/Acylhydrolase family AB285_04185 PF00005 ABC transporter AB285_04205 PF02222 ATP-grasp domain AB285_04205 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AB285_04210 PF00731 AIR carboxylase AB285_04215 PF00149 Calcineurin-like phosphoesterase AB285_04220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB285_04225 PF09190 DALR domain AB285_04225 PF01406 tRNA synthetases class I (C) catalytic domain AB285_04230 PF04307 LexA-binding, inner membrane-associated putative hydrolase AB285_04235 PF00356 Bacterial regulatory proteins, lacI family AB285_04235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_04240 PF00367 phosphotransferase system, EIIB AB285_04240 PF02378 Phosphotransferase system, EIIC AB285_04240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB285_04250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AB285_04250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AB285_04255 PF00419 Fimbrial protein AB285_04265 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_04265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_04270 PF13953 PapC C-terminal domain AB285_04270 PF13954 PapC N-terminal domain AB285_04270 PF00577 Outer membrane usher protein AB285_04275 PF00419 Fimbrial protein AB285_04280 PF00419 Fimbrial protein AB285_04285 PF00072 Response regulator receiver domain AB285_04285 PF00196 Bacterial regulatory proteins, luxR family AB285_04305 PF07338 Protein of unknown function (DUF1471) AB285_04310 PF00593 TonB dependent receptor AB285_04310 PF07715 TonB-dependent Receptor Plug Domain AB285_04320 PF00324 Amino acid permease AB285_04325 PF03825 Nucleoside H+ symporter AB285_04340 PF00356 Bacterial regulatory proteins, lacI family AB285_04345 PF00924 Mechanosensitive ion channel AB285_04350 PF07690 Major Facilitator Superfamily AB285_04375 PF12833 Helix-turn-helix domain AB285_04390 PF06643 Protein of unknown function (DUF1158) AB285_04395 PF00690 Cation transporter/ATPase, N-terminus AB285_04395 PF00689 Cation transporting ATPase, C-terminus AB285_04400 PF13533 Biotin-lipoyl like AB285_04405 PF00873 AcrB/AcrD/AcrF family AB285_04410 PF04107 Glutamate-cysteine ligase family 2(GCS2) AB285_04415 PF08546 Ketopantoate reductase PanE/ApbA C terminal AB285_04415 PF02558 Ketopantoate reductase PanE/ApbA AB285_04435 PF04107 Glutamate-cysteine ligase family 2(GCS2) AB285_04440 PF02558 Ketopantoate reductase PanE/ApbA AB285_04440 PF08546 Ketopantoate reductase PanE/ApbA C terminal AB285_04445 PF02677 Epoxyqueuosine reductase QueH AB285_04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_04450 PF03466 LysR substrate binding domain AB285_04455 PF03306 Alpha-acetolactate decarboxylase AB285_04460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_04460 PF00205 Thiamine pyrophosphate enzyme, central domain AB285_04460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_04465 PF00106 short chain dehydrogenase AB285_04475 PF00005 ABC transporter AB285_04475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_04480 PF00005 ABC transporter AB285_04480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_04490 PF00528 Binding-protein-dependent transport system inner membrane component AB285_04505 PF05199 GMC oxidoreductase AB285_04505 PF00732 GMC oxidoreductase AB285_04510 PF00171 Aldehyde dehydrogenase family AB285_04515 PF13977 BetI-type transcriptional repressor, C-terminal AB285_04515 PF00440 Bacterial regulatory proteins, tetR family AB285_04520 PF02028 BCCT, betaine/carnitine/choline family transporter AB285_04545 PF01297 Zinc-uptake complex component A periplasmic AB285_04550 PF00005 ABC transporter AB285_04555 PF00950 ABC 3 transport family AB285_04560 PF00950 ABC 3 transport family AB285_04565 PF01648 4'-phosphopantetheinyl transferase superfamily AB285_04565 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AB285_04570 PF07715 TonB-dependent Receptor Plug Domain AB285_04570 PF00593 TonB dependent receptor AB285_04575 PF00756 Putative esterase AB285_04575 PF11806 Domain of unknown function (DUF3327) AB285_04580 PF03621 MbtH-like protein AB285_04585 PF00501 AMP-binding enzyme AB285_04585 PF00975 Thioesterase domain AB285_04585 PF00550 Phosphopantetheine attachment site AB285_04585 PF00668 Condensation domain AB285_04585 PF13193 AMP-binding enzyme C-terminal domain AB285_04590 PF00005 ABC transporter AB285_04595 PF01032 FecCD transport family AB285_04600 PF01032 FecCD transport family AB285_04605 PF05977 Transmembrane secretion effector AB285_04610 PF01497 Periplasmic binding protein AB285_04615 PF00425 chorismate binding enzyme AB285_04620 PF13193 AMP-binding enzyme C-terminal domain AB285_04620 PF00501 AMP-binding enzyme AB285_04625 PF00550 Phosphopantetheine attachment site AB285_04625 PF00857 Isochorismatase family AB285_04635 PF03061 Thioesterase superfamily AB285_04640 PF13722 5TM C-terminal transporter carbon starvation CstA AB285_04640 PF02554 Carbon starvation protein CstA AB285_04645 PF04328 Selenoprotein, putative AB285_04665 PF00465 Iron-containing alcohol dehydrogenase AB285_04670 PF00005 ABC transporter AB285_04675 PF02653 Branched-chain amino acid transport system / permease component AB285_04690 PF01636 Phosphotransferase enzyme family AB285_04695 PF01008 Initiation factor 2 subunit family AB285_04705 PF13693 Winged helix-turn-helix DNA-binding AB285_04720 PF03079 ARD/ARD' family AB285_04730 PF00596 Class II Aldolase and Adducin N-terminal domain AB285_04735 PF00155 Aminotransferase class I and II AB285_04740 PF02195 ParB-like nuclease domain AB285_04745 PF11922 Domain of unknown function (DUF3440) AB285_04745 PF01507 Phosphoadenosine phosphosulfate reductase family AB285_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_04750 PF03466 LysR substrate binding domain AB285_04755 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB285_04755 PF00578 AhpC/TSA family AB285_04760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_04760 PF13192 Thioredoxin domain AB285_04765 PF00582 Universal stress protein family AB285_04770 PF08240 Alcohol dehydrogenase GroES-like domain AB285_04770 PF00107 Zinc-binding dehydrogenase AB285_04770 PF13823 Alcohol dehydrogenase GroES-associated AB285_04775 PF01272 Transcription elongation factor, GreA/GreB, C-term AB285_04775 PF14760 Rnk N-terminus AB285_04785 PF12833 Helix-turn-helix domain AB285_04790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_04790 PF00381 PTS HPr component phosphorylation site AB285_04790 PF02896 PEP-utilising enzyme, TIM barrel domain AB285_04790 PF00391 PEP-utilising enzyme, mobile domain AB285_04790 PF05524 PEP-utilising enzyme, N-terminal AB285_04795 PF05343 M42 glutamyl aminopeptidase AB285_04800 PF01321 Creatinase/Prolidase N-terminal domain AB285_04800 PF00557 Metallopeptidase family M24 AB285_04805 PF02378 Phosphotransferase system, EIIC AB285_04810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_04815 PF00445 Ribonuclease T2 family AB285_04820 PF03606 C4-dicarboxylate anaerobic carrier AB285_04840 PF00529 HlyD membrane-fusion protein of T1SS AB285_04840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_04845 PF00873 AcrB/AcrD/AcrF family AB285_04850 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AB285_04855 PF00313 'Cold-shock' DNA-binding domain AB285_04860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AB285_04865 PF00795 Carbon-nitrogen hydrolase AB285_04870 PF02416 mttA/Hcf106 family AB285_04875 PF04055 Radical SAM superfamily AB285_04875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AB285_04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_04880 PF03466 LysR substrate binding domain AB285_04885 PF03099 Biotin/lipoate A/B protein ligase family AB285_04890 PF04359 Protein of unknown function (DUF493) AB285_04895 PF07943 Penicillin-binding protein 5, C-terminal domain AB285_04895 PF00768 D-alanyl-D-alanine carboxypeptidase AB285_04900 PF03330 Lytic transglycolase AB285_04900 PF05036 Sporulation related domain AB285_04905 PF01098 Cell cycle protein AB285_04910 PF03717 Penicillin-binding Protein dimerisation domain AB285_04910 PF00905 Penicillin binding protein transpeptidase domain AB285_04915 PF02590 Predicted SPOUT methyltransferase AB285_04925 PF01467 Cytidylyltransferase-like AB285_04930 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AB285_04930 PF06144 DNA polymerase III, delta subunit AB285_04935 PF04390 Lipopolysaccharide-assembly AB285_04940 PF00133 tRNA synthetases class I (I, L, M and V) AB285_04940 PF08264 Anticodon-binding domain of tRNA AB285_04940 PF13603 Leucyl-tRNA synthetase, Domain 2 AB285_04945 PF07295 Zinc-ribbon containing domain AB285_04950 PF01156 Inosine-uridine preferring nucleoside hydrolase AB285_04955 PF00005 ABC transporter AB285_04960 PF00528 Binding-protein-dependent transport system inner membrane component AB285_04965 PF00528 Binding-protein-dependent transport system inner membrane component AB285_04970 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_04975 PF00795 Carbon-nitrogen hydrolase AB285_04980 PF03471 Transporter associated domain AB285_04980 PF00571 CBS domain AB285_04985 PF02130 Uncharacterized protein family UPF0054 AB285_04990 PF02562 PhoH-like protein AB285_04995 PF00919 Uncharacterized protein family UPF0004 AB285_04995 PF04055 Radical SAM superfamily AB285_04995 PF01938 TRAM domain AB285_05000 PF01494 FAD binding domain AB285_05040 PF13537 Glutamine amidotransferase domain AB285_05040 PF00733 Asparagine synthase AB285_05045 PF13344 Haloacid dehalogenase-like hydrolase AB285_05050 PF01047 MarR family AB285_05050 PF00480 ROK family AB285_05055 PF01979 Amidohydrolase family AB285_05060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AB285_05065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB285_05065 PF02378 Phosphotransferase system, EIIC AB285_05065 PF00367 phosphotransferase system, EIIB AB285_05070 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB285_05070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AB285_05080 PF13982 YbfN-like lipoprotein AB285_05085 PF01475 Ferric uptake regulator family AB285_05090 PF00258 Flavodoxin AB285_05095 PF01402 Ribbon-helix-helix protein, copG family AB285_05100 PF12697 Alpha/beta hydrolase family AB285_05105 PF03925 SeqA protein C-terminal domain AB285_05105 PF17206 SeqA protein N-terminal domain AB285_05110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB285_05110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB285_05110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB285_05110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB285_05115 PF13520 Amino acid permease AB285_05120 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AB285_05120 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AB285_05120 PF01276 Orn/Lys/Arg decarboxylase, major domain AB285_05125 PF00486 Transcriptional regulatory protein, C terminal AB285_05125 PF00072 Response regulator receiver domain AB285_05130 PF13493 Domain of unknown function (DUF4118) AB285_05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_05130 PF00512 His Kinase A (phospho-acceptor) domain AB285_05130 PF13492 GAF domain AB285_05130 PF02702 Osmosensitive K+ channel His kinase sensor domain AB285_05135 PF02669 K+-transporting ATPase, c chain AB285_05145 PF03814 Potassium-transporting ATPase A subunit AB285_05150 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AB285_05155 PF10725 Protein of unknown function (DUF2517) AB285_05160 PF00875 DNA photolyase AB285_05160 PF03441 FAD binding domain of DNA photolyase AB285_05165 PF01784 NIF3 (NGG1p interacting factor 3) AB285_05170 PF02682 Carboxyltransferase domain, subdomain C and D AB285_05175 PF02626 Carboxyltransferase domain, subdomain A and B AB285_05180 PF03746 LamB/YcsF family AB285_05185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AB285_05185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AB285_05190 PF00285 Citrate synthase, C-terminal domain AB285_05195 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB285_05200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB285_05205 PF02910 Fumarate reductase flavoprotein C-term AB285_05205 PF00890 FAD binding domain AB285_05210 PF13085 2Fe-2S iron-sulfur cluster binding domain AB285_05215 PF16870 2-oxoglutarate dehydrogenase C-terminal AB285_05215 PF00676 Dehydrogenase E1 component AB285_05215 PF16078 2-oxoglutarate dehydrogenase N-terminus AB285_05215 PF02779 Transketolase, pyrimidine binding domain AB285_05220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB285_05220 PF00364 Biotin-requiring enzyme AB285_05220 PF02817 e3 binding domain AB285_05225 PF08442 ATP-grasp domain AB285_05225 PF00549 CoA-ligase AB285_05230 PF00549 CoA-ligase AB285_05230 PF02629 CoA binding domain AB285_05235 PF00392 Bacterial regulatory proteins, gntR family AB285_05235 PF07702 UTRA domain AB285_05240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_05240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_05240 PF02378 Phosphotransferase system, EIIC AB285_05245 PF01074 Glycosyl hydrolases family 38 N-terminal domain AB285_05245 PF07748 Glycosyl hydrolases family 38 C-terminal domain AB285_05245 PF09261 Alpha mannosidase middle domain AB285_05250 PF01654 Cytochrome bd terminal oxidase subunit I AB285_05255 PF02322 Cytochrome bd terminal oxidase subunit II AB285_05260 PF08173 Membrane bound YbgT-like protein AB285_05265 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AB285_05270 PF03061 Thioesterase superfamily AB285_05275 PF01618 MotA/TolQ/ExbB proton channel family AB285_05280 PF02472 Biopolymer transport protein ExbD/TolR AB285_05285 PF06519 TolA C-terminal AB285_05290 PF07676 WD40-like Beta Propeller Repeat AB285_05290 PF04052 TolB amino-terminal domain AB285_05295 PF00691 OmpA family AB285_05300 PF13174 Tetratricopeptide repeat AB285_05300 PF16331 TolA binding protein trimerisation AB285_05330 PF02445 Quinolinate synthetase A protein AB285_05335 PF04973 Nicotinamide mononucleotide transporter AB285_05340 PF01545 Cation efflux family AB285_05345 PF13985 YbgS-like protein AB285_05350 PF00793 DAHP synthetase I family AB285_05355 PF00300 Histidine phosphatase superfamily (branch 1) AB285_05360 PF01263 Aldose 1-epimerase AB285_05365 PF00288 GHMP kinases N terminal domain AB285_05365 PF10509 Galactokinase galactose-binding signature AB285_05365 PF08544 GHMP kinases C terminal AB285_05370 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AB285_05370 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AB285_05375 PF16363 GDP-mannose 4,6 dehydratase AB285_05380 PF00005 ABC transporter AB285_05385 PF03459 TOBE domain AB285_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_05390 PF10766 Multidrug efflux pump-associated protein AcrZ AB285_05400 PF00528 Binding-protein-dependent transport system inner membrane component AB285_05405 PF03459 TOBE domain AB285_05405 PF00005 ABC transporter AB285_05415 PF10282 Lactonase, 7-bladed beta-propeller AB285_05420 PF01095 Pectinesterase AB285_05425 PF01979 Amidohydrolase family AB285_05430 PF00491 Arginase family AB285_05435 PF07702 UTRA domain AB285_05435 PF00392 Bacterial regulatory proteins, gntR family AB285_05440 PF17392 Urocanase C-terminal domain AB285_05440 PF01175 Urocanase Rossmann-like domain AB285_05440 PF17391 Urocanase N-terminal domain AB285_05445 PF00221 Aromatic amino acid lyase AB285_05450 PF01161 Phosphatidylethanolamine-binding protein AB285_05455 PF00202 Aminotransferase class-III AB285_05460 PF06968 Biotin and Thiamin Synthesis associated domain AB285_05460 PF04055 Radical SAM superfamily AB285_05465 PF00155 Aminotransferase class I and II AB285_05470 PF08241 Methyltransferase domain AB285_05480 PF00005 ABC transporter AB285_05480 PF09383 NIL domain AB285_05485 PF04851 Type III restriction enzyme, res subunit AB285_05485 PF00271 Helicase conserved C-terminal domain AB285_05485 PF12344 Ultra-violet resistance protein B AB285_05485 PF17757 UvrB interaction domain AB285_05485 PF02151 UvrB/uvrC motif AB285_05490 PF01933 Uncharacterised protein family UPF0052 AB285_05495 PF06463 Molybdenum Cofactor Synthesis C AB285_05495 PF04055 Radical SAM superfamily AB285_05500 PF00994 Probable molybdopterin binding domain AB285_05505 PF01967 MoaC family AB285_05510 PF02597 ThiS family AB285_05515 PF02391 MoaE protein AB285_05520 PF01027 Inhibitor of apoptosis-promoting Bax1 AB285_05525 PF03706 Lysylphosphatidylglycerol synthase TM region AB285_05530 PF13091 PLD-like domain AB285_05535 PF03372 Endonuclease/Exonuclease/phosphatase family AB285_05540 PF11076 Putative inner membrane protein YbhQ AB285_05555 PF00005 ABC transporter AB285_05560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_05565 PF00440 Bacterial regulatory proteins, tetR family AB285_05565 PF09209 Tetracyclin repressor-like, C-terminal domain AB285_05570 PF00271 Helicase conserved C-terminal domain AB285_05570 PF00270 DEAD/DEAH box helicase AB285_05575 PF13307 Helicase C-terminal domain AB285_05575 PF06733 DEAD_2 AB285_05575 PF00270 DEAD/DEAH box helicase AB285_05590 PF13953 PapC C-terminal domain AB285_05590 PF00577 Outer membrane usher protein AB285_05590 PF13954 PapC N-terminal domain AB285_05595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_05595 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_05600 PF00419 Fimbrial protein AB285_05605 PF02885 Glycosyl transferase family, helical bundle domain AB285_05610 PF07338 Protein of unknown function (DUF1471) AB285_05615 PF01258 Prokaryotic dksA/traR C4-type zinc finger AB285_05620 PF07338 Protein of unknown function (DUF1471) AB285_05630 PF05971 RNA methyltransferase AB285_05635 PF00924 Mechanosensitive ion channel AB285_05640 PF00005 ABC transporter AB285_05645 PF00528 Binding-protein-dependent transport system inner membrane component AB285_05650 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_05655 PF00210 Ferritin-like domain AB285_05660 PF00892 EamA-like transporter family AB285_05665 PF13505 Outer membrane protein beta-barrel domain AB285_05670 PF00884 Sulfatase AB285_05680 PF02742 Iron dependent repressor, metal binding and dimerisation domain AB285_05680 PF01325 Iron dependent repressor, N-terminal DNA binding domain AB285_05685 PF03600 Citrate transporter AB285_05690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_05690 PF00529 HlyD membrane-fusion protein of T1SS AB285_05695 PF07690 Major Facilitator Superfamily AB285_05700 PF02321 Outer membrane efflux protein AB285_05705 PF00248 Aldo/keto reductase family AB285_05710 PF00593 TonB dependent receptor AB285_05710 PF07715 TonB-dependent Receptor Plug Domain AB285_05715 PF00756 Putative esterase AB285_05720 PF00756 Putative esterase AB285_05720 PF11806 Domain of unknown function (DUF3327) AB285_05725 PF00664 ABC transporter transmembrane region AB285_05725 PF00005 ABC transporter AB285_05730 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AB285_05735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_05745 PF00005 ABC transporter AB285_05745 PF12704 MacB-like periplasmic core domain AB285_05745 PF02687 FtsX-like permease family AB285_05750 PF02321 Outer membrane efflux protein AB285_05755 PF00232 Glycosyl hydrolase family 1 AB285_05760 PF02378 Phosphotransferase system, EIIC AB285_05765 PF00392 Bacterial regulatory proteins, gntR family AB285_05765 PF07702 UTRA domain AB285_05770 PF03734 L,D-transpeptidase catalytic domain AB285_05770 PF17969 L,D-transpeptidase C-terminal domain AB285_05775 PF12848 ABC transporter AB285_05775 PF00005 ABC transporter AB285_05780 PF01055 Glycosyl hydrolases family 31 AB285_05780 PF17137 Domain of unknown function (DUF5110) AB285_05780 PF13802 Galactose mutarotase-like AB285_05780 PF16338 Domain of unknown function (DUF4968) AB285_05785 PF07690 Major Facilitator Superfamily AB285_05790 PF00356 Bacterial regulatory proteins, lacI family AB285_05795 PF07350 Protein of unknown function (DUF1479) AB285_05810 PF04055 Radical SAM superfamily AB285_05815 PF00923 Transaldolase/Fructose-6-phosphate aldolase AB285_05820 PF00899 ThiF family AB285_05825 PF03453 MoeA N-terminal region (domain I and II) AB285_05825 PF00994 Probable molybdopterin binding domain AB285_05825 PF03454 MoeA C-terminal region (domain IV) AB285_05830 PF01112 Asparaginase AB285_05835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_05835 PF00005 ABC transporter AB285_05840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_05845 PF00528 Binding-protein-dependent transport system inner membrane component AB285_05850 PF12911 N-terminal TM domain of oligopeptide transport permease C AB285_05850 PF00528 Binding-protein-dependent transport system inner membrane component AB285_05855 PF04055 Radical SAM superfamily AB285_05855 PF18693 TRAM domain AB285_05855 PF00919 Uncharacterized protein family UPF0004 AB285_05865 PF07995 Glucose / Sorbosone dehydrogenase AB285_05870 PF00043 Glutathione S-transferase, C-terminal domain AB285_05870 PF13417 Glutathione S-transferase, N-terminal domain AB285_05875 PF00768 D-alanyl-D-alanine carboxypeptidase AB285_05875 PF07943 Penicillin-binding protein 5, C-terminal domain AB285_05880 PF00455 DeoR C terminal sensor domain AB285_05880 PF08220 DeoR-like helix-turn-helix domain AB285_05885 PF01569 PAP2 superfamily AB285_05895 PF07690 Major Facilitator Superfamily AB285_05905 PF07690 Major Facilitator Superfamily AB285_05910 PF00440 Bacterial regulatory proteins, tetR family AB285_05915 PF03960 ArsC family AB285_05920 PF02040 Arsenical pump membrane protein AB285_05925 PF01022 Bacterial regulatory protein, arsR family AB285_05940 PF02080 TrkA-C domain AB285_05940 PF06826 Predicted Permease Membrane Region AB285_05945 PF11045 Putative inner membrane protein of Enterobacteriaceae AB285_05950 PF00462 Glutaredoxin AB285_05955 PF00881 Nitroreductase family AB285_05960 PF18030 RimK PreATP-grasp domain AB285_05960 PF08443 RimK-like ATP-grasp domain AB285_05965 PF10722 Putative bacterial sensory transduction regulator AB285_05970 PF13416 Bacterial extracellular solute-binding protein AB285_05975 PF08402 TOBE domain AB285_05975 PF00005 ABC transporter AB285_05980 PF00528 Binding-protein-dependent transport system inner membrane component AB285_05985 PF00528 Binding-protein-dependent transport system inner membrane component AB285_05990 PF10767 Protein of unknown function (DUF2593) AB285_05995 PF05958 tRNA (Uracil-5-)-methyltransferase AB285_06005 PF00072 Response regulator receiver domain AB285_06005 PF00486 Transcriptional regulatory protein, C terminal AB285_06010 PF00512 His Kinase A (phospho-acceptor) domain AB285_06010 PF18698 Histidine kinase sensor domain AB285_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_06010 PF00672 HAMP domain AB285_06010 PF00989 PAS fold AB285_06015 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_06020 PF00528 Binding-protein-dependent transport system inner membrane component AB285_06025 PF00528 Binding-protein-dependent transport system inner membrane component AB285_06030 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_06035 PF00005 ABC transporter AB285_06040 PF12883 Protein of unknown function (DUF3828) AB285_06045 PF01906 Putative heavy-metal-binding AB285_06050 PF01510 N-acetylmuramoyl-L-alanine amidase AB285_06055 PF15977 Winged helix-turn-helix DNA binding AB285_06070 PF11356 Type II secretion system protein C AB285_06075 PF03958 Bacterial type II/III secretion system short domain AB285_06075 PF00263 Bacterial type II and III secretion system protein AB285_06080 PF00437 Type II/IV secretion system protein AB285_06085 PF00482 Type II secretion system (T2SS), protein F AB285_06090 PF07963 Prokaryotic N-terminal methylation motif AB285_06090 PF08334 Type II secretion system (T2SS), protein G AB285_06095 PF07963 Prokaryotic N-terminal methylation motif AB285_06100 PF07963 Prokaryotic N-terminal methylation motif AB285_06100 PF02501 Type II secretion system (T2SS), protein I AB285_06105 PF07963 Prokaryotic N-terminal methylation motif AB285_06105 PF11612 Type II secretion system (T2SS), protein J AB285_06110 PF03934 Type II secretion system (T2SS), protein K AB285_06125 PF01478 Type IV leader peptidase family AB285_06125 PF06750 Bacterial Peptidase A24 N-terminal domain AB285_06130 PF08329 Chitinase A, N-terminal domain AB285_06130 PF00704 Glycosyl hydrolases family 18 AB285_06135 PF01464 Transglycosylase SLT domain AB285_06140 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AB285_06140 PF18416 N-acetylglucosamine binding protein domain 2 AB285_06145 PF01370 NAD dependent epimerase/dehydratase family AB285_06150 PF13460 NAD(P)H-binding AB285_06150 PF11066 Protein of unknown function (DUF2867) AB285_06155 PF01212 Beta-eliminating lyase AB285_06160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_06160 PF00205 Thiamine pyrophosphate enzyme, central domain AB285_06160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_06170 PF00970 Oxidoreductase FAD-binding domain AB285_06170 PF00111 2Fe-2S iron-sulfur cluster binding domain AB285_06170 PF00175 Oxidoreductase NAD-binding domain AB285_06175 PF03063 Prismane/CO dehydrogenase family AB285_06180 PF03956 Lysine exporter LysO AB285_06185 PF00230 Major intrinsic protein AB285_06190 PF11398 Protein of unknown function (DUF2813) AB285_06195 PF04393 Protein of unknown function (DUF535) AB285_06200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_06205 PF12704 MacB-like periplasmic core domain AB285_06205 PF02687 FtsX-like permease family AB285_06205 PF00005 ABC transporter AB285_06210 PF00313 'Cold-shock' DNA-binding domain AB285_06215 PF02617 ATP-dependent Clp protease adaptor protein ClpS AB285_06220 PF02861 Clp amino terminal domain, pathogenicity island component AB285_06220 PF17871 AAA lid domain AB285_06220 PF07724 AAA domain (Cdc48 subfamily) AB285_06220 PF00004 ATPase family associated with various cellular activities (AAA) AB285_06220 PF10431 C-terminal, D2-small domain, of ClpB protein AB285_06225 PF01176 Translation initiation factor 1A / IF-1 AB285_06230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AB285_06235 PF00664 ABC transporter transmembrane region AB285_06235 PF00005 ABC transporter AB285_06240 PF00005 ABC transporter AB285_06240 PF00664 ABC transporter transmembrane region AB285_06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_06250 PF01037 Lrp/AsnC ligand binding domain AB285_06255 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AB285_06255 PF01580 FtsK/SpoIIIE family AB285_06255 PF17854 FtsK alpha domain AB285_06255 PF09397 Ftsk gamma domain AB285_06260 PF03548 Outer membrane lipoprotein carrier protein LolA AB285_06265 PF16193 AAA C-terminal domain AB285_06265 PF12002 MgsA AAA+ ATPase C terminal AB285_06265 PF00004 ATPase family associated with various cellular activities (AAA) AB285_06270 PF02403 Seryl-tRNA synthetase N-terminal domain AB285_06270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB285_06275 PF01568 Molydopterin dinucleotide binding domain AB285_06275 PF00384 Molybdopterin oxidoreductase AB285_06275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_06280 PF12800 4Fe-4S binding domain AB285_06280 PF13247 4Fe-4S dicluster domain AB285_06285 PF04976 DMSO reductase anchor subunit (DmsC) AB285_06290 PF07690 Major Facilitator Superfamily AB285_06300 PF04055 Radical SAM superfamily AB285_06305 PF01228 Glycine radical AB285_06305 PF02901 Pyruvate formate lyase-like AB285_06310 PF01226 Formate/nitrite transporter AB285_06315 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AB285_06315 PF18381 YcaO cyclodehydratase C-terminal domain AB285_06320 PF04239 Protein of unknown function (DUF421) AB285_06325 PF00266 Aminotransferase class-V AB285_06330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB285_06335 PF02224 Cytidylate kinase AB285_06340 PF00575 S1 RNA binding domain AB285_06345 PF00216 Bacterial DNA-binding protein AB285_06350 PF03772 Competence protein AB285_06350 PF00753 Metallo-beta-lactamase superfamily AB285_06355 PF00005 ABC transporter AB285_06355 PF00664 ABC transporter transmembrane region AB285_06360 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AB285_06365 PF06224 Winged helix DNA-binding domain AB285_06370 PF03966 Trm112p-like protein AB285_06375 PF02348 Cytidylyltransferase AB285_06380 PF01636 Phosphotransferase enzyme family AB285_06385 PF02698 DUF218 domain AB285_06395 PF17193 MukF C-terminal domain AB285_06395 PF17192 MukF middle domain AB285_06395 PF03882 MukF winged-helix domain AB285_06400 PF04288 MukE-like family AB285_06405 PF04310 MukB N-terminal AB285_06405 PF16330 MukB hinge domain AB285_06410 PF01471 Putative peptidoglycan binding domain AB285_06410 PF03734 L,D-transpeptidase catalytic domain AB285_06415 PF05951 Bacterial protein of unknown function (DUF882) AB285_06420 PF00753 Metallo-beta-lactamase superfamily AB285_06425 PF00155 Aminotransferase class I and II AB285_06430 PF00267 Gram-negative porin AB285_06435 PF00152 tRNA synthetases class II (D, K and N) AB285_06435 PF01336 OB-fold nucleic acid binding domain AB285_06440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB285_06440 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AB285_06445 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AB285_06445 PF11940 Domain of unknown function (DUF3458) Ig-like fold AB285_06445 PF01433 Peptidase family M1 domain AB285_06450 PF00005 ABC transporter AB285_06455 PF00528 Binding-protein-dependent transport system inner membrane component AB285_06460 PF00296 Luciferase-like monooxygenase AB285_06465 PF09084 NMT1/THI5 like AB285_06470 PF03358 NADPH-dependent FMN reductase AB285_06475 PF01180 Dihydroorotate dehydrogenase AB285_06480 PF07126 Cell-division protein ZapC AB285_06485 PF03473 MOSC domain AB285_06485 PF00111 2Fe-2S iron-sulfur cluster binding domain AB285_06485 PF03476 MOSC N-terminal beta barrel domain AB285_06490 PF10672 S-adenosylmethionine-dependent methyltransferase AB285_06490 PF01170 Putative RNA methylase family UPF0020 AB285_06490 PF02926 THUMP domain AB285_06495 PF00005 ABC transporter AB285_06495 PF16326 ABC transporter C-terminal domain AB285_06495 PF12848 ABC transporter AB285_06500 PF04403 Paraquat-inducible protein A AB285_06505 PF02470 MlaD protein AB285_06510 PF03886 ABC-type transport auxiliary lipoprotein component AB285_06515 PF04957 Ribosome modulation factor AB285_06520 PF07977 FabA-like domain AB285_06525 PF05362 Lon protease (S16) C-terminal proteolytic domain AB285_06525 PF13654 AAA domain AB285_06530 PF17414 MatP C-terminal ribbon-helix-helix domain AB285_06530 PF06303 MatP N-terminal domain AB285_06535 PF01389 OmpA-like transmembrane domain AB285_06535 PF00691 OmpA family AB285_06540 PF03846 Cell division inhibitor SulA AB285_06545 PF04994 TfoX C-terminal domain AB285_06545 PF04993 TfoX N-terminal domain AB285_06550 PF12805 FUSC-like inner membrane protein yccS AB285_06555 PF03733 Inner membrane component domain AB285_06560 PF13361 UvrD-like helicase C-terminal domain AB285_06560 PF00580 UvrD/REP helicase N-terminal domain AB285_06560 PF12462 DNA helicase IV / RNA helicase N terminal AB285_06565 PF02142 MGS-like domain AB285_06570 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AB285_06575 PF13380 CoA binding domain AB285_06580 PF08755 Hemimethylated DNA-binding protein YccV like AB285_06585 PF10672 S-adenosylmethionine-dependent methyltransferase AB285_06585 PF17785 PUA-like domain AB285_06590 PF00708 Acylphosphatase AB285_06595 PF04358 DsrC like protein AB285_06600 PF01027 Inhibitor of apoptosis-promoting Bax1 AB285_06605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_06615 PF00005 ABC transporter AB285_06620 PF01032 FecCD transport family AB285_06630 PF12795 Mechanosensitive ion channel porin domain AB285_06630 PF12794 Mechanosensitive ion channel inner membrane domain 1 AB285_06630 PF00924 Mechanosensitive ion channel AB285_06645 PF03448 MgtE intracellular N domain AB285_06645 PF00571 CBS domain AB285_06645 PF01769 Divalent cation transporter AB285_06650 PF09335 SNARE associated Golgi protein AB285_06660 PF01638 HxlR-like helix-turn-helix AB285_06670 PF00328 Histidine phosphatase superfamily (branch 2) AB285_06675 PF13993 YccJ-like protein AB285_06680 PF03358 NADPH-dependent FMN reductase AB285_06685 PF10685 Stress-induced bacterial acidophilic repeat motif AB285_06695 PF00860 Permease family AB285_06700 PF01613 Flavin reductase like domain AB285_06705 PF00881 Nitroreductase family AB285_06710 PF12697 Alpha/beta hydrolase family AB285_06715 PF01042 Endoribonuclease L-PSP AB285_06720 PF00857 Isochorismatase family AB285_06725 PF00296 Luciferase-like monooxygenase AB285_06730 PF08362 YcdC-like protein, C-terminal region AB285_06730 PF00440 Bacterial regulatory proteins, tetR family AB285_06740 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AB285_06740 PF14850 DNA-binding domain of Proline dehydrogenase AB285_06740 PF00171 Aldehyde dehydrogenase family AB285_06740 PF01619 Proline dehydrogenase AB285_06745 PF00474 Sodium:solute symporter family AB285_06755 PF07670 Nucleoside recognition AB285_06755 PF01773 Na+ dependent nucleoside transporter N-terminus AB285_06755 PF07662 Na+ dependent nucleoside transporter C-terminus AB285_06760 PF03239 Iron permease FTR1 family AB285_06765 PF09375 Imelysin AB285_06765 PF13473 Cupredoxin-like domain AB285_06770 PF04261 Dyp-type peroxidase family AB285_06775 PF02562 PhoH-like protein AB285_06780 PF01235 Sodium:alanine symporter family AB285_06790 PF00857 Isochorismatase family AB285_06795 PF05726 Pirin C-terminal cupin domain AB285_06795 PF02678 Pirin AB285_06800 PF03466 LysR substrate binding domain AB285_06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_06810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB285_06815 PF02811 PHP domain AB285_06820 PF02613 Nitrate reductase delta subunit AB285_06825 PF06496 Protein of unknown function (DUF1097) AB285_06830 PF03783 Curli production assembly/transport component CsgG AB285_06835 PF10614 Type VIII secretion system (T8SS), CsgF protein AB285_06840 PF10627 Curli assembly protein CsgE AB285_06845 PF00196 Bacterial regulatory proteins, luxR family AB285_06850 PF07012 Curlin associated repeat AB285_06855 PF07012 Curlin associated repeat AB285_06860 PF10610 Thin aggregative fimbriae synthesis protein AB285_06870 PF01661 Macro domain AB285_06875 PF01757 Acyltransferase family AB285_06880 PF04349 Periplasmic glucan biosynthesis protein, MdoG AB285_06885 PF00535 Glycosyl transferase family 2 AB285_06890 PF07119 Protein of unknown function (DUF1375) AB285_06895 PF13984 MsyB protein AB285_06900 PF07690 Major Facilitator Superfamily AB285_06905 PF03279 Bacterial lipid A biosynthesis acyltransferase AB285_06915 PF04264 YceI-like domain AB285_06920 PF01292 Prokaryotic cytochrome b561 AB285_06925 PF10968 Protein of unknown function (DUF2770) AB285_06930 PF01266 FAD dependent oxidoreductase AB285_06935 PF13991 BssS protein family AB285_06940 PF06183 DinI-like family AB285_06945 PF01979 Amidohydrolase family AB285_06950 PF07273 Protein of unknown function (DUF1439) AB285_06955 PF07690 Major Facilitator Superfamily AB285_06960 PF13302 Acetyltransferase (GNAT) domain AB285_06965 PF04337 Protein of unknown function, DUF480 AB285_06970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_06975 PF03023 Lipid II flippase MurJ AB285_06980 PF05130 FlgN protein AB285_06985 PF04316 Anti-sigma-28 factor, FlgM AB285_06990 PF13144 Chaperone for flagella basal body P-ring formation AB285_06995 PF00460 Flagella basal body rod protein AB285_07000 PF00460 Flagella basal body rod protein AB285_07000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AB285_07005 PF13861 FlgD Tudor-like domain AB285_07005 PF13860 FlgD Ig-like domain AB285_07005 PF03963 Flagellar hook capping protein - N-terminal region AB285_07010 PF00460 Flagella basal body rod protein AB285_07010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AB285_07010 PF07559 Flagellar basal body protein FlaE AB285_07015 PF00460 Flagella basal body rod protein AB285_07015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AB285_07020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AB285_07020 PF00460 Flagella basal body rod protein AB285_07025 PF02107 Flagellar L-ring protein AB285_07030 PF02119 Flagellar P-ring protein AB285_07035 PF10135 Rod binding protein AB285_07035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AB285_07040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AB285_07040 PF00460 Flagella basal body rod protein AB285_07045 PF00669 Bacterial flagellin N-terminal helical region AB285_07050 PF07690 Major Facilitator Superfamily AB285_07055 PF03466 LysR substrate binding domain AB285_07055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_07060 PF00575 S1 RNA binding domain AB285_07060 PF12111 Polyribonucleotide phosphorylase C terminal AB285_07060 PF10150 Ribonuclease E/G family AB285_07065 PF01479 S4 domain AB285_07065 PF00849 RNA pseudouridylate synthase AB285_07070 PF02545 Maf-like protein AB285_07075 PF02620 Large ribosomal RNA subunit accumulation protein YceD AB285_07080 PF01783 Ribosomal L32p protein family AB285_07085 PF02504 Fatty acid synthesis protein AB285_07090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AB285_07090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AB285_07095 PF00698 Acyl transferase domain AB285_07105 PF00550 Phosphopantetheine attachment site AB285_07110 PF02801 Beta-ketoacyl synthase, C-terminal domain AB285_07110 PF00109 Beta-ketoacyl synthase, N-terminal domain AB285_07115 PF01063 Amino-transferase class IV AB285_07120 PF02618 YceG-like family AB285_07125 PF02223 Thymidylate kinase AB285_07130 PF09115 DNA polymerase III, delta subunit, C terminal AB285_07135 PF01026 TatD related DNase AB285_07140 PF00367 phosphotransferase system, EIIB AB285_07140 PF02378 Phosphotransferase system, EIIC AB285_07145 PF00593 TonB dependent receptor AB285_07145 PF07715 TonB-dependent Receptor Plug Domain AB285_07150 PF01230 HIT domain AB285_07155 PF07233 Protein of unknown function (DUF1425) AB285_07160 PF13036 Peptidoglycan-synthase activator LpoB AB285_07165 PF01636 Phosphotransferase enzyme family AB285_07170 PF00933 Glycosyl hydrolase family 3 N terminal domain AB285_07175 PF05728 Uncharacterised protein family (UPF0227) AB285_07180 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_07185 PF05433 Glycine zipper 2TM domain AB285_07190 PF00440 Bacterial regulatory proteins, tetR family AB285_07195 PF07338 Protein of unknown function (DUF1471) AB285_07200 PF17969 L,D-transpeptidase C-terminal domain AB285_07200 PF01476 LysM domain AB285_07200 PF03734 L,D-transpeptidase catalytic domain AB285_07205 PF02559 CarD-like/TRCF domain AB285_07205 PF00270 DEAD/DEAH box helicase AB285_07205 PF00271 Helicase conserved C-terminal domain AB285_07205 PF03461 TRCF domain AB285_07205 PF17757 UvrB interaction domain AB285_07210 PF01757 Acyltransferase family AB285_07215 PF12704 MacB-like periplasmic core domain AB285_07215 PF02687 FtsX-like permease family AB285_07220 PF00005 ABC transporter AB285_07225 PF02687 FtsX-like permease family AB285_07225 PF12704 MacB-like periplasmic core domain AB285_07230 PF00480 ROK family AB285_07235 PF02146 Sir2 family AB285_07240 PF13416 Bacterial extracellular solute-binding protein AB285_07245 PF00528 Binding-protein-dependent transport system inner membrane component AB285_07250 PF00528 Binding-protein-dependent transport system inner membrane component AB285_07255 PF00005 ABC transporter AB285_07255 PF08402 TOBE domain AB285_07265 PF07687 Peptidase dimerisation domain AB285_07265 PF01546 Peptidase family M20/M25/M40 AB285_07275 PF08007 Cupin superfamily protein AB285_07280 PF08918 PhoQ Sensor AB285_07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_07285 PF00072 Response regulator receiver domain AB285_07285 PF00486 Transcriptional regulatory protein, C terminal AB285_07295 PF00206 Lyase AB285_07295 PF08328 Adenylosuccinate lyase C-terminal AB285_07300 PF04356 Protein of unknown function (DUF489) AB285_07310 PF00293 NUDIX domain AB285_07315 PF00849 RNA pseudouridylate synthase AB285_07320 PF00180 Isocitrate/isopropylmalate dehydrogenase AB285_07325 PF10820 Protein of unknown function (DUF2543) AB285_07330 PF12792 CSS motif domain associated with EAL AB285_07330 PF00563 EAL domain AB285_07335 PF04226 Transglycosylase associated protein AB285_07345 PF13185 GAF domain AB285_07345 PF00990 Diguanylate cyclase, GGDEF domain AB285_07350 PF03891 Domain of unknown function (DUF333) AB285_07360 PF04343 Protein of unknown function, DUF488 AB285_07365 PF06418 CTP synthase N-terminus AB285_07365 PF00117 Glutamine amidotransferase class-I AB285_07370 PF07690 Major Facilitator Superfamily AB285_07375 PF02311 AraC-like ligand binding domain AB285_07375 PF12833 Helix-turn-helix domain AB285_07380 PF04284 Protein of unknown function (DUF441) AB285_07395 PF04073 Aminoacyl-tRNA editing domain AB285_07400 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AB285_07400 PF00589 Phage integrase family AB285_07460 PF03354 Phage Terminase AB285_07480 PF05866 Endodeoxyribonuclease RusA AB285_07490 PF06147 Protein of unknown function (DUF968) AB285_07495 PF06530 Phage antitermination protein Q AB285_07555 PF03354 Phage Terminase AB285_07560 PF04860 Phage portal protein AB285_07565 PF00574 Clp protease AB285_07670 PF04285 Protein of unknown function (DUF444) AB285_07675 PF08298 PrkA AAA domain AB285_07675 PF06798 PrkA serine protein kinase C-terminal domain AB285_07680 PF06629 MltA-interacting protein MipA AB285_07685 PF01263 Aldose 1-epimerase AB285_07690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB285_07690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB285_07695 PF01641 SelR domain AB285_07700 PF07023 Protein of unknown function (DUF1315) AB285_07710 PF00857 Isochorismatase family AB285_07715 PF17763 Glutaminase/Asparaginase C-terminal domain AB285_07715 PF00710 Asparaginase, N-terminal AB285_07720 PF01343 Peptidase family S49 AB285_07725 PF00881 Nitroreductase family AB285_07730 PF02769 AIR synthase related protein, C-terminal domain AB285_07730 PF00586 AIR synthase related protein, N-terminal domain AB285_07735 PF01131 DNA topoisomerase AB285_07735 PF01751 Toprim domain AB285_07740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AB285_07740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB285_07745 PF07383 Protein of unknown function (DUF1496) AB285_07750 PF00293 NUDIX domain AB285_07755 PF02627 Carboxymuconolactone decarboxylase family AB285_07760 PF01066 CDP-alcohol phosphatidyltransferase AB285_07765 PF00581 Rhodanese-like domain AB285_07770 PF00005 ABC transporter AB285_07775 PF00528 Binding-protein-dependent transport system inner membrane component AB285_07780 PF13416 Bacterial extracellular solute-binding protein AB285_07790 PF03372 Endonuclease/Exonuclease/phosphatase family AB285_07795 PF00202 Aminotransferase class-III AB285_07800 PF04958 Arginine N-succinyltransferase beta subunit AB285_07805 PF00171 Aldehyde dehydrogenase family AB285_07810 PF04996 Succinylarginine dihydrolase AB285_07815 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AB285_07820 PF07813 LTXXQ motif family protein AB285_07825 PF05962 HutD AB285_07835 PF02540 NAD synthase AB285_07840 PF04355 SmpA / OmlA family AB285_07845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_07850 PF02378 Phosphotransferase system, EIIC AB285_07855 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AB285_07860 PF12833 Helix-turn-helix domain AB285_07860 PF07883 Cupin domain AB285_07865 PF02056 Family 4 glycosyl hydrolase AB285_07865 PF11975 Family 4 glycosyl hydrolase C-terminal domain AB285_07870 PF04794 YdjC-like protein AB285_07875 PF18011 C-terminal domain found in long catalases AB285_07875 PF06628 Catalase-related immune-responsive AB285_07875 PF00199 Catalase AB285_07880 PF10729 Cell division activator CedA AB285_07890 PF04307 LexA-binding, inner membrane-associated putative hydrolase AB285_07900 PF13419 Haloacid dehalogenase-like hydrolase AB285_07905 PF14002 YniB-like protein AB285_07915 PF11080 Endoribonuclease GhoS AB285_07920 PF00294 pfkB family carbohydrate kinase AB285_07925 PF04338 Protein of unknown function, DUF481 AB285_07930 PF07338 Protein of unknown function (DUF1471) AB285_07935 PF02824 TGS domain AB285_07935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB285_07935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB285_07935 PF03129 Anticodon binding domain AB285_07940 PF05198 Translation initiation factor IF-3, N-terminal domain AB285_07940 PF00707 Translation initiation factor IF-3, C-terminal domain AB285_07945 PF01632 Ribosomal protein L35 AB285_07950 PF00453 Ribosomal protein L20 AB285_07955 PF01409 tRNA synthetases class II core domain (F) AB285_07955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AB285_07960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AB285_07960 PF01588 Putative tRNA binding domain AB285_07960 PF03147 Ferredoxin-fold anticodon binding domain AB285_07960 PF03484 tRNA synthetase B5 domain AB285_07960 PF03483 B3/4 domain AB285_07965 PF00216 Bacterial DNA-binding protein AB285_07970 PF01032 FecCD transport family AB285_07975 PF00255 Glutathione peroxidase AB285_07980 PF00005 ABC transporter AB285_07985 PF00877 NlpC/P60 family AB285_07990 PF00563 EAL domain AB285_07995 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AB285_08000 PF00005 ABC transporter AB285_08005 PF01032 FecCD transport family AB285_08010 PF01497 Periplasmic binding protein AB285_08015 PF05171 Haemin-degrading HemS.ChuX domain AB285_08020 PF00593 TonB dependent receptor AB285_08020 PF07715 TonB-dependent Receptor Plug Domain AB285_08025 PF10636 Hemin uptake protein hemP AB285_08030 PF00793 DAHP synthetase I family AB285_08035 PF03618 Kinase/pyrophosphorylase AB285_08040 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AB285_08040 PF00391 PEP-utilising enzyme, mobile domain AB285_08040 PF02896 PEP-utilising enzyme, TIM barrel domain AB285_08050 PF00933 Glycosyl hydrolase family 3 N terminal domain AB285_08050 PF14310 Fibronectin type III-like domain AB285_08050 PF01915 Glycosyl hydrolase family 3 C-terminal domain AB285_08055 PF01594 AI-2E family transporter AB285_08060 PF02913 FAD linked oxidases, C-terminal domain AB285_08060 PF13183 4Fe-4S dicluster domain AB285_08060 PF01565 FAD binding domain AB285_08065 PF03061 Thioesterase superfamily AB285_08070 PF15930 Domain of unknown function AB285_08075 PF15977 Winged helix-turn-helix DNA binding AB285_08080 PF15977 Winged helix-turn-helix DNA binding AB285_08085 PF00419 Fimbrial protein AB285_08090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_08090 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_08095 PF13953 PapC C-terminal domain AB285_08095 PF13954 PapC N-terminal domain AB285_08095 PF00577 Outer membrane usher protein AB285_08115 PF01568 Molydopterin dinucleotide binding domain AB285_08115 PF00384 Molybdopterin oxidoreductase AB285_08115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_08120 PF10798 Biofilm development protein YmgB/AriR AB285_08130 PF10798 Biofilm development protein YmgB/AriR AB285_08135 PF04940 Sensors of blue-light using FAD AB285_08135 PF00563 EAL domain AB285_08140 PF13411 MerR HTH family regulatory protein AB285_08145 PF01521 Iron-sulphur cluster biosynthesis AB285_08150 PF01458 Uncharacterized protein family (UPF0051) AB285_08155 PF00005 ABC transporter AB285_08160 PF01458 Uncharacterized protein family (UPF0051) AB285_08165 PF00266 Aminotransferase class-V AB285_08170 PF02657 Fe-S metabolism associated domain AB285_08175 PF17969 L,D-transpeptidase C-terminal domain AB285_08175 PF01476 LysM domain AB285_08175 PF03734 L,D-transpeptidase catalytic domain AB285_08180 PF04728 Lipoprotein leucine-zipper AB285_08185 PF02887 Pyruvate kinase, alpha/beta domain AB285_08185 PF00224 Pyruvate kinase, barrel domain AB285_08190 PF01053 Cys/Met metabolism PLP-dependent enzyme AB285_08195 PF00571 CBS domain AB285_08195 PF00291 Pyridoxal-phosphate dependent enzyme AB285_08200 PF00005 ABC transporter AB285_08200 PF09383 NIL domain AB285_08205 PF00528 Binding-protein-dependent transport system inner membrane component AB285_08210 PF03180 NLPA lipoprotein AB285_08215 PF10965 Protein of unknown function (DUF2767) AB285_08220 PF00528 Binding-protein-dependent transport system inner membrane component AB285_08225 PF00528 Binding-protein-dependent transport system inner membrane component AB285_08230 PF00005 ABC transporter AB285_08235 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_08260 PF00484 Carbonic anhydrase AB285_08265 PF13454 FAD-NAD(P)-binding AB285_08270 PF08971 Glycogen synthesis protein AB285_08275 PF00011 Hsp20/alpha crystallin family AB285_08290 PF01554 MatE AB285_08295 PF00677 Lumazine binding domain AB285_08305 PF07690 Major Facilitator Superfamily AB285_08310 PF03466 LysR substrate binding domain AB285_08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_08315 PF00356 Bacterial regulatory proteins, lacI family AB285_08325 PF07690 Major Facilitator Superfamily AB285_08330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AB285_08330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AB285_08335 PF00877 NlpC/P60 family AB285_08340 PF00462 Glutaredoxin AB285_08345 PF00929 Exonuclease AB285_08350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB285_08355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB285_08360 PF00440 Bacterial regulatory proteins, tetR family AB285_08360 PF16925 Tetracyclin repressor-like, C-terminal domain AB285_08365 PF00884 Sulfatase AB285_08365 PF08019 Phosphoethanolamine transferase EptA/EptB AB285_08370 PF06945 Protein of unknown function (DUF1289) AB285_08375 PF00248 Aldo/keto reductase family AB285_08380 PF00080 Copper/zinc superoxide dismutase (SODC) AB285_08385 PF04632 Fusaric acid resistance protein family AB285_08390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_08390 PF00529 HlyD membrane-fusion protein of T1SS AB285_08395 PF07869 Protein of unknown function (DUF1656) AB285_08400 PF01047 MarR family AB285_08405 PF00990 Diguanylate cyclase, GGDEF domain AB285_08405 PF17158 Membrane-associated sensor, integral membrane domain AB285_08410 PF05433 Glycine zipper 2TM domain AB285_08415 PF03702 Anhydro-N-acetylmuramic acid kinase AB285_08420 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AB285_08425 PF01243 Pyridoxamine 5'-phosphate oxidase AB285_08425 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AB285_08430 PF01479 S4 domain AB285_08430 PF00579 tRNA synthetases class I (W and Y) AB285_08435 PF08543 Phosphomethylpyrimidine kinase AB285_08440 PF02798 Glutathione S-transferase, N-terminal domain AB285_08440 PF00043 Glutathione S-transferase, C-terminal domain AB285_08450 PF00730 HhH-GPD superfamily base excision DNA repair protein AB285_08450 PF00633 Helix-hairpin-helix motif AB285_08450 PF10576 Iron-sulfur binding domain of endonuclease III AB285_08455 PF02508 Rnf-Nqr subunit, membrane protein AB285_08460 PF04205 FMN-binding domain AB285_08465 PF03116 NQR2, RnfD, RnfE family AB285_08470 PF10531 SLBB domain AB285_08470 PF12838 4Fe-4S dicluster domain AB285_08470 PF13375 RnfC Barrel sandwich hybrid domain AB285_08470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AB285_08475 PF04060 Putative Fe-S cluster AB285_08480 PF02508 Rnf-Nqr subunit, membrane protein AB285_08485 PF10754 Protein of unknown function (DUF2569) AB285_08490 PF05321 Haemolysin expression modulating protein AB285_08500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AB285_08500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_08505 PF00962 Adenosine/AMP deaminase AB285_08510 PF00155 Aminotransferase class I and II AB285_08515 PF00367 phosphotransferase system, EIIB AB285_08515 PF02378 Phosphotransferase system, EIIC AB285_08520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_08520 PF00356 Bacterial regulatory proteins, lacI family AB285_08525 PF06097 Bacterial protein of unknown function (DUF945) AB285_08530 PF01238 Phosphomannose isomerase type I AB285_08535 PF05683 Fumarase C-terminus AB285_08535 PF05681 Fumarate hydratase (Fumerase) AB285_08540 PF00206 Lyase AB285_08540 PF10415 Fumarase C C-terminus AB285_08545 PF05472 DNA replication terminus site-binding protein (Ter protein) AB285_08550 PF00512 His Kinase A (phospho-acceptor) domain AB285_08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_08550 PF00672 HAMP domain AB285_08560 PF00313 'Cold-shock' DNA-binding domain AB285_08570 PF00486 Transcriptional regulatory protein, C terminal AB285_08570 PF00072 Response regulator receiver domain AB285_08575 PF06942 GlpM protein AB285_08585 PF13520 Amino acid permease AB285_08590 PF07338 Protein of unknown function (DUF1471) AB285_08595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AB285_08595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AB285_08595 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AB285_08600 PF02233 NAD(P) transhydrogenase beta subunit AB285_08605 PF00924 Mechanosensitive ion channel AB285_08610 PF00582 Universal stress protein family AB285_08615 PF13545 Crp-like helix-turn-helix domain AB285_08615 PF00027 Cyclic nucleotide-binding domain AB285_08620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB285_08620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB285_08625 PF03806 AbgT putative transporter family AB285_08630 PF01546 Peptidase family M20/M25/M40 AB285_08635 PF01546 Peptidase family M20/M25/M40 AB285_08635 PF07687 Peptidase dimerisation domain AB285_08640 PF03466 LysR substrate binding domain AB285_08640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_08645 PF01713 Smr domain AB285_08650 PF00672 HAMP domain AB285_08650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_08650 PF02203 Tar ligand binding domain homologue AB285_08655 PF00248 Aldo/keto reductase family AB285_08665 PF00717 Peptidase S24-like AB285_08670 PF01011 PQQ enzyme repeat AB285_08670 PF13360 PQQ-like domain AB285_08675 PF00675 Insulinase (Peptidase family M16) AB285_08680 PF13186 Iron-sulfur cluster-binding domain AB285_08680 PF04055 Radical SAM superfamily AB285_08685 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AB285_08690 PF03070 TENA/THI-4/PQQC family AB285_08695 PF12706 Beta-lactamase superfamily domain AB285_08700 PF01244 Membrane dipeptidase (Peptidase family M19) AB285_08705 PF11798 IMS family HHH motif AB285_08705 PF11799 impB/mucB/samB family C-terminal domain AB285_08705 PF00817 impB/mucB/samB family AB285_08705 PF13438 Domain of unknown function (DUF4113) AB285_08715 PF01844 HNH endonuclease AB285_08720 PF02567 Phenazine biosynthesis-like protein AB285_08725 PF00296 Luciferase-like monooxygenase AB285_08735 PF01594 AI-2E family transporter AB285_08740 PF00893 Small Multidrug Resistance protein AB285_08745 PF00893 Small Multidrug Resistance protein AB285_08750 PF00089 Trypsin AB285_08760 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AB285_08765 PF07690 Major Facilitator Superfamily AB285_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_08770 PF03466 LysR substrate binding domain AB285_08775 PF00480 ROK family AB285_08785 PF00654 Voltage gated chloride channel AB285_08790 PF00005 ABC transporter AB285_08790 PF00571 CBS domain AB285_08795 PF00528 Binding-protein-dependent transport system inner membrane component AB285_08800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB285_08805 PF00528 Binding-protein-dependent transport system inner membrane component AB285_08815 PF07690 Major Facilitator Superfamily AB285_08820 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AB285_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_08825 PF03466 LysR substrate binding domain AB285_08830 PF00302 Chloramphenicol acetyltransferase AB285_08840 PF07130 YebG protein AB285_08845 PF02613 Nitrate reductase delta subunit AB285_08850 PF04976 DMSO reductase anchor subunit (DmsC) AB285_08855 PF13247 4Fe-4S dicluster domain AB285_08855 PF12800 4Fe-4S binding domain AB285_08865 PF06649 Protein of unknown function (DUF1161) AB285_08875 PF06788 Uncharacterised protein family (UPF0257) AB285_08880 PF13302 Acetyltransferase (GNAT) domain AB285_08885 PF06932 Protein of unknown function (DUF1283) AB285_08890 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AB285_08895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB285_08895 PF13378 Enolase C-terminal domain-like AB285_08900 PF00107 Zinc-binding dehydrogenase AB285_08900 PF08240 Alcohol dehydrogenase GroES-like domain AB285_08905 PF00083 Sugar (and other) transporter AB285_08905 PF07690 Major Facilitator Superfamily AB285_08910 PF02614 Glucuronate isomerase AB285_08920 PF01232 Mannitol dehydrogenase Rossmann domain AB285_08920 PF08125 Mannitol dehydrogenase C-terminal domain AB285_08925 PF14001 YdfZ protein AB285_08930 PF00582 Universal stress protein family AB285_08935 PF07729 FCD domain AB285_08935 PF00392 Bacterial regulatory proteins, gntR family AB285_08940 PF00106 short chain dehydrogenase AB285_08945 PF01432 Peptidase family M3 AB285_08955 PF00593 TonB dependent receptor AB285_08955 PF07715 TonB-dependent Receptor Plug Domain AB285_08970 PF00528 Binding-protein-dependent transport system inner membrane component AB285_08975 PF06183 DinI-like family AB285_08990 PF01011 PQQ enzyme repeat AB285_09005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB285_09005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB285_09010 PF11739 Dicarboxylate transport AB285_09015 PF13617 YnbE-like lipoprotein AB285_09020 PF07027 Protein of unknown function (DUF1318) AB285_09025 PF14525 AraC-binding-like domain AB285_09025 PF12833 Helix-turn-helix domain AB285_09030 PF00171 Aldehyde dehydrogenase family AB285_09035 PF00360 Phytochrome region AB285_09035 PF00990 Diguanylate cyclase, GGDEF domain AB285_09035 PF01590 GAF domain AB285_09035 PF00563 EAL domain AB285_09040 PF14864 Alkyl sulfatase C-terminal AB285_09040 PF14863 Alkyl sulfatase dimerisation AB285_09040 PF00753 Metallo-beta-lactamase superfamily AB285_09045 PF02727 Copper amine oxidase, N2 domain AB285_09045 PF01179 Copper amine oxidase, enzyme domain AB285_09045 PF07833 Copper amine oxidase N-terminal domain AB285_09045 PF02728 Copper amine oxidase, N3 domain AB285_09065 PF01575 MaoC like domain AB285_09065 PF00171 Aldehyde dehydrogenase family AB285_09070 PF05138 Phenylacetic acid catabolic protein AB285_09075 PF06243 Phenylacetic acid degradation B AB285_09080 PF05138 Phenylacetic acid catabolic protein AB285_09085 PF01883 Iron-sulfur cluster assembly protein AB285_09090 PF00175 Oxidoreductase NAD-binding domain AB285_09090 PF00970 Oxidoreductase FAD-binding domain AB285_09090 PF00111 2Fe-2S iron-sulfur cluster binding domain AB285_09095 PF00378 Enoyl-CoA hydratase/isomerase AB285_09100 PF00378 Enoyl-CoA hydratase/isomerase AB285_09105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB285_09105 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AB285_09105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB285_09110 PF03061 Thioesterase superfamily AB285_09115 PF00108 Thiolase, N-terminal domain AB285_09115 PF02803 Thiolase, C-terminal domain AB285_09120 PF14535 AMP-binding enzyme C-terminal domain AB285_09120 PF00501 AMP-binding enzyme AB285_09125 PF07848 PaaX-like protein AB285_09125 PF08223 PaaX-like protein C-terminal domain AB285_09130 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_09140 PF14863 Alkyl sulfatase dimerisation AB285_09140 PF00753 Metallo-beta-lactamase superfamily AB285_09140 PF14864 Alkyl sulfatase C-terminal AB285_09160 PF00106 short chain dehydrogenase AB285_09205 PF01717 Cobalamin-independent synthase, Catalytic domain AB285_09205 PF08267 Cobalamin-independent synthase, N-terminal domain AB285_09215 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AB285_09220 PF00849 RNA pseudouridylate synthase AB285_09225 PF02525 Flavodoxin-like fold AB285_09230 PF00271 Helicase conserved C-terminal domain AB285_09230 PF11898 Domain of unknown function (DUF3418) AB285_09230 PF04408 Helicase associated domain (HA2) AB285_09230 PF00270 DEAD/DEAH box helicase AB285_09230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AB285_09235 PF02321 Outer membrane efflux protein AB285_09240 PF13533 Biotin-lipoyl like AB285_09250 PF02698 DUF218 domain AB285_09255 PF00171 Aldehyde dehydrogenase family AB285_09260 PF01292 Prokaryotic cytochrome b561 AB285_09265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_09265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AB285_09270 PF00455 DeoR C terminal sensor domain AB285_09270 PF08220 DeoR-like helix-turn-helix domain AB285_09285 PF00664 ABC transporter transmembrane region AB285_09285 PF00005 ABC transporter AB285_09285 PF03412 Peptidase C39 family AB285_09305 PF10798 Biofilm development protein YmgB/AriR AB285_09315 PF10798 Biofilm development protein YmgB/AriR AB285_09335 PF02583 Metal-sensitive transcriptional repressor AB285_09340 PF08240 Alcohol dehydrogenase GroES-like domain AB285_09340 PF00107 Zinc-binding dehydrogenase AB285_09345 PF02203 Tar ligand binding domain homologue AB285_09345 PF00672 HAMP domain AB285_09345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_09350 PF03466 LysR substrate binding domain AB285_09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_09355 PF07063 Domain of unknown function (DUF1338) AB285_09360 PF00135 Carboxylesterase family AB285_09365 PF03466 LysR substrate binding domain AB285_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_09370 PF00155 Aminotransferase class I and II AB285_09375 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_09380 PF04349 Periplasmic glucan biosynthesis protein, MdoG AB285_09385 PF13302 Acetyltransferase (GNAT) domain AB285_09390 PF18836 Beta solenoid repeat from YDCK AB285_09395 PF03595 Voltage-dependent anion channel AB285_09400 PF03848 Tellurite resistance protein TehB AB285_09405 PF01546 Peptidase family M20/M25/M40 AB285_09405 PF07687 Peptidase dimerisation domain AB285_09410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_09415 PF11769 Protein of unknown function (DUF3313) AB285_09430 PF03594 Benzoate membrane transport protein AB285_09435 PF07883 Cupin domain AB285_09435 PF01381 Helix-turn-helix AB285_09440 PF12392 Collagenase AB285_09440 PF01136 Peptidase family U32 AB285_09445 PF10829 Protein of unknown function (DUF2554) AB285_09455 PF01965 DJ-1/PfpI family AB285_09455 PF12833 Helix-turn-helix domain AB285_09465 PF01717 Cobalamin-independent synthase, Catalytic domain AB285_09470 PF00158 Sigma-54 interaction domain AB285_09470 PF02954 Bacterial regulatory protein, Fis family AB285_09470 PF13188 PAS domain AB285_09475 PF02653 Branched-chain amino acid transport system / permease component AB285_09480 PF02653 Branched-chain amino acid transport system / permease component AB285_09485 PF00005 ABC transporter AB285_09490 PF00005 ABC transporter AB285_09495 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AB285_09500 PF07690 Major Facilitator Superfamily AB285_09505 PF00892 EamA-like transporter family AB285_09510 PF13999 MarB protein AB285_09515 PF12833 Helix-turn-helix domain AB285_09520 PF01047 MarR family AB285_09525 PF01914 MarC family integral membrane protein AB285_09535 PF07690 Major Facilitator Superfamily AB285_09540 PF02567 Phenazine biosynthesis-like protein AB285_09545 PF02567 Phenazine biosynthesis-like protein AB285_09550 PF03466 LysR substrate binding domain AB285_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_09555 PF00171 Aldehyde dehydrogenase family AB285_09560 PF00672 HAMP domain AB285_09560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_09560 PF02203 Tar ligand binding domain homologue AB285_09565 PF04960 Glutaminase AB285_09570 PF13811 Domain of unknown function (DUF4186) AB285_09575 PF00990 Diguanylate cyclase, GGDEF domain AB285_09575 PF05230 MASE2 domain AB285_09585 PF08125 Mannitol dehydrogenase C-terminal domain AB285_09585 PF01232 Mannitol dehydrogenase Rossmann domain AB285_09590 PF01062 Bestrophin, RFP-TM, chloride channel AB285_09605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_09605 PF00529 HlyD membrane-fusion protein of T1SS AB285_09610 PF03412 Peptidase C39 family AB285_09610 PF00005 ABC transporter AB285_09610 PF00664 ABC transporter transmembrane region AB285_09620 PF12697 Alpha/beta hydrolase family AB285_09625 PF00486 Transcriptional regulatory protein, C terminal AB285_09625 PF00072 Response regulator receiver domain AB285_09630 PF00672 HAMP domain AB285_09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_09630 PF00512 His Kinase A (phospho-acceptor) domain AB285_09635 PF17991 Thioredoxin like C-terminal domain AB285_09635 PF02683 Cytochrome C biogenesis protein transmembrane region AB285_09635 PF00578 AhpC/TSA family AB285_09640 PF13649 Methyltransferase domain AB285_09645 PF00293 NUDIX domain AB285_09650 PF08220 DeoR-like helix-turn-helix domain AB285_09650 PF00455 DeoR C terminal sensor domain AB285_09660 PF13737 Transposase DDE domain AB285_09670 PF00465 Iron-containing alcohol dehydrogenase AB285_09680 PF13737 Transposase DDE domain AB285_09740 PF00263 Bacterial type II and III secretion system protein AB285_09740 PF03958 Bacterial type II/III secretion system short domain AB285_09785 PF00263 Bacterial type II and III secretion system protein AB285_09785 PF03958 Bacterial type II/III secretion system short domain AB285_09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_09805 PF03466 LysR substrate binding domain AB285_09810 PF07690 Major Facilitator Superfamily AB285_09835 PF00128 Alpha amylase, catalytic domain AB285_09835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AB285_09840 PF00128 Alpha amylase, catalytic domain AB285_09845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AB285_09845 PF00128 Alpha amylase, catalytic domain AB285_09845 PF11941 Domain of unknown function (DUF3459) AB285_09860 PF00753 Metallo-beta-lactamase superfamily AB285_09860 PF16123 Hydroxyacylglutathione hydrolase C-terminus AB285_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_09870 PF03466 LysR substrate binding domain AB285_09875 PF03466 LysR substrate binding domain AB285_09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_09880 PF03466 LysR substrate binding domain AB285_09885 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AB285_09890 PF09905 DNA-binding protein VF530 AB285_09900 PF13098 Thioredoxin-like domain AB285_09915 PF02203 Tar ligand binding domain homologue AB285_09915 PF00672 HAMP domain AB285_09915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_09920 PF00356 Bacterial regulatory proteins, lacI family AB285_09920 PF13407 Periplasmic binding protein domain AB285_09925 PF00251 Glycosyl hydrolases family 32 N-terminal domain AB285_09925 PF08244 Glycosyl hydrolases family 32 C terminal AB285_09930 PF00367 phosphotransferase system, EIIB AB285_09930 PF02378 Phosphotransferase system, EIIC AB285_09935 PF11471 Maltoporin periplasmic N-terminal extension AB285_09935 PF02264 LamB porin AB285_09940 PF00294 pfkB family carbohydrate kinase AB285_09945 PF00563 EAL domain AB285_09945 PF04940 Sensors of blue-light using FAD AB285_09950 PF12146 Serine aminopeptidase, S33 AB285_09955 PF01380 SIS domain AB285_09955 PF01418 Helix-turn-helix domain, rpiR family AB285_09960 PF01427 D-ala-D-ala dipeptidase AB285_09965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_09970 PF00528 Binding-protein-dependent transport system inner membrane component AB285_09975 PF00528 Binding-protein-dependent transport system inner membrane component AB285_09975 PF12911 N-terminal TM domain of oligopeptide transport permease C AB285_09980 PF00005 ABC transporter AB285_09980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_09985 PF00005 ABC transporter AB285_09985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_09995 PF03466 LysR substrate binding domain AB285_09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_10000 PF02566 OsmC-like protein AB285_10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_10005 PF03466 LysR substrate binding domain AB285_10020 PF10684 Putative biofilm-dependent modulation protein AB285_10025 PF08136 30S ribosomal protein subunit S22 family AB285_10030 PF00390 Malic enzyme, N-terminal domain AB285_10030 PF03949 Malic enzyme, NAD binding domain AB285_10035 PF00005 ABC transporter AB285_10035 PF12848 ABC transporter AB285_10040 PF00107 Zinc-binding dehydrogenase AB285_10040 PF08240 Alcohol dehydrogenase GroES-like domain AB285_10050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_10055 PF07690 Major Facilitator Superfamily AB285_10060 PF03976 Polyphosphate kinase 2 (PPK2) AB285_10065 PF01292 Prokaryotic cytochrome b561 AB285_10070 PF13247 4Fe-4S dicluster domain AB285_10070 PF12800 4Fe-4S binding domain AB285_10070 PF09163 Formate dehydrogenase N, transmembrane AB285_10075 PF00384 Molybdopterin oxidoreductase AB285_10075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_10075 PF01568 Molydopterin dinucleotide binding domain AB285_10080 PF01568 Molydopterin dinucleotide binding domain AB285_10080 PF00384 Molybdopterin oxidoreductase AB285_10080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_10085 PF00892 EamA-like transporter family AB285_10090 PF00267 Gram-negative porin AB285_10095 PF07690 Major Facilitator Superfamily AB285_10105 PF07690 Major Facilitator Superfamily AB285_10110 PF00384 Molybdopterin oxidoreductase AB285_10110 PF01568 Molydopterin dinucleotide binding domain AB285_10110 PF14710 Respiratory nitrate reductase alpha N-terminal AB285_10115 PF14711 Respiratory nitrate reductase beta C-terminal AB285_10115 PF13247 4Fe-4S dicluster domain AB285_10120 PF02613 Nitrate reductase delta subunit AB285_10125 PF02665 Nitrate reductase gamma subunit AB285_10130 PF00797 N-acetyltransferase AB285_10135 PF01613 Flavin reductase like domain AB285_10145 PF14492 Elongation Factor G, domain II AB285_10145 PF00679 Elongation factor G C-terminus AB285_10145 PF00009 Elongation factor Tu GTP binding domain AB285_10145 PF03144 Elongation factor Tu domain 2 AB285_10145 PF03764 Elongation factor G, domain IV AB285_10150 PF01022 Bacterial regulatory protein, arsR family AB285_10160 PF03279 Bacterial lipid A biosynthesis acyltransferase AB285_10165 PF01361 Tautomerase enzyme AB285_10170 PF13417 Glutathione S-transferase, N-terminal domain AB285_10180 PF00005 ABC transporter AB285_10185 PF00528 Binding-protein-dependent transport system inner membrane component AB285_10195 PF01464 Transglycosylase SLT domain AB285_10195 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_10200 PF00296 Luciferase-like monooxygenase AB285_10210 PF00296 Luciferase-like monooxygenase AB285_10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_10225 PF03466 LysR substrate binding domain AB285_10230 PF00324 Amino acid permease AB285_10240 PF07715 TonB-dependent Receptor Plug Domain AB285_10240 PF00593 TonB dependent receptor AB285_10245 PF00392 Bacterial regulatory proteins, gntR family AB285_10245 PF07729 FCD domain AB285_10250 PF16884 N-terminal domain of oxidoreductase AB285_10250 PF00107 Zinc-binding dehydrogenase AB285_10255 PF08671 Anti-repressor SinI AB285_10255 PF01381 Helix-turn-helix AB285_10260 PF00583 Acetyltransferase (GNAT) family AB285_10265 PF04657 Putative inner membrane exporter, YdcZ AB285_10270 PF10735 Protein of unknown function (DUF2526) AB285_10275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_10295 PF12146 Serine aminopeptidase, S33 AB285_10300 PF10753 Toxin GhoT_OrtT AB285_10305 PF09313 Domain of unknown function (DUF1971) AB285_10310 PF09313 Domain of unknown function (DUF1971) AB285_10315 PF08956 Domain of unknown function (DUF1869) AB285_10320 PF00171 Aldehyde dehydrogenase family AB285_10325 PF00155 Aminotransferase class I and II AB285_10325 PF00392 Bacterial regulatory proteins, gntR family AB285_10335 PF01654 Cytochrome bd terminal oxidase subunit I AB285_10340 PF02322 Cytochrome bd terminal oxidase subunit II AB285_10350 PF03724 META domain AB285_10355 PF03891 Domain of unknown function (DUF333) AB285_10360 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AB285_10360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_10360 PF10371 Domain of unknown function AB285_10360 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AB285_10360 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AB285_10365 PF00267 Gram-negative porin AB285_10380 PF01171 PP-loop family AB285_10385 PF00270 DEAD/DEAH box helicase AB285_10385 PF03880 DbpA RNA binding domain AB285_10385 PF00271 Helicase conserved C-terminal domain AB285_10390 PF01544 CorA-like Mg2+ transporter protein AB285_10395 PF00672 HAMP domain AB285_10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_10395 PF02203 Tar ligand binding domain homologue AB285_10420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_10425 PF00246 Zinc carboxypeptidase AB285_10430 PF13378 Enolase C-terminal domain-like AB285_10430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB285_10435 PF08534 Redoxin AB285_10440 PF18024 Helix-turn-helix domain AB285_10440 PF00158 Sigma-54 interaction domain AB285_10445 PF05128 Domain of unknown function (DUF697) AB285_10450 PF04317 YcjX-like family, DUF463 AB285_10455 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_10455 PF00356 Bacterial regulatory proteins, lacI family AB285_10460 PF09381 Outer membrane protein G (OmpG) AB285_10465 PF03459 TOBE domain AB285_10465 PF00005 ABC transporter AB285_10465 PF17912 MalK OB fold domain AB285_10470 PF13419 Haloacid dehalogenase-like hydrolase AB285_10475 PF03633 Glycosyl hydrolase family 65, C-terminal domain AB285_10475 PF03632 Glycosyl hydrolase family 65 central catalytic domain AB285_10475 PF03636 Glycosyl hydrolase family 65, N-terminal domain AB285_10480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AB285_10480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_10485 PF01261 Xylose isomerase-like TIM barrel AB285_10490 PF00107 Zinc-binding dehydrogenase AB285_10495 PF00528 Binding-protein-dependent transport system inner membrane component AB285_10500 PF00528 Binding-protein-dependent transport system inner membrane component AB285_10505 PF01547 Bacterial extracellular solute-binding protein AB285_10510 PF00128 Alpha amylase, catalytic domain AB285_10515 PF09584 Phage shock protein PspD (Phageshock_PspD) AB285_10520 PF04024 PspC domain AB285_10525 PF06667 Phage shock protein B AB285_10530 PF04012 PspA/IM30 family AB285_10535 PF00158 Sigma-54 interaction domain AB285_10535 PF02954 Bacterial regulatory protein, Fis family AB285_10540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_10545 PF00528 Binding-protein-dependent transport system inner membrane component AB285_10550 PF00528 Binding-protein-dependent transport system inner membrane component AB285_10550 PF12911 N-terminal TM domain of oligopeptide transport permease C AB285_10555 PF00005 ABC transporter AB285_10555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_10560 PF00005 ABC transporter AB285_10570 PF01042 Endoribonuclease L-PSP AB285_10575 PF12833 Helix-turn-helix domain AB285_10580 PF17158 Membrane-associated sensor, integral membrane domain AB285_10580 PF00990 Diguanylate cyclase, GGDEF domain AB285_10595 PF00773 RNB domain AB285_10595 PF00575 S1 RNA binding domain AB285_10595 PF08206 Ribonuclease B OB domain AB285_10595 PF17876 Cold shock domain AB285_10600 PF13426 PAS domain AB285_10600 PF00563 EAL domain AB285_10600 PF00990 Diguanylate cyclase, GGDEF domain AB285_10605 PF00378 Enoyl-CoA hydratase/isomerase AB285_10615 PF00455 DeoR C terminal sensor domain AB285_10615 PF08220 DeoR-like helix-turn-helix domain AB285_10620 PF05433 Glycine zipper 2TM domain AB285_10625 PF01253 Translation initiation factor SUI1 AB285_10630 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB285_10635 PF18073 Rubredoxin metal binding domain AB285_10640 PF06305 Lipopolysaccharide assembly protein A domain AB285_10645 PF01569 PAP2 superfamily AB285_10650 PF00925 GTP cyclohydrolase II AB285_10655 PF00694 Aconitase C-terminal domain AB285_10655 PF00330 Aconitase family (aconitate hydratase) AB285_10675 PF03466 LysR substrate binding domain AB285_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_10680 PF01751 Toprim domain AB285_10680 PF01131 DNA topoisomerase AB285_10680 PF08272 Topoisomerase I zinc-ribbon-like AB285_10680 PF01396 Topoisomerase DNA binding C4 zinc finger AB285_10685 PF10692 Protein of unknown function (DUF2498) AB285_10690 PF08496 Peptidase family S49 N-terminal AB285_10690 PF01343 Peptidase family S49 AB285_10695 PF00106 short chain dehydrogenase AB285_10700 PF12557 Cob(I)alamin adenosyltransferase N terminal AB285_10700 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AB285_10705 PF01479 S4 domain AB285_10705 PF00849 RNA pseudouridylate synthase AB285_10715 PF13333 Integrase core domain AB285_10715 PF13276 HTH-like domain AB285_10715 PF00665 Integrase core domain AB285_10720 PF01527 Transposase AB285_10780 PF00535 Glycosyl transferase family 2 AB285_10785 PF01300 Telomere recombination AB285_10790 PF02811 PHP domain AB285_10795 PF00425 chorismate binding enzyme AB285_10795 PF04715 Anthranilate synthase component I, N terminal region AB285_10800 PF00117 Glutamine amidotransferase class-I AB285_10800 PF02885 Glycosyl transferase family, helical bundle domain AB285_10800 PF00591 Glycosyl transferase family, a/b domain AB285_10805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AB285_10805 PF00218 Indole-3-glycerol phosphate synthase AB285_10810 PF00291 Pyridoxal-phosphate dependent enzyme AB285_10815 PF00290 Tryptophan synthase alpha chain AB285_10820 PF04143 Sulphur transport AB285_10825 PF01206 Sulfurtransferase TusA AB285_10830 PF03922 OmpW family AB285_10835 PF03692 Putative zinc- or iron-chelating domain AB285_10845 PF04279 Intracellular septation protein A AB285_10850 PF07715 TonB-dependent Receptor Plug Domain AB285_10850 PF00593 TonB dependent receptor AB285_10855 PF03061 Thioesterase superfamily AB285_10860 PF03544 Gram-negative bacterial TonB protein C-terminal AB285_10865 PF03795 YCII-related domain AB285_10870 PF01810 LysE type translocator AB285_10880 PF13091 PLD-like domain AB285_10880 PF13396 Phospholipase_D-nuclease N-terminal AB285_10885 PF04269 Protein of unknown function, DUF440 AB285_10890 PF00027 Cyclic nucleotide-binding domain AB285_10890 PF00520 Ion transport protein AB285_10895 PF00005 ABC transporter AB285_10895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_10900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_10900 PF00005 ABC transporter AB285_10905 PF12911 N-terminal TM domain of oligopeptide transport permease C AB285_10905 PF00528 Binding-protein-dependent transport system inner membrane component AB285_10910 PF00528 Binding-protein-dependent transport system inner membrane component AB285_10915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_10925 PF01914 MarC family integral membrane protein AB285_10930 PF00171 Aldehyde dehydrogenase family AB285_10930 PF00465 Iron-containing alcohol dehydrogenase AB285_10935 PF00265 Thymidine kinase AB285_10940 PF00816 H-NS histone family AB285_10945 PF00483 Nucleotidyl transferase AB285_10950 PF00072 Response regulator receiver domain AB285_10955 PF01734 Patatin-like phospholipase AB285_10960 PF02810 SEC-C motif AB285_10965 PF00551 Formyl transferase AB285_10965 PF01842 ACT domain AB285_10980 PF02665 Nitrate reductase gamma subunit AB285_10985 PF02613 Nitrate reductase delta subunit AB285_10990 PF14711 Respiratory nitrate reductase beta C-terminal AB285_10990 PF13247 4Fe-4S dicluster domain AB285_10995 PF00384 Molybdopterin oxidoreductase AB285_10995 PF01568 Molydopterin dinucleotide binding domain AB285_10995 PF14710 Respiratory nitrate reductase alpha N-terminal AB285_11000 PF07690 Major Facilitator Superfamily AB285_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_11005 PF07730 Histidine kinase AB285_11005 PF00672 HAMP domain AB285_11005 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AB285_11010 PF00072 Response regulator receiver domain AB285_11010 PF00196 Bacterial regulatory proteins, luxR family AB285_11015 PF11924 Inverse autotransporter, beta-domain AB285_11020 PF00384 Molybdopterin oxidoreductase AB285_11020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_11020 PF04324 BFD-like [2Fe-2S] binding domain AB285_11020 PF01568 Molydopterin dinucleotide binding domain AB285_11025 PF04324 BFD-like [2Fe-2S] binding domain AB285_11025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB285_11025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB285_11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_11025 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB285_11025 PF13806 Rieske-like [2Fe-2S] domain AB285_11030 PF00005 ABC transporter AB285_11035 PF00528 Binding-protein-dependent transport system inner membrane component AB285_11045 PF08376 Nitrate and nitrite sensing AB285_11045 PF03861 ANTAR domain AB285_11050 PF02635 DsrE/DsrF-like family AB285_11055 PF02203 Tar ligand binding domain homologue AB285_11055 PF00672 HAMP domain AB285_11055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_11065 PF04752 ChaC-like protein AB285_11070 PF06150 ChaB AB285_11075 PF01699 Sodium/calcium exchanger protein AB285_11080 PF00793 DAHP synthetase I family AB285_11090 PF04247 Invasion gene expression up-regulator, SirB AB285_11095 PF13847 Methyltransferase domain AB285_11095 PF17827 PrmC N-terminal domain AB285_11100 PF03462 PCRF domain AB285_11100 PF00472 RF-1 domain AB285_11105 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AB285_11105 PF01488 Shikimate / quinate 5-dehydrogenase AB285_11105 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AB285_11110 PF03550 Outer membrane lipoprotein LolB AB285_11115 PF08544 GHMP kinases C terminal AB285_11115 PF00288 GHMP kinases N terminal domain AB285_11120 PF14572 Phosphoribosyl synthetase-associated domain AB285_11120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB285_11125 PF01740 STAS domain AB285_11125 PF00916 Sulfate permease family AB285_11135 PF10762 Protein of unknown function (DUF2583) AB285_11140 PF01195 Peptidyl-tRNA hydrolase AB285_11145 PF06071 Protein of unknown function (DUF933) AB285_11145 PF01926 50S ribosome-binding GTPase AB285_11155 PF03527 RHS protein AB285_11155 PF05593 RHS Repeat AB285_11165 PF04717 Type VI secretion system, phage-baseplate injector AB285_11165 PF16671 Actin cross-linking domain AB285_11180 PF00069 Protein kinase domain AB285_11185 PF07724 AAA domain (Cdc48 subfamily) AB285_11185 PF10431 C-terminal, D2-small domain, of ClpB protein AB285_11185 PF17871 AAA lid domain AB285_11185 PF00004 ATPase family associated with various cellular activities (AAA) AB285_11235 PF05638 Type VI secretion system effector, Hcp AB285_11275 PF00691 OmpA family AB285_11275 PF13677 Membrane MotB of proton-channel complex MotA/MotB AB285_11295 PF01965 DJ-1/PfpI family AB285_11295 PF12833 Helix-turn-helix domain AB285_11300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB285_11300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB285_11310 PF01204 Trehalase AB285_11315 PF00593 TonB dependent receptor AB285_11315 PF07715 TonB-dependent Receptor Plug Domain AB285_11320 PF07317 Flagellar regulator YcgR AB285_11320 PF07238 PilZ domain AB285_11325 PF01464 Transglycosylase SLT domain AB285_11330 PF17676 LD-carboxypeptidase C-terminal domain AB285_11330 PF02016 LD-carboxypeptidase N-terminal domain AB285_11335 PF02080 TrkA-C domain AB285_11335 PF00999 Sodium/hydrogen exchanger family AB285_11335 PF03471 Transporter associated domain AB285_11340 PF01168 Alanine racemase, N-terminal domain AB285_11340 PF00842 Alanine racemase, C-terminal domain AB285_11345 PF01266 FAD dependent oxidoreductase AB285_11355 PF04293 SpoVR like protein AB285_11360 PF07840 FadR C-terminal domain AB285_11360 PF00392 Bacterial regulatory proteins, gntR family AB285_11365 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AB285_11370 PF02600 Disulfide bond formation protein DsbB AB285_11375 PF03692 Putative zinc- or iron-chelating domain AB285_11380 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB285_11385 PF05166 YcgL domain AB285_11390 PF03775 Septum formation inhibitor MinC, C-terminal domain AB285_11390 PF05209 Septum formation inhibitor MinC, N-terminal domain AB285_11395 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AB285_11400 PF03776 Septum formation topological specificity factor MinE AB285_11405 PF01612 3'-5' exonuclease AB285_11405 PF00570 HRDC domain AB285_11410 PF13193 AMP-binding enzyme C-terminal domain AB285_11410 PF00501 AMP-binding enzyme AB285_11415 PF03843 Outer membrane lipoprotein Slp family AB285_11420 PF00814 Glycoprotease family AB285_11425 PF04851 Type III restriction enzyme, res subunit AB285_11425 PF13307 Helicase C-terminal domain AB285_11430 PF01042 Endoribonuclease L-PSP AB285_11435 PF03701 Uncharacterised protein family (UPF0181) AB285_11440 PF00425 chorismate binding enzyme AB285_11440 PF04715 Anthranilate synthase component I, N terminal region AB285_11445 PF00293 NUDIX domain AB285_11450 PF03313 Serine dehydratase alpha chain AB285_11450 PF03315 Serine dehydratase beta chain AB285_11455 PF00563 EAL domain AB285_11455 PF12792 CSS motif domain associated with EAL AB285_11460 PF03741 Integral membrane protein TerC family AB285_11460 PF03471 Transporter associated domain AB285_11465 PF03830 PTS system sorbose subfamily IIB component AB285_11465 PF03610 PTS system fructose IIA component AB285_11470 PF03609 PTS system sorbose-specific iic component AB285_11475 PF03613 PTS system mannose/fructose/sorbose family IID component AB285_11480 PF06173 Protein of unknown function (DUF986) AB285_11485 PF02659 Putative manganese efflux pump AB285_11490 PF13847 Methyltransferase domain AB285_11495 PF00905 Penicillin binding protein transpeptidase domain AB285_11495 PF03717 Penicillin-binding Protein dimerisation domain AB285_11500 PF00313 'Cold-shock' DNA-binding domain AB285_11505 PF10736 Protein of unknown function (DUF2627) AB285_11510 PF13974 YebO-like protein AB285_11515 PF13998 MgrB protein AB285_11520 PF13996 YobH-like protein AB285_11525 PF09339 IclR helix-turn-helix domain AB285_11525 PF01614 Bacterial transcriptional regulator AB285_11530 PF07690 Major Facilitator Superfamily AB285_11535 PF01435 Peptidase family M48 AB285_11540 PF03572 Peptidase family S41 AB285_11540 PF17804 Tail specific protease N-terminal domain AB285_11540 PF11818 C-terminal domain of tail specific protease (DUF3340) AB285_11540 PF00595 PDZ domain AB285_11545 PF17516 ProQ C-terminal domain AB285_11545 PF04352 ProQ/FINO family AB285_11550 PF13185 GAF domain AB285_11555 PF04403 Paraquat-inducible protein A AB285_11560 PF02470 MlaD protein AB285_11565 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AB285_11565 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AB285_11565 PF01189 16S rRNA methyltransferase RsmB/F AB285_11570 PF07351 Protein of unknown function (DUF1480) AB285_11575 PF00149 Calcineurin-like phosphoesterase AB285_11580 PF04393 Protein of unknown function (DUF535) AB285_11590 PF10709 Protein of unknown function (DUF2511) AB285_11595 PF05425 Copper resistance protein D AB285_11600 PF04234 CopC domain AB285_11605 PF06440 DNA polymerase III, theta subunit AB285_11610 PF00795 Carbon-nitrogen hydrolase AB285_11615 PF00929 Exonuclease AB285_11620 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AB285_11620 PF00326 Prolyl oligopeptidase family AB285_11625 PF04391 Protein of unknown function (DUF533) AB285_11630 PF02222 ATP-grasp domain AB285_11635 PF01081 KDPG and KHG aldolase AB285_11640 PF00920 Dehydratase family AB285_11645 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AB285_11645 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AB285_11650 PF01380 SIS domain AB285_11650 PF01418 Helix-turn-helix domain, rpiR family AB285_11655 PF00224 Pyruvate kinase, barrel domain AB285_11655 PF02887 Pyruvate kinase, alpha/beta domain AB285_11660 PF03279 Bacterial lipid A biosynthesis acyltransferase AB285_11665 PF01476 LysM domain AB285_11665 PF01551 Peptidase family M23 AB285_11665 PF08525 Opacity-associated protein A N-terminal motif AB285_11670 PF01297 Zinc-uptake complex component A periplasmic AB285_11675 PF00005 ABC transporter AB285_11680 PF00950 ABC 3 transport family AB285_11685 PF17864 RuvB AAA lid domain AB285_11685 PF05496 Holliday junction DNA helicase RuvB P-loop domain AB285_11685 PF05491 RuvB C-terminal winged helix domain AB285_11690 PF01330 RuvA N terminal domain AB285_11690 PF07499 RuvA, C-terminal domain AB285_11695 PF02075 Crossover junction endodeoxyribonuclease RuvC AB285_11700 PF01709 Transcriptional regulator AB285_11705 PF00293 NUDIX domain AB285_11710 PF01336 OB-fold nucleic acid binding domain AB285_11710 PF00152 tRNA synthetases class II (D, K and N) AB285_11710 PF02938 GAD domain AB285_11715 PF00857 Isochorismatase family AB285_11720 PF01904 Protein of unknown function DUF72 AB285_11725 PF01124 MAPEG family AB285_11730 PF13649 Methyltransferase domain AB285_11735 PF08003 Protein of unknown function (DUF1698) AB285_11740 PF03932 CutC family AB285_11745 PF06185 YecM protein AB285_11750 PF00750 tRNA synthetases class I (R) AB285_11750 PF03485 Arginyl tRNA synthetase N terminal domain AB285_11750 PF05746 DALR anticodon binding domain AB285_11755 PF07470 Glycosyl Hydrolase Family 88 AB285_11765 PF06366 Flagellar protein FlhE AB285_11770 PF00771 FHIPEP family AB285_11775 PF01312 FlhB HrpN YscU SpaS Family AB285_11780 PF04344 Chemotaxis phosphatase, CheZ AB285_11785 PF00072 Response regulator receiver domain AB285_11790 PF01339 CheB methylesterase AB285_11790 PF00072 Response regulator receiver domain AB285_11795 PF03705 CheR methyltransferase, all-alpha domain AB285_11795 PF01739 CheR methyltransferase, SAM binding domain AB285_11800 PF00672 HAMP domain AB285_11800 PF02203 Tar ligand binding domain homologue AB285_11800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_11805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_11805 PF02203 Tar ligand binding domain homologue AB285_11805 PF00672 HAMP domain AB285_11835 PF00375 Sodium:dicarboxylate symporter family AB285_11840 PF01584 CheW-like domain AB285_11845 PF02895 Signal transducing histidine kinase, homodimeric domain AB285_11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_11845 PF01627 Hpt domain AB285_11845 PF01584 CheW-like domain AB285_11845 PF09078 CheY binding AB285_11850 PF13677 Membrane MotB of proton-channel complex MotA/MotB AB285_11850 PF00691 OmpA family AB285_11855 PF01618 MotA/TolQ/ExbB proton channel family AB285_11860 PF05280 Flagellar transcriptional activator (FlhC) AB285_11865 PF05247 Flagellar transcriptional activator (FlhD) AB285_11870 PF00582 Universal stress protein family AB285_11875 PF00982 Glycosyltransferase family 20 AB285_11880 PF02358 Trehalose-phosphatase AB285_11885 PF02653 Branched-chain amino acid transport system / permease component AB285_11890 PF00005 ABC transporter AB285_11895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_11905 PF00210 Ferritin-like domain AB285_11910 PF03605 Anaerobic c4-dicarboxylate membrane transporter AB285_11915 PF10964 Protein of unknown function (DUF2766) AB285_11920 PF07690 Major Facilitator Superfamily AB285_11935 PF00210 Ferritin-like domain AB285_11940 PF10678 Protein of unknown function (DUF2492) AB285_11945 PF03222 Tryptophan/tyrosine permease family AB285_11950 PF02810 SEC-C motif AB285_11950 PF03695 Uncharacterised protein family (UPF0149) AB285_11955 PF13458 Periplasmic binding protein AB285_11960 PF02653 Branched-chain amino acid transport system / permease component AB285_11965 PF02653 Branched-chain amino acid transport system / permease component AB285_11965 PF11862 Domain of unknown function (DUF3382) AB285_11970 PF12399 Branched-chain amino acid ATP-binding cassette transporter AB285_11970 PF00005 ABC transporter AB285_11975 PF00005 ABC transporter AB285_11985 PF03466 LysR substrate binding domain AB285_11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_12025 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AB285_12030 PF03335 Phage tail fibre repeat AB285_12030 PF07484 Phage Tail Collar Domain AB285_12085 PF17482 Phage tail sheath C-terminal domain AB285_12085 PF04984 Phage tail sheath protein subtilisin-like domain AB285_12115 PF00574 Clp protease AB285_12170 PF00182 Chitinase class I AB285_12195 PF00145 C-5 cytosine-specific DNA methylase AB285_12230 PF07789 Protein of unknown function (DUF1627) AB285_12235 PF01695 IstB-like ATP binding protein AB285_12300 PF01066 CDP-alcohol phosphatidyltransferase AB285_12305 PF02151 UvrB/uvrC motif AB285_12305 PF08459 UvrC Helix-hairpin-helix N-terminal AB285_12305 PF01541 GIY-YIG catalytic domain AB285_12310 PF00196 Bacterial regulatory proteins, luxR family AB285_12310 PF00072 Response regulator receiver domain AB285_12315 PF10769 Protein of unknown function (DUF2594) AB285_12320 PF03472 Autoinducer binding domain AB285_12320 PF00196 Bacterial regulatory proteins, luxR family AB285_12335 PF00291 Pyridoxal-phosphate dependent enzyme AB285_12345 PF02899 Phage integrase, N-terminal SAM-like domain AB285_12350 PF04542 Sigma-70 region 2 AB285_12350 PF04539 Sigma-70 region 3 AB285_12350 PF04545 Sigma-70, region 4 AB285_12355 PF00700 Bacterial flagellin C-terminal helical region AB285_12355 PF00669 Bacterial flagellin N-terminal helical region AB285_12360 PF02465 Flagellar hook-associated protein 2 N-terminus AB285_12360 PF07195 Flagellar hook-associated protein 2 C-terminus AB285_12365 PF02561 Flagellar protein FliS AB285_12370 PF05400 Flagellar protein FliT AB285_12375 PF00128 Alpha amylase, catalytic domain AB285_12375 PF02806 Alpha amylase, C-terminal all-beta domain AB285_12380 PF13987 YedD-like protein AB285_12385 PF02049 Flagellar hook-basal body complex protein FliE AB285_12390 PF08345 Flagellar M-ring protein C-terminal AB285_12390 PF01514 Secretory protein of YscJ/FliF family AB285_12395 PF01706 FliG C-terminal domain AB285_12395 PF14841 FliG middle domain AB285_12395 PF14842 FliG N-terminal domain AB285_12400 PF02108 Flagellar assembly protein FliH AB285_12405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB285_12405 PF18269 T3SS EscN ATPase C-terminal domain AB285_12410 PF02050 Flagellar FliJ protein AB285_12415 PF02120 Flagellar hook-length control protein FliK AB285_12420 PF03748 Flagellar basal body-associated protein FliL AB285_12425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AB285_12425 PF02154 Flagellar motor switch protein FliM AB285_12430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AB285_12430 PF16973 Flagellar motor switch protein FliN N-terminal AB285_12435 PF04347 Flagellar biosynthesis protein, FliO AB285_12440 PF00813 FliP family AB285_12445 PF01313 Bacterial export proteins, family 3 AB285_12450 PF01311 Bacterial export proteins, family 1 AB285_12455 PF00196 Bacterial regulatory proteins, luxR family AB285_12460 PF10781 Dextransucrase DSRB AB285_12465 PF10733 Protein of unknown function (DUF2525) AB285_12475 PF00990 Diguanylate cyclase, GGDEF domain AB285_12475 PF17151 Periplasmic sensor domain AB285_12480 PF09926 Uncharacterized small protein (DUF2158) AB285_12485 PF05661 Protein of unknown function (DUF808) AB285_12490 PF00892 EamA-like transporter family AB285_12495 PF03852 DNA mismatch endonuclease Vsr AB285_12500 PF18284 DNA methylase N-terminal domain AB285_12500 PF00145 C-5 cytosine-specific DNA methylase AB285_12505 PF01966 HD domain AB285_12510 PF00267 Gram-negative porin AB285_12515 PF13580 SIS domain AB285_12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_12520 PF00989 PAS fold AB285_12520 PF17203 Single cache domain 3 AB285_12520 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AB285_12525 PF00072 Response regulator receiver domain AB285_12530 PF02424 ApbE family AB285_12535 PF14537 Cytochrome c3 AB285_12535 PF00890 FAD binding domain AB285_12540 PF00939 Sodium:sulfate symporter transmembrane region AB285_12545 PF05681 Fumarate hydratase (Fumerase) AB285_12545 PF05683 Fumarase C-terminus AB285_12555 PF00144 Beta-lactamase AB285_12560 PF07690 Major Facilitator Superfamily AB285_12570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_12570 PF03466 LysR substrate binding domain AB285_12575 PF06167 Glucose-regulated metallo-peptidase M90 AB285_12585 PF04183 IucA / IucC family AB285_12585 PF06276 Ferric iron reductase FhuF-like transporter AB285_12595 PF06276 Ferric iron reductase FhuF-like transporter AB285_12595 PF04183 IucA / IucC family AB285_12600 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AB285_12605 PF00593 TonB dependent receptor AB285_12605 PF07715 TonB-dependent Receptor Plug Domain AB285_12615 PF01381 Helix-turn-helix AB285_12620 PF05973 Phage derived protein Gp49-like (DUF891) AB285_12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_12625 PF03466 LysR substrate binding domain AB285_12630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_12630 PF03466 LysR substrate binding domain AB285_12640 PF17969 L,D-transpeptidase C-terminal domain AB285_12640 PF03734 L,D-transpeptidase catalytic domain AB285_12645 PF00689 Cation transporting ATPase, C-terminus AB285_12645 PF00690 Cation transporter/ATPase, N-terminus AB285_12650 PF00582 Universal stress protein family AB285_12655 PF13533 Biotin-lipoyl like AB285_12660 PF00873 AcrB/AcrD/AcrF family AB285_12670 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AB285_12675 PF00083 Sugar (and other) transporter AB285_12675 PF07690 Major Facilitator Superfamily AB285_12680 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AB285_12680 PF01048 Phosphorylase superfamily AB285_12690 PF01554 MatE AB285_12700 PF04363 Protein of unknown function (DUF496) AB285_12705 PF04632 Fusaric acid resistance protein family AB285_12710 PF06445 GyrI-like small molecule binding domain AB285_12715 PF07943 Penicillin-binding protein 5, C-terminal domain AB285_12715 PF00768 D-alanyl-D-alanine carboxypeptidase AB285_12720 PF08411 Exonuclease C-terminal AB285_12720 PF00929 Exonuclease AB285_12725 PF13520 Amino acid permease AB285_12730 PF03466 LysR substrate binding domain AB285_12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_12735 PF01370 NAD dependent epimerase/dehydratase family AB285_12740 PF01634 ATP phosphoribosyltransferase AB285_12740 PF08029 HisG, C-terminal domain AB285_12745 PF00815 Histidinol dehydrogenase AB285_12750 PF00155 Aminotransferase class I and II AB285_12755 PF00475 Imidazoleglycerol-phosphate dehydratase AB285_12760 PF00117 Glutamine amidotransferase class-I AB285_12765 PF00977 Histidine biosynthesis protein AB285_12770 PF00977 Histidine biosynthesis protein AB285_12775 PF01502 Phosphoribosyl-AMP cyclohydrolase AB285_12775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AB285_12780 PF02706 Chain length determinant protein AB285_12785 PF01370 NAD dependent epimerase/dehydratase family AB285_12790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB285_12790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB285_12790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB285_12795 PF00483 Nucleotidyl transferase AB285_12800 PF16363 GDP-mannose 4,6 dehydratase AB285_12805 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AB285_12805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB285_12810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB285_12810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB285_12810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB285_12810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB285_12815 PF01050 Mannose-6-phosphate isomerase AB285_12815 PF00483 Nucleotidyl transferase AB285_12820 PF00534 Glycosyl transferases group 1 AB285_12820 PF00862 Sucrose synthase AB285_12840 PF01501 Glycosyl transferase family 8 AB285_12840 PF00535 Glycosyl transferase family 2 AB285_12845 PF01943 Polysaccharide biosynthesis protein AB285_12850 PF00483 Nucleotidyl transferase AB285_12860 PF13439 Glycosyltransferase Family 4 AB285_12860 PF00534 Glycosyl transferases group 1 AB285_12865 PF04230 Polysaccharide pyruvyl transferase AB285_12875 PF02397 Bacterial sugar transferase AB285_12880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB285_12880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB285_12880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB285_12880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB285_12885 PF01050 Mannose-6-phosphate isomerase AB285_12885 PF00483 Nucleotidyl transferase AB285_12890 PF13579 Glycosyl transferase 4-like domain AB285_12890 PF00534 Glycosyl transferases group 1 AB285_12895 PF00293 NUDIX domain AB285_12900 PF01370 NAD dependent epimerase/dehydratase family AB285_12905 PF16363 GDP-mannose 4,6 dehydratase AB285_12910 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_12915 PF00535 Glycosyl transferase family 2 AB285_12925 PF00534 Glycosyl transferases group 1 AB285_12925 PF13439 Glycosyltransferase Family 4 AB285_12930 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_12935 PF00535 Glycosyl transferase family 2 AB285_12940 PF02706 Chain length determinant protein AB285_12940 PF13614 AAA domain AB285_12940 PF13807 G-rich domain on putative tyrosine kinase AB285_12945 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB285_12950 PF02563 Polysaccharide biosynthesis/export protein AB285_12950 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AB285_12950 PF10531 SLBB domain AB285_12955 PF03471 Transporter associated domain AB285_12955 PF00571 CBS domain AB285_12955 PF03741 Integral membrane protein TerC family AB285_12960 PF05170 AsmA family AB285_12965 PF00692 dUTPase AB285_12970 PF00485 Phosphoribulokinase / Uridine kinase family AB285_12975 PF00563 EAL domain AB285_12975 PF13426 PAS domain AB285_12975 PF08448 PAS fold AB285_12975 PF08447 PAS fold AB285_12975 PF05231 MASE1 AB285_12975 PF00990 Diguanylate cyclase, GGDEF domain AB285_12980 PF00730 HhH-GPD superfamily base excision DNA repair protein AB285_12980 PF06029 AlkA N-terminal domain AB285_12985 PF00012 Hsp70 protein AB285_12990 PF13533 Biotin-lipoyl like AB285_12995 PF00873 AcrB/AcrD/AcrF family AB285_13000 PF00873 AcrB/AcrD/AcrF family AB285_13005 PF07690 Major Facilitator Superfamily AB285_13010 PF00672 HAMP domain AB285_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_13010 PF00512 His Kinase A (phospho-acceptor) domain AB285_13015 PF00486 Transcriptional regulatory protein, C terminal AB285_13015 PF00072 Response regulator receiver domain AB285_13030 PF00781 Diacylglycerol kinase catalytic domain AB285_13035 PF00005 ABC transporter AB285_13035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_13040 PF00005 ABC transporter AB285_13040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_13050 PF00528 Binding-protein-dependent transport system inner membrane component AB285_13055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_13060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB285_13060 PF13378 Enolase C-terminal domain-like AB285_13065 PF13419 Haloacid dehalogenase-like hydrolase AB285_13070 PF07690 Major Facilitator Superfamily AB285_13075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_13075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_13080 PF08125 Mannitol dehydrogenase C-terminal domain AB285_13080 PF01232 Mannitol dehydrogenase Rossmann domain AB285_13085 PF00325 Bacterial regulatory proteins, crp family AB285_13085 PF04198 Putative sugar-binding domain AB285_13090 PF00356 Bacterial regulatory proteins, lacI family AB285_13095 PF00106 short chain dehydrogenase AB285_13100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_13100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_13105 PF07690 Major Facilitator Superfamily AB285_13110 PF01791 DeoC/LacD family aldolase AB285_13115 PF03825 Nucleoside H+ symporter AB285_13120 PF03747 ADP-ribosylglycohydrolase AB285_13125 PF00294 pfkB family carbohydrate kinase AB285_13130 PF07702 UTRA domain AB285_13130 PF00392 Bacterial regulatory proteins, gntR family AB285_13135 PF08543 Phosphomethylpyrimidine kinase AB285_13140 PF02110 Hydroxyethylthiazole kinase family AB285_13155 PF00202 Aminotransferase class-III AB285_13160 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB285_13165 PF13807 G-rich domain on putative tyrosine kinase AB285_13165 PF02706 Chain length determinant protein AB285_13165 PF13614 AAA domain AB285_13170 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB285_13175 PF10531 SLBB domain AB285_13175 PF02563 Polysaccharide biosynthesis/export protein AB285_13175 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AB285_13180 PF11776 Nickel/cobalt transporter regulator AB285_13190 PF10609 NUBPL iron-transfer P-loop NTPase AB285_13195 PF01588 Putative tRNA binding domain AB285_13195 PF09334 tRNA synthetases class I (M) AB285_13200 PF07308 Protein of unknown function (DUF1456) AB285_13205 PF04397 LytTr DNA-binding domain AB285_13205 PF00072 Response regulator receiver domain AB285_13210 PF06580 Histidine kinase AB285_13210 PF07694 5TMR of 5TMR-LYT AB285_13215 PF13411 MerR HTH family regulatory protein AB285_13220 PF00528 Binding-protein-dependent transport system inner membrane component AB285_13225 PF00005 ABC transporter AB285_13230 PF00528 Binding-protein-dependent transport system inner membrane component AB285_13235 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB285_13240 PF14310 Fibronectin type III-like domain AB285_13240 PF01915 Glycosyl hydrolase family 3 C-terminal domain AB285_13240 PF00933 Glycosyl hydrolase family 3 N terminal domain AB285_13245 PF09330 D-lactate dehydrogenase, membrane binding AB285_13245 PF01565 FAD binding domain AB285_13255 PF00768 D-alanyl-D-alanine carboxypeptidase AB285_13260 PF04893 Yip1 domain AB285_13265 PF09335 SNARE associated Golgi protein AB285_13275 PF02321 Outer membrane efflux protein AB285_13280 PF01207 Dihydrouridine synthase (Dus) AB285_13285 PF03788 LrgA family AB285_13290 PF04172 LrgB-like family AB285_13295 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AB285_13295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB285_13300 PF02698 DUF218 domain AB285_13305 PF02653 Branched-chain amino acid transport system / permease component AB285_13310 PF00005 ABC transporter AB285_13315 PF13407 Periplasmic binding protein domain AB285_13320 PF00356 Bacterial regulatory proteins, lacI family AB285_13325 PF04235 Protein of unknown function (DUF418) AB285_13330 PF01227 GTP cyclohydrolase I AB285_13335 PF06779 Uncharacterised MFS-type transporter YbfB AB285_13340 PF00756 Putative esterase AB285_13345 PF07715 TonB-dependent Receptor Plug Domain AB285_13345 PF00593 TonB dependent receptor AB285_13350 PF00324 Amino acid permease AB285_13355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_13355 PF03466 LysR substrate binding domain AB285_13360 PF03601 Conserved hypothetical protein 698 AB285_13365 PF01261 Xylose isomerase-like TIM barrel AB285_13370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_13370 PF02378 Phosphotransferase system, EIIC AB285_13375 PF00294 pfkB family carbohydrate kinase AB285_13380 PF00381 PTS HPr component phosphorylation site AB285_13380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_13385 PF07690 Major Facilitator Superfamily AB285_13390 PF03692 Putative zinc- or iron-chelating domain AB285_13395 PF01132 Elongation factor P (EF-P) OB domain AB285_13395 PF09285 Elongation factor P, C-terminal AB285_13395 PF08207 Elongation factor P (EF-P) KOW-like domain AB285_13400 PF03786 D-mannonate dehydratase (UxuA) AB285_13405 PF01232 Mannitol dehydrogenase Rossmann domain AB285_13405 PF08125 Mannitol dehydrogenase C-terminal domain AB285_13410 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB285_13410 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB285_13415 PF01569 PAP2 superfamily AB285_13420 PF00877 NlpC/P60 family AB285_13425 PF00563 EAL domain AB285_13425 PF12792 CSS motif domain associated with EAL AB285_13430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_13435 PF00528 Binding-protein-dependent transport system inner membrane component AB285_13440 PF00528 Binding-protein-dependent transport system inner membrane component AB285_13440 PF12911 N-terminal TM domain of oligopeptide transport permease C AB285_13445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_13445 PF00005 ABC transporter AB285_13450 PF13989 YejG-like protein AB285_13455 PF07690 Major Facilitator Superfamily AB285_13460 PF01479 S4 domain AB285_13460 PF00849 RNA pseudouridylate synthase AB285_13465 PF00271 Helicase conserved C-terminal domain AB285_13465 PF04851 Type III restriction enzyme, res subunit AB285_13470 PF01386 Ribosomal L25p family AB285_13475 PF04245 37-kD nucleoid-associated bacterial protein AB285_13480 PF07208 Protein of unknown function (DUF1414) AB285_13485 PF11893 Domain of unknown function (DUF3413) AB285_13485 PF00884 Sulfatase AB285_13495 PF10749 Protein of unknown function (DUF2534) AB285_13500 PF03974 Ecotin AB285_13505 PF06039 Malate:quinone oxidoreductase (Mqo) AB285_13510 PF01740 STAS domain AB285_13510 PF00916 Sulfate permease family AB285_13515 PF03448 MgtE intracellular N domain AB285_13515 PF00571 CBS domain AB285_13515 PF01769 Divalent cation transporter AB285_13520 PF00005 ABC transporter AB285_13525 PF13532 2OG-Fe(II) oxygenase superfamily AB285_13530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB285_13530 PF12833 Helix-turn-helix domain AB285_13530 PF02805 Metal binding domain of Ada AB285_13530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB285_13535 PF02424 ApbE family AB285_13540 PF00267 Gram-negative porin AB285_13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_13545 PF01627 Hpt domain AB285_13545 PF16359 RcsD-ABL domain AB285_13550 PF00196 Bacterial regulatory proteins, luxR family AB285_13550 PF00072 Response regulator receiver domain AB285_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_13555 PF00512 His Kinase A (phospho-acceptor) domain AB285_13555 PF09456 RcsC Alpha-Beta-Loop (ABL) AB285_13555 PF00072 Response regulator receiver domain AB285_13560 PF00521 DNA gyrase/topoisomerase IV, subunit A AB285_13560 PF03989 DNA gyrase C-terminal domain, beta-propeller AB285_13570 PF02867 Ribonucleotide reductase, barrel domain AB285_13570 PF03477 ATP cone domain AB285_13570 PF00317 Ribonucleotide reductase, all-alpha domain AB285_13575 PF00268 Ribonucleotide reductase, small chain AB285_13580 PF00111 2Fe-2S iron-sulfur cluster binding domain AB285_13585 PF03009 Glycerophosphoryl diester phosphodiesterase family AB285_13590 PF07690 Major Facilitator Superfamily AB285_13595 PF04324 BFD-like [2Fe-2S] binding domain AB285_13595 PF01266 FAD dependent oxidoreductase AB285_13600 PF00890 FAD binding domain AB285_13605 PF13183 4Fe-4S dicluster domain AB285_13605 PF02754 Cysteine-rich domain AB285_13610 PF00994 Probable molybdopterin binding domain AB285_13615 PF07437 YfaZ precursor AB285_13620 PF08521 Two-component sensor kinase N-terminal AB285_13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_13620 PF00512 His Kinase A (phospho-acceptor) domain AB285_13625 PF00486 Transcriptional regulatory protein, C terminal AB285_13625 PF00072 Response regulator receiver domain AB285_13640 PF01970 Tripartite tricarboxylate transporter TctA family AB285_13645 PF00501 AMP-binding enzyme AB285_13645 PF13193 AMP-binding enzyme C-terminal domain AB285_13650 PF13378 Enolase C-terminal domain-like AB285_13655 PF00378 Enoyl-CoA hydratase/isomerase AB285_13660 PF12697 Alpha/beta hydrolase family AB285_13665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_13665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_13665 PF16582 Middle domain of thiamine pyrophosphate AB285_13670 PF00425 chorismate binding enzyme AB285_13675 PF05957 Bacterial protein of unknown function (DUF883) AB285_13680 PF13673 Acetyltransferase (GNAT) domain AB285_13685 PF12706 Beta-lactamase superfamily domain AB285_13690 PF00072 Response regulator receiver domain AB285_13690 PF01584 CheW-like domain AB285_13695 PF00361 Proton-conducting membrane transporter AB285_13700 PF00361 Proton-conducting membrane transporter AB285_13705 PF00361 Proton-conducting membrane transporter AB285_13705 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AB285_13710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AB285_13715 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AB285_13720 PF12838 4Fe-4S dicluster domain AB285_13725 PF00146 NADH dehydrogenase AB285_13730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_13730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB285_13730 PF01568 Molydopterin dinucleotide binding domain AB285_13730 PF00384 Molybdopterin oxidoreductase AB285_13735 PF10531 SLBB domain AB285_13735 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB285_13735 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AB285_13745 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AB285_13745 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AB285_13750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AB285_13755 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AB285_13760 PF03466 LysR substrate binding domain AB285_13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_13765 PF00155 Aminotransferase class I and II AB285_13775 PF02080 TrkA-C domain AB285_13775 PF03600 Citrate transporter AB285_13780 PF13419 Haloacid dehalogenase-like hydrolase AB285_13785 PF03887 YfbU domain AB285_13790 PF04217 Protein of unknown function, DUF412 AB285_13795 PF00871 Acetokinase family AB285_13800 PF07085 DRTGG domain AB285_13800 PF01515 Phosphate acetyl/butaryl transferase AB285_13805 PF02780 Transketolase, C-terminal domain AB285_13805 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AB285_13805 PF02779 Transketolase, pyrimidine binding domain AB285_13810 PF00456 Transketolase, thiamine diphosphate binding domain AB285_13815 PF03611 PTS system sugar-specific permease component AB285_13825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_13830 PF00356 Bacterial regulatory proteins, lacI family AB285_13835 PF00293 NUDIX domain AB285_13840 PF12850 Calcineurin-like phosphoesterase superfamily domain AB285_13845 PF02798 Glutathione S-transferase, N-terminal domain AB285_13845 PF14834 Glutathione S-transferase, C-terminal domain AB285_13850 PF02798 Glutathione S-transferase, N-terminal domain AB285_13850 PF00043 Glutathione S-transferase, C-terminal domain AB285_13855 PF02152 Dihydroneopterin aldolase AB285_13860 PF08338 Domain of unknown function (DUF1731) AB285_13860 PF01370 NAD dependent epimerase/dehydratase family AB285_13865 PF13302 Acetyltransferase (GNAT) domain AB285_13870 PF00005 ABC transporter AB285_13875 PF00528 Binding-protein-dependent transport system inner membrane component AB285_13880 PF00528 Binding-protein-dependent transport system inner membrane component AB285_13885 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_13890 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_13895 PF02441 Flavoprotein AB285_13900 PF00156 Phosphoribosyl transferase domain AB285_13905 PF02674 Colicin V production protein AB285_13910 PF05036 Sporulation related domain AB285_13915 PF08245 Mur ligase middle domain AB285_13915 PF02875 Mur ligase family, glutamate ligase domain AB285_13920 PF17848 Acetyl-coA carboxylase zinc finger domain AB285_13920 PF01039 Carboxyl transferase domain AB285_13925 PF09335 SNARE associated Golgi protein AB285_13930 PF01416 tRNA pseudouridine synthase AB285_13935 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB285_13935 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB285_13940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB285_13940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB285_13940 PF11890 Domain of unknown function (DUF3410) AB285_13950 PF07690 Major Facilitator Superfamily AB285_13955 PF02801 Beta-ketoacyl synthase, C-terminal domain AB285_13955 PF00109 Beta-ketoacyl synthase, N-terminal domain AB285_13960 PF01266 FAD dependent oxidoreductase AB285_13960 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AB285_13965 PF08891 YfcL protein AB285_13970 PF04315 Elongation factor P hydroxylase AB285_13975 PF01925 Sulfite exporter TauE/SafE AB285_13980 PF03411 Penicillin-insensitive murein endopeptidase AB285_13985 PF01264 Chorismate synthase AB285_13990 PF05175 Methyltransferase small domain AB285_13995 PF01713 Smr domain AB285_14000 PF00300 Histidine phosphatase superfamily (branch 1) AB285_14005 PF00378 Enoyl-CoA hydratase/isomerase AB285_14005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB285_14005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB285_14010 PF02803 Thiolase, C-terminal domain AB285_14010 PF00108 Thiolase, N-terminal domain AB285_14015 PF04175 Protein of unknown function (DUF406) AB285_14020 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AB285_14025 PF04333 MlaA lipoprotein AB285_14030 PF01226 Formate/nitrite transporter AB285_14040 PF00990 Diguanylate cyclase, GGDEF domain AB285_14045 PF03279 Bacterial lipid A biosynthesis acyltransferase AB285_14055 PF00155 Aminotransferase class I and II AB285_14060 PF07694 5TMR of 5TMR-LYT AB285_14060 PF06580 Histidine kinase AB285_14060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_14065 PF04397 LytTr DNA-binding domain AB285_14065 PF00072 Response regulator receiver domain AB285_14070 PF02685 Glucokinase AB285_14075 PF00654 Voltage gated chloride channel AB285_14080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_14080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_14080 PF00205 Thiamine pyrophosphate enzyme, central domain AB285_14085 PF00248 Aldo/keto reductase family AB285_14095 PF01566 Natural resistance-associated macrophage protein AB285_14100 PF07670 Nucleoside recognition AB285_14100 PF07662 Na+ dependent nucleoside transporter C-terminus AB285_14100 PF01773 Na+ dependent nucleoside transporter N-terminus AB285_14105 PF00563 EAL domain AB285_14105 PF05231 MASE1 AB285_14120 PF07037 Putative transcription regulator (DUF1323) AB285_14125 PF07037 Putative transcription regulator (DUF1323) AB285_14130 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB285_14165 PF03466 LysR substrate binding domain AB285_14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_14170 PF13593 SBF-like CPA transporter family (DUF4137) AB285_14175 PF12843 Putative quorum-sensing-regulated virulence factor AB285_14180 PF12826 Helix-hairpin-helix motif AB285_14180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AB285_14180 PF03120 NAD-dependent DNA ligase OB-fold domain AB285_14180 PF00533 BRCA1 C Terminus (BRCT) domain AB285_14180 PF01653 NAD-dependent DNA ligase adenylation domain AB285_14185 PF04354 ZipA, C-terminal FtsZ-binding domain AB285_14195 PF00291 Pyridoxal-phosphate dependent enzyme AB285_14200 PF00381 PTS HPr component phosphorylation site AB285_14205 PF05524 PEP-utilising enzyme, N-terminal AB285_14205 PF00391 PEP-utilising enzyme, mobile domain AB285_14205 PF02896 PEP-utilising enzyme, TIM barrel domain AB285_14210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB285_14215 PF08543 Phosphomethylpyrimidine kinase AB285_14220 PF00291 Pyridoxal-phosphate dependent enzyme AB285_14225 PF00005 ABC transporter AB285_14230 PF00528 Binding-protein-dependent transport system inner membrane component AB285_14235 PF00528 Binding-protein-dependent transport system inner membrane component AB285_14245 PF04261 Dyp-type peroxidase family AB285_14250 PF06572 Protein of unknown function (DUF1131) AB285_14255 PF11143 Protein of unknown function (DUF2919) AB285_14260 PF00583 Acetyltransferase (GNAT) family AB285_14265 PF01520 N-acetylmuramoyl-L-alanine amidase AB285_14270 PF01218 Coproporphyrinogen III oxidase AB285_14275 PF01515 Phosphate acetyl/butaryl transferase AB285_14275 PF03949 Malic enzyme, NAD binding domain AB285_14275 PF00390 Malic enzyme, N-terminal domain AB285_14280 PF00923 Transaldolase/Fructose-6-phosphate aldolase AB285_14285 PF02779 Transketolase, pyrimidine binding domain AB285_14285 PF00456 Transketolase, thiamine diphosphate binding domain AB285_14285 PF02780 Transketolase, C-terminal domain AB285_14290 PF01588 Putative tRNA binding domain AB285_14295 PF00356 Bacterial regulatory proteins, lacI family AB285_14300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AB285_14300 PF16353 Domain of unknown function(DUF4981) AB285_14300 PF00703 Glycosyl hydrolases family 2 AB285_14300 PF02837 Glycosyl hydrolases family 2, sugar binding domain AB285_14300 PF02929 Beta galactosidase small chain AB285_14305 PF04074 YhcH/YjgK/YiaL AB285_14310 PF13520 Amino acid permease AB285_14320 PF01204 Trehalase AB285_14325 PF06674 Protein of unknown function (DUF1176) AB285_14330 PF00293 NUDIX domain AB285_14335 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AB285_14335 PF13247 4Fe-4S dicluster domain AB285_14335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_14345 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AB285_14345 PF07730 Histidine kinase AB285_14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_14345 PF00672 HAMP domain AB285_14350 PF00873 AcrB/AcrD/AcrF family AB285_14355 PF03960 ArsC family AB285_14360 PF07687 Peptidase dimerisation domain AB285_14360 PF01546 Peptidase family M20/M25/M40 AB285_14365 PF13980 Uncharacterised protein family (UPF0370) AB285_14370 PF02230 Phospholipase/Carboxylesterase AB285_14375 PF13718 GNAT acetyltransferase 2 AB285_14375 PF05127 Helicase AB285_14375 PF17176 tRNA-binding domain AB285_14375 PF08351 Domain of unknown function (DUF1726) AB285_14380 PF04228 Putative neutral zinc metallopeptidase AB285_14385 PF01259 SAICAR synthetase AB285_14390 PF06804 NlpB/DapX lipoprotein AB285_14395 PF00701 Dihydrodipicolinate synthetase family AB285_14400 PF01842 ACT domain AB285_14405 PF00578 AhpC/TSA family AB285_14410 PF01594 AI-2E family transporter AB285_14415 PF01435 Peptidase family M48 AB285_14420 PF03960 ArsC family AB285_14430 PF02378 Phosphotransferase system, EIIC AB285_14435 PF01112 Asparaginase AB285_14440 PF00883 Cytosol aminopeptidase family, catalytic domain AB285_14440 PF02789 Cytosol aminopeptidase family, N-terminal domain AB285_14445 PF00308 Bacterial dnaA protein AB285_14450 PF00860 Permease family AB285_14460 PF00232 Glycosyl hydrolase family 1 AB285_14465 PF00586 AIR synthase related protein, N-terminal domain AB285_14465 PF02769 AIR synthase related protein, C-terminal domain AB285_14470 PF00551 Formyl transferase AB285_14475 PF17941 Polyphosphate kinase C-terminal domain 1 AB285_14475 PF13090 Polyphosphate kinase C-terminal domain 2 AB285_14475 PF02503 Polyphosphate kinase middle domain AB285_14475 PF13089 Polyphosphate kinase N-terminal domain AB285_14480 PF02541 Ppx/GppA phosphatase family AB285_14485 PF00563 EAL domain AB285_14485 PF05231 MASE1 AB285_14490 PF11119 Protein of unknown function (DUF2633) AB285_14505 PF06629 MltA-interacting protein MipA AB285_14510 PF00072 Response regulator receiver domain AB285_14510 PF00486 Transcriptional regulatory protein, C terminal AB285_14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_14515 PF00512 His Kinase A (phospho-acceptor) domain AB285_14525 PF00873 AcrB/AcrD/AcrF family AB285_14530 PF00529 HlyD membrane-fusion protein of T1SS AB285_14530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_14535 PF12833 Helix-turn-helix domain AB285_14540 PF00958 GMP synthase C terminal domain AB285_14540 PF00117 Glutamine amidotransferase class-I AB285_14540 PF02540 NAD synthase AB285_14545 PF00478 IMP dehydrogenase / GMP reductase domain AB285_14545 PF00571 CBS domain AB285_14550 PF02601 Exonuclease VII, large subunit AB285_14550 PF13742 OB-fold nucleic acid binding domain AB285_14555 PF02868 Thermolysin metallopeptidase, alpha-helical domain AB285_14555 PF16485 Protealysin propeptide AB285_14555 PF01447 Thermolysin metallopeptidase, catalytic domain AB285_14565 PF07191 zinc-ribbons AB285_14575 PF00854 POT family AB285_14580 PF01926 50S ribosome-binding GTPase AB285_14580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AB285_14585 PF13360 PQQ-like domain AB285_14590 PF09976 Tetratricopeptide repeat-like domain AB285_14595 PF13393 Histidyl-tRNA synthetase AB285_14595 PF03129 Anticodon binding domain AB285_14600 PF04551 GcpE protein AB285_14605 PF13464 Domain of unknown function (DUF4115) AB285_14610 PF04055 Radical SAM superfamily AB285_14615 PF00334 Nucleoside diphosphate kinase AB285_14630 PF13247 4Fe-4S dicluster domain AB285_14630 PF12800 4Fe-4S binding domain AB285_14635 PF01568 Molydopterin dinucleotide binding domain AB285_14635 PF00384 Molybdopterin oxidoreductase AB285_14635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_14640 PF06832 Penicillin-Binding Protein C-terminus Family AB285_14640 PF00912 Transglycosylase AB285_14640 PF00905 Penicillin binding protein transpeptidase domain AB285_14645 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AB285_14645 PF00207 Alpha-2-macroglobulin family AB285_14645 PF07703 Alpha-2-macroglobulin bait region domain AB285_14645 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AB285_14645 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AB285_14645 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AB285_14645 PF17962 Bacterial macroglobulin domain 6 AB285_14645 PF01835 MG2 domain AB285_14645 PF07678 A-macroglobulin TED domain AB285_14650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB285_14650 PF00367 phosphotransferase system, EIIB AB285_14650 PF02378 Phosphotransferase system, EIIC AB285_14655 PF02056 Family 4 glycosyl hydrolase AB285_14655 PF11975 Family 4 glycosyl hydrolase C-terminal domain AB285_14660 PF00581 Rhodanese-like domain AB285_14665 PF01380 SIS domain AB285_14665 PF01418 Helix-turn-helix domain, rpiR family AB285_14670 PF07179 SseB protein N-terminal domain AB285_14670 PF14581 SseB protein C-terminal domain AB285_14675 PF12404 Peptidase AB285_14675 PF00883 Cytosol aminopeptidase family, catalytic domain AB285_14680 PF04384 Iron-sulphur cluster assembly AB285_14685 PF00111 2Fe-2S iron-sulfur cluster binding domain AB285_14690 PF00012 Hsp70 protein AB285_14695 PF07743 HSCB C-terminal oligomerisation domain AB285_14700 PF01521 Iron-sulphur cluster biosynthesis AB285_14705 PF01592 NifU-like N terminal domain AB285_14710 PF00266 Aminotransferase class-V AB285_14715 PF02082 Transcriptional regulator AB285_14720 PF00588 SpoU rRNA Methylase family AB285_14725 PF00459 Inositol monophosphatase family AB285_14730 PF03824 High-affinity nickel-transport protein AB285_14740 PF00874 PRD domain AB285_14745 PF12832 MFS_1 like family AB285_14750 PF07681 DoxX AB285_14755 PF00464 Serine hydroxymethyltransferase AB285_14765 PF00175 Oxidoreductase NAD-binding domain AB285_14765 PF00042 Globin AB285_14765 PF00970 Oxidoreductase FAD-binding domain AB285_14770 PF00543 Nitrogen regulatory protein P-II AB285_14775 PF00158 Sigma-54 interaction domain AB285_14775 PF00072 Response regulator receiver domain AB285_14780 PF13942 YfhG lipoprotein AB285_14785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_14785 PF00512 His Kinase A (phospho-acceptor) domain AB285_14790 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AB285_14790 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AB285_14790 PF02769 AIR synthase related protein, C-terminal domain AB285_14795 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_14795 PF01464 Transglycosylase SLT domain AB285_14800 PF14437 MafB19-like deaminase AB285_14810 PF00367 phosphotransferase system, EIIB AB285_14810 PF02378 Phosphotransferase system, EIIC AB285_14815 PF01380 SIS domain AB285_14820 PF01418 Helix-turn-helix domain, rpiR family AB285_14820 PF01380 SIS domain AB285_14825 PF12838 4Fe-4S dicluster domain AB285_14830 PF01648 4'-phosphopantetheinyl transferase superfamily AB285_14835 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AB285_14840 PF02565 Recombination protein O C terminal AB285_14840 PF11967 Recombination protein O N terminal AB285_14845 PF01926 50S ribosome-binding GTPase AB285_14845 PF07650 KH domain AB285_14850 PF00035 Double-stranded RNA binding motif AB285_14850 PF14622 Ribonuclease-III-like AB285_14855 PF10502 Signal peptidase, peptidase S26 AB285_14860 PF00009 Elongation factor Tu GTP binding domain AB285_14860 PF03144 Elongation factor Tu domain 2 AB285_14860 PF06421 GTP-binding protein LepA C-terminus AB285_14860 PF00679 Elongation factor G C-terminus AB285_14865 PF01527 Transposase AB285_14870 PF13276 HTH-like domain AB285_14870 PF00665 Integrase core domain AB285_14870 PF13333 Integrase core domain AB285_14890 PF06183 DinI-like family AB285_14900 PF00145 C-5 cytosine-specific DNA methylase AB285_14955 PF07358 Protein of unknown function (DUF1482) AB285_14970 PF06630 Enterobacterial exodeoxyribonuclease VIII AB285_14970 PF12684 PDDEXK-like domain of unknown function (DUF3799) AB285_15005 PF03888 MucB/RseB N-terminal domain AB285_15005 PF17188 MucB/RseB C-terminal domain AB285_15010 PF03872 Anti sigma-E protein RseA, N-terminal domain AB285_15010 PF03873 Anti sigma-E protein RseA, C-terminal domain AB285_15015 PF08281 Sigma-70, region 4 AB285_15015 PF04542 Sigma-70 region 2 AB285_15020 PF02910 Fumarate reductase flavoprotein C-term AB285_15020 PF00890 FAD binding domain AB285_15025 PF05175 Methyltransferase small domain AB285_15030 PF00270 DEAD/DEAH box helicase AB285_15030 PF00271 Helicase conserved C-terminal domain AB285_15035 PF01228 Glycine radical AB285_15040 PF03167 Uracil DNA glycosylase superfamily AB285_15045 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB285_15045 PF00588 SpoU rRNA Methylase family AB285_15050 PF00085 Thioredoxin AB285_15060 PF13607 Succinyl-CoA ligase like flavodoxin domain AB285_15060 PF13380 CoA binding domain AB285_15060 PF00583 Acetyltransferase (GNAT) family AB285_15065 PF13091 PLD-like domain AB285_15070 PF10043 Predicted periplasmic lipoprotein (DUF2279) AB285_15075 PF00083 Sugar (and other) transporter AB285_15105 PF02861 Clp amino terminal domain, pathogenicity island component AB285_15105 PF07724 AAA domain (Cdc48 subfamily) AB285_15105 PF17871 AAA lid domain AB285_15105 PF00004 ATPase family associated with various cellular activities (AAA) AB285_15105 PF10431 C-terminal, D2-small domain, of ClpB protein AB285_15115 PF01479 S4 domain AB285_15115 PF00849 RNA pseudouridylate synthase AB285_15120 PF13525 Outer membrane lipoprotein AB285_15125 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AB285_15130 PF01817 Chorismate mutase type II AB285_15130 PF00800 Prephenate dehydratase AB285_15135 PF08450 SMP-30/Gluconolactonase/LRE-like region AB285_15140 PF02153 Prephenate dehydrogenase AB285_15140 PF01817 Chorismate mutase type II AB285_15145 PF00793 DAHP synthetase I family AB285_15150 PF10973 Protein of unknown function (DUF2799) AB285_15155 PF13689 YfiR/HmsC-like AB285_15160 PF00990 Diguanylate cyclase, GGDEF domain AB285_15160 PF17152 Periplasmic sensor domain AB285_15165 PF00691 OmpA family AB285_15180 PF01245 Ribosomal protein L19 AB285_15185 PF01746 tRNA (Guanine-1)-methyltransferase AB285_15190 PF01782 RimM N-terminal domain AB285_15190 PF05239 PRC-barrel domain AB285_15195 PF00886 Ribosomal protein S16 AB285_15200 PF02978 Signal peptide binding domain AB285_15200 PF02881 SRP54-type protein, helical bundle domain AB285_15200 PF00448 SRP54-type protein, GTPase domain AB285_15205 PF01578 Cytochrome C assembly protein AB285_15210 PF00571 CBS domain AB285_15210 PF03471 Transporter associated domain AB285_15210 PF01595 Cyclin M transmembrane N-terminal domain AB285_15215 PF01025 GrpE AB285_15225 PF01513 ATP-NAD kinase AB285_15230 PF02463 RecF/RecN/SMC N terminal domain AB285_15235 PF04355 SmpA / OmlA family AB285_15240 PF03658 RnfH family Ubiquitin AB285_15245 PF03364 Polyketide cyclase / dehydrase and lipid transport AB285_15250 PF01668 SmpB protein AB285_15255 PF13356 Arm DNA-binding domain AB285_15255 PF00589 Phage integrase family AB285_15260 PF00580 UvrD/REP helicase N-terminal domain AB285_15260 PF13361 UvrD-like helicase C-terminal domain AB285_15325 PF00589 Phage integrase family AB285_15345 PF01527 Transposase AB285_15350 PF13276 HTH-like domain AB285_15350 PF00665 Integrase core domain AB285_15350 PF13333 Integrase core domain AB285_15355 PF13356 Arm DNA-binding domain AB285_15355 PF00589 Phage integrase family AB285_15365 PF13148 Protein of unknown function (DUF3987) AB285_15380 PF13737 Transposase DDE domain AB285_15390 PF00529 HlyD membrane-fusion protein of T1SS AB285_15390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_15395 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AB285_15400 PF01381 Helix-turn-helix AB285_15405 PF00155 Aminotransferase class I and II AB285_15410 PF03466 LysR substrate binding domain AB285_15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_15420 PF08241 Methyltransferase domain AB285_15425 PF07969 Amidohydrolase family AB285_15430 PF00696 Amino acid kinase family AB285_15440 PF06545 Protein of unknown function (DUF1116) AB285_15445 PF02629 CoA binding domain AB285_15445 PF00549 CoA-ligase AB285_15450 PF12796 Ankyrin repeats (3 copies) AB285_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_15455 PF03466 LysR substrate binding domain AB285_15460 PF01679 Proteolipid membrane potential modulator AB285_15470 PF00816 H-NS histone family AB285_15475 PF06610 L-alanine exporter AB285_15480 PF09400 Protein of unknown function (DUF2002) AB285_15485 PF05957 Bacterial protein of unknown function (DUF883) AB285_15490 PF00462 Glutaredoxin AB285_15495 PF07972 NrdI Flavodoxin like AB285_15500 PF02867 Ribonucleotide reductase, barrel domain AB285_15500 PF00317 Ribonucleotide reductase, all-alpha domain AB285_15500 PF08343 Ribonucleotide reductase N-terminal AB285_15505 PF00268 Ribonucleotide reductase, small chain AB285_15510 PF00005 ABC transporter AB285_15510 PF00571 CBS domain AB285_15515 PF00528 Binding-protein-dependent transport system inner membrane component AB285_15520 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB285_15525 PF07690 Major Facilitator Superfamily AB285_15530 PF01047 MarR family AB285_15535 PF00529 HlyD membrane-fusion protein of T1SS AB285_15535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_15540 PF07690 Major Facilitator Superfamily AB285_15545 PF08502 LeuA allosteric (dimerisation) domain AB285_15545 PF00682 HMGL-like AB285_15550 PF12852 Cupin AB285_15550 PF12833 Helix-turn-helix domain AB285_15555 PF02664 S-Ribosylhomocysteinase (LuxS) AB285_15560 PF04262 Glutamate-cysteine ligase AB285_15565 PF09335 SNARE associated Golgi protein AB285_15570 PF13419 Haloacid dehalogenase-like hydrolase AB285_15600 PF02599 Global regulator protein family AB285_15605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB285_15605 PF01411 tRNA synthetases class II (A) AB285_15605 PF02272 DHHA1 domain AB285_15610 PF02631 RecX family AB285_15615 PF00154 recA bacterial DNA recombination protein AB285_15620 PF02464 Competence-damaged protein AB285_15625 PF01297 Zinc-uptake complex component A periplasmic AB285_15630 PF00950 ABC 3 transport family AB285_15635 PF00005 ABC transporter AB285_15640 PF13406 Transglycosylase SLT domain AB285_15645 PF03608 PTS system enzyme II sorbitol-specific factor AB285_15650 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AB285_15650 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AB285_15655 PF03829 PTS system glucitol/sorbitol-specific IIA component AB285_15660 PF00106 short chain dehydrogenase AB285_15665 PF06923 Glucitol operon activator protein (GutM) AB285_15670 PF08220 DeoR-like helix-turn-helix domain AB285_15670 PF00455 DeoR C terminal sensor domain AB285_15675 PF00571 CBS domain AB285_15675 PF01380 SIS domain AB285_15680 PF00158 Sigma-54 interaction domain AB285_15680 PF01590 GAF domain AB285_15685 PF00753 Metallo-beta-lactamase superfamily AB285_15685 PF00301 Rubredoxin AB285_15685 PF00258 Flavodoxin AB285_15690 PF18113 Rubredoxin binding C-terminal domain AB285_15690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_15695 PF03824 High-affinity nickel-transport protein AB285_15700 PF07503 HypF finger AB285_15700 PF01300 Telomere recombination AB285_15700 PF17788 HypF Kae1-like domain AB285_15700 PF00708 Acylphosphatase AB285_15705 PF13247 4Fe-4S dicluster domain AB285_15705 PF12800 4Fe-4S binding domain AB285_15710 PF00356 Bacterial regulatory proteins, lacI family AB285_15715 PF02378 Phosphotransferase system, EIIC AB285_15715 PF00367 phosphotransferase system, EIIB AB285_15720 PF00232 Glycosyl hydrolase family 1 AB285_15725 PF01750 Hydrogenase maturation protease AB285_15730 PF07450 Formate hydrogenlyase maturation protein HycH AB285_15735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AB285_15740 PF12838 4Fe-4S dicluster domain AB285_15745 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AB285_15745 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AB285_15745 PF00374 Nickel-dependent hydrogenase AB285_15750 PF00146 NADH dehydrogenase AB285_15755 PF00361 Proton-conducting membrane transporter AB285_15760 PF13247 4Fe-4S dicluster domain AB285_15765 PF11046 Transcriptional repressor of hyc and hyp operons AB285_15770 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AB285_15775 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB285_15780 PF01455 HupF/HypC family AB285_15785 PF01924 Hydrogenase formation hypA family AB285_15790 PF02769 AIR synthase related protein, C-terminal domain AB285_15790 PF00586 AIR synthase related protein, N-terminal domain AB285_15795 PF02954 Bacterial regulatory protein, Fis family AB285_15795 PF01590 GAF domain AB285_15795 PF00158 Sigma-54 interaction domain AB285_15800 PF11756 Nitrous oxide-stimulated promoter AB285_15805 PF08845 Toxin SymE, type I toxin-antitoxin system AB285_15810 PF05188 MutS domain II AB285_15810 PF05190 MutS family domain IV AB285_15810 PF01624 MutS domain I AB285_15810 PF05192 MutS domain III AB285_15810 PF00488 MutS domain V AB285_15820 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AB285_15825 PF02441 Flavoprotein AB285_15830 PF01047 MarR family AB285_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_15835 PF03466 LysR substrate binding domain AB285_15840 PF07690 Major Facilitator Superfamily AB285_15850 PF04545 Sigma-70, region 4 AB285_15850 PF04542 Sigma-70 region 2 AB285_15850 PF04539 Sigma-70 region 3 AB285_15850 PF00140 Sigma-70 factor, region 1.2 AB285_15855 PF01476 LysM domain AB285_15855 PF01551 Peptidase family M23 AB285_15865 PF01975 Survival protein SurE AB285_15870 PF01142 tRNA pseudouridine synthase D (TruD) AB285_15875 PF02542 YgbB family AB285_15880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AB285_15885 PF04977 Septum formation initiator AB285_15890 PF12084 Protein of unknown function (DUF3561) AB285_15900 PF00009 Elongation factor Tu GTP binding domain AB285_15905 PF01507 Phosphoadenosine phosphosulfate reductase family AB285_15910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB285_15910 PF10414 Sirohaem synthase dimerisation region AB285_15910 PF14824 Sirohaem biosynthesis protein central AB285_15915 PF04389 Peptidase family M28 AB285_15920 PF01507 Phosphoadenosine phosphosulfate reductase family AB285_15925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB285_15925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB285_15930 PF00667 FAD binding domain AB285_15930 PF00175 Oxidoreductase NAD-binding domain AB285_15930 PF00258 Flavodoxin AB285_15935 PF01242 6-pyruvoyl tetrahydropterin synthase AB285_15940 PF12833 Helix-turn-helix domain AB285_15945 PF01546 Peptidase family M20/M25/M40 AB285_15945 PF07687 Peptidase dimerisation domain AB285_15950 PF07690 Major Facilitator Superfamily AB285_15955 PF04055 Radical SAM superfamily AB285_15960 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AB285_15965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB285_15965 PF02378 Phosphotransferase system, EIIC AB285_15965 PF00367 phosphotransferase system, EIIB AB285_15970 PF01380 SIS domain AB285_15970 PF01418 Helix-turn-helix domain, rpiR family AB285_15975 PF03952 Enolase, N-terminal domain AB285_15975 PF00113 Enolase, C-terminal TIM barrel domain AB285_15980 PF06418 CTP synthase N-terminus AB285_15980 PF00117 Glutamine amidotransferase class-I AB285_15985 PF03819 MazG nucleotide pyrophosphohydrolase domain AB285_15990 PF13291 ACT domain AB285_15990 PF04607 Region found in RelA / SpoT proteins AB285_15990 PF02824 TGS domain AB285_15995 PF01938 TRAM domain AB285_15995 PF05958 tRNA (Uracil-5-)-methyltransferase AB285_16000 PF01627 Hpt domain AB285_16000 PF00672 HAMP domain AB285_16000 PF00512 His Kinase A (phospho-acceptor) domain AB285_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_16000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AB285_16000 PF00072 Response regulator receiver domain AB285_16005 PF02595 Glycerate kinase family AB285_16010 PF13378 Enolase C-terminal domain-like AB285_16015 PF13378 Enolase C-terminal domain-like AB285_16015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB285_16020 PF07690 Major Facilitator Superfamily AB285_16025 PF00258 Flavodoxin AB285_16030 PF00849 RNA pseudouridylate synthase AB285_16035 PF04287 tRNA pseudouridine synthase C AB285_16045 PF07348 Syd protein (SUKH-2) AB285_16050 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AB285_16050 PF14489 QueF-like protein AB285_16055 PF03641 Possible lysine decarboxylase AB285_16055 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AB285_16055 PF11892 Domain of unknown function (DUF3412) AB285_16065 PF03315 Serine dehydratase beta chain AB285_16065 PF03313 Serine dehydratase alpha chain AB285_16070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AB285_16070 PF01367 5'-3' exonuclease, C-terminal SAM fold AB285_16075 PF01728 FtsJ-like methyltransferase AB285_16075 PF18125 RlmM ferredoxin-like domain AB285_16080 PF04241 Protein of unknown function (DUF423) AB285_16085 PF03466 LysR substrate binding domain AB285_16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_16090 PF06004 Bacterial protein of unknown function (DUF903) AB285_16095 PF00266 Aminotransferase class-V AB285_16100 PF02657 Fe-S metabolism associated domain AB285_16105 PF00899 ThiF family AB285_16110 PF06725 3D domain AB285_16110 PF03562 MltA specific insert domain AB285_16130 PF01520 N-acetylmuramoyl-L-alanine amidase AB285_16130 PF11741 AMIN domain AB285_16135 PF00583 Acetyltransferase (GNAT) family AB285_16135 PF00696 Amino acid kinase family AB285_16140 PF13538 UvrD-like helicase C-terminal domain AB285_16145 PF13361 UvrD-like helicase C-terminal domain AB285_16145 PF00580 UvrD/REP helicase N-terminal domain AB285_16145 PF12705 PD-(D/E)XK nuclease superfamily AB285_16150 PF16187 Middle or third domain of peptidase_M16 AB285_16150 PF05193 Peptidase M16 inactive domain AB285_16150 PF00675 Insulinase (Peptidase family M16) AB285_16155 PF17946 RecC C-terminal domain AB285_16160 PF07963 Prokaryotic N-terminal methylation motif AB285_16160 PF12528 Type II secretion prepilin peptidase dependent protein C AB285_16165 PF10713 Protein of unknown function (DUF2509) AB285_16170 PF07963 Prokaryotic N-terminal methylation motif AB285_16175 PF07963 Prokaryotic N-terminal methylation motif AB285_16180 PF00303 Thymidylate synthase AB285_16185 PF01790 Prolipoprotein diacylglyceryl transferase AB285_16190 PF02896 PEP-utilising enzyme, TIM barrel domain AB285_16190 PF00391 PEP-utilising enzyme, mobile domain AB285_16190 PF05524 PEP-utilising enzyme, N-terminal AB285_16190 PF01590 GAF domain AB285_16195 PF00293 NUDIX domain AB285_16200 PF02976 DNA mismatch repair enzyme MutH AB285_16205 PF06004 Bacterial protein of unknown function (DUF903) AB285_16210 PF00248 Aldo/keto reductase family AB285_16215 PF07690 Major Facilitator Superfamily AB285_16220 PF01553 Acyltransferase AB285_16220 PF00501 AMP-binding enzyme AB285_16225 PF00356 Bacterial regulatory proteins, lacI family AB285_16235 PF00392 Bacterial regulatory proteins, gntR family AB285_16235 PF07729 FCD domain AB285_16240 PF00232 Glycosyl hydrolase family 1 AB285_16245 PF02378 Phosphotransferase system, EIIC AB285_16250 PF00356 Bacterial regulatory proteins, lacI family AB285_16255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AB285_16255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AB285_16260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_16260 PF03466 LysR substrate binding domain AB285_16265 PF01177 Asp/Glu/Hydantoin racemase AB285_16275 PF02706 Chain length determinant protein AB285_16280 PF00528 Binding-protein-dependent transport system inner membrane component AB285_16285 PF00528 Binding-protein-dependent transport system inner membrane component AB285_16290 PF03459 TOBE domain AB285_16290 PF17912 MalK OB fold domain AB285_16290 PF00005 ABC transporter AB285_16300 PF00083 Sugar (and other) transporter AB285_16310 PF04962 KduI/IolB family AB285_16315 PF14583 Oligogalacturonate lyase AB285_16320 PF06178 Oligogalacturonate-specific porin protein (KdgM) AB285_16325 PF02803 Thiolase, C-terminal domain AB285_16325 PF00108 Thiolase, N-terminal domain AB285_16330 PF03466 LysR substrate binding domain AB285_16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_16340 PF03222 Tryptophan/tyrosine permease family AB285_16345 PF14542 GCN5-related N-acetyl-transferase AB285_16350 PF06902 Divergent 4Fe-4S mono-cluster AB285_16355 PF10685 Stress-induced bacterial acidophilic repeat motif AB285_16360 PF05974 Domain of unknown function (DUF892) AB285_16365 PF05974 Domain of unknown function (DUF892) AB285_16370 PF05067 Manganese containing catalase AB285_16375 PF01654 Cytochrome bd terminal oxidase subunit I AB285_16380 PF02322 Cytochrome bd terminal oxidase subunit II AB285_16385 PF16657 Maltogenic Amylase, C-terminal domain AB285_16385 PF00128 Alpha amylase, catalytic domain AB285_16390 PF00561 alpha/beta hydrolase fold AB285_16390 PF00106 short chain dehydrogenase AB285_16395 PF02464 Competence-damaged protein AB285_16410 PF04076 Bacterial OB fold (BOF) protein AB285_16420 PF00753 Metallo-beta-lactamase superfamily AB285_16420 PF14863 Alkyl sulfatase dimerisation AB285_16420 PF14864 Alkyl sulfatase C-terminal AB285_16430 PF00691 OmpA family AB285_16430 PF01389 OmpA-like transmembrane domain AB285_16435 PF15977 Winged helix-turn-helix DNA binding AB285_16440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AB285_16445 PF00857 Isochorismatase family AB285_16465 PF01551 Peptidase family M23 AB285_16465 PF01476 LysM domain AB285_16470 PF00293 NUDIX domain AB285_16475 PF00152 tRNA synthetases class II (D, K and N) AB285_16475 PF01336 OB-fold nucleic acid binding domain AB285_16480 PF00472 RF-1 domain AB285_16480 PF03462 PCRF domain AB285_16490 PF17768 RecJ OB domain AB285_16490 PF02272 DHHA1 domain AB285_16490 PF01368 DHH family AB285_16495 PF13098 Thioredoxin-like domain AB285_16495 PF10411 Disulfide bond isomerase protein N-terminus AB285_16500 PF00589 Phage integrase family AB285_16500 PF02899 Phage integrase, N-terminal SAM-like domain AB285_16505 PF00258 Flavodoxin AB285_16510 PF07254 Membrane-bound toxin component of toxin-antitoxin system AB285_16515 PF03937 Flavinator of succinate dehydrogenase AB285_16520 PF01571 Aminomethyltransferase folate-binding domain AB285_16525 PF03006 Haemolysin-III related AB285_16530 PF01418 Helix-turn-helix domain, rpiR family AB285_16530 PF01380 SIS domain AB285_16535 PF00232 Glycosyl hydrolase family 1 AB285_16545 PF11412 Disulphide bond corrector protein DsbC AB285_16545 PF02683 Cytochrome C biogenesis protein transmembrane region AB285_16555 PF00578 AhpC/TSA family AB285_16565 PF02347 Glycine cleavage system P-protein AB285_16570 PF01597 Glycine cleavage H-protein AB285_16575 PF01571 Aminomethyltransferase folate-binding domain AB285_16575 PF08669 Glycine cleavage T-protein C-terminal barrel domain AB285_16580 PF01494 FAD binding domain AB285_16585 PF01494 FAD binding domain AB285_16590 PF00557 Metallopeptidase family M24 AB285_16590 PF05195 Aminopeptidase P, N-terminal domain AB285_16595 PF03695 Uncharacterised protein family (UPF0149) AB285_16600 PF05164 Cell division protein ZapA AB285_16605 PF01812 5-formyltetrahydrofolate cyclo-ligase family AB285_16610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB285_16610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB285_16610 PF01842 ACT domain AB285_16615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AB285_16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_16620 PF03466 LysR substrate binding domain AB285_16625 PF04402 Protein of unknown function (DUF541) AB285_16630 PF01810 LysE type translocator AB285_16635 PF03480 Bacterial extracellular solute-binding protein, family 7 AB285_16640 PF05552 Conserved TM helix AB285_16640 PF00924 Mechanosensitive ion channel AB285_16645 PF01116 Fructose-bisphosphate aldolase class-II AB285_16650 PF00162 Phosphoglycerate kinase AB285_16655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB285_16655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB285_16660 PF00456 Transketolase, thiamine diphosphate binding domain AB285_16660 PF02779 Transketolase, pyrimidine binding domain AB285_16660 PF02780 Transketolase, C-terminal domain AB285_16665 PF01435 Peptidase family M48 AB285_16670 PF03573 outer membrane porin, OprD family AB285_16675 PF00205 Thiamine pyrophosphate enzyme, central domain AB285_16675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_16675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_16680 PF00171 Aldehyde dehydrogenase family AB285_16685 PF01958 Domain of unknown function DUF108 AB285_16685 PF03447 Homoserine dehydrogenase, NAD binding domain AB285_16695 PF12697 Alpha/beta hydrolase family AB285_16710 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_16710 PF14759 Reductase C-terminal AB285_16720 PF01614 Bacterial transcriptional regulator AB285_16720 PF09339 IclR helix-turn-helix domain AB285_16730 PF00355 Rieske [2Fe-2S] domain AB285_16740 PF00355 Rieske [2Fe-2S] domain AB285_16750 PF00491 Arginase family AB285_16755 PF17810 Arginine decarboxylase helical bundle domain AB285_16755 PF17944 Arginine decarboxylase C-terminal helical extension AB285_16755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AB285_16765 PF00438 S-adenosylmethionine synthetase, N-terminal domain AB285_16765 PF02773 S-adenosylmethionine synthetase, C-terminal domain AB285_16765 PF02772 S-adenosylmethionine synthetase, central domain AB285_16770 PF00083 Sugar (and other) transporter AB285_16775 PF10263 SprT-like family AB285_16775 PF17283 SprT-like zinc ribbon domain AB285_16780 PF04231 Endonuclease I AB285_16785 PF04452 RNA methyltransferase AB285_16790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AB285_16790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AB285_16795 PF02622 Uncharacterized ACR, COG1678 AB285_16800 PF03652 Holliday junction resolvase AB285_16805 PF00437 Type II/IV secretion system protein AB285_16810 PF01168 Alanine racemase, N-terminal domain AB285_16815 PF02325 YGGT family AB285_16820 PF02594 Uncharacterised ACR, YggU family COG1872 AB285_16825 PF01725 Ham1 family AB285_16830 PF04055 Radical SAM superfamily AB285_16830 PF06969 HemN C-terminal domain AB285_16835 PF04480 Protein of unknown function (DUF559) AB285_16840 PF11101 Protein of unknown function (DUF2884) AB285_16845 PF04320 Protein with unknown function (DUF469) AB285_16850 PF02390 Putative methyltransferase AB285_16855 PF14815 NUDIX domain AB285_16855 PF00730 HhH-GPD superfamily base excision DNA repair protein AB285_16855 PF00633 Helix-hairpin-helix motif AB285_16855 PF10576 Iron-sulfur binding domain of endonuclease III AB285_16860 PF04362 Bacterial Fe(2+) trafficking AB285_16865 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AB285_16865 PF01464 Transglycosylase SLT domain AB285_16870 PF03825 Nucleoside H+ symporter AB285_16875 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AB285_16880 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AB285_16885 PF04223 Citrate lyase, alpha subunit (CitF) AB285_16890 PF03328 HpcH/HpaI aldolase/citrate lyase family AB285_16895 PF06857 Malonate decarboxylase delta subunit (MdcD) AB285_16900 PF08218 Citrate lyase ligase C-terminal domain AB285_16900 PF00583 Acetyltransferase (GNAT) family AB285_16905 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB285_16910 PF03390 2-hydroxycarboxylate transporter family AB285_16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_16915 PF17203 Single cache domain 3 AB285_16920 PF12431 Transcriptional regulator AB285_16920 PF00072 Response regulator receiver domain AB285_16925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AB285_16925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AB285_16925 PF01276 Orn/Lys/Arg decarboxylase, major domain AB285_16930 PF04474 Protein of unknown function (DUF554) AB285_17040 PF14461 Prokaryotic E2 family B AB285_17040 PF00899 ThiF family AB285_17045 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB285_17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_17045 PF00072 Response regulator receiver domain AB285_17045 PF00512 His Kinase A (phospho-acceptor) domain AB285_17045 PF00989 PAS fold AB285_17045 PF01627 Hpt domain AB285_17050 PF00196 Bacterial regulatory proteins, luxR family AB285_17050 PF00072 Response regulator receiver domain AB285_17075 PF01522 Polysaccharide deacetylase AB285_17075 PF14883 Hypothetical glycosyl hydrolase family 13 AB285_17080 PF00535 Glycosyl transferase family 2 AB285_17090 PF05257 CHAP domain AB285_17090 PF03738 Glutathionylspermidine synthase preATP-grasp AB285_17095 PF02798 Glutathione S-transferase, N-terminal domain AB285_17100 PF00455 DeoR C terminal sensor domain AB285_17100 PF08220 DeoR-like helix-turn-helix domain AB285_17105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_17105 PF02203 Tar ligand binding domain homologue AB285_17105 PF00672 HAMP domain AB285_17110 PF00248 Aldo/keto reductase family AB285_17115 PF03350 Uncharacterized protein family, UPF0114 AB285_17135 PF02472 Biopolymer transport protein ExbD/TolR AB285_17140 PF01618 MotA/TolQ/ExbB proton channel family AB285_17145 PF01053 Cys/Met metabolism PLP-dependent enzyme AB285_17150 PF09335 SNARE associated Golgi protein AB285_17155 PF12833 Helix-turn-helix domain AB285_17155 PF06719 AraC-type transcriptional regulator N-terminus AB285_17160 PF00465 Iron-containing alcohol dehydrogenase AB285_17165 PF00248 Aldo/keto reductase family AB285_17190 PF03400 IS1 transposase AB285_17195 PF02583 Metal-sensitive transcriptional repressor AB285_17200 PF00107 Zinc-binding dehydrogenase AB285_17200 PF08240 Alcohol dehydrogenase GroES-like domain AB285_17210 PF00756 Putative esterase AB285_17230 PF01527 Transposase AB285_17240 PF05717 IS66 Orf2 like protein AB285_17260 PF13737 Transposase DDE domain AB285_17265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_17265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB285_17270 PF12759 InsA C-terminal domain AB285_17270 PF03811 InsA N-terminal domain AB285_17275 PF03400 IS1 transposase AB285_17280 PF08281 Sigma-70, region 4 AB285_17280 PF04542 Sigma-70 region 2 AB285_17285 PF04773 FecR protein AB285_17285 PF16220 Domain of unknown function (DUF4880) AB285_17290 PF00593 TonB dependent receptor AB285_17290 PF07660 Secretin and TonB N terminus short domain AB285_17290 PF07715 TonB-dependent Receptor Plug Domain AB285_17295 PF01497 Periplasmic binding protein AB285_17300 PF01032 FecCD transport family AB285_17305 PF01032 FecCD transport family AB285_17310 PF00005 ABC transporter AB285_17315 PF05717 IS66 Orf2 like protein AB285_17330 PF02371 Transposase IS116/IS110/IS902 family AB285_17330 PF01548 Transposase AB285_17335 PF00107 Zinc-binding dehydrogenase AB285_17335 PF08240 Alcohol dehydrogenase GroES-like domain AB285_17340 PF00356 Bacterial regulatory proteins, lacI family AB285_17345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AB285_17345 PF02837 Glycosyl hydrolases family 2, sugar binding domain AB285_17345 PF16353 Domain of unknown function(DUF4981) AB285_17345 PF00703 Glycosyl hydrolases family 2 AB285_17345 PF02929 Beta galactosidase small chain AB285_17350 PF01306 LacY proton/sugar symporter AB285_17355 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_17355 PF12464 Maltose acetyltransferase AB285_17360 PF03400 IS1 transposase AB285_17365 PF08240 Alcohol dehydrogenase GroES-like domain AB285_17365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AB285_17370 PF01609 Transposase DDE domain AB285_17370 PF05598 Transposase domain (DUF772) AB285_17375 PF13333 Integrase core domain AB285_17375 PF00665 Integrase core domain AB285_17375 PF13276 HTH-like domain AB285_17380 PF01527 Transposase AB285_17415 PF00394 Multicopper oxidase AB285_17415 PF07732 Multicopper oxidase AB285_17415 PF07731 Multicopper oxidase AB285_17420 PF01553 Acyltransferase AB285_17425 PF00521 DNA gyrase/topoisomerase IV, subunit A AB285_17425 PF03989 DNA gyrase C-terminal domain, beta-propeller AB285_17430 PF04076 Bacterial OB fold (BOF) protein AB285_17435 PF00072 Response regulator receiver domain AB285_17435 PF00486 Transcriptional regulatory protein, C terminal AB285_17440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_17440 PF00512 His Kinase A (phospho-acceptor) domain AB285_17440 PF08521 Two-component sensor kinase N-terminal AB285_17445 PF02525 Flavodoxin-like fold AB285_17450 PF03992 Antibiotic biosynthesis monooxygenase AB285_17455 PF01476 LysM domain AB285_17455 PF04972 BON domain AB285_17460 PF07470 Glycosyl Hydrolase Family 88 AB285_17465 PF01306 LacY proton/sugar symporter AB285_17490 PF01032 FecCD transport family AB285_17495 PF01032 FecCD transport family AB285_17500 PF00005 ABC transporter AB285_17505 PF07715 TonB-dependent Receptor Plug Domain AB285_17510 PF00204 DNA gyrase B AB285_17510 PF00986 DNA gyrase B subunit, carboxyl terminus AB285_17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_17510 PF01751 Toprim domain AB285_17515 PF05728 Uncharacterised protein family (UPF0227) AB285_17520 PF00149 Calcineurin-like phosphoesterase AB285_17525 PF06853 Protein of unknown function (DUF1249) AB285_17530 PF00293 NUDIX domain AB285_17535 PF02321 Outer membrane efflux protein AB285_17540 PF06693 Protein of unknown function (DUF1190) AB285_17545 PF03738 Glutathionylspermidine synthase preATP-grasp AB285_17550 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AB285_17555 PF02535 ZIP Zinc transporter AB285_17560 PF00419 Fimbrial protein AB285_17565 PF13954 PapC N-terminal domain AB285_17565 PF00577 Outer membrane usher protein AB285_17565 PF13953 PapC C-terminal domain AB285_17570 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_17570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_17575 PF00419 Fimbrial protein AB285_17580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AB285_17585 PF04380 Membrane fusogenic activity AB285_17590 PF00294 pfkB family carbohydrate kinase AB285_17590 PF01467 Cytidylyltransferase-like AB285_17595 PF08335 GlnD PII-uridylyltransferase AB285_17595 PF03710 Glutamate-ammonia ligase adenylyltransferase AB285_17600 PF01928 CYTH domain AB285_17605 PF08239 Bacterial SH3 domain AB285_17610 PF01743 Poly A polymerase head domain AB285_17610 PF01966 HD domain AB285_17610 PF12627 Probable RNA and SrmB- binding site of polymerase A AB285_17615 PF02673 Bacitracin resistance protein BacA AB285_17620 PF02152 Dihydroneopterin aldolase AB285_17625 PF02660 Glycerol-3-phosphate acyltransferase AB285_17630 PF00083 Sugar (and other) transporter AB285_17635 PF01774 UreD urease accessory protein AB285_17640 PF00547 Urease, gamma subunit AB285_17645 PF00699 Urease beta subunit AB285_17650 PF01979 Amidohydrolase family AB285_17650 PF00449 Urease alpha-subunit, N-terminal domain AB285_17655 PF05194 UreE urease accessory protein, C-terminal domain AB285_17655 PF02814 UreE urease accessory protein, N-terminal domain AB285_17665 PF01730 UreF AB285_17670 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB285_17675 PF00814 Glycoprotease family AB285_17680 PF01165 Ribosomal protein S21 AB285_17685 PF10410 DnaB-helicase binding domain of primase AB285_17685 PF08275 DNA primase catalytic core, N-terminal domain AB285_17685 PF08278 DNA primase DnaG DnaB-binding AB285_17685 PF01807 CHC2 zinc finger AB285_17690 PF04542 Sigma-70 region 2 AB285_17690 PF00140 Sigma-70 factor, region 1.2 AB285_17690 PF03979 Sigma-70 factor, region 1.1 AB285_17690 PF04545 Sigma-70, region 4 AB285_17690 PF04546 Sigma-70, non-essential region AB285_17690 PF04539 Sigma-70 region 3 AB285_17695 PF03167 Uracil DNA glycosylase superfamily AB285_17740 PF17482 Phage tail sheath C-terminal domain AB285_17740 PF04984 Phage tail sheath protein subtilisin-like domain AB285_17745 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AB285_17750 PF08400 Prophage tail fibre N-terminal AB285_17750 PF03335 Phage tail fibre repeat AB285_17750 PF07484 Phage Tail Collar Domain AB285_17845 PF00145 C-5 cytosine-specific DNA methylase AB285_17855 PF05840 Bacteriophage replication gene A protein (GPA) AB285_17860 PF01258 Prokaryotic dksA/traR C4-type zinc finger AB285_17870 PF17282 Family of unknown function (DUF5347) AB285_17875 PF06892 Phage regulatory protein CII (CP76) AB285_17890 PF02899 Phage integrase, N-terminal SAM-like domain AB285_17890 PF00589 Phage integrase family AB285_17900 PF08021 Siderophore-interacting FAD-binding domain AB285_17900 PF04954 Siderophore-interacting protein AB285_17905 PF03551 Transcriptional regulator PadR-like family AB285_17910 PF00672 HAMP domain AB285_17910 PF02203 Tar ligand binding domain homologue AB285_17910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_17915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB285_17915 PF08447 PAS fold AB285_17920 PF00202 Aminotransferase class-III AB285_17925 PF00419 Fimbrial protein AB285_17930 PF00419 Fimbrial protein AB285_17940 PF00577 Outer membrane usher protein AB285_17940 PF13954 PapC N-terminal domain AB285_17940 PF13953 PapC C-terminal domain AB285_17950 PF00419 Fimbrial protein AB285_17960 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_17960 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_17975 PF03992 Antibiotic biosynthesis monooxygenase AB285_17980 PF01791 DeoC/LacD family aldolase AB285_17985 PF13407 Periplasmic binding protein domain AB285_17990 PF02653 Branched-chain amino acid transport system / permease component AB285_17995 PF02653 Branched-chain amino acid transport system / permease component AB285_18000 PF00005 ABC transporter AB285_18005 PF04198 Putative sugar-binding domain AB285_18010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_18010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_18015 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_18015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB285_18020 PF05175 Methyltransferase small domain AB285_18025 PF01863 Protein of unknown function DUF45 AB285_18030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_18035 PF03741 Integral membrane protein TerC family AB285_18040 PF00375 Sodium:dicarboxylate symporter family AB285_18045 PF08666 SAF domain AB285_18045 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AB285_18050 PF02614 Glucuronate isomerase AB285_18055 PF07690 Major Facilitator Superfamily AB285_18060 PF00392 Bacterial regulatory proteins, gntR family AB285_18060 PF07729 FCD domain AB285_18065 PF09335 SNARE associated Golgi protein AB285_18070 PF13721 SecD export protein N-terminal TM region AB285_18075 PF06476 Protein of unknown function (DUF1090) AB285_18080 PF05957 Bacterial protein of unknown function (DUF883) AB285_18085 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AB285_18090 PF13997 YqjK-like protein AB285_18095 PF07681 DoxX AB285_18100 PF13409 Glutathione S-transferase, N-terminal domain AB285_18105 PF05656 Protein of unknown function (DUF805) AB285_18110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_18110 PF03466 LysR substrate binding domain AB285_18115 PF17954 Quercetinase C-terminal cupin domain AB285_18115 PF02678 Pirin AB285_18120 PF03313 Serine dehydratase alpha chain AB285_18130 PF02901 Pyruvate formate lyase-like AB285_18130 PF01228 Glycine radical AB285_18135 PF00871 Acetokinase family AB285_18140 PF03222 Tryptophan/tyrosine permease family AB285_18145 PF00291 Pyridoxal-phosphate dependent enzyme AB285_18150 PF03466 LysR substrate binding domain AB285_18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_18155 PF02595 Glycerate kinase family AB285_18160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB285_18160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB285_18165 PF03328 HpcH/HpaI aldolase/citrate lyase family AB285_18170 PF08666 SAF domain AB285_18170 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AB285_18175 PF08220 DeoR-like helix-turn-helix domain AB285_18175 PF00455 DeoR C terminal sensor domain AB285_18180 PF08013 Tagatose 6 phosphate kinase AB285_18185 PF03830 PTS system sorbose subfamily IIB component AB285_18190 PF03609 PTS system sorbose-specific iic component AB285_18195 PF03613 PTS system mannose/fructose/sorbose family IID component AB285_18200 PF03610 PTS system fructose IIA component AB285_18205 PF01979 Amidohydrolase family AB285_18210 PF01380 SIS domain AB285_18215 PF01116 Fructose-bisphosphate aldolase class-II AB285_18220 PF00367 phosphotransferase system, EIIB AB285_18220 PF02378 Phosphotransferase system, EIIC AB285_18225 PF00155 Aminotransferase class I and II AB285_18235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB285_18240 PF04348 LppC putative lipoprotein AB285_18245 PF02021 Uncharacterised protein family UPF0102 AB285_18250 PF13580 SIS domain AB285_18255 PF04972 BON domain AB285_18260 PF03773 Predicted permease AB285_18265 PF13460 NAD(P)H-binding AB285_18270 PF01965 DJ-1/PfpI family AB285_18280 PF01541 GIY-YIG catalytic domain AB285_18285 PF13508 Acetyltransferase (GNAT) domain AB285_18305 PF00296 Luciferase-like monooxygenase AB285_18310 PF03222 Tryptophan/tyrosine permease family AB285_18315 PF12343 Cold shock protein DEAD box A AB285_18315 PF00271 Helicase conserved C-terminal domain AB285_18315 PF03880 DbpA RNA binding domain AB285_18315 PF00270 DEAD/DEAH box helicase AB285_18320 PF07719 Tetratricopeptide repeat AB285_18320 PF13181 Tetratricopeptide repeat AB285_18325 PF00575 S1 RNA binding domain AB285_18325 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AB285_18325 PF00013 KH domain AB285_18325 PF01138 3' exoribonuclease family, domain 1 AB285_18325 PF03725 3' exoribonuclease family, domain 2 AB285_18330 PF00312 Ribosomal protein S15 AB285_18335 PF09157 Pseudouridine synthase II TruB, C-terminal AB285_18335 PF16198 tRNA pseudouridylate synthase B C-terminal domain AB285_18335 PF01509 TruB family pseudouridylate synthase (N terminal domain) AB285_18340 PF02033 Ribosome-binding factor A AB285_18345 PF04760 Translation initiation factor IF-2, N-terminal region AB285_18345 PF08364 Bacterial translation initiation factor IF-2 associated region AB285_18345 PF11987 Translation-initiation factor 2 AB285_18345 PF00009 Elongation factor Tu GTP binding domain AB285_18350 PF08529 NusA N-terminal domain AB285_18350 PF13184 NusA-like KH domain AB285_18355 PF17384 RimP C-terminal SH3 domain AB285_18355 PF02576 RimP N-terminal domain AB285_18365 PF00764 Arginosuccinate synthase AB285_18375 PF03840 Preprotein translocase SecG subunit AB285_18380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB285_18380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB285_18380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB285_18380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB285_18385 PF00809 Pterin binding enzyme AB285_18390 PF01434 Peptidase family M41 AB285_18390 PF17862 AAA+ lid domain AB285_18390 PF06480 FtsH Extracellular AB285_18390 PF00004 ATPase family associated with various cellular activities (AAA) AB285_18395 PF01728 FtsJ-like methyltransferase AB285_18400 PF01985 CRS1 / YhbY (CRM) domain AB285_18405 PF03449 Transcription elongation factor, N-terminal AB285_18405 PF01272 Transcription elongation factor, GreA/GreB, C-term AB285_18410 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AB285_18415 PF00486 Transcriptional regulatory protein, C terminal AB285_18415 PF00072 Response regulator receiver domain AB285_18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_18420 PF00672 HAMP domain AB285_18420 PF00512 His Kinase A (phospho-acceptor) domain AB285_18425 PF01926 50S ribosome-binding GTPase AB285_18425 PF01018 GTP1/OBG AB285_18430 PF00892 EamA-like transporter family AB285_18435 PF01016 Ribosomal L27 protein AB285_18440 PF00829 Ribosomal prokaryotic L21 protein AB285_18445 PF00348 Polyprenyl synthetase AB285_18450 PF13693 Winged helix-turn-helix DNA-binding AB285_18455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB285_18460 PF01722 BolA-like protein AB285_18465 PF13466 STAS domain AB285_18470 PF05494 MlaC protein AB285_18475 PF02470 MlaD protein AB285_18480 PF02405 Permease MlaE AB285_18485 PF00005 ABC transporter AB285_18490 PF01699 Sodium/calcium exchanger protein AB285_18495 PF01380 SIS domain AB285_18495 PF00571 CBS domain AB285_18505 PF06835 Lipopolysaccharide-assembly, LptC-related AB285_18510 PF03968 OstA-like protein AB285_18515 PF12399 Branched-chain amino acid ATP-binding cassette transporter AB285_18515 PF00005 ABC transporter AB285_18520 PF04552 Sigma-54, DNA binding domain AB285_18520 PF04963 Sigma-54 factor, core binding domain AB285_18520 PF00309 Sigma-54 factor, Activator interacting domain (AID) AB285_18525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AB285_18530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_18535 PF03668 P-loop ATPase protein family AB285_18540 PF00381 PTS HPr component phosphorylation site AB285_18545 PF00912 Transglycosylase AB285_18555 PF00512 His Kinase A (phospho-acceptor) domain AB285_18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_18555 PF18415 Histidine kinase receptor ArcB trans-membrane domain AB285_18555 PF01627 Hpt domain AB285_18555 PF00989 PAS fold AB285_18555 PF00072 Response regulator receiver domain AB285_18560 PF03739 Lipopolysaccharide export system permease LptF/LptG AB285_18565 PF03739 Lipopolysaccharide export system permease LptF/LptG AB285_18570 PF00883 Cytosol aminopeptidase family, catalytic domain AB285_18570 PF02789 Cytosol aminopeptidase family, N-terminal domain AB285_18575 PF04364 DNA polymerase III chi subunit, HolC AB285_18580 PF00133 tRNA synthetases class I (I, L, M and V) AB285_18580 PF10458 Valyl tRNA synthetase tRNA binding arm AB285_18580 PF08264 Anticodon-binding domain of tRNA AB285_18585 PF00583 Acetyltransferase (GNAT) family AB285_18590 PF00107 Zinc-binding dehydrogenase AB285_18590 PF08240 Alcohol dehydrogenase GroES-like domain AB285_18595 PF02734 DAK2 domain AB285_18595 PF02733 Dak1 domain AB285_18600 PF05872 Bacterial protein of unknown function (DUF853) AB285_18605 PF16199 Radical_SAM C-terminal domain AB285_18605 PF04055 Radical SAM superfamily AB285_18610 PF01493 GXGXG motif AB285_18610 PF04898 Glutamate synthase central domain AB285_18610 PF00310 Glutamine amidotransferases class-II AB285_18610 PF01645 Conserved region in glutamate synthase AB285_18615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AB285_18615 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_18620 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB285_18625 PF07969 Amidohydrolase family AB285_18630 PF04074 YhcH/YjgK/YiaL AB285_18635 PF00480 ROK family AB285_18640 PF07690 Major Facilitator Superfamily AB285_18645 PF00701 Dihydrodipicolinate synthetase family AB285_18650 PF00392 Bacterial regulatory proteins, gntR family AB285_18650 PF07729 FCD domain AB285_18655 PF04386 Stringent starvation protein B AB285_18660 PF02798 Glutathione S-transferase, N-terminal domain AB285_18660 PF00043 Glutathione S-transferase, C-terminal domain AB285_18665 PF00380 Ribosomal protein S9/S16 AB285_18670 PF00572 Ribosomal protein L13 AB285_18675 PF03969 AFG1-like ATPase AB285_18680 PF06295 Protein of unknown function (DUF1043) AB285_18685 PF13180 PDZ domain AB285_18685 PF00595 PDZ domain AB285_18690 PF13180 PDZ domain AB285_18695 PF00056 lactate/malate dehydrogenase, NAD binding domain AB285_18695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AB285_18700 PF02863 Arginine repressor, C-terminal domain AB285_18700 PF01316 Arginine repressor, DNA binding domain AB285_18705 PF07338 Protein of unknown function (DUF1471) AB285_18710 PF01337 Barstar (barnase inhibitor) AB285_18715 PF00171 Aldehyde dehydrogenase family AB285_18720 PF04632 Fusaric acid resistance protein family AB285_18725 PF13533 Biotin-lipoyl like AB285_18730 PF07869 Protein of unknown function (DUF1656) AB285_18735 PF03466 LysR substrate binding domain AB285_18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_18740 PF07274 Protein of unknown function (DUF1440) AB285_18745 PF01523 Putative modulator of DNA gyrase AB285_18750 PF13116 Protein of unknown function AB285_18750 PF13502 AsmA-like C-terminal region AB285_18755 PF00575 S1 RNA binding domain AB285_18755 PF10150 Ribonuclease E/G family AB285_18760 PF02545 Maf-like protein AB285_18765 PF04093 rod shape-determining protein MreD AB285_18770 PF04085 rod shape-determining protein MreC AB285_18780 PF00563 EAL domain AB285_18780 PF17157 Gammaproteobacterial periplasmic sensor domain AB285_18780 PF00990 Diguanylate cyclase, GGDEF domain AB285_18785 PF00107 Zinc-binding dehydrogenase AB285_18785 PF08240 Alcohol dehydrogenase GroES-like domain AB285_18790 PF00174 Oxidoreductase molybdopterin binding domain AB285_18795 PF01794 Ferric reductase like transmembrane component AB285_18800 PF01220 Dehydroquinase class II AB285_18805 PF00364 Biotin-requiring enzyme AB285_18810 PF00289 Biotin carboxylase, N-terminal domain AB285_18810 PF02785 Biotin carboxylase C-terminal domain AB285_18810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB285_18815 PF06196 Protein of unknown function (DUF997) AB285_18820 PF00474 Sodium:solute symporter family AB285_18830 PF00194 Eukaryotic-type carbonic anhydrase AB285_18835 PF01207 Dihydrouridine synthase (Dus) AB285_18840 PF02954 Bacterial regulatory protein, Fis family AB285_18845 PF10831 Protein of unknown function (DUF2556) AB285_18855 PF00440 Bacterial regulatory proteins, tetR family AB285_18855 PF08361 MAATS-type transcriptional repressor, C-terminal region AB285_18860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_18860 PF00529 HlyD membrane-fusion protein of T1SS AB285_18865 PF00873 AcrB/AcrD/AcrF family AB285_18905 PF01177 Asp/Glu/Hydantoin racemase AB285_18910 PF07715 TonB-dependent Receptor Plug Domain AB285_18910 PF00593 TonB dependent receptor AB285_18915 PF05958 tRNA (Uracil-5-)-methyltransferase AB285_18920 PF07226 Protein of unknown function (DUF1422) AB285_18925 PF00440 Bacterial regulatory proteins, tetR family AB285_18930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB285_18930 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_18935 PF03466 LysR substrate binding domain AB285_18940 PF14698 Argininosuccinate lyase C-terminal AB285_18940 PF00206 Lyase AB285_18945 PF00696 Amino acid kinase family AB285_18950 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB285_18950 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB285_18955 PF07687 Peptidase dimerisation domain AB285_18955 PF01546 Peptidase family M20/M25/M40 AB285_18960 PF00311 Phosphoenolpyruvate carboxylase AB285_18965 PF00923 Transaldolase/Fructose-6-phosphate aldolase AB285_18970 PF00465 Iron-containing alcohol dehydrogenase AB285_18975 PF00141 Peroxidase AB285_18980 PF02219 Methylenetetrahydrofolate reductase AB285_18985 PF03447 Homoserine dehydrogenase, NAD binding domain AB285_18985 PF00742 Homoserine dehydrogenase AB285_18985 PF00696 Amino acid kinase family AB285_18990 PF01053 Cys/Met metabolism PLP-dependent enzyme AB285_18995 PF01340 Met Apo-repressor, MetJ AB285_19000 PF01197 Ribosomal protein L31 AB285_19005 PF18074 Primosomal protein N C-terminal domain AB285_19005 PF17764 3′ DNA-binding domain (3′BD) AB285_19005 PF00271 Helicase conserved C-terminal domain AB285_19005 PF00270 DEAD/DEAH box helicase AB285_19005 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AB285_19010 PF00356 Bacterial regulatory proteins, lacI family AB285_19015 PF05036 Sporulation related domain AB285_19020 PF00227 Proteasome subunit AB285_19025 PF00004 ATPase family associated with various cellular activities (AAA) AB285_19025 PF10431 C-terminal, D2-small domain, of ClpB protein AB285_19025 PF07724 AAA domain (Cdc48 subfamily) AB285_19030 PF01040 UbiA prenyltransferase family AB285_19035 PF03737 Aldolase/RraA AB285_19045 PF06005 Cell division protein ZapB AB285_19050 PF00230 Major intrinsic protein AB285_19055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_19055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_19060 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AB285_19065 PF00175 Oxidoreductase NAD-binding domain AB285_19065 PF00970 Oxidoreductase FAD-binding domain AB285_19070 PF05656 Protein of unknown function (DUF805) AB285_19075 PF07305 Protein of unknown function (DUF1454) AB285_19080 PF00121 Triosephosphate isomerase AB285_19090 PF02611 CDP-diacylglycerol pyrophosphatase AB285_19100 PF00365 Phosphofructokinase AB285_19105 PF16916 Dimerisation domain of Zinc Transporter AB285_19105 PF01545 Cation efflux family AB285_19110 PF07813 LTXXQ motif family protein AB285_19115 PF00486 Transcriptional regulatory protein, C terminal AB285_19115 PF00072 Response regulator receiver domain AB285_19120 PF00512 His Kinase A (phospho-acceptor) domain AB285_19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_19120 PF00672 HAMP domain AB285_19120 PF16527 Two-component sensor protein CpxA, periplasmic domain AB285_19125 PF03475 3-alpha domain AB285_19125 PF03473 MOSC domain AB285_19130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AB285_19130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AB285_19135 PF06379 L-rhamnose-proton symport protein (RhaT) AB285_19140 PF02311 AraC-like ligand binding domain AB285_19140 PF12833 Helix-turn-helix domain AB285_19145 PF12833 Helix-turn-helix domain AB285_19145 PF02311 AraC-like ligand binding domain AB285_19155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_19155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_19160 PF06134 L-rhamnose isomerase (RhaA) AB285_19165 PF00596 Class II Aldolase and Adducin N-terminal domain AB285_19170 PF13407 Periplasmic binding protein domain AB285_19175 PF00005 ABC transporter AB285_19180 PF02653 Branched-chain amino acid transport system / permease component AB285_19185 PF02653 Branched-chain amino acid transport system / permease component AB285_19190 PF00465 Iron-containing alcohol dehydrogenase AB285_19195 PF05336 L-rhamnose mutarotase AB285_19200 PF01306 LacY proton/sugar symporter AB285_19205 PF16875 Glycosyl hydrolase family 36 N-terminal domain AB285_19205 PF16874 Glycosyl hydrolase family 36 C-terminal domain AB285_19210 PF00356 Bacterial regulatory proteins, lacI family AB285_19210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_19220 PF03591 AzlC protein AB285_19235 PF00577 Outer membrane usher protein AB285_19235 PF13954 PapC N-terminal domain AB285_19235 PF13953 PapC C-terminal domain AB285_19240 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_19255 PF02634 FdhD/NarQ family AB285_19260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_19260 PF00384 Molybdopterin oxidoreductase AB285_19260 PF01568 Molydopterin dinucleotide binding domain AB285_19265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_19265 PF00384 Molybdopterin oxidoreductase AB285_19265 PF01568 Molydopterin dinucleotide binding domain AB285_19270 PF09163 Formate dehydrogenase N, transmembrane AB285_19270 PF13247 4Fe-4S dicluster domain AB285_19275 PF01292 Prokaryotic cytochrome b561 AB285_19280 PF04216 Protein involved in formate dehydrogenase formation AB285_19295 PF07859 alpha/beta hydrolase fold AB285_19300 PF09500 Putative thioesterase (yiiD_Cterm) AB285_19300 PF00583 Acetyltransferase (GNAT) family AB285_19305 PF02580 D-Tyr-tRNA(Tyr) deacylase AB285_19310 PF03631 Virulence factor BrkB AB285_19315 PF13419 Haloacid dehalogenase-like hydrolase AB285_19320 PF00455 DeoR C terminal sensor domain AB285_19320 PF08220 DeoR-like helix-turn-helix domain AB285_19325 PF00294 pfkB family carbohydrate kinase AB285_19330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB285_19330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB285_19335 PF01791 DeoC/LacD family aldolase AB285_19345 PF01055 Glycosyl hydrolases family 31 AB285_19360 PF01548 Transposase AB285_19360 PF02371 Transposase IS116/IS110/IS902 family AB285_19365 PF06178 Oligogalacturonate-specific porin protein (KdgM) AB285_19375 PF03951 Glutamine synthetase, beta-Grasp domain AB285_19375 PF00120 Glutamine synthetase, catalytic domain AB285_19380 PF00512 His Kinase A (phospho-acceptor) domain AB285_19380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_19380 PF00989 PAS fold AB285_19385 PF00072 Response regulator receiver domain AB285_19385 PF00158 Sigma-54 interaction domain AB285_19385 PF02954 Bacterial regulatory protein, Fis family AB285_19395 PF06969 HemN C-terminal domain AB285_19395 PF04055 Radical SAM superfamily AB285_19400 PF04220 Der GTPase activator (YihI) AB285_19405 PF01926 50S ribosome-binding GTPase AB285_19410 PF01612 3'-5' exonuclease AB285_19410 PF01367 5'-3' exonuclease, C-terminal SAM fold AB285_19410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AB285_19410 PF00476 DNA polymerase family A AB285_19415 PF01553 Acyltransferase AB285_19420 PF01323 DSBA-like thioredoxin domain AB285_19425 PF01636 Phosphotransferase enzyme family AB285_19430 PF06288 Protein of unknown function (DUF1040) AB285_19435 PF12804 MobA-like NTP transferase domain AB285_19440 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AB285_19465 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_19470 PF07369 Protein of unknown function (DUF1488) AB285_19475 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AB285_19475 PF01488 Shikimate / quinate 5-dehydrogenase AB285_19475 PF08501 Shikimate dehydrogenase substrate binding domain AB285_19480 PF01300 Telomere recombination AB285_19485 PF01396 Topoisomerase DNA binding C4 zinc finger AB285_19490 PF04361 Protein of unknown function (DUF494) AB285_19495 PF02481 DNA recombination-mediator protein A AB285_19495 PF17782 DprA winged helix domain AB285_19500 PF01327 Polypeptide deformylase AB285_19505 PF00551 Formyl transferase AB285_19505 PF02911 Formyl transferase, C-terminal domain AB285_19510 PF01189 16S rRNA methyltransferase RsmB/F AB285_19510 PF01029 NusB family AB285_19515 PF02080 TrkA-C domain AB285_19515 PF02254 TrkA-N domain AB285_19520 PF01741 Large-conductance mechanosensitive channel, MscL AB285_19525 PF03889 Alternative ribosome-rescue factor A AB285_19530 PF13411 MerR HTH family regulatory protein AB285_19535 PF09350 Domain of unknown function (DUF1992) AB285_19540 PF01196 Ribosomal protein L17 AB285_19545 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AB285_19545 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AB285_19545 PF01000 RNA polymerase Rpb3/RpoA insert domain AB285_19550 PF00163 Ribosomal protein S4/S9 N-terminal domain AB285_19550 PF01479 S4 domain AB285_19555 PF00411 Ribosomal protein S11 AB285_19560 PF00416 Ribosomal protein S13/S18 AB285_19565 PF00444 Ribosomal protein L36 AB285_19570 PF00344 SecY translocase AB285_19575 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AB285_19580 PF00327 Ribosomal protein L30p/L7e AB285_19585 PF03719 Ribosomal protein S5, C-terminal domain AB285_19585 PF00333 Ribosomal protein S5, N-terminal domain AB285_19590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AB285_19595 PF00347 Ribosomal protein L6 AB285_19600 PF00410 Ribosomal protein S8 AB285_19605 PF00253 Ribosomal protein S14p/S29e AB285_19610 PF00673 ribosomal L5P family C-terminus AB285_19610 PF00281 Ribosomal protein L5 AB285_19615 PF00467 KOW motif AB285_19615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AB285_19620 PF00238 Ribosomal protein L14p/L23e AB285_19625 PF00366 Ribosomal protein S17 AB285_19630 PF00831 Ribosomal L29 protein AB285_19635 PF00252 Ribosomal protein L16p/L10e AB285_19640 PF00189 Ribosomal protein S3, C-terminal domain AB285_19640 PF07650 KH domain AB285_19645 PF00237 Ribosomal protein L22p/L17e AB285_19650 PF00203 Ribosomal protein S19 AB285_19655 PF03947 Ribosomal Proteins L2, C-terminal domain AB285_19655 PF00181 Ribosomal Proteins L2, RNA binding domain AB285_19660 PF00276 Ribosomal protein L23 AB285_19665 PF00573 Ribosomal protein L4/L1 family AB285_19670 PF00297 Ribosomal protein L3 AB285_19675 PF00338 Ribosomal protein S10p/S20e AB285_19680 PF01478 Type IV leader peptidase family AB285_19685 PF00210 Ferritin-like domain AB285_19690 PF04324 BFD-like [2Fe-2S] binding domain AB285_19695 PF00009 Elongation factor Tu GTP binding domain AB285_19695 PF03144 Elongation factor Tu domain 2 AB285_19695 PF03143 Elongation factor Tu C-terminal domain AB285_19700 PF00009 Elongation factor Tu GTP binding domain AB285_19700 PF03764 Elongation factor G, domain IV AB285_19700 PF14492 Elongation Factor G, domain II AB285_19700 PF00679 Elongation factor G C-terminus AB285_19700 PF03144 Elongation factor Tu domain 2 AB285_19705 PF00177 Ribosomal protein S7p/S5e AB285_19710 PF00164 Ribosomal protein S12/S23 AB285_19715 PF04077 DsrH like protein AB285_19720 PF02635 DsrE/DsrF-like family AB285_19725 PF02635 DsrE/DsrF-like family AB285_19730 PF08348 YheO-like PAS domain AB285_19730 PF13309 HTH domain AB285_19735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB285_19735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB285_19740 PF04102 SlyX AB285_19745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB285_19750 PF09526 Probable metal-binding protein (DUF2387) AB285_19755 PF02254 TrkA-N domain AB285_19755 PF00999 Sodium/hydrogen exchanger family AB285_19760 PF02525 Flavodoxin-like fold AB285_19765 PF00005 ABC transporter AB285_19765 PF12848 ABC transporter AB285_19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_19770 PF03466 LysR substrate binding domain AB285_19775 PF00698 Acyl transferase domain AB285_19780 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AB285_19785 PF03547 Membrane transport protein AB285_19795 PF01039 Carboxyl transferase domain AB285_19800 PF06857 Malonate decarboxylase delta subunit (MdcD) AB285_19805 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AB285_19810 PF16957 Malonate decarboxylase, alpha subunit, transporter AB285_19820 PF00561 alpha/beta hydrolase fold AB285_19825 PF06794 Uncharacterised protein family (UPF0270) AB285_19830 PF00485 Phosphoribulokinase / Uridine kinase family AB285_19835 PF02566 OsmC-like protein AB285_19840 PF13545 Crp-like helix-turn-helix domain AB285_19840 PF00027 Cyclic nucleotide-binding domain AB285_19845 PF12805 FUSC-like inner membrane protein yccS AB285_19850 PF00202 Aminotransferase class-III AB285_19855 PF00117 Glutamine amidotransferase class-I AB285_19860 PF02661 Fic/DOC family AB285_19865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB285_19870 PF07690 Major Facilitator Superfamily AB285_19875 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_19875 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB285_19875 PF04324 BFD-like [2Fe-2S] binding domain AB285_19875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB285_19875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB285_19880 PF13806 Rieske-like [2Fe-2S] domain AB285_19885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB285_19885 PF14824 Sirohaem biosynthesis protein central AB285_19885 PF10414 Sirohaem synthase dimerisation region AB285_19890 PF13978 Protein of unknown function (DUF4223) AB285_19895 PF00579 tRNA synthetases class I (W and Y) AB285_19900 PF13419 Haloacid dehalogenase-like hydrolase AB285_19905 PF00834 Ribulose-phosphate 3 epimerase family AB285_19910 PF02086 D12 class N6 adenine-specific DNA methyltransferase AB285_19915 PF05036 Sporulation related domain AB285_19920 PF01761 3-dehydroquinate synthase AB285_19925 PF01202 Shikimate kinase AB285_19935 PF03958 Bacterial type II/III secretion system short domain AB285_19935 PF00263 Bacterial type II and III secretion system protein AB285_19960 PF17092 Penicillin-binding protein OB-like domain AB285_19960 PF00912 Transglycosylase AB285_19960 PF00905 Penicillin binding protein transpeptidase domain AB285_19965 PF00293 NUDIX domain AB285_19975 PF07095 Intracellular growth attenuator protein IgaA AB285_19980 PF13419 Haloacid dehalogenase-like hydrolase AB285_19985 PF01479 S4 domain AB285_19990 PF01430 Hsp33 protein AB285_19995 PF01293 Phosphoenolpyruvate carboxykinase AB285_20000 PF00512 His Kinase A (phospho-acceptor) domain AB285_20000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_20000 PF00672 HAMP domain AB285_20005 PF00486 Transcriptional regulatory protein, C terminal AB285_20005 PF00072 Response regulator receiver domain AB285_20010 PF01272 Transcription elongation factor, GreA/GreB, C-term AB285_20010 PF03449 Transcription elongation factor, N-terminal AB285_20015 PF17674 HHH domain AB285_20015 PF00575 S1 RNA binding domain AB285_20015 PF09371 Tex-like protein N-terminal domain AB285_20015 PF16921 Tex protein YqgF-like domain AB285_20020 PF04023 FeoA domain AB285_20025 PF02421 Ferrous iron transport protein B AB285_20025 PF07664 Ferrous iron transport protein B C terminus AB285_20025 PF07670 Nucleoside recognition AB285_20025 PF17910 FeoB cytosolic helical domain AB285_20030 PF09012 FeoC like transcriptional regulator AB285_20035 PF00561 alpha/beta hydrolase fold AB285_20040 PF00156 Phosphoribosyl transferase domain AB285_20045 PF01521 Iron-sulphur cluster biosynthesis AB285_20045 PF01106 NifU-like domain AB285_20050 PF02447 GntP family permease AB285_20055 PF02446 4-alpha-glucanotransferase AB285_20060 PF00343 Carbohydrate phosphorylase AB285_20070 PF00455 DeoR C terminal sensor domain AB285_20070 PF08220 DeoR-like helix-turn-helix domain AB285_20075 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AB285_20075 PF01694 Rhomboid family AB285_20080 PF00581 Rhodanese-like domain AB285_20090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AB285_20090 PF01266 FAD dependent oxidoreductase AB285_20095 PF00343 Carbohydrate phosphorylase AB285_20100 PF00534 Glycosyl transferases group 1 AB285_20100 PF08323 Starch synthase catalytic domain AB285_20105 PF00483 Nucleotidyl transferase AB285_20110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AB285_20110 PF00128 Alpha amylase, catalytic domain AB285_20110 PF18390 Glycogen debranching enzyme C-terminal domain AB285_20115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AB285_20115 PF00128 Alpha amylase, catalytic domain AB285_20115 PF02806 Alpha amylase, C-terminal all-beta domain AB285_20120 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB285_20120 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB285_20130 PF01914 MarC family integral membrane protein AB285_20135 PF02447 GntP family permease AB285_20140 PF01202 Shikimate kinase AB285_20145 PF00356 Bacterial regulatory proteins, lacI family AB285_20145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AB285_20150 PF17954 Quercetinase C-terminal cupin domain AB285_20150 PF02678 Pirin AB285_20155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB285_20155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AB285_20160 PF00583 Acetyltransferase (GNAT) family AB285_20170 PF10956 Protein of unknown function (DUF2756) AB285_20175 PF03009 Glycerophosphoryl diester phosphodiesterase family AB285_20180 PF17912 MalK OB fold domain AB285_20180 PF00005 ABC transporter AB285_20185 PF00528 Binding-protein-dependent transport system inner membrane component AB285_20190 PF00528 Binding-protein-dependent transport system inner membrane component AB285_20195 PF13416 Bacterial extracellular solute-binding protein AB285_20200 PF00005 ABC transporter AB285_20205 PF00005 ABC transporter AB285_20205 PF12399 Branched-chain amino acid ATP-binding cassette transporter AB285_20210 PF11862 Domain of unknown function (DUF3382) AB285_20210 PF02653 Branched-chain amino acid transport system / permease component AB285_20215 PF02653 Branched-chain amino acid transport system / permease component AB285_20220 PF13458 Periplasmic binding protein AB285_20235 PF12568 Acetyltransferase (GNAT) domain, PanZ AB285_20240 PF13458 Periplasmic binding protein AB285_20245 PF00202 Aminotransferase class-III AB285_20250 PF04545 Sigma-70, region 4 AB285_20250 PF04542 Sigma-70 region 2 AB285_20250 PF00140 Sigma-70 factor, region 1.2 AB285_20255 PF18075 FtsX extracellular domain AB285_20255 PF02687 FtsX-like permease family AB285_20260 PF00005 ABC transporter AB285_20265 PF00448 SRP54-type protein, GTPase domain AB285_20265 PF02881 SRP54-type protein, helical bundle domain AB285_20275 PF06611 Protein of unknown function (DUF1145) AB285_20280 PF10694 Protein of unknown function (DUF2500) AB285_20285 PF07947 YhhN family AB285_20290 PF00403 Heavy-metal-associated domain AB285_20295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AB285_20305 PF03480 Bacterial extracellular solute-binding protein, family 7 AB285_20310 PF01206 Sulfurtransferase TusA AB285_20315 PF02592 Putative vitamin uptake transporter AB285_20320 PF08786 DcrB AB285_20325 PF01594 AI-2E family transporter AB285_20340 PF00550 Phosphopantetheine attachment site AB285_20345 PF00550 Phosphopantetheine attachment site AB285_20365 PF00535 Glycosyl transferase family 2 AB285_20390 PF00109 Beta-ketoacyl synthase, N-terminal domain AB285_20390 PF02801 Beta-ketoacyl synthase, C-terminal domain AB285_20405 PF00109 Beta-ketoacyl synthase, N-terminal domain AB285_20405 PF02801 Beta-ketoacyl synthase, C-terminal domain AB285_20410 PF01648 4'-phosphopantetheinyl transferase superfamily AB285_20420 PF00892 EamA-like transporter family AB285_20425 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AB285_20430 PF01522 Polysaccharide deacetylase AB285_20435 PF01370 NAD dependent epimerase/dehydratase family AB285_20435 PF02911 Formyl transferase, C-terminal domain AB285_20435 PF00551 Formyl transferase AB285_20440 PF00535 Glycosyl transferase family 2 AB285_20445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AB285_20450 PF13610 DDE domain AB285_20455 PF03741 Integral membrane protein TerC family AB285_20465 PF00106 short chain dehydrogenase AB285_20470 PF03466 LysR substrate binding domain AB285_20470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_20475 PF05870 Phenolic acid decarboxylase (PAD) AB285_20480 PF13610 DDE domain AB285_20490 PF01476 LysM domain AB285_20490 PF08525 Opacity-associated protein A N-terminal motif AB285_20490 PF01551 Peptidase family M23 AB285_20500 PF04945 YHS domain AB285_20510 PF00873 AcrB/AcrD/AcrF family AB285_20515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_20520 PF11604 Copper binding periplasmic protein CusF AB285_20525 PF02321 Outer membrane efflux protein AB285_20535 PF00072 Response regulator receiver domain AB285_20535 PF00486 Transcriptional regulatory protein, C terminal AB285_20540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_20540 PF00672 HAMP domain AB285_20540 PF00512 His Kinase A (phospho-acceptor) domain AB285_20550 PF13737 Transposase DDE domain AB285_20585 PF13401 AAA domain AB285_20585 PF11426 Tn7 transposition regulator TnsC AB285_20590 PF00665 Integrase core domain AB285_20595 PF08721 TnsA endonuclease C terminal AB285_20595 PF08722 TnsA endonuclease N terminal AB285_20605 PF01384 Phosphate transporter family AB285_20610 PF10625 Universal stress protein B (UspB) AB285_20615 PF00582 Universal stress protein family AB285_20620 PF04445 Putative SAM-dependent methyltransferase AB285_20625 PF01432 Peptidase family M3 AB285_20630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AB285_20635 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB285_20635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB285_20645 PF01204 Trehalase AB285_20655 PF13302 Acetyltransferase (GNAT) domain AB285_20665 PF00196 Bacterial regulatory proteins, luxR family AB285_20675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_20675 PF03466 LysR substrate binding domain AB285_20680 PF03631 Virulence factor BrkB AB285_20685 PF07690 Major Facilitator Superfamily AB285_20685 PF00083 Sugar (and other) transporter AB285_20690 PF05170 AsmA family AB285_20695 PF00563 EAL domain AB285_20700 PF00294 pfkB family carbohydrate kinase AB285_20705 PF00675 Insulinase (Peptidase family M16) AB285_20705 PF05193 Peptidase M16 inactive domain AB285_20710 PF00375 Sodium:dicarboxylate symporter family AB285_20715 PF00672 HAMP domain AB285_20715 PF00990 Diguanylate cyclase, GGDEF domain AB285_20715 PF17154 Gammaproteobacterial periplasmic sensor domain AB285_20715 PF00563 EAL domain AB285_20720 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AB285_20725 PF01270 Glycosyl hydrolases family 8 AB285_20730 PF03170 Bacterial cellulose synthase subunit AB285_20740 PF06564 Cellulose biosynthesis protein BcsQ AB285_20745 PF10945 Cellulose biosynthesis protein BcsR AB285_20750 PF10995 Cellulose biosynthesis GIL AB285_20755 PF11120 Cellulose biosynthesis protein BcsF AB285_20760 PF11658 Cellulose biosynthesis protein BcsG AB285_20765 PF02237 Biotin protein ligase C terminal domain AB285_20765 PF03099 Biotin/lipoate A/B protein ligase family AB285_20765 PF08279 HTH domain AB285_20770 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AB285_20770 PF01565 FAD binding domain AB285_20800 PF12724 Flavodoxin domain AB285_20805 PF02386 Cation transport protein AB285_20810 PF09186 Domain of unknown function (DUF1949) AB285_20810 PF01205 Uncharacterized protein family UPF0029 AB285_20815 PF00557 Metallopeptidase family M24 AB285_20820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB285_20820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB285_20820 PF00378 Enoyl-CoA hydratase/isomerase AB285_20825 PF02803 Thiolase, C-terminal domain AB285_20825 PF00108 Thiolase, N-terminal domain AB285_20830 PF05746 DALR anticodon binding domain AB285_20830 PF02092 Glycyl-tRNA synthetase beta subunit AB285_20835 PF02091 Glycyl-tRNA synthetase alpha subunit AB285_20840 PF13983 YsaB-like lipoprotein AB285_20845 PF01757 Acyltransferase family AB285_20850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_20850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_20860 PF13407 Periplasmic binding protein domain AB285_20865 PF00005 ABC transporter AB285_20870 PF02653 Branched-chain amino acid transport system / permease component AB285_20875 PF12833 Helix-turn-helix domain AB285_20880 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AB285_20885 PF00128 Alpha amylase, catalytic domain AB285_20890 PF00155 Aminotransferase class I and II AB285_20895 PF13247 4Fe-4S dicluster domain AB285_20900 PF01614 Bacterial transcriptional regulator AB285_20900 PF09339 IclR helix-turn-helix domain AB285_20905 PF02615 Malate/L-lactate dehydrogenase AB285_20910 PF04074 YhcH/YjgK/YiaL AB285_20915 PF16154 Domain of unknown function (DUF4862) AB285_20920 PF07690 Major Facilitator Superfamily AB285_20925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB285_20925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB285_20930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB285_20935 PF01261 Xylose isomerase-like TIM barrel AB285_20940 PF00596 Class II Aldolase and Adducin N-terminal domain AB285_20945 PF02311 AraC-like ligand binding domain AB285_20945 PF12833 Helix-turn-helix domain AB285_20955 PF07944 Beta-L-arabinofuranosidase, GH127 AB285_20960 PF00171 Aldehyde dehydrogenase family AB285_20965 PF00480 ROK family AB285_20970 PF09107 Elongation factor SelB, winged helix AB285_20970 PF03144 Elongation factor Tu domain 2 AB285_20970 PF09106 Elongation factor SelB, winged helix AB285_20970 PF00009 Elongation factor Tu GTP binding domain AB285_20975 PF12390 Selenocysteine synthase N terminal AB285_20975 PF03841 L-seryl-tRNA selenium transferase AB285_20980 PF13417 Glutathione S-transferase, N-terminal domain AB285_20980 PF00043 Glutathione S-transferase, C-terminal domain AB285_20985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB285_20985 PF02378 Phosphotransferase system, EIIC AB285_20985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_20990 PF01232 Mannitol dehydrogenase Rossmann domain AB285_20990 PF08125 Mannitol dehydrogenase C-terminal domain AB285_20995 PF05068 Mannitol repressor AB285_21000 PF10928 Protein of unknown function (DUF2810) AB285_21010 PF00577 Outer membrane usher protein AB285_21010 PF13954 PapC N-terminal domain AB285_21010 PF13953 PapC C-terminal domain AB285_21015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_21015 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_21020 PF00419 Fimbrial protein AB285_21025 PF02652 L-lactate permease AB285_21030 PF07729 FCD domain AB285_21030 PF00392 Bacterial regulatory proteins, gntR family AB285_21035 PF01070 FMN-dependent dehydrogenase AB285_21040 PF07690 Major Facilitator Superfamily AB285_21045 PF00588 SpoU rRNA Methylase family AB285_21050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AB285_21050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AB285_21055 PF03466 LysR substrate binding domain AB285_21055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_21060 PF00291 Pyridoxal-phosphate dependent enzyme AB285_21060 PF00585 C-terminal regulatory domain of Threonine dehydratase AB285_21065 PF00920 Dehydratase family AB285_21070 PF01063 Amino-transferase class IV AB285_21080 PF00205 Thiamine pyrophosphate enzyme, central domain AB285_21080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_21080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_21085 PF13335 Magnesium chelatase, subunit ChlI C-terminal AB285_21085 PF01078 Magnesium chelatase, subunit ChlI AB285_21090 PF04219 Protein of unknown function, DUF AB285_21095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_21095 PF03466 LysR substrate binding domain AB285_21135 PF07729 FCD domain AB285_21135 PF00392 Bacterial regulatory proteins, gntR family AB285_21140 PF07690 Major Facilitator Superfamily AB285_21145 PF00356 Bacterial regulatory proteins, lacI family AB285_21150 PF00294 pfkB family carbohydrate kinase AB285_21155 PF13407 Periplasmic binding protein domain AB285_21160 PF02653 Branched-chain amino acid transport system / permease component AB285_21165 PF00005 ABC transporter AB285_21170 PF05025 RbsD / FucU transport protein family AB285_21175 PF02705 K+ potassium transporter AB285_21180 PF17868 AAA lid domain AB285_21180 PF12592 Protein of unknown function (DUF3763) AB285_21180 PF07728 AAA domain (dynein-related subfamily) AB285_21185 PF05762 VWA domain containing CoxE-like protein AB285_21190 PF03590 Aspartate-ammonia ligase AB285_21195 PF01037 Lrp/AsnC ligand binding domain AB285_21200 PF00258 Flavodoxin AB285_21205 PF13932 GidA associated domain AB285_21205 PF01134 Glucose inhibited division protein A AB285_21210 PF02527 rRNA small subunit methyltransferase G AB285_21215 PF03899 ATP synthase I chain AB285_21220 PF00119 ATP synthase A chain AB285_21225 PF00137 ATP synthase subunit C AB285_21230 PF00430 ATP synthase B/B' CF(0) AB285_21235 PF00213 ATP synthase delta (OSCP) subunit AB285_21240 PF00306 ATP synthase alpha/beta chain, C terminal domain AB285_21240 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB285_21240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB285_21245 PF00231 ATP synthase AB285_21250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB285_21250 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB285_21255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AB285_21255 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AB285_21260 PF12804 MobA-like NTP transferase domain AB285_21260 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_21265 PF01380 SIS domain AB285_21270 PF12849 PBP superfamily domain AB285_21275 PF00528 Binding-protein-dependent transport system inner membrane component AB285_21280 PF00528 Binding-protein-dependent transport system inner membrane component AB285_21285 PF00005 ABC transporter AB285_21290 PF01895 PhoU domain AB285_21295 PF13419 Haloacid dehalogenase-like hydrolase AB285_21300 PF00860 Permease family AB285_21305 PF03358 NADPH-dependent FMN reductase AB285_21315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_21315 PF03466 LysR substrate binding domain AB285_21320 PF07690 Major Facilitator Superfamily AB285_21325 PF01926 50S ribosome-binding GTPase AB285_21325 PF12631 MnmE helical domain AB285_21325 PF10396 GTP-binding protein TrmE N-terminus AB285_21330 PF14849 YidC periplasmic domain AB285_21330 PF02096 60Kd inner membrane protein AB285_21335 PF00825 Ribonuclease P AB285_21340 PF00468 Ribosomal protein L34 AB285_21345 PF08299 Bacterial dnaA protein helix-turn-helix AB285_21345 PF00308 Bacterial dnaA protein AB285_21345 PF11638 DnaA N-terminal domain AB285_21350 PF02768 DNA polymerase III beta subunit, C-terminal domain AB285_21350 PF02767 DNA polymerase III beta subunit, central domain AB285_21350 PF00712 DNA polymerase III beta subunit, N-terminal domain AB285_21355 PF02463 RecF/RecN/SMC N terminal domain AB285_21360 PF18053 DNA gyrase B subunit insert domain AB285_21360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_21360 PF01751 Toprim domain AB285_21360 PF00204 DNA gyrase B AB285_21360 PF00986 DNA gyrase B subunit, carboxyl terminus AB285_21365 PF00392 Bacterial regulatory proteins, gntR family AB285_21365 PF07729 FCD domain AB285_21370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB285_21370 PF13378 Enolase C-terminal domain-like AB285_21375 PF08125 Mannitol dehydrogenase C-terminal domain AB285_21375 PF01232 Mannitol dehydrogenase Rossmann domain AB285_21380 PF00107 Zinc-binding dehydrogenase AB285_21380 PF08240 Alcohol dehydrogenase GroES-like domain AB285_21385 PF02615 Malate/L-lactate dehydrogenase AB285_21390 PF07690 Major Facilitator Superfamily AB285_21400 PF07729 FCD domain AB285_21400 PF00392 Bacterial regulatory proteins, gntR family AB285_21405 PF05035 2-keto-3-deoxy-galactonokinase AB285_21410 PF01081 KDPG and KHG aldolase AB285_21415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB285_21415 PF13378 Enolase C-terminal domain-like AB285_21420 PF07690 Major Facilitator Superfamily AB285_21425 PF12566 Protein of unknown function (DUF3748) AB285_21425 PF07676 WD40-like Beta Propeller Repeat AB285_21430 PF07119 Protein of unknown function (DUF1375) AB285_21435 PF00011 Hsp20/alpha crystallin family AB285_21440 PF00011 Hsp20/alpha crystallin family AB285_21445 PF06826 Predicted Permease Membrane Region AB285_21445 PF02080 TrkA-C domain AB285_21450 PF07702 UTRA domain AB285_21450 PF00392 Bacterial regulatory proteins, gntR family AB285_21455 PF00367 phosphotransferase system, EIIB AB285_21455 PF02378 Phosphotransferase system, EIIC AB285_21460 PF11975 Family 4 glycosyl hydrolase C-terminal domain AB285_21460 PF02056 Family 4 glycosyl hydrolase AB285_21465 PF02656 Domain of unknown function (DUF202) AB285_21470 PF02656 Domain of unknown function (DUF202) AB285_21475 PF00291 Pyridoxal-phosphate dependent enzyme AB285_21480 PF02447 GntP family permease AB285_21485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_21485 PF03466 LysR substrate binding domain AB285_21500 PF03743 Bacterial conjugation TrbI-like protein AB285_21505 PF03524 Conjugal transfer protein AB285_21515 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AB285_21530 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AB285_21540 PF04956 TrbC/VIRB2 family AB285_21545 PF00437 Type II/IV secretion system protein AB285_21555 PF02534 Type IV secretory system Conjugative DNA transfer AB285_21560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_21560 PF03466 LysR substrate binding domain AB285_21575 PF00893 Small Multidrug Resistance protein AB285_21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_21585 PF03466 LysR substrate binding domain AB285_21595 PF08360 QacR-like protein, C-terminal region AB285_21595 PF00440 Bacterial regulatory proteins, tetR family AB285_21605 PF00873 AcrB/AcrD/AcrF family AB285_21625 PF00005 ABC transporter AB285_21660 PF13614 AAA domain AB285_21690 PF05284 Protein of unknown function (DUF736) AB285_21700 PF02195 ParB-like nuclease domain AB285_21705 PF06067 Domain of unknown function (DUF932) AB285_21715 PF04002 RadC-like JAB domain AB285_21720 PF06250 YhcG PDDEXK nuclease domain AB285_21720 PF17761 DUF1016 N-terminal domain AB285_21730 PF07690 Major Facilitator Superfamily AB285_21750 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AB285_21755 PF01381 Helix-turn-helix AB285_21760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB285_21760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB285_21760 PF00205 Thiamine pyrophosphate enzyme, central domain AB285_21765 PF01842 ACT domain AB285_21770 PF00072 Response regulator receiver domain AB285_21770 PF00196 Bacterial regulatory proteins, luxR family AB285_21775 PF07730 Histidine kinase AB285_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_21775 PF05231 MASE1 AB285_21780 PF07690 Major Facilitator Superfamily AB285_21785 PF07690 Major Facilitator Superfamily AB285_21790 PF00561 alpha/beta hydrolase fold AB285_21795 PF03466 LysR substrate binding domain AB285_21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_21800 PF06711 Protein of unknown function (DUF1198) AB285_21810 PF07690 Major Facilitator Superfamily AB285_21815 PF00892 EamA-like transporter family AB285_21820 PF02264 LamB porin AB285_21825 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AB285_21830 PF00232 Glycosyl hydrolase family 1 AB285_21835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_21835 PF02378 Phosphotransferase system, EIIC AB285_21840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_21845 PF00356 Bacterial regulatory proteins, lacI family AB285_21855 PF07690 Major Facilitator Superfamily AB285_21860 PF02321 Outer membrane efflux protein AB285_21865 PF00873 AcrB/AcrD/AcrF family AB285_21870 PF00529 HlyD membrane-fusion protein of T1SS AB285_21870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_21875 PF00440 Bacterial regulatory proteins, tetR family AB285_21875 PF16295 Tetracyclin repressor-like, C-terminal domain AB285_21880 PF00583 Acetyltransferase (GNAT) family AB285_21885 PF08361 MAATS-type transcriptional repressor, C-terminal region AB285_21885 PF00440 Bacterial regulatory proteins, tetR family AB285_21890 PF07690 Major Facilitator Superfamily AB285_21895 PF03180 NLPA lipoprotein AB285_21920 PF13953 PapC C-terminal domain AB285_21920 PF13954 PapC N-terminal domain AB285_21920 PF00577 Outer membrane usher protein AB285_21925 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_21925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_21945 PF16449 Fimbrillin MatB AB285_21950 PF18649 EcpB C-terminal domain AB285_21955 PF15976 CS1-pili formation C-terminal AB285_21955 PF16967 E-set like domain AB285_21990 PF00529 HlyD membrane-fusion protein of T1SS AB285_21990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB285_21995 PF12706 Beta-lactamase superfamily domain AB285_22005 PF02463 RecF/RecN/SMC N terminal domain AB285_22010 PF08349 Protein of unknown function (DUF1722) AB285_22015 PF00576 HIUase/Transthyretin family AB285_22020 PF13411 MerR HTH family regulatory protein AB285_22025 PF08212 Lipocalin-like domain AB285_22030 PF00419 Fimbrial protein AB285_22030 PF09222 Fimbrial adhesin F17-AG, lectin domain AB285_22040 PF00577 Outer membrane usher protein AB285_22040 PF13954 PapC N-terminal domain AB285_22040 PF13953 PapC C-terminal domain AB285_22045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB285_22045 PF02753 Pili assembly chaperone PapD, C-terminal domain AB285_22050 PF00419 Fimbrial protein AB285_22070 PF01965 DJ-1/PfpI family AB285_22070 PF12833 Helix-turn-helix domain AB285_22075 PF03352 Methyladenine glycosylase AB285_22075 PF13302 Acetyltransferase (GNAT) domain AB285_22075 PF13673 Acetyltransferase (GNAT) domain AB285_22075 PF00958 GMP synthase C terminal domain AB285_22075 PF00117 Glutamine amidotransferase class-I AB285_22110 PF06755 CbtA_toxin of type IV toxin-antitoxin system AB285_22115 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AB285_22120 PF06174 Protein of unknown function (DUF987) AB285_22125 PF04002 RadC-like JAB domain AB285_22130 PF06067 Domain of unknown function (DUF932) AB285_22160 PF00916 Sulfate permease family AB285_22160 PF01740 STAS domain AB285_22165 PF00582 Universal stress protein family AB285_22180 PF03358 NADPH-dependent FMN reductase AB285_22190 PF06953 Arsenical resistance operon trans-acting repressor ArsD AB285_22195 PF02374 Anion-transporting ATPase AB285_22205 PF03960 ArsC family AB285_22210 PF02040 Arsenical pump membrane protein AB285_22215 PF02374 Anion-transporting ATPase AB285_22220 PF06953 Arsenical resistance operon trans-acting repressor ArsD AB285_22225 PF01022 Bacterial regulatory protein, arsR family AB285_22230 PF00665 Integrase core domain AB285_22230 PF13333 Integrase core domain AB285_22230 PF13276 HTH-like domain AB285_22235 PF01527 Transposase AB285_22250 PF13356 Arm DNA-binding domain AB285_22250 PF00589 Phage integrase family AB285_22250 PF14659 Phage integrase, N-terminal SAM-like domain AB285_22265 PF13802 Galactose mutarotase-like AB285_22265 PF01055 Glycosyl hydrolases family 31 AB285_22270 PF05170 AsmA family AB285_22275 PF00860 Permease family AB285_22280 PF03616 Sodium/glutamate symporter AB285_22285 PF17191 RecG wedge domain AB285_22285 PF00271 Helicase conserved C-terminal domain AB285_22285 PF00270 DEAD/DEAH box helicase AB285_22290 PF12105 SpoU, rRNA methylase, C-terminal AB285_22290 PF00588 SpoU rRNA Methylase family AB285_22295 PF13291 ACT domain AB285_22295 PF02824 TGS domain AB285_22295 PF04607 Region found in RelA / SpoT proteins AB285_22300 PF01192 RNA polymerase Rpb6 AB285_22305 PF00625 Guanylate kinase AB285_22310 PF01653 NAD-dependent DNA ligase adenylation domain AB285_22310 PF03120 NAD-dependent DNA ligase OB-fold domain AB285_22320 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AB285_22325 PF06251 Capsule biosynthesis GfcC AB285_22330 PF06082 Exopolysaccharide biosynthesis protein YbjH AB285_22340 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB285_22345 PF02706 Chain length determinant protein AB285_22345 PF13614 AAA domain AB285_22345 PF13807 G-rich domain on putative tyrosine kinase AB285_22350 PF03458 UPF0126 domain AB285_22355 PF03755 YicC-like family, N-terminal region AB285_22355 PF08340 Domain of unknown function (DUF1732) AB285_22360 PF01138 3' exoribonuclease family, domain 1 AB285_22360 PF03725 3' exoribonuclease family, domain 2 AB285_22365 PF00156 Phosphoribosyl transferase domain AB285_22370 PF00440 Bacterial regulatory proteins, tetR family AB285_22375 PF00692 dUTPase AB285_22380 PF04127 DNA / pantothenate metabolism flavoprotein AB285_22380 PF02441 Flavoprotein AB285_22385 PF04002 RadC-like JAB domain AB285_22390 PF00830 Ribosomal L28 family AB285_22395 PF00471 Ribosomal protein L33 AB285_22400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AB285_22400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AB285_22400 PF06827 Zinc finger found in FPG and IleRS AB285_22405 PF01467 Cytidylyltransferase-like AB285_22410 PF00535 Glycosyl transferase family 2 AB285_22415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AB285_22420 PF00535 Glycosyl transferase family 2 AB285_22425 PF00534 Glycosyl transferases group 1 AB285_22425 PF13439 Glycosyltransferase Family 4 AB285_22430 PF00534 Glycosyl transferases group 1 AB285_22430 PF13439 Glycosyltransferase Family 4 AB285_22435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AB285_22445 PF00535 Glycosyl transferase family 2 AB285_22455 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AB285_22460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AB285_22465 PF01370 NAD dependent epimerase/dehydratase family AB285_22470 PF00155 Aminotransferase class I and II AB285_22475 PF08240 Alcohol dehydrogenase GroES-like domain AB285_22475 PF00107 Zinc-binding dehydrogenase AB285_22485 PF00534 Glycosyl transferases group 1 AB285_22490 PF00535 Glycosyl transferase family 2 AB285_22495 PF04748 Divergent polysaccharide deacetylase AB285_22500 PF01551 Peptidase family M23 AB285_22505 PF01676 Metalloenzyme superfamily AB285_22505 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AB285_22510 PF00581 Rhodanese-like domain AB285_22515 PF00462 Glutaredoxin AB285_22520 PF02556 Preprotein translocase subunit SecB AB285_22525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AB285_22525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AB285_22530 PF00132 Bacterial transferase hexapeptide (six repeats) AB285_22530 PF06426 Serine acetyltransferase, N-terminal AB285_22540 PF00580 UvrD/REP helicase N-terminal domain AB285_22540 PF13361 UvrD-like helicase C-terminal domain AB285_22545 PF02541 Ppx/GppA phosphatase family AB285_22550 PF00270 DEAD/DEAH box helicase AB285_22550 PF00271 Helicase conserved C-terminal domain AB285_22555 PF00085 Thioredoxin AB285_22560 PF07498 Rho termination factor, N-terminal domain AB285_22560 PF07497 Rho termination factor, RNA-binding domain AB285_22560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB285_22565 PF00953 Glycosyl transferase family 4 AB285_22570 PF02706 Chain length determinant protein AB285_22575 PF02350 UDP-N-acetylglucosamine 2-epimerase AB285_22580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB285_22580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB285_22580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB285_22590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AB285_22595 PF01943 Polysaccharide biosynthesis protein AB285_22600 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AB285_22605 PF06899 WzyE protein, O-antigen assembly polymerase AB285_22610 PF03808 Glycosyl transferase WecB/TagA/CpsF family AB285_22615 PF00324 Amino acid permease AB285_22640 PF07719 Tetratricopeptide repeat AB285_22640 PF07219 HemY protein N-terminus AB285_22645 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AB285_22650 PF02602 Uroporphyrinogen-III synthase HemD AB285_22655 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AB285_22655 PF03900 Porphobilinogen deaminase, C-terminal domain AB285_22660 PF01295 Adenylate cyclase, class-I AB285_22660 PF12633 Adenylate cyclase NT domain AB285_22665 PF01491 Frataxin-like domain AB285_22670 PF13627 Prokaryotic lipoprotein-attachment site AB285_22675 PF01678 Diaminopimelate epimerase AB285_22680 PF04340 Protein of unknown function, DUF484 AB285_22685 PF02899 Phage integrase, N-terminal SAM-like domain AB285_22685 PF00589 Phage integrase family AB285_22690 PF13419 Haloacid dehalogenase-like hydrolase AB285_22695 PF00580 UvrD/REP helicase N-terminal domain AB285_22695 PF13361 UvrD-like helicase C-terminal domain AB285_22700 PF01544 CorA-like Mg2+ transporter protein AB285_22705 PF00892 EamA-like transporter family AB285_22710 PF03061 Thioesterase superfamily AB285_22715 PF02253 Phospholipase A1 AB285_22720 PF00271 Helicase conserved C-terminal domain AB285_22720 PF16124 RecQ zinc-binding AB285_22720 PF00270 DEAD/DEAH box helicase AB285_22720 PF00570 HRDC domain AB285_22720 PF09382 RQC domain AB285_22725 PF01810 LysE type translocator AB285_22730 PF01810 LysE type translocator AB285_22735 PF12146 Serine aminopeptidase, S33 AB285_22745 PF00892 EamA-like transporter family AB285_22750 PF03466 LysR substrate binding domain AB285_22750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_22755 PF01717 Cobalamin-independent synthase, Catalytic domain AB285_22755 PF08267 Cobalamin-independent synthase, N-terminal domain AB285_22760 PF01738 Dienelactone hydrolase family AB285_22765 PF01048 Phosphorylase superfamily AB285_22770 PF02646 RmuC family AB285_22775 PF01209 ubiE/COQ5 methyltransferase family AB285_22780 PF02036 SCP-2 sterol transfer family AB285_22785 PF03109 ABC1 family AB285_22790 PF02416 mttA/Hcf106 family AB285_22800 PF00902 Sec-independent protein translocase protein (TatC) AB285_22805 PF01026 TatD related DNase AB285_22810 PF02357 Transcription termination factor nusG AB285_22815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AB285_22820 PF00175 Oxidoreductase NAD-binding domain AB285_22820 PF00970 Oxidoreductase FAD-binding domain AB285_22825 PF00005 ABC transporter AB285_22825 PF12848 ABC transporter AB285_22830 PF01381 Helix-turn-helix AB285_22840 PF11254 Protein of unknown function (DUF3053) AB285_22845 PF00313 'Cold-shock' DNA-binding domain AB285_22850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB285_22850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB285_22855 PF07690 Major Facilitator Superfamily AB285_22860 PF00294 pfkB family carbohydrate kinase AB285_22870 PF00356 Bacterial regulatory proteins, lacI family AB285_22875 PF00691 OmpA family AB285_22875 PF13488 Glycine zipper AB285_22880 PF01568 Molydopterin dinucleotide binding domain AB285_22880 PF18364 Molybdopterin oxidoreductase N-terminal domain AB285_22880 PF00384 Molybdopterin oxidoreductase AB285_22885 PF00583 Acetyltransferase (GNAT) family AB285_22890 PF03352 Methyladenine glycosylase AB285_22900 PF07690 Major Facilitator Superfamily AB285_22905 PF00884 Sulfatase AB285_22905 PF08019 Phosphoethanolamine transferase EptA/EptB AB285_22915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB285_22920 PF00528 Binding-protein-dependent transport system inner membrane component AB285_22925 PF12911 N-terminal TM domain of oligopeptide transport permease C AB285_22925 PF00528 Binding-protein-dependent transport system inner membrane component AB285_22930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_22930 PF00005 ABC transporter AB285_22935 PF00005 ABC transporter AB285_22935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB285_22940 PF00485 Phosphoribulokinase / Uridine kinase family AB285_22965 PF03144 Elongation factor Tu domain 2 AB285_22965 PF03143 Elongation factor Tu C-terminal domain AB285_22965 PF00009 Elongation factor Tu GTP binding domain AB285_22970 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AB285_22975 PF00467 KOW motif AB285_22975 PF02357 Transcription termination factor nusG AB285_22980 PF00298 Ribosomal protein L11, RNA binding domain AB285_22980 PF03946 Ribosomal protein L11, N-terminal domain AB285_22985 PF00687 Ribosomal protein L1p/L10e family AB285_22990 PF00466 Ribosomal protein L10 AB285_22995 PF16320 Ribosomal protein L7/L12 dimerisation domain AB285_22995 PF00542 Ribosomal protein L7/L12 C-terminal domain AB285_23000 PF04561 RNA polymerase Rpb2, domain 2 AB285_23000 PF04565 RNA polymerase Rpb2, domain 3 AB285_23000 PF10385 RNA polymerase beta subunit external 1 domain AB285_23000 PF00562 RNA polymerase Rpb2, domain 6 AB285_23000 PF04560 RNA polymerase Rpb2, domain 7 AB285_23000 PF04563 RNA polymerase beta subunit AB285_23005 PF04997 RNA polymerase Rpb1, domain 1 AB285_23005 PF05000 RNA polymerase Rpb1, domain 4 AB285_23005 PF04998 RNA polymerase Rpb1, domain 5 AB285_23005 PF00623 RNA polymerase Rpb1, domain 2 AB285_23005 PF04983 RNA polymerase Rpb1, domain 3 AB285_23010 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AB285_23015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB285_23020 PF00990 Diguanylate cyclase, GGDEF domain AB285_23025 PF06968 Biotin and Thiamin Synthesis associated domain AB285_23025 PF04055 Radical SAM superfamily AB285_23030 PF05690 Thiazole biosynthesis protein ThiG AB285_23035 PF02597 ThiS family AB285_23040 PF00899 ThiF family AB285_23045 PF02581 Thiamine monophosphate synthase AB285_23050 PF01964 Radical SAM ThiC family AB285_23050 PF13667 ThiC-associated domain AB285_23055 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AB285_23060 PF00293 NUDIX domain AB285_23060 PF09297 NADH pyrophosphatase zinc ribbon domain AB285_23065 PF01208 Uroporphyrinogen decarboxylase (URO-D) AB285_23070 PF04493 Endonuclease V AB285_23075 PF04222 Protein of unknown function (DUF416) AB285_23080 PF00216 Bacterial DNA-binding protein AB285_23085 PF07356 Protein of unknown function (DUF1481) AB285_23090 PF02843 Phosphoribosylglycinamide synthetase, C domain AB285_23090 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AB285_23090 PF02844 Phosphoribosylglycinamide synthetase, N domain AB285_23095 PF01808 AICARFT/IMPCHase bienzyme AB285_23095 PF02142 MGS-like domain AB285_23115 PF04204 Homoserine O-succinyltransferase AB285_23120 PF01274 Malate synthase AB285_23125 PF00463 Isocitrate lyase family AB285_23130 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AB285_23135 PF09339 IclR helix-turn-helix domain AB285_23135 PF01614 Bacterial transcriptional regulator AB285_23140 PF02965 Vitamin B12 dependent methionine synthase, activation domain AB285_23140 PF02574 Homocysteine S-methyltransferase AB285_23140 PF00809 Pterin binding enzyme AB285_23140 PF02607 B12 binding domain AB285_23140 PF02310 B12 binding domain AB285_23145 PF02690 Na+/Pi-cotransporter AB285_23160 PF00849 RNA pseudouridylate synthase AB285_23160 PF01479 S4 domain AB285_23165 PF11656 YjbD family (DUF3811) AB285_23170 PF01758 Sodium Bile acid symporter family AB285_23175 PF01842 ACT domain AB285_23175 PF00696 Amino acid kinase family AB285_23180 PF00342 Phosphoglucose isomerase AB285_23185 PF11106 Exopolysaccharide production protein YjbE AB285_23190 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AB285_23195 PF06251 Capsule biosynthesis GfcC AB285_23200 PF06082 Exopolysaccharide biosynthesis protein YbjH AB285_23205 PF06146 Phosphate-starvation-inducible E AB285_23210 PF00528 Binding-protein-dependent transport system inner membrane component AB285_23215 PF14785 Maltose transport system permease protein MalF P2 domain AB285_23215 PF00528 Binding-protein-dependent transport system inner membrane component AB285_23220 PF01547 Bacterial extracellular solute-binding protein AB285_23225 PF17912 MalK OB fold domain AB285_23225 PF00005 ABC transporter AB285_23230 PF02264 LamB porin AB285_23235 PF07148 Maltose operon periplasmic protein precursor (MalM) AB285_23250 PF04345 Chorismate lyase AB285_23255 PF01040 UbiA prenyltransferase family AB285_23260 PF01553 Acyltransferase AB285_23265 PF01219 Prokaryotic diacylglycerol kinase AB285_23270 PF00717 Peptidase S24-like AB285_23270 PF01726 LexA DNA binding domain AB285_23275 PF01554 MatE AB285_23280 PF05532 CsbD-like AB285_23285 PF01475 Ferric uptake regulator family AB285_23325 PF01555 DNA methylase AB285_23325 PF18755 Restriction Enzyme Adenine Methylase Associated AB285_23345 PF10065 Uncharacterized conserved protein (DUF2303) AB285_23360 PF00717 Peptidase S24-like AB285_23365 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AB285_23385 PF03354 Phage Terminase AB285_23390 PF05869 DNA N-6-adenine-methyltransferase (Dam) AB285_23400 PF06147 Protein of unknown function (DUF968) AB285_23435 PF00959 Phage lysozyme AB285_23475 PF00574 Clp protease AB285_23515 PF06791 Prophage tail length tape measure protein AB285_23560 PF02796 Helix-turn-helix domain of resolvase AB285_23560 PF00239 Resolvase, N terminal domain AB285_23570 PF06183 DinI-like family AB285_23580 PF01207 Dihydrouridine synthase (Dus) AB285_23585 PF09583 Phage shock protein G (Phageshock_PspG) AB285_23590 PF08240 Alcohol dehydrogenase GroES-like domain AB285_23590 PF00107 Zinc-binding dehydrogenase AB285_23595 PF03796 DnaB-like helicase C terminal domain AB285_23595 PF00772 DnaB-like helicase N terminal domain AB285_23600 PF00842 Alanine racemase, C-terminal domain AB285_23600 PF01168 Alanine racemase, N-terminal domain AB285_23605 PF00155 Aminotransferase class I and II AB285_23610 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AB285_23615 PF01894 Uncharacterised protein family UPF0047 AB285_23620 PF04237 YjbR AB285_23625 PF00005 ABC transporter AB285_23625 PF17755 UvrA DNA-binding domain AB285_23625 PF17760 UvrA interaction domain AB285_23630 PF00436 Single-strand binding protein family AB285_23635 PF15940 Family of unknown function AB285_23640 PF17151 Periplasmic sensor domain AB285_23640 PF00990 Diguanylate cyclase, GGDEF domain AB285_23645 PF12792 CSS motif domain associated with EAL AB285_23645 PF00563 EAL domain AB285_23650 PF12833 Helix-turn-helix domain AB285_23655 PF00376 MerR family regulatory protein AB285_23655 PF09278 MerR, DNA binding AB285_23660 PF00043 Glutathione S-transferase, C-terminal domain AB285_23660 PF02798 Glutathione S-transferase, N-terminal domain AB285_23665 PF00860 Permease family AB285_23670 PF00999 Sodium/hydrogen exchanger family AB285_23675 PF03466 LysR substrate binding domain AB285_23675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB285_23680 PF03788 LrgA family AB285_23685 PF04172 LrgB-like family AB285_23690 PF00474 Sodium:solute symporter family AB285_23695 PF04341 Protein of unknown function, DUF485 AB285_23700 PF16177 Acetyl-coenzyme A synthetase N-terminus AB285_23700 PF00501 AMP-binding enzyme AB285_23700 PF13193 AMP-binding enzyme C-terminal domain AB285_23705 PF00375 Sodium:dicarboxylate symporter family AB285_23710 PF08238 Sel1 repeat AB285_23715 PF01848 Hok/gef family AB285_23720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_23720 PF00384 Molybdopterin oxidoreductase AB285_23720 PF01568 Molydopterin dinucleotide binding domain AB285_23725 PF00384 Molybdopterin oxidoreductase AB285_23725 PF01568 Molydopterin dinucleotide binding domain AB285_23725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB285_23730 PF00486 Transcriptional regulatory protein, C terminal AB285_23730 PF00072 Response regulator receiver domain AB285_23740 PF01116 Fructose-bisphosphate aldolase class-II AB285_23750 PF13407 Periplasmic binding protein domain AB285_23755 PF02653 Branched-chain amino acid transport system / permease component AB285_23760 PF00005 ABC transporter AB285_23765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB285_23765 PF13426 PAS domain AB285_23765 PF00072 Response regulator receiver domain AB285_23770 PF00480 ROK family AB285_23775 PF00834 Ribulose-phosphate 3 epimerase family AB285_23780 PF02653 Branched-chain amino acid transport system / permease component AB285_23785 PF00005 ABC transporter AB285_23790 PF13407 Periplasmic binding protein domain AB285_23795 PF01418 Helix-turn-helix domain, rpiR family AB285_23795 PF01380 SIS domain AB285_23800 PF02502 Ribose/Galactose Isomerase AB285_23810 PF12706 Beta-lactamase superfamily domain AB285_23815 PF00583 Acetyltransferase (GNAT) family AB285_23825 PF07969 Amidohydrolase family AB285_23830 PF00005 ABC transporter AB285_23835 PF00005 ABC transporter AB285_23840 PF06007 Phosphonate metabolism protein PhnJ AB285_23845 PF05861 Bacterial phosphonate metabolism protein (PhnI) AB285_23850 PF05845 Bacterial phosphonate metabolism protein (PhnH)