locus-tag class description JCP76_00005 PF08299 Bacterial dnaA protein helix-turn-helix JCP76_00005 PF00308 Bacterial dnaA protein JCP76_00010 PF02767 DNA polymerase III beta subunit, central domain JCP76_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JCP76_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JCP76_00020 PF02463 RecF/RecN/SMC N terminal domain JCP76_00025 PF00204 DNA gyrase B JCP76_00025 PF01751 Toprim domain JCP76_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_00025 PF00986 DNA gyrase B subunit, carboxyl terminus JCP76_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JCP76_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JCP76_00035 PF01250 Ribosomal protein S6 JCP76_00040 PF00436 Single-strand binding protein family JCP76_00045 PF01084 Ribosomal protein S18 JCP76_00050 PF02272 DHHA1 domain JCP76_00050 PF01368 DHH family JCP76_00055 PF01281 Ribosomal protein L9, N-terminal domain JCP76_00055 PF03948 Ribosomal protein L9, C-terminal domain JCP76_00060 PF00772 DnaB-like helicase N terminal domain JCP76_00060 PF03796 DnaB-like helicase C terminal domain JCP76_00065 PF00709 Adenylosuccinate synthetase JCP76_00070 PF02645 Uncharacterised protein, DegV family COG1307 JCP76_00075 PF12848 ABC transporter JCP76_00075 PF00005 ABC transporter JCP76_00085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCP76_00085 PF00205 Thiamine pyrophosphate enzyme, central domain JCP76_00085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCP76_00090 PF02535 ZIP Zinc transporter JCP76_00100 PF06736 Protein of unknown function (DUF1211) JCP76_00110 PF04892 VanZ like family JCP76_00130 PF00872 Transposase, Mutator family JCP76_00155 PF00455 DeoR C terminal sensor domain JCP76_00155 PF08220 DeoR-like helix-turn-helix domain JCP76_00160 PF00232 Glycosyl hydrolase family 1 JCP76_00165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP76_00170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_00170 PF02378 Phosphotransferase system, EIIC JCP76_00175 PF07745 Glycosyl hydrolase family 53 JCP76_00180 PF00872 Transposase, Mutator family JCP76_00185 PF02463 RecF/RecN/SMC N terminal domain JCP76_00190 PF00580 UvrD/REP helicase N-terminal domain JCP76_00190 PF13361 UvrD-like helicase C-terminal domain JCP76_00215 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP76_00215 PF02486 Replication initiation factor JCP76_00260 PF00877 NlpC/P60 family JCP76_00275 PF00009 Elongation factor Tu GTP binding domain JCP76_00275 PF03764 Elongation factor G, domain IV JCP76_00275 PF14492 Elongation Factor G, domain II JCP76_00275 PF00679 Elongation factor G C-terminus JCP76_00305 PF14659 Phage integrase, N-terminal SAM-like domain JCP76_00305 PF00589 Phage integrase family JCP76_00310 PF00117 Glutamine amidotransferase class-I JCP76_00310 PF00958 GMP synthase C terminal domain JCP76_00310 PF02540 NAD synthase JCP76_00315 PF00485 Phosphoribulokinase / Uridine kinase family JCP76_00320 PF05175 Methyltransferase small domain JCP76_00325 PF00356 Bacterial regulatory proteins, lacI family JCP76_00330 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JCP76_00330 PF00591 Glycosyl transferase family, a/b domain JCP76_00330 PF02885 Glycosyl transferase family, helical bundle domain JCP76_00335 PF01791 DeoC/LacD family aldolase JCP76_00340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCP76_00345 PF02608 ABC transporter substrate-binding protein PnrA-like JCP76_00350 PF00005 ABC transporter JCP76_00355 PF02653 Branched-chain amino acid transport system / permease component JCP76_00360 PF02653 Branched-chain amino acid transport system / permease component JCP76_00365 PF01676 Metalloenzyme superfamily JCP76_00370 PF01048 Phosphorylase superfamily JCP76_00375 PF01048 Phosphorylase superfamily JCP76_00380 PF00300 Histidine phosphatase superfamily (branch 1) JCP76_00385 PF00239 Resolvase, N terminal domain JCP76_00385 PF02796 Helix-turn-helix domain of resolvase JCP76_00390 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCP76_00395 PF00164 Ribosomal protein S12/S23 JCP76_00400 PF00177 Ribosomal protein S7p/S5e JCP76_00405 PF03764 Elongation factor G, domain IV JCP76_00405 PF14492 Elongation Factor G, domain II JCP76_00405 PF00009 Elongation factor Tu GTP binding domain JCP76_00405 PF00679 Elongation factor G C-terminus JCP76_00405 PF03144 Elongation factor Tu domain 2 JCP76_00410 PF00009 Elongation factor Tu GTP binding domain JCP76_00410 PF03144 Elongation factor Tu domain 2 JCP76_00410 PF03143 Elongation factor Tu C-terminal domain JCP76_00415 PF00338 Ribosomal protein S10p/S20e JCP76_00420 PF00297 Ribosomal protein L3 JCP76_00425 PF00573 Ribosomal protein L4/L1 family JCP76_00430 PF00276 Ribosomal protein L23 JCP76_00435 PF03947 Ribosomal Proteins L2, C-terminal domain JCP76_00435 PF00181 Ribosomal Proteins L2, RNA binding domain JCP76_00440 PF00203 Ribosomal protein S19 JCP76_00445 PF00237 Ribosomal protein L22p/L17e JCP76_00450 PF00189 Ribosomal protein S3, C-terminal domain JCP76_00450 PF07650 KH domain JCP76_00455 PF00252 Ribosomal protein L16p/L10e JCP76_00460 PF00831 Ribosomal L29 protein JCP76_00465 PF00366 Ribosomal protein S17 JCP76_00470 PF00238 Ribosomal protein L14p/L23e JCP76_00475 PF00467 KOW motif JCP76_00475 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCP76_00480 PF00673 ribosomal L5P family C-terminus JCP76_00480 PF00281 Ribosomal protein L5 JCP76_00485 PF00253 Ribosomal protein S14p/S29e JCP76_00490 PF00410 Ribosomal protein S8 JCP76_00495 PF00347 Ribosomal protein L6 JCP76_00500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCP76_00505 PF00333 Ribosomal protein S5, N-terminal domain JCP76_00505 PF03719 Ribosomal protein S5, C-terminal domain JCP76_00510 PF00327 Ribosomal protein L30p/L7e JCP76_00515 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCP76_00520 PF00344 SecY translocase JCP76_00525 PF05191 Adenylate kinase, active site lid JCP76_00530 PF01176 Translation initiation factor 1A / IF-1 JCP76_00535 PF00444 Ribosomal protein L36 JCP76_00540 PF00416 Ribosomal protein S13/S18 JCP76_00545 PF00411 Ribosomal protein S11 JCP76_00550 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCP76_00550 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCP76_00550 PF01000 RNA polymerase Rpb3/RpoA insert domain JCP76_00555 PF01196 Ribosomal protein L17 JCP76_00560 PF00005 ABC transporter JCP76_00565 PF00005 ABC transporter JCP76_00570 PF02361 Cobalt transport protein JCP76_00575 PF01416 tRNA pseudouridine synthase JCP76_00585 PF00830 Ribosomal L28 family JCP76_00590 PF03780 Asp23 family, cell envelope-related function JCP76_00595 PF13684 Dihydroxyacetone kinase family JCP76_00595 PF02734 DAK2 domain JCP76_00600 PF00270 DEAD/DEAH box helicase JCP76_00600 PF17191 RecG wedge domain JCP76_00600 PF00271 Helicase conserved C-terminal domain JCP76_00605 PF02504 Fatty acid synthesis protein JCP76_00610 PF00550 Phosphopantetheine attachment site JCP76_00615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP76_00615 PF00005 ABC transporter JCP76_00620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP76_00620 PF00005 ABC transporter JCP76_00625 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_00630 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_00635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCP76_00640 PF14622 Ribonuclease-III-like JCP76_00640 PF00035 Double-stranded RNA binding motif JCP76_00645 PF06470 SMC proteins Flexible Hinge Domain JCP76_00645 PF02463 RecF/RecN/SMC N terminal domain JCP76_00655 PF02881 SRP54-type protein, helical bundle domain JCP76_00655 PF00448 SRP54-type protein, GTPase domain JCP76_00660 PF02655 ATP-grasp domain JCP76_00660 PF04262 Glutamate-cysteine ligase JCP76_00660 PF18419 ATP-grasp-like domain JCP76_00670 PF01032 FecCD transport family JCP76_00675 PF01032 FecCD transport family JCP76_00680 PF00005 ABC transporter JCP76_00685 PF01497 Periplasmic binding protein JCP76_00710 PF06458 MucBP domain JCP76_00725 PF00872 Transposase, Mutator family JCP76_00740 PF00230 Major intrinsic protein JCP76_00745 PF03788 LrgA family JCP76_00750 PF04172 LrgB-like family JCP76_00760 PF04172 LrgB-like family JCP76_00785 PF02632 BioY family JCP76_00790 PF01479 S4 domain JCP76_00790 PF00163 Ribosomal protein S4/S9 N-terminal domain JCP76_00810 PF13277 YmdB-like protein JCP76_00820 PF00488 MutS domain V JCP76_00820 PF05190 MutS family domain IV JCP76_00820 PF05192 MutS domain III JCP76_00820 PF05188 MutS domain II JCP76_00820 PF01624 MutS domain I JCP76_00825 PF08676 MutL C terminal dimerisation domain JCP76_00825 PF01119 DNA mismatch repair protein, C-terminal domain JCP76_00830 PF02545 Maf-like protein JCP76_00835 PF02378 Phosphotransferase system, EIIC JCP76_00835 PF00367 phosphotransferase system, EIIB JCP76_00840 PF00392 Bacterial regulatory proteins, gntR family JCP76_00840 PF07702 UTRA domain JCP76_00845 PF01641 SelR domain JCP76_00850 PF07499 RuvA, C-terminal domain JCP76_00850 PF01330 RuvA N terminal domain JCP76_00855 PF17864 RuvB AAA lid domain JCP76_00855 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCP76_00855 PF05491 RuvB C-terminal winged helix domain JCP76_00865 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCP76_00875 PF00872 Transposase, Mutator family JCP76_00880 PF05525 Branched-chain amino acid transport protein JCP76_00885 PF06736 Protein of unknown function (DUF1211) JCP76_00890 PF00324 Amino acid permease JCP76_00895 PF00005 ABC transporter JCP76_00900 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_00910 PF02146 Sir2 family JCP76_00915 PF14602 Hexapeptide repeat of succinyl-transferase JCP76_00915 PF12464 Maltose acetyltransferase JCP76_00920 PF08279 HTH domain JCP76_00920 PF02829 3H domain JCP76_00925 PF01327 Polypeptide deformylase JCP76_00930 PF00312 Ribosomal protein S15 JCP76_00935 PF00013 KH domain JCP76_00935 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCP76_00935 PF01138 3' exoribonuclease family, domain 1 JCP76_00935 PF03725 3' exoribonuclease family, domain 2 JCP76_00935 PF00575 S1 RNA binding domain JCP76_00945 PF02705 K+ potassium transporter JCP76_00950 PF00571 CBS domain JCP76_00950 PF03471 Transporter associated domain JCP76_00950 PF01595 Cyclin M transmembrane N-terminal domain JCP76_00955 PF01554 MatE JCP76_00965 PF01386 Ribosomal L25p family JCP76_00965 PF14693 Ribosomal protein TL5, C-terminal domain JCP76_00970 PF01479 S4 domain JCP76_00970 PF00849 RNA pseudouridylate synthase JCP76_00975 PF13419 Haloacid dehalogenase-like hydrolase JCP76_00980 PF00485 Phosphoribulokinase / Uridine kinase family JCP76_01005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCP76_01010 PF03109 ABC1 family JCP76_01015 PF01820 D-ala D-ala ligase N-terminus JCP76_01015 PF07478 D-ala D-ala ligase C-terminus JCP76_01020 PF01225 Mur ligase family, catalytic domain JCP76_01020 PF02875 Mur ligase family, glutamate ligase domain JCP76_01020 PF08245 Mur ligase middle domain JCP76_01025 PF00270 DEAD/DEAH box helicase JCP76_01025 PF00271 Helicase conserved C-terminal domain JCP76_01030 PF01648 4'-phosphopantetheinyl transferase superfamily JCP76_01035 PF01168 Alanine racemase, N-terminal domain JCP76_01035 PF00842 Alanine racemase, C-terminal domain JCP76_01040 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JCP76_01045 PF00253 Ribosomal protein S14p/S29e JCP76_01050 PF02801 Beta-ketoacyl synthase, C-terminal domain JCP76_01050 PF00550 Phosphopantetheine attachment site JCP76_01050 PF08659 KR domain JCP76_01050 PF14765 Polyketide synthase dehydratase JCP76_01050 PF00109 Beta-ketoacyl synthase, N-terminal domain JCP76_01050 PF00698 Acyl transferase domain JCP76_01050 PF08240 Alcohol dehydrogenase GroES-like domain JCP76_01050 PF16197 Ketoacyl-synthetase C-terminal extension JCP76_01055 PF01061 ABC-2 type transporter JCP76_01060 PF13520 Amino acid permease JCP76_01085 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_01090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCP76_01095 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_01100 PF00571 CBS domain JCP76_01100 PF00005 ABC transporter JCP76_01105 PF02547 Queuosine biosynthesis protein JCP76_01110 PF00690 Cation transporter/ATPase, N-terminus JCP76_01110 PF00689 Cation transporting ATPase, C-terminus JCP76_01120 PF01702 Queuine tRNA-ribosyltransferase JCP76_01125 PF02699 Preprotein translocase subunit JCP76_01130 PF00171 Aldehyde dehydrogenase family JCP76_01130 PF00465 Iron-containing alcohol dehydrogenase JCP76_01140 PF07470 Glycosyl Hydrolase Family 88 JCP76_01145 PF03480 Bacterial extracellular solute-binding protein, family 7 JCP76_01155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JCP76_01170 PF02311 AraC-like ligand binding domain JCP76_01170 PF12833 Helix-turn-helix domain JCP76_01175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP76_01175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP76_01180 PF06134 L-rhamnose isomerase (RhaA) JCP76_01185 PF00596 Class II Aldolase and Adducin N-terminal domain JCP76_01190 PF05336 L-rhamnose mutarotase JCP76_01195 PF00465 Iron-containing alcohol dehydrogenase JCP76_01200 PF01614 Bacterial transcriptional regulator JCP76_01200 PF09339 IclR helix-turn-helix domain JCP76_01205 PF01081 KDPG and KHG aldolase JCP76_01215 PF04962 KduI/IolB family JCP76_01225 PF01070 FMN-dependent dehydrogenase JCP76_01230 PF08544 GHMP kinases C terminal JCP76_01230 PF00288 GHMP kinases N terminal domain JCP76_01240 PF10509 Galactokinase galactose-binding signature JCP76_01240 PF00288 GHMP kinases N terminal domain JCP76_01240 PF08544 GHMP kinases C terminal JCP76_01245 PF01712 Deoxynucleoside kinase JCP76_01260 PF00872 Transposase, Mutator family JCP76_01265 PF05198 Translation initiation factor IF-3, N-terminal domain JCP76_01265 PF00707 Translation initiation factor IF-3, C-terminal domain JCP76_01270 PF01632 Ribosomal protein L35 JCP76_01275 PF00453 Ribosomal protein L20 JCP76_01285 PF05378 Hydantoinase/oxoprolinase N-terminal region JCP76_01285 PF01968 Hydantoinase/oxoprolinase JCP76_01305 PF03061 Thioesterase superfamily JCP76_01310 PF01256 Carbohydrate kinase JCP76_01315 PF01546 Peptidase family M20/M25/M40 JCP76_01320 PF00535 Glycosyl transferase family 2 JCP76_01330 PF05343 M42 glutamyl aminopeptidase JCP76_01335 PF00085 Thioredoxin JCP76_01340 PF00582 Universal stress protein family JCP76_01345 PF14794 Domain of unknown function (DUF4479) JCP76_01345 PF01588 Putative tRNA binding domain JCP76_01350 PF13180 PDZ domain JCP76_01355 PF02590 Predicted SPOUT methyltransferase JCP76_01360 PF07308 Protein of unknown function (DUF1456) JCP76_01370 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCP76_01370 PF02558 Ketopantoate reductase PanE/ApbA JCP76_01385 PF01625 Peptide methionine sulfoxide reductase JCP76_01395 PF13673 Acetyltransferase (GNAT) domain JCP76_01420 PF00872 Transposase, Mutator family JCP76_01450 PF00884 Sulfatase JCP76_01460 PF00375 Sodium:dicarboxylate symporter family JCP76_01470 PF01416 tRNA pseudouridine synthase JCP76_01485 PF00872 Transposase, Mutator family JCP76_01500 PF01625 Peptide methionine sulfoxide reductase JCP76_01505 PF00248 Aldo/keto reductase family JCP76_01510 PF00392 Bacterial regulatory proteins, gntR family JCP76_01510 PF07729 FCD domain JCP76_01515 PF02378 Phosphotransferase system, EIIC JCP76_01520 PF00232 Glycosyl hydrolase family 1 JCP76_01525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_01530 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP76_01550 PF00107 Zinc-binding dehydrogenase JCP76_01550 PF13823 Alcohol dehydrogenase GroES-associated JCP76_01550 PF08240 Alcohol dehydrogenase GroES-like domain JCP76_01560 PF06100 MCRA family JCP76_01590 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCP76_01600 PF00324 Amino acid permease JCP76_01605 PF00690 Cation transporter/ATPase, N-terminus JCP76_01605 PF00689 Cation transporting ATPase, C-terminus JCP76_01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP76_01620 PF03466 LysR substrate binding domain JCP76_01625 PF00698 Acyl transferase domain JCP76_01630 PF16957 Malonate decarboxylase, alpha subunit, transporter JCP76_01635 PF06857 Malonate decarboxylase delta subunit (MdcD) JCP76_01640 PF01039 Carboxyl transferase domain JCP76_01645 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCP76_01655 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCP76_01665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_01675 PF03611 PTS system sugar-specific permease component JCP76_01685 PF01116 Fructose-bisphosphate aldolase class-II JCP76_01695 PF00293 NUDIX domain JCP76_01700 PF01047 MarR family JCP76_01705 PF13673 Acetyltransferase (GNAT) domain JCP76_01725 PF00860 Permease family JCP76_01730 PF16657 Maltogenic Amylase, C-terminal domain JCP76_01730 PF00128 Alpha amylase, catalytic domain JCP76_01735 PF00232 Glycosyl hydrolase family 1 JCP76_01745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_01745 PF00367 phosphotransferase system, EIIB JCP76_01745 PF02378 Phosphotransferase system, EIIC JCP76_01750 PF00232 Glycosyl hydrolase family 1 JCP76_01760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCP76_01770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_01770 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_01780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP76_01780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP76_01785 PF01266 FAD dependent oxidoreductase JCP76_01785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCP76_01790 PF00230 Major intrinsic protein JCP76_01800 PF01066 CDP-alcohol phosphatidyltransferase JCP76_01810 PF02583 Metal-sensitive transcriptional repressor JCP76_01815 PF00581 Rhodanese-like domain JCP76_01820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_01820 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_01825 PF13538 UvrD-like helicase C-terminal domain JCP76_01835 PF00535 Glycosyl transferase family 2 JCP76_01845 PF01906 Putative heavy-metal-binding JCP76_01850 PF03610 PTS system fructose IIA component JCP76_01855 PF02733 Dak1 domain JCP76_01860 PF02734 DAK2 domain JCP76_01865 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) JCP76_01870 PF13545 Crp-like helix-turn-helix domain JCP76_01870 PF00027 Cyclic nucleotide-binding domain JCP76_01880 PF13732 Domain of unknown function (DUF4162) JCP76_01880 PF00005 ABC transporter JCP76_01885 PF00440 Bacterial regulatory proteins, tetR family JCP76_01885 PF16859 Tetracyclin repressor-like, C-terminal domain JCP76_01895 PF01479 S4 domain JCP76_01895 PF00579 tRNA synthetases class I (W and Y) JCP76_01900 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCP76_01905 PF13520 Amino acid permease JCP76_01915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP76_01915 PF00356 Bacterial regulatory proteins, lacI family JCP76_01925 PF13419 Haloacid dehalogenase-like hydrolase JCP76_01930 PF03636 Glycosyl hydrolase family 65, N-terminal domain JCP76_01930 PF03632 Glycosyl hydrolase family 65 central catalytic domain JCP76_01930 PF03633 Glycosyl hydrolase family 65, C-terminal domain JCP76_01935 PF02378 Phosphotransferase system, EIIC JCP76_01935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_01935 PF00367 phosphotransferase system, EIIB JCP76_01940 PF03372 Endonuclease/Exonuclease/phosphatase family JCP76_01960 PF05870 Phenolic acid decarboxylase (PAD) JCP76_01965 PF03551 Transcriptional regulator PadR-like family JCP76_01965 PF10400 Virulence activator alpha C-term JCP76_01975 PF07690 Major Facilitator Superfamily JCP76_01995 PF02441 Flavoprotein JCP76_02000 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JCP76_02010 PF02687 FtsX-like permease family JCP76_02010 PF12704 MacB-like periplasmic core domain JCP76_02010 PF00005 ABC transporter JCP76_02015 PF00072 Response regulator receiver domain JCP76_02015 PF00486 Transcriptional regulatory protein, C terminal JCP76_02020 PF00072 Response regulator receiver domain JCP76_02020 PF09308 LuxQ, periplasmic JCP76_02020 PF00512 His Kinase A (phospho-acceptor) domain JCP76_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP76_02025 PF03466 LysR substrate binding domain JCP76_02030 PF04474 Protein of unknown function (DUF554) JCP76_02065 PF00005 ABC transporter JCP76_02075 PF01263 Aldose 1-epimerase JCP76_02080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP76_02080 PF05257 CHAP domain JCP76_02085 PF02378 Phosphotransferase system, EIIC JCP76_02085 PF00367 phosphotransferase system, EIIB JCP76_02085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_02090 PF05025 RbsD / FucU transport protein family JCP76_02095 PF00294 pfkB family carbohydrate kinase JCP76_02095 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCP76_02100 PF00356 Bacterial regulatory proteins, lacI family JCP76_02105 PF00857 Isochorismatase family JCP76_02110 PF00005 ABC transporter JCP76_02120 PF00128 Alpha amylase, catalytic domain JCP76_02120 PF16657 Maltogenic Amylase, C-terminal domain JCP76_02125 PF01594 AI-2E family transporter JCP76_02130 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCP76_02130 PF01297 Zinc-uptake complex component A periplasmic JCP76_02135 PF04397 LytTr DNA-binding domain JCP76_02135 PF00072 Response regulator receiver domain JCP76_02145 PF04647 Accessory gene regulator B JCP76_02155 PF01712 Deoxynucleoside kinase JCP76_02165 PF13361 UvrD-like helicase C-terminal domain JCP76_02165 PF00580 UvrD/REP helicase N-terminal domain JCP76_02175 PF03960 ArsC family JCP76_02180 PF03960 ArsC family JCP76_02185 PF13276 HTH-like domain JCP76_02185 PF00665 Integrase core domain JCP76_02185 PF13333 Integrase core domain JCP76_02210 PF00255 Glutathione peroxidase JCP76_02215 PF02664 S-Ribosylhomocysteinase (LuxS) JCP76_02220 PF01053 Cys/Met metabolism PLP-dependent enzyme JCP76_02230 PF00291 Pyridoxal-phosphate dependent enzyme JCP76_02235 PF08207 Elongation factor P (EF-P) KOW-like domain JCP76_02235 PF01132 Elongation factor P (EF-P) OB domain JCP76_02235 PF09285 Elongation factor P, C-terminal JCP76_02245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCP76_02245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCP76_02250 PF01678 Diaminopimelate epimerase JCP76_02255 PF00701 Dihydrodipicolinate synthetase family JCP76_02260 PF01113 Dihydrodipicolinate reductase, N-terminus JCP76_02260 PF05173 Dihydrodipicolinate reductase, C-terminus JCP76_02265 PF14602 Hexapeptide repeat of succinyl-transferase JCP76_02265 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JCP76_02265 PF00132 Bacterial transferase hexapeptide (six repeats) JCP76_02270 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCP76_02270 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCP76_02275 PF00696 Amino acid kinase family JCP76_02275 PF13840 ACT domain JCP76_02280 PF01546 Peptidase family M20/M25/M40 JCP76_02280 PF07687 Peptidase dimerisation domain JCP76_02285 PF00155 Aminotransferase class I and II JCP76_02290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_02290 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_02310 PF11798 IMS family HHH motif JCP76_02310 PF11799 impB/mucB/samB family C-terminal domain JCP76_02310 PF00817 impB/mucB/samB family JCP76_02315 PF00288 GHMP kinases N terminal domain JCP76_02315 PF10509 Galactokinase galactose-binding signature JCP76_02315 PF08544 GHMP kinases C terminal JCP76_02320 PF01263 Aldose 1-epimerase JCP76_02325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_02330 PF12833 Helix-turn-helix domain JCP76_02330 PF02311 AraC-like ligand binding domain JCP76_02335 PF02525 Flavodoxin-like fold JCP76_02350 PF00324 Amino acid permease JCP76_02355 PF00005 ABC transporter JCP76_02360 PF00950 ABC 3 transport family JCP76_02365 PF01297 Zinc-uptake complex component A periplasmic JCP76_02375 PF08331 Domain of unknown function (DUF1730) JCP76_02380 PF01476 LysM domain JCP76_02380 PF04972 BON domain JCP76_02390 PF01266 FAD dependent oxidoreductase JCP76_02395 PF07690 Major Facilitator Superfamily JCP76_02405 PF02863 Arginine repressor, C-terminal domain JCP76_02405 PF01316 Arginine repressor, DNA binding domain JCP76_02410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCP76_02410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCP76_02410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCP76_02410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCP76_02420 PF02566 OsmC-like protein JCP76_02425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_02425 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_02430 PF00857 Isochorismatase family JCP76_02435 PF00440 Bacterial regulatory proteins, tetR family JCP76_02435 PF16925 Tetracyclin repressor-like, C-terminal domain JCP76_02445 PF02586 SOS response associated peptidase (SRAP) JCP76_02480 PF05067 Manganese containing catalase JCP76_02485 PF01547 Bacterial extracellular solute-binding protein JCP76_02490 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_02495 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_02535 PF00486 Transcriptional regulatory protein, C terminal JCP76_02535 PF00072 Response regulator receiver domain JCP76_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_02545 PF06800 Sugar transport protein JCP76_02550 PF13520 Amino acid permease JCP76_02555 PF05816 Toxic anion resistance protein (TelA) JCP76_02565 PF00293 NUDIX domain JCP76_02575 PF01048 Phosphorylase superfamily JCP76_02580 PF00857 Isochorismatase family JCP76_02585 PF13229 Right handed beta helix region JCP76_02590 PF01431 Peptidase family M13 JCP76_02590 PF05649 Peptidase family M13 JCP76_02600 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCP76_02600 PF14572 Phosphoribosyl synthetase-associated domain JCP76_02605 PF00266 Aminotransferase class-V JCP76_02615 PF07690 Major Facilitator Superfamily JCP76_02630 PF13520 Amino acid permease JCP76_02635 PF00155 Aminotransferase class I and II JCP76_02640 PF07690 Major Facilitator Superfamily JCP76_02655 PF01131 DNA topoisomerase JCP76_02655 PF01751 Toprim domain JCP76_02660 PF00535 Glycosyl transferase family 2 JCP76_02665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCP76_02665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCP76_02670 PF03601 Conserved hypothetical protein 698 JCP76_02680 PF03466 LysR substrate binding domain JCP76_02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP76_02685 PF01098 Cell cycle protein JCP76_02690 PF03960 ArsC family JCP76_02695 PF01597 Glycine cleavage H-protein JCP76_02700 PF09383 NIL domain JCP76_02700 PF00005 ABC transporter JCP76_02705 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_02710 PF03180 NLPA lipoprotein JCP76_02715 PF00005 ABC transporter JCP76_02720 PF01458 Uncharacterized protein family (UPF0051) JCP76_02725 PF00266 Aminotransferase class-V JCP76_02730 PF01592 NifU-like N terminal domain JCP76_02735 PF01458 Uncharacterized protein family (UPF0051) JCP76_02740 PF02899 Phage integrase, N-terminal SAM-like domain JCP76_02740 PF00589 Phage integrase family JCP76_02785 PF02384 N-6 DNA Methylase JCP76_02785 PF12161 HsdM N-terminal domain JCP76_02795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JCP76_02795 PF12008 Type I restriction and modification enzyme - subunit R C terminal JCP76_02795 PF18766 SWI2/SNF2 ATPase JCP76_02815 PF00005 ABC transporter JCP76_02815 PF12704 MacB-like periplasmic core domain JCP76_02815 PF02687 FtsX-like permease family JCP76_02825 PF13145 PPIC-type PPIASE domain JCP76_02835 PF00781 Diacylglycerol kinase catalytic domain JCP76_02870 PF01638 HxlR-like helix-turn-helix JCP76_02880 PF04203 Sortase domain JCP76_02885 PF00874 PRD domain JCP76_02885 PF03123 CAT RNA binding domain JCP76_02890 PF00367 phosphotransferase system, EIIB JCP76_02890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_02890 PF02378 Phosphotransferase system, EIIC JCP76_02895 PF00232 Glycosyl hydrolase family 1 JCP76_02900 PF07702 UTRA domain JCP76_02900 PF00392 Bacterial regulatory proteins, gntR family JCP76_02910 PF03641 Possible lysine decarboxylase JCP76_02920 PF01712 Deoxynucleoside kinase JCP76_02935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP76_02935 PF00356 Bacterial regulatory proteins, lacI family JCP76_02940 PF00232 Glycosyl hydrolase family 1 JCP76_02950 PF00884 Sulfatase JCP76_02960 PF00334 Nucleoside diphosphate kinase JCP76_02965 PF00689 Cation transporting ATPase, C-terminus JCP76_02965 PF00690 Cation transporter/ATPase, N-terminus JCP76_02970 PF13419 Haloacid dehalogenase-like hydrolase JCP76_02975 PF09383 NIL domain JCP76_02975 PF00005 ABC transporter JCP76_02980 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_02985 PF03180 NLPA lipoprotein JCP76_02990 PF01546 Peptidase family M20/M25/M40 JCP76_02990 PF07687 Peptidase dimerisation domain JCP76_02995 PF03553 Na+/H+ antiporter family JCP76_03010 PF00324 Amino acid permease JCP76_03020 PF02558 Ketopantoate reductase PanE/ApbA JCP76_03020 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCP76_03025 PF02595 Glycerate kinase family JCP76_03030 PF12848 ABC transporter JCP76_03030 PF00005 ABC transporter JCP76_03035 PF00300 Histidine phosphatase superfamily (branch 1) JCP76_03045 PF13580 SIS domain JCP76_03050 PF02378 Phosphotransferase system, EIIC JCP76_03050 PF00367 phosphotransferase system, EIIB JCP76_03055 PF07972 NrdI Flavodoxin like JCP76_03060 PF13520 Amino acid permease JCP76_03065 PF12679 ABC-2 family transporter protein JCP76_03070 PF00005 ABC transporter JCP76_03075 PF00893 Small Multidrug Resistance protein JCP76_03090 PF01470 Pyroglutamyl peptidase JCP76_03105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCP76_03135 PF03167 Uracil DNA glycosylase superfamily JCP76_03140 PF01515 Phosphate acetyl/butaryl transferase JCP76_03145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCP76_03150 PF13302 Acetyltransferase (GNAT) domain JCP76_03155 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCP76_03155 PF02811 PHP domain JCP76_03155 PF14480 DNA polymerase III polC-type N-terminus I JCP76_03155 PF00929 Exonuclease JCP76_03155 PF14579 Helix-hairpin-helix motif JCP76_03155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCP76_03155 PF11490 DNA polymerase III polC-type N-terminus II JCP76_03160 PF03372 Endonuclease/Exonuclease/phosphatase family JCP76_03165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP76_03170 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCP76_03170 PF01565 FAD binding domain JCP76_03195 PF00890 FAD binding domain JCP76_03195 PF14537 Cytochrome c3 JCP76_03205 PF13460 NAD(P)H-binding JCP76_03210 PF12822 ECF transporter, substrate-specific component JCP76_03215 PF02441 Flavoprotein JCP76_03220 PF02441 Flavoprotein JCP76_03220 PF04127 DNA / pantothenate metabolism flavoprotein JCP76_03225 PF08240 Alcohol dehydrogenase GroES-like domain JCP76_03225 PF00107 Zinc-binding dehydrogenase JCP76_03235 PF08402 TOBE domain JCP76_03235 PF00005 ABC transporter JCP76_03240 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_03245 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_03250 PF13416 Bacterial extracellular solute-binding protein JCP76_03255 PF02954 Bacterial regulatory protein, Fis family JCP76_03255 PF00158 Sigma-54 interaction domain JCP76_03265 PF03830 PTS system sorbose subfamily IIB component JCP76_03270 PF03609 PTS system sorbose-specific iic component JCP76_03275 PF03613 PTS system mannose/fructose/sorbose family IID component JCP76_03290 PF00480 ROK family JCP76_03320 PF00589 Phage integrase family JCP76_03320 PF14659 Phage integrase, N-terminal SAM-like domain JCP76_03325 PF01717 Cobalamin-independent synthase, Catalytic domain JCP76_03335 PF13411 MerR HTH family regulatory protein JCP76_03340 PF03951 Glutamine synthetase, beta-Grasp domain JCP76_03340 PF00120 Glutamine synthetase, catalytic domain JCP76_03345 PF06418 CTP synthase N-terminus JCP76_03345 PF00117 Glutamine amidotransferase class-I JCP76_03350 PF01116 Fructose-bisphosphate aldolase class-II JCP76_03355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCP76_03360 PF07497 Rho termination factor, RNA-binding domain JCP76_03360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP76_03360 PF07498 Rho termination factor, N-terminal domain JCP76_03365 PF01197 Ribosomal protein L31 JCP76_03375 PF02378 Phosphotransferase system, EIIC JCP76_03375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_03380 PF01116 Fructose-bisphosphate aldolase class-II JCP76_03385 PF00455 DeoR C terminal sensor domain JCP76_03385 PF08220 DeoR-like helix-turn-helix domain JCP76_03395 PF07690 Major Facilitator Superfamily JCP76_03405 PF13545 Crp-like helix-turn-helix domain JCP76_03425 PF12169 DNA polymerase III subunits gamma and tau domain III JCP76_03430 PF02575 YbaB/EbfC DNA-binding family JCP76_03435 PF02132 RecR protein JCP76_03435 PF13662 Toprim domain JCP76_03440 PF02223 Thymidylate kinase JCP76_03445 PF06153 Cyclic-di-AMP receptor JCP76_03450 PF09115 DNA polymerase III, delta subunit, C terminal JCP76_03455 PF04468 PSP1 C-terminal conserved region JCP76_03460 PF06156 Initiation control protein YabA JCP76_03465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCP76_03470 PF11798 IMS family HHH motif JCP76_03470 PF11799 impB/mucB/samB family C-terminal domain JCP76_03470 PF00817 impB/mucB/samB family JCP76_03480 PF03477 ATP cone domain JCP76_03480 PF13597 Anaerobic ribonucleoside-triphosphate reductase JCP76_03485 PF00005 ABC transporter JCP76_03490 PF02687 FtsX-like permease family JCP76_03500 PF13193 AMP-binding enzyme C-terminal domain JCP76_03500 PF00501 AMP-binding enzyme JCP76_03505 PF03062 MBOAT, membrane-bound O-acyltransferase family JCP76_03510 PF00550 Phosphopantetheine attachment site JCP76_03515 PF04914 DltD protein JCP76_03520 PF05343 M42 glutamyl aminopeptidase JCP76_03530 PF12706 Beta-lactamase superfamily domain JCP76_03535 PF03099 Biotin/lipoate A/B protein ligase family JCP76_03535 PF10437 Bacterial lipoate protein ligase C-terminus JCP76_03545 PF00872 Transposase, Mutator family JCP76_03565 PF06993 Protein of unknown function (DUF1304) JCP76_03570 PF00916 Sulfate permease family JCP76_03570 PF01740 STAS domain JCP76_03580 PF00829 Ribosomal prokaryotic L21 protein JCP76_03590 PF01016 Ribosomal L27 protein JCP76_03595 PF01610 Transposase JCP76_03595 PF13683 Integrase core domain JCP76_03600 PF03610 PTS system fructose IIA component JCP76_03600 PF00874 PRD domain JCP76_03600 PF00158 Sigma-54 interaction domain JCP76_03605 PF03610 PTS system fructose IIA component JCP76_03605 PF03830 PTS system sorbose subfamily IIB component JCP76_03610 PF03830 PTS system sorbose subfamily IIB component JCP76_03610 PF03610 PTS system fructose IIA component JCP76_03615 PF03609 PTS system sorbose-specific iic component JCP76_03620 PF03613 PTS system mannose/fructose/sorbose family IID component JCP76_03630 PF04226 Transglycosylase associated protein JCP76_03635 PF00557 Metallopeptidase family M24 JCP76_03635 PF01321 Creatinase/Prolidase N-terminal domain JCP76_03640 PF03780 Asp23 family, cell envelope-related function JCP76_03645 PF01029 NusB family JCP76_03650 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCP76_03650 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCP76_03655 PF13742 OB-fold nucleic acid binding domain JCP76_03655 PF02601 Exonuclease VII, large subunit JCP76_03660 PF02609 Exonuclease VII small subunit JCP76_03665 PF00348 Polyprenyl synthetase JCP76_03670 PF01479 S4 domain JCP76_03670 PF01728 FtsJ-like methyltransferase JCP76_03675 PF02863 Arginine repressor, C-terminal domain JCP76_03675 PF01316 Arginine repressor, DNA binding domain JCP76_03680 PF13476 AAA domain JCP76_03705 PF02381 MraZ protein, putative antitoxin-like JCP76_03710 PF01795 MraW methylase family JCP76_03720 PF00905 Penicillin binding protein transpeptidase domain JCP76_03720 PF03793 PASTA domain JCP76_03720 PF03717 Penicillin-binding Protein dimerisation domain JCP76_03725 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JCP76_03725 PF00953 Glycosyl transferase family 4 JCP76_03730 PF02875 Mur ligase family, glutamate ligase domain JCP76_03730 PF08245 Mur ligase middle domain JCP76_03735 PF04101 Glycosyltransferase family 28 C-terminal domain JCP76_03735 PF03033 Glycosyltransferase family 28 N-terminal domain JCP76_03740 PF03799 Cell division protein FtsQ JCP76_03740 PF08478 POTRA domain, FtsQ-type JCP76_03745 PF11983 Membrane-attachment and polymerisation-promoting switch JCP76_03745 PF02491 SHS2 domain inserted in FTSA JCP76_03750 PF00091 Tubulin/FtsZ family, GTPase domain JCP76_03750 PF12327 FtsZ family, C-terminal domain JCP76_03755 PF01168 Alanine racemase, N-terminal domain JCP76_03760 PF04472 Cell division protein SepF JCP76_03770 PF17774 Putative RNA-binding domain in YlmH JCP76_03770 PF01479 S4 domain JCP76_03775 PF05103 DivIVA protein JCP76_03780 PF00133 tRNA synthetases class I (I, L, M and V) JCP76_03780 PF08264 Anticodon-binding domain of tRNA JCP76_03780 PF06827 Zinc finger found in FPG and IleRS JCP76_03785 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JCP76_03785 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JCP76_03800 PF17746 SfsA N-terminal OB domain JCP76_03800 PF03749 Sugar fermentation stimulation protein RE domain JCP76_03805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP76_03810 PF00270 DEAD/DEAH box helicase JCP76_03810 PF00271 Helicase conserved C-terminal domain JCP76_03815 PF00158 Sigma-54 interaction domain JCP76_03815 PF03610 PTS system fructose IIA component JCP76_03815 PF00874 PRD domain JCP76_03820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_03825 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP76_03830 PF02378 Phosphotransferase system, EIIC JCP76_03870 PF00872 Transposase, Mutator family JCP76_03875 PF02073 Thermophilic metalloprotease (M29) JCP76_03885 PF00258 Flavodoxin JCP76_03890 PF00557 Metallopeptidase family M24 JCP76_03895 PF03631 Virulence factor BrkB JCP76_03900 PF00953 Glycosyl transferase family 4 JCP76_03915 PF00535 Glycosyl transferase family 2 JCP76_03920 PF00483 Nucleotidyl transferase JCP76_03925 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JCP76_03930 PF16363 GDP-mannose 4,6 dehydratase JCP76_03935 PF04321 RmlD substrate binding domain JCP76_03950 PF01061 ABC-2 type transporter JCP76_03955 PF08239 Bacterial SH3 domain JCP76_03955 PF00005 ABC transporter JCP76_03960 PF00398 Ribosomal RNA adenine dimethylase JCP76_03965 PF00535 Glycosyl transferase family 2 JCP76_03980 PF02397 Bacterial sugar transferase JCP76_03985 PF00535 Glycosyl transferase family 2 JCP76_03990 PF00534 Glycosyl transferases group 1 JCP76_03990 PF13439 Glycosyltransferase Family 4 JCP76_04015 PF02719 Polysaccharide biosynthesis protein JCP76_04020 PF03102 NeuB family JCP76_04020 PF08666 SAF domain JCP76_04025 PF02350 UDP-N-acetylglucosamine 2-epimerase JCP76_04035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JCP76_04050 PF02348 Cytidylyltransferase JCP76_04055 PF01370 NAD dependent epimerase/dehydratase family JCP76_04060 PF13683 Integrase core domain JCP76_04060 PF01610 Transposase JCP76_04100 PF00872 Transposase, Mutator family JCP76_04105 PF09586 Bacterial membrane protein YfhO JCP76_04115 PF02618 YceG-like family JCP76_04120 PF01272 Transcription elongation factor, GreA/GreB, C-term JCP76_04120 PF03449 Transcription elongation factor, N-terminal JCP76_04130 PF07730 Histidine kinase JCP76_04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_04130 PF00672 HAMP domain JCP76_04135 PF00196 Bacterial regulatory proteins, luxR family JCP76_04135 PF00072 Response regulator receiver domain JCP76_04140 PF02254 TrkA-N domain JCP76_04140 PF02080 TrkA-C domain JCP76_04155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP76_04165 PF01545 Cation efflux family JCP76_04170 PF04138 GtrA-like protein JCP76_04175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCP76_04175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCP76_04180 PF00313 'Cold-shock' DNA-binding domain JCP76_04190 PF03816 Cell envelope-related transcriptional attenuator domain JCP76_04195 PF03073 TspO/MBR family JCP76_04200 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JCP76_04205 PF05958 tRNA (Uracil-5-)-methyltransferase JCP76_04205 PF01938 TRAM domain JCP76_04210 PF02631 RecX family JCP76_04215 PF00730 HhH-GPD superfamily base excision DNA repair protein JCP76_04215 PF14815 NUDIX domain JCP76_04220 PF04167 Protein of unknown function (DUF402) JCP76_04225 PF00583 Acetyltransferase (GNAT) family JCP76_04230 PF01594 AI-2E family transporter JCP76_04235 PF03471 Transporter associated domain JCP76_04235 PF01595 Cyclin M transmembrane N-terminal domain JCP76_04235 PF00571 CBS domain JCP76_04240 PF00009 Elongation factor Tu GTP binding domain JCP76_04240 PF16658 Class II release factor RF3, C-terminal domain JCP76_04240 PF03144 Elongation factor Tu domain 2 JCP76_04260 PF07724 AAA domain (Cdc48 subfamily) JCP76_04260 PF17871 AAA lid domain JCP76_04260 PF10431 C-terminal, D2-small domain, of ClpB protein JCP76_04260 PF00004 ATPase family associated with various cellular activities (AAA) JCP76_04265 PF00381 PTS HPr component phosphorylation site JCP76_04270 PF05524 PEP-utilising enzyme, N-terminal JCP76_04270 PF00391 PEP-utilising enzyme, mobile domain JCP76_04270 PF02896 PEP-utilising enzyme, TIM barrel domain JCP76_04275 PF13439 Glycosyltransferase Family 4 JCP76_04275 PF00534 Glycosyl transferases group 1 JCP76_04280 PF00534 Glycosyl transferases group 1 JCP76_04280 PF13439 Glycosyltransferase Family 4 JCP76_04285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCP76_04285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCP76_04290 PF08796 Protein of unknown function (DUF1797) JCP76_04295 PF02151 UvrB/uvrC motif JCP76_04295 PF08459 UvrC Helix-hairpin-helix N-terminal JCP76_04295 PF01541 GIY-YIG catalytic domain JCP76_04300 PF01047 MarR family JCP76_04305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCP76_04305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCP76_04310 PF00550 Phosphopantetheine attachment site JCP76_04315 PF00698 Acyl transferase domain JCP76_04325 PF02801 Beta-ketoacyl synthase, C-terminal domain JCP76_04325 PF00109 Beta-ketoacyl synthase, N-terminal domain JCP76_04330 PF00364 Biotin-requiring enzyme JCP76_04335 PF07977 FabA-like domain JCP76_04340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCP76_04340 PF00289 Biotin carboxylase, N-terminal domain JCP76_04340 PF02785 Biotin carboxylase C-terminal domain JCP76_04345 PF01039 Carboxyl transferase domain JCP76_04350 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCP76_04360 PF01926 50S ribosome-binding GTPase JCP76_04365 PF01985 CRS1 / YhbY (CRM) domain JCP76_04370 PF01467 Cytidylyltransferase-like JCP76_04375 PF01966 HD domain JCP76_04385 PF13649 Methyltransferase domain JCP76_04390 PF05636 HIGH Nucleotidyl Transferase JCP76_04395 PF01709 Transcriptional regulator JCP76_04405 PF13538 UvrD-like helicase C-terminal domain JCP76_04410 PF00403 Heavy-metal-associated domain JCP76_04415 PF01361 Tautomerase enzyme JCP76_04420 PF03129 Anticodon binding domain JCP76_04420 PF02824 TGS domain JCP76_04420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCP76_04420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCP76_04430 PF01418 Helix-turn-helix domain, rpiR family JCP76_04430 PF01380 SIS domain JCP76_04435 PF03717 Penicillin-binding Protein dimerisation domain JCP76_04435 PF00905 Penicillin binding protein transpeptidase domain JCP76_04445 PF00860 Permease family JCP76_04450 PF07690 Major Facilitator Superfamily JCP76_04460 PF14579 Helix-hairpin-helix motif JCP76_04460 PF02811 PHP domain JCP76_04460 PF01336 OB-fold nucleic acid binding domain JCP76_04460 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCP76_04460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCP76_04465 PF00365 Phosphofructokinase JCP76_04470 PF00391 PEP-utilising enzyme, mobile domain JCP76_04470 PF00224 Pyruvate kinase, barrel domain JCP76_04470 PF02887 Pyruvate kinase, alpha/beta domain JCP76_04475 PF03466 LysR substrate binding domain JCP76_04475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP76_04485 PF01783 Ribosomal L32p protein family JCP76_04495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCP76_04495 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JCP76_04500 PF00072 Response regulator receiver domain JCP76_04500 PF00486 Transcriptional regulatory protein, C terminal JCP76_04505 PF00512 His Kinase A (phospho-acceptor) domain JCP76_04505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_04505 PF18719 ArlS sensor domain JCP76_04605 PF00874 PRD domain JCP76_04605 PF03123 CAT RNA binding domain JCP76_04610 PF04794 YdjC-like protein JCP76_04615 PF00367 phosphotransferase system, EIIB JCP76_04615 PF02378 Phosphotransferase system, EIIC JCP76_04615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_04620 PF11975 Family 4 glycosyl hydrolase C-terminal domain JCP76_04620 PF02056 Family 4 glycosyl hydrolase JCP76_04625 PF00367 phosphotransferase system, EIIB JCP76_04625 PF02378 Phosphotransferase system, EIIC JCP76_04625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_04630 PF02378 Phosphotransferase system, EIIC JCP76_04650 PF08220 DeoR-like helix-turn-helix domain JCP76_04650 PF00455 DeoR C terminal sensor domain JCP76_04660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_04665 PF03611 PTS system sugar-specific permease component JCP76_04675 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCP76_04680 PF01261 Xylose isomerase-like TIM barrel JCP76_04685 PF00596 Class II Aldolase and Adducin N-terminal domain JCP76_04690 PF00583 Acetyltransferase (GNAT) family JCP76_04710 PF00874 PRD domain JCP76_04710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_04710 PF08279 HTH domain JCP76_04710 PF05043 Mga helix-turn-helix domain JCP76_04710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_04730 PF03611 PTS system sugar-specific permease component JCP76_04745 PF01738 Dienelactone hydrolase family JCP76_04750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCP76_04755 PF00392 Bacterial regulatory proteins, gntR family JCP76_04755 PF07702 UTRA domain JCP76_04760 PF02378 Phosphotransferase system, EIIC JCP76_04765 PF00232 Glycosyl hydrolase family 1 JCP76_04770 PF00582 Universal stress protein family JCP76_04775 PF03551 Transcriptional regulator PadR-like family JCP76_04785 PF03960 ArsC family JCP76_04795 PF08543 Phosphomethylpyrimidine kinase JCP76_04800 PF13091 PLD-like domain JCP76_04800 PF13396 Phospholipase_D-nuclease N-terminal JCP76_04805 PF00690 Cation transporter/ATPase, N-terminus JCP76_04805 PF00689 Cation transporting ATPase, C-terminus JCP76_04815 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JCP76_04815 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JCP76_04820 PF00108 Thiolase, N-terminal domain JCP76_04820 PF02803 Thiolase, C-terminal domain JCP76_04835 PF00248 Aldo/keto reductase family JCP76_04850 PF03143 Elongation factor Tu C-terminal domain JCP76_04850 PF03144 Elongation factor Tu domain 2 JCP76_04850 PF00009 Elongation factor Tu GTP binding domain JCP76_04855 PF09924 Uncharacterised conserved protein (DUF2156) JCP76_04855 PF03706 Lysylphosphatidylglycerol synthase TM region JCP76_04860 PF00561 alpha/beta hydrolase fold JCP76_04880 PF01807 CHC2 zinc finger JCP76_04880 PF10410 DnaB-helicase binding domain of primase JCP76_04880 PF08275 DNA primase catalytic core, N-terminal domain JCP76_04885 PF04542 Sigma-70 region 2 JCP76_04885 PF00140 Sigma-70 factor, region 1.2 JCP76_04885 PF04539 Sigma-70 region 3 JCP76_04885 PF03979 Sigma-70 factor, region 1.1 JCP76_04885 PF04545 Sigma-70, region 4 JCP76_04890 PF18041 MapZ extracellular domain 1 JCP76_04890 PF18708 MapZ extracellular C-terminal domain 2 JCP76_04895 PF17783 CvfB-like winged helix domain JCP76_04895 PF13509 S1 domain JCP76_04900 PF01475 Ferric uptake regulator family JCP76_04910 PF00589 Phage integrase family JCP76_04910 PF02899 Phage integrase, N-terminal SAM-like domain JCP76_04920 PF02616 Segregation and condensation protein ScpA JCP76_04925 PF04079 Segregation and condensation complex subunit ScpB JCP76_04930 PF00849 RNA pseudouridylate synthase JCP76_04930 PF01479 S4 domain JCP76_04935 PF12822 ECF transporter, substrate-specific component JCP76_04940 PF03606 C4-dicarboxylate anaerobic carrier JCP76_04945 PF01546 Peptidase family M20/M25/M40 JCP76_04965 PF00270 DEAD/DEAH box helicase JCP76_04965 PF00271 Helicase conserved C-terminal domain JCP76_04975 PF02224 Cytidylate kinase JCP76_04980 PF00575 S1 RNA binding domain JCP76_04985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCP76_04985 PF01926 50S ribosome-binding GTPase JCP76_04990 PF00216 Bacterial DNA-binding protein JCP76_05010 PF08858 IDEAL domain JCP76_05010 PF08864 UPF0302 domain JCP76_05015 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP76_05015 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP76_05020 PF03819 MazG nucleotide pyrophosphohydrolase domain JCP76_05025 PF13735 tRNA nucleotidyltransferase domain 2 putative JCP76_05025 PF12627 Probable RNA and SrmB- binding site of polymerase A JCP76_05025 PF01743 Poly A polymerase head domain JCP76_05045 PF00999 Sodium/hydrogen exchanger family JCP76_05050 PF00005 ABC transporter JCP76_05050 PF16326 ABC transporter C-terminal domain JCP76_05050 PF12848 ABC transporter JCP76_05055 PF00303 Thymidylate synthase JCP76_05060 PF00186 Dihydrofolate reductase JCP76_05065 PF03006 Haemolysin-III related JCP76_05070 PF02645 Uncharacterised protein, DegV family COG1307 JCP76_05075 PF13472 GDSL-like Lipase/Acylhydrolase family JCP76_05080 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JCP76_05085 PF01625 Peptide methionine sulfoxide reductase JCP76_05090 PF06855 YozE SAM-like fold JCP76_05095 PF10502 Signal peptidase, peptidase S26 JCP76_05115 PF01926 50S ribosome-binding GTPase JCP76_05120 PF01351 Ribonuclease HII JCP76_05125 PF02481 DNA recombination-mediator protein A JCP76_05125 PF18255 DNA processing protein A sterile alpha motif domain JCP76_05130 PF01131 DNA topoisomerase JCP76_05130 PF01396 Topoisomerase DNA binding C4 zinc finger JCP76_05130 PF01751 Toprim domain JCP76_05135 PF01134 Glucose inhibited division protein A JCP76_05140 PF02899 Phage integrase, N-terminal SAM-like domain JCP76_05140 PF00589 Phage integrase family JCP76_05145 PF00227 Proteasome subunit JCP76_05150 PF00004 ATPase family associated with various cellular activities (AAA) JCP76_05150 PF07724 AAA domain (Cdc48 subfamily) JCP76_05150 PF10431 C-terminal, D2-small domain, of ClpB protein JCP76_05155 PF06018 CodY GAF-like domain JCP76_05155 PF08222 CodY helix-turn-helix domain JCP76_05170 PF02660 Glycerol-3-phosphate acyltransferase JCP76_05175 PF13380 CoA binding domain JCP76_05180 PF00204 DNA gyrase B JCP76_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_05180 PF01751 Toprim domain JCP76_05180 PF00986 DNA gyrase B subunit, carboxyl terminus JCP76_05185 PF00521 DNA gyrase/topoisomerase IV, subunit A JCP76_05185 PF03989 DNA gyrase C-terminal domain, beta-propeller JCP76_05190 PF01228 Glycine radical JCP76_05190 PF02901 Pyruvate formate lyase-like JCP76_05195 PF04055 Radical SAM superfamily JCP76_05200 PF02833 DHHA2 domain JCP76_05200 PF01368 DHH family JCP76_05220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP76_05230 PF00326 Prolyl oligopeptidase family JCP76_05235 PF00356 Bacterial regulatory proteins, lacI family JCP76_05245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP76_05245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP76_05260 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCP76_05265 PF00005 ABC transporter JCP76_05265 PF00571 CBS domain JCP76_05270 PF00403 Heavy-metal-associated domain JCP76_05270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_05270 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_05275 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_05285 PF00005 ABC transporter JCP76_05290 PF01026 TatD related DNase JCP76_05295 PF01476 LysM domain JCP76_05295 PF05257 CHAP domain JCP76_05315 PF00872 Transposase, Mutator family JCP76_05325 PF01610 Transposase JCP76_05325 PF13683 Integrase core domain JCP76_05345 PF00155 Aminotransferase class I and II JCP76_05355 PF01979 Amidohydrolase family JCP76_05365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP76_05365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP76_05370 PF00072 Response regulator receiver domain JCP76_05375 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JCP76_05375 PF17203 Single cache domain 3 JCP76_05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_05375 PF00989 PAS fold JCP76_05380 PF00989 PAS fold JCP76_05380 PF17203 Single cache domain 3 JCP76_05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_05380 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JCP76_05390 PF01145 SPFH domain / Band 7 family JCP76_05390 PF15975 Flotillin JCP76_05405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP76_05405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP76_05415 PF02557 D-alanyl-D-alanine carboxypeptidase JCP76_05420 PF01476 LysM domain JCP76_05420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP76_05430 PF13416 Bacterial extracellular solute-binding protein JCP76_05435 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_05440 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_05450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP76_05450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP76_05455 PF00156 Phosphoribosyl transferase domain JCP76_05460 PF00860 Permease family JCP76_05465 PF00731 AIR carboxylase JCP76_05470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCP76_05470 PF02222 ATP-grasp domain JCP76_05475 PF10397 Adenylosuccinate lyase C-terminus JCP76_05475 PF00206 Lyase JCP76_05485 PF01259 SAICAR synthetase JCP76_05490 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JCP76_05500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCP76_05500 PF00586 AIR synthase related protein, N-terminal domain JCP76_05500 PF02769 AIR synthase related protein, C-terminal domain JCP76_05505 PF00156 Phosphoribosyl transferase domain JCP76_05505 PF13537 Glutamine amidotransferase domain JCP76_05510 PF02769 AIR synthase related protein, C-terminal domain JCP76_05510 PF00586 AIR synthase related protein, N-terminal domain JCP76_05515 PF00551 Formyl transferase JCP76_05520 PF02142 MGS-like domain JCP76_05520 PF01808 AICARFT/IMPCHase bienzyme JCP76_05525 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCP76_05525 PF02843 Phosphoribosylglycinamide synthetase, C domain JCP76_05525 PF02844 Phosphoribosylglycinamide synthetase, N domain JCP76_05530 PF00248 Aldo/keto reductase family JCP76_05535 PF00072 Response regulator receiver domain JCP76_05535 PF04397 LytTr DNA-binding domain JCP76_05540 PF06580 Histidine kinase JCP76_05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_05540 PF02743 Cache domain JCP76_05540 PF00672 HAMP domain JCP76_05550 PF13407 Periplasmic binding protein domain JCP76_05555 PF00005 ABC transporter JCP76_05560 PF02653 Branched-chain amino acid transport system / permease component JCP76_05565 PF00478 IMP dehydrogenase / GMP reductase domain JCP76_05570 PF00392 Bacterial regulatory proteins, gntR family JCP76_05570 PF00155 Aminotransferase class I and II JCP76_05575 PF00676 Dehydrogenase E1 component JCP76_05580 PF02780 Transketolase, C-terminal domain JCP76_05580 PF02779 Transketolase, pyrimidine binding domain JCP76_05585 PF02817 e3 binding domain JCP76_05585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCP76_05585 PF00364 Biotin-requiring enzyme JCP76_05590 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_05590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_05595 PF05256 Uncharacterised protein family (UPF0223) JCP76_05600 PF00459 Inositol monophosphatase family JCP76_05605 PF00009 Elongation factor Tu GTP binding domain JCP76_05605 PF14492 Elongation Factor G, domain II JCP76_05605 PF03144 Elongation factor Tu domain 2 JCP76_05605 PF00679 Elongation factor G C-terminus JCP76_05610 PF00570 HRDC domain JCP76_05610 PF09382 RQC domain JCP76_05610 PF00271 Helicase conserved C-terminal domain JCP76_05610 PF16124 RecQ zinc-binding JCP76_05610 PF00270 DEAD/DEAH box helicase JCP76_05615 PF07408 Protein of unknown function (DUF1507) JCP76_05620 PF01098 Cell cycle protein JCP76_05625 PF00364 Biotin-requiring enzyme JCP76_05625 PF00289 Biotin carboxylase, N-terminal domain JCP76_05625 PF00682 HMGL-like JCP76_05625 PF02436 Conserved carboxylase domain JCP76_05625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCP76_05625 PF02785 Biotin carboxylase C-terminal domain JCP76_05640 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JCP76_05650 PF01467 Cytidylyltransferase-like JCP76_05655 PF05362 Lon protease (S16) C-terminal proteolytic domain JCP76_05655 PF13180 PDZ domain JCP76_05660 PF10531 SLBB domain JCP76_05675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCP76_05680 PF03772 Competence protein JCP76_05680 PF13567 Domain of unknown function (DUF4131) JCP76_05680 PF00753 Metallo-beta-lactamase superfamily JCP76_05685 PF06144 DNA polymerase III, delta subunit JCP76_05690 PF01649 Ribosomal protein S20 JCP76_05700 PF04284 Protein of unknown function (DUF441) JCP76_05710 PF02673 Bacitracin resistance protein BacA JCP76_05720 PF00753 Metallo-beta-lactamase superfamily JCP76_05730 PF04461 Protein of unknown function (DUF520) JCP76_05735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP76_05735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP76_05740 PF01883 Iron-sulfur cluster assembly protein JCP76_05755 PF05257 CHAP domain JCP76_05755 PF01476 LysM domain JCP76_05810 PF13529 Peptidase_C39 like family JCP76_05830 PF00854 POT family JCP76_05840 PF12705 PD-(D/E)XK nuclease superfamily JCP76_05845 PF13361 UvrD-like helicase C-terminal domain JCP76_05845 PF00580 UvrD/REP helicase N-terminal domain JCP76_05845 PF12705 PD-(D/E)XK nuclease superfamily JCP76_05850 PF01638 HxlR-like helix-turn-helix JCP76_05855 PF01409 tRNA synthetases class II core domain (F) JCP76_05855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCP76_05860 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCP76_05860 PF01588 Putative tRNA binding domain JCP76_05860 PF03147 Ferredoxin-fold anticodon binding domain JCP76_05860 PF03484 tRNA synthetase B5 domain JCP76_05860 PF03483 B3/4 domain JCP76_05865 PF00579 tRNA synthetases class I (W and Y) JCP76_05870 PF00005 ABC transporter JCP76_05875 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCP76_05880 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_05885 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_05890 PF01177 Asp/Glu/Hydantoin racemase JCP76_05895 PF03725 3' exoribonuclease family, domain 2 JCP76_05895 PF01138 3' exoribonuclease family, domain 1 JCP76_05910 PF00924 Mechanosensitive ion channel JCP76_05915 PF01063 Amino-transferase class IV JCP76_05925 PF07977 FabA-like domain JCP76_05930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCP76_05950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCP76_05950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCP76_05955 PF01018 GTP1/OBG JCP76_05955 PF09269 Domain of unknown function (DUF1967) JCP76_05955 PF01926 50S ribosome-binding GTPase JCP76_05965 PF12706 Beta-lactamase superfamily domain JCP76_05965 PF00753 Metallo-beta-lactamase superfamily JCP76_05970 PF00106 short chain dehydrogenase JCP76_05975 PF06305 Lipopolysaccharide assembly protein A domain JCP76_05980 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JCP76_05980 PF17768 RecJ OB domain JCP76_05980 PF02272 DHHA1 domain JCP76_05980 PF01368 DHH family JCP76_05985 PF00156 Phosphoribosyl transferase domain JCP76_05995 PF01726 LexA DNA binding domain JCP76_05995 PF00717 Peptidase S24-like JCP76_06000 PF05979 Bacterial protein of unknown function (DUF896) JCP76_06005 PF02780 Transketolase, C-terminal domain JCP76_06005 PF00456 Transketolase, thiamine diphosphate binding domain JCP76_06005 PF02779 Transketolase, pyrimidine binding domain JCP76_06010 PF00665 Integrase core domain JCP76_06010 PF13936 Helix-turn-helix domain JCP76_06015 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP76_06015 PF01476 LysM domain JCP76_06020 PF00291 Pyridoxal-phosphate dependent enzyme JCP76_06025 PF01475 Ferric uptake regulator family JCP76_06030 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_06030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_06045 PF07690 Major Facilitator Superfamily JCP76_06050 PF07261 Replication initiation and membrane attachment JCP76_06055 PF00633 Helix-hairpin-helix motif JCP76_06055 PF00730 HhH-GPD superfamily base excision DNA repair protein JCP76_06055 PF10576 Iron-sulfur binding domain of endonuclease III JCP76_06065 PF00905 Penicillin binding protein transpeptidase domain JCP76_06065 PF00912 Transglycosylase JCP76_06070 PF03838 Recombination protein U JCP76_06075 PF06908 YspA SLOG family JCP76_06080 PF05103 DivIVA protein JCP76_06090 PF01170 Putative RNA methylase family UPF0020 JCP76_06090 PF02926 THUMP domain JCP76_06095 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JCP76_06100 PF01966 HD domain JCP76_06105 PF00155 Aminotransferase class I and II JCP76_06110 PF01370 NAD dependent epimerase/dehydratase family JCP76_06115 PF13520 Amino acid permease JCP76_06130 PF00271 Helicase conserved C-terminal domain JCP76_06130 PF00270 DEAD/DEAH box helicase JCP76_06135 PF13673 Acetyltransferase (GNAT) domain JCP76_06140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCP76_06140 PF01411 tRNA synthetases class II (A) JCP76_06140 PF02272 DHHA1 domain JCP76_06145 PF12822 ECF transporter, substrate-specific component JCP76_06155 PF13456 Reverse transcriptase-like JCP76_06160 PF17255 EbsA-like protein JCP76_06165 PF00313 'Cold-shock' DNA-binding domain JCP76_06170 PF01268 Formate--tetrahydrofolate ligase JCP76_06185 PF01252 Signal peptidase (SPase) II JCP76_06190 PF00849 RNA pseudouridylate synthase JCP76_06190 PF01479 S4 domain JCP76_06195 PF00156 Phosphoribosyl transferase domain JCP76_06200 PF00860 Permease family JCP76_06205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCP76_06205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCP76_06210 PF01979 Amidohydrolase family JCP76_06215 PF00117 Glutamine amidotransferase class-I JCP76_06215 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCP76_06220 PF02142 MGS-like domain JCP76_06220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCP76_06220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCP76_06225 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JCP76_06225 PF00970 Oxidoreductase FAD-binding domain JCP76_06230 PF01180 Dihydroorotate dehydrogenase JCP76_06235 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCP76_06240 PF00156 Phosphoribosyl transferase domain JCP76_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP76_06260 PF03466 LysR substrate binding domain JCP76_06265 PF05670 NFACT protein RNA binding domain JCP76_06280 PF02653 Branched-chain amino acid transport system / permease component JCP76_06285 PF00005 ABC transporter JCP76_06290 PF08501 Shikimate dehydrogenase substrate binding domain JCP76_06290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCP76_06295 PF03816 Cell envelope-related transcriptional attenuator domain JCP76_06305 PF01131 DNA topoisomerase JCP76_06305 PF01751 Toprim domain JCP76_06325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCP76_06325 PF00056 lactate/malate dehydrogenase, NAD binding domain JCP76_06330 PF12833 Helix-turn-helix domain JCP76_06330 PF02311 AraC-like ligand binding domain JCP76_06345 PF03611 PTS system sugar-specific permease component JCP76_06355 PF08279 HTH domain JCP76_06355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_06355 PF00874 PRD domain JCP76_06355 PF05043 Mga helix-turn-helix domain JCP76_06355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_06365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP76_06365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP76_06405 PF00005 ABC transporter JCP76_06415 PF00486 Transcriptional regulatory protein, C terminal JCP76_06415 PF00072 Response regulator receiver domain JCP76_06420 PF00512 His Kinase A (phospho-acceptor) domain JCP76_06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_06425 PF11181 Heat induced stress protein YflT JCP76_06425 PF09557 Domain of unknown function (DUF2382) JCP76_06450 PF08543 Phosphomethylpyrimidine kinase JCP76_06460 PF04260 Protein of unknown function (DUF436) JCP76_06465 PF16657 Maltogenic Amylase, C-terminal domain JCP76_06465 PF00128 Alpha amylase, catalytic domain JCP76_06480 PF02645 Uncharacterised protein, DegV family COG1307 JCP76_06485 PF01943 Polysaccharide biosynthesis protein JCP76_06485 PF14667 Polysaccharide biosynthesis C-terminal domain JCP76_06500 PF16916 Dimerisation domain of Zinc Transporter JCP76_06500 PF01545 Cation efflux family JCP76_06530 PF08903 Domain of unknown function (DUF1846) JCP76_06535 PF07662 Na+ dependent nucleoside transporter C-terminus JCP76_06535 PF01773 Na+ dependent nucleoside transporter N-terminus JCP76_06540 PF00625 Guanylate kinase JCP76_06565 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_06570 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCP76_06575 PF01425 Amidase JCP76_06580 PF01180 Dihydroorotate dehydrogenase JCP76_06605 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_06610 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_06615 PF13416 Bacterial extracellular solute-binding protein JCP76_06620 PF00128 Alpha amylase, catalytic domain JCP76_06620 PF02903 Alpha amylase, N-terminal ig-like domain JCP76_06625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP76_06625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP76_06635 PF02566 OsmC-like protein JCP76_06640 PF01047 MarR family JCP76_06645 PF01594 AI-2E family transporter JCP76_06660 PF03786 D-mannonate dehydratase (UxuA) JCP76_06665 PF08125 Mannitol dehydrogenase C-terminal domain JCP76_06665 PF01232 Mannitol dehydrogenase Rossmann domain JCP76_06675 PF00578 AhpC/TSA family JCP76_06680 PF13192 Thioredoxin domain JCP76_06680 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_06695 PF00999 Sodium/hydrogen exchanger family JCP76_06700 PF05223 NTF2-like N-terminal transpeptidase domain JCP76_06700 PF03717 Penicillin-binding Protein dimerisation domain JCP76_06700 PF00905 Penicillin binding protein transpeptidase domain JCP76_06705 PF03816 Cell envelope-related transcriptional attenuator domain JCP76_06710 PF01098 Cell cycle protein JCP76_06720 PF01613 Flavin reductase like domain JCP76_06725 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JCP76_06735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCP76_06735 PF02779 Transketolase, pyrimidine binding domain JCP76_06735 PF02780 Transketolase, C-terminal domain JCP76_06745 PF04960 Glutaminase JCP76_06765 PF02486 Replication initiation factor JCP76_06765 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP76_06780 PF13683 Integrase core domain JCP76_06780 PF01610 Transposase JCP76_06785 PF01872 RibD C-terminal domain JCP76_06795 PF00186 Dihydrofolate reductase JCP76_06805 PF00909 Ammonium Transporter Family JCP76_06810 PF04226 Transglycosylase associated protein JCP76_06815 PF03780 Asp23 family, cell envelope-related function JCP76_06835 PF11188 Protein of unknown function (DUF2975) JCP76_06840 PF13443 Cro/C1-type HTH DNA-binding domain JCP76_06855 PF04226 Transglycosylase associated protein JCP76_06860 PF03780 Asp23 family, cell envelope-related function JCP76_06890 PF01501 Glycosyl transferase family 8 JCP76_06895 PF01501 Glycosyl transferase family 8 JCP76_06925 PF01381 Helix-turn-helix JCP76_06940 PF00313 'Cold-shock' DNA-binding domain JCP76_06955 PF13419 Haloacid dehalogenase-like hydrolase JCP76_06960 PF03786 D-mannonate dehydratase (UxuA) JCP76_06980 PF03830 PTS system sorbose subfamily IIB component JCP76_06985 PF03613 PTS system mannose/fructose/sorbose family IID component JCP76_06995 PF00465 Iron-containing alcohol dehydrogenase JCP76_07005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP76_07005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP76_07010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JCP76_07010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCP76_07015 PF01418 Helix-turn-helix domain, rpiR family JCP76_07015 PF02685 Glucokinase JCP76_07015 PF01380 SIS domain JCP76_07025 PF00135 Carboxylesterase family JCP76_07030 PF12146 Serine aminopeptidase, S33 JCP76_07040 PF03960 ArsC family JCP76_07065 PF13145 PPIC-type PPIASE domain JCP76_07070 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCP76_07085 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JCP76_07085 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JCP76_07090 PF03608 PTS system enzyme II sorbitol-specific factor JCP76_07100 PF05043 Mga helix-turn-helix domain JCP76_07100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_07100 PF00874 PRD domain JCP76_07100 PF08279 HTH domain JCP76_07105 PF00106 short chain dehydrogenase JCP76_07125 PF00872 Transposase, Mutator family JCP76_07135 PF00589 Phage integrase family JCP76_07135 PF02899 Phage integrase, N-terminal SAM-like domain JCP76_07140 PF14659 Phage integrase, N-terminal SAM-like domain JCP76_07140 PF00589 Phage integrase family JCP76_07160 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCP76_07160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCP76_07160 PF00703 Glycosyl hydrolases family 2 JCP76_07165 PF00933 Glycosyl hydrolase family 3 N terminal domain JCP76_07185 PF02614 Glucuronate isomerase JCP76_07190 PF03786 D-mannonate dehydratase (UxuA) JCP76_07195 PF08125 Mannitol dehydrogenase C-terminal domain JCP76_07195 PF01232 Mannitol dehydrogenase Rossmann domain JCP76_07200 PF07702 UTRA domain JCP76_07200 PF00392 Bacterial regulatory proteins, gntR family JCP76_07260 PF12648 TcpE family JCP76_07300 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP76_07300 PF02486 Replication initiation factor JCP76_07365 PF00009 Elongation factor Tu GTP binding domain JCP76_07365 PF00679 Elongation factor G C-terminus JCP76_07365 PF06421 GTP-binding protein LepA C-terminus JCP76_07365 PF03144 Elongation factor Tu domain 2 JCP76_07385 PF07724 AAA domain (Cdc48 subfamily) JCP76_07385 PF00004 ATPase family associated with various cellular activities (AAA) JCP76_07385 PF17871 AAA lid domain JCP76_07385 PF02861 Clp amino terminal domain, pathogenicity island component JCP76_07385 PF10431 C-terminal, D2-small domain, of ClpB protein JCP76_07400 PF00781 Diacylglycerol kinase catalytic domain JCP76_07405 PF01546 Peptidase family M20/M25/M40 JCP76_07405 PF07687 Peptidase dimerisation domain JCP76_07410 PF01784 NIF3 (NGG1p interacting factor 3) JCP76_07415 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JCP76_07440 PF07319 Primosomal protein DnaI N-terminus JCP76_07440 PF01695 IstB-like ATP binding protein JCP76_07450 PF03477 ATP cone domain JCP76_07460 PF01121 Dephospho-CoA kinase JCP76_07465 PF06827 Zinc finger found in FPG and IleRS JCP76_07465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCP76_07465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCP76_07470 PF01367 5'-3' exonuclease, C-terminal SAM fold JCP76_07470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCP76_07470 PF00476 DNA polymerase family A JCP76_07475 PF01027 Inhibitor of apoptosis-promoting Bax1 JCP76_07485 PF08245 Mur ligase middle domain JCP76_07485 PF01225 Mur ligase family, catalytic domain JCP76_07485 PF02875 Mur ligase family, glutamate ligase domain JCP76_07490 PF02698 DUF218 domain JCP76_07495 PF10263 SprT-like family JCP76_07500 PF09371 Tex-like protein N-terminal domain JCP76_07500 PF00575 S1 RNA binding domain JCP76_07500 PF17674 HHH domain JCP76_07500 PF16921 Tex protein YqgF-like domain JCP76_07510 PF17773 UPF0176 acylphosphatase like domain JCP76_07510 PF12368 Rhodanase C-terminal JCP76_07510 PF00581 Rhodanese-like domain JCP76_07515 PF13683 Integrase core domain JCP76_07515 PF01610 Transposase JCP76_07525 PF13419 Haloacid dehalogenase-like hydrolase JCP76_07530 PF00300 Histidine phosphatase superfamily (branch 1) JCP76_07550 PF07556 Protein of unknown function (DUF1538) JCP76_07555 PF07556 Protein of unknown function (DUF1538) JCP76_07560 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_07565 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_07570 PF13416 Bacterial extracellular solute-binding protein JCP76_07575 PF12833 Helix-turn-helix domain JCP76_07575 PF00072 Response regulator receiver domain JCP76_07580 PF12833 Helix-turn-helix domain JCP76_07585 PF02743 Cache domain JCP76_07585 PF00672 HAMP domain JCP76_07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_07585 PF06580 Histidine kinase JCP76_07590 PF00800 Prephenate dehydratase JCP76_07595 PF01202 Shikimate kinase JCP76_07600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCP76_07605 PF02153 Prephenate dehydrogenase JCP76_07605 PF01842 ACT domain JCP76_07610 PF01264 Chorismate synthase JCP76_07615 PF01761 3-dehydroquinate synthase JCP76_07620 PF00793 DAHP synthetase I family JCP76_07620 PF18152 DAHP synthase ferredoxin-like domain JCP76_07625 PF02929 Beta galactosidase small chain JCP76_07630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCP76_07630 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCP76_07630 PF00703 Glycosyl hydrolases family 2 JCP76_07635 PF16875 Glycosyl hydrolase family 36 N-terminal domain JCP76_07635 PF16874 Glycosyl hydrolase family 36 C-terminal domain JCP76_07640 PF00356 Bacterial regulatory proteins, lacI family JCP76_07650 PF01717 Cobalamin-independent synthase, Catalytic domain JCP76_07660 PF05958 tRNA (Uracil-5-)-methyltransferase JCP76_07665 PF00781 Diacylglycerol kinase catalytic domain JCP76_07670 PF02934 GatB/GatE catalytic domain JCP76_07670 PF02637 GatB domain JCP76_07675 PF01425 Amidase JCP76_07680 PF02686 Glu-tRNAGln amidotransferase C subunit JCP76_07685 PF00533 BRCA1 C Terminus (BRCT) domain JCP76_07685 PF12826 Helix-hairpin-helix motif JCP76_07685 PF01653 NAD-dependent DNA ligase adenylation domain JCP76_07685 PF03120 NAD-dependent DNA ligase OB-fold domain JCP76_07685 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCP76_07690 PF00580 UvrD/REP helicase N-terminal domain JCP76_07690 PF13361 UvrD-like helicase C-terminal domain JCP76_07695 PF00654 Voltage gated chloride channel JCP76_07700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_07700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_07705 PF00294 pfkB family carbohydrate kinase JCP76_07710 PF00455 DeoR C terminal sensor domain JCP76_07710 PF08220 DeoR-like helix-turn-helix domain JCP76_07730 PF01926 50S ribosome-binding GTPase JCP76_07735 PF06689 ClpX C4-type zinc finger JCP76_07735 PF10431 C-terminal, D2-small domain, of ClpB protein JCP76_07735 PF07724 AAA domain (Cdc48 subfamily) JCP76_07740 PF05697 Bacterial trigger factor protein (TF) JCP76_07740 PF05698 Bacterial trigger factor protein (TF) C-terminus JCP76_07740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCP76_07750 PF06271 RDD family JCP76_07755 PF01343 Peptidase family S49 JCP76_07765 PF01380 SIS domain JCP76_07775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCP76_07775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCP76_07775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCP76_07775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCP76_07785 PF02457 DisA bacterial checkpoint controller nucleotide-binding JCP76_07790 PF12838 4Fe-4S dicluster domain JCP76_07790 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JCP76_07790 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JCP76_07790 PF10371 Domain of unknown function JCP76_07790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCP76_07790 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JCP76_07825 PF00872 Transposase, Mutator family JCP76_07845 PF10298 WhiA N-terminal LAGLIDADG-like domain JCP76_07845 PF14527 WhiA LAGLIDADG-like domain JCP76_07845 PF02650 WhiA C-terminal HTH domain JCP76_07850 PF01933 Uncharacterised protein family UPF0052 JCP76_07855 PF03668 P-loop ATPase protein family JCP76_07860 PF01177 Asp/Glu/Hydantoin racemase JCP76_07870 PF17760 UvrA interaction domain JCP76_07870 PF17755 UvrA DNA-binding domain JCP76_07870 PF00005 ABC transporter JCP76_07875 PF02151 UvrB/uvrC motif JCP76_07875 PF12344 Ultra-violet resistance protein B JCP76_07875 PF04851 Type III restriction enzyme, res subunit JCP76_07875 PF17757 UvrB interaction domain JCP76_07875 PF00271 Helicase conserved C-terminal domain JCP76_07880 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_07885 PF00005 ABC transporter JCP76_07890 PF00226 DnaJ domain JCP76_07890 PF01556 DnaJ C terminal domain JCP76_07890 PF00684 DnaJ central domain JCP76_07895 PF00012 Hsp70 protein JCP76_07900 PF01025 GrpE JCP76_07905 PF01628 HrcA protein C terminal domain JCP76_07910 PF06969 HemN C-terminal domain JCP76_07910 PF04055 Radical SAM superfamily JCP76_07920 PF13683 Integrase core domain JCP76_07920 PF01610 Transposase JCP76_07955 PF01965 DJ-1/PfpI family JCP76_07965 PF02016 LD-carboxypeptidase N-terminal domain JCP76_07965 PF17676 LD-carboxypeptidase C-terminal domain JCP76_07975 PF08818 Domain of unknown function (DU1801) JCP76_07980 PF12728 Helix-turn-helix domain JCP76_07985 PF06800 Sugar transport protein JCP76_08000 PF06574 FAD synthetase JCP76_08000 PF01687 Riboflavin kinase JCP76_08005 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCP76_08005 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCP76_08010 PF09364 XFP N-terminal domain JCP76_08010 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JCP76_08010 PF09363 XFP C-terminal domain JCP76_08015 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_08020 PF02033 Ribosome-binding factor A JCP76_08025 PF04760 Translation initiation factor IF-2, N-terminal region JCP76_08025 PF11987 Translation-initiation factor 2 JCP76_08025 PF00009 Elongation factor Tu GTP binding domain JCP76_08030 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JCP76_08035 PF04296 Protein of unknown function (DUF448) JCP76_08040 PF00575 S1 RNA binding domain JCP76_08040 PF13184 NusA-like KH domain JCP76_08040 PF08529 NusA N-terminal domain JCP76_08045 PF17384 RimP C-terminal SH3 domain JCP76_08045 PF02576 RimP N-terminal domain JCP76_08050 PF02811 PHP domain JCP76_08050 PF00929 Exonuclease JCP76_08050 PF14579 Helix-hairpin-helix motif JCP76_08050 PF14480 DNA polymerase III polC-type N-terminus I JCP76_08050 PF11490 DNA polymerase III polC-type N-terminus II JCP76_08050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCP76_08050 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCP76_08055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCP76_08055 PF04073 Aminoacyl-tRNA editing domain JCP76_08055 PF03129 Anticodon binding domain JCP76_08060 PF02163 Peptidase family M50 JCP76_08060 PF17820 PDZ domain JCP76_08070 PF01255 Putative undecaprenyl diphosphate synthase JCP76_08080 PF01765 Ribosome recycling factor JCP76_08085 PF00696 Amino acid kinase family JCP76_08090 PF00889 Elongation factor TS JCP76_08095 PF00318 Ribosomal protein S2 JCP76_08100 PF01316 Arginine repressor, DNA binding domain JCP76_08100 PF02863 Arginine repressor, C-terminal domain JCP76_08105 PF00266 Aminotransferase class-V JCP76_08110 PF13419 Haloacid dehalogenase-like hydrolase JCP76_08115 PF13419 Haloacid dehalogenase-like hydrolase JCP76_08120 PF03485 Arginyl tRNA synthetase N terminal domain JCP76_08120 PF00750 tRNA synthetases class I (R) JCP76_08120 PF05746 DALR anticodon binding domain JCP76_08125 PF00696 Amino acid kinase family JCP76_08130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCP76_08130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCP76_08140 PF13545 Crp-like helix-turn-helix domain JCP76_08140 PF00027 Cyclic nucleotide-binding domain JCP76_08150 PF00814 Glycoprotease family JCP76_08155 PF00583 Acetyltransferase (GNAT) family JCP76_08160 PF00583 Acetyltransferase (GNAT) family JCP76_08165 PF00814 Glycoprotease family JCP76_08175 PF00356 Bacterial regulatory proteins, lacI family JCP76_08180 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JCP76_08180 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JCP76_08185 PF16363 GDP-mannose 4,6 dehydratase JCP76_08200 PF04343 Protein of unknown function, DUF488 JCP76_08205 PF00581 Rhodanese-like domain JCP76_08210 PF00480 ROK family JCP76_08225 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCP76_08230 PF01032 FecCD transport family JCP76_08235 PF01032 FecCD transport family JCP76_08240 PF00005 ABC transporter JCP76_08250 PF00186 Dihydrofolate reductase JCP76_08255 PF00471 Ribosomal protein L33 JCP76_08260 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JCP76_08265 PF00733 Asparagine synthase JCP76_08265 PF13537 Glutamine amidotransferase domain JCP76_08270 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JCP76_08280 PF08359 YsiA-like protein, C-terminal region JCP76_08280 PF00440 Bacterial regulatory proteins, tetR family JCP76_08300 PF02627 Carboxymuconolactone decarboxylase family JCP76_08315 PF03009 Glycerophosphoryl diester phosphodiesterase family JCP76_08345 PF00342 Phosphoglucose isomerase JCP76_08350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCP76_08350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCP76_08360 PF04073 Aminoacyl-tRNA editing domain JCP76_08365 PF01487 Type I 3-dehydroquinase JCP76_08370 PF10672 S-adenosylmethionine-dependent methyltransferase JCP76_08370 PF17785 PUA-like domain JCP76_08375 PF00884 Sulfatase JCP76_08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_08390 PF00672 HAMP domain JCP76_08390 PF00512 His Kinase A (phospho-acceptor) domain JCP76_08395 PF00072 Response regulator receiver domain JCP76_08395 PF00486 Transcriptional regulatory protein, C terminal JCP76_08420 PF00872 Transposase, Mutator family JCP76_08435 PF00872 Transposase, Mutator family JCP76_08450 PF13185 GAF domain JCP76_08455 PF03306 Alpha-acetolactate decarboxylase JCP76_08460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCP76_08460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCP76_08460 PF00205 Thiamine pyrophosphate enzyme, central domain JCP76_08470 PF00872 Transposase, Mutator family JCP76_08480 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP76_08490 PF03466 LysR substrate binding domain JCP76_08495 PF13411 MerR HTH family regulatory protein JCP76_08500 PF07690 Major Facilitator Superfamily JCP76_08555 PF02899 Phage integrase, N-terminal SAM-like domain JCP76_08555 PF00589 Phage integrase family JCP76_08580 PF03050 Transposase IS66 family JCP76_08580 PF13817 IS66 C-terminal element JCP76_08580 PF13007 Transposase C of IS166 homeodomain JCP76_08580 PF13005 zinc-finger binding domain of transposase IS66 JCP76_08600 PF08244 Glycosyl hydrolases family 32 C terminal JCP76_08600 PF00251 Glycosyl hydrolases family 32 N-terminal domain JCP76_08610 PF03830 PTS system sorbose subfamily IIB component JCP76_08610 PF03610 PTS system fructose IIA component JCP76_08615 PF03613 PTS system mannose/fructose/sorbose family IID component JCP76_08620 PF03609 PTS system sorbose-specific iic component JCP76_08625 PF03610 PTS system fructose IIA component JCP76_08625 PF00158 Sigma-54 interaction domain JCP76_08625 PF00874 PRD domain JCP76_08630 PF00480 ROK family JCP76_08635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_08640 PF02378 Phosphotransferase system, EIIC JCP76_08640 PF00367 phosphotransferase system, EIIB JCP76_08650 PF00356 Bacterial regulatory proteins, lacI family JCP76_08660 PF12802 MarR family JCP76_08675 PF01609 Transposase DDE domain JCP76_08685 PF01695 IstB-like ATP binding protein JCP76_08695 PF00877 NlpC/P60 family JCP76_08710 PF00872 Transposase, Mutator family JCP76_08745 PF01348 Type II intron maturase JCP76_08745 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP76_08755 PF02486 Replication initiation factor JCP76_08755 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP76_08765 PF00145 C-5 cytosine-specific DNA methylase JCP76_08800 PF01245 Ribosomal protein L19 JCP76_08805 PF01746 tRNA (Guanine-1)-methyltransferase JCP76_08810 PF05239 PRC-barrel domain JCP76_08810 PF01782 RimM N-terminal domain JCP76_08825 PF00886 Ribosomal protein S16 JCP76_08830 PF03358 NADPH-dependent FMN reductase JCP76_08835 PF01872 RibD C-terminal domain JCP76_08840 PF13673 Acetyltransferase (GNAT) domain JCP76_08840 PF03352 Methyladenine glycosylase JCP76_08840 PF00117 Glutamine amidotransferase class-I JCP76_08840 PF13302 Acetyltransferase (GNAT) domain JCP76_08840 PF00958 GMP synthase C terminal domain JCP76_08845 PF00448 SRP54-type protein, GTPase domain JCP76_08845 PF02881 SRP54-type protein, helical bundle domain JCP76_08845 PF02978 Signal peptide binding domain JCP76_08850 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JCP76_08860 PF00072 Response regulator receiver domain JCP76_08860 PF00486 Transcriptional regulatory protein, C terminal JCP76_08865 PF00989 PAS fold JCP76_08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_08865 PF16736 Single Cache-like JCP76_08865 PF00512 His Kinase A (phospho-acceptor) domain JCP76_08875 PF13683 Integrase core domain JCP76_08875 PF01610 Transposase JCP76_08880 PF12849 PBP superfamily domain JCP76_08905 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JCP76_08925 PF00872 Transposase, Mutator family JCP76_08965 PF17863 AAA lid domain JCP76_08965 PF07726 ATPase family associated with various cellular activities (AAA) JCP76_08990 PF00403 Heavy-metal-associated domain JCP76_08995 PF00403 Heavy-metal-associated domain JCP76_09000 PF03965 Penicillinase repressor JCP76_09010 PF13520 Amino acid permease JCP76_09015 PF00403 Heavy-metal-associated domain JCP76_09030 PF13472 GDSL-like Lipase/Acylhydrolase family JCP76_09035 PF00152 tRNA synthetases class II (D, K and N) JCP76_09035 PF01336 OB-fold nucleic acid binding domain JCP76_09040 PF00155 Aminotransferase class I and II JCP76_09050 PF13307 Helicase C-terminal domain JCP76_09050 PF04851 Type III restriction enzyme, res subunit JCP76_09050 PF00929 Exonuclease JCP76_09055 PF00313 'Cold-shock' DNA-binding domain JCP76_09075 PF07943 Penicillin-binding protein 5, C-terminal domain JCP76_09075 PF00768 D-alanyl-D-alanine carboxypeptidase JCP76_09085 PF00654 Voltage gated chloride channel JCP76_09100 PF00588 SpoU rRNA Methylase family JCP76_09100 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCP76_09105 PF00708 Acylphosphatase JCP76_09110 PF02096 60Kd inner membrane protein JCP76_09115 PF01791 DeoC/LacD family aldolase JCP76_09120 PF13817 IS66 C-terminal element JCP76_09120 PF13007 Transposase C of IS166 homeodomain JCP76_09120 PF13005 zinc-finger binding domain of transposase IS66 JCP76_09120 PF03050 Transposase IS66 family JCP76_09160 PF13439 Glycosyltransferase Family 4 JCP76_09160 PF00534 Glycosyl transferases group 1 JCP76_09180 PF00535 Glycosyl transferase family 2 JCP76_09185 PF13439 Glycosyltransferase Family 4 JCP76_09185 PF00534 Glycosyl transferases group 1 JCP76_09200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCP76_09200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCP76_09200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCP76_09205 PF02397 Bacterial sugar transferase JCP76_09215 PF13614 AAA domain JCP76_09220 PF13807 G-rich domain on putative tyrosine kinase JCP76_09220 PF02706 Chain length determinant protein JCP76_09225 PF03816 Cell envelope-related transcriptional attenuator domain JCP76_09235 PF02092 Glycyl-tRNA synthetase beta subunit JCP76_09235 PF05746 DALR anticodon binding domain JCP76_09240 PF02091 Glycyl-tRNA synthetase alpha subunit JCP76_09245 PF11967 Recombination protein O N terminal JCP76_09245 PF02565 Recombination protein O C terminal JCP76_09250 PF07650 KH domain JCP76_09250 PF01926 50S ribosome-binding GTPase JCP76_09255 PF01219 Prokaryotic diacylglycerol kinase JCP76_09260 PF02130 Uncharacterized protein family UPF0054 JCP76_09265 PF07698 7TM receptor with intracellular HD hydrolase JCP76_09265 PF01966 HD domain JCP76_09265 PF07697 7TM-HD extracellular JCP76_09270 PF02562 PhoH-like protein JCP76_09275 PF05525 Branched-chain amino acid transport protein JCP76_09280 PF09424 Yqey-like protein JCP76_09285 PF01165 Ribosomal protein S21 JCP76_09290 PF01475 Ferric uptake regulator family JCP76_09295 PF03618 Kinase/pyrophosphorylase JCP76_09300 PF01022 Bacterial regulatory protein, arsR family JCP76_09305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCP76_09305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCP76_09305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCP76_09305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCP76_09310 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_09315 PF00232 Glycosyl hydrolase family 1 JCP76_09320 PF02056 Family 4 glycosyl hydrolase JCP76_09320 PF11975 Family 4 glycosyl hydrolase C-terminal domain JCP76_09325 PF01418 Helix-turn-helix domain, rpiR family JCP76_09325 PF01380 SIS domain JCP76_09330 PF00367 phosphotransferase system, EIIB JCP76_09330 PF02378 Phosphotransferase system, EIIC JCP76_09330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_09340 PF00005 ABC transporter JCP76_09340 PF00664 ABC transporter transmembrane region JCP76_09345 PF00005 ABC transporter JCP76_09345 PF00664 ABC transporter transmembrane region JCP76_09350 PF03672 Uncharacterised protein family (UPF0154) JCP76_09355 PF01566 Natural resistance-associated macrophage protein JCP76_09365 PF01261 Xylose isomerase-like TIM barrel JCP76_09370 PF00912 Transglycosylase JCP76_09370 PF00905 Penicillin binding protein transpeptidase domain JCP76_09375 PF00872 Transposase, Mutator family JCP76_09410 PF00356 Bacterial regulatory proteins, lacI family JCP76_09415 PF00557 Metallopeptidase family M24 JCP76_09415 PF01321 Creatinase/Prolidase N-terminal domain JCP76_09420 PF12732 YtxH-like protein JCP76_09430 PF00483 Nucleotidyl transferase JCP76_09435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCP76_09435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCP76_09440 PF01790 Prolipoprotein diacylglyceryl transferase JCP76_09445 PF07475 HPr Serine kinase C-terminal domain JCP76_09445 PF02603 HPr Serine kinase N terminus JCP76_09450 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JCP76_09475 PF01895 PhoU domain JCP76_09480 PF00005 ABC transporter JCP76_09485 PF00005 ABC transporter JCP76_09490 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_09495 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_09500 PF12849 PBP superfamily domain JCP76_09505 PF13091 PLD-like domain JCP76_09505 PF13396 Phospholipase_D-nuclease N-terminal JCP76_09510 PF02687 FtsX-like permease family JCP76_09510 PF18075 FtsX extracellular domain JCP76_09515 PF00005 ABC transporter JCP76_09525 PF07516 SecA Wing and Scaffold domain JCP76_09525 PF01043 SecA preprotein cross-linking domain JCP76_09525 PF02810 SEC-C motif JCP76_09525 PF07517 SecA DEAD-like domain JCP76_09530 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JCP76_09530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCP76_09540 PF04851 Type III restriction enzyme, res subunit JCP76_09540 PF00271 Helicase conserved C-terminal domain JCP76_09545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_09555 PF01205 Uncharacterized protein family UPF0029 JCP76_09555 PF09186 Domain of unknown function (DUF1949) JCP76_09560 PF00392 Bacterial regulatory proteins, gntR family JCP76_09560 PF07702 UTRA domain JCP76_09585 PF00480 ROK family JCP76_09595 PF01809 Putative membrane protein insertion efficiency factor JCP76_09605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCP76_09620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCP76_09620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JCP76_09625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP76_09625 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP76_09630 PF00231 ATP synthase JCP76_09635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP76_09635 PF00306 ATP synthase alpha/beta chain, C terminal domain JCP76_09635 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP76_09640 PF00213 ATP synthase delta (OSCP) subunit JCP76_09645 PF00430 ATP synthase B/B' CF(0) JCP76_09650 PF00137 ATP synthase subunit C JCP76_09655 PF00119 ATP synthase A chain JCP76_09665 PF12146 Serine aminopeptidase, S33 JCP76_09670 PF03840 Preprotein translocase SecG subunit JCP76_09675 PF14542 GCN5-related N-acetyl-transferase JCP76_09685 PF01156 Inosine-uridine preferring nucleoside hydrolase JCP76_09695 PF07687 Peptidase dimerisation domain JCP76_09695 PF01546 Peptidase family M20/M25/M40 JCP76_09700 PF03952 Enolase, N-terminal domain JCP76_09700 PF00113 Enolase, C-terminal TIM barrel domain JCP76_09705 PF00121 Triosephosphate isomerase JCP76_09710 PF00162 Phosphoglycerate kinase JCP76_09715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCP76_09715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCP76_09720 PF04198 Putative sugar-binding domain JCP76_09725 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCP76_09725 PF04552 Sigma-54, DNA binding domain JCP76_09725 PF04963 Sigma-54 factor, core binding domain JCP76_09735 PF01522 Polysaccharide deacetylase JCP76_09740 PF13739 Deacetylase PdaC JCP76_09740 PF11738 Protein of unknown function (DUF3298) JCP76_09745 PF04542 Sigma-70 region 2 JCP76_09745 PF08281 Sigma-70, region 4 JCP76_09750 PF05066 HB1, ASXL, restriction endonuclease HTH domain JCP76_09760 PF03099 Biotin/lipoate A/B protein ligase family JCP76_09765 PF01966 HD domain JCP76_09775 PF00293 NUDIX domain JCP76_09780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCP76_09785 PF02567 Phenazine biosynthesis-like protein JCP76_09790 PF02423 Ornithine cyclodeaminase/mu-crystallin family JCP76_09795 PF00392 Bacterial regulatory proteins, gntR family JCP76_09795 PF00155 Aminotransferase class I and II JCP76_09800 PF02386 Cation transport protein JCP76_09805 PF01813 ATP synthase subunit D JCP76_09810 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP76_09810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP76_09815 PF16886 ATPsynthase alpha/beta subunit N-term extension JCP76_09815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP76_09815 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP76_09820 PF01990 ATP synthase (F/14-kDa) subunit JCP76_09825 PF01992 ATP synthase (C/AC39) subunit JCP76_09835 PF00137 ATP synthase subunit C JCP76_09840 PF01496 V-type ATPase 116kDa subunit family JCP76_09850 PF07722 Peptidase C26 JCP76_09855 PF06874 Firmicute fructose-1,6-bisphosphatase JCP76_09865 PF00005 ABC transporter JCP76_09865 PF13732 Domain of unknown function (DUF4162) JCP76_09870 PF01541 GIY-YIG catalytic domain JCP76_09870 PF08459 UvrC Helix-hairpin-helix N-terminal JCP76_09870 PF02151 UvrB/uvrC motif JCP76_09880 PF00085 Thioredoxin JCP76_09885 PF01713 Smr domain JCP76_09885 PF00488 MutS domain V JCP76_09900 PF11858 Domain of unknown function (DUF3378) JCP76_09900 PF01351 Ribonuclease HII JCP76_09905 PF01520 N-acetylmuramoyl-L-alanine amidase JCP76_09905 PF00395 S-layer homology domain JCP76_09910 PF00440 Bacterial regulatory proteins, tetR family JCP76_09915 PF00005 ABC transporter JCP76_09925 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_09925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_09955 PF01070 FMN-dependent dehydrogenase JCP76_09965 PF03949 Malic enzyme, NAD binding domain JCP76_09965 PF00390 Malic enzyme, N-terminal domain JCP76_09970 PF03390 2-hydroxycarboxylate transporter family JCP76_10005 PF04860 Phage portal protein JCP76_10085 PF02899 Phage integrase, N-terminal SAM-like domain JCP76_10085 PF00589 Phage integrase family JCP76_10090 PF06949 Protein of unknown function (DUF1292) JCP76_10095 PF03652 Holliday junction resolvase JCP76_10100 PF06135 IreB regulatory phosphoprotein JCP76_10130 PF00005 ABC transporter JCP76_10140 PF09323 Domain of unknown function (DUF1980) JCP76_10145 PF03773 Predicted permease JCP76_10150 PF00085 Thioredoxin JCP76_10155 PF02629 CoA binding domain JCP76_10155 PF06971 Putative DNA-binding protein N-terminus JCP76_10160 PF12848 ABC transporter JCP76_10160 PF00005 ABC transporter JCP76_10160 PF16326 ABC transporter C-terminal domain JCP76_10165 PF07470 Glycosyl Hydrolase Family 88 JCP76_10175 PF07470 Glycosyl Hydrolase Family 88 JCP76_10180 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_10185 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_10200 PF07883 Cupin domain JCP76_10200 PF12833 Helix-turn-helix domain JCP76_10205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_10205 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_10220 PF13167 GTP-binding GTPase N-terminal JCP76_10220 PF16360 GTP-binding GTPase Middle Region JCP76_10220 PF01926 50S ribosome-binding GTPase JCP76_10230 PF03009 Glycerophosphoryl diester phosphodiesterase family JCP76_10240 PF00574 Clp protease JCP76_10245 PF00132 Bacterial transferase hexapeptide (six repeats) JCP76_10255 PF00005 ABC transporter JCP76_10255 PF00664 ABC transporter transmembrane region JCP76_10260 PF00664 ABC transporter transmembrane region JCP76_10260 PF00005 ABC transporter JCP76_10265 PF07288 Protein of unknown function (DUF1447) JCP76_10270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCP76_10270 PF00753 Metallo-beta-lactamase superfamily JCP76_10270 PF17770 Ribonuclease J C-terminal domain JCP76_10280 PF00313 'Cold-shock' DNA-binding domain JCP76_10315 PF00872 Transposase, Mutator family JCP76_10370 PF01551 Peptidase family M23 JCP76_10370 PF10145 Phage-related minor tail protein JCP76_10370 PF01464 Transglycosylase SLT domain JCP76_10515 PF11638 DnaA N-terminal domain JCP76_10515 PF00308 Bacterial dnaA protein JCP76_10515 PF08299 Bacterial dnaA protein helix-turn-helix JCP76_10525 PF03837 RecT family JCP76_10530 PF09588 YqaJ-like viral recombinase domain JCP76_10570 PF01381 Helix-turn-helix JCP76_10580 PF07508 Recombinase JCP76_10580 PF00239 Resolvase, N terminal domain JCP76_10580 PF13408 Recombinase zinc beta ribbon domain JCP76_10585 PF04002 RadC-like JAB domain JCP76_10590 PF13419 Haloacid dehalogenase-like hydrolase JCP76_10595 PF08245 Mur ligase middle domain JCP76_10595 PF02875 Mur ligase family, glutamate ligase domain JCP76_10600 PF00133 tRNA synthetases class I (I, L, M and V) JCP76_10600 PF08264 Anticodon-binding domain of tRNA JCP76_10600 PF10458 Valyl tRNA synthetase tRNA binding arm JCP76_10605 PF06971 Putative DNA-binding protein N-terminus JCP76_10605 PF02629 CoA binding domain JCP76_10610 PF02926 THUMP domain JCP76_10610 PF02568 Thiamine biosynthesis protein (ThiI) JCP76_10615 PF00266 Aminotransferase class-V JCP76_10625 PF06160 Septation ring formation regulator, EzrA JCP76_10640 PF01904 Protein of unknown function DUF72 JCP76_10645 PF00710 Asparaginase, N-terminal JCP76_10645 PF17763 Glutaminase/Asparaginase C-terminal domain JCP76_10655 PF03881 Fructosamine kinase JCP76_10660 PF03051 Peptidase C1-like family JCP76_10710 PF13005 zinc-finger binding domain of transposase IS66 JCP76_10710 PF03050 Transposase IS66 family JCP76_10710 PF13817 IS66 C-terminal element JCP76_10710 PF13007 Transposase C of IS166 homeodomain JCP76_10740 PF00575 S1 RNA binding domain JCP76_10745 PF00155 Aminotransferase class I and II JCP76_10750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCP76_10760 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_10765 PF04608 Phosphatidylglycerophosphatase A JCP76_10775 PF13344 Haloacid dehalogenase-like hydrolase JCP76_10780 PF06265 Protein of unknown function (DUF1027) JCP76_10785 PF02872 5'-nucleotidase, C-terminal domain JCP76_10795 PF14437 MafB19-like deaminase JCP76_10800 PF13556 PucR C-terminal helix-turn-helix domain JCP76_10810 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JCP76_10810 PF17126 RsmF rRNA methyltransferase first C-terminal domain JCP76_10810 PF01189 16S rRNA methyltransferase RsmB/F JCP76_10825 PF04298 Putative neutral zinc metallopeptidase JCP76_10830 PF08274 PhnA Zinc-Ribbon JCP76_10830 PF03831 PhnA domain JCP76_10835 PF02272 DHHA1 domain JCP76_10835 PF01368 DHH family JCP76_10840 PF00571 CBS domain JCP76_10840 PF03061 Thioesterase superfamily JCP76_10840 PF07085 DRTGG domain JCP76_10840 PF00392 Bacterial regulatory proteins, gntR family JCP76_10845 PF12706 Beta-lactamase superfamily domain JCP76_10860 PF00753 Metallo-beta-lactamase superfamily JCP76_10860 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCP76_10860 PF17770 Ribonuclease J C-terminal domain JCP76_10865 PF12704 MacB-like periplasmic core domain JCP76_10865 PF02687 FtsX-like permease family JCP76_10870 PF00005 ABC transporter JCP76_10880 PF01979 Amidohydrolase family JCP76_10885 PF03606 C4-dicarboxylate anaerobic carrier JCP76_10890 PF13580 SIS domain JCP76_10900 PF00483 Nucleotidyl transferase JCP76_10910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCP76_10910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCP76_10915 PF13580 SIS domain JCP76_10920 PF01380 SIS domain JCP76_10925 PF03613 PTS system mannose/fructose/sorbose family IID component JCP76_10930 PF03609 PTS system sorbose-specific iic component JCP76_10935 PF03830 PTS system sorbose subfamily IIB component JCP76_10945 PF00874 PRD domain JCP76_10945 PF00158 Sigma-54 interaction domain JCP76_10955 PF00664 ABC transporter transmembrane region JCP76_10955 PF00005 ABC transporter JCP76_10960 PF00664 ABC transporter transmembrane region JCP76_10960 PF00005 ABC transporter JCP76_10970 PF02142 MGS-like domain JCP76_10975 PF03459 TOBE domain JCP76_10975 PF00005 ABC transporter JCP76_10975 PF17912 MalK OB fold domain JCP76_10985 PF00398 Ribosomal RNA adenine dimethylase JCP76_10990 PF01751 Toprim domain JCP76_10990 PF13331 Domain of unknown function (DUF4093) JCP76_10995 PF01026 TatD related DNase JCP76_11000 PF13520 Amino acid permease JCP76_11010 PF08264 Anticodon-binding domain of tRNA JCP76_11010 PF09334 tRNA synthetases class I (M) JCP76_11010 PF01588 Putative tRNA binding domain JCP76_11025 PF12323 Helix-turn-helix domain JCP76_11025 PF07282 Putative transposase DNA-binding domain JCP76_11025 PF01385 Probable transposase JCP76_11030 PF00005 ABC transporter JCP76_11030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP76_11035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP76_11035 PF00005 ABC transporter JCP76_11040 PF12911 N-terminal TM domain of oligopeptide transport permease C JCP76_11040 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_11045 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_11055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCP76_11060 PF00583 Acetyltransferase (GNAT) family JCP76_11070 PF04055 Radical SAM superfamily JCP76_11075 PF09397 Ftsk gamma domain JCP76_11075 PF17854 FtsK alpha domain JCP76_11075 PF01580 FtsK/SpoIIIE family JCP76_11080 PF00232 Glycosyl hydrolase family 1 JCP76_11085 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCP76_11090 PF00005 ABC transporter JCP76_11095 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_11105 PF05738 Cna protein B-type domain JCP76_11105 PF05737 Collagen binding domain JCP76_11105 PF17802 Prealbumin-like fold domain JCP76_11110 PF00872 Transposase, Mutator family JCP76_11145 PF07859 alpha/beta hydrolase fold JCP76_11150 PF00464 Serine hydroxymethyltransferase JCP76_11155 PF01300 Telomere recombination JCP76_11155 PF03481 Putative GTP-binding controlling metal-binding JCP76_11165 PF05175 Methyltransferase small domain JCP76_11165 PF17827 PrmC N-terminal domain JCP76_11170 PF00472 RF-1 domain JCP76_11170 PF03462 PCRF domain JCP76_11175 PF00265 Thymidine kinase JCP76_11185 PF01209 ubiE/COQ5 methyltransferase family JCP76_11190 PF10502 Signal peptidase, peptidase S26 JCP76_11205 PF02677 Epoxyqueuosine reductase QueH JCP76_11210 PF02386 Cation transport protein JCP76_11215 PF08353 Domain of unknown function (DUF1727) JCP76_11215 PF08245 Mur ligase middle domain JCP76_11220 PF07685 CobB/CobQ-like glutamine amidotransferase domain JCP76_11225 PF01232 Mannitol dehydrogenase Rossmann domain JCP76_11225 PF08125 Mannitol dehydrogenase C-terminal domain JCP76_11230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_11235 PF02378 Phosphotransferase system, EIIC JCP76_11235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_11240 PF00005 ABC transporter JCP76_11250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_11255 PF08279 HTH domain JCP76_11255 PF05043 Mga helix-turn-helix domain JCP76_11255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_11260 PF02378 Phosphotransferase system, EIIC JCP76_11260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_11265 PF01238 Phosphomannose isomerase type I JCP76_11270 PF00144 Beta-lactamase JCP76_11280 PF00664 ABC transporter transmembrane region JCP76_11280 PF00005 ABC transporter JCP76_11285 PF00005 ABC transporter JCP76_11285 PF00664 ABC transporter transmembrane region JCP76_11300 PF02525 Flavodoxin-like fold JCP76_11310 PF01594 AI-2E family transporter JCP76_11320 PF10282 Lactonase, 7-bladed beta-propeller JCP76_11335 PF00884 Sulfatase JCP76_11345 PF02610 L-arabinose isomerase JCP76_11345 PF11762 L-arabinose isomerase C-terminal domain JCP76_11350 PF00596 Class II Aldolase and Adducin N-terminal domain JCP76_11360 PF00083 Sugar (and other) transporter JCP76_11365 PF00392 Bacterial regulatory proteins, gntR family JCP76_11370 PF04616 Glycosyl hydrolases family 43 JCP76_11370 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JCP76_11375 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JCP76_11385 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_11390 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_11400 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JCP76_11410 PF02540 NAD synthase JCP76_11415 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCP76_11415 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCP76_11415 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JCP76_11425 PF07739 TipAS antibiotic-recognition domain JCP76_11425 PF13411 MerR HTH family regulatory protein JCP76_11430 PF00356 Bacterial regulatory proteins, lacI family JCP76_11430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP76_11440 PF00872 Transposase, Mutator family JCP76_11460 PF00118 TCP-1/cpn60 chaperonin family JCP76_11465 PF00166 Chaperonin 10 Kd subunit JCP76_11475 PF02378 Phosphotransferase system, EIIC JCP76_11480 PF13460 NAD(P)H-binding JCP76_11485 PF00753 Metallo-beta-lactamase superfamily JCP76_11500 PF13426 PAS domain JCP76_11500 PF00512 His Kinase A (phospho-acceptor) domain JCP76_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_11500 PF00672 HAMP domain JCP76_11505 PF00072 Response regulator receiver domain JCP76_11505 PF00486 Transcriptional regulatory protein, C terminal JCP76_11510 PF02645 Uncharacterised protein, DegV family COG1307 JCP76_11540 PF01721 Class II bacteriocin JCP76_11545 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_11550 PF00571 CBS domain JCP76_11550 PF00005 ABC transporter JCP76_11555 PF07729 FCD domain JCP76_11555 PF00392 Bacterial regulatory proteins, gntR family JCP76_11565 PF02421 Ferrous iron transport protein B JCP76_11565 PF07664 Ferrous iron transport protein B C terminus JCP76_11565 PF17910 FeoB cytosolic helical domain JCP76_11565 PF07670 Nucleoside recognition JCP76_11575 PF00462 Glutaredoxin JCP76_11580 PF02867 Ribonucleotide reductase, barrel domain JCP76_11580 PF00317 Ribonucleotide reductase, all-alpha domain JCP76_11580 PF08343 Ribonucleotide reductase N-terminal JCP76_11585 PF00268 Ribonucleotide reductase, small chain JCP76_11590 PF01594 AI-2E family transporter JCP76_11595 PF02308 MgtC family JCP76_11600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JCP76_11605 PF00005 ABC transporter JCP76_11605 PF12848 ABC transporter JCP76_11620 PF07690 Major Facilitator Superfamily JCP76_11630 PF00542 Ribosomal protein L7/L12 C-terminal domain JCP76_11630 PF16320 Ribosomal protein L7/L12 dimerisation domain JCP76_11635 PF00466 Ribosomal protein L10 JCP76_11640 PF00687 Ribosomal protein L1p/L10e family JCP76_11645 PF00298 Ribosomal protein L11, RNA binding domain JCP76_11645 PF03946 Ribosomal protein L11, N-terminal domain JCP76_11650 PF01842 ACT domain JCP76_11650 PF03315 Serine dehydratase beta chain JCP76_11655 PF03313 Serine dehydratase alpha chain JCP76_11660 PF01070 FMN-dependent dehydrogenase JCP76_11665 PF00561 alpha/beta hydrolase fold JCP76_11670 PF02357 Transcription termination factor nusG JCP76_11670 PF00467 KOW motif JCP76_11675 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCP76_11680 PF00471 Ribosomal protein L33 JCP76_11695 PF00781 Diacylglycerol kinase catalytic domain JCP76_11710 PF00005 ABC transporter JCP76_11715 PF07730 Histidine kinase JCP76_11720 PF00072 Response regulator receiver domain JCP76_11720 PF00196 Bacterial regulatory proteins, luxR family JCP76_11730 PF14490 Helix-hairpin-helix containing domain JCP76_11730 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JCP76_11730 PF13538 UvrD-like helicase C-terminal domain JCP76_11740 PF00588 SpoU rRNA Methylase family JCP76_11745 PF01209 ubiE/COQ5 methyltransferase family JCP76_11750 PF03932 CutC family JCP76_11755 PF01769 Divalent cation transporter JCP76_11755 PF00571 CBS domain JCP76_11755 PF03448 MgtE intracellular N domain JCP76_11760 PF00849 RNA pseudouridylate synthase JCP76_11765 PF01513 ATP-NAD kinase JCP76_11770 PF04607 Region found in RelA / SpoT proteins JCP76_11775 PF01928 CYTH domain JCP76_11785 PF13683 Integrase core domain JCP76_11785 PF01610 Transposase JCP76_11790 PF01432 Peptidase family M3 JCP76_11790 PF08439 Oligopeptidase F JCP76_11800 PF05389 Negative regulator of genetic competence (MecA) JCP76_11805 PF03960 ArsC family JCP76_11815 PF00271 Helicase conserved C-terminal domain JCP76_11815 PF00176 SNF2 family N-terminal domain JCP76_11815 PF04434 SWIM zinc finger JCP76_11820 PF13476 AAA domain JCP76_11825 PF12320 Type 5 capsule protein repressor C-terminal domain JCP76_11825 PF00149 Calcineurin-like phosphoesterase JCP76_11830 PF01553 Acyltransferase JCP76_11835 PF05175 Methyltransferase small domain JCP76_11840 PF01541 GIY-YIG catalytic domain JCP76_11845 PF01757 Acyltransferase family JCP76_11850 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP76_11850 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP76_11855 PF01336 OB-fold nucleic acid binding domain JCP76_11855 PF00152 tRNA synthetases class II (D, K and N) JCP76_11855 PF02938 GAD domain JCP76_11860 PF03129 Anticodon binding domain JCP76_11860 PF13393 Histidyl-tRNA synthetase JCP76_11865 PF00248 Aldo/keto reductase family JCP76_11870 PF00067 Cytochrome P450 JCP76_11875 PF02580 D-Tyr-tRNA(Tyr) deacylase JCP76_11880 PF02824 TGS domain JCP76_11880 PF04607 Region found in RelA / SpoT proteins JCP76_11880 PF13291 ACT domain JCP76_11885 PF04452 RNA methyltransferase JCP76_11900 PF02245 Methylpurine-DNA glycosylase (MPG) JCP76_11905 PF12002 MgsA AAA+ ATPase C terminal JCP76_11905 PF16193 AAA C-terminal domain JCP76_11905 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCP76_11920 PF00582 Universal stress protein family JCP76_11930 PF12848 ABC transporter JCP76_11930 PF00005 ABC transporter JCP76_11930 PF16326 ABC transporter C-terminal domain JCP76_11935 PF00871 Acetokinase family JCP76_11940 PF02384 N-6 DNA Methylase JCP76_11965 PF07963 Prokaryotic N-terminal methylation motif JCP76_11970 PF00482 Type II secretion system (T2SS), protein F JCP76_11975 PF00437 Type II/IV secretion system protein JCP76_11980 PF01979 Amidohydrolase family JCP76_11980 PF13382 Adenine deaminase C-terminal domain JCP76_11985 PF02390 Putative methyltransferase JCP76_11995 PF05975 Bacterial ABC transporter protein EcsB JCP76_12000 PF00005 ABC transporter JCP76_12005 PF01230 HIT domain JCP76_12015 PF13145 PPIC-type PPIASE domain JCP76_12020 PF01966 HD domain JCP76_12020 PF01336 OB-fold nucleic acid binding domain JCP76_12025 PF13514 AAA domain JCP76_12030 PF00149 Calcineurin-like phosphoesterase JCP76_12065 PF04616 Glycosyl hydrolases family 43 JCP76_12065 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JCP76_12080 PF01738 Dienelactone hydrolase family JCP76_12085 PF00295 Glycosyl hydrolases family 28 JCP76_12090 PF07470 Glycosyl Hydrolase Family 88 JCP76_12095 PF13416 Bacterial extracellular solute-binding protein JCP76_12105 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_12110 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_12115 PF17853 GGDEF-like domain JCP76_12115 PF12833 Helix-turn-helix domain JCP76_12120 PF00356 Bacterial regulatory proteins, lacI family JCP76_12125 PF08125 Mannitol dehydrogenase C-terminal domain JCP76_12125 PF01232 Mannitol dehydrogenase Rossmann domain JCP76_12130 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JCP76_12130 PF08666 SAF domain JCP76_12135 PF02614 Glucuronate isomerase JCP76_12140 PF00657 GDSL-like Lipase/Acylhydrolase JCP76_12150 PF00005 ABC transporter JCP76_12150 PF00664 ABC transporter transmembrane region JCP76_12155 PF06133 Control of competence regulator ComK, YlbF/YmcA JCP76_12160 PF00912 Transglycosylase JCP76_12160 PF00905 Penicillin binding protein transpeptidase domain JCP76_12165 PF00849 RNA pseudouridylate synthase JCP76_12165 PF01479 S4 domain JCP76_12170 PF00480 ROK family JCP76_12175 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain JCP76_12175 PF07748 Glycosyl hydrolases family 38 C-terminal domain JCP76_12175 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 JCP76_12175 PF01074 Glycosyl hydrolases family 38 N-terminal domain JCP76_12175 PF09261 Alpha mannosidase middle domain JCP76_12185 PF00392 Bacterial regulatory proteins, gntR family JCP76_12195 PF12833 Helix-turn-helix domain JCP76_12195 PF00072 Response regulator receiver domain JCP76_12200 PF06580 Histidine kinase JCP76_12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_12200 PF00672 HAMP domain JCP76_12200 PF02743 Cache domain JCP76_12210 PF12010 Domain of unknown function (DUF3502) JCP76_12215 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_12220 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_12225 PF00849 RNA pseudouridylate synthase JCP76_12225 PF01479 S4 domain JCP76_12230 PF01943 Polysaccharide biosynthesis protein JCP76_12230 PF14667 Polysaccharide biosynthesis C-terminal domain JCP76_12240 PF08245 Mur ligase middle domain JCP76_12240 PF02875 Mur ligase family, glutamate ligase domain JCP76_12245 PF02378 Phosphotransferase system, EIIC JCP76_12255 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP76_12260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP76_12260 PF00874 PRD domain JCP76_12260 PF08279 HTH domain JCP76_12260 PF05043 Mga helix-turn-helix domain JCP76_12265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP76_12305 PF06445 GyrI-like small molecule binding domain JCP76_12305 PF13411 MerR HTH family regulatory protein JCP76_12310 PF00005 ABC transporter JCP76_12310 PF00664 ABC transporter transmembrane region JCP76_12315 PF00005 ABC transporter JCP76_12315 PF00664 ABC transporter transmembrane region JCP76_12325 PF09334 tRNA synthetases class I (M) JCP76_12325 PF13603 Leucyl-tRNA synthetase, Domain 2 JCP76_12325 PF00133 tRNA synthetases class I (I, L, M and V) JCP76_12325 PF08264 Anticodon-binding domain of tRNA JCP76_12330 PF01476 LysM domain JCP76_12330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP76_12335 PF01569 PAP2 superfamily JCP76_12340 PF04055 Radical SAM superfamily JCP76_12340 PF16199 Radical_SAM C-terminal domain JCP76_12345 PF06962 Putative rRNA methylase JCP76_12355 PF00872 Transposase, Mutator family JCP76_12395 PF00589 Phage integrase family JCP76_12395 PF14659 Phage integrase, N-terminal SAM-like domain JCP76_12400 PF00872 Transposase, Mutator family JCP76_12415 PF00664 ABC transporter transmembrane region JCP76_12415 PF00005 ABC transporter JCP76_12420 PF00005 ABC transporter JCP76_12420 PF00664 ABC transporter transmembrane region JCP76_12425 PF02909 Tetracyclin repressor-like, C-terminal domain JCP76_12425 PF00440 Bacterial regulatory proteins, tetR family JCP76_12435 PF07690 Major Facilitator Superfamily JCP76_12440 PF02772 S-adenosylmethionine synthetase, central domain JCP76_12440 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCP76_12440 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCP76_12600 PF00152 tRNA synthetases class II (D, K and N) JCP76_12600 PF01336 OB-fold nucleic acid binding domain JCP76_12605 PF01207 Dihydrouridine synthase (Dus) JCP76_12610 PF01430 Hsp33 protein JCP76_12615 PF06480 FtsH Extracellular JCP76_12615 PF01434 Peptidase family M41 JCP76_12615 PF00004 ATPase family associated with various cellular activities (AAA) JCP76_12615 PF17862 AAA+ lid domain JCP76_12620 PF00156 Phosphoribosyl transferase domain JCP76_12625 PF11734 TilS substrate C-terminal domain JCP76_12625 PF01171 PP-loop family JCP76_12630 PF00575 S1 RNA binding domain JCP76_12640 PF01479 S4 domain JCP76_12645 PF14667 Polysaccharide biosynthesis C-terminal domain JCP76_12645 PF01943 Polysaccharide biosynthesis protein JCP76_12650 PF03461 TRCF domain JCP76_12650 PF17757 UvrB interaction domain JCP76_12650 PF00270 DEAD/DEAH box helicase JCP76_12650 PF00271 Helicase conserved C-terminal domain JCP76_12650 PF02559 CarD-like/TRCF domain JCP76_12655 PF01195 Peptidyl-tRNA hydrolase JCP76_12660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCP76_12660 PF00056 lactate/malate dehydrogenase, NAD binding domain JCP76_12670 PF01709 Transcriptional regulator JCP76_12685 PF00877 NlpC/P60 family JCP76_12695 PF04085 rod shape-determining protein MreC JCP76_12705 PF00834 Ribulose-phosphate 3 epimerase family JCP76_12710 PF03193 RsgA GTPase JCP76_12710 PF16745 RsgA N-terminal domain JCP76_12715 PF03793 PASTA domain JCP76_12715 PF00069 Protein kinase domain JCP76_12725 PF01029 NusB family JCP76_12725 PF01189 16S rRNA methyltransferase RsmB/F JCP76_12730 PF02911 Formyl transferase, C-terminal domain JCP76_12730 PF00551 Formyl transferase JCP76_12735 PF01327 Polypeptide deformylase JCP76_12740 PF18074 Primosomal protein N C-terminal domain JCP76_12740 PF17764 3′ DNA-binding domain (3′BD) JCP76_12740 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCP76_12740 PF04851 Type III restriction enzyme, res subunit JCP76_12740 PF00271 Helicase conserved C-terminal domain JCP76_12745 PF01192 RNA polymerase Rpb6 JCP76_12750 PF00625 Guanylate kinase JCP76_12760 PF03755 YicC-like family, N-terminal region JCP76_12760 PF08340 Domain of unknown function (DUF1732) JCP76_12770 PF01734 Patatin-like phospholipase JCP76_12780 PF09515 Thiamine transporter protein (Thia_YuaJ) JCP76_12785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCP76_12785 PF14572 Phosphoribosyl synthetase-associated domain JCP76_12790 PF00132 Bacterial transferase hexapeptide (six repeats) JCP76_12790 PF00483 Nucleotidyl transferase JCP76_12795 PF00156 Phosphoribosyl transferase domain JCP76_12795 PF09182 Bacterial purine repressor, N-terminal JCP76_12800 PF00950 ABC 3 transport family JCP76_12805 PF00005 ABC transporter JCP76_12810 PF01297 Zinc-uptake complex component A periplasmic JCP76_12810 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCP76_12815 PF08544 GHMP kinases C terminal JCP76_12815 PF00288 GHMP kinases N terminal domain JCP76_12820 PF09924 Uncharacterised conserved protein (DUF2156) JCP76_12820 PF03706 Lysylphosphatidylglycerol synthase TM region JCP76_12825 PF03807 NADP oxidoreductase coenzyme F420-dependent JCP76_12825 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCP76_12835 PF12072 Domain of unknown function (DUF3552) JCP76_12835 PF01966 HD domain JCP76_12835 PF00013 KH domain JCP76_12840 PF00154 recA bacterial DNA recombination protein JCP76_12845 PF02464 Competence-damaged protein JCP76_12845 PF18146 Damage-inducible protein CinA KH domain JCP76_12845 PF00994 Probable molybdopterin binding domain JCP76_12850 PF01066 CDP-alcohol phosphatidyltransferase JCP76_12855 PF13464 Domain of unknown function (DUF4115) JCP76_12860 PF00675 Insulinase (Peptidase family M16) JCP76_12860 PF05193 Peptidase M16 inactive domain JCP76_12865 PF05193 Peptidase M16 inactive domain JCP76_12870 PF01741 Large-conductance mechanosensitive channel, MscL JCP76_12875 PF13673 Acetyltransferase (GNAT) domain JCP76_12880 PF06257 Biofilm formation stimulator VEG JCP76_12890 PF05991 YacP-like NYN domain JCP76_12895 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCP76_12895 PF00588 SpoU rRNA Methylase family JCP76_12900 PF00636 Ribonuclease III domain JCP76_12905 PF09190 DALR domain JCP76_12905 PF01406 tRNA synthetases class I (C) catalytic domain JCP76_12910 PF06426 Serine acetyltransferase, N-terminal JCP76_12910 PF00132 Bacterial transferase hexapeptide (six repeats) JCP76_12915 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCP76_12925 PF18073 Rubredoxin metal binding domain JCP76_12930 PF00692 dUTPase JCP76_12940 PF00696 Amino acid kinase family JCP76_12945 PF00171 Aldehyde dehydrogenase family JCP76_12960 PF07690 Major Facilitator Superfamily JCP76_12975 PF00005 ABC transporter JCP76_12980 PF00881 Nitroreductase family JCP76_12990 PF01476 LysM domain JCP76_12990 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP76_12995 PF00106 short chain dehydrogenase JCP76_13000 PF00132 Bacterial transferase hexapeptide (six repeats) JCP76_13000 PF12464 Maltose acetyltransferase JCP76_13000 PF14602 Hexapeptide repeat of succinyl-transferase JCP76_13005 PF03466 LysR substrate binding domain JCP76_13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP76_13010 PF00874 PRD domain JCP76_13010 PF03123 CAT RNA binding domain JCP76_13015 PF02378 Phosphotransferase system, EIIC JCP76_13015 PF00367 phosphotransferase system, EIIB JCP76_13015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_13020 PF05368 NmrA-like family JCP76_13035 PF06445 GyrI-like small molecule binding domain JCP76_13035 PF12833 Helix-turn-helix domain JCP76_13040 PF00872 Transposase, Mutator family JCP76_13050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP76_13050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP76_13055 PF03591 AzlC protein JCP76_13065 PF00107 Zinc-binding dehydrogenase JCP76_13065 PF08240 Alcohol dehydrogenase GroES-like domain JCP76_13070 PF01207 Dihydrouridine synthase (Dus) JCP76_13075 PF01061 ABC-2 type transporter JCP76_13080 PF00005 ABC transporter JCP76_13085 PF05188 MutS domain II JCP76_13085 PF05192 MutS domain III JCP76_13085 PF05190 MutS family domain IV JCP76_13085 PF01624 MutS domain I JCP76_13085 PF00488 MutS domain V JCP76_13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_13090 PF00512 His Kinase A (phospho-acceptor) domain JCP76_13095 PF00486 Transcriptional regulatory protein, C terminal JCP76_13095 PF00072 Response regulator receiver domain JCP76_13105 PF00005 ABC transporter JCP76_13135 PF00392 Bacterial regulatory proteins, gntR family JCP76_13135 PF07702 UTRA domain JCP76_13140 PF13419 Haloacid dehalogenase-like hydrolase JCP76_13145 PF03613 PTS system mannose/fructose/sorbose family IID component JCP76_13150 PF03609 PTS system sorbose-specific iic component JCP76_13155 PF03830 PTS system sorbose subfamily IIB component JCP76_13160 PF03610 PTS system fructose IIA component JCP76_13165 PF01380 SIS domain JCP76_13210 PF03432 Relaxase/Mobilisation nuclease domain JCP76_13295 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP76_13295 PF02486 Replication initiation factor JCP76_13305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP76_13305 PF01348 Type II intron maturase JCP76_13335 PF00877 NlpC/P60 family JCP76_13360 PF07690 Major Facilitator Superfamily JCP76_13370 PF05257 CHAP domain JCP76_13370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP76_13375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_13375 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_13380 PF04650 YSIRK type signal peptide JCP76_13380 PF00746 LPXTG cell wall anchor motif JCP76_13380 PF08829 Alpha C protein N terminal JCP76_13380 PF17480 AlphaC C-terminal JCP76_13390 PF12833 Helix-turn-helix domain JCP76_13420 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCP76_13420 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCP76_13440 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCP76_13440 PF01297 Zinc-uptake complex component A periplasmic JCP76_13450 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCP76_13450 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCP76_13455 PF00471 Ribosomal protein L33 JCP76_13465 PF01783 Ribosomal L32p protein family JCP76_13470 PF00253 Ribosomal protein S14p/S29e JCP76_13475 PF00005 ABC transporter JCP76_13475 PF00664 ABC transporter transmembrane region JCP76_13480 PF00005 ABC transporter JCP76_13480 PF00664 ABC transporter transmembrane region JCP76_13490 PF00005 ABC transporter JCP76_13500 PF00440 Bacterial regulatory proteins, tetR family JCP76_13510 PF01297 Zinc-uptake complex component A periplasmic JCP76_13515 PF00950 ABC 3 transport family JCP76_13525 PF00005 ABC transporter JCP76_13535 PF00589 Phage integrase family JCP76_13535 PF02899 Phage integrase, N-terminal SAM-like domain JCP76_13540 PF00380 Ribosomal protein S9/S16 JCP76_13545 PF00572 Ribosomal protein L13 JCP76_13550 PF00210 Ferritin-like domain JCP76_13555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP76_13555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP76_13560 PF01478 Type IV leader peptidase family JCP76_13560 PF06750 Bacterial Peptidase A24 N-terminal domain JCP76_13565 PF01625 Peptide methionine sulfoxide reductase JCP76_13570 PF13419 Haloacid dehalogenase-like hydrolase JCP76_13575 PF02595 Glycerate kinase family JCP76_13580 PF03633 Glycosyl hydrolase family 65, C-terminal domain JCP76_13580 PF03636 Glycosyl hydrolase family 65, N-terminal domain JCP76_13580 PF03632 Glycosyl hydrolase family 65 central catalytic domain JCP76_13585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP76_13585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP76_13590 PF01261 Xylose isomerase-like TIM barrel JCP76_13595 PF00107 Zinc-binding dehydrogenase JCP76_13600 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_13605 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_13610 PF01547 Bacterial extracellular solute-binding protein JCP76_13615 PF00128 Alpha amylase, catalytic domain JCP76_13620 PF00356 Bacterial regulatory proteins, lacI family JCP76_13620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP76_13625 PF04983 RNA polymerase Rpb1, domain 3 JCP76_13625 PF00623 RNA polymerase Rpb1, domain 2 JCP76_13625 PF05000 RNA polymerase Rpb1, domain 4 JCP76_13625 PF04997 RNA polymerase Rpb1, domain 1 JCP76_13625 PF04998 RNA polymerase Rpb1, domain 5 JCP76_13630 PF04563 RNA polymerase beta subunit JCP76_13630 PF04561 RNA polymerase Rpb2, domain 2 JCP76_13630 PF10385 RNA polymerase beta subunit external 1 domain JCP76_13630 PF04565 RNA polymerase Rpb2, domain 3 JCP76_13630 PF00562 RNA polymerase Rpb2, domain 6 JCP76_13630 PF04560 RNA polymerase Rpb2, domain 7 JCP76_13640 PF02653 Branched-chain amino acid transport system / permease component JCP76_13645 PF00005 ABC transporter JCP76_13650 PF02237 Biotin protein ligase C terminal domain JCP76_13650 PF03099 Biotin/lipoate A/B protein ligase family JCP76_13650 PF08279 HTH domain JCP76_13665 PF00348 Polyprenyl synthetase JCP76_13685 PF04205 FMN-binding domain JCP76_13690 PF02424 ApbE family JCP76_13700 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP76_13700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP76_13705 PF01136 Peptidase family U32 JCP76_13705 PF16325 Peptidase family U32 C-terminal domain JCP76_13710 PF01136 Peptidase family U32 JCP76_13715 PF10431 C-terminal, D2-small domain, of ClpB protein JCP76_13715 PF02861 Clp amino terminal domain, pathogenicity island component JCP76_13715 PF00004 ATPase family associated with various cellular activities (AAA) JCP76_13715 PF17871 AAA lid domain JCP76_13715 PF07724 AAA domain (Cdc48 subfamily) JCP76_13720 PF17727 CtsR C-terminal dimerization domain JCP76_13720 PF05848 CtsR N-terminal HTH domain JCP76_13785 PF00486 Transcriptional regulatory protein, C terminal JCP76_13785 PF00072 Response regulator receiver domain JCP76_13790 PF00512 His Kinase A (phospho-acceptor) domain JCP76_13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_13790 PF00672 HAMP domain JCP76_13790 PF13426 PAS domain JCP76_13795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCP76_13795 PF02403 Seryl-tRNA synthetase N-terminal domain JCP76_13800 PF00571 CBS domain JCP76_13800 PF00478 IMP dehydrogenase / GMP reductase domain JCP76_13810 PF06071 Protein of unknown function (DUF933) JCP76_13810 PF01926 50S ribosome-binding GTPase JCP76_13815 PF06107 Bacterial protein of unknown function (DUF951) JCP76_13820 PF02195 ParB-like nuclease domain JCP76_13820 PF17762 HTH domain found in ParB protein JCP76_13825 PF13614 AAA domain JCP76_13830 PF02527 rRNA small subunit methyltransferase G JCP76_13835 PF13932 GidA associated domain JCP76_13835 PF01134 Glucose inhibited division protein A JCP76_13840 PF01926 50S ribosome-binding GTPase JCP76_13840 PF12631 MnmE helical domain JCP76_13840 PF10396 GTP-binding protein TrmE N-terminus JCP76_13850 PF14804 Jag N-terminus JCP76_13850 PF01424 R3H domain JCP76_13855 PF02096 60Kd inner membrane protein JCP76_13860 PF00825 Ribonuclease P JCP76_13865 PF00468 Ribosomal protein L34 JCP76_13910 PF17400 Family of unknown function (DUF5406) JCP76_13920 PF13683 Integrase core domain JCP76_13920 PF01610 Transposase JCP76_13935 PF13614 AAA domain JCP76_13955 PF11799 impB/mucB/samB family C-terminal domain JCP76_13955 PF11798 IMS family HHH motif JCP76_13955 PF00817 impB/mucB/samB family JCP76_13965 PF02796 Helix-turn-helix domain of resolvase JCP76_13965 PF00239 Resolvase, N terminal domain JCP76_13970 PF02661 Fic/DOC family JCP76_14010 PF00436 Single-strand binding protein family JCP76_14030 PF01131 DNA topoisomerase JCP76_14030 PF01751 Toprim domain JCP76_14035 PF13154 Protein of unknown function (DUF3991) JCP76_14040 PF18840 Large polyvalent protein associated domain 25 JCP76_14110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP76_14135 PF12696 TraM recognition site of TraD and TraG JCP76_14175 PF04203 Sortase domain JCP76_14185 PF13683 Integrase core domain JCP76_14185 PF01610 Transposase JCP76_14195 PF03050 Transposase IS66 family JCP76_14195 PF13817 IS66 C-terminal element JCP76_14195 PF13007 Transposase C of IS166 homeodomain JCP76_14195 PF13005 zinc-finger binding domain of transposase IS66 JCP76_14215 PF02548 Ketopantoate hydroxymethyltransferase JCP76_14220 PF02569 Pantoate-beta-alanine ligase JCP76_14225 PF02261 Aspartate decarboxylase JCP76_14240 PF00872 Transposase, Mutator family JCP76_14250 PF01610 Transposase JCP76_14250 PF13683 Integrase core domain JCP76_14255 PF00872 Transposase, Mutator family JCP76_14270 PF00392 Bacterial regulatory proteins, gntR family JCP76_14270 PF07702 UTRA domain JCP76_14275 PF01380 SIS domain JCP76_14280 PF01791 DeoC/LacD family aldolase JCP76_14290 PF02378 Phosphotransferase system, EIIC JCP76_14300 PF13495 Phage integrase, N-terminal SAM-like domain JCP76_14300 PF00589 Phage integrase family JCP76_14320 PF02378 Phosphotransferase system, EIIC JCP76_14320 PF00367 phosphotransferase system, EIIB JCP76_14320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_14325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_14325 PF00367 phosphotransferase system, EIIB JCP76_14325 PF02378 Phosphotransferase system, EIIC JCP76_14330 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JCP76_14335 PF01380 SIS domain JCP76_14335 PF01418 Helix-turn-helix domain, rpiR family JCP76_14340 PF00239 Resolvase, N terminal domain JCP76_14340 PF02796 Helix-turn-helix domain of resolvase JCP76_14350 PF01797 Transposase IS200 like JCP76_14360 PF00356 Bacterial regulatory proteins, lacI family JCP76_14365 PF08244 Glycosyl hydrolases family 32 C terminal JCP76_14365 PF00251 Glycosyl hydrolases family 32 N-terminal domain JCP76_14370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_14370 PF00367 phosphotransferase system, EIIB JCP76_14370 PF02378 Phosphotransferase system, EIIC JCP76_14375 PF00480 ROK family JCP76_14410 PF13817 IS66 C-terminal element JCP76_14410 PF13007 Transposase C of IS166 homeodomain JCP76_14410 PF03050 Transposase IS66 family JCP76_14410 PF13005 zinc-finger binding domain of transposase IS66 JCP76_14420 PF00834 Ribulose-phosphate 3 epimerase family JCP76_14435 PF03611 PTS system sugar-specific permease component JCP76_14450 PF00872 Transposase, Mutator family JCP76_14455 PF09221 Bacteriocin class IId cyclical uberolysin-like JCP76_14530 PF01751 Toprim domain JCP76_14530 PF01131 DNA topoisomerase JCP76_14535 PF13154 Protein of unknown function (DUF3991) JCP76_14540 PF18840 Large polyvalent protein associated domain 25 JCP76_14595 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JCP76_14610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP76_14635 PF12696 TraM recognition site of TraD and TraG JCP76_14675 PF04203 Sortase domain JCP76_14700 PF17400 Family of unknown function (DUF5406) JCP76_14760 PF03830 PTS system sorbose subfamily IIB component JCP76_14765 PF03609 PTS system sorbose-specific iic component JCP76_14770 PF03613 PTS system mannose/fructose/sorbose family IID component JCP76_14775 PF01380 SIS domain JCP76_14780 PF00874 PRD domain JCP76_14780 PF00158 Sigma-54 interaction domain JCP76_14780 PF03610 PTS system fructose IIA component JCP76_14785 PF13419 Haloacid dehalogenase-like hydrolase JCP76_14790 PF08270 M protein trans-acting positive regulator (MGA) PRD domain JCP76_14790 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JCP76_14790 PF05043 Mga helix-turn-helix domain JCP76_14800 PF01610 Transposase JCP76_14800 PF13683 Integrase core domain JCP76_14810 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JCP76_14810 PF12008 Type I restriction and modification enzyme - subunit R C terminal JCP76_14810 PF18766 SWI2/SNF2 ATPase JCP76_14815 PF01380 SIS domain JCP76_14820 PF00294 pfkB family carbohydrate kinase JCP76_14825 PF07702 UTRA domain JCP76_14825 PF00392 Bacterial regulatory proteins, gntR family JCP76_14835 PF00872 Transposase, Mutator family JCP76_14845 PF03606 C4-dicarboxylate anaerobic carrier JCP76_14890 PF00158 Sigma-54 interaction domain JCP76_14890 PF00874 PRD domain JCP76_14890 PF03610 PTS system fructose IIA component JCP76_14895 PF00367 phosphotransferase system, EIIB JCP76_14895 PF02378 Phosphotransferase system, EIIC JCP76_14895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP76_14900 PF00232 Glycosyl hydrolase family 1 JCP76_14905 PF03123 CAT RNA binding domain JCP76_14905 PF00874 PRD domain JCP76_14910 PF01610 Transposase JCP76_14910 PF13683 Integrase core domain JCP76_14915 PF00027 Cyclic nucleotide-binding domain JCP76_14915 PF13545 Crp-like helix-turn-helix domain JCP76_14925 PF01790 Prolipoprotein diacylglyceryl transferase JCP76_14930 PF00403 Heavy-metal-associated domain JCP76_14935 PF00403 Heavy-metal-associated domain JCP76_14940 PF01022 Bacterial regulatory protein, arsR family JCP76_14950 PF00403 Heavy-metal-associated domain JCP76_14955 PF13610 DDE domain JCP76_14965 PF13673 Acetyltransferase (GNAT) domain JCP76_14975 PF00589 Phage integrase family JCP76_15010 PF08534 Redoxin JCP76_15030 PF00005 ABC transporter JCP76_15045 PF04055 Radical SAM superfamily JCP76_15065 PF02811 PHP domain JCP76_15080 PF00528 Binding-protein-dependent transport system inner membrane component JCP76_15090 PF08402 TOBE domain JCP76_15090 PF00005 ABC transporter JCP76_15105 PF00266 Aminotransferase class-V JCP76_15115 PF00072 Response regulator receiver domain JCP76_15115 PF00486 Transcriptional regulatory protein, C terminal JCP76_15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_15120 PF00512 His Kinase A (phospho-acceptor) domain JCP76_15120 PF00672 HAMP domain JCP76_15125 PF13610 DDE domain JCP76_15140 PF01471 Putative peptidoglycan binding domain JCP76_15140 PF08924 Domain of unknown function (DUF1906) JCP76_15150 PF00239 Resolvase, N terminal domain JCP76_15150 PF02796 Helix-turn-helix domain of resolvase JCP76_15155 PF01653 NAD-dependent DNA ligase adenylation domain JCP76_15155 PF03120 NAD-dependent DNA ligase OB-fold domain JCP76_15155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCP76_15155 PF12826 Helix-hairpin-helix motif JCP76_15155 PF00533 BRCA1 C Terminus (BRCT) domain JCP76_15165 PF00239 Resolvase, N terminal domain JCP76_15165 PF02796 Helix-turn-helix domain of resolvase JCP76_15170 PF13610 DDE domain JCP76_15200 PF18008 Replication initiator protein A C-terminal domain JCP76_15200 PF06970 Replication initiator protein A (RepA) N-terminus JCP76_15205 PF13610 DDE domain JCP76_15210 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) JCP76_15215 PF00398 Ribosomal RNA adenine dimethylase JCP76_15240 PF08241 Methyltransferase domain JCP76_15250 PF00583 Acetyltransferase (GNAT) family JCP76_15255 PF01636 Phosphotransferase enzyme family JCP76_15265 PF01610 Transposase JCP76_15265 PF13683 Integrase core domain JCP76_15270 PF13280 WYL domain JCP76_15270 PF08279 HTH domain JCP76_15275 PF13610 DDE domain JCP76_15305 PF13610 DDE domain JCP76_15315 PF00486 Transcriptional regulatory protein, C terminal JCP76_15315 PF00072 Response regulator receiver domain JCP76_15320 PF00512 His Kinase A (phospho-acceptor) domain JCP76_15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP76_15325 PF01610 Transposase JCP76_15325 PF13683 Integrase core domain JCP76_15330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP76_15330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP76_15335 PF07478 D-ala D-ala ligase C-terminus JCP76_15335 PF01820 D-ala D-ala ligase N-terminus JCP76_15340 PF01427 D-ala-D-ala dipeptidase JCP76_15345 PF02557 D-alanyl-D-alanine carboxypeptidase JCP76_15350 PF04892 VanZ like family JCP76_15355 PF01022 Bacterial regulatory protein, arsR family JCP76_15370 PF00239 Resolvase, N terminal domain JCP76_15370 PF02796 Helix-turn-helix domain of resolvase JCP76_15375 PF00665 Integrase core domain JCP76_15375 PF13936 Helix-turn-helix domain JCP76_15390 PF13610 DDE domain JCP76_15395 PF13610 DDE domain JCP76_15415 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JCP76_15425 PF02796 Helix-turn-helix domain of resolvase JCP76_15425 PF00239 Resolvase, N terminal domain JCP76_15430 PF11798 IMS family HHH motif JCP76_15430 PF11799 impB/mucB/samB family C-terminal domain JCP76_15430 PF00817 impB/mucB/samB family JCP76_15450 PF13614 AAA domain JCP76_15500 PF03432 Relaxase/Mobilisation nuclease domain JCP76_15540 PF03432 Relaxase/Mobilisation nuclease domain JCP76_15565 PF13610 DDE domain