LOCUS KM454492 3302 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 1, complete sequence. ACCESSION KM454492 VERSION KM454492.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 3302) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 3302) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3302 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="1" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 19..3285 /note="VP1" /codon_start=1 /product="RNA-dependent RNA polymerase" /protein_id="AIZ08926.1" /translation="MGKYNLILSEYLSFIYNSQSAVQIPIYYSSNSELEGRCIEFHSK CLENSKNGLSLKNLFTEYEDVIENATLLSILSYSYDKYNAVERKLVKYAKSKPLEADL TVNELDYENNKLTSELFPTAEEYTDSLMDPAILTSLSSNLNAVMFWLEKHENDVAEKF KIYKRRLDLFTIVASTVNKYGVPRHNEKYRYEYEVMKDKPYYLVTWANSSIEMLMSVF SHEDYLIAKELIVLSYSNRSTLAKLVSSPMSILVALVDVNGTFITNEELELEFSNKYV KAIVPDQTFDELNQMLENMRKAGLVNIPNMIQDWLINCSIEKFPLMAKIYSWSFHVGF RKQKMLDAALDQLKTEYTKDVDDEMYREYTMLIRDEVVKMLEEPVKHDDHMLQDSELA GLLSMSSASNGESRQLKFGRKTIFSTKKNMHVMDDMANGKYTPGIIPPVNINKPIPLG RRDVPGRRTRIIFILPYEYFIAQHAVVEKMLIYAKRTREYAEFYSQSNQLLSYGDVTR FLSNNAMVLYTDVSQWDSSQHNTQPFRKGIIMGLDILANMTNNAKVVQTLNLYKQTQI NLMDSYVQIPDGNIIKKIQYGAVASGEKQTKAANSIANLALIKTVLSRISNKYSFVTK IIRVDGDDNYAVLQFNTEVTKQMIQDVSNDIRETYARMNARVKALVSTVGIEIAKRYI AGGKIFFRAGINLLNNEKRGQSTQWDQAAVLYSNYIVNRLRGFETDREFVLTKIMQMT SVAITGSLRLFPSERVLTTNSTFKVFDSEDFIIEYGTTDDEVYIQRAFMSLSSQKSGI ADEIAASPTFKSYVSKLSEQLLFSKNNIVSRGIALTEKAKLNSYAPISLEKRRAQISA LLTMLQKPVTFKSSKITINDILRDIKPFFSVSEAHVPIQYQRFMPTLPDNVQYIIQCI GSRTYQIEDDGSKSAISRLISKYSVYKPSIEELYKVISLHENEIQLYLISLGVPKIDA DTYIGSKIYSQDKYRILESYVYNLLSINYGCYQLFDFNSPDLEKLIRIPFKGKIPAVT FILHLYAKLEIINYAIKNGSWISLFCNYPKSEMIKLWKKMWNITSLRSPYTNANFFQD " ORIGIN 1 ggctattaaa gctgtacaat ggggaagtat aatctaatct tgtcagaata tttatcattt 61 atatataatt cgcaatctgc agttcaaatt ccgatttact actcttccaa cagtgaatta 121 gaaggcagat gtattgaatt ccattctaaa tgcttagaaa actcgaagaa cggattatca 181 ttgaaaaatt tatttactga gtacgaagat gttatagaaa atgctacact actatcaata 241 ttatcatatt cttatgataa atataatgct gttgaaagaa agctagtgaa atatgcaaaa 301 agtaaaccat tggaggctga tttaacagtg aatgaattag attatgaaaa taataagcta 361 acttctgagc tatttccaac ggcagaggaa tatactgatt cattaatgga tccagcaatt 421 ctaacttcct tgtcatcaaa tttaaatgca gttatgtttt ggctagaaaa acacgaaaat 481 gatgttgctg aaaaatttaa aatttataaa aggagattag atttatttac tatagtagct 541 tcaacagtaa ataaatatgg tgtaccaaga cataacgaaa aatatagata tgaatatgag 601 gtaatgaaag ataaaccata ctacctcgta acatgggcga attcttcaat tgaaatgtta 661 atgtcagttt tctctcatga ggattattta attgcaaaag aactaatagt attgtcatat 721 tctaataggt cgactctagc gaaactagta tcatcaccaa tgtcaattct agtagcttta 781 gtggatgtta atggaacatt cattacaaat gaagaattag aattagagtt ttcaaacaaa 841 tatgtgaaag caattgttcc agatcaaaca tttgacgaat taaatcagat gctcgagaat 901 atgagaaagg ctggattagt taatatacct aatatgatac aagactggtt aattaactgc 961 tctattgaaa aatttccatt aatggctaag atatattcgt ggtcgtttca cgttggattc 1021 agaaaacaga aaatgttaga cgctgcacta gatcaattga aaactgaata tacgaaagat 1081 gtggacgatg aaatgtatcg agaatatacg atgttaataa gagatgaagt cgtgaagatg 1141 cttgaagaac cagtaaagca tgatgatcac atgttacaag attctgagtt ggctggttta 1201 ctatctatgt cttcagcgtc gaacggtgaa tccagacaac ttaaattcgg tagaaaaaca 1261 attttctcga ctaaaaagaa tatgcacgtt atggatgaca tggctaatgg aaaatataca 1321 ccaggtataa taccaccagt aaatattaat aaaccaatac cattaggaag gagagatgtg 1381 ccaggaagaa ggactagaat aatatttatc ttaccatacg agtattttat agcacagcac 1441 gctgtagttg aaaaaatgtt aatttatgcg aaacgcacga gagaatatgc tgaattttat 1501 tcgcaatcaa atcaactact gtcatatggt gacgttacac gttttttatc taataatgct 1561 atggtattat atacagatgt atctcaatgg gactcatctc agcataatac tcaaccattt 1621 aggaaaggaa taataatggg attagacata ctagctaata tgactaacaa tgctaaagtt 1681 gttcagacat taaatttata taaacaaaca caaataaatc tcatggattc atatgttcaa 1741 ataccagatg gtaatattat taagaaaata caatatggag ctgtagcgtc aggagagaaa 1801 cagactaaag cagcaaattc aatagcaaat ttagcattga ttaagacagt tctatcacgc 1861 atttctaata aatattcatt cgtaacaaaa ataataagag ttgacggaga tgacaattat 1921 gcagtgttac aattcaatac agaggtaacc aagcaaatga ttcaggatgt atcaaatgat 1981 ataagagaaa cttatgcacg aatgaatgct agagttaagg ctctagtatc tactgtggga 2041 atagaaatag ctaaaagata tattgcggga gggaagatat tctttagagc tggaataaat 2101 ctacttaaca atgaaaagag aggacaaagt acacaatggg atcaagcagc agttctatac 2161 tcaaattaca ttgtgaatag acttcgagga tttgaaactg atagagaatt cgttttaact 2221 aaaataatgc aaatgacgtc agttgctatt actgggtcac taagactttt tccttctgaa 2281 cgcgtattaa ctacgaattc tacattcaaa gtatttgatt cagaggattt tattatagaa 2341 tatggaacaa ctgacgatga agtatatata caaagagcgt ttatgtcttt atcgagtcag 2401 aaatcaggta tagctgatga aatagctgca tcaccaacat ttaagagtta tgtatctaaa 2461 ctatctgaac agttattatt ctcaaaaaat aatatagtgt ctagaggaat agctttaact 2521 gaaaaagcaa agctgaattc atatgcacca atatcgcttg agaagagacg cgcacagata 2581 tcagctttac tgaccatgtt acagaaaccg gttactttta aatcaagtaa aataacaata 2641 aatgacatac tcagagacat aaaaccattt ttttcggtaa gtgaagcgca tgtgccaata 2701 caatatcaaa gatttatgcc aactttgcca gacaacgtgc aatatataat tcaatgtata 2761 ggatctagaa cttatcaaat tgaagatgac ggttcaaaat cagccatatc tagattaata 2821 tcgaagtatt cagtttataa accttcaata gaagagttat ataaagtaat ttcactacat 2881 gagaatgaaa tacaattgta tttgatttca ttaggcgtac cgaaaataga tgctgacacg 2941 tacattggat caaaaattta ttctcaagat aagtatagga tattagaatc atacgtatat 3001 aatttattgt ctattaatta tggatgttat cagctttttg actttaactc accagatttg 3061 gaaaagttaa tcagaatacc gtttaaggga aaaataccag ctgttacctt tatattacat 3121 ttatatgcta agttagaaat tataaattat gctattaaaa atggttcatg gataagttta 3181 ttctgtaatt atccaaaatc agagatgata aaattatgga agaagatgtg gaacattacg 3241 tcactacgtt cgccatatac taatgcgaac ttctttcaag attagaacgc ttagatgtga 3301 cc // LOCUS KM454493 2687 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 2, complete sequence. ACCESSION KM454493 VERSION KM454493.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 2687) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 2687) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2687 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="2" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 17..2659 /note="VP2" /codon_start=1 /product="core shell protein" /protein_id="AIZ08927.1" /translation="MAYRKRGARREVNVNNNDRMQEKDDEKQDQNNKMQLSDKVLSKK EEIITDSQEKIEIVDEVKKSTKEESKQLLEVLKKKKKHQKEIQYEILQKTIPTFEPKG SILKKLEDIKPEQAKKQTKLFRIFEPRQSPIYRPNGEKELRNRWYWKPKKDTLPDGDY DVREYFLNLYDQVLTEMPDYLLLKDMAVENKNSRDAGKVVDFETASICDAIFQDEETE GAVRRFIAEMRQHVQADRNVVNYPSILHPIDYAFNEHFLQHQLVEPLNNDIIFNHIPE RIRNDVNYILNMDRNLPSTARYIRPNLLQDRPNLHDNSESLWDTITTSNYILARSVVP DLKELVSTEAQIQKMSQDLQLEALTIQSETQFLTGINSQAANDCFKTLIAAMLSQRTM SLDFVTTNYMSLISGMWLLTVTPNDMFIRESLVACQLAIVNTIVYPAFGMQRMHYRNG DPQTPFQIAEQQIQNFQVANWLHFVNNNQFRQVVIDGVLNQVLNDNIRNGHVINQLME ALMQLSRQQFPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLLAYNYETLMACVTMNMQ HVQTLTTEKLQLTSVTSLCMLIGNATVIPSPQTLFHYYNVNVNFHSNYNERINDAVAI ITAANRLNLYQKKMKTIVEDFLKRLYIFDVARVPDDQLYRLRDRLRLLPVEVRRLDIF NLILMNMDQIERASDKIAQGVIIAYRDMQLERDEMYGYVNMARNLDGFQQINLEELMR TGDYAQITNMLLNNQPVALVGALPFTTDSSVISLIAKLDATVFAQIVKLRKVDTLKPI LYKINSDSNDFYLVANYDWVPTSTTKVYKQIPQQFDFRNSMHMLTSNLTFTVYSDLLA FVSADTVEPINAVAFDNMRIMNEL" ORIGIN 1 ggctattaaa ggttcaatgg cgtacaggaa acgtggagcg cgccgtgagg taaatgtcaa 61 taataatgat cgaatgcaag agaaggatga cgaaaaacaa gatcaaaaca ataaaatgca 121 gttatctgat aaagtacttt caaagaaaga agaaattata actgatagcc aagaaaagat 181 tgaaattgtt gacgaagtaa aaaaatcaac gaaggaagaa tccaaacaat tacttgaagt 241 gttaaaaaaa aaaaaaaagc accagaaaga gatacaatat gaaattttac aaaaaacaat 301 accaacattt gaaccaaaag ggtcaatatt aaagaaatta gaggatatta aaccggaaca 361 agcgaagaaa caaaccaaat tattcagaat atttgaacca agacaatcac ctatatatag 421 gccaaatggt gaaaaagaac tacgtaatag atggtattgg aaaccaaaga aagacacctt 481 accggatgga gattacgacg tcagagaata ttttcttaat ttatatgatc aagttcttac 541 tgagatgcca gattacttat tattgaaaga catggcagtt gaaaataaga attcaaggga 601 cgcaggcaag gttgtcgact ttgaaacggc aagtatttgt gatgctatat ttcaagatga 661 agaaacggaa ggtgcagtga gaagatttat cgcggaaatg agacagcatg tacaagctga 721 tagaaatgtc gtcaactatc cgtcaatact acatccaata gattatgctt ttaatgaaca 781 ctttttacaa caccaattag tagaaccatt aaacaatgat ataatattta accacattcc 841 agaaaggata aggaacgatg ttaattacat actcaatatg gatagaaatt taccatcaac 901 agctagatac ataagaccca atttattaca agatagaccc aatttacatg acaattctga 961 atctttgtgg gacacaataa caacttcaaa ttatattttg gcaagatcag tagtacctga 1021 tttaaaggaa ttagtttcga cagaagcgca aatccaaaag atgtcgcaag atctgcaatt 1081 agaagcattg acaattcaat cagaaacgca gtttttgaca ggtataaatt cgcaggcagc 1141 taatgattgc ttcaaaactt tgattgctgc aatgttaagt caacgaacta tgtcacttga 1201 ttttgtgact actaactata tgtcattaat ttcaggtatg tggctgctaa ctgtcacacc 1261 gaatgatatg tttataaggg agtcattagt tgcatgtcag ttagctatag tgaatacaat 1321 agtgtatcca gcgtttggaa tgcaacgaat gcattataga aatggagatc cgcaaacacc 1381 atttcagata gcagaacagc aaatacaaaa ttttcaagta gcaaattggc tacattttgt 1441 taacaacaat caatttagac aagtagtcat tgacggtgta ttgaatcaag tattgaatga 1501 taatatcagg aatggacatg tcattaacca attgatggag gctctgatgc aattatcacg 1561 acagcagttt ccaacaatgc ctgttgacta taagagatca attcagcgtg gaatcttatt 1621 actatcaaat agacttggtc aattagttga cttaactaga ctattagctt acaactatga 1681 aacactaatg gcatgtgtta caatgaacat gcaacatgtt caaactttaa caacagaaaa 1741 attacagctg acttcagtta catcattatg catgctaatt ggaaatgcaa ctgttatacc 1801 cagtccacaa acgctgtttc attattataa cgttaatgtt aacttccact caaattacaa 1861 tgagagaatt aatgatgcag tagctataat aactgcagct aataggctga acttatatca 1921 gaaaaaaatg aaaacaattg ttgaggattt tctaaaaaga ttatacattt tcgatgtagc 1981 tagagttcca gatgaccaac tgtatagatt gagagacaga ctacgattac tgccggtgga 2041 agtaaggcga ttagacattt ttaatttgat actaatgaac atggaccaaa tagaacgtgc 2101 ttcagataaa attgcacaag gcgttattat tgcgtaccgt gatatgcagt tggaaaggga 2161 tgaaatgtat ggttatgtga atatggctag aaatctagat ggattccagc agataaatct 2221 agaagaattg atgagaacgg gtgattatgc acaaataact aatatgcttt taaataatca 2281 accagtagcg ttagttggag ctcttccatt tactacggat tcgtcagtca tatcgctaat 2341 agcgaaactc gacgctacgg tttttgctca aatagttaag ctacgaaaag ttgacacttt 2401 aaagccaata ttgtataaaa taaattcaga ttcaaatgat ttttacttag ttgctaatta 2461 tgattgggta ccaacttcaa ccacaaaagt atataagcaa attccacaac aatttgattt 2521 cagaaattcg atgcatatgt tgacatcaaa tcttacgttc actgtttatt cagatttgct 2581 tgcgttcgta tcagccgata cagtggaacc tataaatgca gttgcgtttg ataacatgcg 2641 catcatgaac gagctataaa cgccaacccc attgtggaga tatgacc // LOCUS KM454494 2591 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 3, complete sequence. ACCESSION KM454494 VERSION KM454494.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 2591) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 2591) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2591 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="3" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 50..2557 /note="VP3" /codon_start=1 /product="RNA-capping methyltransferase" /protein_id="AIZ08928.1" /translation="MKVLALRHSVAQVYADTQVYTHDDTKDGYENAFLISNLTTHNIL YLNYNVKTLEILNKSGIAAVEVQSLDELFTLIRCNFTYDYENNIIYLHDYSYYTNNEI RTDQYWVTKTNIEEYLLPGWKLTYVGYNGSDTRGHYNFSFPCQNAATDDDLIIEYIYS EALDFQNFMLTKIKERMTTSLPIARLSNRVFRDKLYPSLVNKYKHIVNVGPRNESMFT FLNFPKIKQFSNGPYLVKHTIKLKQERWLGKRVSQFDIGQYKNMMNVITTIYHYYNLY HEKPVVYMVGSAPSYWIYDIKQYSNFTFETWDPLDTPYSSMHHREFFSEEDVRKLKDN SILYIDIRTDRGSIDWKEWRKVVEKQTLINLSIAYKYLSTGKAKVCCVKMTAMDLELP VSAKLLHHPTTEIRSEFYLLLDIWDLNNIKRFIPKGVLYSFINNITTENVFIQPPFKI KTSQNDYIVALYALSNDFNNREHVVNLINNQKHSLITVRINNTFKDEPKVGFKNIYDW TFLPTDFEVVNSIITSYDGCLGIFGLSISLSSKPTGNNHLFIINGTDKYYKLDQFANH TGISRRSHQIRFSESATSYSGYIFRDLSNNNFNLIGTNMENSVSGHVYNALIYYRYNY SFDLKRWIYLHSIDKADIEGGRYYEHAPIELIYACRSAKEFAILQDDMTVLRYASEIE NYINKVYSITYADDPNYFIGIKFKNIPYKYDVKVPHLTFGVLFISDNMIPDVIKILKD MRAELFRMNINTSYTYMLSDNIYVANVSGVLSTYFKIYNIFYKKQITFGQSRMFIPHI TLSFSNNKTVRIETTKLSIESIYLRKIRGDTVFDMSE" ORIGIN 1 ggctattaaa gcagtaggag tagtgtgttt tacctctgat ggtgtaaaca tgaaagtact 61 agctttaaga catagtgtgg ctcaggtgta tgcagataca caggtttata ctcatgatga 121 tacgaaggac ggttatgaaa atgcatttct catctctaat cttacaacac ataatatttt 181 atatttaaac tataatgtta aaacacttga aatacttaat aaatcaggaa ttgcagcagt 241 ggaagttcaa tctcttgatg agctatttac tttaattaga tgtaacttta cttatgatta 301 tgagaataat ataatatatt tgcatgacta ttcatattat actaataatg aaataagaac 361 tgatcagtat tgggtgacca aaactaacat tgaagagtat ttattaccag gatggaaatt 421 aacatacgta ggatataatg gaagcgatac aagaggacat tacaattttt cgttcccatg 481 tcaaaatgcc gcaactgacg acgatttaat aatagaatat atttactctg aagcattaga 541 tttccagaat ttcatgctaa ctaaaataaa agaacgaatg actacatcct taccgatagc 601 gcgtttatca aatagagttt ttagagataa attatatcca tcattagtta ataagtataa 661 acatatagtt aatgtcggac caagaaatga atcaatgttt acatttttga attttccaaa 721 aattaagcaa ttctcaaacg gtccgtattt agttaaacat actatcaaat taaagcagga 781 gagatggtta gggaaaagag tatctcaatt tgatatagga caatataaaa atatgatgaa 841 tgtcatcaca actatttatc attattataa tttatatcac gagaaaccag ttgtatatat 901 ggtaggttcc gctccatcat attggattta cgatattaaa cagtactcta attttacatt 961 tgaaacttgg gatccacttg atactccata ttcatccatg catcatagag agtttttctc 1021 tgaagaagac gttagaaaac taaaagataa ttctatatta tacattgata tccggacaga 1081 tcgtggtagt attgattgga aggagtggag aaaagtggtt gaaaagcaga cgcttattaa 1141 tctttctata gcatataagt atctatcaac tggtaaagca aaagtatgct gcgttaagat 1201 gacagctatg gatttagagc ttccggtttc tgcaaagctg ttacatcatc ccacaactga 1261 aataagatca gaattttact tacttctgga catttgggat ctcaataata ttaaaagatt 1321 tattcctaaa ggagtcttgt attcgtttat aaataacatt actactgaaa atgtatttat 1381 acaaccacca tttaaaataa aaacatccca aaatgactac attgtagctc tttatgcatt 1441 atccaatgat tttaataata gagagcatgt agttaacttg attaacaacc agaaacattc 1501 attaatcact gttagaatta acaatacttt taaagatgaa ccaaaagtgg gatttaaaaa 1561 tatctatgat tggacatttt tacctactga ttttgaagta gttaattcca taataacatc 1621 atatgatggt tgtttaggta tctttggttt atcaatatct ttatcgtcaa aaccaacagg 1681 caataaccat ttatttataa taaatggaac ggacaaatat tataaattgg atcaatttgc 1741 taatcatact ggaatatcaa gaagatcgca ccaaattaga ttttctgaat ccgcaacatc 1801 atattcagga tacatattta gagatttatc taacaataat ttcaatctaa taggaactaa 1861 tatggaaaat tcagtttcag gtcatgtata taatgcgctt atttattata gatataatta 1921 ttcttttgat ttaaaaagat ggatatattt acattcaata gataaagccg acatagaagg 1981 aggaaggtat tatgaacatg caccaataga attaatttat gcttgtaggt cagcaaaaga 2041 atttgctata ctacaagatg atatgactgt actaagatat gctagtgaga ttgaaaatta 2101 cataaataaa gtatatagta taacgtatgc agatgatcca aactacttta taggtattaa 2161 attcaagaat atcccataca aatatgacgt gaaagttcca catttaactt tcggagtatt 2221 atttatctca gataatatga ttccagatgt gataaaaata ttgaaagaca tgagagctga 2281 actttttaga atgaatataa atacaagcta tacctacatg ttatctgata atatatatgt 2341 ggcaaatgtt agtggagttt tatcaacata ctttaaaatt tataatatat tttataaaaa 2401 acaaataact tttggacaat ccagaatgtt tattccacac ataacgttaa gttttagtaa 2461 taataaaaca gtaagaatag agactacaaa attaagtatt gagtcaatat atttacggaa 2521 aattagagga gatacagtat ttgatatgtc tgagtgagct aaaaacttaa cacaccagtc 2581 acgatttgac c // LOCUS KM454495 2362 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 4, complete sequence. ACCESSION KM454495 VERSION KM454495.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 2362) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 2362) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2362 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="4" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 10..2340 /note="VP4" /codon_start=1 /product="protease-activated spike" /protein_id="AIZ08929.1" /translation="MASLIYRQLLANSYTVDLSDEIENIGYAKSKNVTINPGPFAQTG YAPVNWGPGEVNDSTTVEPVLDGPYQPTNFNPPVNYWMLLSPLNAGVVVEGTNSIDRW LATVLVEPNVTTTVRTYTLFGVQEQISVENNSTTKWKFINLIKTTPSGNFTLYSTLLS EPKLHGIMKHGGQLWVYNGETPNATTTGYVTSNYDSLTMTSFCDFYIIPRNQESTCTE YINNGLPPIQNTRNVVSVSISSRNIIHNRAQVNEDIVISKTSLWKGVQYNRDITIRFR FANAIIKSGGLGYKWSEISFKPANYQYTYTRDGEEITAHTTCSVNGVNDFSFNGGSLP TDFVISRYEVIKENSYVYVDYWDDSQAFRNMVYVRSLAANLNDVLCTGGDYSFALPVG QWPVMTGGAVMLHAAGVTLSTQFTDFVSLNSLRFRFSLSVEEPYFSITRTRVTRLYGL PAVNPNNDRDYYEIAGRFSLISLVPSNDDYQTPIMNSVTVRQDLERQLGELREEFNAL SQEIAISQLIDLALLPLDMFSMFSGIKSTIDAAKSMATNVMKKFKKSKLASSVSTLTD SLSDAASSVSRSSSIRSVSSSVSAWTDVSNQLTDISNSVNSISTQTSTISRRLRLKEI ATQTEGMNFDDISAAVLKTKIDKSTQIAANNIPDVITEASEKFIPNRAYRVISNDNVF EASTDGRFFAYKVGTFEEIPFDVQKFADLVTDSPVISAIIDFKTLKNLNDNYGITREQ AFNLLRSDPRVLREFINQDNPIIKNRIEQLILQCRL" ORIGIN 1 ggctataaaa tggcttcgct catttacaga cagttactcg ctaattctta tacagttgat 61 ctatctgatg aaattgaaaa tattggatac gcaaaaagta aaaatgtaac tattaatcca 121 ggtccattcg cacaaacagg atatgctcca gttaattggg gccctggaga agttaatgac 181 tcaacaacag ttgaaccagt tctagatggt ccataccaac caactaattt taatccgcca 241 gtgaattatt ggatgttact atctccttta aatgctggtg ttgtggttga aggaacaaat 301 agtattgatc gttggttagc gactgttcta gtagaaccaa atgttacaac aactgtcaga 361 acatatacat tatttggagt gcaagagcag atatcagtag aaaacaattc aactacaaaa 421 tggaaattta taaatttaat taaaaccact ccatcgggca atttcacatt atattctact 481 ctactatcag aaccgaaatt gcacggaatt atgaaacatg gtgggcagct atgggtttat 541 aatggagaaa ctccaaacgc tactactaca ggctacgtaa cttcaaatta tgattcactt 601 actatgacat ccttttgtga cttttatata attcctagaa atcaagagtc aacatgtaca 661 gaatatatta ataatggatt acctccaata caaaatacta gaaacgtggt ttcagtatct 721 atttcatctc gtaatataat acacaatcga gcacaagtaa atgaggatat tgtaatatca 781 aaaacttcgc tatggaaagg agtacaatat aatcgagata tcacaataag atttagattt 841 gcaaatgcaa ttataaaatc aggtggactg ggctataaat ggtctgaaat ttcatttaaa 901 ccagctaatt atcaatacac atacactaga gacggagaag aaattacagc acatacgaca 961 tgctctgtga atggtgtaaa cgatttcagc tttaatggag gttcattacc tactgatttt 1021 gtaatttcac gttatgaagt tattaaagag aactcatacg tctatgttga ctattgggac 1081 gattcacaag catttagaaa tatggtatat gttagatcat tagcagctaa tttaaatgat 1141 gtattatgta cgggtggtga ttatagcttc gcattaccag taggtcagtg gccagtaatg 1201 actggaggcg ctgtaatgtt acatgctgca ggtgttacat tatcaacgca atttactgac 1261 tttgtttcat taaattcatt aagatttaga tttagtcttt cagtagaaga accatatttc 1321 tcaatcacca gaactcgagt gactagactt tatggcttac cagcagtaaa tccaaataat 1381 gatagggatt attatgaaat agctggaagg ttttctttaa tatcattagt accatctaat 1441 gatgattacc aaacaccaat tatgaattca gtcacagtta gacaagattt ggagcgacag 1501 ttaggagaat taagagaaga attcaacgct ttatctcaag aaatagctat atcacaatta 1561 attgacttag cgttacttcc gttagatatg ttctcaatgt tctcaggaat taaaagcacc 1621 attgatgcag caaaatcaat ggctactaat gtaatgaaaa aatttaaaaa atcaaaatta 1681 gcttcatctg tttcaacatt aactgattcg ttgtcagatg ctgcatcatc agtttctagg 1741 agttcatcta ttagatcagt aagttcttct gtatcggcat ggactgatgt ttcaaatcaa 1801 ttaacagata tttcaaattc agtaaatagt atatcgacgc aaacatcaac aataagtcgt 1861 cgtttaagat tgaaagaaat tgctactcag acagaaggta tgaattttga tgatatttca 1921 gcagcagtat tgaaaacgaa aatcgataaa tcaacgcaaa ttgcagctaa caatatacca 1981 gatgtgataa cagaagcttc tgaaaaattt ataccgaata gagcatatag agtaatcagc 2041 aatgataacg ttttcgaagc aagtactgat gggcgattct ttgcttataa agtaggaaca 2101 tttgaagaaa taccatttga cgttcaaaaa tttgctgact tagtgacaga ttcaccagtt 2161 atatcggcaa tcatagattt taaaacctta aaaaatctaa acgataacta tggaataacg 2221 agagagcaag ccttcaattt attacgatct gatccaagag ttttgagaga gtttattaat 2281 caggacaatc caataattaa aaataggata gagcaattaa tattacaatg tagattgtga 2341 gcaatttcta gaggatgtga cc // LOCUS KM454498 1579 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 5, complete sequence. ACCESSION KM454498 VERSION KM454498.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 1579) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1579) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1579 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="5" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 12..1508 /note="NSP1" /codon_start=1 /product="nonstructural protein 1" /protein_id="AIZ08932.1" /translation="MKSLVLAMATFKDACFHYRKITKLNRELLRIGANSVWTSVQSNK IKGWCVECCQLTELTYCSGCSLAHVCQLCITNKRCFLDSQPHLLKLRTFESPITKEKL QCVINLYDKLFPINNTIINKFKKSTRQRKCRNGLNETWYNQLLLPITLNAAVFKFKTR TVYVFGFYEGSVSVENLPYRIINCIDIYDRLLLDRINFERMNSLPVSLQSIYAQKYFR VSRIPSMKLRQIYYSDFTKQNLITKHRTKSRIVHRNISKINWNTEIELHNTLTHNKNK ILEILSTSIERQFLVHDINLGRVKADMFELGHQCKPNYVSSNHWQPASKISVCKWCNI KYAFKDMDWRMESMYNELMSFIQACYKSNTNVDHCSSIESIYPIIRNVYWHSTTNYID ETLNKLFSMMNPVCIDSQSVINFHCQIDLSLYLHIKMILEMEVLPFILNVNQFKDIIK GIMNQWCNFSKLSELPLCIESTTTLLELEKQGKLSEEYDLLISDSDDD" ORIGIN 1 ggcttttttt tatgaaaagt cttgtgttag ccatggcgac ttttaaagat gcttgtttcc 61 attatagaaa aatcacaaaa ttaaatagag agttattaag aataggagct aattcagttt 121 ggacatctgt tcaatcaaat aagataaaag ggtggtgcgt tgaatgttgt cagcttactg 181 aattgactta ttgtagtgga tgttcattag cacatgtttg tcaattgtgt attacaaata 241 aaagatgttt tttagatagt caaccacatt tactaaaatt aagaacattt gaatcgccaa 301 ttaccaaaga aaagctacaa tgtgtaatta atttgtatga taagttgttt ccaattaaca 361 atactatcat aaataaattt aagaaatcaa caagacaaag gaaatgcagg aatgggttaa 421 atgagacatg gtataatcaa ctactactac ctataacgtt aaatgcagca gtatttaaat 481 ttaaaacacg cacagtttat gtatttggat tttatgaagg atctgtatca gttgaaaatt 541 taccatatag gataattaac tgtattgaca tttatgatag attactctta gatcgaatta 601 actttgaaag aatgaattca ttacctgtta gtttacagtc aatatatgca caaaagtact 661 ttcgagtaag tagaattcca tcaatgaaat tacggcaaat ttattattca gattttacta 721 agcagaattt gattactaaa catagaacaa aatcgagaat tgtgcacaga aatatttcta 781 aaataaattg gaatacagag attgaattgc ataatacatt aacacataac aagaacaaaa 841 ttttagaaat attatcaaca tcaatagaaa gacaatttct agtacatgat attaatctag 901 ggagagtgaa agcagatatg tttgaattgg gacatcagtg taaaccaaat tacgtttctt 961 ctaatcattg gcaacctgct tcaaaaatat cagtatgcaa atggtgtaac ataaaatatg 1021 catttaaaga tatggattgg agaatggaat caatgtataa tgaactaatg agtttcattc 1081 aagcatgtta taaaagtaat actaacgtag atcattgtag ctcaatagaa agtatatatc 1141 cgataattag aaatgtctat tggcattcaa ctacaaatta tatagatgaa acattaaata 1201 aattatttag tatgatgaat ccagtttgta ttgacagtca aagcgtaata aattttcatt 1261 gtcaaattga tttatcacta tatttgcaca ttaaaatgat tcttgaaatg gaagttctcc 1321 cttttatact taatgttaat cagtttaaag acataattaa aggaataatg aatcagtggt 1381 gcaattttag caagctcagt gaattacctt tatgtatcga atcaacaacc acactactcg 1441 agttagaaaa acaaggaaaa ttatctgaag agtatgattt actaatctca gattcagatg 1501 atgactaatt aataaacata aacttgccat cacaagaccg tctggactag agtagcgcct 1561 agccagcata aaactgtga // LOCUS KM454496 1356 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 6, complete sequence. ACCESSION KM454496 VERSION KM454496.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 1356) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1356) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1356 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="6" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 24..1217 /note="VP6" /codon_start=1 /product="intermediate capsid shell protein" /protein_id="AIZ08930.1" /translation="MEVLYSISKTLKDARDKIVEGTLYSNVSDIIQQFNQMIVTMNGN EFQTGGIGTLPIRNWTFDFGLLGTTLLNLDANYVETARTTIEYFIDFIDNVCMDEMTR ESQRNGIAPQSDALRKLSGIKFKRINFDNSSEYIENWNLQNRRQRTGFVFHKPNIFPY SASFTLNRSQPLHNDLMGTMWLSAGSEIQVAGFDYSCAFNAPANTQQFEHIVQLRRAL TTATITILPDAERFSFPRVINSADGATTWYFNPVILRPNNVEVEFLLDGQIINTYQAR FGTIIARNFDTIRLSFQLMRSPNMTPAVNALFPQAQPFQHHATVGLTLRIDSAVCESV LADSNETMLANVTAVRQEYAVPVGPVLPPGMNWTELITNYSPSREDNLQRVFTVASIR SMLIK" ORIGIN 1 ggctttaaaa cgaagtcttc aacatggaag ttctatattc aatttcaaaa acgcttaaag 61 atgctagaga taaaattgtt gagggtacgc tttattctaa tgttagtgac ataatacagc 121 aattcaatca aatgatagta actatgaatg gaaatgagtt tcagactgga ggcattggta 181 cattaccaat taggaattgg acatttgatt ttggtctatt aggtacaaca ttgttaaatc 241 tagatgctaa ttatgttgaa actgcaagaa caacaataga atattttatt gacttcatag 301 acaatgtatg catggatgaa atgacaagag aatcacaaag aaatggaatt gctcctcaat 361 ccgatgcact acgtaaacta tctggtatta agtttaaaag aattaatttt gataattcat 421 cagaatatat agaaaactgg aatttgcaaa atagaagaca acgtactgga tttgtgttcc 481 ataaaccaaa catatttcca tattctgctt cttttacttt aaacagatca caaccactgc 541 ataatgattt aatgggaact atgtggctaa gtgcaggatc agagatacaa gtcgcaggat 601 ttgattattc atgtgctttt aacgctccag caaatacaca acaatttgaa catatagttc 661 aacttagacg ggcactaaca actgcaacaa taactatatt accagatgca gaaaggttta 721 gttttccaag agtaattaat tcagcagacg gagcaacaac atggtatttt aatccagtaa 781 ttttaagacc aaataatgta gaagtagaat tcctacttga tggacagata attaacacat 841 accaagcacg gtttggcact ataattgcaa gaaattttga cacaatcagg ttgtcgtttc 901 aattaatgcg ttcaccaaat atgacgccag cagttaatgc cttatttcca caagcacaac 961 cgttccagca tcacgccacc gttggactca cactacgtat tgattcggca gtttgtgaat 1021 cagtcttagc ggattcaaat gaaactatgc tagcaaacgt gacagctgta aggcaagaat 1081 atgcagtacc agttggacca gtacttccac caggaatgaa ttggactgaa ttaattacta 1141 attattctcc atcaagagaa gataacttac aacgtgtgtt tacagtagct tccattagaa 1201 gcatgctaat taaatgaaga ccagactaac aatctggtat ccgattttat ttagcatgta 1261 gctatatcaa gttatacaga ctctgcaagt aaggatatat ttatatattc actacgcaga 1321 gtaactgtat gaatgatata gtgagaggat gtgacc // LOCUS KM454500 1066 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 7, complete sequence. ACCESSION KM454500 VERSION KM454500.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 1066) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1066) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1066 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="7" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3 -E2-H7" CDS 25..966 /note="NSP3" /codon_start=1 /product="nonstructural protein 3" /protein_id="AIZ08934.1" /translation="MLKMESTQQMASSIINSSFEAAVVAATSTLELMGIQYDYNEVYT RVKSKFDFVMDDSGVRNNLVGKAVTIDQALNGKFSSAIRNRNWMTDSQTVAKLDEDVN KLRMMLSSKGIDQKMRVLNACFSVKRIPGKSSSIVKCTKLMKNKLERGEVEVDDSFIE EKMETDTIDWKSRYEQLEKRFESLKLRVNEKYNTWVIKARKVNENMNSLQNIISQQQA HINELQMYNNKLERDLQSKIGSVVSSIEWYLRSMELSDDVKSDIEQQLNSIDQLNPVN ALDDFESILRNLISDYDRLFIMFKGLLQQCNYAYTYE" ORIGIN 1 gcttttaatg cttttcagtg gttgatgctc aagatggagt ctactcagca aatggcttct 61 tctataatta actcttcttt cgaggcagca gttgttgctg caacttctac tcttgaactg 121 atgggtattc agtatgatta caatgaggtt tatactagag ttaaaagcaa atttgatttt 181 gttatggacg attccggtgt tagaaacaat ttagtgggta aagctgttac cattgatcaa 241 gctctaaatg gtaaatttag ttcagcaata aggaacagaa attggatgac tgattctcaa 301 actgtagcca aattagatga agacgtcaat aaactaagaa tgatgctttc atcaaaagga 361 attgaccaaa agatgagagt actaaatgcg tgttttagcg ttaagagaat acctggtaag 421 tcatcatcta tagtaaaatg cactaaatta atgaagaata aattagaacg aggtgaagta 481 gaagtagatg attctttcat tgaagaaaaa atggaaacag atactattga ttggaaatca 541 agatatgaac aattagaaaa aagatttgag tcattaaaac ttagagtcaa tgaaaagtac 601 aatacctggg taattaaagc tagaaaagtg aatgaaaata tgaattctct tcaaaatata 661 atctctcaac agcaagcaca tattaacgaa ttgcagatgt acaataataa attggagcgt 721 gatttacagt cgaaaattgg atcagttgta tcatcaattg agtggtatct acgatctatg 781 gaactatctg atgacgttaa atcagatatt gagcaacagc ttaattcaat agaccaattg 841 aatcctgtta acgcattaga tgattttgag tctatactcc gtaatttaat ttctgattat 901 gatagattat tcatcatgtt taaaggattg ttgcagcaat gtaattacgc ttatacttat 961 gaatgaatta aataaaatca ctgtttgcac atgaccctct atgagcacaa tagttaaaag 1021 ctaacactgt caaaaaccta aatggctata ggggcgttat gtgacc // LOCUS KM454499 1059 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 8, complete sequence. ACCESSION KM454499 VERSION KM454499.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 1059) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1059) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1059 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="8" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 47..1000 /note="NSP2" /codon_start=1 /product="NTPase" /protein_id="AIZ08933.1" /translation="MAELACFCYPHLENDSYKFIPFNNLAIKCMLTAKVDKKDQDKFY NSIIYGIAPPPQFKKRYNTNDNSRGMNYETAMFNKVAILICEALNSIKVTQSDVASVL SKVVSVRHLENLVLRRENHQDVLFHSKELLLKSVLIAIGHSKEIETTATAEGGEIVFQ NAAFTMWKLTYLEHKLMPILDQNFIEYKITVNEDKPISESHVKELIAELRWQYNKFAV ITHGKGHYRVVKYSSVANHADRVYATFKSNNKNGNVLEFNLLDQRIIWQNWYAFTSSM KQGNTLDVCKKLLFQKMKRESNPFKGLSTDRKMDEVSQVGI" ORIGIN 1 ggcttttaaa gcgtctcagt cgccgtttga gccttgcggt gtagccatgg ctgagctagc 61 ttgcttttgc tatccccatt tagagaacga tagctataaa ttcattccat ttaataacct 121 tgctataaag tgcatgttga cagcaaaagt agataaaaaa gatcaagata agttttacaa 181 ctcaataatc tatggtattg cgccgccacc acaattcaaa aagcgctata acacaaacga 241 caactcaaga ggaatgaatt atgagactgc aatgtttaat aaggtggcga tattaatttg 301 tgaagcatta aattctatta aagtcacgca atctgatgtt gcaagtgtac tttcaaaagt 361 agtttccgta agacatcttg agaatttagt attgagaaga gaaaaccacc aggacgttct 421 ttttcactcg aaagagctac tacttaaatc agttttaata gctattggtc attcaaagga 481 gattgaaaca actgctactg ctgaaggagg agaaatcgtt tttcaaaatg cagcatttac 541 gatgtggaag ttgacatatc tggagcataa gctaatgcca attcttgatc aaaattttat 601 tgaatataaa attacagtaa atgaagataa accaatttca gagtcacacg taaaagaact 661 tattgctgaa ttgcggtggc aatataataa atttgcagta attacacatg gtaaaggtca 721 ctacagagtt gtgaaatact cgtcagttgc gaatcacgca gaccgagttt acgctacttt 781 caagagtaat aacaagaacg gaaatgtact agaatttaac ttacttgacc aaagaataat 841 atggcagaat tggtacgcat tcacgtcctc aatgaaacaa ggtaacactc ttgatgtatg 901 taaaaaactg ctctttcaga aaatgaaacg agaaagtaat ccatttaagg gactgtcaac 961 tgatagaaag atggatgaag tttctcaagt aggaatttaa ttcgttatct gtttgaaagt 1021 gggtatggcg gagtaagaat tgaaagcgct tatgtgacc // LOCUS KM454497 1059 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 9, complete sequence. ACCESSION KM454497 VERSION KM454497.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 1059) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1059) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1059 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="9" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3-E2-H7" CDS 45..1025 /note="VP7" /codon_start=1 /product="outer-shell Glycoprotein" /protein_id="AIZ08931.1" /translation="MYGIEYTTVLTFLISFILLNYILKSLTIMMDFIIYRFLFIIVVL SPLLNAQNYGINLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAVAEINDNSWKDTI SQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYNETLQLDMSELADLIL NEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTTTFEEV ATAEKLVITDVVDGVNHKLDVTTSTCTIRNCKKLGPRENVAVIQIGGSDILDITADPT TAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSKRSRSLNSAAFYYRV" ORIGIN 1 ttaaaagaga gaatttccgt ctggctagcg gttagctcct tttaatgtat ggtattgaat 61 ataccacagt tctaaccttt ttgatatcat ttattttatt gaattatata ctgaaatctt 121 taactataat gatggacttc attatttata gattcctttt cattatagtc gtcttgtcac 181 cattattaaa tgctcaaaat tacggaatta atctgccaat cactggttca atggacactg 241 catatgctaa ttctacacaa gaagaaacat ttcttacatc tactttatgt ctatattatc 301 ctactgaagc tgtagcagaa ataaatgata actcatggaa agatacgatc tcacaactat 361 ttctaactaa aggatggcct actggatccg tttattttaa agagtacaca gatattgcat 421 ctttttcagt tgatccgcaa ttatattgtg attataacgt ggtattaatg aaatacaatg 481 aaacactaca gttggatatg tctgaattgg ctgatttaat attgaatgaa tggttatgca 541 atccaatgga cattactctg tattattatc agcagacaga cgaagctaat aaatggattt 601 ccatgggatc ttcatgtaca atcaaagtat gtccacttaa tacacaaact ctaggaattg 661 gatgtttgac caccgataca acgacattcg aagaggttgc gacggctgaa aaactagtaa 721 taactgatgt tgttgatgga gtcaatcata aacttgatgt taccacatct acttgtacta 781 ttaggaattg taaaaaattg ggaccacgag aaaatgtagc tgtgattcaa attggaggtt 841 ctgatatact tgatataacg gctgatccaa ctacagcacc acaaactgag aggatgatgc 901 gtattaattg gaagaaatgg tggcaagtgt tctacactgt agttgattat gtgaatcaga 961 taattcaagc aatgtccaaa agatcacggt cattaaattc tgctgcgttt tactacagag 1021 tttaggtata gcttagatta gaattgtatg atgtgacca // LOCUS KM454501 752 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 10, complete sequence. ACCESSION KM454501 VERSION KM454501.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 752) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 752) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..752 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="10" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3 -E2-H7" CDS 42..569 /note="NSP4" /codon_start=1 /product="enterotoxin" /protein_id="AIZ08935.1" /translation="MEKLTDLNYTLSVITLMNNTLHTILEDPGMAYFPYIASVLTVLF MLHKASIPTMKIALKTSKCSYKVVKYCIVTILNTLLKLAGYKEQITTKDEIEKQMDRV VKEMRRQLEMIDKLTTREIEQVELLKCIYDKLMIRTADEIDMTKEINQKNVRTLKEWE NGKNPYEPKEVTAAM" ORIGIN 1 ggcttttaaa agttctgttc cgagagagcg cgtgcggaaa gatggaaaag cttaccgacc 61 tcaactatac attgagtgta atcactctaa tgaacaacac attgcacacg atacttgaag 121 atccagggat ggcgtatttt ccttatatag catctgtctt gacagttttg tttatgttgc 181 acaaagcatc cattccaaca atgaaaattg cactaaagac gtccaaatgt tcatataaag 241 tggtgaagta ttgtattgta acaattttaa atacgttgtt gaaattagca ggttataaag 301 aacagattac tactaaagac gagatagaaa aacaaatgga cagagtagtc aaagagatga 361 gacgtcagct agaaatgatt gataagttga ctacacgtga aattgaacag gtggaattgt 421 tgaaatgtat ttacgataaa ttgatgatac gaacagcaga cgagatagat atgacgaaag 481 aaatcaacca aaagaacgta agaacgctta aagaatggga aaatggaaag aatccttatg 541 aaccaaaaga agtgactgca gcaatgtaag aggttgagct gccgtcgact gtcttcggaa 601 gcggcggagt tctttacagt aagccccatc ggacctgatg attgactgag aagccacagt 661 cagtcatatc gcgtgtggct taagccttaa tcccgtttaa ccaattcggt cagcaccgga 721 cgttaatgga aaggaatggt cttaatgtga cc // LOCUS KM454502 666 bp RNA linear VRL 09-FEB-2015 DEFINITION Equine rotavirus A strain H2 segment 11, complete sequence. ACCESSION KM454502 VERSION KM454502.1 KEYWORDS . SOURCE Equine rotavirus A ORGANISM Equine rotavirus A Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. REFERENCE 1 (bases 1 to 666) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Cloning and nucleotide sequence analyses of 11 genome segments of two American and one British equine rotavirus strains JOURNAL Vet. Microbiol. (2015) In press PUBMED 25631250 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 666) AUTHORS Ma,Y., Wen,X., Hoshino,Y. and Yuan,L. TITLE Direct Submission JOURNAL Submitted (02-SEP-2014) Department of Biochemistry and Molecular Biology, Molecular Medicine and Cancer Research Center, Chongqing Medical University, 1 Yuzhong District Yixueyuan Rd, Chongqing, Chongqing 400016, P.R. China COMMENT GenBank Accession Numbers KM454492-KM454502 represent the complete genome of Equine rotavirus A strain H2. ##Assembly-Data-START## Assembly Method :: Sequencher 4.7 v v. Sequencher 4.7 v Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..666 /organism="Equine rotavirus A" /mol_type="genomic RNA" /strain="H2" /host="horse" /db_xref="taxon:31590" /segment="11" /country="United Kingdom" /collection_date="1976" /note="genotype: G3-P[12]-I6-R2-C2-M3-A10-N2-T3 -E2-H7" CDS 21..617 /note="NSP5" /codon_start=1 /product="nonstructural protein5" /protein_id="AIZ08936.1" /translation="MSLSIDVTSLPSISSSIYKHDSSPTTSTLSGKSISRSEQYISPD TEAFNKYMLSKSPEDIGPSDSASNDPLTSFSIKSHAVKTNADTGVSMDSSNQSRPSSN VGCDQVDFSLNKGLKINANLDSSISISTSRKKEINNDQKEKKQRHPKIEADSDSDNYV LDDSDSDDGKCKNCKYKKKYFILRMRMKQVAMQLIEDL" ORIGIN 1 ggcttttaaa cgctacagtg atgtctctca gtattgacgt gacgagtctt ccttcaatct 61 catctagtat ctataaacat gattcatctc caacaacgtc gactctttct ggaaaatcta 121 ttagtaggag tgaacaatac atttcaccag ataccgaggc attcaataaa tacatgctgt 181 caaaatctcc agaggacatt ggaccatctg attctgcttc aaacgatcca ctcaccagtt 241 tctcgattaa atcgcatgca gttaagacaa atgcagatac tggtgtatct atggattcat 301 caaatcaatc acgaccttca agcaatgtcg gatgtgacca agtagatttc tcattaaata 361 aaggtcttaa aattaatgcc aatttagatt catctatttc catatcaaca agtcgtaaaa 421 aagaaattaa taatgatcaa aaagagaaaa agcaacgaca ccctaaaata gaagcagatt 481 cggattcaga taattacgta cttgatgact ctgatagtga tgacggaaaa tgtaaaaatt 541 gtaaatataa aaagaaatat tttatattga gaatgagaat gaagcaagtc gcgatgcaat 601 taattgaaga cttgtaactc tagtctgaga gaccactagg gagctcccca ctcccgtttt 661 gtgacc //