locus-tag class description D9E17_00005 PF11638 DnaA N-terminal domain D9E17_00005 PF08299 Bacterial dnaA protein helix-turn-helix D9E17_00005 PF00308 Bacterial dnaA protein D9E17_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D9E17_00010 PF02767 DNA polymerase III beta subunit, central domain D9E17_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D9E17_00015 PF02463 RecF/RecN/SMC N terminal domain D9E17_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_00020 PF00986 DNA gyrase B subunit, carboxyl terminus D9E17_00020 PF18053 DNA gyrase B subunit insert domain D9E17_00020 PF01751 Toprim domain D9E17_00020 PF00204 DNA gyrase B D9E17_00025 PF06078 Bacterial protein of unknown function (DUF937) D9E17_00040 PF07729 FCD domain D9E17_00040 PF00392 Bacterial regulatory proteins, gntR family D9E17_00045 PF05035 2-keto-3-deoxy-galactonokinase D9E17_00050 PF01081 KDPG and KHG aldolase D9E17_00055 PF13378 Enolase C-terminal domain-like D9E17_00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9E17_00060 PF07690 Major Facilitator Superfamily D9E17_00065 PF01494 FAD binding domain D9E17_00070 PF12566 Protein of unknown function (DUF3748) D9E17_00070 PF07676 WD40-like Beta Propeller Repeat D9E17_00075 PF07119 Protein of unknown function (DUF1375) D9E17_00080 PF00011 Hsp20/alpha crystallin family D9E17_00085 PF00011 Hsp20/alpha crystallin family D9E17_00090 PF06826 Predicted Permease Membrane Region D9E17_00090 PF02080 TrkA-C domain D9E17_00095 PF00392 Bacterial regulatory proteins, gntR family D9E17_00095 PF07702 UTRA domain D9E17_00120 PF07282 Putative transposase DNA-binding domain D9E17_00120 PF12323 Helix-turn-helix domain D9E17_00120 PF01385 Probable transposase D9E17_00125 PF02656 Domain of unknown function (DUF202) D9E17_00130 PF02656 Domain of unknown function (DUF202) D9E17_00140 PF07690 Major Facilitator Superfamily D9E17_00145 PF13939 Toxin TisB, type I toxin-antitoxin system D9E17_00150 PF08049 IlvB leader peptide D9E17_00155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_00155 PF00205 Thiamine pyrophosphate enzyme, central domain D9E17_00155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9E17_00160 PF01842 ACT domain D9E17_00165 PF00072 Response regulator receiver domain D9E17_00165 PF00196 Bacterial regulatory proteins, luxR family D9E17_00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_00170 PF07730 Histidine kinase D9E17_00170 PF05231 MASE1 D9E17_00175 PF07690 Major Facilitator Superfamily D9E17_00180 PF07690 Major Facilitator Superfamily D9E17_00185 PF13382 Adenine deaminase C-terminal domain D9E17_00185 PF01979 Amidohydrolase family D9E17_00190 PF00860 Permease family D9E17_00195 PF06711 Protein of unknown function (DUF1198) D9E17_00200 PF07690 Major Facilitator Superfamily D9E17_00210 PF03180 NLPA lipoprotein D9E17_00215 PF00892 EamA-like transporter family D9E17_00220 PF07690 Major Facilitator Superfamily D9E17_00240 PF01055 Glycosyl hydrolases family 31 D9E17_00240 PF13802 Galactose mutarotase-like D9E17_00245 PF05170 AsmA family D9E17_00250 PF00860 Permease family D9E17_00255 PF03616 Sodium/glutamate symporter D9E17_00260 PF00271 Helicase conserved C-terminal domain D9E17_00260 PF17191 RecG wedge domain D9E17_00260 PF00270 DEAD/DEAH box helicase D9E17_00265 PF12105 SpoU, rRNA methylase, C-terminal D9E17_00265 PF00588 SpoU rRNA Methylase family D9E17_00270 PF02824 TGS domain D9E17_00270 PF13291 ACT domain D9E17_00270 PF04607 Region found in RelA / SpoT proteins D9E17_00275 PF01192 RNA polymerase Rpb6 D9E17_00280 PF00625 Guanylate kinase D9E17_00285 PF01653 NAD-dependent DNA ligase adenylation domain D9E17_00285 PF03120 NAD-dependent DNA ligase OB-fold domain D9E17_00290 PF03458 UPF0126 domain D9E17_00300 PF03755 YicC-like family, N-terminal region D9E17_00300 PF08340 Domain of unknown function (DUF1732) D9E17_00305 PF03725 3' exoribonuclease family, domain 2 D9E17_00305 PF01138 3' exoribonuclease family, domain 1 D9E17_00310 PF00156 Phosphoribosyl transferase domain D9E17_00315 PF00440 Bacterial regulatory proteins, tetR family D9E17_00320 PF00692 dUTPase D9E17_00325 PF04127 DNA / pantothenate metabolism flavoprotein D9E17_00325 PF02441 Flavoprotein D9E17_00330 PF04002 RadC-like JAB domain D9E17_00335 PF00830 Ribosomal L28 family D9E17_00340 PF00471 Ribosomal protein L33 D9E17_00345 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D9E17_00345 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D9E17_00345 PF06827 Zinc finger found in FPG and IleRS D9E17_00350 PF01467 Cytidylyltransferase-like D9E17_00355 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D9E17_00360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D9E17_00365 PF13439 Glycosyltransferase Family 4 D9E17_00365 PF00534 Glycosyl transferases group 1 D9E17_00375 PF01501 Glycosyl transferase family 8 D9E17_00375 PF08437 Glycosyl transferase family 8 C-terminal D9E17_00380 PF08437 Glycosyl transferase family 8 C-terminal D9E17_00380 PF01501 Glycosyl transferase family 8 D9E17_00385 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) D9E17_00390 PF08437 Glycosyl transferase family 8 C-terminal D9E17_00390 PF01501 Glycosyl transferase family 8 D9E17_00395 PF00535 Glycosyl transferase family 2 D9E17_00400 PF04932 O-Antigen ligase D9E17_00405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D9E17_00410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D9E17_00415 PF01370 NAD dependent epimerase/dehydratase family D9E17_00420 PF00155 Aminotransferase class I and II D9E17_00425 PF00107 Zinc-binding dehydrogenase D9E17_00425 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_00430 PF00535 Glycosyl transferase family 2 D9E17_00435 PF04748 Divergent polysaccharide deacetylase D9E17_00440 PF01551 Peptidase family M23 D9E17_00445 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D9E17_00445 PF01676 Metalloenzyme superfamily D9E17_00450 PF00581 Rhodanese-like domain D9E17_00455 PF00462 Glutaredoxin D9E17_00460 PF02556 Preprotein translocase subunit SecB D9E17_00465 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D9E17_00465 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D9E17_00470 PF06426 Serine acetyltransferase, N-terminal D9E17_00470 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_00475 PF00588 SpoU rRNA Methylase family D9E17_00480 PF01070 FMN-dependent dehydrogenase D9E17_00485 PF00392 Bacterial regulatory proteins, gntR family D9E17_00485 PF07729 FCD domain D9E17_00490 PF02652 L-lactate permease D9E17_00495 PF05658 Head domain of trimeric autotransporter adhesin D9E17_00495 PF05662 Coiled stalk of trimeric autotransporter adhesin D9E17_00495 PF13018 Extended Signal Peptide of Type V secretion system D9E17_00495 PF03895 YadA-like membrane anchor domain D9E17_00500 PF11622 Protein of unknown function (DUF3251) D9E17_00510 PF10928 Protein of unknown function (DUF2810) D9E17_00520 PF05068 Mannitol repressor D9E17_00525 PF08125 Mannitol dehydrogenase C-terminal domain D9E17_00525 PF01232 Mannitol dehydrogenase Rossmann domain D9E17_00530 PF02378 Phosphotransferase system, EIIC D9E17_00530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_00530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_00535 PF11742 Protein of unknown function (DUF3302) D9E17_00540 PF00529 HlyD membrane-fusion protein of T1SS D9E17_00540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_00545 PF15596 Immunity protein 57 D9E17_00565 PF03527 RHS protein D9E17_00570 PF03130 PBS lyase HEAT-like repeat D9E17_00575 PF05593 RHS Repeat D9E17_00575 PF03527 RHS protein D9E17_00575 PF15606 Bacterial toxin 34 D9E17_00580 PF00043 Glutathione S-transferase, C-terminal domain D9E17_00580 PF13417 Glutathione S-transferase, N-terminal domain D9E17_00585 PF12390 Selenocysteine synthase N terminal D9E17_00585 PF03841 L-seryl-tRNA selenium transferase D9E17_00590 PF09107 Elongation factor SelB, winged helix D9E17_00590 PF09106 Elongation factor SelB, winged helix D9E17_00590 PF03144 Elongation factor Tu domain 2 D9E17_00590 PF00009 Elongation factor Tu GTP binding domain D9E17_00595 PF00465 Iron-containing alcohol dehydrogenase D9E17_00600 PF00171 Aldehyde dehydrogenase family D9E17_00610 PF11742 Protein of unknown function (DUF3302) D9E17_00615 PF00529 HlyD membrane-fusion protein of T1SS D9E17_00615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_00620 PF03466 LysR substrate binding domain D9E17_00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_00625 PF06629 MltA-interacting protein MipA D9E17_00630 PF07944 Beta-L-arabinofuranosidase, GH127 D9E17_00645 PF00596 Class II Aldolase and Adducin N-terminal domain D9E17_00650 PF01261 Xylose isomerase-like TIM barrel D9E17_00655 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D9E17_00660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9E17_00660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9E17_00665 PF03480 Bacterial extracellular solute-binding protein, family 7 D9E17_00670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D9E17_00675 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D9E17_00680 PF04074 YhcH/YjgK/YiaL D9E17_00685 PF02615 Malate/L-lactate dehydrogenase D9E17_00690 PF01614 Bacterial transcriptional regulator D9E17_00690 PF09339 IclR helix-turn-helix domain D9E17_00695 PF13247 4Fe-4S dicluster domain D9E17_00700 PF00155 Aminotransferase class I and II D9E17_00705 PF00128 Alpha amylase, catalytic domain D9E17_00710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9E17_00715 PF12833 Helix-turn-helix domain D9E17_00720 PF02653 Branched-chain amino acid transport system / permease component D9E17_00725 PF00005 ABC transporter D9E17_00730 PF13407 Periplasmic binding protein domain D9E17_00740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9E17_00740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9E17_00745 PF05360 yiaA/B two helix domain D9E17_00750 PF05360 yiaA/B two helix domain D9E17_00755 PF01757 Acyltransferase family D9E17_00760 PF13983 YsaB-like lipoprotein D9E17_00765 PF02091 Glycyl-tRNA synthetase alpha subunit D9E17_00770 PF05746 DALR anticodon binding domain D9E17_00770 PF02092 Glycyl-tRNA synthetase beta subunit D9E17_00780 PF01848 Hok/gef family D9E17_00785 PF00313 'Cold-shock' DNA-binding domain D9E17_00790 PF01381 Helix-turn-helix D9E17_00795 PF11254 Protein of unknown function (DUF3053) D9E17_00800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9E17_00800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9E17_00805 PF13488 Glycine zipper D9E17_00805 PF00691 OmpA family D9E17_00810 PF01568 Molydopterin dinucleotide binding domain D9E17_00810 PF18364 Molybdopterin oxidoreductase N-terminal domain D9E17_00810 PF00384 Molybdopterin oxidoreductase D9E17_00815 PF00583 Acetyltransferase (GNAT) family D9E17_00820 PF03352 Methyladenine glycosylase D9E17_00825 PF03797 Autotransporter beta-domain D9E17_00830 PF07690 Major Facilitator Superfamily D9E17_00835 PF00884 Sulfatase D9E17_00835 PF08019 Phosphoethanolamine transferase EptA/EptB D9E17_00845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_00855 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_00860 PF12911 N-terminal TM domain of oligopeptide transport permease C D9E17_00860 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_00865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_00865 PF00005 ABC transporter D9E17_00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_00870 PF00005 ABC transporter D9E17_00875 PF03222 Tryptophan/tyrosine permease family D9E17_00885 PF13940 Toxin Ldr, type I toxin-antitoxin system D9E17_00890 PF11658 Cellulose biosynthesis protein BcsG D9E17_00895 PF11120 Cellulose biosynthesis protein BcsF D9E17_00900 PF10995 Cellulose biosynthesis GIL D9E17_00910 PF10995 Cellulose biosynthesis GIL D9E17_00915 PF10945 Cellulose biosynthesis protein BcsR D9E17_00920 PF06564 Cellulose biosynthesis protein BcsQ D9E17_00925 PF03552 Cellulose synthase D9E17_00925 PF00535 Glycosyl transferase family 2 D9E17_00925 PF07238 PilZ domain D9E17_00940 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D9E17_00945 PF00990 Diguanylate cyclase, GGDEF domain D9E17_00945 PF00672 HAMP domain D9E17_00945 PF17154 Gammaproteobacterial periplasmic sensor domain D9E17_00945 PF00563 EAL domain D9E17_00950 PF00375 Sodium:dicarboxylate symporter family D9E17_00955 PF00675 Insulinase (Peptidase family M16) D9E17_00955 PF05193 Peptidase M16 inactive domain D9E17_00960 PF00294 pfkB family carbohydrate kinase D9E17_00965 PF00563 EAL domain D9E17_00970 PF05170 AsmA family D9E17_00975 PF00083 Sugar (and other) transporter D9E17_00975 PF07690 Major Facilitator Superfamily D9E17_00980 PF03631 Virulence factor BrkB D9E17_00985 PF03466 LysR substrate binding domain D9E17_00985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_00990 PF00196 Bacterial regulatory proteins, luxR family D9E17_00995 PF01204 Trehalase D9E17_01025 PF00282 Pyridoxal-dependent decarboxylase conserved domain D9E17_01035 PF12833 Helix-turn-helix domain D9E17_01040 PF12833 Helix-turn-helix domain D9E17_01045 PF00873 AcrB/AcrD/AcrF family D9E17_01050 PF00529 HlyD membrane-fusion protein of T1SS D9E17_01050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_01060 PF00196 Bacterial regulatory proteins, luxR family D9E17_01065 PF03729 Short repeat of unknown function (DUF308) D9E17_01070 PF06411 HdeA/HdeB family D9E17_01075 PF06411 HdeA/HdeB family D9E17_01080 PF02308 MgtC family D9E17_01085 PF00196 Bacterial regulatory proteins, luxR family D9E17_01090 PF03843 Outer membrane lipoprotein Slp family D9E17_01100 PF03960 ArsC family D9E17_01105 PF02040 Arsenical pump membrane protein D9E17_01110 PF01022 Bacterial regulatory protein, arsR family D9E17_01120 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_01120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9E17_01125 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D9E17_01130 PF01432 Peptidase family M3 D9E17_01135 PF04445 Putative SAM-dependent methyltransferase D9E17_01140 PF00854 POT family D9E17_01145 PF00582 Universal stress protein family D9E17_01150 PF10625 Universal stress protein B (UspB) D9E17_01155 PF01384 Phosphate transporter family D9E17_01195 PF13401 AAA domain D9E17_01195 PF11426 Tn7 transposition regulator TnsC D9E17_01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_01230 PF00512 His Kinase A (phospho-acceptor) domain D9E17_01230 PF00672 HAMP domain D9E17_01235 PF00072 Response regulator receiver domain D9E17_01235 PF00486 Transcriptional regulatory protein, C terminal D9E17_01240 PF02321 Outer membrane efflux protein D9E17_01245 PF11604 Copper binding periplasmic protein CusF D9E17_01250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_01255 PF00873 AcrB/AcrD/AcrF family D9E17_01265 PF04945 YHS domain D9E17_01275 PF08525 Opacity-associated protein A N-terminal motif D9E17_01275 PF01551 Peptidase family M23 D9E17_01275 PF01476 LysM domain D9E17_01285 PF00394 Multicopper oxidase D9E17_01285 PF07732 Multicopper oxidase D9E17_01285 PF07731 Multicopper oxidase D9E17_01290 PF05275 Copper resistance protein B precursor (CopB) D9E17_01295 PF04234 CopC domain D9E17_01300 PF05425 Copper resistance protein D D9E17_01305 PF00072 Response regulator receiver domain D9E17_01305 PF00486 Transcriptional regulatory protein, C terminal D9E17_01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_01310 PF00672 HAMP domain D9E17_01310 PF00512 His Kinase A (phospho-acceptor) domain D9E17_01320 PF10951 Protein of unknown function (DUF2776) D9E17_01330 PF13258 Domain of unknown function (DUF4049) D9E17_01335 PF13533 Biotin-lipoyl like D9E17_01340 PF00005 ABC transporter D9E17_01350 PF01609 Transposase DDE domain D9E17_01350 PF13808 DDE_Tnp_1-associated D9E17_01355 PF03130 PBS lyase HEAT-like repeat D9E17_01360 PF15631 NTF2 fold immunity protein D9E17_01365 PF05593 RHS Repeat D9E17_01365 PF14220 Domain of unknown function (DUF4329) D9E17_01365 PF03527 RHS protein D9E17_01370 PF01402 Ribbon-helix-helix protein, copG family D9E17_01370 PF08753 NikR C terminal nickel binding domain D9E17_01375 PF00005 ABC transporter D9E17_01380 PF00005 ABC transporter D9E17_01385 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_01390 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_01395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_01400 PF01648 4'-phosphopantetheinyl transferase superfamily D9E17_01405 PF01594 AI-2E family transporter D9E17_01410 PF07690 Major Facilitator Superfamily D9E17_01415 PF08786 DcrB D9E17_01420 PF02592 Putative vitamin uptake transporter D9E17_01425 PF01206 Sulfurtransferase TusA D9E17_01430 PF00403 Heavy-metal-associated domain D9E17_01435 PF07947 YhhN family D9E17_01440 PF10694 Protein of unknown function (DUF2500) D9E17_01445 PF06611 Protein of unknown function (DUF1145) D9E17_01455 PF02881 SRP54-type protein, helical bundle domain D9E17_01455 PF00448 SRP54-type protein, GTPase domain D9E17_01460 PF00005 ABC transporter D9E17_01465 PF02687 FtsX-like permease family D9E17_01465 PF18075 FtsX extracellular domain D9E17_01470 PF04542 Sigma-70 region 2 D9E17_01470 PF04545 Sigma-70, region 4 D9E17_01475 PF13458 Periplasmic binding protein D9E17_01480 PF12568 Acetyltransferase (GNAT) domain, PanZ D9E17_01485 PF13458 Periplasmic binding protein D9E17_01490 PF02653 Branched-chain amino acid transport system / permease component D9E17_01495 PF02653 Branched-chain amino acid transport system / permease component D9E17_01495 PF11862 Domain of unknown function (DUF3382) D9E17_01500 PF12399 Branched-chain amino acid ATP-binding cassette transporter D9E17_01500 PF00005 ABC transporter D9E17_01505 PF00005 ABC transporter D9E17_01510 PF13416 Bacterial extracellular solute-binding protein D9E17_01515 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_01520 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_01525 PF00005 ABC transporter D9E17_01525 PF17912 MalK OB fold domain D9E17_01530 PF03009 Glycerophosphoryl diester phosphodiesterase family D9E17_01535 PF10956 Protein of unknown function (DUF2756) D9E17_01545 PF15567 Immunity protein 35 D9E17_01565 PF05638 Type VI secretion system effector, Hcp D9E17_01570 PF00583 Acetyltransferase (GNAT) family D9E17_01575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9E17_01575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9E17_01580 PF02678 Pirin D9E17_01580 PF17954 Quercetinase C-terminal cupin domain D9E17_01585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9E17_01585 PF00356 Bacterial regulatory proteins, lacI family D9E17_01590 PF01202 Shikimate kinase D9E17_01595 PF02447 GntP family permease D9E17_01600 PF01914 MarC family integral membrane protein D9E17_01605 PF02774 Semialdehyde dehydrogenase, dimerisation domain D9E17_01605 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9E17_01610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D9E17_01610 PF00128 Alpha amylase, catalytic domain D9E17_01610 PF02806 Alpha amylase, C-terminal all-beta domain D9E17_01615 PF00128 Alpha amylase, catalytic domain D9E17_01615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D9E17_01615 PF18390 Glycogen debranching enzyme C-terminal domain D9E17_01620 PF00483 Nucleotidyl transferase D9E17_01625 PF08323 Starch synthase catalytic domain D9E17_01625 PF00534 Glycosyl transferases group 1 D9E17_01630 PF00343 Carbohydrate phosphorylase D9E17_01655 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D9E17_01655 PF01266 FAD dependent oxidoreductase D9E17_01660 PF00581 Rhodanese-like domain D9E17_01665 PF01694 Rhomboid family D9E17_01665 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D9E17_01670 PF00455 DeoR C terminal sensor domain D9E17_01670 PF08220 DeoR-like helix-turn-helix domain D9E17_01675 PF00158 Sigma-54 interaction domain D9E17_01675 PF06956 Regulator of RNA terminal phosphate cyclase D9E17_01680 PF01139 tRNA-splicing ligase RtcB D9E17_01690 PF17874 MalT-like TPR region D9E17_01690 PF00196 Bacterial regulatory proteins, luxR family D9E17_01695 PF00343 Carbohydrate phosphorylase D9E17_01700 PF02446 4-alpha-glucanotransferase D9E17_01705 PF02447 GntP family permease D9E17_01710 PF01106 NifU-like domain D9E17_01710 PF01521 Iron-sulphur cluster biosynthesis D9E17_01715 PF00156 Phosphoribosyl transferase domain D9E17_01720 PF00561 alpha/beta hydrolase fold D9E17_01725 PF04754 Putative transposase, YhgA-like D9E17_01730 PF09012 FeoC like transcriptional regulator D9E17_01735 PF07664 Ferrous iron transport protein B C terminus D9E17_01735 PF07670 Nucleoside recognition D9E17_01735 PF02421 Ferrous iron transport protein B D9E17_01735 PF17910 FeoB cytosolic helical domain D9E17_01740 PF04023 FeoA domain D9E17_01745 PF09371 Tex-like protein N-terminal domain D9E17_01745 PF16921 Tex protein YqgF-like domain D9E17_01745 PF00575 S1 RNA binding domain D9E17_01745 PF17674 HHH domain D9E17_01750 PF03449 Transcription elongation factor, N-terminal D9E17_01750 PF01272 Transcription elongation factor, GreA/GreB, C-term D9E17_01755 PF00072 Response regulator receiver domain D9E17_01755 PF00486 Transcriptional regulatory protein, C terminal D9E17_01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_01760 PF00512 His Kinase A (phospho-acceptor) domain D9E17_01760 PF00672 HAMP domain D9E17_01765 PF01293 Phosphoenolpyruvate carboxykinase D9E17_01770 PF13687 Domain of unknown function (DUF4153) D9E17_01775 PF01430 Hsp33 protein D9E17_01780 PF01479 S4 domain D9E17_01785 PF13419 Haloacid dehalogenase-like hydrolase D9E17_01790 PF07095 Intracellular growth attenuator protein IgaA D9E17_01795 PF00293 NUDIX domain D9E17_01800 PF00912 Transglycosylase D9E17_01800 PF17092 Penicillin-binding protein OB-like domain D9E17_01800 PF00905 Penicillin binding protein transpeptidase domain D9E17_01810 PF05137 Fimbrial assembly protein (PilN) D9E17_01820 PF10748 DNA utilization proteins HofP D9E17_01825 PF00263 Bacterial type II and III secretion system protein D9E17_01825 PF03958 Bacterial type II/III secretion system short domain D9E17_01830 PF01202 Shikimate kinase D9E17_01835 PF01761 3-dehydroquinate synthase D9E17_01840 PF05036 Sporulation related domain D9E17_01845 PF02086 D12 class N6 adenine-specific DNA methyltransferase D9E17_01850 PF00834 Ribulose-phosphate 3 epimerase family D9E17_01855 PF13419 Haloacid dehalogenase-like hydrolase D9E17_01860 PF00579 tRNA synthetases class I (W and Y) D9E17_01870 PF14503 YhfZ C-terminal domain D9E17_01870 PF14502 Helix-turn-helix domain D9E17_01880 PF01168 Alanine racemase, N-terminal domain D9E17_01885 PF01676 Metalloenzyme superfamily D9E17_01890 PF02126 Phosphotriesterase family D9E17_01895 PF10941 Protein of unknown function DUF2620 D9E17_01900 PF10797 Protein of unknown function D9E17_01905 PF00155 Aminotransferase class I and II D9E17_01910 PF00392 Bacterial regulatory proteins, gntR family D9E17_01910 PF07702 UTRA domain D9E17_01915 PF00294 pfkB family carbohydrate kinase D9E17_01920 PF01261 Xylose isomerase-like TIM barrel D9E17_01925 PF01380 SIS domain D9E17_01930 PF13520 Amino acid permease D9E17_01935 PF13978 Protein of unknown function (DUF4223) D9E17_01940 PF14824 Sirohaem biosynthesis protein central D9E17_01940 PF10414 Sirohaem synthase dimerisation region D9E17_01940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9E17_01945 PF01226 Formate/nitrite transporter D9E17_01950 PF13806 Rieske-like [2Fe-2S] domain D9E17_01955 PF04324 BFD-like [2Fe-2S] binding domain D9E17_01955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9E17_01955 PF18267 Rubredoxin NAD+ reductase C-terminal domain D9E17_01955 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_01955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D9E17_01960 PF07690 Major Facilitator Superfamily D9E17_01965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D9E17_01970 PF10832 Protein of unknown function (DUF2559) D9E17_01975 PF02661 Fic/DOC family D9E17_01980 PF00117 Glutamine amidotransferase class-I D9E17_01985 PF00202 Aminotransferase class-III D9E17_01990 PF12805 FUSC-like inner membrane protein yccS D9E17_01995 PF00027 Cyclic nucleotide-binding domain D9E17_01995 PF13545 Crp-like helix-turn-helix domain D9E17_02000 PF02566 OsmC-like protein D9E17_02005 PF00485 Phosphoribulokinase / Uridine kinase family D9E17_02010 PF06794 Uncharacterised protein family (UPF0270) D9E17_02015 PF00561 alpha/beta hydrolase fold D9E17_02020 PF00005 ABC transporter D9E17_02020 PF12848 ABC transporter D9E17_02025 PF02525 Flavodoxin-like fold D9E17_02030 PF00999 Sodium/hydrogen exchanger family D9E17_02030 PF02254 TrkA-N domain D9E17_02035 PF09526 Probable metal-binding protein (DUF2387) D9E17_02040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D9E17_02045 PF04102 SlyX D9E17_02050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D9E17_02050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D9E17_02055 PF13309 HTH domain D9E17_02055 PF08348 YheO-like PAS domain D9E17_02060 PF02635 DsrE/DsrF-like family D9E17_02065 PF02635 DsrE/DsrF-like family D9E17_02070 PF04077 DsrH like protein D9E17_02075 PF00164 Ribosomal protein S12/S23 D9E17_02080 PF00177 Ribosomal protein S7p/S5e D9E17_02085 PF00679 Elongation factor G C-terminus D9E17_02085 PF14492 Elongation Factor G, domain II D9E17_02085 PF03764 Elongation factor G, domain IV D9E17_02085 PF00009 Elongation factor Tu GTP binding domain D9E17_02085 PF03144 Elongation factor Tu domain 2 D9E17_02090 PF03143 Elongation factor Tu C-terminal domain D9E17_02090 PF03144 Elongation factor Tu domain 2 D9E17_02090 PF00009 Elongation factor Tu GTP binding domain D9E17_02095 PF02839 Carbohydrate binding domain D9E17_02100 PF04324 BFD-like [2Fe-2S] binding domain D9E17_02105 PF00210 Ferritin-like domain D9E17_02110 PF01478 Type IV leader peptidase family D9E17_02115 PF04612 Type II secretion system (T2SS), protein M D9E17_02120 PF05134 Type II secretion system (T2SS), protein L D9E17_02120 PF12693 GspL periplasmic domain D9E17_02125 PF03934 Type II secretion system (T2SS), protein K D9E17_02130 PF07963 Prokaryotic N-terminal methylation motif D9E17_02130 PF11612 Type II secretion system (T2SS), protein J D9E17_02135 PF02501 Type II secretion system (T2SS), protein I D9E17_02135 PF07963 Prokaryotic N-terminal methylation motif D9E17_02140 PF12019 Type II transport protein GspH D9E17_02140 PF07963 Prokaryotic N-terminal methylation motif D9E17_02145 PF08334 Type II secretion system (T2SS), protein G D9E17_02145 PF07963 Prokaryotic N-terminal methylation motif D9E17_02150 PF00482 Type II secretion system (T2SS), protein F D9E17_02160 PF00263 Bacterial type II and III secretion system protein D9E17_02160 PF03958 Bacterial type II/III secretion system short domain D9E17_02165 PF11356 Type II secretion system protein C D9E17_02170 PF13401 AAA domain D9E17_02170 PF01471 Putative peptidoglycan binding domain D9E17_02180 PF00338 Ribosomal protein S10p/S20e D9E17_02185 PF00297 Ribosomal protein L3 D9E17_02190 PF00573 Ribosomal protein L4/L1 family D9E17_02195 PF00276 Ribosomal protein L23 D9E17_02200 PF03947 Ribosomal Proteins L2, C-terminal domain D9E17_02200 PF00181 Ribosomal Proteins L2, RNA binding domain D9E17_02205 PF00203 Ribosomal protein S19 D9E17_02210 PF00237 Ribosomal protein L22p/L17e D9E17_02215 PF07650 KH domain D9E17_02215 PF00189 Ribosomal protein S3, C-terminal domain D9E17_02220 PF00252 Ribosomal protein L16p/L10e D9E17_02225 PF00831 Ribosomal L29 protein D9E17_02230 PF00366 Ribosomal protein S17 D9E17_02235 PF00238 Ribosomal protein L14p/L23e D9E17_02240 PF00467 KOW motif D9E17_02240 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D9E17_02245 PF00673 ribosomal L5P family C-terminus D9E17_02245 PF00281 Ribosomal protein L5 D9E17_02250 PF00253 Ribosomal protein S14p/S29e D9E17_02255 PF00410 Ribosomal protein S8 D9E17_02260 PF00347 Ribosomal protein L6 D9E17_02265 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D9E17_02270 PF00333 Ribosomal protein S5, N-terminal domain D9E17_02270 PF03719 Ribosomal protein S5, C-terminal domain D9E17_02275 PF00327 Ribosomal protein L30p/L7e D9E17_02280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D9E17_02285 PF00344 SecY translocase D9E17_02290 PF00444 Ribosomal protein L36 D9E17_02295 PF00416 Ribosomal protein S13/S18 D9E17_02300 PF00411 Ribosomal protein S11 D9E17_02305 PF00163 Ribosomal protein S4/S9 N-terminal domain D9E17_02305 PF01479 S4 domain D9E17_02310 PF01000 RNA polymerase Rpb3/RpoA insert domain D9E17_02310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D9E17_02310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D9E17_02315 PF01196 Ribosomal protein L17 D9E17_02320 PF09350 Domain of unknown function (DUF1992) D9E17_02325 PF13411 MerR HTH family regulatory protein D9E17_02330 PF03889 Alternative ribosome-rescue factor A D9E17_02335 PF01741 Large-conductance mechanosensitive channel, MscL D9E17_02340 PF02080 TrkA-C domain D9E17_02340 PF02254 TrkA-N domain D9E17_02345 PF01189 16S rRNA methyltransferase RsmB/F D9E17_02345 PF01029 NusB family D9E17_02350 PF02911 Formyl transferase, C-terminal domain D9E17_02350 PF00551 Formyl transferase D9E17_02355 PF01327 Polypeptide deformylase D9E17_02360 PF17782 DprA winged helix domain D9E17_02360 PF02481 DNA recombination-mediator protein A D9E17_02365 PF04361 Protein of unknown function (DUF494) D9E17_02370 PF01396 Topoisomerase DNA binding C4 zinc finger D9E17_02375 PF01300 Telomere recombination D9E17_02380 PF08501 Shikimate dehydrogenase substrate binding domain D9E17_02380 PF01488 Shikimate / quinate 5-dehydrogenase D9E17_02380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D9E17_02385 PF07369 Protein of unknown function (DUF1488) D9E17_02390 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_02435 PF00005 ABC transporter D9E17_02440 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_02445 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_02450 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_02460 PF00873 AcrB/AcrD/AcrF family D9E17_02465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_02465 PF00529 HlyD membrane-fusion protein of T1SS D9E17_02470 PF00440 Bacterial regulatory proteins, tetR family D9E17_02470 PF08361 MAATS-type transcriptional repressor, C-terminal region D9E17_02475 PF10831 Protein of unknown function (DUF2556) D9E17_02480 PF01555 DNA methylase D9E17_02485 PF02954 Bacterial regulatory protein, Fis family D9E17_02490 PF01207 Dihydrouridine synthase (Dus) D9E17_02500 PF00474 Sodium:solute symporter family D9E17_02505 PF06196 Protein of unknown function (DUF997) D9E17_02510 PF02785 Biotin carboxylase C-terminal domain D9E17_02510 PF00289 Biotin carboxylase, N-terminal domain D9E17_02510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9E17_02515 PF00364 Biotin-requiring enzyme D9E17_02520 PF00107 Zinc-binding dehydrogenase D9E17_02520 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_02525 PF00563 EAL domain D9E17_02525 PF00990 Diguanylate cyclase, GGDEF domain D9E17_02525 PF17157 Gammaproteobacterial periplasmic sensor domain D9E17_02535 PF04085 rod shape-determining protein MreC D9E17_02540 PF04093 rod shape-determining protein MreD D9E17_02545 PF02545 Maf-like protein D9E17_02550 PF10150 Ribonuclease E/G family D9E17_02550 PF00575 S1 RNA binding domain D9E17_02555 PF13116 Protein of unknown function D9E17_02555 PF13502 AsmA-like C-terminal region D9E17_02560 PF01523 Putative modulator of DNA gyrase D9E17_02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_02565 PF03466 LysR substrate binding domain D9E17_02570 PF07869 Protein of unknown function (DUF1656) D9E17_02575 PF13533 Biotin-lipoyl like D9E17_02580 PF04632 Fusaric acid resistance protein family D9E17_02585 PF01337 Barstar (barnase inhibitor) D9E17_02590 PF07338 Protein of unknown function (DUF1471) D9E17_02595 PF02863 Arginine repressor, C-terminal domain D9E17_02595 PF01316 Arginine repressor, DNA binding domain D9E17_02600 PF00056 lactate/malate dehydrogenase, NAD binding domain D9E17_02600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D9E17_02605 PF13180 PDZ domain D9E17_02610 PF00595 PDZ domain D9E17_02610 PF13180 PDZ domain D9E17_02615 PF06295 Protein of unknown function (DUF1043) D9E17_02620 PF03969 AFG1-like ATPase D9E17_02625 PF00572 Ribosomal protein L13 D9E17_02630 PF00380 Ribosomal protein S9/S16 D9E17_02640 PF02798 Glutathione S-transferase, N-terminal domain D9E17_02640 PF00043 Glutathione S-transferase, C-terminal domain D9E17_02645 PF04386 Stringent starvation protein B D9E17_02650 PF03606 C4-dicarboxylate anaerobic carrier D9E17_02655 PF00392 Bacterial regulatory proteins, gntR family D9E17_02655 PF07729 FCD domain D9E17_02660 PF00701 Dihydrodipicolinate synthetase family D9E17_02665 PF07690 Major Facilitator Superfamily D9E17_02670 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D9E17_02675 PF00480 ROK family D9E17_02680 PF04074 YhcH/YjgK/YiaL D9E17_02690 PF06250 YhcG PDDEXK nuclease domain D9E17_02690 PF17761 DUF1016 N-terminal domain D9E17_02695 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_02695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D9E17_02700 PF01645 Conserved region in glutamate synthase D9E17_02700 PF01493 GXGXG motif D9E17_02700 PF04898 Glutamate synthase central domain D9E17_02700 PF00310 Glutamine amidotransferases class-II D9E17_02705 PF16199 Radical_SAM C-terminal domain D9E17_02705 PF04055 Radical SAM superfamily D9E17_02710 PF00989 PAS fold D9E17_02710 PF01627 Hpt domain D9E17_02710 PF00512 His Kinase A (phospho-acceptor) domain D9E17_02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_02710 PF00072 Response regulator receiver domain D9E17_02710 PF18415 Histidine kinase receptor ArcB trans-membrane domain D9E17_02720 PF00912 Transglycosylase D9E17_02725 PF10707 PhoP regulatory network protein YrbL D9E17_02730 PF00381 PTS HPr component phosphorylation site D9E17_02735 PF03668 P-loop ATPase protein family D9E17_02740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_02745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D9E17_02750 PF04552 Sigma-54, DNA binding domain D9E17_02750 PF04963 Sigma-54 factor, core binding domain D9E17_02750 PF00309 Sigma-54 factor, Activator interacting domain (AID) D9E17_02755 PF12399 Branched-chain amino acid ATP-binding cassette transporter D9E17_02755 PF00005 ABC transporter D9E17_02760 PF03968 OstA-like protein D9E17_02765 PF06835 Lipopolysaccharide-assembly, LptC-related D9E17_02775 PF01380 SIS domain D9E17_02775 PF00571 CBS domain D9E17_02780 PF01699 Sodium/calcium exchanger protein D9E17_02785 PF00005 ABC transporter D9E17_02790 PF02405 Permease MlaE D9E17_02795 PF02470 MlaD protein D9E17_02800 PF05494 MlaC protein D9E17_02805 PF13466 STAS domain D9E17_02810 PF01722 BolA-like protein D9E17_02815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9E17_02820 PF13693 Winged helix-turn-helix DNA-binding D9E17_02825 PF00348 Polyprenyl synthetase D9E17_02830 PF00829 Ribosomal prokaryotic L21 protein D9E17_02835 PF01016 Ribosomal L27 protein D9E17_02840 PF00892 EamA-like transporter family D9E17_02845 PF01018 GTP1/OBG D9E17_02845 PF01926 50S ribosome-binding GTPase D9E17_02850 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D9E17_02855 PF01272 Transcription elongation factor, GreA/GreB, C-term D9E17_02855 PF03449 Transcription elongation factor, N-terminal D9E17_02860 PF01985 CRS1 / YhbY (CRM) domain D9E17_02865 PF01728 FtsJ-like methyltransferase D9E17_02870 PF17862 AAA+ lid domain D9E17_02870 PF01434 Peptidase family M41 D9E17_02870 PF06480 FtsH Extracellular D9E17_02870 PF00004 ATPase family associated with various cellular activities (AAA) D9E17_02875 PF00809 Pterin binding enzyme D9E17_02880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9E17_02880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9E17_02880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9E17_02880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9E17_02885 PF03840 Preprotein translocase SecG subunit D9E17_02895 PF00884 Sulfatase D9E17_02900 PF00764 Arginosuccinate synthase D9E17_02910 PF17384 RimP C-terminal SH3 domain D9E17_02910 PF02576 RimP N-terminal domain D9E17_02915 PF00575 S1 RNA binding domain D9E17_02915 PF08529 NusA N-terminal domain D9E17_02915 PF13184 NusA-like KH domain D9E17_02920 PF00009 Elongation factor Tu GTP binding domain D9E17_02920 PF11987 Translation-initiation factor 2 D9E17_02920 PF08364 Bacterial translation initiation factor IF-2 associated region D9E17_02920 PF04760 Translation initiation factor IF-2, N-terminal region D9E17_02925 PF02033 Ribosome-binding factor A D9E17_02930 PF09157 Pseudouridine synthase II TruB, C-terminal D9E17_02930 PF01509 TruB family pseudouridylate synthase (N terminal domain) D9E17_02930 PF16198 tRNA pseudouridylate synthase B C-terminal domain D9E17_02935 PF00312 Ribosomal protein S15 D9E17_02940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D9E17_02940 PF00575 S1 RNA binding domain D9E17_02940 PF03725 3' exoribonuclease family, domain 2 D9E17_02940 PF01138 3' exoribonuclease family, domain 1 D9E17_02940 PF00013 KH domain D9E17_02945 PF13181 Tetratricopeptide repeat D9E17_02945 PF07719 Tetratricopeptide repeat D9E17_02955 PF03880 DbpA RNA binding domain D9E17_02955 PF00270 DEAD/DEAH box helicase D9E17_02955 PF00271 Helicase conserved C-terminal domain D9E17_02955 PF12343 Cold shock protein DEAD box A D9E17_02960 PF03222 Tryptophan/tyrosine permease family D9E17_02965 PF00296 Luciferase-like monooxygenase D9E17_02985 PF13508 Acetyltransferase (GNAT) domain D9E17_02990 PF01541 GIY-YIG catalytic domain D9E17_03000 PF01965 DJ-1/PfpI family D9E17_03005 PF13460 NAD(P)H-binding D9E17_03010 PF03773 Predicted permease D9E17_03015 PF04972 BON domain D9E17_03020 PF13580 SIS domain D9E17_03025 PF02021 Uncharacterised protein family UPF0102 D9E17_03030 PF04348 LppC putative lipoprotein D9E17_03035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D9E17_03040 PF00419 Fimbrial protein D9E17_03045 PF13953 PapC C-terminal domain D9E17_03045 PF13954 PapC N-terminal domain D9E17_03045 PF00577 Outer membrane usher protein D9E17_03050 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_03050 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_03055 PF00419 Fimbrial protein D9E17_03060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D9E17_03065 PF03613 PTS system mannose/fructose/sorbose family IID component D9E17_03070 PF03609 PTS system sorbose-specific iic component D9E17_03075 PF03830 PTS system sorbose subfamily IIB component D9E17_03080 PF01116 Fructose-bisphosphate aldolase class-II D9E17_03085 PF01380 SIS domain D9E17_03090 PF01979 Amidohydrolase family D9E17_03095 PF03610 PTS system fructose IIA component D9E17_03100 PF03613 PTS system mannose/fructose/sorbose family IID component D9E17_03105 PF03609 PTS system sorbose-specific iic component D9E17_03110 PF03830 PTS system sorbose subfamily IIB component D9E17_03115 PF08013 Tagatose 6 phosphate kinase D9E17_03120 PF00455 DeoR C terminal sensor domain D9E17_03120 PF08220 DeoR-like helix-turn-helix domain D9E17_03125 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system D9E17_03130 PF15937 prlF antitoxin for toxin YhaV_toxin D9E17_03135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D9E17_03135 PF08666 SAF domain D9E17_03140 PF07690 Major Facilitator Superfamily D9E17_03145 PF03328 HpcH/HpaI aldolase/citrate lyase family D9E17_03150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9E17_03150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9E17_03155 PF02595 Glycerate kinase family D9E17_03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_03180 PF03466 LysR substrate binding domain D9E17_03185 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_03190 PF03222 Tryptophan/tyrosine permease family D9E17_03195 PF00871 Acetokinase family D9E17_03200 PF02901 Pyruvate formate lyase-like D9E17_03200 PF01228 Glycine radical D9E17_03205 PF01042 Endoribonuclease L-PSP D9E17_03210 PF03315 Serine dehydratase beta chain D9E17_03210 PF03313 Serine dehydratase alpha chain D9E17_03220 PF03313 Serine dehydratase alpha chain D9E17_03230 PF02678 Pirin D9E17_03230 PF17954 Quercetinase C-terminal cupin domain D9E17_03235 PF03466 LysR substrate binding domain D9E17_03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_03240 PF05656 Protein of unknown function (DUF805) D9E17_03245 PF05656 Protein of unknown function (DUF805) D9E17_03250 PF13409 Glutathione S-transferase, N-terminal domain D9E17_03255 PF07681 DoxX D9E17_03260 PF13997 YqjK-like protein D9E17_03265 PF07332 Putative Actinobacterial Holin-X, holin superfamily III D9E17_03270 PF05957 Bacterial protein of unknown function (DUF883) D9E17_03275 PF06476 Protein of unknown function (DUF1090) D9E17_03280 PF13721 SecD export protein N-terminal TM region D9E17_03285 PF09335 SNARE associated Golgi protein D9E17_03290 PF00392 Bacterial regulatory proteins, gntR family D9E17_03290 PF07729 FCD domain D9E17_03300 PF04449 CS1 type fimbrial major subunit D9E17_03305 PF17271 TcfC Usher-like barrel domain D9E17_03305 PF16967 E-set like domain D9E17_03305 PF15976 CS1-pili formation C-terminal D9E17_03315 PF07690 Major Facilitator Superfamily D9E17_03320 PF02614 Glucuronate isomerase D9E17_03325 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D9E17_03325 PF08666 SAF domain D9E17_03330 PF10688 Bacterial inner membrane protein D9E17_03335 PF00375 Sodium:dicarboxylate symporter family D9E17_03340 PF03741 Integral membrane protein TerC family D9E17_03345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9E17_03350 PF02698 DUF218 domain D9E17_03355 PF01863 Protein of unknown function DUF45 D9E17_03360 PF05175 Methyltransferase small domain D9E17_03365 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system D9E17_03370 PF01381 Helix-turn-helix D9E17_03375 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_03375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D9E17_03380 PF01204 Trehalase D9E17_03390 PF13520 Amino acid permease D9E17_03395 PF04074 YhcH/YjgK/YiaL D9E17_03400 PF02837 Glycosyl hydrolases family 2, sugar binding domain D9E17_03400 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D9E17_03400 PF02929 Beta galactosidase small chain D9E17_03400 PF16353 Domain of unknown function(DUF4981) D9E17_03400 PF00703 Glycosyl hydrolases family 2 D9E17_03405 PF00356 Bacterial regulatory proteins, lacI family D9E17_03410 PF01588 Putative tRNA binding domain D9E17_03415 PF00202 Aminotransferase class-III D9E17_03420 PF08447 PAS fold D9E17_03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9E17_03425 PF03551 Transcriptional regulator PadR-like family D9E17_03430 PF04954 Siderophore-interacting protein D9E17_03430 PF08021 Siderophore-interacting FAD-binding domain D9E17_03440 PF03167 Uracil DNA glycosylase superfamily D9E17_03445 PF03979 Sigma-70 factor, region 1.1 D9E17_03445 PF00140 Sigma-70 factor, region 1.2 D9E17_03445 PF04546 Sigma-70, non-essential region D9E17_03445 PF04545 Sigma-70, region 4 D9E17_03445 PF04542 Sigma-70 region 2 D9E17_03445 PF04539 Sigma-70 region 3 D9E17_03450 PF08278 DNA primase DnaG DnaB-binding D9E17_03450 PF08275 DNA primase catalytic core, N-terminal domain D9E17_03450 PF01807 CHC2 zinc finger D9E17_03450 PF10410 DnaB-helicase binding domain of primase D9E17_03455 PF01165 Ribosomal protein S21 D9E17_03460 PF00814 Glycoprotease family D9E17_03465 PF00939 Sodium:sulfate symporter transmembrane region D9E17_03470 PF05683 Fumarase C-terminus D9E17_03475 PF05681 Fumarate hydratase (Fumerase) D9E17_03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_03480 PF03466 LysR substrate binding domain D9E17_03485 PF02660 Glycerol-3-phosphate acyltransferase D9E17_03490 PF02152 Dihydroneopterin aldolase D9E17_03495 PF02673 Bacitracin resistance protein BacA D9E17_03500 PF01966 HD domain D9E17_03500 PF01743 Poly A polymerase head domain D9E17_03500 PF12627 Probable RNA and SrmB- binding site of polymerase A D9E17_03505 PF08239 Bacterial SH3 domain D9E17_03510 PF01928 CYTH domain D9E17_03515 PF08335 GlnD PII-uridylyltransferase D9E17_03515 PF03710 Glutamate-ammonia ligase adenylyltransferase D9E17_03520 PF00294 pfkB family carbohydrate kinase D9E17_03520 PF01467 Cytidylyltransferase-like D9E17_03535 PF15975 Flotillin D9E17_03535 PF01145 SPFH domain / Band 7 family D9E17_03540 PF07290 Protein of unknown function (DUF1449) D9E17_03545 PF08971 Glycogen synthesis protein D9E17_03555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_03555 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_03560 PF13954 PapC N-terminal domain D9E17_03560 PF13953 PapC C-terminal domain D9E17_03560 PF00577 Outer membrane usher protein D9E17_03565 PF00419 Fimbrial protein D9E17_03570 PF04380 Membrane fusogenic activity D9E17_03575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D9E17_03580 PF02535 ZIP Zinc transporter D9E17_03585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D9E17_03590 PF03738 Glutathionylspermidine synthase preATP-grasp D9E17_03595 PF06693 Protein of unknown function (DUF1190) D9E17_03600 PF02321 Outer membrane efflux protein D9E17_03605 PF00293 NUDIX domain D9E17_03610 PF06853 Protein of unknown function (DUF1249) D9E17_03615 PF00149 Calcineurin-like phosphoesterase D9E17_03620 PF05728 Uncharacterised protein family (UPF0227) D9E17_03625 PF00986 DNA gyrase B subunit, carboxyl terminus D9E17_03625 PF00204 DNA gyrase B D9E17_03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_03625 PF01751 Toprim domain D9E17_03630 PF03992 Antibiotic biosynthesis monooxygenase D9E17_03635 PF02525 Flavodoxin-like fold D9E17_03640 PF10840 Protein of unknown function (DUF2645) D9E17_03645 PF08521 Two-component sensor kinase N-terminal D9E17_03645 PF00512 His Kinase A (phospho-acceptor) domain D9E17_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_03650 PF00072 Response regulator receiver domain D9E17_03650 PF00486 Transcriptional regulatory protein, C terminal D9E17_03655 PF04076 Bacterial OB fold (BOF) protein D9E17_03660 PF06445 GyrI-like small molecule binding domain D9E17_03665 PF15723 Motility quorum-sensing regulator, toxin of MqsA D9E17_03670 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D9E17_03675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_03680 PF00521 DNA gyrase/topoisomerase IV, subunit A D9E17_03680 PF03989 DNA gyrase C-terminal domain, beta-propeller D9E17_03685 PF01553 Acyltransferase D9E17_03690 PF07732 Multicopper oxidase D9E17_03690 PF07731 Multicopper oxidase D9E17_03690 PF00394 Multicopper oxidase D9E17_03695 PF11842 Domain of unknown function (DUF3362) D9E17_03695 PF04055 Radical SAM superfamily D9E17_03695 PF08497 Radical SAM N-terminal D9E17_03700 PF04728 Lipoprotein leucine-zipper D9E17_03705 PF12883 Protein of unknown function (DUF3828) D9E17_03710 PF00248 Aldo/keto reductase family D9E17_03715 PF00465 Iron-containing alcohol dehydrogenase D9E17_03720 PF12833 Helix-turn-helix domain D9E17_03720 PF06719 AraC-type transcriptional regulator N-terminus D9E17_03725 PF09335 SNARE associated Golgi protein D9E17_03730 PF01053 Cys/Met metabolism PLP-dependent enzyme D9E17_03735 PF01618 MotA/TolQ/ExbB proton channel family D9E17_03740 PF02472 Biopolymer transport protein ExbD/TolR D9E17_03750 PF03350 Uncharacterized protein family, UPF0114 D9E17_03755 PF00248 Aldo/keto reductase family D9E17_03765 PF11115 Protein of unknown function (DUF2623) D9E17_03770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D9E17_03770 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D9E17_03775 PF13247 4Fe-4S dicluster domain D9E17_03780 PF03916 Polysulphide reductase, NrfD D9E17_03785 PF00374 Nickel-dependent hydrogenase D9E17_03790 PF01750 Hydrogenase maturation protease D9E17_03795 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D9E17_03800 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D9E17_03805 PF01455 HupF/HypC family D9E17_03810 PF02798 Glutathione S-transferase, N-terminal domain D9E17_03815 PF05257 CHAP domain D9E17_03815 PF03738 Glutathionylspermidine synthase preATP-grasp D9E17_03820 PF01384 Phosphate transporter family D9E17_03840 PF01943 Polysaccharide biosynthesis protein D9E17_03850 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D9E17_03855 PF03739 Lipopolysaccharide export system permease LptF/LptG D9E17_03865 PF00155 Aminotransferase class I and II D9E17_03870 PF00550 Phosphopantetheine attachment site D9E17_03880 PF14535 AMP-binding enzyme C-terminal domain D9E17_03880 PF00501 AMP-binding enzyme D9E17_03890 PF07729 FCD domain D9E17_03890 PF00392 Bacterial regulatory proteins, gntR family D9E17_03895 PF01565 FAD binding domain D9E17_03895 PF02913 FAD linked oxidases, C-terminal domain D9E17_03900 PF01565 FAD binding domain D9E17_03905 PF02754 Cysteine-rich domain D9E17_03905 PF13183 4Fe-4S dicluster domain D9E17_03910 PF03928 Haem-degrading D9E17_03915 PF01274 Malate synthase D9E17_03920 PF02652 L-lactate permease D9E17_03940 PF16549 Type II secretion system (T2SS) pilotin, S protein D9E17_03945 PF11356 Type II secretion system protein C D9E17_03955 PF00437 Type II/IV secretion system protein D9E17_03970 PF04474 Protein of unknown function (DUF554) D9E17_03975 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9E17_03975 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D9E17_03975 PF01276 Orn/Lys/Arg decarboxylase, major domain D9E17_03980 PF03825 Nucleoside H+ symporter D9E17_03985 PF01464 Transglycosylase SLT domain D9E17_03985 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D9E17_03990 PF04362 Bacterial Fe(2+) trafficking D9E17_03995 PF00633 Helix-hairpin-helix motif D9E17_03995 PF10576 Iron-sulfur binding domain of endonuclease III D9E17_03995 PF00730 HhH-GPD superfamily base excision DNA repair protein D9E17_03995 PF14815 NUDIX domain D9E17_04000 PF02390 Putative methyltransferase D9E17_04005 PF04320 Protein with unknown function (DUF469) D9E17_04010 PF11101 Protein of unknown function (DUF2884) D9E17_04015 PF00710 Asparaginase, N-terminal D9E17_04015 PF17763 Glutaminase/Asparaginase C-terminal domain D9E17_04020 PF06717 Protein of unknown function (DUF1202) D9E17_04025 PF06969 HemN C-terminal domain D9E17_04025 PF04055 Radical SAM superfamily D9E17_04030 PF01725 Ham1 family D9E17_04035 PF02594 Uncharacterised ACR, YggU family COG1872 D9E17_04040 PF02325 YGGT family D9E17_04045 PF01168 Alanine racemase, N-terminal domain D9E17_04050 PF00437 Type II/IV secretion system protein D9E17_04055 PF03652 Holliday junction resolvase D9E17_04060 PF02622 Uncharacterized ACR, COG1678 D9E17_04065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D9E17_04065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D9E17_04070 PF04452 RNA methyltransferase D9E17_04075 PF04231 Endonuclease I D9E17_04080 PF10263 SprT-like family D9E17_04080 PF17283 SprT-like zinc ribbon domain D9E17_04085 PF00083 Sugar (and other) transporter D9E17_04090 PF00438 S-adenosylmethionine synthetase, N-terminal domain D9E17_04090 PF02772 S-adenosylmethionine synthetase, central domain D9E17_04090 PF02773 S-adenosylmethionine synthetase, C-terminal domain D9E17_04095 PF11036 Virulence promoting factor D9E17_04100 PF17810 Arginine decarboxylase helical bundle domain D9E17_04100 PF17944 Arginine decarboxylase C-terminal helical extension D9E17_04100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D9E17_04105 PF00491 Arginase family D9E17_04110 PF01435 Peptidase family M48 D9E17_04115 PF02780 Transketolase, C-terminal domain D9E17_04115 PF02779 Transketolase, pyrimidine binding domain D9E17_04115 PF00456 Transketolase, thiamine diphosphate binding domain D9E17_04120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_04125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_04125 PF02378 Phosphotransferase system, EIIC D9E17_04130 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_04130 PF00107 Zinc-binding dehydrogenase D9E17_04135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D9E17_04140 PF05068 Mannitol repressor D9E17_04150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D9E17_04150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D9E17_04155 PF00162 Phosphoglycerate kinase D9E17_04160 PF01116 Fructose-bisphosphate aldolase class-II D9E17_04165 PF00924 Mechanosensitive ion channel D9E17_04165 PF05552 Conserved TM helix D9E17_04170 PF01810 LysE type translocator D9E17_04175 PF04402 Protein of unknown function (DUF541) D9E17_04180 PF03466 LysR substrate binding domain D9E17_04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_04185 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D9E17_04185 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D9E17_04190 PF00378 Enoyl-CoA hydratase/isomerase D9E17_04200 PF02310 B12 binding domain D9E17_04200 PF01642 Methylmalonyl-CoA mutase D9E17_04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_04205 PF03466 LysR substrate binding domain D9E17_04210 PF03466 LysR substrate binding domain D9E17_04215 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D9E17_04220 PF01842 ACT domain D9E17_04220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9E17_04220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9E17_04230 PF01812 5-formyltetrahydrofolate cyclo-ligase family D9E17_04240 PF05164 Cell division protein ZapA D9E17_04245 PF03695 Uncharacterised protein family (UPF0149) D9E17_04250 PF00557 Metallopeptidase family M24 D9E17_04250 PF05195 Aminopeptidase P, N-terminal domain D9E17_04255 PF01494 FAD binding domain D9E17_04260 PF01494 FAD binding domain D9E17_04270 PF01571 Aminomethyltransferase folate-binding domain D9E17_04270 PF08669 Glycine cleavage T-protein C-terminal barrel domain D9E17_04275 PF01597 Glycine cleavage H-protein D9E17_04280 PF02347 Glycine cleavage system P-protein D9E17_04285 PF00232 Glycosyl hydrolase family 1 D9E17_04295 PF03006 Haemolysin-III related D9E17_04300 PF01571 Aminomethyltransferase folate-binding domain D9E17_04305 PF03937 Flavinator of succinate dehydrogenase D9E17_04310 PF07254 Membrane-bound toxin component of toxin-antitoxin system D9E17_04315 PF00258 Flavodoxin D9E17_04320 PF00589 Phage integrase family D9E17_04320 PF02899 Phage integrase, N-terminal SAM-like domain D9E17_04325 PF10411 Disulfide bond isomerase protein N-terminus D9E17_04325 PF13098 Thioredoxin-like domain D9E17_04330 PF01368 DHH family D9E17_04330 PF02272 DHHA1 domain D9E17_04330 PF17768 RecJ OB domain D9E17_04340 PF01336 OB-fold nucleic acid binding domain D9E17_04340 PF00152 tRNA synthetases class II (D, K and N) D9E17_04345 PF00293 NUDIX domain D9E17_04360 PF00860 Permease family D9E17_04370 PF13247 4Fe-4S dicluster domain D9E17_04375 PF00860 Permease family D9E17_04380 PF01979 Amidohydrolase family D9E17_04385 PF00860 Permease family D9E17_04390 PF01799 [2Fe-2S] binding domain D9E17_04390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D9E17_04390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D9E17_04395 PF00941 FAD binding domain in molybdopterin dehydrogenase D9E17_04400 PF01979 Amidohydrolase family D9E17_04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_04405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D9E17_04410 PF12804 MobA-like NTP transferase domain D9E17_04420 PF13478 XdhC Rossmann domain D9E17_04420 PF02625 XdhC and CoxI family D9E17_04425 PF00696 Amino acid kinase family D9E17_04430 PF01979 Amidohydrolase family D9E17_04435 PF01546 Peptidase family M20/M25/M40 D9E17_04435 PF07687 Peptidase dimerisation domain D9E17_04440 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_04445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D9E17_04445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D9E17_04455 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_04455 PF01799 [2Fe-2S] binding domain D9E17_04460 PF00941 FAD binding domain in molybdopterin dehydrogenase D9E17_04460 PF03450 CO dehydrogenase flavoprotein C-terminal domain D9E17_04465 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D9E17_04465 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D9E17_04470 PF01551 Peptidase family M23 D9E17_04470 PF01476 LysM domain D9E17_04485 PF01609 Transposase DDE domain D9E17_04490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9E17_04495 PF00813 FliP family D9E17_04500 PF01313 Bacterial export proteins, family 3 D9E17_04505 PF01311 Bacterial export proteins, family 1 D9E17_04510 PF01312 FlhB HrpN YscU SpaS Family D9E17_04515 PF01312 FlhB HrpN YscU SpaS Family D9E17_04530 PF09480 Type III secretion system protein PrgH-EprH (PrgH) D9E17_04545 PF01514 Secretory protein of YscJ/FliF family D9E17_04570 PF00072 Response regulator receiver domain D9E17_04570 PF00196 Bacterial regulatory proteins, luxR family D9E17_04585 PF00486 Transcriptional regulatory protein, C terminal D9E17_04590 PF07720 Tetratricopeptide repeat D9E17_04620 PF00486 Transcriptional regulatory protein, C terminal D9E17_04625 PF00196 Bacterial regulatory proteins, luxR family D9E17_04630 PF03222 Tryptophan/tyrosine permease family D9E17_04635 PF00108 Thiolase, N-terminal domain D9E17_04635 PF02803 Thiolase, C-terminal domain D9E17_04640 PF04962 KduI/IolB family D9E17_04650 PF00083 Sugar (and other) transporter D9E17_04655 PF01177 Asp/Glu/Hydantoin racemase D9E17_04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_04660 PF03466 LysR substrate binding domain D9E17_04665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D9E17_04665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D9E17_04670 PF00356 Bacterial regulatory proteins, lacI family D9E17_04680 PF01553 Acyltransferase D9E17_04680 PF00501 AMP-binding enzyme D9E17_04685 PF07690 Major Facilitator Superfamily D9E17_04690 PF00248 Aldo/keto reductase family D9E17_04695 PF06004 Bacterial protein of unknown function (DUF903) D9E17_04700 PF03741 Integral membrane protein TerC family D9E17_04705 PF02976 DNA mismatch repair enzyme MutH D9E17_04715 PF00293 NUDIX domain D9E17_04720 PF02896 PEP-utilising enzyme, TIM barrel domain D9E17_04720 PF00391 PEP-utilising enzyme, mobile domain D9E17_04720 PF05524 PEP-utilising enzyme, N-terminal D9E17_04720 PF01590 GAF domain D9E17_04725 PF01790 Prolipoprotein diacylglyceryl transferase D9E17_04730 PF00303 Thymidylate synthase D9E17_04735 PF07963 Prokaryotic N-terminal methylation motif D9E17_04740 PF07963 Prokaryotic N-terminal methylation motif D9E17_04745 PF10713 Protein of unknown function (DUF2509) D9E17_04750 PF07963 Prokaryotic N-terminal methylation motif D9E17_04750 PF12528 Type II secretion prepilin peptidase dependent protein C D9E17_04755 PF17946 RecC C-terminal domain D9E17_04760 PF16187 Middle or third domain of peptidase_M16 D9E17_04760 PF05193 Peptidase M16 inactive domain D9E17_04760 PF00675 Insulinase (Peptidase family M16) D9E17_04765 PF13361 UvrD-like helicase C-terminal domain D9E17_04765 PF00580 UvrD/REP helicase N-terminal domain D9E17_04765 PF12705 PD-(D/E)XK nuclease superfamily D9E17_04770 PF13538 UvrD-like helicase C-terminal domain D9E17_04775 PF00696 Amino acid kinase family D9E17_04775 PF00583 Acetyltransferase (GNAT) family D9E17_04780 PF01520 N-acetylmuramoyl-L-alanine amidase D9E17_04780 PF11741 AMIN domain D9E17_04800 PF03562 MltA specific insert domain D9E17_04800 PF06725 3D domain D9E17_04805 PF00899 ThiF family D9E17_04810 PF02657 Fe-S metabolism associated domain D9E17_04815 PF00266 Aminotransferase class-V D9E17_04820 PF06004 Bacterial protein of unknown function (DUF903) D9E17_04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_04825 PF03466 LysR substrate binding domain D9E17_04830 PF04241 Protein of unknown function (DUF423) D9E17_04835 PF18125 RlmM ferredoxin-like domain D9E17_04835 PF01728 FtsJ-like methyltransferase D9E17_04840 PF00455 DeoR C terminal sensor domain D9E17_04840 PF08220 DeoR-like helix-turn-helix domain D9E17_04845 PF05025 RbsD / FucU transport protein family D9E17_04850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9E17_04850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9E17_04855 PF07881 L-fucose isomerase, first N-terminal domain D9E17_04855 PF02952 L-fucose isomerase, C-terminal domain D9E17_04855 PF07882 L-fucose isomerase, second N-terminal domain D9E17_04860 PF07690 Major Facilitator Superfamily D9E17_04865 PF00596 Class II Aldolase and Adducin N-terminal domain D9E17_04870 PF00465 Iron-containing alcohol dehydrogenase D9E17_04875 PF01367 5'-3' exonuclease, C-terminal SAM fold D9E17_04875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D9E17_04880 PF03315 Serine dehydratase beta chain D9E17_04880 PF03313 Serine dehydratase alpha chain D9E17_04890 PF11892 Domain of unknown function (DUF3412) D9E17_04890 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D9E17_04890 PF03641 Possible lysine decarboxylase D9E17_04895 PF14489 QueF-like protein D9E17_04895 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D9E17_04900 PF07348 Syd protein (SUKH-2) D9E17_04905 PF04287 tRNA pseudouridine synthase C D9E17_04910 PF00849 RNA pseudouridylate synthase D9E17_04915 PF00258 Flavodoxin D9E17_04920 PF07690 Major Facilitator Superfamily D9E17_04925 PF13378 Enolase C-terminal domain-like D9E17_04930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D9E17_04930 PF00072 Response regulator receiver domain D9E17_04930 PF01627 Hpt domain D9E17_04930 PF00512 His Kinase A (phospho-acceptor) domain D9E17_04930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_04930 PF00672 HAMP domain D9E17_04935 PF05958 tRNA (Uracil-5-)-methyltransferase D9E17_04935 PF01938 TRAM domain D9E17_04940 PF04607 Region found in RelA / SpoT proteins D9E17_04940 PF13291 ACT domain D9E17_04940 PF02824 TGS domain D9E17_04945 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9E17_04950 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D9E17_04955 PF03819 MazG nucleotide pyrophosphohydrolase domain D9E17_04960 PF06418 CTP synthase N-terminus D9E17_04960 PF00117 Glutamine amidotransferase class-I D9E17_04965 PF03952 Enolase, N-terminal domain D9E17_04965 PF00113 Enolase, C-terminal TIM barrel domain D9E17_04970 PF04536 TPM domain D9E17_04980 PF04055 Radical SAM superfamily D9E17_04985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9E17_04985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9E17_04990 PF07690 Major Facilitator Superfamily D9E17_05000 PF02913 FAD linked oxidases, C-terminal domain D9E17_05000 PF01565 FAD binding domain D9E17_05005 PF00083 Sugar (and other) transporter D9E17_05010 PF01012 Electron transfer flavoprotein domain D9E17_05015 PF01012 Electron transfer flavoprotein domain D9E17_05015 PF00766 Electron transfer flavoprotein FAD-binding domain D9E17_05020 PF04309 Glycerol-3-phosphate responsive antiterminator D9E17_05030 PF01266 FAD dependent oxidoreductase D9E17_05035 PF01242 6-pyruvoyl tetrahydropterin synthase D9E17_05040 PF00175 Oxidoreductase NAD-binding domain D9E17_05040 PF00258 Flavodoxin D9E17_05040 PF00667 FAD binding domain D9E17_05045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D9E17_05045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D9E17_05050 PF01507 Phosphoadenosine phosphosulfate reductase family D9E17_05075 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) D9E17_05080 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) D9E17_05085 PF09344 CT1975-like protein D9E17_05090 PF09704 CRISPR-associated protein (Cas_Cas5) D9E17_05095 PF08798 CRISPR associated protein D9E17_05100 PF01867 CRISPR associated protein Cas1 D9E17_05105 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) D9E17_05110 PF04389 Peptidase family M28 D9E17_05115 PF01507 Phosphoadenosine phosphosulfate reductase family D9E17_05120 PF00009 Elongation factor Tu GTP binding domain D9E17_05130 PF12084 Protein of unknown function (DUF3561) D9E17_05135 PF04977 Septum formation initiator D9E17_05140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D9E17_05145 PF02542 YgbB family D9E17_05150 PF01142 tRNA pseudouridine synthase D (TruD) D9E17_05155 PF01975 Survival protein SurE D9E17_05165 PF01476 LysM domain D9E17_05165 PF01551 Peptidase family M23 D9E17_05170 PF04545 Sigma-70, region 4 D9E17_05170 PF04539 Sigma-70 region 3 D9E17_05170 PF04542 Sigma-70 region 2 D9E17_05170 PF00140 Sigma-70 factor, region 1.2 D9E17_05175 PF02447 GntP family permease D9E17_05180 PF01261 Xylose isomerase-like TIM barrel D9E17_05185 PF00596 Class II Aldolase and Adducin N-terminal domain D9E17_05190 PF17042 Nucleotide-binding C-terminal domain D9E17_05190 PF07005 Sugar-binding N-terminal domain D9E17_05195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9E17_05195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9E17_05200 PF00455 DeoR C terminal sensor domain D9E17_05200 PF08220 DeoR-like helix-turn-helix domain D9E17_05205 PF00149 Calcineurin-like phosphoesterase D9E17_05210 PF05190 MutS family domain IV D9E17_05210 PF00488 MutS domain V D9E17_05210 PF05192 MutS domain III D9E17_05210 PF01624 MutS domain I D9E17_05210 PF05188 MutS domain II D9E17_05220 PF11756 Nitrous oxide-stimulated promoter D9E17_05225 PF00158 Sigma-54 interaction domain D9E17_05225 PF01590 GAF domain D9E17_05230 PF00586 AIR synthase related protein, N-terminal domain D9E17_05230 PF02769 AIR synthase related protein, C-terminal domain D9E17_05235 PF01924 Hydrogenase formation hypA family D9E17_05240 PF01455 HupF/HypC family D9E17_05245 PF02492 CobW/HypB/UreG, nucleotide-binding domain D9E17_05250 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D9E17_05260 PF11046 Transcriptional repressor of hyc and hyp operons D9E17_05265 PF13247 4Fe-4S dicluster domain D9E17_05270 PF00361 Proton-conducting membrane transporter D9E17_05275 PF00146 NADH dehydrogenase D9E17_05280 PF00374 Nickel-dependent hydrogenase D9E17_05280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D9E17_05280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D9E17_05285 PF12838 4Fe-4S dicluster domain D9E17_05290 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D9E17_05295 PF07450 Formate hydrogenlyase maturation protein HycH D9E17_05300 PF01750 Hydrogenase maturation protease D9E17_05305 PF00232 Glycosyl hydrolase family 1 D9E17_05310 PF02378 Phosphotransferase system, EIIC D9E17_05310 PF00367 phosphotransferase system, EIIB D9E17_05315 PF00356 Bacterial regulatory proteins, lacI family D9E17_05320 PF13247 4Fe-4S dicluster domain D9E17_05320 PF12800 4Fe-4S binding domain D9E17_05325 PF17788 HypF Kae1-like domain D9E17_05325 PF01300 Telomere recombination D9E17_05325 PF07503 HypF finger D9E17_05325 PF00708 Acylphosphatase D9E17_05330 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_05330 PF18113 Rubredoxin binding C-terminal domain D9E17_05335 PF00258 Flavodoxin D9E17_05335 PF00753 Metallo-beta-lactamase superfamily D9E17_05335 PF00301 Rubredoxin D9E17_05340 PF00158 Sigma-54 interaction domain D9E17_05340 PF01590 GAF domain D9E17_05345 PF01380 SIS domain D9E17_05345 PF00571 CBS domain D9E17_05350 PF00455 DeoR C terminal sensor domain D9E17_05350 PF08220 DeoR-like helix-turn-helix domain D9E17_05355 PF06923 Glucitol operon activator protein (GutM) D9E17_05360 PF00106 short chain dehydrogenase D9E17_05365 PF03829 PTS system glucitol/sorbitol-specific IIA component D9E17_05370 PF03612 Sorbitol phosphotransferase enzyme II N-terminus D9E17_05370 PF07663 Sorbitol phosphotransferase enzyme II C-terminus D9E17_05375 PF03608 PTS system enzyme II sorbitol-specific factor D9E17_05380 PF13406 Transglycosylase SLT domain D9E17_05385 PF02464 Competence-damaged protein D9E17_05390 PF00154 recA bacterial DNA recombination protein D9E17_05395 PF02631 RecX family D9E17_05400 PF02272 DHHA1 domain D9E17_05400 PF01411 tRNA synthetases class II (A) D9E17_05400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9E17_05405 PF02599 Global regulator protein family D9E17_05435 PF13419 Haloacid dehalogenase-like hydrolase D9E17_05440 PF09335 SNARE associated Golgi protein D9E17_05445 PF04262 Glutamate-cysteine ligase D9E17_05450 PF02664 S-Ribosylhomocysteinase (LuxS) D9E17_05455 PF07690 Major Facilitator Superfamily D9E17_05460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_05460 PF00529 HlyD membrane-fusion protein of T1SS D9E17_05465 PF01047 MarR family D9E17_05470 PF05437 Branched-chain amino acid transport protein (AzlD) D9E17_05475 PF03591 AzlC protein D9E17_05480 PF07690 Major Facilitator Superfamily D9E17_05485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9E17_05490 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_05495 PF00571 CBS domain D9E17_05495 PF00005 ABC transporter D9E17_05500 PF00268 Ribonucleotide reductase, small chain D9E17_05505 PF02867 Ribonucleotide reductase, barrel domain D9E17_05505 PF00317 Ribonucleotide reductase, all-alpha domain D9E17_05505 PF08343 Ribonucleotide reductase N-terminal D9E17_05510 PF07972 NrdI Flavodoxin like D9E17_05515 PF00462 Glutaredoxin D9E17_05520 PF05957 Bacterial protein of unknown function (DUF883) D9E17_05525 PF09400 Protein of unknown function (DUF2002) D9E17_05530 PF06610 L-alanine exporter D9E17_05535 PF00816 H-NS histone family D9E17_05540 PF00581 Rhodanese-like domain D9E17_05540 PF11127 Protein of unknown function (DUF2892) D9E17_05545 PF01022 Bacterial regulatory protein, arsR family D9E17_05550 PF01679 Proteolipid membrane potential modulator D9E17_05555 PF04972 BON domain D9E17_05555 PF01476 LysM domain D9E17_05560 PF07729 FCD domain D9E17_05560 PF00392 Bacterial regulatory proteins, gntR family D9E17_05565 PF00324 Amino acid permease D9E17_05570 PF00202 Aminotransferase class-III D9E17_05575 PF00171 Aldehyde dehydrogenase family D9E17_05580 PF01266 FAD dependent oxidoreductase D9E17_05585 PF08943 CsiD D9E17_05620 PF00665 Integrase core domain D9E17_05700 PF18766 SWI2/SNF2 ATPase D9E17_05700 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D9E17_05700 PF11867 Domain of unknown function (DUF3387) D9E17_05710 PF02384 N-6 DNA Methylase D9E17_05720 PF02195 ParB-like nuclease domain D9E17_05720 PF17762 HTH domain found in ParB protein D9E17_05730 PF13356 Arm DNA-binding domain D9E17_05730 PF00589 Phage integrase family D9E17_05740 PF01668 SmpB protein D9E17_05745 PF03364 Polyketide cyclase / dehydrase and lipid transport D9E17_05750 PF03658 RnfH family Ubiquitin D9E17_05755 PF04355 SmpA / OmlA family D9E17_05760 PF02463 RecF/RecN/SMC N terminal domain D9E17_05765 PF01513 ATP-NAD kinase D9E17_05770 PF01025 GrpE D9E17_05775 PF00571 CBS domain D9E17_05775 PF03471 Transporter associated domain D9E17_05775 PF01595 Cyclin M transmembrane N-terminal domain D9E17_05780 PF01578 Cytochrome C assembly protein D9E17_05785 PF02881 SRP54-type protein, helical bundle domain D9E17_05785 PF00448 SRP54-type protein, GTPase domain D9E17_05785 PF02978 Signal peptide binding domain D9E17_05790 PF00886 Ribosomal protein S16 D9E17_05795 PF01782 RimM N-terminal domain D9E17_05795 PF05239 PRC-barrel domain D9E17_05800 PF01746 tRNA (Guanine-1)-methyltransferase D9E17_05805 PF01245 Ribosomal protein L19 D9E17_05810 PF00691 OmpA family D9E17_05815 PF00990 Diguanylate cyclase, GGDEF domain D9E17_05815 PF17152 Periplasmic sensor domain D9E17_05820 PF13689 YfiR/HmsC-like D9E17_05825 PF10973 Protein of unknown function (DUF2799) D9E17_05830 PF00793 DAHP synthetase I family D9E17_05835 PF02153 Prephenate dehydrogenase D9E17_05835 PF01817 Chorismate mutase type II D9E17_05840 PF01817 Chorismate mutase type II D9E17_05840 PF00800 Prephenate dehydratase D9E17_05850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D9E17_05855 PF13525 Outer membrane lipoprotein D9E17_05860 PF00849 RNA pseudouridylate synthase D9E17_05860 PF01479 S4 domain D9E17_05870 PF02861 Clp amino terminal domain, pathogenicity island component D9E17_05870 PF07724 AAA domain (Cdc48 subfamily) D9E17_05870 PF17871 AAA lid domain D9E17_05870 PF10431 C-terminal, D2-small domain, of ClpB protein D9E17_05870 PF00004 ATPase family associated with various cellular activities (AAA) D9E17_05895 PF00083 Sugar (and other) transporter D9E17_05900 PF10043 Predicted periplasmic lipoprotein (DUF2279) D9E17_05905 PF13091 PLD-like domain D9E17_05910 PF13380 CoA binding domain D9E17_05910 PF00583 Acetyltransferase (GNAT) family D9E17_05910 PF13607 Succinyl-CoA ligase like flavodoxin domain D9E17_05920 PF00085 Thioredoxin D9E17_05925 PF08032 RNA 2'-O ribose methyltransferase substrate binding D9E17_05925 PF00588 SpoU rRNA Methylase family D9E17_05930 PF03167 Uracil DNA glycosylase superfamily D9E17_05935 PF01228 Glycine radical D9E17_05940 PF01810 LysE type translocator D9E17_05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_05945 PF03466 LysR substrate binding domain D9E17_05950 PF00270 DEAD/DEAH box helicase D9E17_05950 PF00271 Helicase conserved C-terminal domain D9E17_05955 PF05175 Methyltransferase small domain D9E17_05960 PF00890 FAD binding domain D9E17_05960 PF02910 Fumarate reductase flavoprotein C-term D9E17_05970 PF04542 Sigma-70 region 2 D9E17_05970 PF08281 Sigma-70, region 4 D9E17_05975 PF03873 Anti sigma-E protein RseA, C-terminal domain D9E17_05975 PF03872 Anti sigma-E protein RseA, N-terminal domain D9E17_05980 PF03888 MucB/RseB N-terminal domain D9E17_05980 PF17188 MucB/RseB C-terminal domain D9E17_05990 PF00009 Elongation factor Tu GTP binding domain D9E17_05990 PF00679 Elongation factor G C-terminus D9E17_05990 PF03144 Elongation factor Tu domain 2 D9E17_05990 PF06421 GTP-binding protein LepA C-terminus D9E17_05995 PF10502 Signal peptidase, peptidase S26 D9E17_06000 PF14622 Ribonuclease-III-like D9E17_06000 PF00035 Double-stranded RNA binding motif D9E17_06005 PF01926 50S ribosome-binding GTPase D9E17_06005 PF07650 KH domain D9E17_06010 PF11967 Recombination protein O N terminal D9E17_06010 PF02565 Recombination protein O C terminal D9E17_06015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D9E17_06020 PF01648 4'-phosphopantetheinyl transferase superfamily D9E17_06030 PF12838 4Fe-4S dicluster domain D9E17_06035 PF01418 Helix-turn-helix domain, rpiR family D9E17_06035 PF01380 SIS domain D9E17_06045 PF14437 MafB19-like deaminase D9E17_06050 PF01464 Transglycosylase SLT domain D9E17_06050 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_06055 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D9E17_06055 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D9E17_06055 PF02769 AIR synthase related protein, C-terminal domain D9E17_06060 PF00512 His Kinase A (phospho-acceptor) domain D9E17_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_06065 PF13942 YfhG lipoprotein D9E17_06070 PF00158 Sigma-54 interaction domain D9E17_06070 PF00072 Response regulator receiver domain D9E17_06075 PF00543 Nitrogen regulatory protein P-II D9E17_06080 PF00042 Globin D9E17_06080 PF00175 Oxidoreductase NAD-binding domain D9E17_06080 PF00970 Oxidoreductase FAD-binding domain D9E17_06085 PF00464 Serine hydroxymethyltransferase D9E17_06090 PF00480 ROK family D9E17_06100 PF13407 Periplasmic binding protein domain D9E17_06105 PF00005 ABC transporter D9E17_06110 PF02653 Branched-chain amino acid transport system / permease component D9E17_06115 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_06115 PF00107 Zinc-binding dehydrogenase D9E17_06120 PF01263 Aldose 1-epimerase D9E17_06125 PF07681 DoxX D9E17_06130 PF14759 Reductase C-terminal D9E17_06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_06135 PF00106 short chain dehydrogenase D9E17_06140 PF00355 Rieske [2Fe-2S] domain D9E17_06145 PF00866 Ring hydroxylating beta subunit D9E17_06150 PF00355 Rieske [2Fe-2S] domain D9E17_06150 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D9E17_06155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_06155 PF03466 LysR substrate binding domain D9E17_06160 PF12832 MFS_1 like family D9E17_06165 PF00874 PRD domain D9E17_06170 PF12146 Serine aminopeptidase, S33 D9E17_06175 PF00459 Inositol monophosphatase family D9E17_06180 PF00588 SpoU rRNA Methylase family D9E17_06185 PF02082 Transcriptional regulator D9E17_06190 PF00266 Aminotransferase class-V D9E17_06195 PF01592 NifU-like N terminal domain D9E17_06200 PF01521 Iron-sulphur cluster biosynthesis D9E17_06205 PF07743 HSCB C-terminal oligomerisation domain D9E17_06210 PF00012 Hsp70 protein D9E17_06215 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_06220 PF04384 Iron-sulphur cluster assembly D9E17_06225 PF00883 Cytosol aminopeptidase family, catalytic domain D9E17_06225 PF12404 Peptidase D9E17_06230 PF14581 SseB protein C-terminal domain D9E17_06230 PF07179 SseB protein N-terminal domain D9E17_06235 PF00581 Rhodanese-like domain D9E17_06240 PF07703 Alpha-2-macroglobulin bait region domain D9E17_06240 PF07678 A-macroglobulin TED domain D9E17_06240 PF01835 MG2 domain D9E17_06240 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D9E17_06240 PF00207 Alpha-2-macroglobulin family D9E17_06240 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D9E17_06240 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D9E17_06240 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D9E17_06240 PF17962 Bacterial macroglobulin domain 6 D9E17_06245 PF06832 Penicillin-Binding Protein C-terminus Family D9E17_06245 PF00912 Transglycosylase D9E17_06245 PF00905 Penicillin binding protein transpeptidase domain D9E17_06250 PF00334 Nucleoside diphosphate kinase D9E17_06255 PF04055 Radical SAM superfamily D9E17_06260 PF13464 Domain of unknown function (DUF4115) D9E17_06265 PF04551 GcpE protein D9E17_06270 PF13393 Histidyl-tRNA synthetase D9E17_06270 PF03129 Anticodon binding domain D9E17_06275 PF09976 Tetratricopeptide repeat-like domain D9E17_06280 PF13360 PQQ-like domain D9E17_06285 PF01926 50S ribosome-binding GTPase D9E17_06285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D9E17_06290 PF07191 zinc-ribbons D9E17_06295 PF13742 OB-fold nucleic acid binding domain D9E17_06295 PF02601 Exonuclease VII, large subunit D9E17_06300 PF00571 CBS domain D9E17_06300 PF00478 IMP dehydrogenase / GMP reductase domain D9E17_06305 PF02540 NAD synthase D9E17_06305 PF00958 GMP synthase C terminal domain D9E17_06305 PF00117 Glutamine amidotransferase class-I D9E17_06310 PF17358 Family of unknown function (DUF5384) D9E17_06315 PF05433 Glycine zipper 2TM domain D9E17_06320 PF11119 Protein of unknown function (DUF2633) D9E17_06325 PF05231 MASE1 D9E17_06325 PF00563 EAL domain D9E17_06330 PF02541 Ppx/GppA phosphatase family D9E17_06335 PF17941 Polyphosphate kinase C-terminal domain 1 D9E17_06335 PF13090 Polyphosphate kinase C-terminal domain 2 D9E17_06335 PF13089 Polyphosphate kinase N-terminal domain D9E17_06335 PF02503 Polyphosphate kinase middle domain D9E17_06340 PF00551 Formyl transferase D9E17_06345 PF00586 AIR synthase related protein, N-terminal domain D9E17_06345 PF02769 AIR synthase related protein, C-terminal domain D9E17_06355 PF00860 Permease family D9E17_06360 PF00308 Bacterial dnaA protein D9E17_06365 PF03960 ArsC family D9E17_06370 PF01435 Peptidase family M48 D9E17_06375 PF01594 AI-2E family transporter D9E17_06380 PF01226 Formate/nitrite transporter D9E17_06385 PF01590 GAF domain D9E17_06385 PF00158 Sigma-54 interaction domain D9E17_06390 PF07450 Formate hydrogenlyase maturation protein HycH D9E17_06395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D9E17_06400 PF12838 4Fe-4S dicluster domain D9E17_06405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D9E17_06405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D9E17_06405 PF00374 Nickel-dependent hydrogenase D9E17_06410 PF00361 Proton-conducting membrane transporter D9E17_06410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9E17_06415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D9E17_06420 PF00361 Proton-conducting membrane transporter D9E17_06420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9E17_06425 PF00361 Proton-conducting membrane transporter D9E17_06425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9E17_06430 PF00146 NADH dehydrogenase D9E17_06440 PF00037 4Fe-4S binding domain D9E17_06440 PF12798 4Fe-4S binding domain D9E17_06445 PF00578 AhpC/TSA family D9E17_06450 PF01842 ACT domain D9E17_06455 PF00701 Dihydrodipicolinate synthetase family D9E17_06460 PF06804 NlpB/DapX lipoprotein D9E17_06465 PF01259 SAICAR synthetase D9E17_06470 PF04228 Putative neutral zinc metallopeptidase D9E17_06475 PF05127 Helicase D9E17_06475 PF17176 tRNA-binding domain D9E17_06475 PF08351 Domain of unknown function (DUF1726) D9E17_06475 PF13718 GNAT acetyltransferase 2 D9E17_06480 PF02230 Phospholipase/Carboxylesterase D9E17_06485 PF13980 Uncharacterised protein family (UPF0370) D9E17_06490 PF07687 Peptidase dimerisation domain D9E17_06490 PF01546 Peptidase family M20/M25/M40 D9E17_06495 PF03960 ArsC family D9E17_06505 PF00873 AcrB/AcrD/AcrF family D9E17_06510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_06510 PF00672 HAMP domain D9E17_06510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D9E17_06510 PF07730 Histidine kinase D9E17_06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_06515 PF13247 4Fe-4S dicluster domain D9E17_06515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D9E17_06520 PF00293 NUDIX domain D9E17_06525 PF06674 Protein of unknown function (DUF1176) D9E17_06530 PF00456 Transketolase, thiamine diphosphate binding domain D9E17_06530 PF02779 Transketolase, pyrimidine binding domain D9E17_06530 PF02780 Transketolase, C-terminal domain D9E17_06535 PF00923 Transaldolase/Fructose-6-phosphate aldolase D9E17_06540 PF01515 Phosphate acetyl/butaryl transferase D9E17_06540 PF00390 Malic enzyme, N-terminal domain D9E17_06540 PF03949 Malic enzyme, NAD binding domain D9E17_06545 PF00936 BMC domain D9E17_06550 PF10662 Ethanolamine utilisation - propanediol utilisation D9E17_06555 PF06249 Ethanolamine utilisation protein EutQ D9E17_06560 PF01923 Cobalamin adenosyltransferase D9E17_06565 PF01515 Phosphate acetyl/butaryl transferase D9E17_06570 PF00936 BMC domain D9E17_06575 PF03319 Ethanolamine utilisation protein EutN/carboxysome D9E17_06580 PF00171 Aldehyde dehydrogenase family D9E17_06590 PF00465 Iron-containing alcohol dehydrogenase D9E17_06595 PF04346 Ethanolamine utilisation protein, EutH D9E17_06600 PF06277 Ethanolamine utilisation protein EutA D9E17_06605 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D9E17_06610 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D9E17_06615 PF00936 BMC domain D9E17_06620 PF00936 BMC domain D9E17_06620 PF16365 Ethanolamine utilization protein EutK C-terminus D9E17_06625 PF12833 Helix-turn-helix domain D9E17_06630 PF01218 Coproporphyrinogen III oxidase D9E17_06635 PF01520 N-acetylmuramoyl-L-alanine amidase D9E17_06640 PF00583 Acetyltransferase (GNAT) family D9E17_06645 PF11143 Protein of unknown function (DUF2919) D9E17_06650 PF06572 Protein of unknown function (DUF1131) D9E17_06655 PF04261 Dyp-type peroxidase family D9E17_06660 PF00144 Beta-lactamase D9E17_06665 PF02378 Phosphotransferase system, EIIC D9E17_06665 PF00367 phosphotransferase system, EIIB D9E17_06670 PF01380 SIS domain D9E17_06675 PF01380 SIS domain D9E17_06675 PF01418 Helix-turn-helix domain, rpiR family D9E17_06690 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_06695 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_06700 PF00005 ABC transporter D9E17_06705 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_06710 PF05406 WGR domain D9E17_06715 PF17263 Family of unknown function (DUF5329) D9E17_06720 PF08543 Phosphomethylpyrimidine kinase D9E17_06725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9E17_06730 PF02896 PEP-utilising enzyme, TIM barrel domain D9E17_06730 PF00391 PEP-utilising enzyme, mobile domain D9E17_06730 PF05524 PEP-utilising enzyme, N-terminal D9E17_06735 PF00381 PTS HPr component phosphorylation site D9E17_06740 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_06750 PF04354 ZipA, C-terminal FtsZ-binding domain D9E17_06755 PF00533 BRCA1 C Terminus (BRCT) domain D9E17_06755 PF01653 NAD-dependent DNA ligase adenylation domain D9E17_06755 PF03120 NAD-dependent DNA ligase OB-fold domain D9E17_06755 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D9E17_06755 PF12826 Helix-hairpin-helix motif D9E17_06760 PF12843 Putative quorum-sensing-regulated virulence factor D9E17_06765 PF13593 SBF-like CPA transporter family (DUF4137) D9E17_06770 PF03466 LysR substrate binding domain D9E17_06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_06780 PF01048 Phosphorylase superfamily D9E17_06785 PF03825 Nucleoside H+ symporter D9E17_06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_06795 PF03466 LysR substrate binding domain D9E17_06825 PF00749 tRNA synthetases class I (E and Q), catalytic domain D9E17_06830 PF07037 Putative transcription regulator (DUF1323) D9E17_06835 PF07037 Putative transcription regulator (DUF1323) D9E17_06850 PF00563 EAL domain D9E17_06850 PF05231 MASE1 D9E17_06855 PF07662 Na+ dependent nucleoside transporter C-terminus D9E17_06855 PF07670 Nucleoside recognition D9E17_06855 PF01773 Na+ dependent nucleoside transporter N-terminus D9E17_06860 PF01566 Natural resistance-associated macrophage protein D9E17_06865 PF10697 Protein of unknown function (DUF2502) D9E17_06870 PF00654 Voltage gated chloride channel D9E17_06875 PF02685 Glucokinase D9E17_06880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_06885 PF02378 Phosphotransferase system, EIIC D9E17_06890 PF00557 Metallopeptidase family M24 D9E17_06890 PF01321 Creatinase/Prolidase N-terminal domain D9E17_06895 PF05343 M42 glutamyl aminopeptidase D9E17_06900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_06900 PF05524 PEP-utilising enzyme, N-terminal D9E17_06900 PF00391 PEP-utilising enzyme, mobile domain D9E17_06900 PF00381 PTS HPr component phosphorylation site D9E17_06900 PF02896 PEP-utilising enzyme, TIM barrel domain D9E17_06905 PF12833 Helix-turn-helix domain D9E17_06910 PF04397 LytTr DNA-binding domain D9E17_06910 PF00072 Response regulator receiver domain D9E17_06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_06915 PF07694 5TMR of 5TMR-LYT D9E17_06915 PF06580 Histidine kinase D9E17_06920 PF00155 Aminotransferase class I and II D9E17_06930 PF03279 Bacterial lipid A biosynthesis acyltransferase D9E17_06935 PF10810 Protein of unknown function (DUF2545) D9E17_06945 PF10938 YfdX protein D9E17_06950 PF02515 CoA-transferase family III D9E17_06955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_06955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9E17_06955 PF00205 Thiamine pyrophosphate enzyme, central domain D9E17_06960 PF03547 Membrane transport protein D9E17_06965 PF02515 CoA-transferase family III D9E17_06970 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_06970 PF01627 Hpt domain D9E17_06970 PF00512 His Kinase A (phospho-acceptor) domain D9E17_06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_06970 PF00072 Response regulator receiver domain D9E17_06975 PF00196 Bacterial regulatory proteins, luxR family D9E17_06975 PF00072 Response regulator receiver domain D9E17_06980 PF00529 HlyD membrane-fusion protein of T1SS D9E17_06980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_06985 PF07690 Major Facilitator Superfamily D9E17_06990 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_06995 PF02447 GntP family permease D9E17_07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_07000 PF03466 LysR substrate binding domain D9E17_07010 PF01226 Formate/nitrite transporter D9E17_07015 PF04333 MlaA lipoprotein D9E17_07025 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D9E17_07030 PF04175 Protein of unknown function (DUF406) D9E17_07035 PF02803 Thiolase, C-terminal domain D9E17_07035 PF00108 Thiolase, N-terminal domain D9E17_07040 PF00378 Enoyl-CoA hydratase/isomerase D9E17_07040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D9E17_07040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D9E17_07045 PF00300 Histidine phosphatase superfamily (branch 1) D9E17_07050 PF00419 Fimbrial protein D9E17_07055 PF13953 PapC C-terminal domain D9E17_07055 PF00577 Outer membrane usher protein D9E17_07055 PF13954 PapC N-terminal domain D9E17_07060 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_07060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_07065 PF00419 Fimbrial protein D9E17_07070 PF00419 Fimbrial protein D9E17_07075 PF00419 Fimbrial protein D9E17_07080 PF11245 Protein of unknown function (DUF2544) D9E17_07085 PF01713 Smr domain D9E17_07090 PF05175 Methyltransferase small domain D9E17_07095 PF01264 Chorismate synthase D9E17_07100 PF03411 Penicillin-insensitive murein endopeptidase D9E17_07105 PF01925 Sulfite exporter TauE/SafE D9E17_07110 PF04315 Elongation factor P hydroxylase D9E17_07115 PF08891 YfcL protein D9E17_07120 PF01266 FAD dependent oxidoreductase D9E17_07120 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D9E17_07125 PF00109 Beta-ketoacyl synthase, N-terminal domain D9E17_07125 PF02801 Beta-ketoacyl synthase, C-terminal domain D9E17_07130 PF07690 Major Facilitator Superfamily D9E17_07140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9E17_07140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9E17_07140 PF11890 Domain of unknown function (DUF3410) D9E17_07145 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9E17_07145 PF02774 Semialdehyde dehydrogenase, dimerisation domain D9E17_07150 PF01416 tRNA pseudouridine synthase D9E17_07155 PF09335 SNARE associated Golgi protein D9E17_07160 PF01039 Carboxyl transferase domain D9E17_07160 PF17848 Acetyl-coA carboxylase zinc finger domain D9E17_07165 PF02875 Mur ligase family, glutamate ligase domain D9E17_07165 PF08245 Mur ligase middle domain D9E17_07170 PF05036 Sporulation related domain D9E17_07175 PF02674 Colicin V production protein D9E17_07180 PF00156 Phosphoribosyl transferase domain D9E17_07185 PF02441 Flavoprotein D9E17_07190 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_07195 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_07200 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_07205 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_07210 PF00005 ABC transporter D9E17_07220 PF08338 Domain of unknown function (DUF1731) D9E17_07220 PF01370 NAD dependent epimerase/dehydratase family D9E17_07225 PF02152 Dihydroneopterin aldolase D9E17_07230 PF02798 Glutathione S-transferase, N-terminal domain D9E17_07230 PF00043 Glutathione S-transferase, C-terminal domain D9E17_07235 PF14834 Glutathione S-transferase, C-terminal domain D9E17_07235 PF02798 Glutathione S-transferase, N-terminal domain D9E17_07240 PF12850 Calcineurin-like phosphoesterase superfamily domain D9E17_07245 PF00293 NUDIX domain D9E17_07250 PF03606 C4-dicarboxylate anaerobic carrier D9E17_07255 PF07085 DRTGG domain D9E17_07255 PF01515 Phosphate acetyl/butaryl transferase D9E17_07260 PF00871 Acetokinase family D9E17_07265 PF04217 Protein of unknown function, DUF412 D9E17_07270 PF03887 YfbU domain D9E17_07275 PF13419 Haloacid dehalogenase-like hydrolase D9E17_07280 PF02080 TrkA-C domain D9E17_07280 PF03600 Citrate transporter D9E17_07290 PF00155 Aminotransferase class I and II D9E17_07295 PF03466 LysR substrate binding domain D9E17_07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_07300 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D9E17_07305 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D9E17_07310 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D9E17_07310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D9E17_07320 PF10531 SLBB domain D9E17_07320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D9E17_07320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D9E17_07325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9E17_07325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D9E17_07325 PF01568 Molydopterin dinucleotide binding domain D9E17_07325 PF00384 Molybdopterin oxidoreductase D9E17_07330 PF00146 NADH dehydrogenase D9E17_07335 PF12838 4Fe-4S dicluster domain D9E17_07340 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D9E17_07345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D9E17_07350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D9E17_07350 PF00361 Proton-conducting membrane transporter D9E17_07355 PF00361 Proton-conducting membrane transporter D9E17_07360 PF00361 Proton-conducting membrane transporter D9E17_07365 PF08974 Domain of unknown function (DUF1877) D9E17_07375 PF02902 Ulp1 protease family, C-terminal catalytic domain D9E17_07380 PF12706 Beta-lactamase superfamily domain D9E17_07385 PF13673 Acetyltransferase (GNAT) domain D9E17_07390 PF05957 Bacterial protein of unknown function (DUF883) D9E17_07395 PF00425 chorismate binding enzyme D9E17_07400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_07400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9E17_07400 PF16582 Middle domain of thiamine pyrophosphate D9E17_07405 PF12697 Alpha/beta hydrolase family D9E17_07410 PF00378 Enoyl-CoA hydratase/isomerase D9E17_07415 PF13378 Enolase C-terminal domain-like D9E17_07420 PF00501 AMP-binding enzyme D9E17_07420 PF13193 AMP-binding enzyme C-terminal domain D9E17_07435 PF00892 EamA-like transporter family D9E17_07440 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D9E17_07445 PF01522 Polysaccharide deacetylase D9E17_07455 PF00535 Glycosyl transferase family 2 D9E17_07460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D9E17_07465 PF00300 Histidine phosphatase superfamily (branch 1) D9E17_07470 PF00293 NUDIX domain D9E17_07475 PF07437 YfaZ precursor D9E17_07480 PF00994 Probable molybdopterin binding domain D9E17_07485 PF09339 IclR helix-turn-helix domain D9E17_07485 PF01614 Bacterial transcriptional regulator D9E17_07490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9E17_07490 PF13378 Enolase C-terminal domain-like D9E17_07500 PF03328 HpcH/HpaI aldolase/citrate lyase family D9E17_07505 PF04754 Putative transposase, YhgA-like D9E17_07510 PF13183 4Fe-4S dicluster domain D9E17_07510 PF02754 Cysteine-rich domain D9E17_07515 PF00890 FAD binding domain D9E17_07520 PF01266 FAD dependent oxidoreductase D9E17_07520 PF04324 BFD-like [2Fe-2S] binding domain D9E17_07525 PF07690 Major Facilitator Superfamily D9E17_07530 PF03009 Glycerophosphoryl diester phosphodiesterase family D9E17_07545 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_07550 PF00268 Ribonucleotide reductase, small chain D9E17_07555 PF00317 Ribonucleotide reductase, all-alpha domain D9E17_07555 PF03477 ATP cone domain D9E17_07555 PF02867 Ribonucleotide reductase, barrel domain D9E17_07560 PF12951 Passenger-associated-transport-repeat D9E17_07560 PF03797 Autotransporter beta-domain D9E17_07560 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat D9E17_07570 PF03989 DNA gyrase C-terminal domain, beta-propeller D9E17_07570 PF00521 DNA gyrase/topoisomerase IV, subunit A D9E17_07580 PF00207 Alpha-2-macroglobulin family D9E17_07580 PF07703 Alpha-2-macroglobulin bait region domain D9E17_07580 PF01835 MG2 domain D9E17_07585 PF08486 Stage II sporulation protein D9E17_07585 PF10062 Predicted secreted protein (DUF2300) D9E17_07590 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) D9E17_07595 PF09456 RcsC Alpha-Beta-Loop (ABL) D9E17_07595 PF00512 His Kinase A (phospho-acceptor) domain D9E17_07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_07595 PF00072 Response regulator receiver domain D9E17_07600 PF00072 Response regulator receiver domain D9E17_07600 PF00196 Bacterial regulatory proteins, luxR family D9E17_07605 PF01627 Hpt domain D9E17_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_07605 PF16359 RcsD-ABL domain D9E17_07610 PF00267 Gram-negative porin D9E17_07615 PF02424 ApbE family D9E17_07620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D9E17_07620 PF02805 Metal binding domain of Ada D9E17_07620 PF12833 Helix-turn-helix domain D9E17_07620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D9E17_07625 PF13532 2OG-Fe(II) oxygenase superfamily D9E17_07630 PF00005 ABC transporter D9E17_07635 PF06039 Malate:quinone oxidoreductase (Mqo) D9E17_07640 PF03974 Ecotin D9E17_07645 PF00037 4Fe-4S binding domain D9E17_07645 PF12800 4Fe-4S binding domain D9E17_07645 PF13187 4Fe-4S dicluster domain D9E17_07650 PF03927 NapD protein D9E17_07655 PF00384 Molybdopterin oxidoreductase D9E17_07655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9E17_07655 PF01568 Molydopterin dinucleotide binding domain D9E17_07660 PF12838 4Fe-4S dicluster domain D9E17_07660 PF12800 4Fe-4S binding domain D9E17_07665 PF12801 4Fe-4S binding domain D9E17_07665 PF13237 4Fe-4S dicluster domain D9E17_07670 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D9E17_07675 PF03264 NapC/NirT cytochrome c family, N-terminal region D9E17_07680 PF00005 ABC transporter D9E17_07685 PF03379 CcmB protein D9E17_07690 PF01578 Cytochrome C assembly protein D9E17_07695 PF04995 Heme exporter protein D (CcmD) D9E17_07700 PF03100 CcmE D9E17_07705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D9E17_07705 PF01578 Cytochrome C assembly protein D9E17_07710 PF08534 Redoxin D9E17_07715 PF03918 Cytochrome C biogenesis protein D9E17_07720 PF00072 Response regulator receiver domain D9E17_07720 PF00196 Bacterial regulatory proteins, luxR family D9E17_07735 PF00884 Sulfatase D9E17_07735 PF11893 Domain of unknown function (DUF3413) D9E17_07740 PF07208 Protein of unknown function (DUF1414) D9E17_07745 PF04245 37-kD nucleoid-associated bacterial protein D9E17_07750 PF01386 Ribosomal L25p family D9E17_07755 PF04851 Type III restriction enzyme, res subunit D9E17_07755 PF00271 Helicase conserved C-terminal domain D9E17_07760 PF00849 RNA pseudouridylate synthase D9E17_07760 PF01479 S4 domain D9E17_07765 PF07690 Major Facilitator Superfamily D9E17_07770 PF13989 YejG-like protein D9E17_07775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_07775 PF00005 ABC transporter D9E17_07780 PF12911 N-terminal TM domain of oligopeptide transport permease C D9E17_07780 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_07785 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_07790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_07795 PF00563 EAL domain D9E17_07795 PF12792 CSS motif domain associated with EAL D9E17_07800 PF00877 NlpC/P60 family D9E17_07805 PF01569 PAP2 superfamily D9E17_07810 PF02492 CobW/HypB/UreG, nucleotide-binding domain D9E17_07810 PF07683 Cobalamin synthesis protein cobW C-terminal domain D9E17_07815 PF08125 Mannitol dehydrogenase C-terminal domain D9E17_07815 PF01232 Mannitol dehydrogenase Rossmann domain D9E17_07820 PF01132 Elongation factor P (EF-P) OB domain D9E17_07820 PF08207 Elongation factor P (EF-P) KOW-like domain D9E17_07820 PF09285 Elongation factor P, C-terminal D9E17_07825 PF03692 Putative zinc- or iron-chelating domain D9E17_07830 PF07690 Major Facilitator Superfamily D9E17_07835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_07835 PF00381 PTS HPr component phosphorylation site D9E17_07840 PF00294 pfkB family carbohydrate kinase D9E17_07845 PF02378 Phosphotransferase system, EIIC D9E17_07845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_07850 PF00294 pfkB family carbohydrate kinase D9E17_07855 PF04227 Indigoidine synthase A like protein D9E17_07860 PF07662 Na+ dependent nucleoside transporter C-terminus D9E17_07860 PF01773 Na+ dependent nucleoside transporter N-terminus D9E17_07865 PF00027 Cyclic nucleotide-binding domain D9E17_07870 PF01156 Inosine-uridine preferring nucleoside hydrolase D9E17_07875 PF07662 Na+ dependent nucleoside transporter C-terminus D9E17_07875 PF01773 Na+ dependent nucleoside transporter N-terminus D9E17_07880 PF00294 pfkB family carbohydrate kinase D9E17_07885 PF01261 Xylose isomerase-like TIM barrel D9E17_07890 PF03601 Conserved hypothetical protein 698 D9E17_07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_07895 PF03466 LysR substrate binding domain D9E17_07900 PF00324 Amino acid permease D9E17_07905 PF07715 TonB-dependent Receptor Plug Domain D9E17_07905 PF00593 TonB dependent receptor D9E17_07910 PF00756 Putative esterase D9E17_07915 PF01227 GTP cyclohydrolase I D9E17_07920 PF04235 Protein of unknown function (DUF418) D9E17_07925 PF00356 Bacterial regulatory proteins, lacI family D9E17_07930 PF13407 Periplasmic binding protein domain D9E17_07935 PF00005 ABC transporter D9E17_07940 PF02653 Branched-chain amino acid transport system / permease component D9E17_07945 PF01180 Dihydroorotate dehydrogenase D9E17_07950 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_07950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D9E17_07955 PF10808 Protein of unknown function (DUF2542) D9E17_07960 PF02698 DUF218 domain D9E17_07965 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D9E17_07965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9E17_07970 PF04172 LrgB-like family D9E17_07975 PF03788 LrgA family D9E17_07980 PF01207 Dihydrouridine synthase (Dus) D9E17_07990 PF02321 Outer membrane efflux protein D9E17_08000 PF09335 SNARE associated Golgi protein D9E17_08005 PF04893 Yip1 domain D9E17_08010 PF00768 D-alanyl-D-alanine carboxypeptidase D9E17_08015 PF01565 FAD binding domain D9E17_08015 PF09330 D-lactate dehydrogenase, membrane binding D9E17_08020 PF00933 Glycosyl hydrolase family 3 N terminal domain D9E17_08020 PF01915 Glycosyl hydrolase family 3 C-terminal domain D9E17_08020 PF14310 Fibronectin type III-like domain D9E17_08025 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9E17_08030 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_08035 PF00005 ABC transporter D9E17_08040 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_08050 PF13411 MerR HTH family regulatory protein D9E17_08055 PF07694 5TMR of 5TMR-LYT D9E17_08055 PF06580 Histidine kinase D9E17_08060 PF04397 LytTr DNA-binding domain D9E17_08060 PF00072 Response regulator receiver domain D9E17_08065 PF07308 Protein of unknown function (DUF1456) D9E17_08070 PF06998 Protein of unknown function (DUF1307) D9E17_08075 PF04434 SWIM zinc finger D9E17_08080 PF05762 VWA domain containing CoxE-like protein D9E17_08090 PF07728 AAA domain (dynein-related subfamily) D9E17_08100 PF13569 Domain of unknown function (DUF4132) D9E17_08105 PF13569 Domain of unknown function (DUF4132) D9E17_08110 PF01588 Putative tRNA binding domain D9E17_08110 PF09334 tRNA synthetases class I (M) D9E17_08115 PF10609 NUBPL iron-transfer P-loop NTPase D9E17_08120 PF10836 Protein of unknown function (DUF2574) D9E17_08125 PF00419 Fimbrial protein D9E17_08140 PF13953 PapC C-terminal domain D9E17_08140 PF00577 Outer membrane usher protein D9E17_08140 PF13954 PapC N-terminal domain D9E17_08145 PF00419 Fimbrial protein D9E17_08150 PF11776 Nickel/cobalt transporter regulator D9E17_08155 PF03824 High-affinity nickel-transport protein D9E17_08160 PF02583 Metal-sensitive transcriptional repressor D9E17_08165 PF02110 Hydroxyethylthiazole kinase family D9E17_08170 PF08543 Phosphomethylpyrimidine kinase D9E17_08175 PF01183 Glycosyl hydrolases family 25 D9E17_08180 PF00392 Bacterial regulatory proteins, gntR family D9E17_08180 PF07702 UTRA domain D9E17_08185 PF00294 pfkB family carbohydrate kinase D9E17_08190 PF03747 ADP-ribosylglycohydrolase D9E17_08195 PF03825 Nucleoside H+ symporter D9E17_08200 PF01791 DeoC/LacD family aldolase D9E17_08210 PF01116 Fructose-bisphosphate aldolase class-II D9E17_08230 PF03611 PTS system sugar-specific permease component D9E17_08235 PF00107 Zinc-binding dehydrogenase D9E17_08235 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_08240 PF08220 DeoR-like helix-turn-helix domain D9E17_08245 PF00781 Diacylglycerol kinase catalytic domain D9E17_08270 PF07411 Domain of unknown function (DUF1508) D9E17_08275 PF00486 Transcriptional regulatory protein, C terminal D9E17_08275 PF00072 Response regulator receiver domain D9E17_08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_08280 PF00512 His Kinase A (phospho-acceptor) domain D9E17_08280 PF00672 HAMP domain D9E17_08285 PF07690 Major Facilitator Superfamily D9E17_08290 PF00873 AcrB/AcrD/AcrF family D9E17_08295 PF00873 AcrB/AcrD/AcrF family D9E17_08300 PF13533 Biotin-lipoyl like D9E17_08320 PF00092 von Willebrand factor type A domain D9E17_08335 PF00012 Hsp70 protein D9E17_08340 PF00730 HhH-GPD superfamily base excision DNA repair protein D9E17_08340 PF06029 AlkA N-terminal domain D9E17_08345 PF08447 PAS fold D9E17_08345 PF05231 MASE1 D9E17_08345 PF00990 Diguanylate cyclase, GGDEF domain D9E17_08345 PF08448 PAS fold D9E17_08345 PF13426 PAS domain D9E17_08345 PF00563 EAL domain D9E17_08350 PF00485 Phosphoribulokinase / Uridine kinase family D9E17_08355 PF00692 dUTPase D9E17_08360 PF05170 AsmA family D9E17_08365 PF00571 CBS domain D9E17_08365 PF03471 Transporter associated domain D9E17_08365 PF03741 Integral membrane protein TerC family D9E17_08370 PF00483 Nucleotidyl transferase D9E17_08375 PF01569 PAP2 superfamily D9E17_08385 PF14052 Capsule assembly protein Wzi D9E17_08390 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D9E17_08390 PF10531 SLBB domain D9E17_08390 PF02563 Polysaccharide biosynthesis/export protein D9E17_08395 PF01451 Low molecular weight phosphotyrosine protein phosphatase D9E17_08400 PF13807 G-rich domain on putative tyrosine kinase D9E17_08400 PF02706 Chain length determinant protein D9E17_08400 PF13614 AAA domain D9E17_08405 PF13439 Glycosyltransferase Family 4 D9E17_08405 PF00534 Glycosyl transferases group 1 D9E17_08415 PF04932 O-Antigen ligase D9E17_08420 PF00534 Glycosyl transferases group 1 D9E17_08420 PF13439 Glycosyltransferase Family 4 D9E17_08435 PF01501 Glycosyl transferase family 8 D9E17_08435 PF00535 Glycosyl transferase family 2 D9E17_08445 PF02397 Bacterial sugar transferase D9E17_08450 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D9E17_08450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9E17_08455 PF00483 Nucleotidyl transferase D9E17_08455 PF01050 Mannose-6-phosphate isomerase D9E17_08460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9E17_08460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9E17_08460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9E17_08460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9E17_08465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9E17_08465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9E17_08465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9E17_08485 PF00483 Nucleotidyl transferase D9E17_08485 PF01050 Mannose-6-phosphate isomerase D9E17_08490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9E17_08490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9E17_08490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9E17_08490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9E17_08500 PF00005 ABC transporter D9E17_08505 PF00069 Protein kinase domain D9E17_08505 PF13847 Methyltransferase domain D9E17_08510 PF00534 Glycosyl transferases group 1 D9E17_08510 PF13439 Glycosyltransferase Family 4 D9E17_08515 PF00862 Sucrose synthase D9E17_08515 PF00534 Glycosyl transferases group 1 D9E17_08525 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D9E17_08525 PF01502 Phosphoribosyl-AMP cyclohydrolase D9E17_08530 PF00977 Histidine biosynthesis protein D9E17_08535 PF00977 Histidine biosynthesis protein D9E17_08540 PF00117 Glutamine amidotransferase class-I D9E17_08545 PF00475 Imidazoleglycerol-phosphate dehydratase D9E17_08545 PF08645 Polynucleotide kinase 3 phosphatase D9E17_08550 PF00155 Aminotransferase class I and II D9E17_08555 PF00815 Histidinol dehydrogenase D9E17_08560 PF01634 ATP phosphoribosyltransferase D9E17_08560 PF08029 HisG, C-terminal domain D9E17_08570 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D9E17_08575 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D9E17_08580 PF01370 NAD dependent epimerase/dehydratase family D9E17_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_08585 PF03466 LysR substrate binding domain D9E17_08595 PF13520 Amino acid permease D9E17_08600 PF04143 Sulphur transport D9E17_08605 PF01206 Sulfurtransferase TusA D9E17_08610 PF00929 Exonuclease D9E17_08610 PF08411 Exonuclease C-terminal D9E17_08615 PF00768 D-alanyl-D-alanine carboxypeptidase D9E17_08615 PF07943 Penicillin-binding protein 5, C-terminal domain D9E17_08620 PF06445 GyrI-like small molecule binding domain D9E17_08625 PF04632 Fusaric acid resistance protein family D9E17_08630 PF04363 Protein of unknown function (DUF496) D9E17_08635 PF10662 Ethanolamine utilisation - propanediol utilisation D9E17_08645 PF01695 IstB-like ATP binding protein D9E17_08650 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A D9E17_08655 PF06174 Protein of unknown function (DUF987) D9E17_08660 PF04002 RadC-like JAB domain D9E17_08665 PF03230 Antirestriction protein D9E17_08675 PF05321 Haemolysin expression modulating protein D9E17_08730 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D9E17_08735 PF02654 Cobalamin-5-phosphate synthase D9E17_08740 PF02277 Phosphoribosyltransferase D9E17_08745 PF03734 L,D-transpeptidase catalytic domain D9E17_08745 PF17969 L,D-transpeptidase C-terminal domain D9E17_08755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_08755 PF03466 LysR substrate binding domain D9E17_08760 PF03466 LysR substrate binding domain D9E17_08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_08770 PF01554 MatE D9E17_08780 PF01709 Transcriptional regulator D9E17_08785 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D9E17_08785 PF01048 Phosphorylase superfamily D9E17_08790 PF00083 Sugar (and other) transporter D9E17_08790 PF07690 Major Facilitator Superfamily D9E17_08800 PF09134 Invasin, domain 3 D9E17_08800 PF11924 Inverse autotransporter, beta-domain D9E17_08800 PF02369 Bacterial Ig-like domain (group 1) D9E17_08805 PF11924 Inverse autotransporter, beta-domain D9E17_08805 PF09134 Invasin, domain 3 D9E17_08805 PF02369 Bacterial Ig-like domain (group 1) D9E17_08810 PF02369 Bacterial Ig-like domain (group 1) D9E17_08810 PF09134 Invasin, domain 3 D9E17_08810 PF11924 Inverse autotransporter, beta-domain D9E17_08815 PF02369 Bacterial Ig-like domain (group 1) D9E17_08815 PF11924 Inverse autotransporter, beta-domain D9E17_08815 PF09134 Invasin, domain 3 D9E17_08820 PF00593 TonB dependent receptor D9E17_08820 PF07715 TonB-dependent Receptor Plug Domain D9E17_08825 PF13193 AMP-binding enzyme C-terminal domain D9E17_08825 PF00501 AMP-binding enzyme D9E17_08830 PF00975 Thioesterase domain D9E17_08840 PF00698 Acyl transferase domain D9E17_08840 PF16197 Ketoacyl-synthetase C-terminal extension D9E17_08840 PF02801 Beta-ketoacyl synthase, C-terminal domain D9E17_08840 PF00109 Beta-ketoacyl synthase, N-terminal domain D9E17_08840 PF00668 Condensation domain D9E17_08840 PF00550 Phosphopantetheine attachment site D9E17_08845 PF00501 AMP-binding enzyme D9E17_08845 PF00668 Condensation domain D9E17_08845 PF00550 Phosphopantetheine attachment site D9E17_08845 PF08242 Methyltransferase domain D9E17_08855 PF00664 ABC transporter transmembrane region D9E17_08855 PF00005 ABC transporter D9E17_08855 PF04954 Siderophore-interacting protein D9E17_08855 PF08021 Siderophore-interacting FAD-binding domain D9E17_08860 PF00005 ABC transporter D9E17_08860 PF00664 ABC transporter transmembrane region D9E17_08865 PF07690 Major Facilitator Superfamily D9E17_08870 PF00425 chorismate binding enzyme D9E17_08875 PF13356 Arm DNA-binding domain D9E17_08875 PF00589 Phage integrase family D9E17_08885 PF06167 Glucose-regulated metallo-peptidase M90 D9E17_08895 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment D9E17_08900 PF01794 Ferric reductase like transmembrane component D9E17_08905 PF00174 Oxidoreductase molybdopterin binding domain D9E17_08910 PF00576 HIUase/Transthyretin family D9E17_08915 PF00072 Response regulator receiver domain D9E17_08915 PF00486 Transcriptional regulatory protein, C terminal D9E17_08920 PF00512 His Kinase A (phospho-acceptor) domain D9E17_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_08925 PF01965 DJ-1/PfpI family D9E17_08935 PF00267 Gram-negative porin D9E17_08950 PF01966 HD domain D9E17_08955 PF00145 C-5 cytosine-specific DNA methylase D9E17_08955 PF18284 DNA methylase N-terminal domain D9E17_08960 PF03852 DNA mismatch endonuclease Vsr D9E17_08965 PF00892 EamA-like transporter family D9E17_08970 PF05661 Protein of unknown function (DUF808) D9E17_08975 PF09926 Uncharacterized small protein (DUF2158) D9E17_08980 PF17151 Periplasmic sensor domain D9E17_08980 PF00990 Diguanylate cyclase, GGDEF domain D9E17_08990 PF10733 Protein of unknown function (DUF2525) D9E17_09000 PF10781 Dextransucrase DSRB D9E17_09005 PF00196 Bacterial regulatory proteins, luxR family D9E17_09010 PF01311 Bacterial export proteins, family 1 D9E17_09015 PF01313 Bacterial export proteins, family 3 D9E17_09020 PF00813 FliP family D9E17_09025 PF04347 Flagellar biosynthesis protein, FliO D9E17_09030 PF16973 Flagellar motor switch protein FliN N-terminal D9E17_09030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9E17_09035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9E17_09035 PF02154 Flagellar motor switch protein FliM D9E17_09040 PF03748 Flagellar basal body-associated protein FliL D9E17_09045 PF02120 Flagellar hook-length control protein FliK D9E17_09050 PF02050 Flagellar FliJ protein D9E17_09055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9E17_09055 PF18269 T3SS EscN ATPase C-terminal domain D9E17_09060 PF02108 Flagellar assembly protein FliH D9E17_09065 PF14842 FliG N-terminal domain D9E17_09065 PF14841 FliG middle domain D9E17_09065 PF01706 FliG C-terminal domain D9E17_09070 PF01514 Secretory protein of YscJ/FliF family D9E17_09070 PF08345 Flagellar M-ring protein C-terminal D9E17_09075 PF02049 Flagellar hook-basal body complex protein FliE D9E17_09085 PF02586 SOS response associated peptidase (SRAP) D9E17_09090 PF01206 Sulfurtransferase TusA D9E17_09095 PF04143 Sulphur transport D9E17_09100 PF13987 YedD-like protein D9E17_09105 PF02806 Alpha amylase, C-terminal all-beta domain D9E17_09105 PF00128 Alpha amylase, catalytic domain D9E17_09110 PF05400 Flagellar protein FliT D9E17_09115 PF02561 Flagellar protein FliS D9E17_09120 PF07195 Flagellar hook-associated protein 2 C-terminus D9E17_09120 PF02465 Flagellar hook-associated protein 2 N-terminus D9E17_09140 PF04539 Sigma-70 region 3 D9E17_09140 PF04542 Sigma-70 region 2 D9E17_09140 PF04545 Sigma-70, region 4 D9E17_09145 PF02899 Phage integrase, N-terminal SAM-like domain D9E17_09155 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_09170 PF03472 Autoinducer binding domain D9E17_09170 PF00196 Bacterial regulatory proteins, luxR family D9E17_09175 PF10769 Protein of unknown function (DUF2594) D9E17_09185 PF00072 Response regulator receiver domain D9E17_09185 PF00196 Bacterial regulatory proteins, luxR family D9E17_09190 PF02151 UvrB/uvrC motif D9E17_09190 PF08459 UvrC Helix-hairpin-helix N-terminal D9E17_09190 PF01541 GIY-YIG catalytic domain D9E17_09195 PF01066 CDP-alcohol phosphatidyltransferase D9E17_09215 PF02810 SEC-C motif D9E17_09215 PF03695 Uncharacterised protein family (UPF0149) D9E17_09220 PF03222 Tryptophan/tyrosine permease family D9E17_09225 PF10678 Protein of unknown function (DUF2492) D9E17_09230 PF00210 Ferritin-like domain D9E17_09235 PF13992 YecR-like lipoprotein D9E17_09250 PF10964 Protein of unknown function (DUF2766) D9E17_09255 PF00210 Ferritin-like domain D9E17_09260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9E17_09265 PF00005 ABC transporter D9E17_09270 PF02653 Branched-chain amino acid transport system / permease component D9E17_09275 PF02358 Trehalose-phosphatase D9E17_09280 PF00982 Glycosyltransferase family 20 D9E17_09285 PF00582 Universal stress protein family D9E17_09290 PF05247 Flagellar transcriptional activator (FlhD) D9E17_09295 PF05280 Flagellar transcriptional activator (FlhC) D9E17_09300 PF01618 MotA/TolQ/ExbB proton channel family D9E17_09305 PF13677 Membrane MotB of proton-channel complex MotA/MotB D9E17_09305 PF00691 OmpA family D9E17_09310 PF01627 Hpt domain D9E17_09310 PF02895 Signal transducing histidine kinase, homodimeric domain D9E17_09310 PF09078 CheY binding D9E17_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_09310 PF01584 CheW-like domain D9E17_09320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9E17_09320 PF00672 HAMP domain D9E17_09320 PF02203 Tar ligand binding domain homologue D9E17_09330 PF01739 CheR methyltransferase, SAM binding domain D9E17_09330 PF03705 CheR methyltransferase, all-alpha domain D9E17_09335 PF00072 Response regulator receiver domain D9E17_09335 PF01339 CheB methylesterase D9E17_09340 PF00072 Response regulator receiver domain D9E17_09345 PF04344 Chemotaxis phosphatase, CheZ D9E17_09350 PF01312 FlhB HrpN YscU SpaS Family D9E17_09355 PF00771 FHIPEP family D9E17_09360 PF06366 Flagellar protein FlhE D9E17_09365 PF07007 Lysozyme inhibitor LprI D9E17_09370 PF05746 DALR anticodon binding domain D9E17_09370 PF03485 Arginyl tRNA synthetase N terminal domain D9E17_09370 PF00750 tRNA synthetases class I (R) D9E17_09375 PF06185 YecM protein D9E17_09380 PF03932 CutC family D9E17_09385 PF03264 NapC/NirT cytochrome c family, N-terminal region D9E17_09390 PF01568 Molydopterin dinucleotide binding domain D9E17_09390 PF18364 Molybdopterin oxidoreductase N-terminal domain D9E17_09390 PF00384 Molybdopterin oxidoreductase D9E17_09395 PF08003 Protein of unknown function (DUF1698) D9E17_09400 PF13649 Methyltransferase domain D9E17_09405 PF01124 MAPEG family D9E17_09410 PF01904 Protein of unknown function DUF72 D9E17_09440 PF06440 DNA polymerase III, theta subunit D9E17_09490 PF00717 Peptidase S24-like D9E17_09495 PF00857 Isochorismatase family D9E17_09500 PF02938 GAD domain D9E17_09500 PF00152 tRNA synthetases class II (D, K and N) D9E17_09500 PF01336 OB-fold nucleic acid binding domain D9E17_09505 PF00293 NUDIX domain D9E17_09510 PF01709 Transcriptional regulator D9E17_09515 PF02075 Crossover junction endodeoxyribonuclease RuvC D9E17_09520 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family D9E17_09530 PF01330 RuvA N terminal domain D9E17_09530 PF07499 RuvA, C-terminal domain D9E17_09535 PF17864 RuvB AAA lid domain D9E17_09535 PF05496 Holliday junction DNA helicase RuvB P-loop domain D9E17_09535 PF05491 RuvB C-terminal winged helix domain D9E17_09540 PF00950 ABC 3 transport family D9E17_09545 PF00005 ABC transporter D9E17_09550 PF01297 Zinc-uptake complex component A periplasmic D9E17_09555 PF08525 Opacity-associated protein A N-terminal motif D9E17_09555 PF01551 Peptidase family M23 D9E17_09555 PF01476 LysM domain D9E17_09560 PF03279 Bacterial lipid A biosynthesis acyltransferase D9E17_09565 PF02887 Pyruvate kinase, alpha/beta domain D9E17_09565 PF00224 Pyruvate kinase, barrel domain D9E17_09570 PF01418 Helix-turn-helix domain, rpiR family D9E17_09570 PF01380 SIS domain D9E17_09575 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D9E17_09575 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D9E17_09580 PF00920 Dehydratase family D9E17_09585 PF01081 KDPG and KHG aldolase D9E17_09590 PF02222 ATP-grasp domain D9E17_09595 PF07130 YebG protein D9E17_09600 PF13995 YebF-like protein D9E17_09605 PF04391 Protein of unknown function (DUF533) D9E17_09610 PF00326 Prolyl oligopeptidase family D9E17_09610 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D9E17_09615 PF00929 Exonuclease D9E17_09620 PF00795 Carbon-nitrogen hydrolase D9E17_09625 PF06440 DNA polymerase III, theta subunit D9E17_09630 PF04234 CopC domain D9E17_09635 PF05425 Copper resistance protein D D9E17_09640 PF10709 Protein of unknown function (DUF2511) D9E17_09645 PF00149 Calcineurin-like phosphoesterase D9E17_09650 PF07358 Protein of unknown function (DUF1482) D9E17_09655 PF07351 Protein of unknown function (DUF1480) D9E17_09660 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D9E17_09660 PF01189 16S rRNA methyltransferase RsmB/F D9E17_09660 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D9E17_09665 PF02470 MlaD protein D9E17_09670 PF04403 Paraquat-inducible protein A D9E17_09675 PF13185 GAF domain D9E17_09680 PF17516 ProQ C-terminal domain D9E17_09680 PF04352 ProQ/FINO family D9E17_09685 PF11818 C-terminal domain of tail specific protease (DUF3340) D9E17_09685 PF03572 Peptidase family S41 D9E17_09685 PF17804 Tail specific protease N-terminal domain D9E17_09685 PF00595 PDZ domain D9E17_09690 PF01435 Peptidase family M48 D9E17_09695 PF07690 Major Facilitator Superfamily D9E17_09700 PF01614 Bacterial transcriptional regulator D9E17_09700 PF09339 IclR helix-turn-helix domain D9E17_09705 PF13996 YobH-like protein D9E17_09710 PF13998 MgrB protein D9E17_09715 PF13974 YebO-like protein D9E17_09720 PF10736 Protein of unknown function (DUF2627) D9E17_09725 PF00313 'Cold-shock' DNA-binding domain D9E17_09730 PF13847 Methyltransferase domain D9E17_09735 PF02659 Putative manganese efflux pump D9E17_09740 PF06173 Protein of unknown function (DUF986) D9E17_09745 PF03613 PTS system mannose/fructose/sorbose family IID component D9E17_09750 PF03609 PTS system sorbose-specific iic component D9E17_09755 PF03830 PTS system sorbose subfamily IIB component D9E17_09755 PF03610 PTS system fructose IIA component D9E17_09760 PF03741 Integral membrane protein TerC family D9E17_09760 PF03471 Transporter associated domain D9E17_09765 PF00563 EAL domain D9E17_09765 PF12792 CSS motif domain associated with EAL D9E17_09770 PF03313 Serine dehydratase alpha chain D9E17_09770 PF03315 Serine dehydratase beta chain D9E17_09775 PF00293 NUDIX domain D9E17_09780 PF00425 chorismate binding enzyme D9E17_09780 PF04715 Anthranilate synthase component I, N terminal region D9E17_09785 PF03701 Uncharacterised protein family (UPF0181) D9E17_09790 PF08986 Domain of unknown function (DUF1889) D9E17_09795 PF01042 Endoribonuclease L-PSP D9E17_09800 PF04851 Type III restriction enzyme, res subunit D9E17_09800 PF13307 Helicase C-terminal domain D9E17_09805 PF00814 Glycoprotease family D9E17_09810 PF03843 Outer membrane lipoprotein Slp family D9E17_09815 PF00501 AMP-binding enzyme D9E17_09815 PF13193 AMP-binding enzyme C-terminal domain D9E17_09820 PF01612 3'-5' exonuclease D9E17_09820 PF00570 HRDC domain D9E17_09825 PF00970 Oxidoreductase FAD-binding domain D9E17_09825 PF00175 Oxidoreductase NAD-binding domain D9E17_09825 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_09830 PF00355 Rieske [2Fe-2S] domain D9E17_09830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D9E17_09835 PF02028 BCCT, betaine/carnitine/choline family transporter D9E17_09840 PF00180 Isocitrate/isopropylmalate dehydrogenase D9E17_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_09845 PF03466 LysR substrate binding domain D9E17_09850 PF01810 LysE type translocator D9E17_09855 PF09313 Domain of unknown function (DUF1971) D9E17_09860 PF08956 Domain of unknown function (DUF1869) D9E17_09865 PF04226 Transglycosylase associated protein D9E17_09880 PF00990 Diguanylate cyclase, GGDEF domain D9E17_09880 PF13185 GAF domain D9E17_09885 PF03891 Domain of unknown function (DUF333) D9E17_09890 PF04343 Protein of unknown function, DUF488 D9E17_09895 PF07690 Major Facilitator Superfamily D9E17_09900 PF02311 AraC-like ligand binding domain D9E17_09900 PF12833 Helix-turn-helix domain D9E17_09905 PF04284 Protein of unknown function (DUF441) D9E17_09915 PF04073 Aminoacyl-tRNA editing domain D9E17_09920 PF17155 Gammaproteobacterial periplasmic sensor domain D9E17_09920 PF00990 Diguanylate cyclase, GGDEF domain D9E17_09925 PF00990 Diguanylate cyclase, GGDEF domain D9E17_09925 PF17158 Membrane-associated sensor, integral membrane domain D9E17_09930 PF04285 Protein of unknown function (DUF444) D9E17_09935 PF08298 PrkA AAA domain D9E17_09935 PF06798 PrkA serine protein kinase C-terminal domain D9E17_09940 PF06629 MltA-interacting protein MipA D9E17_09945 PF00248 Aldo/keto reductase family D9E17_09950 PF01263 Aldose 1-epimerase D9E17_09955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D9E17_09955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D9E17_09960 PF01641 SelR domain D9E17_09965 PF07023 Protein of unknown function (DUF1315) D9E17_09970 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_09970 PF00107 Zinc-binding dehydrogenase D9E17_09975 PF00083 Sugar (and other) transporter D9E17_09980 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_09980 PF00107 Zinc-binding dehydrogenase D9E17_09985 PF01116 Fructose-bisphosphate aldolase class-II D9E17_09990 PF00294 pfkB family carbohydrate kinase D9E17_09995 PF00248 Aldo/keto reductase family D9E17_10000 PF08220 DeoR-like helix-turn-helix domain D9E17_10000 PF00455 DeoR C terminal sensor domain D9E17_10020 PF00857 Isochorismatase family D9E17_10025 PF17763 Glutaminase/Asparaginase C-terminal domain D9E17_10025 PF00710 Asparaginase, N-terminal D9E17_10030 PF01343 Peptidase family S49 D9E17_10035 PF00881 Nitroreductase family D9E17_10040 PF00586 AIR synthase related protein, N-terminal domain D9E17_10040 PF02769 AIR synthase related protein, C-terminal domain D9E17_10045 PF01131 DNA topoisomerase D9E17_10045 PF01751 Toprim domain D9E17_10050 PF00012 Hsp70 protein D9E17_10055 PF00684 DnaJ central domain D9E17_10055 PF01556 DnaJ C terminal domain D9E17_10055 PF00226 DnaJ domain D9E17_10060 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D9E17_10060 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D9E17_10065 PF07383 Protein of unknown function (DUF1496) D9E17_10070 PF00293 NUDIX domain D9E17_10075 PF01066 CDP-alcohol phosphatidyltransferase D9E17_10080 PF00581 Rhodanese-like domain D9E17_10085 PF00005 ABC transporter D9E17_10090 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_10095 PF13416 Bacterial extracellular solute-binding protein D9E17_10100 PF02627 Carboxymuconolactone decarboxylase family D9E17_10105 PF09335 SNARE associated Golgi protein D9E17_10115 PF09335 SNARE associated Golgi protein D9E17_10120 PF03372 Endonuclease/Exonuclease/phosphatase family D9E17_10125 PF00202 Aminotransferase class-III D9E17_10130 PF04958 Arginine N-succinyltransferase beta subunit D9E17_10135 PF00171 Aldehyde dehydrogenase family D9E17_10140 PF04996 Succinylarginine dihydrolase D9E17_10145 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D9E17_10150 PF07813 LTXXQ motif family protein D9E17_10155 PF05962 HutD D9E17_10165 PF02540 NAD synthase D9E17_10170 PF04355 SmpA / OmlA family D9E17_10175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_10180 PF02378 Phosphotransferase system, EIIC D9E17_10185 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D9E17_10190 PF07883 Cupin domain D9E17_10190 PF12833 Helix-turn-helix domain D9E17_10195 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9E17_10195 PF02056 Family 4 glycosyl hydrolase D9E17_10200 PF04794 YdjC-like protein D9E17_10205 PF18011 C-terminal domain found in long catalases D9E17_10205 PF00199 Catalase D9E17_10205 PF06628 Catalase-related immune-responsive D9E17_10210 PF10729 Cell division activator CedA D9E17_10225 PF04307 LexA-binding, inner membrane-associated putative hydrolase D9E17_10230 PF13419 Haloacid dehalogenase-like hydrolase D9E17_10235 PF14002 YniB-like protein D9E17_10245 PF11080 Endoribonuclease GhoS D9E17_10250 PF00294 pfkB family carbohydrate kinase D9E17_10255 PF04338 Protein of unknown function, DUF481 D9E17_10270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D9E17_10270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9E17_10270 PF03129 Anticodon binding domain D9E17_10270 PF02824 TGS domain D9E17_10275 PF00707 Translation initiation factor IF-3, C-terminal domain D9E17_10275 PF05198 Translation initiation factor IF-3, N-terminal domain D9E17_10280 PF01632 Ribosomal protein L35 D9E17_10285 PF00453 Ribosomal protein L20 D9E17_10295 PF01409 tRNA synthetases class II core domain (F) D9E17_10295 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D9E17_10300 PF03483 B3/4 domain D9E17_10300 PF03484 tRNA synthetase B5 domain D9E17_10300 PF03147 Ferredoxin-fold anticodon binding domain D9E17_10300 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D9E17_10300 PF01588 Putative tRNA binding domain D9E17_10305 PF00216 Bacterial DNA-binding protein D9E17_10310 PF01032 FecCD transport family D9E17_10315 PF00255 Glutathione peroxidase D9E17_10320 PF00005 ABC transporter D9E17_10325 PF00877 NlpC/P60 family D9E17_10330 PF00563 EAL domain D9E17_10335 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D9E17_10340 PF10636 Hemin uptake protein hemP D9E17_10345 PF00793 DAHP synthetase I family D9E17_10350 PF03618 Kinase/pyrophosphorylase D9E17_10355 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D9E17_10355 PF02896 PEP-utilising enzyme, TIM barrel domain D9E17_10355 PF00391 PEP-utilising enzyme, mobile domain D9E17_10360 PF00501 AMP-binding enzyme D9E17_10360 PF13193 AMP-binding enzyme C-terminal domain D9E17_10370 PF01494 FAD binding domain D9E17_10375 PF01012 Electron transfer flavoprotein domain D9E17_10375 PF00766 Electron transfer flavoprotein FAD-binding domain D9E17_10380 PF01012 Electron transfer flavoprotein domain D9E17_10385 PF12833 Helix-turn-helix domain D9E17_10385 PF02311 AraC-like ligand binding domain D9E17_10390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9E17_10390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9E17_10390 PF02770 Acyl-CoA dehydrogenase, middle domain D9E17_10395 PF01144 Coenzyme A transferase D9E17_10400 PF01487 Type I 3-dehydroquinase D9E17_10405 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D9E17_10405 PF08501 Shikimate dehydrogenase substrate binding domain D9E17_10410 PF07690 Major Facilitator Superfamily D9E17_10415 PF07690 Major Facilitator Superfamily D9E17_10420 PF08965 Domain of unknown function (DUF1870) D9E17_10430 PF01594 AI-2E family transporter D9E17_10435 PF13183 4Fe-4S dicluster domain D9E17_10435 PF01565 FAD binding domain D9E17_10435 PF02913 FAD linked oxidases, C-terminal domain D9E17_10440 PF03061 Thioesterase superfamily D9E17_10445 PF15930 Domain of unknown function D9E17_10450 PF01521 Iron-sulphur cluster biosynthesis D9E17_10455 PF01458 Uncharacterized protein family (UPF0051) D9E17_10460 PF00005 ABC transporter D9E17_10465 PF01458 Uncharacterized protein family (UPF0051) D9E17_10470 PF00266 Aminotransferase class-V D9E17_10475 PF02657 Fe-S metabolism associated domain D9E17_10480 PF03734 L,D-transpeptidase catalytic domain D9E17_10480 PF01476 LysM domain D9E17_10480 PF17969 L,D-transpeptidase C-terminal domain D9E17_10485 PF04728 Lipoprotein leucine-zipper D9E17_10490 PF02887 Pyruvate kinase, alpha/beta domain D9E17_10490 PF00224 Pyruvate kinase, barrel domain D9E17_10495 PF10965 Protein of unknown function (DUF2767) D9E17_10500 PF13247 4Fe-4S dicluster domain D9E17_10500 PF12800 4Fe-4S binding domain D9E17_10505 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain D9E17_10505 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 D9E17_10515 PF13247 4Fe-4S dicluster domain D9E17_10520 PF01292 Prokaryotic cytochrome b561 D9E17_10530 PF13454 FAD-NAD(P)-binding D9E17_10535 PF08803 Putative mono-oxygenase ydhR D9E17_10550 PF16168 Adhesin of bacterial autotransporter system, probable stalk D9E17_10550 PF03212 Pertactin D9E17_10555 PF01554 MatE D9E17_10560 PF00677 Lumazine binding domain D9E17_10570 PF07690 Major Facilitator Superfamily D9E17_10575 PF03466 LysR substrate binding domain D9E17_10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_10580 PF00356 Bacterial regulatory proteins, lacI family D9E17_10590 PF07690 Major Facilitator Superfamily D9E17_10595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D9E17_10595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D9E17_10600 PF00877 NlpC/P60 family D9E17_10605 PF00462 Glutaredoxin D9E17_10610 PF08494 DEAD/H associated D9E17_10610 PF00271 Helicase conserved C-terminal domain D9E17_10610 PF00270 DEAD/DEAH box helicase D9E17_10615 PF00929 Exonuclease D9E17_10620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9E17_10625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D9E17_10630 PF00440 Bacterial regulatory proteins, tetR family D9E17_10630 PF16925 Tetracyclin repressor-like, C-terminal domain D9E17_10635 PF06945 Protein of unknown function (DUF1289) D9E17_10640 PF00248 Aldo/keto reductase family D9E17_10645 PF00080 Copper/zinc superoxide dismutase (SODC) D9E17_10650 PF04632 Fusaric acid resistance protein family D9E17_10655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_10655 PF00529 HlyD membrane-fusion protein of T1SS D9E17_10660 PF07869 Protein of unknown function (DUF1656) D9E17_10665 PF01047 MarR family D9E17_10670 PF05433 Glycine zipper 2TM domain D9E17_10675 PF03702 Anhydro-N-acetylmuramic acid kinase D9E17_10680 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme D9E17_10685 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D9E17_10685 PF01243 Pyridoxamine 5'-phosphate oxidase D9E17_10690 PF01479 S4 domain D9E17_10690 PF00579 tRNA synthetases class I (W and Y) D9E17_10695 PF08543 Phosphomethylpyrimidine kinase D9E17_10700 PF02798 Glutathione S-transferase, N-terminal domain D9E17_10700 PF00043 Glutathione S-transferase, C-terminal domain D9E17_10705 PF00854 POT family D9E17_10710 PF00633 Helix-hairpin-helix motif D9E17_10710 PF00730 HhH-GPD superfamily base excision DNA repair protein D9E17_10710 PF10576 Iron-sulfur binding domain of endonuclease III D9E17_10715 PF02508 Rnf-Nqr subunit, membrane protein D9E17_10720 PF04205 FMN-binding domain D9E17_10725 PF03116 NQR2, RnfD, RnfE family D9E17_10730 PF10531 SLBB domain D9E17_10730 PF13375 RnfC Barrel sandwich hybrid domain D9E17_10730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D9E17_10730 PF12838 4Fe-4S dicluster domain D9E17_10735 PF04060 Putative Fe-S cluster D9E17_10740 PF02508 Rnf-Nqr subunit, membrane protein D9E17_10745 PF10754 Protein of unknown function (DUF2569) D9E17_10750 PF05321 Haemolysin expression modulating protein D9E17_10760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9E17_10760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9E17_10765 PF00962 Adenosine/AMP deaminase D9E17_10770 PF00155 Aminotransferase class I and II D9E17_10775 PF02378 Phosphotransferase system, EIIC D9E17_10775 PF00367 phosphotransferase system, EIIB D9E17_10780 PF00356 Bacterial regulatory proteins, lacI family D9E17_10780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9E17_10790 PF00440 Bacterial regulatory proteins, tetR family D9E17_10795 PF00703 Glycosyl hydrolases family 2 D9E17_10795 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D9E17_10795 PF02837 Glycosyl hydrolases family 2, sugar binding domain D9E17_10805 PF03573 outer membrane porin, OprD family D9E17_10820 PF06097 Bacterial protein of unknown function (DUF945) D9E17_10825 PF01238 Phosphomannose isomerase type I D9E17_10830 PF05683 Fumarase C-terminus D9E17_10830 PF05681 Fumarate hydratase (Fumerase) D9E17_10835 PF10415 Fumarase C C-terminus D9E17_10835 PF00206 Lyase D9E17_10840 PF05472 DNA replication terminus site-binding protein (Ter protein) D9E17_10845 PF00672 HAMP domain D9E17_10845 PF00512 His Kinase A (phospho-acceptor) domain D9E17_10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_10850 PF00486 Transcriptional regulatory protein, C terminal D9E17_10850 PF00072 Response regulator receiver domain D9E17_10855 PF06942 GlpM protein D9E17_10865 PF13520 Amino acid permease D9E17_10870 PF07338 Protein of unknown function (DUF1471) D9E17_10875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D9E17_10875 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D9E17_10875 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D9E17_10880 PF02233 NAD(P) transhydrogenase beta subunit D9E17_10885 PF01594 AI-2E family transporter D9E17_10895 PF00893 Small Multidrug Resistance protein D9E17_10900 PF00893 Small Multidrug Resistance protein D9E17_10905 PF00089 Trypsin D9E17_10920 PF07690 Major Facilitator Superfamily D9E17_10925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_10925 PF03466 LysR substrate binding domain D9E17_10930 PF00480 ROK family D9E17_10940 PF00654 Voltage gated chloride channel D9E17_10945 PF02613 Nitrate reductase delta subunit D9E17_10950 PF04976 DMSO reductase anchor subunit (DmsC) D9E17_10955 PF12800 4Fe-4S binding domain D9E17_10955 PF13247 4Fe-4S dicluster domain D9E17_10960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9E17_10960 PF00384 Molybdopterin oxidoreductase D9E17_10960 PF01568 Molydopterin dinucleotide binding domain D9E17_10965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9E17_10965 PF00384 Molybdopterin oxidoreductase D9E17_10965 PF01568 Molydopterin dinucleotide binding domain D9E17_10970 PF06649 Protein of unknown function (DUF1161) D9E17_10975 PF06788 Uncharacterised protein family (UPF0257) D9E17_10980 PF13302 Acetyltransferase (GNAT) domain D9E17_10985 PF06932 Protein of unknown function (DUF1283) D9E17_10990 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D9E17_10995 PF13378 Enolase C-terminal domain-like D9E17_10995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9E17_11000 PF00107 Zinc-binding dehydrogenase D9E17_11000 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_11010 PF00589 Phage integrase family D9E17_11010 PF12167 Arm DNA-binding domain D9E17_11025 PF07358 Protein of unknown function (DUF1482) D9E17_11030 PF05358 DicB protein D9E17_11040 PF03589 Antitermination protein D9E17_11050 PF00313 'Cold-shock' DNA-binding domain D9E17_11055 PF00313 'Cold-shock' DNA-binding domain D9E17_11060 PF04971 Bacteriophage P21 holin S D9E17_11065 PF07041 Protein of unknown function (DUF1327) D9E17_11070 PF00959 Phage lysozyme D9E17_11075 PF10721 Protein of unknown function (DUF2514) D9E17_11080 PF00313 'Cold-shock' DNA-binding domain D9E17_11095 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system D9E17_11110 PF13132 Domain of unknown function (DUF3950) D9E17_11115 PF07471 Phage DNA packaging protein Nu1 D9E17_11130 PF02413 Caudovirales tail fibre assembly protein, lambda gpK D9E17_11135 PF02796 Helix-turn-helix domain of resolvase D9E17_11135 PF00239 Resolvase, N terminal domain D9E17_11150 PF07690 Major Facilitator Superfamily D9E17_11150 PF00083 Sugar (and other) transporter D9E17_11155 PF08125 Mannitol dehydrogenase C-terminal domain D9E17_11155 PF01232 Mannitol dehydrogenase Rossmann domain D9E17_11160 PF14001 YdfZ protein D9E17_11165 PF07729 FCD domain D9E17_11165 PF00392 Bacterial regulatory proteins, gntR family D9E17_11170 PF00106 short chain dehydrogenase D9E17_11175 PF01432 Peptidase family M3 D9E17_11180 PF02464 Competence-damaged protein D9E17_11185 PF04076 Bacterial OB fold (BOF) protein D9E17_11190 PF00990 Diguanylate cyclase, GGDEF domain D9E17_11200 PF07690 Major Facilitator Superfamily D9E17_11205 PF00892 EamA-like transporter family D9E17_11210 PF13999 MarB protein D9E17_11215 PF12833 Helix-turn-helix domain D9E17_11220 PF01047 MarR family D9E17_11225 PF01914 MarC family integral membrane protein D9E17_11230 PF07690 Major Facilitator Superfamily D9E17_11240 PF03466 LysR substrate binding domain D9E17_11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_11245 PF00171 Aldehyde dehydrogenase family D9E17_11250 PF04960 Glutaminase D9E17_11255 PF13811 Domain of unknown function (DUF4186) D9E17_11260 PF00990 Diguanylate cyclase, GGDEF domain D9E17_11265 PF01232 Mannitol dehydrogenase Rossmann domain D9E17_11265 PF08125 Mannitol dehydrogenase C-terminal domain D9E17_11270 PF01062 Bestrophin, RFP-TM, chloride channel D9E17_11275 PF13649 Methyltransferase domain D9E17_11280 PF03992 Antibiotic biosynthesis monooxygenase D9E17_11285 PF01791 DeoC/LacD family aldolase D9E17_11290 PF13407 Periplasmic binding protein domain D9E17_11295 PF02653 Branched-chain amino acid transport system / permease component D9E17_11300 PF02653 Branched-chain amino acid transport system / permease component D9E17_11305 PF00005 ABC transporter D9E17_11310 PF04198 Putative sugar-binding domain D9E17_11320 PF13018 Extended Signal Peptide of Type V secretion system D9E17_11325 PF01381 Helix-turn-helix D9E17_11330 PF13657 HipA N-terminal domain D9E17_11330 PF07804 HipA-like C-terminal domain D9E17_11345 PF00419 Fimbrial protein D9E17_11350 PF00419 Fimbrial protein D9E17_11355 PF09160 FimH, mannose binding D9E17_11360 PF00384 Molybdopterin oxidoreductase D9E17_11365 PF17073 Two-component-system connector protein D9E17_11370 PF12833 Helix-turn-helix domain D9E17_11375 PF00884 Sulfatase D9E17_11380 PF13186 Iron-sulfur cluster-binding domain D9E17_11380 PF04055 Radical SAM superfamily D9E17_11390 PF00005 ABC transporter D9E17_11390 PF06472 ABC transporter transmembrane region 2 D9E17_11395 PF07715 TonB-dependent Receptor Plug Domain D9E17_11400 PF00675 Insulinase (Peptidase family M16) D9E17_11400 PF05193 Peptidase M16 inactive domain D9E17_11405 PF00282 Pyridoxal-dependent decarboxylase conserved domain D9E17_11410 PF13520 Amino acid permease D9E17_11420 PF00990 Diguanylate cyclase, GGDEF domain D9E17_11425 PF00990 Diguanylate cyclase, GGDEF domain D9E17_11425 PF00563 EAL domain D9E17_11425 PF13426 PAS domain D9E17_11430 PF01427 D-ala-D-ala dipeptidase D9E17_11435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_11440 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_11445 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_11445 PF12911 N-terminal TM domain of oligopeptide transport permease C D9E17_11450 PF00005 ABC transporter D9E17_11450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_11455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_11455 PF00005 ABC transporter D9E17_11460 PF02566 OsmC-like protein D9E17_11465 PF10684 Putative biofilm-dependent modulation protein D9E17_11470 PF08136 30S ribosomal protein subunit S22 family D9E17_11475 PF03949 Malic enzyme, NAD binding domain D9E17_11475 PF00390 Malic enzyme, N-terminal domain D9E17_11480 PF00107 Zinc-binding dehydrogenase D9E17_11480 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_11485 PF01381 Helix-turn-helix D9E17_11490 PF01292 Prokaryotic cytochrome b561 D9E17_11495 PF09163 Formate dehydrogenase N, transmembrane D9E17_11495 PF12800 4Fe-4S binding domain D9E17_11495 PF13247 4Fe-4S dicluster domain D9E17_11505 PF00892 EamA-like transporter family D9E17_11515 PF07690 Major Facilitator Superfamily D9E17_11520 PF00384 Molybdopterin oxidoreductase D9E17_11520 PF01568 Molydopterin dinucleotide binding domain D9E17_11520 PF14710 Respiratory nitrate reductase alpha N-terminal D9E17_11525 PF13247 4Fe-4S dicluster domain D9E17_11525 PF14711 Respiratory nitrate reductase beta C-terminal D9E17_11530 PF02613 Nitrate reductase delta subunit D9E17_11535 PF02665 Nitrate reductase gamma subunit D9E17_11540 PF02567 Phenazine biosynthesis-like protein D9E17_11545 PF00797 N-acetyltransferase D9E17_11550 PF01613 Flavin reductase like domain D9E17_11555 PF01361 Tautomerase enzyme D9E17_11585 PF04717 Type VI secretion system, phage-baseplate injector D9E17_11590 PF17520 Family of unknown function (DUF5445) D9E17_11595 PF13417 Glutathione S-transferase, N-terminal domain D9E17_11600 PF00324 Amino acid permease D9E17_11610 PF07715 TonB-dependent Receptor Plug Domain D9E17_11610 PF00593 TonB dependent receptor D9E17_11615 PF07729 FCD domain D9E17_11615 PF00392 Bacterial regulatory proteins, gntR family D9E17_11620 PF00107 Zinc-binding dehydrogenase D9E17_11620 PF16884 N-terminal domain of oxidoreductase D9E17_11625 PF00583 Acetyltransferase (GNAT) family D9E17_11630 PF04657 Putative inner membrane exporter, YdcZ D9E17_11635 PF10735 Protein of unknown function (DUF2526) D9E17_11640 PF10753 Toxin GhoT_OrtT D9E17_11650 PF00171 Aldehyde dehydrogenase family D9E17_11655 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_11660 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_11665 PF00005 ABC transporter D9E17_11665 PF08402 TOBE domain D9E17_11670 PF13416 Bacterial extracellular solute-binding protein D9E17_11675 PF00155 Aminotransferase class I and II D9E17_11675 PF00392 Bacterial regulatory proteins, gntR family D9E17_11680 PF01381 Helix-turn-helix D9E17_11680 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system D9E17_11690 PF10829 Protein of unknown function (DUF2554) D9E17_11700 PF07883 Cupin domain D9E17_11700 PF01381 Helix-turn-helix D9E17_11705 PF03594 Benzoate membrane transport protein D9E17_11710 PF07282 Putative transposase DNA-binding domain D9E17_11710 PF12323 Helix-turn-helix domain D9E17_11710 PF01385 Probable transposase D9E17_11720 PF11769 Protein of unknown function (DUF3313) D9E17_11725 PF03848 Tellurite resistance protein TehB D9E17_11730 PF03595 Voltage-dependent anion channel D9E17_11735 PF18836 Beta solenoid repeat from YDCK D9E17_11740 PF13302 Acetyltransferase (GNAT) domain D9E17_11745 PF04325 Protein of unknown function (DUF465) D9E17_11750 PF04349 Periplasmic glucan biosynthesis protein, MdoG D9E17_11755 PF07063 Domain of unknown function (DUF1338) D9E17_11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_11760 PF03466 LysR substrate binding domain D9E17_11765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9E17_11765 PF02203 Tar ligand binding domain homologue D9E17_11765 PF00672 HAMP domain D9E17_11775 PF01848 Hok/gef family D9E17_11785 PF01292 Prokaryotic cytochrome b561 D9E17_11790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D9E17_11790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D9E17_11795 PF00171 Aldehyde dehydrogenase family D9E17_11800 PF02698 DUF218 domain D9E17_11805 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D9E17_11805 PF00271 Helicase conserved C-terminal domain D9E17_11805 PF00270 DEAD/DEAH box helicase D9E17_11805 PF11898 Domain of unknown function (DUF3418) D9E17_11805 PF04408 Helicase associated domain (HA2) D9E17_11810 PF02525 Flavodoxin-like fold D9E17_11815 PF00782 Dual specificity phosphatase, catalytic domain D9E17_11820 PF12147 Putative methyltransferase D9E17_11820 PF12146 Serine aminopeptidase, S33 D9E17_11830 PF01066 CDP-alcohol phosphatidyltransferase D9E17_11835 PF10971 Protein of unknown function (DUF2773) D9E17_11860 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_11865 PF08223 PaaX-like protein C-terminal domain D9E17_11865 PF07848 PaaX-like protein D9E17_11870 PF14535 AMP-binding enzyme C-terminal domain D9E17_11870 PF00501 AMP-binding enzyme D9E17_11875 PF00108 Thiolase, N-terminal domain D9E17_11875 PF02803 Thiolase, C-terminal domain D9E17_11880 PF03061 Thioesterase superfamily D9E17_11885 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain D9E17_11885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D9E17_11885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D9E17_11890 PF00378 Enoyl-CoA hydratase/isomerase D9E17_11895 PF00378 Enoyl-CoA hydratase/isomerase D9E17_11900 PF00970 Oxidoreductase FAD-binding domain D9E17_11900 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_11900 PF00175 Oxidoreductase NAD-binding domain D9E17_11905 PF01883 Iron-sulfur cluster assembly protein D9E17_11910 PF05138 Phenylacetic acid catabolic protein D9E17_11915 PF06243 Phenylacetic acid degradation B D9E17_11920 PF05138 Phenylacetic acid catabolic protein D9E17_11925 PF00171 Aldehyde dehydrogenase family D9E17_11925 PF01575 MaoC like domain D9E17_11930 PF02728 Copper amine oxidase, N3 domain D9E17_11930 PF02727 Copper amine oxidase, N2 domain D9E17_11930 PF01179 Copper amine oxidase, enzyme domain D9E17_11930 PF07833 Copper amine oxidase N-terminal domain D9E17_11935 PF00171 Aldehyde dehydrogenase family D9E17_11940 PF12833 Helix-turn-helix domain D9E17_11940 PF14525 AraC-binding-like domain D9E17_11945 PF07027 Protein of unknown function (DUF1318) D9E17_11950 PF13617 YnbE-like lipoprotein D9E17_11955 PF11739 Dicarboxylate transport D9E17_11960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D9E17_11960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9E17_11965 PF03724 META domain D9E17_11970 PF03891 Domain of unknown function (DUF333) D9E17_11975 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D9E17_11975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_11975 PF10371 Domain of unknown function D9E17_11975 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D9E17_11975 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase D9E17_11980 PF00267 Gram-negative porin D9E17_11985 PF00582 Universal stress protein family D9E17_11990 PF01171 PP-loop family D9E17_11995 PF03880 DbpA RNA binding domain D9E17_11995 PF00271 Helicase conserved C-terminal domain D9E17_11995 PF00270 DEAD/DEAH box helicase D9E17_12000 PF01544 CorA-like Mg2+ transporter protein D9E17_12005 PF08448 PAS fold D9E17_12005 PF00990 Diguanylate cyclase, GGDEF domain D9E17_12010 PF01713 Smr domain D9E17_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_12015 PF03466 LysR substrate binding domain D9E17_12020 PF01546 Peptidase family M20/M25/M40 D9E17_12020 PF07687 Peptidase dimerisation domain D9E17_12025 PF01546 Peptidase family M20/M25/M40 D9E17_12030 PF03806 AbgT putative transporter family D9E17_12035 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D9E17_12035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D9E17_12040 PF00325 Bacterial regulatory proteins, crp family D9E17_12040 PF00027 Cyclic nucleotide-binding domain D9E17_12045 PF00582 Universal stress protein family D9E17_12050 PF10749 Protein of unknown function (DUF2534) D9E17_12055 PF00924 Mechanosensitive ion channel D9E17_12060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_12065 PF03466 LysR substrate binding domain D9E17_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_12070 PF12146 Serine aminopeptidase, S33 D9E17_12085 PF00246 Zinc carboxypeptidase D9E17_12090 PF13378 Enolase C-terminal domain-like D9E17_12090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D9E17_12095 PF08534 Redoxin D9E17_12100 PF18024 Helix-turn-helix domain D9E17_12100 PF13188 PAS domain D9E17_12100 PF00158 Sigma-54 interaction domain D9E17_12105 PF05128 Domain of unknown function (DUF697) D9E17_12110 PF04317 YcjX-like family, DUF463 D9E17_12115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9E17_12115 PF00356 Bacterial regulatory proteins, lacI family D9E17_12120 PF09381 Outer membrane protein G (OmpG) D9E17_12125 PF17912 MalK OB fold domain D9E17_12125 PF00005 ABC transporter D9E17_12125 PF03459 TOBE domain D9E17_12130 PF13419 Haloacid dehalogenase-like hydrolase D9E17_12135 PF03636 Glycosyl hydrolase family 65, N-terminal domain D9E17_12135 PF03632 Glycosyl hydrolase family 65 central catalytic domain D9E17_12135 PF03633 Glycosyl hydrolase family 65, C-terminal domain D9E17_12140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9E17_12140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D9E17_12150 PF00107 Zinc-binding dehydrogenase D9E17_12155 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_12160 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_12165 PF01547 Bacterial extracellular solute-binding protein D9E17_12170 PF00128 Alpha amylase, catalytic domain D9E17_12175 PF00581 Rhodanese-like domain D9E17_12180 PF09584 Phage shock protein PspD (Phageshock_PspD) D9E17_12185 PF04024 PspC domain D9E17_12190 PF06667 Phage shock protein B D9E17_12195 PF04012 PspA/IM30 family D9E17_12200 PF02954 Bacterial regulatory protein, Fis family D9E17_12200 PF00158 Sigma-54 interaction domain D9E17_12205 PF00202 Aminotransferase class-III D9E17_12210 PF01266 FAD dependent oxidoreductase D9E17_12215 PF00171 Aldehyde dehydrogenase family D9E17_12220 PF07883 Cupin domain D9E17_12220 PF01381 Helix-turn-helix D9E17_12225 PF07722 Peptidase C26 D9E17_12230 PF00120 Glutamine synthetase, catalytic domain D9E17_12240 PF00324 Amino acid permease D9E17_12245 PF10820 Protein of unknown function (DUF2543) D9E17_12250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_12255 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_12260 PF12911 N-terminal TM domain of oligopeptide transport permease C D9E17_12260 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_12265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_12265 PF00005 ABC transporter D9E17_12270 PF00005 ABC transporter D9E17_12275 PF04480 Protein of unknown function (DUF559) D9E17_12290 PF00575 S1 RNA binding domain D9E17_12290 PF08206 Ribonuclease B OB domain D9E17_12290 PF17876 Cold shock domain D9E17_12290 PF00773 RNB domain D9E17_12300 PF13426 PAS domain D9E17_12300 PF00563 EAL domain D9E17_12300 PF00990 Diguanylate cyclase, GGDEF domain D9E17_12310 PF00455 DeoR C terminal sensor domain D9E17_12310 PF08220 DeoR-like helix-turn-helix domain D9E17_12315 PF05433 Glycine zipper 2TM domain D9E17_12320 PF01253 Translation initiation factor SUI1 D9E17_12325 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D9E17_12330 PF18073 Rubredoxin metal binding domain D9E17_12335 PF06305 Lipopolysaccharide assembly protein A domain D9E17_12340 PF01569 PAP2 superfamily D9E17_12345 PF00925 GTP cyclohydrolase II D9E17_12350 PF00330 Aconitase family (aconitate hydratase) D9E17_12350 PF00694 Aconitase C-terminal domain D9E17_12375 PF03466 LysR substrate binding domain D9E17_12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_12380 PF08272 Topoisomerase I zinc-ribbon-like D9E17_12380 PF01751 Toprim domain D9E17_12380 PF01396 Topoisomerase DNA binding C4 zinc finger D9E17_12380 PF01131 DNA topoisomerase D9E17_12385 PF10692 Protein of unknown function (DUF2498) D9E17_12390 PF08496 Peptidase family S49 N-terminal D9E17_12390 PF01343 Peptidase family S49 D9E17_12395 PF00106 short chain dehydrogenase D9E17_12400 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D9E17_12400 PF12557 Cob(I)alamin adenosyltransferase N terminal D9E17_12405 PF00849 RNA pseudouridylate synthase D9E17_12405 PF01479 S4 domain D9E17_12415 PF01300 Telomere recombination D9E17_12420 PF02811 PHP domain D9E17_12425 PF08255 Trp-operon Leader Peptide D9E17_12430 PF04715 Anthranilate synthase component I, N terminal region D9E17_12430 PF00425 chorismate binding enzyme D9E17_12435 PF00591 Glycosyl transferase family, a/b domain D9E17_12435 PF02885 Glycosyl transferase family, helical bundle domain D9E17_12435 PF00117 Glutamine amidotransferase class-I D9E17_12440 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D9E17_12440 PF00218 Indole-3-glycerol phosphate synthase D9E17_12445 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_12450 PF00290 Tryptophan synthase alpha chain D9E17_12455 PF10685 Stress-induced bacterial acidophilic repeat motif D9E17_12460 PF05974 Domain of unknown function (DUF892) D9E17_12465 PF05974 Domain of unknown function (DUF892) D9E17_12470 PF03922 OmpW family D9E17_12485 PF04279 Intracellular septation protein A D9E17_12490 PF03061 Thioesterase superfamily D9E17_12495 PF03544 Gram-negative bacterial TonB protein C-terminal D9E17_12500 PF03795 YCII-related domain D9E17_12505 PF07885 Ion channel D9E17_12505 PF02254 TrkA-N domain D9E17_12515 PF13396 Phospholipase_D-nuclease N-terminal D9E17_12515 PF13091 PLD-like domain D9E17_12520 PF04269 Protein of unknown function, DUF440 D9E17_12525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_12525 PF00005 ABC transporter D9E17_12530 PF00005 ABC transporter D9E17_12530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_12535 PF12911 N-terminal TM domain of oligopeptide transport permease C D9E17_12535 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_12540 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_12545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_12550 PF01914 MarC family integral membrane protein D9E17_12555 PF00465 Iron-containing alcohol dehydrogenase D9E17_12555 PF00171 Aldehyde dehydrogenase family D9E17_12560 PF00265 Thymidine kinase D9E17_12565 PF00816 H-NS histone family D9E17_12570 PF00483 Nucleotidyl transferase D9E17_12575 PF00072 Response regulator receiver domain D9E17_12580 PF01734 Patatin-like phospholipase D9E17_12585 PF02810 SEC-C motif D9E17_12590 PF01842 ACT domain D9E17_12590 PF00551 Formyl transferase D9E17_12625 PF02665 Nitrate reductase gamma subunit D9E17_12630 PF02613 Nitrate reductase delta subunit D9E17_12635 PF14711 Respiratory nitrate reductase beta C-terminal D9E17_12635 PF13247 4Fe-4S dicluster domain D9E17_12640 PF00384 Molybdopterin oxidoreductase D9E17_12640 PF01568 Molydopterin dinucleotide binding domain D9E17_12640 PF14710 Respiratory nitrate reductase alpha N-terminal D9E17_12645 PF07690 Major Facilitator Superfamily D9E17_12650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_12650 PF00672 HAMP domain D9E17_12650 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D9E17_12650 PF07730 Histidine kinase D9E17_12655 PF00072 Response regulator receiver domain D9E17_12655 PF00196 Bacterial regulatory proteins, luxR family D9E17_12660 PF11924 Inverse autotransporter, beta-domain D9E17_12665 PF02635 DsrE/DsrF-like family D9E17_12670 PF04752 ChaC-like protein D9E17_12675 PF06150 ChaB D9E17_12680 PF01699 Sodium/calcium exchanger protein D9E17_12690 PF13940 Toxin Ldr, type I toxin-antitoxin system D9E17_12700 PF13940 Toxin Ldr, type I toxin-antitoxin system D9E17_12715 PF13940 Toxin Ldr, type I toxin-antitoxin system D9E17_12720 PF00793 DAHP synthetase I family D9E17_12725 PF13369 Transglutaminase-like superfamily D9E17_12730 PF04247 Invasion gene expression up-regulator, SirB D9E17_12735 PF17827 PrmC N-terminal domain D9E17_12735 PF13847 Methyltransferase domain D9E17_12740 PF00472 RF-1 domain D9E17_12740 PF03462 PCRF domain D9E17_12745 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D9E17_12745 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D9E17_12745 PF01488 Shikimate / quinate 5-dehydrogenase D9E17_12750 PF03550 Outer membrane lipoprotein LolB D9E17_12755 PF08544 GHMP kinases C terminal D9E17_12755 PF00288 GHMP kinases N terminal domain D9E17_12760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D9E17_12760 PF14572 Phosphoribosyl synthetase-associated domain D9E17_12765 PF00916 Sulfate permease family D9E17_12765 PF01740 STAS domain D9E17_12770 PF10762 Protein of unknown function (DUF2583) D9E17_12775 PF01195 Peptidyl-tRNA hydrolase D9E17_12780 PF06071 Protein of unknown function (DUF933) D9E17_12780 PF01926 50S ribosome-binding GTPase D9E17_12785 PF03212 Pertactin D9E17_12785 PF03797 Autotransporter beta-domain D9E17_12790 PF00158 Sigma-54 interaction domain D9E17_12790 PF02954 Bacterial regulatory protein, Fis family D9E17_12790 PF00989 PAS fold D9E17_12795 PF02733 Dak1 domain D9E17_12800 PF02734 DAK2 domain D9E17_12805 PF00381 PTS HPr component phosphorylation site D9E17_12805 PF00391 PEP-utilising enzyme, mobile domain D9E17_12805 PF03610 PTS system fructose IIA component D9E17_12805 PF05524 PEP-utilising enzyme, N-terminal D9E17_12810 PF01204 Trehalase D9E17_12820 PF04226 Transglycosylase associated protein D9E17_12825 PF07317 Flagellar regulator YcgR D9E17_12825 PF07238 PilZ domain D9E17_12830 PF01464 Transglycosylase SLT domain D9E17_12835 PF17676 LD-carboxypeptidase C-terminal domain D9E17_12835 PF02016 LD-carboxypeptidase N-terminal domain D9E17_12840 PF03471 Transporter associated domain D9E17_12840 PF00999 Sodium/hydrogen exchanger family D9E17_12840 PF02080 TrkA-C domain D9E17_12845 PF00842 Alanine racemase, C-terminal domain D9E17_12845 PF01168 Alanine racemase, N-terminal domain D9E17_12850 PF01266 FAD dependent oxidoreductase D9E17_12855 PF04293 SpoVR like protein D9E17_12860 PF00392 Bacterial regulatory proteins, gntR family D9E17_12860 PF07840 FadR C-terminal domain D9E17_12865 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D9E17_12870 PF02600 Disulfide bond formation protein DsbB D9E17_12875 PF13438 Domain of unknown function (DUF4113) D9E17_12875 PF11798 IMS family HHH motif D9E17_12875 PF11799 impB/mucB/samB family C-terminal domain D9E17_12875 PF00817 impB/mucB/samB family D9E17_12880 PF00717 Peptidase S24-like D9E17_12885 PF06109 Haemolysin E (HlyE) D9E17_12890 PF03692 Putative zinc- or iron-chelating domain D9E17_12895 PF01557 Fumarylacetoacetate (FAA) hydrolase family D9E17_12900 PF05166 YcgL domain D9E17_12905 PF04151 Bacterial pre-peptidase C-terminal domain D9E17_12910 PF05666 Fels-1 Prophage Protein-like D9E17_12915 PF03775 Septum formation inhibitor MinC, C-terminal domain D9E17_12915 PF05209 Septum formation inhibitor MinC, N-terminal domain D9E17_12920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D9E17_12925 PF03776 Septum formation topological specificity factor MinE D9E17_12950 PF13436 Glycine-zipper domain D9E17_12955 PF16456 YmgD protein D9E17_12970 PF00563 EAL domain D9E17_12970 PF12792 CSS motif domain associated with EAL D9E17_12980 PF10798 Biofilm development protein YmgB/AriR D9E17_12990 PF10798 Biofilm development protein YmgB/AriR D9E17_12995 PF04940 Sensors of blue-light using FAD D9E17_12995 PF00563 EAL domain D9E17_13000 PF13411 MerR HTH family regulatory protein D9E17_13005 PF07166 Protein of unknown function (DUF1398) D9E17_13020 PF00180 Isocitrate/isopropylmalate dehydrogenase D9E17_13025 PF00849 RNA pseudouridylate synthase D9E17_13030 PF00293 NUDIX domain D9E17_13040 PF04356 Protein of unknown function (DUF489) D9E17_13045 PF08328 Adenylosuccinate lyase C-terminal D9E17_13045 PF00206 Lyase D9E17_13050 PF00072 Response regulator receiver domain D9E17_13050 PF00486 Transcriptional regulatory protein, C terminal D9E17_13055 PF08918 PhoQ Sensor D9E17_13055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_13060 PF08007 Cupin superfamily protein D9E17_13065 PF07687 Peptidase dimerisation domain D9E17_13065 PF01546 Peptidase family M20/M25/M40 D9E17_13070 PF08402 TOBE domain D9E17_13070 PF00005 ABC transporter D9E17_13075 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_13080 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_13085 PF13416 Bacterial extracellular solute-binding protein D9E17_13090 PF12158 Protein of unknown function (DUF3592) D9E17_13095 PF04536 TPM domain D9E17_13100 PF02146 Sir2 family D9E17_13105 PF00480 ROK family D9E17_13110 PF02687 FtsX-like permease family D9E17_13110 PF12704 MacB-like periplasmic core domain D9E17_13115 PF00005 ABC transporter D9E17_13120 PF12704 MacB-like periplasmic core domain D9E17_13120 PF02687 FtsX-like permease family D9E17_13130 PF00270 DEAD/DEAH box helicase D9E17_13130 PF03461 TRCF domain D9E17_13130 PF02559 CarD-like/TRCF domain D9E17_13130 PF17757 UvrB interaction domain D9E17_13130 PF00271 Helicase conserved C-terminal domain D9E17_13135 PF03734 L,D-transpeptidase catalytic domain D9E17_13135 PF01476 LysM domain D9E17_13135 PF17969 L,D-transpeptidase C-terminal domain D9E17_13140 PF07338 Protein of unknown function (DUF1471) D9E17_13145 PF00440 Bacterial regulatory proteins, tetR family D9E17_13150 PF05433 Glycine zipper 2TM domain D9E17_13155 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_13160 PF05728 Uncharacterised protein family (UPF0227) D9E17_13165 PF00933 Glycosyl hydrolase family 3 N terminal domain D9E17_13170 PF01636 Phosphotransferase enzyme family D9E17_13175 PF13036 Peptidoglycan-synthase activator LpoB D9E17_13180 PF07233 Protein of unknown function (DUF1425) D9E17_13185 PF01230 HIT domain D9E17_13190 PF07715 TonB-dependent Receptor Plug Domain D9E17_13190 PF00593 TonB dependent receptor D9E17_13195 PF00367 phosphotransferase system, EIIB D9E17_13195 PF02378 Phosphotransferase system, EIIC D9E17_13200 PF01026 TatD related DNase D9E17_13205 PF09115 DNA polymerase III, delta subunit, C terminal D9E17_13210 PF02223 Thymidylate kinase D9E17_13215 PF02618 YceG-like family D9E17_13220 PF01063 Amino-transferase class IV D9E17_13225 PF00109 Beta-ketoacyl synthase, N-terminal domain D9E17_13225 PF02801 Beta-ketoacyl synthase, C-terminal domain D9E17_13230 PF00550 Phosphopantetheine attachment site D9E17_13240 PF00698 Acyl transferase domain D9E17_13245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D9E17_13245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D9E17_13250 PF02504 Fatty acid synthesis protein D9E17_13255 PF01783 Ribosomal L32p protein family D9E17_13260 PF02620 Large ribosomal RNA subunit accumulation protein YceD D9E17_13265 PF02545 Maf-like protein D9E17_13270 PF00849 RNA pseudouridylate synthase D9E17_13270 PF01479 S4 domain D9E17_13275 PF10150 Ribonuclease E/G family D9E17_13275 PF00575 S1 RNA binding domain D9E17_13275 PF12111 Polyribonucleotide phosphorylase C terminal D9E17_13280 PF00669 Bacterial flagellin N-terminal helical region D9E17_13285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_13285 PF00460 Flagella basal body rod protein D9E17_13290 PF10135 Rod binding protein D9E17_13290 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9E17_13295 PF02119 Flagellar P-ring protein D9E17_13300 PF02107 Flagellar L-ring protein D9E17_13305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_13305 PF00460 Flagella basal body rod protein D9E17_13310 PF00460 Flagella basal body rod protein D9E17_13310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_13315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_13315 PF00460 Flagella basal body rod protein D9E17_13315 PF07559 Flagellar basal body protein FlaE D9E17_13320 PF13860 FlgD Ig-like domain D9E17_13320 PF03963 Flagellar hook capping protein - N-terminal region D9E17_13320 PF13861 FlgD Tudor-like domain D9E17_13325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_13325 PF00460 Flagella basal body rod protein D9E17_13330 PF00460 Flagella basal body rod protein D9E17_13335 PF13144 Chaperone for flagella basal body P-ring formation D9E17_13340 PF04316 Anti-sigma-28 factor, FlgM D9E17_13345 PF05130 FlgN protein D9E17_13350 PF03023 Lipid II flippase MurJ D9E17_13355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D9E17_13360 PF04337 Protein of unknown function, DUF480 D9E17_13365 PF13302 Acetyltransferase (GNAT) domain D9E17_13370 PF07690 Major Facilitator Superfamily D9E17_13375 PF13417 Glutathione S-transferase, N-terminal domain D9E17_13375 PF04399 Glutaredoxin 2, C terminal domain D9E17_13380 PF07273 Protein of unknown function (DUF1439) D9E17_13385 PF01979 Amidohydrolase family D9E17_13390 PF06183 DinI-like family D9E17_13395 PF13991 BssS protein family D9E17_13400 PF01266 FAD dependent oxidoreductase D9E17_13405 PF10968 Protein of unknown function (DUF2770) D9E17_13410 PF01292 Prokaryotic cytochrome b561 D9E17_13415 PF04264 YceI-like domain D9E17_13425 PF03279 Bacterial lipid A biosynthesis acyltransferase D9E17_13430 PF07690 Major Facilitator Superfamily D9E17_13435 PF13984 MsyB protein D9E17_13440 PF07119 Protein of unknown function (DUF1375) D9E17_13445 PF00535 Glycosyl transferase family 2 D9E17_13450 PF04349 Periplasmic glucan biosynthesis protein, MdoG D9E17_13455 PF01757 Acyltransferase family D9E17_13460 PF13091 PLD-like domain D9E17_13465 PF01661 Macro domain D9E17_13475 PF10610 Thin aggregative fimbriae synthesis protein D9E17_13480 PF07012 Curlin associated repeat D9E17_13485 PF07012 Curlin associated repeat D9E17_13495 PF00196 Bacterial regulatory proteins, luxR family D9E17_13500 PF10627 Curli assembly protein CsgE D9E17_13505 PF10614 Type VIII secretion system (T8SS), CsgF protein D9E17_13510 PF03783 Curli production assembly/transport component CsgG D9E17_13515 PF06496 Protein of unknown function (DUF1097) D9E17_13520 PF02613 Nitrate reductase delta subunit D9E17_13525 PF02811 PHP domain D9E17_13530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D9E17_13570 PF17158 Membrane-associated sensor, integral membrane domain D9E17_13570 PF00990 Diguanylate cyclase, GGDEF domain D9E17_13580 PF01522 Polysaccharide deacetylase D9E17_13580 PF14883 Hypothetical glycosyl hydrolase family 13 D9E17_13585 PF00535 Glycosyl transferase family 2 D9E17_13590 PF13994 PgaD-like protein D9E17_13595 PF02562 PhoH-like protein D9E17_13600 PF04261 Dyp-type peroxidase family D9E17_13605 PF13473 Cupredoxin-like domain D9E17_13605 PF09375 Imelysin D9E17_13610 PF03239 Iron permease FTR1 family D9E17_13615 PF00474 Sodium:solute symporter family D9E17_13625 PF01619 Proline dehydrogenase D9E17_13625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D9E17_13625 PF00171 Aldehyde dehydrogenase family D9E17_13625 PF14850 DNA-binding domain of Proline dehydrogenase D9E17_13630 PF08362 YcdC-like protein, C-terminal region D9E17_13630 PF00440 Bacterial regulatory proteins, tetR family D9E17_13640 PF00296 Luciferase-like monooxygenase D9E17_13645 PF00857 Isochorismatase family D9E17_13650 PF01042 Endoribonuclease L-PSP D9E17_13655 PF12697 Alpha/beta hydrolase family D9E17_13660 PF00881 Nitroreductase family D9E17_13665 PF01613 Flavin reductase like domain D9E17_13670 PF00860 Permease family D9E17_13675 PF10685 Stress-induced bacterial acidophilic repeat motif D9E17_13680 PF03358 NADPH-dependent FMN reductase D9E17_13685 PF13993 YccJ-like protein D9E17_13690 PF00328 Histidine phosphatase superfamily (branch 2) D9E17_13700 PF00226 DnaJ domain D9E17_13700 PF01556 DnaJ C terminal domain D9E17_13710 PF02613 Nitrate reductase delta subunit D9E17_13715 PF00384 Molybdopterin oxidoreductase D9E17_13715 PF01568 Molydopterin dinucleotide binding domain D9E17_13715 PF18364 Molybdopterin oxidoreductase N-terminal domain D9E17_13720 PF03264 NapC/NirT cytochrome c family, N-terminal region D9E17_13725 PF00072 Response regulator receiver domain D9E17_13725 PF00486 Transcriptional regulatory protein, C terminal D9E17_13730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9E17_13735 PF00072 Response regulator receiver domain D9E17_13735 PF00512 His Kinase A (phospho-acceptor) domain D9E17_13735 PF01627 Hpt domain D9E17_13735 PF00672 HAMP domain D9E17_13735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_13740 PF12801 4Fe-4S binding domain D9E17_13745 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system D9E17_13750 PF15939 Putative antitoxin of bacterial toxin-antitoxin system D9E17_13760 PF00313 'Cold-shock' DNA-binding domain D9E17_13765 PF00313 'Cold-shock' DNA-binding domain D9E17_13780 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF D9E17_13785 PF06251 Capsule biosynthesis GfcC D9E17_13790 PF06082 Exopolysaccharide biosynthesis protein YbjH D9E17_13795 PF10531 SLBB domain D9E17_13795 PF02563 Polysaccharide biosynthesis/export protein D9E17_13795 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D9E17_13800 PF01451 Low molecular weight phosphotyrosine protein phosphatase D9E17_13805 PF13807 G-rich domain on putative tyrosine kinase D9E17_13805 PF02706 Chain length determinant protein D9E17_13805 PF13614 AAA domain D9E17_13810 PF00328 Histidine phosphatase superfamily (branch 2) D9E17_13815 PF08173 Membrane bound YbgT-like protein D9E17_13820 PF02322 Cytochrome bd terminal oxidase subunit II D9E17_13825 PF01654 Cytochrome bd terminal oxidase subunit I D9E17_13830 PF04809 HupH hydrogenase expression protein, C-terminal conserved region D9E17_13835 PF07449 Hydrogenase-1 expression protein HyaE D9E17_13840 PF01750 Hydrogenase maturation protease D9E17_13845 PF01292 Prokaryotic cytochrome b561 D9E17_13850 PF00374 Nickel-dependent hydrogenase D9E17_13855 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D9E17_13855 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D9E17_13865 PF01027 Inhibitor of apoptosis-promoting Bax1 D9E17_13870 PF04358 DsrC like protein D9E17_13875 PF00708 Acylphosphatase D9E17_13880 PF17785 PUA-like domain D9E17_13880 PF10672 S-adenosylmethionine-dependent methyltransferase D9E17_13885 PF08755 Hemimethylated DNA-binding protein YccV like D9E17_13890 PF13380 CoA binding domain D9E17_13895 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D9E17_13900 PF02142 MGS-like domain D9E17_13905 PF12462 DNA helicase IV / RNA helicase N terminal D9E17_13905 PF00580 UvrD/REP helicase N-terminal domain D9E17_13905 PF13361 UvrD-like helicase C-terminal domain D9E17_13910 PF03733 Inner membrane component domain D9E17_13915 PF12805 FUSC-like inner membrane protein yccS D9E17_13920 PF04994 TfoX C-terminal domain D9E17_13920 PF04993 TfoX N-terminal domain D9E17_13925 PF03846 Cell division inhibitor SulA D9E17_13930 PF00691 OmpA family D9E17_13930 PF01389 OmpA-like transmembrane domain D9E17_13935 PF17414 MatP C-terminal ribbon-helix-helix domain D9E17_13935 PF06303 MatP N-terminal domain D9E17_13940 PF05362 Lon protease (S16) C-terminal proteolytic domain D9E17_13940 PF13654 AAA domain D9E17_13945 PF07977 FabA-like domain D9E17_13950 PF04957 Ribosome modulation factor D9E17_13955 PF03886 ABC-type transport auxiliary lipoprotein component D9E17_13960 PF02470 MlaD protein D9E17_13965 PF04403 Paraquat-inducible protein A D9E17_13970 PF16326 ABC transporter C-terminal domain D9E17_13970 PF00005 ABC transporter D9E17_13970 PF12848 ABC transporter D9E17_13975 PF10672 S-adenosylmethionine-dependent methyltransferase D9E17_13975 PF01170 Putative RNA methylase family UPF0020 D9E17_13975 PF02926 THUMP domain D9E17_13980 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_13980 PF03473 MOSC domain D9E17_13980 PF03476 MOSC N-terminal beta barrel domain D9E17_13985 PF07126 Cell-division protein ZapC D9E17_13990 PF01180 Dihydroorotate dehydrogenase D9E17_13995 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_13995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_14000 PF00419 Fimbrial protein D9E17_14005 PF00419 Fimbrial protein D9E17_14010 PF00419 Fimbrial protein D9E17_14015 PF13954 PapC N-terminal domain D9E17_14015 PF13953 PapC C-terminal domain D9E17_14015 PF00577 Outer membrane usher protein D9E17_14020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_14020 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_14025 PF00419 Fimbrial protein D9E17_14030 PF03358 NADPH-dependent FMN reductase D9E17_14035 PF09084 NMT1/THI5 like D9E17_14040 PF00296 Luciferase-like monooxygenase D9E17_14045 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14050 PF00005 ABC transporter D9E17_14055 PF01433 Peptidase family M1 domain D9E17_14055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D9E17_14055 PF11940 Domain of unknown function (DUF3458) Ig-like fold D9E17_14060 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D9E17_14060 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D9E17_14065 PF01336 OB-fold nucleic acid binding domain D9E17_14065 PF00152 tRNA synthetases class II (D, K and N) D9E17_14070 PF00267 Gram-negative porin D9E17_14075 PF00155 Aminotransferase class I and II D9E17_14080 PF00753 Metallo-beta-lactamase superfamily D9E17_14085 PF05951 Bacterial protein of unknown function (DUF882) D9E17_14090 PF01471 Putative peptidoglycan binding domain D9E17_14090 PF03734 L,D-transpeptidase catalytic domain D9E17_14095 PF16330 MukB hinge domain D9E17_14095 PF04310 MukB N-terminal D9E17_14100 PF04288 MukE-like family D9E17_14105 PF03882 MukF winged-helix domain D9E17_14105 PF17193 MukF C-terminal domain D9E17_14105 PF17192 MukF middle domain D9E17_14110 PF13847 Methyltransferase domain D9E17_14115 PF02698 DUF218 domain D9E17_14120 PF01636 Phosphotransferase enzyme family D9E17_14125 PF02348 Cytidylyltransferase D9E17_14130 PF03966 Trm112p-like protein D9E17_14135 PF06224 Winged helix DNA-binding domain D9E17_14140 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D9E17_14145 PF00664 ABC transporter transmembrane region D9E17_14145 PF00005 ABC transporter D9E17_14150 PF03772 Competence protein D9E17_14150 PF00753 Metallo-beta-lactamase superfamily D9E17_14155 PF00216 Bacterial DNA-binding protein D9E17_14160 PF00575 S1 RNA binding domain D9E17_14165 PF02224 Cytidylate kinase D9E17_14170 PF01435 Peptidase family M48 D9E17_14175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D9E17_14180 PF00266 Aminotransferase class-V D9E17_14185 PF04239 Protein of unknown function (DUF421) D9E17_14190 PF18381 YcaO cyclodehydratase C-terminal domain D9E17_14190 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D9E17_14195 PF01226 Formate/nitrite transporter D9E17_14200 PF02901 Pyruvate formate lyase-like D9E17_14200 PF01228 Glycine radical D9E17_14205 PF04055 Radical SAM superfamily D9E17_14210 PF02525 Flavodoxin-like fold D9E17_14215 PF03466 LysR substrate binding domain D9E17_14215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_14220 PF13520 Amino acid permease D9E17_14225 PF07690 Major Facilitator Superfamily D9E17_14230 PF00857 Isochorismatase family D9E17_14235 PF04976 DMSO reductase anchor subunit (DmsC) D9E17_14240 PF13247 4Fe-4S dicluster domain D9E17_14240 PF12800 4Fe-4S binding domain D9E17_14245 PF01568 Molydopterin dinucleotide binding domain D9E17_14245 PF00384 Molybdopterin oxidoreductase D9E17_14245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D9E17_14250 PF02403 Seryl-tRNA synthetase N-terminal domain D9E17_14250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9E17_14255 PF16193 AAA C-terminal domain D9E17_14255 PF12002 MgsA AAA+ ATPase C terminal D9E17_14255 PF00004 ATPase family associated with various cellular activities (AAA) D9E17_14260 PF03548 Outer membrane lipoprotein carrier protein LolA D9E17_14265 PF09397 Ftsk gamma domain D9E17_14265 PF01580 FtsK/SpoIIIE family D9E17_14265 PF17854 FtsK alpha domain D9E17_14265 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D9E17_14270 PF01037 Lrp/AsnC ligand binding domain D9E17_14275 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_14280 PF00664 ABC transporter transmembrane region D9E17_14280 PF00005 ABC transporter D9E17_14285 PF00005 ABC transporter D9E17_14285 PF00664 ABC transporter transmembrane region D9E17_14290 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D9E17_14295 PF01176 Translation initiation factor 1A / IF-1 D9E17_14310 PF17871 AAA lid domain D9E17_14310 PF10431 C-terminal, D2-small domain, of ClpB protein D9E17_14310 PF07724 AAA domain (Cdc48 subfamily) D9E17_14310 PF00004 ATPase family associated with various cellular activities (AAA) D9E17_14310 PF02861 Clp amino terminal domain, pathogenicity island component D9E17_14315 PF02617 ATP-dependent Clp protease adaptor protein ClpS D9E17_14320 PF00313 'Cold-shock' DNA-binding domain D9E17_14325 PF00005 ABC transporter D9E17_14325 PF02687 FtsX-like permease family D9E17_14325 PF12704 MacB-like periplasmic core domain D9E17_14330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_14335 PF04393 Protein of unknown function (DUF535) D9E17_14340 PF11398 Protein of unknown function (DUF2813) D9E17_14355 PF03956 Lysine exporter LysO D9E17_14360 PF03063 Prismane/CO dehydrogenase family D9E17_14365 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_14365 PF00970 Oxidoreductase FAD-binding domain D9E17_14365 PF00175 Oxidoreductase NAD-binding domain D9E17_14370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9E17_14370 PF00205 Thiamine pyrophosphate enzyme, central domain D9E17_14370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_14375 PF01212 Beta-eliminating lyase D9E17_14380 PF13460 NAD(P)H-binding D9E17_14380 PF11066 Protein of unknown function (DUF2867) D9E17_14385 PF01370 NAD dependent epimerase/dehydratase family D9E17_14390 PF01510 N-acetylmuramoyl-L-alanine amidase D9E17_14395 PF01906 Putative heavy-metal-binding D9E17_14400 PF12883 Protein of unknown function (DUF3828) D9E17_14405 PF00005 ABC transporter D9E17_14410 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_14415 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14420 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14425 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_14430 PF05958 tRNA (Uracil-5-)-methyltransferase D9E17_14435 PF10767 Protein of unknown function (DUF2593) D9E17_14440 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14445 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14450 PF08402 TOBE domain D9E17_14450 PF00005 ABC transporter D9E17_14455 PF13416 Bacterial extracellular solute-binding protein D9E17_14460 PF10722 Putative bacterial sensory transduction regulator D9E17_14465 PF08443 RimK-like ATP-grasp domain D9E17_14465 PF18030 RimK PreATP-grasp domain D9E17_14470 PF00881 Nitroreductase family D9E17_14475 PF07214 Protein of unknown function (DUF1418) D9E17_14480 PF00462 Glutaredoxin D9E17_14485 PF11045 Putative inner membrane protein of Enterobacteriaceae D9E17_14490 PF02080 TrkA-C domain D9E17_14490 PF06826 Predicted Permease Membrane Region D9E17_14495 PF04606 Ogr/Delta-like zinc finger D9E17_14500 PF02086 D12 class N6 adenine-specific DNA methyltransferase D9E17_14505 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9E17_14515 PF17282 Family of unknown function (DUF5347) D9E17_14525 PF06892 Phage regulatory protein CII (CP76) D9E17_14535 PF07022 Bacteriophage CI repressor helix-turn-helix domain D9E17_14535 PF16452 Bacteriophage CI repressor C-terminal domain D9E17_14545 PF00589 Phage integrase family D9E17_14545 PF02899 Phage integrase, N-terminal SAM-like domain D9E17_14555 PF00440 Bacterial regulatory proteins, tetR family D9E17_14560 PF07690 Major Facilitator Superfamily D9E17_14575 PF07690 Major Facilitator Superfamily D9E17_14580 PF01569 PAP2 superfamily D9E17_14585 PF08220 DeoR-like helix-turn-helix domain D9E17_14585 PF00455 DeoR C terminal sensor domain D9E17_14590 PF00768 D-alanyl-D-alanine carboxypeptidase D9E17_14590 PF07943 Penicillin-binding protein 5, C-terminal domain D9E17_14595 PF13417 Glutathione S-transferase, N-terminal domain D9E17_14595 PF00043 Glutathione S-transferase, C-terminal domain D9E17_14605 PF10799 Biofilm formation protein (YliH/bssR) D9E17_14610 PF00919 Uncharacterized protein family UPF0004 D9E17_14610 PF18693 TRAM domain D9E17_14610 PF04055 Radical SAM superfamily D9E17_14615 PF17156 Gammaproteobacterial periplasmic sensor domain D9E17_14615 PF00990 Diguanylate cyclase, GGDEF domain D9E17_14620 PF00563 EAL domain D9E17_14620 PF17153 Periplasmic sensor domain, extracellular D9E17_14625 PF12911 N-terminal TM domain of oligopeptide transport permease C D9E17_14625 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14630 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_14640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D9E17_14640 PF00005 ABC transporter D9E17_14645 PF01112 Asparaginase D9E17_14650 PF00994 Probable molybdopterin binding domain D9E17_14650 PF03453 MoeA N-terminal region (domain I and II) D9E17_14650 PF03454 MoeA C-terminal region (domain IV) D9E17_14655 PF00899 ThiF family D9E17_14660 PF00923 Transaldolase/Fructose-6-phosphate aldolase D9E17_14665 PF04055 Radical SAM superfamily D9E17_14680 PF07350 Protein of unknown function (DUF1479) D9E17_14685 PF00005 ABC transporter D9E17_14685 PF12848 ABC transporter D9E17_14690 PF03734 L,D-transpeptidase catalytic domain D9E17_14690 PF17969 L,D-transpeptidase C-terminal domain D9E17_14695 PF03600 Citrate transporter D9E17_14700 PF02742 Iron dependent repressor, metal binding and dimerisation domain D9E17_14700 PF01325 Iron dependent repressor, N-terminal DNA binding domain D9E17_14710 PF00884 Sulfatase D9E17_14715 PF13505 Outer membrane protein beta-barrel domain D9E17_14725 PF00892 EamA-like transporter family D9E17_14730 PF00210 Ferritin-like domain D9E17_14735 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_14740 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14745 PF00005 ABC transporter D9E17_14750 PF00924 Mechanosensitive ion channel D9E17_14755 PF05971 RNA methyltransferase D9E17_14760 PF07338 Protein of unknown function (DUF1471) D9E17_14765 PF07715 TonB-dependent Receptor Plug Domain D9E17_14765 PF00593 TonB dependent receptor D9E17_14770 PF18331 PKHD-type hydroxylase C-terminal domain D9E17_14770 PF13640 2OG-Fe(II) oxygenase superfamily D9E17_14775 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9E17_14780 PF07338 Protein of unknown function (DUF1471) D9E17_14785 PF02615 Malate/L-lactate dehydrogenase D9E17_14790 PF02885 Glycosyl transferase family, helical bundle domain D9E17_14795 PF13307 Helicase C-terminal domain D9E17_14795 PF06733 DEAD_2 D9E17_14795 PF00270 DEAD/DEAH box helicase D9E17_14800 PF08719 Domain of unknown function (DUF1768) D9E17_14805 PF00270 DEAD/DEAH box helicase D9E17_14805 PF00271 Helicase conserved C-terminal domain D9E17_14810 PF09209 Tetracyclin repressor-like, C-terminal domain D9E17_14810 PF00440 Bacterial regulatory proteins, tetR family D9E17_14815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_14820 PF00005 ABC transporter D9E17_14835 PF11076 Putative inner membrane protein YbhQ D9E17_14840 PF03372 Endonuclease/Exonuclease/phosphatase family D9E17_14845 PF13091 PLD-like domain D9E17_14850 PF03706 Lysylphosphatidylglycerol synthase TM region D9E17_14855 PF01027 Inhibitor of apoptosis-promoting Bax1 D9E17_14860 PF01027 Inhibitor of apoptosis-promoting Bax1 D9E17_14865 PF02391 MoaE protein D9E17_14870 PF02597 ThiS family D9E17_14875 PF01967 MoaC family D9E17_14880 PF00994 Probable molybdopterin binding domain D9E17_14885 PF04055 Radical SAM superfamily D9E17_14885 PF06463 Molybdenum Cofactor Synthesis C D9E17_14890 PF01933 Uncharacterised protein family UPF0052 D9E17_14895 PF00271 Helicase conserved C-terminal domain D9E17_14895 PF02151 UvrB/uvrC motif D9E17_14895 PF12344 Ultra-violet resistance protein B D9E17_14895 PF17757 UvrB interaction domain D9E17_14895 PF04851 Type III restriction enzyme, res subunit D9E17_14905 PF08241 Methyltransferase domain D9E17_14910 PF00155 Aminotransferase class I and II D9E17_14915 PF06968 Biotin and Thiamin Synthesis associated domain D9E17_14915 PF04055 Radical SAM superfamily D9E17_14920 PF00202 Aminotransferase class-III D9E17_14925 PF01161 Phosphatidylethanolamine-binding protein D9E17_14930 PF01095 Pectinesterase D9E17_14935 PF00330 Aconitase family (aconitate hydratase) D9E17_14935 PF00694 Aconitase C-terminal domain D9E17_14940 PF00939 Sodium:sulfate symporter transmembrane region D9E17_14945 PF04303 PrpF protein D9E17_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_14950 PF03466 LysR substrate binding domain D9E17_14955 PF10282 Lactonase, 7-bladed beta-propeller D9E17_14965 PF00005 ABC transporter D9E17_14965 PF03459 TOBE domain D9E17_14970 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_14980 PF10766 Multidrug efflux pump-associated protein AcrZ D9E17_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_14985 PF03459 TOBE domain D9E17_14990 PF00005 ABC transporter D9E17_14995 PF16363 GDP-mannose 4,6 dehydratase D9E17_15000 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D9E17_15000 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D9E17_15005 PF08544 GHMP kinases C terminal D9E17_15005 PF00288 GHMP kinases N terminal domain D9E17_15005 PF10509 Galactokinase galactose-binding signature D9E17_15010 PF01263 Aldose 1-epimerase D9E17_15015 PF00300 Histidine phosphatase superfamily (branch 1) D9E17_15020 PF00793 DAHP synthetase I family D9E17_15025 PF13985 YbgS-like protein D9E17_15030 PF01545 Cation efflux family D9E17_15035 PF04973 Nicotinamide mononucleotide transporter D9E17_15040 PF02445 Quinolinate synthetase A protein D9E17_15080 PF13174 Tetratricopeptide repeat D9E17_15080 PF16331 TolA binding protein trimerisation D9E17_15085 PF00691 OmpA family D9E17_15090 PF04052 TolB amino-terminal domain D9E17_15090 PF07676 WD40-like Beta Propeller Repeat D9E17_15095 PF06519 TolA C-terminal D9E17_15100 PF02472 Biopolymer transport protein ExbD/TolR D9E17_15105 PF01618 MotA/TolQ/ExbB proton channel family D9E17_15110 PF03061 Thioesterase superfamily D9E17_15115 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) D9E17_15120 PF08173 Membrane bound YbgT-like protein D9E17_15125 PF02322 Cytochrome bd terminal oxidase subunit II D9E17_15130 PF01654 Cytochrome bd terminal oxidase subunit I D9E17_15140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_15140 PF02378 Phosphotransferase system, EIIC D9E17_15140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_15145 PF07702 UTRA domain D9E17_15145 PF00392 Bacterial regulatory proteins, gntR family D9E17_15150 PF00549 CoA-ligase D9E17_15150 PF02629 CoA binding domain D9E17_15155 PF00549 CoA-ligase D9E17_15155 PF08442 ATP-grasp domain D9E17_15160 PF00364 Biotin-requiring enzyme D9E17_15160 PF02817 e3 binding domain D9E17_15160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9E17_15165 PF02779 Transketolase, pyrimidine binding domain D9E17_15165 PF16078 2-oxoglutarate dehydrogenase N-terminus D9E17_15165 PF16870 2-oxoglutarate dehydrogenase C-terminal D9E17_15165 PF00676 Dehydrogenase E1 component D9E17_15170 PF13085 2Fe-2S iron-sulfur cluster binding domain D9E17_15175 PF02910 Fumarate reductase flavoprotein C-term D9E17_15175 PF00890 FAD binding domain D9E17_15180 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D9E17_15185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D9E17_15195 PF00285 Citrate synthase, C-terminal domain D9E17_15200 PF00419 Fimbrial protein D9E17_15205 PF13953 PapC C-terminal domain D9E17_15205 PF13954 PapC N-terminal domain D9E17_15205 PF00577 Outer membrane usher protein D9E17_15210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_15210 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_15220 PF05145 Transition state regulatory protein AbrB D9E17_15225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D9E17_15225 PF06827 Zinc finger found in FPG and IleRS D9E17_15225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D9E17_15230 PF03746 LamB/YcsF family D9E17_15235 PF02626 Carboxyltransferase domain, subdomain A and B D9E17_15240 PF02682 Carboxyltransferase domain, subdomain C and D D9E17_15245 PF01784 NIF3 (NGG1p interacting factor 3) D9E17_15250 PF00854 POT family D9E17_15255 PF03441 FAD binding domain of DNA photolyase D9E17_15255 PF00875 DNA photolyase D9E17_15260 PF08349 Protein of unknown function (DUF1722) D9E17_15295 PF10725 Protein of unknown function (DUF2517) D9E17_15300 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) D9E17_15305 PF03814 Potassium-transporting ATPase A subunit D9E17_15315 PF02669 K+-transporting ATPase, c chain D9E17_15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_15320 PF13492 GAF domain D9E17_15320 PF13493 Domain of unknown function (DUF4118) D9E17_15320 PF02702 Osmosensitive K+ channel His kinase sensor domain D9E17_15320 PF00512 His Kinase A (phospho-acceptor) domain D9E17_15325 PF00072 Response regulator receiver domain D9E17_15325 PF00486 Transcriptional regulatory protein, C terminal D9E17_15340 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D9E17_15340 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9E17_15340 PF01276 Orn/Lys/Arg decarboxylase, major domain D9E17_15345 PF13520 Amino acid permease D9E17_15355 PF10946 Protein of unknown function DUF2625 D9E17_15365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D9E17_15365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D9E17_15365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D9E17_15365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D9E17_15370 PF17206 SeqA protein N-terminal domain D9E17_15370 PF03925 SeqA protein C-terminal domain D9E17_15375 PF12697 Alpha/beta hydrolase family D9E17_15380 PF01402 Ribbon-helix-helix protein, copG family D9E17_15385 PF00258 Flavodoxin D9E17_15395 PF01475 Ferric uptake regulator family D9E17_15400 PF13982 YbfN-like lipoprotein D9E17_15405 PF03573 outer membrane porin, OprD family D9E17_15410 PF00749 tRNA synthetases class I (E and Q), catalytic domain D9E17_15410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D9E17_15415 PF00367 phosphotransferase system, EIIB D9E17_15415 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9E17_15415 PF02378 Phosphotransferase system, EIIC D9E17_15420 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D9E17_15425 PF01979 Amidohydrolase family D9E17_15430 PF01047 MarR family D9E17_15430 PF00480 ROK family D9E17_15435 PF13344 Haloacid dehalogenase-like hydrolase D9E17_15440 PF13537 Glutamine amidotransferase domain D9E17_15440 PF00733 Asparagine synthase D9E17_15480 PF01494 FAD binding domain D9E17_15485 PF04055 Radical SAM superfamily D9E17_15485 PF01938 TRAM domain D9E17_15485 PF00919 Uncharacterized protein family UPF0004 D9E17_15490 PF02562 PhoH-like protein D9E17_15495 PF02130 Uncharacterized protein family UPF0054 D9E17_15500 PF03471 Transporter associated domain D9E17_15500 PF00571 CBS domain D9E17_15505 PF00795 Carbon-nitrogen hydrolase D9E17_15515 PF01694 Rhomboid family D9E17_15520 PF00497 Bacterial extracellular solute-binding proteins, family 3 D9E17_15525 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_15530 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_15535 PF00005 ABC transporter D9E17_15540 PF01156 Inosine-uridine preferring nucleoside hydrolase D9E17_15545 PF00012 Hsp70 protein D9E17_15555 PF06889 Protein of unknown function (DUF1266) D9E17_15560 PF08238 Sel1 repeat D9E17_15570 PF06889 Protein of unknown function (DUF1266) D9E17_15575 PF08238 Sel1 repeat D9E17_15580 PF07295 Zinc-ribbon containing domain D9E17_15585 PF00133 tRNA synthetases class I (I, L, M and V) D9E17_15585 PF08264 Anticodon-binding domain of tRNA D9E17_15585 PF13603 Leucyl-tRNA synthetase, Domain 2 D9E17_15590 PF04390 Lipopolysaccharide-assembly D9E17_15595 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D9E17_15595 PF06144 DNA polymerase III, delta subunit D9E17_15600 PF01467 Cytidylyltransferase-like D9E17_15605 PF00300 Histidine phosphatase superfamily (branch 1) D9E17_15615 PF02590 Predicted SPOUT methyltransferase D9E17_15620 PF03717 Penicillin-binding Protein dimerisation domain D9E17_15620 PF00905 Penicillin binding protein transpeptidase domain D9E17_15625 PF01098 Cell cycle protein D9E17_15630 PF05036 Sporulation related domain D9E17_15630 PF03330 Lytic transglycolase D9E17_15635 PF07943 Penicillin-binding protein 5, C-terminal domain D9E17_15635 PF00768 D-alanyl-D-alanine carboxypeptidase D9E17_15640 PF04359 Protein of unknown function (DUF493) D9E17_15645 PF03099 Biotin/lipoate A/B protein ligase family D9E17_15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_15650 PF03466 LysR substrate binding domain D9E17_15655 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D9E17_15655 PF04055 Radical SAM superfamily D9E17_15660 PF02416 mttA/Hcf106 family D9E17_15665 PF00795 Carbon-nitrogen hydrolase D9E17_15670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D9E17_15675 PF00313 'Cold-shock' DNA-binding domain D9E17_15680 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP D9E17_15685 PF03606 C4-dicarboxylate anaerobic carrier D9E17_15690 PF12431 Transcriptional regulator D9E17_15690 PF00072 Response regulator receiver domain D9E17_15695 PF00989 PAS fold D9E17_15695 PF17203 Single cache domain 3 D9E17_15695 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9E17_15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_15700 PF08218 Citrate lyase ligase C-terminal domain D9E17_15705 PF06857 Malonate decarboxylase delta subunit (MdcD) D9E17_15710 PF03328 HpcH/HpaI aldolase/citrate lyase family D9E17_15715 PF04223 Citrate lyase, alpha subunit (CitF) D9E17_15720 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase D9E17_15725 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D9E17_15730 PF00939 Sodium:sulfate symporter transmembrane region D9E17_15735 PF00445 Ribonuclease T2 family D9E17_15740 PF14760 Rnk N-terminus D9E17_15740 PF01272 Transcription elongation factor, GreA/GreB, C-term D9E17_15745 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_15745 PF13823 Alcohol dehydrogenase GroES-associated D9E17_15745 PF00107 Zinc-binding dehydrogenase D9E17_15750 PF00582 Universal stress protein family D9E17_15755 PF13192 Thioredoxin domain D9E17_15755 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_15760 PF10417 C-terminal domain of 1-Cys peroxiredoxin D9E17_15760 PF00578 AhpC/TSA family D9E17_15765 PF13098 Thioredoxin-like domain D9E17_15770 PF03466 LysR substrate binding domain D9E17_15770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_15775 PF01507 Phosphoadenosine phosphosulfate reductase family D9E17_15775 PF11922 Domain of unknown function (DUF3440) D9E17_15780 PF02195 ParB-like nuclease domain D9E17_15785 PF00155 Aminotransferase class I and II D9E17_15790 PF00465 Iron-containing alcohol dehydrogenase D9E17_15795 PF04328 Selenoprotein, putative D9E17_15800 PF13722 5TM C-terminal transporter carbon starvation CstA D9E17_15800 PF02554 Carbon starvation protein CstA D9E17_15805 PF03061 Thioesterase superfamily D9E17_15815 PF00550 Phosphopantetheine attachment site D9E17_15815 PF00857 Isochorismatase family D9E17_15820 PF13193 AMP-binding enzyme C-terminal domain D9E17_15820 PF00501 AMP-binding enzyme D9E17_15825 PF00425 chorismate binding enzyme D9E17_15830 PF01497 Periplasmic binding protein D9E17_15835 PF05977 Transmembrane secretion effector D9E17_15840 PF01032 FecCD transport family D9E17_15845 PF01032 FecCD transport family D9E17_15850 PF00005 ABC transporter D9E17_15855 PF02706 Chain length determinant protein D9E17_15860 PF13193 AMP-binding enzyme C-terminal domain D9E17_15860 PF00550 Phosphopantetheine attachment site D9E17_15860 PF00975 Thioesterase domain D9E17_15860 PF00501 AMP-binding enzyme D9E17_15860 PF00668 Condensation domain D9E17_15865 PF03621 MbtH-like protein D9E17_15870 PF11806 Domain of unknown function (DUF3327) D9E17_15870 PF00756 Putative esterase D9E17_15875 PF07715 TonB-dependent Receptor Plug Domain D9E17_15875 PF00593 TonB dependent receptor D9E17_15880 PF17837 4'-phosphopantetheinyl transferase N-terminal domain D9E17_15880 PF01648 4'-phosphopantetheinyl transferase superfamily D9E17_15885 PF01609 Transposase DDE domain D9E17_15890 PF01848 Hok/gef family D9E17_15905 PF04107 Glutamate-cysteine ligase family 2(GCS2) D9E17_15910 PF06643 Protein of unknown function (DUF1158) D9E17_15915 PF04237 YjbR D9E17_15920 PF00881 Nitroreductase family D9E17_15925 PF00924 Mechanosensitive ion channel D9E17_15930 PF00324 Amino acid permease D9E17_15935 PF00873 AcrB/AcrD/AcrF family D9E17_15940 PF00529 HlyD membrane-fusion protein of T1SS D9E17_15940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_15945 PF11604 Copper binding periplasmic protein CusF D9E17_15950 PF02321 Outer membrane efflux protein D9E17_15955 PF00072 Response regulator receiver domain D9E17_15955 PF00486 Transcriptional regulatory protein, C terminal D9E17_15960 PF00672 HAMP domain D9E17_15960 PF00512 His Kinase A (phospho-acceptor) domain D9E17_15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_15965 PF04717 Type VI secretion system, phage-baseplate injector D9E17_15970 PF13632 Glycosyl transferase family group 2 D9E17_15970 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D9E17_15975 PF13283 Bacteriophage N adsorption protein A C-term D9E17_15980 PF14488 Domain of unknown function (DUF4434) D9E17_15985 PF12833 Helix-turn-helix domain D9E17_16010 PF00419 Fimbrial protein D9E17_16015 PF00419 Fimbrial protein D9E17_16020 PF13953 PapC C-terminal domain D9E17_16020 PF13954 PapC N-terminal domain D9E17_16020 PF00577 Outer membrane usher protein D9E17_16025 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_16025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_16030 PF00419 Fimbrial protein D9E17_16035 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D9E17_16035 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D9E17_16045 PF04307 LexA-binding, inner membrane-associated putative hydrolase D9E17_16050 PF01406 tRNA synthetases class I (C) catalytic domain D9E17_16050 PF09190 DALR domain D9E17_16055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D9E17_16060 PF12850 Calcineurin-like phosphoesterase superfamily domain D9E17_16065 PF00731 AIR carboxylase D9E17_16070 PF02222 ATP-grasp domain D9E17_16070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D9E17_16075 PF00696 Amino acid kinase family D9E17_16080 PF11392 Protein of unknown function (DUF2877) D9E17_16085 PF06545 Protein of unknown function (DUF1116) D9E17_16090 PF00549 CoA-ligase D9E17_16090 PF02629 CoA binding domain D9E17_16095 PF02615 Malate/L-lactate dehydrogenase D9E17_16100 PF01546 Peptidase family M20/M25/M40 D9E17_16105 PF05899 Protein of unknown function (DUF861) D9E17_16105 PF07883 Cupin domain D9E17_16110 PF02595 Glycerate kinase family D9E17_16115 PF00860 Permease family D9E17_16120 PF01979 Amidohydrolase family D9E17_16130 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D9E17_16135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9E17_16135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9E17_16140 PF01261 Xylose isomerase-like TIM barrel D9E17_16145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9E17_16145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_16145 PF00205 Thiamine pyrophosphate enzyme, central domain D9E17_16150 PF09339 IclR helix-turn-helix domain D9E17_16150 PF01614 Bacterial transcriptional regulator D9E17_16155 PF04115 Ureidoglycolate lyase D9E17_16160 PF03466 LysR substrate binding domain D9E17_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_16175 PF00005 ABC transporter D9E17_16180 PF13472 GDSL-like Lipase/Acylhydrolase family D9E17_16185 PF00106 short chain dehydrogenase D9E17_16190 PF00085 Thioredoxin D9E17_16195 PF03649 Uncharacterised protein family (UPF0014) D9E17_16200 PF00005 ABC transporter D9E17_16205 PF01145 SPFH domain / Band 7 family D9E17_16205 PF16200 C-terminal region of band_7 D9E17_16210 PF01957 NfeD-like C-terminal, partner-binding D9E17_16215 PF13411 MerR HTH family regulatory protein D9E17_16220 PF13520 Amino acid permease D9E17_16225 PF04960 Glutaminase D9E17_16230 PF00403 Heavy-metal-associated domain D9E17_16235 PF01381 Helix-turn-helix D9E17_16245 PF01963 TraB family D9E17_16250 PF04073 Aminoacyl-tRNA editing domain D9E17_16255 PF00149 Calcineurin-like phosphoesterase D9E17_16255 PF02872 5'-nucleotidase, C-terminal domain D9E17_16260 PF07690 Major Facilitator Superfamily D9E17_16265 PF00999 Sodium/hydrogen exchanger family D9E17_16265 PF02254 TrkA-N domain D9E17_16270 PF00294 pfkB family carbohydrate kinase D9E17_16275 PF07859 alpha/beta hydrolase fold D9E17_16280 PF00762 Ferrochelatase D9E17_16290 PF05191 Adenylate kinase, active site lid D9E17_16295 PF00183 Hsp90 protein D9E17_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_16300 PF02132 RecR protein D9E17_16300 PF13662 Toprim domain D9E17_16305 PF02575 YbaB/EbfC DNA-binding family D9E17_16310 PF12170 DNA polymerase III tau subunit V interacting with alpha D9E17_16310 PF12169 DNA polymerase III subunits gamma and tau domain III D9E17_16310 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D9E17_16315 PF00156 Phosphoribosyl transferase domain D9E17_16320 PF04304 Protein of unknown function (DUF454) D9E17_16325 PF07445 Primosomal replication protein priC D9E17_16330 PF10689 Protein of unknown function (DUF2496) D9E17_16335 PF00924 Mechanosensitive ion channel D9E17_16335 PF12795 Mechanosensitive ion channel porin domain D9E17_16335 PF12794 Mechanosensitive ion channel inner membrane domain 1 D9E17_16340 PF00440 Bacterial regulatory proteins, tetR family D9E17_16340 PF08361 MAATS-type transcriptional repressor, C-terminal region D9E17_16345 PF00529 HlyD membrane-fusion protein of T1SS D9E17_16345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_16350 PF00873 AcrB/AcrD/AcrF family D9E17_16355 PF10757 Biofilm formation regulator YbaJ D9E17_16360 PF05321 Haemolysin expression modulating protein D9E17_16365 PF12464 Maltose acetyltransferase D9E17_16365 PF14602 Hexapeptide repeat of succinyl-transferase D9E17_16370 PF10777 Inner membrane protein YlaC D9E17_16375 PF12792 CSS motif domain associated with EAL D9E17_16375 PF00563 EAL domain D9E17_16380 PF07237 Protein of unknown function (DUF1428) D9E17_16390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D9E17_16395 PF09619 Type III secretion system lipoprotein chaperone (YscW) D9E17_16405 PF00909 Ammonium Transporter Family D9E17_16410 PF00543 Nitrogen regulatory protein P-II D9E17_16415 PF00664 ABC transporter transmembrane region D9E17_16415 PF00005 ABC transporter D9E17_16420 PF00664 ABC transporter transmembrane region D9E17_16420 PF00005 ABC transporter D9E17_16425 PF01037 Lrp/AsnC ligand binding domain D9E17_16425 PF13404 AsnC-type helix-turn-helix domain D9E17_16435 PF12793 Sugar transport-related sRNA regulator N-term D9E17_16435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_16440 PF06508 Queuosine biosynthesis protein QueC D9E17_16455 PF13145 PPIC-type PPIASE domain D9E17_16460 PF00216 Bacterial DNA-binding protein D9E17_16465 PF05362 Lon protease (S16) C-terminal proteolytic domain D9E17_16465 PF00004 ATPase family associated with various cellular activities (AAA) D9E17_16465 PF02190 ATP-dependent protease La (LON) substrate-binding domain D9E17_16470 PF10431 C-terminal, D2-small domain, of ClpB protein D9E17_16470 PF07724 AAA domain (Cdc48 subfamily) D9E17_16470 PF06689 ClpX C4-type zinc finger D9E17_16475 PF00574 Clp protease D9E17_16480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D9E17_16480 PF05698 Bacterial trigger factor protein (TF) C-terminus D9E17_16480 PF05697 Bacterial trigger factor protein (TF) D9E17_16485 PF01722 BolA-like protein D9E17_16490 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D9E17_16490 PF03923 Uncharacterized lipoprotein D9E17_16495 PF07690 Major Facilitator Superfamily D9E17_16500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D9E17_16500 PF06481 COX Aromatic Rich Motif D9E17_16505 PF00115 Cytochrome C and Quinol oxidase polypeptide I D9E17_16510 PF00510 Cytochrome c oxidase subunit III D9E17_16515 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D9E17_16520 PF01040 UbiA prenyltransferase family D9E17_16525 PF07690 Major Facilitator Superfamily D9E17_16530 PF04461 Protein of unknown function (DUF520) D9E17_16535 PF08546 Ketopantoate reductase PanE/ApbA C terminal D9E17_16535 PF02558 Ketopantoate reductase PanE/ApbA D9E17_16540 PF01965 DJ-1/PfpI family D9E17_16545 PF02568 Thiamine biosynthesis protein (ThiI) D9E17_16545 PF02926 THUMP domain D9E17_16550 PF02609 Exonuclease VII small subunit D9E17_16555 PF00348 Polyprenyl synthetase D9E17_16560 PF02779 Transketolase, pyrimidine binding domain D9E17_16560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D9E17_16560 PF02780 Transketolase, C-terminal domain D9E17_16565 PF00248 Aldo/keto reductase family D9E17_16570 PF04608 Phosphatidylglycerophosphatase A D9E17_16575 PF02769 AIR synthase related protein, C-terminal domain D9E17_16575 PF00586 AIR synthase related protein, N-terminal domain D9E17_16580 PF01029 NusB family D9E17_16585 PF00885 6,7-dimethyl-8-ribityllumazine synthase D9E17_16590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D9E17_16590 PF01872 RibD C-terminal domain D9E17_16595 PF03477 ATP cone domain D9E17_16600 PF11622 Protein of unknown function (DUF3251) D9E17_16605 PF03502 Nucleoside-specific channel-forming protein, Tsx D9E17_16610 PF01844 HNH endonuclease D9E17_16615 PF02355 Protein export membrane protein D9E17_16615 PF07549 SecD/SecF GG Motif D9E17_16620 PF07549 SecD/SecF GG Motif D9E17_16620 PF13721 SecD export protein N-terminal TM region D9E17_16620 PF02355 Protein export membrane protein D9E17_16625 PF02699 Preprotein translocase subunit D9E17_16630 PF01702 Queuine tRNA-ribosyltransferase D9E17_16635 PF02547 Queuosine biosynthesis protein D9E17_16640 PF04336 Acyl carrier protein phosphodiesterase D9E17_16645 PF00128 Alpha amylase, catalytic domain D9E17_16645 PF02903 Alpha amylase, N-terminal ig-like domain D9E17_16650 PF00324 Amino acid permease D9E17_16655 PF05525 Branched-chain amino acid transport protein D9E17_16660 PF11808 Phosphate regulon sensor protein PhoR D9E17_16660 PF00989 PAS fold D9E17_16660 PF00512 His Kinase A (phospho-acceptor) domain D9E17_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_16665 PF00072 Response regulator receiver domain D9E17_16665 PF00486 Transcriptional regulatory protein, C terminal D9E17_16670 PF12320 Type 5 capsule protein repressor C-terminal domain D9E17_16670 PF00149 Calcineurin-like phosphoesterase D9E17_16675 PF13476 AAA domain D9E17_16680 PF07690 Major Facilitator Superfamily D9E17_16685 PF00480 ROK family D9E17_16690 PF04381 Putative exonuclease, RdgC D9E17_16705 PF06865 Pyrimidine/purine nucleoside phosphorylase D9E17_16710 PF07302 AroM protein D9E17_16715 PF16362 YaiA protein D9E17_16720 PF01202 Shikimate kinase D9E17_16725 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D9E17_16730 PF14748 Pyrroline-5-carboxylate reductase dimerisation D9E17_16730 PF03807 NADP oxidoreductase coenzyme F420-dependent D9E17_16735 PF00990 Diguanylate cyclase, GGDEF domain D9E17_16735 PF05230 MASE2 domain D9E17_16740 PF07769 psiF repeat D9E17_16745 PF00245 Alkaline phosphatase D9E17_16750 PF10796 Sigma-S stabilisation anti-adaptor protein D9E17_16755 PF01820 D-ala D-ala ligase N-terminus D9E17_16755 PF07478 D-ala D-ala ligase C-terminus D9E17_16760 PF10953 Protein of unknown function (DUF2754) D9E17_16765 PF10954 Protein of unknown function (DUF2755) D9E17_16770 PF07759 Protein of unknown function (DUF1615) D9E17_16775 PF05992 SbmA/BacA-like family D9E17_16780 PF00144 Beta-lactamase D9E17_16785 PF15977 Winged helix-turn-helix DNA binding D9E17_16790 PF03797 Autotransporter beta-domain D9E17_16790 PF03212 Pertactin D9E17_16795 PF00490 Delta-aminolevulinic acid dehydratase D9E17_16800 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D9E17_16805 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_16810 PF00005 ABC transporter D9E17_16815 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D9E17_16820 PF02585 GlcNAc-PI de-N-acetylase D9E17_16825 PF00535 Glycosyl transferase family 2 D9E17_16830 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_16840 PF02583 Metal-sensitive transcriptional repressor D9E17_16845 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_16845 PF00107 Zinc-binding dehydrogenase D9E17_16850 PF00756 Putative esterase D9E17_16855 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D9E17_16860 PF07690 Major Facilitator Superfamily D9E17_16865 PF00682 HMGL-like D9E17_16865 PF07836 DmpG-like communication domain D9E17_16870 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9E17_16870 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation D9E17_16875 PF01557 Fumarylacetoacetate (FAA) hydrolase family D9E17_16880 PF12697 Alpha/beta hydrolase family D9E17_16885 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D9E17_16890 PF01494 FAD binding domain D9E17_16895 PF01614 Bacterial transcriptional regulator D9E17_16895 PF09339 IclR helix-turn-helix domain D9E17_16900 PF00356 Bacterial regulatory proteins, lacI family D9E17_16905 PF16353 Domain of unknown function(DUF4981) D9E17_16905 PF02837 Glycosyl hydrolases family 2, sugar binding domain D9E17_16905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D9E17_16905 PF00703 Glycosyl hydrolases family 2 D9E17_16905 PF02929 Beta galactosidase small chain D9E17_16910 PF01306 LacY proton/sugar symporter D9E17_16915 PF12464 Maltose acetyltransferase D9E17_16915 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_16920 PF07690 Major Facilitator Superfamily D9E17_16925 PF02560 Cyanate lyase C-terminal domain D9E17_16930 PF00484 Carbonic anhydrase D9E17_16935 PF03466 LysR substrate binding domain D9E17_16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_16940 PF07969 Amidohydrolase family D9E17_16945 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D9E17_16950 PF16177 Acetyl-coenzyme A synthetase N-terminus D9E17_16950 PF00501 AMP-binding enzyme D9E17_16950 PF13193 AMP-binding enzyme C-terminal domain D9E17_16955 PF03972 MmgE/PrpD family D9E17_16960 PF00285 Citrate synthase, C-terminal domain D9E17_16970 PF00158 Sigma-54 interaction domain D9E17_16970 PF06506 Propionate catabolism activator D9E17_16970 PF02954 Bacterial regulatory protein, Fis family D9E17_16975 PF07338 Protein of unknown function (DUF1471) D9E17_16980 PF01810 LysE type translocator D9E17_16995 PF00107 Zinc-binding dehydrogenase D9E17_16995 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_17000 PF07969 Amidohydrolase family D9E17_17005 PF00696 Amino acid kinase family D9E17_17015 PF06545 Protein of unknown function (DUF1116) D9E17_17020 PF02629 CoA binding domain D9E17_17020 PF00549 CoA-ligase D9E17_17025 PF11392 Protein of unknown function (DUF2877) D9E17_17030 PF12796 Ankyrin repeats (3 copies) D9E17_17035 PF06496 Protein of unknown function (DUF1097) D9E17_17040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_17040 PF03466 LysR substrate binding domain D9E17_17045 PF00563 EAL domain D9E17_17045 PF00196 Bacterial regulatory proteins, luxR family D9E17_17050 PF02028 BCCT, betaine/carnitine/choline family transporter D9E17_17055 PF13977 BetI-type transcriptional repressor, C-terminal D9E17_17055 PF00440 Bacterial regulatory proteins, tetR family D9E17_17060 PF00171 Aldehyde dehydrogenase family D9E17_17065 PF00732 GMC oxidoreductase D9E17_17065 PF05199 GMC oxidoreductase D9E17_17075 PF02589 LUD domain D9E17_17080 PF02589 LUD domain D9E17_17080 PF13183 4Fe-4S dicluster domain D9E17_17080 PF11870 Domain of unknown function (DUF3390) D9E17_17085 PF02754 Cysteine-rich domain D9E17_17090 PF12833 Helix-turn-helix domain D9E17_17090 PF12852 Cupin D9E17_17095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9E17_17095 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_17100 PF07338 Protein of unknown function (DUF1471) D9E17_17105 PF04224 Protein of unknown function, DUF417 D9E17_17115 PF12833 Helix-turn-helix domain D9E17_17120 PF11924 Inverse autotransporter, beta-domain D9E17_17135 PF01197 Ribosomal protein L31 D9E17_17140 PF00444 Ribosomal protein L36 D9E17_17150 PF00196 Bacterial regulatory proteins, luxR family D9E17_17155 PF16449 Fimbrillin MatB D9E17_17160 PF18649 EcpB C-terminal domain D9E17_17165 PF15976 CS1-pili formation C-terminal D9E17_17165 PF16967 E-set like domain D9E17_17180 PF03692 Putative zinc- or iron-chelating domain D9E17_17185 PF07274 Protein of unknown function (DUF1440) D9E17_17190 PF01799 [2Fe-2S] binding domain D9E17_17190 PF00111 2Fe-2S iron-sulfur cluster binding domain D9E17_17195 PF03450 CO dehydrogenase flavoprotein C-terminal domain D9E17_17195 PF00941 FAD binding domain in molybdopterin dehydrogenase D9E17_17200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D9E17_17200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D9E17_17205 PF02625 XdhC and CoxI family D9E17_17205 PF13478 XdhC Rossmann domain D9E17_17210 PF03466 LysR substrate binding domain D9E17_17220 PF12833 Helix-turn-helix domain D9E17_17235 PF06291 Bor protein D9E17_17240 PF06085 Lipoprotein Rz1 precursor D9E17_17245 PF00959 Phage lysozyme D9E17_17250 PF04971 Bacteriophage P21 holin S D9E17_17255 PF00267 Gram-negative porin D9E17_17260 PF06530 Phage antitermination protein Q D9E17_17270 PF05866 Endodeoxyribonuclease RusA D9E17_17275 PF07102 Protein of unknown function (DUF1364) D9E17_17370 PF00171 Aldehyde dehydrogenase family D9E17_17375 PF00696 Amino acid kinase family D9E17_17375 PF01472 PUA domain D9E17_17380 PF00267 Gram-negative porin D9E17_17385 PF07417 Sigma factor-binding transcriptional regulator Crl D9E17_17390 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) D9E17_17395 PF00156 Phosphoribosyl transferase domain D9E17_17400 PF07687 Peptidase dimerisation domain D9E17_17400 PF01546 Peptidase family M20/M25/M40 D9E17_17405 PF00472 RF-1 domain D9E17_17415 PF13673 Acetyltransferase (GNAT) domain D9E17_17420 PF13957 Toxin YafO, type II toxin-antitoxin system D9E17_17430 PF11798 IMS family HHH motif D9E17_17430 PF11799 impB/mucB/samB family C-terminal domain D9E17_17430 PF00817 impB/mucB/samB family D9E17_17435 PF00691 OmpA family D9E17_17435 PF13677 Membrane MotB of proton-channel complex MotA/MotB D9E17_17440 PF01618 MotA/TolQ/ExbB proton channel family D9E17_17445 PF04545 Sigma-70, region 4 D9E17_17445 PF04542 Sigma-70 region 2 D9E17_17470 PF07196 Flagellin hook IN motif D9E17_17470 PF07195 Flagellar hook-associated protein 2 C-terminus D9E17_17470 PF02465 Flagellar hook-associated protein 2 N-terminus D9E17_17480 PF00700 Bacterial flagellin C-terminal helical region D9E17_17480 PF00669 Bacterial flagellin N-terminal helical region D9E17_17495 PF00669 Bacterial flagellin N-terminal helical region D9E17_17505 PF10135 Rod binding protein D9E17_17505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D9E17_17510 PF02119 Flagellar P-ring protein D9E17_17515 PF02107 Flagellar L-ring protein D9E17_17520 PF00460 Flagella basal body rod protein D9E17_17520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_17525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_17525 PF00460 Flagella basal body rod protein D9E17_17530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_17530 PF07559 Flagellar basal body protein FlaE D9E17_17540 PF00460 Flagella basal body rod protein D9E17_17540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D9E17_17545 PF00460 Flagella basal body rod protein D9E17_17575 PF01467 Cytidylyltransferase-like D9E17_17585 PF18269 T3SS EscN ATPase C-terminal domain D9E17_17585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9E17_17595 PF01706 FliG C-terminal domain D9E17_17595 PF14842 FliG N-terminal domain D9E17_17595 PF14841 FliG middle domain D9E17_17600 PF01514 Secretory protein of YscJ/FliF family D9E17_17600 PF08345 Flagellar M-ring protein C-terminal D9E17_17605 PF02049 Flagellar hook-basal body complex protein FliE D9E17_17610 PF00158 Sigma-54 interaction domain D9E17_17610 PF02954 Bacterial regulatory protein, Fis family D9E17_17620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D9E17_17625 PF00813 FliP family D9E17_17630 PF01313 Bacterial export proteins, family 3 D9E17_17635 PF01311 Bacterial export proteins, family 1 D9E17_17645 PF00771 FHIPEP family D9E17_17655 PF00877 NlpC/P60 family D9E17_17660 PF03734 L,D-transpeptidase catalytic domain D9E17_17665 PF13230 Glutamine amidotransferases class-II D9E17_17670 PF13580 SIS domain D9E17_17675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9E17_17675 PF02770 Acyl-CoA dehydrogenase, middle domain D9E17_17675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9E17_17675 PF09317 Domain of unknown function (DUF1974) D9E17_17685 PF00795 Carbon-nitrogen hydrolase D9E17_17690 PF13808 DDE_Tnp_1-associated D9E17_17690 PF01609 Transposase DDE domain D9E17_17720 PF05638 Type VI secretion system effector, Hcp D9E17_17745 PF00929 Exonuclease D9E17_17750 PF00075 RNase H D9E17_17755 PF08241 Methyltransferase domain D9E17_17760 PF16123 Hydroxyacylglutathione hydrolase C-terminus D9E17_17760 PF00753 Metallo-beta-lactamase superfamily D9E17_17765 PF01464 Transglycosylase SLT domain D9E17_17765 PF01476 LysM domain D9E17_17770 PF08241 Methyltransferase domain D9E17_17775 PF03372 Endonuclease/Exonuclease/phosphatase family D9E17_17780 PF03466 LysR substrate binding domain D9E17_17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_17785 PF00248 Aldo/keto reductase family D9E17_17825 PF00005 ABC transporter D9E17_17825 PF09383 NIL domain D9E17_17830 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_17835 PF03180 NLPA lipoprotein D9E17_17840 PF16358 RcsF lipoprotein D9E17_17845 PF18389 TrmO C-terminal domain D9E17_17845 PF01980 tRNA-methyltransferase O D9E17_17850 PF04073 Aminoacyl-tRNA editing domain D9E17_17850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D9E17_17850 PF03129 Anticodon binding domain D9E17_17855 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family D9E17_17860 PF04170 NlpE N-terminal domain D9E17_17860 PF17185 NlpE C-terminal OB domain D9E17_17865 PF00472 RF-1 domain D9E17_17870 PF07152 YaeQ protein D9E17_17875 PF06786 Uncharacterised protein family (UPF0253) D9E17_17880 PF07073 Modulator of Rho-dependent transcription termination (ROF) D9E17_17885 PF01171 PP-loop family D9E17_17885 PF09179 TilS substrate binding domain D9E17_17885 PF11734 TilS substrate C-terminal domain D9E17_17890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D9E17_17900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D9E17_17905 PF02811 PHP domain D9E17_17905 PF07733 Bacterial DNA polymerase III alpha NTPase domain D9E17_17905 PF14579 Helix-hairpin-helix motif D9E17_17905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D9E17_17905 PF01336 OB-fold nucleic acid binding domain D9E17_17910 PF01351 Ribonuclease HII D9E17_17915 PF02684 Lipid-A-disaccharide synthetase D9E17_17920 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_17920 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D9E17_17925 PF07977 FabA-like domain D9E17_17930 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_17930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D9E17_17935 PF03938 Outer membrane protein (OmpH-like) D9E17_17940 PF07244 Surface antigen variable number repeat D9E17_17940 PF01103 Surface antigen D9E17_17945 PF02163 Peptidase family M50 D9E17_17945 PF17820 PDZ domain D9E17_17955 PF01255 Putative undecaprenyl diphosphate synthase D9E17_17960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D9E17_17960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D9E17_17960 PF13288 DXP reductoisomerase C-terminal domain D9E17_17965 PF01765 Ribosome recycling factor D9E17_17970 PF00696 Amino acid kinase family D9E17_17975 PF00889 Elongation factor TS D9E17_17980 PF00318 Ribosomal protein S2 D9E17_17985 PF00557 Metallopeptidase family M24 D9E17_17990 PF01909 Nucleotidyltransferase domain D9E17_17990 PF01966 HD domain D9E17_17990 PF08335 GlnD PII-uridylyltransferase D9E17_17990 PF01842 ACT domain D9E17_17995 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_17995 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D9E17_17995 PF14602 Hexapeptide repeat of succinyl-transferase D9E17_18000 PF00149 Calcineurin-like phosphoesterase D9E17_18010 PF11944 Protein of unknown function (DUF3461) D9E17_18015 PF05651 Putative sugar diacid recognition D9E17_18015 PF17853 GGDEF-like domain D9E17_18015 PF13556 PucR C-terminal helix-turn-helix domain D9E17_18020 PF00595 PDZ domain D9E17_18025 PF13286 Phosphohydrolase-associated domain D9E17_18025 PF01966 HD domain D9E17_18030 PF01048 Phosphorylase superfamily D9E17_18035 PF01497 Periplasmic binding protein D9E17_18040 PF03458 UPF0126 domain D9E17_18045 PF01521 Iron-sulphur cluster biosynthesis D9E17_18055 PF00654 Voltage gated chloride channel D9E17_18060 PF00202 Aminotransferase class-III D9E17_18065 PF01032 FecCD transport family D9E17_18070 PF01497 Periplasmic binding protein D9E17_18075 PF00005 ABC transporter D9E17_18080 PF07715 TonB-dependent Receptor Plug Domain D9E17_18080 PF00593 TonB dependent receptor D9E17_18085 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal D9E17_18085 PF00912 Transglycosylase D9E17_18085 PF14814 Bifunctional transglycosylase second domain D9E17_18085 PF00905 Penicillin binding protein transpeptidase domain D9E17_18090 PF08482 ATP-dependent helicase C-terminal D9E17_18090 PF04408 Helicase associated domain (HA2) D9E17_18090 PF00270 DEAD/DEAH box helicase D9E17_18090 PF00271 Helicase conserved C-terminal domain D9E17_18095 PF02834 LigT like Phosphoesterase D9E17_18100 PF03749 Sugar fermentation stimulation protein RE domain D9E17_18100 PF17746 SfsA N-terminal OB domain D9E17_18105 PF01258 Prokaryotic dksA/traR C4-type zinc finger D9E17_18110 PF00749 tRNA synthetases class I (E and Q), catalytic domain D9E17_18115 PF12627 Probable RNA and SrmB- binding site of polymerase A D9E17_18115 PF12626 Polymerase A arginine-rich C-terminus D9E17_18115 PF01743 Poly A polymerase head domain D9E17_18120 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D9E17_18130 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D9E17_18130 PF02753 Pili assembly chaperone PapD, C-terminal domain D9E17_18135 PF13953 PapC C-terminal domain D9E17_18135 PF13954 PapC N-terminal domain D9E17_18135 PF00577 Outer membrane usher protein D9E17_18140 PF00419 Fimbrial protein D9E17_18145 PF00419 Fimbrial protein D9E17_18160 PF02548 Ketopantoate hydroxymethyltransferase D9E17_18165 PF02569 Pantoate-beta-alanine ligase D9E17_18170 PF04754 Putative transposase, YhgA-like D9E17_18175 PF02261 Aspartate decarboxylase D9E17_18180 PF01522 Polysaccharide deacetylase D9E17_18185 PF03610 PTS system fructose IIA component D9E17_18190 PF01061 ABC-2 type transporter D9E17_18195 PF00005 ABC transporter D9E17_18200 PF00484 Carbonic anhydrase D9E17_18205 PF00156 Phosphoribosyl transferase domain D9E17_18210 PF01011 PQQ enzyme repeat D9E17_18215 PF00394 Multicopper oxidase D9E17_18215 PF07732 Multicopper oxidase D9E17_18215 PF07731 Multicopper oxidase D9E17_18220 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) D9E17_18225 PF17284 Spermidine synthase tetramerisation domain D9E17_18230 PF02675 S-adenosylmethionine decarboxylase D9E17_18235 PF06062 Uncharacterised protein family (UPF0231) D9E17_18240 PF00330 Aconitase family (aconitate hydratase) D9E17_18240 PF06434 Aconitate hydratase 2 N-terminus D9E17_18240 PF11791 Aconitate B N-terminal domain D9E17_18245 PF11737 Protein of unknown function (DUF3300) D9E17_18250 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_18250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9E17_18255 PF00364 Biotin-requiring enzyme D9E17_18255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D9E17_18255 PF02817 e3 binding domain D9E17_18260 PF00456 Transketolase, thiamine diphosphate binding domain D9E17_18260 PF17831 Pyruvate dehydrogenase E1 component middle domain D9E17_18265 PF00392 Bacterial regulatory proteins, gntR family D9E17_18265 PF07729 FCD domain D9E17_18270 PF00324 Amino acid permease D9E17_18275 PF17113 Regulatory signalling modulator protein AmpE D9E17_18280 PF01510 N-acetylmuramoyl-L-alanine amidase D9E17_18285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D9E17_18285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D9E17_18290 PF07963 Prokaryotic N-terminal methylation motif D9E17_18295 PF00437 Type II/IV secretion system protein D9E17_18295 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D9E17_18300 PF00482 Type II secretion system (T2SS), protein F D9E17_18305 PF00478 IMP dehydrogenase / GMP reductase domain D9E17_18310 PF01121 Dephospho-CoA kinase D9E17_18315 PF07072 Cell division protein D9E17_18320 PF03884 DNA gyrase inhibitor YacG D9E17_18325 PF00293 NUDIX domain D9E17_18330 PF01043 SecA preprotein cross-linking domain D9E17_18330 PF07516 SecA Wing and Scaffold domain D9E17_18330 PF02810 SEC-C motif D9E17_18330 PF07517 SecA DEAD-like domain D9E17_18335 PF06558 Secretion monitor precursor protein (SecM) D9E17_18340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D9E17_18345 PF12327 FtsZ family, C-terminal domain D9E17_18345 PF00091 Tubulin/FtsZ family, GTPase domain D9E17_18350 PF02491 SHS2 domain inserted in FTSA D9E17_18355 PF03799 Cell division protein FtsQ D9E17_18355 PF08478 POTRA domain, FtsQ-type D9E17_18360 PF01820 D-ala D-ala ligase N-terminus D9E17_18360 PF07478 D-ala D-ala ligase C-terminus D9E17_18365 PF01225 Mur ligase family, catalytic domain D9E17_18365 PF08245 Mur ligase middle domain D9E17_18365 PF02875 Mur ligase family, glutamate ligase domain D9E17_18370 PF04101 Glycosyltransferase family 28 C-terminal domain D9E17_18370 PF03033 Glycosyltransferase family 28 N-terminal domain D9E17_18375 PF01098 Cell cycle protein D9E17_18380 PF02875 Mur ligase family, glutamate ligase domain D9E17_18380 PF08245 Mur ligase middle domain D9E17_18385 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D9E17_18385 PF00953 Glycosyl transferase family 4 D9E17_18390 PF08245 Mur ligase middle domain D9E17_18390 PF01225 Mur ligase family, catalytic domain D9E17_18390 PF02875 Mur ligase family, glutamate ligase domain D9E17_18395 PF08245 Mur ligase middle domain D9E17_18395 PF01225 Mur ligase family, catalytic domain D9E17_18395 PF02875 Mur ligase family, glutamate ligase domain D9E17_18400 PF03717 Penicillin-binding Protein dimerisation domain D9E17_18400 PF00905 Penicillin binding protein transpeptidase domain D9E17_18405 PF04999 Cell division protein FtsL D9E17_18410 PF01795 MraW methylase family D9E17_18415 PF02381 MraZ protein, putative antitoxin-like D9E17_18420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D9E17_18420 PF00356 Bacterial regulatory proteins, lacI family D9E17_18430 PF10369 Small subunit of acetolactate synthase D9E17_18435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_18435 PF00205 Thiamine pyrophosphate enzyme, central domain D9E17_18435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9E17_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_18445 PF03466 LysR substrate binding domain D9E17_18450 PF08054 Leucine operon leader peptide D9E17_18455 PF00682 HMGL-like D9E17_18455 PF08502 LeuA allosteric (dimerisation) domain D9E17_18460 PF00180 Isocitrate/isopropylmalate dehydrogenase D9E17_18465 PF00330 Aconitase family (aconitate hydratase) D9E17_18470 PF00694 Aconitase C-terminal domain D9E17_18475 PF07690 Major Facilitator Superfamily D9E17_18485 PF12793 Sugar transport-related sRNA regulator N-term D9E17_18485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D9E17_18495 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_18500 PF00005 ABC transporter D9E17_18505 PF09335 SNARE associated Golgi protein D9E17_18510 PF12833 Helix-turn-helix domain D9E17_18510 PF02311 AraC-like ligand binding domain D9E17_18515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9E17_18520 PF11762 L-arabinose isomerase C-terminal domain D9E17_18520 PF02610 L-arabinose isomerase D9E17_18525 PF00596 Class II Aldolase and Adducin N-terminal domain D9E17_18530 PF03104 DNA polymerase family B, exonuclease domain D9E17_18530 PF00136 DNA polymerase family B D9E17_18535 PF18337 RapA N-terminal Tudor like domain D9E17_18535 PF00271 Helicase conserved C-terminal domain D9E17_18535 PF12137 RNA polymerase recycling family C-terminal D9E17_18535 PF00176 SNF2 family N-terminal domain D9E17_18535 PF18339 RapA N-terminal Tudor like domain 1 D9E17_18540 PF00849 RNA pseudouridylate synthase D9E17_18545 PF00226 DnaJ domain D9E17_18545 PF05099 Tellurite resistance protein TerB D9E17_18550 PF04453 LPS transport system D D9E17_18550 PF03968 OstA-like protein D9E17_18555 PF09312 SurA N-terminal domain D9E17_18555 PF00639 PPIC-type PPIASE domain D9E17_18560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D9E17_18565 PF00398 Ribosomal RNA adenine dimethylase D9E17_18570 PF04379 ApaG domain D9E17_18575 PF00149 Calcineurin-like phosphoesterase D9E17_18580 PF00186 Dihydrofolate reductase D9E17_18585 PF00999 Sodium/hydrogen exchanger family D9E17_18585 PF02254 TrkA-N domain D9E17_18590 PF02525 Flavodoxin-like fold D9E17_18595 PF00083 Sugar (and other) transporter D9E17_18605 PF01494 FAD binding domain D9E17_18610 PF01012 Electron transfer flavoprotein domain D9E17_18610 PF00766 Electron transfer flavoprotein FAD-binding domain D9E17_18630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D9E17_18630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9E17_18630 PF02770 Acyl-CoA dehydrogenase, middle domain D9E17_18635 PF02515 CoA-transferase family III D9E17_18640 PF13193 AMP-binding enzyme C-terminal domain D9E17_18640 PF00501 AMP-binding enzyme D9E17_18645 PF00378 Enoyl-CoA hydratase/isomerase D9E17_18650 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_18655 PF07180 CaiF/GrlA transcriptional regulator D9E17_18660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D9E17_18660 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D9E17_18660 PF02142 MGS-like domain D9E17_18665 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D9E17_18665 PF00117 Glutamine amidotransferase class-I D9E17_18670 PF05173 Dihydrodipicolinate reductase, C-terminus D9E17_18670 PF01113 Dihydrodipicolinate reductase, N-terminus D9E17_18675 PF01156 Inosine-uridine preferring nucleoside hydrolase D9E17_18680 PF02401 LytB protein D9E17_18685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D9E17_18690 PF01252 Signal peptidase (SPase) II D9E17_18695 PF00133 tRNA synthetases class I (I, L, M and V) D9E17_18695 PF08264 Anticodon-binding domain of tRNA D9E17_18695 PF06827 Zinc finger found in FPG and IleRS D9E17_18700 PF01687 Riboflavin kinase D9E17_18700 PF06574 FAD synthetase D9E17_18705 PF10837 Protein of unknown function (DUF2575) D9E17_18710 PF01649 Ribosomal protein S20 D9E17_18730 PF03466 LysR substrate binding domain D9E17_18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_18735 PF06965 Na+/H+ antiporter 1 D9E17_18745 PF01848 Hok/gef family D9E17_18750 PF01609 Transposase DDE domain D9E17_18755 PF00684 DnaJ central domain D9E17_18755 PF01556 DnaJ C terminal domain D9E17_18755 PF00226 DnaJ domain D9E17_18760 PF00012 Hsp70 protein D9E17_18765 PF10807 Protein of unknown function (DUF2541) D9E17_18770 PF13099 Domain of unknown function (DUF3944) D9E17_18770 PF03981 Ubiquinol-cytochrome C chaperone D9E17_18775 PF01184 GPR1/FUN34/yaaH family D9E17_18780 PF00994 Probable molybdopterin binding domain D9E17_18785 PF00923 Transaldolase/Fructose-6-phosphate aldolase D9E17_18790 PF01235 Sodium:alanine symporter family D9E17_18795 PF03883 Peroxide stress protein YaaA D9E17_18800 PF10697 Protein of unknown function (DUF2502) D9E17_18805 PF14821 Threonine synthase N terminus D9E17_18805 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_18810 PF00288 GHMP kinases N terminal domain D9E17_18810 PF08544 GHMP kinases C terminal D9E17_18815 PF01842 ACT domain D9E17_18815 PF00742 Homoserine dehydrogenase D9E17_18815 PF00696 Amino acid kinase family D9E17_18815 PF13840 ACT domain D9E17_18815 PF03447 Homoserine dehydrogenase, NAD binding domain D9E17_18820 PF08254 Threonine leader peptide D9E17_18825 PF00588 SpoU rRNA Methylase family D9E17_18835 PF00072 Response regulator receiver domain D9E17_18835 PF00486 Transcriptional regulatory protein, C terminal D9E17_18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_18845 PF00672 HAMP domain D9E17_18845 PF00512 His Kinase A (phospho-acceptor) domain D9E17_18850 PF00072 Response regulator receiver domain D9E17_18850 PF00486 Transcriptional regulatory protein, C terminal D9E17_18855 PF05981 CreA protein D9E17_18860 PF12833 Helix-turn-helix domain D9E17_18860 PF06445 GyrI-like small molecule binding domain D9E17_18865 PF00300 Histidine phosphatase superfamily (branch 1) D9E17_18870 PF01931 Protein of unknown function DUF84 D9E17_18875 PF01371 Trp repressor protein D9E17_18880 PF14718 Soluble lytic murein transglycosylase L domain D9E17_18880 PF01464 Transglycosylase SLT domain D9E17_18885 PF00005 ABC transporter D9E17_18885 PF12848 ABC transporter D9E17_18890 PF01381 Helix-turn-helix D9E17_18890 PF13521 AAA domain D9E17_18895 PF18073 Rubredoxin metal binding domain D9E17_18900 PF18429 Domain of unknown function (DUF5609) D9E17_18905 PF10144 Bacterial virulence factor haemolysin D9E17_18910 PF03099 Biotin/lipoate A/B protein ligase family D9E17_18910 PF10437 Bacterial lipoate protein ligase C-terminus D9E17_18920 PF01048 Phosphorylase superfamily D9E17_18925 PF01676 Metalloenzyme superfamily D9E17_18930 PF00591 Glycosyl transferase family, a/b domain D9E17_18930 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D9E17_18930 PF02885 Glycosyl transferase family, helical bundle domain D9E17_18935 PF01791 DeoC/LacD family aldolase D9E17_18940 PF11230 Protein of unknown function (DUF3029) D9E17_18945 PF04055 Radical SAM superfamily D9E17_18950 PF01026 TatD related DNase D9E17_18955 PF01734 Patatin-like phospholipase D9E17_18960 PF07043 Protein of unknown function (DUF1328) D9E17_18965 PF04972 BON domain D9E17_18970 PF03144 Elongation factor Tu domain 2 D9E17_18970 PF16658 Class II release factor RF3, C-terminal domain D9E17_18970 PF00009 Elongation factor Tu GTP binding domain D9E17_18975 PF06183 DinI-like family D9E17_18995 PF07471 Phage DNA packaging protein Nu1 D9E17_19010 PF03245 Bacteriophage Rz lysis protein D9E17_19015 PF00959 Phage lysozyme D9E17_19020 PF07041 Protein of unknown function (DUF1327) D9E17_19025 PF04971 Bacteriophage P21 holin S D9E17_19055 PF16658 Class II release factor RF3, C-terminal domain D9E17_19055 PF03144 Elongation factor Tu domain 2 D9E17_19055 PF00009 Elongation factor Tu GTP binding domain D9E17_19060 PF13419 Haloacid dehalogenase-like hydrolase D9E17_19065 PF00583 Acetyltransferase (GNAT) family D9E17_19070 PF03603 DNA polymerase III psi subunit D9E17_19075 PF05175 Methyltransferase small domain D9E17_19075 PF08468 Methyltransferase small domain N-terminal D9E17_19095 PF07256 Protein of unknown function (DUF1435) D9E17_19100 PF11575 FhuF 2Fe-2S C-terminal domain D9E17_19100 PF06276 Ferric iron reductase FhuF-like transporter D9E17_19105 PF00196 Bacterial regulatory proteins, luxR family D9E17_19110 PF00196 Bacterial regulatory proteins, luxR family D9E17_19115 PF06738 Putative threonine/serine exporter D9E17_19120 PF12821 Threonine/Serine exporter, ThrE D9E17_19125 PF17948 DnaT DNA-binding domain D9E17_19130 PF01695 IstB-like ATP binding protein D9E17_19135 PF10696 Protein of unknown function (DUF2501) D9E17_19140 PF00884 Sulfatase D9E17_19145 PF00107 Zinc-binding dehydrogenase D9E17_19145 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_19150 PF00392 Bacterial regulatory proteins, gntR family D9E17_19150 PF07729 FCD domain D9E17_19155 PF07690 Major Facilitator Superfamily D9E17_19160 PF02203 Tar ligand binding domain homologue D9E17_19160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D9E17_19160 PF00672 HAMP domain D9E17_19165 PF01047 MarR family D9E17_19170 PF01557 Fumarylacetoacetate (FAA) hydrolase family D9E17_19175 PF00171 Aldehyde dehydrogenase family D9E17_19180 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D9E17_19185 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase D9E17_19190 PF01557 Fumarylacetoacetate (FAA) hydrolase family D9E17_19195 PF03328 HpcH/HpaI aldolase/citrate lyase family D9E17_19200 PF07690 Major Facilitator Superfamily D9E17_19210 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal D9E17_19210 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal D9E17_19215 PF01613 Flavin reductase like domain D9E17_19220 PF02554 Carbon starvation protein CstA D9E17_19220 PF13722 5TM C-terminal transporter carbon starvation CstA D9E17_19225 PF04328 Selenoprotein, putative D9E17_19230 PF07683 Cobalamin synthesis protein cobW C-terminal domain D9E17_19230 PF02492 CobW/HypB/UreG, nucleotide-binding domain D9E17_19245 PF06977 SdiA-regulated D9E17_19250 PF06779 Uncharacterised MFS-type transporter YbfB D9E17_19255 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family D9E17_19260 PF07670 Nucleoside recognition D9E17_19265 PF07670 Nucleoside recognition D9E17_19270 PF01979 Amidohydrolase family D9E17_19275 PF03466 LysR substrate binding domain D9E17_19275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_19280 PF04965 Gene 25-like lysozyme D9E17_19290 PF10887 Protein of unknown function (DUF2686) D9E17_19295 PF07729 FCD domain D9E17_19295 PF00392 Bacterial regulatory proteins, gntR family D9E17_19300 PF01232 Mannitol dehydrogenase Rossmann domain D9E17_19300 PF08125 Mannitol dehydrogenase C-terminal domain D9E17_19305 PF03786 D-mannonate dehydratase (UxuA) D9E17_19310 PF02447 GntP family permease D9E17_19315 PF00419 Fimbrial protein D9E17_19315 PF09160 FimH, mannose binding D9E17_19350 PF04542 Sigma-70 region 2 D9E17_19350 PF08281 Sigma-70, region 4 D9E17_19355 PF04773 FecR protein D9E17_19355 PF16220 Domain of unknown function (DUF4880) D9E17_19360 PF07715 TonB-dependent Receptor Plug Domain D9E17_19360 PF07660 Secretin and TonB N terminus short domain D9E17_19360 PF00593 TonB dependent receptor D9E17_19365 PF01497 Periplasmic binding protein D9E17_19370 PF01032 FecCD transport family D9E17_19375 PF01032 FecCD transport family D9E17_19380 PF00005 ABC transporter D9E17_19395 PF01527 Transposase D9E17_19415 PF00107 Zinc-binding dehydrogenase D9E17_19415 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_19420 PF05872 Bacterial protein of unknown function (DUF853) D9E17_19425 PF03739 Lipopolysaccharide export system permease LptF/LptG D9E17_19430 PF03739 Lipopolysaccharide export system permease LptF/LptG D9E17_19435 PF02789 Cytosol aminopeptidase family, N-terminal domain D9E17_19435 PF00883 Cytosol aminopeptidase family, catalytic domain D9E17_19440 PF04364 DNA polymerase III chi subunit, HolC D9E17_19445 PF10458 Valyl tRNA synthetase tRNA binding arm D9E17_19445 PF00133 tRNA synthetases class I (I, L, M and V) D9E17_19445 PF08264 Anticodon-binding domain of tRNA D9E17_19450 PF05987 Bacterial protein of unknown function (DUF898) D9E17_19455 PF00583 Acetyltransferase (GNAT) family D9E17_19460 PF06877 Regulator of ribonuclease activity B D9E17_19465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D9E17_19465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D9E17_19480 PF04074 YhcH/YjgK/YiaL D9E17_19485 PF00440 Bacterial regulatory proteins, tetR family D9E17_19495 PF01042 Endoribonuclease L-PSP D9E17_19500 PF08052 PyrBI operon leader peptide D9E17_19505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D9E17_19505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D9E17_19510 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D9E17_19510 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D9E17_19515 PF01042 Endoribonuclease L-PSP D9E17_19520 PF00689 Cation transporting ATPase, C-terminus D9E17_19520 PF00690 Cation transporter/ATPase, N-terminus D9E17_19525 PF17059 MgtA leader peptide D9E17_19530 PF00356 Bacterial regulatory proteins, lacI family D9E17_19535 PF02378 Phosphotransferase system, EIIC D9E17_19535 PF00367 phosphotransferase system, EIIB D9E17_19540 PF11941 Domain of unknown function (DUF3459) D9E17_19540 PF00128 Alpha amylase, catalytic domain D9E17_19545 PF13597 Anaerobic ribonucleoside-triphosphate reductase D9E17_19545 PF03477 ATP cone domain D9E17_19555 PF07361 Cytochrome b562 D9E17_19560 PF01523 Putative modulator of DNA gyrase D9E17_19565 PF04751 Protein of unknown function (DUF615) D9E17_19570 PF08245 Mur ligase middle domain D9E17_19570 PF01225 Mur ligase family, catalytic domain D9E17_19570 PF02875 Mur ligase family, glutamate ligase domain D9E17_19575 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D9E17_19580 PF02653 Branched-chain amino acid transport system / permease component D9E17_19585 PF02653 Branched-chain amino acid transport system / permease component D9E17_19590 PF00005 ABC transporter D9E17_19595 PF13407 Periplasmic binding protein domain D9E17_19600 PF00719 Inorganic pyrophosphatase D9E17_19605 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D9E17_19610 PF04357 TamB, inner membrane protein subunit of TAM complex D9E17_19615 PF17243 POTRA domain TamA domain 1 D9E17_19615 PF07244 Surface antigen variable number repeat D9E17_19615 PF01103 Surface antigen D9E17_19620 PF01625 Peptide methionine sulfoxide reductase D9E17_19625 PF00571 CBS domain D9E17_19625 PF03471 Transporter associated domain D9E17_19625 PF01595 Cyclin M transmembrane N-terminal domain D9E17_19630 PF06526 Protein of unknown function (DUF1107) D9E17_19635 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D9E17_19640 PF00459 Inositol monophosphatase family D9E17_19645 PF02872 5'-nucleotidase, C-terminal domain D9E17_19645 PF00149 Calcineurin-like phosphoesterase D9E17_19650 PF01638 HxlR-like helix-turn-helix D9E17_19655 PF05368 NmrA-like family D9E17_19660 PF00892 EamA-like transporter family D9E17_19665 PF01814 Hemerythrin HHE cation binding domain D9E17_19665 PF04405 Domain of Unknown function (DUF542) D9E17_19670 PF00324 Amino acid permease D9E17_19675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D9E17_19675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D9E17_19685 PF04225 Opacity-associated protein A LysM-like domain D9E17_19685 PF08525 Opacity-associated protein A N-terminal motif D9E17_19690 PF17938 Tetracyclin repressor-like, C-terminal domain D9E17_19705 PF00378 Enoyl-CoA hydratase/isomerase D9E17_19710 PF01144 Coenzyme A transferase D9E17_19715 PF02910 Fumarate reductase flavoprotein C-term D9E17_19715 PF00890 FAD binding domain D9E17_19720 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D9E17_19725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D9E17_19730 PF03480 Bacterial extracellular solute-binding protein, family 7 D9E17_19735 PF03948 Ribosomal protein L9, C-terminal domain D9E17_19735 PF01281 Ribosomal protein L9, N-terminal domain D9E17_19740 PF01084 Ribosomal protein S18 D9E17_19745 PF00436 Single-strand binding protein family D9E17_19750 PF01250 Ribosomal protein S6 D9E17_19755 PF07338 Protein of unknown function (DUF1471) D9E17_19760 PF00596 Class II Aldolase and Adducin N-terminal domain D9E17_19770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D9E17_19780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_19785 PF03611 PTS system sugar-specific permease component D9E17_19795 PF00455 DeoR C terminal sensor domain D9E17_19795 PF08220 DeoR-like helix-turn-helix domain D9E17_19800 PF00326 Prolyl oligopeptidase family D9E17_19805 PF07338 Protein of unknown function (DUF1471) D9E17_19810 PF07338 Protein of unknown function (DUF1471) D9E17_19815 PF02770 Acyl-CoA dehydrogenase, middle domain D9E17_19815 PF18158 Adaptive response protein AidB N-terminal domain D9E17_19815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D9E17_19820 PF03738 Glutathionylspermidine synthase preATP-grasp D9E17_19825 PF06693 Protein of unknown function (DUF1190) D9E17_19830 PF03994 Domain of Unknown Function (DUF350) D9E17_19835 PF10679 Protein of unknown function (DUF2491) D9E17_19840 PF04012 PspA/IM30 family D9E17_19845 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) D9E17_19850 PF00588 SpoU rRNA Methylase family D9E17_19850 PF08032 RNA 2'-O ribose methyltransferase substrate binding D9E17_19855 PF00773 RNB domain D9E17_19855 PF08206 Ribonuclease B OB domain D9E17_19855 PF00575 S1 RNA binding domain D9E17_19855 PF17876 Cold shock domain D9E17_19855 PF08461 Ribonuclease R winged-helix domain D9E17_19860 PF02082 Transcriptional regulator D9E17_19865 PF00709 Adenylosuccinate synthetase D9E17_19870 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D9E17_19875 PF01145 SPFH domain / Band 7 family D9E17_19880 PF12221 Bacterial membrane protein N terminal D9E17_19880 PF01145 SPFH domain / Band 7 family D9E17_19885 PF01926 50S ribosome-binding GTPase D9E17_19885 PF16360 GTP-binding GTPase Middle Region D9E17_19885 PF13167 GTP-binding GTPase N-terminal D9E17_19890 PF17209 Hfq protein D9E17_19900 PF08676 MutL C terminal dimerisation domain D9E17_19900 PF01119 DNA mismatch repair protein, C-terminal domain D9E17_19905 PF01520 N-acetylmuramoyl-L-alanine amidase D9E17_19910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D9E17_19915 PF03853 YjeF-related protein N-terminus D9E17_19915 PF01256 Carbohydrate kinase D9E17_19920 PF08331 Domain of unknown function (DUF1730) D9E17_19945 PF00929 Exonuclease D9E17_19950 PF03193 RsgA GTPase D9E17_19955 PF02666 Phosphatidylserine decarboxylase D9E17_19960 PF12795 Mechanosensitive ion channel porin domain D9E17_19960 PF00924 Mechanosensitive ion channel D9E17_19960 PF12794 Mechanosensitive ion channel inner membrane domain 1 D9E17_19965 PF10840 Protein of unknown function (DUF2645) D9E17_19975 PF13520 Amino acid permease D9E17_19980 PF00152 tRNA synthetases class II (D, K and N) D9E17_19985 PF00890 FAD binding domain D9E17_19985 PF02910 Fumarate reductase flavoprotein C-term D9E17_19990 PF13183 4Fe-4S dicluster domain D9E17_19990 PF13085 2Fe-2S iron-sulfur cluster binding domain D9E17_19995 PF02300 Fumarate reductase subunit C D9E17_20000 PF02313 Fumarate reductase subunit D D9E17_20005 PF00144 Beta-lactamase D9E17_20010 PF08212 Lipocalin-like domain D9E17_20015 PF00893 Small Multidrug Resistance protein D9E17_20020 PF08085 Entericidin EcnA/B family D9E17_20025 PF08085 Entericidin EcnA/B family D9E17_20030 PF09285 Elongation factor P, C-terminal D9E17_20030 PF08207 Elongation factor P (EF-P) KOW-like domain D9E17_20030 PF01132 Elongation factor P (EF-P) OB domain D9E17_20035 PF04055 Radical SAM superfamily D9E17_20040 PF15922 YjeJ-like D9E17_20045 PF13698 Domain of unknown function (DUF4156) D9E17_20050 PF00118 TCP-1/cpn60 chaperonin family D9E17_20055 PF00166 Chaperonin 10 Kd subunit D9E17_20060 PF13520 Amino acid permease D9E17_20065 PF04186 FxsA cytoplasmic membrane protein D9E17_20070 PF00206 Lyase D9E17_20070 PF10415 Fumarase C C-terminus D9E17_20075 PF03605 Anaerobic c4-dicarboxylate membrane transporter D9E17_20080 PF03091 CutA1 divalent ion tolerance protein D9E17_20085 PF02683 Cytochrome C biogenesis protein transmembrane region D9E17_20085 PF11412 Disulphide bond corrector protein DsbC D9E17_20100 PF00486 Transcriptional regulatory protein, C terminal D9E17_20100 PF18500 CadC C-terminal domain 1 D9E17_20105 PF13520 Amino acid permease D9E17_20110 PF01276 Orn/Lys/Arg decarboxylase, major domain D9E17_20110 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9E17_20110 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D9E17_20115 PF00854 POT family D9E17_20120 PF00152 tRNA synthetases class II (D, K and N) D9E17_20120 PF01336 OB-fold nucleic acid binding domain D9E17_20125 PF10753 Toxin GhoT_OrtT D9E17_20130 PF11080 Endoribonuclease GhoS D9E17_20135 PF14542 GCN5-related N-acetyl-transferase D9E17_20140 PF06902 Divergent 4Fe-4S mono-cluster D9E17_20145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D9E17_20145 PF17203 Single cache domain 3 D9E17_20145 PF00989 PAS fold D9E17_20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_20150 PF00072 Response regulator receiver domain D9E17_20155 PF03605 Anaerobic c4-dicarboxylate membrane transporter D9E17_20160 PF05681 Fumarate hydratase (Fumerase) D9E17_20160 PF05683 Fumarase C-terminus D9E17_20165 PF09997 Predicted membrane protein (DUF2238) D9E17_20175 PF02056 Family 4 glycosyl hydrolase D9E17_20175 PF11975 Family 4 glycosyl hydrolase C-terminal domain D9E17_20180 PF12833 Helix-turn-helix domain D9E17_20185 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D9E17_20185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D9E17_20185 PF01276 Orn/Lys/Arg decarboxylase, major domain D9E17_20190 PF12833 Helix-turn-helix domain D9E17_20200 PF13520 Amino acid permease D9E17_20205 PF00884 Sulfatase D9E17_20205 PF08019 Phosphoethanolamine transferase EptA/EptB D9E17_20210 PF00486 Transcriptional regulatory protein, C terminal D9E17_20210 PF00072 Response regulator receiver domain D9E17_20215 PF00512 His Kinase A (phospho-acceptor) domain D9E17_20215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_20225 PF08946 Osmosensory transporter coiled coil D9E17_20225 PF00083 Sugar (and other) transporter D9E17_20230 PF13990 YjcZ-like protein D9E17_20235 PF00350 Dynamin family D9E17_20240 PF08274 PhnA Zinc-Ribbon D9E17_20240 PF03831 PhnA domain D9E17_20245 PF06983 3-demethylubiquinone-9 3-methyltransferase D9E17_20250 PF00005 ABC transporter D9E17_20260 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_20265 PF00392 Bacterial regulatory proteins, gntR family D9E17_20265 PF07702 UTRA domain D9E17_20270 PF06754 Phosphonate metabolism protein PhnG D9E17_20275 PF05845 Bacterial phosphonate metabolism protein (PhnH) D9E17_20280 PF05861 Bacterial phosphonate metabolism protein (PhnI) D9E17_20285 PF06007 Phosphonate metabolism protein PhnJ D9E17_20290 PF00005 ABC transporter D9E17_20295 PF00005 ABC transporter D9E17_20300 PF07969 Amidohydrolase family D9E17_20310 PF00583 Acetyltransferase (GNAT) family D9E17_20315 PF12706 Beta-lactamase superfamily domain D9E17_20325 PF02502 Ribose/Galactose Isomerase D9E17_20330 PF01380 SIS domain D9E17_20330 PF01418 Helix-turn-helix domain, rpiR family D9E17_20335 PF13407 Periplasmic binding protein domain D9E17_20340 PF00005 ABC transporter D9E17_20345 PF02653 Branched-chain amino acid transport system / permease component D9E17_20350 PF00834 Ribulose-phosphate 3 epimerase family D9E17_20355 PF00480 ROK family D9E17_20360 PF00753 Metallo-beta-lactamase superfamily D9E17_20360 PF14864 Alkyl sulfatase C-terminal D9E17_20360 PF14863 Alkyl sulfatase dimerisation D9E17_20365 PF17090 Uncharacterised protein family D9E17_20370 PF00529 HlyD membrane-fusion protein of T1SS D9E17_20370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D9E17_20375 PF04632 Fusaric acid resistance protein family D9E17_20380 PF02321 Outer membrane efflux protein D9E17_20390 PF08238 Sel1 repeat D9E17_20395 PF00375 Sodium:dicarboxylate symporter family D9E17_20405 PF03918 Cytochrome C biogenesis protein D9E17_20410 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D9E17_20410 PF01578 Cytochrome C assembly protein D9E17_20415 PF03916 Polysulphide reductase, NrfD D9E17_20420 PF13247 4Fe-4S dicluster domain D9E17_20420 PF00037 4Fe-4S binding domain D9E17_20425 PF13435 Cytochrome c554 and c-prime D9E17_20425 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) D9E17_20430 PF02335 Cytochrome c552 D9E17_20435 PF16177 Acetyl-coenzyme A synthetase N-terminus D9E17_20435 PF13193 AMP-binding enzyme C-terminal domain D9E17_20435 PF00501 AMP-binding enzyme D9E17_20440 PF04341 Protein of unknown function, DUF485 D9E17_20445 PF00474 Sodium:solute symporter family D9E17_20450 PF00805 Pentapeptide repeats (8 copies) D9E17_20455 PF00999 Sodium/hydrogen exchanger family D9E17_20460 PF00860 Permease family D9E17_20465 PF09278 MerR, DNA binding D9E17_20465 PF00376 MerR family regulatory protein D9E17_20470 PF12833 Helix-turn-helix domain D9E17_20475 PF12792 CSS motif domain associated with EAL D9E17_20475 PF00563 EAL domain D9E17_20480 PF15940 Family of unknown function D9E17_20485 PF00436 Single-strand binding protein family D9E17_20490 PF00005 ABC transporter D9E17_20490 PF17755 UvrA DNA-binding domain D9E17_20490 PF17760 UvrA interaction domain D9E17_20495 PF04237 YjbR D9E17_20505 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D9E17_20515 PF00155 Aminotransferase class I and II D9E17_20520 PF00842 Alanine racemase, C-terminal domain D9E17_20520 PF01168 Alanine racemase, N-terminal domain D9E17_20525 PF03796 DnaB-like helicase C terminal domain D9E17_20525 PF00772 DnaB-like helicase N terminal domain D9E17_20530 PF00107 Zinc-binding dehydrogenase D9E17_20530 PF08240 Alcohol dehydrogenase GroES-like domain D9E17_20535 PF09583 Phage shock protein G (Phageshock_PspG) D9E17_20540 PF01207 Dihydrouridine synthase (Dus) D9E17_20545 PF10897 Protein of unknown function (DUF2713) D9E17_20555 PF01475 Ferric uptake regulator family D9E17_20560 PF05532 CsbD-like D9E17_20565 PF01554 MatE D9E17_20570 PF00717 Peptidase S24-like D9E17_20570 PF01726 LexA DNA binding domain D9E17_20575 PF01219 Prokaryotic diacylglycerol kinase D9E17_20580 PF01553 Acyltransferase D9E17_20585 PF01040 UbiA prenyltransferase family D9E17_20590 PF04345 Chorismate lyase D9E17_20600 PF07148 Maltose operon periplasmic protein precursor (MalM) D9E17_20605 PF02264 LamB porin D9E17_20610 PF17912 MalK OB fold domain D9E17_20610 PF00005 ABC transporter D9E17_20615 PF01547 Bacterial extracellular solute-binding protein D9E17_20620 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_20620 PF14785 Maltose transport system permease protein MalF P2 domain D9E17_20625 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_20630 PF00083 Sugar (and other) transporter D9E17_20635 PF06146 Phosphate-starvation-inducible E D9E17_20640 PF17089 Uncharacterised protein family D9E17_20645 PF06082 Exopolysaccharide biosynthesis protein YbjH D9E17_20650 PF06251 Capsule biosynthesis GfcC D9E17_20655 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF D9E17_20660 PF11106 Exopolysaccharide production protein YjbE D9E17_20665 PF00342 Phosphoglucose isomerase D9E17_20670 PF00696 Amino acid kinase family D9E17_20670 PF01842 ACT domain D9E17_20675 PF11656 YjbD family (DUF3811) D9E17_20680 PF01479 S4 domain D9E17_20680 PF00849 RNA pseudouridylate synthase D9E17_20685 PF03575 Peptidase family S51 D9E17_20690 PF02690 Na+/Pi-cotransporter D9E17_20695 PF02310 B12 binding domain D9E17_20695 PF02607 B12 binding domain D9E17_20695 PF02965 Vitamin B12 dependent methionine synthase, activation domain D9E17_20695 PF02574 Homocysteine S-methyltransferase D9E17_20695 PF00809 Pterin binding enzyme D9E17_20700 PF09339 IclR helix-turn-helix domain D9E17_20700 PF01614 Bacterial transcriptional regulator D9E17_20705 PF07906 ShET2 enterotoxin, N-terminal region D9E17_20705 PF07906 ShET2 enterotoxin, N-terminal region D9E17_20710 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) D9E17_20715 PF00463 Isocitrate lyase family D9E17_20720 PF01274 Malate synthase D9E17_20725 PF04204 Homoserine O-succinyltransferase D9E17_20730 PF13673 Acetyltransferase (GNAT) domain D9E17_20760 PF01808 AICARFT/IMPCHase bienzyme D9E17_20760 PF02142 MGS-like domain D9E17_20765 PF02844 Phosphoribosylglycinamide synthetase, N domain D9E17_20765 PF02843 Phosphoribosylglycinamide synthetase, C domain D9E17_20765 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D9E17_20770 PF02954 Bacterial regulatory protein, Fis family D9E17_20770 PF00158 Sigma-54 interaction domain D9E17_20770 PF00072 Response regulator receiver domain D9E17_20775 PF00512 His Kinase A (phospho-acceptor) domain D9E17_20775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_20780 PF13801 Heavy-metal resistance D9E17_20785 PF07356 Protein of unknown function (DUF1481) D9E17_20790 PF00216 Bacterial DNA-binding protein D9E17_20795 PF04222 Protein of unknown function (DUF416) D9E17_20800 PF04493 Endonuclease V D9E17_20805 PF01208 Uroporphyrinogen decarboxylase (URO-D) D9E17_20810 PF00293 NUDIX domain D9E17_20810 PF09297 NADH pyrophosphatase zinc ribbon domain D9E17_20815 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D9E17_20820 PF01964 Radical SAM ThiC family D9E17_20820 PF13667 ThiC-associated domain D9E17_20825 PF02581 Thiamine monophosphate synthase D9E17_20830 PF00899 ThiF family D9E17_20835 PF02597 ThiS family D9E17_20840 PF05690 Thiazole biosynthesis protein ThiG D9E17_20845 PF06968 Biotin and Thiamin Synthesis associated domain D9E17_20845 PF04055 Radical SAM superfamily D9E17_20855 PF00623 RNA polymerase Rpb1, domain 2 D9E17_20855 PF04998 RNA polymerase Rpb1, domain 5 D9E17_20855 PF04997 RNA polymerase Rpb1, domain 1 D9E17_20855 PF04983 RNA polymerase Rpb1, domain 3 D9E17_20855 PF05000 RNA polymerase Rpb1, domain 4 D9E17_20860 PF04565 RNA polymerase Rpb2, domain 3 D9E17_20860 PF04563 RNA polymerase beta subunit D9E17_20860 PF10385 RNA polymerase beta subunit external 1 domain D9E17_20860 PF00562 RNA polymerase Rpb2, domain 6 D9E17_20860 PF04560 RNA polymerase Rpb2, domain 7 D9E17_20860 PF04561 RNA polymerase Rpb2, domain 2 D9E17_20865 PF00542 Ribosomal protein L7/L12 C-terminal domain D9E17_20865 PF16320 Ribosomal protein L7/L12 dimerisation domain D9E17_20870 PF00466 Ribosomal protein L10 D9E17_20875 PF00687 Ribosomal protein L1p/L10e family D9E17_20880 PF03946 Ribosomal protein L11, N-terminal domain D9E17_20880 PF00298 Ribosomal protein L11, RNA binding domain D9E17_20885 PF02357 Transcription termination factor nusG D9E17_20885 PF00467 KOW motif D9E17_20890 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D9E17_20895 PF03143 Elongation factor Tu C-terminal domain D9E17_20895 PF03144 Elongation factor Tu domain 2 D9E17_20895 PF00009 Elongation factor Tu GTP binding domain D9E17_20920 PF00485 Phosphoribulokinase / Uridine kinase family D9E17_20925 PF08279 HTH domain D9E17_20925 PF02237 Biotin protein ligase C terminal domain D9E17_20925 PF03099 Biotin/lipoate A/B protein ligase family D9E17_20930 PF01565 FAD binding domain D9E17_20930 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D9E17_20960 PF01177 Asp/Glu/Hydantoin racemase D9E17_20965 PF00593 TonB dependent receptor D9E17_20965 PF07715 TonB-dependent Receptor Plug Domain D9E17_20970 PF05958 tRNA (Uracil-5-)-methyltransferase D9E17_20975 PF07226 Protein of unknown function (DUF1422) D9E17_20980 PF00440 Bacterial regulatory proteins, tetR family D9E17_20985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9E17_20985 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_20990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_20990 PF03466 LysR substrate binding domain D9E17_20995 PF00206 Lyase D9E17_20995 PF14698 Argininosuccinate lyase C-terminal D9E17_21000 PF00696 Amino acid kinase family D9E17_21005 PF01118 Semialdehyde dehydrogenase, NAD binding domain D9E17_21005 PF02774 Semialdehyde dehydrogenase, dimerisation domain D9E17_21010 PF07687 Peptidase dimerisation domain D9E17_21010 PF01546 Peptidase family M20/M25/M40 D9E17_21015 PF00311 Phosphoenolpyruvate carboxylase D9E17_21020 PF00884 Sulfatase D9E17_21025 PF12833 Helix-turn-helix domain D9E17_21030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_21035 PF04055 Radical SAM superfamily D9E17_21045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_21055 PF02896 PEP-utilising enzyme, TIM barrel domain D9E17_21055 PF00381 PTS HPr component phosphorylation site D9E17_21055 PF00391 PEP-utilising enzyme, mobile domain D9E17_21055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_21055 PF05524 PEP-utilising enzyme, N-terminal D9E17_21060 PF00923 Transaldolase/Fructose-6-phosphate aldolase D9E17_21065 PF00465 Iron-containing alcohol dehydrogenase D9E17_21075 PF00892 EamA-like transporter family D9E17_21080 PF00141 Peroxidase D9E17_21085 PF02219 Methylenetetrahydrofolate reductase D9E17_21090 PF00696 Amino acid kinase family D9E17_21090 PF00742 Homoserine dehydrogenase D9E17_21090 PF03447 Homoserine dehydrogenase, NAD binding domain D9E17_21095 PF01053 Cys/Met metabolism PLP-dependent enzyme D9E17_21100 PF01340 Met Apo-repressor, MetJ D9E17_21105 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family D9E17_21120 PF03527 RHS protein D9E17_21120 PF05593 RHS Repeat D9E17_21120 PF03527 RHS protein D9E17_21120 PF05593 RHS Repeat D9E17_21125 PF01197 Ribosomal protein L31 D9E17_21130 PF18074 Primosomal protein N C-terminal domain D9E17_21130 PF17764 3′ DNA-binding domain (3′BD) D9E17_21130 PF00271 Helicase conserved C-terminal domain D9E17_21130 PF00270 DEAD/DEAH box helicase D9E17_21130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D9E17_21135 PF00356 Bacterial regulatory proteins, lacI family D9E17_21140 PF05036 Sporulation related domain D9E17_21145 PF00227 Proteasome subunit D9E17_21150 PF00004 ATPase family associated with various cellular activities (AAA) D9E17_21150 PF07724 AAA domain (Cdc48 subfamily) D9E17_21150 PF10431 C-terminal, D2-small domain, of ClpB protein D9E17_21155 PF01040 UbiA prenyltransferase family D9E17_21160 PF03737 Aldolase/RraA D9E17_21165 PF06005 Cell division protein ZapB D9E17_21170 PF00230 Major intrinsic protein D9E17_21175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9E17_21175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9E17_21180 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D9E17_21185 PF00175 Oxidoreductase NAD-binding domain D9E17_21185 PF00970 Oxidoreductase FAD-binding domain D9E17_21190 PF00582 Universal stress protein family D9E17_21195 PF04175 Protein of unknown function (DUF406) D9E17_21200 PF05656 Protein of unknown function (DUF805) D9E17_21205 PF07305 Protein of unknown function (DUF1454) D9E17_21210 PF00121 Triosephosphate isomerase D9E17_21215 PF02611 CDP-diacylglycerol pyrophosphatase D9E17_21225 PF00365 Phosphofructokinase D9E17_21230 PF16916 Dimerisation domain of Zinc Transporter D9E17_21230 PF01545 Cation efflux family D9E17_21235 PF07813 LTXXQ motif family protein D9E17_21240 PF00072 Response regulator receiver domain D9E17_21240 PF00486 Transcriptional regulatory protein, C terminal D9E17_21245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_21245 PF00672 HAMP domain D9E17_21245 PF00512 His Kinase A (phospho-acceptor) domain D9E17_21245 PF16527 Two-component sensor protein CpxA, periplasmic domain D9E17_21250 PF03473 MOSC domain D9E17_21250 PF03475 3-alpha domain D9E17_21255 PF03812 2-keto-3-deoxygluconate permease D9E17_21260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D9E17_21260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D9E17_21265 PF06379 L-rhamnose-proton symport protein (RhaT) D9E17_21270 PF02311 AraC-like ligand binding domain D9E17_21270 PF12833 Helix-turn-helix domain D9E17_21275 PF02311 AraC-like ligand binding domain D9E17_21275 PF12833 Helix-turn-helix domain D9E17_21280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D9E17_21280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D9E17_21285 PF06134 L-rhamnose isomerase (RhaA) D9E17_21290 PF00596 Class II Aldolase and Adducin N-terminal domain D9E17_21295 PF05336 L-rhamnose mutarotase D9E17_21305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_21310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D9E17_21310 PF02378 Phosphotransferase system, EIIC D9E17_21315 PF05343 M42 glutamyl aminopeptidase D9E17_21320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D9E17_21320 PF08279 HTH domain D9E17_21325 PF12889 Protein of unknown function (DUF3829) D9E17_21330 PF02634 FdhD/NarQ family D9E17_21340 PF13247 4Fe-4S dicluster domain D9E17_21340 PF09163 Formate dehydrogenase N, transmembrane D9E17_21345 PF01292 Prokaryotic cytochrome b561 D9E17_21350 PF04216 Protein involved in formate dehydrogenase formation D9E17_21360 PF01402 Ribbon-helix-helix protein, copG family D9E17_21365 PF00583 Acetyltransferase (GNAT) family D9E17_21365 PF09500 Putative thioesterase (yiiD_Cterm) D9E17_21370 PF02580 D-Tyr-tRNA(Tyr) deacylase D9E17_21375 PF03631 Virulence factor BrkB D9E17_21380 PF13419 Haloacid dehalogenase-like hydrolase D9E17_21385 PF08220 DeoR-like helix-turn-helix domain D9E17_21385 PF00455 DeoR C terminal sensor domain D9E17_21390 PF00294 pfkB family carbohydrate kinase D9E17_21395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D9E17_21395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D9E17_21400 PF01791 DeoC/LacD family aldolase D9E17_21410 PF01263 Aldose 1-epimerase D9E17_21415 PF01055 Glycosyl hydrolases family 31 D9E17_21430 PF06178 Oligogalacturonate-specific porin protein (KdgM) D9E17_21435 PF07690 Major Facilitator Superfamily D9E17_21440 PF01261 Xylose isomerase-like TIM barrel D9E17_21445 PF07702 UTRA domain D9E17_21445 PF00392 Bacterial regulatory proteins, gntR family D9E17_21455 PF00120 Glutamine synthetase, catalytic domain D9E17_21455 PF03951 Glutamine synthetase, beta-Grasp domain D9E17_21460 PF00512 His Kinase A (phospho-acceptor) domain D9E17_21460 PF00989 PAS fold D9E17_21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D9E17_21465 PF00158 Sigma-54 interaction domain D9E17_21465 PF00072 Response regulator receiver domain D9E17_21465 PF02954 Bacterial regulatory protein, Fis family D9E17_21475 PF06969 HemN C-terminal domain D9E17_21475 PF04055 Radical SAM superfamily D9E17_21480 PF04220 Der GTPase activator (YihI) D9E17_21485 PF01926 50S ribosome-binding GTPase D9E17_21490 PF01367 5'-3' exonuclease, C-terminal SAM fold D9E17_21490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D9E17_21490 PF00476 DNA polymerase family A D9E17_21490 PF01612 3'-5' exonuclease D9E17_21500 PF01553 Acyltransferase D9E17_21505 PF06097 Bacterial protein of unknown function (DUF945) D9E17_21510 PF01323 DSBA-like thioredoxin domain D9E17_21515 PF01636 Phosphotransferase enzyme family D9E17_21520 PF06288 Protein of unknown function (DUF1040) D9E17_21525 PF12804 MobA-like NTP transferase domain D9E17_21530 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D9E17_21560 PF12724 Flavodoxin domain D9E17_21565 PF02386 Cation transport protein D9E17_21570 PF01205 Uncharacterized protein family UPF0029 D9E17_21570 PF09186 Domain of unknown function (DUF1949) D9E17_21575 PF00557 Metallopeptidase family M24 D9E17_21580 PF00378 Enoyl-CoA hydratase/isomerase D9E17_21580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D9E17_21580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D9E17_21585 PF00108 Thiolase, N-terminal domain D9E17_21585 PF02803 Thiolase, C-terminal domain D9E17_21590 PF00175 Oxidoreductase NAD-binding domain D9E17_21590 PF00970 Oxidoreductase FAD-binding domain D9E17_21595 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D9E17_21600 PF02357 Transcription termination factor nusG D9E17_21605 PF01026 TatD related DNase D9E17_21610 PF00902 Sec-independent protein translocase protein (TatC) D9E17_21620 PF02416 mttA/Hcf106 family D9E17_21625 PF03109 ABC1 family D9E17_21630 PF02036 SCP-2 sterol transfer family D9E17_21635 PF01209 ubiE/COQ5 methyltransferase family D9E17_21640 PF02646 RmuC family D9E17_21645 PF01048 Phosphorylase superfamily D9E17_21650 PF01738 Dienelactone hydrolase family D9E17_21655 PF01717 Cobalamin-independent synthase, Catalytic domain D9E17_21655 PF08267 Cobalamin-independent synthase, N-terminal domain D9E17_21660 PF03466 LysR substrate binding domain D9E17_21660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_21665 PF00892 EamA-like transporter family D9E17_21675 PF12146 Serine aminopeptidase, S33 D9E17_21680 PF01810 LysE type translocator D9E17_21685 PF01810 LysE type translocator D9E17_21690 PF00271 Helicase conserved C-terminal domain D9E17_21690 PF00270 DEAD/DEAH box helicase D9E17_21690 PF16124 RecQ zinc-binding D9E17_21690 PF09382 RQC domain D9E17_21690 PF00570 HRDC domain D9E17_21695 PF02253 Phospholipase A1 D9E17_21700 PF03061 Thioesterase superfamily D9E17_21705 PF00892 EamA-like transporter family D9E17_21715 PF10947 Protein of unknown function (DUF2628) D9E17_21720 PF01544 CorA-like Mg2+ transporter protein D9E17_21725 PF09992 Phosphodiester glycosidase D9E17_21730 PF13361 UvrD-like helicase C-terminal domain D9E17_21730 PF00580 UvrD/REP helicase N-terminal domain D9E17_21735 PF13419 Haloacid dehalogenase-like hydrolase D9E17_21740 PF02899 Phage integrase, N-terminal SAM-like domain D9E17_21740 PF00589 Phage integrase family D9E17_21745 PF04340 Protein of unknown function, DUF484 D9E17_21750 PF01678 Diaminopimelate epimerase D9E17_21755 PF13627 Prokaryotic lipoprotein-attachment site D9E17_21765 PF01491 Frataxin-like domain D9E17_21770 PF01295 Adenylate cyclase, class-I D9E17_21770 PF12633 Adenylate cyclase NT domain D9E17_21775 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D9E17_21775 PF03900 Porphobilinogen deaminase, C-terminal domain D9E17_21780 PF02602 Uroporphyrinogen-III synthase HemD D9E17_21785 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D9E17_21790 PF07219 HemY protein N-terminus D9E17_21790 PF07719 Tetratricopeptide repeat D9E17_21795 PF13186 Iron-sulfur cluster-binding domain D9E17_21795 PF04055 Radical SAM superfamily D9E17_21820 PF00324 Amino acid permease D9E17_21825 PF03808 Glycosyl transferase WecB/TagA/CpsF family D9E17_21830 PF06899 WzyE protein, O-antigen assembly polymerase D9E17_21835 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D9E17_21840 PF01943 Polysaccharide biosynthesis protein D9E17_21845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D9E17_21855 PF00483 Nucleotidyl transferase D9E17_21860 PF16363 GDP-mannose 4,6 dehydratase D9E17_21865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D9E17_21865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D9E17_21865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D9E17_21870 PF02350 UDP-N-acetylglucosamine 2-epimerase D9E17_21875 PF02706 Chain length determinant protein D9E17_21880 PF00953 Glycosyl transferase family 4 D9E17_21885 PF07497 Rho termination factor, RNA-binding domain D9E17_21885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9E17_21885 PF07498 Rho termination factor, N-terminal domain D9E17_21895 PF00085 Thioredoxin D9E17_21900 PF00271 Helicase conserved C-terminal domain D9E17_21900 PF00270 DEAD/DEAH box helicase D9E17_21905 PF02541 Ppx/GppA phosphatase family D9E17_21910 PF00580 UvrD/REP helicase N-terminal domain D9E17_21910 PF13361 UvrD-like helicase C-terminal domain D9E17_21925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D9E17_21925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D9E17_21930 PF03466 LysR substrate binding domain D9E17_21930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_21935 PF00291 Pyridoxal-phosphate dependent enzyme D9E17_21935 PF00585 C-terminal regulatory domain of Threonine dehydratase D9E17_21940 PF00920 Dehydratase family D9E17_21945 PF01063 Amino-transferase class IV D9E17_21955 PF00205 Thiamine pyrophosphate enzyme, central domain D9E17_21955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D9E17_21955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D9E17_21965 PF08046 IlvGEDA operon leader peptide D9E17_21970 PF01078 Magnesium chelatase, subunit ChlI D9E17_21970 PF13335 Magnesium chelatase, subunit ChlI C-terminal D9E17_21975 PF04219 Protein of unknown function, DUF D9E17_21980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_21980 PF03466 LysR substrate binding domain D9E17_22015 PF07729 FCD domain D9E17_22015 PF00392 Bacterial regulatory proteins, gntR family D9E17_22020 PF07690 Major Facilitator Superfamily D9E17_22025 PF00356 Bacterial regulatory proteins, lacI family D9E17_22030 PF00294 pfkB family carbohydrate kinase D9E17_22035 PF13407 Periplasmic binding protein domain D9E17_22040 PF02653 Branched-chain amino acid transport system / permease component D9E17_22045 PF00005 ABC transporter D9E17_22050 PF05025 RbsD / FucU transport protein family D9E17_22055 PF02705 K+ potassium transporter D9E17_22060 PF12592 Protein of unknown function (DUF3763) D9E17_22060 PF17868 AAA lid domain D9E17_22060 PF07728 AAA domain (dynein-related subfamily) D9E17_22065 PF05762 VWA domain containing CoxE-like protein D9E17_22070 PF03590 Aspartate-ammonia ligase D9E17_22075 PF01037 Lrp/AsnC ligand binding domain D9E17_22080 PF00258 Flavodoxin D9E17_22085 PF01134 Glucose inhibited division protein A D9E17_22085 PF13932 GidA associated domain D9E17_22090 PF02527 rRNA small subunit methyltransferase G D9E17_22095 PF03899 ATP synthase I chain D9E17_22100 PF00119 ATP synthase A chain D9E17_22105 PF00137 ATP synthase subunit C D9E17_22110 PF00430 ATP synthase B/B' CF(0) D9E17_22115 PF00213 ATP synthase delta (OSCP) subunit D9E17_22120 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9E17_22120 PF00306 ATP synthase alpha/beta chain, C terminal domain D9E17_22120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9E17_22125 PF00231 ATP synthase D9E17_22130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D9E17_22130 PF02874 ATP synthase alpha/beta family, beta-barrel domain D9E17_22135 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D9E17_22135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D9E17_22145 PF14602 Hexapeptide repeat of succinyl-transferase D9E17_22145 PF12804 MobA-like NTP transferase domain D9E17_22145 PF00132 Bacterial transferase hexapeptide (six repeats) D9E17_22150 PF01380 SIS domain D9E17_22155 PF12849 PBP superfamily domain D9E17_22160 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_22165 PF00528 Binding-protein-dependent transport system inner membrane component D9E17_22170 PF00005 ABC transporter D9E17_22175 PF01895 PhoU domain D9E17_22195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D9E17_22195 PF00367 phosphotransferase system, EIIB D9E17_22195 PF02378 Phosphotransferase system, EIIC D9E17_22200 PF00232 Glycosyl hydrolase family 1 D9E17_22205 PF11471 Maltoporin periplasmic N-terminal extension D9E17_22205 PF02264 LamB porin D9E17_22210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D9E17_22210 PF00756 Putative esterase D9E17_22215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D9E17_22230 PF13419 Haloacid dehalogenase-like hydrolase D9E17_22235 PF00860 Permease family D9E17_22240 PF03358 NADPH-dependent FMN reductase D9E17_22250 PF03466 LysR substrate binding domain D9E17_22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D9E17_22255 PF07690 Major Facilitator Superfamily D9E17_22260 PF03222 Tryptophan/tyrosine permease family D9E17_22265 PF01212 Beta-eliminating lyase D9E17_22270 PF08053 Tryptophanase operon leader peptide D9E17_22275 PF12631 MnmE helical domain D9E17_22275 PF10396 GTP-binding protein TrmE N-terminus D9E17_22275 PF01926 50S ribosome-binding GTPase D9E17_22280 PF14849 YidC periplasmic domain D9E17_22280 PF02096 60Kd inner membrane protein D9E17_22285 PF01809 Putative membrane protein insertion efficiency factor D9E17_22290 PF00825 Ribonuclease P D9E17_22295 PF00468 Ribosomal protein L34 D9E17_22315 PF00186 Dihydrofolate reductase D9E17_22320 PF00589 Phage integrase family D9E17_22320 PF13495 Phage integrase, N-terminal SAM-like domain D9E17_22330 PF13610 DDE domain D9E17_22345 PF03707 Bacterial signalling protein N terminal repeat D9E17_22345 PF00990 Diguanylate cyclase, GGDEF domain D9E17_22345 PF00563 EAL domain D9E17_22345 PF13188 PAS domain D9E17_22350 PF05052 MerE protein D9E17_22355 PF13411 MerR HTH family regulatory protein D9E17_22360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D9E17_22360 PF00403 Heavy-metal-associated domain D9E17_22360 PF07992 Pyridine nucleotide-disulphide oxidoreductase D9E17_22365 PF03203 MerC mercury resistance protein D9E17_22370 PF00403 Heavy-metal-associated domain D9E17_22375 PF02411 MerT mercuric transport protein D9E17_22380 PF00376 MerR family regulatory protein D9E17_22380 PF09278 MerR, DNA binding D9E17_22400 PF02909 Tetracyclin repressor-like, C-terminal domain D9E17_22400 PF00440 Bacterial regulatory proteins, tetR family D9E17_22405 PF07690 Major Facilitator Superfamily D9E17_22410 PF00892 EamA-like transporter family D9E17_22425 PF02796 Helix-turn-helix domain of resolvase D9E17_22425 PF00239 Resolvase, N terminal domain D9E17_22430 PF13700 Domain of unknown function (DUF4158) D9E17_22430 PF01526 Tn3 transposase DDE domain D9E17_22435 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D9E17_22445 PF02517 CPBP intramembrane metalloprotease D9E17_22460 PF02387 IncFII RepA protein family D9E17_22465 PF08048 Tap RepA1 leader peptide D9E17_22470 PF10723 Replication regulatory protein RepB D9E17_22480 PF12161 HsdM N-terminal domain D9E17_22480 PF02384 N-6 DNA Methylase D9E17_22485 PF08463 EcoEI R protein C-terminal D9E17_22485 PF00271 Helicase conserved C-terminal domain D9E17_22485 PF04851 Type III restriction enzyme, res subunit D9E17_22485 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D9E17_22500 PF12602 Fertility inhibition protein N terminal D9E17_22500 PF04352 ProQ/FINO family D9E17_22505 PF12477 Sex factor F TraW protein N terminal D9E17_22510 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) D9E17_22540 PF01848 Hok/gef family D9E17_22545 PF06952 PsiA protein D9E17_22550 PF06290 Plasmid SOS inhibition protein (PsiB) D9E17_22555 PF02195 ParB-like nuclease domain D9E17_22560 PF06006 Bacterial protein of unknown function (DUF905) D9E17_22565 PF00436 Single-strand binding protein family D9E17_22605 PF07128 Protein of unknown function (DUF1380) D9E17_22610 PF03230 Antirestriction protein D9E17_22650 PF01278 Omptin family D9E17_22675 PF00589 Phage integrase family D9E17_22680 PF01051 Initiator Replication protein D9E17_22715 PF01297 Zinc-uptake complex component A periplasmic D9E17_22720 PF00005 ABC transporter D9E17_22725 PF00950 ABC 3 transport family D9E17_22730 PF00950 ABC 3 transport family D9E17_22775 PF13614 AAA domain D9E17_22780 PF02195 ParB-like nuclease domain D9E17_22780 PF18090 Centromere-binding protein HTH domain D9E17_22830 PF02492 CobW/HypB/UreG, nucleotide-binding domain D9E17_22830 PF07683 Cobalamin synthesis protein cobW C-terminal domain D9E17_22845 PF06291 Bor protein D9E17_22870 PF06722 Protein of unknown function (DUF1205) D9E17_22875 PF00664 ABC transporter transmembrane region D9E17_22875 PF00005 ABC transporter D9E17_22880 PF00756 Putative esterase D9E17_22880 PF11806 Domain of unknown function (DUF3327) D9E17_22885 PF00756 Putative esterase D9E17_22890 PF00593 TonB dependent receptor D9E17_22890 PF07715 TonB-dependent Receptor Plug Domain D9E17_22950 PF03857 Colicin immunity protein D9E17_22960 PF14859 Colicin M D9E17_22965 PF13995 YebF-like protein D9E17_22970 PF00589 Phage integrase family D9E17_22990 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D9E17_22995 PF01850 PIN domain D9E17_23000 PF02463 RecF/RecN/SMC N terminal domain D9E17_23005 PF13610 DDE domain D9E17_23030 PF13438 Domain of unknown function (DUF4113) D9E17_23030 PF00817 impB/mucB/samB family D9E17_23030 PF11799 impB/mucB/samB family C-terminal domain D9E17_23045 PF13610 DDE domain D9E17_23055 PF00106 short chain dehydrogenase D9E17_23065 PF00809 Pterin binding enzyme D9E17_23080 PF00893 Small Multidrug Resistance protein D9E17_23085 PF13427 Domain of unknown function (DUF4111) D9E17_23085 PF01909 Nucleotidyltransferase domain D9E17_23090 PF07690 Major Facilitator Superfamily D9E17_23095 PF13427 Domain of unknown function (DUF4111) D9E17_23095 PF01909 Nucleotidyltransferase domain D9E17_23105 PF13599 Pentapeptide repeats (9 copies) D9E17_23115 PF00809 Pterin binding enzyme D9E17_23120 PF00893 Small Multidrug Resistance protein