CEJ55_00010 PF02794 CEJ55_00010 CEJ55_00015 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEJ55_00015 PF08479 POTRA domain, ShlB-type CEJ55_00015 PF17287 CEJ55_00015 CEJ55_00020 PF13973 CEJ55_00020 CEJ55_00045 PF11726 CEJ55_00045 CEJ55_00050 PF11682 CEJ55_00050 CEJ55_00055 PF11682 CEJ55_00055 CEJ55_00065 PF11726 CEJ55_00065 CEJ55_00095 PF01926 50S ribosome-binding GTPase CEJ55_00100 PF03797 Autotransporter beta-domain CEJ55_00100 PF13018 CEJ55_00100 CEJ55_00100 PF16168 CEJ55_00100 CEJ55_00105 PF06006 Bacterial protein of unknown function (DUF905) CEJ55_00115 PF06067 CEJ55_00115 CEJ55_00120 PF03230 Antirestriction protein CEJ55_00125 PF04002 RadC-like JAB domain CEJ55_00130 PF06174 CEJ55_00130 CEJ55_00135 PF06154 YagB/YeeU/YfjZ family CEJ55_00140 PF06755 CEJ55_00140 CEJ55_00150 PF06117 CEJ55_00150 CEJ55_00155 PF13708 CEJ55_00155 CEJ55_00160 PF00563 EAL domain CEJ55_00160 PF12792 CEJ55_00160 CEJ55_00175 PF00486 Transcriptional regulatory protein, C terminal CEJ55_00180 PF13520 Amino acid permease CEJ55_00185 PF01276 Orn/Lys/Arg decarboxylase, major domain CEJ55_00185 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEJ55_00185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEJ55_00190 PF00854 POT family CEJ55_00195 PF00152 tRNA synthetases class II (D, K and N) CEJ55_00195 PF01336 OB-fold nucleic acid binding domain CEJ55_00200 PF10753 CEJ55_00200 CEJ55_00205 PF11080 Protein of unknown function (DUF2622) CEJ55_00215 PF14542 GCN5-related N-acetyl-transferase CEJ55_00220 PF06902 Divergent 4Fe-4S mono-cluster CEJ55_00225 PF00989 PAS fold CEJ55_00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_00225 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CEJ55_00225 PF17203 CEJ55_00225 CEJ55_00230 PF00072 Response regulator receiver domain CEJ55_00240 PF03605 CEJ55_00240 CEJ55_00245 PF05681 CEJ55_00245 CEJ55_00245 PF05683 Fumarase C-terminus CEJ55_00250 PF09997 CEJ55_00250 CEJ55_00255 PF13347 MFS/sugar transport protein CEJ55_00260 PF02056 Family 4 glycosyl hydrolase CEJ55_00260 PF11975 Family 4 glycosyl hydrolase C-terminal domain CEJ55_00270 PF12833 Helix-turn-helix domain CEJ55_00275 PF01276 Orn/Lys/Arg decarboxylase, major domain CEJ55_00275 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEJ55_00275 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEJ55_00280 PF12833 Helix-turn-helix domain CEJ55_00285 PF13520 Amino acid permease CEJ55_00290 PF00884 Sulfatase CEJ55_00290 PF08019 CEJ55_00290 CEJ55_00295 PF00072 Response regulator receiver domain CEJ55_00295 PF00486 Transcriptional regulatory protein, C terminal CEJ55_00300 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_00310 PF00083 Sugar (and other) transporter CEJ55_00310 PF08946 Osmosensory transporter coiled coil CEJ55_00315 PF13990 CEJ55_00315 CEJ55_00320 PF00350 Dynamin family CEJ55_00330 PF03831 PhnA protein CEJ55_00330 PF08274 PhnA Zinc-Ribbon CEJ55_00335 PF06983 3-demethylubiquinone-9 3-methyltransferase CEJ55_00340 PF00005 ABC transporter CEJ55_00345 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CEJ55_00350 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_00355 PF00392 Bacterial regulatory proteins, gntR family CEJ55_00355 PF07702 UTRA domain CEJ55_00360 PF06754 CEJ55_00360 CEJ55_00365 PF05845 Bacterial phosphonate metabolism protein (PhnH) CEJ55_00370 PF05861 CEJ55_00370 CEJ55_00375 PF06007 CEJ55_00375 CEJ55_00380 PF00005 ABC transporter CEJ55_00385 PF00005 ABC transporter CEJ55_00390 PF07969 Amidohydrolase family CEJ55_00395 PF13238 AAA domain CEJ55_00400 PF00583 Acetyltransferase (GNAT) family CEJ55_00405 PF12706 Beta-lactamase superfamily domain CEJ55_00415 PF02502 Ribose/Galactose Isomerase CEJ55_00420 PF00753 Metallo-beta-lactamase superfamily CEJ55_00420 PF14863 Alkyl sulfatase dimerisation CEJ55_00420 PF14864 Alkyl sulfatase C-terminal CEJ55_00425 PF17090 CEJ55_00425 CEJ55_00430 PF13437 HlyD family secretion protein CEJ55_00430 PF13533 Biotin-lipoyl like CEJ55_00435 PF04632 CEJ55_00435 CEJ55_00440 PF02321 Outer membrane efflux protein CEJ55_00450 PF08238 Sel1 repeat CEJ55_00455 PF00375 Sodium:dicarboxylate symporter family CEJ55_00470 PF03918 Cytochrome C biogenesis protein CEJ55_00475 PF01578 CEJ55_00475 CEJ55_00475 PF16327 CEJ55_00475 CEJ55_00480 PF03916 CEJ55_00480 CEJ55_00485 PF00037 4Fe-4S binding domain CEJ55_00485 PF13247 4Fe-4S dicluster domain CEJ55_00490 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CEJ55_00490 PF13435 Cytochrome c554 and c-prime CEJ55_00495 PF02335 Cytochrome c552 CEJ55_00505 PF00501 AMP-binding enzyme CEJ55_00505 PF13193 AMP-binding enzyme C-terminal domain CEJ55_00505 PF16177 CEJ55_00505 CEJ55_00510 PF04341 CEJ55_00510 CEJ55_00515 PF00474 Sodium:solute symporter family CEJ55_00520 PF00805 Pentapeptide repeats (8 copies) CEJ55_00520 PF13599 Pentapeptide repeats (9 copies) CEJ55_00525 PF00999 Sodium/hydrogen exchanger family CEJ55_00530 PF00860 Permease family CEJ55_00550 PF00376 MerR family regulatory protein CEJ55_00550 PF09278 MerR, DNA binding CEJ55_00555 PF12833 Helix-turn-helix domain CEJ55_00560 PF00563 EAL domain CEJ55_00560 PF12792 CEJ55_00560 CEJ55_00570 PF15940 CEJ55_00570 CEJ55_00575 PF00436 Single-strand binding protein family CEJ55_00580 PF00005 ABC transporter CEJ55_00585 PF04237 YjbR CEJ55_00590 PF01894 Uncharacterised protein family UPF0047 CEJ55_00595 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CEJ55_00605 PF00155 Aminotransferase class I and II CEJ55_00610 PF00842 Alanine racemase, C-terminal domain CEJ55_00610 PF01168 Alanine racemase, N-terminal domain CEJ55_00615 PF00772 DnaB-like helicase N terminal domain CEJ55_00615 PF03796 DnaB-like helicase C terminal domain CEJ55_00620 PF00107 Zinc-binding dehydrogenase CEJ55_00620 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_00625 PF09583 CEJ55_00625 CEJ55_00630 PF01207 Dihydrouridine synthase (Dus) CEJ55_00645 PF01475 Ferric uptake regulator family CEJ55_00650 PF05532 CsbD-like CEJ55_00655 PF01554 MatE CEJ55_00660 PF00717 Peptidase S24-like CEJ55_00660 PF01726 LexA DNA binding domain CEJ55_00665 PF01219 Prokaryotic diacylglycerol kinase CEJ55_00670 PF01553 Acyltransferase CEJ55_00675 PF01040 UbiA prenyltransferase family CEJ55_00680 PF04345 Chorismate lyase CEJ55_00690 PF13599 Pentapeptide repeats (9 copies) CEJ55_00690 PF13981 SopA-like central domain CEJ55_00700 PF07148 CEJ55_00700 CEJ55_00705 PF02264 LamB porin CEJ55_00710 PF00005 ABC transporter CEJ55_00710 PF08402 TOBE domain CEJ55_00720 PF13416 Bacterial extracellular solute-binding protein CEJ55_00725 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_00725 PF14785 Maltose transport system permease protein MalF P2 domain CEJ55_00730 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_00735 PF00083 Sugar (and other) transporter CEJ55_00740 PF06146 CEJ55_00740 CEJ55_00745 PF17089 CEJ55_00745 CEJ55_00750 PF06082 CEJ55_00750 CEJ55_00755 PF06251 Capsule biosynthesis GfcC CEJ55_00760 PF11102 Group 4 capsule polysaccharide formation lipoprotein gfcB CEJ55_00765 PF11106 CEJ55_00765 CEJ55_00770 PF00342 Phosphoglucose isomerase CEJ55_00785 PF00696 Amino acid kinase family CEJ55_00785 PF01842 ACT domain CEJ55_00790 PF06414 Zeta toxin CEJ55_00795 PF10127 CEJ55_00795 CEJ55_00800 PF01145 SPFH domain / Band 7 family CEJ55_00805 PF11656 CEJ55_00805 CEJ55_00810 PF00849 RNA pseudouridylate synthase CEJ55_00810 PF01479 S4 domain CEJ55_00815 PF03575 Peptidase family S51 CEJ55_00820 PF02690 CEJ55_00820 CEJ55_00825 PF00809 Pterin binding enzyme CEJ55_00825 PF02310 B12 binding domain CEJ55_00825 PF02574 Homocysteine S-methyltransferase CEJ55_00825 PF02607 B12 binding domain CEJ55_00825 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEJ55_00830 PF01614 Bacterial transcriptional regulator CEJ55_00830 PF09339 IclR helix-turn-helix domain CEJ55_00835 PF07906 CEJ55_00835 CEJ55_00840 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CEJ55_00845 PF00463 Isocitrate lyase family CEJ55_00850 PF01274 Malate synthase CEJ55_00855 PF04204 Homoserine O-succinyltransferase CEJ55_00860 PF13673 Acetyltransferase (GNAT) domain CEJ55_00890 PF01808 AICARFT/IMPCHase bienzyme CEJ55_00890 PF02142 MGS-like domain CEJ55_00895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CEJ55_00895 PF02843 Phosphoribosylglycinamide synthetase, C domain CEJ55_00895 PF02844 Phosphoribosylglycinamide synthetase, N domain CEJ55_00900 PF00072 Response regulator receiver domain CEJ55_00900 PF00158 Sigma-54 interaction domain CEJ55_00900 PF02954 Bacterial regulatory protein, Fis family CEJ55_00905 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_00915 PF13801 Heavy-metal resistance CEJ55_00920 PF07356 CEJ55_00920 CEJ55_00920 PF08139 CEJ55_00920 CEJ55_00925 PF00216 Bacterial DNA-binding protein CEJ55_00930 PF04222 Protein of unknown function (DUF416) CEJ55_00935 PF04493 Endonuclease V CEJ55_00940 PF01208 Uroporphyrinogen decarboxylase (URO-D) CEJ55_00945 PF00293 NUDIX domain CEJ55_00945 PF09297 NADH pyrophosphatase zinc ribbon domain CEJ55_00950 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CEJ55_00955 PF01964 ThiC family CEJ55_00955 PF13667 ThiC-associated domain CEJ55_00960 PF02581 Thiamine monophosphate synthase/TENI CEJ55_00965 PF00899 ThiF family CEJ55_00970 PF02597 ThiS family CEJ55_00975 PF05690 Thiazole biosynthesis protein ThiG CEJ55_00980 PF04055 Radical SAM superfamily CEJ55_00980 PF06968 Biotin and Thiamin Synthesis associated domain CEJ55_00990 PF00623 RNA polymerase Rpb1, domain 2 CEJ55_00990 PF04983 RNA polymerase Rpb1, domain 3 CEJ55_00990 PF04997 RNA polymerase Rpb1, domain 1 CEJ55_00990 PF04998 RNA polymerase Rpb1, domain 5 CEJ55_00990 PF05000 RNA polymerase Rpb1, domain 4 CEJ55_00995 PF00562 RNA polymerase Rpb2, domain 6 CEJ55_00995 PF04560 RNA polymerase Rpb2, domain 7 CEJ55_00995 PF04561 RNA polymerase Rpb2, domain 2 CEJ55_00995 PF04563 RNA polymerase beta subunit CEJ55_00995 PF04565 RNA polymerase Rpb2, domain 3 CEJ55_00995 PF10385 RNA polymerase beta subunit external 1 domain CEJ55_01000 PF00542 Ribosomal protein L7/L12 C-terminal domain CEJ55_01000 PF16320 CEJ55_01000 CEJ55_01005 PF00466 Ribosomal protein L10 CEJ55_01015 PF00687 Ribosomal protein L1p/L10e family CEJ55_01020 PF00298 Ribosomal protein L11, RNA binding domain CEJ55_01020 PF03946 Ribosomal protein L11, N-terminal domain CEJ55_01025 PF00467 KOW motif CEJ55_01025 PF02357 Transcription termination factor nusG CEJ55_01030 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CEJ55_01035 PF00009 Elongation factor Tu GTP binding domain CEJ55_01035 PF03143 Elongation factor Tu C-terminal domain CEJ55_01035 PF03144 Elongation factor Tu domain 2 CEJ55_01070 PF00485 Phosphoribulokinase / Uridine kinase family CEJ55_01075 PF02237 Biotin protein ligase C terminal domain CEJ55_01075 PF03099 Biotin/lipoate A/B protein ligase family CEJ55_01075 PF08279 HTH domain CEJ55_01080 PF01565 FAD binding domain CEJ55_01080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CEJ55_01105 PF01177 Asp/Glu/Hydantoin racemase CEJ55_01110 PF00593 TonB dependent receptor CEJ55_01110 PF07715 TonB-dependent Receptor Plug Domain CEJ55_01115 PF05958 tRNA (Uracil-5-)-methyltransferase CEJ55_01120 PF07226 CEJ55_01120 CEJ55_01125 PF00440 Bacterial regulatory proteins, tetR family CEJ55_01135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ55_01135 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_01140 PF03466 LysR substrate binding domain CEJ55_01145 PF07690 Major Facilitator Superfamily CEJ55_01150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEJ55_01150 PF13378 Enolase C-terminal domain-like CEJ55_01155 PF00206 Lyase CEJ55_01155 PF14698 Argininosuccinate lyase C-terminal CEJ55_01160 PF00696 Amino acid kinase family CEJ55_01165 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ55_01165 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEJ55_01170 PF01546 Peptidase family M20/M25/M40 CEJ55_01170 PF07687 Peptidase dimerisation domain CEJ55_01175 PF00311 Phosphoenolpyruvate carboxylase CEJ55_01180 PF00884 Sulfatase CEJ55_01180 PF08019 CEJ55_01180 CEJ55_01185 PF12833 Helix-turn-helix domain CEJ55_01190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_01195 PF04055 Radical SAM superfamily CEJ55_01195 PF13353 4Fe-4S single cluster domain CEJ55_01200 PF01228 Glycine radical CEJ55_01200 PF02901 Pyruvate formate lyase CEJ55_01205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_01215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_01215 PF00381 PTS HPr component phosphorylation site CEJ55_01215 PF00391 PEP-utilising enzyme, mobile domain CEJ55_01215 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ55_01215 PF05524 PEP-utilising enzyme, N-terminal CEJ55_01220 PF00923 Transaldolase CEJ55_01225 PF00465 Iron-containing alcohol dehydrogenase CEJ55_01230 PF06940 CEJ55_01230 CEJ55_01235 PF00892 EamA-like transporter family CEJ55_01240 PF00141 Peroxidase CEJ55_01245 PF02219 Methylenetetrahydrofolate reductase CEJ55_01250 PF00696 Amino acid kinase family CEJ55_01250 PF00742 Homoserine dehydrogenase CEJ55_01250 PF03447 Homoserine dehydrogenase, NAD binding domain CEJ55_01255 PF01053 Cys/Met metabolism PLP-dependent enzyme CEJ55_01265 PF01340 Met Apo-repressor, MetJ CEJ55_01295 PF01197 Ribosomal protein L31 CEJ55_01300 PF00270 DEAD/DEAH box helicase CEJ55_01300 PF00271 Helicase conserved C-terminal domain CEJ55_01305 PF00356 Bacterial regulatory proteins, lacI family CEJ55_01305 PF13377 Periplasmic binding protein-like domain CEJ55_01310 PF05036 Sporulation related domain CEJ55_01315 PF00227 Proteasome subunit CEJ55_01320 PF00004 ATPase family associated with various cellular activities (AAA) CEJ55_01320 PF07724 AAA domain (Cdc48 subfamily) CEJ55_01320 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ55_01325 PF01040 UbiA prenyltransferase family CEJ55_01330 PF03737 Demethylmenaquinone methyltransferase CEJ55_01335 PF06005 Protein of unknown function (DUF904) CEJ55_01340 PF00230 Major intrinsic protein CEJ55_01345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ55_01345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_01350 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CEJ55_01355 PF00175 Oxidoreductase NAD-binding domain CEJ55_01355 PF00970 Oxidoreductase FAD-binding domain CEJ55_01360 PF00582 Universal stress protein family CEJ55_01365 PF04175 Protein of unknown function (DUF406) CEJ55_01370 PF05656 CEJ55_01370 CEJ55_01375 PF07305 CEJ55_01375 CEJ55_01385 PF00121 Triosephosphate isomerase CEJ55_01390 PF02611 CDP-diacylglycerol pyrophosphatase CEJ55_01395 PF13531 Bacterial extracellular solute-binding protein CEJ55_01400 PF00365 Phosphofructokinase CEJ55_01405 PF01545 Cation efflux family CEJ55_01405 PF16916 CEJ55_01405 CEJ55_01410 PF07813 LTXXQ motif family protein CEJ55_01415 PF00072 Response regulator receiver domain CEJ55_01415 PF00486 Transcriptional regulatory protein, C terminal CEJ55_01420 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_01420 PF00672 HAMP domain CEJ55_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_01420 PF16527 CEJ55_01420 CEJ55_01430 PF01548 CEJ55_01430 CEJ55_01430 PF02371 CEJ55_01430 CEJ55_01440 PF03473 MOSC domain CEJ55_01440 PF03475 3-alpha domain CEJ55_01445 PF03812 CEJ55_01445 CEJ55_01455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEJ55_01455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEJ55_01460 PF06379 CEJ55_01460 CEJ55_01465 PF02311 AraC-like ligand binding domain CEJ55_01465 PF12833 Helix-turn-helix domain CEJ55_01470 PF02311 AraC-like ligand binding domain CEJ55_01470 PF12833 Helix-turn-helix domain CEJ55_01475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ55_01475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_01480 PF06134 L-rhamnose isomerase (RhaA) CEJ55_01485 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ55_01490 PF05336 Domain of unknown function (DUF718) CEJ55_01495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_01500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_01500 PF02378 Phosphotransferase system, EIIC CEJ55_01505 PF05343 M42 glutamyl aminopeptidase CEJ55_01510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_01510 PF08279 HTH domain CEJ55_01515 PF12889 Protein of unknown function (DUF3829) CEJ55_01520 PF02634 FdhD/NarQ family CEJ55_01530 PF00384 Molybdopterin oxidoreductase CEJ55_01530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ55_01535 PF00384 Molybdopterin oxidoreductase CEJ55_01535 PF01568 Molydopterin dinucleotide binding domain CEJ55_01540 PF09163 Formate dehydrogenase N, transmembrane CEJ55_01540 PF13247 4Fe-4S dicluster domain CEJ55_01545 PF01292 Prokaryotic cytochrome b561 CEJ55_01550 PF04216 Protein involved in formate dehydrogenase formation CEJ55_01560 PF01402 Ribbon-helix-helix protein, copG family CEJ55_01570 PF13560 Helix-turn-helix domain CEJ55_01580 PF07859 alpha/beta hydrolase fold CEJ55_01585 PF00583 Acetyltransferase (GNAT) family CEJ55_01585 PF09500 Putative thioesterase (yiiD_Cterm) CEJ55_01590 PF02580 D-Tyr-tRNA(Tyr) deacylase CEJ55_01595 PF03631 CEJ55_01595 CEJ55_01600 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_01605 PF00455 CEJ55_01605 CEJ55_01605 PF08220 DeoR-like helix-turn-helix domain CEJ55_01610 PF00294 pfkB family carbohydrate kinase CEJ55_01615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEJ55_01615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEJ55_01620 PF01791 DeoC/LacD family aldolase CEJ55_01625 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) CEJ55_01630 PF01263 Aldose 1-epimerase CEJ55_01635 PF01055 Glycosyl hydrolases family 31 CEJ55_01640 PF13347 MFS/sugar transport protein CEJ55_01645 PF13347 MFS/sugar transport protein CEJ55_01650 PF06178 Oligogalacturonate-specific porin protein (KdgM) CEJ55_01655 PF07690 Major Facilitator Superfamily CEJ55_01660 PF01261 Xylose isomerase-like TIM barrel CEJ55_01665 PF00392 Bacterial regulatory proteins, gntR family CEJ55_01665 PF07702 UTRA domain CEJ55_01670 PF00009 Elongation factor Tu GTP binding domain CEJ55_01670 PF00679 Elongation factor G C-terminus CEJ55_01670 PF03144 Elongation factor Tu domain 2 CEJ55_01680 PF00120 Glutamine synthetase, catalytic domain CEJ55_01680 PF03951 Glutamine synthetase, beta-Grasp domain CEJ55_01685 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_01685 PF00989 PAS fold CEJ55_01685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_01690 PF00072 Response regulator receiver domain CEJ55_01690 PF00158 Sigma-54 interaction domain CEJ55_01690 PF02954 Bacterial regulatory protein, Fis family CEJ55_01700 PF04055 Radical SAM superfamily CEJ55_01700 PF06969 HemN C-terminal domain CEJ55_01705 PF04220 CEJ55_01705 CEJ55_01715 PF01926 50S ribosome-binding GTPase CEJ55_01720 PF00476 DNA polymerase family A CEJ55_01720 PF01367 5'-3' exonuclease, C-terminal SAM fold CEJ55_01720 PF01612 3'-5' exonuclease CEJ55_01720 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEJ55_01730 PF01553 Acyltransferase CEJ55_01735 PF06097 CEJ55_01735 CEJ55_01740 PF01323 DSBA-like thioredoxin domain CEJ55_01745 PF01636 Phosphotransferase enzyme family CEJ55_01750 PF06288 Protein of unknown function (DUF1040) CEJ55_01755 PF12804 MobA-like NTP transferase domain CEJ55_01760 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEJ55_01790 PF12724 Flavodoxin domain CEJ55_01795 PF02386 Cation transport protein CEJ55_01800 PF01205 Uncharacterized protein family UPF0029 CEJ55_01800 PF09186 Domain of unknown function (DUF1949) CEJ55_01805 PF00557 Metallopeptidase family M24 CEJ55_01810 PF00378 Enoyl-CoA hydratase/isomerase family CEJ55_01810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEJ55_01810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEJ55_01815 PF00108 Thiolase, N-terminal domain CEJ55_01815 PF02803 Thiolase, C-terminal domain CEJ55_01820 PF00175 Oxidoreductase NAD-binding domain CEJ55_01820 PF00970 Oxidoreductase FAD-binding domain CEJ55_01825 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CEJ55_01830 PF02357 Transcription termination factor nusG CEJ55_01835 PF01026 TatD related DNase CEJ55_01840 PF00902 Sec-independent protein translocase protein (TatC) CEJ55_01850 PF02416 mttA/Hcf106 family CEJ55_01855 PF03109 CEJ55_01855 CEJ55_01860 PF02036 SCP-2 sterol transfer family CEJ55_01865 PF01209 ubiE/COQ5 methyltransferase family CEJ55_01870 PF02646 CEJ55_01870 CEJ55_01875 PF01048 Phosphorylase superfamily CEJ55_01880 PF01738 Dienelactone hydrolase family CEJ55_01885 PF01717 Cobalamin-independent synthase, Catalytic domain CEJ55_01885 PF08267 Cobalamin-independent synthase, N-terminal domain CEJ55_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_01890 PF03466 LysR substrate binding domain CEJ55_01895 PF00892 EamA-like transporter family CEJ55_01900 PF08282 haloacid dehalogenase-like hydrolase CEJ55_01905 PF12146 Putative lysophospholipase CEJ55_01910 PF01810 CEJ55_01910 CEJ55_01915 PF01810 CEJ55_01915 CEJ55_01920 PF00270 DEAD/DEAH box helicase CEJ55_01920 PF00271 Helicase conserved C-terminal domain CEJ55_01920 PF00570 HRDC domain CEJ55_01920 PF09382 RQC domain CEJ55_01920 PF16124 CEJ55_01920 CEJ55_01925 PF02253 Phospholipase A1 CEJ55_01930 PF03061 Thioesterase superfamily CEJ55_01935 PF00892 EamA-like transporter family CEJ55_01950 PF01544 CorA-like Mg2+ transporter protein CEJ55_01955 PF11692 CEJ55_01955 CEJ55_01960 PF06092 CEJ55_01960 CEJ55_01965 PF01544 CorA-like Mg2+ transporter protein CEJ55_01970 PF09992 Predicted periplasmic protein (DUF2233) CEJ55_01975 PF00580 UvrD/REP helicase N-terminal domain CEJ55_01975 PF13361 UvrD-like helicase C-terminal domain CEJ55_01980 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_01985 PF00589 Phage integrase family CEJ55_01985 PF02899 Phage integrase, N-terminal SAM-like domain CEJ55_01990 PF04340 Protein of unknown function, DUF484 CEJ55_01995 PF01678 Diaminopimelate epimerase CEJ55_02000 PF13627 CEJ55_02000 CEJ55_02005 PF11745 CEJ55_02005 CEJ55_02020 PF01491 Frataxin-like domain CEJ55_02025 PF01295 CEJ55_02025 CEJ55_02025 PF12633 CEJ55_02025 CEJ55_02035 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CEJ55_02035 PF03900 Porphobilinogen deaminase, C-terminal domain CEJ55_02040 PF02602 Uroporphyrinogen-III synthase HemD CEJ55_02045 PF04375 CEJ55_02045 CEJ55_02050 PF07219 CEJ55_02050 CEJ55_02050 PF07719 Tetratricopeptide repeat CEJ55_02055 PF04055 Radical SAM superfamily CEJ55_02055 PF13186 Iron-sulfur cluster-binding domain CEJ55_02055 PF13353 4Fe-4S single cluster domain CEJ55_02080 PF00324 Amino acid permease CEJ55_02085 PF03808 CEJ55_02085 CEJ55_02090 PF06899 CEJ55_02090 CEJ55_02095 PF07429 CEJ55_02095 CEJ55_02100 PF01943 CEJ55_02100 CEJ55_02105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEJ55_02115 PF00483 Nucleotidyl transferase CEJ55_02120 PF16363 CEJ55_02120 CEJ55_02125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEJ55_02125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEJ55_02125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEJ55_02130 PF02350 UDP-N-acetylglucosamine 2-epimerase CEJ55_02135 PF02706 Chain length determinant protein CEJ55_02140 PF00953 Glycosyl transferase family 4 CEJ55_02150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ55_02150 PF07497 Rho termination factor, RNA-binding domain CEJ55_02150 PF07498 Rho termination factor, N-terminal domain CEJ55_02160 PF00085 Thioredoxin CEJ55_02165 PF00270 DEAD/DEAH box helicase CEJ55_02165 PF00271 Helicase conserved C-terminal domain CEJ55_02175 PF02541 Ppx/GppA phosphatase family CEJ55_02180 PF00580 UvrD/REP helicase N-terminal domain CEJ55_02180 PF13361 UvrD-like helicase C-terminal domain CEJ55_02185 PF02452 PemK-like protein CEJ55_02190 PF13616 PPIC-type PPIASE domain CEJ55_02195 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CEJ55_02195 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CEJ55_02200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_02200 PF03466 LysR substrate binding domain CEJ55_02205 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_02205 PF00585 C-terminal regulatory domain of Threonine dehydratase CEJ55_02210 PF00920 Dehydratase family CEJ55_02215 PF01063 Aminotransferase class IV CEJ55_02220 PF13710 ACT domain CEJ55_02225 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ55_02225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_02225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ55_02230 PF08046 CEJ55_02230 CEJ55_02235 PF01078 Magnesium chelatase, subunit ChlI CEJ55_02235 PF13335 CEJ55_02235 CEJ55_02235 PF13541 Subunit ChlI of Mg-chelatase CEJ55_02240 PF04219 CEJ55_02240 CEJ55_02245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_02245 PF03466 LysR substrate binding domain CEJ55_02280 PF00392 Bacterial regulatory proteins, gntR family CEJ55_02280 PF07729 FCD domain CEJ55_02285 PF07690 Major Facilitator Superfamily CEJ55_02290 PF00356 Bacterial regulatory proteins, lacI family CEJ55_02290 PF13377 Periplasmic binding protein-like domain CEJ55_02295 PF00294 pfkB family carbohydrate kinase CEJ55_02300 PF13407 Periplasmic binding protein domain CEJ55_02305 PF02653 CEJ55_02305 CEJ55_02310 PF00005 ABC transporter CEJ55_02315 PF05025 RbsD / FucU transport protein family CEJ55_02320 PF02705 CEJ55_02320 CEJ55_02325 PF07728 AAA domain (dynein-related subfamily) CEJ55_02325 PF12592 Protein of unknown function (DUF3763) CEJ55_02330 PF05762 VWA domain containing CoxE-like protein CEJ55_02335 PF03590 Aspartate-ammonia ligase CEJ55_02340 PF01037 AsnC family CEJ55_02340 PF13412 Winged helix-turn-helix DNA-binding CEJ55_02345 PF00258 Flavodoxin CEJ55_02350 PF01134 Glucose inhibited division protein A CEJ55_02350 PF13932 GidA associated domain 3 CEJ55_02355 PF02527 rRNA small subunit methyltransferase G CEJ55_02360 PF03899 CEJ55_02360 CEJ55_02365 PF00119 ATP synthase A chain CEJ55_02370 PF00137 ATP synthase subunit C CEJ55_02375 PF00430 ATP synthase B/B' CF(0) CEJ55_02380 PF00213 ATP synthase delta (OSCP) subunit CEJ55_02385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ55_02385 PF00306 ATP synthase alpha/beta chain, C terminal domain CEJ55_02385 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEJ55_02390 PF00231 ATP synthase CEJ55_02395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ55_02395 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEJ55_02400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CEJ55_02400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEJ55_02410 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_02410 PF12804 MobA-like NTP transferase domain CEJ55_02415 PF01380 SIS domain CEJ55_02415 PF13522 Glutamine amidotransferase domain CEJ55_02420 PF00419 Fimbrial protein CEJ55_02425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_02425 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_02430 PF00577 Outer membrane usher protein CEJ55_02430 PF13953 PapC C-terminal domain CEJ55_02430 PF13954 PapC N-terminal domain CEJ55_02435 PF00419 Fimbrial protein CEJ55_02440 PF12849 PBP superfamily domain CEJ55_02445 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_02450 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_02455 PF00005 ABC transporter CEJ55_02460 PF01895 PhoU domain CEJ55_02465 PF00874 PRD domain CEJ55_02465 PF03123 CAT RNA binding domain CEJ55_02470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEJ55_02470 PF00367 phosphotransferase system, EIIB CEJ55_02470 PF02378 Phosphotransferase system, EIIC CEJ55_02475 PF00232 Glycosyl hydrolase family 1 CEJ55_02480 PF02264 LamB porin CEJ55_02480 PF11471 CEJ55_02480 CEJ55_02485 PF00756 Putative esterase CEJ55_02485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEJ55_02490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEJ55_02495 PF03691 CEJ55_02495 CEJ55_02505 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_02510 PF00860 Permease family CEJ55_02515 PF03358 NADPH-dependent FMN reductase CEJ55_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_02525 PF03466 LysR substrate binding domain CEJ55_02530 PF07690 Major Facilitator Superfamily CEJ55_02535 PF03222 Tryptophan/tyrosine permease family CEJ55_02540 PF01212 Beta-eliminating lyase CEJ55_02545 PF08053 CEJ55_02545 CEJ55_02550 PF01926 50S ribosome-binding GTPase CEJ55_02550 PF10396 GTP-binding protein TrmE N-terminus CEJ55_02550 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CEJ55_02555 PF02096 60Kd inner membrane protein CEJ55_02555 PF14849 YidC periplasmic domain CEJ55_02560 PF01809 CEJ55_02560 CEJ55_02565 PF00825 Ribonuclease P CEJ55_02570 PF00468 Ribosomal protein L34 CEJ55_02580 PF00308 Bacterial dnaA protein CEJ55_02580 PF08299 Bacterial dnaA protein helix-turn-helix CEJ55_02580 PF11638 DnaA N-terminal domain CEJ55_02585 PF00712 DNA polymerase III beta subunit, N-terminal domain CEJ55_02585 PF02767 DNA polymerase III beta subunit, central domain CEJ55_02585 PF02768 DNA polymerase III beta subunit, C-terminal domain CEJ55_02590 PF02463 RecF/RecN/SMC N terminal domain CEJ55_02595 PF00204 DNA gyrase B CEJ55_02595 PF00986 DNA gyrase B subunit, carboxyl terminus CEJ55_02595 PF01751 Toprim domain CEJ55_02595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_02600 PF06078 Bacterial protein of unknown function (DUF937) CEJ55_02605 PF08282 haloacid dehalogenase-like hydrolase CEJ55_02615 PF00392 Bacterial regulatory proteins, gntR family CEJ55_02615 PF07729 FCD domain CEJ55_02620 PF05035 2-keto-3-deoxy-galactonokinase CEJ55_02625 PF01081 KDPG and KHG aldolase CEJ55_02630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEJ55_02630 PF13378 Enolase C-terminal domain-like CEJ55_02635 PF07690 Major Facilitator Superfamily CEJ55_02640 PF01494 FAD binding domain CEJ55_02645 PF07676 WD40-like Beta Propeller Repeat CEJ55_02645 PF12566 CEJ55_02645 CEJ55_02650 PF07119 CEJ55_02650 CEJ55_02655 PF00011 Hsp20/alpha crystallin family CEJ55_02660 PF00011 Hsp20/alpha crystallin family CEJ55_02665 PF02080 TrkA-C domain CEJ55_02665 PF06826 CEJ55_02665 CEJ55_02670 PF00392 Bacterial regulatory proteins, gntR family CEJ55_02670 PF07702 UTRA domain CEJ55_02675 PF00367 phosphotransferase system, EIIB CEJ55_02675 PF02378 Phosphotransferase system, EIIC CEJ55_02680 PF02056 Family 4 glycosyl hydrolase CEJ55_02690 PF02311 AraC-like ligand binding domain CEJ55_02690 PF12833 Helix-turn-helix domain CEJ55_02695 PF00474 Sodium:solute symporter family CEJ55_02700 PF00884 Sulfatase CEJ55_02700 PF16347 CEJ55_02700 CEJ55_02710 PF02656 CEJ55_02710 CEJ55_02715 PF02656 CEJ55_02715 CEJ55_02725 PF07690 Major Facilitator Superfamily CEJ55_02735 PF13939 CEJ55_02735 CEJ55_02755 PF08049 CEJ55_02755 CEJ55_02760 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ55_02760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_02760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ55_02765 PF01842 ACT domain CEJ55_02770 PF00072 Response regulator receiver domain CEJ55_02770 PF00196 Bacterial regulatory proteins, luxR family CEJ55_02775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_02775 PF05231 CEJ55_02775 CEJ55_02775 PF07730 Histidine kinase CEJ55_02780 PF07690 Major Facilitator Superfamily CEJ55_02785 PF07690 Major Facilitator Superfamily CEJ55_02790 PF01979 Amidohydrolase family CEJ55_02790 PF13382 Adenine deaminase C-terminal domain CEJ55_02795 PF00860 Permease family CEJ55_02800 PF06711 CEJ55_02800 CEJ55_02810 PF07690 Major Facilitator Superfamily CEJ55_02825 PF03180 NLPA lipoprotein CEJ55_02830 PF00892 EamA-like transporter family CEJ55_02835 PF07690 Major Facilitator Superfamily CEJ55_02850 PF13347 MFS/sugar transport protein CEJ55_02855 PF01055 Glycosyl hydrolases family 31 CEJ55_02855 PF13802 Galactose mutarotase-like CEJ55_02860 PF05170 CEJ55_02860 CEJ55_02865 PF00860 Permease family CEJ55_02870 PF03616 CEJ55_02870 CEJ55_02875 PF00270 DEAD/DEAH box helicase CEJ55_02875 PF00271 Helicase conserved C-terminal domain CEJ55_02875 PF17191 CEJ55_02875 CEJ55_02880 PF00588 SpoU rRNA Methylase family CEJ55_02880 PF12105 SpoU, rRNA methylase, C-terminal CEJ55_02885 PF02824 TGS domain CEJ55_02885 PF04607 Region found in RelA / SpoT proteins CEJ55_02885 PF13291 ACT domain CEJ55_02885 PF13328 HD domain CEJ55_02890 PF01192 RNA polymerase Rpb6 CEJ55_02895 PF00625 Guanylate kinase CEJ55_02900 PF01653 NAD-dependent DNA ligase adenylation domain CEJ55_02900 PF03120 NAD-dependent DNA ligase OB-fold domain CEJ55_02905 PF03458 CEJ55_02905 CEJ55_02910 PF02498 CEJ55_02910 CEJ55_02915 PF03755 CEJ55_02915 CEJ55_02915 PF08340 CEJ55_02915 CEJ55_02925 PF01138 3' exoribonuclease family, domain 1 CEJ55_02925 PF03725 3' exoribonuclease family, domain 2 CEJ55_02930 PF00156 Phosphoribosyl transferase domain CEJ55_02935 PF00440 Bacterial regulatory proteins, tetR family CEJ55_02940 PF00692 dUTPase CEJ55_02945 PF02441 Flavoprotein CEJ55_02945 PF04127 DNA / pantothenate metabolism flavoprotein CEJ55_02950 PF04002 RadC-like JAB domain CEJ55_02955 PF00830 Ribosomal L28 family CEJ55_02960 PF00471 Ribosomal protein L33 CEJ55_02965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEJ55_02965 PF06827 Zinc finger found in FPG and IleRS CEJ55_02965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEJ55_02970 PF01467 Cytidylyltransferase CEJ55_02975 PF00534 Glycosyl transferases group 1 CEJ55_02975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CEJ55_02980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ55_02985 PF00534 Glycosyl transferases group 1 CEJ55_02985 PF13439 Glycosyltransferase Family 4 CEJ55_02990 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family CEJ55_02995 PF01501 Glycosyl transferase family 8 CEJ55_02995 PF08437 CEJ55_02995 CEJ55_03000 PF01501 Glycosyl transferase family 8 CEJ55_03000 PF08437 CEJ55_03000 CEJ55_03005 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CEJ55_03010 PF01501 Glycosyl transferase family 8 CEJ55_03010 PF08437 CEJ55_03010 CEJ55_03015 PF00535 Glycosyl transferase family 2 CEJ55_03020 PF04932 CEJ55_03020 CEJ55_03025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ55_03030 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ55_03035 PF01370 NAD dependent epimerase/dehydratase family CEJ55_03040 PF00155 Aminotransferase class I and II CEJ55_03045 PF00107 Zinc-binding dehydrogenase CEJ55_03045 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_03050 PF00535 Glycosyl transferase family 2 CEJ55_03055 PF04748 Divergent polysaccharide deacetylase CEJ55_03060 PF01551 Peptidase family M23 CEJ55_03065 PF01676 Metalloenzyme superfamily CEJ55_03065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CEJ55_03075 PF00581 Rhodanese-like domain CEJ55_03080 PF00462 Glutaredoxin CEJ55_03085 PF02556 Preprotein translocase subunit SecB CEJ55_03090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEJ55_03090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEJ55_03095 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_03095 PF06426 Serine acetyltransferase, N-terminal CEJ55_03100 PF00588 SpoU rRNA Methylase family CEJ55_03105 PF01070 FMN-dependent dehydrogenase CEJ55_03110 PF00392 Bacterial regulatory proteins, gntR family CEJ55_03110 PF07729 FCD domain CEJ55_03115 PF02652 CEJ55_03115 CEJ55_03120 PF03895 YadA-like C-terminal region CEJ55_03120 PF05658 Head domain of trimeric autotransporter adhesin CEJ55_03120 PF05662 Coiled stalk of trimeric autotransporter adhesin CEJ55_03120 PF13018 CEJ55_03120 CEJ55_03125 PF11622 Protein of unknown function (DUF3251) CEJ55_03135 PF10928 Protein of unknown function (DUF2810) CEJ55_03145 PF05068 Mannitol repressor CEJ55_03150 PF01232 Mannitol dehydrogenase Rossmann domain CEJ55_03150 PF08125 Mannitol dehydrogenase C-terminal domain CEJ55_03155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_03155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_03155 PF02378 Phosphotransferase system, EIIC CEJ55_03160 PF11742 CEJ55_03160 CEJ55_03165 PF00529 HlyD family secretion protein CEJ55_03165 PF16576 CEJ55_03165 CEJ55_03170 PF15596 CEJ55_03170 CEJ55_03195 PF03527 CEJ55_03195 CEJ55_03205 PF15631 CEJ55_03205 CEJ55_03210 PF03527 CEJ55_03210 CEJ55_03210 PF05593 CEJ55_03210 CEJ55_03210 PF14220 CEJ55_03210 CEJ55_03215 PF00043 Glutathione S-transferase, C-terminal domain CEJ55_03215 PF13417 Glutathione S-transferase, N-terminal domain CEJ55_03220 PF03841 L-seryl-tRNA selenium transferase CEJ55_03220 PF12390 CEJ55_03220 CEJ55_03225 PF00009 Elongation factor Tu GTP binding domain CEJ55_03225 PF03144 Elongation factor Tu domain 2 CEJ55_03225 PF09106 Elongation factor SelB, winged helix CEJ55_03225 PF09107 Elongation factor SelB, winged helix CEJ55_03230 PF00465 Iron-containing alcohol dehydrogenase CEJ55_03235 PF00171 Aldehyde dehydrogenase family CEJ55_03245 PF11742 CEJ55_03245 CEJ55_03250 PF00529 HlyD family secretion protein CEJ55_03250 PF16576 CEJ55_03250 CEJ55_03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_03255 PF03466 LysR substrate binding domain CEJ55_03260 PF06629 CEJ55_03260 CEJ55_03270 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ55_03275 PF01261 Xylose isomerase-like TIM barrel CEJ55_03280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEJ55_03285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ55_03285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_03290 PF03480 Bacterial extracellular solute-binding protein, family 7 CEJ55_03295 PF06808 CEJ55_03295 CEJ55_03300 PF04290 CEJ55_03300 CEJ55_03305 PF04074 Domain of unknown function (DUF386) CEJ55_03310 PF02615 Malate/L-lactate dehydrogenase CEJ55_03315 PF01614 Bacterial transcriptional regulator CEJ55_03315 PF09339 IclR helix-turn-helix domain CEJ55_03320 PF13247 4Fe-4S dicluster domain CEJ55_03325 PF00155 Aminotransferase class I and II CEJ55_03330 PF00128 Alpha amylase, catalytic domain CEJ55_03335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CEJ55_03340 PF12833 Helix-turn-helix domain CEJ55_03340 PF13377 Periplasmic binding protein-like domain CEJ55_03345 PF02653 CEJ55_03345 CEJ55_03350 PF00005 ABC transporter CEJ55_03355 PF13407 Periplasmic binding protein domain CEJ55_03365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ55_03365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_03370 PF05360 CEJ55_03370 CEJ55_03375 PF05360 CEJ55_03375 CEJ55_03380 PF01757 CEJ55_03380 CEJ55_03385 PF13983 CEJ55_03385 CEJ55_03390 PF02091 Glycyl-tRNA synthetase alpha subunit CEJ55_03395 PF02092 CEJ55_03395 CEJ55_03395 PF05746 DALR anticodon binding domain CEJ55_03400 PF01848 CEJ55_03400 CEJ55_03405 PF00313 'Cold-shock' DNA-binding domain CEJ55_03410 PF01381 Helix-turn-helix CEJ55_03415 PF11254 CEJ55_03415 CEJ55_03420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ55_03420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ55_03425 PF00691 OmpA family CEJ55_03425 PF13488 CEJ55_03425 CEJ55_03430 PF00384 Molybdopterin oxidoreductase CEJ55_03430 PF01568 Molydopterin dinucleotide binding domain CEJ55_03435 PF13673 Acetyltransferase (GNAT) domain CEJ55_03440 PF03352 Methyladenine glycosylase CEJ55_03445 PF03797 Autotransporter beta-domain CEJ55_03455 PF07690 Major Facilitator Superfamily CEJ55_03460 PF00419 Fimbrial protein CEJ55_03465 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_03465 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_03470 PF00577 Outer membrane usher protein CEJ55_03470 PF13953 PapC C-terminal domain CEJ55_03470 PF13954 PapC N-terminal domain CEJ55_03475 PF00419 Fimbrial protein CEJ55_03480 PF00419 Fimbrial protein CEJ55_03485 PF00884 Sulfatase CEJ55_03485 PF08019 CEJ55_03485 CEJ55_03505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_03515 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_03520 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_03520 PF12911 CEJ55_03520 CEJ55_03525 PF00005 ABC transporter CEJ55_03525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_03530 PF00005 ABC transporter CEJ55_03530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_03535 PF03222 Tryptophan/tyrosine permease family CEJ55_03550 PF13940 CEJ55_03550 CEJ55_03560 PF13940 CEJ55_03560 CEJ55_03570 PF13940 CEJ55_03570 CEJ55_03575 PF11658 CEJ55_03575 CEJ55_03580 PF11120 CEJ55_03580 CEJ55_03585 PF10995 CEJ55_03585 CEJ55_03590 PF10945 CEJ55_03590 CEJ55_03595 PF06564 YhjQ protein CEJ55_03600 PF00535 Glycosyl transferase family 2 CEJ55_03600 PF03552 Cellulose synthase CEJ55_03600 PF07238 PilZ domain CEJ55_03605 PF03170 Bacterial cellulose synthase subunit CEJ55_03610 PF01270 Glycosyl hydrolases family 8 CEJ55_03615 PF05420 CEJ55_03615 CEJ55_03615 PF13432 Tetratricopeptide repeat CEJ55_03615 PF14559 Tetratricopeptide repeat CEJ55_03620 PF00563 EAL domain CEJ55_03620 PF00990 GGDEF domain CEJ55_03620 PF17154 CEJ55_03620 CEJ55_03630 PF00375 Sodium:dicarboxylate symporter family CEJ55_03640 PF00675 Insulinase (Peptidase family M16) CEJ55_03640 PF05193 Peptidase M16 inactive domain CEJ55_03645 PF00294 pfkB family carbohydrate kinase CEJ55_03655 PF00563 EAL domain CEJ55_03660 PF05170 CEJ55_03660 CEJ55_03665 PF00083 Sugar (and other) transporter CEJ55_03665 PF07690 Major Facilitator Superfamily CEJ55_03670 PF03631 CEJ55_03670 CEJ55_03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_03675 PF03466 LysR substrate binding domain CEJ55_03680 PF00196 Bacterial regulatory proteins, luxR family CEJ55_03685 PF01204 Trehalase CEJ55_03690 PF00034 Cytochrome c CEJ55_03690 PF03150 Di-haem cytochrome c peroxidase CEJ55_03690 PF14376 CEJ55_03690 CEJ55_03695 PF00282 Pyridoxal-dependent decarboxylase conserved domain CEJ55_03700 PF12833 Helix-turn-helix domain CEJ55_03705 PF12833 Helix-turn-helix domain CEJ55_03715 PF00873 AcrB/AcrD/AcrF family CEJ55_03720 PF00529 HlyD family secretion protein CEJ55_03720 PF16576 CEJ55_03720 CEJ55_03730 PF00196 Bacterial regulatory proteins, luxR family CEJ55_03735 PF03729 CEJ55_03735 CEJ55_03740 PF06411 HdeA/HdeB family CEJ55_03745 PF06411 HdeA/HdeB family CEJ55_03750 PF02308 CEJ55_03750 CEJ55_03755 PF00196 Bacterial regulatory proteins, luxR family CEJ55_03765 PF03843 CEJ55_03765 CEJ55_03775 PF03773 CEJ55_03775 CEJ55_03780 PF12840 Helix-turn-helix domain CEJ55_03785 PF03960 ArsC family CEJ55_03790 PF02040 CEJ55_03790 CEJ55_03795 PF01022 Bacterial regulatory protein, arsR family CEJ55_03810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ55_03810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_03815 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ CEJ55_03820 PF01432 Peptidase family M3 CEJ55_03825 PF04445 Putative SAM-dependent methyltransferase CEJ55_03830 PF00854 POT family CEJ55_03840 PF00582 Universal stress protein family CEJ55_03845 PF10625 CEJ55_03845 CEJ55_03850 PF01384 CEJ55_03850 CEJ55_03855 PF03486 HI0933-like protein CEJ55_03860 PF10951 CEJ55_03860 CEJ55_03870 PF13258 CEJ55_03870 CEJ55_03875 PF13258 CEJ55_03875 CEJ55_03880 PF13437 HlyD family secretion protein CEJ55_03880 PF13533 Biotin-lipoyl like CEJ55_03885 PF00005 ABC transporter CEJ55_03885 PF12698 ABC-2 family transporter protein CEJ55_03890 PF12698 ABC-2 family transporter protein CEJ55_03900 PF05534 CEJ55_03900 CEJ55_03905 PF01402 Ribbon-helix-helix protein, copG family CEJ55_03905 PF08753 NikR C terminal nickel binding domain CEJ55_03910 PF00005 ABC transporter CEJ55_03915 PF00005 ABC transporter CEJ55_03920 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_03925 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_03930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_03935 PF01648 4'-phosphopantetheinyl transferase superfamily CEJ55_03940 PF01594 CEJ55_03940 CEJ55_03945 PF07690 Major Facilitator Superfamily CEJ55_03950 PF08786 Domain of unknown function (DUF1795) CEJ55_03955 PF02592 CEJ55_03955 CEJ55_03960 PF01206 Sulfurtransferase TusA CEJ55_03965 PF00122 E1-E2 ATPase CEJ55_03965 PF00403 Heavy-metal-associated domain CEJ55_03965 PF00702 haloacid dehalogenase-like hydrolase CEJ55_03970 PF07947 CEJ55_03970 CEJ55_03975 PF10694 Protein of unknown function (DUF2500) CEJ55_03980 PF06611 CEJ55_03980 CEJ55_03985 PF03602 Conserved hypothetical protein 95 CEJ55_03990 PF00448 SRP54-type protein, GTPase domain CEJ55_03990 PF02881 SRP54-type protein, helical bundle domain CEJ55_03995 PF00005 ABC transporter CEJ55_04000 PF02687 CEJ55_04000 CEJ55_04005 PF04542 Sigma-70 region 2 CEJ55_04005 PF04545 Sigma-70, region 4 CEJ55_04010 PF13458 Periplasmic binding protein CEJ55_04015 PF12568 Acetyltransferase (GNAT) domain CEJ55_04020 PF15945 CEJ55_04020 CEJ55_04025 PF13458 Periplasmic binding protein CEJ55_04030 PF02653 CEJ55_04030 CEJ55_04035 PF02653 CEJ55_04035 CEJ55_04035 PF11862 CEJ55_04035 CEJ55_04040 PF00005 ABC transporter CEJ55_04040 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEJ55_04045 PF00005 ABC transporter CEJ55_04050 PF13416 Bacterial extracellular solute-binding protein CEJ55_04055 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_04060 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_04065 PF00005 ABC transporter CEJ55_04065 PF08402 TOBE domain CEJ55_04070 PF03009 Glycerophosphoryl diester phosphodiesterase family CEJ55_04075 PF10956 CEJ55_04075 CEJ55_04080 PF01019 Gamma-glutamyltranspeptidase CEJ55_04085 PF15567 CEJ55_04085 CEJ55_04100 PF05638 Protein of unknown function (DUF796) CEJ55_04100 PF12639 DNase/tRNase domain of colicin-like bacteriocin CEJ55_04105 PF00583 Acetyltransferase (GNAT) family CEJ55_04115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEJ55_04115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEJ55_04120 PF02678 Pirin CEJ55_04125 PF00356 Bacterial regulatory proteins, lacI family CEJ55_04125 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ55_04130 PF01202 Shikimate kinase CEJ55_04135 PF02447 CEJ55_04135 CEJ55_04140 PF00270 DEAD/DEAH box helicase CEJ55_04140 PF00271 Helicase conserved C-terminal domain CEJ55_04145 PF02481 DNA recombination-mediator protein A CEJ55_04150 PF01914 CEJ55_04150 CEJ55_04155 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ55_04155 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEJ55_04160 PF00128 Alpha amylase, catalytic domain CEJ55_04160 PF02806 Alpha amylase, C-terminal all-beta domain CEJ55_04160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEJ55_04165 PF00128 Alpha amylase, catalytic domain CEJ55_04165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEJ55_04170 PF00483 Nucleotidyl transferase CEJ55_04175 PF00534 Glycosyl transferases group 1 CEJ55_04175 PF08323 Starch synthase catalytic domain CEJ55_04180 PF00343 Carbohydrate phosphorylase CEJ55_04190 PF12849 PBP superfamily domain CEJ55_04210 PF01266 FAD dependent oxidoreductase CEJ55_04210 PF16901 CEJ55_04210 CEJ55_04215 PF00581 Rhodanese-like domain CEJ55_04220 PF01694 Rhomboid family CEJ55_04220 PF12122 Protein of unknown function (DUF3582) CEJ55_04225 PF00455 CEJ55_04225 CEJ55_04225 PF08220 DeoR-like helix-turn-helix domain CEJ55_04230 PF00158 Sigma-54 interaction domain CEJ55_04230 PF06956 CEJ55_04230 CEJ55_04235 PF01139 tRNA-splicing ligase RtcB CEJ55_04240 PF01137 RNA 3'-terminal phosphate cyclase CEJ55_04240 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CEJ55_04245 PF00196 Bacterial regulatory proteins, luxR family CEJ55_04250 PF00343 Carbohydrate phosphorylase CEJ55_04255 PF02446 4-alpha-glucanotransferase CEJ55_04260 PF02447 CEJ55_04260 CEJ55_04265 PF01106 NifU-like domain CEJ55_04265 PF01521 Iron-sulphur cluster biosynthesis CEJ55_04270 PF00156 Phosphoribosyl transferase domain CEJ55_04275 PF00561 alpha/beta hydrolase fold CEJ55_04290 PF09012 FeoC like transcriptional regulator CEJ55_04295 PF02421 Ferrous iron transport protein B CEJ55_04295 PF07664 CEJ55_04295 CEJ55_04295 PF07670 Nucleoside recognition CEJ55_04300 PF04023 FeoA domain CEJ55_04310 PF00575 S1 RNA binding domain CEJ55_04310 PF09371 Tex-like protein N-terminal domain CEJ55_04310 PF12836 Helix-hairpin-helix motif CEJ55_04310 PF16921 CEJ55_04310 CEJ55_04315 PF01272 Transcription elongation factor, GreA/GreB, C-term CEJ55_04315 PF03449 Transcription elongation factor, N-terminal CEJ55_04325 PF00072 Response regulator receiver domain CEJ55_04325 PF00486 Transcriptional regulatory protein, C terminal CEJ55_04330 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_04330 PF00672 HAMP domain CEJ55_04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_04335 PF13560 Helix-turn-helix domain CEJ55_04340 PF06296 CEJ55_04340 CEJ55_04345 PF01293 Phosphoenolpyruvate carboxykinase CEJ55_04355 PF13687 CEJ55_04355 CEJ55_04360 PF01430 Hsp33 protein CEJ55_04365 PF01479 S4 domain CEJ55_04370 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_04375 PF07095 Intracellular growth attenuator protein IgaA CEJ55_04380 PF00293 NUDIX domain CEJ55_04385 PF00905 Penicillin binding protein transpeptidase domain CEJ55_04385 PF00912 Transglycosylase CEJ55_04385 PF17092 CEJ55_04385 CEJ55_04395 PF05137 CEJ55_04395 CEJ55_04405 PF10748 CEJ55_04405 CEJ55_04410 PF00263 CEJ55_04410 CEJ55_04410 PF03958 Bacterial type II/III secretion system short domain CEJ55_04420 PF01202 Shikimate kinase CEJ55_04425 PF01761 3-dehydroquinate synthase CEJ55_04430 PF05036 Sporulation related domain CEJ55_04435 PF02086 D12 class N6 adenine-specific DNA methyltransferase CEJ55_04440 PF00834 Ribulose-phosphate 3 epimerase family CEJ55_04445 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_04450 PF00579 tRNA synthetases class I (W and Y) CEJ55_04455 PF14502 Helix-turn-helix domain CEJ55_04455 PF14503 YhfZ C-terminal domain CEJ55_04465 PF01168 Alanine racemase, N-terminal domain CEJ55_04470 PF01676 Metalloenzyme superfamily CEJ55_04475 PF02126 Phosphotriesterase family CEJ55_04480 PF10941 CEJ55_04480 CEJ55_04485 PF10797 CEJ55_04485 CEJ55_04490 PF00155 Aminotransferase class I and II CEJ55_04495 PF00392 Bacterial regulatory proteins, gntR family CEJ55_04495 PF07702 UTRA domain CEJ55_04500 PF00294 pfkB family carbohydrate kinase CEJ55_04505 PF01261 Xylose isomerase-like TIM barrel CEJ55_04515 PF01380 SIS domain CEJ55_04520 PF13520 Amino acid permease CEJ55_04525 PF13978 CEJ55_04525 CEJ55_04530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEJ55_04530 PF10414 Sirohaem synthase dimerisation region CEJ55_04530 PF13241 Putative NAD(P)-binding CEJ55_04530 PF14824 Sirohaem biosynthesis protein central CEJ55_04535 PF01226 Formate/nitrite transporter CEJ55_04540 PF13806 Rieske-like [2Fe-2S] domain CEJ55_04545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEJ55_04545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEJ55_04545 PF04324 BFD-like [2Fe-2S] binding domain CEJ55_04545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_04550 PF07690 Major Facilitator Superfamily CEJ55_04555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEJ55_04560 PF10832 CEJ55_04560 CEJ55_04565 PF02661 Fic/DOC family CEJ55_04570 PF00117 Glutamine amidotransferase class-I CEJ55_04575 PF00202 Aminotransferase class-III CEJ55_04580 PF12805 CEJ55_04580 CEJ55_04580 PF13515 CEJ55_04580 CEJ55_04585 PF00027 Cyclic nucleotide-binding domain CEJ55_04585 PF00325 Bacterial regulatory proteins, crp family CEJ55_04595 PF02566 OsmC-like protein CEJ55_04600 PF00485 Phosphoribulokinase / Uridine kinase family CEJ55_04605 PF06794 Uncharacterised protein family (UPF0270) CEJ55_04610 PF00561 alpha/beta hydrolase fold CEJ55_04615 PF00005 ABC transporter CEJ55_04615 PF12848 ABC transporter CEJ55_04625 PF02525 Flavodoxin-like fold CEJ55_04630 PF00999 Sodium/hydrogen exchanger family CEJ55_04630 PF02254 TrkA-N domain CEJ55_04635 PF09526 CEJ55_04635 CEJ55_04640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ55_04645 PF04102 SlyX CEJ55_04650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ55_04650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEJ55_04655 PF08348 CEJ55_04655 CEJ55_04655 PF13309 CEJ55_04655 CEJ55_04660 PF02635 DsrE/DsrF-like family CEJ55_04665 PF02635 DsrE/DsrF-like family CEJ55_04670 PF04077 DsrH like protein CEJ55_04675 PF00164 Ribosomal protein S12/S23 CEJ55_04680 PF00177 Ribosomal protein S7p/S5e CEJ55_04685 PF00009 Elongation factor Tu GTP binding domain CEJ55_04685 PF00679 Elongation factor G C-terminus CEJ55_04685 PF03144 Elongation factor Tu domain 2 CEJ55_04685 PF03764 Elongation factor G, domain IV CEJ55_04685 PF14492 Elongation Factor G, domain II CEJ55_04690 PF00009 Elongation factor Tu GTP binding domain CEJ55_04690 PF03143 Elongation factor Tu C-terminal domain CEJ55_04690 PF03144 Elongation factor Tu domain 2 CEJ55_04700 PF04324 BFD-like [2Fe-2S] binding domain CEJ55_04705 PF00210 Ferritin-like domain CEJ55_04710 PF01478 Type IV leader peptidase family CEJ55_04720 PF00338 Ribosomal protein S10p/S20e CEJ55_04725 PF00297 Ribosomal protein L3 CEJ55_04730 PF00573 Ribosomal protein L4/L1 family CEJ55_04735 PF00276 Ribosomal protein L23 CEJ55_04740 PF00181 Ribosomal Proteins L2, RNA binding domain CEJ55_04740 PF03947 Ribosomal Proteins L2, C-terminal domain CEJ55_04745 PF00203 Ribosomal protein S19 CEJ55_04750 PF00237 Ribosomal protein L22p/L17e CEJ55_04755 PF00189 Ribosomal protein S3, C-terminal domain CEJ55_04755 PF07650 KH domain CEJ55_04760 PF00252 Ribosomal protein L16p/L10e CEJ55_04765 PF00831 Ribosomal L29 protein CEJ55_04770 PF00366 Ribosomal protein S17 CEJ55_04775 PF00238 Ribosomal protein L14p/L23e CEJ55_04780 PF00467 KOW motif CEJ55_04780 PF17136 CEJ55_04780 CEJ55_04785 PF00281 Ribosomal protein L5 CEJ55_04785 PF00673 ribosomal L5P family C-terminus CEJ55_04790 PF00253 Ribosomal protein S14p/S29e CEJ55_04795 PF00410 Ribosomal protein S8 CEJ55_04800 PF00347 Ribosomal protein L6 CEJ55_04805 PF00861 Ribosomal L18p/L5e family CEJ55_04810 PF00333 Ribosomal protein S5, N-terminal domain CEJ55_04810 PF03719 Ribosomal protein S5, C-terminal domain CEJ55_04815 PF00327 Ribosomal protein L30p/L7e CEJ55_04820 PF00828 Ribosomal protein L18e/L15 CEJ55_04825 PF00344 SecY translocase CEJ55_04830 PF00444 Ribosomal protein L36 CEJ55_04835 PF00416 Ribosomal protein S13/S18 CEJ55_04840 PF00411 Ribosomal protein S11 CEJ55_04845 PF00163 Ribosomal protein S4/S9 N-terminal domain CEJ55_04845 PF01479 S4 domain CEJ55_04850 PF01000 RNA polymerase Rpb3/RpoA insert domain CEJ55_04850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CEJ55_04850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CEJ55_04855 PF01196 Ribosomal protein L17 CEJ55_04860 PF09350 CEJ55_04860 CEJ55_04865 PF13411 MerR HTH family regulatory protein CEJ55_04870 PF03889 CEJ55_04870 CEJ55_04875 PF01741 Large-conductance mechanosensitive channel, MscL CEJ55_04880 PF02080 TrkA-C domain CEJ55_04880 PF02254 TrkA-N domain CEJ55_04885 PF01029 NusB family CEJ55_04885 PF01189 NOL1/NOP2/sun family CEJ55_04890 PF00551 Formyl transferase CEJ55_04890 PF02911 Formyl transferase, C-terminal domain CEJ55_04895 PF01327 Polypeptide deformylase CEJ55_04900 PF02481 DNA recombination-mediator protein A CEJ55_04905 PF04361 CEJ55_04905 CEJ55_04910 PF01396 CEJ55_04910 CEJ55_04915 PF01300 Telomere recombination CEJ55_04920 PF01488 Shikimate / quinate 5-dehydrogenase CEJ55_04920 PF08501 Shikimate dehydrogenase substrate binding domain CEJ55_04925 PF07369 Protein of unknown function (DUF1488) CEJ55_04930 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_04970 PF00005 ABC transporter CEJ55_04975 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_04980 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_04985 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_05000 PF00873 AcrB/AcrD/AcrF family CEJ55_05005 PF00529 HlyD family secretion protein CEJ55_05005 PF16576 CEJ55_05005 CEJ55_05015 PF00440 Bacterial regulatory proteins, tetR family CEJ55_05015 PF08361 MAATS-type transcriptional repressor, C-terminal region CEJ55_05020 PF10831 CEJ55_05020 CEJ55_05025 PF01555 DNA methylase CEJ55_05030 PF00589 Phage integrase family CEJ55_05030 PF13356 Domain of unknown function (DUF4102) CEJ55_05035 PF05930 Prophage CP4-57 regulatory protein (AlpA) CEJ55_05045 PF05272 CEJ55_05045 CEJ55_05080 PF10145 CEJ55_05080 CEJ55_05085 PF02954 Bacterial regulatory protein, Fis family CEJ55_05090 PF01207 Dihydrouridine synthase (Dus) CEJ55_05095 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CEJ55_05100 PF00474 Sodium:solute symporter family CEJ55_05105 PF06196 CEJ55_05105 CEJ55_05110 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CEJ55_05110 PF02785 Biotin carboxylase C-terminal domain CEJ55_05110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEJ55_05115 PF00364 Biotin-requiring enzyme CEJ55_05125 PF00107 Zinc-binding dehydrogenase CEJ55_05125 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_05130 PF00563 EAL domain CEJ55_05130 PF00990 GGDEF domain CEJ55_05130 PF17157 CEJ55_05130 CEJ55_05145 PF06723 MreB/Mbl protein CEJ55_05150 PF04085 rod shape-determining protein MreC CEJ55_05155 PF04093 CEJ55_05155 CEJ55_05160 PF02545 Maf-like protein CEJ55_05165 PF00575 S1 RNA binding domain CEJ55_05165 PF10150 Ribonuclease E/G family CEJ55_05170 PF13116 CEJ55_05170 CEJ55_05170 PF13502 CEJ55_05170 CEJ55_05175 PF01523 Putative modulator of DNA gyrase CEJ55_05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_05180 PF03466 LysR substrate binding domain CEJ55_05185 PF07869 CEJ55_05185 CEJ55_05190 PF13437 HlyD family secretion protein CEJ55_05190 PF13533 Biotin-lipoyl like CEJ55_05195 PF04632 CEJ55_05195 CEJ55_05200 PF01337 Barstar (barnase inhibitor) CEJ55_05205 PF07338 Protein of unknown function (DUF1471) CEJ55_05210 PF01316 Arginine repressor, DNA binding domain CEJ55_05210 PF02863 Arginine repressor, C-terminal domain CEJ55_05215 PF00056 lactate/malate dehydrogenase, NAD binding domain CEJ55_05215 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEJ55_05220 PF13180 PDZ domain CEJ55_05220 PF13365 Trypsin-like peptidase domain CEJ55_05225 PF00595 PDZ domain (Also known as DHR or GLGF) CEJ55_05225 PF13180 PDZ domain CEJ55_05225 PF13365 Trypsin-like peptidase domain CEJ55_05230 PF06295 CEJ55_05230 CEJ55_05235 PF03969 AFG1-like ATPase CEJ55_05240 PF00572 Ribosomal protein L13 CEJ55_05245 PF00380 Ribosomal protein S9/S16 CEJ55_05265 PF00043 Glutathione S-transferase, C-terminal domain CEJ55_05265 PF02798 Glutathione S-transferase, N-terminal domain CEJ55_05270 PF04386 Stringent starvation protein B CEJ55_05275 PF03606 CEJ55_05275 CEJ55_05285 PF00392 Bacterial regulatory proteins, gntR family CEJ55_05285 PF07729 FCD domain CEJ55_05290 PF00701 Dihydrodipicolinate synthetase family CEJ55_05295 PF07690 Major Facilitator Superfamily CEJ55_05300 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CEJ55_05305 PF00480 ROK family CEJ55_05310 PF04074 Domain of unknown function (DUF386) CEJ55_05320 PF06250 CEJ55_05320 CEJ55_05325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_05325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEJ55_05330 PF00310 Glutamine amidotransferases class-II CEJ55_05330 PF01493 GXGXG motif CEJ55_05330 PF01645 Conserved region in glutamate synthase CEJ55_05330 PF04898 Glutamate synthase central domain CEJ55_05345 PF04055 Radical SAM superfamily CEJ55_05345 PF16199 CEJ55_05345 CEJ55_05350 PF00072 Response regulator receiver domain CEJ55_05350 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_05350 PF00989 PAS fold CEJ55_05350 PF01627 Hpt domain CEJ55_05350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_05360 PF00912 Transglycosylase CEJ55_05365 PF10707 CEJ55_05365 CEJ55_05370 PF00381 PTS HPr component phosphorylation site CEJ55_05375 PF03668 CEJ55_05375 CEJ55_05380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_05385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEJ55_05390 PF00309 CEJ55_05390 CEJ55_05390 PF04552 Sigma-54, DNA binding domain CEJ55_05390 PF04963 Sigma-54 factor, core binding domain CEJ55_05395 PF00005 ABC transporter CEJ55_05395 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEJ55_05400 PF03968 OstA-like protein CEJ55_05405 PF06835 Lipopolysaccharide-assembly, LptC-related CEJ55_05410 PF08282 haloacid dehalogenase-like hydrolase CEJ55_05415 PF00571 CBS domain CEJ55_05415 PF01380 SIS domain CEJ55_05420 PF01699 Sodium/calcium exchanger protein CEJ55_05425 PF00005 ABC transporter CEJ55_05430 PF02405 CEJ55_05430 CEJ55_05435 PF02470 CEJ55_05435 CEJ55_05440 PF05494 Toluene tolerance, Ttg2 CEJ55_05445 PF13466 STAS domain CEJ55_05450 PF01722 BolA-like protein CEJ55_05455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEJ55_05460 PF13693 Winged helix-turn-helix DNA-binding CEJ55_05465 PF00348 Polyprenyl synthetase CEJ55_05470 PF00829 Ribosomal prokaryotic L21 protein CEJ55_05475 PF01016 Ribosomal L27 protein CEJ55_05480 PF00892 EamA-like transporter family CEJ55_05485 PF01018 GTP1/OBG CEJ55_05485 PF01926 50S ribosome-binding GTPase CEJ55_05490 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CEJ55_05495 PF01272 Transcription elongation factor, GreA/GreB, C-term CEJ55_05495 PF03449 Transcription elongation factor, N-terminal CEJ55_05500 PF01985 CRS1 / YhbY (CRM) domain CEJ55_05505 PF01728 FtsJ-like methyltransferase CEJ55_05510 PF00004 ATPase family associated with various cellular activities (AAA) CEJ55_05510 PF01434 Peptidase family M41 CEJ55_05510 PF06480 FtsH Extracellular CEJ55_05515 PF00809 Pterin binding enzyme CEJ55_05520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEJ55_05520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEJ55_05520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEJ55_05520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEJ55_05525 PF03840 Preprotein translocase SecG subunit CEJ55_05535 PF00884 Sulfatase CEJ55_05540 PF00764 Arginosuccinate synthase CEJ55_05550 PF02576 Uncharacterised BCR, YhbC family COG0779 CEJ55_05550 PF17384 CEJ55_05550 CEJ55_05555 PF00575 S1 RNA binding domain CEJ55_05555 PF08529 NusA N-terminal domain CEJ55_05555 PF13184 NusA-like KH domain CEJ55_05555 PF14520 Helix-hairpin-helix domain CEJ55_05560 PF00009 Elongation factor Tu GTP binding domain CEJ55_05560 PF04760 Translation initiation factor IF-2, N-terminal region CEJ55_05560 PF08364 CEJ55_05560 CEJ55_05560 PF11987 Translation-initiation factor 2 CEJ55_05565 PF02033 Ribosome-binding factor A CEJ55_05570 PF01509 TruB family pseudouridylate synthase (N terminal domain) CEJ55_05570 PF09157 Pseudouridine synthase II TruB, C-terminal CEJ55_05570 PF16198 CEJ55_05570 CEJ55_05575 PF00312 Ribosomal protein S15 CEJ55_05580 PF00013 KH domain CEJ55_05580 PF00575 S1 RNA binding domain CEJ55_05580 PF01138 3' exoribonuclease family, domain 1 CEJ55_05580 PF03725 3' exoribonuclease family, domain 2 CEJ55_05580 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CEJ55_05585 PF07719 Tetratricopeptide repeat CEJ55_05585 PF13181 Tetratricopeptide repeat CEJ55_05595 PF00270 DEAD/DEAH box helicase CEJ55_05595 PF00271 Helicase conserved C-terminal domain CEJ55_05595 PF03880 DbpA RNA binding domain CEJ55_05595 PF12343 CEJ55_05595 CEJ55_05600 PF03222 Tryptophan/tyrosine permease family CEJ55_05605 PF00296 Luciferase-like monooxygenase CEJ55_05610 PF01136 CEJ55_05610 CEJ55_05615 PF01136 CEJ55_05615 CEJ55_05620 PF02036 SCP-2 sterol transfer family CEJ55_05625 PF13508 Acetyltransferase (GNAT) domain CEJ55_05630 PF01541 GIY-YIG catalytic domain CEJ55_05640 PF01965 DJ-1/PfpI family CEJ55_05645 PF13460 NADH(P)-binding CEJ55_05650 PF03773 CEJ55_05650 CEJ55_05655 PF04972 BON domain CEJ55_05660 PF13580 SIS domain CEJ55_05665 PF02021 Uncharacterised protein family UPF0102 CEJ55_05670 PF04348 LppC putative lipoprotein CEJ55_05675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEJ55_05680 PF00419 Fimbrial protein CEJ55_05685 PF00577 Outer membrane usher protein CEJ55_05685 PF13953 PapC C-terminal domain CEJ55_05685 PF13954 PapC N-terminal domain CEJ55_05690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_05690 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_05695 PF00419 Fimbrial protein CEJ55_05700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEJ55_05705 PF03613 CEJ55_05705 CEJ55_05710 PF03609 CEJ55_05710 CEJ55_05715 PF03830 PTS system sorbose subfamily IIB component CEJ55_05720 PF01116 Fructose-bisphosphate aldolase class-II CEJ55_05725 PF01380 SIS domain CEJ55_05730 PF01979 Amidohydrolase family CEJ55_05735 PF03610 PTS system fructose IIA component CEJ55_05740 PF03613 CEJ55_05740 CEJ55_05745 PF03609 CEJ55_05745 CEJ55_05750 PF03830 PTS system sorbose subfamily IIB component CEJ55_05755 PF08013 Tagatose 6 phosphate kinase CEJ55_05765 PF00455 CEJ55_05765 CEJ55_05765 PF08220 DeoR-like helix-turn-helix domain CEJ55_05770 PF11663 CEJ55_05770 CEJ55_05775 PF15937 CEJ55_05775 CEJ55_05780 PF04295 CEJ55_05780 CEJ55_05780 PF08666 SAF domain CEJ55_05785 PF07690 Major Facilitator Superfamily CEJ55_05790 PF03328 HpcH/HpaI aldolase/citrate lyase family CEJ55_05795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEJ55_05795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEJ55_05800 PF02595 Glycerate kinase family CEJ55_05825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_05825 PF03466 LysR substrate binding domain CEJ55_05835 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_05840 PF03222 Tryptophan/tyrosine permease family CEJ55_05845 PF00871 Acetokinase family CEJ55_05850 PF01228 Glycine radical CEJ55_05850 PF02901 Pyruvate formate lyase CEJ55_05855 PF01042 Endoribonuclease L-PSP CEJ55_05860 PF03313 CEJ55_05860 CEJ55_05860 PF03315 Serine dehydratase beta chain CEJ55_05870 PF03313 CEJ55_05870 CEJ55_05880 PF02678 Pirin CEJ55_05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_05885 PF03466 LysR substrate binding domain CEJ55_05895 PF05656 CEJ55_05895 CEJ55_05900 PF05656 CEJ55_05900 CEJ55_05905 PF13409 Glutathione S-transferase, N-terminal domain CEJ55_05905 PF13410 Glutathione S-transferase, C-terminal domain CEJ55_05910 PF07681 CEJ55_05910 CEJ55_05915 PF13997 CEJ55_05915 CEJ55_05920 PF07332 CEJ55_05920 CEJ55_05925 PF05957 CEJ55_05925 CEJ55_05930 PF06476 CEJ55_05930 CEJ55_05935 PF13721 SecD export protein N-terminal TM region CEJ55_05940 PF09335 CEJ55_05940 CEJ55_05945 PF00392 Bacterial regulatory proteins, gntR family CEJ55_05945 PF07729 FCD domain CEJ55_05950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_05955 PF04449 CS1 type fimbrial major subunit CEJ55_05960 PF15976 CEJ55_05960 CEJ55_05960 PF16967 CEJ55_05960 CEJ55_05960 PF17271 CEJ55_05960 CEJ55_05965 PF07434 CblD like pilus biogenesis initiator CEJ55_05970 PF07690 Major Facilitator Superfamily CEJ55_05975 PF02614 Glucuronate isomerase CEJ55_05980 PF04295 CEJ55_05980 CEJ55_05980 PF08666 SAF domain CEJ55_05985 PF10688 CEJ55_05985 CEJ55_05990 PF00375 Sodium:dicarboxylate symporter family CEJ55_05995 PF03741 CEJ55_05995 CEJ55_06000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEJ55_06005 PF02698 DUF218 domain CEJ55_06010 PF01863 Protein of unknown function DUF45 CEJ55_06015 PF05175 Methyltransferase small domain CEJ55_06025 PF01381 Helix-turn-helix CEJ55_06030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEJ55_06030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_06035 PF01204 Trehalase CEJ55_06045 PF13520 Amino acid permease CEJ55_06050 PF04074 Domain of unknown function (DUF386) CEJ55_06055 PF00703 Glycosyl hydrolases family 2 CEJ55_06055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEJ55_06055 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEJ55_06055 PF02929 Beta galactosidase small chain CEJ55_06055 PF16353 CEJ55_06055 CEJ55_06060 PF00356 Bacterial regulatory proteins, lacI family CEJ55_06060 PF13377 Periplasmic binding protein-like domain CEJ55_06070 PF01588 Putative tRNA binding domain CEJ55_06075 PF00202 Aminotransferase class-III CEJ55_06085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ55_06085 PF08447 PAS fold CEJ55_06090 PF03551 Transcriptional regulator PadR-like family CEJ55_06100 PF04954 Siderophore-interacting protein CEJ55_06100 PF08021 Siderophore-interacting FAD-binding domain CEJ55_06110 PF03167 Uracil DNA glycosylase superfamily CEJ55_06115 PF00140 Sigma-70 factor, region 1 CEJ55_06115 PF03979 Sigma-70 factor, region 1 CEJ55_06115 PF04539 Sigma-70 region 3 CEJ55_06115 PF04542 Sigma-70 region 2 CEJ55_06115 PF04545 Sigma-70, region 4 CEJ55_06115 PF04546 Sigma-70, non-essential region CEJ55_06125 PF01807 CHC2 zinc finger CEJ55_06125 PF08275 DNA primase catalytic core, N-terminal domain CEJ55_06125 PF08278 DNA primase DnaG DnaB-binding CEJ55_06125 PF10410 DnaB-helicase binding domain of primase CEJ55_06125 PF13155 Toprim-like CEJ55_06130 PF01165 Ribosomal protein S21 CEJ55_06135 PF00814 Glycoprotease family CEJ55_06140 PF00939 Sodium:sulfate symporter transmembrane region CEJ55_06145 PF05683 Fumarase C-terminus CEJ55_06150 PF05681 CEJ55_06150 CEJ55_06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_06160 PF03466 LysR substrate binding domain CEJ55_06165 PF02660 CEJ55_06165 CEJ55_06170 PF02152 Dihydroneopterin aldolase CEJ55_06175 PF02673 CEJ55_06175 CEJ55_06180 PF01743 Poly A polymerase head domain CEJ55_06180 PF01966 HD domain CEJ55_06180 PF12627 Probable RNA and SrmB- binding site of polymerase A CEJ55_06185 PF08239 Bacterial SH3 domain CEJ55_06195 PF01928 CYTH domain CEJ55_06200 PF03710 Glutamate-ammonia ligase adenylyltransferase CEJ55_06200 PF08335 GlnD PII-uridylyltransferase CEJ55_06205 PF00294 pfkB family carbohydrate kinase CEJ55_06205 PF01467 Cytidylyltransferase CEJ55_06215 PF01145 SPFH domain / Band 7 family CEJ55_06215 PF15975 CEJ55_06215 CEJ55_06220 PF07290 CEJ55_06220 CEJ55_06225 PF08971 Glycogen synthesis protein CEJ55_06230 PF00419 Fimbrial protein CEJ55_06235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_06235 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_06240 PF00577 Outer membrane usher protein CEJ55_06240 PF13953 PapC C-terminal domain CEJ55_06240 PF13954 PapC N-terminal domain CEJ55_06245 PF00419 Fimbrial protein CEJ55_06250 PF04380 CEJ55_06250 CEJ55_06255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEJ55_06260 PF13260 CEJ55_06260 CEJ55_06265 PF02535 CEJ55_06265 CEJ55_06270 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEJ55_06275 PF03738 Glutathionylspermidine synthase preATP-grasp CEJ55_06280 PF06693 CEJ55_06280 CEJ55_06290 PF02321 Outer membrane efflux protein CEJ55_06295 PF00293 NUDIX domain CEJ55_06300 PF06853 CEJ55_06300 CEJ55_06305 PF00149 Calcineurin-like phosphoesterase CEJ55_06310 PF05728 Uncharacterised protein family (UPF0227) CEJ55_06315 PF00204 DNA gyrase B CEJ55_06315 PF00986 DNA gyrase B subunit, carboxyl terminus CEJ55_06315 PF01751 Toprim domain CEJ55_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_06320 PF03992 Antibiotic biosynthesis monooxygenase CEJ55_06325 PF02525 Flavodoxin-like fold CEJ55_06330 PF10840 CEJ55_06330 CEJ55_06335 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_06335 PF08521 CEJ55_06335 CEJ55_06340 PF00072 Response regulator receiver domain CEJ55_06340 PF00486 Transcriptional regulatory protein, C terminal CEJ55_06345 PF04076 Bacterial OB fold (BOF) protein CEJ55_06350 PF06445 GyrI-like small molecule binding domain CEJ55_06360 PF00521 DNA gyrase/topoisomerase IV, subunit A CEJ55_06360 PF03989 DNA gyrase C-terminal domain, beta-propeller CEJ55_06365 PF01553 Acyltransferase CEJ55_06370 PF00394 Multicopper oxidase CEJ55_06370 PF07731 Multicopper oxidase CEJ55_06370 PF07732 Multicopper oxidase CEJ55_06375 PF04055 Radical SAM superfamily CEJ55_06375 PF08497 CEJ55_06375 CEJ55_06375 PF11842 CEJ55_06375 CEJ55_06380 PF04728 Lipoprotein leucine-zipper CEJ55_06385 PF12883 Protein of unknown function (DUF3828) CEJ55_06390 PF00248 Aldo/keto reductase family CEJ55_06395 PF00465 Iron-containing alcohol dehydrogenase CEJ55_06400 PF06719 CEJ55_06400 CEJ55_06400 PF12833 Helix-turn-helix domain CEJ55_06405 PF09335 CEJ55_06405 CEJ55_06410 PF01053 Cys/Met metabolism PLP-dependent enzyme CEJ55_06420 PF01618 CEJ55_06420 CEJ55_06425 PF02472 Biopolymer transport protein ExbD/TolR CEJ55_06430 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_06435 PF03350 CEJ55_06435 CEJ55_06440 PF00248 Aldo/keto reductase family CEJ55_06445 PF01738 Dienelactone hydrolase family CEJ55_06450 PF11115 CEJ55_06450 CEJ55_06460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEJ55_06460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CEJ55_06465 PF13247 4Fe-4S dicluster domain CEJ55_06470 PF03916 CEJ55_06470 CEJ55_06475 PF00374 Nickel-dependent hydrogenase CEJ55_06480 PF01750 Hydrogenase maturation protease CEJ55_06485 PF11939 Protein of unknown function (DUF3457) CEJ55_06490 PF01155 Hydrogenase expression/synthesis hypA family CEJ55_06495 PF01455 HupF/HypC family CEJ55_06500 PF01548 CEJ55_06500 CEJ55_06500 PF02371 CEJ55_06500 CEJ55_06510 PF02798 Glutathione S-transferase, N-terminal domain CEJ55_06510 PF13410 Glutathione S-transferase, C-terminal domain CEJ55_06515 PF03738 Glutathionylspermidine synthase preATP-grasp CEJ55_06515 PF05257 CHAP domain CEJ55_06525 PF01384 CEJ55_06525 CEJ55_06545 PF01943 CEJ55_06545 CEJ55_06555 PF09695 CEJ55_06555 CEJ55_06560 PF03739 CEJ55_06560 CEJ55_06565 PF03739 CEJ55_06565 CEJ55_06570 PF00155 Aminotransferase class I and II CEJ55_06575 PF00550 Phosphopantetheine attachment site CEJ55_06580 PF01370 NAD dependent epimerase/dehydratase family CEJ55_06585 PF00501 AMP-binding enzyme CEJ55_06600 PF00392 Bacterial regulatory proteins, gntR family CEJ55_06600 PF07729 FCD domain CEJ55_06605 PF01565 FAD binding domain CEJ55_06605 PF02913 FAD linked oxidases, C-terminal domain CEJ55_06610 PF01565 FAD binding domain CEJ55_06615 PF02754 CEJ55_06615 CEJ55_06615 PF13183 4Fe-4S dicluster domain CEJ55_06620 PF03928 Domain of unknown function (DUF336) CEJ55_06625 PF01274 Malate synthase CEJ55_06630 PF02652 CEJ55_06630 CEJ55_06640 PF13322 CEJ55_06640 CEJ55_06640 PF13402 Peptidase M60-like family CEJ55_06640 PF17291 CEJ55_06640 CEJ55_06645 PF01478 Type IV leader peptidase family CEJ55_06645 PF06750 CEJ55_06645 CEJ55_06650 PF16549 CEJ55_06650 CEJ55_06655 PF11356 Type IV pilus biogenesis CEJ55_06660 PF00263 CEJ55_06660 CEJ55_06660 PF03958 Bacterial type II/III secretion system short domain CEJ55_06665 PF00437 Type II/IV secretion system protein CEJ55_06670 PF00482 Type II secretion system (T2SS), protein F CEJ55_06675 PF07963 Prokaryotic N-terminal methylation motif CEJ55_06675 PF08334 Type II secretion system (T2SS), protein G CEJ55_06680 PF07963 Prokaryotic N-terminal methylation motif CEJ55_06680 PF12019 Type II transport protein GspH CEJ55_06685 PF02501 Type II secretion system (T2SS), protein I CEJ55_06685 PF07963 Prokaryotic N-terminal methylation motif CEJ55_06690 PF07963 Prokaryotic N-terminal methylation motif CEJ55_06690 PF11612 Type II secretion system (T2SS), protein J CEJ55_06695 PF03934 Type II secretion system (T2SS), protein K CEJ55_06700 PF05134 Type II secretion system (T2SS), protein L CEJ55_06700 PF12693 GspL periplasmic domain CEJ55_06705 PF04612 Type II secretion system (T2SS), protein M CEJ55_06710 PF00563 EAL domain CEJ55_06710 PF12792 CEJ55_06710 CEJ55_06715 PF13708 CEJ55_06715 CEJ55_06720 PF06117 CEJ55_06720 CEJ55_06725 PF06755 CEJ55_06725 CEJ55_06730 PF06154 YagB/YeeU/YfjZ family CEJ55_06740 PF06174 CEJ55_06740 CEJ55_06745 PF04002 RadC-like JAB domain CEJ55_06750 PF03230 Antirestriction protein CEJ55_06755 PF06067 CEJ55_06755 CEJ55_06760 PF06006 Bacterial protein of unknown function (DUF905) CEJ55_06765 PF03797 Autotransporter beta-domain CEJ55_06765 PF13018 CEJ55_06765 CEJ55_06765 PF16168 CEJ55_06765 CEJ55_06770 PF01926 50S ribosome-binding GTPase CEJ55_06775 PF13148 CEJ55_06775 CEJ55_06800 PF11726 CEJ55_06800 CEJ55_06805 PF11682 CEJ55_06805 CEJ55_06810 PF11682 CEJ55_06810 CEJ55_06825 PF13973 CEJ55_06825 CEJ55_06830 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEJ55_06830 PF08479 POTRA domain, ShlB-type CEJ55_06830 PF17287 CEJ55_06830 CEJ55_06835 PF02794 CEJ55_06835 CEJ55_06845 PF04829 CEJ55_06845 CEJ55_06860 PF10754 CEJ55_06860 CEJ55_06880 PF01609 Transposase DDE domain CEJ55_06880 PF13006 CEJ55_06880 CEJ55_06890 PF05717 CEJ55_06890 CEJ55_06895 PF01527 Transposase CEJ55_06900 PF00196 Bacterial regulatory proteins, luxR family CEJ55_06905 PF03212 Pertactin CEJ55_06905 PF03797 Autotransporter beta-domain CEJ55_06905 PF13018 CEJ55_06905 CEJ55_06915 PF02452 PemK-like protein CEJ55_06925 PF02517 CAAX protease self-immunity CEJ55_06930 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ55_06935 PF03212 Pertactin CEJ55_06935 PF03797 Autotransporter beta-domain CEJ55_06935 PF13018 CEJ55_06935 CEJ55_06935 PF16168 CEJ55_06935 CEJ55_06940 PF03050 CEJ55_06940 CEJ55_06940 PF13005 CEJ55_06940 CEJ55_06940 PF13007 CEJ55_06940 CEJ55_06940 PF13817 CEJ55_06940 CEJ55_06945 PF05717 CEJ55_06945 CEJ55_06950 PF01527 Transposase CEJ55_06965 PF05717 CEJ55_06965 CEJ55_06970 PF01527 Transposase CEJ55_06975 PF03895 YadA-like C-terminal region CEJ55_06975 PF05658 Head domain of trimeric autotransporter adhesin CEJ55_06975 PF05662 Coiled stalk of trimeric autotransporter adhesin CEJ55_06990 PF03212 Pertactin CEJ55_06990 PF03797 Autotransporter beta-domain CEJ55_06990 PF12951 CEJ55_06990 CEJ55_06990 PF13018 CEJ55_06990 CEJ55_06995 PF01527 Transposase CEJ55_07005 PF12833 Helix-turn-helix domain CEJ55_07010 PF00196 Bacterial regulatory proteins, luxR family CEJ55_07030 PF14163 CEJ55_07030 CEJ55_07035 PF07087 CEJ55_07035 CEJ55_07045 PF12833 Helix-turn-helix domain CEJ55_07055 PF00589 Phage integrase family CEJ55_07055 PF13356 Domain of unknown function (DUF4102) CEJ55_07070 PF02683 CEJ55_07070 CEJ55_07070 PF11412 Disulphide bond corrector protein DsbC CEJ55_07070 PF13899 Thioredoxin-like CEJ55_07075 PF03091 CutA1 divalent ion tolerance protein CEJ55_07080 PF03605 CEJ55_07080 CEJ55_07085 PF00206 Lyase CEJ55_07085 PF10415 Fumarase C C-terminus CEJ55_07090 PF04186 CEJ55_07090 CEJ55_07095 PF13520 Amino acid permease CEJ55_07100 PF00166 Chaperonin 10 Kd subunit CEJ55_07105 PF00118 TCP-1/cpn60 chaperonin family CEJ55_07110 PF13698 CEJ55_07110 CEJ55_07115 PF15922 CEJ55_07115 CEJ55_07120 PF04055 Radical SAM superfamily CEJ55_07120 PF13353 4Fe-4S single cluster domain CEJ55_07125 PF01132 Elongation factor P (EF-P) OB domain CEJ55_07125 PF08207 Elongation factor P (EF-P) KOW-like domain CEJ55_07125 PF09285 Elongation factor P, C-terminal CEJ55_07130 PF08085 CEJ55_07130 CEJ55_07135 PF08085 CEJ55_07135 CEJ55_07140 PF00893 Small Multidrug Resistance protein CEJ55_07145 PF08212 Lipocalin-like domain CEJ55_07150 PF00144 Beta-lactamase CEJ55_07155 PF02313 Fumarate reductase subunit D CEJ55_07160 PF02300 Fumarate reductase subunit C CEJ55_07165 PF13085 2Fe-2S iron-sulfur cluster binding domain CEJ55_07165 PF13183 4Fe-4S dicluster domain CEJ55_07170 PF00890 FAD binding domain CEJ55_07170 PF02910 Fumarate reductase flavoprotein C-term CEJ55_07175 PF00152 tRNA synthetases class II (D, K and N) CEJ55_07180 PF13520 Amino acid permease CEJ55_07190 PF10840 CEJ55_07190 CEJ55_07195 PF00924 Mechanosensitive ion channel CEJ55_07195 PF12794 CEJ55_07195 CEJ55_07195 PF12795 CEJ55_07195 CEJ55_07200 PF02666 CEJ55_07200 CEJ55_07205 PF03193 Protein of unknown function, DUF258 CEJ55_07215 PF00929 Exonuclease CEJ55_07235 PF08331 CEJ55_07235 CEJ55_07235 PF13484 CEJ55_07235 CEJ55_07240 PF01256 Carbohydrate kinase CEJ55_07240 PF03853 YjeF-related protein N-terminus CEJ55_07245 PF02367 Uncharacterised P-loop hydrolase UPF0079 CEJ55_07250 PF01520 N-acetylmuramoyl-L-alanine amidase CEJ55_07255 PF01119 DNA mismatch repair protein, C-terminal domain CEJ55_07255 PF08676 MutL C terminal dimerisation domain CEJ55_07255 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_07260 PF01715 IPP transferase CEJ55_07265 PF17209 CEJ55_07265 CEJ55_07270 PF01926 50S ribosome-binding GTPase CEJ55_07270 PF13167 CEJ55_07270 CEJ55_07270 PF16360 CEJ55_07270 CEJ55_07275 PF01145 SPFH domain / Band 7 family CEJ55_07275 PF12221 CEJ55_07275 CEJ55_07280 PF01145 SPFH domain / Band 7 family CEJ55_07285 PF09838 CEJ55_07285 CEJ55_07290 PF00709 Adenylosuccinate synthetase CEJ55_07295 PF02082 Transcriptional regulator CEJ55_07300 PF00575 S1 RNA binding domain CEJ55_07300 PF00773 RNB domain CEJ55_07300 PF08206 Ribonuclease B OB domain CEJ55_07300 PF08461 Ribonuclease R winged-helix domain CEJ55_07305 PF00588 SpoU rRNA Methylase family CEJ55_07305 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEJ55_07310 PF09938 CEJ55_07310 CEJ55_07315 PF04012 CEJ55_07315 CEJ55_07320 PF10679 CEJ55_07320 CEJ55_07325 PF03994 CEJ55_07325 CEJ55_07330 PF06693 CEJ55_07330 CEJ55_07335 PF03738 Glutathionylspermidine synthase preATP-grasp CEJ55_07340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEJ55_07340 PF02770 Acyl-CoA dehydrogenase, middle domain CEJ55_07350 PF07338 Protein of unknown function (DUF1471) CEJ55_07355 PF07338 Protein of unknown function (DUF1471) CEJ55_07360 PF00326 Prolyl oligopeptidase family CEJ55_07365 PF00455 CEJ55_07365 CEJ55_07365 PF08220 DeoR-like helix-turn-helix domain CEJ55_07370 PF13483 Beta-lactamase superfamily domain CEJ55_07375 PF03611 CEJ55_07375 CEJ55_07380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_07385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_07390 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEJ55_07395 PF01261 Xylose isomerase-like TIM barrel CEJ55_07400 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ55_07405 PF07274 CEJ55_07405 CEJ55_07410 PF07338 Protein of unknown function (DUF1471) CEJ55_07415 PF01250 Ribosomal protein S6 CEJ55_07420 PF00436 Single-strand binding protein family CEJ55_07425 PF01084 Ribosomal protein S18 CEJ55_07430 PF01281 Ribosomal protein L9, N-terminal domain CEJ55_07430 PF03948 Ribosomal protein L9, C-terminal domain CEJ55_07435 PF10887 CEJ55_07435 CEJ55_07450 PF01797 Transposase IS200 like CEJ55_07455 PF01385 CEJ55_07455 CEJ55_07455 PF07282 CEJ55_07455 CEJ55_07455 PF12323 CEJ55_07455 CEJ55_07465 PF04225 Opacity-associated protein A LysM-like domain CEJ55_07465 PF08525 CEJ55_07465 CEJ55_07475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ55_07475 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEJ55_07480 PF00324 Amino acid permease CEJ55_07485 PF01814 Hemerythrin HHE cation binding domain CEJ55_07485 PF04405 CEJ55_07485 CEJ55_07490 PF00892 EamA-like transporter family CEJ55_07495 PF05368 NmrA-like family CEJ55_07500 PF01638 HxlR-like helix-turn-helix CEJ55_07505 PF00149 Calcineurin-like phosphoesterase CEJ55_07505 PF02872 5'-nucleotidase, C-terminal domain CEJ55_07510 PF00459 Inositol monophosphatase family CEJ55_07515 PF09695 CEJ55_07515 CEJ55_07520 PF06526 Protein of unknown function (DUF1107) CEJ55_07525 PF00571 CBS domain CEJ55_07525 PF01595 CEJ55_07525 CEJ55_07525 PF03471 Transporter associated domain CEJ55_07530 PF01625 Peptide methionine sulfoxide reductase CEJ55_07540 PF01103 Surface antigen CEJ55_07540 PF07244 Surface antigen variable number repeat CEJ55_07540 PF17243 CEJ55_07540 CEJ55_07545 PF04357 CEJ55_07545 CEJ55_07550 PF06094 AIG2-like family CEJ55_07555 PF00719 Inorganic pyrophosphatase CEJ55_07560 PF13407 Periplasmic binding protein domain CEJ55_07565 PF00005 ABC transporter CEJ55_07570 PF02653 CEJ55_07570 CEJ55_07575 PF02653 CEJ55_07575 CEJ55_07580 PF00316 Fructose-1-6-bisphosphatase CEJ55_07585 PF01225 Mur ligase family, catalytic domain CEJ55_07585 PF02875 Mur ligase family, glutamate ligase domain CEJ55_07585 PF08245 Mur ligase middle domain CEJ55_07590 PF04751 Protein of unknown function (DUF615) CEJ55_07595 PF01523 Putative modulator of DNA gyrase CEJ55_07600 PF07361 Cytochrome b562 CEJ55_07605 PF13353 4Fe-4S single cluster domain CEJ55_07610 PF03477 ATP cone domain CEJ55_07610 PF13597 Anaerobic ribonucleoside-triphosphate reductase CEJ55_07615 PF00128 Alpha amylase, catalytic domain CEJ55_07615 PF11941 Domain of unknown function (DUF3459) CEJ55_07620 PF00367 phosphotransferase system, EIIB CEJ55_07620 PF02378 Phosphotransferase system, EIIC CEJ55_07625 PF00356 Bacterial regulatory proteins, lacI family CEJ55_07625 PF13377 Periplasmic binding protein-like domain CEJ55_07630 PF00122 E1-E2 ATPase CEJ55_07630 PF00689 Cation transporting ATPase, C-terminus CEJ55_07630 PF00690 Cation transporter/ATPase, N-terminus CEJ55_07630 PF00702 haloacid dehalogenase-like hydrolase CEJ55_07635 PF01527 Transposase CEJ55_07640 PF01042 Endoribonuclease L-PSP CEJ55_07645 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEJ55_07645 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEJ55_07650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEJ55_07650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEJ55_07655 PF08052 CEJ55_07655 CEJ55_07665 PF01042 Endoribonuclease L-PSP CEJ55_07670 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_07675 PF00440 Bacterial regulatory proteins, tetR family CEJ55_07680 PF04074 Domain of unknown function (DUF386) CEJ55_07695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEJ55_07695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEJ55_07700 PF06877 Regulator of ribonuclease activity B CEJ55_07705 PF00583 Acetyltransferase (GNAT) family CEJ55_07710 PF05987 CEJ55_07710 CEJ55_07715 PF00133 tRNA synthetases class I (I, L, M and V) CEJ55_07715 PF08264 Anticodon-binding domain of tRNA CEJ55_07715 PF10458 Valyl tRNA synthetase tRNA binding arm CEJ55_07720 PF04364 DNA polymerase III chi subunit, HolC CEJ55_07725 PF00883 Cytosol aminopeptidase family, catalytic domain CEJ55_07725 PF02789 Cytosol aminopeptidase family, N-terminal domain CEJ55_07730 PF03739 CEJ55_07730 CEJ55_07735 PF03739 CEJ55_07735 CEJ55_07740 PF05872 CEJ55_07740 CEJ55_07745 PF00107 Zinc-binding dehydrogenase CEJ55_07745 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_07755 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CEJ55_07755 PF04851 Type III restriction enzyme, res subunit CEJ55_07755 PF12008 Type I restriction and modification enzyme - subunit R C terminal CEJ55_07760 PF01420 Type I restriction modification DNA specificity domain CEJ55_07765 PF02384 N-6 DNA Methylase CEJ55_07765 PF12161 HsdM N-terminal domain CEJ55_07770 PF13708 CEJ55_07770 CEJ55_07775 PF13338 CEJ55_07775 CEJ55_07780 PF08843 Nucleotidyl transferase of unknown function (DUF1814) CEJ55_07800 PF01844 HNH endonuclease CEJ55_07805 PF03629 Domain of unknown function (DUF303) CEJ55_07810 PF01344 Kelch motif CEJ55_07815 PF06178 Oligogalacturonate-specific porin protein (KdgM) CEJ55_07830 PF00589 Phage integrase family CEJ55_07835 PF00589 Phage integrase family CEJ55_07845 PF00419 Fimbrial protein CEJ55_07850 PF00419 Fimbrial protein CEJ55_07855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_07855 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_07860 PF00577 Outer membrane usher protein CEJ55_07860 PF13953 PapC C-terminal domain CEJ55_07860 PF13954 PapC N-terminal domain CEJ55_07865 PF00419 Fimbrial protein CEJ55_07875 PF00419 Fimbrial protein CEJ55_07875 PF09160 FimH, mannose binding CEJ55_07880 PF02447 CEJ55_07880 CEJ55_07890 PF03786 D-mannonate dehydratase (UxuA) CEJ55_07895 PF01232 Mannitol dehydrogenase Rossmann domain CEJ55_07895 PF08125 Mannitol dehydrogenase C-terminal domain CEJ55_07905 PF00392 Bacterial regulatory proteins, gntR family CEJ55_07905 PF07729 FCD domain CEJ55_07910 PF10887 CEJ55_07910 CEJ55_07925 PF04965 Gene 25-like lysozyme CEJ55_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_07930 PF03466 LysR substrate binding domain CEJ55_07935 PF01979 Amidohydrolase family CEJ55_07940 PF07670 Nucleoside recognition CEJ55_07945 PF07670 Nucleoside recognition CEJ55_07955 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CEJ55_07960 PF06779 CEJ55_07960 CEJ55_07965 PF06977 SdiA-regulated CEJ55_07970 PF11823 CEJ55_07970 CEJ55_07975 PF01869 BadF/BadG/BcrA/BcrD ATPase family CEJ55_07980 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CEJ55_07985 PF04286 CEJ55_07985 CEJ55_07990 PF07690 Major Facilitator Superfamily CEJ55_08000 PF04754 CEJ55_08000 CEJ55_08005 PF00155 Aminotransferase class I and II CEJ55_08005 PF00392 Bacterial regulatory proteins, gntR family CEJ55_08010 PF06568 CEJ55_08010 CEJ55_08015 PF01804 Penicillin amidase CEJ55_08020 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEJ55_08020 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEJ55_08025 PF04328 CEJ55_08025 CEJ55_08030 PF02554 CEJ55_08030 CEJ55_08030 PF13722 CEJ55_08030 CEJ55_08040 PF01613 Flavin reductase like domain CEJ55_08045 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CEJ55_08045 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CEJ55_08050 PF07883 Cupin domain CEJ55_08050 PF12833 Helix-turn-helix domain CEJ55_08055 PF07690 Major Facilitator Superfamily CEJ55_08060 PF03328 HpcH/HpaI aldolase/citrate lyase family CEJ55_08065 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEJ55_08070 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CEJ55_08075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEJ55_08080 PF00171 Aldehyde dehydrogenase family CEJ55_08085 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEJ55_08090 PF01047 MarR family CEJ55_08095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ55_08095 PF00672 HAMP domain CEJ55_08095 PF02203 Tar ligand binding domain homologue CEJ55_08100 PF07690 Major Facilitator Superfamily CEJ55_08105 PF00392 Bacterial regulatory proteins, gntR family CEJ55_08105 PF07729 FCD domain CEJ55_08110 PF00107 Zinc-binding dehydrogenase CEJ55_08110 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_08115 PF00884 Sulfatase CEJ55_08120 PF10696 CEJ55_08120 CEJ55_08125 PF01695 IstB-like ATP binding protein CEJ55_08135 PF12821 CEJ55_08135 CEJ55_08140 PF06738 CEJ55_08140 CEJ55_08145 PF00196 Bacterial regulatory proteins, luxR family CEJ55_08150 PF00196 Bacterial regulatory proteins, luxR family CEJ55_08155 PF06276 Ferric iron reductase FhuF-like transporter CEJ55_08155 PF11575 CEJ55_08155 CEJ55_08160 PF07256 CEJ55_08160 CEJ55_08180 PF05175 Methyltransferase small domain CEJ55_08180 PF08468 Methyltransferase small domain N-terminal CEJ55_08185 PF03603 DNA polymerase III psi subunit CEJ55_08190 PF00583 Acetyltransferase (GNAT) family CEJ55_08195 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_08200 PF00009 Elongation factor Tu GTP binding domain CEJ55_08200 PF03144 Elongation factor Tu domain 2 CEJ55_08200 PF16658 CEJ55_08200 CEJ55_08205 PF04972 BON domain CEJ55_08210 PF07043 CEJ55_08210 CEJ55_08215 PF01734 Patatin-like phospholipase CEJ55_08220 PF01026 TatD related DNase CEJ55_08225 PF04055 Radical SAM superfamily CEJ55_08225 PF13353 4Fe-4S single cluster domain CEJ55_08230 PF11230 CEJ55_08230 CEJ55_08235 PF01791 DeoC/LacD family aldolase CEJ55_08240 PF00591 Glycosyl transferase family, a/b domain CEJ55_08240 PF02885 Glycosyl transferase family, helical bundle domain CEJ55_08240 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEJ55_08245 PF01676 Metalloenzyme superfamily CEJ55_08250 PF01048 Phosphorylase superfamily CEJ55_08255 PF03099 Biotin/lipoate A/B protein ligase family CEJ55_08255 PF10437 Bacterial lipoate protein ligase C-terminus CEJ55_08260 PF10144 CEJ55_08260 CEJ55_08265 PF12710 haloacid dehalogenase-like hydrolase CEJ55_08270 PF13481 AAA domain CEJ55_08270 PF13541 Subunit ChlI of Mg-chelatase CEJ55_08275 PF01381 Helix-turn-helix CEJ55_08275 PF13521 AAA domain CEJ55_08280 PF00005 ABC transporter CEJ55_08280 PF12848 ABC transporter CEJ55_08290 PF01464 Transglycosylase SLT domain CEJ55_08290 PF14718 Soluble lytic murein transglycosylase L domain CEJ55_08295 PF01371 Trp repressor protein CEJ55_08300 PF01931 Protein of unknown function DUF84 CEJ55_08305 PF00300 Histidine phosphatase superfamily (branch 1) CEJ55_08315 PF05981 CEJ55_08315 CEJ55_08320 PF00072 Response regulator receiver domain CEJ55_08320 PF00486 Transcriptional regulatory protein, C terminal CEJ55_08325 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_08330 PF06123 CEJ55_08330 CEJ55_08335 PF00072 Response regulator receiver domain CEJ55_08335 PF00486 Transcriptional regulatory protein, C terminal CEJ55_08345 PF00588 SpoU rRNA Methylase family CEJ55_08350 PF08254 CEJ55_08350 CEJ55_08355 PF00696 Amino acid kinase family CEJ55_08355 PF00742 Homoserine dehydrogenase CEJ55_08355 PF01842 ACT domain CEJ55_08355 PF03447 Homoserine dehydrogenase, NAD binding domain CEJ55_08355 PF13840 ACT domain CEJ55_08360 PF00288 GHMP kinases N terminal domain CEJ55_08360 PF08544 GHMP kinases C terminal CEJ55_08365 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_08365 PF14821 Threonine synthase N terminus CEJ55_08370 PF10697 CEJ55_08370 CEJ55_08375 PF03883 CEJ55_08375 CEJ55_08380 PF01235 CEJ55_08380 CEJ55_08385 PF00923 Transaldolase CEJ55_08390 PF00994 Probable molybdopterin binding domain CEJ55_08395 PF01184 CEJ55_08395 CEJ55_08400 PF03981 CEJ55_08400 CEJ55_08400 PF13099 CEJ55_08400 CEJ55_08405 PF10807 CEJ55_08405 CEJ55_08410 PF00012 Hsp70 protein CEJ55_08415 PF00226 DnaJ domain CEJ55_08415 PF00684 DnaJ central domain CEJ55_08415 PF01556 DnaJ C terminal domain CEJ55_08420 PF01848 CEJ55_08420 CEJ55_08425 PF06965 Na+/H+ antiporter 1 CEJ55_08430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_08430 PF03466 LysR substrate binding domain CEJ55_08450 PF01649 Ribosomal protein S20 CEJ55_08455 PF10837 CEJ55_08455 CEJ55_08460 PF01687 Riboflavin kinase CEJ55_08460 PF06574 FAD synthetase CEJ55_08465 PF00133 tRNA synthetases class I (I, L, M and V) CEJ55_08465 PF06827 Zinc finger found in FPG and IleRS CEJ55_08465 PF08264 Anticodon-binding domain of tRNA CEJ55_08470 PF01252 CEJ55_08470 CEJ55_08475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ55_08480 PF02401 LytB protein CEJ55_08485 PF01156 Inosine-uridine preferring nucleoside hydrolase CEJ55_08490 PF01113 Dihydrodipicolinate reductase, N-terminus CEJ55_08490 PF05173 Dihydrodipicolinate reductase, C-terminus CEJ55_08500 PF00117 Glutamine amidotransferase class-I CEJ55_08500 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CEJ55_08505 PF02142 MGS-like domain CEJ55_08505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEJ55_08505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEJ55_08515 PF07180 Protein of unknown function (DUF1401) CEJ55_08520 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_08525 PF00378 Enoyl-CoA hydratase/isomerase family CEJ55_08530 PF00501 AMP-binding enzyme CEJ55_08530 PF13193 AMP-binding enzyme C-terminal domain CEJ55_08535 PF02515 CoA-transferase family III CEJ55_08540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEJ55_08540 PF02770 Acyl-CoA dehydrogenase, middle domain CEJ55_08540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEJ55_08545 PF02028 BCCT family transporter CEJ55_08550 PF01012 Electron transfer flavoprotein domain CEJ55_08555 PF00766 Electron transfer flavoprotein FAD-binding domain CEJ55_08555 PF01012 Electron transfer flavoprotein domain CEJ55_08560 PF01494 FAD binding domain CEJ55_08570 PF00083 Sugar (and other) transporter CEJ55_08575 PF02525 Flavodoxin-like fold CEJ55_08580 PF00999 Sodium/hydrogen exchanger family CEJ55_08580 PF02254 TrkA-N domain CEJ55_08585 PF00186 Dihydrofolate reductase CEJ55_08590 PF00149 Calcineurin-like phosphoesterase CEJ55_08595 PF04379 Protein of unknown function (DUF525) CEJ55_08600 PF00398 Ribosomal RNA adenine dimethylase CEJ55_08605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEJ55_08610 PF00639 PPIC-type PPIASE domain CEJ55_08610 PF09312 SurA N-terminal domain CEJ55_08610 PF13616 PPIC-type PPIASE domain CEJ55_08615 PF03968 OstA-like protein CEJ55_08615 PF04453 Organic solvent tolerance protein CEJ55_08620 PF00226 DnaJ domain CEJ55_08620 PF05099 Tellurite resistance protein TerB CEJ55_08625 PF00849 RNA pseudouridylate synthase CEJ55_08630 PF00176 SNF2 family N-terminal domain CEJ55_08630 PF00271 Helicase conserved C-terminal domain CEJ55_08630 PF12137 RNA polymerase recycling family C-terminal CEJ55_08635 PF00136 DNA polymerase family B CEJ55_08635 PF03104 DNA polymerase family B, exonuclease domain CEJ55_08640 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ55_08645 PF02610 L-arabinose isomerase CEJ55_08645 PF11762 L-arabinose isomerase C-terminal domain CEJ55_08650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_08660 PF02311 AraC-like ligand binding domain CEJ55_08660 PF12833 Helix-turn-helix domain CEJ55_08665 PF09335 CEJ55_08665 CEJ55_08670 PF00005 ABC transporter CEJ55_08675 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_08680 PF13343 Bacterial extracellular solute-binding protein CEJ55_08685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_08685 PF12793 CEJ55_08685 CEJ55_08690 PF15894 CEJ55_08690 CEJ55_08695 PF07690 Major Facilitator Superfamily CEJ55_08700 PF00694 Aconitase C-terminal domain CEJ55_08705 PF00330 Aconitase family (aconitate hydratase) CEJ55_08710 PF00180 Isocitrate/isopropylmalate dehydrogenase CEJ55_08715 PF00682 HMGL-like CEJ55_08715 PF08502 LeuA allosteric (dimerisation) domain CEJ55_08720 PF08054 CEJ55_08720 CEJ55_08725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_08725 PF03466 LysR substrate binding domain CEJ55_08730 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ55_08730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_08730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ55_08735 PF10369 Small subunit of acetolactate synthase CEJ55_08735 PF13710 ACT domain CEJ55_08745 PF00356 Bacterial regulatory proteins, lacI family CEJ55_08745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ55_08755 PF02381 MraZ protein CEJ55_08760 PF01795 MraW methylase family CEJ55_08765 PF04999 CEJ55_08765 CEJ55_08770 PF00905 Penicillin binding protein transpeptidase domain CEJ55_08770 PF03717 Penicillin-binding Protein dimerisation domain CEJ55_08775 PF01225 Mur ligase family, catalytic domain CEJ55_08775 PF02875 Mur ligase family, glutamate ligase domain CEJ55_08775 PF08245 Mur ligase middle domain CEJ55_08780 PF01225 Mur ligase family, catalytic domain CEJ55_08780 PF02875 Mur ligase family, glutamate ligase domain CEJ55_08780 PF08245 Mur ligase middle domain CEJ55_08785 PF00953 Glycosyl transferase family 4 CEJ55_08785 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CEJ55_08790 PF02875 Mur ligase family, glutamate ligase domain CEJ55_08790 PF08245 Mur ligase middle domain CEJ55_08795 PF01098 CEJ55_08795 CEJ55_08800 PF03033 Glycosyltransferase family 28 N-terminal domain CEJ55_08800 PF04101 Glycosyltransferase family 28 C-terminal domain CEJ55_08805 PF01225 Mur ligase family, catalytic domain CEJ55_08805 PF02875 Mur ligase family, glutamate ligase domain CEJ55_08805 PF08245 Mur ligase middle domain CEJ55_08810 PF01820 D-ala D-ala ligase N-terminus CEJ55_08810 PF07478 D-ala D-ala ligase C-terminus CEJ55_08815 PF03799 Cell division protein FtsQ CEJ55_08815 PF08478 POTRA domain, FtsQ-type CEJ55_08820 PF02491 SHS2 domain inserted in FTSA CEJ55_08820 PF14450 Cell division protein FtsA CEJ55_08825 PF00091 Tubulin/FtsZ family, GTPase domain CEJ55_08825 PF12327 FtsZ family, C-terminal domain CEJ55_08830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CEJ55_08835 PF06558 CEJ55_08835 CEJ55_08840 PF01043 SecA preprotein cross-linking domain CEJ55_08840 PF02810 SEC-C motif CEJ55_08840 PF07516 SecA Wing and Scaffold domain CEJ55_08840 PF07517 SecA DEAD-like domain CEJ55_08845 PF00293 NUDIX domain CEJ55_08850 PF03884 Domain of unknown function (DUF329) CEJ55_08855 PF07072 Protein of unknown function (DUF1342) CEJ55_08860 PF01121 Dephospho-CoA kinase CEJ55_08865 PF00478 IMP dehydrogenase / GMP reductase domain CEJ55_08870 PF00482 Type II secretion system (T2SS), protein F CEJ55_08875 PF00437 Type II/IV secretion system protein CEJ55_08875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEJ55_08880 PF07963 Prokaryotic N-terminal methylation motif CEJ55_08890 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEJ55_08890 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEJ55_08895 PF01510 N-acetylmuramoyl-L-alanine amidase CEJ55_08900 PF17113 CEJ55_08900 CEJ55_08905 PF00324 Amino acid permease CEJ55_08910 PF00392 Bacterial regulatory proteins, gntR family CEJ55_08910 PF07729 FCD domain CEJ55_08920 PF00456 Transketolase, thiamine diphosphate binding domain CEJ55_08925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEJ55_08925 PF00364 Biotin-requiring enzyme CEJ55_08925 PF02817 e3 binding domain CEJ55_08930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ55_08930 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_08935 PF11737 CEJ55_08935 CEJ55_08945 PF00330 Aconitase family (aconitate hydratase) CEJ55_08945 PF06434 Aconitate hydratase 2 N-terminus CEJ55_08945 PF11791 Aconitate B N-terminal domain CEJ55_08950 PF06062 CEJ55_08950 CEJ55_08955 PF02675 S-adenosylmethionine decarboxylase CEJ55_08960 PF01564 Spermine/spermidine synthase CEJ55_08960 PF17284 CEJ55_08960 CEJ55_08965 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) CEJ55_08970 PF00394 Multicopper oxidase CEJ55_08970 PF07731 Multicopper oxidase CEJ55_08970 PF07732 Multicopper oxidase CEJ55_08975 PF01011 PQQ enzyme repeat CEJ55_08980 PF00156 Phosphoribosyl transferase domain CEJ55_08985 PF00484 Carbonic anhydrase CEJ55_08990 PF00005 ABC transporter CEJ55_08995 PF01061 CEJ55_08995 CEJ55_09000 PF03610 PTS system fructose IIA component CEJ55_09005 PF01522 Polysaccharide deacetylase CEJ55_09010 PF02261 Aspartate decarboxylase CEJ55_09020 PF04754 CEJ55_09020 CEJ55_09025 PF02569 Pantoate-beta-alanine ligase CEJ55_09030 PF02548 Ketopantoate hydroxymethyltransferase CEJ55_09035 PF00419 Fimbrial protein CEJ55_09040 PF00419 Fimbrial protein CEJ55_09045 PF00419 Fimbrial protein CEJ55_09050 PF00419 Fimbrial protein CEJ55_09055 PF00577 Outer membrane usher protein CEJ55_09055 PF13953 PapC C-terminal domain CEJ55_09055 PF13954 PapC N-terminal domain CEJ55_09060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_09060 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_09065 PF00419 Fimbrial protein CEJ55_09070 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEJ55_09075 PF01743 Poly A polymerase head domain CEJ55_09075 PF12626 Polymerase A arginine-rich C-terminus CEJ55_09075 PF12627 Probable RNA and SrmB- binding site of polymerase A CEJ55_09080 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEJ55_09085 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEJ55_09090 PF03749 Sugar fermentation stimulation protein CEJ55_09095 PF02834 LigT like Phosphoesterase CEJ55_09100 PF00270 DEAD/DEAH box helicase CEJ55_09100 PF00271 Helicase conserved C-terminal domain CEJ55_09100 PF04408 Helicase associated domain (HA2) CEJ55_09100 PF08482 CEJ55_09100 CEJ55_09110 PF00905 Penicillin binding protein transpeptidase domain CEJ55_09110 PF00912 Transglycosylase CEJ55_09110 PF14812 CEJ55_09110 CEJ55_09110 PF14814 Bifunctional transglycosylase second domain CEJ55_09115 PF00593 TonB dependent receptor CEJ55_09115 PF07715 TonB-dependent Receptor Plug Domain CEJ55_09120 PF00005 ABC transporter CEJ55_09125 PF01497 Periplasmic binding protein CEJ55_09130 PF01032 FecCD transport family CEJ55_09135 PF00202 Aminotransferase class-III CEJ55_09140 PF00654 Voltage gated chloride channel CEJ55_09145 PF01521 Iron-sulphur cluster biosynthesis CEJ55_09150 PF03458 CEJ55_09150 CEJ55_09155 PF01497 Periplasmic binding protein CEJ55_09160 PF01048 Phosphorylase superfamily CEJ55_09165 PF01966 HD domain CEJ55_09175 PF00595 PDZ domain (Also known as DHR or GLGF) CEJ55_09175 PF13365 Trypsin-like peptidase domain CEJ55_09180 PF05651 CEJ55_09180 CEJ55_09180 PF13556 PucR C-terminal helix-turn-helix domain CEJ55_09185 PF11944 CEJ55_09185 CEJ55_09190 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_09190 PF14602 Hexapeptide repeat of succinyl-transferase CEJ55_09190 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CEJ55_09195 PF01842 ACT domain CEJ55_09195 PF01909 Nucleotidyltransferase domain CEJ55_09195 PF01966 HD domain CEJ55_09195 PF08335 GlnD PII-uridylyltransferase CEJ55_09200 PF00557 Metallopeptidase family M24 CEJ55_09210 PF00318 Ribosomal protein S2 CEJ55_09220 PF00889 Elongation factor TS CEJ55_09225 PF00696 Amino acid kinase family CEJ55_09230 PF01765 Ribosome recycling factor CEJ55_09235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CEJ55_09235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CEJ55_09235 PF13288 DXP reductoisomerase C-terminal domain CEJ55_09240 PF01255 Putative undecaprenyl diphosphate synthase CEJ55_09245 PF01148 Cytidylyltransferase family CEJ55_09250 PF00595 PDZ domain (Also known as DHR or GLGF) CEJ55_09250 PF02163 Peptidase family M50 CEJ55_09255 PF01103 Surface antigen CEJ55_09255 PF07244 Surface antigen variable number repeat CEJ55_09260 PF03938 Outer membrane protein (OmpH-like) CEJ55_09265 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_09265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEJ55_09265 PF14602 Hexapeptide repeat of succinyl-transferase CEJ55_09270 PF07977 FabA-like domain CEJ55_09275 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_09275 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CEJ55_09280 PF02684 CEJ55_09280 CEJ55_09285 PF01351 Ribonuclease HII CEJ55_09290 PF01336 OB-fold nucleic acid binding domain CEJ55_09290 PF02811 PHP domain CEJ55_09290 PF07733 Bacterial DNA polymerase III alpha subunit CEJ55_09290 PF14579 Helix-hairpin-helix motif CEJ55_09295 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CEJ55_09300 PF01276 Orn/Lys/Arg decarboxylase, major domain CEJ55_09300 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEJ55_09300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEJ55_09305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEJ55_09310 PF01171 PP-loop family CEJ55_09310 PF09179 TilS substrate binding domain CEJ55_09310 PF11734 TilS substrate C-terminal domain CEJ55_09315 PF07073 Modulator of Rho-dependent transcription termination (ROF) CEJ55_09320 PF06786 CEJ55_09320 CEJ55_09325 PF07152 YaeQ protein CEJ55_09330 PF00472 RF-1 domain CEJ55_09335 PF04170 NlpE N-terminal domain CEJ55_09335 PF17185 CEJ55_09335 CEJ55_09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEJ55_09345 PF03129 Anticodon binding domain CEJ55_09345 PF04073 Aminoacyl-tRNA editing domain CEJ55_09350 PF01980 Uncharacterised protein family UPF0066 CEJ55_09355 PF16358 CEJ55_09355 CEJ55_09360 PF03180 NLPA lipoprotein CEJ55_09365 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_09370 PF00005 ABC transporter CEJ55_09370 PF09383 NIL domain CEJ55_09375 PF13242 HAD-hyrolase-like CEJ55_09410 PF00248 Aldo/keto reductase family CEJ55_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_09415 PF03466 LysR substrate binding domain CEJ55_09420 PF03372 Endonuclease/Exonuclease/phosphatase family CEJ55_09425 PF08241 Methyltransferase domain CEJ55_09430 PF01464 Transglycosylase SLT domain CEJ55_09430 PF01476 LysM domain CEJ55_09435 PF00753 Metallo-beta-lactamase superfamily CEJ55_09435 PF16123 CEJ55_09435 CEJ55_09440 PF08241 Methyltransferase domain CEJ55_09445 PF00075 RNase H CEJ55_09450 PF00929 Exonuclease CEJ55_09475 PF05638 Protein of unknown function (DUF796) CEJ55_09480 PF06812 CEJ55_09480 CEJ55_09480 PF12486 CEJ55_09480 CEJ55_09485 PF06744 CEJ55_09485 CEJ55_09485 PF06761 CEJ55_09485 CEJ55_09485 PF14331 CEJ55_09485 CEJ55_09490 PF16989 CEJ55_09490 CEJ55_09495 PF11319 CEJ55_09495 CEJ55_09500 PF00004 ATPase family associated with various cellular activities (AAA) CEJ55_09500 PF07724 AAA domain (Cdc48 subfamily) CEJ55_09500 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ55_09505 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) CEJ55_09510 PF05936 CEJ55_09510 CEJ55_09515 PF12790 Type VI secretion lipoprotein CEJ55_09525 PF06996 CEJ55_09525 CEJ55_09530 PF05947 CEJ55_09530 CEJ55_09535 PF04965 Gene 25-like lysozyme CEJ55_09540 PF05943 CEJ55_09540 CEJ55_09550 PF05591 CEJ55_09550 CEJ55_09555 PF05638 Protein of unknown function (DUF796) CEJ55_09565 PF05954 Phage late control gene D protein (GPD) CEJ55_09575 PF01609 Transposase DDE domain CEJ55_09575 PF13808 CEJ55_09575 CEJ55_09585 PF13108 CEJ55_09585 CEJ55_09615 PF00795 Carbon-nitrogen hydrolase CEJ55_09620 PF08816 Inhibitor of vertebrate lysozyme (Ivy) CEJ55_09625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEJ55_09625 PF02770 Acyl-CoA dehydrogenase, middle domain CEJ55_09625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEJ55_09625 PF09317 CEJ55_09625 CEJ55_09630 PF13580 SIS domain CEJ55_09635 PF13230 Glutamine amidotransferases class-II CEJ55_09640 PF03734 L,D-transpeptidase catalytic domain CEJ55_09645 PF15738 CEJ55_09645 CEJ55_09650 PF04221 RelB antitoxin CEJ55_09655 PF00877 NlpC/P60 family CEJ55_09660 PF05534 CEJ55_09660 CEJ55_09665 PF07927 YcfA-like protein CEJ55_09670 PF00771 FHIPEP family CEJ55_09675 PF01312 FlhB HrpN YscU SpaS Family CEJ55_09680 PF01311 CEJ55_09680 CEJ55_09685 PF01313 CEJ55_09685 CEJ55_09690 PF00813 CEJ55_09690 CEJ55_09695 PF01052 Surface presentation of antigens (SPOA) CEJ55_09700 PF01052 Surface presentation of antigens (SPOA) CEJ55_09705 PF00158 Sigma-54 interaction domain CEJ55_09705 PF02954 Bacterial regulatory protein, Fis family CEJ55_09710 PF02049 CEJ55_09710 CEJ55_09715 PF01514 Secretory protein of YscJ/FliF family CEJ55_09715 PF08345 CEJ55_09715 CEJ55_09720 PF01706 FliG C-terminal domain CEJ55_09720 PF14841 FliG middle domain CEJ55_09720 PF14842 FliG N-terminal domain CEJ55_09725 PF02108 CEJ55_09725 CEJ55_09730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ55_09735 PF02050 Flagellar FliJ protein CEJ55_09740 PF01467 Cytidylyltransferase CEJ55_09745 PF01548 CEJ55_09745 CEJ55_09745 PF02371 CEJ55_09745 CEJ55_09755 PF00535 Glycosyl transferase family 2 CEJ55_09765 PF05130 FlgN protein CEJ55_09770 PF04316 Anti-sigma-28 factor, FlgM CEJ55_09775 PF13144 SAF-like CEJ55_09785 PF00460 Flagella basal body rod protein CEJ55_09785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_09790 PF03963 CEJ55_09790 CEJ55_09790 PF13861 FlgD Tudor-like domain CEJ55_09795 PF00460 Flagella basal body rod protein CEJ55_09795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_09795 PF07559 Flagellar basal body protein FlaE CEJ55_09800 PF00460 Flagella basal body rod protein CEJ55_09800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_09805 PF00460 Flagella basal body rod protein CEJ55_09805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_09810 PF02107 CEJ55_09810 CEJ55_09815 PF02119 CEJ55_09815 CEJ55_09820 PF10135 CEJ55_09820 CEJ55_09825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_09830 PF00669 Bacterial flagellin N-terminal helical region CEJ55_09840 PF00486 Transcriptional regulatory protein, C terminal CEJ55_09845 PF00669 Bacterial flagellin N-terminal helical region CEJ55_09845 PF00700 Bacterial flagellin C-terminal helical region CEJ55_09855 PF02465 CEJ55_09855 CEJ55_09855 PF07195 CEJ55_09855 CEJ55_09860 PF02561 Flagellar protein FliS CEJ55_09870 PF02120 Flagellar hook-length control protein FliK CEJ55_09875 PF03748 CEJ55_09875 CEJ55_09880 PF04542 Sigma-70 region 2 CEJ55_09880 PF04545 Sigma-70, region 4 CEJ55_09885 PF01618 CEJ55_09885 CEJ55_09890 PF00691 OmpA family CEJ55_09890 PF13677 CEJ55_09890 CEJ55_09895 PF00817 impB/mucB/samB family CEJ55_09895 PF11798 IMS family HHH motif CEJ55_09895 PF11799 impB/mucB/samB family C-terminal domain CEJ55_09900 PF13673 Acetyltransferase (GNAT) domain CEJ55_09910 PF01139 tRNA-splicing ligase RtcB CEJ55_09915 PF00472 RF-1 domain CEJ55_09920 PF01546 Peptidase family M20/M25/M40 CEJ55_09920 PF07687 Peptidase dimerisation domain CEJ55_09925 PF00156 Phosphoribosyl transferase domain CEJ55_09930 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CEJ55_09935 PF07417 Transcriptional regulator Crl CEJ55_09940 PF00267 Gram-negative porin CEJ55_09945 PF00696 Amino acid kinase family CEJ55_09945 PF01472 PUA domain CEJ55_09950 PF00171 Aldehyde dehydrogenase family CEJ55_09960 PF03466 LysR substrate binding domain CEJ55_09965 PF02625 XdhC and CoxI family CEJ55_09965 PF13478 XdhC Rossmann domain CEJ55_09970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEJ55_09970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEJ55_09975 PF00941 FAD binding domain in molybdopterin dehydrogenase CEJ55_09975 PF03450 CO dehydrogenase flavoprotein C-terminal domain CEJ55_09980 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_09980 PF01799 [2Fe-2S] binding domain CEJ55_09990 PF07274 CEJ55_09990 CEJ55_10000 PF03692 CEJ55_10000 CEJ55_10015 PF15976 CEJ55_10015 CEJ55_10015 PF16967 CEJ55_10015 CEJ55_10025 PF16449 CEJ55_10025 CEJ55_10030 PF00196 Bacterial regulatory proteins, luxR family CEJ55_10045 PF00444 Ribosomal protein L36 CEJ55_10050 PF01197 Ribosomal protein L31 CEJ55_10065 PF02369 Bacterial Ig-like domain (group 1) CEJ55_10065 PF09134 Invasin, domain 3 CEJ55_10065 PF11924 Protein of unknown function (DUF3442) CEJ55_10070 PF06445 GyrI-like small molecule binding domain CEJ55_10070 PF12833 Helix-turn-helix domain CEJ55_10075 PF04224 CEJ55_10075 CEJ55_10080 PF07338 Protein of unknown function (DUF1471) CEJ55_10085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ55_10085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_10090 PF12833 Helix-turn-helix domain CEJ55_10090 PF12852 Cupin CEJ55_10095 PF02754 CEJ55_10095 CEJ55_10100 PF02589 Uncharacterised ACR, YkgG family COG1556 CEJ55_10100 PF11870 CEJ55_10100 CEJ55_10100 PF13183 4Fe-4S dicluster domain CEJ55_10105 PF02589 Uncharacterised ACR, YkgG family COG1556 CEJ55_10125 PF00732 GMC oxidoreductase CEJ55_10125 PF05199 GMC oxidoreductase CEJ55_10130 PF00171 Aldehyde dehydrogenase family CEJ55_10135 PF00440 Bacterial regulatory proteins, tetR family CEJ55_10135 PF13977 Bacterial transcriptional repressor CEJ55_10145 PF02028 BCCT family transporter CEJ55_10150 PF03797 Autotransporter beta-domain CEJ55_10150 PF13018 CEJ55_10150 CEJ55_10155 PF00196 Bacterial regulatory proteins, luxR family CEJ55_10155 PF00563 EAL domain CEJ55_10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_10160 PF03466 LysR substrate binding domain CEJ55_10165 PF06496 CEJ55_10165 CEJ55_10175 PF12796 Ankyrin repeats (3 copies) CEJ55_10175 PF13637 Ankyrin repeats (many copies) CEJ55_10180 PF11392 CEJ55_10180 CEJ55_10185 PF00549 CoA-ligase CEJ55_10185 PF02629 CoA binding domain CEJ55_10190 PF06545 Protein of unknown function (DUF1116) CEJ55_10195 PF00696 Amino acid kinase family CEJ55_10200 PF07969 Amidohydrolase family CEJ55_10205 PF04266 ASCH domain CEJ55_10210 PF13407 Periplasmic binding protein domain CEJ55_10215 PF00005 ABC transporter CEJ55_10220 PF02653 CEJ55_10220 CEJ55_10225 PF02653 CEJ55_10225 CEJ55_10230 PF00107 Zinc-binding dehydrogenase CEJ55_10230 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_10245 PF01810 CEJ55_10245 CEJ55_10250 PF07338 Protein of unknown function (DUF1471) CEJ55_10255 PF00158 Sigma-54 interaction domain CEJ55_10255 PF02954 Bacterial regulatory protein, Fis family CEJ55_10255 PF06506 Propionate catabolism activator CEJ55_10260 PF13714 Phosphoenolpyruvate phosphomutase CEJ55_10265 PF00285 Citrate synthase CEJ55_10270 PF03972 MmgE/PrpD family CEJ55_10275 PF00501 AMP-binding enzyme CEJ55_10275 PF13193 AMP-binding enzyme C-terminal domain CEJ55_10275 PF16177 CEJ55_10275 CEJ55_10280 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CEJ55_10285 PF07969 Amidohydrolase family CEJ55_10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_10290 PF03466 LysR substrate binding domain CEJ55_10295 PF00484 Carbonic anhydrase CEJ55_10300 PF02560 Cyanate lyase C-terminal domain CEJ55_10305 PF07690 Major Facilitator Superfamily CEJ55_10310 PF01306 LacY proton/sugar symporter CEJ55_10315 PF00703 Glycosyl hydrolases family 2 CEJ55_10315 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEJ55_10315 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEJ55_10315 PF02929 Beta galactosidase small chain CEJ55_10315 PF16353 CEJ55_10315 CEJ55_10325 PF00356 Bacterial regulatory proteins, lacI family CEJ55_10325 PF13377 Periplasmic binding protein-like domain CEJ55_10330 PF01614 Bacterial transcriptional regulator CEJ55_10330 PF09339 IclR helix-turn-helix domain CEJ55_10335 PF01494 FAD binding domain CEJ55_10340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEJ55_10345 PF00561 alpha/beta hydrolase fold CEJ55_10350 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEJ55_10355 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ55_10355 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CEJ55_10360 PF00682 HMGL-like CEJ55_10360 PF07836 DmpG-like communication domain CEJ55_10365 PF07690 Major Facilitator Superfamily CEJ55_10370 PF09831 CEJ55_10370 CEJ55_10375 PF00756 Putative esterase CEJ55_10380 PF00107 Zinc-binding dehydrogenase CEJ55_10380 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_10385 PF02583 Metal-sensitive transcriptional repressor CEJ55_10395 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_10400 PF00535 Glycosyl transferase family 2 CEJ55_10405 PF02585 GlcNAc-PI de-N-acetylase CEJ55_10415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEJ55_10420 PF00005 ABC transporter CEJ55_10425 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_10430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CEJ55_10435 PF00490 Delta-aminolevulinic acid dehydratase CEJ55_10445 PF03212 Pertactin CEJ55_10445 PF03797 Autotransporter beta-domain CEJ55_10450 PF15977 CEJ55_10450 CEJ55_10455 PF00144 Beta-lactamase CEJ55_10465 PF05992 CEJ55_10465 CEJ55_10470 PF07759 CEJ55_10470 CEJ55_10475 PF10954 CEJ55_10475 CEJ55_10480 PF10953 CEJ55_10480 CEJ55_10485 PF01820 D-ala D-ala ligase N-terminus CEJ55_10485 PF07478 D-ala D-ala ligase C-terminus CEJ55_10495 PF10796 CEJ55_10495 CEJ55_10500 PF00245 Alkaline phosphatase CEJ55_10505 PF07769 CEJ55_10505 CEJ55_10510 PF00990 GGDEF domain CEJ55_10510 PF05230 CEJ55_10510 CEJ55_10515 PF03807 NADP oxidoreductase coenzyme F420-dependent CEJ55_10515 PF14748 Pyrroline-5-carboxylate reductase dimerisation CEJ55_10520 PF02639 CEJ55_10520 CEJ55_10525 PF01202 Shikimate kinase CEJ55_10530 PF16362 CEJ55_10530 CEJ55_10540 PF07302 CEJ55_10540 CEJ55_10545 PF06865 Protein of unknown function (DUF1255) CEJ55_10555 PF10971 CEJ55_10555 CEJ55_10560 PF04381 Putative exonuclease, RdgC CEJ55_10565 PF00480 ROK family CEJ55_10570 PF07690 Major Facilitator Superfamily CEJ55_10575 PF13555 P-loop containing region of AAA domain CEJ55_10575 PF13558 Putative exonuclease SbcCD, C subunit CEJ55_10580 PF00149 Calcineurin-like phosphoesterase CEJ55_10580 PF12320 Type 5 capsule protein repressor C-terminal domain CEJ55_10585 PF00072 Response regulator receiver domain CEJ55_10585 PF00486 Transcriptional regulatory protein, C terminal CEJ55_10590 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_10590 PF00989 PAS fold CEJ55_10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_10590 PF11808 CEJ55_10590 CEJ55_10595 PF05525 CEJ55_10595 CEJ55_10600 PF00324 Amino acid permease CEJ55_10605 PF00128 Alpha amylase, catalytic domain CEJ55_10605 PF02903 Alpha amylase, N-terminal ig-like domain CEJ55_10610 PF04336 CEJ55_10610 CEJ55_10615 PF02547 Queuosine biosynthesis protein CEJ55_10620 PF01702 Queuine tRNA-ribosyltransferase CEJ55_10625 PF02699 Preprotein translocase subunit CEJ55_10630 PF02355 Protein export membrane protein CEJ55_10630 PF07549 SecD/SecF GG Motif CEJ55_10630 PF13721 SecD export protein N-terminal TM region CEJ55_10635 PF02355 Protein export membrane protein CEJ55_10635 PF07549 SecD/SecF GG Motif CEJ55_10640 PF01844 HNH endonuclease CEJ55_10645 PF03502 Nucleoside-specific channel-forming protein, Tsx CEJ55_10650 PF11622 Protein of unknown function (DUF3251) CEJ55_10655 PF03477 ATP cone domain CEJ55_10660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ55_10660 PF01872 RibD C-terminal domain CEJ55_10665 PF00885 6,7-dimethyl-8-ribityllumazine synthase CEJ55_10670 PF01029 NusB family CEJ55_10675 PF00586 AIR synthase related protein, N-terminal domain CEJ55_10675 PF02769 AIR synthase related protein, C-terminal domain CEJ55_10680 PF04608 Phosphatidylglycerophosphatase A CEJ55_10685 PF00248 Aldo/keto reductase family CEJ55_10690 PF02779 Transketolase, pyrimidine binding domain CEJ55_10690 PF02780 Transketolase, C-terminal domain CEJ55_10690 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CEJ55_10695 PF00348 Polyprenyl synthetase CEJ55_10700 PF02609 Exonuclease VII small subunit CEJ55_10705 PF02568 Thiamine biosynthesis protein (ThiI) CEJ55_10705 PF02926 THUMP domain CEJ55_10710 PF01965 DJ-1/PfpI family CEJ55_10715 PF02558 Ketopantoate reductase PanE/ApbA CEJ55_10715 PF08546 Ketopantoate reductase PanE/ApbA C terminal CEJ55_10720 PF04461 Protein of unknown function (DUF520) CEJ55_10725 PF07690 Major Facilitator Superfamily CEJ55_10730 PF08238 Sel1 repeat CEJ55_10735 PF13508 Acetyltransferase (GNAT) domain CEJ55_10740 PF08681 Protein of unknown function (DUF1778) CEJ55_10745 PF01040 UbiA prenyltransferase family CEJ55_10750 PF03626 CEJ55_10750 CEJ55_10755 PF00510 Cytochrome c oxidase subunit III CEJ55_10760 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEJ55_10765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CEJ55_10765 PF06481 COX Aromatic Rich Motif CEJ55_10770 PF07690 Major Facilitator Superfamily CEJ55_10775 PF03923 CEJ55_10775 CEJ55_10775 PF08139 CEJ55_10775 CEJ55_10780 PF01722 BolA-like protein CEJ55_10790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ55_10790 PF05697 Bacterial trigger factor protein (TF) CEJ55_10790 PF05698 Bacterial trigger factor protein (TF) C-terminus CEJ55_10795 PF00574 Clp protease CEJ55_10800 PF06689 ClpX C4-type zinc finger CEJ55_10800 PF07724 AAA domain (Cdc48 subfamily) CEJ55_10800 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ55_10805 PF00004 ATPase family associated with various cellular activities (AAA) CEJ55_10805 PF02190 ATP-dependent protease La (LON) domain CEJ55_10805 PF05362 Lon protease (S16) C-terminal proteolytic domain CEJ55_10810 PF00216 Bacterial DNA-binding protein CEJ55_10815 PF13145 PPIC-type PPIASE domain CEJ55_10815 PF13624 SurA N-terminal domain CEJ55_10820 PF12836 Helix-hairpin-helix motif CEJ55_10825 PF13279 Thioesterase-like superfamily CEJ55_10830 PF06508 Queuosine biosynthesis protein QueC CEJ55_10835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_10835 PF12793 CEJ55_10835 CEJ55_10840 PF08282 haloacid dehalogenase-like hydrolase CEJ55_10845 PF01037 AsnC family CEJ55_10845 PF13404 AsnC-type helix-turn-helix domain CEJ55_10850 PF00005 ABC transporter CEJ55_10850 PF00664 ABC transporter transmembrane region CEJ55_10855 PF00005 ABC transporter CEJ55_10855 PF00664 ABC transporter transmembrane region CEJ55_10860 PF00543 Nitrogen regulatory protein P-II CEJ55_10865 PF00909 Ammonium Transporter Family CEJ55_10870 PF13622 Thioesterase-like superfamily CEJ55_10875 PF09619 Type III secretion system lipoprotein chaperone (YscW) CEJ55_10880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEJ55_10890 PF07237 Protein of unknown function (DUF1428) CEJ55_10895 PF00563 EAL domain CEJ55_10895 PF12792 CEJ55_10895 CEJ55_10900 PF10777 CEJ55_10900 CEJ55_10905 PF12464 Maltose acetyltransferase CEJ55_10905 PF14602 Hexapeptide repeat of succinyl-transferase CEJ55_10910 PF05321 Haemolysin expression modulating protein CEJ55_10915 PF10757 CEJ55_10915 CEJ55_10920 PF00873 AcrB/AcrD/AcrF family CEJ55_10925 PF00529 HlyD family secretion protein CEJ55_10925 PF16576 CEJ55_10925 CEJ55_10930 PF00440 Bacterial regulatory proteins, tetR family CEJ55_10930 PF08361 MAATS-type transcriptional repressor, C-terminal region CEJ55_10940 PF00924 Mechanosensitive ion channel CEJ55_10940 PF12794 CEJ55_10940 CEJ55_10940 PF12795 CEJ55_10940 CEJ55_10945 PF10689 CEJ55_10945 CEJ55_10950 PF07445 Primosomal replication protein priB and priC CEJ55_10955 PF04304 CEJ55_10955 CEJ55_10965 PF00156 Phosphoribosyl transferase domain CEJ55_10970 PF12168 CEJ55_10970 CEJ55_10970 PF12169 DNA polymerase III subunits gamma and tau domain III CEJ55_10970 PF12170 DNA polymerase III tau subunit V interacting with alpha CEJ55_10970 PF13177 DNA polymerase III, delta subunit CEJ55_10975 PF02575 YbaB/EbfC DNA-binding family CEJ55_10980 PF02132 RecR protein CEJ55_10980 PF13662 Toprim domain CEJ55_10985 PF00183 Hsp90 protein CEJ55_10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_10995 PF00406 Adenylate kinase CEJ55_10995 PF05191 Adenylate kinase, active site lid CEJ55_11000 PF00762 Ferrochelatase CEJ55_11005 PF07859 alpha/beta hydrolase fold CEJ55_11010 PF00294 pfkB family carbohydrate kinase CEJ55_11015 PF00999 Sodium/hydrogen exchanger family CEJ55_11015 PF02254 TrkA-N domain CEJ55_11020 PF07690 Major Facilitator Superfamily CEJ55_11030 PF00149 Calcineurin-like phosphoesterase CEJ55_11030 PF02872 5'-nucleotidase, C-terminal domain CEJ55_11035 PF04073 Aminoacyl-tRNA editing domain CEJ55_11045 PF01963 CEJ55_11045 CEJ55_11050 PF01381 Helix-turn-helix CEJ55_11055 PF00122 E1-E2 ATPase CEJ55_11055 PF00403 Heavy-metal-associated domain CEJ55_11055 PF00702 haloacid dehalogenase-like hydrolase CEJ55_11060 PF04960 Glutaminase CEJ55_11065 PF13520 Amino acid permease CEJ55_11075 PF13411 MerR HTH family regulatory protein CEJ55_11080 PF01957 NfeD-like C-terminal, partner-binding CEJ55_11085 PF01145 SPFH domain / Band 7 family CEJ55_11085 PF16200 CEJ55_11085 CEJ55_11090 PF00005 ABC transporter CEJ55_11095 PF03649 CEJ55_11095 CEJ55_11100 PF00085 Thioredoxin CEJ55_11100 PF14559 Tetratricopeptide repeat CEJ55_11100 PF14561 Tetratricopeptide repeat CEJ55_11105 PF00106 short chain dehydrogenase CEJ55_11110 PF13472 GDSL-like Lipase/Acylhydrolase family CEJ55_11115 PF00005 ABC transporter CEJ55_11125 PF03527 CEJ55_11125 CEJ55_11125 PF05593 CEJ55_11125 CEJ55_11125 PF14220 CEJ55_11125 CEJ55_11130 PF15631 CEJ55_11130 CEJ55_11135 PF03527 CEJ55_11135 CEJ55_11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_11155 PF03466 LysR substrate binding domain CEJ55_11160 PF04115 Ureidoglycolate hydrolase CEJ55_11165 PF01614 Bacterial transcriptional regulator CEJ55_11165 PF09339 IclR helix-turn-helix domain CEJ55_11170 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ55_11170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_11170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ55_11175 PF01261 Xylose isomerase-like TIM barrel CEJ55_11180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEJ55_11180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEJ55_11185 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CEJ55_11190 PF01979 Amidohydrolase family CEJ55_11195 PF00860 Permease family CEJ55_11200 PF02595 Glycerate kinase family CEJ55_11205 PF05899 Protein of unknown function (DUF861) CEJ55_11205 PF07883 Cupin domain CEJ55_11210 PF01546 Peptidase family M20/M25/M40 CEJ55_11215 PF02615 Malate/L-lactate dehydrogenase CEJ55_11220 PF00549 CoA-ligase CEJ55_11220 PF02629 CoA binding domain CEJ55_11225 PF06545 Protein of unknown function (DUF1116) CEJ55_11230 PF11392 CEJ55_11230 CEJ55_11235 PF00696 Amino acid kinase family CEJ55_11240 PF02222 ATP-grasp domain CEJ55_11245 PF00731 AIR carboxylase CEJ55_11255 PF12850 Calcineurin-like phosphoesterase superfamily domain CEJ55_11260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEJ55_11265 PF01406 tRNA synthetases class I (C) catalytic domain CEJ55_11265 PF09190 DALR domain CEJ55_11270 PF04307 CEJ55_11270 CEJ55_11275 PF13275 S4 domain CEJ55_11280 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEJ55_11280 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEJ55_11290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_11290 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_11295 PF00577 Outer membrane usher protein CEJ55_11295 PF13953 PapC C-terminal domain CEJ55_11295 PF13954 PapC N-terminal domain CEJ55_11305 PF00419 Fimbrial protein CEJ55_11310 PF00072 Response regulator receiver domain CEJ55_11310 PF00196 Bacterial regulatory proteins, luxR family CEJ55_11325 PF12833 Helix-turn-helix domain CEJ55_11335 PF14488 Domain of unknown function (DUF4434) CEJ55_11340 PF13283 CEJ55_11340 CEJ55_11340 PF13429 Tetratricopeptide repeat CEJ55_11345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEJ55_11345 PF13632 Glycosyl transferase family group 2 CEJ55_11350 PF01609 Transposase DDE domain CEJ55_11350 PF13808 CEJ55_11350 CEJ55_11375 PF05488 PAAR motif CEJ55_11375 PF05593 CEJ55_11375 CEJ55_11375 PF15640 CEJ55_11375 CEJ55_11380 PF08786 Domain of unknown function (DUF1795) CEJ55_11385 PF05954 Phage late control gene D protein (GPD) CEJ55_11395 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_11395 PF00672 HAMP domain CEJ55_11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_11400 PF00072 Response regulator receiver domain CEJ55_11400 PF00486 Transcriptional regulatory protein, C terminal CEJ55_11410 PF02321 Outer membrane efflux protein CEJ55_11415 PF11604 Copper binding periplasmic protein CusF CEJ55_11420 PF00529 HlyD family secretion protein CEJ55_11420 PF16576 CEJ55_11420 CEJ55_11425 PF00873 AcrB/AcrD/AcrF family CEJ55_11430 PF00324 Amino acid permease CEJ55_11435 PF00924 Mechanosensitive ion channel CEJ55_11440 PF00881 Nitroreductase family CEJ55_11445 PF04237 YjbR CEJ55_11450 PF06643 CEJ55_11450 CEJ55_11455 PF04107 Glutamate-cysteine ligase family 2(GCS2) CEJ55_11470 PF01848 CEJ55_11470 CEJ55_11475 PF01848 CEJ55_11475 CEJ55_11480 PF01648 4'-phosphopantetheinyl transferase superfamily CEJ55_11485 PF00593 TonB dependent receptor CEJ55_11485 PF07715 TonB-dependent Receptor Plug Domain CEJ55_11495 PF00756 Putative esterase CEJ55_11495 PF11806 Domain of unknown function (DUF3327) CEJ55_11500 PF03621 MbtH-like protein CEJ55_11505 PF00501 AMP-binding enzyme CEJ55_11505 PF00550 Phosphopantetheine attachment site CEJ55_11505 PF00668 Condensation domain CEJ55_11505 PF00975 Thioesterase domain CEJ55_11510 PF02706 Chain length determinant protein CEJ55_11515 PF00005 ABC transporter CEJ55_11520 PF01032 FecCD transport family CEJ55_11525 PF01032 FecCD transport family CEJ55_11530 PF05977 Transmembrane secretion effector CEJ55_11535 PF01497 Periplasmic binding protein CEJ55_11540 PF00425 chorismate binding enzyme CEJ55_11545 PF00501 AMP-binding enzyme CEJ55_11545 PF13193 AMP-binding enzyme C-terminal domain CEJ55_11550 PF00550 Phosphopantetheine attachment site CEJ55_11550 PF00857 Isochorismatase family CEJ55_11555 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_11560 PF03061 Thioesterase superfamily CEJ55_11565 PF02554 CEJ55_11565 CEJ55_11565 PF13722 CEJ55_11565 CEJ55_11570 PF04328 CEJ55_11570 CEJ55_11575 PF00465 Iron-containing alcohol dehydrogenase CEJ55_11580 PF00155 Aminotransferase class I and II CEJ55_11585 PF02195 ParB-like nuclease domain CEJ55_11590 PF01507 Phosphoadenosine phosphosulfate reductase family CEJ55_11590 PF11922 CEJ55_11590 CEJ55_11595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_11595 PF03466 LysR substrate binding domain CEJ55_11600 PF13098 Thioredoxin-like domain CEJ55_11605 PF00578 AhpC/TSA family CEJ55_11605 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEJ55_11610 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_11610 PF13192 Thioredoxin domain CEJ55_11615 PF00582 Universal stress protein family CEJ55_11620 PF00107 Zinc-binding dehydrogenase CEJ55_11620 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_11620 PF13823 Alcohol dehydrogenase GroES-associated CEJ55_11630 PF01272 Transcription elongation factor, GreA/GreB, C-term CEJ55_11630 PF14760 Rnk N-terminus CEJ55_11640 PF00445 Ribonuclease T2 family CEJ55_11645 PF00939 Sodium:sulfate symporter transmembrane region CEJ55_11650 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CEJ55_11655 PF03802 CEJ55_11655 CEJ55_11660 PF04223 Citrate lyase, alpha subunit (CitF) CEJ55_11665 PF03328 HpcH/HpaI aldolase/citrate lyase family CEJ55_11670 PF06857 CEJ55_11670 CEJ55_11675 PF08218 Citrate lyase ligase C-terminal domain CEJ55_11680 PF00989 PAS fold CEJ55_11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_11680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CEJ55_11680 PF17203 CEJ55_11680 CEJ55_11685 PF00072 Response regulator receiver domain CEJ55_11685 PF12431 CEJ55_11685 CEJ55_11690 PF03606 CEJ55_11690 CEJ55_11700 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CEJ55_11705 PF00313 'Cold-shock' DNA-binding domain CEJ55_11710 PF02537 CEJ55_11710 CEJ55_11715 PF00795 Carbon-nitrogen hydrolase CEJ55_11720 PF02416 mttA/Hcf106 family CEJ55_11725 PF04055 Radical SAM superfamily CEJ55_11725 PF16881 CEJ55_11725 CEJ55_11735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_11735 PF03466 LysR substrate binding domain CEJ55_11745 PF03099 Biotin/lipoate A/B protein ligase family CEJ55_11750 PF04359 Protein of unknown function (DUF493) CEJ55_11755 PF00768 D-alanyl-D-alanine carboxypeptidase CEJ55_11755 PF07943 Penicillin-binding protein 5, C-terminal domain CEJ55_11760 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CEJ55_11760 PF05036 Sporulation related domain CEJ55_11765 PF01098 CEJ55_11765 CEJ55_11770 PF00905 Penicillin binding protein transpeptidase domain CEJ55_11770 PF03717 Penicillin-binding Protein dimerisation domain CEJ55_11775 PF02590 Predicted SPOUT methyltransferase CEJ55_11780 PF02410 Oligomerisation domain CEJ55_11785 PF00300 Histidine phosphatase superfamily (branch 1) CEJ55_11790 PF01467 Cytidylyltransferase CEJ55_11795 PF06144 DNA polymerase III, delta subunit CEJ55_11795 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CEJ55_11800 PF04390 Lipopolysaccharide-assembly CEJ55_11805 PF00133 tRNA synthetases class I (I, L, M and V) CEJ55_11805 PF08264 Anticodon-binding domain of tRNA CEJ55_11805 PF13603 Leucyl-tRNA synthetase, Domain 2 CEJ55_11810 PF07295 CEJ55_11810 CEJ55_11815 PF08238 Sel1 repeat CEJ55_11820 PF06889 CEJ55_11820 CEJ55_11830 PF08238 Sel1 repeat CEJ55_11835 PF06889 CEJ55_11835 CEJ55_11845 PF00012 Hsp70 protein CEJ55_11850 PF01156 Inosine-uridine preferring nucleoside hydrolase CEJ55_11855 PF00005 ABC transporter CEJ55_11860 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_11865 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_11870 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_11875 PF01694 Rhomboid family CEJ55_11875 PF10282 Lactonase, 7-bladed beta-propeller CEJ55_11885 PF00795 Carbon-nitrogen hydrolase CEJ55_11890 PF00571 CBS domain CEJ55_11890 PF03471 Transporter associated domain CEJ55_11895 PF02130 Uncharacterized protein family UPF0054 CEJ55_11900 PF02562 PhoH-like protein CEJ55_11905 PF00919 Uncharacterized protein family UPF0004 CEJ55_11905 PF01938 TRAM domain CEJ55_11905 PF04055 Radical SAM superfamily CEJ55_11910 PF01494 FAD binding domain CEJ55_11955 PF00733 Asparagine synthase CEJ55_11955 PF13537 Glutamine amidotransferase domain CEJ55_11965 PF13242 HAD-hyrolase-like CEJ55_11965 PF13344 Haloacid dehalogenase-like hydrolase CEJ55_11970 PF00480 ROK family CEJ55_11970 PF01047 MarR family CEJ55_11975 PF01979 Amidohydrolase family CEJ55_11980 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEJ55_11985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEJ55_11985 PF00367 phosphotransferase system, EIIB CEJ55_11985 PF02378 Phosphotransferase system, EIIC CEJ55_11990 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEJ55_11990 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CEJ55_12000 PF03573 outer membrane porin, OprD family CEJ55_12005 PF13982 CEJ55_12005 CEJ55_12010 PF01475 Ferric uptake regulator family CEJ55_12020 PF00258 Flavodoxin CEJ55_12025 PF01402 Ribbon-helix-helix protein, copG family CEJ55_12030 PF12697 Alpha/beta hydrolase family CEJ55_12035 PF03925 SeqA protein CEJ55_12035 PF17206 CEJ55_12035 CEJ55_12040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEJ55_12040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEJ55_12040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEJ55_12040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEJ55_12045 PF13520 Amino acid permease CEJ55_12050 PF01276 Orn/Lys/Arg decarboxylase, major domain CEJ55_12050 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEJ55_12050 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEJ55_12060 PF00072 Response regulator receiver domain CEJ55_12060 PF00486 Transcriptional regulatory protein, C terminal CEJ55_12065 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_12065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_12065 PF02702 Osmosensitive K+ channel His kinase sensor domain CEJ55_12065 PF13492 GAF domain CEJ55_12065 PF13493 Domain of unknown function (DUF4118) CEJ55_12070 PF02669 CEJ55_12070 CEJ55_12075 PF00122 E1-E2 ATPase CEJ55_12075 PF00702 haloacid dehalogenase-like hydrolase CEJ55_12080 PF03814 CEJ55_12080 CEJ55_12085 PF09604 CEJ55_12085 CEJ55_12090 PF10725 CEJ55_12090 CEJ55_12095 PF03527 CEJ55_12095 CEJ55_12095 PF05593 CEJ55_12095 CEJ55_12125 PF08349 CEJ55_12125 CEJ55_12130 PF00875 DNA photolyase CEJ55_12130 PF03441 FAD binding domain of DNA photolyase CEJ55_12135 PF00854 POT family CEJ55_12140 PF01784 NIF3 (NGG1p interacting factor 3) CEJ55_12145 PF02682 Allophanate hydrolase subunit 1 CEJ55_12150 PF02626 Allophanate hydrolase subunit 2 CEJ55_12155 PF03746 LamB/YcsF family CEJ55_12160 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEJ55_12160 PF06827 Zinc finger found in FPG and IleRS CEJ55_12160 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEJ55_12165 PF05145 CEJ55_12165 CEJ55_12170 PF00419 Fimbrial protein CEJ55_12175 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_12175 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_12180 PF00577 Outer membrane usher protein CEJ55_12180 PF13953 PapC C-terminal domain CEJ55_12180 PF13954 PapC N-terminal domain CEJ55_12185 PF00419 Fimbrial protein CEJ55_12190 PF00285 Citrate synthase CEJ55_12205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEJ55_12210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEJ55_12215 PF00890 FAD binding domain CEJ55_12215 PF02910 Fumarate reductase flavoprotein C-term CEJ55_12220 PF13085 2Fe-2S iron-sulfur cluster binding domain CEJ55_12220 PF13534 4Fe-4S dicluster domain CEJ55_12225 PF00676 Dehydrogenase E1 component CEJ55_12225 PF02779 Transketolase, pyrimidine binding domain CEJ55_12225 PF16078 CEJ55_12225 CEJ55_12225 PF16870 CEJ55_12225 CEJ55_12230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEJ55_12230 PF00364 Biotin-requiring enzyme CEJ55_12230 PF02817 e3 binding domain CEJ55_12235 PF00549 CoA-ligase CEJ55_12235 PF08442 ATP-grasp domain CEJ55_12240 PF00549 CoA-ligase CEJ55_12240 PF02629 CoA binding domain CEJ55_12245 PF00392 Bacterial regulatory proteins, gntR family CEJ55_12245 PF07702 UTRA domain CEJ55_12250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_12250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_12250 PF02378 Phosphotransferase system, EIIC CEJ55_12255 PF01074 Glycosyl hydrolases family 38 N-terminal domain CEJ55_12255 PF07748 Glycosyl hydrolases family 38 C-terminal domain CEJ55_12255 PF09261 Alpha mannosidase, middle domain CEJ55_12265 PF01654 CEJ55_12265 CEJ55_12270 PF02322 CEJ55_12270 CEJ55_12275 PF08173 CEJ55_12275 CEJ55_12280 PF09600 CEJ55_12280 CEJ55_12285 PF03061 Thioesterase superfamily CEJ55_12290 PF01618 CEJ55_12290 CEJ55_12295 PF02472 Biopolymer transport protein ExbD/TolR CEJ55_12300 PF06519 TolA C-terminal CEJ55_12305 PF04052 TolB amino-terminal domain CEJ55_12305 PF07676 WD40-like Beta Propeller Repeat CEJ55_12310 PF00691 OmpA family CEJ55_12315 PF13174 Tetratricopeptide repeat CEJ55_12315 PF13432 Tetratricopeptide repeat CEJ55_12315 PF16331 CEJ55_12315 CEJ55_12360 PF02445 Quinolinate synthetase A protein CEJ55_12365 PF04973 CEJ55_12365 CEJ55_12370 PF01545 Cation efflux family CEJ55_12375 PF13985 CEJ55_12375 CEJ55_12385 PF00793 DAHP synthetase I family CEJ55_12390 PF00300 Histidine phosphatase superfamily (branch 1) CEJ55_12395 PF01263 Aldose 1-epimerase CEJ55_12400 PF00288 GHMP kinases N terminal domain CEJ55_12400 PF08544 GHMP kinases C terminal CEJ55_12400 PF10509 Galactokinase galactose-binding signature CEJ55_12405 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CEJ55_12405 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CEJ55_12410 PF16363 CEJ55_12410 CEJ55_12415 PF00005 ABC transporter CEJ55_12420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_12420 PF03459 TOBE domain CEJ55_12425 PF10766 Protein of unknown function (DUF2592) CEJ55_12435 PF13531 Bacterial extracellular solute-binding protein CEJ55_12440 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12445 PF00005 ABC transporter CEJ55_12445 PF03459 TOBE domain CEJ55_12450 PF08282 haloacid dehalogenase-like hydrolase CEJ55_12455 PF10282 Lactonase, 7-bladed beta-propeller CEJ55_12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_12460 PF03466 LysR substrate binding domain CEJ55_12465 PF04303 PrpF protein CEJ55_12470 PF00939 Sodium:sulfate symporter transmembrane region CEJ55_12475 PF00330 Aconitase family (aconitate hydratase) CEJ55_12475 PF00694 Aconitase C-terminal domain CEJ55_12480 PF01095 Pectinesterase CEJ55_12490 PF01161 Phosphatidylethanolamine-binding protein CEJ55_12495 PF00202 Aminotransferase class-III CEJ55_12500 PF04055 Radical SAM superfamily CEJ55_12500 PF06968 Biotin and Thiamin Synthesis associated domain CEJ55_12505 PF00155 Aminotransferase class I and II CEJ55_12510 PF08241 Methyltransferase domain CEJ55_12515 PF13500 AAA domain CEJ55_12520 PF00271 Helicase conserved C-terminal domain CEJ55_12520 PF02151 UvrB/uvrC motif CEJ55_12520 PF04851 Type III restriction enzyme, res subunit CEJ55_12520 PF12344 Ultra-violet resistance protein B CEJ55_12525 PF01933 Uncharacterised protein family UPF0052 CEJ55_12530 PF04055 Radical SAM superfamily CEJ55_12530 PF06463 Molybdenum Cofactor Synthesis C CEJ55_12530 PF13353 4Fe-4S single cluster domain CEJ55_12535 PF00994 Probable molybdopterin binding domain CEJ55_12540 PF01967 MoaC family CEJ55_12545 PF02597 ThiS family CEJ55_12550 PF02391 MoaE protein CEJ55_12555 PF01027 Inhibitor of apoptosis-promoting Bax1 CEJ55_12560 PF01027 Inhibitor of apoptosis-promoting Bax1 CEJ55_12565 PF01027 Inhibitor of apoptosis-promoting Bax1 CEJ55_12570 PF03706 CEJ55_12570 CEJ55_12575 PF13091 PLD-like domain CEJ55_12580 PF03372 Endonuclease/Exonuclease/phosphatase family CEJ55_12585 PF11076 CEJ55_12585 CEJ55_12590 PF12698 ABC-2 family transporter protein CEJ55_12595 PF12698 ABC-2 family transporter protein CEJ55_12600 PF00005 ABC transporter CEJ55_12605 PF16576 CEJ55_12605 CEJ55_12610 PF00440 Bacterial regulatory proteins, tetR family CEJ55_12610 PF09209 Domain of unknown function (DUF1956) CEJ55_12615 PF00270 DEAD/DEAH box helicase CEJ55_12615 PF00271 Helicase conserved C-terminal domain CEJ55_12625 PF01548 CEJ55_12625 CEJ55_12625 PF02371 CEJ55_12625 CEJ55_12630 PF08719 Domain of unknown function (DUF1768) CEJ55_12640 PF00270 DEAD/DEAH box helicase CEJ55_12640 PF06733 DEAD_2 CEJ55_12640 PF13307 Helicase C-terminal domain CEJ55_12645 PF02885 Glycosyl transferase family, helical bundle domain CEJ55_12650 PF02615 Malate/L-lactate dehydrogenase CEJ55_12655 PF07338 Protein of unknown function (DUF1471) CEJ55_12660 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEJ55_12665 PF13640 2OG-Fe(II) oxygenase superfamily CEJ55_12670 PF00593 TonB dependent receptor CEJ55_12670 PF07715 TonB-dependent Receptor Plug Domain CEJ55_12675 PF07338 Protein of unknown function (DUF1471) CEJ55_12680 PF05971 Protein of unknown function (DUF890) CEJ55_12685 PF00924 Mechanosensitive ion channel CEJ55_12690 PF00005 ABC transporter CEJ55_12695 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12700 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_12715 PF00210 Ferritin-like domain CEJ55_12725 PF00892 EamA-like transporter family CEJ55_12730 PF13505 Outer membrane protein beta-barrel domain CEJ55_12735 PF00884 Sulfatase CEJ55_12745 PF01325 Iron dependent repressor, N-terminal DNA binding domain CEJ55_12745 PF02742 Iron dependent repressor, metal binding and dimerisation domain CEJ55_12750 PF03600 Citrate transporter CEJ55_12755 PF03734 L,D-transpeptidase catalytic domain CEJ55_12760 PF00005 ABC transporter CEJ55_12760 PF12848 ABC transporter CEJ55_12770 PF01548 CEJ55_12770 CEJ55_12770 PF02371 CEJ55_12770 CEJ55_12775 PF07350 Protein of unknown function (DUF1479) CEJ55_12780 PF08282 haloacid dehalogenase-like hydrolase CEJ55_12785 PF01228 Glycine radical CEJ55_12785 PF02901 Pyruvate formate lyase CEJ55_12795 PF00923 Transaldolase CEJ55_12800 PF00899 ThiF family CEJ55_12805 PF00994 Probable molybdopterin binding domain CEJ55_12805 PF03453 MoeA N-terminal region (domain I and II) CEJ55_12805 PF03454 MoeA C-terminal region (domain IV) CEJ55_12810 PF01112 Asparaginase CEJ55_12815 PF00005 ABC transporter CEJ55_12815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_12820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_12825 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12830 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12830 PF12911 CEJ55_12830 CEJ55_12835 PF00563 EAL domain CEJ55_12835 PF17153 CEJ55_12835 CEJ55_12840 PF00990 GGDEF domain CEJ55_12840 PF17156 CEJ55_12840 CEJ55_12845 PF00919 Uncharacterized protein family UPF0004 CEJ55_12845 PF04055 Radical SAM superfamily CEJ55_12850 PF10799 CEJ55_12850 CEJ55_12855 PF07995 Glucose / Sorbosone dehydrogenase CEJ55_12860 PF00043 Glutathione S-transferase, C-terminal domain CEJ55_12860 PF02798 Glutathione S-transferase, N-terminal domain CEJ55_12865 PF00768 D-alanyl-D-alanine carboxypeptidase CEJ55_12865 PF07943 Penicillin-binding protein 5, C-terminal domain CEJ55_12870 PF00455 CEJ55_12870 CEJ55_12870 PF08220 DeoR-like helix-turn-helix domain CEJ55_12875 PF01569 PAP2 superfamily CEJ55_12880 PF07690 Major Facilitator Superfamily CEJ55_12890 PF08282 haloacid dehalogenase-like hydrolase CEJ55_12895 PF07690 Major Facilitator Superfamily CEJ55_12900 PF00440 Bacterial regulatory proteins, tetR family CEJ55_12905 PF02080 TrkA-C domain CEJ55_12905 PF06826 CEJ55_12905 CEJ55_12910 PF11045 CEJ55_12910 CEJ55_12915 PF00462 Glutaredoxin CEJ55_12920 PF07214 CEJ55_12920 CEJ55_12925 PF00881 Nitroreductase family CEJ55_12930 PF08443 RimK-like ATP-grasp domain CEJ55_12935 PF10722 Putative bacterial sensory transduction regulator CEJ55_12945 PF13416 Bacterial extracellular solute-binding protein CEJ55_12950 PF00005 ABC transporter CEJ55_12950 PF08402 TOBE domain CEJ55_12955 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12960 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12965 PF10767 CEJ55_12965 CEJ55_12970 PF05958 tRNA (Uracil-5-)-methyltransferase CEJ55_12975 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_12980 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12985 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_12990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_12995 PF00005 ABC transporter CEJ55_13000 PF12883 Protein of unknown function (DUF3828) CEJ55_13005 PF01906 Putative heavy-metal-binding CEJ55_13010 PF01510 N-acetylmuramoyl-L-alanine amidase CEJ55_13015 PF01370 NAD dependent epimerase/dehydratase family CEJ55_13020 PF11066 CEJ55_13020 CEJ55_13020 PF13460 NADH(P)-binding CEJ55_13025 PF01212 Beta-eliminating lyase CEJ55_13030 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ55_13030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_13030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ55_13035 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_13035 PF00175 Oxidoreductase NAD-binding domain CEJ55_13035 PF00970 Oxidoreductase FAD-binding domain CEJ55_13040 PF03063 Prismane/CO dehydrogenase family CEJ55_13045 PF03956 CEJ55_13045 CEJ55_13055 PF00230 Major intrinsic protein CEJ55_13060 PF11398 Protein of unknown function (DUF2813) CEJ55_13065 PF04393 CEJ55_13065 CEJ55_13070 PF16576 CEJ55_13070 CEJ55_13075 PF00005 ABC transporter CEJ55_13075 PF02687 CEJ55_13075 CEJ55_13075 PF12704 MacB-like periplasmic core domain CEJ55_13080 PF00313 'Cold-shock' DNA-binding domain CEJ55_13085 PF02617 ATP-dependent Clp protease adaptor protein ClpS CEJ55_13090 PF00004 ATPase family associated with various cellular activities (AAA) CEJ55_13090 PF02861 Clp amino terminal domain CEJ55_13090 PF07724 AAA domain (Cdc48 subfamily) CEJ55_13090 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ55_13100 PF01176 Translation initiation factor 1A / IF-1 CEJ55_13110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CEJ55_13115 PF00005 ABC transporter CEJ55_13115 PF00664 ABC transporter transmembrane region CEJ55_13120 PF00005 ABC transporter CEJ55_13120 PF00664 ABC transporter transmembrane region CEJ55_13125 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_13135 PF01037 AsnC family CEJ55_13135 PF13412 Winged helix-turn-helix DNA-binding CEJ55_13140 PF01580 FtsK/SpoIIIE family CEJ55_13140 PF09397 Ftsk gamma domain CEJ55_13140 PF13491 CEJ55_13140 CEJ55_13145 PF03548 Outer membrane lipoprotein carrier protein LolA CEJ55_13150 PF00004 ATPase family associated with various cellular activities (AAA) CEJ55_13150 PF12002 MgsA AAA+ ATPase C terminal CEJ55_13150 PF16193 CEJ55_13150 CEJ55_13155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEJ55_13155 PF02403 Seryl-tRNA synthetase N-terminal domain CEJ55_13160 PF00384 Molybdopterin oxidoreductase CEJ55_13160 PF01568 Molydopterin dinucleotide binding domain CEJ55_13160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ55_13165 PF12800 4Fe-4S binding domain CEJ55_13165 PF13247 4Fe-4S dicluster domain CEJ55_13170 PF04976 CEJ55_13170 CEJ55_13175 PF00857 Isochorismatase family CEJ55_13180 PF07690 Major Facilitator Superfamily CEJ55_13185 PF13520 Amino acid permease CEJ55_13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_13190 PF03466 LysR substrate binding domain CEJ55_13195 PF02525 Flavodoxin-like fold CEJ55_13200 PF04055 Radical SAM superfamily CEJ55_13200 PF13353 4Fe-4S single cluster domain CEJ55_13205 PF01228 Glycine radical CEJ55_13205 PF02901 Pyruvate formate lyase CEJ55_13210 PF01226 Formate/nitrite transporter CEJ55_13215 PF02624 YcaO-like family CEJ55_13220 PF04239 Protein of unknown function (DUF421) CEJ55_13225 PF00266 Aminotransferase class-V CEJ55_13230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEJ55_13235 PF01435 Peptidase family M48 CEJ55_13240 PF02224 Cytidylate kinase CEJ55_13245 PF00575 S1 RNA binding domain CEJ55_13250 PF00216 Bacterial DNA-binding protein CEJ55_13255 PF00753 Metallo-beta-lactamase superfamily CEJ55_13255 PF03772 CEJ55_13255 CEJ55_13260 PF00005 ABC transporter CEJ55_13260 PF00664 ABC transporter transmembrane region CEJ55_13265 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CEJ55_13270 PF06224 CEJ55_13270 CEJ55_13275 PF03966 Trm112p-like protein CEJ55_13280 PF02348 Cytidylyltransferase CEJ55_13285 PF01636 Phosphotransferase enzyme family CEJ55_13290 PF02698 DUF218 domain CEJ55_13300 PF13847 Methyltransferase domain CEJ55_13305 PF03882 KicB killing factor CEJ55_13305 PF17192 CEJ55_13305 CEJ55_13305 PF17193 CEJ55_13305 CEJ55_13310 PF04288 MukE-like family CEJ55_13315 PF04310 MukB N-terminal CEJ55_13315 PF13558 Putative exonuclease SbcCD, C subunit CEJ55_13315 PF16330 CEJ55_13315 CEJ55_13320 PF01471 Putative peptidoglycan binding domain CEJ55_13320 PF03734 L,D-transpeptidase catalytic domain CEJ55_13330 PF05951 CEJ55_13330 CEJ55_13335 PF00753 Metallo-beta-lactamase superfamily CEJ55_13340 PF00155 Aminotransferase class I and II CEJ55_13345 PF00267 Gram-negative porin CEJ55_13350 PF00152 tRNA synthetases class II (D, K and N) CEJ55_13350 PF01336 OB-fold nucleic acid binding domain CEJ55_13355 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CEJ55_13360 PF01433 Peptidase family M1 CEJ55_13360 PF11940 Domain of unknown function (DUF3458) CEJ55_13360 PF17432 CEJ55_13360 CEJ55_13365 PF00005 ABC transporter CEJ55_13370 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_13375 PF00296 Luciferase-like monooxygenase CEJ55_13380 PF09084 NMT1/THI5 like CEJ55_13385 PF03358 NADPH-dependent FMN reductase CEJ55_13395 PF00419 Fimbrial protein CEJ55_13400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_13400 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_13405 PF00577 Outer membrane usher protein CEJ55_13405 PF13953 PapC C-terminal domain CEJ55_13405 PF13954 PapC N-terminal domain CEJ55_13410 PF00419 Fimbrial protein CEJ55_13415 PF00419 Fimbrial protein CEJ55_13420 PF00419 Fimbrial protein CEJ55_13425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_13425 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_13430 PF01180 Dihydroorotate dehydrogenase CEJ55_13435 PF07126 CEJ55_13435 CEJ55_13440 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_13440 PF03473 MOSC domain CEJ55_13440 PF03476 MOSC N-terminal beta barrel domain CEJ55_13445 PF01170 Putative RNA methylase family UPF0020 CEJ55_13445 PF02926 THUMP domain CEJ55_13445 PF10672 S-adenosylmethionine-dependent methyltransferase CEJ55_13450 PF00005 ABC transporter CEJ55_13450 PF12848 ABC transporter CEJ55_13450 PF16326 CEJ55_13450 CEJ55_13455 PF04403 CEJ55_13455 CEJ55_13460 PF02470 CEJ55_13460 CEJ55_13465 PF03886 Protein of unknown function (DUF330) CEJ55_13470 PF04957 Ribosome modulation factor CEJ55_13475 PF07977 FabA-like domain CEJ55_13480 PF05362 Lon protease (S16) C-terminal proteolytic domain CEJ55_13480 PF13654 AAA domain CEJ55_13485 PF06303 Organiser of macrodomain of Terminus of chromosome CEJ55_13485 PF17414 CEJ55_13485 CEJ55_13490 PF00691 OmpA family CEJ55_13490 PF01389 OmpA-like transmembrane domain CEJ55_13500 PF03846 Cell division inhibitor SulA CEJ55_13505 PF04993 TfoX N-terminal domain CEJ55_13505 PF04994 TfoX C-terminal domain CEJ55_13510 PF12805 CEJ55_13510 CEJ55_13510 PF13515 CEJ55_13510 CEJ55_13515 PF03733 CEJ55_13515 CEJ55_13520 PF00580 UvrD/REP helicase N-terminal domain CEJ55_13520 PF12462 CEJ55_13520 CEJ55_13520 PF13361 UvrD-like helicase C-terminal domain CEJ55_13525 PF02142 MGS-like domain CEJ55_13530 PF09829 CEJ55_13530 CEJ55_13535 PF13380 CoA binding domain CEJ55_13540 PF08755 Hemimethylated DNA-binding protein YccV like CEJ55_13545 PF10672 S-adenosylmethionine-dependent methyltransferase CEJ55_13550 PF00708 Acylphosphatase CEJ55_13555 PF04358 DsrC like protein CEJ55_13560 PF01027 Inhibitor of apoptosis-promoting Bax1 CEJ55_13570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEJ55_13570 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CEJ55_13575 PF00374 Nickel-dependent hydrogenase CEJ55_13580 PF01292 Prokaryotic cytochrome b561 CEJ55_13585 PF01750 Hydrogenase maturation protease CEJ55_13590 PF07449 Hydrogenase-1 expression protein HyaE CEJ55_13595 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CEJ55_13600 PF01654 CEJ55_13600 CEJ55_13605 PF02322 CEJ55_13605 CEJ55_13610 PF08173 CEJ55_13610 CEJ55_13615 PF00328 Histidine phosphatase superfamily (branch 2) CEJ55_13620 PF02706 Chain length determinant protein CEJ55_13620 PF13614 AAA domain CEJ55_13620 PF13807 CEJ55_13620 CEJ55_13625 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEJ55_13630 PF02563 Polysaccharide biosynthesis/export protein CEJ55_13630 PF10531 SLBB domain CEJ55_13635 PF06082 CEJ55_13635 CEJ55_13640 PF06251 Capsule biosynthesis GfcC CEJ55_13645 PF11102 Group 4 capsule polysaccharide formation lipoprotein gfcB CEJ55_13655 PF00313 'Cold-shock' DNA-binding domain CEJ55_13660 PF00313 'Cold-shock' DNA-binding domain CEJ55_13670 PF15939 CEJ55_13670 CEJ55_13675 PF08178 CEJ55_13675 CEJ55_13680 PF12801 CEJ55_13680 CEJ55_13685 PF00072 Response regulator receiver domain CEJ55_13685 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_13685 PF01627 Hpt domain CEJ55_13685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_13690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ55_13695 PF00072 Response regulator receiver domain CEJ55_13695 PF00486 Transcriptional regulatory protein, C terminal CEJ55_13700 PF03264 NapC/NirT cytochrome c family, N-terminal region CEJ55_13710 PF02613 Nitrate reductase delta subunit CEJ55_13715 PF13591 MerR HTH family regulatory protein CEJ55_13720 PF00226 DnaJ domain CEJ55_13720 PF01556 DnaJ C terminal domain CEJ55_13730 PF00328 Histidine phosphatase superfamily (branch 2) CEJ55_13735 PF13993 CEJ55_13735 CEJ55_13740 PF03358 NADPH-dependent FMN reductase CEJ55_13750 PF10685 CEJ55_13750 CEJ55_13755 PF00860 Permease family CEJ55_13760 PF01613 Flavin reductase like domain CEJ55_13765 PF00881 Nitroreductase family CEJ55_13770 PF00561 alpha/beta hydrolase fold CEJ55_13775 PF01042 Endoribonuclease L-PSP CEJ55_13780 PF00857 Isochorismatase family CEJ55_13785 PF00296 Luciferase-like monooxygenase CEJ55_13790 PF00440 Bacterial regulatory proteins, tetR family CEJ55_13790 PF08362 YcdC-like protein, C-terminal region CEJ55_13795 PF00171 Aldehyde dehydrogenase family CEJ55_13795 PF01619 Proline dehydrogenase CEJ55_13795 PF14850 DNA-binding domain of Proline dehydrogenase CEJ55_13810 PF00474 Sodium:solute symporter family CEJ55_13825 PF03239 CEJ55_13825 CEJ55_13830 PF09375 Imelysin CEJ55_13830 PF13473 Cupredoxin-like domain CEJ55_13835 PF04261 Dyp-type peroxidase family CEJ55_13845 PF02562 PhoH-like protein CEJ55_13850 PF13994 CEJ55_13850 CEJ55_13855 PF00535 Glycosyl transferase family 2 CEJ55_13860 PF01522 Polysaccharide deacetylase CEJ55_13860 PF14883 Hypothetical glycosyl hydrolase family 13 CEJ55_13870 PF00990 GGDEF domain CEJ55_13870 PF17158 CEJ55_13870 CEJ55_13895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ55_13900 PF02811 PHP domain CEJ55_13905 PF02613 Nitrate reductase delta subunit CEJ55_13910 PF06496 CEJ55_13910 CEJ55_13915 PF03783 Curli production assembly/transport component CsgG CEJ55_13920 PF10614 CEJ55_13920 CEJ55_13925 PF10627 CEJ55_13925 CEJ55_13930 PF00196 Bacterial regulatory proteins, luxR family CEJ55_13945 PF07012 CEJ55_13945 CEJ55_13950 PF07012 CEJ55_13950 CEJ55_13955 PF10610 Thin aggregative fimbriae synthesis protein CEJ55_13965 PF01661 Macro domain CEJ55_13970 PF13091 PLD-like domain CEJ55_13975 PF01757 CEJ55_13975 CEJ55_13990 PF04349 Periplasmic glucan biosynthesis protein, MdoG CEJ55_13995 PF00535 Glycosyl transferase family 2 CEJ55_14000 PF07119 CEJ55_14000 CEJ55_14005 PF13984 CEJ55_14005 CEJ55_14010 PF07690 Major Facilitator Superfamily CEJ55_14015 PF03279 CEJ55_14015 CEJ55_14020 PF00581 Rhodanese-like domain CEJ55_14020 PF12368 CEJ55_14020 CEJ55_14025 PF04264 YceI-like domain CEJ55_14030 PF01292 Prokaryotic cytochrome b561 CEJ55_14035 PF10968 CEJ55_14035 CEJ55_14040 PF01266 FAD dependent oxidoreductase CEJ55_14045 PF13991 CEJ55_14045 CEJ55_14050 PF06183 DinI-like family CEJ55_14055 PF01979 Amidohydrolase family CEJ55_14060 PF07273 Protein of unknown function (DUF1439) CEJ55_14065 PF04399 Glutaredoxin 2, C terminal domain CEJ55_14065 PF13417 Glutathione S-transferase, N-terminal domain CEJ55_14070 PF07690 Major Facilitator Superfamily CEJ55_14075 PF13302 Acetyltransferase (GNAT) domain CEJ55_14080 PF04337 Protein of unknown function, DUF480 CEJ55_14085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEJ55_14090 PF03023 CEJ55_14090 CEJ55_14095 PF05130 FlgN protein CEJ55_14100 PF04316 Anti-sigma-28 factor, FlgM CEJ55_14105 PF13144 SAF-like CEJ55_14110 PF00460 Flagella basal body rod protein CEJ55_14115 PF00460 Flagella basal body rod protein CEJ55_14115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_14120 PF03963 CEJ55_14120 CEJ55_14120 PF13860 FlgD Ig-like domain CEJ55_14120 PF13861 FlgD Tudor-like domain CEJ55_14125 PF00460 Flagella basal body rod protein CEJ55_14125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_14125 PF07559 Flagellar basal body protein FlaE CEJ55_14130 PF00460 Flagella basal body rod protein CEJ55_14130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_14135 PF00460 Flagella basal body rod protein CEJ55_14135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_14140 PF02107 CEJ55_14140 CEJ55_14145 PF02119 CEJ55_14145 CEJ55_14150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CEJ55_14150 PF10135 CEJ55_14150 CEJ55_14155 PF00460 Flagella basal body rod protein CEJ55_14155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ55_14160 PF00669 Bacterial flagellin N-terminal helical region CEJ55_14165 PF00575 S1 RNA binding domain CEJ55_14165 PF10150 Ribonuclease E/G family CEJ55_14165 PF12111 Polyribonucleotide phosphorylase C terminal CEJ55_14170 PF10848 CEJ55_14170 CEJ55_14175 PF00849 RNA pseudouridylate synthase CEJ55_14175 PF01479 S4 domain CEJ55_14180 PF02545 Maf-like protein CEJ55_14185 PF02620 CEJ55_14185 CEJ55_14190 PF01783 Ribosomal L32p protein family CEJ55_14195 PF02504 Fatty acid synthesis protein CEJ55_14200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEJ55_14200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEJ55_14205 PF00698 Acyl transferase domain CEJ55_14210 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_14215 PF00550 Phosphopantetheine attachment site CEJ55_14220 PF00109 Beta-ketoacyl synthase, N-terminal domain CEJ55_14220 PF02801 Beta-ketoacyl synthase, C-terminal domain CEJ55_14225 PF01063 Aminotransferase class IV CEJ55_14230 PF02618 YceG-like family CEJ55_14235 PF02223 Thymidylate kinase CEJ55_14240 PF09115 DNA polymerase III, delta subunit, C terminal CEJ55_14240 PF13177 DNA polymerase III, delta subunit CEJ55_14245 PF01026 TatD related DNase CEJ55_14250 PF00367 phosphotransferase system, EIIB CEJ55_14250 PF02378 Phosphotransferase system, EIIC CEJ55_14255 PF00593 TonB dependent receptor CEJ55_14255 PF07715 TonB-dependent Receptor Plug Domain CEJ55_14260 PF01230 HIT domain CEJ55_14265 PF07233 Protein of unknown function (DUF1425) CEJ55_14270 PF13036 Protein of unknown function (DUF3897) CEJ55_14275 PF01636 Phosphotransferase enzyme family CEJ55_14280 PF00933 Glycosyl hydrolase family 3 N terminal domain CEJ55_14285 PF05728 Uncharacterised protein family (UPF0227) CEJ55_14290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_14300 PF05433 CEJ55_14300 CEJ55_14305 PF00440 Bacterial regulatory proteins, tetR family CEJ55_14310 PF07338 Protein of unknown function (DUF1471) CEJ55_14315 PF01476 LysM domain CEJ55_14315 PF03734 L,D-transpeptidase catalytic domain CEJ55_14320 PF00270 DEAD/DEAH box helicase CEJ55_14320 PF00271 Helicase conserved C-terminal domain CEJ55_14320 PF02559 CarD-like/TRCF domain CEJ55_14320 PF03461 TRCF domain CEJ55_14325 PF01757 CEJ55_14325 CEJ55_14330 PF02687 CEJ55_14330 CEJ55_14330 PF12704 MacB-like periplasmic core domain CEJ55_14335 PF00005 ABC transporter CEJ55_14340 PF02687 CEJ55_14340 CEJ55_14340 PF12704 MacB-like periplasmic core domain CEJ55_14345 PF00480 ROK family CEJ55_14350 PF02146 Sir2 family CEJ55_14355 PF04536 TLP18 CEJ55_14360 PF12158 CEJ55_14360 CEJ55_14365 PF13416 Bacterial extracellular solute-binding protein CEJ55_14370 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_14375 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_14380 PF00005 ABC transporter CEJ55_14380 PF08402 TOBE domain CEJ55_14390 PF01546 Peptidase family M20/M25/M40 CEJ55_14390 PF07687 Peptidase dimerisation domain CEJ55_14395 PF08007 Cupin superfamily protein CEJ55_14400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_14400 PF08918 PhoQ Sensor CEJ55_14405 PF00072 Response regulator receiver domain CEJ55_14405 PF00486 Transcriptional regulatory protein, C terminal CEJ55_14410 PF00206 Lyase CEJ55_14410 PF08328 Adenylosuccinate lyase C-terminal CEJ55_14415 PF04356 Protein of unknown function (DUF489) CEJ55_14420 PF03054 tRNA methyl transferase CEJ55_14425 PF00293 NUDIX domain CEJ55_14430 PF00849 RNA pseudouridylate synthase CEJ55_14435 PF00180 Isocitrate/isopropylmalate dehydrogenase CEJ55_14445 PF07166 Protein of unknown function (DUF1398) CEJ55_14450 PF13411 MerR HTH family regulatory protein CEJ55_14455 PF00563 EAL domain CEJ55_14455 PF04940 Sensors of blue-light using FAD CEJ55_14460 PF10798 Biofilm development protein YmgB/AriR CEJ55_14470 PF10798 Biofilm development protein YmgB/AriR CEJ55_14480 PF00563 EAL domain CEJ55_14480 PF12792 CEJ55_14480 CEJ55_14500 PF03212 Pertactin CEJ55_14500 PF03797 Autotransporter beta-domain CEJ55_14505 PF16456 CEJ55_14505 CEJ55_14510 PF13436 CEJ55_14510 CEJ55_14510 PF13488 CEJ55_14510 CEJ55_14525 PF03797 Autotransporter beta-domain CEJ55_14535 PF03776 Septum formation topological specificity factor MinE CEJ55_14540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEJ55_14545 PF03775 Septum formation inhibitor MinC, C-terminal domain CEJ55_14545 PF05209 Septum formation inhibitor MinC, N-terminal domain CEJ55_14555 PF05666 CEJ55_14555 CEJ55_14560 PF04151 Bacterial pre-peptidase C-terminal domain CEJ55_14570 PF05166 YcgL domain CEJ55_14575 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEJ55_14580 PF03692 CEJ55_14580 CEJ55_14590 PF00717 Peptidase S24-like CEJ55_14595 PF00817 impB/mucB/samB family CEJ55_14595 PF11798 IMS family HHH motif CEJ55_14595 PF11799 impB/mucB/samB family C-terminal domain CEJ55_14595 PF13438 CEJ55_14595 CEJ55_14600 PF02600 Disulfide bond formation protein DsbB CEJ55_14605 PF06450 CEJ55_14605 CEJ55_14610 PF00392 Bacterial regulatory proteins, gntR family CEJ55_14610 PF07840 FadR C-terminal domain CEJ55_14615 PF04293 CEJ55_14615 CEJ55_14620 PF01266 FAD dependent oxidoreductase CEJ55_14625 PF00842 Alanine racemase, C-terminal domain CEJ55_14625 PF01168 Alanine racemase, N-terminal domain CEJ55_14630 PF00999 Sodium/hydrogen exchanger family CEJ55_14630 PF02080 TrkA-C domain CEJ55_14630 PF03471 Transporter associated domain CEJ55_14635 PF02016 LD-carboxypeptidase CEJ55_14645 PF01464 Transglycosylase SLT domain CEJ55_14650 PF07238 PilZ domain CEJ55_14650 PF07317 Flagellar regulator YcgR CEJ55_14655 PF04226 CEJ55_14655 CEJ55_14665 PF01204 Trehalase CEJ55_14675 PF00381 PTS HPr component phosphorylation site CEJ55_14675 PF00391 PEP-utilising enzyme, mobile domain CEJ55_14675 PF03610 PTS system fructose IIA component CEJ55_14675 PF05524 PEP-utilising enzyme, N-terminal CEJ55_14680 PF02734 DAK2 domain CEJ55_14685 PF02733 Dak1 domain CEJ55_14690 PF00158 Sigma-54 interaction domain CEJ55_14690 PF00989 PAS fold CEJ55_14690 PF02954 Bacterial regulatory protein, Fis family CEJ55_14695 PF03212 Pertactin CEJ55_14695 PF03797 Autotransporter beta-domain CEJ55_14710 PF01926 50S ribosome-binding GTPase CEJ55_14710 PF06071 Protein of unknown function (DUF933) CEJ55_14715 PF01195 Peptidyl-tRNA hydrolase CEJ55_14720 PF10762 CEJ55_14720 CEJ55_14725 PF00916 CEJ55_14725 CEJ55_14725 PF01740 STAS domain CEJ55_14730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEJ55_14730 PF14572 Phosphoribosyl synthetase-associated domain CEJ55_14735 PF00288 GHMP kinases N terminal domain CEJ55_14735 PF08544 GHMP kinases C terminal CEJ55_14740 PF03550 Outer membrane lipoprotein LolB CEJ55_14745 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CEJ55_14745 PF01488 Shikimate / quinate 5-dehydrogenase CEJ55_14745 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CEJ55_14750 PF00472 RF-1 domain CEJ55_14750 PF03462 PCRF domain CEJ55_14755 PF13847 Methyltransferase domain CEJ55_14760 PF04247 CEJ55_14760 CEJ55_14765 PF13369 CEJ55_14765 CEJ55_14765 PF13371 Tetratricopeptide repeat CEJ55_14770 PF00793 DAHP synthetase I family CEJ55_14775 PF13940 CEJ55_14775 CEJ55_14785 PF13940 CEJ55_14785 CEJ55_14790 PF13940 CEJ55_14790 CEJ55_14800 PF01699 Sodium/calcium exchanger protein CEJ55_14805 PF06150 ChaB CEJ55_14810 PF04752 CEJ55_14810 CEJ55_14815 PF02635 DsrE/DsrF-like family CEJ55_14820 PF11924 Protein of unknown function (DUF3442) CEJ55_14825 PF00072 Response regulator receiver domain CEJ55_14825 PF00196 Bacterial regulatory proteins, luxR family CEJ55_14830 PF00672 HAMP domain CEJ55_14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_14830 PF07730 Histidine kinase CEJ55_14830 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEJ55_14840 PF07690 Major Facilitator Superfamily CEJ55_14845 PF00384 Molybdopterin oxidoreductase CEJ55_14845 PF01568 Molydopterin dinucleotide binding domain CEJ55_14845 PF14710 Respiratory nitrate reductase alpha N-terminal CEJ55_14850 PF13247 4Fe-4S dicluster domain CEJ55_14850 PF14711 Respiratory nitrate reductase beta C-terminal CEJ55_14855 PF02613 Nitrate reductase delta subunit CEJ55_14860 PF02665 Nitrate reductase gamma subunit CEJ55_14880 PF00551 Formyl transferase CEJ55_14880 PF01842 ACT domain CEJ55_14885 PF02810 SEC-C motif CEJ55_14890 PF01734 Patatin-like phospholipase CEJ55_14895 PF00072 Response regulator receiver domain CEJ55_14900 PF00483 Nucleotidyl transferase CEJ55_14905 PF00816 H-NS histone family CEJ55_14910 PF00265 Thymidine kinase CEJ55_14915 PF00171 Aldehyde dehydrogenase family CEJ55_14915 PF00465 Iron-containing alcohol dehydrogenase CEJ55_14920 PF01914 CEJ55_14920 CEJ55_14930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_14935 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_14940 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_14940 PF12911 CEJ55_14940 CEJ55_14945 PF00005 ABC transporter CEJ55_14945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_14950 PF00005 ABC transporter CEJ55_14950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_14955 PF04269 Protein of unknown function, DUF440 CEJ55_14960 PF13091 PLD-like domain CEJ55_14960 PF13396 CEJ55_14960 CEJ55_14970 PF02254 TrkA-N domain CEJ55_14970 PF07885 Ion channel CEJ55_14975 PF03795 YCII-related domain CEJ55_14980 PF03544 Gram-negative bacterial TonB protein C-terminal CEJ55_14980 PF16031 CEJ55_14980 CEJ55_14985 PF03061 Thioesterase superfamily CEJ55_14990 PF04279 CEJ55_14990 CEJ55_14995 PF06790 CEJ55_14995 CEJ55_15010 PF05974 Domain of unknown function (DUF892) CEJ55_15015 PF05974 Domain of unknown function (DUF892) CEJ55_15020 PF10685 CEJ55_15020 CEJ55_15025 PF00290 Tryptophan synthase alpha chain CEJ55_15030 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_15035 PF00218 Indole-3-glycerol phosphate synthase CEJ55_15035 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CEJ55_15040 PF00117 Glutamine amidotransferase class-I CEJ55_15040 PF00591 Glycosyl transferase family, a/b domain CEJ55_15040 PF02885 Glycosyl transferase family, helical bundle domain CEJ55_15045 PF00425 chorismate binding enzyme CEJ55_15045 PF04715 Anthranilate synthase component I, N terminal region CEJ55_15050 PF08255 CEJ55_15050 CEJ55_15055 PF02811 PHP domain CEJ55_15060 PF01300 Telomere recombination CEJ55_15065 PF00849 RNA pseudouridylate synthase CEJ55_15065 PF01479 S4 domain CEJ55_15070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CEJ55_15070 PF12557 Cob(I)alamin adenosyltransferase N terminal CEJ55_15075 PF00106 short chain dehydrogenase CEJ55_15080 PF01343 Peptidase family S49 CEJ55_15080 PF08496 CEJ55_15080 CEJ55_15085 PF10692 Protein of unknown function (DUF2498) CEJ55_15095 PF01131 DNA topoisomerase CEJ55_15095 PF01396 CEJ55_15095 CEJ55_15095 PF01751 Toprim domain CEJ55_15095 PF08272 Topoisomerase I zinc-ribbon-like CEJ55_15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_15105 PF03466 LysR substrate binding domain CEJ55_15125 PF00330 Aconitase family (aconitate hydratase) CEJ55_15125 PF00694 Aconitase C-terminal domain CEJ55_15130 PF00925 GTP cyclohydrolase II CEJ55_15135 PF01569 PAP2 superfamily CEJ55_15140 PF06305 CEJ55_15140 CEJ55_15145 PF14559 Tetratricopeptide repeat CEJ55_15150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEJ55_15155 PF01253 Translation initiation factor SUI1 CEJ55_15160 PF05433 CEJ55_15160 CEJ55_15165 PF00455 CEJ55_15165 CEJ55_15165 PF08220 DeoR-like helix-turn-helix domain CEJ55_15175 PF00563 EAL domain CEJ55_15175 PF00990 GGDEF domain CEJ55_15175 PF13426 PAS domain CEJ55_15185 PF00575 S1 RNA binding domain CEJ55_15185 PF00773 RNB domain CEJ55_15185 PF08206 Ribonuclease B OB domain CEJ55_15195 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_15200 PF04480 Protein of unknown function (DUF559) CEJ55_15205 PF00005 ABC transporter CEJ55_15210 PF00005 ABC transporter CEJ55_15210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_15215 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_15215 PF12911 CEJ55_15215 CEJ55_15220 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_15225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_15235 PF10820 CEJ55_15235 CEJ55_15240 PF00324 Amino acid permease CEJ55_15245 PF00120 Glutamine synthetase, catalytic domain CEJ55_15250 PF07722 Peptidase C26 CEJ55_15255 PF01381 Helix-turn-helix CEJ55_15255 PF07883 Cupin domain CEJ55_15260 PF00171 Aldehyde dehydrogenase family CEJ55_15265 PF01266 FAD dependent oxidoreductase CEJ55_15270 PF00202 Aminotransferase class-III CEJ55_15275 PF00158 Sigma-54 interaction domain CEJ55_15275 PF02954 Bacterial regulatory protein, Fis family CEJ55_15280 PF04012 CEJ55_15280 CEJ55_15285 PF06667 CEJ55_15285 CEJ55_15290 PF04024 CEJ55_15290 CEJ55_15295 PF09584 CEJ55_15295 CEJ55_15300 PF00581 Rhodanese-like domain CEJ55_15305 PF00128 Alpha amylase, catalytic domain CEJ55_15310 PF01547 Bacterial extracellular solute-binding protein CEJ55_15315 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_15320 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_15325 PF00107 Zinc-binding dehydrogenase CEJ55_15330 PF01261 Xylose isomerase-like TIM barrel CEJ55_15335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEJ55_15335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEJ55_15345 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_15350 PF00005 ABC transporter CEJ55_15350 PF08402 TOBE domain CEJ55_15355 PF09381 Outer membrane protein G (OmpG) CEJ55_15360 PF00356 Bacterial regulatory proteins, lacI family CEJ55_15360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ55_15365 PF04317 CEJ55_15365 CEJ55_15370 PF05128 CEJ55_15370 CEJ55_15375 PF00158 Sigma-54 interaction domain CEJ55_15380 PF08534 Redoxin CEJ55_15385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEJ55_15385 PF13378 Enolase C-terminal domain-like CEJ55_15390 PF00246 Zinc carboxypeptidase CEJ55_15400 PF12146 Putative lysophospholipase CEJ55_15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_15405 PF03466 LysR substrate binding domain CEJ55_15410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_15415 PF00924 Mechanosensitive ion channel CEJ55_15420 PF10749 CEJ55_15420 CEJ55_15425 PF00582 Universal stress protein family CEJ55_15430 PF00027 Cyclic nucleotide-binding domain CEJ55_15430 PF13545 Crp-like helix-turn-helix domain CEJ55_15435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEJ55_15435 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEJ55_15440 PF03806 CEJ55_15440 CEJ55_15450 PF01546 Peptidase family M20/M25/M40 CEJ55_15455 PF01546 Peptidase family M20/M25/M40 CEJ55_15455 PF07687 Peptidase dimerisation domain CEJ55_15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_15460 PF03466 LysR substrate binding domain CEJ55_15465 PF01713 Smr domain CEJ55_15470 PF00990 GGDEF domain CEJ55_15470 PF08448 PAS fold CEJ55_15475 PF01544 CorA-like Mg2+ transporter protein CEJ55_15485 PF00270 DEAD/DEAH box helicase CEJ55_15485 PF00271 Helicase conserved C-terminal domain CEJ55_15485 PF03880 DbpA RNA binding domain CEJ55_15490 PF01171 PP-loop family CEJ55_15495 PF00589 Phage integrase family CEJ55_15495 PF12167 CEJ55_15495 CEJ55_15500 PF06806 Putative excisionase (DUF1233) CEJ55_15505 PF06688 CEJ55_15505 CEJ55_15510 PF14354 CEJ55_15510 CEJ55_15515 PF03837 CEJ55_15515 CEJ55_15520 PF06630 CEJ55_15520 CEJ55_15520 PF12684 PDDEXK-like domain of unknown function (DUF3799) CEJ55_15530 PF04181 Rtr1/RPAP2 family CEJ55_15545 PF14163 CEJ55_15545 CEJ55_15550 PF07151 CEJ55_15550 CEJ55_15555 PF14555 UBA-like domain CEJ55_15565 PF15943 CEJ55_15565 CEJ55_15570 PF06254 Protein of unknown function (DUF1019) CEJ55_15575 PF07120 CEJ55_15575 CEJ55_15580 PF01695 IstB-like ATP binding protein CEJ55_15590 PF06163 CEJ55_15590 CEJ55_15595 PF03235 CEJ55_15595 CEJ55_15600 PF12476 CEJ55_15600 CEJ55_15600 PF13175 AAA ATPase domain CEJ55_15615 PF01848 CEJ55_15615 CEJ55_15625 PF07105 CEJ55_15625 CEJ55_15630 PF07102 Protein of unknown function (DUF1364) CEJ55_15635 PF06576 CEJ55_15635 CEJ55_15640 PF06519 TolA C-terminal CEJ55_15645 PF06519 TolA C-terminal CEJ55_15650 PF04971 CEJ55_15650 CEJ55_15655 PF00959 Phage lysozyme CEJ55_15665 PF06085 CEJ55_15665 CEJ55_15670 PF02386 Cation transport protein CEJ55_15680 PF02195 ParB-like nuclease domain CEJ55_15695 PF03592 Terminase small subunit CEJ55_15700 PF03237 Terminase-like family CEJ55_15700 PF17289 CEJ55_15700 CEJ55_15705 PF13264 CEJ55_15705 CEJ55_15710 PF04233 CEJ55_15710 CEJ55_15720 PF11651 P22 coat protein - gene protein 5 CEJ55_15745 PF13554 Bacteriophage related domain of unknown function CEJ55_15765 PF06791 CEJ55_15765 CEJ55_15765 PF09718 CEJ55_15765 CEJ55_15770 PF05939 CEJ55_15770 CEJ55_15775 PF05100 CEJ55_15775 CEJ55_15780 PF00877 NlpC/P60 family CEJ55_15780 PF14464 Prokaryotic homologs of the JAB domain CEJ55_15785 PF06805 CEJ55_15785 CEJ55_15790 PF09327 CEJ55_15790 CEJ55_15790 PF12421 CEJ55_15790 CEJ55_15790 PF13550 CEJ55_15790 CEJ55_15795 PF06316 Enterobacterial Ail/Lom protein CEJ55_15800 PF03335 Phage tail fibre repeat CEJ55_15800 PF07484 Phage Tail Collar Domain CEJ55_15800 PF08400 CEJ55_15800 CEJ55_15805 PF02413 CEJ55_15805 CEJ55_15810 PF00239 Resolvase, N terminal domain CEJ55_15810 PF02796 Helix-turn-helix domain of resolvase CEJ55_15820 PF00582 Universal stress protein family CEJ55_15825 PF00267 Gram-negative porin CEJ55_15835 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CEJ55_15835 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CEJ55_15835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_15835 PF10371 Domain of unknown function CEJ55_15835 PF13484 CEJ55_15835 CEJ55_15835 PF17147 CEJ55_15835 CEJ55_15840 PF03891 CEJ55_15840 CEJ55_15845 PF03724 META domain CEJ55_15850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ55_15850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ55_15855 PF11739 CEJ55_15855 CEJ55_15860 PF13617 CEJ55_15860 CEJ55_15865 PF07027 CEJ55_15865 CEJ55_15870 PF12833 Helix-turn-helix domain CEJ55_15870 PF14525 CEJ55_15870 CEJ55_15875 PF00171 Aldehyde dehydrogenase family CEJ55_15880 PF01179 Copper amine oxidase, enzyme domain CEJ55_15880 PF02727 Copper amine oxidase, N2 domain CEJ55_15880 PF02728 Copper amine oxidase, N3 domain CEJ55_15880 PF07833 Copper amine oxidase N-terminal domain CEJ55_15885 PF00171 Aldehyde dehydrogenase family CEJ55_15885 PF01575 MaoC like domain CEJ55_15890 PF05138 Phenylacetic acid catabolic protein CEJ55_15895 PF06243 Phenylacetic acid degradation B CEJ55_15900 PF05138 Phenylacetic acid catabolic protein CEJ55_15905 PF01883 Domain of unknown function DUF59 CEJ55_15910 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_15910 PF00175 Oxidoreductase NAD-binding domain CEJ55_15910 PF00970 Oxidoreductase FAD-binding domain CEJ55_15915 PF00378 Enoyl-CoA hydratase/isomerase family CEJ55_15920 PF00378 Enoyl-CoA hydratase/isomerase family CEJ55_15925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEJ55_15925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEJ55_15930 PF03061 Thioesterase superfamily CEJ55_15935 PF00108 Thiolase, N-terminal domain CEJ55_15935 PF02803 Thiolase, C-terminal domain CEJ55_15940 PF00501 AMP-binding enzyme CEJ55_15940 PF14535 AMP-binding enzyme C-terminal domain CEJ55_15945 PF07848 PaaX-like protein CEJ55_15945 PF08223 PaaX-like protein C-terminal domain CEJ55_15950 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_15955 PF00248 Aldo/keto reductase family CEJ55_15960 PF10971 CEJ55_15960 CEJ55_15965 PF01066 CDP-alcohol phosphatidyltransferase CEJ55_15970 PF01148 Cytidylyltransferase family CEJ55_15975 PF12146 Putative lysophospholipase CEJ55_15975 PF12147 CEJ55_15975 CEJ55_15980 PF00782 Dual specificity phosphatase, catalytic domain CEJ55_15985 PF02525 Flavodoxin-like fold CEJ55_15990 PF00270 DEAD/DEAH box helicase CEJ55_15990 PF00271 Helicase conserved C-terminal domain CEJ55_15990 PF04408 Helicase associated domain (HA2) CEJ55_15990 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CEJ55_15990 PF11898 CEJ55_15990 CEJ55_15995 PF02698 DUF218 domain CEJ55_16000 PF00171 Aldehyde dehydrogenase family CEJ55_16005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEJ55_16005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEJ55_16010 PF01292 Prokaryotic cytochrome b561 CEJ55_16020 PF01848 CEJ55_16020 CEJ55_16025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ55_16025 PF00672 HAMP domain CEJ55_16025 PF02203 Tar ligand binding domain homologue CEJ55_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_16030 PF03466 LysR substrate binding domain CEJ55_16035 PF07063 Domain of unknown function (DUF1338) CEJ55_16045 PF04349 Periplasmic glucan biosynthesis protein, MdoG CEJ55_16055 PF04325 Protein of unknown function (DUF465) CEJ55_16060 PF13302 Acetyltransferase (GNAT) domain CEJ55_16070 PF03595 Voltage-dependent anion channel CEJ55_16075 PF03848 Tellurite resistance protein TehB CEJ55_16080 PF11769 CEJ55_16080 CEJ55_16090 PF01385 CEJ55_16090 CEJ55_16090 PF07282 CEJ55_16090 CEJ55_16090 PF12323 CEJ55_16090 CEJ55_16095 PF03594 CEJ55_16095 CEJ55_16100 PF01381 Helix-turn-helix CEJ55_16100 PF07883 Cupin domain CEJ55_16105 PF01136 CEJ55_16105 CEJ55_16105 PF12392 CEJ55_16105 CEJ55_16110 PF10829 CEJ55_16110 CEJ55_16115 PF07927 YcfA-like protein CEJ55_16120 PF01381 Helix-turn-helix CEJ55_16120 PF15919 CEJ55_16120 CEJ55_16125 PF00155 Aminotransferase class I and II CEJ55_16125 PF00392 Bacterial regulatory proteins, gntR family CEJ55_16130 PF13416 Bacterial extracellular solute-binding protein CEJ55_16135 PF00005 ABC transporter CEJ55_16135 PF08402 TOBE domain CEJ55_16140 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_16145 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_16150 PF00171 Aldehyde dehydrogenase family CEJ55_16165 PF10753 CEJ55_16165 CEJ55_16170 PF10735 CEJ55_16170 CEJ55_16175 PF04657 CEJ55_16175 CEJ55_16180 PF13420 Acetyltransferase (GNAT) domain CEJ55_16190 PF00107 Zinc-binding dehydrogenase CEJ55_16190 PF16884 CEJ55_16190 CEJ55_16195 PF00392 Bacterial regulatory proteins, gntR family CEJ55_16195 PF07729 FCD domain CEJ55_16200 PF00593 TonB dependent receptor CEJ55_16200 PF07715 TonB-dependent Receptor Plug Domain CEJ55_16220 PF00324 Amino acid permease CEJ55_16225 PF13417 Glutathione S-transferase, N-terminal domain CEJ55_16230 PF17520 CEJ55_16230 CEJ55_16265 PF03400 CEJ55_16265 CEJ55_16280 PF13108 CEJ55_16280 CEJ55_16290 PF03527 CEJ55_16290 CEJ55_16290 PF05593 CEJ55_16290 CEJ55_16305 PF01361 Tautomerase enzyme CEJ55_16310 PF01613 Flavin reductase like domain CEJ55_16315 PF00797 N-acetyltransferase CEJ55_16320 PF02567 Phenazine biosynthesis-like protein CEJ55_16325 PF02665 Nitrate reductase gamma subunit CEJ55_16330 PF02613 Nitrate reductase delta subunit CEJ55_16335 PF13247 4Fe-4S dicluster domain CEJ55_16335 PF14711 Respiratory nitrate reductase beta C-terminal CEJ55_16340 PF00384 Molybdopterin oxidoreductase CEJ55_16340 PF01568 Molydopterin dinucleotide binding domain CEJ55_16340 PF14710 Respiratory nitrate reductase alpha N-terminal CEJ55_16345 PF07690 Major Facilitator Superfamily CEJ55_16355 PF00267 Gram-negative porin CEJ55_16360 PF00892 EamA-like transporter family CEJ55_16365 PF00384 Molybdopterin oxidoreductase CEJ55_16365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ55_16370 PF00384 Molybdopterin oxidoreductase CEJ55_16370 PF01568 Molydopterin dinucleotide binding domain CEJ55_16375 PF09163 Formate dehydrogenase N, transmembrane CEJ55_16375 PF12800 4Fe-4S binding domain CEJ55_16375 PF13247 4Fe-4S dicluster domain CEJ55_16380 PF01292 Prokaryotic cytochrome b561 CEJ55_16385 PF01381 Helix-turn-helix CEJ55_16390 PF00107 Zinc-binding dehydrogenase CEJ55_16390 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_16395 PF00390 Malic enzyme, N-terminal domain CEJ55_16395 PF03949 Malic enzyme, NAD binding domain CEJ55_16400 PF08136 CEJ55_16400 CEJ55_16405 PF10684 CEJ55_16405 CEJ55_16415 PF02566 OsmC-like protein CEJ55_16420 PF00005 ABC transporter CEJ55_16420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_16425 PF00005 ABC transporter CEJ55_16425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_16430 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_16430 PF12911 CEJ55_16430 CEJ55_16435 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_16440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_16445 PF01427 D-ala-D-ala dipeptidase CEJ55_16450 PF00563 EAL domain CEJ55_16450 PF00990 GGDEF domain CEJ55_16450 PF13426 PAS domain CEJ55_16455 PF00990 GGDEF domain CEJ55_16455 PF11563 Protoglobin CEJ55_16460 PF02638 CEJ55_16460 CEJ55_16465 PF13520 Amino acid permease CEJ55_16470 PF00282 Pyridoxal-dependent decarboxylase conserved domain CEJ55_16475 PF00675 Insulinase (Peptidase family M16) CEJ55_16475 PF05193 Peptidase M16 inactive domain CEJ55_16480 PF07715 TonB-dependent Receptor Plug Domain CEJ55_16485 PF00005 ABC transporter CEJ55_16485 PF06472 CEJ55_16485 CEJ55_16490 PF04055 Radical SAM superfamily CEJ55_16490 PF13186 Iron-sulfur cluster-binding domain CEJ55_16490 PF13353 4Fe-4S single cluster domain CEJ55_16495 PF00884 Sulfatase CEJ55_16500 PF12833 Helix-turn-helix domain CEJ55_16505 PF17073 CEJ55_16505 CEJ55_16510 PF00384 Molybdopterin oxidoreductase CEJ55_16510 PF01568 Molydopterin dinucleotide binding domain CEJ55_16515 PF09160 FimH, mannose binding CEJ55_16525 PF00419 Fimbrial protein CEJ55_16530 PF00577 Outer membrane usher protein CEJ55_16530 PF13953 PapC C-terminal domain CEJ55_16530 PF13954 PapC N-terminal domain CEJ55_16535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_16535 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_16540 PF00419 Fimbrial protein CEJ55_16560 PF07804 HipA-like C-terminal domain CEJ55_16560 PF13657 HipA N-terminal domain CEJ55_16565 PF01381 Helix-turn-helix CEJ55_16570 PF03212 Pertactin CEJ55_16570 PF03797 Autotransporter beta-domain CEJ55_16570 PF13018 CEJ55_16570 CEJ55_16575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ55_16575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_16580 PF04198 Putative sugar-binding domain CEJ55_16585 PF00005 ABC transporter CEJ55_16590 PF02653 CEJ55_16590 CEJ55_16595 PF02653 CEJ55_16595 CEJ55_16600 PF13407 Periplasmic binding protein domain CEJ55_16605 PF01791 DeoC/LacD family aldolase CEJ55_16610 PF03992 Antibiotic biosynthesis monooxygenase CEJ55_16615 PF13649 Methyltransferase domain CEJ55_16620 PF01062 CEJ55_16620 CEJ55_16630 PF01232 Mannitol dehydrogenase Rossmann domain CEJ55_16630 PF08125 Mannitol dehydrogenase C-terminal domain CEJ55_16640 PF00990 GGDEF domain CEJ55_16650 PF13811 CEJ55_16650 CEJ55_16655 PF04960 Glutaminase CEJ55_16660 PF00171 Aldehyde dehydrogenase family CEJ55_16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_16665 PF03466 LysR substrate binding domain CEJ55_16675 PF07690 Major Facilitator Superfamily CEJ55_16680 PF01914 CEJ55_16680 CEJ55_16685 PF01047 MarR family CEJ55_16690 PF12833 Helix-turn-helix domain CEJ55_16695 PF13999 CEJ55_16695 CEJ55_16700 PF00232 Glycosyl hydrolase family 1 CEJ55_16705 PF02264 LamB porin CEJ55_16705 PF11471 CEJ55_16705 CEJ55_16710 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CEJ55_16715 PF02378 Phosphotransferase system, EIIC CEJ55_16720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_16725 PF00392 Bacterial regulatory proteins, gntR family CEJ55_16725 PF07702 UTRA domain CEJ55_16730 PF00892 EamA-like transporter family CEJ55_16735 PF07690 Major Facilitator Superfamily CEJ55_16745 PF00990 GGDEF domain CEJ55_16750 PF04076 Bacterial OB fold (BOF) protein CEJ55_16755 PF02464 Competence-damaged protein CEJ55_16765 PF01432 Peptidase family M3 CEJ55_16775 PF00106 short chain dehydrogenase CEJ55_16780 PF00392 Bacterial regulatory proteins, gntR family CEJ55_16780 PF07729 FCD domain CEJ55_16785 PF14001 CEJ55_16785 CEJ55_16790 PF01232 Mannitol dehydrogenase Rossmann domain CEJ55_16790 PF08125 Mannitol dehydrogenase C-terminal domain CEJ55_16795 PF07690 Major Facilitator Superfamily CEJ55_16800 PF00107 Zinc-binding dehydrogenase CEJ55_16800 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_16805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEJ55_16805 PF13378 Enolase C-terminal domain-like CEJ55_16815 PF02694 CEJ55_16815 CEJ55_16820 PF06932 CEJ55_16820 CEJ55_16825 PF13302 Acetyltransferase (GNAT) domain CEJ55_16830 PF06788 CEJ55_16830 CEJ55_16835 PF06649 CEJ55_16835 CEJ55_16840 PF00384 Molybdopterin oxidoreductase CEJ55_16840 PF01568 Molydopterin dinucleotide binding domain CEJ55_16840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ55_16845 PF00384 Molybdopterin oxidoreductase CEJ55_16845 PF01568 Molydopterin dinucleotide binding domain CEJ55_16845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ55_16850 PF12800 4Fe-4S binding domain CEJ55_16850 PF13247 4Fe-4S dicluster domain CEJ55_16855 PF04976 CEJ55_16855 CEJ55_16860 PF02613 Nitrate reductase delta subunit CEJ55_16865 PF00654 Voltage gated chloride channel CEJ55_16870 PF13500 AAA domain CEJ55_16875 PF00480 ROK family CEJ55_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_16880 PF03466 LysR substrate binding domain CEJ55_16885 PF07690 Major Facilitator Superfamily CEJ55_16905 PF00089 Trypsin CEJ55_16910 PF00893 Small Multidrug Resistance protein CEJ55_16915 PF00893 Small Multidrug Resistance protein CEJ55_16925 PF01594 CEJ55_16925 CEJ55_16930 PF02233 NAD(P) transhydrogenase beta subunit CEJ55_16935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEJ55_16935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEJ55_16935 PF12769 Domain of unknown function (DUF3814) CEJ55_16940 PF07338 Protein of unknown function (DUF1471) CEJ55_16950 PF13520 Amino acid permease CEJ55_16955 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_16960 PF06942 CEJ55_16960 CEJ55_16965 PF00072 Response regulator receiver domain CEJ55_16965 PF00486 Transcriptional regulatory protein, C terminal CEJ55_16970 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_16975 PF05472 DNA replication terminus site-binding protein (Ter protein) CEJ55_16980 PF00206 Lyase CEJ55_16980 PF10415 Fumarase C C-terminus CEJ55_16985 PF05681 CEJ55_16985 CEJ55_16985 PF05683 Fumarase C-terminus CEJ55_16990 PF01238 Phosphomannose isomerase type I CEJ55_16995 PF06097 CEJ55_16995 CEJ55_17000 PF03573 outer membrane porin, OprD family CEJ55_17005 PF13347 MFS/sugar transport protein CEJ55_17010 PF00703 Glycosyl hydrolases family 2 CEJ55_17010 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEJ55_17010 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEJ55_17015 PF00440 Bacterial regulatory proteins, tetR family CEJ55_17020 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_17025 PF00356 Bacterial regulatory proteins, lacI family CEJ55_17025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ55_17030 PF00367 phosphotransferase system, EIIB CEJ55_17030 PF02378 Phosphotransferase system, EIIC CEJ55_17035 PF00155 Aminotransferase class I and II CEJ55_17040 PF00962 Adenosine/AMP deaminase CEJ55_17045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEJ55_17045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEJ55_17060 PF05321 Haemolysin expression modulating protein CEJ55_17065 PF10754 CEJ55_17065 CEJ55_17070 PF02508 CEJ55_17070 CEJ55_17075 PF04060 Putative Fe-S cluster CEJ55_17075 PF14697 4Fe-4S dicluster domain CEJ55_17080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEJ55_17080 PF10531 SLBB domain CEJ55_17080 PF12838 4Fe-4S dicluster domain CEJ55_17080 PF13375 RnfC Barrel sandwich hybrid domain CEJ55_17085 PF03116 CEJ55_17085 CEJ55_17090 PF04205 FMN-binding domain CEJ55_17095 PF02508 CEJ55_17095 CEJ55_17100 PF00633 Helix-hairpin-helix motif CEJ55_17100 PF00730 HhH-GPD superfamily base excision DNA repair protein CEJ55_17100 PF10576 Iron-sulfur binding domain of endonuclease III CEJ55_17110 PF00854 POT family CEJ55_17115 PF00043 Glutathione S-transferase, C-terminal domain CEJ55_17115 PF13409 Glutathione S-transferase, N-terminal domain CEJ55_17120 PF08543 Phosphomethylpyrimidine kinase CEJ55_17125 PF00579 tRNA synthetases class I (W and Y) CEJ55_17125 PF01479 S4 domain CEJ55_17130 PF01243 Pyridoxamine 5'-phosphate oxidase CEJ55_17130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CEJ55_17135 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CEJ55_17140 PF03702 Uncharacterised protein family (UPF0075) CEJ55_17145 PF05433 CEJ55_17145 CEJ55_17150 PF01047 MarR family CEJ55_17155 PF07869 CEJ55_17155 CEJ55_17160 PF00529 HlyD family secretion protein CEJ55_17160 PF16576 CEJ55_17160 CEJ55_17165 PF04632 CEJ55_17165 CEJ55_17170 PF00080 Copper/zinc superoxide dismutase (SODC) CEJ55_17175 PF00248 Aldo/keto reductase family CEJ55_17180 PF06945 CEJ55_17180 CEJ55_17185 PF00440 Bacterial regulatory proteins, tetR family CEJ55_17185 PF16925 CEJ55_17185 CEJ55_17190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEJ55_17195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEJ55_17200 PF00929 Exonuclease CEJ55_17205 PF00270 DEAD/DEAH box helicase CEJ55_17205 PF00271 Helicase conserved C-terminal domain CEJ55_17205 PF08494 CEJ55_17205 CEJ55_17210 PF00462 Glutaredoxin CEJ55_17215 PF00877 NlpC/P60 family CEJ55_17220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEJ55_17220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEJ55_17225 PF07690 Major Facilitator Superfamily CEJ55_17240 PF00356 Bacterial regulatory proteins, lacI family CEJ55_17240 PF13377 Periplasmic binding protein-like domain CEJ55_17245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_17245 PF03466 LysR substrate binding domain CEJ55_17250 PF07690 Major Facilitator Superfamily CEJ55_17255 PF02353 Mycolic acid cyclopropane synthetase CEJ55_17260 PF00677 Lumazine binding domain CEJ55_17265 PF01554 MatE CEJ55_17270 PF03212 Pertactin CEJ55_17270 PF16168 CEJ55_17270 CEJ55_17285 PF08803 Putative mono-oxygenase ydhR CEJ55_17290 PF13454 FAD-NAD(P)-binding CEJ55_17300 PF01292 Prokaryotic cytochrome b561 CEJ55_17305 PF13247 4Fe-4S dicluster domain CEJ55_17315 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CEJ55_17315 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CEJ55_17320 PF12800 4Fe-4S binding domain CEJ55_17320 PF13247 4Fe-4S dicluster domain CEJ55_17325 PF10965 CEJ55_17325 CEJ55_17330 PF00224 Pyruvate kinase, barrel domain CEJ55_17330 PF02887 Pyruvate kinase, alpha/beta domain CEJ55_17335 PF04728 Lipoprotein leucine-zipper CEJ55_17340 PF01476 LysM domain CEJ55_17340 PF03734 L,D-transpeptidase catalytic domain CEJ55_17345 PF02657 Fe-S metabolism associated domain CEJ55_17350 PF00266 Aminotransferase class-V CEJ55_17355 PF01458 Uncharacterized protein family (UPF0051) CEJ55_17360 PF00005 ABC transporter CEJ55_17365 PF01458 Uncharacterized protein family (UPF0051) CEJ55_17370 PF01521 Iron-sulphur cluster biosynthesis CEJ55_17375 PF15930 CEJ55_17375 CEJ55_17380 PF03061 Thioesterase superfamily CEJ55_17385 PF01565 FAD binding domain CEJ55_17385 PF02913 FAD linked oxidases, C-terminal domain CEJ55_17385 PF13183 4Fe-4S dicluster domain CEJ55_17395 PF01594 CEJ55_17395 CEJ55_17405 PF08965 Domain of unknown function (DUF1870) CEJ55_17410 PF07690 Major Facilitator Superfamily CEJ55_17415 PF07690 Major Facilitator Superfamily CEJ55_17420 PF08501 Shikimate dehydrogenase substrate binding domain CEJ55_17425 PF01487 Type I 3-dehydroquinase CEJ55_17430 PF01144 Coenzyme A transferase CEJ55_17435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEJ55_17435 PF02770 Acyl-CoA dehydrogenase, middle domain CEJ55_17435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEJ55_17440 PF02311 AraC-like ligand binding domain CEJ55_17440 PF12833 Helix-turn-helix domain CEJ55_17450 PF01012 Electron transfer flavoprotein domain CEJ55_17455 PF00766 Electron transfer flavoprotein FAD-binding domain CEJ55_17455 PF01012 Electron transfer flavoprotein domain CEJ55_17460 PF01494 FAD binding domain CEJ55_17470 PF00501 AMP-binding enzyme CEJ55_17470 PF13193 AMP-binding enzyme C-terminal domain CEJ55_17475 PF00391 PEP-utilising enzyme, mobile domain CEJ55_17475 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEJ55_17475 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ55_17485 PF03618 CEJ55_17485 CEJ55_17490 PF00793 DAHP synthetase I family CEJ55_17495 PF10636 Hemin uptake protein hemP CEJ55_17500 PF02696 CEJ55_17500 CEJ55_17505 PF00563 EAL domain CEJ55_17510 PF00877 NlpC/P60 family CEJ55_17515 PF00005 ABC transporter CEJ55_17520 PF00255 Glutathione peroxidase CEJ55_17525 PF01032 FecCD transport family CEJ55_17530 PF00216 Bacterial DNA-binding protein CEJ55_17535 PF01588 Putative tRNA binding domain CEJ55_17535 PF03147 Ferredoxin-fold anticodon binding domain CEJ55_17535 PF03483 B3/4 domain CEJ55_17535 PF03484 tRNA synthetase B5 domain CEJ55_17540 PF01409 tRNA synthetases class II core domain (F) CEJ55_17540 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CEJ55_17550 PF00453 Ribosomal protein L20 CEJ55_17555 PF01632 Ribosomal protein L35 CEJ55_17560 PF00707 Translation initiation factor IF-3, C-terminal domain CEJ55_17560 PF05198 Translation initiation factor IF-3, N-terminal domain CEJ55_17565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEJ55_17565 PF02824 TGS domain CEJ55_17565 PF03129 Anticodon binding domain CEJ55_17565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEJ55_17580 PF04338 Protein of unknown function, DUF481 CEJ55_17585 PF00294 pfkB family carbohydrate kinase CEJ55_17590 PF11080 Protein of unknown function (DUF2622) CEJ55_17595 PF03881 Fructosamine kinase CEJ55_17600 PF14002 CEJ55_17600 CEJ55_17605 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_17610 PF04307 CEJ55_17610 CEJ55_17615 PF00375 Sodium:dicarboxylate symporter family CEJ55_17630 PF10729 Cell division activator CedA CEJ55_17635 PF00199 Catalase CEJ55_17635 PF06628 Catalase-related immune-responsive CEJ55_17640 PF04794 YdjC-like protein CEJ55_17645 PF02056 Family 4 glycosyl hydrolase CEJ55_17645 PF11975 Family 4 glycosyl hydrolase C-terminal domain CEJ55_17650 PF07883 Cupin domain CEJ55_17650 PF12833 Helix-turn-helix domain CEJ55_17655 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CEJ55_17660 PF02378 Phosphotransferase system, EIIC CEJ55_17665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_17675 PF04355 SmpA / OmlA family CEJ55_17680 PF02540 NAD synthase CEJ55_17690 PF05962 HutD CEJ55_17695 PF07813 LTXXQ motif family protein CEJ55_17700 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CEJ55_17705 PF04996 Succinylarginine dihydrolase CEJ55_17710 PF00171 Aldehyde dehydrogenase family CEJ55_17715 PF04958 Arginine N-succinyltransferase beta subunit CEJ55_17720 PF00202 Aminotransferase class-III CEJ55_17730 PF03372 Endonuclease/Exonuclease/phosphatase family CEJ55_17735 PF09335 CEJ55_17735 CEJ55_17745 PF09335 CEJ55_17745 CEJ55_17750 PF02627 Carboxymuconolactone decarboxylase family CEJ55_17755 PF13416 Bacterial extracellular solute-binding protein CEJ55_17760 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_17765 PF00005 ABC transporter CEJ55_17770 PF00581 Rhodanese-like domain CEJ55_17775 PF01066 CDP-alcohol phosphatidyltransferase CEJ55_17780 PF00293 NUDIX domain CEJ55_17785 PF07383 CEJ55_17785 CEJ55_17790 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEJ55_17790 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CEJ55_17795 PF06889 CEJ55_17795 CEJ55_17800 PF01131 DNA topoisomerase CEJ55_17800 PF01751 Toprim domain CEJ55_17805 PF00586 AIR synthase related protein, N-terminal domain CEJ55_17805 PF02769 AIR synthase related protein, C-terminal domain CEJ55_17815 PF00881 Nitroreductase family CEJ55_17825 PF01343 Peptidase family S49 CEJ55_17830 PF00710 Asparaginase CEJ55_17835 PF00857 Isochorismatase family CEJ55_17840 PF00083 Sugar (and other) transporter CEJ55_17845 PF00455 CEJ55_17845 CEJ55_17845 PF08220 DeoR-like helix-turn-helix domain CEJ55_17850 PF00248 Aldo/keto reductase family CEJ55_17855 PF00294 pfkB family carbohydrate kinase CEJ55_17860 PF01116 Fructose-bisphosphate aldolase class-II CEJ55_17865 PF00107 Zinc-binding dehydrogenase CEJ55_17865 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_17870 PF00083 Sugar (and other) transporter CEJ55_17875 PF00107 Zinc-binding dehydrogenase CEJ55_17875 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_17880 PF07023 CEJ55_17880 CEJ55_17885 PF01641 SelR domain CEJ55_17890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEJ55_17890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEJ55_17895 PF01263 Aldose 1-epimerase CEJ55_17900 PF00248 Aldo/keto reductase family CEJ55_17905 PF06629 CEJ55_17905 CEJ55_17910 PF06798 CEJ55_17910 CEJ55_17910 PF08298 PrkA AAA domain CEJ55_17915 PF04285 CEJ55_17915 CEJ55_17920 PF00990 GGDEF domain CEJ55_17920 PF17158 CEJ55_17920 CEJ55_17925 PF00990 GGDEF domain CEJ55_17925 PF17155 CEJ55_17925 CEJ55_17930 PF04073 Aminoacyl-tRNA editing domain CEJ55_17940 PF04284 CEJ55_17940 CEJ55_17945 PF02311 AraC-like ligand binding domain CEJ55_17945 PF12833 Helix-turn-helix domain CEJ55_17950 PF07690 Major Facilitator Superfamily CEJ55_17955 PF04343 CEJ55_17955 CEJ55_17960 PF03891 CEJ55_17960 CEJ55_17965 PF00990 GGDEF domain CEJ55_17965 PF13185 GAF domain CEJ55_17980 PF04226 CEJ55_17980 CEJ55_17985 PF01385 CEJ55_17985 CEJ55_17985 PF07282 CEJ55_17985 CEJ55_17985 PF12323 CEJ55_17985 CEJ55_17990 PF01797 Transposase IS200 like CEJ55_17995 PF08956 Domain of unknown function (DUF1869) CEJ55_18000 PF09313 Domain of unknown function (DUF1971) CEJ55_18005 PF01810 CEJ55_18005 CEJ55_18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_18010 PF03466 LysR substrate binding domain CEJ55_18015 PF00180 Isocitrate/isopropylmalate dehydrogenase CEJ55_18020 PF02028 BCCT family transporter CEJ55_18025 PF00355 Rieske [2Fe-2S] domain CEJ55_18025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CEJ55_18030 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_18030 PF00175 Oxidoreductase NAD-binding domain CEJ55_18030 PF00970 Oxidoreductase FAD-binding domain CEJ55_18035 PF00570 HRDC domain CEJ55_18035 PF01612 3'-5' exonuclease CEJ55_18040 PF00501 AMP-binding enzyme CEJ55_18040 PF13193 AMP-binding enzyme C-terminal domain CEJ55_18045 PF03843 CEJ55_18045 CEJ55_18050 PF00814 Glycoprotease family CEJ55_18055 PF04851 Type III restriction enzyme, res subunit CEJ55_18055 PF13307 Helicase C-terminal domain CEJ55_18060 PF01042 Endoribonuclease L-PSP CEJ55_18065 PF08986 Domain of unknown function (DUF1889) CEJ55_18070 PF03701 CEJ55_18070 CEJ55_18075 PF00425 chorismate binding enzyme CEJ55_18075 PF04715 Anthranilate synthase component I, N terminal region CEJ55_18080 PF00293 NUDIX domain CEJ55_18085 PF03313 CEJ55_18085 CEJ55_18085 PF03315 Serine dehydratase beta chain CEJ55_18090 PF00563 EAL domain CEJ55_18090 PF12792 CEJ55_18090 CEJ55_18095 PF03471 Transporter associated domain CEJ55_18095 PF03741 CEJ55_18095 CEJ55_18110 PF03610 PTS system fructose IIA component CEJ55_18110 PF03830 PTS system sorbose subfamily IIB component CEJ55_18115 PF03609 CEJ55_18115 CEJ55_18120 PF03613 CEJ55_18120 CEJ55_18125 PF06173 CEJ55_18125 CEJ55_18135 PF02659 CEJ55_18135 CEJ55_18140 PF13847 Methyltransferase domain CEJ55_18145 PF00313 'Cold-shock' DNA-binding domain CEJ55_18150 PF10736 CEJ55_18150 CEJ55_18160 PF13974 CEJ55_18160 CEJ55_18165 PF13998 CEJ55_18165 CEJ55_18170 PF13996 CEJ55_18170 CEJ55_18175 PF01614 Bacterial transcriptional regulator CEJ55_18175 PF09339 IclR helix-turn-helix domain CEJ55_18180 PF07690 Major Facilitator Superfamily CEJ55_18185 PF01435 Peptidase family M48 CEJ55_18190 PF00595 PDZ domain (Also known as DHR or GLGF) CEJ55_18190 PF03572 Peptidase family S41 CEJ55_18190 PF11818 CEJ55_18190 CEJ55_18195 PF04352 ProQ/FINO family CEJ55_18195 PF17516 CEJ55_18195 CEJ55_18200 PF13185 GAF domain CEJ55_18205 PF04403 CEJ55_18205 CEJ55_18210 PF02470 CEJ55_18210 CEJ55_18215 PF01189 NOL1/NOP2/sun family CEJ55_18215 PF13636 pre-rRNA processing and ribosome biogenesis CEJ55_18215 PF17125 CEJ55_18215 CEJ55_18220 PF07351 CEJ55_18220 CEJ55_18225 PF07358 CEJ55_18225 CEJ55_18230 PF00149 Calcineurin-like phosphoesterase CEJ55_18235 PF10709 CEJ55_18235 CEJ55_18240 PF05425 CEJ55_18240 CEJ55_18245 PF04234 CopC domain CEJ55_18250 PF06440 DNA polymerase III, theta subunit CEJ55_18255 PF00795 Carbon-nitrogen hydrolase CEJ55_18260 PF00929 Exonuclease CEJ55_18265 PF00326 Prolyl oligopeptidase family CEJ55_18265 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CEJ55_18275 PF04391 CEJ55_18275 CEJ55_18280 PF13995 YebF-like protein CEJ55_18285 PF07130 YebG protein CEJ55_18290 PF02222 ATP-grasp domain CEJ55_18295 PF01081 KDPG and KHG aldolase CEJ55_18300 PF00920 Dehydratase family CEJ55_18305 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CEJ55_18305 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CEJ55_18310 PF01380 SIS domain CEJ55_18310 PF01418 Helix-turn-helix domain, rpiR family CEJ55_18315 PF00224 Pyruvate kinase, barrel domain CEJ55_18315 PF02887 Pyruvate kinase, alpha/beta domain CEJ55_18320 PF03279 CEJ55_18320 CEJ55_18325 PF01476 LysM domain CEJ55_18325 PF01551 Peptidase family M23 CEJ55_18325 PF08525 CEJ55_18325 CEJ55_18330 PF01297 Periplasmic solute binding protein family CEJ55_18335 PF00005 ABC transporter CEJ55_18340 PF00950 CEJ55_18340 CEJ55_18345 PF05491 Holliday junction DNA helicase ruvB C-terminus CEJ55_18345 PF05496 Holliday junction DNA helicase ruvB N-terminus CEJ55_18350 PF01330 RuvA N terminal domain CEJ55_18350 PF07499 RuvA, C-terminal domain CEJ55_18350 PF14520 Helix-hairpin-helix domain CEJ55_18360 PF05708 Orthopoxvirus protein of unknown function (DUF830) CEJ55_18365 PF02075 Crossover junction endodeoxyribonuclease RuvC CEJ55_18370 PF01709 Transcriptional regulator CEJ55_18375 PF00293 NUDIX domain CEJ55_18380 PF00152 tRNA synthetases class II (D, K and N) CEJ55_18380 PF01336 OB-fold nucleic acid binding domain CEJ55_18380 PF02938 GAD domain CEJ55_18385 PF00857 Isochorismatase family CEJ55_18390 PF01904 Protein of unknown function DUF72 CEJ55_18395 PF01124 MAPEG family CEJ55_18400 PF13649 Methyltransferase domain CEJ55_18405 PF08003 Protein of unknown function (DUF1698) CEJ55_18410 PF00384 Molybdopterin oxidoreductase CEJ55_18410 PF01568 Molydopterin dinucleotide binding domain CEJ55_18415 PF03264 NapC/NirT cytochrome c family, N-terminal region CEJ55_18420 PF03932 CutC family CEJ55_18425 PF06185 YecM protein CEJ55_18435 PF00750 tRNA synthetases class I (R) CEJ55_18435 PF03485 Arginyl tRNA synthetase N terminal domain CEJ55_18435 PF05746 DALR anticodon binding domain CEJ55_18440 PF07007 Protein of unknown function (DUF1311) CEJ55_18445 PF06366 CEJ55_18445 CEJ55_18450 PF00771 FHIPEP family CEJ55_18455 PF01312 FlhB HrpN YscU SpaS Family CEJ55_18460 PF04344 Chemotaxis phosphatase, CheZ CEJ55_18465 PF00072 Response regulator receiver domain CEJ55_18470 PF00072 Response regulator receiver domain CEJ55_18470 PF01339 CheB methylesterase CEJ55_18475 PF01739 CheR methyltransferase, SAM binding domain CEJ55_18475 PF03705 CheR methyltransferase, all-alpha domain CEJ55_18480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ55_18480 PF00672 HAMP domain CEJ55_18480 PF02203 Tar ligand binding domain homologue CEJ55_18485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ55_18485 PF00672 HAMP domain CEJ55_18485 PF02203 Tar ligand binding domain homologue CEJ55_18490 PF01584 CheW-like domain CEJ55_18495 PF01584 CheW-like domain CEJ55_18495 PF01627 Hpt domain CEJ55_18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_18495 PF02895 Signal transducing histidine kinase, homodimeric domain CEJ55_18495 PF09078 CheY binding CEJ55_18500 PF00691 OmpA family CEJ55_18500 PF13677 CEJ55_18500 CEJ55_18505 PF01618 CEJ55_18505 CEJ55_18510 PF05280 Flagellar transcriptional activator (FlhC) CEJ55_18515 PF05247 Flagellar transcriptional activator (FlhD) CEJ55_18520 PF00582 Universal stress protein family CEJ55_18525 PF00982 Glycosyltransferase family 20 CEJ55_18530 PF02358 Trehalose-phosphatase CEJ55_18535 PF02653 CEJ55_18535 CEJ55_18540 PF00005 ABC transporter CEJ55_18545 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ55_18555 PF00210 Ferritin-like domain CEJ55_18560 PF10964 CEJ55_18560 CEJ55_18570 PF13992 CEJ55_18570 CEJ55_18575 PF00210 Ferritin-like domain CEJ55_18580 PF10678 CEJ55_18580 CEJ55_18585 PF03222 Tryptophan/tyrosine permease family CEJ55_18590 PF02810 SEC-C motif CEJ55_18590 PF03695 Uncharacterised protein family (UPF0149) CEJ55_18610 PF01066 CDP-alcohol phosphatidyltransferase CEJ55_18615 PF01541 GIY-YIG catalytic domain CEJ55_18615 PF02151 UvrB/uvrC motif CEJ55_18615 PF08459 UvrC Helix-hairpin-helix N-terminal CEJ55_18615 PF14520 Helix-hairpin-helix domain CEJ55_18620 PF00072 Response regulator receiver domain CEJ55_18620 PF00196 Bacterial regulatory proteins, luxR family CEJ55_18625 PF10769 CEJ55_18625 CEJ55_18630 PF00196 Bacterial regulatory proteins, luxR family CEJ55_18630 PF03472 Autoinducer binding domain CEJ55_18635 PF00005 ABC transporter CEJ55_18640 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_18645 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_18650 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_18660 PF04539 Sigma-70 region 3 CEJ55_18660 PF04542 Sigma-70 region 2 CEJ55_18660 PF04545 Sigma-70, region 4 CEJ55_18665 PF00669 Bacterial flagellin N-terminal helical region CEJ55_18665 PF00700 Bacterial flagellin C-terminal helical region CEJ55_18665 PF12445 CEJ55_18665 CEJ55_18670 PF02465 CEJ55_18670 CEJ55_18670 PF07195 CEJ55_18670 CEJ55_18675 PF02561 Flagellar protein FliS CEJ55_18680 PF05400 Flagellar protein FliT CEJ55_18685 PF00128 Alpha amylase, catalytic domain CEJ55_18685 PF02806 Alpha amylase, C-terminal all-beta domain CEJ55_18690 PF13987 YedD-like protein CEJ55_18700 PF04143 CEJ55_18700 CEJ55_18705 PF01206 Sulfurtransferase TusA CEJ55_18710 PF02586 Uncharacterised ACR, COG2135 CEJ55_18720 PF02049 CEJ55_18720 CEJ55_18725 PF01514 Secretory protein of YscJ/FliF family CEJ55_18725 PF08345 CEJ55_18725 CEJ55_18730 PF01706 FliG C-terminal domain CEJ55_18730 PF14841 FliG middle domain CEJ55_18730 PF14842 FliG N-terminal domain CEJ55_18735 PF02108 CEJ55_18735 CEJ55_18740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ55_18745 PF02050 Flagellar FliJ protein CEJ55_18750 PF02120 Flagellar hook-length control protein FliK CEJ55_18755 PF03748 CEJ55_18755 CEJ55_18760 PF01052 Surface presentation of antigens (SPOA) CEJ55_18760 PF02154 Flagellar motor switch protein FliM CEJ55_18765 PF01052 Surface presentation of antigens (SPOA) CEJ55_18765 PF16973 CEJ55_18765 CEJ55_18770 PF04347 CEJ55_18770 CEJ55_18775 PF00813 CEJ55_18775 CEJ55_18780 PF01313 CEJ55_18780 CEJ55_18785 PF01311 CEJ55_18785 CEJ55_18790 PF00196 Bacterial regulatory proteins, luxR family CEJ55_18795 PF10781 CEJ55_18795 CEJ55_18805 PF10733 CEJ55_18805 CEJ55_18810 PF08282 haloacid dehalogenase-like hydrolase CEJ55_18815 PF00990 GGDEF domain CEJ55_18815 PF17151 CEJ55_18815 CEJ55_18825 PF09926 CEJ55_18825 CEJ55_18830 PF05661 CEJ55_18830 CEJ55_18835 PF00892 EamA-like transporter family CEJ55_18840 PF03852 DNA mismatch endonuclease Vsr CEJ55_18845 PF00145 C-5 cytosine-specific DNA methylase CEJ55_18850 PF01966 HD domain CEJ55_18860 PF00267 Gram-negative porin CEJ55_18875 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_18880 PF00072 Response regulator receiver domain CEJ55_18880 PF00486 Transcriptional regulatory protein, C terminal CEJ55_18885 PF00576 HIUase/Transthyretin family CEJ55_18890 PF00174 Oxidoreductase molybdopterin binding domain CEJ55_18895 PF01794 CEJ55_18895 CEJ55_18900 PF09223 YodA lipocalin-like domain CEJ55_18905 PF01292 Prokaryotic cytochrome b561 CEJ55_18915 PF08400 CEJ55_18915 CEJ55_18920 PF05954 Phage late control gene D protein (GPD) CEJ55_18925 PF05489 Phage Tail Protein X CEJ55_18930 PF14373 CEJ55_18930 CEJ55_18935 PF06995 CEJ55_18935 CEJ55_18945 PF10109 CEJ55_18945 CEJ55_18950 PF04985 CEJ55_18950 CEJ55_18955 PF04984 Phage tail sheath protein CEJ55_18955 PF17482 CEJ55_18955 CEJ55_18965 PF09684 CEJ55_18965 CEJ55_18970 PF04865 CEJ55_18970 CEJ55_18975 PF04965 Gene 25-like lysozyme CEJ55_18980 PF04717 Phage-related baseplate assembly protein CEJ55_19000 PF14000 DNA packaging protein FI CEJ55_19005 PF03864 Phage major capsid protein E CEJ55_19015 PF01343 Peptidase family S49 CEJ55_19020 PF05136 CEJ55_19020 CEJ55_19025 PF02831 gpW CEJ55_19030 PF05876 CEJ55_19030 CEJ55_19060 PF05449 CEJ55_19060 CEJ55_19065 PF16931 CEJ55_19065 CEJ55_19070 PF06323 CEJ55_19070 CEJ55_19075 PF07102 Protein of unknown function (DUF1364) CEJ55_19080 PF07105 CEJ55_19080 CEJ55_19100 PF06114 Domain of unknown function (DUF955) CEJ55_19115 PF13455 CEJ55_19115 CEJ55_19130 PF10543 CEJ55_19130 CEJ55_19155 PF00772 DnaB-like helicase N terminal domain CEJ55_19155 PF03796 DnaB-like helicase C terminal domain CEJ55_19170 PF06254 Protein of unknown function (DUF1019) CEJ55_19175 PF14549 DNA-binding transcriptional regulator Cro CEJ55_19180 PF01381 Helix-turn-helix CEJ55_19200 PF05565 CEJ55_19200 CEJ55_19215 PF13986 CEJ55_19215 CEJ55_19220 PF00589 Phage integrase family CEJ55_19230 PF06167 Glucose-regulated metallo-peptidase M90 CEJ55_19245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ55_19250 PF00083 Sugar (and other) transporter CEJ55_19250 PF07690 Major Facilitator Superfamily CEJ55_19255 PF01048 Phosphorylase superfamily CEJ55_19255 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CEJ55_19260 PF01709 Transcriptional regulator CEJ55_19275 PF01554 MatE CEJ55_19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_19285 PF03466 LysR substrate binding domain CEJ55_19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_19290 PF03466 LysR substrate binding domain CEJ55_19300 PF03734 L,D-transpeptidase catalytic domain CEJ55_19305 PF02277 Phosphoribosyltransferase CEJ55_19310 PF02654 CEJ55_19310 CEJ55_19315 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CEJ55_19325 PF10114 CEJ55_19325 CEJ55_19325 PF12833 Helix-turn-helix domain CEJ55_19330 PF00230 Major intrinsic protein CEJ55_19335 PF00936 BMC domain CEJ55_19340 PF00936 BMC domain CEJ55_19345 PF02286 Dehydratase large subunit CEJ55_19350 PF02288 Dehydratase medium subunit CEJ55_19355 PF02287 Dehydratase small subunit CEJ55_19360 PF08841 Diol dehydratase reactivase ATPase-like domain CEJ55_19365 PF02288 Dehydratase medium subunit CEJ55_19370 PF00936 BMC domain CEJ55_19375 PF00936 BMC domain CEJ55_19380 PF06130 CEJ55_19380 CEJ55_19385 PF15953 CEJ55_19385 CEJ55_19390 PF03319 Ethanolamine utilisation protein EutN/carboxysome CEJ55_19395 PF01923 Cobalamin adenosyltransferase CEJ55_19395 PF03928 Domain of unknown function (DUF336) CEJ55_19400 PF00171 Aldehyde dehydrogenase family CEJ55_19405 PF00465 Iron-containing alcohol dehydrogenase CEJ55_19410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEJ55_19410 PF10531 SLBB domain CEJ55_19410 PF13375 RnfC Barrel sandwich hybrid domain CEJ55_19410 PF13534 4Fe-4S dicluster domain CEJ55_19415 PF00936 BMC domain CEJ55_19420 PF00936 BMC domain CEJ55_19425 PF10662 Ethanolamine utilisation - propanediol utilisation CEJ55_19430 PF04363 CEJ55_19430 CEJ55_19435 PF04632 CEJ55_19435 CEJ55_19440 PF06445 GyrI-like small molecule binding domain CEJ55_19445 PF00768 D-alanyl-D-alanine carboxypeptidase CEJ55_19445 PF07943 Penicillin-binding protein 5, C-terminal domain CEJ55_19450 PF00929 Exonuclease CEJ55_19450 PF08411 Exonuclease C-terminal CEJ55_19455 PF01206 Sulfurtransferase TusA CEJ55_19460 PF04143 CEJ55_19460 CEJ55_19465 PF13520 Amino acid permease CEJ55_19470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_19470 PF03466 LysR substrate binding domain CEJ55_19475 PF01370 NAD dependent epimerase/dehydratase family CEJ55_19480 PF06769 Plasmid encoded toxin Txe CEJ55_19485 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CEJ55_19490 PF08047 CEJ55_19490 CEJ55_19500 PF01634 ATP phosphoribosyltransferase CEJ55_19500 PF08029 HisG, C-terminal domain CEJ55_19505 PF00815 Histidinol dehydrogenase CEJ55_19510 PF00155 Aminotransferase class I and II CEJ55_19515 PF00475 Imidazoleglycerol-phosphate dehydratase CEJ55_19515 PF08645 Polynucleotide kinase 3 phosphatase CEJ55_19520 PF00117 Glutamine amidotransferase class-I CEJ55_19525 PF00977 Histidine biosynthesis protein CEJ55_19530 PF00977 Histidine biosynthesis protein CEJ55_19535 PF01502 Phosphoribosyl-AMP cyclohydrolase CEJ55_19535 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CEJ55_19540 PF02706 Chain length determinant protein CEJ55_19545 PF16363 CEJ55_19545 CEJ55_19550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEJ55_19550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEJ55_19555 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CEJ55_19555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEJ55_19560 PF00535 Glycosyl transferase family 2 CEJ55_19565 PF00534 Glycosyl transferases group 1 CEJ55_19575 PF01943 CEJ55_19575 CEJ55_19580 PF00534 Glycosyl transferases group 1 CEJ55_19580 PF13439 Glycosyltransferase Family 4 CEJ55_19590 PF12710 haloacid dehalogenase-like hydrolase CEJ55_19600 PF00483 Nucleotidyl transferase CEJ55_19605 PF01370 NAD dependent epimerase/dehydratase family CEJ55_19615 PF00534 Glycosyl transferases group 1 CEJ55_19615 PF13439 Glycosyltransferase Family 4 CEJ55_19620 PF04230 CEJ55_19620 CEJ55_19625 PF13440 CEJ55_19625 CEJ55_19630 PF02397 CEJ55_19630 CEJ55_19630 PF13727 CoA-binding domain CEJ55_19635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEJ55_19635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEJ55_19635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEJ55_19635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEJ55_19640 PF00483 Nucleotidyl transferase CEJ55_19640 PF01050 Mannose-6-phosphate isomerase CEJ55_19645 PF00534 Glycosyl transferases group 1 CEJ55_19645 PF13579 Glycosyl transferase 4-like domain CEJ55_19650 PF00293 NUDIX domain CEJ55_19655 PF01370 NAD dependent epimerase/dehydratase family CEJ55_19660 PF16363 CEJ55_19660 CEJ55_19665 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_19670 PF00535 Glycosyl transferase family 2 CEJ55_19680 PF00534 Glycosyl transferases group 1 CEJ55_19680 PF13439 Glycosyltransferase Family 4 CEJ55_19685 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_19690 PF00535 Glycosyl transferase family 2 CEJ55_19695 PF02706 Chain length determinant protein CEJ55_19695 PF13614 AAA domain CEJ55_19695 PF13807 CEJ55_19695 CEJ55_19700 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEJ55_19705 PF02563 Polysaccharide biosynthesis/export protein CEJ55_19705 PF10531 SLBB domain CEJ55_19710 PF00571 CBS domain CEJ55_19710 PF03471 Transporter associated domain CEJ55_19710 PF03741 CEJ55_19710 CEJ55_19715 PF05170 CEJ55_19715 CEJ55_19720 PF00692 dUTPase CEJ55_19725 PF00485 Phosphoribulokinase / Uridine kinase family CEJ55_19730 PF00563 EAL domain CEJ55_19730 PF00990 GGDEF domain CEJ55_19730 PF05231 CEJ55_19730 CEJ55_19730 PF08447 PAS fold CEJ55_19730 PF08448 PAS fold CEJ55_19730 PF13426 PAS domain CEJ55_19735 PF00730 HhH-GPD superfamily base excision DNA repair protein CEJ55_19735 PF06029 AlkA N-terminal domain CEJ55_19740 PF00012 Hsp70 protein CEJ55_19750 PF13672 Protein phosphatase 2C CEJ55_19755 PF00092 von Willebrand factor type A domain CEJ55_19760 PF13956 CEJ55_19760 CEJ55_19765 PF13437 HlyD family secretion protein CEJ55_19765 PF13533 Biotin-lipoyl like CEJ55_19770 PF00873 AcrB/AcrD/AcrF family CEJ55_19775 PF00873 AcrB/AcrD/AcrF family CEJ55_19780 PF07690 Major Facilitator Superfamily CEJ55_19785 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_19785 PF00672 HAMP domain CEJ55_19785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_19790 PF00072 Response regulator receiver domain CEJ55_19790 PF00486 Transcriptional regulatory protein, C terminal CEJ55_19795 PF07411 Domain of unknown function (DUF1508) CEJ55_19800 PF03693 Uncharacterised protein family (UPF0156) CEJ55_19805 PF05016 Plasmid stabilisation system protein CEJ55_19810 PF01136 CEJ55_19810 CEJ55_19810 PF16325 CEJ55_19810 CEJ55_19825 PF00781 Diacylglycerol kinase catalytic domain CEJ55_19830 PF00455 CEJ55_19830 CEJ55_19830 PF08220 DeoR-like helix-turn-helix domain CEJ55_19835 PF00107 Zinc-binding dehydrogenase CEJ55_19835 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_19840 PF03611 CEJ55_19840 CEJ55_19845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_19850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_19855 PF08013 Tagatose 6 phosphate kinase CEJ55_19860 PF01116 Fructose-bisphosphate aldolase class-II CEJ55_19870 PF01791 DeoC/LacD family aldolase CEJ55_19875 PF03825 CEJ55_19875 CEJ55_19880 PF03747 ADP-ribosylglycohydrolase CEJ55_19885 PF00294 pfkB family carbohydrate kinase CEJ55_19890 PF00392 Bacterial regulatory proteins, gntR family CEJ55_19890 PF07702 UTRA domain CEJ55_19895 PF01183 Glycosyl hydrolases family 25 CEJ55_19900 PF08543 Phosphomethylpyrimidine kinase CEJ55_19905 PF02110 Hydroxyethylthiazole kinase family CEJ55_19910 PF02583 Metal-sensitive transcriptional repressor CEJ55_19915 PF03824 CEJ55_19915 CEJ55_19920 PF11776 Domain of unknown function (DUF3315) CEJ55_19925 PF00419 Fimbrial protein CEJ55_19930 PF00577 Outer membrane usher protein CEJ55_19930 PF13953 PapC C-terminal domain CEJ55_19930 PF13954 PapC N-terminal domain CEJ55_19935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_19935 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_19940 PF00419 Fimbrial protein CEJ55_19950 PF10836 CEJ55_19950 CEJ55_19955 PF10609 ParA/MinD ATPase like CEJ55_19960 PF01588 Putative tRNA binding domain CEJ55_19960 PF09334 tRNA synthetases class I (M) CEJ55_19965 PF05406 WGR domain CEJ55_19965 PF13569 CEJ55_19965 CEJ55_19970 PF13569 CEJ55_19970 CEJ55_19980 PF07728 AAA domain (dynein-related subfamily) CEJ55_19990 PF05762 VWA domain containing CoxE-like protein CEJ55_19995 PF04434 CEJ55_19995 CEJ55_20000 PF06998 Protein of unknown function (DUF1307) CEJ55_20005 PF07308 CEJ55_20005 CEJ55_20010 PF00072 Response regulator receiver domain CEJ55_20010 PF04397 LytTr DNA-binding domain CEJ55_20015 PF06580 CEJ55_20015 CEJ55_20015 PF07694 5TMR of 5TMR-LYT CEJ55_20020 PF13411 MerR HTH family regulatory protein CEJ55_20030 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_20035 PF00005 ABC transporter CEJ55_20040 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_20045 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEJ55_20050 PF00933 Glycosyl hydrolase family 3 N terminal domain CEJ55_20050 PF01915 Glycosyl hydrolase family 3 C-terminal domain CEJ55_20050 PF14310 Fibronectin type III-like domain CEJ55_20055 PF01565 FAD binding domain CEJ55_20055 PF09330 D-lactate dehydrogenase, membrane binding CEJ55_20060 PF00768 D-alanyl-D-alanine carboxypeptidase CEJ55_20065 PF06930 CEJ55_20065 CEJ55_20070 PF09335 CEJ55_20070 CEJ55_20075 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_20080 PF02321 Outer membrane efflux protein CEJ55_20100 PF01207 Dihydrouridine synthase (Dus) CEJ55_20105 PF03788 CEJ55_20105 CEJ55_20110 PF04172 CEJ55_20110 CEJ55_20115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ55_20115 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ55_20120 PF02698 DUF218 domain CEJ55_20125 PF10808 CEJ55_20125 CEJ55_20130 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_20130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEJ55_20135 PF01180 Dihydroorotate dehydrogenase CEJ55_20135 PF14697 4Fe-4S dicluster domain CEJ55_20140 PF02653 CEJ55_20140 CEJ55_20145 PF00005 ABC transporter CEJ55_20150 PF13407 Periplasmic binding protein domain CEJ55_20155 PF00356 Bacterial regulatory proteins, lacI family CEJ55_20155 PF13377 Periplasmic binding protein-like domain CEJ55_20165 PF04235 CEJ55_20165 CEJ55_20170 PF01227 GTP cyclohydrolase I CEJ55_20185 PF00756 Putative esterase CEJ55_20190 PF00593 TonB dependent receptor CEJ55_20190 PF07715 TonB-dependent Receptor Plug Domain CEJ55_20200 PF00324 Amino acid permease CEJ55_20210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_20210 PF03466 LysR substrate binding domain CEJ55_20215 PF03601 CEJ55_20215 CEJ55_20220 PF01261 Xylose isomerase-like TIM barrel CEJ55_20225 PF00294 pfkB family carbohydrate kinase CEJ55_20225 PF13412 Winged helix-turn-helix DNA-binding CEJ55_20230 PF01773 Na+ dependent nucleoside transporter N-terminus CEJ55_20230 PF07662 Na+ dependent nucleoside transporter C-terminus CEJ55_20235 PF01156 Inosine-uridine preferring nucleoside hydrolase CEJ55_20240 PF00027 Cyclic nucleotide-binding domain CEJ55_20245 PF01773 Na+ dependent nucleoside transporter N-terminus CEJ55_20245 PF07662 Na+ dependent nucleoside transporter C-terminus CEJ55_20250 PF04227 Indigoidine synthase A like protein CEJ55_20255 PF00294 pfkB family carbohydrate kinase CEJ55_20260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_20260 PF02378 Phosphotransferase system, EIIC CEJ55_20265 PF00294 pfkB family carbohydrate kinase CEJ55_20270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_20270 PF00381 PTS HPr component phosphorylation site CEJ55_20275 PF07690 Major Facilitator Superfamily CEJ55_20280 PF03692 CEJ55_20280 CEJ55_20285 PF01132 Elongation factor P (EF-P) OB domain CEJ55_20285 PF08207 Elongation factor P (EF-P) KOW-like domain CEJ55_20285 PF09285 Elongation factor P, C-terminal CEJ55_20290 PF01232 Mannitol dehydrogenase Rossmann domain CEJ55_20290 PF08125 Mannitol dehydrogenase C-terminal domain CEJ55_20295 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEJ55_20295 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEJ55_20300 PF01569 PAP2 superfamily CEJ55_20305 PF00877 NlpC/P60 family CEJ55_20310 PF00563 EAL domain CEJ55_20310 PF12792 CEJ55_20310 CEJ55_20315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ55_20320 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_20325 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_20325 PF12911 CEJ55_20325 CEJ55_20330 PF00005 ABC transporter CEJ55_20330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ55_20335 PF13989 CEJ55_20335 CEJ55_20345 PF07690 Major Facilitator Superfamily CEJ55_20350 PF00849 RNA pseudouridylate synthase CEJ55_20350 PF01479 S4 domain CEJ55_20360 PF00271 Helicase conserved C-terminal domain CEJ55_20360 PF04851 Type III restriction enzyme, res subunit CEJ55_20365 PF01386 Ribosomal L25p family CEJ55_20370 PF04245 CEJ55_20370 CEJ55_20375 PF07208 Protein of unknown function (DUF1414) CEJ55_20380 PF00884 Sulfatase CEJ55_20380 PF11893 CEJ55_20380 CEJ55_20400 PF00072 Response regulator receiver domain CEJ55_20400 PF00196 Bacterial regulatory proteins, luxR family CEJ55_20405 PF03918 Cytochrome C biogenesis protein CEJ55_20405 PF14559 Tetratricopeptide repeat CEJ55_20410 PF08534 Redoxin CEJ55_20415 PF01578 CEJ55_20415 CEJ55_20415 PF16327 CEJ55_20415 CEJ55_20420 PF03100 CcmE CEJ55_20425 PF04995 CEJ55_20425 CEJ55_20430 PF01578 CEJ55_20430 CEJ55_20435 PF03379 CEJ55_20435 CEJ55_20440 PF00005 ABC transporter CEJ55_20445 PF03264 NapC/NirT cytochrome c family, N-terminal region CEJ55_20450 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CEJ55_20455 PF12801 CEJ55_20455 CEJ55_20455 PF13237 4Fe-4S dicluster domain CEJ55_20460 PF12800 4Fe-4S binding domain CEJ55_20460 PF12838 4Fe-4S dicluster domain CEJ55_20465 PF00384 Molybdopterin oxidoreductase CEJ55_20465 PF01568 Molydopterin dinucleotide binding domain CEJ55_20465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ55_20470 PF03927 NapD protein CEJ55_20475 PF00037 4Fe-4S binding domain CEJ55_20475 PF12800 4Fe-4S binding domain CEJ55_20475 PF13187 4Fe-4S dicluster domain CEJ55_20485 PF03974 Ecotin CEJ55_20490 PF06039 CEJ55_20490 CEJ55_20495 PF00005 ABC transporter CEJ55_20500 PF13532 2OG-Fe(II) oxygenase superfamily CEJ55_20505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEJ55_20505 PF02805 Metal binding domain of Ada CEJ55_20505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEJ55_20505 PF12833 Helix-turn-helix domain CEJ55_20510 PF02424 ApbE family CEJ55_20515 PF00267 Gram-negative porin CEJ55_20530 PF01627 Hpt domain CEJ55_20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_20530 PF16359 CEJ55_20530 CEJ55_20535 PF00072 Response regulator receiver domain CEJ55_20535 PF00196 Bacterial regulatory proteins, luxR family CEJ55_20540 PF00072 Response regulator receiver domain CEJ55_20540 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_20540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_20540 PF09456 RcsC Alpha-Beta-Loop (ABL) CEJ55_20545 PF09906 CEJ55_20545 CEJ55_20550 PF08486 CEJ55_20550 CEJ55_20550 PF10062 CEJ55_20550 CEJ55_20555 PF00207 Alpha-2-macroglobulin family CEJ55_20555 PF01835 MG2 domain CEJ55_20555 PF07703 Alpha-2-macroglobulin family N-terminal region CEJ55_20560 PF06672 CEJ55_20560 CEJ55_20565 PF09909 CEJ55_20565 CEJ55_20570 PF00521 DNA gyrase/topoisomerase IV, subunit A CEJ55_20570 PF03989 DNA gyrase C-terminal domain, beta-propeller CEJ55_20575 PF13489 Methyltransferase domain CEJ55_20580 PF02415 CEJ55_20580 CEJ55_20580 PF03797 Autotransporter beta-domain CEJ55_20580 PF12951 CEJ55_20580 CEJ55_20590 PF00317 Ribonucleotide reductase, all-alpha domain CEJ55_20590 PF02867 Ribonucleotide reductase, barrel domain CEJ55_20590 PF03477 ATP cone domain CEJ55_20595 PF00268 Ribonucleotide reductase, small chain CEJ55_20600 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_20605 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family CEJ55_20620 PF03009 Glycerophosphoryl diester phosphodiesterase family CEJ55_20625 PF07690 Major Facilitator Superfamily CEJ55_20630 PF01266 FAD dependent oxidoreductase CEJ55_20630 PF04324 BFD-like [2Fe-2S] binding domain CEJ55_20635 PF00890 FAD binding domain CEJ55_20640 PF02754 CEJ55_20640 CEJ55_20640 PF13183 4Fe-4S dicluster domain CEJ55_20645 PF04754 CEJ55_20645 CEJ55_20650 PF03328 HpcH/HpaI aldolase/citrate lyase family CEJ55_20655 PF00994 Probable molybdopterin binding domain CEJ55_20660 PF07437 CEJ55_20660 CEJ55_20665 PF00293 NUDIX domain CEJ55_20670 PF00300 Histidine phosphatase superfamily (branch 1) CEJ55_20675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEJ55_20680 PF00535 Glycosyl transferase family 2 CEJ55_20685 PF00551 Formyl transferase CEJ55_20685 PF01370 NAD dependent epimerase/dehydratase family CEJ55_20685 PF02911 Formyl transferase, C-terminal domain CEJ55_20690 PF01522 Polysaccharide deacetylase CEJ55_20695 PF02366 CEJ55_20695 CEJ55_20700 PF00892 EamA-like transporter family CEJ55_20710 PF11183 Polymyxin resistance protein PmrD CEJ55_20715 PF00501 AMP-binding enzyme CEJ55_20715 PF13193 AMP-binding enzyme C-terminal domain CEJ55_20720 PF13378 Enolase C-terminal domain-like CEJ55_20725 PF00378 Enoyl-CoA hydratase/isomerase family CEJ55_20730 PF12697 Alpha/beta hydrolase family CEJ55_20735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_20735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ55_20735 PF16582 CEJ55_20735 CEJ55_20740 PF00425 chorismate binding enzyme CEJ55_20745 PF05957 CEJ55_20745 CEJ55_20750 PF13673 Acetyltransferase (GNAT) domain CEJ55_20755 PF12706 Beta-lactamase superfamily domain CEJ55_20765 PF02902 Ulp1 protease family, C-terminal catalytic domain CEJ55_20775 PF08974 Domain of unknown function (DUF1877) CEJ55_20780 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CEJ55_20785 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CEJ55_20790 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CEJ55_20790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEJ55_20795 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEJ55_20800 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CEJ55_20805 PF12838 4Fe-4S dicluster domain CEJ55_20810 PF00146 NADH dehydrogenase CEJ55_20815 PF00384 Molybdopterin oxidoreductase CEJ55_20815 PF01568 Molydopterin dinucleotide binding domain CEJ55_20815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ55_20815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEJ55_20815 PF13510 2Fe-2S iron-sulfur cluster binding domain CEJ55_20820 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEJ55_20820 PF10531 SLBB domain CEJ55_20820 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CEJ55_20825 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin CEJ55_20830 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CEJ55_20830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CEJ55_20835 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEJ55_20840 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CEJ55_20845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_20845 PF03466 LysR substrate binding domain CEJ55_20855 PF00155 Aminotransferase class I and II CEJ55_20860 PF13023 HD domain CEJ55_20865 PF02080 TrkA-C domain CEJ55_20865 PF03600 Citrate transporter CEJ55_20870 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_20875 PF03887 YfbU domain CEJ55_20880 PF04217 CEJ55_20880 CEJ55_20885 PF00871 Acetokinase family CEJ55_20890 PF01515 Phosphate acetyl/butaryl transferase CEJ55_20890 PF07085 DRTGG domain CEJ55_20890 PF13500 AAA domain CEJ55_20895 PF03606 CEJ55_20895 CEJ55_20900 PF00293 NUDIX domain CEJ55_20905 PF12850 Calcineurin-like phosphoesterase superfamily domain CEJ55_20910 PF13417 Glutathione S-transferase, N-terminal domain CEJ55_20910 PF14834 Glutathione S-transferase, C-terminal domain CEJ55_20915 PF00043 Glutathione S-transferase, C-terminal domain CEJ55_20915 PF02798 Glutathione S-transferase, N-terminal domain CEJ55_20920 PF02152 Dihydroneopterin aldolase CEJ55_20925 PF01370 NAD dependent epimerase/dehydratase family CEJ55_20925 PF08338 Domain of unknown function (DUF1731) CEJ55_20930 PF04754 CEJ55_20930 CEJ55_20935 PF00005 ABC transporter CEJ55_20940 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_20945 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_20950 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_20955 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_20960 PF02441 Flavoprotein CEJ55_20965 PF00156 Phosphoribosyl transferase domain CEJ55_20965 PF13522 Glutamine amidotransferase domain CEJ55_20970 PF02674 CEJ55_20970 CEJ55_20975 PF05036 Sporulation related domain CEJ55_20980 PF02875 Mur ligase family, glutamate ligase domain CEJ55_20980 PF08245 Mur ligase middle domain CEJ55_20985 PF01039 Carboxyl transferase domain CEJ55_20990 PF09335 CEJ55_20990 CEJ55_20995 PF01416 tRNA pseudouridine synthase CEJ55_21000 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ55_21000 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEJ55_21005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ55_21005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ55_21005 PF11890 Domain of unknown function (DUF3410) CEJ55_21015 PF07690 Major Facilitator Superfamily CEJ55_21025 PF00109 Beta-ketoacyl synthase, N-terminal domain CEJ55_21025 PF02801 Beta-ketoacyl synthase, C-terminal domain CEJ55_21030 PF01266 FAD dependent oxidoreductase CEJ55_21030 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CEJ55_21035 PF08891 CEJ55_21035 CEJ55_21040 PF04315 CEJ55_21040 CEJ55_21045 PF01925 CEJ55_21045 CEJ55_21050 PF03411 Penicillin-insensitive murein endopeptidase CEJ55_21055 PF01264 Chorismate synthase CEJ55_21060 PF05175 Methyltransferase small domain CEJ55_21065 PF01713 Smr domain CEJ55_21070 PF11245 CEJ55_21070 CEJ55_21075 PF00419 Fimbrial protein CEJ55_21080 PF00419 Fimbrial protein CEJ55_21085 PF00419 Fimbrial protein CEJ55_21090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CEJ55_21090 PF02753 Pili assembly chaperone PapD, C-terminal domain CEJ55_21095 PF00577 Outer membrane usher protein CEJ55_21095 PF13953 PapC C-terminal domain CEJ55_21095 PF13954 PapC N-terminal domain CEJ55_21100 PF00419 Fimbrial protein CEJ55_21105 PF00300 Histidine phosphatase superfamily (branch 1) CEJ55_21110 PF00378 Enoyl-CoA hydratase/isomerase family CEJ55_21110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEJ55_21110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEJ55_21115 PF00108 Thiolase, N-terminal domain CEJ55_21115 PF02803 Thiolase, C-terminal domain CEJ55_21120 PF04175 Protein of unknown function (DUF406) CEJ55_21130 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEJ55_21145 PF04333 CEJ55_21145 CEJ55_21155 PF01226 Formate/nitrite transporter CEJ55_21165 PF00589 Phage integrase family CEJ55_21165 PF13356 Domain of unknown function (DUF4102) CEJ55_21170 PF01757 CEJ55_21170 CEJ55_21175 PF09008 Head binding CEJ55_21180 PF03869 Arc-like DNA binding domain CEJ55_21180 PF11423 Regulatory protein Mnt CEJ55_21190 PF16928 CEJ55_21190 CEJ55_21200 PF11039 CEJ55_21200 CEJ55_21205 PF16532 CEJ55_21205 CEJ55_21210 PF11134 CEJ55_21210 CEJ55_21215 PF11650 P22 tail accessory factor CEJ55_21225 PF11651 P22 coat protein - gene protein 5 CEJ55_21230 PF13392 HNH endonuclease CEJ55_21235 PF09306 Bacteriophage, scaffolding protein CEJ55_21240 PF16510 CEJ55_21240 CEJ55_21245 PF03237 Terminase-like family CEJ55_21245 PF17289 CEJ55_21245 CEJ55_21250 PF16677 CEJ55_21250 CEJ55_21255 PF10834 CEJ55_21255 CEJ55_21260 PF13876 CEJ55_21260 CEJ55_21265 PF04383 KilA-N domain CEJ55_21275 PF00959 Phage lysozyme CEJ55_21280 PF05106 CEJ55_21280 CEJ55_21290 PF03589 Antitermination protein CEJ55_21295 PF00149 Calcineurin-like phosphoesterase CEJ55_21300 PF06322 CEJ55_21300 CEJ55_21305 PF05766 CEJ55_21305 CEJ55_21310 PF05810 CEJ55_21310 CEJ55_21320 PF05322 CEJ55_21320 CEJ55_21325 PF17466 CEJ55_21325 CEJ55_21330 PF05063 CEJ55_21330 CEJ55_21335 PF05772 NinB protein CEJ55_21345 PF00772 DnaB-like helicase N terminal domain CEJ55_21345 PF03796 DnaB-like helicase C terminal domain CEJ55_21355 PF05269 Bacteriophage CII protein CEJ55_21360 PF09048 Cro CEJ55_21365 PF00717 Peptidase S24-like CEJ55_21365 PF01381 Helix-turn-helix CEJ55_21400 PF02061 CEJ55_21400 CEJ55_21405 PF06301 CEJ55_21405 CEJ55_21410 PF04404 CEJ55_21410 CEJ55_21420 PF11043 CEJ55_21420 CEJ55_21425 PF10930 CEJ55_21425 CEJ55_21435 PF13935 CEJ55_21435 CEJ55_21440 PF13935 CEJ55_21440 CEJ55_21475 PF00589 Phage integrase family CEJ55_21475 PF13356 Domain of unknown function (DUF4102) CEJ55_21495 PF04606 CEJ55_21495 CEJ55_21500 PF06048 CEJ55_21500 CEJ55_21500 PF08273 Zinc-binding domain of primase-helicase CEJ55_21500 PF13362 Toprim domain CEJ55_21515 PF10554 CEJ55_21515 CEJ55_21520 PF05125 CEJ55_21520 CEJ55_21530 PF05930 Prophage CP4-57 regulatory protein (AlpA) CEJ55_21540 PF01306 LacY proton/sugar symporter CEJ55_21545 PF00294 pfkB family carbohydrate kinase CEJ55_21550 PF00251 Glycosyl hydrolases family 32 N-terminal domain CEJ55_21550 PF08244 Glycosyl hydrolases family 32 C terminal CEJ55_21555 PF00356 Bacterial regulatory proteins, lacI family CEJ55_21555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ55_21560 PF02447 CEJ55_21560 CEJ55_21565 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_21570 PF07690 Major Facilitator Superfamily CEJ55_21575 PF00529 HlyD family secretion protein CEJ55_21575 PF16576 CEJ55_21575 CEJ55_21580 PF00072 Response regulator receiver domain CEJ55_21580 PF00196 Bacterial regulatory proteins, luxR family CEJ55_21585 PF00072 Response regulator receiver domain CEJ55_21585 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_21585 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_21585 PF01627 Hpt domain CEJ55_21585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_21590 PF02515 CoA-transferase family III CEJ55_21595 PF03547 CEJ55_21595 CEJ55_21600 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ55_21600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ55_21600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ55_21605 PF02515 CoA-transferase family III CEJ55_21610 PF10938 YfdX protein CEJ55_21620 PF10810 CEJ55_21620 CEJ55_21625 PF03279 CEJ55_21625 CEJ55_21635 PF00155 Aminotransferase class I and II CEJ55_21640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_21640 PF06580 CEJ55_21640 CEJ55_21640 PF07694 5TMR of 5TMR-LYT CEJ55_21645 PF00072 Response regulator receiver domain CEJ55_21645 PF04397 LytTr DNA-binding domain CEJ55_21650 PF12833 Helix-turn-helix domain CEJ55_21655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_21655 PF00381 PTS HPr component phosphorylation site CEJ55_21655 PF00391 PEP-utilising enzyme, mobile domain CEJ55_21655 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ55_21655 PF05524 PEP-utilising enzyme, N-terminal CEJ55_21660 PF05343 M42 glutamyl aminopeptidase CEJ55_21665 PF00557 Metallopeptidase family M24 CEJ55_21665 PF01321 Creatinase/Prolidase N-terminal domain CEJ55_21670 PF02378 Phosphotransferase system, EIIC CEJ55_21675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_21680 PF02685 Glucokinase CEJ55_21685 PF00654 Voltage gated chloride channel CEJ55_21690 PF10697 CEJ55_21690 CEJ55_21695 PF01566 CEJ55_21695 CEJ55_21700 PF01773 Na+ dependent nucleoside transporter N-terminus CEJ55_21700 PF07662 Na+ dependent nucleoside transporter C-terminus CEJ55_21700 PF07670 Nucleoside recognition CEJ55_21705 PF00563 EAL domain CEJ55_21705 PF05231 CEJ55_21705 CEJ55_21720 PF07037 CEJ55_21720 CEJ55_21725 PF07037 CEJ55_21725 CEJ55_21730 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEJ55_21755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_21755 PF03466 LysR substrate binding domain CEJ55_21765 PF03825 CEJ55_21765 CEJ55_21770 PF01048 Phosphorylase superfamily CEJ55_21775 PF03502 Nucleoside-specific channel-forming protein, Tsx CEJ55_21780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_21780 PF03466 LysR substrate binding domain CEJ55_21785 PF13593 SBF-like CPA transporter family (DUF4137) CEJ55_21790 PF12843 CEJ55_21790 CEJ55_21795 PF00533 BRCA1 C Terminus (BRCT) domain CEJ55_21795 PF01653 NAD-dependent DNA ligase adenylation domain CEJ55_21795 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CEJ55_21795 PF03120 NAD-dependent DNA ligase OB-fold domain CEJ55_21795 PF12826 Helix-hairpin-helix motif CEJ55_21795 PF14520 Helix-hairpin-helix domain CEJ55_21800 PF04354 ZipA, C-terminal FtsZ-binding domain CEJ55_21805 PF07264 Etoposide-induced protein 2 CEJ55_21810 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_21815 PF00381 PTS HPr component phosphorylation site CEJ55_21820 PF00391 PEP-utilising enzyme, mobile domain CEJ55_21820 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ55_21820 PF05524 PEP-utilising enzyme, N-terminal CEJ55_21825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEJ55_21830 PF08543 Phosphomethylpyrimidine kinase CEJ55_21835 PF17263 CEJ55_21835 CEJ55_21840 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_21845 PF00005 ABC transporter CEJ55_21845 PF12857 CEJ55_21845 CEJ55_21850 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_21855 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_21860 PF13531 Bacterial extracellular solute-binding protein CEJ55_21865 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_21870 PF01380 SIS domain CEJ55_21870 PF01418 Helix-turn-helix domain, rpiR family CEJ55_21875 PF01380 SIS domain CEJ55_21880 PF00367 phosphotransferase system, EIIB CEJ55_21880 PF02378 Phosphotransferase system, EIIC CEJ55_21885 PF00144 Beta-lactamase CEJ55_21890 PF04261 Dyp-type peroxidase family CEJ55_21895 PF06572 Protein of unknown function (DUF1131) CEJ55_21900 PF11143 CEJ55_21900 CEJ55_21905 PF00583 Acetyltransferase (GNAT) family CEJ55_21910 PF01520 N-acetylmuramoyl-L-alanine amidase CEJ55_21915 PF01218 Coproporphyrinogen III oxidase CEJ55_21920 PF12833 Helix-turn-helix domain CEJ55_21925 PF00936 BMC domain CEJ55_21925 PF16365 CEJ55_21925 CEJ55_21930 PF00936 BMC domain CEJ55_21935 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CEJ55_21940 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CEJ55_21945 PF06277 Ethanolamine utilisation protein EutA CEJ55_21950 PF04346 CEJ55_21950 CEJ55_21955 PF00465 Iron-containing alcohol dehydrogenase CEJ55_21960 PF14450 Cell division protein FtsA CEJ55_21965 PF00171 Aldehyde dehydrogenase family CEJ55_21970 PF03319 Ethanolamine utilisation protein EutN/carboxysome CEJ55_21975 PF00936 BMC domain CEJ55_21980 PF01515 Phosphate acetyl/butaryl transferase CEJ55_21985 PF01923 Cobalamin adenosyltransferase CEJ55_21990 PF06249 Ethanolamine utilisation protein EutQ CEJ55_21995 PF10662 Ethanolamine utilisation - propanediol utilisation CEJ55_22000 PF00936 BMC domain CEJ55_22005 PF00390 Malic enzyme, N-terminal domain CEJ55_22005 PF01515 Phosphate acetyl/butaryl transferase CEJ55_22005 PF03949 Malic enzyme, NAD binding domain CEJ55_22015 PF00923 Transaldolase CEJ55_22020 PF00456 Transketolase, thiamine diphosphate binding domain CEJ55_22020 PF02779 Transketolase, pyrimidine binding domain CEJ55_22020 PF02780 Transketolase, C-terminal domain CEJ55_22025 PF06674 CEJ55_22025 CEJ55_22030 PF00293 NUDIX domain CEJ55_22035 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_22035 PF13247 4Fe-4S dicluster domain CEJ55_22035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEJ55_22040 PF00672 HAMP domain CEJ55_22040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_22040 PF07730 Histidine kinase CEJ55_22040 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEJ55_22045 PF00873 AcrB/AcrD/AcrF family CEJ55_22055 PF03960 ArsC family CEJ55_22060 PF01546 Peptidase family M20/M25/M40 CEJ55_22060 PF07687 Peptidase dimerisation domain CEJ55_22065 PF13980 CEJ55_22065 CEJ55_22070 PF02230 Phospholipase/Carboxylesterase CEJ55_22075 PF05127 Helicase CEJ55_22075 PF08351 Domain of unknown function (DUF1726) CEJ55_22075 PF13718 GNAT acetyltransferase 2 CEJ55_22075 PF17176 CEJ55_22075 CEJ55_22080 PF04228 CEJ55_22080 CEJ55_22085 PF01850 PIN domain CEJ55_22090 PF04014 Antidote-toxin recognition MazE CEJ55_22095 PF01259 SAICAR synthetase CEJ55_22100 PF06804 NlpB/DapX lipoprotein CEJ55_22105 PF00701 Dihydrodipicolinate synthetase family CEJ55_22110 PF01842 ACT domain CEJ55_22110 PF13740 ACT domain CEJ55_22115 PF00578 AhpC/TSA family CEJ55_22120 PF00037 4Fe-4S binding domain CEJ55_22120 PF12798 4Fe-4S binding domain CEJ55_22125 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CEJ55_22130 PF00146 NADH dehydrogenase CEJ55_22140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEJ55_22145 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CEJ55_22145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEJ55_22150 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CEJ55_22150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CEJ55_22150 PF00374 Nickel-dependent hydrogenase CEJ55_22155 PF12838 4Fe-4S dicluster domain CEJ55_22160 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEJ55_22165 PF07450 CEJ55_22165 CEJ55_22170 PF00158 Sigma-54 interaction domain CEJ55_22170 PF01590 GAF domain CEJ55_22170 PF02954 Bacterial regulatory protein, Fis family CEJ55_22175 PF01226 Formate/nitrite transporter CEJ55_22180 PF01226 Formate/nitrite transporter CEJ55_22190 PF01594 CEJ55_22190 CEJ55_22195 PF01435 Peptidase family M48 CEJ55_22195 PF14559 Tetratricopeptide repeat CEJ55_22200 PF03960 ArsC family CEJ55_22205 PF00308 Bacterial dnaA protein CEJ55_22210 PF00860 Permease family CEJ55_22215 PF14681 Uracil phosphoribosyltransferase CEJ55_22225 PF00586 AIR synthase related protein, N-terminal domain CEJ55_22225 PF02769 AIR synthase related protein, C-terminal domain CEJ55_22230 PF00551 Formyl transferase CEJ55_22235 PF02503 Polyphosphate kinase middle domain CEJ55_22235 PF13089 Polyphosphate kinase N-terminal domain CEJ55_22235 PF13090 Polyphosphate kinase C-terminal domain CEJ55_22240 PF02541 Ppx/GppA phosphatase family CEJ55_22245 PF00563 EAL domain CEJ55_22245 PF05231 CEJ55_22245 CEJ55_22255 PF11119 CEJ55_22255 CEJ55_22265 PF05433 CEJ55_22265 CEJ55_22270 PF17358 CEJ55_22270 CEJ55_22275 PF00117 Glutamine amidotransferase class-I CEJ55_22275 PF00958 GMP synthase C terminal domain CEJ55_22275 PF02540 NAD synthase CEJ55_22280 PF00478 IMP dehydrogenase / GMP reductase domain CEJ55_22280 PF00571 CBS domain CEJ55_22285 PF02601 CEJ55_22285 CEJ55_22285 PF13742 CEJ55_22285 CEJ55_22290 PF07191 zinc-ribbons CEJ55_22295 PF01926 50S ribosome-binding GTPase CEJ55_22295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEJ55_22300 PF13360 PQQ-like domain CEJ55_22305 PF09976 Tetratricopeptide repeat CEJ55_22310 PF03129 Anticodon binding domain CEJ55_22310 PF13393 Histidyl-tRNA synthetase CEJ55_22315 PF04551 GcpE protein CEJ55_22320 PF13413 Helix-turn-helix domain CEJ55_22320 PF13464 CEJ55_22320 CEJ55_22325 PF04055 Radical SAM superfamily CEJ55_22330 PF00334 Nucleoside diphosphate kinase CEJ55_22335 PF00905 Penicillin binding protein transpeptidase domain CEJ55_22335 PF00912 Transglycosylase CEJ55_22335 PF06832 CEJ55_22335 CEJ55_22340 PF00207 Alpha-2-macroglobulin family CEJ55_22340 PF01835 MG2 domain CEJ55_22340 PF07703 Alpha-2-macroglobulin family N-terminal region CEJ55_22340 PF11974 Alpha-2-macroglobulin MG1 domain CEJ55_22345 PF00581 Rhodanese-like domain CEJ55_22350 PF07179 CEJ55_22350 CEJ55_22350 PF14581 CEJ55_22350 CEJ55_22355 PF00883 Cytosol aminopeptidase family, catalytic domain CEJ55_22355 PF12404 CEJ55_22355 CEJ55_22360 PF04384 Iron-sulphur cluster assembly CEJ55_22365 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_22370 PF00012 Hsp70 protein CEJ55_22375 PF07743 HSCB C-terminal oligomerisation domain CEJ55_22380 PF01521 Iron-sulphur cluster biosynthesis CEJ55_22385 PF01592 NifU-like N terminal domain CEJ55_22390 PF00266 Aminotransferase class-V CEJ55_22395 PF02082 Transcriptional regulator CEJ55_22400 PF00588 SpoU rRNA Methylase family CEJ55_22405 PF00459 Inositol monophosphatase family CEJ55_22410 PF12146 Putative lysophospholipase CEJ55_22415 PF00874 PRD domain CEJ55_22420 PF12832 MFS_1 like family CEJ55_22425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_22425 PF03466 LysR substrate binding domain CEJ55_22430 PF00355 Rieske [2Fe-2S] domain CEJ55_22430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CEJ55_22435 PF00866 Ring hydroxylating beta subunit CEJ55_22440 PF00355 Rieske [2Fe-2S] domain CEJ55_22445 PF00106 short chain dehydrogenase CEJ55_22450 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_22450 PF14759 Reductase C-terminal CEJ55_22455 PF07681 CEJ55_22455 CEJ55_22460 PF01263 Aldose 1-epimerase CEJ55_22465 PF00107 Zinc-binding dehydrogenase CEJ55_22465 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_22470 PF02653 CEJ55_22470 CEJ55_22475 PF00005 ABC transporter CEJ55_22480 PF13407 Periplasmic binding protein domain CEJ55_22485 PF13432 Tetratricopeptide repeat CEJ55_22485 PF17128 CEJ55_22485 CEJ55_22490 PF00480 ROK family CEJ55_22495 PF00464 Serine hydroxymethyltransferase CEJ55_22500 PF00042 Globin CEJ55_22500 PF00175 Oxidoreductase NAD-binding domain CEJ55_22500 PF00970 Oxidoreductase FAD-binding domain CEJ55_22505 PF00543 Nitrogen regulatory protein P-II CEJ55_22510 PF00072 Response regulator receiver domain CEJ55_22510 PF00158 Sigma-54 interaction domain CEJ55_22515 PF13942 CEJ55_22515 CEJ55_22520 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_22520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_22525 PF02769 AIR synthase related protein, C-terminal domain CEJ55_22525 PF13507 CobB/CobQ-like glutamine amidotransferase domain CEJ55_22535 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ55_22535 PF01464 Transglycosylase SLT domain CEJ55_22540 PF14437 CEJ55_22540 CEJ55_22545 PF12710 haloacid dehalogenase-like hydrolase CEJ55_22550 PF01380 SIS domain CEJ55_22550 PF01418 Helix-turn-helix domain, rpiR family CEJ55_22575 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ55_22580 PF02413 CEJ55_22580 CEJ55_22585 PF01661 Macro domain CEJ55_22590 PF03335 Phage tail fibre repeat CEJ55_22590 PF07484 Phage Tail Collar Domain CEJ55_22595 PF11041 CEJ55_22595 CEJ55_22600 PF04865 CEJ55_22600 CEJ55_22615 PF14110 CEJ55_22615 CEJ55_22655 PF11681 CEJ55_22655 CEJ55_22660 PF11863 CEJ55_22660 CEJ55_22680 PF13262 CEJ55_22680 CEJ55_22690 PF09950 CEJ55_22690 CEJ55_22700 PF09979 CEJ55_22700 CEJ55_22705 PF04233 CEJ55_22705 CEJ55_22710 PF06381 CEJ55_22710 CEJ55_22720 PF03592 Terminase small subunit CEJ55_22730 PF00959 Phage lysozyme CEJ55_22735 PF05106 CEJ55_22735 CEJ55_22745 PF06530 CEJ55_22745 CEJ55_22750 PF05272 CEJ55_22750 CEJ55_22755 PF01381 Helix-turn-helix CEJ55_22760 PF00717 Peptidase S24-like CEJ55_22760 PF01381 Helix-turn-helix CEJ55_22770 PF10926 CEJ55_22770 CEJ55_22775 PF10991 Protein of unknown function (DUF2815) CEJ55_22790 PF00476 DNA polymerase family A CEJ55_22810 PF08774 VRR-NUC domain CEJ55_22815 PF00145 C-5 cytosine-specific DNA methylase CEJ55_22825 PF00176 SNF2 family N-terminal domain CEJ55_22835 PF00589 Phage integrase family CEJ55_22840 PF12838 4Fe-4S dicluster domain CEJ55_22860 PF01648 4'-phosphopantetheinyl transferase superfamily CEJ55_22865 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CEJ55_22870 PF02565 Recombination protein O C terminal CEJ55_22870 PF11967 Recombination protein O N terminal CEJ55_22875 PF01926 50S ribosome-binding GTPase CEJ55_22875 PF07650 KH domain CEJ55_22880 PF00035 Double-stranded RNA binding motif CEJ55_22880 PF14622 Ribonuclease-III-like CEJ55_22890 PF00717 Peptidase S24-like CEJ55_22890 PF10502 Signal peptidase, peptidase S26 CEJ55_22895 PF00009 Elongation factor Tu GTP binding domain CEJ55_22895 PF00679 Elongation factor G C-terminus CEJ55_22895 PF03144 Elongation factor Tu domain 2 CEJ55_22895 PF06421 GTP-binding protein LepA C-terminus CEJ55_22900 PF04246 CEJ55_22900 CEJ55_22905 PF03888 MucB/RseB family CEJ55_22905 PF17188 CEJ55_22905 CEJ55_22910 PF03872 Anti sigma-E protein RseA, N-terminal domain CEJ55_22910 PF03873 Anti sigma-E protein RseA, C-terminal domain CEJ55_22915 PF04542 Sigma-70 region 2 CEJ55_22915 PF08281 Sigma-70, region 4 CEJ55_22920 PF00890 FAD binding domain CEJ55_22920 PF02910 Fumarate reductase flavoprotein C-term CEJ55_22925 PF05175 Methyltransferase small domain CEJ55_22930 PF00270 DEAD/DEAH box helicase CEJ55_22930 PF00271 Helicase conserved C-terminal domain CEJ55_22940 PF01548 CEJ55_22940 CEJ55_22940 PF02371 CEJ55_22940 CEJ55_22945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_22945 PF03466 LysR substrate binding domain CEJ55_22950 PF01810 CEJ55_22950 CEJ55_22955 PF01228 Glycine radical CEJ55_22960 PF03167 Uracil DNA glycosylase superfamily CEJ55_22965 PF00588 SpoU rRNA Methylase family CEJ55_22965 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEJ55_22975 PF00085 Thioredoxin CEJ55_22980 PF03942 CEJ55_22980 CEJ55_22985 PF00583 Acetyltransferase (GNAT) family CEJ55_22985 PF13380 CoA binding domain CEJ55_22985 PF13549 ATP-grasp domain CEJ55_22985 PF13607 Succinyl-CoA ligase like flavodoxin domain CEJ55_22990 PF13091 PLD-like domain CEJ55_22995 PF10043 CEJ55_22995 CEJ55_23000 PF00083 Sugar (and other) transporter CEJ55_23030 PF00004 ATPase family associated with various cellular activities (AAA) CEJ55_23030 PF02861 Clp amino terminal domain CEJ55_23030 PF07724 AAA domain (Cdc48 subfamily) CEJ55_23030 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ55_23035 PF02578 Multi-copper polyphenol oxidoreductase laccase CEJ55_23040 PF00849 RNA pseudouridylate synthase CEJ55_23040 PF01479 S4 domain CEJ55_23045 PF13525 Outer membrane lipoprotein CEJ55_23055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEJ55_23060 PF00800 Prephenate dehydratase CEJ55_23060 PF01817 Chorismate mutase type II CEJ55_23065 PF01817 Chorismate mutase type II CEJ55_23065 PF02153 Prephenate dehydrogenase CEJ55_23070 PF00793 DAHP synthetase I family CEJ55_23075 PF10973 CEJ55_23075 CEJ55_23080 PF13689 CEJ55_23080 CEJ55_23085 PF00990 GGDEF domain CEJ55_23085 PF17152 CEJ55_23085 CEJ55_23090 PF00691 OmpA family CEJ55_23095 PF01245 Ribosomal protein L19 CEJ55_23100 PF01746 tRNA (Guanine-1)-methyltransferase CEJ55_23105 PF01782 RimM N-terminal domain CEJ55_23105 PF05239 PRC-barrel domain CEJ55_23110 PF00886 Ribosomal protein S16 CEJ55_23115 PF00448 SRP54-type protein, GTPase domain CEJ55_23115 PF02881 SRP54-type protein, helical bundle domain CEJ55_23115 PF02978 Signal peptide binding domain CEJ55_23120 PF01578 CEJ55_23120 CEJ55_23125 PF00571 CBS domain CEJ55_23125 PF01595 CEJ55_23125 CEJ55_23125 PF03471 Transporter associated domain CEJ55_23130 PF01025 GrpE CEJ55_23140 PF01513 ATP-NAD kinase CEJ55_23145 PF02463 RecF/RecN/SMC N terminal domain CEJ55_23150 PF04355 SmpA / OmlA family CEJ55_23155 PF03658 RnfH family Ubiquitin CEJ55_23160 PF03364 Polyketide cyclase / dehydrase and lipid transport CEJ55_23165 PF01668 SmpB protein CEJ55_23190 PF00239 Resolvase, N terminal domain CEJ55_23200 PF17621 CEJ55_23200 CEJ55_23205 PF17612 CEJ55_23205 CEJ55_23220 PF02806 Alpha amylase, C-terminal all-beta domain CEJ55_23225 PF08943 CsiD CEJ55_23230 PF01266 FAD dependent oxidoreductase CEJ55_23235 PF00171 Aldehyde dehydrogenase family CEJ55_23240 PF00202 Aminotransferase class-III CEJ55_23245 PF00324 Amino acid permease CEJ55_23250 PF00392 Bacterial regulatory proteins, gntR family CEJ55_23250 PF07729 FCD domain CEJ55_23255 PF01476 LysM domain CEJ55_23255 PF04972 BON domain CEJ55_23260 PF01679 CEJ55_23260 CEJ55_23265 PF01022 Bacterial regulatory protein, arsR family CEJ55_23270 PF00581 Rhodanese-like domain CEJ55_23270 PF11127 Protein of unknown function (DUF2892) CEJ55_23275 PF00816 H-NS histone family CEJ55_23280 PF06610 CEJ55_23280 CEJ55_23285 PF09400 Protein of unknown function (DUF2002) CEJ55_23290 PF05957 CEJ55_23290 CEJ55_23295 PF00462 Glutaredoxin CEJ55_23300 PF07972 NrdI Flavodoxin like CEJ55_23305 PF00317 Ribonucleotide reductase, all-alpha domain CEJ55_23305 PF02867 Ribonucleotide reductase, barrel domain CEJ55_23305 PF08343 Ribonucleotide reductase N-terminal CEJ55_23310 PF00268 Ribonucleotide reductase, small chain CEJ55_23315 PF00005 ABC transporter CEJ55_23315 PF00571 CBS domain CEJ55_23320 PF00528 Binding-protein-dependent transport system inner membrane component CEJ55_23325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEJ55_23330 PF07690 Major Facilitator Superfamily CEJ55_23335 PF03591 CEJ55_23335 CEJ55_23340 PF05437 CEJ55_23340 CEJ55_23345 PF01047 MarR family CEJ55_23350 PF00529 HlyD family secretion protein CEJ55_23350 PF16576 CEJ55_23350 CEJ55_23355 PF07690 Major Facilitator Superfamily CEJ55_23360 PF02664 S-Ribosylhomocysteinase (LuxS) CEJ55_23365 PF04262 Glutamate-cysteine ligase CEJ55_23370 PF09335 CEJ55_23370 CEJ55_23375 PF13419 Haloacid dehalogenase-like hydrolase CEJ55_23400 PF02599 Global regulator protein family CEJ55_23405 PF01411 tRNA synthetases class II (A) CEJ55_23405 PF02272 DHHA1 domain CEJ55_23405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEJ55_23410 PF02631 RecX family CEJ55_23415 PF00154 recA bacterial DNA recombination protein CEJ55_23420 PF02464 Competence-damaged protein CEJ55_23425 PF13406 Transglycosylase SLT domain CEJ55_23430 PF03608 CEJ55_23430 CEJ55_23435 PF03612 CEJ55_23435 CEJ55_23435 PF07663 CEJ55_23435 CEJ55_23440 PF03829 PTS system glucitol/sorbitol-specific IIA component CEJ55_23445 PF00106 short chain dehydrogenase CEJ55_23450 PF06923 CEJ55_23450 CEJ55_23455 PF00455 CEJ55_23455 CEJ55_23455 PF08220 DeoR-like helix-turn-helix domain CEJ55_23460 PF00571 CBS domain CEJ55_23460 PF01380 SIS domain CEJ55_23465 PF00158 Sigma-54 interaction domain CEJ55_23465 PF01590 GAF domain CEJ55_23470 PF00258 Flavodoxin CEJ55_23470 PF00301 Rubredoxin CEJ55_23470 PF00753 Metallo-beta-lactamase superfamily CEJ55_23475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_23480 PF00708 Acylphosphatase CEJ55_23480 PF01300 Telomere recombination CEJ55_23480 PF07503 HypF finger CEJ55_23485 PF12798 4Fe-4S binding domain CEJ55_23485 PF12800 4Fe-4S binding domain CEJ55_23485 PF13247 4Fe-4S dicluster domain CEJ55_23490 PF00356 Bacterial regulatory proteins, lacI family CEJ55_23490 PF13377 Periplasmic binding protein-like domain CEJ55_23495 PF00367 phosphotransferase system, EIIB CEJ55_23495 PF02378 Phosphotransferase system, EIIC CEJ55_23500 PF00232 Glycosyl hydrolase family 1 CEJ55_23505 PF01750 Hydrogenase maturation protease CEJ55_23510 PF07450 CEJ55_23510 CEJ55_23515 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEJ55_23520 PF12838 4Fe-4S dicluster domain CEJ55_23525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CEJ55_23525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CEJ55_23525 PF00374 Nickel-dependent hydrogenase CEJ55_23530 PF00146 NADH dehydrogenase CEJ55_23535 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CEJ55_23540 PF13247 4Fe-4S dicluster domain CEJ55_23550 PF11046 CEJ55_23550 CEJ55_23555 PF01155 Hydrogenase expression/synthesis hypA family CEJ55_23560 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEJ55_23565 PF01455 HupF/HypC family CEJ55_23570 PF01924 Hydrogenase formation hypA family CEJ55_23575 PF00586 AIR synthase related protein, N-terminal domain CEJ55_23575 PF02769 AIR synthase related protein, C-terminal domain CEJ55_23580 PF00158 Sigma-54 interaction domain CEJ55_23580 PF01590 GAF domain CEJ55_23580 PF02954 Bacterial regulatory protein, Fis family CEJ55_23585 PF11756 CEJ55_23585 CEJ55_23595 PF00488 MutS domain V CEJ55_23595 PF01624 MutS domain I CEJ55_23595 PF05188 MutS domain II CEJ55_23595 PF05190 MutS family domain IV CEJ55_23595 PF05192 MutS domain III CEJ55_23600 PF00149 Calcineurin-like phosphoesterase CEJ55_23605 PF00455 CEJ55_23605 CEJ55_23605 PF08220 DeoR-like helix-turn-helix domain CEJ55_23615 PF07005 Protein of unknown function, DUF1537 CEJ55_23615 PF17042 CEJ55_23615 CEJ55_23620 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ55_23625 PF01261 Xylose isomerase-like TIM barrel CEJ55_23630 PF02447 CEJ55_23630 CEJ55_23640 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CEJ55_23645 PF02441 Flavoprotein CEJ55_23650 PF01047 MarR family CEJ55_23655 PF00140 Sigma-70 factor, region 1 CEJ55_23655 PF04539 Sigma-70 region 3 CEJ55_23655 PF04542 Sigma-70 region 2 CEJ55_23655 PF04545 Sigma-70, region 4 CEJ55_23660 PF01476 LysM domain CEJ55_23660 PF01551 Peptidase family M23 CEJ55_23665 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CEJ55_23670 PF01975 Survival protein SurE CEJ55_23675 PF01142 tRNA pseudouridine synthase D (TruD) CEJ55_23680 PF02542 YgbB family CEJ55_23685 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CEJ55_23690 PF04977 Septum formation initiator CEJ55_23695 PF12084 CEJ55_23695 CEJ55_23700 PF01583 Adenylylsulphate kinase CEJ55_23705 PF00009 Elongation factor Tu GTP binding domain CEJ55_23710 PF01507 Phosphoadenosine phosphosulfate reductase family CEJ55_23715 PF04389 Peptidase family M28 CEJ55_23720 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CEJ55_23725 PF01867 CRISPR associated protein Cas1 CEJ55_23730 PF08798 CRISPR associated protein CEJ55_23735 PF09704 CRISPR-associated protein (Cas_Cas5) CEJ55_23740 PF09344 CT1975-like protein CEJ55_23745 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) CEJ55_23750 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CEJ55_23760 PF01848 CEJ55_23760 CEJ55_23765 PF01507 Phosphoadenosine phosphosulfate reductase family CEJ55_23770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEJ55_23770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEJ55_23775 PF00175 Oxidoreductase NAD-binding domain CEJ55_23775 PF00258 Flavodoxin CEJ55_23775 PF00667 FAD binding domain CEJ55_23780 PF01242 6-pyruvoyl tetrahydropterin synthase CEJ55_23785 PF12831 FAD dependent oxidoreductase CEJ55_23795 PF04309 Glycerol-3-phosphate responsive antiterminator CEJ55_23800 PF00766 Electron transfer flavoprotein FAD-binding domain CEJ55_23800 PF01012 Electron transfer flavoprotein domain CEJ55_23805 PF01012 Electron transfer flavoprotein domain CEJ55_23810 PF00083 Sugar (and other) transporter CEJ55_23815 PF01565 FAD binding domain CEJ55_23815 PF02913 FAD linked oxidases, C-terminal domain CEJ55_23820 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_23825 PF07690 Major Facilitator Superfamily CEJ55_23830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ55_23830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_23835 PF04055 Radical SAM superfamily CEJ55_23835 PF13394 4Fe-4S single cluster domain CEJ55_23850 PF00113 Enolase, C-terminal TIM barrel domain CEJ55_23850 PF03952 Enolase, N-terminal domain CEJ55_23855 PF00117 Glutamine amidotransferase class-I CEJ55_23855 PF06418 CTP synthase N-terminus CEJ55_23860 PF03819 MazG nucleotide pyrophosphohydrolase domain CEJ55_23865 PF02452 PemK-like protein CEJ55_23870 PF04014 Antidote-toxin recognition MazE CEJ55_23875 PF02824 TGS domain CEJ55_23875 PF04607 Region found in RelA / SpoT proteins CEJ55_23875 PF13291 ACT domain CEJ55_23875 PF13328 HD domain CEJ55_23880 PF01938 TRAM domain CEJ55_23880 PF05958 tRNA (Uracil-5-)-methyltransferase CEJ55_23885 PF00072 Response regulator receiver domain CEJ55_23885 PF00512 His Kinase A (phospho-acceptor) domain CEJ55_23885 PF01627 Hpt domain CEJ55_23885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ55_23885 PF09984 CEJ55_23885 CEJ55_23890 PF13378 Enolase C-terminal domain-like CEJ55_23895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEJ55_23895 PF13378 Enolase C-terminal domain-like CEJ55_23900 PF07690 Major Facilitator Superfamily CEJ55_23905 PF00258 Flavodoxin CEJ55_23910 PF00849 RNA pseudouridylate synthase CEJ55_23915 PF04287 tRNA pseudouridine synthase C CEJ55_23920 PF07348 Syd protein (SUKH-2) CEJ55_23925 PF14489 QueF-like protein CEJ55_23925 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CEJ55_23930 PF03641 Possible lysine decarboxylase CEJ55_23930 PF11892 Domain of unknown function (DUF3412) CEJ55_23930 PF14793 Domain of unknown function (DUF4478) CEJ55_23940 PF03313 CEJ55_23940 CEJ55_23940 PF03315 Serine dehydratase beta chain CEJ55_23945 PF01367 5'-3' exonuclease, C-terminal SAM fold CEJ55_23945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEJ55_23950 PF00465 Iron-containing alcohol dehydrogenase CEJ55_23955 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ55_23960 PF07690 Major Facilitator Superfamily CEJ55_23965 PF02952 L-fucose isomerase, C-terminal domain CEJ55_23965 PF07881 L-fucose isomerase, first N-terminal domain CEJ55_23965 PF07882 L-fucose isomerase, second N-terminal domain CEJ55_23970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ55_23970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ55_23975 PF05025 RbsD / FucU transport protein family CEJ55_23980 PF00455 CEJ55_23980 CEJ55_23980 PF08220 DeoR-like helix-turn-helix domain CEJ55_23985 PF01728 FtsJ-like methyltransferase CEJ55_23990 PF04241 CEJ55_23990 CEJ55_23995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_23995 PF03466 LysR substrate binding domain CEJ55_24000 PF06004 Bacterial protein of unknown function (DUF903) CEJ55_24005 PF00266 Aminotransferase class-V CEJ55_24010 PF02657 Fe-S metabolism associated domain CEJ55_24015 PF00899 ThiF family CEJ55_24020 PF03562 MltA specific insert domain CEJ55_24020 PF06725 3D domain CEJ55_24045 PF01520 N-acetylmuramoyl-L-alanine amidase CEJ55_24045 PF11741 AMIN domain CEJ55_24050 PF00583 Acetyltransferase (GNAT) family CEJ55_24050 PF00696 Amino acid kinase family CEJ55_24055 PF13538 UvrD-like helicase C-terminal domain CEJ55_24055 PF13604 AAA domain CEJ55_24060 PF00580 UvrD/REP helicase N-terminal domain CEJ55_24060 PF12705 PD-(D/E)XK nuclease superfamily CEJ55_24060 PF13361 UvrD-like helicase C-terminal domain CEJ55_24065 PF00675 Insulinase (Peptidase family M16) CEJ55_24065 PF05193 Peptidase M16 inactive domain CEJ55_24065 PF16187 CEJ55_24065 CEJ55_24070 PF04257 Exodeoxyribonuclease V, gamma subunit CEJ55_24075 PF07963 Prokaryotic N-terminal methylation motif CEJ55_24075 PF12528 CEJ55_24075 CEJ55_24080 PF10713 CEJ55_24080 CEJ55_24085 PF07963 Prokaryotic N-terminal methylation motif CEJ55_24090 PF07963 Prokaryotic N-terminal methylation motif CEJ55_24095 PF00303 Thymidylate synthase CEJ55_24100 PF01790 CEJ55_24100 CEJ55_24105 PF00391 PEP-utilising enzyme, mobile domain CEJ55_24105 PF01590 GAF domain CEJ55_24105 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ55_24105 PF05524 PEP-utilising enzyme, N-terminal CEJ55_24110 PF00293 NUDIX domain CEJ55_24115 PF02976 DNA mismatch repair enzyme MutH CEJ55_24120 PF03741 CEJ55_24120 CEJ55_24125 PF06004 Bacterial protein of unknown function (DUF903) CEJ55_24130 PF00248 Aldo/keto reductase family CEJ55_24135 PF07690 Major Facilitator Superfamily CEJ55_24140 PF00501 AMP-binding enzyme CEJ55_24140 PF01553 Acyltransferase CEJ55_24145 PF00356 Bacterial regulatory proteins, lacI family CEJ55_24145 PF13377 Periplasmic binding protein-like domain CEJ55_24150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEJ55_24150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEJ55_24155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_24155 PF03466 LysR substrate binding domain CEJ55_24160 PF01177 Asp/Glu/Hydantoin racemase CEJ55_24165 PF00083 Sugar (and other) transporter CEJ55_24170 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_24175 PF04962 KduI/IolB family CEJ55_24180 PF00108 Thiolase, N-terminal domain CEJ55_24180 PF02803 Thiolase, C-terminal domain CEJ55_24185 PF03222 Tryptophan/tyrosine permease family CEJ55_24190 PF00196 Bacterial regulatory proteins, luxR family CEJ55_24195 PF00486 Transcriptional regulatory protein, C terminal CEJ55_24225 PF07720 Tetratricopeptide repeat CEJ55_24230 PF00486 Transcriptional regulatory protein, C terminal CEJ55_24250 PF00196 Bacterial regulatory proteins, luxR family CEJ55_24270 PF09482 CEJ55_24270 CEJ55_24275 PF01514 Secretory protein of YscJ/FliF family CEJ55_24290 PF09480 Type III secretion system protein PrgH-EprH (PrgH) CEJ55_24295 PF00196 Bacterial regulatory proteins, luxR family CEJ55_24300 PF04741 CEJ55_24300 CEJ55_24305 PF01312 FlhB HrpN YscU SpaS Family CEJ55_24310 PF01312 FlhB HrpN YscU SpaS Family CEJ55_24320 PF01311 CEJ55_24320 CEJ55_24325 PF01313 CEJ55_24325 CEJ55_24330 PF00813 CEJ55_24330 CEJ55_24335 PF01052 Surface presentation of antigens (SPOA) CEJ55_24345 PF00723 Glycosyl hydrolases family 15 CEJ55_24355 PF01476 LysM domain CEJ55_24355 PF01551 Peptidase family M23 CEJ55_24365 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEJ55_24365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEJ55_24370 PF00941 FAD binding domain in molybdopterin dehydrogenase CEJ55_24370 PF03450 CO dehydrogenase flavoprotein C-terminal domain CEJ55_24375 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ55_24375 PF01799 [2Fe-2S] binding domain CEJ55_24380 PF00158 Sigma-54 interaction domain CEJ55_24380 PF02954 Bacterial regulatory protein, Fis family CEJ55_24380 PF13188 PAS domain CEJ55_24385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEJ55_24385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEJ55_24390 PF00291 Pyridoxal-phosphate dependent enzyme CEJ55_24395 PF01546 Peptidase family M20/M25/M40 CEJ55_24395 PF07687 Peptidase dimerisation domain CEJ55_24400 PF01979 Amidohydrolase family CEJ55_24405 PF00696 Amino acid kinase family CEJ55_24410 PF02625 XdhC and CoxI family CEJ55_24410 PF13478 XdhC Rossmann domain CEJ55_24420 PF12804 MobA-like NTP transferase domain CEJ55_24425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_24425 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEJ55_24430 PF01979 Amidohydrolase family CEJ55_24435 PF00941 FAD binding domain in molybdopterin dehydrogenase CEJ55_24435 PF03450 CO dehydrogenase flavoprotein C-terminal domain CEJ55_24440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEJ55_24440 PF01799 [2Fe-2S] binding domain CEJ55_24440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEJ55_24445 PF00860 Permease family CEJ55_24450 PF01979 Amidohydrolase family CEJ55_24455 PF00860 Permease family CEJ55_24460 PF13247 4Fe-4S dicluster domain CEJ55_24465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ55_24465 PF13247 4Fe-4S dicluster domain CEJ55_24465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEJ55_24475 PF00860 Permease family CEJ55_24485 PF00293 NUDIX domain CEJ55_24490 PF00152 tRNA synthetases class II (D, K and N) CEJ55_24490 PF01336 OB-fold nucleic acid binding domain CEJ55_24500 PF01368 DHH family CEJ55_24500 PF02272 DHHA1 domain CEJ55_24505 PF10411 Disulfide bond isomerase protein N-terminus CEJ55_24505 PF13098 Thioredoxin-like domain CEJ55_24510 PF00589 Phage integrase family CEJ55_24510 PF02899 Phage integrase, N-terminal SAM-like domain CEJ55_24515 PF00258 Flavodoxin CEJ55_24520 PF07254 CEJ55_24520 CEJ55_24525 PF03937 Flavinator of succinate dehydrogenase CEJ55_24530 PF01571 Aminomethyltransferase folate-binding domain CEJ55_24540 PF01548 CEJ55_24540 CEJ55_24540 PF02371 CEJ55_24540 CEJ55_24545 PF03006 CEJ55_24545 CEJ55_24550 PF04266 ASCH domain CEJ55_24555 PF00232 Glycosyl hydrolase family 1 CEJ55_24560 PF13561 Enoyl-(Acyl carrier protein) reductase CEJ55_24565 PF02347 Glycine cleavage system P-protein CEJ55_24570 PF01597 Glycine cleavage H-protein CEJ55_24575 PF01571 Aminomethyltransferase folate-binding domain CEJ55_24575 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEJ55_24580 PF01494 FAD binding domain CEJ55_24585 PF01494 FAD binding domain CEJ55_24590 PF00557 Metallopeptidase family M24 CEJ55_24590 PF05195 Aminopeptidase P, N-terminal domain CEJ55_24595 PF03695 Uncharacterised protein family (UPF0149) CEJ55_24605 PF05164 Cell division protein ZapA CEJ55_24615 PF01812 5-formyltetrahydrofolate cyclo-ligase family CEJ55_24625 PF13956 CEJ55_24625 CEJ55_24630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ55_24630 PF01842 ACT domain CEJ55_24630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ55_24635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEJ55_24645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_24645 PF03466 LysR substrate binding domain CEJ55_24655 PF01642 Methylmalonyl-CoA mutase CEJ55_24655 PF02310 B12 binding domain CEJ55_24660 PF03308 ArgK protein CEJ55_24665 PF00378 Enoyl-CoA hydratase/isomerase family CEJ55_24670 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CEJ55_24670 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CEJ55_24675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ55_24675 PF03466 LysR substrate binding domain CEJ55_24680 PF04402 Protein of unknown function (DUF541) CEJ55_24685 PF01810 CEJ55_24685 CEJ55_24690 PF00924 Mechanosensitive ion channel CEJ55_24690 PF05552 Conserved TM helix CEJ55_24695 PF01116 Fructose-bisphosphate aldolase class-II CEJ55_24700 PF00162 Phosphoglycerate kinase CEJ55_24705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEJ55_24705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEJ55_24715 PF03479 Domain of unknown function (DUF296) CEJ55_24720 PF12822 Protein of unknown function (DUF3816) CEJ55_24725 PF02361 Cobalt transport protein CEJ55_24730 PF00005 ABC transporter CEJ55_24735 PF00005 ABC transporter CEJ55_24745 PF05068 Mannitol repressor CEJ55_24750 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CEJ55_24755 PF00107 Zinc-binding dehydrogenase CEJ55_24755 PF08240 Alcohol dehydrogenase GroES-like domain CEJ55_24760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ55_24760 PF02378 Phosphotransferase system, EIIC CEJ55_24765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ55_24770 PF00456 Transketolase, thiamine diphosphate binding domain CEJ55_24770 PF02779 Transketolase, pyrimidine binding domain CEJ55_24770 PF02780 Transketolase, C-terminal domain CEJ55_24775 PF01435 Peptidase family M48 CEJ55_24780 PF00491 Arginase family CEJ55_24790 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEJ55_24795 PF11036 CEJ55_24795 CEJ55_24800 PF17430 CEJ55_24800 CEJ55_24805 PF10885 CEJ55_24805 CEJ55_24810 PF00438 S-adenosylmethionine synthetase, N-terminal domain CEJ55_24810 PF02772 S-adenosylmethionine synthetase, central domain CEJ55_24810 PF02773 S-adenosylmethionine synthetase, C-terminal domain CEJ55_24815 PF00083 Sugar (and other) transporter CEJ55_24820 PF10263 CEJ55_24820 CEJ55_24820 PF17283 CEJ55_24820 CEJ55_24825 PF04231 Endonuclease I CEJ55_24830 PF04452 RNA methyltransferase CEJ55_24835 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CEJ55_24835 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CEJ55_24840 PF02622 Uncharacterized ACR, COG1678 CEJ55_24845 PF03652 Uncharacterised protein family (UPF0081) CEJ55_24850 PF00437 Type II/IV secretion system protein CEJ55_24855 PF01168 Alanine racemase, N-terminal domain CEJ55_24860 PF02325 CEJ55_24860 CEJ55_24865 PF02594 Uncharacterised ACR, YggU family COG1872 CEJ55_24870 PF01725 Ham1 family CEJ55_24875 PF04055 Radical SAM superfamily CEJ55_24880 PF06717 CEJ55_24880 CEJ55_24885 PF00710 Asparaginase CEJ55_24890 PF11101 CEJ55_24890 CEJ55_24895 PF04320 CEJ55_24895 CEJ55_24900 PF02390 Putative methyltransferase CEJ55_24910 PF00633 Helix-hairpin-helix motif CEJ55_24910 PF00730 HhH-GPD superfamily base excision DNA repair protein CEJ55_24910 PF10576 Iron-sulfur binding domain of endonuclease III CEJ55_24910 PF14815 NUDIX domain CEJ55_24915 PF04362 Bacterial Fe(2+) trafficking CEJ55_24920 PF01464 Transglycosylase SLT domain CEJ55_24920 PF11873 Domain of unknown function (DUF3393) CEJ55_24925 PF03825 CEJ55_24925 CEJ55_24930 PF01276 Orn/Lys/Arg decarboxylase, major domain CEJ55_24930 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEJ55_24930 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEJ55_24940 PF04474 CEJ55_24940 CEJ55_24950 PF00589 Phage integrase family CEJ55_24950 PF13356 Domain of unknown function (DUF4102) CEJ55_24955 PF00884 Sulfatase CEJ55_24955 PF08019 CEJ55_24955 CEJ55_24960 PF13505 Outer membrane protein beta-barrel domain CEJ55_24970 PF14236 CEJ55_24970 CEJ55_24990 PF00270 DEAD/DEAH box helicase CEJ55_24990 PF00271 Helicase conserved C-terminal domain CEJ55_24990 PF09369 CEJ55_24990 CEJ55_25040 PF01026 TatD related DNase CEJ55_25055 PF07693 CEJ55_25055 CEJ55_25070 PF06812 CEJ55_25070 CEJ55_25070 PF12486 CEJ55_25070 CEJ55_25085 PF08378 CEJ55_25085 CEJ55_25085 PF13245 Part of AAA domain CEJ55_25085 PF13361 UvrD-like helicase C-terminal domain CEJ55_25090 PF10544 CEJ55_25090 CEJ55_25100 PF04829 CEJ55_25100 CEJ55_25110 PF04591 Protein of unknown function, DUF596 CEJ55_25115 PF04829 CEJ55_25115