locus-tag	class	description
FX998_00015	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FX998_00020	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FX998_00035	COG2943	transferase activity, transferring hexosyl groups
FX998_00040	COG5645	(Lipo)protein
FX998_00055	COG1560	Kdo2-lipid A biosynthetic process
FX998_00065	COG2353	YceI-like domain
FX998_00070	COG3038	cytochrome b561
FX998_00105	COG2999	glutathione oxidoreductase activity
FX998_00115	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FX998_00125	COG0673	inositol 2-dehydrogenase activity
FX998_00130	COG0728	peptidoglycan biosynthetic process
FX998_00135	COG3418	PFAM FlgN family protein
FX998_00140	COG2747	anti-sigma28 factor FlgM
FX998_00145	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FX998_00150	COG1815	bacterial-type flagellum-dependent cell motility
FX998_00155	COG1558	bacterial-type flagellum-dependent cell motility
FX998_00160	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FX998_00165	COG1749	Flagellar hook protein flgE
FX998_00170	COG4787	bacterial-type flagellum-dependent cell motility
FX998_00175	COG4786	Flagellar basal body rod
FX998_00190	COG1705	Flagellar rod assembly protein muramidase FlgJ
FX998_00190	COG3951	Flagellar rod assembly protein muramidase FlgJ
FX998_00195	COG1256	bacterial-type flagellum assembly
FX998_00200	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FX998_00205	COG1530	ribonuclease E activity
FX998_00215	COG0564	pseudouridine synthase activity
FX998_00225	COG1399	metal-binding, possibly nucleic acid-binding protein
FX998_00245	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FX998_00250	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_00260	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FX998_00265	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FX998_00270	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FX998_00280	COG0470	DNA polymerase III
FX998_00285	COG0084	hydrolase, TatD family'
FX998_00290	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_00290	COG1263	PTS System
FX998_00295	COG4773	Receptor
FX998_00300	COG0537	adenosine 5'-monophosphoramidase activity
FX998_00305	COG5633	Lipoprotein
FX998_00310	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FX998_00330	COG1252	NADH dehydrogenase
FX998_00335	COG3134	Outer membrane lipoprotein
FX998_00340	COG1309	transcriptional regulator
FX998_00350	COG1376	ErfK ybiS ycfS ynhG family protein
FX998_00350	COG1388	LysM domain
FX998_00355	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FX998_00360	COG4763	Acyl-transferase
FX998_00365	COG4591	ABC-type transport system involved in lipoprotein release permease component
FX998_00370	COG1136	(ABC) transporter
FX998_00375	COG4591	ABC-type transport system involved in lipoprotein release permease component
FX998_00385	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FX998_00390	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FX998_00400	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FX998_00405	COG1177	transmembrane transport
FX998_00410	COG0582	viral genome integration into host DNA
FX998_00420	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FX998_00490	COG4584	PFAM Integrase catalytic
FX998_00520	COG1403	HNH endonuclease
FX998_00525	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
FX998_00530	COG0484	heat shock protein binding
FX998_00570	COG3772	lysozyme
FX998_00705	COG3344	reverse transcriptase
FX998_00735	COG0500	methyltransferase
FX998_00745	COG1176	ABC-type spermidine putrescine transport system, permease component I
FX998_00750	COG3842	ATPase activity
FX998_00760	COG2850	peptidyl-arginine hydroxylation
FX998_00765	COG2205	protein histidine kinase activity
FX998_00770	COG0745	RESPONSE REGULATOR receiver
FX998_00775	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FX998_00795	COG1187	pseudouridine synthase activity
FX998_00800	COG0538	isocitrate dehydrogenase activity
FX998_00815	COG5562	phage envelope protein
FX998_00820	COG0789	Transcriptional regulator
FX998_00825	COG2200	EAL domain
FX998_00850	COG2200	EAL domain
FX998_00905	COG2894	cell division
FX998_00930	COG0179	Fumarylacetoacetate (FAA) hydrolase
FX998_00945	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FX998_00950	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FX998_00955	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FX998_00970	COG2719	SpoVR family
FX998_00980	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FX998_00990	COG1619	proteins homologs of microcin C7 resistance protein MccF
FX998_01000	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FX998_01005	COG2261	transglycosylase associated protein
FX998_01020	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FX998_01020	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FX998_01020	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_01025	COG1461	Dihydroxyacetone kinase
FX998_01030	COG2376	Dihydroxyacetone kinase
FX998_01035	COG3284	Transcriptional regulator
FX998_01040	COG3468	outer membrane autotransporter barrel domain protein
FX998_01045	COG0012	GTP binding
FX998_01060	COG0659	secondary active sulfate transmembrane transporter activity
FX998_01065	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FX998_01070	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FX998_01080	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FX998_01090	COG2890	protein-(glutamine-N5) methyltransferase activity
FX998_01095	COG3094	Invasion gene expression up-regulator, SirB
FX998_01100	COG2912	Transglutaminase-like superfamily
FX998_01140	COG0387	Pfam Sodium calcium exchanger
FX998_01145	COG4572	Cation transport regulator
FX998_01150	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FX998_01155	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FX998_01160	COG4932	domain protein
FX998_01165	COG2197	response regulator
FX998_01170	COG3850	Histidine kinase
FX998_01175	COG2223	nitrite transmembrane transporter activity
FX998_01180	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FX998_01185	COG1140	nitrate reductase beta subunit
FX998_01190	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FX998_01195	COG2181	nitrate reductase activity
FX998_01230	COG0788	formyltetrahydrofolate deformylase activity
FX998_01240	COG1752	Esterase of the alpha-beta hydrolase superfamily
FX998_01245	COG0745	RESPONSE REGULATOR receiver
FX998_01250	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FX998_01255	COG2916	Histone family protein nucleoid-structuring protein H-NS
FX998_01260	COG1435	thymidine kinase activity
FX998_01270	COG1012	belongs to the aldehyde dehydrogenase family
FX998_01270	COG1454	alcohol dehydrogenase
FX998_01275	COG2095	MarC family integral membrane protein
FX998_01280	COG4166	transmembrane transport
FX998_01285	COG0601	transmembrane transport
FX998_01290	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FX998_01295	COG0444	Belongs to the ABC transporter superfamily
FX998_01300	COG4608	Belongs to the ABC transporter superfamily
FX998_01320	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FX998_01325	COG2350	Protein conserved in bacteria
FX998_01330	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FX998_01335	COG1607	acyl-coa hydrolase
FX998_01355	COG3047	cAMP biosynthetic process
FX998_01360	COG3685	Protein conserved in bacteria
FX998_01365	COG3685	Protein conserved in bacteria
FX998_01370	COG3729	General stress protein
FX998_01385	COG0134	indole-3-glycerol-phosphate synthase activity
FX998_01385	COG0135	phosphoribosylanthranilate isomerase activity
FX998_01390	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FX998_01390	COG0512	Glutamine amidotransferase of anthranilate synthase
FX998_01395	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FX998_01405	COG0613	PHP domain protein
FX998_01410	COG0009	L-threonylcarbamoyladenylate synthase
FX998_01415	COG4907	membrane protein (DUF2207)
FX998_01420	COG1187	pseudouridine synthase activity
FX998_01425	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FX998_01430	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_01435	COG0616	signal peptide processing
FX998_01445	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FX998_01450	COG0583	DNA-binding transcription factor activity
FX998_01475	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FX998_01485	COG0671	phosphoesterase, PA-phosphatase related
FX998_01490	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FX998_01495	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FX998_01505	COG0023	Translation Initiation Factor
FX998_01515	COG1349	DNA-binding transcription factor activity
FX998_01525	COG5001	Diguanylate cyclase
FX998_01540	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FX998_01540	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FX998_01545	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FX998_01550	COG2852	Protein conserved in bacteria
FX998_01555	COG4172	Belongs to the ABC transporter superfamily
FX998_01560	COG4172	Belongs to the ABC transporter superfamily
FX998_01565	COG4171	peptide transport system, permease
FX998_01570	COG4168	peptide transport system, permease
FX998_01575	COG4166	transmembrane transport
FX998_01585	COG0531	amino acid
FX998_01595	COG0174	glutamine synthetase
FX998_01600	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FX998_01605	COG1917	Cupin 2, conserved barrel domain protein
FX998_01605	COG1396	sequence-specific DNA binding
FX998_01610	COG1012	belongs to the aldehyde dehydrogenase family
FX998_01615	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FX998_01620	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FX998_01625	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FX998_01630	COG1842	Phage shock protein A
FX998_01640	COG1983	PspC domain protein
FX998_01650	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FX998_01655	COG0366	Alpha amylase catalytic
FX998_01665	COG1175	transmembrane transport
FX998_01670	COG0395	ABC-type sugar transport system, permease component
FX998_01675	COG1063	alcohol dehydrogenase
FX998_01680	COG1082	Xylose isomerase domain protein TIM barrel
FX998_01685	COG0673	inositol 2-dehydrogenase activity
FX998_01690	COG1554	hydrolase, family 65, central catalytic
FX998_01695	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FX998_01700	COG3842	ATPase activity
FX998_01710	COG1609	Transcriptional regulator
FX998_01715	COG3106	COG3106 Predicted ATPase
FX998_01725	COG3283	Transcriptional regulator of aromatic amino acids metabolism
FX998_01730	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FX998_01735	COG4948	Mandelate Racemase Muconate Lactonizing
FX998_01740	COG2866	Carboxypeptidase
FX998_01755	COG1073	alpha beta
FX998_01760	COG0583	DNA-binding transcription factor activity
FX998_01765	COG4166	transmembrane transport
FX998_01770	COG0668	transmembrane transport
FX998_01775	COG3182	Iron-regulated membrane protein
FX998_01780	COG0589	response to stress
FX998_01785	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FX998_01790	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FX998_01795	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FX998_01800	COG1473	amidohydrolase
FX998_01805	COG1473	amidohydrolase
FX998_01810	COG0583	DNA-binding transcription factor activity
FX998_01815	COG2840	Smr protein MutS2
FX998_01820	COG3706	GGDEF domain
FX998_01830	COG0513	Belongs to the DEAD box helicase family
FX998_01840	COG0589	response to stress
FX998_01845	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FX998_01850	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FX998_01850	COG0674	pyruvate-flavodoxin oxidoreductase activity
FX998_01850	COG1013	pyruvate-flavodoxin oxidoreductase activity
FX998_01850	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FX998_01855	COG3042	response to heat
FX998_01860	COG3187	Heat shock protein
FX998_01865	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FX998_01870	COG2911	Protein conserved in bacteria
FX998_01880	COG3784	Protein of unknown function (DUF1318)
FX998_01885	COG2207	Transcriptional regulator
FX998_01890	COG1012	belongs to the aldehyde dehydrogenase family
FX998_01895	COG3733	amine oxidase
FX998_01900	COG1012	belongs to the aldehyde dehydrogenase family
FX998_01900	COG2030	dehydratase
FX998_01905	COG3396	Phenylacetate-CoA oxygenase
FX998_01910	COG3460	Phenylacetate-CoA oxygenase
FX998_01915	COG3396	Phenylacetate-CoA oxygenase
FX998_01920	COG2151	metal-sulfur cluster biosynthetic enzyme
FX998_01925	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FX998_01930	COG1024	Enoyl-CoA hydratase
FX998_01935	COG1024	Enoyl-CoA hydratase
FX998_01940	COG1250	3-hydroxyacyl-CoA dehydrogenase
FX998_01945	COG2050	protein possibly involved in aromatic compounds catabolism
FX998_01950	COG0183	Belongs to the thiolase family
FX998_01955	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
FX998_01960	COG3327	negative regulation of DNA-templated transcription, initiation
FX998_01965	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FX998_01990	COG0667	Aldo Keto reductase
FX998_02000	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FX998_02005	COG4589	Belongs to the CDS family
FX998_02010	COG2267	carboxylic ester hydrolase activity
FX998_02015	COG0671	phosphoesterase, PA-phosphatase related
FX998_02015	COG2453	phosphatase
FX998_02025	COG1643	Atp-dependent helicase
FX998_02030	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FX998_02035	COG1012	belongs to the aldehyde dehydrogenase family
FX998_02045	COG3038	cytochrome b561
FX998_02060	COG0840	transmembrane signaling receptor activity
FX998_02065	COG0583	DNA-binding transcription factor activity
FX998_02070	COG5383	Protein conserved in bacteria
FX998_02080	COG2841	Protein conserved in bacteria
FX998_02085	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FX998_02090	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FX998_02095	COG1275	C4-dicarboxylate transporter malic acid transport protein
FX998_02100	COG0500	methyltransferase
FX998_02115	COG0675	Transposase, IS605 OrfB family
FX998_02120	COG3135	benzoate transporter
FX998_02125	COG1396	sequence-specific DNA binding
FX998_02130	COG0826	peptidase U32
FX998_02140	COG1724	mRNA binding
FX998_02145	COG1598	PFAM Uncharacterised protein family UPF0150
FX998_02150	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FX998_02155	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FX998_02160	COG3842	ATPase activity
FX998_02165	COG1176	ABC-type spermidine putrescine transport system, permease component I
FX998_02170	COG1177	transmembrane transport
FX998_02195	COG3238	Protein conserved in bacteria
FX998_02200	COG1247	-acetyltransferase
FX998_02205	COG2130	NADP-dependent
FX998_02210	COG1802	Transcriptional regulator
FX998_02215	COG4772	TonB-dependent receptor
FX998_02220	COG3391	amine dehydrogenase activity
FX998_02225	COG1113	amino acid transport
FX998_02230	COG0625	glutathione transferase activity
FX998_02240	COG3501	Rhs element vgr protein
FX998_02245	COG3209	COG3209 Rhs family protein
FX998_02265	COG5433	transposase activity
FX998_02275	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FX998_02280	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FX998_02285	COG0384	phenazine biosynthesis protein PhzF
FX998_02290	COG2181	nitrate reductase activity
FX998_02295	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FX998_02300	COG1140	nitrate reductase beta subunit
FX998_02310	COG2223	nitrite transmembrane transporter activity
FX998_02315	COG4886	Leucine-rich repeat (LRR) protein
FX998_02325	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FX998_02330	COG0697	spore germination
FX998_02340	COG0437	4 iron, 4 sulfur cluster binding
FX998_02345	COG2864	formate dehydrogenase
FX998_02350	COG3093	addiction module antidote protein HigA
FX998_02355	COG1064	alcohol dehydrogenase
FX998_02375	COG1764	response to oxidative stress
FX998_02380	COG4608	Belongs to the ABC transporter superfamily
FX998_02385	COG0444	Belongs to the ABC transporter superfamily
FX998_02390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FX998_02395	COG0601	transmembrane transport
FX998_02400	COG0747	negative chemotaxis
FX998_02405	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
FX998_02410	COG2199	diguanylate cyclase activity
FX998_02410	COG2200	EAL domain
FX998_02410	COG2202	Pas domain
FX998_02415	COG3706	GGDEF domain
FX998_02425	COG0531	amino acid
FX998_02430	COG0076	glutamate decarboxylase activity
FX998_02435	COG0612	Peptidase, M16
FX998_02440	COG4771	TonB-dependent receptor
FX998_02445	COG4178	(ABC) transporter
FX998_02455	COG0641	radical SAM
FX998_02460	COG3119	arylsulfatase activity
FX998_02465	COG2207	Transcriptional regulator
FX998_02475	COG0243	molybdopterin cofactor binding
FX998_02480	COG3539	Fimbrial protein
FX998_02485	COG3539	Fimbrial protein
FX998_02490	COG3539	Fimbrial protein
FX998_02505	COG3550	peptidyl-serine autophosphorylation
FX998_02510	COG1396	sequence-specific DNA binding
FX998_02560	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FX998_02570	COG3781	membrane
FX998_02575	COG0246	Mannitol dehydrogenase
FX998_02580	COG2199	diguanylate cyclase activity
FX998_02590	COG2066	Belongs to the glutaminase family
FX998_02595	COG1012	belongs to the aldehyde dehydrogenase family
FX998_02600	COG0583	DNA-binding transcription factor activity
FX998_02620	COG1846	Transcriptional regulator
FX998_02625	COG4977	sequence-specific DNA binding
FX998_02635	COG0697	spore germination
FX998_02640	COG2814	Major facilitator Superfamily
FX998_02650	COG3706	GGDEF domain
FX998_02655	COG3111	PFAM Bacterial OB fold (BOF) protein
FX998_02660	COG1546	Belongs to the CinA family
FX998_02665	COG0339	signal peptide processing
FX998_02670	COG4221	oxidoreductase activity
FX998_02675	COG1802	Transcriptional regulator
FX998_02685	COG0246	Mannitol dehydrogenase
FX998_02690	COG0477	Major facilitator Superfamily
FX998_02695	COG1063	alcohol dehydrogenase
FX998_02700	COG4948	Mandelate Racemase Muconate Lactonizing
FX998_02715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FX998_02730	COG0243	molybdopterin cofactor binding
FX998_02735	COG0243	molybdopterin cofactor binding
FX998_02740	COG0437	4 iron, 4 sulfur cluster binding
FX998_02745	COG3302	dmso reductase anchor subunit
FX998_02750	COG3381	protein complex oligomerization
FX998_02760	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FX998_02765	COG1940	carbohydrate kinase activity
FX998_02770	COG0583	DNA-binding transcription factor activity
FX998_02775	COG2814	Major facilitator Superfamily
FX998_02790	COG3591	Belongs to the peptidase S1B family
FX998_02810	COG0628	permease
FX998_02815	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FX998_02820	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FX998_02830	COG0531	amino acid
FX998_02835	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_02840	COG3136	membrane protein required for alginate biosynthesis
FX998_02845	COG0745	RESPONSE REGULATOR receiver
FX998_02850	COG2205	protein histidine kinase activity
FX998_02860	COG0114	fumarate hydratase activity
FX998_02865	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FX998_02865	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FX998_02870	COG1482	cell wall glycoprotein biosynthetic process
FX998_02875	COG5339	Protein conserved in bacteria
FX998_02890	COG3250	beta-galactosidase activity
FX998_02895	COG1309	transcriptional regulator
FX998_02900	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_02905	COG1609	Transcriptional regulator
FX998_02910	COG1263	PTS System
FX998_02910	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_02915	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FX998_02925	COG0673	inositol 2-dehydrogenase activity
FX998_02965	COG4659	FMN binding
FX998_02975	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FX998_02980	COG3104	oligopeptide transport
FX998_02985	COG0625	glutathione transferase activity
FX998_02990	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FX998_03005	COG3895	Periplasmic Protein
FX998_03015	COG3133	Outer membrane lipoprotein
FX998_03030	COG1566	PFAM secretion protein HlyD family protein
FX998_03035	COG1289	transmembrane transporter activity
FX998_03040	COG2032	superoxide dismutase activity
FX998_03045	COG4989	oxidoreductase activity
FX998_03050	COG3313	Fe-S protein
FX998_03055	COG1309	transcriptional regulator
FX998_03060	COG1902	pentaerythritol trinitrate reductase activity
FX998_03065	COG0346	lactoylglutathione lyase activity
FX998_03070	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FX998_03075	COG1201	RNA secondary structure unwinding
FX998_03080	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FX998_03085	COG0791	NLP P60 protein
FX998_03090	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FX998_03095	COG2814	Major facilitator Superfamily
FX998_03110	COG0583	DNA-binding transcription factor activity
FX998_03115	COG2814	Major facilitator Superfamily
FX998_03120	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FX998_03125	COG0307	riboflavin synthase, alpha
FX998_03135	COG3468	outer membrane autotransporter barrel domain protein
FX998_03155	COG4529	Protein conserved in bacteria
FX998_03165	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FX998_03170	COG0437	4 iron, 4 sulfur cluster binding
FX998_03180	COG2414	aldehyde ferredoxin oxidoreductase
FX998_03185	COG0437	4 iron, 4 sulfur cluster binding
FX998_03195	COG0469	pyruvate kinase activity
FX998_03200	COG4238	major outer membrane lipoprotein
FX998_03205	COG1376	ErfK ybiS ycfS ynhG family protein
FX998_03220	COG0719	Fe-S assembly protein
FX998_03225	COG0396	ATPase activity
FX998_03230	COG0719	Fe-S assembly protein
FX998_03235	COG0316	Belongs to the HesB IscA family
FX998_03245	COG2050	protein possibly involved in aromatic compounds catabolism
FX998_03250	COG0277	FAD linked oxidase domain protein
FX998_03250	COG0247	lactate metabolic process
FX998_03255	COG0628	permease
FX998_03270	COG0738	Major facilitator superfamily
FX998_03275	COG2271	Major facilitator Superfamily
FX998_03290	COG4670	ketone body catabolic process
FX998_03295	COG1960	acyl-CoA dehydrogenase activity
FX998_03300	COG1917	Cupin 2, conserved barrel domain protein
FX998_03300	COG2207	Transcriptional regulator
FX998_03305	COG2086	electron transfer activity
FX998_03310	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FX998_03315	COG0644	oxidoreductase
FX998_03320	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FX998_03325	COG0318	PFAM AMP-dependent synthetase and ligase
FX998_03330	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FX998_03330	COG0574	Belongs to the PEP-utilizing enzyme family
FX998_03340	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FX998_03345	COG4256	Hemin uptake protein
FX998_03355	COG2200	EAL domain
FX998_03360	COG0791	NLP P60 protein
FX998_03370	COG0386	Belongs to the glutathione peroxidase family
FX998_03385	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FX998_03385	COG0072	phenylalanine-tRNA ligase activity
FX998_03430	COG3137	Salt-induced outer membrane protein
FX998_03435	COG1105	Belongs to the carbohydrate kinase PfkB family
FX998_03455	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FX998_03460	COG1988	membrane-bound metal-dependent
FX998_03480	COG0753	catalase activity
FX998_03490	COG1486	melibiose metabolic process
FX998_03495	COG1917	Cupin 2, conserved barrel domain protein
FX998_03495	COG2169	Transcriptional regulator
FX998_03500	COG1447	Phosphotransferase system cellobiose-specific component IIA
FX998_03505	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FX998_03510	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FX998_03515	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FX998_03525	COG0322	excinuclease ABC activity
FX998_03535	COG3678	ATP-independent chaperone mediated protein folding
FX998_03555	COG3138	arginine N-succinyltransferase
FX998_03565	COG0708	Exodeoxyribonuclease III
FX998_03570	COG0398	Pfam SNARE associated Golgi protein
FX998_03580	COG0398	Pfam SNARE associated Golgi protein
FX998_03585	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FX998_03590	COG4134	Bacterial extracellular solute-binding protein
FX998_03595	COG4135	transport system, permease component
FX998_03600	COG4136	ATPase activity
FX998_03605	COG2897	thiosulfate sulfurtransferase activity
FX998_03610	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FX998_03615	COG0494	nUDIX hydrolase
FX998_03625	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FX998_03635	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FX998_03645	COG0778	Nitroreductase
FX998_03650	COG0616	signal peptide processing
FX998_03655	COG0252	asparaginase activity
FX998_03660	COG1335	isochorismatase
FX998_03665	COG2814	Major facilitator Superfamily
FX998_03670	COG1349	DNA-binding transcription factor activity
FX998_03675	COG0667	Aldo Keto reductase
FX998_03680	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_03685	COG0191	fructose-bisphosphate aldolase activity
FX998_03690	COG1063	alcohol dehydrogenase
FX998_03695	COG2271	Major facilitator Superfamily
FX998_03700	COG1063	alcohol dehydrogenase
FX998_03705	COG3139	Protein of unknown function (DUF1315)
FX998_03715	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FX998_03720	COG0676	glucose-6-phosphate 1-epimerase activity
FX998_03725	COG0656	L-ascorbic acid biosynthetic process
FX998_03730	COG3713	MltA-interacting MipA family protein
FX998_03735	COG2766	serine protein kinase
FX998_03745	COG2199	diguanylate cyclase activity
FX998_03750	COG2199	diguanylate cyclase activity
FX998_03755	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FX998_03770	COG2207	Transcriptional regulator
FX998_03775	COG2807	transmembrane transport
FX998_03780	COG3189	MarR family transcriptional regulator
FX998_03785	COG3042	response to heat
FX998_03790	COG2203	Gaf domain
FX998_03790	COG2199	diguanylate cyclase activity
FX998_03805	COG2261	transglycosylase associated protein
FX998_03815	COG3615	Tellurite resistance protein tehB
FX998_03825	COG0583	DNA-binding transcription factor activity
FX998_03830	COG0473	3-isopropylmalate dehydrogenase activity
FX998_03835	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FX998_03840	COG4638	Rieske (2fe-2S)
FX998_03845	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FX998_03850	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FX998_03855	COG0318	PFAM AMP-dependent synthetase and ligase
FX998_03860	COG3065	identical protein binding
FX998_03865	COG1214	PFAM Peptidase M22, glycoprotease
FX998_03870	COG1199	ATP-dependent helicase activity
FX998_03875	COG0251	oxidation-reduction process
FX998_03890	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FX998_03900	COG1760	l-serine dehydratase
FX998_03905	COG2200	EAL domain
FX998_03910	COG1253	flavin adenine dinucleotide binding
FX998_03915	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_03915	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_03920	COG3715	PTS system
FX998_03925	COG3716	PTS system mannose fructose sorbose family IID component
FX998_03940	COG2226	methyltransferase
FX998_03945	COG1278	Cold shock
FX998_03970	COG1414	Transcriptional regulator
FX998_03975	COG2814	Major facilitator Superfamily
FX998_03985	COG0793	Belongs to the peptidase S41A family
FX998_03995	COG1956	GAF domain-containing protein
FX998_04000	COG2995	paraquat-inducible protein a
FX998_04005	COG3008	intermembrane lipid transfer
FX998_04025	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FX998_04035	COG1276	copper resistance
FX998_04040	COG2372	response to copper ion
FX998_04050	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FX998_04055	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FX998_04060	COG1770	oligopeptidase
FX998_04065	COG2979	Protein of unknown function (DUF533)
FX998_04075	COG3141	response to X-ray
FX998_04085	COG0800	Aldolase
FX998_04090	COG0129	dihydroxy-acid dehydratase activity
FX998_04095	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FX998_04100	COG1737	Transcriptional regulator
FX998_04105	COG0469	pyruvate kinase activity
FX998_04110	COG1560	Kdo2-lipid A biosynthetic process
FX998_04115	COG0739	heme binding
FX998_04120	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FX998_04125	COG1121	(ABC) transporter
FX998_04130	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FX998_04160	COG0217	transcriptional regulatory protein
FX998_04165	COG0494	nUDIX hydrolase
FX998_04175	COG1335	isochorismatase
FX998_04180	COG1801	Protein of unknown function DUF72
FX998_04185	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FX998_04200	COG0243	molybdopterin cofactor binding
FX998_04205	COG3005	denitrification pathway
FX998_04215	COG3102	Protein conserved in bacteria
FX998_04225	COG3755	Protein conserved in bacteria
FX998_04235	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FX998_04240	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FX998_04245	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FX998_04250	COG0745	RESPONSE REGULATOR receiver
FX998_04255	COG2201	protein-glutamate methylesterase activity
FX998_04260	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FX998_04265	COG0840	transmembrane signaling receptor activity
FX998_04270	COG0840	transmembrane signaling receptor activity
FX998_04275	COG0835	chemotaxis
FX998_04280	COG2198	Histidine kinase
FX998_04280	COG0643	Histidine kinase
FX998_04285	COG1360	Flagellar Motor Protein
FX998_04290	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FX998_04305	COG0589	response to stress
FX998_04315	COG1877	trehalose-phosphatase activity
FX998_04320	COG1172	Belongs to the binding-protein-dependent transport system permease family
FX998_04325	COG1129	ABC transporter
FX998_04330	COG1879	ABC-type sugar transport system periplasmic component
FX998_04335	COG1528	Iron-storage protein
FX998_04355	COG1528	Iron-storage protein
FX998_04365	COG0814	amino acid
FX998_04370	COG3012	SEC-C Motif Domain Protein
FX998_04370	COG3318	Belongs to the UPF0149 family
FX998_04390	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FX998_04400	COG2197	response regulator
FX998_04420	COG2197	response regulator
FX998_04450	COG1191	sigma factor activity
FX998_04460	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FX998_04465	COG1516	flagellar protein fliS
FX998_04475	COG0366	Alpha amylase catalytic
FX998_04485	COG2391	methyltransferase activity
FX998_04490	COG0425	Belongs to the sulfur carrier protein TusA family
FX998_04495	COG2135	peptidase activity
FX998_04520	COG1766	The M ring may be actively involved in energy transduction
FX998_04525	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FX998_04530	COG1317	bacterial-type flagellum organization
FX998_04540	COG2882	bacterial-type flagellum organization
FX998_04545	COG3144	bacterial-type flagellum assembly
FX998_04550	COG1580	Controls the rotational direction of flagella during chemotaxis
FX998_04555	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FX998_04560	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FX998_04565	COG3190	flagellar
FX998_04570	COG1338	Plays a role in the flagellum-specific transport system
FX998_04575	COG1987	bacterial-type flagellum assembly
FX998_04580	COG1684	flagellar biosynthetic protein fliR
FX998_04585	COG2197	response regulator
FX998_04610	COG5475	Uncharacterized small protein (DUF2158)
FX998_04615	COG2354	Protein conserved in bacteria
FX998_04620	COG0697	spore germination
FX998_04625	COG3727	T/G mismatch-specific endonuclease activity
FX998_04630	COG0270	DNA (cytosine-5-)-methyltransferase activity
FX998_04635	COG1418	mRNA catabolic process
FX998_04645	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FX998_04660	COG2205	protein histidine kinase activity
FX998_04665	COG0745	RESPONSE REGULATOR receiver
FX998_04670	COG2351	hydroxyisourate hydrolase activity
FX998_04685	COG3443	Belongs to the bacterial solute-binding protein 9 family
FX998_04690	COG3038	cytochrome b561
FX998_04710	COG0582	viral genome integration into host DNA
FX998_04715	COG1169	isochorismate synthase
FX998_04720	COG2814	Major facilitator Superfamily
FX998_04725	COG1132	(ABC) transporter
FX998_04740	COG3433	isochorismatase activity
FX998_04740	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FX998_04740	COG2226	methyltransferase
FX998_04760	COG1021	2,3-dihydroxybenzoate-AMP ligase
FX998_04765	COG4771	TonB-dependent receptor
FX998_04845	COG3504	Conjugal transfer protein
FX998_04930	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FX998_04950	COG0477	Major facilitator Superfamily
FX998_04955	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FX998_04970	COG0534	Mate efflux family protein
FX998_04980	COG0583	DNA-binding transcription factor activity
FX998_04985	COG0583	DNA-binding transcription factor activity
FX998_04995	COG1376	ErfK ybiS ycfS ynhG family protein
FX998_05010	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
FX998_05025	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FX998_05115	COG3468	outer membrane autotransporter barrel domain protein
FX998_05145	COG2003	Belongs to the UPF0758 family
FX998_05150	COG4584	PFAM Integrase catalytic
FX998_05155	COG1484	DNA-dependent DNA replication
FX998_05160	COG2003	Belongs to the UPF0758 family
FX998_05200	COG4917	ethanolamine utilization protein
FX998_05210	COG1289	transmembrane transporter activity
FX998_05215	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FX998_05220	COG1686	Belongs to the peptidase S11 family
FX998_05225	COG2925	Exonuclease
FX998_05230	COG0425	Belongs to the sulfur carrier protein TusA family
FX998_05235	COG2391	methyltransferase activity
FX998_05240	COG0531	amino acid
FX998_05250	COG0583	DNA-binding transcription factor activity
FX998_05255	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FX998_05260	COG4115	mRNA cleavage
FX998_05265	COG2161	toxin-antitoxin pair type II binding
FX998_05290	COG0131	Imidazoleglycerol-phosphate dehydratase
FX998_05290	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FX998_05295	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FX998_05310	COG0140	phosphoribosyl-ATP diphosphatase activity
FX998_05310	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FX998_05320	COG0438	transferase activity, transferring glycosyl groups
FX998_05330	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FX998_05380	COG1088	dTDP-glucose 4,6-dehydratase activity
FX998_05390	COG0110	maltose O-acetyltransferase activity
FX998_05405	COG0438	transferase activity, transferring glycosyl groups
FX998_05465	COG1253	flavin adenine dinucleotide binding
FX998_05480	COG2982	Protein involved in outer membrane biogenesis
FX998_05490	COG0572	uridine kinase
FX998_05495	COG5002	protein histidine kinase activity
FX998_05495	COG5001	Diguanylate cyclase
FX998_05495	COG3447	MASE1 domain protein
FX998_05500	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FX998_05505	COG0443	Heat shock 70 kDa protein
FX998_05515	COG0631	protein serine/threonine phosphatase activity
FX998_05520	COG4245	von Willebrand factor, type A
FX998_05560	COG2205	protein histidine kinase activity
FX998_05565	COG0745	RESPONSE REGULATOR receiver
FX998_05575	COG3609	addiction module antidote protein, CC2985 family
FX998_05610	COG1063	alcohol dehydrogenase
FX998_05615	COG3775	system Galactitol-specific IIC component
FX998_05620	COG3414	Phosphotransferase system galactitol-specific IIB component
FX998_05625	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_05640	COG1830	Aldolase
FX998_05645	COG2211	Major facilitator Superfamily
FX998_05650	COG1397	ADP-ribosylglycohydrolase
FX998_05655	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_05660	COG2188	Transcriptional regulator
FX998_05665	COG3757	hydrolase, family 25
FX998_05670	COG0351	phosphomethylpyrimidine kinase
FX998_05690	COG5455	response to cobalt ion
FX998_05695	COG3539	Fimbrial protein
FX998_05700	COG3188	usher protein
FX998_05705	COG3121	Chaperone
FX998_05710	COG3539	Fimbrial protein
FX998_05720	COG0489	protein tyrosine kinase activity
FX998_05730	COG3831	ATPase activity
FX998_05735	COG3831	ATPase activity
FX998_05740	COG3831	ATPase activity
FX998_05760	COG3552	Protein containing von Willebrand factor type A (VWA) domain
FX998_05765	COG4715	Zinc finger, swim domain protein
FX998_05770	COG4808	Protein conserved in bacteria
FX998_05775	COG4807	Protein conserved in bacteria
FX998_05780	COG3279	Response regulator of the LytR AlgR family
FX998_05785	COG3275	phosphorelay sensor kinase activity
FX998_05790	COG0789	Transcriptional regulator
FX998_05800	COG1174	glycine betaine transport
FX998_05805	COG1125	glycine betaine transport
FX998_05810	COG1174	glycine betaine transport
FX998_05815	COG1732	Glycine betaine
FX998_05820	COG1472	Belongs to the glycosyl hydrolase 3 family
FX998_05825	COG0277	FAD linked oxidase domain protein
FX998_05830	COG1686	Belongs to the peptidase S11 family
FX998_05840	COG0586	Pfam SNARE associated Golgi protein
FX998_05845	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_05860	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FX998_05870	COG1346	cytolysis
FX998_05880	COG2949	membrane
FX998_05890	COG0493	'glutamate synthase
FX998_05895	COG0167	dihydroorotate dehydrogenase activity
FX998_05895	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FX998_05900	COG4211	Belongs to the binding-protein-dependent transport system permease family
FX998_05905	COG1129	ABC transporter
FX998_05910	COG1879	ABC-type sugar transport system periplasmic component
FX998_05915	COG1609	Transcriptional regulator
FX998_05920	COG2311	Membrane
FX998_05940	COG0833	amino acid
FX998_05945	COG0583	DNA-binding transcription factor activity
FX998_05950	COG2855	membrane
FX998_05960	COG1522	sequence-specific DNA binding
FX998_05960	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_05965	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FX998_05975	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FX998_05980	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FX998_05985	COG2313	pseudouridylate synthase activity
FX998_05990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_05995	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_05995	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FX998_05995	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_06000	COG1105	Belongs to the carbohydrate kinase PfkB family
FX998_06005	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_06005	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_06010	COG2814	Major facilitator Superfamily
FX998_06025	COG0246	Mannitol dehydrogenase
FX998_06030	COG0523	cobalamin synthesis protein
FX998_06035	COG0671	phosphoesterase, PA-phosphatase related
FX998_06040	COG0791	NLP P60 protein
FX998_06045	COG2200	EAL domain
FX998_06050	COG4166	transmembrane transport
FX998_06055	COG4174	ABC transporter (Permease)
FX998_06060	COG4239	(ABC) transporter, permease
FX998_06065	COG4172	Belongs to the ABC transporter superfamily
FX998_06075	COG2814	Major facilitator Superfamily
FX998_06080	COG1187	pseudouridine synthase activity
FX998_06085	COG1061	Type III restriction enzyme res subunit
FX998_06105	COG3083	sulfuric ester hydrolase activity
FX998_06140	COG5301	cellulose 1,4-beta-cellobiosidase activity
FX998_06175	COG1196	nuclear chromosome segregation
FX998_06225	COG1030	water channel activity
FX998_06245	COG4220	transposase activity
FX998_06260	COG5562	phage envelope protein
FX998_06280	COG3772	lysozyme
FX998_06290	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FX998_06305	COG0484	heat shock protein binding
FX998_06310	COG1403	HNH endonuclease
FX998_06320	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
FX998_06325	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FX998_06330	COG4725	Belongs to the MT-A70-like family
FX998_06340	COG1846	Transcriptional regulator
FX998_06390	COG5532	Uncharacterized conserved protein (DUF2303)
FX998_06395	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FX998_06435	COG3468	outer membrane autotransporter barrel domain protein
FX998_06440	COG2197	response regulator
FX998_06445	COG4235	cytochrome complex assembly
FX998_06445	COG3088	subunit of a heme lyase
FX998_06450	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FX998_06455	COG1138	Cytochrome C-type biogenesis protein
FX998_06465	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FX998_06470	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FX998_06475	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FX998_06485	COG3005	denitrification pathway
FX998_06490	COG3043	anaerobic respiration
FX998_06495	COG0348	domain, Protein
FX998_06500	COG0437	4 iron, 4 sulfur cluster binding
FX998_06510	COG3062	negative regulation of establishment of protein localization
FX998_06515	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_06515	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_06530	COG4615	Cyclic peptide transporter
FX998_06535	COG3145	DNA-N1-methyladenine dioxygenase activity
FX998_06540	COG2169	Transcriptional regulator
FX998_06540	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FX998_06545	COG1477	protein flavinylation
FX998_06550	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FX998_06555	COG0642	Histidine kinase
FX998_06555	COG2198	Histidine kinase
FX998_06560	COG2197	response regulator
FX998_06565	COG0784	Response regulator, receiver
FX998_06565	COG2205	protein histidine kinase activity
FX998_06570	COG3852	Histidine kinase
FX998_06575	COG2204	response regulator
FX998_06580	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FX998_06585	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FX998_06590	COG2031	fatty acid transporter
FX998_06595	COG0183	Belongs to the thiolase family
FX998_06600	COG4676	Protein conserved in bacteria
FX998_06605	COG5445	Predicted secreted protein (DUF2300)
FX998_06610	COG2373	Large extracellular alpha-helical protein
FX998_06615	COG3234	Protein of unknown function (DUF1175)
FX998_06620	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
FX998_06625	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FX998_06635	COG3468	outer membrane autotransporter barrel domain protein
FX998_06640	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FX998_06645	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FX998_06650	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FX998_06655	COG3642	lipopolysaccharide core region biosynthetic process
FX998_06665	COG0584	glycerophosphoryl diester phosphodiesterase
FX998_06670	COG2271	Major facilitator Superfamily
FX998_06675	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FX998_06685	COG0247	lactate metabolic process
FX998_06690	COG5464	transposase or invertase
FX998_06705	COG2271	Major facilitator Superfamily
FX998_06780	COG0318	PFAM AMP-dependent synthetase and ligase
FX998_06790	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FX998_06805	COG1169	isochorismate synthase
FX998_06810	COG4575	ribosome binding
FX998_06815	COG2153	protein acetylation
FX998_06825	COG5160	protein modification by small protein removal
FX998_06830	COG2304	oxidoreductase activity
FX998_06835	COG2234	aminopeptidase activity
FX998_06855	COG0457	Tetratricopeptide repeat
FX998_06865	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FX998_06870	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FX998_06880	COG0839	Belongs to the complex I subunit 6 family
FX998_06885	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FX998_06895	COG1034	ATP synthesis coupled electron transport
FX998_06900	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FX998_06905	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FX998_06925	COG0583	DNA-binding transcription factor activity
FX998_06930	COG0436	Aminotransferase
FX998_06940	COG0471	metal ion transport
FX998_06940	COG0490	domain, Protein
FX998_06945	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FX998_06960	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FX998_06965	COG0280	phosphate acetyltransferase
FX998_06965	COG0857	belongs to the CobB CobQ family
FX998_06970	COG1288	antiporter activity
FX998_06975	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FX998_06980	COG0622	Phosphoesterase
FX998_06985	COG0625	glutathione transferase activity
FX998_06990	COG0625	glutathione transferase activity
FX998_06995	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FX998_07000	COG1090	epimerase
FX998_07005	COG5464	transposase or invertase
FX998_07010	COG4598	ABC transporter
FX998_07015	COG4160	amino acid transport
FX998_07020	COG4215	(ABC) transporter
FX998_07025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_07030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_07035	COG0163	prenyltransferase activity
FX998_07040	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FX998_07045	COG1286	toxin biosynthetic process
FX998_07050	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FX998_07055	COG0285	dihydrofolate synthase activity
FX998_07065	COG0586	Pfam SNARE associated Golgi protein
FX998_07075	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FX998_07090	COG2814	Major facilitator Superfamily
FX998_07095	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FX998_07110	COG3101	peptidyl-lysine hydroxylation
FX998_07115	COG0730	response to heat
FX998_07130	COG2890	protein-(glutamine-N5) methyltransferase activity
FX998_07145	COG3539	Fimbrial protein
FX998_07150	COG3539	Fimbrial protein
FX998_07155	COG3539	Fimbrial protein
FX998_07160	COG3121	Chaperone
FX998_07165	COG3188	usher protein
FX998_07170	COG3539	Fimbrial protein
FX998_07175	COG2062	phosphohistidine phosphatase, SixA
FX998_07190	COG3691	Protein conserved in bacteria
FX998_07195	COG2067	long-chain fatty acid transport protein
FX998_07200	COG3547	Transposase (IS116 IS110 IS902 family)
FX998_07210	COG2853	Lipoprotein
FX998_07215	COG2116	formate transmembrane transporter activity
FX998_07255	COG0477	Major facilitator Superfamily
FX998_07260	COG1566	PFAM secretion protein HlyD family protein
FX998_07265	COG2197	response regulator
FX998_07270	COG2198	Histidine kinase
FX998_07270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_07270	COG0784	Response regulator, receiver
FX998_07270	COG2205	protein histidine kinase activity
FX998_07275	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FX998_07280	COG0679	Auxin Efflux Carrier
FX998_07285	COG0028	Belongs to the TPP enzyme family
FX998_07310	COG1560	Kdo2-lipid A biosynthetic process
FX998_07320	COG0436	Aminotransferase
FX998_07325	COG3275	phosphorelay sensor kinase activity
FX998_07330	COG3279	Response regulator of the LytR AlgR family
FX998_07340	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_07340	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FX998_07340	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_07345	COG1363	Peptidase, m42
FX998_07350	COG0006	proline dipeptidase activity
FX998_07355	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_07360	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_07370	COG0038	chloride channel
FX998_07385	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FX998_07390	COG3385	transposase activity
FX998_07395	COG2199	diguanylate cyclase activity
FX998_07395	COG2200	EAL domain
FX998_07410	COG3415	Transposase
FX998_07415	COG3415	Transposase
FX998_07445	COG0583	DNA-binding transcription factor activity
FX998_07455	COG2211	Major facilitator Superfamily
FX998_07460	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FX998_07470	COG0583	DNA-binding transcription factor activity
FX998_07475	COG0385	Bile acid
FX998_07480	COG3530	Putative quorum-sensing-regulated virulence factor
FX998_07500	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FX998_07505	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_07510	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FX998_07515	COG2190	(PTS) system
FX998_07530	COG4884	unkown
FX998_07530	COG3831	ATPase activity
FX998_07535	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FX998_07540	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FX998_07545	COG4208	sulfate ABC transporter
FX998_07550	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FX998_07555	COG4150	thiosulfate binding
FX998_07560	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_07575	COG1263	PTS System
FX998_07575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_07580	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FX998_07585	COG2837	iron assimilation
FX998_07600	COG0456	acetyltransferase
FX998_07605	COG0860	N-Acetylmuramoyl-L-alanine amidase
FX998_07615	COG2207	Transcriptional regulator
FX998_07620	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FX998_07625	COG4816	utilization protein
FX998_07635	COG4303	Ethanolamine ammonia lyase large subunit
FX998_07640	COG4819	ethanolamine utilization protein
FX998_07645	COG3192	ethanolamine utilization protein
FX998_07650	COG1454	alcohol dehydrogenase
FX998_07655	COG4820	ethanolamine utilization protein (EutJ)
FX998_07660	COG1012	belongs to the aldehyde dehydrogenase family
FX998_07665	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
FX998_07670	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FX998_07675	COG0280	phosphate acetyltransferase
FX998_07680	COG4812	Cobalamin adenosyltransferase
FX998_07685	COG4766	ethanolamine catabolic process
FX998_07690	COG4917	ethanolamine utilization protein
FX998_07695	COG4810	utilization protein
FX998_07700	COG0281	malic enzyme
FX998_07700	COG0280	phosphate acetyltransferase
FX998_07705	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FX998_07710	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FX998_07715	COG5342	invasion associated locus B
FX998_07725	COG0493	'glutamate synthase
FX998_07725	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_07730	COG3850	Histidine kinase
FX998_07735	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FX998_07745	COG1393	Belongs to the ArsC family
FX998_07760	COG0400	carboxylic ester hydrolase activity
FX998_07765	COG1444	tRNA N-acetyltransferase activity
FX998_07770	COG2321	neutral zinc metallopeptidase
FX998_07780	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FX998_07790	COG2716	regulation of RNA biosynthetic process
FX998_07795	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FX998_07800	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_07805	COG0651	ATP synthesis coupled electron transport
FX998_07810	COG0650	Formate hydrogenlyase subunit 4
FX998_07815	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FX998_07820	COG4237	Hydrogenase 4 membrane
FX998_07825	COG0651	ATP synthesis coupled electron transport
FX998_07830	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FX998_07830	COG3261	NADH dehydrogenase
FX998_07835	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FX998_07840	COG3260	NADH ubiquinone oxidoreductase 20
FX998_07850	COG3604	Transcriptional regulator
FX998_07855	COG2116	formate transmembrane transporter activity
FX998_07860	COG0628	permease
FX998_07865	COG4783	chaperone-mediated protein folding
FX998_07870	COG1393	Belongs to the ArsC family
FX998_07880	COG2233	PERMEase
FX998_07895	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FX998_07900	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FX998_07905	COG0248	Ppx GppA phosphatase
FX998_07910	COG2200	EAL domain
FX998_07920	COG3133	Outer membrane lipoprotein
FX998_07935	COG0517	IMP dehydrogenase activity
FX998_07935	COG0516	GMP reductase activity
FX998_07945	COG1645	bacterial-type flagellum-dependent swarming motility
FX998_07960	COG2976	Protein conserved in bacteria
FX998_07990	COG4953	penicillin-binding protein 1C
FX998_07995	COG2373	Large extracellular alpha-helical protein
FX998_08000	COG2897	thiosulfate sulfurtransferase activity
FX998_08015	COG2975	iron-sulfur cluster assembly
FX998_08020	COG0633	Ferredoxin
FX998_08040	COG0822	iron-sulfur transferase activity
FX998_08060	COG0483	inositol monophosphate 1-phosphatase activity
FX998_08065	COG1073	alpha beta
FX998_08070	COG3711	transcriptional antiterminator
FX998_08075	COG2814	Major facilitator Superfamily
FX998_08080	COG0583	DNA-binding transcription factor activity
FX998_08085	COG4638	Rieske (2fe-2S)
FX998_08110	COG2259	Doxx family
FX998_08115	COG2017	converts alpha-aldose to the beta-anomer
FX998_08120	COG1063	alcohol dehydrogenase
FX998_08125	COG1172	Belongs to the binding-protein-dependent transport system permease family
FX998_08130	COG1129	ABC transporter
FX998_08135	COG1879	ABC-type sugar transport system periplasmic component
FX998_08140	COG0457	Tetratricopeptide repeat
FX998_08145	COG1940	carbohydrate kinase activity
FX998_08155	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FX998_08155	COG1017	nitric oxide dioxygenase activity
FX998_08160	COG0347	Belongs to the P(II) protein family
FX998_08165	COG2204	response regulator
FX998_08170	COG3170	Tfp pilus assembly protein FimV
FX998_08175	COG2205	protein histidine kinase activity
FX998_08180	COG0047	phosphoribosylformylglycinamidine synthase activity
FX998_08180	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FX998_08190	COG0590	tRNA wobble adenosine to inosine editing
FX998_08195	COG0560	Phosphoserine phosphatase
FX998_08200	COG1737	Transcriptional regulator
FX998_08205	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_08220	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FX998_08240	COG0681	Belongs to the peptidase S26 family
FX998_08250	COG3086	response to oxidative stress
FX998_08255	COG3026	antisigma factor binding
FX998_08260	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FX998_08265	COG1595	DNA-templated transcription, initiation
FX998_08275	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FX998_08280	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FX998_08285	COG0513	Belongs to the DEAD box helicase family
FX998_08290	COG0583	DNA-binding transcription factor activity
FX998_08310	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FX998_08315	COG3118	belongs to the thioredoxin family
FX998_08325	COG1042	CoA-binding domain protein
FX998_08325	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FX998_08325	COG0045	succinate-CoA ligase (ADP-forming) activity
FX998_08330	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FX998_08335	COG5544	Lipoprotein
FX998_08340	COG0477	Major facilitator Superfamily
FX998_08365	COG0542	response to heat
FX998_08375	COG0564	pseudouridine synthase activity
FX998_08380	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FX998_08385	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FX998_08395	COG1605	Chorismate mutase
FX998_08395	COG0077	Prephenate dehydratase
FX998_08400	COG0287	Prephenate dehydrogenase
FX998_08400	COG1605	Chorismate mutase
FX998_08405	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FX998_08420	COG2199	diguanylate cyclase activity
FX998_08425	COG2885	chlorophyll binding
FX998_08450	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FX998_08455	COG4137	Cytochrome C assembly protein
FX998_08460	COG4536	flavin adenine dinucleotide binding
FX998_08475	COG0497	DNA recombination
FX998_08480	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FX998_08485	COG2914	Belongs to the UPF0125 (RnfH) family
FX998_08490	COG2867	negative regulation of translational initiation
FX998_08505	COG3468	outer membrane autotransporter barrel domain protein
FX998_08545	COG0579	oxidoreductase
FX998_08550	COG1012	belongs to the aldehyde dehydrogenase family
FX998_08555	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FX998_08560	COG1113	amino acid transport
FX998_08565	COG1802	Transcriptional regulator
FX998_08570	COG1652	LysM domain
FX998_08575	COG0401	homolog of Blt101
FX998_08580	COG0640	Transcriptional regulator
FX998_08585	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FX998_08590	COG2916	Histone family protein nucleoid-structuring protein H-NS
FX998_08605	COG4575	ribosome binding
FX998_08610	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FX998_08615	COG1780	Probably involved in ribonucleotide reductase function
FX998_08620	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FX998_08625	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FX998_08630	COG4175	Glycine betaine
FX998_08635	COG4176	ABC-type proline glycine betaine transport system permease component
FX998_08640	COG2113	Glycine betaine
FX998_08645	COG2814	Major facilitator Superfamily
FX998_08650	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FX998_08660	COG1846	Transcriptional regulator
FX998_08665	COG1566	PFAM secretion protein HlyD family protein
FX998_08670	COG2814	Major facilitator Superfamily
FX998_08685	COG1238	metal cluster binding
FX998_08690	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FX998_08740	COG1546	Belongs to the CinA family
FX998_08745	COG2951	lytic endotransglycosylase activity
FX998_08750	COG3730	PTS system glucitol sorbitol-specific
FX998_08755	COG3732	PTS system glucitol sorbitol-specific
FX998_08760	COG3731	PTS system glucitol sorbitol-specific IIA component
FX998_08765	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_08770	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_08775	COG1349	DNA-binding transcription factor activity
FX998_08780	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FX998_08780	COG0517	IMP dehydrogenase activity
FX998_08800	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FX998_08805	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_08810	COG1609	Transcriptional regulator
FX998_08815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_08815	COG1263	PTS System
FX998_08820	COG2723	6-phospho-beta-galactosidase activity
FX998_08825	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FX998_08835	COG3260	NADH ubiquinone oxidoreductase 20
FX998_08840	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FX998_08845	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FX998_08845	COG3261	NADH dehydrogenase
FX998_08850	COG0650	Formate hydrogenlyase subunit 4
FX998_08855	COG0651	ATP synthesis coupled electron transport
FX998_08860	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_08875	COG0375	protein maturation
FX998_08880	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FX998_08885	COG0298	carbon dioxide binding
FX998_08890	COG0409	Hydrogenase expression formation protein
FX998_08895	COG0309	Hydrogenase expression formation protein (HypE)
FX998_08900	COG3604	Transcriptional regulator
FX998_08915	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FX998_08920	COG1349	DNA-binding transcription factor activity
FX998_08925	COG2084	Dehydrogenase
FX998_08930	COG3395	kinase activity
FX998_08935	COG0235	Class ii aldolase
FX998_08940	COG3622	Belongs to the hyi family
FX998_08945	COG2610	gluconate transmembrane transporter activity
FX998_08950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FX998_08955	COG4942	peptidase
FX998_08955	COG1388	LysM domain
FX998_09010	COG2234	aminopeptidase activity
FX998_09015	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FX998_09020	COG1518	maintenance of DNA repeat elements
FX998_09035	COG1857	crispr-associated protein
FX998_09050	COG1203	CRISPR-associated helicase, Cas3
FX998_09075	COG0720	synthase
FX998_09080	COG0644	oxidoreductase
FX998_09085	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FX998_09090	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FX998_09095	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FX998_09100	COG2086	electron transfer activity
FX998_09105	COG0477	Major facilitator Superfamily
FX998_09110	COG0277	FAD linked oxidase domain protein
FX998_09115	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_09120	COG2223	nitrite transmembrane transporter activity
FX998_09125	COG1070	Carbohydrate kinase
FX998_09130	COG0602	queuosine metabolic process
FX998_09140	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FX998_09155	COG3956	TIGRFAM MazG family protein
FX998_09160	COG2337	Toxic component of a toxin-antitoxin (TA) module
FX998_09165	COG2336	PFAM SpoVT AbrB
FX998_09170	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FX998_09175	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FX998_09180	COG2205	protein histidine kinase activity
FX998_09180	COG4999	Histidine kinase
FX998_09180	COG3850	Histidine kinase
FX998_09180	COG3437	response regulator, receiver
FX998_09185	COG4948	Mandelate Racemase Muconate Lactonizing
FX998_09190	COG4948	Mandelate Racemase Muconate Lactonizing
FX998_09195	COG2271	Major facilitator Superfamily
FX998_09200	COG0716	FMN binding
FX998_09205	COG0564	pseudouridine synthase activity
FX998_09210	COG3098	single-species biofilm formation
FX998_09225	COG1611	Belongs to the LOG family
FX998_09230	COG0814	amino acid
FX998_09235	COG1760	l-serine dehydratase
FX998_09245	COG1454	alcohol dehydrogenase
FX998_09250	COG0235	Class ii aldolase
FX998_09255	COG0738	Major facilitator superfamily
FX998_09265	COG1070	Carbohydrate kinase
FX998_09275	COG1349	DNA-binding transcription factor activity
FX998_09285	COG2363	Small membrane protein
FX998_09290	COG0583	DNA-binding transcription factor activity
FX998_09300	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FX998_09305	COG2166	iron-sulfur cluster assembly
FX998_09310	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FX998_09315	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FX998_09335	COG0860	N-Acetylmuramoyl-L-alanine amidase
FX998_09340	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FX998_09340	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FX998_09345	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FX998_09350	COG1074	ATP-dependent DNA helicase activity
FX998_09355	COG1025	Belongs to the peptidase M16 family
FX998_09360	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FX998_09365	COG4967	type IV pilus modification protein PilV
FX998_09375	COG4795	General secretion pathway protein
FX998_09380	COG2165	general secretion pathway protein
FX998_09395	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
FX998_09415	COG0861	Integral membrane protein TerC family
FX998_09425	COG0667	Aldo Keto reductase
FX998_09445	COG1609	Transcriptional regulator
FX998_09450	COG0019	diaminopimelate decarboxylase activity
FX998_09455	COG0583	DNA-binding transcription factor activity
FX998_09460	COG1794	racemase activity, acting on amino acids and derivatives
FX998_09465	COG2814	Major facilitator Superfamily
FX998_09470	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_09480	COG0183	Belongs to the thiolase family
FX998_09485	COG0814	amino acid
FX998_09490	COG2771	luxR family
FX998_09495	COG3710	Transcriptional regulator
FX998_09520	COG0457	Tetratricopeptide repeat
FX998_09525	COG0457	Tetratricopeptide repeat
FX998_09525	COG3710	Transcriptional regulator
FX998_09625	COG3385	transposase activity
FX998_09660	COG4974	Belongs to the 'phage' integrase family
FX998_09670	COG4942	peptidase
FX998_09675	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FX998_09680	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FX998_09685	COG2080	2 iron, 2 sulfur cluster binding
FX998_09695	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FX998_09700	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FX998_09705	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FX998_09715	COG0549	Belongs to the carbamate kinase family
FX998_09720	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FX998_09720	COG3608	succinylglutamate desuccinylase aspartoacylase
FX998_09725	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FX998_09730	COG2068	MobA-Related Protein
FX998_09735	COG0493	'glutamate synthase
FX998_09735	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_09740	COG0402	S-adenosylhomocysteine deaminase activity
FX998_09745	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FX998_09750	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FX998_09750	COG2080	2 iron, 2 sulfur cluster binding
FX998_09755	COG2233	PERMEase
FX998_09760	COG0402	S-adenosylhomocysteine deaminase activity
FX998_09765	COG2252	PERMEase
FX998_09770	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_09780	COG2233	PERMEase
FX998_09800	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FX998_09810	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FX998_09815	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FX998_09820	COG4974	Belongs to the 'phage' integrase family
FX998_09825	COG0716	FMN binding
FX998_09835	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FX998_09845	COG1272	protein, Hemolysin III
FX998_09855	COG2723	6-phospho-beta-galactosidase activity
FX998_09860	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_09885	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FX998_09890	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FX998_09895	COG0006	proline dipeptidase activity
FX998_09915	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FX998_09925	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FX998_09945	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FX998_09945	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FX998_09950	COG1703	isobutyryl-CoA mutase activity
FX998_09955	COG1024	Enoyl-CoA hydratase
FX998_09960	COG0427	acetyl-CoA hydrolase
FX998_09965	COG0583	DNA-binding transcription factor activity
FX998_09970	COG2968	Membrane
FX998_09975	COG1279	arginine transmembrane transporter activity
FX998_09980	COG0668	transmembrane transport
FX998_09985	COG0191	fructose-bisphosphate aldolase activity
FX998_10000	COG1072	(Pantothenic acid kinase))
FX998_10005	COG3722	fumarate hydratase activity
FX998_10010	COG1494	fructose-1,6-bisphosphatase
FX998_10015	COG1063	alcohol dehydrogenase
FX998_10020	COG2213	PTS system mannitol-specific
FX998_10025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_10030	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FX998_10035	COG0501	Belongs to the peptidase M48B family
FX998_10045	COG1166	arginine decarboxylase activity
FX998_10060	COG2814	Major facilitator Superfamily
FX998_10070	COG2356	endonuclease I
FX998_10075	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FX998_10080	COG0189	ligase activity
FX998_10095	COG2805	Type II/IV secretion system protein
FX998_10100	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FX998_10105	COG0762	integral membrane protein
FX998_10115	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FX998_10120	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FX998_10130	COG0252	asparaginase activity
FX998_10140	COG3171	Protein conserved in bacteria
FX998_10150	COG1194	a g-specific adenine glycosylase
FX998_10165	COG2211	Major facilitator Superfamily
FX998_10170	COG1982	Orn Lys Arg decarboxylase major
FX998_10175	COG1811	Na channel or pump
FX998_10200	COG2194	sulfuric ester hydrolase activity
FX998_10225	COG1201	RNA secondary structure unwinding
FX998_10245	COG1484	DNA-dependent DNA replication
FX998_10250	COG4584	PFAM Integrase catalytic
FX998_10260	COG1475	DNA binding
FX998_10265	COG3969	phosphoadenosine phosphosulfate
FX998_10320	COG4869	propanediol catabolic process
FX998_10325	COG4820	ethanolamine utilization protein (EutJ)
FX998_10350	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FX998_10360	COG1012	belongs to the aldehyde dehydrogenase family
FX998_10370	COG0693	protein deglycase activity
FX998_10380	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FX998_10400	COG3344	reverse transcriptase
FX998_10410	COG2972	Histidine kinase
FX998_10415	COG2207	Transcriptional regulator
FX998_10425	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FX998_10470	COG1522	sequence-specific DNA binding
FX998_10470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_10475	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FX998_10480	COG2313	pseudouridylate synthase activity
FX998_10485	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_10490	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FX998_10525	COG3596	GTP binding
FX998_10530	COG2378	regulation of single-species biofilm formation
FX998_10555	COG2003	Belongs to the UPF0758 family
FX998_10590	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FX998_10605	COG4795	General secretion pathway protein
FX998_10620	COG2165	general secretion pathway protein
FX998_10625	COG1459	type II secretion system
FX998_10640	COG3031	protein transport across the cell outer membrane
FX998_10650	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FX998_10655	COG3064	Membrane
FX998_10660	COG1620	l-lactate permease
FX998_10665	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FX998_10670	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FX998_10675	COG0247	lactate metabolic process
FX998_10680	COG0277	FAD linked oxidase domain protein
FX998_10685	COG0277	FAD linked oxidase domain protein
FX998_10690	COG2186	Transcriptional regulator
FX998_10695	COG0456	acetyltransferase
FX998_10700	COG0318	PFAM AMP-dependent synthetase and ligase
FX998_10710	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FX998_10715	COG0156	8-amino-7-oxononanoate synthase activity
FX998_10725	COG0795	lipopolysaccharide-transporting ATPase activity
FX998_10730	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FX998_10740	COG2244	polysaccharide biosynthetic process
FX998_10745	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FX998_10750	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FX998_10755	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FX998_10760	COG0306	phosphate transporter
FX998_10765	COG0754	glutathionylspermidine amidase activity
FX998_10770	COG0625	glutathione transferase activity
FX998_10775	COG0298	carbon dioxide binding
FX998_10780	COG0375	protein maturation
FX998_10785	COG1773	rubredoxin
FX998_10790	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FX998_10795	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FX998_10800	COG5557	Pfam Polysulphide reductase, NrfD
FX998_10805	COG0437	4 iron, 4 sulfur cluster binding
FX998_10810	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FX998_10825	COG0667	Aldo Keto reductase
FX998_10835	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_10840	COG0848	biopolymer transport protein
FX998_10845	COG0811	peptide transport
FX998_10850	COG0626	cystathionine gamma-synthase activity
FX998_10855	COG0586	Pfam SNARE associated Golgi protein
FX998_10860	COG2207	Transcriptional regulator
FX998_10865	COG1979	alcohol dehydrogenase
FX998_10870	COG0656	L-ascorbic acid biosynthetic process
FX998_10880	COG4238	major outer membrane lipoprotein
FX998_10885	COG1032	radical SAM domain protein
FX998_10890	COG2132	Multicopper oxidase
FX998_10895	COG0204	Acyl-transferase
FX998_10900	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FX998_10905	COG4166	transmembrane transport
FX998_10910	COG2944	sequence-specific DNA binding
FX998_10920	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FX998_10925	COG3111	PFAM Bacterial OB fold (BOF) protein
FX998_10930	COG0745	RESPONSE REGULATOR receiver
FX998_10935	COG0642	Histidine kinase
FX998_10945	COG2249	NAD(P)H dehydrogenase (quinone) activity
FX998_10950	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FX998_10955	COG0187	DNA topoisomerase II activity
FX998_10960	COG3150	esterase
FX998_10965	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FX998_10970	COG3151	Protein conserved in bacteria
FX998_10975	COG0494	nUDIX hydrolase
FX998_10980	COG1538	Outer membrane efflux protein
FX998_10990	COG0754	glutathionylspermidine amidase activity
FX998_10995	COG3384	dioxygenase
FX998_11010	COG2960	long-chain fatty acid transporting porin activity
FX998_11015	COG3539	Fimbrial protein
FX998_11035	COG3121	Chaperone
FX998_11040	COG3539	Fimbrial protein
FX998_11050	COG1585	Membrane protein implicated in regulation of membrane protease activity
FX998_11060	COG2268	Band 7 protein
FX998_11085	COG3025	triphosphatase activity
FX998_11090	COG4991	sh3 domain protein
FX998_11100	COG1968	undecaprenyl-diphosphatase activity
FX998_11105	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FX998_11115	COG0583	DNA-binding transcription factor activity
FX998_11130	COG0471	metal ion transport
FX998_11145	COG0358	DNA primase activity
FX998_11150	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FX998_11165	COG2375	cellular response to nickel ion
FX998_11170	COG1695	Transcriptional regulator
FX998_11175	COG0840	transmembrane signaling receptor activity
FX998_11185	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FX998_11190	COG1609	Transcriptional regulator
FX998_11195	COG3250	beta-galactosidase activity
FX998_11200	COG2731	YhcH YjgK YiaL family protein
FX998_11205	COG0531	amino acid
FX998_11215	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FX998_11215	COG3408	Glycogen debranching enzyme
FX998_11220	COG0446	pyridine nucleotide-disulphide oxidoreductase
FX998_11220	COG1902	pentaerythritol trinitrate reductase activity
FX998_11225	COG5499	transcription regulator containing HTH domain
FX998_11230	COG4680	protein conserved in bacteria
FX998_11240	COG1451	nucleotide metabolic process
FX998_11245	COG2949	membrane
FX998_11250	COG0673	inositol 2-dehydrogenase activity
FX998_11255	COG0861	Integral membrane protein TerC family
FX998_11260	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FX998_11270	COG2721	sulfolactate sulfo-lyase activity
FX998_11280	COG2271	Major facilitator Superfamily
FX998_11285	COG2186	Transcriptional regulator
FX998_11290	COG0586	Pfam SNARE associated Golgi protein
FX998_11300	COG1422	Protein of unknown function (DUF1090)
FX998_11305	COG4575	ribosome binding
FX998_11310	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
FX998_11320	COG2259	Doxx family
FX998_11325	COG0435	Glutathione S-transferase
FX998_11330	COG3152	Membrane
FX998_11340	COG3152	Membrane
FX998_11345	COG0583	DNA-binding transcription factor activity
FX998_11350	COG1741	Belongs to the pirin family
FX998_11365	COG0814	amino acid
FX998_11370	COG1760	l-serine dehydratase
FX998_11375	COG0251	oxidation-reduction process
FX998_11380	COG1882	Formate acetyltransferase
FX998_11385	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FX998_11395	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FX998_11400	COG0583	DNA-binding transcription factor activity
FX998_11425	COG1929	Belongs to the glycerate kinase type-1 family
FX998_11430	COG2084	Dehydrogenase
FX998_11440	COG2271	Major facilitator Superfamily
FX998_11445	COG2721	sulfolactate sulfo-lyase activity
FX998_11450	COG2002	toxin-antitoxin pair type II binding
FX998_11460	COG1349	DNA-binding transcription factor activity
FX998_11470	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_11480	COG3716	PTS system mannose fructose sorbose family IID component
FX998_11485	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_11490	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FX998_11495	COG2222	sugar isomerase
FX998_11505	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_11515	COG3715	PTS system
FX998_11520	COG3716	PTS system mannose fructose sorbose family IID component
FX998_11525	COG0363	glucosamine-6-phosphate deaminase activity
FX998_11530	COG3539	Fimbrial protein
FX998_11535	COG3121	Chaperone
FX998_11540	COG3188	usher protein
FX998_11545	COG3539	Fimbrial protein
FX998_11550	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FX998_11555	COG3107	peptidoglycan biosynthetic process
FX998_11565	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FX998_11570	COG2823	Periplasmic or secreted lipoprotein
FX998_11575	COG0701	Predicted permease
FX998_11580	COG0702	epimerase
FX998_11585	COG0693	protein deglycase activity
FX998_11600	COG3153	acetyltransferase
FX998_11620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FX998_11625	COG0814	amino acid
FX998_11630	COG0513	Belongs to the DEAD box helicase family
FX998_11640	COG4785	May be involved in cell division
FX998_11655	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FX998_11670	COG0195	Participates in both transcription termination and antitermination
FX998_11690	COG2194	sulfuric ester hydrolase activity
FX998_11700	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FX998_11710	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FX998_11715	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FX998_11725	COG1534	Rna-binding protein
FX998_11730	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FX998_11735	COG2027	D-alanyl-D-alanine carboxypeptidase
FX998_11745	COG0697	spore germination
FX998_11760	COG0142	geranyltranstransferase activity
FX998_11765	COG3423	Transcriptional regulator
FX998_11775	COG5007	Belongs to the BolA IbaG family
FX998_11780	COG3113	response to antibiotic
FX998_11785	COG2854	intermembrane phospholipid transfer
FX998_11790	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FX998_11795	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FX998_11800	COG1127	ABC transporter
FX998_11805	COG0530	calcium, potassium:sodium antiporter activity
FX998_11810	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FX998_11810	COG0517	IMP dehydrogenase activity
FX998_11815	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FX998_11820	COG3117	lipopolysaccharide transmembrane transporter activity
FX998_11825	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FX998_11830	COG1137	ATPase activity
FX998_11835	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FX998_11840	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FX998_11845	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_11855	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_11860	COG0515	serine threonine protein kinase
FX998_11870	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FX998_11875	COG5002	protein histidine kinase activity
FX998_11875	COG2198	Histidine kinase
FX998_11875	COG0784	Response regulator, receiver
FX998_11880	COG1242	4 iron, 4 sulfur cluster binding
FX998_11885	COG0069	glutamate synthase activity
FX998_11885	COG0067	glutamate synthase
FX998_11885	COG0070	glutamate synthase
FX998_11890	COG0493	'glutamate synthase
FX998_11895	COG3539	Fimbrial protein
FX998_11900	COG3121	Chaperone
FX998_11905	COG3188	usher protein
FX998_11915	COG3539	Fimbrial protein
FX998_11945	COG4804	nuclease activity
FX998_11950	COG2731	YhcH YjgK YiaL family protein
FX998_11980	COG3069	C4-dicarboxylate transmembrane transporter activity
FX998_11985	COG2969	positive regulation of protein catabolic process
FX998_11990	COG0625	glutathione transferase activity
FX998_12005	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FX998_12010	COG3105	Protein conserved in bacteria
FX998_12015	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FX998_12020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FX998_12040	COG2732	(Barnase) inhibitor
FX998_12060	COG0583	DNA-binding transcription factor activity
FX998_12065	COG0312	modulator of DNA gyrase
FX998_12070	COG3164	Protein of unknown function
FX998_12075	COG1530	ribonuclease E activity
FX998_12080	COG0424	maF-like protein
FX998_12085	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FX998_12090	COG1792	Involved in formation and maintenance of cell shape
FX998_12095	COG1077	Cell shape determining protein MreB Mrl
FX998_12100	COG2200	EAL domain
FX998_12100	COG2199	diguanylate cyclase activity
FX998_12105	COG0604	alcohol dehydrogenase
FX998_12110	COG0511	ligase activity, forming carbon-carbon bonds
FX998_12115	COG0439	Biotin carboxylase
FX998_12120	COG3924	membrane
FX998_12125	COG4145	pantothenate transmembrane transporter activity
FX998_12135	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FX998_12145	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FX998_12165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FX998_12175	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_12180	COG4597	amino acid ABC transporter
FX998_12185	COG0765	amino acid transport
FX998_12190	COG1126	abc transporter atp-binding protein
FX998_12235	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FX998_12255	COG0551	DNA topoisomerase type I activity
FX998_12265	COG0758	DNA mediated transformation
FX998_12285	COG0569	domain protein
FX998_12295	COG3036	rescue of stalled ribosome
FX998_12300	COG0789	Transcriptional regulator
FX998_12330	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FX998_12340	COG0201	protein transport
FX998_12430	COG0089	rRNA binding
FX998_12455	COG3409	Peptidoglycan-binding domain 1 protein
FX998_12455	COG3267	Type II secretory pathway component ExeA
FX998_12460	COG3031	protein transport across the cell outer membrane
FX998_12465	COG1450	Type ii and iii secretion system protein
FX998_12470	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FX998_12475	COG1459	type II secretion system
FX998_12480	COG2165	general secretion pathway protein
FX998_12485	COG2165	general secretion pathway protein
FX998_12490	COG2165	general secretion pathway protein
FX998_12495	COG4795	General secretion pathway protein
FX998_12500	COG3156	type II secretion system protein K
FX998_12505	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FX998_12510	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FX998_12515	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FX998_12520	COG2193	ferroxidase activity
FX998_12525	COG2906	2 iron, 2 sulfur cluster binding
FX998_12530	COG3979	chitinase
FX998_12570	COG2964	Protein conserved in bacteria
FX998_12575	COG0545	Peptidyl-prolyl cis-trans isomerase
FX998_12585	COG1047	Peptidyl-prolyl cis-trans
FX998_12590	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FX998_12605	COG0488	(ABC) transporter
FX998_12610	COG0429	hydrolase of the alpha beta-hydrolase fold
FX998_12620	COG3954	Phosphoribulokinase
FX998_12625	COG1765	OsmC-like protein
FX998_12630	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FX998_12635	COG1289	transmembrane transporter activity
FX998_12640	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FX998_12645	COG0512	Glutamine amidotransferase of anthranilate synthase
FX998_12650	COG2184	nucleotidyltransferase activity
FX998_12660	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FX998_12670	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FX998_12675	COG2146	nitrite reductase [NAD(P)H] activity
FX998_12680	COG2116	formate transmembrane transporter activity
FX998_12695	COG0531	amino acid
FX998_12700	COG2222	sugar isomerase
FX998_12705	COG1082	Xylose isomerase domain protein TIM barrel
FX998_12710	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_12715	COG2188	Transcriptional regulator
FX998_12720	COG0626	cystathionine gamma-synthase activity
FX998_12735	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FX998_12740	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FX998_12745	COG3457	Alanine racemase
FX998_12755	COG2188	Transcriptional regulator
FX998_12765	COG0180	Tryptophanyl-tRNA synthetase
FX998_12770	COG0546	phosphoglycolate phosphatase activity
FX998_12775	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FX998_12780	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FX998_12785	COG3266	domain, Protein
FX998_12800	COG4796	Type ii and iii secretion system protein
FX998_12815	COG3166	PFAM Fimbrial assembly family protein
FX998_12820	COG4972	Pilus assembly protein
FX998_12825	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FX998_12830	COG0494	nUDIX hydrolase
FX998_12840	COG1011	Hydrolase
FX998_12845	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FX998_12855	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FX998_12865	COG2205	protein histidine kinase activity
FX998_12870	COG0745	RESPONSE REGULATOR receiver
FX998_12875	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FX998_12880	COG2183	response to ionizing radiation
FX998_12885	COG1918	ferrous iron import across plasma membrane
FX998_12890	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FX998_12900	COG5464	transposase or invertase
FX998_12910	COG1040	competence protein
FX998_12920	COG2610	gluconate transmembrane transporter activity
FX998_12925	COG1640	4-alpha-glucanotransferase
FX998_12930	COG0058	SHG alpha-glucan phosphorylase activity
FX998_12945	COG1690	Belongs to the RtcB family
FX998_12950	COG4650	regulator
FX998_12955	COG1349	DNA-binding transcription factor activity
FX998_12970	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FX998_12980	COG0058	SHG alpha-glucan phosphorylase activity
FX998_13005	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FX998_13010	COG2095	MarC family integral membrane protein
FX998_13015	COG2610	gluconate transmembrane transporter activity
FX998_13020	COG3265	gluconokinase activity
FX998_13025	COG1609	Transcriptional regulator
FX998_13030	COG1741	Belongs to the pirin family
FX998_13035	COG0673	inositol 2-dehydrogenase activity
FX998_13040	COG1247	-acetyltransferase
FX998_13045	COG3157	Type VI secretion system effector, Hcp
FX998_13065	COG0405	Gamma-glutamyltransferase
FX998_13075	COG0584	glycerophosphoryl diester phosphodiesterase
FX998_13080	COG3842	ATPase activity
FX998_13085	COG0395	ABC-type sugar transport system, permease component
FX998_13090	COG1175	transmembrane transport
FX998_13095	COG1653	transport
FX998_13100	COG0410	ABC transporter
FX998_13105	COG0411	ABC transporter
FX998_13110	COG4177	L-phenylalanine transmembrane transporter activity
FX998_13115	COG0559	Belongs to the binding-protein-dependent transport system permease family
FX998_13120	COG0683	leucine binding
FX998_13125	COG0456	acetyltransferase
FX998_13130	COG0683	leucine binding
FX998_13135	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FX998_13140	COG2177	Part of the ABC transporter FtsEX involved in
FX998_13145	COG2884	Cell division ATP-binding protein ftsE
FX998_13150	COG0552	protein localization to endoplasmic reticulum
FX998_13155	COG0742	ribosomal rna small subunit methyltransferase
FX998_13160	COG3776	membrane
FX998_13170	COG3714	YhhN family
FX998_13175	COG2217	Heavy metal translocating P-type atpase
FX998_13185	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FX998_13195	COG0477	Major facilitator Superfamily
FX998_13200	COG0628	permease
FX998_13205	COG2091	lysine biosynthetic process via aminoadipic acid
FX998_13210	COG0747	negative chemotaxis
FX998_13215	COG0601	transmembrane transport
FX998_13220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FX998_13225	COG0444	Belongs to the ABC transporter superfamily
FX998_13230	COG1124	(ABC) transporter
FX998_13255	COG5433	transposase activity
FX998_13260	COG0842	Transport permease protein
FX998_13265	COG1129	ABC transporter
FX998_13265	COG0842	Transport permease protein
FX998_13270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FX998_13290	COG2081	HI0933 family
FX998_13295	COG0306	phosphate transporter
FX998_13305	COG0589	response to stress
FX998_13310	COG3104	oligopeptide transport
FX998_13315	COG0742	ribosomal rna small subunit methyltransferase
FX998_13320	COG0339	signal peptide processing
FX998_13325	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FX998_13330	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FX998_13340	COG0640	Transcriptional regulator
FX998_13345	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FX998_13350	COG1393	Belongs to the ArsC family
FX998_13360	COG3065	identical protein binding
FX998_13365	COG2197	response regulator
FX998_13370	COG1285	pathogenesis
FX998_13385	COG3247	response to pH
FX998_13390	COG2771	luxR family
FX998_13400	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FX998_13405	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FX998_13410	COG2207	Transcriptional regulator
FX998_13415	COG2207	Transcriptional regulator
FX998_13420	COG0076	glutamate decarboxylase activity
FX998_13425	COG1858	cytochrome C peroxidase
FX998_13430	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FX998_13435	COG2197	response regulator
FX998_13440	COG0583	DNA-binding transcription factor activity
FX998_13445	COG1295	ribonuclease BN
FX998_13450	COG0477	Major facilitator Superfamily
FX998_13455	COG2982	Protein involved in outer membrane biogenesis
FX998_13460	COG2200	EAL domain
FX998_13465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_13470	COG0612	Peptidase, M16
FX998_13480	COG2199	diguanylate cyclase activity
FX998_13480	COG2200	EAL domain
FX998_13485	COG0457	Tetratricopeptide repeat
FX998_13485	COG3118	belongs to the thioredoxin family
FX998_13490	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FX998_13495	COG1215	transferase activity, transferring glycosyl groups
FX998_13500	COG1215	transferase activity, transferring glycosyl groups
FX998_13525	COG2194	sulfuric ester hydrolase activity
FX998_13540	COG0814	amino acid
FX998_13545	COG4608	Belongs to the ABC transporter superfamily
FX998_13550	COG0444	Belongs to the ABC transporter superfamily
FX998_13555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FX998_13560	COG0601	transmembrane transport
FX998_13570	COG0747	negative chemotaxis
FX998_13580	COG2194	sulfuric ester hydrolase activity
FX998_13585	COG2223	nitrite transmembrane transporter activity
FX998_13590	COG5571	outer membrane autotransporter
FX998_13595	COG2818	Glycosylase
FX998_13600	COG0456	acetyltransferase
FX998_13605	COG0243	molybdopterin cofactor binding
FX998_13610	COG2885	chlorophyll binding
FX998_13625	COG2944	sequence-specific DNA binding
FX998_13630	COG1278	Cold shock
FX998_13640	COG2801	Transposase and inactivated derivatives
FX998_13660	COG3274	enterobacterial common antigen metabolic process
FX998_13665	COG4682	membrane
FX998_13670	COG4682	membrane
FX998_13675	COG1070	Carbohydrate kinase
FX998_13685	COG4213	ABC transporter substrate-binding protein
FX998_13690	COG1129	ABC transporter
FX998_13695	COG4214	carbohydrate transport
FX998_13700	COG1609	Transcriptional regulator
FX998_13700	COG2207	Transcriptional regulator
FX998_13705	COG2992	FlgJ-related protein
FX998_13710	COG0366	Alpha amylase catalytic
FX998_13715	COG3977	Valine--pyruvate aminotransferase
FX998_13720	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FX998_13725	COG1414	Transcriptional regulator
FX998_13735	COG2731	YhcH YjgK YiaL family protein
FX998_13740	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FX998_13745	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FX998_13750	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FX998_13755	COG1070	Carbohydrate kinase
FX998_13760	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FX998_13765	COG3623	hexulose-6-phosphate isomerase
FX998_13770	COG0235	Class ii aldolase
FX998_13780	COG3713	MltA-interacting MipA family protein
FX998_13785	COG0583	DNA-binding transcription factor activity
FX998_13790	COG1566	PFAM secretion protein HlyD family protein
FX998_13805	COG1012	belongs to the aldehyde dehydrogenase family
FX998_13810	COG1454	alcohol dehydrogenase
FX998_13815	COG3276	selenocysteine insertion sequence binding
FX998_13825	COG0625	glutathione transferase activity
FX998_13830	COG3209	COG3209 Rhs family protein
FX998_13855	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FX998_13875	COG1566	PFAM secretion protein HlyD family protein
FX998_13885	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_13885	COG2213	PTS system mannitol-specific
FX998_13895	COG3722	fumarate hydratase activity
FX998_13910	COG1620	l-lactate permease
FX998_13915	COG2186	Transcriptional regulator
FX998_13925	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FX998_13930	COG1045	serine acetyltransferase
FX998_13945	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FX998_13950	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FX998_13960	COG4942	peptidase
FX998_13965	COG2861	carbohydrate metabolic process
FX998_13970	COG1216	Glycosyl transferase, family 2
FX998_13980	COG0156	8-amino-7-oxononanoate synthase activity
FX998_13990	COG0859	PFAM glycosyl transferase family 9
FX998_13995	COG0859	PFAM glycosyl transferase family 9
FX998_14015	COG3642	lipopolysaccharide core region biosynthetic process
FX998_14020	COG1442	glycosyl transferase family 8
FX998_14025	COG1442	glycosyl transferase family 8
FX998_14030	COG0438	transferase activity, transferring glycosyl groups
FX998_14035	COG1442	glycosyl transferase family 8
FX998_14040	COG0515	serine threonine protein kinase
FX998_14045	COG0438	transferase activity, transferring glycosyl groups
FX998_14050	COG0859	PFAM glycosyl transferase family 9
FX998_14055	COG1519	Transferase
FX998_14085	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FX998_14110	COG1561	YicC-like family, N-terminal region
FX998_14120	COG3645	SOS response
FX998_14125	COG2860	membrane
FX998_14145	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FX998_14150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FX998_14155	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FX998_14160	COG0786	glutamate:sodium symporter activity
FX998_14165	COG2233	PERMEase
FX998_14170	COG2982	Protein involved in outer membrane biogenesis
FX998_14175	COG1501	Belongs to the glycosyl hydrolase 31 family
FX998_14180	COG2211	Major facilitator Superfamily
FX998_14195	COG2814	Major facilitator Superfamily
FX998_14200	COG0697	spore germination
FX998_14205	COG1464	Belongs to the NlpA lipoprotein family
FX998_14225	COG2252	PERMEase
FX998_14235	COG2271	Major facilitator Superfamily
FX998_14240	COG2271	Major facilitator Superfamily
FX998_14245	COG3851	Histidine kinase
FX998_14250	COG2197	response regulator
FX998_14255	COG0440	acetolactate synthase activity
FX998_14260	COG0028	Belongs to the TPP enzyme family
FX998_14280	COG2814	Major facilitator Superfamily
FX998_14285	COG0641	radical SAM
FX998_14295	COG2149	membrane
FX998_14305	COG3119	arylsulfatase activity
FX998_14310	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FX998_14315	COG2207	Transcriptional regulator
FX998_14330	COG2188	Transcriptional regulator
FX998_14350	COG5645	(Lipo)protein
FX998_14355	COG0823	Involved in the tonB-independent uptake of proteins
FX998_14360	COG0644	oxidoreductase
FX998_14365	COG2271	Major facilitator Superfamily
FX998_14375	COG0800	Aldolase
FX998_14380	COG3734	2-keto-3-deoxy-galactonokinase
FX998_14385	COG2186	Transcriptional regulator
FX998_14395	COG0561	phosphatase activity
FX998_14400	COG3753	Protein conserved in bacteria
FX998_14405	COG0187	DNA topoisomerase II activity
FX998_14415	COG0592	DNA-directed DNA polymerase activity
FX998_14465	COG0814	amino acid
FX998_14480	COG2091	lysine biosynthetic process via aminoadipic acid
FX998_14485	COG0431	NADPH-dependent FMN reductase
FX998_14490	COG2252	PERMEase
FX998_14495	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FX998_14510	COG4372	Transposase
FX998_14515	COG3436	PFAM IS66 Orf2 family protein
FX998_14525	COG3196	Protein conserved in bacteria
FX998_14530	COG0363	glucosamine-6-phosphate deaminase activity
FX998_14535	COG2382	esterase
FX998_14545	COG2723	6-phospho-beta-galactosidase activity
FX998_14550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_14550	COG2190	(PTS) system
FX998_14550	COG1263	PTS System
FX998_14555	COG3711	transcriptional antiterminator
FX998_14560	COG0704	Plays a role in the regulation of phosphate uptake
FX998_14565	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FX998_14570	COG0581	inorganic phosphate transmembrane transporter activity
FX998_14575	COG0573	inorganic phosphate transmembrane transporter activity
FX998_14580	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FX998_14585	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FX998_14635	COG3312	ion transport
FX998_14650	COG0716	FMN binding
FX998_14655	COG1522	sequence-specific DNA binding
FX998_14665	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FX998_14680	COG1869	D-ribose catabolic process
FX998_14690	COG1172	Belongs to the binding-protein-dependent transport system permease family
FX998_14695	COG1879	ABC-type sugar transport system periplasmic component
FX998_14700	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_14705	COG1609	Transcriptional regulator
FX998_14710	COG0477	Major facilitator Superfamily
FX998_14715	COG2186	Transcriptional regulator
FX998_14755	COG3085	chromosome segregation
FX998_14760	COG0606	chelatase, subunit chli
FX998_14780	COG3978	acetolactate synthase activity
FX998_14785	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FX998_14795	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FX998_14800	COG0583	DNA-binding transcription factor activity
FX998_14810	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FX998_14820	COG0210	DNA helicase
FX998_14825	COG0248	Ppx GppA phosphatase
FX998_14835	COG3118	belongs to the thioredoxin family
FX998_14845	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FX998_14850	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FX998_14855	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FX998_14860	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FX998_14865	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FX998_14870	COG1088	dTDP-glucose 4,6-dehydratase activity
FX998_14875	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FX998_14880	COG0456	acetyltransferase
FX998_14885	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FX998_14890	COG2244	polysaccharide biosynthetic process
FX998_14910	COG1113	amino acid transport
FX998_14935	COG0641	radical SAM
FX998_14940	COG3119	arylsulfatase activity
FX998_14945	COG3071	HemY protein
FX998_14950	COG2959	enzyme of heme biosynthesis
FX998_14955	COG1587	Uroporphyrinogen-III synthase
FX998_14965	COG3072	Adenylate cyclase
FX998_14980	COG5567	small periplasmic lipoprotein
FX998_14990	COG3159	Protein conserved in bacteria
FX998_15000	COG1011	Hydrolase
FX998_15005	COG0210	DNA helicase
FX998_15010	COG3698	Phosphodiester glycosidase
FX998_15015	COG0598	Magnesium transport protein CorA
FX998_15030	COG2962	Rard protein
FX998_15035	COG2050	protein possibly involved in aromatic compounds catabolism
FX998_15040	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
FX998_15045	COG0514	ATP-dependent DNA helicase (RecQ)
FX998_15050	COG1280	lysine exporter protein (LysE YggA)
FX998_15055	COG1280	lysine exporter protein (LysE YggA)
FX998_15060	COG2267	carboxylic ester hydrolase activity
FX998_15065	COG0561	phosphatase activity
FX998_15075	COG0583	DNA-binding transcription factor activity
FX998_15085	COG0412	Dienelactone hydrolase
FX998_15090	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FX998_15095	COG1322	Protein conserved in bacteria
FX998_15105	COG3165	ubiquinone biosynthetic process from chorismate
FX998_15115	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FX998_15120	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FX998_15125	COG0805	protein transport
FX998_15130	COG0084	hydrolase, TatD family'
FX998_15135	COG0250	Participates in transcription elongation, termination and antitermination
FX998_15140	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FX998_15145	COG0543	2 iron, 2 sulfur cluster binding
FX998_15150	COG0183	Belongs to the thiolase family
FX998_15165	COG1739	Uncharacterized protein family UPF0029
FX998_15170	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FX998_15175	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FX998_15210	COG1763	Mo-molybdopterin cofactor biosynthetic process
FX998_15215	COG0746	molybdenum cofactor guanylyltransferase activity
FX998_15220	COG3084	Protein conserved in bacteria
FX998_15225	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FX998_15230	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FX998_15235	COG5339	Protein conserved in bacteria
FX998_15240	COG0204	Acyl-transferase
FX998_15250	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FX998_15250	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FX998_15265	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FX998_15275	COG2204	response regulator
FX998_15280	COG3852	Histidine kinase
FX998_15285	COG0174	glutamine synthetase
FX998_15295	COG2188	Transcriptional regulator
FX998_15300	COG1082	Xylose isomerase domain protein TIM barrel
FX998_15305	COG2271	Major facilitator Superfamily
FX998_15310	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FX998_15315	COG2211	Major facilitator Superfamily
FX998_15320	COG2211	Major facilitator Superfamily
FX998_15325	COG1501	Belongs to the glycosyl hydrolase 31 family
FX998_15330	COG2017	converts alpha-aldose to the beta-anomer
FX998_15335	COG2942	2-epimerase
FX998_15340	COG3684	Belongs to the aldolase LacD family
FX998_15345	COG2084	Dehydrogenase
FX998_15350	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_15355	COG1349	DNA-binding transcription factor activity
FX998_15360	COG1011	Hydrolase
FX998_15375	COG0456	acetyltransferase
FX998_15380	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FX998_15385	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FX998_15395	COG2864	formate dehydrogenase
FX998_15400	COG0437	4 iron, 4 sulfur cluster binding
FX998_15420	COG3711	transcriptional antiterminator
FX998_15420	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_15425	COG1363	Peptidase, m42
FX998_15430	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_15430	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_15435	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_15475	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FX998_15485	COG2258	MOSC domain
FX998_15490	COG2205	protein histidine kinase activity
FX998_15495	COG0745	RESPONSE REGULATOR receiver
FX998_15500	COG3678	ATP-independent chaperone mediated protein folding
FX998_15505	COG4974	Belongs to the 'phage' integrase family
FX998_15575	COG3436	PFAM IS66 Orf2 family protein
FX998_15580	COG4372	Transposase
FX998_15585	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FX998_15650	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FX998_15670	COG3152	Membrane
FX998_15675	COG3691	Protein conserved in bacteria
FX998_15680	COG0589	response to stress
FX998_15685	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FX998_15690	COG1494	fructose-1,6-bisphosphatase
FX998_15700	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FX998_15715	COG1575	Belongs to the MenA family. Type 1 subfamily
FX998_15720	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FX998_15730	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FX998_15735	COG1609	Transcriptional regulator
FX998_15740	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FX998_15750	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FX998_15760	COG0626	cystathionine gamma-synthase activity
FX998_15765	COG0527	aspartate kinase activity
FX998_15765	COG0460	homoserine dehydrogenase
FX998_15770	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FX998_15780	COG0697	spore germination
FX998_15785	COG3738	Protein conserved in bacteria
FX998_15790	COG0371	Dehydrogenase
FX998_15795	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FX998_15800	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_15800	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_15800	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FX998_15805	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_15810	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_15820	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FX998_15825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_15830	COG2207	Transcriptional regulator
FX998_15835	COG2194	sulfuric ester hydrolase activity
FX998_15850	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FX998_15855	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FX998_15865	COG0583	DNA-binding transcription factor activity
FX998_15875	COG1309	transcriptional regulator
FX998_15890	COG4206	TonB-dependent receptor
FX998_15925	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FX998_15930	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FX998_15930	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FX998_15965	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FX998_15970	COG0250	Participates in transcription elongation, termination and antitermination
FX998_16010	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FX998_16020	COG2104	thiamine diphosphate biosynthetic process
FX998_16025	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FX998_16060	COG3068	Protein conserved in bacteria
FX998_16065	COG0776	regulation of translation
FX998_16075	COG3678	ATP-independent chaperone mediated protein folding
FX998_16080	COG4191	Histidine kinase
FX998_16085	COG2204	response regulator
FX998_16090	COG0151	Belongs to the GarS family
FX998_16125	COG0456	acetyltransferase
FX998_16135	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FX998_16140	COG2224	Isocitrate lyase
FX998_16155	COG1414	Transcriptional regulator
FX998_16160	COG0646	methionine synthase
FX998_16160	COG1410	methionine synthase
FX998_16165	COG1283	sodium-dependent phosphate transmembrane transporter activity
FX998_16175	COG1187	pseudouridine synthase activity
FX998_16185	COG0527	aspartate kinase activity
FX998_16210	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FX998_16225	COG0477	Major facilitator Superfamily
FX998_16225	COG2814	Major facilitator Superfamily
FX998_16230	COG3833	ABC-type maltose transport systems, permease component
FX998_16235	COG1175	transmembrane transport
FX998_16240	COG2182	Extracellular solute-binding protein
FX998_16245	COG3842	ATPase activity
FX998_16280	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FX998_16290	COG0534	Mate efflux family protein
FX998_16295	COG3237	CsbD-like
FX998_16300	COG0735	belongs to the Fur family
FX998_16315	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FX998_16325	COG0604	alcohol dehydrogenase
FX998_16330	COG0305	Participates in initiation and elongation during chromosome replication
FX998_16335	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FX998_16340	COG1448	Aminotransferase
FX998_16350	COG3700	Belongs to the class B bacterial acid phosphatase family
FX998_16355	COG0432	Pfam Uncharacterised protein family UPF0047
FX998_16360	COG2315	Protein conserved in bacteria
FX998_16365	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FX998_16370	COG0629	single-stranded DNA binding
FX998_16415	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FX998_16420	COG2207	Transcriptional regulator
FX998_16425	COG0789	Transcriptional regulator
FX998_16430	COG2252	PERMEase
FX998_16435	COG0025	NhaP-type Na H and K H
FX998_16440	COG1357	PFAM Pentapeptide repeats (8 copies)
FX998_16450	COG3162	membrane
FX998_16455	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FX998_16465	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FX998_16470	COG0437	4 iron, 4 sulfur cluster binding
FX998_16475	COG3301	Polysulphide reductase, NrfD
FX998_16480	COG1138	Cytochrome C-type biogenesis protein
FX998_16485	COG3088	subunit of a heme lyase
FX998_16490	COG4235	cytochrome complex assembly
FX998_16495	COG1301	dicarboxylic acid transport
FX998_16500	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FX998_16510	COG1538	Outer membrane efflux protein
FX998_16515	COG1289	transmembrane transporter activity
FX998_16520	COG1566	PFAM secretion protein HlyD family protein
FX998_16530	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FX998_16535	COG1940	carbohydrate kinase activity
FX998_16540	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FX998_16545	COG1172	Belongs to the binding-protein-dependent transport system permease family
FX998_16550	COG1129	ABC transporter
FX998_16555	COG1879	ABC-type sugar transport system periplasmic component
FX998_16560	COG1737	Transcriptional regulator
FX998_16565	COG0698	ribose 5-phosphate isomerase
FX998_16575	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FX998_16580	COG0456	acetyltransferase
FX998_16585	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FX998_16590	COG3454	Phosphonate metabolism
FX998_16595	COG4778	phosphonate C-P lyase system protein PhnL
FX998_16600	COG4107	phosphonate C-P lyase system protein PhnK
FX998_16605	COG3627	carbon phosphorus lyase activity
FX998_16610	COG3626	phosphonate metabolism
FX998_16615	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FX998_16620	COG3624	Phosphonate C-P lyase system protein PhnG
FX998_16625	COG2188	Transcriptional regulator
FX998_16635	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FX998_16640	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FX998_16645	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FX998_16650	COG2824	Alkylphosphonate utilization operon protein PhnA
FX998_16665	COG0477	Major facilitator Superfamily
FX998_16675	COG0642	Histidine kinase
FX998_16680	COG0745	RESPONSE REGULATOR receiver
FX998_16685	COG2194	sulfuric ester hydrolase activity
FX998_16690	COG0531	amino acid
FX998_16695	COG2207	Transcriptional regulator
FX998_16700	COG1982	Orn Lys Arg decarboxylase major
FX998_16705	COG2169	Transcriptional regulator
FX998_16710	COG1486	melibiose metabolic process
FX998_16715	COG2211	Major facilitator Superfamily
FX998_16720	COG3647	Membrane
FX998_16725	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FX998_16725	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FX998_16730	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FX998_16735	COG4565	transcriptional regulatory protein
FX998_16740	COG3290	protein histidine kinase activity
FX998_16745	COG3592	Divergent 4Fe-4S mono-cluster
FX998_16750	COG2388	GCN5-related N-acetyl-transferase
FX998_16765	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FX998_16770	COG3104	oligopeptide transport
FX998_16775	COG1982	Orn Lys Arg decarboxylase major
FX998_16780	COG0531	amino acid
FX998_16785	COG3710	Transcriptional regulator
FX998_16795	COG1309	transcriptional regulator
FX998_16800	COG4232	protein-disulfide reductase activity
FX998_16810	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FX998_16815	COG1027	Aspartate ammonia-lyase
FX998_16820	COG3030	protein affecting phage T7 exclusion by the F plasmid
FX998_16825	COG0531	amino acid
FX998_16850	COG1509	lysine 2,3-aminomutase activity
FX998_16860	COG5510	response to toxic substance
FX998_16865	COG5510	response to toxic substance
FX998_16870	COG2076	Multidrug Resistance protein
FX998_16875	COG3040	lipid binding
FX998_16880	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FX998_16895	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FX998_16900	COG1053	succinate dehydrogenase
FX998_16910	COG0531	amino acid
FX998_16925	COG1511	domain protein
FX998_16925	COG3264	Mechanosensitive ion channel
FX998_16965	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FX998_16970	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FX998_16970	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FX998_16975	COG0802	atpase or kinase
FX998_16980	COG0860	N-Acetylmuramoyl-L-alanine amidase
FX998_17000	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FX998_17005	COG0330	HflC and HflK could
FX998_17010	COG0330	HflC and HflK could
FX998_17015	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FX998_17030	COG0557	exoribonuclease II activity
FX998_17040	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FX998_17045	COG1414	Transcriptional regulator
FX998_17050	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FX998_17055	COG2271	Major facilitator Superfamily
FX998_17060	COG2721	sulfolactate sulfo-lyase activity
FX998_17080	COG3766	membrane
FX998_17085	COG5463	Belongs to the UPF0441 family
FX998_17090	COG0754	glutathionylspermidine amidase activity
FX998_17095	COG1960	acyl-CoA dehydrogenase activity
FX998_17105	COG3650	response to hydrogen peroxide
FX998_17110	COG1073	alpha beta
FX998_17130	COG3414	Phosphotransferase system galactitol-specific IIB component
FX998_17135	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_17150	COG0235	Class ii aldolase
FX998_17155	COG3477	response to acidic pH
FX998_17195	COG1943	Transposase
FX998_17200	COG0675	Transposase, IS605 OrfB family
FX998_17210	COG3061	Opacity-associated protein A
FX998_17220	COG0545	Peptidyl-prolyl cis-trans isomerase
FX998_17225	COG1113	amino acid transport
FX998_17235	COG0697	spore germination
FX998_17240	COG0702	epimerase
FX998_17245	COG1733	regulation of RNA biosynthetic process
FX998_17250	COG0737	Belongs to the 5'-nucleotidase family
FX998_17255	COG1218	3'(2'),5'-bisphosphate nucleotidase
FX998_17265	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FX998_17275	COG1253	flavin adenine dinucleotide binding
FX998_17285	COG0729	surface antigen
FX998_17290	COG2911	Protein conserved in bacteria
FX998_17295	COG2105	PFAM AIG2 family protein
FX998_17300	COG2336	PFAM SpoVT AbrB
FX998_17305	COG2337	Toxic component of a toxin-antitoxin (TA) module
FX998_17310	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FX998_17315	COG1879	ABC-type sugar transport system periplasmic component
FX998_17320	COG1129	ABC transporter
FX998_17325	COG1172	Belongs to the binding-protein-dependent transport system permease family
FX998_17330	COG1172	Belongs to the binding-protein-dependent transport system permease family
FX998_17340	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FX998_17350	COG0312	modulator of DNA gyrase
FX998_17355	COG3783	Cytochrome b(562)
FX998_17360	COG0602	queuosine metabolic process
FX998_17365	COG1328	CTP reductase activity
FX998_17370	COG0366	Alpha amylase catalytic
FX998_17375	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_17375	COG1263	PTS System
FX998_17380	COG1609	Transcriptional regulator
FX998_17390	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FX998_17395	COG0251	oxidation-reduction process
FX998_17415	COG0251	oxidation-reduction process
FX998_17420	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_17425	COG1309	transcriptional regulator
FX998_17430	COG2731	YhcH YjgK YiaL family protein
FX998_17455	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
FX998_17460	COG0456	acetyltransferase
FX998_17470	COG0525	valine-tRNA ligase activity
FX998_17475	COG2927	DNA polymerase III (CHI subunit)
FX998_17485	COG0795	lipopolysaccharide-transporting ATPase activity
FX998_17490	COG0795	lipopolysaccharide-transporting ATPase activity
FX998_17495	COG0433	COG0433 Predicted ATPase
FX998_17500	COG1064	alcohol dehydrogenase
FX998_17510	COG0582	viral genome integration into host DNA
FX998_17590	COG3344	reverse transcriptase
FX998_17610	COG1309	transcriptional regulator
FX998_17620	COG4325	translation initiation factor activity
FX998_17630	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FX998_17645	COG2990	Protein conserved in bacteria
FX998_17650	COG0297	glycogen (starch) synthase activity
FX998_17655	COG0726	polysaccharide deacetylase
FX998_17670	COG3344	reverse transcriptase
FX998_17680	COG2085	NADP oxidoreductase coenzyme F420-dependent
FX998_17685	COG1120	ATPase activity
FX998_17690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FX998_17695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FX998_17700	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FX998_17705	COG4772	TonB-dependent receptor
FX998_17710	COG3712	iron ion homeostasis
FX998_17715	COG1595	DNA-templated transcription, initiation
FX998_17755	COG4372	Transposase
FX998_17760	COG3436	PFAM IS66 Orf2 family protein
FX998_17790	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FX998_17810	COG2610	gluconate transmembrane transporter activity
FX998_17820	COG0246	Mannitol dehydrogenase
FX998_17825	COG2186	Transcriptional regulator
FX998_17845	COG0583	DNA-binding transcription factor activity
FX998_17850	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FX998_17855	COG0700	Nucleoside recognition
FX998_17860	COG3366	ferrous iron transmembrane transporter activity
FX998_17870	COG0477	Major facilitator Superfamily
FX998_17885	COG1924	4 iron, 4 sulfur cluster binding
FX998_17890	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
FX998_17895	COG2733	membrane
FX998_17900	COG2814	Major facilitator Superfamily
FX998_17920	COG0523	cobalamin synthesis protein
FX998_17925	COG2879	small protein
FX998_17930	COG1966	Carbon starvation protein
FX998_17935	COG0840	transmembrane signaling receptor activity
FX998_17940	COG2271	Major facilitator Superfamily
FX998_17945	COG1802	Transcriptional regulator
FX998_17950	COG1063	alcohol dehydrogenase
FX998_17965	COG1484	DNA-dependent DNA replication
FX998_17980	COG2966	Psort location CytoplasmicMembrane, score
FX998_17985	COG2197	response regulator
FX998_17990	COG2197	response regulator
FX998_17995	COG4114	ferric iron reductase
FX998_18015	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
FX998_18020	COG0456	acetyltransferase
FX998_18025	COG1011	Hydrolase
FX998_18035	COG2823	Periplasmic or secreted lipoprotein
FX998_18045	COG4667	esterase of the alpha-beta hydrolase superfamily
FX998_18050	COG0084	hydrolase, TatD family'
FX998_18055	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FX998_18060	COG1328	CTP reductase activity
FX998_18095	COG0560	Phosphoserine phosphatase
FX998_18100	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FX998_18105	COG1056	cytidyltransferase-related domain
FX998_18105	COG3172	ATPase kinase involved in NAD metabolism
FX998_18110	COG0488	(ABC) transporter
FX998_18115	COG0741	lytic transglycosylase activity
FX998_18135	COG2207	Transcriptional regulator
FX998_18135	COG3708	Transcriptional regulator
FX998_18140	COG3045	CreA protein
FX998_18145	COG0745	RESPONSE REGULATOR receiver
FX998_18150	COG2205	protein histidine kinase activity
FX998_18155	COG4452	Inner membrane protein CreD
FX998_18160	COG0745	RESPONSE REGULATOR receiver
FX998_18170	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FX998_18180	COG0527	aspartate kinase activity
FX998_18180	COG0460	homoserine dehydrogenase
FX998_18190	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FX998_18200	COG3022	response to hydroperoxide
FX998_18205	COG1115	amino acid carrier protein
FX998_18215	COG0521	Mo-molybdopterin cofactor biosynthetic process
FX998_18220	COG1584	GPR1 FUN34 yaaH family protein
FX998_18225	COG4735	regulation of single-species biofilm formation
FX998_18245	COG3385	transposase activity
FX998_18255	COG2801	Transposase and inactivated derivatives
FX998_18265	COG0583	DNA-binding transcription factor activity
FX998_18295	COG0196	riboflavin kinase activity
FX998_18310	COG1047	Peptidyl-prolyl cis-trans
FX998_18330	COG0505	Belongs to the CarA family
FX998_18335	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FX998_18385	COG0644	oxidoreductase
FX998_18390	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FX998_18395	COG2271	Major facilitator Superfamily
FX998_18410	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FX998_18435	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FX998_18440	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FX998_18445	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FX998_18460	COG0564	pseudouridine synthase activity
FX998_18470	COG0417	DNA replication proofreading
FX998_18475	COG0235	Class ii aldolase
FX998_18480	COG2160	L-arabinose isomerase activity
FX998_18485	COG1069	ribulokinase activity
FX998_18490	COG4977	sequence-specific DNA binding
FX998_18495	COG0586	Pfam SNARE associated Golgi protein
FX998_18500	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FX998_18505	COG1178	ABC-type Fe3 transport system permease component
FX998_18510	COG4143	(ABC) transporter
FX998_18515	COG4533	DNA binding
FX998_18525	COG2814	Major facilitator Superfamily
FX998_18540	COG0473	3-isopropylmalate dehydrogenase activity
FX998_18555	COG0583	DNA-binding transcription factor activity
FX998_18565	COG0028	Belongs to the TPP enzyme family
FX998_18570	COG0440	acetolactate synthase activity
FX998_18580	COG1609	Transcriptional regulator
FX998_18585	COG2001	Belongs to the MraZ family
FX998_18595	COG3116	cell division
FX998_18600	COG0768	penicillin binding
FX998_18605	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FX998_18610	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FX998_18625	COG0772	Belongs to the SEDS family
FX998_18640	COG1181	Belongs to the D-alanine--D-alanine ligase family
FX998_18645	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FX998_18650	COG0849	cell division
FX998_18655	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FX998_18675	COG0494	nUDIX hydrolase
FX998_18690	COG0237	dephospho-CoA kinase activity
FX998_18700	COG1459	type II secretion system
FX998_18705	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FX998_18710	COG4969	Belongs to the N-Me-Phe pilin family
FX998_18715	COG0157	Belongs to the NadC ModD family
FX998_18720	COG3023	N-Acetylmuramoyl-L-alanine amidase
FX998_18725	COG3725	Membrane protein required for beta-lactamase induction
FX998_18730	COG1113	amino acid transport
FX998_18735	COG2186	Transcriptional regulator
FX998_18740	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FX998_18745	COG0508	dehydrogenase complex catalyzes the overall conversion of
FX998_18750	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FX998_18755	COG3064	Membrane
FX998_18760	COG1049	propionate catabolic process, 2-methylcitrate cycle
FX998_18785	COG2132	Multicopper oxidase
FX998_18790	COG4993	Dehydrogenase
FX998_18795	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FX998_18800	COG0288	reversible hydration of carbon dioxide
FX998_18805	COG1131	(ABC) transporter
FX998_18810	COG0842	Transport permease protein
FX998_18815	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_18820	COG0726	polysaccharide deacetylase
FX998_18830	COG5464	transposase or invertase
FX998_18865	COG3539	Fimbrial protein
FX998_18870	COG3539	Fimbrial protein
FX998_18875	COG3539	Fimbrial protein
FX998_18880	COG3188	usher protein
FX998_18885	COG3121	Chaperone
FX998_18890	COG3539	Fimbrial protein
FX998_18895	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FX998_18900	COG0617	tRNA 3'-terminal CCA addition
FX998_18910	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FX998_18920	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FX998_18925	COG1643	Atp-dependent helicase
FX998_18930	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FX998_18935	COG4774	siderophore transport
FX998_18940	COG1120	ATPase activity
FX998_18945	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FX998_18950	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FX998_18975	COG2860	membrane
FX998_18980	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FX998_18995	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FX998_19000	COG3835	regulator
FX998_19015	COG1408	metallophosphoesterase
FX998_19030	COG0024	Methionine aminopeptidase
FX998_19055	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FX998_19060	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FX998_19065	COG0575	Belongs to the CDS family
FX998_19070	COG0750	zinc metalloprotease
FX998_19080	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FX998_19085	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FX998_19110	COG0587	DNA-directed DNA polymerase activity
FX998_19125	COG0346	lactoylglutathione lyase activity
FX998_19130	COG0037	tRNA processing
FX998_19135	COG4568	rho-dependent transcription termination
FX998_19145	COG4681	YaeQ
FX998_19150	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FX998_19155	COG3015	lipoprotein NlpE involved in copper resistance
FX998_19160	COG0791	NLP P60 protein
FX998_19170	COG1720	tRNA m6t6A37 methyltransferase activity
FX998_19180	COG1464	Belongs to the NlpA lipoprotein family
FX998_19185	COG2011	ABC-type metal ion transport system permease component
FX998_19190	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FX998_19195	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FX998_19230	COG0656	L-ascorbic acid biosynthetic process
FX998_19235	COG0583	DNA-binding transcription factor activity
FX998_19245	COG2226	methyltransferase
FX998_19250	COG1388	LysM domain
FX998_19250	COG0741	lytic transglycosylase activity
FX998_19255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FX998_19260	COG2226	methyltransferase
FX998_19270	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FX998_19290	COG4104	PAAR repeat-containing protein
FX998_19295	COG3157	Type VI secretion system effector, Hcp
FX998_19380	COG3501	Rhs element vgr protein
FX998_19385	COG3209	COG3209 Rhs family protein
FX998_19395	COG5433	transposase activity
FX998_19400	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FX998_19410	COG1960	acyl-CoA dehydrogenase activity
FX998_19420	COG0121	glutamine amidotransferase
FX998_19425	COG3034	peptidoglycan biosynthetic process
FX998_19430	COG3041	Addiction module toxin RelE StbE family
FX998_19435	COG3077	Addiction module antitoxin, RelB DinJ family
FX998_19440	COG0791	NLP P60 protein
FX998_19445	COG1943	Transposase
FX998_19465	COG2161	toxin-antitoxin pair type II binding
FX998_19475	COG0454	-acetyltransferase
FX998_19480	COG1690	Belongs to the RtcB family
FX998_19485	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FX998_19490	COG2195	Cleaves the N-terminal amino acid of tripeptides
FX998_19510	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FX998_19535	COG0582	viral genome integration into host DNA
FX998_19555	COG3561	AntA/AntB antirepressor
FX998_19655	COG0583	DNA-binding transcription factor activity
FX998_19660	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FX998_19665	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FX998_19670	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FX998_19675	COG2080	2 iron, 2 sulfur cluster binding
FX998_19680	COG3477	response to acidic pH
FX998_19690	COG3121	Chaperone
FX998_19700	COG3188	usher protein
FX998_19730	COG0254	rRNA binding
FX998_19745	COG1388	LysM domain
FX998_19750	COG3708	Transcriptional regulator
FX998_19750	COG2207	Transcriptional regulator
FX998_19760	COG3059	membrane
FX998_19770	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FX998_19775	COG2207	Transcriptional regulator
FX998_19780	COG0247	lactate metabolic process
FX998_19785	COG1139	Iron-sulfur cluster binding protein
FX998_19790	COG1556	Lactate utilization protein
FX998_19815	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FX998_19825	COG2771	luxR family
FX998_19825	COG2200	EAL domain
FX998_19830	COG0583	DNA-binding transcription factor activity
FX998_19840	COG0666	response to abiotic stimulus
FX998_19850	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FX998_19855	COG1304	FMN binding
FX998_19865	COG0549	Belongs to the carbamate kinase family
FX998_19870	COG0402	S-adenosylhomocysteine deaminase activity
FX998_19875	COG1064	alcohol dehydrogenase
FX998_19890	COG1280	lysine exporter protein (LysE YggA)
FX998_19900	COG3829	transcription factor binding
FX998_19905	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FX998_19910	COG0372	Belongs to the citrate synthase family
FX998_19915	COG2079	MmgE PrpD family protein
FX998_19920	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FX998_19925	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FX998_19930	COG0402	S-adenosylhomocysteine deaminase activity
FX998_19935	COG0583	DNA-binding transcription factor activity
FX998_19940	COG0288	reversible hydration of carbon dioxide
FX998_19950	COG2807	transmembrane transport
FX998_19955	COG0110	maltose O-acetyltransferase activity
FX998_19960	COG2223	nitrite transmembrane transporter activity
FX998_19965	COG3250	beta-galactosidase activity
FX998_19970	COG1609	Transcriptional regulator
FX998_19975	COG1414	Transcriptional regulator
FX998_19985	COG3384	dioxygenase
FX998_19995	COG3971	2-oxopent-4-enoate hydratase activity
FX998_20010	COG2814	Major facilitator Superfamily
FX998_20015	COG3122	Protein conserved in bacteria
FX998_20035	COG3547	Transposase (IS116 IS110 IS902 family)
FX998_20050	COG1215	transferase activity, transferring glycosyl groups
FX998_20055	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FX998_20065	COG4521	taurine ABC transporter
FX998_20070	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FX998_20075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FX998_20080	COG2175	clavaminate synthase activity
FX998_20085	COG0113	porphobilinogen synthase activity
FX998_20090	COG3468	outer membrane autotransporter barrel domain protein
FX998_20095	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FX998_20100	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FX998_20105	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FX998_20125	COG1181	Belongs to the D-alanine--D-alanine ligase family
FX998_20135	COG1785	Belongs to the alkaline phosphatase family
FX998_20145	COG3706	GGDEF domain
FX998_20150	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FX998_20170	COG4126	flavin adenine dinucleotide binding
FX998_20195	COG1940	carbohydrate kinase activity
FX998_20200	COG2814	Major facilitator Superfamily
FX998_20205	COG0419	ATPase involved in DNA repair
FX998_20210	COG0420	3'-5' exonuclease activity
FX998_20215	COG0745	RESPONSE REGULATOR receiver
FX998_20220	COG5002	protein histidine kinase activity
FX998_20225	COG1114	Component of the transport system for branched-chain amino acids
FX998_20230	COG1113	amino acid transport
FX998_20235	COG0366	Alpha amylase catalytic
FX998_20255	COG1862	Preprotein translocase
FX998_20260	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FX998_20265	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FX998_20270	COG1403	HNH endonuclease
FX998_20275	COG3248	Nucleoside-binding outer membrane protein
FX998_20280	COG4238	major outer membrane lipoprotein
FX998_20290	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FX998_20290	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FX998_20305	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FX998_20310	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FX998_20315	COG0667	Aldo Keto reductase
FX998_20325	COG0142	geranyltranstransferase activity
FX998_20340	COG0693	protein deglycase activity
FX998_20345	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FX998_20355	COG2814	Major facilitator Superfamily
FX998_20365	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FX998_20370	COG1845	cytochrome c oxidase, subunit III
FX998_20375	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FX998_20380	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FX998_20385	COG2223	nitrite transmembrane transporter activity
FX998_20390	COG3056	Lipoprotein
FX998_20395	COG0271	Belongs to the BolA IbaG family
FX998_20415	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FX998_20420	COG0776	regulation of translation
FX998_20425	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FX998_20430	COG1555	photosystem II stabilization
FX998_20435	COG0824	Thioesterase
FX998_20445	COG4533	DNA binding
FX998_20455	COG1522	sequence-specific DNA binding
FX998_20460	COG1132	(ABC) transporter
FX998_20465	COG1132	(ABC) transporter
FX998_20470	COG0347	Belongs to the P(II) protein family
FX998_20475	COG0004	ammonium transporteR
FX998_20480	COG1946	Acyl-CoA thioesterase
FX998_20485	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FX998_20490	COG3695	enzyme binding
FX998_20500	COG5507	3-demethylubiquinone-9 3-methyltransferase
FX998_20505	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FX998_20515	COG0110	maltose O-acetyltransferase activity
FX998_20530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FX998_20535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FX998_20545	COG1196	nuclear chromosome segregation
FX998_20545	COG3264	Mechanosensitive ion channel
FX998_20555	COG3923	Primosomal replication protein n
FX998_20560	COG2832	Protein of unknown function (DUF454)
FX998_20570	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FX998_20585	COG0326	Molecular chaperone. Has ATPase activity
FX998_20610	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FX998_20615	COG4651	solute:proton antiporter activity
FX998_20615	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FX998_20620	COG2223	nitrite transmembrane transporter activity
FX998_20625	COG0737	Belongs to the 5'-nucleotidase family
FX998_20630	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FX998_20635	COG3735	TraB family
FX998_20645	COG3093	addiction module antidote protein HigA
FX998_20650	COG2217	Heavy metal translocating P-type atpase
FX998_20655	COG2066	Belongs to the glutaminase family
FX998_20660	COG0531	amino acid
FX998_20665	COG0789	Transcriptional regulator
FX998_20670	COG1585	Membrane protein implicated in regulation of membrane protease activity
FX998_20675	COG0330	HflC and HflK could
FX998_20680	COG4619	ABC transporter
FX998_20685	COG0390	transport system, permease component
FX998_20690	COG3118	belongs to the thioredoxin family
FX998_20695	COG0300	oxidoreductase activity
FX998_20700	COG2755	lipolytic protein G-D-S-L family
FX998_20705	COG4181	ATPase activity
FX998_20710	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FX998_20745	COG0583	DNA-binding transcription factor activity
FX998_20750	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FX998_20755	COG1414	Transcriptional regulator
FX998_20760	COG3960	tartronate-semialdehyde synthase activity
FX998_20770	COG2084	Dehydrogenase
FX998_20775	COG1953	Uracil, thiamine, allantoin
FX998_20785	COG2233	PERMEase
FX998_20790	COG1929	Belongs to the glycerate kinase type-1 family
FX998_20795	COG3257	ureidoglycine aminohydrolase activity
FX998_20800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FX998_20805	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FX998_20810	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FX998_20815	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FX998_20825	COG0549	Belongs to the carbamate kinase family
FX998_20830	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FX998_20835	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FX998_20845	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FX998_20855	COG1988	membrane-bound metal-dependent
FX998_20860	COG2501	S4 domain
FX998_20870	COG3539	Fimbrial protein
FX998_20875	COG3121	Chaperone
FX998_20880	COG3188	usher protein
FX998_20885	COG3539	Fimbrial protein
FX998_20890	COG3539	Fimbrial protein
FX998_20895	COG2197	response regulator
FX998_20905	COG2207	Transcriptional regulator
FX998_20915	COG4783	chaperone-mediated protein folding
FX998_20920	COG1215	transferase activity, transferring glycosyl groups
FX998_20925	COG5002	protein histidine kinase activity
FX998_20930	COG0745	RESPONSE REGULATOR receiver
FX998_20935	COG1538	Outer membrane efflux protein
FX998_20940	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FX998_20945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FX998_20950	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FX998_20955	COG1113	amino acid transport
FX998_20960	COG0668	transmembrane transport
FX998_20965	COG0778	Nitroreductase
FX998_20970	COG3316	Transposase and inactivated derivatives
FX998_20985	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FX998_21010	COG0438	transferase activity, transferring glycosyl groups
FX998_21015	COG0438	transferase activity, transferring glycosyl groups
FX998_21020	COG0500	methyltransferase
FX998_21040	COG3423	Transcriptional regulator
FX998_21060	COG3316	Transposase and inactivated derivatives
FX998_21085	COG3385	transposase activity
FX998_21090	COG2977	Belongs to the P-Pant transferase superfamily
FX998_21095	COG4771	TonB-dependent receptor
FX998_21105	COG2382	esterase
FX998_21110	COG3251	PFAM MbtH domain protein
FX998_21115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FX998_21115	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FX998_21120	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FX998_21125	COG1120	ATPase activity
FX998_21130	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FX998_21135	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FX998_21145	COG4592	Periplasmic binding protein
FX998_21150	COG1169	isochorismate synthase
FX998_21155	COG1021	2,3-dihydroxybenzoate-AMP ligase
FX998_21160	COG1535	isochorismatase
FX998_21160	COG3433	isochorismatase activity
FX998_21165	COG1028	Short-chain dehydrogenase reductase Sdr
FX998_21170	COG2050	protein possibly involved in aromatic compounds catabolism
FX998_21175	COG1966	Carbon starvation protein
FX998_21180	COG2879	small protein
FX998_21185	COG0371	Dehydrogenase
FX998_21190	COG0436	Aminotransferase
FX998_21195	COG1475	DNA binding
FX998_21200	COG3969	phosphoadenosine phosphosulfate
FX998_21205	COG0583	DNA-binding transcription factor activity
FX998_21210	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FX998_21215	COG0450	alkyl hydroperoxide reductase
FX998_21220	COG3634	alkyl hydroperoxide reductase activity
FX998_21225	COG0589	response to stress
FX998_21230	COG1063	alcohol dehydrogenase
FX998_21235	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FX998_21240	COG3719	Belongs to the RNase T2 family
FX998_21245	COG0471	metal ion transport
FX998_21260	COG3051	citrate lyase alpha subunit
FX998_21265	COG2301	Belongs to the HpcH HpaI aldolase family
FX998_21275	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FX998_21280	COG3290	protein histidine kinase activity
FX998_21285	COG4565	transcriptional regulatory protein
FX998_21290	COG3069	C4-dicarboxylate transmembrane transporter activity
FX998_21300	COG1278	Cold shock
FX998_21315	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FX998_21325	COG0583	DNA-binding transcription factor activity
FX998_21340	COG1686	Belongs to the peptidase S11 family
FX998_21345	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FX998_21350	COG0772	Belongs to the SEDS family
FX998_21355	COG0768	penicillin binding
FX998_21365	COG0799	negative regulation of ribosome biogenesis
FX998_21370	COG0406	alpha-ribazole phosphatase activity
FX998_21380	COG1466	dna polymerase III delta subunit
FX998_21395	COG2888	peptidyl-tyrosine sulfation
FX998_21400	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FX998_21410	COG2214	Heat shock protein DnaJ domain protein
FX998_21415	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FX998_21425	COG2214	Heat shock protein DnaJ domain protein
FX998_21430	COG0443	Heat shock 70 kDa protein
FX998_21440	COG1126	abc transporter atp-binding protein
FX998_21445	COG0765	amino acid transport
FX998_21450	COG0765	amino acid transport
FX998_21455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_21460	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FX998_21465	COG4535	Mg2 and Co2 transporter CorC
FX998_21475	COG1702	phosphate starvation-inducible protein PhoH
FX998_21485	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FX998_21525	COG0367	asparagine synthase
FX998_21530	COG0647	UMP catabolic process
FX998_21535	COG1846	Transcriptional regulator
FX998_21535	COG1940	carbohydrate kinase activity
FX998_21540	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FX998_21550	COG2190	(PTS) system
FX998_21550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FX998_21550	COG1263	PTS System
FX998_21570	COG0735	belongs to the Fur family
FX998_21580	COG0716	FMN binding
FX998_21590	COG0596	Alpha beta hydrolase
FX998_21595	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FX998_21600	COG0033	Phosphoglucomutase
FX998_21620	COG0531	amino acid
FX998_21635	COG0745	RESPONSE REGULATOR receiver
FX998_21640	COG2205	protein histidine kinase activity
FX998_21670	COG3209	COG3209 Rhs family protein
FX998_21705	COG3272	Protein of unknown function (DUF1722)
FX998_21710	COG0415	Belongs to the DNA photolyase family
FX998_21715	COG3104	oligopeptide transport
FX998_21720	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FX998_21725	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FX998_21730	COG1984	allophanate hydrolase subunit 2
FX998_21745	COG3180	Ammonia monooxygenase
FX998_21750	COG3539	Fimbrial protein
FX998_21755	COG3121	Chaperone
FX998_21760	COG3188	usher protein
FX998_21765	COG3539	Fimbrial protein
FX998_21770	COG0372	Belongs to the citrate synthase family
FX998_21780	COG2009	succinate dehydrogenase
FX998_21785	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FX998_21790	COG1053	succinate dehydrogenase
FX998_21795	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FX998_21800	COG0567	Dehydrogenase, E1 component
FX998_21805	COG0508	dehydrogenase complex catalyzes the overall conversion of
FX998_21815	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FX998_21820	COG2188	Transcriptional regulator
FX998_21825	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FX998_21825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_21825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FX998_21830	COG0383	alpha-mannosidase activity
FX998_21840	COG1271	oxidase subunit
FX998_21845	COG1294	oxidase, subunit
FX998_21850	COG4890	Cyd operon protein YbgT
FX998_21855	COG3790	cyd operon protein YbgE
FX998_21860	COG0824	Thioesterase
FX998_21865	COG0811	peptide transport
FX998_21870	COG0848	biopolymer transport protein
FX998_21875	COG3064	Membrane
FX998_21885	COG2885	chlorophyll binding
FX998_21890	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FX998_21940	COG3201	nicotinamide mononucleotide transporter
FX998_21945	COG1230	cation diffusion facilitator family transporter
FX998_21955	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FX998_21965	COG2017	converts alpha-aldose to the beta-anomer
FX998_21975	COG1085	galactose-1-phosphate uridylyltransferase
FX998_21980	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FX998_21985	COG1119	ATPase activity
FX998_21990	COG3585	molybdate ion transport
FX998_21990	COG2005	Transcriptional regulator
FX998_22000	COG0725	ABC transporter, periplasmic molybdate-binding protein
FX998_22005	COG4149	molybdate abc transporter
FX998_22010	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FX998_22015	COG0561	phosphatase activity
FX998_22025	COG0583	DNA-binding transcription factor activity
FX998_22030	COG2828	Protein conserved in bacteria
FX998_22035	COG0471	metal ion transport
FX998_22040	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FX998_22045	COG4677	pectinesterase activity
FX998_22050	COG1881	PFAM PEBP family protein
FX998_22055	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FX998_22070	COG2226	methyltransferase
FX998_22075	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FX998_22085	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FX998_22095	COG0521	Mo-molybdopterin cofactor biosynthetic process
FX998_22105	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FX998_22110	COG0314	molybdopterin synthase activity
FX998_22115	COG0670	Belongs to the BI1 family
FX998_22120	COG0670	Belongs to the BI1 family
FX998_22125	COG0392	lysyltransferase activity
FX998_22130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FX998_22135	COG3568	Endonuclease Exonuclease Phosphatase
FX998_22145	COG0842	Transport permease protein
FX998_22150	COG0842	Transport permease protein
FX998_22155	COG1131	(ABC) transporter
FX998_22165	COG1309	transcriptional regulator
FX998_22170	COG0513	Belongs to the DEAD box helicase family
FX998_22175	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
FX998_22180	COG1199	ATP-dependent helicase activity
FX998_22185	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FX998_22190	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FX998_22200	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FX998_22210	COG4774	siderophore transport
FX998_22225	COG0668	transmembrane transport
FX998_22230	COG1126	abc transporter atp-binding protein
FX998_22235	COG0765	amino acid transport
FX998_22240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_22250	COG5006	permease, DMT superfamily
FX998_22260	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FX998_22265	COG2194	sulfuric ester hydrolase activity
FX998_22275	COG1321	iron dependent repressor
FX998_22280	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FX998_22285	COG1376	ErfK ybiS ycfS ynhG family protein
FX998_22290	COG0488	(ABC) transporter
FX998_22300	COG0561	phosphatase activity
FX998_22310	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FX998_22315	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FX998_22320	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FX998_22325	COG0303	'Molybdopterin
FX998_22330	COG1446	asparaginase
FX998_22335	COG4172	Belongs to the ABC transporter superfamily
FX998_22340	COG0747	negative chemotaxis
FX998_22350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FX998_22360	COG2199	diguanylate cyclase activity
FX998_22375	COG2133	pyrroloquinoline quinone binding
FX998_22380	COG0625	glutathione transferase activity
FX998_22385	COG1686	Belongs to the peptidase S11 family
FX998_22390	COG1349	DNA-binding transcription factor activity
FX998_22395	COG0671	phosphoesterase, PA-phosphatase related
FX998_22400	COG2814	Major facilitator Superfamily
FX998_22410	COG0561	phosphatase activity
FX998_22415	COG0738	Major facilitator superfamily
FX998_22420	COG3226	Transcriptional regulator
FX998_22435	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FX998_22445	COG0778	Nitroreductase
FX998_22460	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FX998_22465	COG3842	ATPase activity
FX998_22470	COG1176	ABC-type spermidine putrescine transport system, permease component I
FX998_22475	COG1177	transmembrane transport
FX998_22490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_22495	COG4160	amino acid transport
FX998_22500	COG4215	(ABC) transporter
FX998_22505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FX998_22510	COG1126	abc transporter atp-binding protein
FX998_22525	COG3023	N-Acetylmuramoyl-L-alanine amidase
FX998_22530	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FX998_22535	COG0702	epimerase
FX998_22540	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FX998_22545	COG0028	Belongs to the TPP enzyme family
FX998_22550	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FX998_22560	COG2431	L-lysine efflux transmembrane transporter activity
FX998_22565	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FX998_22570	COG3593	DNA synthesis involved in DNA repair
FX998_22575	COG2990	Protein conserved in bacteria
FX998_22580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FX998_22585	COG1136	(ABC) transporter
FX998_22585	COG0577	efflux transmembrane transporter activity
FX998_22590	COG1278	Cold shock
FX998_22600	COG0542	response to heat
FX998_22625	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FX998_22630	COG4988	ABC transporter
FX998_22635	COG0492	ferredoxin-NADP+ reductase activity
FX998_22640	COG1522	sequence-specific DNA binding
FX998_22645	COG1178	ABC-type Fe3 transport system permease component
FX998_22645	COG1674	ftsk spoiiie
FX998_22655	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FX998_22665	COG0243	molybdopterin cofactor binding
FX998_22670	COG0437	4 iron, 4 sulfur cluster binding
FX998_22675	COG3302	dmso reductase anchor subunit
FX998_22680	COG1335	isochorismatase
FX998_22690	COG0531	amino acid
FX998_22695	COG0583	DNA-binding transcription factor activity
FX998_22700	COG2249	NAD(P)H dehydrogenase (quinone) activity
FX998_22705	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FX998_22710	COG1882	Formate acetyltransferase
FX998_22715	COG2116	formate transmembrane transporter activity
FX998_22720	COG1944	ATP diphosphatase activity
FX998_22725	COG2323	membrane
FX998_22740	COG0501	Belongs to the peptidase M48B family
FX998_22750	COG0539	negative regulation of cytoplasmic translation
FX998_22760	COG2333	competence protein COMEC
FX998_22760	COG0658	competence protein
FX998_22765	COG1132	(ABC) transporter
FX998_22770	COG1663	tetraacyldisaccharide 4'-kinase activity
FX998_22775	COG3214	Protein conserved in bacteria
FX998_22790	COG3173	Aminoglycoside phosphotransferase
FX998_22795	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FX998_22800	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FX998_22810	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FX998_22820	COG2989	Protein conserved in bacteria
FX998_22825	COG3108	Peptidase M15
FX998_22830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FX998_22835	COG1448	Aminotransferase
FX998_22840	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FX998_22855	COG0308	aminopeptidase N
FX998_22860	COG1116	anion transmembrane transporter activity
FX998_22865	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FX998_22875	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FX998_22880	COG0431	NADPH-dependent FMN reductase
FX998_22885	COG3539	Fimbrial protein
FX998_22890	COG3121	Chaperone
FX998_22895	COG3188	usher protein
FX998_22900	COG3539	Fimbrial protein
FX998_22905	COG3539	Fimbrial protein
FX998_22910	COG3539	Fimbrial protein
FX998_22915	COG3121	Chaperone
FX998_22930	COG0633	Ferredoxin
FX998_22930	COG3217	Mosc domain protein beta barrel domain protein
FX998_22940	COG0488	(ABC) transporter
FX998_22945	COG2995	paraquat-inducible protein a
FX998_22950	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FX998_22950	COG3008	intermembrane lipid transfer
FX998_22955	COG3009	Protein conserved in bacteria
FX998_22960	COG3130	regulation of translation
FX998_22970	COG1067	ATP-dependent peptidase activity
FX998_22980	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FX998_22980	COG2885	chlorophyll binding
FX998_22990	COG3070	regulator of competence-specific genes
FX998_22995	COG1289	transmembrane transporter activity
FX998_23000	COG3304	Inner membrane component domain
FX998_23005	COG0210	DNA helicase
FX998_23020	COG1832	CoA-binding protein
FX998_23035	COG1254	Belongs to the acylphosphatase family
FX998_23040	COG2920	part of a sulfur-relay system
FX998_23045	COG0670	Belongs to the BI1 family
FX998_23055	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FX998_23060	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FX998_23065	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
FX998_23070	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FX998_23075	COG1999	signal sequence binding
FX998_23080	COG1773	rubredoxin
FX998_23085	COG1271	oxidase subunit
FX998_23090	COG1294	oxidase, subunit
FX998_23105	COG3206	protein involved in exopolysaccharide biosynthesis
FX998_23105	COG0489	protein tyrosine kinase activity
FX998_23110	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FX998_23115	COG1596	polysaccharide export
FX998_23120	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FX998_23140	COG1278	Cold shock
FX998_23145	COG1278	Cold shock
FX998_23165	COG0348	domain, Protein
FX998_23170	COG0784	Response regulator, receiver
FX998_23170	COG2205	protein histidine kinase activity
FX998_23170	COG2198	Histidine kinase
FX998_23175	COG1879	ABC-type sugar transport system periplasmic component
FX998_23180	COG0745	RESPONSE REGULATOR receiver
FX998_23185	COG3005	denitrification pathway
FX998_23190	COG0243	molybdopterin cofactor binding
FX998_23195	COG3381	protein complex oligomerization
FX998_23230	COG3729	General stress protein
FX998_23235	COG2233	PERMEase
FX998_23250	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FX998_23275	COG1309	transcriptional regulator
FX998_23280	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FX998_23280	COG0506	proline dehydrogenase activity
FX998_23280	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FX998_23290	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FX998_23295	COG0672	)-iron permease
FX998_23300	COG2822	iron ion transport
FX998_23305	COG2837	iron assimilation
FX998_23310	COG1702	phosphate starvation-inducible protein PhoH
FX998_23315	COG3658	cytochrome
FX998_23320	COG1215	transferase activity, transferring glycosyl groups
FX998_23325	COG1649	PFAM Uncharacterised BCR, COG1649
FX998_23325	COG0726	polysaccharide deacetylase
FX998_23330	COG0457	Tetratricopeptide repeat
FX998_23335	COG3706	GGDEF domain
FX998_23380	COG3381	protein complex oligomerization
FX998_23390	COG1462	curli production assembly transport component CsgG
FX998_23405	COG2197	response regulator
FX998_23455	COG1484	DNA-dependent DNA replication
FX998_23555	COG3344	reverse transcriptase
FX998_23680	COG3316	Transposase and inactivated derivatives
FX998_23720	COG3316	Transposase and inactivated derivatives
FX998_23765	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FX998_23780	COG3316	Transposase and inactivated derivatives
FX998_23980	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FX998_23995	COG0741	lytic transglycosylase activity
FX998_24075	COG2805	Type II/IV secretion system protein
FX998_24180	COG0675	Transposase, IS605 OrfB family
FX998_24600	COG3316	Transposase and inactivated derivatives
FX998_24695	COG1660	Displays ATPase and GTPase activities
FX998_24705	COG3316	Transposase and inactivated derivatives
FX998_24735	COG3173	Aminoglycoside phosphotransferase
FX998_24745	COG3316	Transposase and inactivated derivatives
FX998_24750	COG3436	PFAM IS66 Orf2 family protein
FX998_24780	COG4771	TonB-dependent receptor
FX998_24855	COG1121	(ABC) transporter
FX998_24860	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FX998_24865	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FX998_24885	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FX998_24950	COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid
FX998_24970	COG1192	Involved in chromosome partitioning
FX998_24975	COG1475	DNA binding
FX998_25055	COG2963	transposase activity
FX998_25060	COG3436	PFAM IS66 Orf2 family protein
FX998_25065	COG4372	Transposase
FX998_25115	COG2235	arginine
FX998_25130	COG1288	antiporter activity
FX998_25150	COG3436	PFAM IS66 Orf2 family protein
FX998_25230	COG4644	lycopene metabolic process
FX998_25250	COG0697	spore germination
FX998_25275	COG3316	Transposase and inactivated derivatives
FX998_25320	COG0673	inositol 2-dehydrogenase activity