locus-tag	class	description
BA058_00080	COG3550	peptidyl-serine autophosphorylation
BA058_00085	COG1396	sequence-specific DNA binding
BA058_00095	COG3781	membrane
BA058_00110	COG2199	diguanylate cyclase activity
BA058_00120	COG2066	Belongs to the glutaminase family
BA058_00125	COG1012	belongs to the aldehyde dehydrogenase family
BA058_00130	COG0583	DNA-binding transcription factor activity
BA058_00145	COG1846	Transcriptional regulator
BA058_00150	COG4977	sequence-specific DNA binding
BA058_00160	COG2723	6-phospho-beta-galactosidase activity
BA058_00170	COG2188	Transcriptional regulator
BA058_00175	COG0697	spore germination
BA058_00180	COG2814	Major facilitator Superfamily
BA058_00190	COG3706	GGDEF domain
BA058_00195	COG3111	PFAM Bacterial OB fold (BOF) protein
BA058_00200	COG0339	signal peptide processing
BA058_00205	COG4221	oxidoreductase activity
BA058_00210	COG1802	Transcriptional regulator
BA058_00220	COG0246	Mannitol dehydrogenase
BA058_00225	COG0477	Major facilitator Superfamily
BA058_00230	COG1063	alcohol dehydrogenase
BA058_00235	COG4948	Mandelate Racemase Muconate Lactonizing
BA058_00250	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA058_00265	COG3381	protein complex oligomerization
BA058_00275	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BA058_00280	COG1940	carbohydrate kinase activity
BA058_00285	COG0583	DNA-binding transcription factor activity
BA058_00290	COG2814	Major facilitator Superfamily
BA058_00305	COG3591	Belongs to the peptidase S1B family
BA058_00320	COG0628	permease
BA058_00325	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BA058_00330	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BA058_00340	COG0531	amino acid
BA058_00350	COG3136	membrane protein required for alginate biosynthesis
BA058_00355	COG0745	RESPONSE REGULATOR receiver
BA058_00360	COG2205	protein histidine kinase activity
BA058_00370	COG0114	fumarate hydratase activity
BA058_00375	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BA058_00375	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BA058_00380	COG1482	cell wall glycoprotein biosynthetic process
BA058_00385	COG5339	Protein conserved in bacteria
BA058_00400	COG3250	beta-galactosidase activity
BA058_00405	COG1309	transcriptional regulator
BA058_00410	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_00415	COG1609	Transcriptional regulator
BA058_00420	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_00420	COG1263	PTS System
BA058_00425	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BA058_00435	COG0673	inositol 2-dehydrogenase activity
BA058_00475	COG4659	FMN binding
BA058_00485	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BA058_00495	COG3104	oligopeptide transport
BA058_00500	COG0625	glutathione transferase activity
BA058_00520	COG3895	Periplasmic Protein
BA058_00530	COG3133	Outer membrane lipoprotein
BA058_00545	COG1566	PFAM secretion protein HlyD family protein
BA058_00550	COG1289	transmembrane transporter activity
BA058_00555	COG2032	superoxide dismutase activity
BA058_00560	COG4989	oxidoreductase activity
BA058_00565	COG3313	Fe-S protein
BA058_00570	COG1309	transcriptional regulator
BA058_00575	COG1902	pentaerythritol trinitrate reductase activity
BA058_00580	COG0346	lactoylglutathione lyase activity
BA058_00595	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BA058_00600	COG0791	NLP P60 protein
BA058_00605	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BA058_00610	COG2814	Major facilitator Superfamily
BA058_00625	COG0583	DNA-binding transcription factor activity
BA058_00630	COG2814	Major facilitator Superfamily
BA058_00635	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BA058_00640	COG0307	riboflavin synthase, alpha
BA058_00650	COG3468	outer membrane autotransporter barrel domain protein
BA058_00670	COG4529	Protein conserved in bacteria
BA058_00680	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
BA058_00685	COG0437	4 iron, 4 sulfur cluster binding
BA058_00695	COG2414	aldehyde ferredoxin oxidoreductase
BA058_00700	COG0437	4 iron, 4 sulfur cluster binding
BA058_00710	COG0469	pyruvate kinase activity
BA058_00715	COG4238	major outer membrane lipoprotein
BA058_00720	COG1376	ErfK ybiS ycfS ynhG family protein
BA058_00735	COG0719	Fe-S assembly protein
BA058_00740	COG0396	ATPase activity
BA058_00745	COG0719	Fe-S assembly protein
BA058_00750	COG0316	Belongs to the HesB IscA family
BA058_00760	COG2050	protein possibly involved in aromatic compounds catabolism
BA058_00765	COG0277	FAD linked oxidase domain protein
BA058_00765	COG0247	lactate metabolic process
BA058_00770	COG0628	permease
BA058_00785	COG0738	Major facilitator superfamily
BA058_00790	COG2271	Major facilitator Superfamily
BA058_00805	COG4670	ketone body catabolic process
BA058_00810	COG1960	acyl-CoA dehydrogenase activity
BA058_00815	COG1917	Cupin 2, conserved barrel domain protein
BA058_00815	COG2207	Transcriptional regulator
BA058_00825	COG2086	electron transfer activity
BA058_00830	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BA058_00835	COG0644	oxidoreductase
BA058_00840	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
BA058_00845	COG0318	PFAM AMP-dependent synthetase and ligase
BA058_00850	COG0574	Belongs to the PEP-utilizing enzyme family
BA058_00850	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA058_00865	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA058_00870	COG4256	Hemin uptake protein
BA058_00880	COG2200	EAL domain
BA058_00885	COG0791	NLP P60 protein
BA058_00895	COG0386	Belongs to the glutathione peroxidase family
BA058_00955	COG3137	Salt-induced outer membrane protein
BA058_00960	COG1105	Belongs to the carbohydrate kinase PfkB family
BA058_00980	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA058_00985	COG1988	membrane-bound metal-dependent
BA058_01000	COG0753	catalase activity
BA058_01010	COG1486	melibiose metabolic process
BA058_01015	COG2169	Transcriptional regulator
BA058_01015	COG1917	Cupin 2, conserved barrel domain protein
BA058_01020	COG1447	Phosphotransferase system cellobiose-specific component IIA
BA058_01025	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BA058_01030	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BA058_01035	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA058_01050	COG0322	excinuclease ABC activity
BA058_01060	COG3678	ATP-independent chaperone mediated protein folding
BA058_01090	COG0708	Exodeoxyribonuclease III
BA058_01095	COG0398	Pfam SNARE associated Golgi protein
BA058_01105	COG0398	Pfam SNARE associated Golgi protein
BA058_01110	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA058_01115	COG4134	Bacterial extracellular solute-binding protein
BA058_01120	COG4135	transport system, permease component
BA058_01125	COG4136	ATPase activity
BA058_01130	COG2897	thiosulfate sulfurtransferase activity
BA058_01135	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BA058_01140	COG0494	nUDIX hydrolase
BA058_01150	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BA058_01165	COG0443	Heat shock 70 kDa protein
BA058_01170	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA058_01175	COG0709	Synthesizes selenophosphate from selenide and ATP
BA058_01185	COG0778	Nitroreductase
BA058_01195	COG0616	signal peptide processing
BA058_01200	COG0252	asparaginase activity
BA058_01205	COG1335	isochorismatase
BA058_01210	COG2814	Major facilitator Superfamily
BA058_01215	COG1349	DNA-binding transcription factor activity
BA058_01220	COG0667	Aldo Keto reductase
BA058_01225	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_01230	COG0191	fructose-bisphosphate aldolase activity
BA058_01235	COG1063	alcohol dehydrogenase
BA058_01240	COG2271	Major facilitator Superfamily
BA058_01245	COG1063	alcohol dehydrogenase
BA058_01250	COG3139	Protein of unknown function (DUF1315)
BA058_01260	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA058_01265	COG0676	glucose-6-phosphate 1-epimerase activity
BA058_01270	COG0656	L-ascorbic acid biosynthetic process
BA058_01275	COG3713	MltA-interacting MipA family protein
BA058_01280	COG2766	serine protein kinase
BA058_01290	COG2199	diguanylate cyclase activity
BA058_01295	COG2199	diguanylate cyclase activity
BA058_01300	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BA058_01315	COG2207	Transcriptional regulator
BA058_01320	COG2807	transmembrane transport
BA058_01325	COG3189	MarR family transcriptional regulator
BA058_01330	COG3042	response to heat
BA058_01335	COG2203	Gaf domain
BA058_01335	COG2199	diguanylate cyclase activity
BA058_01345	COG2261	transglycosylase associated protein
BA058_01355	COG3615	Tellurite resistance protein tehB
BA058_01370	COG0473	3-isopropylmalate dehydrogenase activity
BA058_01375	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BA058_01380	COG0318	PFAM AMP-dependent synthetase and ligase
BA058_01385	COG3065	identical protein binding
BA058_01390	COG1214	PFAM Peptidase M22, glycoprotease
BA058_01395	COG1199	ATP-dependent helicase activity
BA058_01400	COG0251	oxidation-reduction process
BA058_01420	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BA058_01430	COG1760	l-serine dehydratase
BA058_01435	COG2200	EAL domain
BA058_01440	COG1253	flavin adenine dinucleotide binding
BA058_01450	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_01450	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_01455	COG3715	PTS system
BA058_01460	COG3716	PTS system mannose fructose sorbose family IID component
BA058_01480	COG2226	methyltransferase
BA058_01485	COG1278	Cold shock
BA058_01515	COG1414	Transcriptional regulator
BA058_01520	COG2814	Major facilitator Superfamily
BA058_01530	COG0793	Belongs to the peptidase S41A family
BA058_01540	COG1956	GAF domain-containing protein
BA058_01545	COG2995	paraquat-inducible protein a
BA058_01550	COG3008	intermembrane lipid transfer
BA058_01570	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BA058_01585	COG1276	copper resistance
BA058_01590	COG2372	response to copper ion
BA058_01600	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA058_01605	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BA058_01610	COG1770	oligopeptidase
BA058_01615	COG2979	Protein of unknown function (DUF533)
BA058_01630	COG3141	response to X-ray
BA058_01640	COG0800	Aldolase
BA058_01645	COG0129	dihydroxy-acid dehydratase activity
BA058_01650	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BA058_01660	COG1737	Transcriptional regulator
BA058_01665	COG0469	pyruvate kinase activity
BA058_01670	COG1560	Kdo2-lipid A biosynthetic process
BA058_01675	COG0739	heme binding
BA058_01680	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BA058_01685	COG1121	(ABC) transporter
BA058_01690	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BA058_01715	COG0217	transcriptional regulatory protein
BA058_01720	COG0494	nUDIX hydrolase
BA058_01730	COG1335	isochorismatase
BA058_01735	COG1801	Protein of unknown function DUF72
BA058_01740	COG3788	relative of glutathione S-transferase, MAPEG superfamily
BA058_01755	COG0243	molybdopterin cofactor binding
BA058_01760	COG3005	denitrification pathway
BA058_01770	COG3102	Protein conserved in bacteria
BA058_01785	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BA058_01790	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BA058_01795	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BA058_01800	COG0745	RESPONSE REGULATOR receiver
BA058_01810	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BA058_01815	COG0840	transmembrane signaling receptor activity
BA058_01820	COG0835	chemotaxis
BA058_01825	COG2198	Histidine kinase
BA058_01825	COG0643	Histidine kinase
BA058_01830	COG1360	Flagellar Motor Protein
BA058_01835	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BA058_01850	COG0589	response to stress
BA058_01860	COG1877	trehalose-phosphatase activity
BA058_01865	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA058_01875	COG1879	ABC-type sugar transport system periplasmic component
BA058_01880	COG1528	Iron-storage protein
BA058_01900	COG1528	Iron-storage protein
BA058_01910	COG0814	amino acid
BA058_01915	COG3318	Belongs to the UPF0149 family
BA058_01915	COG3012	SEC-C Motif Domain Protein
BA058_01935	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BA058_01945	COG2197	response regulator
BA058_01960	COG2197	response regulator
BA058_01990	COG1191	sigma factor activity
BA058_02000	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BA058_02005	COG1516	flagellar protein fliS
BA058_02015	COG0366	Alpha amylase catalytic
BA058_02025	COG2391	methyltransferase activity
BA058_02030	COG0425	Belongs to the sulfur carrier protein TusA family
BA058_02035	COG2135	peptidase activity
BA058_02045	COG2207	Transcriptional regulator
BA058_02050	COG1881	PFAM PEBP family protein
BA058_02055	COG2076	Multidrug Resistance protein
BA058_02070	COG1766	The M ring may be actively involved in energy transduction
BA058_02075	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BA058_02080	COG1317	bacterial-type flagellum organization
BA058_02085	COG1157	protein secretion by the type III secretion system
BA058_02090	COG2882	bacterial-type flagellum organization
BA058_02095	COG3144	bacterial-type flagellum assembly
BA058_02100	COG1580	Controls the rotational direction of flagella during chemotaxis
BA058_02105	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BA058_02110	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BA058_02115	COG3190	flagellar
BA058_02120	COG1338	Plays a role in the flagellum-specific transport system
BA058_02125	COG1987	bacterial-type flagellum assembly
BA058_02130	COG1684	flagellar biosynthetic protein fliR
BA058_02135	COG2197	response regulator
BA058_02160	COG5475	Uncharacterized small protein (DUF2158)
BA058_02165	COG2354	Protein conserved in bacteria
BA058_02170	COG0697	spore germination
BA058_02175	COG3727	T/G mismatch-specific endonuclease activity
BA058_02180	COG0270	DNA (cytosine-5-)-methyltransferase activity
BA058_02185	COG1418	mRNA catabolic process
BA058_02200	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA058_02215	COG2205	protein histidine kinase activity
BA058_02220	COG0745	RESPONSE REGULATOR receiver
BA058_02225	COG2351	hydroxyisourate hydrolase activity
BA058_02240	COG3443	Belongs to the bacterial solute-binding protein 9 family
BA058_02250	COG0582	viral genome integration into host DNA
BA058_02385	COG0582	viral genome integration into host DNA
BA058_02395	COG2814	Major facilitator Superfamily
BA058_02400	COG1132	(ABC) transporter
BA058_02415	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BA058_02415	COG3433	isochorismatase activity
BA058_02415	COG2226	methyltransferase
BA058_02435	COG1021	2,3-dihydroxybenzoate-AMP ligase
BA058_02440	COG4771	TonB-dependent receptor
BA058_02445	COG2373	Large extracellular alpha-helical protein
BA058_02445	COG1388	LysM domain
BA058_02445	COG4932	domain protein
BA058_02450	COG1388	LysM domain
BA058_02450	COG1470	cell adhesion involved in biofilm formation
BA058_02455	COG1388	LysM domain
BA058_02455	COG1470	cell adhesion involved in biofilm formation
BA058_02460	COG1470	cell adhesion involved in biofilm formation
BA058_02460	COG1388	LysM domain
BA058_02470	COG0477	Major facilitator Superfamily
BA058_02475	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BA058_02490	COG0583	DNA-binding transcription factor activity
BA058_02495	COG0583	DNA-binding transcription factor activity
BA058_02505	COG0534	Mate efflux family protein
BA058_02515	COG0582	viral genome integration into host DNA
BA058_02555	COG0154	amidase activity
BA058_02585	COG1960	acyl-CoA dehydrogenase activity
BA058_02590	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BA058_02595	COG1250	3-hydroxyacyl-CoA dehydrogenase
BA058_02610	COG2197	response regulator
BA058_02625	COG2801	Transposase and inactivated derivatives
BA058_02635	COG1376	ErfK ybiS ycfS ynhG family protein
BA058_02650	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
BA058_02660	COG4771	TonB-dependent receptor
BA058_02665	COG1475	DNA binding
BA058_02670	COG3969	phosphoadenosine phosphosulfate
BA058_02675	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BA058_02680	COG1215	transferase activity, transferring glycosyl groups
BA058_02700	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_02715	COG1735	metal-dependent hydrolase with the TIM-barrel fold
BA058_02720	COG0405	Gamma-glutamyltransferase
BA058_02770	COG3547	Transposase (IS116 IS110 IS902 family)
BA058_02815	COG1120	ATPase activity
BA058_02820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA058_02880	COG2003	Belongs to the UPF0758 family
BA058_02910	COG4917	ethanolamine utilization protein
BA058_02920	COG1289	transmembrane transporter activity
BA058_02925	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BA058_02930	COG1686	Belongs to the peptidase S11 family
BA058_02935	COG2925	Exonuclease
BA058_02940	COG0531	amino acid
BA058_02945	COG0583	DNA-binding transcription factor activity
BA058_02950	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BA058_02955	COG4115	mRNA cleavage
BA058_02960	COG2161	toxin-antitoxin pair type II binding
BA058_02970	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BA058_02980	COG0131	Imidazoleglycerol-phosphate dehydratase
BA058_02980	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA058_02985	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BA058_03000	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BA058_03000	COG0140	phosphoribosyl-ATP diphosphatase activity
BA058_03005	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
BA058_03010	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BA058_03015	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BA058_03020	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA058_03035	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BA058_03050	COG1216	Glycosyl transferase, family 2
BA058_03065	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BA058_03075	COG0438	transferase activity, transferring glycosyl groups
BA058_03080	COG2327	Polysaccharide pyruvyl transferase
BA058_03085	COG2244	polysaccharide biosynthetic process
BA058_03090	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA058_03095	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA058_03100	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
BA058_03100	COG0662	Cupin 2, conserved barrel domain protein
BA058_03105	COG0297	glycogen (starch) synthase activity
BA058_03110	COG1051	belongs to the nudix hydrolase family
BA058_03115	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BA058_03120	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BA058_03125	COG0110	maltose O-acetyltransferase activity
BA058_03130	COG1216	Glycosyl transferase, family 2
BA058_03140	COG0438	transferase activity, transferring glycosyl groups
BA058_03145	COG1045	serine acetyltransferase
BA058_03150	COG0463	Glycosyl transferase, family 2
BA058_03155	COG3206	protein involved in exopolysaccharide biosynthesis
BA058_03155	COG0489	protein tyrosine kinase activity
BA058_03160	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BA058_03165	COG1596	polysaccharide export
BA058_03170	COG1253	flavin adenine dinucleotide binding
BA058_03175	COG2982	Protein involved in outer membrane biogenesis
BA058_03185	COG0572	uridine kinase
BA058_03190	COG5002	protein histidine kinase activity
BA058_03190	COG5001	Diguanylate cyclase
BA058_03190	COG3447	MASE1 domain protein
BA058_03195	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BA058_03200	COG0443	Heat shock 70 kDa protein
BA058_03205	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
BA058_03210	COG0631	protein serine/threonine phosphatase activity
BA058_03215	COG4245	von Willebrand factor, type A
BA058_03240	COG2205	protein histidine kinase activity
BA058_03245	COG0745	RESPONSE REGULATOR receiver
BA058_03295	COG1063	alcohol dehydrogenase
BA058_03300	COG3775	system Galactitol-specific IIC component
BA058_03305	COG3414	Phosphotransferase system galactitol-specific IIB component
BA058_03310	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_03325	COG1830	Aldolase
BA058_03330	COG2211	Major facilitator Superfamily
BA058_03335	COG1397	ADP-ribosylglycohydrolase
BA058_03340	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_03345	COG2188	Transcriptional regulator
BA058_03350	COG3757	hydrolase, family 25
BA058_03355	COG0351	phosphomethylpyrimidine kinase
BA058_03375	COG5455	response to cobalt ion
BA058_03380	COG3539	Fimbrial protein
BA058_03385	COG3188	usher protein
BA058_03390	COG3121	Chaperone
BA058_03395	COG3539	Fimbrial protein
BA058_03410	COG0489	protein tyrosine kinase activity
BA058_03420	COG3831	ATPase activity
BA058_03425	COG3831	ATPase activity
BA058_03440	COG0714	Associated with various cellular activities
BA058_03445	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BA058_03450	COG3552	Protein containing von Willebrand factor type A (VWA) domain
BA058_03455	COG4715	Zinc finger, swim domain protein
BA058_03460	COG4715	Zinc finger, swim domain protein
BA058_03465	COG4808	Protein conserved in bacteria
BA058_03470	COG4807	Protein conserved in bacteria
BA058_03475	COG3279	Response regulator of the LytR AlgR family
BA058_03480	COG3275	phosphorelay sensor kinase activity
BA058_03485	COG0789	Transcriptional regulator
BA058_03495	COG1174	glycine betaine transport
BA058_03500	COG1125	glycine betaine transport
BA058_03505	COG1174	glycine betaine transport
BA058_03510	COG1732	Glycine betaine
BA058_03515	COG1472	Belongs to the glycosyl hydrolase 3 family
BA058_03520	COG0277	FAD linked oxidase domain protein
BA058_03525	COG1686	Belongs to the peptidase S11 family
BA058_03535	COG0586	Pfam SNARE associated Golgi protein
BA058_03540	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_03545	COG1538	Outer membrane efflux protein
BA058_03555	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA058_03565	COG1346	cytolysis
BA058_03575	COG2949	membrane
BA058_03585	COG0493	'glutamate synthase
BA058_03590	COG0167	dihydroorotate dehydrogenase activity
BA058_03590	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BA058_03595	COG4211	Belongs to the binding-protein-dependent transport system permease family
BA058_03605	COG1879	ABC-type sugar transport system periplasmic component
BA058_03610	COG1609	Transcriptional regulator
BA058_03620	COG2311	Membrane
BA058_03640	COG4771	TonB-dependent receptor
BA058_03650	COG0833	amino acid
BA058_03655	COG0583	DNA-binding transcription factor activity
BA058_03660	COG2855	membrane
BA058_03670	COG1522	sequence-specific DNA binding
BA058_03670	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_03675	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA058_03685	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA058_03690	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA058_03695	COG2313	pseudouridylate synthase activity
BA058_03700	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_03705	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BA058_03705	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_03705	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_03710	COG1105	Belongs to the carbohydrate kinase PfkB family
BA058_03715	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_03715	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_03720	COG2814	Major facilitator Superfamily
BA058_03735	COG0246	Mannitol dehydrogenase
BA058_03740	COG0523	cobalamin synthesis protein
BA058_03745	COG0671	phosphoesterase, PA-phosphatase related
BA058_03750	COG0791	NLP P60 protein
BA058_03755	COG2200	EAL domain
BA058_03760	COG4166	transmembrane transport
BA058_03765	COG4174	ABC transporter (Permease)
BA058_03770	COG4239	(ABC) transporter, permease
BA058_03775	COG4172	Belongs to the ABC transporter superfamily
BA058_03785	COG2814	Major facilitator Superfamily
BA058_03790	COG1187	pseudouridine synthase activity
BA058_03795	COG1061	Type III restriction enzyme res subunit
BA058_03815	COG3083	sulfuric ester hydrolase activity
BA058_03825	COG3468	outer membrane autotransporter barrel domain protein
BA058_03830	COG3468	outer membrane autotransporter barrel domain protein
BA058_03840	COG2197	response regulator
BA058_03845	COG3088	subunit of a heme lyase
BA058_03845	COG4235	cytochrome complex assembly
BA058_03850	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BA058_03855	COG1138	Cytochrome C-type biogenesis protein
BA058_03865	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA058_03870	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA058_03875	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA058_03885	COG3005	denitrification pathway
BA058_03890	COG3043	anaerobic respiration
BA058_03895	COG0348	domain, Protein
BA058_03900	COG0437	4 iron, 4 sulfur cluster binding
BA058_03910	COG3062	negative regulation of establishment of protein localization
BA058_03915	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_03915	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_03935	COG4615	Cyclic peptide transporter
BA058_03940	COG3145	DNA-N1-methyladenine dioxygenase activity
BA058_03945	COG2169	Transcriptional regulator
BA058_03945	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BA058_03950	COG1477	protein flavinylation
BA058_03955	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA058_03965	COG2198	Histidine kinase
BA058_03965	COG0642	Histidine kinase
BA058_03970	COG2197	response regulator
BA058_03975	COG2205	protein histidine kinase activity
BA058_03975	COG0784	Response regulator, receiver
BA058_03980	COG3852	Histidine kinase
BA058_03985	COG2204	response regulator
BA058_03990	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BA058_03995	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BA058_04000	COG2031	fatty acid transporter
BA058_04005	COG0183	Belongs to the thiolase family
BA058_04010	COG4676	Protein conserved in bacteria
BA058_04015	COG5445	Predicted secreted protein (DUF2300)
BA058_04020	COG2373	Large extracellular alpha-helical protein
BA058_04025	COG3234	Protein of unknown function (DUF1175)
BA058_04030	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
BA058_04035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BA058_04045	COG3468	outer membrane autotransporter barrel domain protein
BA058_04055	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA058_04060	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA058_04065	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA058_04070	COG3642	lipopolysaccharide core region biosynthetic process
BA058_04075	COG0584	glycerophosphoryl diester phosphodiesterase
BA058_04080	COG2271	Major facilitator Superfamily
BA058_04085	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BA058_04095	COG0247	lactate metabolic process
BA058_04105	COG5464	transposase or invertase
BA058_04120	COG2271	Major facilitator Superfamily
BA058_04130	COG1414	Transcriptional regulator
BA058_04195	COG0318	PFAM AMP-dependent synthetase and ligase
BA058_04205	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BA058_04220	COG1169	isochorismate synthase
BA058_04225	COG4575	ribosome binding
BA058_04230	COG2153	protein acetylation
BA058_04240	COG5160	protein modification by small protein removal
BA058_04245	COG2234	aminopeptidase activity
BA058_04260	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BA058_04265	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BA058_04275	COG0839	Belongs to the complex I subunit 6 family
BA058_04280	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BA058_04290	COG1034	ATP synthesis coupled electron transport
BA058_04295	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BA058_04300	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BA058_04320	COG0583	DNA-binding transcription factor activity
BA058_04325	COG0436	Aminotransferase
BA058_04335	COG0490	domain, Protein
BA058_04335	COG0471	metal ion transport
BA058_04340	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA058_04360	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA058_04365	COG0280	phosphate acetyltransferase
BA058_04365	COG0857	belongs to the CobB CobQ family
BA058_04370	COG1288	antiporter activity
BA058_04375	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BA058_04380	COG0622	Phosphoesterase
BA058_04385	COG0625	glutathione transferase activity
BA058_04390	COG0625	glutathione transferase activity
BA058_04395	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BA058_04400	COG1090	epimerase
BA058_04405	COG5464	transposase or invertase
BA058_04410	COG4598	ABC transporter
BA058_04415	COG4160	amino acid transport
BA058_04420	COG4215	(ABC) transporter
BA058_04425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_04430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_04435	COG0163	prenyltransferase activity
BA058_04440	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BA058_04445	COG1286	toxin biosynthetic process
BA058_04450	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BA058_04455	COG0285	dihydrofolate synthase activity
BA058_04465	COG0586	Pfam SNARE associated Golgi protein
BA058_04475	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA058_04490	COG2814	Major facilitator Superfamily
BA058_04495	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BA058_04510	COG3101	peptidyl-lysine hydroxylation
BA058_04515	COG0730	response to heat
BA058_04525	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BA058_04550	COG3539	Fimbrial protein
BA058_04555	COG3539	Fimbrial protein
BA058_04560	COG3539	Fimbrial protein
BA058_04565	COG3121	Chaperone
BA058_04570	COG3188	usher protein
BA058_04575	COG3539	Fimbrial protein
BA058_04580	COG2062	phosphohistidine phosphatase, SixA
BA058_04595	COG3691	Protein conserved in bacteria
BA058_04600	COG2067	long-chain fatty acid transport protein
BA058_04610	COG2116	formate transmembrane transporter activity
BA058_04645	COG2610	gluconate transmembrane transporter activity
BA058_04655	COG0477	Major facilitator Superfamily
BA058_04660	COG1566	PFAM secretion protein HlyD family protein
BA058_04665	COG2197	response regulator
BA058_04670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_04670	COG0784	Response regulator, receiver
BA058_04670	COG2205	protein histidine kinase activity
BA058_04670	COG2198	Histidine kinase
BA058_04675	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BA058_04680	COG0679	Auxin Efflux Carrier
BA058_04685	COG0028	Belongs to the TPP enzyme family
BA058_04715	COG3316	Transposase and inactivated derivatives
BA058_04730	COG1660	Displays ATPase and GTPase activities
BA058_04740	COG3316	Transposase and inactivated derivatives
BA058_04760	COG3316	Transposase and inactivated derivatives
BA058_04805	COG2916	Histone family protein nucleoid-structuring protein H-NS
BA058_04810	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA058_04815	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BA058_04845	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
BA058_04855	COG2948	multi-organism process
BA058_04885	COG0028	Belongs to the TPP enzyme family
BA058_04915	COG1560	Kdo2-lipid A biosynthetic process
BA058_04920	COG0436	Aminotransferase
BA058_04925	COG3275	phosphorelay sensor kinase activity
BA058_04930	COG3279	Response regulator of the LytR AlgR family
BA058_04935	COG2207	Transcriptional regulator
BA058_04940	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA058_04940	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_04940	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_04945	COG1363	Peptidase, m42
BA058_04950	COG0006	proline dipeptidase activity
BA058_04955	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_04960	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_04990	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA058_04995	COG2199	diguanylate cyclase activity
BA058_04995	COG2200	EAL domain
BA058_05010	COG3415	Transposase
BA058_05015	COG3415	Transposase
BA058_05045	COG0583	DNA-binding transcription factor activity
BA058_05055	COG2211	Major facilitator Superfamily
BA058_05060	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BA058_05070	COG0583	DNA-binding transcription factor activity
BA058_05075	COG0385	Bile acid
BA058_05080	COG3530	Putative quorum-sensing-regulated virulence factor
BA058_05100	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BA058_05105	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_05110	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA058_05115	COG2190	(PTS) system
BA058_05130	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BA058_05135	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BA058_05140	COG4208	sulfate ABC transporter
BA058_05145	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BA058_05150	COG4150	thiosulfate binding
BA058_05155	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_05165	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_05165	COG1263	PTS System
BA058_05170	COG2837	iron assimilation
BA058_05190	COG0860	N-Acetylmuramoyl-L-alanine amidase
BA058_05200	COG2207	Transcriptional regulator
BA058_05205	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA058_05210	COG4816	utilization protein
BA058_05220	COG4303	Ethanolamine ammonia lyase large subunit
BA058_05225	COG4819	ethanolamine utilization protein
BA058_05230	COG3192	ethanolamine utilization protein
BA058_05235	COG1454	alcohol dehydrogenase
BA058_05240	COG4820	ethanolamine utilization protein (EutJ)
BA058_05245	COG1012	belongs to the aldehyde dehydrogenase family
BA058_05250	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
BA058_05255	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA058_05260	COG0280	phosphate acetyltransferase
BA058_05265	COG4812	Cobalamin adenosyltransferase
BA058_05270	COG4766	ethanolamine catabolic process
BA058_05275	COG4917	ethanolamine utilization protein
BA058_05280	COG4810	utilization protein
BA058_05285	COG0280	phosphate acetyltransferase
BA058_05285	COG0281	malic enzyme
BA058_05290	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BA058_05295	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA058_05300	COG5342	invasion associated locus B
BA058_05310	COG0493	'glutamate synthase
BA058_05310	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_05315	COG3850	Histidine kinase
BA058_05320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA058_05330	COG1393	Belongs to the ArsC family
BA058_05345	COG0400	carboxylic ester hydrolase activity
BA058_05355	COG2321	neutral zinc metallopeptidase
BA058_05370	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BA058_05380	COG2716	regulation of RNA biosynthetic process
BA058_05385	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BA058_05390	COG0628	permease
BA058_05395	COG4783	chaperone-mediated protein folding
BA058_05400	COG1393	Belongs to the ArsC family
BA058_05410	COG2233	PERMEase
BA058_05425	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BA058_05430	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BA058_05435	COG0248	Ppx GppA phosphatase
BA058_05455	COG3133	Outer membrane lipoprotein
BA058_05470	COG0517	IMP dehydrogenase activity
BA058_05470	COG0516	GMP reductase activity
BA058_05495	COG1645	bacterial-type flagellum-dependent swarming motility
BA058_05510	COG2976	Protein conserved in bacteria
BA058_05540	COG4953	penicillin-binding protein 1C
BA058_05545	COG2373	Large extracellular alpha-helical protein
BA058_05550	COG2897	thiosulfate sulfurtransferase activity
BA058_05565	COG2975	iron-sulfur cluster assembly
BA058_05570	COG0633	Ferredoxin
BA058_05590	COG0822	iron-sulfur transferase activity
BA058_05610	COG0483	inositol monophosphate 1-phosphatase activity
BA058_05615	COG1073	alpha beta
BA058_05620	COG3711	transcriptional antiterminator
BA058_05625	COG2814	Major facilitator Superfamily
BA058_05630	COG2259	Doxx family
BA058_05645	COG2801	Transposase and inactivated derivatives
BA058_05650	COG2017	converts alpha-aldose to the beta-anomer
BA058_05655	COG1063	alcohol dehydrogenase
BA058_05660	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA058_05665	COG1129	ABC transporter
BA058_05670	COG1879	ABC-type sugar transport system periplasmic component
BA058_05675	COG0457	Tetratricopeptide repeat
BA058_05680	COG1940	carbohydrate kinase activity
BA058_05690	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA058_05690	COG1017	nitric oxide dioxygenase activity
BA058_05695	COG0347	Belongs to the P(II) protein family
BA058_05700	COG2204	response regulator
BA058_05705	COG3170	Tfp pilus assembly protein FimV
BA058_05710	COG2205	protein histidine kinase activity
BA058_05725	COG0590	tRNA wobble adenosine to inosine editing
BA058_05730	COG0560	Phosphoserine phosphatase
BA058_05735	COG1737	Transcriptional regulator
BA058_05740	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_05760	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BA058_05780	COG0681	Belongs to the peptidase S26 family
BA058_05790	COG3086	response to oxidative stress
BA058_05795	COG3026	antisigma factor binding
BA058_05800	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
BA058_05805	COG1595	DNA-templated transcription, initiation
BA058_05815	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BA058_05825	COG0513	Belongs to the DEAD box helicase family
BA058_05830	COG0583	DNA-binding transcription factor activity
BA058_05850	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA058_05860	COG3118	belongs to the thioredoxin family
BA058_05870	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA058_05870	COG1042	CoA-binding domain protein
BA058_05870	COG0045	succinate-CoA ligase (ADP-forming) activity
BA058_05875	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA058_05880	COG5544	Lipoprotein
BA058_05885	COG0477	Major facilitator Superfamily
BA058_05905	COG2801	Transposase and inactivated derivatives
BA058_05940	COG0542	response to heat
BA058_05950	COG0564	pseudouridine synthase activity
BA058_05955	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA058_05965	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA058_05970	COG0077	Prephenate dehydratase
BA058_05970	COG1605	Chorismate mutase
BA058_05975	COG0287	Prephenate dehydrogenase
BA058_05975	COG1605	Chorismate mutase
BA058_05980	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA058_05995	COG2199	diguanylate cyclase activity
BA058_06000	COG2885	chlorophyll binding
BA058_06025	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BA058_06030	COG4137	Cytochrome C assembly protein
BA058_06035	COG4536	flavin adenine dinucleotide binding
BA058_06050	COG0497	DNA recombination
BA058_06055	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA058_06060	COG2914	Belongs to the UPF0125 (RnfH) family
BA058_06065	COG2867	negative regulation of translational initiation
BA058_06080	COG0582	viral genome integration into host DNA
BA058_06230	COG0579	oxidoreductase
BA058_06235	COG1012	belongs to the aldehyde dehydrogenase family
BA058_06240	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA058_06245	COG1113	amino acid transport
BA058_06250	COG1802	Transcriptional regulator
BA058_06255	COG1652	LysM domain
BA058_06260	COG0401	homolog of Blt101
BA058_06265	COG0640	Transcriptional regulator
BA058_06270	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA058_06275	COG2916	Histone family protein nucleoid-structuring protein H-NS
BA058_06290	COG4575	ribosome binding
BA058_06300	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA058_06305	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA058_06310	COG1780	Probably involved in ribonucleotide reductase function
BA058_06315	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA058_06320	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA058_06325	COG4175	Glycine betaine
BA058_06330	COG4176	ABC-type proline glycine betaine transport system permease component
BA058_06335	COG2113	Glycine betaine
BA058_06340	COG2814	Major facilitator Superfamily
BA058_06345	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BA058_06355	COG1846	Transcriptional regulator
BA058_06360	COG1566	PFAM secretion protein HlyD family protein
BA058_06365	COG2814	Major facilitator Superfamily
BA058_06380	COG1238	metal cluster binding
BA058_06385	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA058_06440	COG1546	Belongs to the CinA family
BA058_06445	COG2951	lytic endotransglycosylase activity
BA058_06450	COG3730	PTS system glucitol sorbitol-specific
BA058_06455	COG3732	PTS system glucitol sorbitol-specific
BA058_06465	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_06470	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_06475	COG1349	DNA-binding transcription factor activity
BA058_06480	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BA058_06480	COG0517	IMP dehydrogenase activity
BA058_06500	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BA058_06505	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_06510	COG1609	Transcriptional regulator
BA058_06515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_06515	COG1263	PTS System
BA058_06520	COG2723	6-phospho-beta-galactosidase activity
BA058_06525	COG5499	transcription regulator containing HTH domain
BA058_06530	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BA058_06540	COG3260	NADH ubiquinone oxidoreductase 20
BA058_06545	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BA058_06550	COG3261	NADH dehydrogenase
BA058_06550	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
BA058_06555	COG0650	Formate hydrogenlyase subunit 4
BA058_06560	COG0651	ATP synthesis coupled electron transport
BA058_06565	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_06580	COG0375	protein maturation
BA058_06585	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BA058_06590	COG0298	carbon dioxide binding
BA058_06595	COG0409	Hydrogenase expression formation protein
BA058_06600	COG0309	Hydrogenase expression formation protein (HypE)
BA058_06605	COG3604	Transcriptional regulator
BA058_06635	COG3335	DDE superfamily endonuclease
BA058_06675	COG1349	DNA-binding transcription factor activity
BA058_06680	COG2084	Dehydrogenase
BA058_06685	COG3395	kinase activity
BA058_06690	COG0235	Class ii aldolase
BA058_06695	COG3622	Belongs to the hyi family
BA058_06700	COG2610	gluconate transmembrane transporter activity
BA058_06715	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA058_06720	COG4942	peptidase
BA058_06720	COG1388	LysM domain
BA058_06775	COG2234	aminopeptidase activity
BA058_06800	COG0720	synthase
BA058_06805	COG0644	oxidoreductase
BA058_06810	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
BA058_06815	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BA058_06820	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BA058_06825	COG2086	electron transfer activity
BA058_06830	COG0477	Major facilitator Superfamily
BA058_06835	COG0277	FAD linked oxidase domain protein
BA058_06840	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_06845	COG2223	nitrite transmembrane transporter activity
BA058_06850	COG1070	Carbohydrate kinase
BA058_06880	COG0602	queuosine metabolic process
BA058_06890	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BA058_06900	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BA058_06915	COG3956	TIGRFAM MazG family protein
BA058_06920	COG2337	Toxic component of a toxin-antitoxin (TA) module
BA058_06925	COG2336	PFAM SpoVT AbrB
BA058_06930	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA058_06940	COG2205	protein histidine kinase activity
BA058_06940	COG3437	response regulator, receiver
BA058_06940	COG4999	Histidine kinase
BA058_06940	COG3850	Histidine kinase
BA058_06945	COG4948	Mandelate Racemase Muconate Lactonizing
BA058_06950	COG4948	Mandelate Racemase Muconate Lactonizing
BA058_06955	COG2271	Major facilitator Superfamily
BA058_06960	COG0716	FMN binding
BA058_06965	COG0564	pseudouridine synthase activity
BA058_06970	COG3098	single-species biofilm formation
BA058_06990	COG1611	Belongs to the LOG family
BA058_06995	COG0814	amino acid
BA058_07000	COG1760	l-serine dehydratase
BA058_07010	COG1454	alcohol dehydrogenase
BA058_07015	COG0235	Class ii aldolase
BA058_07020	COG0738	Major facilitator superfamily
BA058_07030	COG1070	Carbohydrate kinase
BA058_07040	COG1349	DNA-binding transcription factor activity
BA058_07050	COG2363	Small membrane protein
BA058_07055	COG0583	DNA-binding transcription factor activity
BA058_07065	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BA058_07070	COG2166	iron-sulfur cluster assembly
BA058_07075	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BA058_07080	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BA058_07120	COG2885	chlorophyll binding
BA058_07220	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BA058_07225	COG1263	PTS System
BA058_07225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_07230	COG3711	transcriptional antiterminator
BA058_07235	COG0860	N-Acetylmuramoyl-L-alanine amidase
BA058_07240	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BA058_07240	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BA058_07245	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BA058_07250	COG1074	ATP-dependent DNA helicase activity
BA058_07255	COG1025	Belongs to the peptidase M16 family
BA058_07260	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BA058_07265	COG4967	type IV pilus modification protein PilV
BA058_07275	COG4795	General secretion pathway protein
BA058_07280	COG2165	general secretion pathway protein
BA058_07295	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
BA058_07320	COG0861	Integral membrane protein TerC family
BA058_07330	COG0667	Aldo Keto reductase
BA058_07345	COG1609	Transcriptional regulator
BA058_07350	COG0019	diaminopimelate decarboxylase activity
BA058_07355	COG0583	DNA-binding transcription factor activity
BA058_07360	COG1794	racemase activity, acting on amino acids and derivatives
BA058_07365	COG2814	Major facilitator Superfamily
BA058_07370	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_07380	COG0183	Belongs to the thiolase family
BA058_07385	COG0814	amino acid
BA058_07395	COG4942	peptidase
BA058_07400	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BA058_07405	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BA058_07410	COG2080	2 iron, 2 sulfur cluster binding
BA058_07420	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BA058_07425	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BA058_07430	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BA058_07440	COG0549	Belongs to the carbamate kinase family
BA058_07445	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BA058_07445	COG3608	succinylglutamate desuccinylase aspartoacylase
BA058_07450	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BA058_07455	COG2068	MobA-Related Protein
BA058_07460	COG0493	'glutamate synthase
BA058_07460	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_07465	COG0402	S-adenosylhomocysteine deaminase activity
BA058_07470	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BA058_07475	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BA058_07475	COG2080	2 iron, 2 sulfur cluster binding
BA058_07480	COG2233	PERMEase
BA058_07485	COG0402	S-adenosylhomocysteine deaminase activity
BA058_07490	COG2252	PERMEase
BA058_07495	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_07510	COG2233	PERMEase
BA058_07525	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BA058_07535	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BA058_07540	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA058_07545	COG4974	Belongs to the 'phage' integrase family
BA058_07550	COG0716	FMN binding
BA058_07560	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BA058_07570	COG1272	protein, Hemolysin III
BA058_07580	COG2723	6-phospho-beta-galactosidase activity
BA058_07600	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA058_07605	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA058_07610	COG0006	proline dipeptidase activity
BA058_07630	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BA058_07640	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA058_07665	COG0583	DNA-binding transcription factor activity
BA058_07670	COG2968	Membrane
BA058_07675	COG1279	arginine transmembrane transporter activity
BA058_07680	COG0668	transmembrane transport
BA058_07685	COG0191	fructose-bisphosphate aldolase activity
BA058_07720	COG1122	ATPase activity
BA058_07725	COG1072	(Pantothenic acid kinase))
BA058_07735	COG1494	fructose-1,6-bisphosphatase
BA058_07740	COG1063	alcohol dehydrogenase
BA058_07745	COG2213	PTS system mannitol-specific
BA058_07750	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_07755	COG0330	HflC and HflK could
BA058_07760	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA058_07765	COG0501	Belongs to the peptidase M48B family
BA058_07780	COG1166	arginine decarboxylase activity
BA058_07805	COG2814	Major facilitator Superfamily
BA058_07815	COG2356	endonuclease I
BA058_07820	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BA058_07825	COG0189	ligase activity
BA058_07840	COG2805	Type II/IV secretion system protein
BA058_07845	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BA058_07850	COG0762	integral membrane protein
BA058_07860	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BA058_07865	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA058_07875	COG0252	asparaginase activity
BA058_07890	COG3171	Protein conserved in bacteria
BA058_07895	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BA058_07900	COG1194	a g-specific adenine glycosylase
BA058_07915	COG2211	Major facilitator Superfamily
BA058_07920	COG1982	Orn Lys Arg decarboxylase major
BA058_07925	COG1811	Na channel or pump
BA058_07935	COG0582	viral genome integration into host DNA
BA058_07945	COG2194	sulfuric ester hydrolase activity
BA058_07950	COG4372	Transposase
BA058_07955	COG3436	PFAM IS66 Orf2 family protein
BA058_07995	COG4584	PFAM Integrase catalytic
BA058_08000	COG1846	Transcriptional regulator
BA058_08020	COG3539	Fimbrial protein
BA058_08045	COG3539	Fimbrial protein
BA058_08085	COG1840	ABC-type Fe3 transport system, periplasmic component
BA058_08100	COG2963	transposase activity
BA058_08195	COG0204	Acyl-transferase
BA058_08205	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BA058_08220	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BA058_08225	COG1216	Glycosyl transferase, family 2
BA058_08250	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BA058_08260	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_08265	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BA058_08270	COG1609	Transcriptional regulator
BA058_08275	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_08285	COG3037	sugar-specific permease SgaT UlaA
BA058_08300	COG0738	Major facilitator superfamily
BA058_08305	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_08310	COG1349	DNA-binding transcription factor activity
BA058_08315	COG0440	acetolactate synthase activity
BA058_08320	COG0440	acetolactate synthase activity
BA058_08370	COG4983	Phage plasmid primase, P4 family domain protein
BA058_08380	COG3468	outer membrane autotransporter barrel domain protein
BA058_08385	COG2020	methyltransferase activity
BA058_08410	COG2003	Belongs to the UPF0758 family
BA058_08485	COG1215	transferase activity, transferring glycosyl groups
BA058_08495	COG0110	maltose O-acetyltransferase activity
BA058_08500	COG0562	UDP-galactopyranose mutase
BA058_08505	COG1216	Glycosyl transferase, family 2
BA058_08530	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA058_08545	COG4795	General secretion pathway protein
BA058_08560	COG2165	general secretion pathway protein
BA058_08565	COG1459	type II secretion system
BA058_08570	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA058_08590	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BA058_08595	COG3064	Membrane
BA058_08605	COG1620	l-lactate permease
BA058_08610	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BA058_08615	COG3193	protein, possibly involved in utilization of glycolate and propanediol
BA058_08620	COG0247	lactate metabolic process
BA058_08625	COG0277	FAD linked oxidase domain protein
BA058_08630	COG0277	FAD linked oxidase domain protein
BA058_08635	COG2186	Transcriptional regulator
BA058_08640	COG0456	acetyltransferase
BA058_08655	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BA058_08660	COG0156	8-amino-7-oxononanoate synthase activity
BA058_08670	COG0795	lipopolysaccharide-transporting ATPase activity
BA058_08675	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BA058_08685	COG2244	polysaccharide biosynthetic process
BA058_08690	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BA058_08695	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BA058_08700	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BA058_08705	COG0306	phosphate transporter
BA058_08710	COG0754	glutathionylspermidine amidase activity
BA058_08715	COG0625	glutathione transferase activity
BA058_08720	COG0298	carbon dioxide binding
BA058_08725	COG0375	protein maturation
BA058_08730	COG1773	rubredoxin
BA058_08735	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BA058_08740	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
BA058_08745	COG5557	Pfam Polysulphide reductase, NrfD
BA058_08750	COG0437	4 iron, 4 sulfur cluster binding
BA058_08755	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
BA058_08775	COG0667	Aldo Keto reductase
BA058_08785	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_08790	COG0848	biopolymer transport protein
BA058_08795	COG0811	peptide transport
BA058_08805	COG0626	cystathionine gamma-synthase activity
BA058_08810	COG0586	Pfam SNARE associated Golgi protein
BA058_08815	COG2207	Transcriptional regulator
BA058_08825	COG1979	alcohol dehydrogenase
BA058_08830	COG0656	L-ascorbic acid biosynthetic process
BA058_08840	COG4238	major outer membrane lipoprotein
BA058_08845	COG1032	radical SAM domain protein
BA058_08850	COG2186	Transcriptional regulator
BA058_08860	COG1063	alcohol dehydrogenase
BA058_08865	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BA058_08885	COG2132	Multicopper oxidase
BA058_08890	COG0204	Acyl-transferase
BA058_08895	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BA058_08900	COG4166	transmembrane transport
BA058_08905	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BA058_08910	COG3111	PFAM Bacterial OB fold (BOF) protein
BA058_08915	COG0745	RESPONSE REGULATOR receiver
BA058_08920	COG0642	Histidine kinase
BA058_08940	COG2249	NAD(P)H dehydrogenase (quinone) activity
BA058_08945	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BA058_08950	COG1737	Transcriptional regulator
BA058_08960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA058_08965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA058_08970	COG1120	ATPase activity
BA058_08975	COG4774	siderophore transport
BA058_08980	COG2211	Major facilitator Superfamily
BA058_09000	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_09020	COG0187	DNA topoisomerase II activity
BA058_09025	COG3150	esterase
BA058_09030	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BA058_09040	COG0494	nUDIX hydrolase
BA058_09045	COG1538	Outer membrane efflux protein
BA058_09060	COG0754	glutathionylspermidine amidase activity
BA058_09070	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BA058_09080	COG3384	dioxygenase
BA058_09110	COG1585	Membrane protein implicated in regulation of membrane protease activity
BA058_09115	COG2268	Band 7 protein
BA058_09130	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BA058_09135	COG3025	triphosphatase activity
BA058_09145	COG4991	sh3 domain protein
BA058_09160	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BA058_09170	COG0583	DNA-binding transcription factor activity
BA058_09175	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BA058_09185	COG0471	metal ion transport
BA058_09200	COG0358	DNA primase activity
BA058_09205	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA058_09220	COG2375	cellular response to nickel ion
BA058_09225	COG1695	Transcriptional regulator
BA058_09230	COG0840	transmembrane signaling receptor activity
BA058_09240	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA058_09245	COG1609	Transcriptional regulator
BA058_09250	COG3250	beta-galactosidase activity
BA058_09255	COG2731	YhcH YjgK YiaL family protein
BA058_09260	COG0531	amino acid
BA058_09270	COG3408	Glycogen debranching enzyme
BA058_09270	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
BA058_09275	COG1902	pentaerythritol trinitrate reductase activity
BA058_09275	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA058_09280	COG5499	transcription regulator containing HTH domain
BA058_09285	COG4680	protein conserved in bacteria
BA058_09295	COG1451	nucleotide metabolic process
BA058_09300	COG2949	membrane
BA058_09305	COG0673	inositol 2-dehydrogenase activity
BA058_09310	COG0861	Integral membrane protein TerC family
BA058_09325	COG2721	sulfolactate sulfo-lyase activity
BA058_09335	COG2271	Major facilitator Superfamily
BA058_09360	COG2186	Transcriptional regulator
BA058_09365	COG0586	Pfam SNARE associated Golgi protein
BA058_09375	COG1422	Protein of unknown function (DUF1090)
BA058_09380	COG4575	ribosome binding
BA058_09385	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
BA058_09395	COG2259	Doxx family
BA058_09400	COG0435	Glutathione S-transferase
BA058_09405	COG3152	Membrane
BA058_09410	COG0583	DNA-binding transcription factor activity
BA058_09415	COG1741	Belongs to the pirin family
BA058_09430	COG0814	amino acid
BA058_09435	COG1760	l-serine dehydratase
BA058_09440	COG0251	oxidation-reduction process
BA058_09445	COG1882	Formate acetyltransferase
BA058_09450	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA058_09460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BA058_09465	COG0583	DNA-binding transcription factor activity
BA058_09480	COG1929	Belongs to the glycerate kinase type-1 family
BA058_09485	COG2084	Dehydrogenase
BA058_09495	COG2271	Major facilitator Superfamily
BA058_09500	COG2721	sulfolactate sulfo-lyase activity
BA058_09505	COG2002	toxin-antitoxin pair type II binding
BA058_09515	COG1349	DNA-binding transcription factor activity
BA058_09525	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_09535	COG3716	PTS system mannose fructose sorbose family IID component
BA058_09540	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_09545	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BA058_09550	COG2222	sugar isomerase
BA058_09560	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_09565	COG3715	PTS system
BA058_09570	COG3716	PTS system mannose fructose sorbose family IID component
BA058_09575	COG0363	glucosamine-6-phosphate deaminase activity
BA058_09580	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BA058_09585	COG3107	peptidoglycan biosynthetic process
BA058_09600	COG2823	Periplasmic or secreted lipoprotein
BA058_09605	COG0701	Predicted permease
BA058_09610	COG0702	epimerase
BA058_09615	COG0693	protein deglycase activity
BA058_09630	COG3153	acetyltransferase
BA058_09650	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BA058_09655	COG0814	amino acid
BA058_09665	COG0513	Belongs to the DEAD box helicase family
BA058_09670	COG4785	May be involved in cell division
BA058_09685	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BA058_09700	COG0195	Participates in both transcription termination and antitermination
BA058_09735	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA058_09745	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BA058_09750	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BA058_09760	COG1534	Rna-binding protein
BA058_09765	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA058_09770	COG2027	D-alanyl-D-alanine carboxypeptidase
BA058_09780	COG0697	spore germination
BA058_09795	COG0142	geranyltranstransferase activity
BA058_09800	COG3423	Transcriptional regulator
BA058_09810	COG5007	Belongs to the BolA IbaG family
BA058_09815	COG3113	response to antibiotic
BA058_09820	COG2854	intermembrane phospholipid transfer
BA058_09825	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BA058_09830	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BA058_09835	COG1127	ABC transporter
BA058_09840	COG0530	calcium, potassium:sodium antiporter activity
BA058_09845	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BA058_09845	COG0517	IMP dehydrogenase activity
BA058_09850	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BA058_09855	COG3117	lipopolysaccharide transmembrane transporter activity
BA058_09860	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BA058_09865	COG1137	ATPase activity
BA058_09870	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BA058_09875	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA058_09880	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_09890	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_09895	COG0515	serine threonine protein kinase
BA058_09905	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BA058_09910	COG5002	protein histidine kinase activity
BA058_09910	COG2198	Histidine kinase
BA058_09910	COG0784	Response regulator, receiver
BA058_09915	COG1242	4 iron, 4 sulfur cluster binding
BA058_09920	COG0069	glutamate synthase activity
BA058_09920	COG0070	glutamate synthase
BA058_09920	COG0067	glutamate synthase
BA058_09925	COG0493	'glutamate synthase
BA058_09930	COG4804	nuclease activity
BA058_09935	COG2731	YhcH YjgK YiaL family protein
BA058_09965	COG2969	positive regulation of protein catabolic process
BA058_09970	COG0625	glutathione transferase activity
BA058_09985	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BA058_09990	COG3105	Protein conserved in bacteria
BA058_09995	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BA058_10000	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BA058_10020	COG2732	(Barnase) inhibitor
BA058_10040	COG0583	DNA-binding transcription factor activity
BA058_10045	COG0312	modulator of DNA gyrase
BA058_10050	COG3164	Protein of unknown function
BA058_10055	COG1530	ribonuclease E activity
BA058_10065	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BA058_10070	COG1792	Involved in formation and maintenance of cell shape
BA058_10075	COG1077	Cell shape determining protein MreB Mrl
BA058_10085	COG2200	EAL domain
BA058_10085	COG2199	diguanylate cyclase activity
BA058_10090	COG0604	alcohol dehydrogenase
BA058_10105	COG0511	ligase activity, forming carbon-carbon bonds
BA058_10110	COG0439	Biotin carboxylase
BA058_10120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_10125	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA058_10130	COG1129	ABC transporter
BA058_10135	COG1879	ABC-type sugar transport system periplasmic component
BA058_10140	COG0191	fructose-bisphosphate aldolase activity
BA058_10145	COG1349	DNA-binding transcription factor activity
BA058_10150	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_10155	COG3924	membrane
BA058_10160	COG4145	pantothenate transmembrane transporter activity
BA058_10170	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA058_10180	COG2189	Belongs to the N(4) N(6)-methyltransferase family
BA058_10190	COG1309	transcriptional regulator
BA058_10195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_10200	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA058_10220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_10225	COG4597	amino acid ABC transporter
BA058_10230	COG0765	amino acid transport
BA058_10235	COG1126	abc transporter atp-binding protein
BA058_10275	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BA058_10295	COG0551	DNA topoisomerase type I activity
BA058_10305	COG0758	DNA mediated transformation
BA058_10325	COG0569	domain protein
BA058_10335	COG3036	rescue of stalled ribosome
BA058_10340	COG0789	Transcriptional regulator
BA058_10370	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BA058_10380	COG0201	protein transport
BA058_10470	COG0089	rRNA binding
BA058_10495	COG3409	Peptidoglycan-binding domain 1 protein
BA058_10495	COG3267	Type II secretory pathway component ExeA
BA058_10500	COG3031	protein transport across the cell outer membrane
BA058_10505	COG1450	Type ii and iii secretion system protein
BA058_10510	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA058_10515	COG1459	type II secretion system
BA058_10520	COG2165	general secretion pathway protein
BA058_10525	COG2165	general secretion pathway protein
BA058_10530	COG2165	general secretion pathway protein
BA058_10535	COG4795	General secretion pathway protein
BA058_10540	COG3156	type II secretion system protein K
BA058_10545	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA058_10550	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA058_10555	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BA058_10560	COG2193	ferroxidase activity
BA058_10565	COG2906	2 iron, 2 sulfur cluster binding
BA058_10570	COG3979	chitinase
BA058_10610	COG2964	Protein conserved in bacteria
BA058_10615	COG0545	Peptidyl-prolyl cis-trans isomerase
BA058_10625	COG1047	Peptidyl-prolyl cis-trans
BA058_10630	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
BA058_10645	COG0488	(ABC) transporter
BA058_10650	COG0429	hydrolase of the alpha beta-hydrolase fold
BA058_10660	COG3954	Phosphoribulokinase
BA058_10665	COG1765	OsmC-like protein
BA058_10675	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA058_10680	COG1289	transmembrane transporter activity
BA058_10685	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BA058_10690	COG0512	Glutamine amidotransferase of anthranilate synthase
BA058_10695	COG2184	nucleotidyltransferase activity
BA058_10705	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA058_10715	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA058_10720	COG2146	nitrite reductase [NAD(P)H] activity
BA058_10725	COG2116	formate transmembrane transporter activity
BA058_10740	COG0626	cystathionine gamma-synthase activity
BA058_10755	COG1735	metal-dependent hydrolase with the TIM-barrel fold
BA058_10760	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BA058_10765	COG3457	Alanine racemase
BA058_10775	COG2188	Transcriptional regulator
BA058_10780	COG0180	Tryptophanyl-tRNA synthetase
BA058_10790	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BA058_10795	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BA058_10800	COG3266	domain, Protein
BA058_10815	COG4796	Type ii and iii secretion system protein
BA058_10830	COG3166	PFAM Fimbrial assembly family protein
BA058_10835	COG4972	Pilus assembly protein
BA058_10840	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BA058_10845	COG0494	nUDIX hydrolase
BA058_10855	COG1011	Hydrolase
BA058_10860	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BA058_10885	COG2205	protein histidine kinase activity
BA058_10890	COG0745	RESPONSE REGULATOR receiver
BA058_10895	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA058_10900	COG2183	response to ionizing radiation
BA058_10905	COG1918	ferrous iron import across plasma membrane
BA058_10910	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BA058_10920	COG5464	transposase or invertase
BA058_10930	COG1040	competence protein
BA058_10940	COG2610	gluconate transmembrane transporter activity
BA058_10945	COG1640	4-alpha-glucanotransferase
BA058_10950	COG0058	SHG alpha-glucan phosphorylase activity
BA058_10965	COG1690	Belongs to the RtcB family
BA058_10970	COG4650	regulator
BA058_10975	COG1349	DNA-binding transcription factor activity
BA058_10990	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BA058_11030	COG3188	usher protein
BA058_11035	COG3121	Chaperone
BA058_11045	COG0058	SHG alpha-glucan phosphorylase activity
BA058_11070	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA058_11075	COG2095	MarC family integral membrane protein
BA058_11085	COG0514	ATP-dependent DNA helicase (RecQ)
BA058_11090	COG2610	gluconate transmembrane transporter activity
BA058_11095	COG3265	gluconokinase activity
BA058_11100	COG1609	Transcriptional regulator
BA058_11105	COG1741	Belongs to the pirin family
BA058_11110	COG0673	inositol 2-dehydrogenase activity
BA058_11120	COG1247	-acetyltransferase
BA058_11125	COG3157	Type VI secretion system effector, Hcp
BA058_11140	COG0405	Gamma-glutamyltransferase
BA058_11150	COG0584	glycerophosphoryl diester phosphodiesterase
BA058_11180	COG0410	ABC transporter
BA058_11185	COG0411	ABC transporter
BA058_11190	COG4177	L-phenylalanine transmembrane transporter activity
BA058_11195	COG0559	Belongs to the binding-protein-dependent transport system permease family
BA058_11200	COG0683	leucine binding
BA058_11205	COG0456	acetyltransferase
BA058_11215	COG0683	leucine binding
BA058_11220	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA058_11225	COG2177	Part of the ABC transporter FtsEX involved in
BA058_11230	COG2884	Cell division ATP-binding protein ftsE
BA058_11235	COG0552	protein localization to endoplasmic reticulum
BA058_11240	COG0742	ribosomal rna small subunit methyltransferase
BA058_11245	COG3776	membrane
BA058_11255	COG3714	YhhN family
BA058_11270	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BA058_11280	COG0477	Major facilitator Superfamily
BA058_11285	COG0628	permease
BA058_11290	COG2091	lysine biosynthetic process via aminoadipic acid
BA058_11295	COG0747	negative chemotaxis
BA058_11300	COG0601	transmembrane transport
BA058_11305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA058_11325	COG0842	Transport permease protein
BA058_11330	COG1129	ABC transporter
BA058_11330	COG0842	Transport permease protein
BA058_11335	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_11345	COG2081	HI0933 family
BA058_11350	COG0306	phosphate transporter
BA058_11360	COG0589	response to stress
BA058_11365	COG3104	oligopeptide transport
BA058_11375	COG0339	signal peptide processing
BA058_11380	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BA058_11385	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA058_11400	COG1393	Belongs to the ArsC family
BA058_11405	COG3065	identical protein binding
BA058_11410	COG2197	response regulator
BA058_11415	COG3720	iron ion transport
BA058_11420	COG4771	TonB-dependent receptor
BA058_11440	COG3721	Heme iron utilization protein
BA058_11450	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA058_11460	COG1285	pathogenesis
BA058_11475	COG3247	response to pH
BA058_11480	COG2771	luxR family
BA058_11490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_11495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA058_11500	COG2207	Transcriptional regulator
BA058_11510	COG0076	glutamate decarboxylase activity
BA058_11515	COG1858	cytochrome C peroxidase
BA058_11525	COG2197	response regulator
BA058_11530	COG0583	DNA-binding transcription factor activity
BA058_11535	COG1295	ribonuclease BN
BA058_11540	COG0477	Major facilitator Superfamily
BA058_11545	COG2982	Protein involved in outer membrane biogenesis
BA058_11550	COG2200	EAL domain
BA058_11560	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_11565	COG0612	Peptidase, M16
BA058_11575	COG2200	EAL domain
BA058_11575	COG2199	diguanylate cyclase activity
BA058_11580	COG3118	belongs to the thioredoxin family
BA058_11580	COG0457	Tetratricopeptide repeat
BA058_11585	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BA058_11590	COG1215	transferase activity, transferring glycosyl groups
BA058_11595	COG1215	transferase activity, transferring glycosyl groups
BA058_11620	COG2194	sulfuric ester hydrolase activity
BA058_11635	COG0814	amino acid
BA058_11640	COG4608	Belongs to the ABC transporter superfamily
BA058_11645	COG0444	Belongs to the ABC transporter superfamily
BA058_11650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA058_11655	COG0601	transmembrane transport
BA058_11665	COG0747	negative chemotaxis
BA058_11680	COG2194	sulfuric ester hydrolase activity
BA058_11685	COG2223	nitrite transmembrane transporter activity
BA058_11690	COG5571	outer membrane autotransporter
BA058_11695	COG2818	Glycosylase
BA058_11700	COG0456	acetyltransferase
BA058_11705	COG0243	molybdopterin cofactor binding
BA058_11710	COG2885	chlorophyll binding
BA058_11725	COG2944	sequence-specific DNA binding
BA058_11730	COG1278	Cold shock
BA058_11755	COG3274	enterobacterial common antigen metabolic process
BA058_11760	COG4682	membrane
BA058_11765	COG4682	membrane
BA058_11770	COG1070	Carbohydrate kinase
BA058_11780	COG4213	ABC transporter substrate-binding protein
BA058_11790	COG4214	carbohydrate transport
BA058_11795	COG1609	Transcriptional regulator
BA058_11795	COG2207	Transcriptional regulator
BA058_11800	COG2992	FlgJ-related protein
BA058_11805	COG0366	Alpha amylase catalytic
BA058_11810	COG3977	Valine--pyruvate aminotransferase
BA058_11820	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA058_11825	COG1414	Transcriptional regulator
BA058_11835	COG2731	YhcH YjgK YiaL family protein
BA058_11845	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA058_11850	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA058_11855	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA058_11860	COG1070	Carbohydrate kinase
BA058_11865	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BA058_11870	COG3623	hexulose-6-phosphate isomerase
BA058_11875	COG0235	Class ii aldolase
BA058_11880	COG1012	belongs to the aldehyde dehydrogenase family
BA058_11885	COG1454	alcohol dehydrogenase
BA058_11890	COG3276	selenocysteine insertion sequence binding
BA058_11900	COG0625	glutathione transferase activity
BA058_11905	COG1566	PFAM secretion protein HlyD family protein
BA058_11915	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_11915	COG2213	PTS system mannitol-specific
BA058_11925	COG3722	fumarate hydratase activity
BA058_11945	COG5295	Hep Hag repeat protein
BA058_11950	COG1620	l-lactate permease
BA058_11955	COG2186	Transcriptional regulator
BA058_11965	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BA058_11970	COG1045	serine acetyltransferase
BA058_11985	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA058_11990	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA058_12000	COG4942	peptidase
BA058_12005	COG2861	carbohydrate metabolic process
BA058_12010	COG1216	Glycosyl transferase, family 2
BA058_12020	COG0156	8-amino-7-oxononanoate synthase activity
BA058_12030	COG0859	PFAM glycosyl transferase family 9
BA058_12035	COG0859	PFAM glycosyl transferase family 9
BA058_12040	COG3307	-O-antigen
BA058_12045	COG1216	Glycosyl transferase, family 2
BA058_12050	COG1442	glycosyl transferase family 8
BA058_12055	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BA058_12070	COG0515	serine threonine protein kinase
BA058_12075	COG0438	transferase activity, transferring glycosyl groups
BA058_12080	COG0859	PFAM glycosyl transferase family 9
BA058_12085	COG1519	Transferase
BA058_12115	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BA058_12140	COG1561	YicC-like family, N-terminal region
BA058_12145	COG3645	SOS response
BA058_12150	COG2860	membrane
BA058_12170	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA058_12175	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA058_12180	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BA058_12185	COG0786	glutamate:sodium symporter activity
BA058_12190	COG2233	PERMEase
BA058_12195	COG2982	Protein involved in outer membrane biogenesis
BA058_12205	COG1940	carbohydrate kinase activity
BA058_12210	COG0191	fructose-bisphosphate aldolase activity
BA058_12220	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_12220	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_12225	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_12230	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_12230	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_12230	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_12235	COG3711	transcriptional antiterminator
BA058_12240	COG1501	Belongs to the glycosyl hydrolase 31 family
BA058_12245	COG2211	Major facilitator Superfamily
BA058_12255	COG0582	viral genome integration into host DNA
BA058_12335	COG0697	spore germination
BA058_12340	COG1464	Belongs to the NlpA lipoprotein family
BA058_12365	COG2252	PERMEase
BA058_12375	COG2271	Major facilitator Superfamily
BA058_12380	COG2271	Major facilitator Superfamily
BA058_12385	COG3851	Histidine kinase
BA058_12390	COG2197	response regulator
BA058_12405	COG0440	acetolactate synthase activity
BA058_12410	COG0028	Belongs to the TPP enzyme family
BA058_12420	COG2814	Major facilitator Superfamily
BA058_12425	COG0641	radical SAM
BA058_12435	COG2149	membrane
BA058_12440	COG3119	arylsulfatase activity
BA058_12445	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA058_12450	COG2207	Transcriptional regulator
BA058_12470	COG5645	(Lipo)protein
BA058_12475	COG0823	Involved in the tonB-independent uptake of proteins
BA058_12485	COG2271	Major facilitator Superfamily
BA058_12495	COG0800	Aldolase
BA058_12500	COG3734	2-keto-3-deoxy-galactonokinase
BA058_12505	COG2186	Transcriptional regulator
BA058_12515	COG0561	phosphatase activity
BA058_12520	COG3753	Protein conserved in bacteria
BA058_12530	COG0187	DNA topoisomerase II activity
BA058_12540	COG0592	DNA-directed DNA polymerase activity
BA058_12585	COG0814	amino acid
BA058_12595	COG0583	DNA-binding transcription factor activity
BA058_12600	COG2091	lysine biosynthetic process via aminoadipic acid
BA058_12605	COG0431	NADPH-dependent FMN reductase
BA058_12610	COG2252	PERMEase
BA058_12615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA058_12625	COG0363	glucosamine-6-phosphate deaminase activity
BA058_12640	COG2723	6-phospho-beta-galactosidase activity
BA058_12645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_12645	COG1263	PTS System
BA058_12645	COG2190	(PTS) system
BA058_12650	COG3711	transcriptional antiterminator
BA058_12655	COG0704	Plays a role in the regulation of phosphate uptake
BA058_12660	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BA058_12665	COG0581	inorganic phosphate transmembrane transporter activity
BA058_12670	COG0573	inorganic phosphate transmembrane transporter activity
BA058_12675	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BA058_12680	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BA058_12730	COG3312	ion transport
BA058_12745	COG0716	FMN binding
BA058_12750	COG1522	sequence-specific DNA binding
BA058_12785	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA058_12790	COG1879	ABC-type sugar transport system periplasmic component
BA058_12795	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_12800	COG1609	Transcriptional regulator
BA058_12805	COG0477	Major facilitator Superfamily
BA058_12810	COG2186	Transcriptional regulator
BA058_12850	COG3085	chromosome segregation
BA058_12855	COG0606	chelatase, subunit chli
BA058_12870	COG3978	acetolactate synthase activity
BA058_12875	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA058_12885	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BA058_12890	COG0583	DNA-binding transcription factor activity
BA058_12900	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA058_12905	COG0210	DNA helicase
BA058_12920	COG3118	belongs to the thioredoxin family
BA058_12930	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BA058_12940	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BA058_12945	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
BA058_12950	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BA058_12955	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BA058_12960	COG1088	dTDP-glucose 4,6-dehydratase activity
BA058_12965	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BA058_12970	COG0456	acetyltransferase
BA058_12975	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BA058_12980	COG2244	polysaccharide biosynthetic process
BA058_13000	COG1113	amino acid transport
BA058_13025	COG0641	radical SAM
BA058_13030	COG3119	arylsulfatase activity
BA058_13035	COG3071	HemY protein
BA058_13040	COG2959	enzyme of heme biosynthesis
BA058_13045	COG1587	Uroporphyrinogen-III synthase
BA058_13050	COG0181	hydroxymethylbilane synthase activity
BA058_13055	COG3072	Adenylate cyclase
BA058_13065	COG5567	small periplasmic lipoprotein
BA058_13075	COG3159	Protein conserved in bacteria
BA058_13085	COG1011	Hydrolase
BA058_13090	COG0210	DNA helicase
BA058_13095	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
BA058_13100	COG3698	Phosphodiester glycosidase
BA058_13110	COG0598	Magnesium transport protein CorA
BA058_13125	COG2962	Rard protein
BA058_13130	COG2050	protein possibly involved in aromatic compounds catabolism
BA058_13135	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
BA058_13140	COG0514	ATP-dependent DNA helicase (RecQ)
BA058_13145	COG1280	lysine exporter protein (LysE YggA)
BA058_13150	COG1280	lysine exporter protein (LysE YggA)
BA058_13155	COG2267	carboxylic ester hydrolase activity
BA058_13160	COG0561	phosphatase activity
BA058_13170	COG0583	DNA-binding transcription factor activity
BA058_13190	COG3157	Type VI secretion system effector, Hcp
BA058_13200	COG1263	PTS System
BA058_13200	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_13200	COG2190	(PTS) system
BA058_13205	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA058_13210	COG1737	Transcriptional regulator
BA058_13215	COG0583	DNA-binding transcription factor activity
BA058_13220	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BA058_13230	COG0549	Belongs to the carbamate kinase family
BA058_13235	COG1304	FMN binding
BA058_13240	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BA058_13250	COG1335	isochorismatase
BA058_13260	COG0412	Dienelactone hydrolase
BA058_13265	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
BA058_13285	COG0800	Aldolase
BA058_13290	COG3734	2-keto-3-deoxy-galactonokinase
BA058_13295	COG1414	Transcriptional regulator
BA058_13300	COG1322	Protein conserved in bacteria
BA058_13310	COG3165	ubiquinone biosynthetic process from chorismate
BA058_13320	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BA058_13330	COG0805	protein transport
BA058_13345	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BA058_13350	COG0543	2 iron, 2 sulfur cluster binding
BA058_13370	COG1739	Uncharacterized protein family UPF0029
BA058_13375	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA058_13380	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
BA058_13410	COG1763	Mo-molybdopterin cofactor biosynthetic process
BA058_13415	COG0746	molybdenum cofactor guanylyltransferase activity
BA058_13420	COG3084	Protein conserved in bacteria
BA058_13425	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BA058_13435	COG5339	Protein conserved in bacteria
BA058_13440	COG0204	Acyl-transferase
BA058_13450	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA058_13450	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA058_13465	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA058_13475	COG2204	response regulator
BA058_13480	COG3852	Histidine kinase
BA058_13485	COG0174	glutamine synthetase
BA058_13500	COG2188	Transcriptional regulator
BA058_13505	COG1082	Xylose isomerase domain protein TIM barrel
BA058_13510	COG2271	Major facilitator Superfamily
BA058_13515	COG1349	DNA-binding transcription factor activity
BA058_13520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_13525	COG2084	Dehydrogenase
BA058_13530	COG3684	Belongs to the aldolase LacD family
BA058_13535	COG1063	alcohol dehydrogenase
BA058_13545	COG0477	Major facilitator Superfamily
BA058_13555	COG1011	Hydrolase
BA058_13570	COG0456	acetyltransferase
BA058_13580	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
BA058_13605	COG2864	formate dehydrogenase
BA058_13610	COG0437	4 iron, 4 sulfur cluster binding
BA058_13615	COG0243	molybdopterin cofactor binding
BA058_13615	COG3383	formate dehydrogenase (NAD+) activity
BA058_13620	COG3383	formate dehydrogenase (NAD+) activity
BA058_13620	COG0243	molybdopterin cofactor binding
BA058_13680	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BA058_13695	COG2258	MOSC domain
BA058_13700	COG2205	protein histidine kinase activity
BA058_13705	COG0745	RESPONSE REGULATOR receiver
BA058_13710	COG3678	ATP-independent chaperone mediated protein folding
BA058_13725	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BA058_13745	COG3152	Membrane
BA058_13750	COG3691	Protein conserved in bacteria
BA058_13755	COG0589	response to stress
BA058_13765	COG1494	fructose-1,6-bisphosphatase
BA058_13775	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BA058_13790	COG1575	Belongs to the MenA family. Type 1 subfamily
BA058_13805	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA058_13810	COG1609	Transcriptional regulator
BA058_13815	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BA058_13825	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
BA058_13835	COG0626	cystathionine gamma-synthase activity
BA058_13840	COG0460	homoserine dehydrogenase
BA058_13840	COG0527	aspartate kinase activity
BA058_13845	COG3248	Nucleoside-binding outer membrane protein
BA058_13855	COG0737	Belongs to the 5'-nucleotidase family
BA058_13865	COG0737	Belongs to the 5'-nucleotidase family
BA058_13870	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BA058_13880	COG0697	spore germination
BA058_13885	COG3738	Protein conserved in bacteria
BA058_13895	COG0371	Dehydrogenase
BA058_13900	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BA058_13905	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_13905	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA058_13905	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_13910	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_13915	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_13925	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA058_13930	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA058_13935	COG2207	Transcriptional regulator
BA058_13940	COG2194	sulfuric ester hydrolase activity
BA058_13955	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BA058_13970	COG4948	Mandelate Racemase Muconate Lactonizing
BA058_13975	COG2271	Major facilitator Superfamily
BA058_13980	COG0583	DNA-binding transcription factor activity
BA058_13990	COG1473	amidohydrolase
BA058_13995	COG0477	Major facilitator Superfamily
BA058_14045	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BA058_14050	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BA058_14050	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BA058_14090	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA058_14095	COG0250	Participates in transcription elongation, termination and antitermination
BA058_14130	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BA058_14140	COG2104	thiamine diphosphate biosynthetic process
BA058_14145	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA058_14180	COG3068	Protein conserved in bacteria
BA058_14185	COG0776	regulation of translation
BA058_14195	COG3678	ATP-independent chaperone mediated protein folding
BA058_14200	COG4191	Histidine kinase
BA058_14205	COG2204	response regulator
BA058_14210	COG0151	Belongs to the GarS family
BA058_14245	COG0456	acetyltransferase
BA058_14255	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BA058_14260	COG2224	Isocitrate lyase
BA058_14270	COG1414	Transcriptional regulator
BA058_14275	COG0646	methionine synthase
BA058_14275	COG1410	methionine synthase
BA058_14290	COG1283	sodium-dependent phosphate transmembrane transporter activity
BA058_14340	COG1187	pseudouridine synthase activity
BA058_14350	COG0527	aspartate kinase activity
BA058_14375	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA058_14395	COG3833	ABC-type maltose transport systems, permease component
BA058_14400	COG1175	transmembrane transport
BA058_14405	COG2182	Extracellular solute-binding protein
BA058_14445	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BA058_14455	COG0534	Mate efflux family protein
BA058_14460	COG3237	CsbD-like
BA058_14465	COG0735	belongs to the Fur family
BA058_14525	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BA058_14530	COG5532	Uncharacterized conserved protein (DUF2303)
BA058_14570	COG1846	Transcriptional regulator
BA058_14575	COG4725	Belongs to the MT-A70-like family
BA058_14580	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BA058_14585	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
BA058_14595	COG1403	HNH endonuclease
BA058_14600	COG0484	heat shock protein binding
BA058_14615	COG3179	chitinase
BA058_14640	COG4626	Terminase
BA058_14640	COG1802	Transcriptional regulator
BA058_14685	COG4386	tail sheath protein
BA058_14710	COG4228	DNA circulation
BA058_14730	COG3299	homolog of phage Mu protein gp47
BA058_14735	COG3778	Protein conserved in bacteria
BA058_14760	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA058_14770	COG0604	alcohol dehydrogenase
BA058_14775	COG0305	Participates in initiation and elongation during chromosome replication
BA058_14785	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BA058_14790	COG3201	nicotinamide mononucleotide transporter
BA058_14800	COG1448	Aminotransferase
BA058_14805	COG0567	Dehydrogenase, E1 component
BA058_14815	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA058_14820	COG0045	succinate-CoA ligase (ADP-forming) activity
BA058_14825	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BA058_14830	COG0471	metal ion transport
BA058_14835	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BA058_14840	COG2204	response regulator
BA058_14850	COG3700	Belongs to the class B bacterial acid phosphatase family
BA058_14855	COG0432	Pfam Uncharacterised protein family UPF0047
BA058_14860	COG2315	Protein conserved in bacteria
BA058_14865	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BA058_14870	COG0629	single-stranded DNA binding
BA058_14880	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BA058_14885	COG2207	Transcriptional regulator
BA058_14890	COG0789	Transcriptional regulator
BA058_14895	COG2252	PERMEase
BA058_14900	COG0025	NhaP-type Na H and K H
BA058_14910	COG1380	Effector of murein hydrolase LrgA
BA058_14915	COG1346	cytolysis
BA058_14925	COG3162	membrane
BA058_14930	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA058_14940	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
BA058_14945	COG0437	4 iron, 4 sulfur cluster binding
BA058_14950	COG3301	Polysulphide reductase, NrfD
BA058_14955	COG1138	Cytochrome C-type biogenesis protein
BA058_14960	COG3088	subunit of a heme lyase
BA058_14965	COG4235	cytochrome complex assembly
BA058_14970	COG1301	dicarboxylic acid transport
BA058_14980	COG2801	Transposase and inactivated derivatives
BA058_14985	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BA058_14990	COG4608	Belongs to the ABC transporter superfamily
BA058_14995	COG0444	Belongs to the ABC transporter superfamily
BA058_15005	COG0601	transmembrane transport
BA058_15015	COG3383	formate dehydrogenase (NAD+) activity
BA058_15020	COG3383	formate dehydrogenase (NAD+) activity
BA058_15030	COG1289	transmembrane transporter activity
BA058_15035	COG1566	PFAM secretion protein HlyD family protein
BA058_15045	COG2015	COG2015, Alkyl sulfatase and related hydrolases
BA058_15050	COG1940	carbohydrate kinase activity
BA058_15055	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BA058_15060	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA058_15065	COG1129	ABC transporter
BA058_15070	COG1879	ABC-type sugar transport system periplasmic component
BA058_15075	COG1737	Transcriptional regulator
BA058_15080	COG0698	ribose 5-phosphate isomerase
BA058_15090	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BA058_15095	COG0456	acetyltransferase
BA058_15105	COG3454	Phosphonate metabolism
BA058_15110	COG4778	phosphonate C-P lyase system protein PhnL
BA058_15115	COG4107	phosphonate C-P lyase system protein PhnK
BA058_15120	COG3627	carbon phosphorus lyase activity
BA058_15125	COG3626	phosphonate metabolism
BA058_15130	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BA058_15135	COG3624	Phosphonate C-P lyase system protein PhnG
BA058_15140	COG2188	Transcriptional regulator
BA058_15145	COG3639	organic phosphonate transmembrane transporter activity
BA058_15150	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
BA058_15160	COG2764	glyoxalase bleomycin resistance protein dioxygenase
BA058_15165	COG2824	Alkylphosphonate utilization operon protein PhnA
BA058_15180	COG0477	Major facilitator Superfamily
BA058_15190	COG0642	Histidine kinase
BA058_15195	COG0745	RESPONSE REGULATOR receiver
BA058_15200	COG2194	sulfuric ester hydrolase activity
BA058_15205	COG0531	amino acid
BA058_15210	COG2207	Transcriptional regulator
BA058_15215	COG1982	Orn Lys Arg decarboxylase major
BA058_15220	COG2169	Transcriptional regulator
BA058_15230	COG1486	melibiose metabolic process
BA058_15235	COG3647	Membrane
BA058_15240	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BA058_15240	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BA058_15245	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA058_15255	COG4565	transcriptional regulatory protein
BA058_15260	COG3290	protein histidine kinase activity
BA058_15265	COG3592	Divergent 4Fe-4S mono-cluster
BA058_15270	COG2388	GCN5-related N-acetyl-transferase
BA058_15285	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BA058_15290	COG3104	oligopeptide transport
BA058_15295	COG1982	Orn Lys Arg decarboxylase major
BA058_15300	COG0531	amino acid
BA058_15305	COG3710	Transcriptional regulator
BA058_15320	COG1309	transcriptional regulator
BA058_15335	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA058_15340	COG1027	Aspartate ammonia-lyase
BA058_15345	COG3030	protein affecting phage T7 exclusion by the F plasmid
BA058_15350	COG0531	amino acid
BA058_15375	COG1509	lysine 2,3-aminomutase activity
BA058_15385	COG5510	response to toxic substance
BA058_15390	COG5510	response to toxic substance
BA058_15395	COG2076	Multidrug Resistance protein
BA058_15400	COG3040	lipid binding
BA058_15405	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BA058_15420	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BA058_15425	COG1053	succinate dehydrogenase
BA058_15435	COG0531	amino acid
BA058_15440	COG3264	Mechanosensitive ion channel
BA058_15440	COG1511	domain protein
BA058_15475	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BA058_15480	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BA058_15480	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BA058_15485	COG0802	atpase or kinase
BA058_15490	COG0860	N-Acetylmuramoyl-L-alanine amidase
BA058_15510	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BA058_15515	COG0330	HflC and HflK could
BA058_15520	COG0330	HflC and HflK could
BA058_15525	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BA058_15540	COG0557	exoribonuclease II activity
BA058_15545	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA058_15550	COG3789	protein conserved in bacteria
BA058_15555	COG1842	Phage shock protein A
BA058_15565	COG3766	membrane
BA058_15570	COG5463	Belongs to the UPF0441 family
BA058_15575	COG0754	glutathionylspermidine amidase activity
BA058_15580	COG1960	acyl-CoA dehydrogenase activity
BA058_15590	COG3650	response to hydrogen peroxide
BA058_15595	COG1073	alpha beta
BA058_15610	COG3037	sugar-specific permease SgaT UlaA
BA058_15615	COG3414	Phosphotransferase system galactitol-specific IIB component
BA058_15680	COG2271	Major facilitator Superfamily
BA058_15685	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BA058_15690	COG4670	ketone body catabolic process
BA058_15695	COG1024	Enoyl-CoA hydratase
BA058_15710	COG1309	transcriptional regulator
BA058_15715	COG3061	Opacity-associated protein A
BA058_15720	COG0545	Peptidyl-prolyl cis-trans isomerase
BA058_15725	COG1113	amino acid transport
BA058_15735	COG0697	spore germination
BA058_15740	COG0702	epimerase
BA058_15745	COG1733	regulation of RNA biosynthetic process
BA058_15750	COG0737	Belongs to the 5'-nucleotidase family
BA058_15755	COG1218	3'(2'),5'-bisphosphate nucleotidase
BA058_15760	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BA058_15770	COG1253	flavin adenine dinucleotide binding
BA058_15785	COG0729	surface antigen
BA058_15790	COG2911	Protein conserved in bacteria
BA058_15795	COG2105	PFAM AIG2 family protein
BA058_15800	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BA058_15805	COG1879	ABC-type sugar transport system periplasmic component
BA058_15810	COG1129	ABC transporter
BA058_15815	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA058_15820	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA058_15830	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BA058_15840	COG0312	modulator of DNA gyrase
BA058_15845	COG3783	Cytochrome b(562)
BA058_15850	COG0602	queuosine metabolic process
BA058_15855	COG1328	CTP reductase activity
BA058_15865	COG0366	Alpha amylase catalytic
BA058_15870	COG1263	PTS System
BA058_15870	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_15875	COG1609	Transcriptional regulator
BA058_15880	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BA058_15885	COG0251	oxidation-reduction process
BA058_15905	COG1438	arginine binding
BA058_15910	COG1288	antiporter activity
BA058_15915	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BA058_15920	COG0549	Belongs to the carbamate kinase family
BA058_15930	COG2731	YhcH YjgK YiaL family protein
BA058_15935	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BA058_15940	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
BA058_15945	COG0456	acetyltransferase
BA058_15955	COG0525	valine-tRNA ligase activity
BA058_15960	COG2927	DNA polymerase III (CHI subunit)
BA058_15970	COG0795	lipopolysaccharide-transporting ATPase activity
BA058_15975	COG0795	lipopolysaccharide-transporting ATPase activity
BA058_15980	COG0433	COG0433 Predicted ATPase
BA058_15985	COG1609	Transcriptional regulator
BA058_15990	COG2610	gluconate transmembrane transporter activity
BA058_15995	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_16000	COG1063	alcohol dehydrogenase
BA058_16005	COG3265	gluconokinase activity
BA058_16010	COG1064	alcohol dehydrogenase
BA058_16020	COG0582	viral genome integration into host DNA
BA058_16025	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BA058_16025	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA058_16030	COG2194	sulfuric ester hydrolase activity
BA058_16050	COG1846	Transcriptional regulator
BA058_16070	COG3539	Fimbrial protein
BA058_16155	COG2259	Doxx family
BA058_16160	COG1304	FMN binding
BA058_16170	COG1309	transcriptional regulator
BA058_16175	COG4372	Transposase
BA058_16180	COG3436	PFAM IS66 Orf2 family protein
BA058_16195	COG2801	Transposase and inactivated derivatives
BA058_16200	COG2963	transposase activity
BA058_16205	COG2801	Transposase and inactivated derivatives
BA058_16255	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
BA058_16260	COG0745	RESPONSE REGULATOR receiver
BA058_16265	COG5002	protein histidine kinase activity
BA058_16320	COG4372	Transposase
BA058_16375	COG2610	gluconate transmembrane transporter activity
BA058_16380	COG0583	DNA-binding transcription factor activity
BA058_16390	COG2076	Multidrug Resistance protein
BA058_16405	COG4869	propanediol catabolic process
BA058_16410	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA058_16415	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA058_16420	COG1882	Formate acetyltransferase
BA058_16425	COG1012	belongs to the aldehyde dehydrogenase family
BA058_16425	COG1454	alcohol dehydrogenase
BA058_16435	COG1454	alcohol dehydrogenase
BA058_16435	COG1012	belongs to the aldehyde dehydrogenase family
BA058_16440	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA058_16445	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA058_16450	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BA058_16490	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BA058_16495	COG1757	Na H antiporter
BA058_16510	COG1757	Na H antiporter
BA058_16540	COG3596	GTP binding
BA058_16550	COG2378	regulation of single-species biofilm formation
BA058_16575	COG2003	Belongs to the UPF0758 family
BA058_16630	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BA058_16645	COG0582	viral genome integration into host DNA
BA058_16650	COG4974	Belongs to the 'phage' integrase family
BA058_16660	COG3539	Fimbrial protein
BA058_16665	COG3539	Fimbrial protein
BA058_16670	COG3121	Chaperone
BA058_16675	COG3188	usher protein
BA058_16680	COG3539	Fimbrial protein
BA058_16685	COG3539	Fimbrial protein
BA058_16690	COG3539	Fimbrial protein
BA058_16705	COG0246	Mannitol dehydrogenase
BA058_16715	COG2186	Transcriptional regulator
BA058_16730	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA058_16735	COG0583	DNA-binding transcription factor activity
BA058_16740	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BA058_16745	COG0700	Nucleoside recognition
BA058_16750	COG3366	ferrous iron transmembrane transporter activity
BA058_16760	COG0477	Major facilitator Superfamily
BA058_16775	COG1924	4 iron, 4 sulfur cluster binding
BA058_16780	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
BA058_16785	COG2733	membrane
BA058_16825	COG0523	cobalamin synthesis protein
BA058_16830	COG2879	small protein
BA058_16835	COG1966	Carbon starvation protein
BA058_16845	COG0840	transmembrane signaling receptor activity
BA058_16850	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA058_16860	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA058_16865	COG0025	NhaP-type Na H and K H
BA058_16870	COG1802	Transcriptional regulator
BA058_16875	COG1063	alcohol dehydrogenase
BA058_16890	COG1484	DNA-dependent DNA replication
BA058_16905	COG2966	Psort location CytoplasmicMembrane, score
BA058_16910	COG2197	response regulator
BA058_16915	COG2197	response regulator
BA058_16920	COG4114	ferric iron reductase
BA058_16955	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
BA058_16960	COG0456	acetyltransferase
BA058_16965	COG1011	Hydrolase
BA058_16995	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BA058_17000	COG5532	Uncharacterized conserved protein (DUF2303)
BA058_17045	COG1846	Transcriptional regulator
BA058_17055	COG4725	Belongs to the MT-A70-like family
BA058_17060	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BA058_17065	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
BA058_17075	COG1403	HNH endonuclease
BA058_17155	COG0740	serine-type endopeptidase activity
BA058_17225	COG5301	cellulose 1,4-beta-cellobiosidase activity
BA058_17260	COG2823	Periplasmic or secreted lipoprotein
BA058_17270	COG4667	esterase of the alpha-beta hydrolase superfamily
BA058_17275	COG0084	hydrolase, TatD family'
BA058_17280	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA058_17285	COG1328	CTP reductase activity
BA058_17330	COG0560	Phosphoserine phosphatase
BA058_17335	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BA058_17340	COG1056	cytidyltransferase-related domain
BA058_17340	COG3172	ATPase kinase involved in NAD metabolism
BA058_17345	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
BA058_17355	COG0488	(ABC) transporter
BA058_17360	COG0741	lytic transglycosylase activity
BA058_17380	COG2207	Transcriptional regulator
BA058_17380	COG3708	Transcriptional regulator
BA058_17385	COG3045	CreA protein
BA058_17390	COG0745	RESPONSE REGULATOR receiver
BA058_17395	COG2205	protein histidine kinase activity
BA058_17400	COG4452	Inner membrane protein CreD
BA058_17405	COG0745	RESPONSE REGULATOR receiver
BA058_17415	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BA058_17425	COG0527	aspartate kinase activity
BA058_17425	COG0460	homoserine dehydrogenase
BA058_17435	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BA058_17455	COG1115	amino acid carrier protein
BA058_17460	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BA058_17465	COG0521	Mo-molybdopterin cofactor biosynthetic process
BA058_17475	COG1584	GPR1 FUN34 yaaH family protein
BA058_17480	COG4735	regulation of single-species biofilm formation
BA058_17510	COG3119	arylsulfatase activity
BA058_17525	COG0583	DNA-binding transcription factor activity
BA058_17540	COG0196	riboflavin kinase activity
BA058_17555	COG1047	Peptidyl-prolyl cis-trans
BA058_17585	COG0505	Belongs to the CarA family
BA058_17590	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BA058_17645	COG0644	oxidoreductase
BA058_17650	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
BA058_17655	COG2271	Major facilitator Superfamily
BA058_17670	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BA058_17705	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA058_17715	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BA058_17720	COG0564	pseudouridine synthase activity
BA058_17730	COG0417	DNA replication proofreading
BA058_17735	COG0235	Class ii aldolase
BA058_17750	COG4977	sequence-specific DNA binding
BA058_17765	COG0586	Pfam SNARE associated Golgi protein
BA058_17775	COG1178	ABC-type Fe3 transport system permease component
BA058_17780	COG4143	(ABC) transporter
BA058_17805	COG0473	3-isopropylmalate dehydrogenase activity
BA058_17820	COG0583	DNA-binding transcription factor activity
BA058_17825	COG0028	Belongs to the TPP enzyme family
BA058_17830	COG0440	acetolactate synthase activity
BA058_17840	COG1609	Transcriptional regulator
BA058_17855	COG3116	cell division
BA058_17860	COG0768	penicillin binding
BA058_17865	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BA058_17870	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BA058_17885	COG0772	Belongs to the SEDS family
BA058_17900	COG1181	Belongs to the D-alanine--D-alanine ligase family
BA058_17905	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BA058_17910	COG0849	cell division
BA058_17915	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BA058_17935	COG0494	nUDIX hydrolase
BA058_17950	COG0237	dephospho-CoA kinase activity
BA058_17960	COG1459	type II secretion system
BA058_17965	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA058_17970	COG4969	Belongs to the N-Me-Phe pilin family
BA058_17980	COG0157	Belongs to the NadC ModD family
BA058_17985	COG3023	N-Acetylmuramoyl-L-alanine amidase
BA058_17990	COG3725	Membrane protein required for beta-lactamase induction
BA058_17995	COG1113	amino acid transport
BA058_18000	COG3157	Type VI secretion system effector, Hcp
BA058_18025	COG2186	Transcriptional regulator
BA058_18030	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BA058_18035	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA058_18040	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA058_18045	COG3064	Membrane
BA058_18050	COG1049	propionate catabolic process, 2-methylcitrate cycle
BA058_18065	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BA058_18075	COG2132	Multicopper oxidase
BA058_18085	COG4993	Dehydrogenase
BA058_18090	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
BA058_18095	COG0288	reversible hydration of carbon dioxide
BA058_18100	COG1131	(ABC) transporter
BA058_18105	COG0842	Transport permease protein
BA058_18110	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_18115	COG0726	polysaccharide deacetylase
BA058_18125	COG5464	transposase or invertase
BA058_18145	COG3539	Fimbrial protein
BA058_18150	COG3539	Fimbrial protein
BA058_18155	COG3539	Fimbrial protein
BA058_18160	COG3539	Fimbrial protein
BA058_18165	COG3188	usher protein
BA058_18170	COG3121	Chaperone
BA058_18175	COG3539	Fimbrial protein
BA058_18180	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA058_18185	COG0617	tRNA 3'-terminal CCA addition
BA058_18190	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BA058_18195	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BA058_18205	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BA058_18210	COG1643	Atp-dependent helicase
BA058_18215	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BA058_18220	COG4774	siderophore transport
BA058_18225	COG1120	ATPase activity
BA058_18230	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BA058_18235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA058_18245	COG0038	chloride channel
BA058_18255	COG2860	membrane
BA058_18260	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BA058_18275	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BA058_18280	COG3835	regulator
BA058_18300	COG0024	Methionine aminopeptidase
BA058_18325	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BA058_18330	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BA058_18335	COG0575	Belongs to the CDS family
BA058_18340	COG0750	zinc metalloprotease
BA058_18350	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BA058_18355	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA058_18380	COG0587	DNA-directed DNA polymerase activity
BA058_18395	COG0346	lactoylglutathione lyase activity
BA058_18400	COG0037	tRNA processing
BA058_18405	COG4568	rho-dependent transcription termination
BA058_18415	COG4681	YaeQ
BA058_18420	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BA058_18425	COG3015	lipoprotein NlpE involved in copper resistance
BA058_18430	COG0791	NLP P60 protein
BA058_18440	COG1720	tRNA m6t6A37 methyltransferase activity
BA058_18450	COG1464	Belongs to the NlpA lipoprotein family
BA058_18455	COG2011	ABC-type metal ion transport system permease component
BA058_18465	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA058_18500	COG0656	L-ascorbic acid biosynthetic process
BA058_18505	COG0583	DNA-binding transcription factor activity
BA058_18515	COG2226	methyltransferase
BA058_18520	COG1388	LysM domain
BA058_18520	COG0741	lytic transglycosylase activity
BA058_18530	COG2226	methyltransferase
BA058_18540	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BA058_18640	COG3501	Rhs element vgr protein
BA058_18680	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA058_18690	COG1960	acyl-CoA dehydrogenase activity
BA058_18700	COG0121	glutamine amidotransferase
BA058_18705	COG3034	peptidoglycan biosynthetic process
BA058_18710	COG0791	NLP P60 protein
BA058_18715	COG1943	Transposase
BA058_18735	COG2161	toxin-antitoxin pair type II binding
BA058_18745	COG0454	-acetyltransferase
BA058_18750	COG1690	Belongs to the RtcB family
BA058_18755	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BA058_18760	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA058_18780	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA058_18820	COG4983	Phage plasmid primase, P4 family domain protein
BA058_18860	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA058_18865	COG2801	Transposase and inactivated derivatives
BA058_18870	COG2963	transposase activity
BA058_18925	COG3539	Fimbrial protein
BA058_18930	COG3121	Chaperone
BA058_18960	COG1846	Transcriptional regulator
BA058_18970	COG2819	hydrolase of the alpha beta superfamily
BA058_18975	COG2382	esterase
BA058_18995	COG3385	transposase activity
BA058_19015	COG4771	TonB-dependent receptor
BA058_19025	COG0523	cobalamin synthesis protein
BA058_19030	COG4372	Transposase
BA058_19050	COG3436	PFAM IS66 Orf2 family protein
BA058_19060	COG0583	DNA-binding transcription factor activity
BA058_19065	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BA058_19075	COG1982	Orn Lys Arg decarboxylase major
BA058_19080	COG0531	amino acid
BA058_19100	COG3468	outer membrane autotransporter barrel domain protein
BA058_19115	COG2003	Belongs to the UPF0758 family
BA058_19155	COG1484	DNA-dependent DNA replication
BA058_19160	COG4584	PFAM Integrase catalytic
BA058_19195	COG3477	response to acidic pH
BA058_19215	COG3188	usher protein
BA058_19240	COG0254	rRNA binding
BA058_19250	COG1902	pentaerythritol trinitrate reductase activity
BA058_19255	COG1073	alpha beta
BA058_19260	COG0583	DNA-binding transcription factor activity
BA058_19270	COG0667	Aldo Keto reductase
BA058_19275	COG0656	L-ascorbic acid biosynthetic process
BA058_19280	COG1388	LysM domain
BA058_19280	COG2373	Large extracellular alpha-helical protein
BA058_19280	COG4932	domain protein
BA058_19285	COG3708	Transcriptional regulator
BA058_19285	COG2207	Transcriptional regulator
BA058_19290	COG0656	L-ascorbic acid biosynthetic process
BA058_19295	COG3059	membrane
BA058_19305	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA058_19310	COG2207	Transcriptional regulator
BA058_19315	COG0247	lactate metabolic process
BA058_19320	COG1139	Iron-sulfur cluster binding protein
BA058_19325	COG1556	Lactate utilization protein
BA058_19340	COG3468	outer membrane autotransporter barrel domain protein
BA058_19350	COG2200	EAL domain
BA058_19350	COG2771	luxR family
BA058_19355	COG0582	viral genome integration into host DNA
BA058_19380	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA058_19390	COG2771	luxR family
BA058_19390	COG2200	EAL domain
BA058_19395	COG0583	DNA-binding transcription factor activity
BA058_19405	COG0666	response to abiotic stimulus
BA058_19415	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BA058_19420	COG1304	FMN binding
BA058_19430	COG0549	Belongs to the carbamate kinase family
BA058_19435	COG0402	S-adenosylhomocysteine deaminase activity
BA058_19440	COG1064	alcohol dehydrogenase
BA058_19450	COG1280	lysine exporter protein (LysE YggA)
BA058_19460	COG3829	transcription factor binding
BA058_19465	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BA058_19470	COG0372	Belongs to the citrate synthase family
BA058_19475	COG2079	MmgE PrpD family protein
BA058_19480	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA058_19485	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BA058_19490	COG0402	S-adenosylhomocysteine deaminase activity
BA058_19495	COG2801	Transposase and inactivated derivatives
BA058_19505	COG0110	maltose O-acetyltransferase activity
BA058_19510	COG2223	nitrite transmembrane transporter activity
BA058_19520	COG1609	Transcriptional regulator
BA058_19525	COG3122	Protein conserved in bacteria
BA058_19555	COG1215	transferase activity, transferring glycosyl groups
BA058_19560	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BA058_19565	COG4521	taurine ABC transporter
BA058_19575	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA058_19580	COG2175	clavaminate synthase activity
BA058_19585	COG0113	porphobilinogen synthase activity
BA058_19590	COG3468	outer membrane autotransporter barrel domain protein
BA058_19595	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA058_19600	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BA058_19610	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BA058_19630	COG1181	Belongs to the D-alanine--D-alanine ligase family
BA058_19640	COG1785	Belongs to the alkaline phosphatase family
BA058_19650	COG3706	GGDEF domain
BA058_19655	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BA058_19680	COG4126	flavin adenine dinucleotide binding
BA058_19700	COG1940	carbohydrate kinase activity
BA058_19705	COG2814	Major facilitator Superfamily
BA058_19710	COG0419	ATPase involved in DNA repair
BA058_19715	COG0420	3'-5' exonuclease activity
BA058_19720	COG0745	RESPONSE REGULATOR receiver
BA058_19725	COG5002	protein histidine kinase activity
BA058_19730	COG1114	Component of the transport system for branched-chain amino acids
BA058_19735	COG1113	amino acid transport
BA058_19740	COG0366	Alpha amylase catalytic
BA058_19760	COG1862	Preprotein translocase
BA058_19765	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA058_19770	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA058_19775	COG1403	HNH endonuclease
BA058_19780	COG3248	Nucleoside-binding outer membrane protein
BA058_19785	COG4238	major outer membrane lipoprotein
BA058_19795	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA058_19795	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA058_19810	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BA058_19815	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BA058_19820	COG0667	Aldo Keto reductase
BA058_19830	COG0142	geranyltranstransferase activity
BA058_19845	COG0693	protein deglycase activity
BA058_19850	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BA058_19860	COG2814	Major facilitator Superfamily
BA058_19870	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BA058_19875	COG1845	cytochrome c oxidase, subunit III
BA058_19880	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BA058_19885	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BA058_19890	COG2223	nitrite transmembrane transporter activity
BA058_19895	COG3056	Lipoprotein
BA058_19900	COG0271	Belongs to the BolA IbaG family
BA058_19925	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BA058_19930	COG0776	regulation of translation
BA058_19935	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA058_19940	COG1555	photosystem II stabilization
BA058_19945	COG0824	Thioesterase
BA058_19955	COG4533	DNA binding
BA058_19965	COG1522	sequence-specific DNA binding
BA058_19970	COG1132	(ABC) transporter
BA058_19975	COG1132	(ABC) transporter
BA058_19980	COG0347	Belongs to the P(II) protein family
BA058_19985	COG0004	ammonium transporteR
BA058_19990	COG1946	Acyl-CoA thioesterase
BA058_19995	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BA058_20000	COG3695	enzyme binding
BA058_20010	COG5507	3-demethylubiquinone-9 3-methyltransferase
BA058_20015	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BA058_20025	COG0110	maltose O-acetyltransferase activity
BA058_20040	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA058_20045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_20050	COG1309	transcriptional regulator
BA058_20055	COG1196	nuclear chromosome segregation
BA058_20055	COG3264	Mechanosensitive ion channel
BA058_20070	COG3923	Primosomal replication protein n
BA058_20075	COG2832	Protein of unknown function (DUF454)
BA058_20085	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BA058_20100	COG0326	Molecular chaperone. Has ATPase activity
BA058_20120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA058_20125	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BA058_20125	COG4651	solute:proton antiporter activity
BA058_20130	COG2223	nitrite transmembrane transporter activity
BA058_20135	COG0737	Belongs to the 5'-nucleotidase family
BA058_20150	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BA058_20155	COG3735	TraB family
BA058_20160	COG3549	Plasmid maintenance system killer
BA058_20165	COG3093	addiction module antidote protein HigA
BA058_20170	COG2217	Heavy metal translocating P-type atpase
BA058_20180	COG0531	amino acid
BA058_20185	COG0789	Transcriptional regulator
BA058_20195	COG1585	Membrane protein implicated in regulation of membrane protease activity
BA058_20200	COG0330	HflC and HflK could
BA058_20205	COG4619	ABC transporter
BA058_20210	COG0390	transport system, permease component
BA058_20215	COG3118	belongs to the thioredoxin family
BA058_20220	COG0300	oxidoreductase activity
BA058_20225	COG2755	lipolytic protein G-D-S-L family
BA058_20230	COG4181	ATPase activity
BA058_20235	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BA058_20255	COG1414	Transcriptional regulator
BA058_20260	COG3960	tartronate-semialdehyde synthase activity
BA058_20265	COG3622	Belongs to the hyi family
BA058_20270	COG2084	Dehydrogenase
BA058_20275	COG1953	Uracil, thiamine, allantoin
BA058_20285	COG2233	PERMEase
BA058_20290	COG1929	Belongs to the glycerate kinase type-1 family
BA058_20295	COG3257	ureidoglycine aminohydrolase activity
BA058_20300	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BA058_20305	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BA058_20310	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BA058_20315	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BA058_20325	COG0549	Belongs to the carbamate kinase family
BA058_20330	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BA058_20335	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BA058_20350	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA058_20360	COG1988	membrane-bound metal-dependent
BA058_20365	COG2501	S4 domain
BA058_20385	COG0582	viral genome integration into host DNA
BA058_20390	COG0582	viral genome integration into host DNA
BA058_20400	COG0500	methyltransferase
BA058_20405	COG4571	Outer membrane protease
BA058_20415	COG4783	chaperone-mediated protein folding
BA058_20420	COG1215	transferase activity, transferring glycosyl groups
BA058_20425	COG5002	protein histidine kinase activity
BA058_20430	COG0745	RESPONSE REGULATOR receiver
BA058_20435	COG1538	Outer membrane efflux protein
BA058_20440	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_20445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_20450	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA058_20455	COG1113	amino acid transport
BA058_20460	COG0668	transmembrane transport
BA058_20465	COG0778	Nitroreductase
BA058_20470	COG2315	Protein conserved in bacteria
BA058_20495	COG2977	Belongs to the P-Pant transferase superfamily
BA058_20500	COG4771	TonB-dependent receptor
BA058_20505	COG2382	esterase
BA058_20510	COG3251	PFAM MbtH domain protein
BA058_20515	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BA058_20515	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BA058_20520	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
BA058_20525	COG1120	ATPase activity
BA058_20530	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA058_20535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA058_20545	COG4592	Periplasmic binding protein
BA058_20550	COG1169	isochorismate synthase
BA058_20555	COG1021	2,3-dihydroxybenzoate-AMP ligase
BA058_20560	COG1535	isochorismatase
BA058_20560	COG3433	isochorismatase activity
BA058_20565	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_20570	COG2050	protein possibly involved in aromatic compounds catabolism
BA058_20575	COG1966	Carbon starvation protein
BA058_20580	COG2879	small protein
BA058_20585	COG0371	Dehydrogenase
BA058_20590	COG0436	Aminotransferase
BA058_20595	COG1475	DNA binding
BA058_20600	COG3969	phosphoadenosine phosphosulfate
BA058_20605	COG0583	DNA-binding transcription factor activity
BA058_20610	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA058_20615	COG0450	alkyl hydroperoxide reductase
BA058_20620	COG3634	alkyl hydroperoxide reductase activity
BA058_20625	COG0589	response to stress
BA058_20630	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA058_20635	COG3719	Belongs to the RNase T2 family
BA058_20640	COG0471	metal ion transport
BA058_20655	COG3051	citrate lyase alpha subunit
BA058_20660	COG2301	Belongs to the HpcH HpaI aldolase family
BA058_20670	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BA058_20675	COG3290	protein histidine kinase activity
BA058_20680	COG4565	transcriptional regulatory protein
BA058_20685	COG3069	C4-dicarboxylate transmembrane transporter activity
BA058_20695	COG1278	Cold shock
BA058_20705	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA058_20710	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BA058_20720	COG0583	DNA-binding transcription factor activity
BA058_20740	COG1686	Belongs to the peptidase S11 family
BA058_20745	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA058_20750	COG0772	Belongs to the SEDS family
BA058_20755	COG0768	penicillin binding
BA058_20765	COG0799	negative regulation of ribosome biogenesis
BA058_20770	COG0406	alpha-ribazole phosphatase activity
BA058_20780	COG1466	dna polymerase III delta subunit
BA058_20795	COG2888	peptidyl-tyrosine sulfation
BA058_20805	COG1126	abc transporter atp-binding protein
BA058_20810	COG0765	amino acid transport
BA058_20815	COG0765	amino acid transport
BA058_20820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_20830	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BA058_20835	COG4535	Mg2 and Co2 transporter CorC
BA058_20845	COG1702	phosphate starvation-inducible protein PhoH
BA058_20855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA058_20895	COG0367	asparagine synthase
BA058_20900	COG0647	UMP catabolic process
BA058_20905	COG1846	Transcriptional regulator
BA058_20905	COG1940	carbohydrate kinase activity
BA058_20910	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BA058_20920	COG1263	PTS System
BA058_20920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_20920	COG2190	(PTS) system
BA058_20940	COG0861	Integral membrane protein TerC family
BA058_20945	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA058_20950	COG1454	alcohol dehydrogenase
BA058_20955	COG3395	kinase activity
BA058_20960	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BA058_20965	COG1349	DNA-binding transcription factor activity
BA058_20985	COG0735	belongs to the Fur family
BA058_21000	COG0716	FMN binding
BA058_21010	COG0596	Alpha beta hydrolase
BA058_21015	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
BA058_21020	COG0033	Phosphoglucomutase
BA058_21025	COG0531	amino acid
BA058_21030	COG1982	Orn Lys Arg decarboxylase major
BA058_21040	COG0745	RESPONSE REGULATOR receiver
BA058_21045	COG2205	protein histidine kinase activity
BA058_21075	COG3272	Protein of unknown function (DUF1722)
BA058_21080	COG0415	Belongs to the DNA photolyase family
BA058_21090	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BA058_21095	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BA058_21100	COG1984	allophanate hydrolase subunit 2
BA058_21115	COG3180	Ammonia monooxygenase
BA058_21120	COG3539	Fimbrial protein
BA058_21125	COG0372	Belongs to the citrate synthase family
BA058_21135	COG2009	succinate dehydrogenase
BA058_21140	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BA058_21145	COG1053	succinate dehydrogenase
BA058_21150	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BA058_21160	COG0567	Dehydrogenase, E1 component
BA058_21165	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA058_21175	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BA058_21190	COG1271	oxidase subunit
BA058_21195	COG1294	oxidase, subunit
BA058_21200	COG4890	Cyd operon protein YbgT
BA058_21205	COG3790	cyd operon protein YbgE
BA058_21210	COG0824	Thioesterase
BA058_21215	COG0811	peptide transport
BA058_21220	COG0848	biopolymer transport protein
BA058_21225	COG3064	Membrane
BA058_21235	COG2885	chlorophyll binding
BA058_21240	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BA058_21285	COG3201	nicotinamide mononucleotide transporter
BA058_21290	COG1230	cation diffusion facilitator family transporter
BA058_21305	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA058_21315	COG2017	converts alpha-aldose to the beta-anomer
BA058_21325	COG1085	galactose-1-phosphate uridylyltransferase
BA058_21330	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BA058_21335	COG1119	ATPase activity
BA058_21345	COG3585	molybdate ion transport
BA058_21345	COG2005	Transcriptional regulator
BA058_21355	COG0725	ABC transporter, periplasmic molybdate-binding protein
BA058_21360	COG4149	molybdate abc transporter
BA058_21370	COG0561	phosphatase activity
BA058_21380	COG0583	DNA-binding transcription factor activity
BA058_21385	COG2828	Protein conserved in bacteria
BA058_21390	COG0471	metal ion transport
BA058_21395	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BA058_21400	COG4677	pectinesterase activity
BA058_21405	COG1881	PFAM PEBP family protein
BA058_21415	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA058_21430	COG2226	methyltransferase
BA058_21435	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BA058_21445	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BA058_21455	COG0521	Mo-molybdopterin cofactor biosynthetic process
BA058_21465	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BA058_21470	COG0314	molybdopterin synthase activity
BA058_21475	COG0670	Belongs to the BI1 family
BA058_21480	COG0670	Belongs to the BI1 family
BA058_21485	COG0392	lysyltransferase activity
BA058_21490	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA058_21495	COG3568	Endonuclease Exonuclease Phosphatase
BA058_21505	COG0842	Transport permease protein
BA058_21510	COG0842	Transport permease protein
BA058_21515	COG1131	(ABC) transporter
BA058_21525	COG1309	transcriptional regulator
BA058_21530	COG0513	Belongs to the DEAD box helicase family
BA058_21540	COG1199	ATP-dependent helicase activity
BA058_21545	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BA058_21550	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BA058_21560	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BA058_21585	COG0668	transmembrane transport
BA058_21590	COG1126	abc transporter atp-binding protein
BA058_21595	COG0765	amino acid transport
BA058_21600	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_21615	COG5006	permease, DMT superfamily
BA058_21620	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BA058_21625	COG2194	sulfuric ester hydrolase activity
BA058_21635	COG1321	iron dependent repressor
BA058_21640	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BA058_21645	COG1376	ErfK ybiS ycfS ynhG family protein
BA058_21650	COG0488	(ABC) transporter
BA058_21655	COG0561	phosphatase activity
BA058_21665	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA058_21670	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BA058_21675	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA058_21680	COG0303	'Molybdopterin
BA058_21685	COG1446	asparaginase
BA058_21710	COG2200	EAL domain
BA058_21715	COG2199	diguanylate cyclase activity
BA058_21730	COG2133	pyrroloquinoline quinone binding
BA058_21735	COG0625	glutathione transferase activity
BA058_21740	COG1686	Belongs to the peptidase S11 family
BA058_21745	COG1349	DNA-binding transcription factor activity
BA058_21750	COG0671	phosphoesterase, PA-phosphatase related
BA058_21755	COG2814	Major facilitator Superfamily
BA058_21765	COG0561	phosphatase activity
BA058_21770	COG0738	Major facilitator superfamily
BA058_21775	COG3226	Transcriptional regulator
BA058_21790	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA058_21800	COG0778	Nitroreductase
BA058_21820	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA058_21825	COG3842	ATPase activity
BA058_21830	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA058_21835	COG1177	transmembrane transport
BA058_21850	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_21855	COG4160	amino acid transport
BA058_21860	COG4215	(ABC) transporter
BA058_21865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA058_21870	COG1126	abc transporter atp-binding protein
BA058_21885	COG3023	N-Acetylmuramoyl-L-alanine amidase
BA058_21890	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BA058_21895	COG0702	epimerase
BA058_21900	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BA058_21905	COG0028	Belongs to the TPP enzyme family
BA058_21910	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA058_21920	COG2431	L-lysine efflux transmembrane transporter activity
BA058_21925	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BA058_21935	COG3593	DNA synthesis involved in DNA repair
BA058_21940	COG2990	Protein conserved in bacteria
BA058_21945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_21955	COG1278	Cold shock
BA058_22015	COG0740	serine-type endopeptidase activity
BA058_22035	COG0542	response to heat
BA058_22055	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BA058_22060	COG4988	ABC transporter
BA058_22065	COG0492	ferredoxin-NADP+ reductase activity
BA058_22070	COG1522	sequence-specific DNA binding
BA058_22075	COG1178	ABC-type Fe3 transport system permease component
BA058_22075	COG1674	ftsk spoiiie
BA058_22085	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BA058_22095	COG0243	molybdopterin cofactor binding
BA058_22100	COG0437	4 iron, 4 sulfur cluster binding
BA058_22105	COG3302	dmso reductase anchor subunit
BA058_22110	COG1335	isochorismatase
BA058_22120	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA058_22125	COG1882	Formate acetyltransferase
BA058_22130	COG2116	formate transmembrane transporter activity
BA058_22135	COG1944	ATP diphosphatase activity
BA058_22140	COG2323	membrane
BA058_22155	COG0501	Belongs to the peptidase M48B family
BA058_22165	COG0539	negative regulation of cytoplasmic translation
BA058_22175	COG2333	competence protein COMEC
BA058_22175	COG0658	competence protein
BA058_22190	COG3214	Protein conserved in bacteria
BA058_22205	COG3173	Aminoglycoside phosphotransferase
BA058_22210	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BA058_22215	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA058_22225	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BA058_22235	COG2989	Protein conserved in bacteria
BA058_22240	COG3108	Peptidase M15
BA058_22245	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA058_22250	COG1448	Aminotransferase
BA058_22275	COG0308	aminopeptidase N
BA058_22285	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA058_22295	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BA058_22300	COG0431	NADPH-dependent FMN reductase
BA058_22315	COG0633	Ferredoxin
BA058_22315	COG3217	Mosc domain protein beta barrel domain protein
BA058_22325	COG0488	(ABC) transporter
BA058_22330	COG2995	paraquat-inducible protein a
BA058_22335	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BA058_22335	COG3008	intermembrane lipid transfer
BA058_22340	COG3009	Protein conserved in bacteria
BA058_22345	COG3130	regulation of translation
BA058_22355	COG1067	ATP-dependent peptidase activity
BA058_22365	COG2885	chlorophyll binding
BA058_22365	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BA058_22380	COG3070	regulator of competence-specific genes
BA058_22385	COG1289	transmembrane transporter activity
BA058_22390	COG3304	Inner membrane component domain
BA058_22395	COG0210	DNA helicase
BA058_22415	COG1832	CoA-binding protein
BA058_22430	COG1254	Belongs to the acylphosphatase family
BA058_22435	COG2920	part of a sulfur-relay system
BA058_22440	COG0670	Belongs to the BI1 family
BA058_22450	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
BA058_22455	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
BA058_22460	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
BA058_22465	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BA058_22470	COG1999	signal sequence binding
BA058_22475	COG1773	rubredoxin
BA058_22480	COG1271	oxidase subunit
BA058_22485	COG1294	oxidase, subunit
BA058_22500	COG1278	Cold shock
BA058_22505	COG1278	Cold shock
BA058_22520	COG0348	domain, Protein
BA058_22525	COG2205	protein histidine kinase activity
BA058_22525	COG0784	Response regulator, receiver
BA058_22525	COG2198	Histidine kinase
BA058_22530	COG1879	ABC-type sugar transport system periplasmic component
BA058_22535	COG0745	RESPONSE REGULATOR receiver
BA058_22540	COG3005	denitrification pathway
BA058_22545	COG0243	molybdopterin cofactor binding
BA058_22585	COG3729	General stress protein
BA058_22590	COG2233	PERMEase
BA058_22625	COG1309	transcriptional regulator
BA058_22630	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BA058_22630	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BA058_22630	COG0506	proline dehydrogenase activity
BA058_22640	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA058_22660	COG1702	phosphate starvation-inducible protein PhoH
BA058_22665	COG3658	cytochrome
BA058_22670	COG1215	transferase activity, transferring glycosyl groups
BA058_22675	COG1649	PFAM Uncharacterised BCR, COG1649
BA058_22675	COG0726	polysaccharide deacetylase
BA058_22680	COG0457	Tetratricopeptide repeat
BA058_22685	COG3706	GGDEF domain
BA058_22710	COG3381	protein complex oligomerization
BA058_22720	COG1462	curli production assembly transport component CsgG
BA058_22735	COG2197	response regulator
BA058_22765	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BA058_22770	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA058_22795	COG2943	transferase activity, transferring hexosyl groups
BA058_22800	COG5645	(Lipo)protein
BA058_22820	COG1560	Kdo2-lipid A biosynthetic process
BA058_22830	COG2353	YceI-like domain
BA058_22835	COG3038	cytochrome b561
BA058_22870	COG2999	glutathione oxidoreductase activity
BA058_22880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA058_22890	COG0673	inositol 2-dehydrogenase activity
BA058_22895	COG0728	peptidoglycan biosynthetic process
BA058_22900	COG3418	PFAM FlgN family protein
BA058_22905	COG2747	anti-sigma28 factor FlgM
BA058_22910	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
BA058_22915	COG1815	bacterial-type flagellum-dependent cell motility
BA058_22920	COG1558	bacterial-type flagellum-dependent cell motility
BA058_22925	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BA058_22930	COG1749	Flagellar hook protein flgE
BA058_22935	COG4787	bacterial-type flagellum-dependent cell motility
BA058_22940	COG4786	Flagellar basal body rod
BA058_22955	COG1705	Flagellar rod assembly protein muramidase FlgJ
BA058_22955	COG3951	Flagellar rod assembly protein muramidase FlgJ
BA058_22960	COG1256	bacterial-type flagellum assembly
BA058_22965	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA058_22970	COG1530	ribonuclease E activity
BA058_22980	COG0564	pseudouridine synthase activity
BA058_22990	COG1399	metal-binding, possibly nucleic acid-binding protein
BA058_23010	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BA058_23015	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_23025	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BA058_23030	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA058_23035	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BA058_23045	COG0470	DNA polymerase III
BA058_23050	COG0084	hydrolase, TatD family'
BA058_23055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA058_23055	COG1263	PTS System
BA058_23065	COG0537	adenosine 5'-monophosphoramidase activity
BA058_23070	COG5633	Lipoprotein
BA058_23075	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
BA058_23095	COG1252	NADH dehydrogenase
BA058_23100	COG3134	Outer membrane lipoprotein
BA058_23105	COG1309	transcriptional regulator
BA058_23115	COG1388	LysM domain
BA058_23115	COG1376	ErfK ybiS ycfS ynhG family protein
BA058_23120	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BA058_23130	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA058_23140	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA058_23150	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BA058_23155	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BA058_23165	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA058_23170	COG1177	transmembrane transport
BA058_23175	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA058_23180	COG3842	ATPase activity
BA058_23195	COG2850	peptidyl-arginine hydroxylation
BA058_23200	COG2205	protein histidine kinase activity
BA058_23205	COG0745	RESPONSE REGULATOR receiver
BA058_23210	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BA058_23230	COG1187	pseudouridine synthase activity
BA058_23235	COG0538	isocitrate dehydrogenase activity
BA058_23240	COG0582	viral genome integration into host DNA
BA058_23385	COG3772	lysozyme
BA058_23420	COG4220	transposase activity
BA058_23490	COG1196	nuclear chromosome segregation
BA058_23535	COG5301	cellulose 1,4-beta-cellobiosidase activity
BA058_23540	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BA058_23545	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BA058_23550	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BA058_23555	COG1121	(ABC) transporter
BA058_23570	COG5562	phage envelope protein
BA058_23575	COG0789	Transcriptional regulator
BA058_23580	COG2200	EAL domain
BA058_23605	COG2200	EAL domain
BA058_23655	COG2894	cell division
BA058_23680	COG0179	Fumarylacetoacetate (FAA) hydrolase
BA058_23695	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BA058_23700	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BA058_23720	COG2719	SpoVR family
BA058_23730	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BA058_23740	COG1619	proteins homologs of microcin C7 resistance protein MccF
BA058_23750	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
BA058_23765	COG0157	Belongs to the NadC ModD family
BA058_23770	COG0500	methyltransferase
BA058_23775	COG1120	ATPase activity
BA058_23795	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA058_23795	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA058_23795	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
BA058_23800	COG1461	Dihydroxyacetone kinase
BA058_23805	COG2376	Dihydroxyacetone kinase
BA058_23810	COG3284	Transcriptional regulator
BA058_23820	COG0012	GTP binding
BA058_23835	COG0659	secondary active sulfate transmembrane transporter activity
BA058_23840	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BA058_23865	COG2890	protein-(glutamine-N5) methyltransferase activity
BA058_23870	COG3094	Invasion gene expression up-regulator, SirB
BA058_23875	COG2912	Transglutaminase-like superfamily
BA058_23890	COG0387	Pfam Sodium calcium exchanger
BA058_23895	COG4572	Cation transport regulator
BA058_23900	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BA058_23905	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BA058_23910	COG4932	domain protein
BA058_23915	COG2197	response regulator
BA058_23920	COG3850	Histidine kinase
BA058_23930	COG2223	nitrite transmembrane transporter activity
BA058_23935	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BA058_23940	COG1140	nitrate reductase beta subunit
BA058_23945	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BA058_23950	COG2181	nitrate reductase activity
BA058_23975	COG0788	formyltetrahydrofolate deformylase activity
BA058_23985	COG1752	Esterase of the alpha-beta hydrolase superfamily
BA058_23990	COG0745	RESPONSE REGULATOR receiver
BA058_23995	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BA058_24000	COG2916	Histone family protein nucleoid-structuring protein H-NS
BA058_24005	COG1435	thymidine kinase activity
BA058_24015	COG1454	alcohol dehydrogenase
BA058_24015	COG1012	belongs to the aldehyde dehydrogenase family
BA058_24020	COG2095	MarC family integral membrane protein
BA058_24030	COG4166	transmembrane transport
BA058_24035	COG0601	transmembrane transport
BA058_24040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA058_24045	COG0444	Belongs to the ABC transporter superfamily
BA058_24050	COG4608	Belongs to the ABC transporter superfamily
BA058_24070	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BA058_24075	COG2350	Protein conserved in bacteria
BA058_24085	COG1607	acyl-coa hydrolase
BA058_24100	COG3047	cAMP biosynthetic process
BA058_24105	COG3685	Protein conserved in bacteria
BA058_24110	COG3685	Protein conserved in bacteria
BA058_24115	COG3729	General stress protein
BA058_24130	COG0135	phosphoribosylanthranilate isomerase activity
BA058_24130	COG0134	indole-3-glycerol-phosphate synthase activity
BA058_24135	COG0512	Glutamine amidotransferase of anthranilate synthase
BA058_24135	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BA058_24140	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BA058_24145	COG0613	PHP domain protein
BA058_24150	COG0009	L-threonylcarbamoyladenylate synthase
BA058_24155	COG4907	membrane protein (DUF2207)
BA058_24160	COG1187	pseudouridine synthase activity
BA058_24175	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BA058_24180	COG1028	Short-chain dehydrogenase reductase Sdr
BA058_24190	COG0616	signal peptide processing
BA058_24205	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA058_24210	COG0583	DNA-binding transcription factor activity
BA058_24230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BA058_24240	COG0671	phosphoesterase, PA-phosphatase related
BA058_24245	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BA058_24250	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BA058_24260	COG0023	Translation Initiation Factor
BA058_24270	COG1349	DNA-binding transcription factor activity
BA058_24280	COG5001	Diguanylate cyclase
BA058_24295	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA058_24295	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA058_24300	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BA058_24310	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA058_24315	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA058_24325	COG2814	Major facilitator Superfamily
BA058_24330	COG4172	Belongs to the ABC transporter superfamily
BA058_24335	COG4172	Belongs to the ABC transporter superfamily
BA058_24340	COG4171	peptide transport system, permease
BA058_24345	COG4168	peptide transport system, permease
BA058_24350	COG4166	transmembrane transport
BA058_24360	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BA058_24365	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BA058_24370	COG1842	Phage shock protein A
BA058_24380	COG1983	PspC domain protein
BA058_24390	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA058_24395	COG0366	Alpha amylase catalytic
BA058_24400	COG1653	transport
BA058_24405	COG1175	transmembrane transport
BA058_24410	COG0395	ABC-type sugar transport system, permease component
BA058_24415	COG1063	alcohol dehydrogenase
BA058_24420	COG1082	Xylose isomerase domain protein TIM barrel
BA058_24425	COG0673	inositol 2-dehydrogenase activity
BA058_24435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA058_24450	COG1609	Transcriptional regulator
BA058_24455	COG3106	COG3106 Predicted ATPase
BA058_24465	COG3283	Transcriptional regulator of aromatic amino acids metabolism
BA058_24470	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BA058_24475	COG4948	Mandelate Racemase Muconate Lactonizing
BA058_24480	COG2866	Carboxypeptidase
BA058_24485	COG0702	epimerase
BA058_24490	COG1073	alpha beta
BA058_24495	COG0583	DNA-binding transcription factor activity
BA058_24505	COG4166	transmembrane transport
BA058_24510	COG0668	transmembrane transport
BA058_24515	COG3182	Iron-regulated membrane protein
BA058_24520	COG0589	response to stress
BA058_24525	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA058_24530	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BA058_24535	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BA058_24545	COG2207	Transcriptional regulator
BA058_24560	COG2840	Smr protein MutS2
BA058_24565	COG3706	GGDEF domain
BA058_24580	COG0513	Belongs to the DEAD box helicase family
BA058_24590	COG0582	viral genome integration into host DNA
BA058_24595	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BA058_24605	COG0589	response to stress
BA058_24610	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA058_24615	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BA058_24615	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BA058_24615	COG1013	pyruvate-flavodoxin oxidoreductase activity
BA058_24615	COG0674	pyruvate-flavodoxin oxidoreductase activity
BA058_24620	COG3042	response to heat
BA058_24625	COG3187	Heat shock protein
BA058_24630	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA058_24635	COG2911	Protein conserved in bacteria
BA058_24645	COG3784	Protein of unknown function (DUF1318)
BA058_24655	COG0667	Aldo Keto reductase
BA058_24660	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BA058_24665	COG4589	Belongs to the CDS family
BA058_24670	COG2267	carboxylic ester hydrolase activity
BA058_24685	COG1643	Atp-dependent helicase
BA058_24690	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BA058_24695	COG1012	belongs to the aldehyde dehydrogenase family
BA058_24700	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA058_24705	COG3038	cytochrome b561
BA058_24720	COG0840	transmembrane signaling receptor activity
BA058_24725	COG0840	transmembrane signaling receptor activity
BA058_24730	COG0583	DNA-binding transcription factor activity
BA058_24750	COG2841	Protein conserved in bacteria
BA058_24755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA058_24760	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BA058_24765	COG1275	C4-dicarboxylate transporter malic acid transport protein
BA058_24770	COG0500	methyltransferase
BA058_24780	COG3135	benzoate transporter
BA058_24785	COG1396	sequence-specific DNA binding
BA058_24790	COG0826	peptidase U32
BA058_24805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA058_24810	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA058_24815	COG3842	ATPase activity
BA058_24820	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA058_24825	COG1177	transmembrane transport
BA058_24850	COG3238	Protein conserved in bacteria
BA058_24855	COG1247	-acetyltransferase
BA058_24860	COG1802	Transcriptional regulator
BA058_24865	COG4772	TonB-dependent receptor
BA058_24875	COG1113	amino acid transport
BA058_24880	COG0625	glutathione transferase activity
BA058_24885	COG0625	glutathione transferase activity
BA058_24895	COG3501	Rhs element vgr protein
BA058_24925	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BA058_24930	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BA058_24935	COG0384	phenazine biosynthesis protein PhzF
BA058_24940	COG2181	nitrate reductase activity
BA058_24945	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BA058_24950	COG1140	nitrate reductase beta subunit
BA058_24955	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BA058_24960	COG2223	nitrite transmembrane transporter activity
BA058_24965	COG0697	spore germination
BA058_24970	COG3383	formate dehydrogenase (NAD+) activity
BA058_24970	COG0243	molybdopterin cofactor binding
BA058_24975	COG3383	formate dehydrogenase (NAD+) activity
BA058_24975	COG0243	molybdopterin cofactor binding
BA058_24980	COG0437	4 iron, 4 sulfur cluster binding
BA058_24985	COG2864	formate dehydrogenase
BA058_24990	COG3093	addiction module antidote protein HigA
BA058_25000	COG1064	alcohol dehydrogenase
BA058_25020	COG1764	response to oxidative stress
BA058_25025	COG2202	Pas domain
BA058_25025	COG2200	EAL domain
BA058_25025	COG2199	diguanylate cyclase activity
BA058_25030	COG3706	GGDEF domain
BA058_25030	COG3706	GGDEF domain
BA058_25040	COG0531	amino acid
BA058_25045	COG0076	glutamate decarboxylase activity
BA058_25055	COG0612	Peptidase, M16
BA058_25060	COG4771	TonB-dependent receptor
BA058_25065	COG4178	(ABC) transporter
BA058_25070	COG0641	radical SAM
BA058_25075	COG3119	arylsulfatase activity
BA058_25090	COG0243	molybdopterin cofactor binding
BA058_25095	COG3539	Fimbrial protein
BA058_25100	COG3539	Fimbrial protein
BA058_25105	COG3539	Fimbrial protein
BA058_25110	COG3188	usher protein
BA058_25115	COG3121	Chaperone
BA058_25120	COG3539	Fimbrial protein