locus-tag class description FE384_00005 PF08254 Threonine leader peptide FE384_00010 PF03447 Homoserine dehydrogenase, NAD binding domain FE384_00010 PF00742 Homoserine dehydrogenase FE384_00010 PF13840 ACT domain FE384_00010 PF01842 ACT domain FE384_00010 PF00696 Amino acid kinase family FE384_00015 PF08544 GHMP kinases C terminal FE384_00015 PF00288 GHMP kinases N terminal domain FE384_00020 PF00291 Pyridoxal-phosphate dependent enzyme FE384_00020 PF14821 Threonine synthase N terminus FE384_00025 PF10697 Protein of unknown function (DUF2502) FE384_00030 PF03883 Peroxide stress protein YaaA FE384_00035 PF01235 Sodium:alanine symporter family FE384_00040 PF00923 Transaldolase/Fructose-6-phosphate aldolase FE384_00045 PF00994 Probable molybdopterin binding domain FE384_00050 PF01184 GPR1/FUN34/yaaH family FE384_00055 PF03981 Ubiquinol-cytochrome C chaperone FE384_00055 PF13099 Domain of unknown function (DUF3944) FE384_00060 PF10807 Protein of unknown function (DUF2541) FE384_00065 PF00012 Hsp70 protein FE384_00070 PF00684 DnaJ central domain FE384_00070 PF00226 DnaJ domain FE384_00070 PF01556 DnaJ C terminal domain FE384_00075 PF01609 Transposase DDE domain FE384_00080 PF01848 Hok/gef family FE384_00085 PF06965 Na+/H+ antiporter 1 FE384_00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_00090 PF03466 LysR substrate binding domain FE384_00100 PF01649 Ribosomal protein S20 FE384_00105 PF10837 Protein of unknown function (DUF2575) FE384_00110 PF01687 Riboflavin kinase FE384_00110 PF06574 FAD synthetase FE384_00115 PF06827 Zinc finger found in FPG and IleRS FE384_00115 PF00133 tRNA synthetases class I (I, L, M and V) FE384_00115 PF08264 Anticodon-binding domain of tRNA FE384_00120 PF01252 Signal peptidase (SPase) II FE384_00125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE384_00130 PF02401 LytB protein FE384_00135 PF01156 Inosine-uridine preferring nucleoside hydrolase FE384_00140 PF01113 Dihydrodipicolinate reductase, N-terminus FE384_00140 PF05173 Dihydrodipicolinate reductase, C-terminus FE384_00145 PF00117 Glutamine amidotransferase class-I FE384_00145 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FE384_00150 PF02142 MGS-like domain FE384_00150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FE384_00150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE384_00155 PF07180 CaiF/GrlA transcriptional regulator FE384_00160 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_00165 PF00378 Enoyl-CoA hydratase/isomerase FE384_00170 PF13193 AMP-binding enzyme C-terminal domain FE384_00170 PF00501 AMP-binding enzyme FE384_00175 PF02515 CoA-transferase family III FE384_00180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE384_00180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE384_00180 PF02770 Acyl-CoA dehydrogenase, middle domain FE384_00185 PF02028 BCCT, betaine/carnitine/choline family transporter FE384_00190 PF01012 Electron transfer flavoprotein domain FE384_00195 PF00766 Electron transfer flavoprotein FAD-binding domain FE384_00195 PF01012 Electron transfer flavoprotein domain FE384_00200 PF01494 FAD binding domain FE384_00210 PF00083 Sugar (and other) transporter FE384_00215 PF02525 Flavodoxin-like fold FE384_00220 PF00999 Sodium/hydrogen exchanger family FE384_00220 PF02254 TrkA-N domain FE384_00225 PF00186 Dihydrofolate reductase FE384_00230 PF00149 Calcineurin-like phosphoesterase FE384_00235 PF04379 ApaG domain FE384_00240 PF00398 Ribosomal RNA adenine dimethylase FE384_00245 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FE384_00250 PF00639 PPIC-type PPIASE domain FE384_00250 PF09312 SurA N-terminal domain FE384_00255 PF03968 OstA-like protein FE384_00255 PF04453 LPS transport system D FE384_00260 PF05099 Tellurite resistance protein TerB FE384_00260 PF00226 DnaJ domain FE384_00275 PF00849 RNA pseudouridylate synthase FE384_00280 PF18337 RapA N-terminal Tudor like domain FE384_00280 PF18339 RapA N-terminal Tudor like domain 1 FE384_00280 PF00176 SNF2 family N-terminal domain FE384_00280 PF12137 RNA polymerase recycling family C-terminal FE384_00280 PF00271 Helicase conserved C-terminal domain FE384_00285 PF03104 DNA polymerase family B, exonuclease domain FE384_00285 PF00136 DNA polymerase family B FE384_00290 PF00596 Class II Aldolase and Adducin N-terminal domain FE384_00295 PF02610 L-arabinose isomerase FE384_00295 PF11762 L-arabinose isomerase C-terminal domain FE384_00300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_00305 PF02311 AraC-like ligand binding domain FE384_00305 PF12833 Helix-turn-helix domain FE384_00310 PF09335 SNARE associated Golgi protein FE384_00315 PF00005 ABC transporter FE384_00320 PF00528 Binding-protein-dependent transport system inner membrane component FE384_00330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_00330 PF12793 Sugar transport-related sRNA regulator N-term FE384_00340 PF07690 Major Facilitator Superfamily FE384_00345 PF00694 Aconitase C-terminal domain FE384_00350 PF00330 Aconitase family (aconitate hydratase) FE384_00355 PF00180 Isocitrate/isopropylmalate dehydrogenase FE384_00360 PF00682 HMGL-like FE384_00360 PF08502 LeuA allosteric (dimerisation) domain FE384_00365 PF08054 Leucine operon leader peptide FE384_00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_00370 PF03466 LysR substrate binding domain FE384_00380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE384_00380 PF00205 Thiamine pyrophosphate enzyme, central domain FE384_00380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_00385 PF10369 Small subunit of acetolactate synthase FE384_00395 PF00356 Bacterial regulatory proteins, lacI family FE384_00395 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE384_00400 PF02381 MraZ protein, putative antitoxin-like FE384_00405 PF01795 MraW methylase family FE384_00410 PF04999 Cell division protein FtsL FE384_00415 PF03717 Penicillin-binding Protein dimerisation domain FE384_00415 PF00905 Penicillin binding protein transpeptidase domain FE384_00420 PF08245 Mur ligase middle domain FE384_00420 PF02875 Mur ligase family, glutamate ligase domain FE384_00420 PF01225 Mur ligase family, catalytic domain FE384_00425 PF01225 Mur ligase family, catalytic domain FE384_00425 PF02875 Mur ligase family, glutamate ligase domain FE384_00425 PF08245 Mur ligase middle domain FE384_00430 PF00953 Glycosyl transferase family 4 FE384_00430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FE384_00435 PF08245 Mur ligase middle domain FE384_00435 PF02875 Mur ligase family, glutamate ligase domain FE384_00440 PF01098 Cell cycle protein FE384_00445 PF03033 Glycosyltransferase family 28 N-terminal domain FE384_00445 PF04101 Glycosyltransferase family 28 C-terminal domain FE384_00450 PF01225 Mur ligase family, catalytic domain FE384_00450 PF02875 Mur ligase family, glutamate ligase domain FE384_00450 PF08245 Mur ligase middle domain FE384_00455 PF07478 D-ala D-ala ligase C-terminus FE384_00455 PF01820 D-ala D-ala ligase N-terminus FE384_00460 PF08478 POTRA domain, FtsQ-type FE384_00460 PF03799 Cell division protein FtsQ FE384_00465 PF02491 SHS2 domain inserted in FTSA FE384_00470 PF12327 FtsZ family, C-terminal domain FE384_00470 PF00091 Tubulin/FtsZ family, GTPase domain FE384_00475 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FE384_00480 PF06558 Secretion monitor precursor protein (SecM) FE384_00485 PF07517 SecA DEAD-like domain FE384_00485 PF01043 SecA preprotein cross-linking domain FE384_00485 PF07516 SecA Wing and Scaffold domain FE384_00485 PF02810 SEC-C motif FE384_00490 PF00293 NUDIX domain FE384_00495 PF03884 DNA gyrase inhibitor YacG FE384_00500 PF07072 Cell division protein FE384_00505 PF01121 Dephospho-CoA kinase FE384_00510 PF00478 IMP dehydrogenase / GMP reductase domain FE384_00515 PF00482 Type II secretion system (T2SS), protein F FE384_00520 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FE384_00520 PF00437 Type II/IV secretion system protein FE384_00525 PF07963 Prokaryotic N-terminal methylation motif FE384_00530 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FE384_00530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FE384_00535 PF01510 N-acetylmuramoyl-L-alanine amidase FE384_00540 PF17113 Regulatory signalling modulator protein AmpE FE384_00545 PF00324 Amino acid permease FE384_00550 PF07729 FCD domain FE384_00550 PF00392 Bacterial regulatory proteins, gntR family FE384_00555 PF00456 Transketolase, thiamine diphosphate binding domain FE384_00555 PF17831 Pyruvate dehydrogenase E1 component middle domain FE384_00560 PF00364 Biotin-requiring enzyme FE384_00560 PF02817 e3 binding domain FE384_00560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FE384_00565 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_00565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE384_00570 PF11737 Protein of unknown function (DUF3300) FE384_00575 PF06434 Aconitate hydratase 2 N-terminus FE384_00575 PF11791 Aconitate B N-terminal domain FE384_00575 PF00330 Aconitase family (aconitate hydratase) FE384_00580 PF06062 Uncharacterised protein family (UPF0231) FE384_00585 PF02675 S-adenosylmethionine decarboxylase FE384_00590 PF17284 Spermidine synthase tetramerisation domain FE384_00595 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FE384_00600 PF07732 Multicopper oxidase FE384_00600 PF00394 Multicopper oxidase FE384_00600 PF07731 Multicopper oxidase FE384_00605 PF01011 PQQ enzyme repeat FE384_00610 PF00156 Phosphoribosyl transferase domain FE384_00615 PF00484 Carbonic anhydrase FE384_00620 PF00005 ABC transporter FE384_00625 PF01061 ABC-2 type transporter FE384_00630 PF03610 PTS system fructose IIA component FE384_00635 PF01522 Polysaccharide deacetylase FE384_00640 PF02261 Aspartate decarboxylase FE384_00645 PF04754 Putative transposase, YhgA-like FE384_00650 PF02569 Pantoate-beta-alanine ligase FE384_00655 PF02548 Ketopantoate hydroxymethyltransferase FE384_00660 PF00419 Fimbrial protein FE384_00665 PF00419 Fimbrial protein FE384_00670 PF00419 Fimbrial protein FE384_00675 PF00419 Fimbrial protein FE384_00680 PF13954 PapC N-terminal domain FE384_00680 PF00577 Outer membrane usher protein FE384_00680 PF13953 PapC C-terminal domain FE384_00685 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_00685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_00690 PF00419 Fimbrial protein FE384_00695 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FE384_00700 PF01743 Poly A polymerase head domain FE384_00700 PF12626 Polymerase A arginine-rich C-terminus FE384_00700 PF12627 Probable RNA and SrmB- binding site of polymerase A FE384_00705 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE384_00710 PF01258 Prokaryotic dksA/traR C4-type zinc finger FE384_00715 PF17746 SfsA N-terminal OB domain FE384_00715 PF03749 Sugar fermentation stimulation protein RE domain FE384_00720 PF02834 LigT like Phosphoesterase FE384_00725 PF00271 Helicase conserved C-terminal domain FE384_00725 PF08482 ATP-dependent helicase C-terminal FE384_00725 PF04408 Helicase associated domain (HA2) FE384_00725 PF00270 DEAD/DEAH box helicase FE384_00730 PF00912 Transglycosylase FE384_00730 PF14814 Bifunctional transglycosylase second domain FE384_00730 PF00905 Penicillin binding protein transpeptidase domain FE384_00730 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal FE384_00735 PF00593 TonB dependent receptor FE384_00735 PF07715 TonB-dependent Receptor Plug Domain FE384_00740 PF00005 ABC transporter FE384_00745 PF01497 Periplasmic binding protein FE384_00750 PF01032 FecCD transport family FE384_00755 PF00202 Aminotransferase class-III FE384_00760 PF00654 Voltage gated chloride channel FE384_00770 PF01521 Iron-sulphur cluster biosynthesis FE384_00775 PF03458 UPF0126 domain FE384_00780 PF01497 Periplasmic binding protein FE384_00785 PF01048 Phosphorylase superfamily FE384_00790 PF13286 Phosphohydrolase-associated domain FE384_00790 PF01966 HD domain FE384_00795 PF00595 PDZ domain FE384_00800 PF13556 PucR C-terminal helix-turn-helix domain FE384_00800 PF17853 GGDEF-like domain FE384_00800 PF05651 Putative sugar diacid recognition FE384_00805 PF11944 Protein of unknown function (DUF3461) FE384_00815 PF00149 Calcineurin-like phosphoesterase FE384_00820 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_00820 PF14602 Hexapeptide repeat of succinyl-transferase FE384_00820 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FE384_00825 PF08335 GlnD PII-uridylyltransferase FE384_00825 PF01966 HD domain FE384_00825 PF01909 Nucleotidyltransferase domain FE384_00825 PF01842 ACT domain FE384_00830 PF00557 Metallopeptidase family M24 FE384_00835 PF00318 Ribosomal protein S2 FE384_00840 PF00889 Elongation factor TS FE384_00845 PF00696 Amino acid kinase family FE384_00850 PF01765 Ribosome recycling factor FE384_00855 PF13288 DXP reductoisomerase C-terminal domain FE384_00855 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FE384_00855 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FE384_00860 PF01255 Putative undecaprenyl diphosphate synthase FE384_00870 PF17820 PDZ domain FE384_00870 PF02163 Peptidase family M50 FE384_00875 PF07244 Surface antigen variable number repeat FE384_00875 PF01103 Surface antigen FE384_00880 PF03938 Outer membrane protein (OmpH-like) FE384_00885 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FE384_00885 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_00890 PF07977 FabA-like domain FE384_00895 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_00895 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FE384_00900 PF02684 Lipid-A-disaccharide synthetase FE384_00905 PF01351 Ribonuclease HII FE384_00910 PF02811 PHP domain FE384_00910 PF01336 OB-fold nucleic acid binding domain FE384_00910 PF07733 Bacterial DNA polymerase III alpha NTPase domain FE384_00910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FE384_00910 PF14579 Helix-hairpin-helix motif FE384_00915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FE384_00925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE384_00930 PF11734 TilS substrate C-terminal domain FE384_00930 PF09179 TilS substrate binding domain FE384_00930 PF01171 PP-loop family FE384_00935 PF07073 Modulator of Rho-dependent transcription termination (ROF) FE384_00940 PF06786 Uncharacterised protein family (UPF0253) FE384_00945 PF07152 YaeQ protein FE384_00950 PF00472 RF-1 domain FE384_00955 PF17185 NlpE C-terminal OB domain FE384_00955 PF04170 NlpE N-terminal domain FE384_00960 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FE384_00965 PF04073 Aminoacyl-tRNA editing domain FE384_00965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE384_00965 PF03129 Anticodon binding domain FE384_00970 PF18389 TrmO C-terminal domain FE384_00970 PF01980 tRNA-methyltransferase O FE384_00975 PF16358 RcsF lipoprotein FE384_00980 PF03180 NLPA lipoprotein FE384_00985 PF00528 Binding-protein-dependent transport system inner membrane component FE384_00990 PF00005 ABC transporter FE384_00990 PF09383 NIL domain FE384_01030 PF00248 Aldo/keto reductase family FE384_01035 PF03466 LysR substrate binding domain FE384_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_01040 PF03372 Endonuclease/Exonuclease/phosphatase family FE384_01045 PF08241 Methyltransferase domain FE384_01050 PF01464 Transglycosylase SLT domain FE384_01050 PF01476 LysM domain FE384_01055 PF16123 Hydroxyacylglutathione hydrolase C-terminus FE384_01055 PF00753 Metallo-beta-lactamase superfamily FE384_01060 PF08241 Methyltransferase domain FE384_01065 PF00075 RNase H FE384_01070 PF00929 Exonuclease FE384_01100 PF00795 Carbon-nitrogen hydrolase FE384_01110 PF02770 Acyl-CoA dehydrogenase, middle domain FE384_01110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE384_01110 PF09317 Domain of unknown function (DUF1974) FE384_01110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE384_01115 PF13580 SIS domain FE384_01120 PF13230 Glutamine amidotransferases class-II FE384_01125 PF03734 L,D-transpeptidase catalytic domain FE384_01130 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ FE384_01135 PF04221 RelB antitoxin FE384_01140 PF00877 NlpC/P60 family FE384_01150 PF00771 FHIPEP family FE384_01155 PF13677 Membrane MotB of proton-channel complex MotA/MotB FE384_01155 PF00691 OmpA family FE384_01160 PF11798 IMS family HHH motif FE384_01160 PF11799 impB/mucB/samB family C-terminal domain FE384_01160 PF00817 impB/mucB/samB family FE384_01170 PF13957 Toxin YafO, type II toxin-antitoxin system FE384_01175 PF13673 Acetyltransferase (GNAT) domain FE384_01185 PF00472 RF-1 domain FE384_01190 PF01546 Peptidase family M20/M25/M40 FE384_01190 PF07687 Peptidase dimerisation domain FE384_01195 PF00156 Phosphoribosyl transferase domain FE384_01200 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FE384_01215 PF07417 Sigma factor-binding transcriptional regulator Crl FE384_01220 PF00267 Gram-negative porin FE384_01225 PF00696 Amino acid kinase family FE384_01225 PF01472 PUA domain FE384_01230 PF00171 Aldehyde dehydrogenase family FE384_01240 PF06755 CbtA_toxin of type IV toxin-antitoxin system FE384_01245 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FE384_01250 PF06174 Protein of unknown function (DUF987) FE384_01255 PF04002 RadC-like JAB domain FE384_01260 PF03230 Antirestriction protein FE384_01265 PF06006 Bacterial protein of unknown function (DUF905) FE384_01290 PF06067 Domain of unknown function (DUF932) FE384_01295 PF01926 50S ribosome-binding GTPase FE384_01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_01300 PF03466 LysR substrate binding domain FE384_01315 PF00665 Integrase core domain FE384_01315 PF13936 Helix-turn-helix domain FE384_01335 PF01609 Transposase DDE domain FE384_01335 PF05598 Transposase domain (DUF772) FE384_01340 PF00324 Amino acid permease FE384_01345 PF02574 Homocysteine S-methyltransferase FE384_01350 PF08402 TOBE domain FE384_01350 PF00005 ABC transporter FE384_01380 PF07638 ECF sigma factor FE384_01400 PF13356 Arm DNA-binding domain FE384_01400 PF00589 Phage integrase family FE384_01410 PF03466 LysR substrate binding domain FE384_01415 PF02625 XdhC and CoxI family FE384_01415 PF13478 XdhC Rossmann domain FE384_01420 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE384_01420 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE384_01425 PF03450 CO dehydrogenase flavoprotein C-terminal domain FE384_01425 PF00941 FAD binding domain in molybdopterin dehydrogenase FE384_01430 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_01430 PF01799 [2Fe-2S] binding domain FE384_01435 PF07274 Protein of unknown function (DUF1440) FE384_01440 PF03692 Putative zinc- or iron-chelating domain FE384_01455 PF15976 CS1-pili formation C-terminal FE384_01455 PF16967 E-set like domain FE384_01460 PF18649 EcpB C-terminal domain FE384_01465 PF16449 Fimbrillin MatB FE384_01470 PF00196 Bacterial regulatory proteins, luxR family FE384_01480 PF00444 Ribosomal protein L36 FE384_01485 PF01197 Ribosomal protein L31 FE384_01500 PF11924 Inverse autotransporter, beta-domain FE384_01520 PF04224 Protein of unknown function, DUF417 FE384_01525 PF07338 Protein of unknown function (DUF1471) FE384_01530 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_01530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE384_01535 PF12833 Helix-turn-helix domain FE384_01535 PF12852 Cupin FE384_01540 PF02754 Cysteine-rich domain FE384_01545 PF13183 4Fe-4S dicluster domain FE384_01545 PF11870 Domain of unknown function (DUF3390) FE384_01545 PF02589 LUD domain FE384_01550 PF02589 LUD domain FE384_01560 PF05199 GMC oxidoreductase FE384_01560 PF00732 GMC oxidoreductase FE384_01565 PF00171 Aldehyde dehydrogenase family FE384_01570 PF00440 Bacterial regulatory proteins, tetR family FE384_01570 PF13977 BetI-type transcriptional repressor, C-terminal FE384_01575 PF02028 BCCT, betaine/carnitine/choline family transporter FE384_01585 PF00563 EAL domain FE384_01585 PF00196 Bacterial regulatory proteins, luxR family FE384_01590 PF03466 LysR substrate binding domain FE384_01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_01595 PF06496 Protein of unknown function (DUF1097) FE384_01600 PF12796 Ankyrin repeats (3 copies) FE384_01605 PF11392 Protein of unknown function (DUF2877) FE384_01610 PF02629 CoA binding domain FE384_01610 PF00549 CoA-ligase FE384_01615 PF06545 Protein of unknown function (DUF1116) FE384_01625 PF00696 Amino acid kinase family FE384_01630 PF07969 Amidohydrolase family FE384_01635 PF00107 Zinc-binding dehydrogenase FE384_01635 PF08240 Alcohol dehydrogenase GroES-like domain FE384_01650 PF01810 LysE type translocator FE384_01655 PF07338 Protein of unknown function (DUF1471) FE384_01660 PF00158 Sigma-54 interaction domain FE384_01660 PF02954 Bacterial regulatory protein, Fis family FE384_01660 PF06506 Propionate catabolism activator FE384_01670 PF00285 Citrate synthase, C-terminal domain FE384_01675 PF03972 MmgE/PrpD family FE384_01680 PF00501 AMP-binding enzyme FE384_01680 PF16177 Acetyl-coenzyme A synthetase N-terminus FE384_01680 PF13193 AMP-binding enzyme C-terminal domain FE384_01685 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FE384_01690 PF07969 Amidohydrolase family FE384_01695 PF03466 LysR substrate binding domain FE384_01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_01700 PF00484 Carbonic anhydrase FE384_01705 PF02560 Cyanate lyase C-terminal domain FE384_01710 PF07690 Major Facilitator Superfamily FE384_01715 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_01715 PF12464 Maltose acetyltransferase FE384_01720 PF01306 LacY proton/sugar symporter FE384_01725 PF02929 Beta galactosidase small chain FE384_01725 PF16353 Domain of unknown function(DUF4981) FE384_01725 PF00703 Glycosyl hydrolases family 2 FE384_01725 PF02837 Glycosyl hydrolases family 2, sugar binding domain FE384_01725 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FE384_01730 PF00356 Bacterial regulatory proteins, lacI family FE384_01735 PF09339 IclR helix-turn-helix domain FE384_01735 PF01614 Bacterial transcriptional regulator FE384_01740 PF01494 FAD binding domain FE384_01745 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FE384_01750 PF12697 Alpha/beta hydrolase family FE384_01755 PF01557 Fumarylacetoacetate (FAA) hydrolase family FE384_01760 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE384_01760 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FE384_01765 PF07836 DmpG-like communication domain FE384_01765 PF00682 HMGL-like FE384_01770 PF07690 Major Facilitator Superfamily FE384_01775 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FE384_01780 PF00756 Putative esterase FE384_01785 PF08240 Alcohol dehydrogenase GroES-like domain FE384_01785 PF00107 Zinc-binding dehydrogenase FE384_01790 PF02583 Metal-sensitive transcriptional repressor FE384_01800 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_01815 PF00535 Glycosyl transferase family 2 FE384_01825 PF02585 GlcNAc-PI de-N-acetylase FE384_01830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FE384_01835 PF00005 ABC transporter FE384_01840 PF00528 Binding-protein-dependent transport system inner membrane component FE384_01845 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FE384_01850 PF00490 Delta-aminolevulinic acid dehydratase FE384_01855 PF03797 Autotransporter beta-domain FE384_01855 PF03212 Pertactin FE384_01870 PF15977 Winged helix-turn-helix DNA binding FE384_01875 PF00144 Beta-lactamase FE384_01880 PF05992 SbmA/BacA-like family FE384_01885 PF07759 Protein of unknown function (DUF1615) FE384_01890 PF10954 Protein of unknown function (DUF2755) FE384_01895 PF10953 Protein of unknown function (DUF2754) FE384_01900 PF07478 D-ala D-ala ligase C-terminus FE384_01900 PF01820 D-ala D-ala ligase N-terminus FE384_01905 PF10796 Sigma-S stabilisation anti-adaptor protein FE384_01910 PF00245 Alkaline phosphatase FE384_01915 PF07769 psiF repeat FE384_01920 PF00990 Diguanylate cyclase, GGDEF domain FE384_01920 PF05230 MASE2 domain FE384_01925 PF14748 Pyrroline-5-carboxylate reductase dimerisation FE384_01925 PF03807 NADP oxidoreductase coenzyme F420-dependent FE384_01930 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FE384_01935 PF01202 Shikimate kinase FE384_01940 PF16362 YaiA protein FE384_01945 PF07302 AroM protein FE384_01950 PF06865 Pyrimidine/purine nucleoside phosphorylase FE384_01965 PF04381 Putative exonuclease, RdgC FE384_01970 PF00480 ROK family FE384_01975 PF07690 Major Facilitator Superfamily FE384_01980 PF13476 AAA domain FE384_01985 PF12320 Type 5 capsule protein repressor C-terminal domain FE384_01985 PF00149 Calcineurin-like phosphoesterase FE384_01990 PF00486 Transcriptional regulatory protein, C terminal FE384_01990 PF00072 Response regulator receiver domain FE384_01995 PF11808 Phosphate regulon sensor protein PhoR FE384_01995 PF00989 PAS fold FE384_01995 PF00512 His Kinase A (phospho-acceptor) domain FE384_01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_02000 PF05525 Branched-chain amino acid transport protein FE384_02005 PF00324 Amino acid permease FE384_02010 PF00128 Alpha amylase, catalytic domain FE384_02010 PF02903 Alpha amylase, N-terminal ig-like domain FE384_02015 PF04336 Acyl carrier protein phosphodiesterase FE384_02020 PF02547 Queuosine biosynthesis protein FE384_02025 PF01702 Queuine tRNA-ribosyltransferase FE384_02030 PF02699 Preprotein translocase subunit FE384_02035 PF07549 SecD/SecF GG Motif FE384_02035 PF13721 SecD export protein N-terminal TM region FE384_02035 PF02355 Protein export membrane protein FE384_02040 PF07549 SecD/SecF GG Motif FE384_02040 PF02355 Protein export membrane protein FE384_02045 PF01844 HNH endonuclease FE384_02050 PF03502 Nucleoside-specific channel-forming protein, Tsx FE384_02055 PF11622 Protein of unknown function (DUF3251) FE384_02060 PF03477 ATP cone domain FE384_02065 PF01872 RibD C-terminal domain FE384_02065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FE384_02070 PF00885 6,7-dimethyl-8-ribityllumazine synthase FE384_02075 PF01029 NusB family FE384_02080 PF00586 AIR synthase related protein, N-terminal domain FE384_02080 PF02769 AIR synthase related protein, C-terminal domain FE384_02085 PF04608 Phosphatidylglycerophosphatase A FE384_02090 PF00248 Aldo/keto reductase family FE384_02095 PF02779 Transketolase, pyrimidine binding domain FE384_02095 PF02780 Transketolase, C-terminal domain FE384_02095 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FE384_02100 PF00348 Polyprenyl synthetase FE384_02105 PF02609 Exonuclease VII small subunit FE384_02110 PF02926 THUMP domain FE384_02110 PF02568 Thiamine biosynthesis protein (ThiI) FE384_02115 PF01965 DJ-1/PfpI family FE384_02120 PF08546 Ketopantoate reductase PanE/ApbA C terminal FE384_02120 PF02558 Ketopantoate reductase PanE/ApbA FE384_02125 PF04461 Protein of unknown function (DUF520) FE384_02130 PF07690 Major Facilitator Superfamily FE384_02135 PF01040 UbiA prenyltransferase family FE384_02140 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FE384_02145 PF00510 Cytochrome c oxidase subunit III FE384_02150 PF00115 Cytochrome C and Quinol oxidase polypeptide I FE384_02155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FE384_02155 PF06481 COX Aromatic Rich Motif FE384_02160 PF07690 Major Facilitator Superfamily FE384_02165 PF03923 Uncharacterized lipoprotein FE384_02165 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FE384_02170 PF01722 BolA-like protein FE384_02175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE384_02175 PF05698 Bacterial trigger factor protein (TF) C-terminus FE384_02175 PF05697 Bacterial trigger factor protein (TF) FE384_02180 PF00574 Clp protease FE384_02185 PF10431 C-terminal, D2-small domain, of ClpB protein FE384_02185 PF06689 ClpX C4-type zinc finger FE384_02185 PF07724 AAA domain (Cdc48 subfamily) FE384_02190 PF00004 ATPase family associated with various cellular activities (AAA) FE384_02190 PF05362 Lon protease (S16) C-terminal proteolytic domain FE384_02190 PF02190 ATP-dependent protease La (LON) substrate-binding domain FE384_02195 PF00216 Bacterial DNA-binding protein FE384_02200 PF13145 PPIC-type PPIASE domain FE384_02215 PF06508 Queuosine biosynthesis protein QueC FE384_02220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_02220 PF12793 Sugar transport-related sRNA regulator N-term FE384_02230 PF13404 AsnC-type helix-turn-helix domain FE384_02230 PF01037 Lrp/AsnC ligand binding domain FE384_02235 PF00664 ABC transporter transmembrane region FE384_02235 PF00005 ABC transporter FE384_02240 PF00005 ABC transporter FE384_02240 PF00664 ABC transporter transmembrane region FE384_02245 PF00543 Nitrogen regulatory protein P-II FE384_02250 PF00909 Ammonium Transporter Family FE384_02260 PF09619 Type III secretion system lipoprotein chaperone (YscW) FE384_02265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FE384_02275 PF07237 Protein of unknown function (DUF1428) FE384_02280 PF12792 CSS motif domain associated with EAL FE384_02280 PF00563 EAL domain FE384_02285 PF10777 Inner membrane protein YlaC FE384_02290 PF14602 Hexapeptide repeat of succinyl-transferase FE384_02290 PF12464 Maltose acetyltransferase FE384_02295 PF05321 Haemolysin expression modulating protein FE384_02300 PF10757 Biofilm formation regulator YbaJ FE384_02305 PF00873 AcrB/AcrD/AcrF family FE384_02310 PF00529 HlyD membrane-fusion protein of T1SS FE384_02310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_02315 PF00440 Bacterial regulatory proteins, tetR family FE384_02315 PF08361 MAATS-type transcriptional repressor, C-terminal region FE384_02320 PF00924 Mechanosensitive ion channel FE384_02320 PF12794 Mechanosensitive ion channel inner membrane domain 1 FE384_02320 PF12795 Mechanosensitive ion channel porin domain FE384_02325 PF10689 Protein of unknown function (DUF2496) FE384_02330 PF07445 Primosomal replication protein priC FE384_02335 PF04304 Protein of unknown function (DUF454) FE384_02340 PF00156 Phosphoribosyl transferase domain FE384_02345 PF12170 DNA polymerase III tau subunit V interacting with alpha FE384_02345 PF12169 DNA polymerase III subunits gamma and tau domain III FE384_02345 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FE384_02350 PF02575 YbaB/EbfC DNA-binding family FE384_02355 PF13662 Toprim domain FE384_02355 PF02132 RecR protein FE384_02360 PF00183 Hsp90 protein FE384_02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_02365 PF05191 Adenylate kinase, active site lid FE384_02375 PF00762 Ferrochelatase FE384_02380 PF07859 alpha/beta hydrolase fold FE384_02385 PF00294 pfkB family carbohydrate kinase FE384_02390 PF02254 TrkA-N domain FE384_02390 PF00999 Sodium/hydrogen exchanger family FE384_02395 PF07690 Major Facilitator Superfamily FE384_02400 PF02872 5'-nucleotidase, C-terminal domain FE384_02400 PF00149 Calcineurin-like phosphoesterase FE384_02405 PF04073 Aminoacyl-tRNA editing domain FE384_02410 PF01963 TraB family FE384_02420 PF01381 Helix-turn-helix FE384_02425 PF00403 Heavy-metal-associated domain FE384_02430 PF04960 Glutaminase FE384_02435 PF13520 Amino acid permease FE384_02440 PF13411 MerR HTH family regulatory protein FE384_02445 PF01957 NfeD-like C-terminal, partner-binding FE384_02450 PF01145 SPFH domain / Band 7 family FE384_02450 PF16200 C-terminal region of band_7 FE384_02455 PF00005 ABC transporter FE384_02460 PF03649 Uncharacterised protein family (UPF0014) FE384_02465 PF00085 Thioredoxin FE384_02470 PF00106 short chain dehydrogenase FE384_02475 PF13472 GDSL-like Lipase/Acylhydrolase family FE384_02480 PF00005 ABC transporter FE384_02490 PF14220 Domain of unknown function (DUF4329) FE384_02490 PF05593 RHS Repeat FE384_02490 PF03527 RHS protein FE384_02495 PF15631 NTF2 fold immunity protein FE384_02520 PF03466 LysR substrate binding domain FE384_02520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_02525 PF04115 Ureidoglycolate lyase FE384_02530 PF01614 Bacterial transcriptional regulator FE384_02530 PF09339 IclR helix-turn-helix domain FE384_02535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_02535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE384_02535 PF00205 Thiamine pyrophosphate enzyme, central domain FE384_02540 PF01261 Xylose isomerase-like TIM barrel FE384_02545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE384_02545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE384_02550 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FE384_02555 PF01979 Amidohydrolase family FE384_02560 PF00860 Permease family FE384_02565 PF02595 Glycerate kinase family FE384_02570 PF07883 Cupin domain FE384_02570 PF05899 Protein of unknown function (DUF861) FE384_02575 PF01546 Peptidase family M20/M25/M40 FE384_02580 PF02615 Malate/L-lactate dehydrogenase FE384_02585 PF00549 CoA-ligase FE384_02585 PF02629 CoA binding domain FE384_02590 PF06545 Protein of unknown function (DUF1116) FE384_02595 PF11392 Protein of unknown function (DUF2877) FE384_02600 PF00696 Amino acid kinase family FE384_02605 PF02222 ATP-grasp domain FE384_02605 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FE384_02610 PF00731 AIR carboxylase FE384_02615 PF12850 Calcineurin-like phosphoesterase superfamily domain FE384_02620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FE384_02625 PF01406 tRNA synthetases class I (C) catalytic domain FE384_02625 PF09190 DALR domain FE384_02630 PF04307 LexA-binding, inner membrane-associated putative hydrolase FE384_02640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FE384_02640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FE384_02645 PF00419 Fimbrial protein FE384_02650 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_02650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_02655 PF00577 Outer membrane usher protein FE384_02655 PF13954 PapC N-terminal domain FE384_02655 PF13953 PapC C-terminal domain FE384_02660 PF00419 Fimbrial protein FE384_02665 PF00419 Fimbrial protein FE384_02670 PF00072 Response regulator receiver domain FE384_02670 PF00196 Bacterial regulatory proteins, luxR family FE384_02680 PF00589 Phage integrase family FE384_02710 PF00893 Small Multidrug Resistance protein FE384_02720 PF13408 Recombinase zinc beta ribbon domain FE384_02720 PF00239 Resolvase, N terminal domain FE384_02720 PF07508 Recombinase FE384_02725 PF01161 Phosphatidylethanolamine-binding protein FE384_02730 PF12833 Helix-turn-helix domain FE384_02750 PF07102 Protein of unknown function (DUF1364) FE384_02755 PF05866 Endodeoxyribonuclease RusA FE384_02765 PF06530 Phage antitermination protein Q FE384_02775 PF01609 Transposase DDE domain FE384_02775 PF05598 Transposase domain (DUF772) FE384_02780 PF00267 Gram-negative porin FE384_02785 PF04971 Bacteriophage P21 holin S FE384_02790 PF00959 Phage lysozyme FE384_02795 PF06085 Lipoprotein Rz1 precursor FE384_02800 PF06291 Bor protein FE384_02805 PF07166 Protein of unknown function (DUF1398) FE384_02815 PF13132 Domain of unknown function (DUF3950) FE384_02820 PF07471 Phage DNA packaging protein Nu1 FE384_02825 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FE384_02835 PF08242 Methyltransferase domain FE384_02845 PF12833 Helix-turn-helix domain FE384_02850 PF01278 Omptin family FE384_02855 PF12833 Helix-turn-helix domain FE384_02860 PF14488 Domain of unknown function (DUF4434) FE384_02865 PF13283 Bacteriophage N adsorption protein A C-term FE384_02870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FE384_02870 PF13632 Glycosyl transferase family group 2 FE384_02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_02875 PF00512 His Kinase A (phospho-acceptor) domain FE384_02875 PF00672 HAMP domain FE384_02880 PF00486 Transcriptional regulatory protein, C terminal FE384_02880 PF00072 Response regulator receiver domain FE384_02885 PF02321 Outer membrane efflux protein FE384_02890 PF11604 Copper binding periplasmic protein CusF FE384_02895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_02895 PF00529 HlyD membrane-fusion protein of T1SS FE384_02900 PF00873 AcrB/AcrD/AcrF family FE384_02905 PF00324 Amino acid permease FE384_02910 PF00924 Mechanosensitive ion channel FE384_02915 PF00881 Nitroreductase family FE384_02920 PF04237 YjbR FE384_02925 PF06643 Protein of unknown function (DUF1158) FE384_02930 PF04107 Glutamate-cysteine ligase family 2(GCS2) FE384_02940 PF01848 Hok/gef family FE384_02945 PF01609 Transposase DDE domain FE384_02950 PF01648 4'-phosphopantetheinyl transferase superfamily FE384_02950 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FE384_02955 PF00593 TonB dependent receptor FE384_02955 PF07715 TonB-dependent Receptor Plug Domain FE384_02960 PF00756 Putative esterase FE384_02960 PF11806 Domain of unknown function (DUF3327) FE384_02965 PF03621 MbtH-like protein FE384_02970 PF00975 Thioesterase domain FE384_02970 PF00501 AMP-binding enzyme FE384_02970 PF13193 AMP-binding enzyme C-terminal domain FE384_02970 PF00668 Condensation domain FE384_02970 PF00550 Phosphopantetheine attachment site FE384_02975 PF02706 Chain length determinant protein FE384_02980 PF00005 ABC transporter FE384_02985 PF01032 FecCD transport family FE384_02990 PF01032 FecCD transport family FE384_02995 PF05977 Transmembrane secretion effector FE384_03000 PF01497 Periplasmic binding protein FE384_03005 PF00425 chorismate binding enzyme FE384_03010 PF13193 AMP-binding enzyme C-terminal domain FE384_03010 PF00501 AMP-binding enzyme FE384_03015 PF00550 Phosphopantetheine attachment site FE384_03015 PF00857 Isochorismatase family FE384_03025 PF03061 Thioesterase superfamily FE384_03030 PF13722 5TM C-terminal transporter carbon starvation CstA FE384_03030 PF02554 Carbon starvation protein CstA FE384_03035 PF04328 Selenoprotein, putative FE384_03040 PF00465 Iron-containing alcohol dehydrogenase FE384_03045 PF00155 Aminotransferase class I and II FE384_03050 PF02195 ParB-like nuclease domain FE384_03055 PF01507 Phosphoadenosine phosphosulfate reductase family FE384_03055 PF11922 Domain of unknown function (DUF3440) FE384_03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_03060 PF03466 LysR substrate binding domain FE384_03065 PF13098 Thioredoxin-like domain FE384_03070 PF10417 C-terminal domain of 1-Cys peroxiredoxin FE384_03070 PF00578 AhpC/TSA family FE384_03075 PF13192 Thioredoxin domain FE384_03075 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_03080 PF00582 Universal stress protein family FE384_03085 PF08240 Alcohol dehydrogenase GroES-like domain FE384_03085 PF13823 Alcohol dehydrogenase GroES-associated FE384_03085 PF00107 Zinc-binding dehydrogenase FE384_03090 PF14760 Rnk N-terminus FE384_03090 PF01272 Transcription elongation factor, GreA/GreB, C-term FE384_03095 PF00445 Ribonuclease T2 family FE384_03100 PF00939 Sodium:sulfate symporter transmembrane region FE384_03105 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FE384_03110 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FE384_03115 PF04223 Citrate lyase, alpha subunit (CitF) FE384_03120 PF03328 HpcH/HpaI aldolase/citrate lyase family FE384_03125 PF06857 Malonate decarboxylase delta subunit (MdcD) FE384_03130 PF08218 Citrate lyase ligase C-terminal domain FE384_03135 PF17203 Single cache domain 3 FE384_03135 PF00989 PAS fold FE384_03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_03135 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FE384_03140 PF00072 Response regulator receiver domain FE384_03140 PF12431 Transcriptional regulator FE384_03145 PF03606 C4-dicarboxylate anaerobic carrier FE384_03150 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FE384_03155 PF00313 'Cold-shock' DNA-binding domain FE384_03160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FE384_03170 PF02416 mttA/Hcf106 family FE384_03175 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FE384_03175 PF04055 Radical SAM superfamily FE384_03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_03180 PF03466 LysR substrate binding domain FE384_03185 PF03099 Biotin/lipoate A/B protein ligase family FE384_03190 PF04359 Protein of unknown function (DUF493) FE384_03195 PF00768 D-alanyl-D-alanine carboxypeptidase FE384_03195 PF07943 Penicillin-binding protein 5, C-terminal domain FE384_03200 PF03330 Lytic transglycolase FE384_03200 PF05036 Sporulation related domain FE384_03205 PF01098 Cell cycle protein FE384_03210 PF03717 Penicillin-binding Protein dimerisation domain FE384_03210 PF00905 Penicillin binding protein transpeptidase domain FE384_03215 PF02590 Predicted SPOUT methyltransferase FE384_03225 PF00300 Histidine phosphatase superfamily (branch 1) FE384_03230 PF01467 Cytidylyltransferase-like FE384_03235 PF06144 DNA polymerase III, delta subunit FE384_03235 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FE384_03240 PF04390 Lipopolysaccharide-assembly FE384_03245 PF08264 Anticodon-binding domain of tRNA FE384_03245 PF00133 tRNA synthetases class I (I, L, M and V) FE384_03245 PF13603 Leucyl-tRNA synthetase, Domain 2 FE384_03250 PF07295 Zinc-ribbon containing domain FE384_03255 PF08238 Sel1 repeat FE384_03260 PF06889 Protein of unknown function (DUF1266) FE384_03270 PF08238 Sel1 repeat FE384_03275 PF06889 Protein of unknown function (DUF1266) FE384_03285 PF00012 Hsp70 protein FE384_03290 PF01156 Inosine-uridine preferring nucleoside hydrolase FE384_03295 PF00005 ABC transporter FE384_03300 PF00528 Binding-protein-dependent transport system inner membrane component FE384_03305 PF00528 Binding-protein-dependent transport system inner membrane component FE384_03310 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_03315 PF01609 Transposase DDE domain FE384_03315 PF05598 Transposase domain (DUF772) FE384_03320 PF00795 Carbon-nitrogen hydrolase FE384_03325 PF00571 CBS domain FE384_03325 PF03471 Transporter associated domain FE384_03330 PF02130 Uncharacterized protein family UPF0054 FE384_03335 PF02562 PhoH-like protein FE384_03340 PF04055 Radical SAM superfamily FE384_03340 PF01938 TRAM domain FE384_03340 PF00919 Uncharacterized protein family UPF0004 FE384_03345 PF01494 FAD binding domain FE384_03380 PF00733 Asparagine synthase FE384_03380 PF13537 Glutamine amidotransferase domain FE384_03385 PF13344 Haloacid dehalogenase-like hydrolase FE384_03390 PF00480 ROK family FE384_03390 PF01047 MarR family FE384_03395 PF01979 Amidohydrolase family FE384_03400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FE384_03405 PF00367 phosphotransferase system, EIIB FE384_03405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FE384_03405 PF02378 Phosphotransferase system, EIIC FE384_03410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FE384_03410 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE384_03415 PF03573 outer membrane porin, OprD family FE384_03420 PF13982 YbfN-like lipoprotein FE384_03425 PF01475 Ferric uptake regulator family FE384_03435 PF00258 Flavodoxin FE384_03440 PF01402 Ribbon-helix-helix protein, copG family FE384_03445 PF12697 Alpha/beta hydrolase family FE384_03450 PF03925 SeqA protein C-terminal domain FE384_03450 PF17206 SeqA protein N-terminal domain FE384_03455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE384_03455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE384_03455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE384_03455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE384_03475 PF13520 Amino acid permease FE384_03480 PF01276 Orn/Lys/Arg decarboxylase, major domain FE384_03480 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FE384_03480 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FE384_03490 PF00072 Response regulator receiver domain FE384_03490 PF00486 Transcriptional regulatory protein, C terminal FE384_03495 PF13492 GAF domain FE384_03495 PF02702 Osmosensitive K+ channel His kinase sensor domain FE384_03495 PF00512 His Kinase A (phospho-acceptor) domain FE384_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_03495 PF13493 Domain of unknown function (DUF4118) FE384_03500 PF02669 K+-transporting ATPase, c chain FE384_03510 PF03814 Potassium-transporting ATPase A subunit FE384_03515 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) FE384_03520 PF10725 Protein of unknown function (DUF2517) FE384_03525 PF05593 RHS Repeat FE384_03525 PF03527 RHS protein FE384_03560 PF08349 Protein of unknown function (DUF1722) FE384_03565 PF00875 DNA photolyase FE384_03565 PF03441 FAD binding domain of DNA photolyase FE384_03570 PF00854 POT family FE384_03575 PF01784 NIF3 (NGG1p interacting factor 3) FE384_03580 PF02682 Carboxyltransferase domain, subdomain C and D FE384_03585 PF02626 Carboxyltransferase domain, subdomain A and B FE384_03590 PF03746 LamB/YcsF family FE384_03595 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FE384_03595 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FE384_03595 PF06827 Zinc finger found in FPG and IleRS FE384_03600 PF05145 Transition state regulatory protein AbrB FE384_03605 PF00419 Fimbrial protein FE384_03610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_03610 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_03615 PF13953 PapC C-terminal domain FE384_03615 PF13954 PapC N-terminal domain FE384_03615 PF00577 Outer membrane usher protein FE384_03620 PF00419 Fimbrial protein FE384_03625 PF00285 Citrate synthase, C-terminal domain FE384_03635 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FE384_03640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FE384_03645 PF00890 FAD binding domain FE384_03645 PF02910 Fumarate reductase flavoprotein C-term FE384_03650 PF13085 2Fe-2S iron-sulfur cluster binding domain FE384_03655 PF16870 2-oxoglutarate dehydrogenase C-terminal FE384_03655 PF02779 Transketolase, pyrimidine binding domain FE384_03655 PF16078 2-oxoglutarate dehydrogenase N-terminus FE384_03655 PF00676 Dehydrogenase E1 component FE384_03660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FE384_03660 PF02817 e3 binding domain FE384_03660 PF00364 Biotin-requiring enzyme FE384_03665 PF00549 CoA-ligase FE384_03665 PF08442 ATP-grasp domain FE384_03670 PF02629 CoA binding domain FE384_03670 PF00549 CoA-ligase FE384_03675 PF00392 Bacterial regulatory proteins, gntR family FE384_03675 PF07702 UTRA domain FE384_03680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_03680 PF02378 Phosphotransferase system, EIIC FE384_03680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_03685 PF07748 Glycosyl hydrolases family 38 C-terminal domain FE384_03685 PF09261 Alpha mannosidase middle domain FE384_03685 PF01074 Glycosyl hydrolases family 38 N-terminal domain FE384_03690 PF01654 Cytochrome bd terminal oxidase subunit I FE384_03695 PF02322 Cytochrome bd terminal oxidase subunit II FE384_03700 PF08173 Membrane bound YbgT-like protein FE384_03705 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FE384_03710 PF03061 Thioesterase superfamily FE384_03715 PF01618 MotA/TolQ/ExbB proton channel family FE384_03720 PF02472 Biopolymer transport protein ExbD/TolR FE384_03725 PF06519 TolA C-terminal FE384_03730 PF07676 WD40-like Beta Propeller Repeat FE384_03730 PF04052 TolB amino-terminal domain FE384_03735 PF00691 OmpA family FE384_03740 PF13174 Tetratricopeptide repeat FE384_03740 PF16331 TolA binding protein trimerisation FE384_03785 PF02445 Quinolinate synthetase A protein FE384_03790 PF04973 Nicotinamide mononucleotide transporter FE384_03795 PF01545 Cation efflux family FE384_03800 PF13985 YbgS-like protein FE384_03805 PF00793 DAHP synthetase I family FE384_03810 PF00300 Histidine phosphatase superfamily (branch 1) FE384_03815 PF01263 Aldose 1-epimerase FE384_03820 PF00288 GHMP kinases N terminal domain FE384_03820 PF08544 GHMP kinases C terminal FE384_03820 PF10509 Galactokinase galactose-binding signature FE384_03825 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FE384_03825 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FE384_03830 PF16363 GDP-mannose 4,6 dehydratase FE384_03835 PF00005 ABC transporter FE384_03840 PF03459 TOBE domain FE384_03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_03845 PF10766 Multidrug efflux pump-associated protein AcrZ FE384_03855 PF00528 Binding-protein-dependent transport system inner membrane component FE384_03860 PF00005 ABC transporter FE384_03860 PF03459 TOBE domain FE384_03870 PF10282 Lactonase, 7-bladed beta-propeller FE384_03875 PF03466 LysR substrate binding domain FE384_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_03880 PF04303 PrpF protein FE384_03885 PF00939 Sodium:sulfate symporter transmembrane region FE384_03890 PF00694 Aconitase C-terminal domain FE384_03890 PF00330 Aconitase family (aconitate hydratase) FE384_03895 PF01095 Pectinesterase FE384_03900 PF01161 Phosphatidylethanolamine-binding protein FE384_03905 PF00202 Aminotransferase class-III FE384_03910 PF06968 Biotin and Thiamin Synthesis associated domain FE384_03910 PF04055 Radical SAM superfamily FE384_03915 PF00155 Aminotransferase class I and II FE384_03920 PF08241 Methyltransferase domain FE384_03930 PF12344 Ultra-violet resistance protein B FE384_03930 PF17757 UvrB interaction domain FE384_03930 PF02151 UvrB/uvrC motif FE384_03930 PF04851 Type III restriction enzyme, res subunit FE384_03930 PF00271 Helicase conserved C-terminal domain FE384_03935 PF01933 Uncharacterised protein family UPF0052 FE384_03940 PF06463 Molybdenum Cofactor Synthesis C FE384_03940 PF04055 Radical SAM superfamily FE384_03945 PF00994 Probable molybdopterin binding domain FE384_03950 PF01967 MoaC family FE384_03955 PF02597 ThiS family FE384_03960 PF02391 MoaE protein FE384_03965 PF01027 Inhibitor of apoptosis-promoting Bax1 FE384_03970 PF01027 Inhibitor of apoptosis-promoting Bax1 FE384_03975 PF03706 Lysylphosphatidylglycerol synthase TM region FE384_03980 PF13091 PLD-like domain FE384_03985 PF03372 Endonuclease/Exonuclease/phosphatase family FE384_03990 PF11076 Putative inner membrane protein YbhQ FE384_04005 PF00005 ABC transporter FE384_04010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_04015 PF00440 Bacterial regulatory proteins, tetR family FE384_04015 PF09209 Tetracyclin repressor-like, C-terminal domain FE384_04020 PF00271 Helicase conserved C-terminal domain FE384_04020 PF00270 DEAD/DEAH box helicase FE384_04025 PF08719 Domain of unknown function (DUF1768) FE384_04030 PF06733 DEAD_2 FE384_04030 PF13307 Helicase C-terminal domain FE384_04030 PF00270 DEAD/DEAH box helicase FE384_04035 PF02885 Glycosyl transferase family, helical bundle domain FE384_04040 PF02615 Malate/L-lactate dehydrogenase FE384_04045 PF07338 Protein of unknown function (DUF1471) FE384_04050 PF01258 Prokaryotic dksA/traR C4-type zinc finger FE384_04055 PF13640 2OG-Fe(II) oxygenase superfamily FE384_04055 PF18331 PKHD-type hydroxylase C-terminal domain FE384_04060 PF00593 TonB dependent receptor FE384_04060 PF07715 TonB-dependent Receptor Plug Domain FE384_04065 PF07338 Protein of unknown function (DUF1471) FE384_04070 PF05971 RNA methyltransferase FE384_04075 PF00924 Mechanosensitive ion channel FE384_04080 PF00005 ABC transporter FE384_04085 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04090 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_04095 PF00210 Ferritin-like domain FE384_04100 PF00892 EamA-like transporter family FE384_04110 PF13505 Outer membrane protein beta-barrel domain FE384_04115 PF00884 Sulfatase FE384_04125 PF01325 Iron dependent repressor, N-terminal DNA binding domain FE384_04125 PF02742 Iron dependent repressor, metal binding and dimerisation domain FE384_04130 PF03600 Citrate transporter FE384_04135 PF03734 L,D-transpeptidase catalytic domain FE384_04135 PF17969 L,D-transpeptidase C-terminal domain FE384_04140 PF12848 ABC transporter FE384_04140 PF00005 ABC transporter FE384_04145 PF07350 Protein of unknown function (DUF1479) FE384_04160 PF04055 Radical SAM superfamily FE384_04165 PF00923 Transaldolase/Fructose-6-phosphate aldolase FE384_04170 PF00899 ThiF family FE384_04175 PF00994 Probable molybdopterin binding domain FE384_04175 PF03454 MoeA C-terminal region (domain IV) FE384_04175 PF03453 MoeA N-terminal region (domain I and II) FE384_04180 PF01112 Asparaginase FE384_04185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_04185 PF00005 ABC transporter FE384_04190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_04195 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04200 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04200 PF12911 N-terminal TM domain of oligopeptide transport permease C FE384_04205 PF17153 Periplasmic sensor domain, extracellular FE384_04205 PF00563 EAL domain FE384_04210 PF17156 Gammaproteobacterial periplasmic sensor domain FE384_04210 PF00990 Diguanylate cyclase, GGDEF domain FE384_04215 PF04055 Radical SAM superfamily FE384_04215 PF00919 Uncharacterized protein family UPF0004 FE384_04215 PF18693 TRAM domain FE384_04220 PF10799 Biofilm formation protein (YliH/bssR) FE384_04225 PF07995 Glucose / Sorbosone dehydrogenase FE384_04230 PF13417 Glutathione S-transferase, N-terminal domain FE384_04230 PF00043 Glutathione S-transferase, C-terminal domain FE384_04235 PF07943 Penicillin-binding protein 5, C-terminal domain FE384_04235 PF00768 D-alanyl-D-alanine carboxypeptidase FE384_04240 PF08220 DeoR-like helix-turn-helix domain FE384_04240 PF00455 DeoR C terminal sensor domain FE384_04245 PF01569 PAP2 superfamily FE384_04250 PF07690 Major Facilitator Superfamily FE384_04265 PF07690 Major Facilitator Superfamily FE384_04270 PF00440 Bacterial regulatory proteins, tetR family FE384_04275 PF02080 TrkA-C domain FE384_04275 PF06826 Predicted Permease Membrane Region FE384_04280 PF11045 Putative inner membrane protein of Enterobacteriaceae FE384_04285 PF00462 Glutaredoxin FE384_04290 PF07214 Protein of unknown function (DUF1418) FE384_04295 PF00881 Nitroreductase family FE384_04300 PF08443 RimK-like ATP-grasp domain FE384_04300 PF18030 RimK PreATP-grasp domain FE384_04305 PF10722 Putative bacterial sensory transduction regulator FE384_04310 PF13416 Bacterial extracellular solute-binding protein FE384_04315 PF00005 ABC transporter FE384_04315 PF08402 TOBE domain FE384_04320 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04325 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04330 PF10767 Protein of unknown function (DUF2593) FE384_04335 PF05958 tRNA (Uracil-5-)-methyltransferase FE384_04340 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_04345 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04350 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04355 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_04360 PF00005 ABC transporter FE384_04365 PF12883 Protein of unknown function (DUF3828) FE384_04370 PF01906 Putative heavy-metal-binding FE384_04375 PF01510 N-acetylmuramoyl-L-alanine amidase FE384_04380 PF01370 NAD dependent epimerase/dehydratase family FE384_04385 PF11066 Protein of unknown function (DUF2867) FE384_04385 PF13460 NAD(P)H-binding FE384_04390 PF01212 Beta-eliminating lyase FE384_04395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE384_04395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_04395 PF00205 Thiamine pyrophosphate enzyme, central domain FE384_04400 PF00175 Oxidoreductase NAD-binding domain FE384_04400 PF00970 Oxidoreductase FAD-binding domain FE384_04400 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_04405 PF03063 Prismane/CO dehydrogenase family FE384_04410 PF03956 Lysine exporter LysO FE384_04415 PF00230 Major intrinsic protein FE384_04420 PF11398 Protein of unknown function (DUF2813) FE384_04425 PF04393 Protein of unknown function (DUF535) FE384_04430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_04435 PF02687 FtsX-like permease family FE384_04435 PF00005 ABC transporter FE384_04435 PF12704 MacB-like periplasmic core domain FE384_04440 PF00313 'Cold-shock' DNA-binding domain FE384_04445 PF02617 ATP-dependent Clp protease adaptor protein ClpS FE384_04450 PF00004 ATPase family associated with various cellular activities (AAA) FE384_04450 PF07724 AAA domain (Cdc48 subfamily) FE384_04450 PF17871 AAA lid domain FE384_04450 PF02861 Clp amino terminal domain, pathogenicity island component FE384_04450 PF10431 C-terminal, D2-small domain, of ClpB protein FE384_04465 PF01176 Translation initiation factor 1A / IF-1 FE384_04470 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FE384_04475 PF00664 ABC transporter transmembrane region FE384_04475 PF00005 ABC transporter FE384_04480 PF00664 ABC transporter transmembrane region FE384_04480 PF00005 ABC transporter FE384_04485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_04490 PF01037 Lrp/AsnC ligand binding domain FE384_04495 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FE384_04495 PF17854 FtsK alpha domain FE384_04495 PF09397 Ftsk gamma domain FE384_04495 PF01580 FtsK/SpoIIIE family FE384_04500 PF03548 Outer membrane lipoprotein carrier protein LolA FE384_04505 PF12002 MgsA AAA+ ATPase C terminal FE384_04505 PF16193 AAA C-terminal domain FE384_04505 PF00004 ATPase family associated with various cellular activities (AAA) FE384_04510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE384_04510 PF02403 Seryl-tRNA synthetase N-terminal domain FE384_04515 PF01568 Molydopterin dinucleotide binding domain FE384_04515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE384_04515 PF00384 Molybdopterin oxidoreductase FE384_04520 PF12800 4Fe-4S binding domain FE384_04520 PF13247 4Fe-4S dicluster domain FE384_04525 PF04976 DMSO reductase anchor subunit (DmsC) FE384_04530 PF00857 Isochorismatase family FE384_04535 PF07690 Major Facilitator Superfamily FE384_04540 PF13520 Amino acid permease FE384_04545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_04545 PF03466 LysR substrate binding domain FE384_04550 PF02525 Flavodoxin-like fold FE384_04555 PF04055 Radical SAM superfamily FE384_04560 PF01228 Glycine radical FE384_04560 PF02901 Pyruvate formate lyase-like FE384_04565 PF01226 Formate/nitrite transporter FE384_04570 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FE384_04570 PF18381 YcaO cyclodehydratase C-terminal domain FE384_04575 PF04239 Protein of unknown function (DUF421) FE384_04580 PF00266 Aminotransferase class-V FE384_04585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FE384_04590 PF01435 Peptidase family M48 FE384_04595 PF02224 Cytidylate kinase FE384_04600 PF00575 S1 RNA binding domain FE384_04605 PF00216 Bacterial DNA-binding protein FE384_04610 PF03772 Competence protein FE384_04610 PF00753 Metallo-beta-lactamase superfamily FE384_04615 PF00664 ABC transporter transmembrane region FE384_04615 PF00005 ABC transporter FE384_04620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FE384_04625 PF06224 Winged helix DNA-binding domain FE384_04630 PF03966 Trm112p-like protein FE384_04635 PF02348 Cytidylyltransferase FE384_04640 PF01636 Phosphotransferase enzyme family FE384_04645 PF02698 DUF218 domain FE384_04650 PF13847 Methyltransferase domain FE384_04655 PF03882 MukF winged-helix domain FE384_04655 PF17193 MukF C-terminal domain FE384_04655 PF17192 MukF middle domain FE384_04660 PF04288 MukE-like family FE384_04665 PF04310 MukB N-terminal FE384_04665 PF16330 MukB hinge domain FE384_04670 PF01471 Putative peptidoglycan binding domain FE384_04670 PF03734 L,D-transpeptidase catalytic domain FE384_04675 PF05951 Bacterial protein of unknown function (DUF882) FE384_04680 PF00753 Metallo-beta-lactamase superfamily FE384_04685 PF00155 Aminotransferase class I and II FE384_04690 PF00267 Gram-negative porin FE384_04695 PF00152 tRNA synthetases class II (D, K and N) FE384_04695 PF01336 OB-fold nucleic acid binding domain FE384_04700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FE384_04700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FE384_04705 PF11940 Domain of unknown function (DUF3458) Ig-like fold FE384_04705 PF01433 Peptidase family M1 domain FE384_04705 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FE384_04710 PF00005 ABC transporter FE384_04715 PF00528 Binding-protein-dependent transport system inner membrane component FE384_04720 PF00296 Luciferase-like monooxygenase FE384_04725 PF09084 NMT1/THI5 like FE384_04730 PF03358 NADPH-dependent FMN reductase FE384_04735 PF00419 Fimbrial protein FE384_04740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_04740 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_04745 PF13954 PapC N-terminal domain FE384_04745 PF00577 Outer membrane usher protein FE384_04745 PF13953 PapC C-terminal domain FE384_04750 PF00419 Fimbrial protein FE384_04755 PF00419 Fimbrial protein FE384_04760 PF00419 Fimbrial protein FE384_04765 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_04765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_04770 PF01180 Dihydroorotate dehydrogenase FE384_04775 PF07126 Cell-division protein ZapC FE384_04780 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_04780 PF03473 MOSC domain FE384_04780 PF03476 MOSC N-terminal beta barrel domain FE384_04785 PF10672 S-adenosylmethionine-dependent methyltransferase FE384_04785 PF01170 Putative RNA methylase family UPF0020 FE384_04785 PF02926 THUMP domain FE384_04790 PF12848 ABC transporter FE384_04790 PF00005 ABC transporter FE384_04790 PF16326 ABC transporter C-terminal domain FE384_04795 PF04403 Paraquat-inducible protein A FE384_04800 PF02470 MlaD protein FE384_04805 PF03886 ABC-type transport auxiliary lipoprotein component FE384_04810 PF04957 Ribosome modulation factor FE384_04815 PF07977 FabA-like domain FE384_04820 PF13654 AAA domain FE384_04820 PF05362 Lon protease (S16) C-terminal proteolytic domain FE384_04825 PF17414 MatP C-terminal ribbon-helix-helix domain FE384_04825 PF06303 MatP N-terminal domain FE384_04830 PF01389 OmpA-like transmembrane domain FE384_04830 PF00691 OmpA family FE384_04835 PF03846 Cell division inhibitor SulA FE384_04840 PF04994 TfoX C-terminal domain FE384_04840 PF04993 TfoX N-terminal domain FE384_04845 PF12805 FUSC-like inner membrane protein yccS FE384_04850 PF03733 Inner membrane component domain FE384_04855 PF12462 DNA helicase IV / RNA helicase N terminal FE384_04855 PF00580 UvrD/REP helicase N-terminal domain FE384_04855 PF13361 UvrD-like helicase C-terminal domain FE384_04860 PF02142 MGS-like domain FE384_04865 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FE384_04870 PF13380 CoA binding domain FE384_04875 PF08755 Hemimethylated DNA-binding protein YccV like FE384_04880 PF17785 PUA-like domain FE384_04880 PF10672 S-adenosylmethionine-dependent methyltransferase FE384_04885 PF00708 Acylphosphatase FE384_04890 PF04358 DsrC like protein FE384_04895 PF01027 Inhibitor of apoptosis-promoting Bax1 FE384_04905 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FE384_04905 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE384_04910 PF00374 Nickel-dependent hydrogenase FE384_04915 PF01292 Prokaryotic cytochrome b561 FE384_04920 PF01750 Hydrogenase maturation protease FE384_04925 PF07449 Hydrogenase-1 expression protein HyaE FE384_04930 PF04809 HupH hydrogenase expression protein, C-terminal conserved region FE384_04935 PF01654 Cytochrome bd terminal oxidase subunit I FE384_04940 PF02322 Cytochrome bd terminal oxidase subunit II FE384_04945 PF08173 Membrane bound YbgT-like protein FE384_04950 PF00328 Histidine phosphatase superfamily (branch 2) FE384_04955 PF02706 Chain length determinant protein FE384_04955 PF13807 G-rich domain on putative tyrosine kinase FE384_04955 PF13614 AAA domain FE384_04960 PF01451 Low molecular weight phosphotyrosine protein phosphatase FE384_04965 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FE384_04965 PF02563 Polysaccharide biosynthesis/export protein FE384_04965 PF10531 SLBB domain FE384_04970 PF06082 Exopolysaccharide biosynthesis protein YbjH FE384_04975 PF06251 Capsule biosynthesis GfcC FE384_04980 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FE384_04995 PF00313 'Cold-shock' DNA-binding domain FE384_05000 PF00313 'Cold-shock' DNA-binding domain FE384_05010 PF15939 Putative antitoxin of bacterial toxin-antitoxin system FE384_05015 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system FE384_05020 PF12801 4Fe-4S binding domain FE384_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_05025 PF01627 Hpt domain FE384_05025 PF00672 HAMP domain FE384_05025 PF00072 Response regulator receiver domain FE384_05025 PF00512 His Kinase A (phospho-acceptor) domain FE384_05030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE384_05035 PF00486 Transcriptional regulatory protein, C terminal FE384_05035 PF00072 Response regulator receiver domain FE384_05040 PF03264 NapC/NirT cytochrome c family, N-terminal region FE384_05045 PF18364 Molybdopterin oxidoreductase N-terminal domain FE384_05045 PF00384 Molybdopterin oxidoreductase FE384_05045 PF01568 Molydopterin dinucleotide binding domain FE384_05050 PF02613 Nitrate reductase delta subunit FE384_05060 PF01556 DnaJ C terminal domain FE384_05060 PF00226 DnaJ domain FE384_05070 PF00328 Histidine phosphatase superfamily (branch 2) FE384_05075 PF13993 YccJ-like protein FE384_05080 PF03358 NADPH-dependent FMN reductase FE384_05085 PF10685 Stress-induced bacterial acidophilic repeat motif FE384_05090 PF00860 Permease family FE384_05095 PF01613 Flavin reductase like domain FE384_05100 PF00881 Nitroreductase family FE384_05105 PF12697 Alpha/beta hydrolase family FE384_05110 PF01042 Endoribonuclease L-PSP FE384_05115 PF00857 Isochorismatase family FE384_05120 PF00296 Luciferase-like monooxygenase FE384_05130 PF00440 Bacterial regulatory proteins, tetR family FE384_05130 PF08362 YcdC-like protein, C-terminal region FE384_05135 PF01619 Proline dehydrogenase FE384_05135 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FE384_05135 PF00171 Aldehyde dehydrogenase family FE384_05135 PF14850 DNA-binding domain of Proline dehydrogenase FE384_05145 PF00474 Sodium:solute symporter family FE384_05155 PF09375 Imelysin FE384_05155 PF13473 Cupredoxin-like domain FE384_05160 PF04261 Dyp-type peroxidase family FE384_05165 PF02562 PhoH-like protein FE384_05170 PF13994 PgaD-like protein FE384_05175 PF00535 Glycosyl transferase family 2 FE384_05180 PF14883 Hypothetical glycosyl hydrolase family 13 FE384_05180 PF01522 Polysaccharide deacetylase FE384_05190 PF00990 Diguanylate cyclase, GGDEF domain FE384_05190 PF17158 Membrane-associated sensor, integral membrane domain FE384_05225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE384_05230 PF02811 PHP domain FE384_05235 PF02613 Nitrate reductase delta subunit FE384_05240 PF06496 Protein of unknown function (DUF1097) FE384_05250 PF10614 Type VIII secretion system (T8SS), CsgF protein FE384_05255 PF10627 Curli assembly protein CsgE FE384_05260 PF00196 Bacterial regulatory proteins, luxR family FE384_05265 PF07012 Curlin associated repeat FE384_05270 PF07012 Curlin associated repeat FE384_05275 PF10610 Thin aggregative fimbriae synthesis protein FE384_05285 PF01661 Macro domain FE384_05295 PF01757 Acyltransferase family FE384_05300 PF04349 Periplasmic glucan biosynthesis protein, MdoG FE384_05305 PF00535 Glycosyl transferase family 2 FE384_05310 PF07119 Protein of unknown function (DUF1375) FE384_05315 PF13984 MsyB protein FE384_05320 PF07690 Major Facilitator Superfamily FE384_05325 PF03279 Bacterial lipid A biosynthesis acyltransferase FE384_05335 PF04264 YceI-like domain FE384_05340 PF01292 Prokaryotic cytochrome b561 FE384_05345 PF10968 Protein of unknown function (DUF2770) FE384_05350 PF01266 FAD dependent oxidoreductase FE384_05355 PF13991 BssS protein family FE384_05360 PF06183 DinI-like family FE384_05365 PF01979 Amidohydrolase family FE384_05370 PF07273 Protein of unknown function (DUF1439) FE384_05375 PF13417 Glutathione S-transferase, N-terminal domain FE384_05375 PF04399 Glutaredoxin 2, C terminal domain FE384_05380 PF07690 Major Facilitator Superfamily FE384_05385 PF13302 Acetyltransferase (GNAT) domain FE384_05390 PF04337 Protein of unknown function, DUF480 FE384_05395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE384_05400 PF03023 Lipid II flippase MurJ FE384_05405 PF05130 FlgN protein FE384_05410 PF04316 Anti-sigma-28 factor, FlgM FE384_05415 PF13144 Chaperone for flagella basal body P-ring formation FE384_05420 PF00460 Flagella basal body rod protein FE384_05425 PF00460 Flagella basal body rod protein FE384_05425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE384_05430 PF13861 FlgD Tudor-like domain FE384_05430 PF13860 FlgD Ig-like domain FE384_05430 PF03963 Flagellar hook capping protein - N-terminal region FE384_05435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE384_05435 PF00460 Flagella basal body rod protein FE384_05435 PF07559 Flagellar basal body protein FlaE FE384_05440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE384_05440 PF00460 Flagella basal body rod protein FE384_05445 PF00460 Flagella basal body rod protein FE384_05445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE384_05450 PF02107 Flagellar L-ring protein FE384_05455 PF02119 Flagellar P-ring protein FE384_05460 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FE384_05460 PF10135 Rod binding protein FE384_05465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE384_05465 PF00460 Flagella basal body rod protein FE384_05470 PF00669 Bacterial flagellin N-terminal helical region FE384_05475 PF12111 Polyribonucleotide phosphorylase C terminal FE384_05475 PF10150 Ribonuclease E/G family FE384_05475 PF00575 S1 RNA binding domain FE384_05480 PF00849 RNA pseudouridylate synthase FE384_05480 PF01479 S4 domain FE384_05485 PF02545 Maf-like protein FE384_05490 PF02620 Large ribosomal RNA subunit accumulation protein YceD FE384_05495 PF01783 Ribosomal L32p protein family FE384_05500 PF02504 Fatty acid synthesis protein FE384_05505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FE384_05505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FE384_05510 PF00698 Acyl transferase domain FE384_05520 PF00550 Phosphopantetheine attachment site FE384_05525 PF00109 Beta-ketoacyl synthase, N-terminal domain FE384_05525 PF02801 Beta-ketoacyl synthase, C-terminal domain FE384_05530 PF01063 Amino-transferase class IV FE384_05535 PF02618 YceG-like family FE384_05540 PF02223 Thymidylate kinase FE384_05545 PF09115 DNA polymerase III, delta subunit, C terminal FE384_05550 PF01026 TatD related DNase FE384_05555 PF00367 phosphotransferase system, EIIB FE384_05555 PF02378 Phosphotransferase system, EIIC FE384_05560 PF00593 TonB dependent receptor FE384_05560 PF07715 TonB-dependent Receptor Plug Domain FE384_05565 PF01230 HIT domain FE384_05570 PF07233 Protein of unknown function (DUF1425) FE384_05575 PF13036 Peptidoglycan-synthase activator LpoB FE384_05580 PF01636 Phosphotransferase enzyme family FE384_05585 PF00933 Glycosyl hydrolase family 3 N terminal domain FE384_05590 PF05728 Uncharacterised protein family (UPF0227) FE384_05595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_05600 PF05433 Glycine zipper 2TM domain FE384_05605 PF00440 Bacterial regulatory proteins, tetR family FE384_05610 PF07338 Protein of unknown function (DUF1471) FE384_05615 PF03734 L,D-transpeptidase catalytic domain FE384_05615 PF01476 LysM domain FE384_05615 PF17969 L,D-transpeptidase C-terminal domain FE384_05620 PF00270 DEAD/DEAH box helicase FE384_05620 PF00271 Helicase conserved C-terminal domain FE384_05620 PF02559 CarD-like/TRCF domain FE384_05620 PF03461 TRCF domain FE384_05620 PF17757 UvrB interaction domain FE384_05625 PF01757 Acyltransferase family FE384_05630 PF12704 MacB-like periplasmic core domain FE384_05630 PF02687 FtsX-like permease family FE384_05635 PF00005 ABC transporter FE384_05640 PF02687 FtsX-like permease family FE384_05640 PF12704 MacB-like periplasmic core domain FE384_05645 PF00480 ROK family FE384_05650 PF02146 Sir2 family FE384_05655 PF04536 TPM domain FE384_05660 PF12158 Protein of unknown function (DUF3592) FE384_05670 PF00528 Binding-protein-dependent transport system inner membrane component FE384_05675 PF00528 Binding-protein-dependent transport system inner membrane component FE384_05680 PF08402 TOBE domain FE384_05680 PF00005 ABC transporter FE384_05685 PF01546 Peptidase family M20/M25/M40 FE384_05685 PF07687 Peptidase dimerisation domain FE384_05690 PF08007 Cupin superfamily protein FE384_05695 PF08918 PhoQ Sensor FE384_05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_05700 PF00072 Response regulator receiver domain FE384_05700 PF00486 Transcriptional regulatory protein, C terminal FE384_05705 PF00206 Lyase FE384_05705 PF08328 Adenylosuccinate lyase C-terminal FE384_05710 PF04356 Protein of unknown function (DUF489) FE384_05720 PF00293 NUDIX domain FE384_05725 PF00849 RNA pseudouridylate synthase FE384_05730 PF00180 Isocitrate/isopropylmalate dehydrogenase FE384_05735 PF08242 Methyltransferase domain FE384_05745 PF10463 Peptidase U49 FE384_05750 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain FE384_05750 PF00589 Phage integrase family FE384_05755 PF07825 Excisionase-like protein FE384_05775 PF00717 Peptidase S24-like FE384_05780 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT FE384_05795 PF03354 Phage Terminase FE384_05805 PF04860 Phage portal protein FE384_05810 PF04865 Baseplate J-like protein FE384_05815 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) FE384_05825 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FE384_05830 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FE384_05835 PF07484 Phage Tail Collar Domain FE384_05840 PF00239 Resolvase, N terminal domain FE384_05840 PF02796 Helix-turn-helix domain of resolvase FE384_05845 PF01844 HNH endonuclease FE384_05850 PF00180 Isocitrate/isopropylmalate dehydrogenase FE384_05865 PF07166 Protein of unknown function (DUF1398) FE384_05870 PF13411 MerR HTH family regulatory protein FE384_05875 PF04940 Sensors of blue-light using FAD FE384_05875 PF00563 EAL domain FE384_05880 PF10798 Biofilm development protein YmgB/AriR FE384_05900 PF12792 CSS motif domain associated with EAL FE384_05900 PF00563 EAL domain FE384_05910 PF03797 Autotransporter beta-domain FE384_05915 PF03797 Autotransporter beta-domain FE384_05920 PF16456 YmgD protein FE384_05925 PF13436 Glycine-zipper domain FE384_05950 PF03776 Septum formation topological specificity factor MinE FE384_05955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FE384_05960 PF05209 Septum formation inhibitor MinC, N-terminal domain FE384_05960 PF03775 Septum formation inhibitor MinC, C-terminal domain FE384_05965 PF05666 Fels-1 Prophage Protein-like FE384_05970 PF04151 Bacterial pre-peptidase C-terminal domain FE384_05975 PF05166 YcgL domain FE384_05980 PF01557 Fumarylacetoacetate (FAA) hydrolase family FE384_05985 PF03692 Putative zinc- or iron-chelating domain FE384_05990 PF06109 Haemolysin E (HlyE) FE384_05995 PF00717 Peptidase S24-like FE384_06000 PF11798 IMS family HHH motif FE384_06000 PF11799 impB/mucB/samB family C-terminal domain FE384_06000 PF00817 impB/mucB/samB family FE384_06000 PF13438 Domain of unknown function (DUF4113) FE384_06005 PF02600 Disulfide bond formation protein DsbB FE384_06010 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FE384_06015 PF07840 FadR C-terminal domain FE384_06015 PF00392 Bacterial regulatory proteins, gntR family FE384_06020 PF04293 SpoVR like protein FE384_06025 PF01266 FAD dependent oxidoreductase FE384_06030 PF00842 Alanine racemase, C-terminal domain FE384_06030 PF01168 Alanine racemase, N-terminal domain FE384_06035 PF02080 TrkA-C domain FE384_06035 PF00999 Sodium/hydrogen exchanger family FE384_06035 PF03471 Transporter associated domain FE384_06040 PF17676 LD-carboxypeptidase C-terminal domain FE384_06040 PF02016 LD-carboxypeptidase N-terminal domain FE384_06045 PF01464 Transglycosylase SLT domain FE384_06050 PF07317 Flagellar regulator YcgR FE384_06050 PF07238 PilZ domain FE384_06055 PF04226 Transglycosylase associated protein FE384_06065 PF01204 Trehalase FE384_06070 PF03610 PTS system fructose IIA component FE384_06070 PF05524 PEP-utilising enzyme, N-terminal FE384_06070 PF00391 PEP-utilising enzyme, mobile domain FE384_06070 PF00381 PTS HPr component phosphorylation site FE384_06075 PF02734 DAK2 domain FE384_06080 PF02733 Dak1 domain FE384_06085 PF00158 Sigma-54 interaction domain FE384_06085 PF00989 PAS fold FE384_06085 PF02954 Bacterial regulatory protein, Fis family FE384_06090 PF03212 Pertactin FE384_06090 PF03797 Autotransporter beta-domain FE384_06095 PF01926 50S ribosome-binding GTPase FE384_06095 PF06071 Protein of unknown function (DUF933) FE384_06100 PF01195 Peptidyl-tRNA hydrolase FE384_06105 PF10762 Protein of unknown function (DUF2583) FE384_06110 PF00916 Sulfate permease family FE384_06110 PF01740 STAS domain FE384_06115 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FE384_06115 PF14572 Phosphoribosyl synthetase-associated domain FE384_06120 PF08544 GHMP kinases C terminal FE384_06120 PF00288 GHMP kinases N terminal domain FE384_06125 PF03550 Outer membrane lipoprotein LolB FE384_06130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FE384_06130 PF01488 Shikimate / quinate 5-dehydrogenase FE384_06130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FE384_06135 PF03462 PCRF domain FE384_06135 PF00472 RF-1 domain FE384_06140 PF13847 Methyltransferase domain FE384_06140 PF17827 PrmC N-terminal domain FE384_06145 PF04247 Invasion gene expression up-regulator, SirB FE384_06150 PF13369 Transglutaminase-like superfamily FE384_06155 PF00793 DAHP synthetase I family FE384_06160 PF13940 Toxin Ldr, type I toxin-antitoxin system FE384_06170 PF13940 Toxin Ldr, type I toxin-antitoxin system FE384_06180 PF13940 Toxin Ldr, type I toxin-antitoxin system FE384_06190 PF01699 Sodium/calcium exchanger protein FE384_06195 PF06150 ChaB FE384_06200 PF04752 ChaC-like protein FE384_06205 PF02635 DsrE/DsrF-like family FE384_06210 PF11924 Inverse autotransporter, beta-domain FE384_06215 PF00072 Response regulator receiver domain FE384_06215 PF00196 Bacterial regulatory proteins, luxR family FE384_06220 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FE384_06220 PF00672 HAMP domain FE384_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_06220 PF07730 Histidine kinase FE384_06225 PF07690 Major Facilitator Superfamily FE384_06230 PF00384 Molybdopterin oxidoreductase FE384_06230 PF01568 Molydopterin dinucleotide binding domain FE384_06230 PF14710 Respiratory nitrate reductase alpha N-terminal FE384_06235 PF14711 Respiratory nitrate reductase beta C-terminal FE384_06235 PF13247 4Fe-4S dicluster domain FE384_06240 PF02613 Nitrate reductase delta subunit FE384_06245 PF02665 Nitrate reductase gamma subunit FE384_06280 PF01842 ACT domain FE384_06280 PF00551 Formyl transferase FE384_06285 PF02810 SEC-C motif FE384_06290 PF01734 Patatin-like phospholipase FE384_06295 PF00072 Response regulator receiver domain FE384_06300 PF00483 Nucleotidyl transferase FE384_06305 PF00816 H-NS histone family FE384_06310 PF00265 Thymidine kinase FE384_06320 PF00465 Iron-containing alcohol dehydrogenase FE384_06320 PF00171 Aldehyde dehydrogenase family FE384_06325 PF01914 MarC family integral membrane protein FE384_06330 PF05598 Transposase domain (DUF772) FE384_06330 PF01609 Transposase DDE domain FE384_06335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_06340 PF00528 Binding-protein-dependent transport system inner membrane component FE384_06345 PF00528 Binding-protein-dependent transport system inner membrane component FE384_06345 PF12911 N-terminal TM domain of oligopeptide transport permease C FE384_06350 PF00005 ABC transporter FE384_06350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_06355 PF00005 ABC transporter FE384_06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_06360 PF04269 Protein of unknown function, DUF440 FE384_06365 PF13396 Phospholipase_D-nuclease N-terminal FE384_06365 PF13091 PLD-like domain FE384_06375 PF07885 Ion channel FE384_06375 PF02254 TrkA-N domain FE384_06380 PF03795 YCII-related domain FE384_06385 PF03544 Gram-negative bacterial TonB protein C-terminal FE384_06390 PF03061 Thioesterase superfamily FE384_06395 PF04279 Intracellular septation protein A FE384_06410 PF03922 OmpW family FE384_06415 PF05974 Domain of unknown function (DUF892) FE384_06420 PF05974 Domain of unknown function (DUF892) FE384_06425 PF10685 Stress-induced bacterial acidophilic repeat motif FE384_06430 PF00290 Tryptophan synthase alpha chain FE384_06435 PF00291 Pyridoxal-phosphate dependent enzyme FE384_06440 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FE384_06440 PF00218 Indole-3-glycerol phosphate synthase FE384_06445 PF02885 Glycosyl transferase family, helical bundle domain FE384_06445 PF00117 Glutamine amidotransferase class-I FE384_06445 PF00591 Glycosyl transferase family, a/b domain FE384_06450 PF04715 Anthranilate synthase component I, N terminal region FE384_06450 PF00425 chorismate binding enzyme FE384_06455 PF08255 Trp-operon Leader Peptide FE384_06460 PF02811 PHP domain FE384_06465 PF01300 Telomere recombination FE384_06470 PF09972 Predicted membrane protein (DUF2207) FE384_06475 PF01479 S4 domain FE384_06475 PF00849 RNA pseudouridylate synthase FE384_06480 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FE384_06480 PF12557 Cob(I)alamin adenosyltransferase N terminal FE384_06485 PF00106 short chain dehydrogenase FE384_06490 PF08496 Peptidase family S49 N-terminal FE384_06490 PF01343 Peptidase family S49 FE384_06495 PF10692 Protein of unknown function (DUF2498) FE384_06500 PF01396 Topoisomerase DNA binding C4 zinc finger FE384_06500 PF08272 Topoisomerase I zinc-ribbon-like FE384_06500 PF01131 DNA topoisomerase FE384_06500 PF01751 Toprim domain FE384_06505 PF03466 LysR substrate binding domain FE384_06505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_06525 PF00330 Aconitase family (aconitate hydratase) FE384_06525 PF00694 Aconitase C-terminal domain FE384_06530 PF00925 GTP cyclohydrolase II FE384_06535 PF01569 PAP2 superfamily FE384_06540 PF06305 Lipopolysaccharide assembly protein A domain FE384_06545 PF18073 Rubredoxin metal binding domain FE384_06550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FE384_06555 PF01253 Translation initiation factor SUI1 FE384_06560 PF05433 Glycine zipper 2TM domain FE384_06565 PF00455 DeoR C terminal sensor domain FE384_06565 PF08220 DeoR-like helix-turn-helix domain FE384_06575 PF13426 PAS domain FE384_06575 PF00563 EAL domain FE384_06575 PF00990 Diguanylate cyclase, GGDEF domain FE384_06585 PF00575 S1 RNA binding domain FE384_06585 PF17876 Cold shock domain FE384_06585 PF08206 Ribonuclease B OB domain FE384_06585 PF00773 RNB domain FE384_06600 PF04480 Protein of unknown function (DUF559) FE384_06605 PF00005 ABC transporter FE384_06610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_06610 PF00005 ABC transporter FE384_06615 PF12911 N-terminal TM domain of oligopeptide transport permease C FE384_06615 PF00528 Binding-protein-dependent transport system inner membrane component FE384_06620 PF00528 Binding-protein-dependent transport system inner membrane component FE384_06625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_06630 PF10820 Protein of unknown function (DUF2543) FE384_06635 PF00324 Amino acid permease FE384_06645 PF00120 Glutamine synthetase, catalytic domain FE384_06650 PF07722 Peptidase C26 FE384_06655 PF01381 Helix-turn-helix FE384_06655 PF07883 Cupin domain FE384_06660 PF00171 Aldehyde dehydrogenase family FE384_06665 PF01266 FAD dependent oxidoreductase FE384_06670 PF00202 Aminotransferase class-III FE384_06675 PF02954 Bacterial regulatory protein, Fis family FE384_06675 PF00158 Sigma-54 interaction domain FE384_06680 PF04012 PspA/IM30 family FE384_06685 PF06667 Phage shock protein B FE384_06690 PF04024 PspC domain FE384_06695 PF09584 Phage shock protein PspD (Phageshock_PspD) FE384_06700 PF00581 Rhodanese-like domain FE384_06705 PF00128 Alpha amylase, catalytic domain FE384_06710 PF01547 Bacterial extracellular solute-binding protein FE384_06715 PF00528 Binding-protein-dependent transport system inner membrane component FE384_06720 PF00528 Binding-protein-dependent transport system inner membrane component FE384_06725 PF00107 Zinc-binding dehydrogenase FE384_06730 PF01261 Xylose isomerase-like TIM barrel FE384_06735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE384_06735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE384_06740 PF03633 Glycosyl hydrolase family 65, C-terminal domain FE384_06740 PF03636 Glycosyl hydrolase family 65, N-terminal domain FE384_06740 PF03632 Glycosyl hydrolase family 65 central catalytic domain FE384_06745 PF13419 Haloacid dehalogenase-like hydrolase FE384_06755 PF09381 Outer membrane protein G (OmpG) FE384_06760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE384_06760 PF00356 Bacterial regulatory proteins, lacI family FE384_06765 PF04317 YcjX-like family, DUF463 FE384_06770 PF05128 Domain of unknown function (DUF697) FE384_06775 PF00158 Sigma-54 interaction domain FE384_06775 PF13188 PAS domain FE384_06775 PF18024 Helix-turn-helix domain FE384_06780 PF08534 Redoxin FE384_06785 PF13378 Enolase C-terminal domain-like FE384_06785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FE384_06790 PF00246 Zinc carboxypeptidase FE384_06805 PF12146 Serine aminopeptidase, S33 FE384_06810 PF03466 LysR substrate binding domain FE384_06810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_06815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_06820 PF00924 Mechanosensitive ion channel FE384_06825 PF05598 Transposase domain (DUF772) FE384_06825 PF01609 Transposase DDE domain FE384_06830 PF10749 Protein of unknown function (DUF2534) FE384_06835 PF00582 Universal stress protein family FE384_06840 PF00027 Cyclic nucleotide-binding domain FE384_06840 PF00325 Bacterial regulatory proteins, crp family FE384_06845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FE384_06845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FE384_06850 PF03806 AbgT putative transporter family FE384_06855 PF01546 Peptidase family M20/M25/M40 FE384_06860 PF01546 Peptidase family M20/M25/M40 FE384_06860 PF07687 Peptidase dimerisation domain FE384_06865 PF03466 LysR substrate binding domain FE384_06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_06870 PF01713 Smr domain FE384_06875 PF08448 PAS fold FE384_06875 PF00990 Diguanylate cyclase, GGDEF domain FE384_06880 PF01544 CorA-like Mg2+ transporter protein FE384_06885 PF00271 Helicase conserved C-terminal domain FE384_06885 PF00270 DEAD/DEAH box helicase FE384_06885 PF03880 DbpA RNA binding domain FE384_06890 PF01171 PP-loop family FE384_06895 PF12167 Arm DNA-binding domain FE384_06895 PF00589 Phage integrase family FE384_06900 PF06806 Putative excisionase (DUF1233) FE384_06905 PF06688 Protein of unknown function (DUF1187) FE384_06915 PF03837 RecT family FE384_06920 PF06630 Enterobacterial exodeoxyribonuclease VIII FE384_06920 PF12684 PDDEXK-like domain of unknown function (DUF3799) FE384_06930 PF04181 Rtr1/RPAP2 family FE384_06940 PF14163 Super-infection exclusion protein B FE384_06945 PF07151 Protein of unknown function (DUF1391) FE384_06960 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT FE384_06965 PF06254 Putative bacterial toxin ydaT FE384_06970 PF07120 Protein of unknown function (DUF1376) FE384_06975 PF01695 IstB-like ATP binding protein FE384_06980 PF07789 Protein of unknown function (DUF1627) FE384_06985 PF06085 Lipoprotein Rz1 precursor FE384_06990 PF02386 Cation transport protein FE384_06995 PF02195 ParB-like nuclease domain FE384_07020 PF01609 Transposase DDE domain FE384_07020 PF05598 Transposase domain (DUF772) FE384_07025 PF13505 Outer membrane protein beta-barrel domain FE384_07030 PF03335 Phage tail fibre repeat FE384_07030 PF08400 Prophage tail fibre N-terminal FE384_07030 PF07484 Phage Tail Collar Domain FE384_07035 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FE384_07040 PF00239 Resolvase, N terminal domain FE384_07040 PF02796 Helix-turn-helix domain of resolvase FE384_07055 PF00582 Universal stress protein family FE384_07060 PF00267 Gram-negative porin FE384_07065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FE384_07065 PF10371 Domain of unknown function FE384_07065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FE384_07065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_07065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FE384_07070 PF03891 Domain of unknown function (DUF333) FE384_07075 PF03724 META domain FE384_07080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE384_07080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE384_07085 PF11739 Dicarboxylate transport FE384_07090 PF13617 YnbE-like lipoprotein FE384_07095 PF07027 Protein of unknown function (DUF1318) FE384_07100 PF14525 AraC-binding-like domain FE384_07100 PF12833 Helix-turn-helix domain FE384_07105 PF00171 Aldehyde dehydrogenase family FE384_07110 PF02728 Copper amine oxidase, N3 domain FE384_07110 PF07833 Copper amine oxidase N-terminal domain FE384_07110 PF01179 Copper amine oxidase, enzyme domain FE384_07110 PF02727 Copper amine oxidase, N2 domain FE384_07115 PF01575 MaoC like domain FE384_07115 PF00171 Aldehyde dehydrogenase family FE384_07120 PF05138 Phenylacetic acid catabolic protein FE384_07125 PF06243 Phenylacetic acid degradation B FE384_07130 PF05138 Phenylacetic acid catabolic protein FE384_07135 PF01883 Iron-sulfur cluster assembly protein FE384_07140 PF00175 Oxidoreductase NAD-binding domain FE384_07140 PF00970 Oxidoreductase FAD-binding domain FE384_07140 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_07145 PF00378 Enoyl-CoA hydratase/isomerase FE384_07150 PF00378 Enoyl-CoA hydratase/isomerase FE384_07155 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FE384_07155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE384_07155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE384_07160 PF03061 Thioesterase superfamily FE384_07165 PF02803 Thiolase, C-terminal domain FE384_07165 PF00108 Thiolase, N-terminal domain FE384_07170 PF14535 AMP-binding enzyme C-terminal domain FE384_07170 PF00501 AMP-binding enzyme FE384_07175 PF08223 PaaX-like protein C-terminal domain FE384_07175 PF07848 PaaX-like protein FE384_07180 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_07200 PF13936 Helix-turn-helix domain FE384_07200 PF00665 Integrase core domain FE384_07215 PF00248 Aldo/keto reductase family FE384_07220 PF10971 Protein of unknown function (DUF2773) FE384_07225 PF01066 CDP-alcohol phosphatidyltransferase FE384_07235 PF12146 Serine aminopeptidase, S33 FE384_07235 PF12147 Putative methyltransferase FE384_07240 PF00782 Dual specificity phosphatase, catalytic domain FE384_07245 PF02525 Flavodoxin-like fold FE384_07250 PF00271 Helicase conserved C-terminal domain FE384_07250 PF04408 Helicase associated domain (HA2) FE384_07250 PF11898 Domain of unknown function (DUF3418) FE384_07250 PF00270 DEAD/DEAH box helicase FE384_07250 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FE384_07255 PF02698 DUF218 domain FE384_07260 PF00171 Aldehyde dehydrogenase family FE384_07270 PF01292 Prokaryotic cytochrome b561 FE384_07280 PF01848 Hok/gef family FE384_07285 PF02203 Tar ligand binding domain homologue FE384_07285 PF00672 HAMP domain FE384_07285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE384_07290 PF03466 LysR substrate binding domain FE384_07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_07295 PF07063 Domain of unknown function (DUF1338) FE384_07300 PF04349 Periplasmic glucan biosynthesis protein, MdoG FE384_07305 PF04325 Protein of unknown function (DUF465) FE384_07310 PF13302 Acetyltransferase (GNAT) domain FE384_07315 PF18836 Beta solenoid repeat from YDCK FE384_07320 PF03595 Voltage-dependent anion channel FE384_07325 PF03848 Tellurite resistance protein TehB FE384_07330 PF11769 Protein of unknown function (DUF3313) FE384_07340 PF01385 Probable transposase FE384_07340 PF12323 Helix-turn-helix domain FE384_07340 PF07282 Putative transposase DNA-binding domain FE384_07345 PF03594 Benzoate membrane transport protein FE384_07350 PF07883 Cupin domain FE384_07350 PF01381 Helix-turn-helix FE384_07355 PF12392 Collagenase FE384_07355 PF01136 Peptidase family U32 FE384_07360 PF10829 Protein of unknown function (DUF2554) FE384_07365 PF07927 HicA toxin of bacterial toxin-antitoxin, FE384_07370 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system FE384_07370 PF01381 Helix-turn-helix FE384_07375 PF00155 Aminotransferase class I and II FE384_07375 PF00392 Bacterial regulatory proteins, gntR family FE384_07380 PF13416 Bacterial extracellular solute-binding protein FE384_07385 PF08402 TOBE domain FE384_07385 PF00005 ABC transporter FE384_07390 PF00528 Binding-protein-dependent transport system inner membrane component FE384_07395 PF00528 Binding-protein-dependent transport system inner membrane component FE384_07400 PF00171 Aldehyde dehydrogenase family FE384_07410 PF10753 Toxin GhoT_OrtT FE384_07415 PF10735 Protein of unknown function (DUF2526) FE384_07420 PF04657 Putative inner membrane exporter, YdcZ FE384_07425 PF00583 Acetyltransferase (GNAT) family FE384_07430 PF16884 N-terminal domain of oxidoreductase FE384_07430 PF00107 Zinc-binding dehydrogenase FE384_07435 PF00392 Bacterial regulatory proteins, gntR family FE384_07435 PF07729 FCD domain FE384_07440 PF00593 TonB dependent receptor FE384_07440 PF07715 TonB-dependent Receptor Plug Domain FE384_07450 PF00324 Amino acid permease FE384_07455 PF13417 Glutathione S-transferase, N-terminal domain FE384_07460 PF17520 Family of unknown function (DUF5445) FE384_07470 PF03527 RHS protein FE384_07490 PF13808 DDE_Tnp_1-associated FE384_07490 PF01609 Transposase DDE domain FE384_07495 PF01361 Tautomerase enzyme FE384_07500 PF01613 Flavin reductase like domain FE384_07505 PF00797 N-acetyltransferase FE384_07510 PF02567 Phenazine biosynthesis-like protein FE384_07515 PF02665 Nitrate reductase gamma subunit FE384_07520 PF02613 Nitrate reductase delta subunit FE384_07525 PF13247 4Fe-4S dicluster domain FE384_07525 PF14711 Respiratory nitrate reductase beta C-terminal FE384_07530 PF01568 Molydopterin dinucleotide binding domain FE384_07530 PF14710 Respiratory nitrate reductase alpha N-terminal FE384_07530 PF00384 Molybdopterin oxidoreductase FE384_07535 PF07690 Major Facilitator Superfamily FE384_07550 PF00267 Gram-negative porin FE384_07555 PF00892 EamA-like transporter family FE384_07565 PF09163 Formate dehydrogenase N, transmembrane FE384_07565 PF12800 4Fe-4S binding domain FE384_07565 PF13247 4Fe-4S dicluster domain FE384_07570 PF01292 Prokaryotic cytochrome b561 FE384_07575 PF01381 Helix-turn-helix FE384_07580 PF00107 Zinc-binding dehydrogenase FE384_07580 PF08240 Alcohol dehydrogenase GroES-like domain FE384_07585 PF03949 Malic enzyme, NAD binding domain FE384_07585 PF00390 Malic enzyme, N-terminal domain FE384_07590 PF08136 30S ribosomal protein subunit S22 family FE384_07595 PF10684 Putative biofilm-dependent modulation protein FE384_07600 PF02566 OsmC-like protein FE384_07605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_07605 PF00005 ABC transporter FE384_07610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_07610 PF00005 ABC transporter FE384_07615 PF12911 N-terminal TM domain of oligopeptide transport permease C FE384_07615 PF00528 Binding-protein-dependent transport system inner membrane component FE384_07620 PF00528 Binding-protein-dependent transport system inner membrane component FE384_07625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_07630 PF01427 D-ala-D-ala dipeptidase FE384_07635 PF13426 PAS domain FE384_07635 PF00990 Diguanylate cyclase, GGDEF domain FE384_07635 PF00563 EAL domain FE384_07640 PF00990 Diguanylate cyclase, GGDEF domain FE384_07650 PF13520 Amino acid permease FE384_07655 PF00282 Pyridoxal-dependent decarboxylase conserved domain FE384_07660 PF00675 Insulinase (Peptidase family M16) FE384_07660 PF05193 Peptidase M16 inactive domain FE384_07665 PF07715 TonB-dependent Receptor Plug Domain FE384_07670 PF00005 ABC transporter FE384_07670 PF06472 ABC transporter transmembrane region 2 FE384_07680 PF13186 Iron-sulfur cluster-binding domain FE384_07680 PF04055 Radical SAM superfamily FE384_07685 PF00884 Sulfatase FE384_07690 PF12833 Helix-turn-helix domain FE384_07695 PF17073 Two-component-system connector protein FE384_07700 PF00384 Molybdopterin oxidoreductase FE384_07705 PF09160 FimH, mannose binding FE384_07710 PF00419 Fimbrial protein FE384_07715 PF00419 Fimbrial protein FE384_07730 PF13657 HipA N-terminal domain FE384_07730 PF07804 HipA-like C-terminal domain FE384_07735 PF01381 Helix-turn-helix FE384_07740 PF03797 Autotransporter beta-domain FE384_07750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_07750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE384_07755 PF04198 Putative sugar-binding domain FE384_07760 PF00005 ABC transporter FE384_07765 PF02653 Branched-chain amino acid transport system / permease component FE384_07770 PF02653 Branched-chain amino acid transport system / permease component FE384_07775 PF13407 Periplasmic binding protein domain FE384_07780 PF01791 DeoC/LacD family aldolase FE384_07785 PF03992 Antibiotic biosynthesis monooxygenase FE384_07790 PF13649 Methyltransferase domain FE384_07795 PF01062 Bestrophin, RFP-TM, chloride channel FE384_07800 PF08125 Mannitol dehydrogenase C-terminal domain FE384_07800 PF01232 Mannitol dehydrogenase Rossmann domain FE384_07805 PF00990 Diguanylate cyclase, GGDEF domain FE384_07810 PF13811 Domain of unknown function (DUF4186) FE384_07815 PF04960 Glutaminase FE384_07820 PF00171 Aldehyde dehydrogenase family FE384_07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_07825 PF03466 LysR substrate binding domain FE384_07835 PF07690 Major Facilitator Superfamily FE384_07840 PF01914 MarC family integral membrane protein FE384_07845 PF01047 MarR family FE384_07850 PF12833 Helix-turn-helix domain FE384_07855 PF13999 MarB protein FE384_07860 PF00892 EamA-like transporter family FE384_07865 PF07690 Major Facilitator Superfamily FE384_07875 PF00990 Diguanylate cyclase, GGDEF domain FE384_07880 PF04076 Bacterial OB fold (BOF) protein FE384_07885 PF02464 Competence-damaged protein FE384_07890 PF01432 Peptidase family M3 FE384_07895 PF00106 short chain dehydrogenase FE384_07900 PF07729 FCD domain FE384_07900 PF00392 Bacterial regulatory proteins, gntR family FE384_07905 PF14001 YdfZ protein FE384_07910 PF01232 Mannitol dehydrogenase Rossmann domain FE384_07910 PF08125 Mannitol dehydrogenase C-terminal domain FE384_07915 PF07690 Major Facilitator Superfamily FE384_07915 PF00083 Sugar (and other) transporter FE384_07925 PF02796 Helix-turn-helix domain of resolvase FE384_07925 PF00239 Resolvase, N terminal domain FE384_07930 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FE384_07935 PF07484 Phage Tail Collar Domain FE384_07935 PF03335 Phage tail fibre repeat FE384_07940 PF07471 Phage DNA packaging protein Nu1 FE384_07945 PF13132 Domain of unknown function (DUF3950) FE384_07950 PF07166 Protein of unknown function (DUF1398) FE384_07955 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system FE384_07975 PF00313 'Cold-shock' DNA-binding domain FE384_07980 PF10721 Protein of unknown function (DUF2514) FE384_07985 PF00959 Phage lysozyme FE384_07990 PF07041 Protein of unknown function (DUF1327) FE384_07995 PF04971 Bacteriophage P21 holin S FE384_08000 PF00313 'Cold-shock' DNA-binding domain FE384_08005 PF00313 'Cold-shock' DNA-binding domain FE384_08015 PF03589 Antitermination protein FE384_08020 PF06147 Protein of unknown function (DUF968) FE384_08035 PF01848 Hok/gef family FE384_08040 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FE384_08045 PF04221 RelB antitoxin FE384_08055 PF14282 FlxA-like protein FE384_08075 PF01381 Helix-turn-helix FE384_08080 PF07151 Protein of unknown function (DUF1391) FE384_08095 PF05358 DicB protein FE384_08100 PF07358 Protein of unknown function (DUF1482) FE384_08125 PF00107 Zinc-binding dehydrogenase FE384_08125 PF08240 Alcohol dehydrogenase GroES-like domain FE384_08130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FE384_08130 PF13378 Enolase C-terminal domain-like FE384_08135 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FE384_08140 PF06932 Protein of unknown function (DUF1283) FE384_08145 PF13302 Acetyltransferase (GNAT) domain FE384_08150 PF06788 Uncharacterised protein family (UPF0257) FE384_08155 PF06649 Protein of unknown function (DUF1161) FE384_08160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE384_08160 PF01568 Molydopterin dinucleotide binding domain FE384_08160 PF00384 Molybdopterin oxidoreductase FE384_08165 PF01568 Molydopterin dinucleotide binding domain FE384_08165 PF00384 Molybdopterin oxidoreductase FE384_08165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE384_08170 PF13247 4Fe-4S dicluster domain FE384_08170 PF12800 4Fe-4S binding domain FE384_08175 PF04976 DMSO reductase anchor subunit (DmsC) FE384_08180 PF02613 Nitrate reductase delta subunit FE384_08185 PF00654 Voltage gated chloride channel FE384_08195 PF00480 ROK family FE384_08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_08200 PF03466 LysR substrate binding domain FE384_08205 PF07690 Major Facilitator Superfamily FE384_08220 PF00089 Trypsin FE384_08225 PF00893 Small Multidrug Resistance protein FE384_08230 PF00893 Small Multidrug Resistance protein FE384_08240 PF01594 AI-2E family transporter FE384_08245 PF02233 NAD(P) transhydrogenase beta subunit FE384_08250 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FE384_08250 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FE384_08250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FE384_08255 PF07338 Protein of unknown function (DUF1471) FE384_08260 PF13520 Amino acid permease FE384_08270 PF06942 GlpM protein FE384_08275 PF00486 Transcriptional regulatory protein, C terminal FE384_08275 PF00072 Response regulator receiver domain FE384_08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_08280 PF00672 HAMP domain FE384_08280 PF00512 His Kinase A (phospho-acceptor) domain FE384_08285 PF05472 DNA replication terminus site-binding protein (Ter protein) FE384_08290 PF00206 Lyase FE384_08290 PF10415 Fumarase C C-terminus FE384_08295 PF05681 Fumarate hydratase (Fumerase) FE384_08295 PF05683 Fumarase C-terminus FE384_08300 PF01238 Phosphomannose isomerase type I FE384_08305 PF06097 Bacterial protein of unknown function (DUF945) FE384_08310 PF03573 outer membrane porin, OprD family FE384_08320 PF02837 Glycosyl hydrolases family 2, sugar binding domain FE384_08320 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FE384_08320 PF00703 Glycosyl hydrolases family 2 FE384_08325 PF00440 Bacterial regulatory proteins, tetR family FE384_08335 PF00356 Bacterial regulatory proteins, lacI family FE384_08335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE384_08340 PF00367 phosphotransferase system, EIIB FE384_08340 PF02378 Phosphotransferase system, EIIC FE384_08345 PF00155 Aminotransferase class I and II FE384_08350 PF00962 Adenosine/AMP deaminase FE384_08355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE384_08355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE384_08365 PF05321 Haemolysin expression modulating protein FE384_08370 PF10754 Protein of unknown function (DUF2569) FE384_08375 PF02508 Rnf-Nqr subunit, membrane protein FE384_08380 PF04060 Putative Fe-S cluster FE384_08385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FE384_08385 PF12838 4Fe-4S dicluster domain FE384_08385 PF13375 RnfC Barrel sandwich hybrid domain FE384_08385 PF10531 SLBB domain FE384_08390 PF03116 NQR2, RnfD, RnfE family FE384_08395 PF04205 FMN-binding domain FE384_08400 PF02508 Rnf-Nqr subunit, membrane protein FE384_08405 PF00633 Helix-hairpin-helix motif FE384_08405 PF00730 HhH-GPD superfamily base excision DNA repair protein FE384_08405 PF10576 Iron-sulfur binding domain of endonuclease III FE384_08410 PF00854 POT family FE384_08415 PF00043 Glutathione S-transferase, C-terminal domain FE384_08415 PF02798 Glutathione S-transferase, N-terminal domain FE384_08420 PF08543 Phosphomethylpyrimidine kinase FE384_08425 PF00579 tRNA synthetases class I (W and Y) FE384_08425 PF01479 S4 domain FE384_08430 PF01243 Pyridoxamine 5'-phosphate oxidase FE384_08430 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FE384_08435 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FE384_08440 PF03702 Anhydro-N-acetylmuramic acid kinase FE384_08445 PF05433 Glycine zipper 2TM domain FE384_08450 PF01047 MarR family FE384_08455 PF07869 Protein of unknown function (DUF1656) FE384_08460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_08460 PF00529 HlyD membrane-fusion protein of T1SS FE384_08465 PF04632 Fusaric acid resistance protein family FE384_08470 PF00080 Copper/zinc superoxide dismutase (SODC) FE384_08475 PF00248 Aldo/keto reductase family FE384_08480 PF06945 Protein of unknown function (DUF1289) FE384_08485 PF00440 Bacterial regulatory proteins, tetR family FE384_08485 PF16925 Tetracyclin repressor-like, C-terminal domain FE384_08490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE384_08495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE384_08500 PF00929 Exonuclease FE384_08505 PF00270 DEAD/DEAH box helicase FE384_08505 PF08494 DEAD/H associated FE384_08505 PF00271 Helicase conserved C-terminal domain FE384_08510 PF00462 Glutaredoxin FE384_08515 PF00877 NlpC/P60 family FE384_08520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FE384_08520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FE384_08525 PF07690 Major Facilitator Superfamily FE384_08535 PF00356 Bacterial regulatory proteins, lacI family FE384_08540 PF03466 LysR substrate binding domain FE384_08540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_08545 PF07690 Major Facilitator Superfamily FE384_08555 PF00677 Lumazine binding domain FE384_08560 PF01554 MatE FE384_08565 PF03212 Pertactin FE384_08565 PF16168 Adhesin of bacterial autotransporter system, probable stalk FE384_08580 PF08803 Putative mono-oxygenase ydhR FE384_08585 PF13454 FAD-NAD(P)-binding FE384_08595 PF01292 Prokaryotic cytochrome b561 FE384_08600 PF13247 4Fe-4S dicluster domain FE384_08610 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain FE384_08610 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 FE384_08615 PF13247 4Fe-4S dicluster domain FE384_08615 PF12800 4Fe-4S binding domain FE384_08620 PF10965 Protein of unknown function (DUF2767) FE384_08625 PF02887 Pyruvate kinase, alpha/beta domain FE384_08625 PF00224 Pyruvate kinase, barrel domain FE384_08630 PF04728 Lipoprotein leucine-zipper FE384_08635 PF03734 L,D-transpeptidase catalytic domain FE384_08635 PF17969 L,D-transpeptidase C-terminal domain FE384_08635 PF01476 LysM domain FE384_08640 PF02657 Fe-S metabolism associated domain FE384_08645 PF00266 Aminotransferase class-V FE384_08650 PF01458 Uncharacterized protein family (UPF0051) FE384_08655 PF00005 ABC transporter FE384_08660 PF01458 Uncharacterized protein family (UPF0051) FE384_08665 PF01521 Iron-sulphur cluster biosynthesis FE384_08670 PF15930 Domain of unknown function FE384_08675 PF03061 Thioesterase superfamily FE384_08680 PF02913 FAD linked oxidases, C-terminal domain FE384_08680 PF13183 4Fe-4S dicluster domain FE384_08680 PF01565 FAD binding domain FE384_08685 PF01594 AI-2E family transporter FE384_08695 PF08965 Domain of unknown function (DUF1870) FE384_08700 PF07690 Major Facilitator Superfamily FE384_08705 PF07690 Major Facilitator Superfamily FE384_08710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FE384_08710 PF08501 Shikimate dehydrogenase substrate binding domain FE384_08715 PF01487 Type I 3-dehydroquinase FE384_08720 PF01144 Coenzyme A transferase FE384_08725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE384_08725 PF02770 Acyl-CoA dehydrogenase, middle domain FE384_08725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE384_08730 PF12833 Helix-turn-helix domain FE384_08730 PF02311 AraC-like ligand binding domain FE384_08735 PF01012 Electron transfer flavoprotein domain FE384_08740 PF01012 Electron transfer flavoprotein domain FE384_08740 PF00766 Electron transfer flavoprotein FAD-binding domain FE384_08745 PF01494 FAD binding domain FE384_08755 PF00501 AMP-binding enzyme FE384_08755 PF13193 AMP-binding enzyme C-terminal domain FE384_08760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FE384_08760 PF00391 PEP-utilising enzyme, mobile domain FE384_08760 PF02896 PEP-utilising enzyme, TIM barrel domain FE384_08765 PF03618 Kinase/pyrophosphorylase FE384_08770 PF00793 DAHP synthetase I family FE384_08775 PF10636 Hemin uptake protein hemP FE384_08780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FE384_08785 PF00563 EAL domain FE384_08790 PF00877 NlpC/P60 family FE384_08795 PF00005 ABC transporter FE384_08800 PF00255 Glutathione peroxidase FE384_08805 PF01032 FecCD transport family FE384_08810 PF00216 Bacterial DNA-binding protein FE384_08815 PF03483 B3/4 domain FE384_08815 PF03147 Ferredoxin-fold anticodon binding domain FE384_08815 PF01588 Putative tRNA binding domain FE384_08815 PF03484 tRNA synthetase B5 domain FE384_08815 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FE384_08820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FE384_08820 PF01409 tRNA synthetases class II core domain (F) FE384_08830 PF00453 Ribosomal protein L20 FE384_08835 PF01632 Ribosomal protein L35 FE384_08840 PF05198 Translation initiation factor IF-3, N-terminal domain FE384_08840 PF00707 Translation initiation factor IF-3, C-terminal domain FE384_08845 PF03129 Anticodon binding domain FE384_08845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FE384_08845 PF02824 TGS domain FE384_08845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE384_08860 PF04338 Protein of unknown function, DUF481 FE384_08865 PF00294 pfkB family carbohydrate kinase FE384_08870 PF11080 Endoribonuclease GhoS FE384_08880 PF14002 YniB-like protein FE384_08885 PF13419 Haloacid dehalogenase-like hydrolase FE384_08890 PF04307 LexA-binding, inner membrane-associated putative hydrolase FE384_08905 PF10729 Cell division activator CedA FE384_08910 PF00199 Catalase FE384_08910 PF06628 Catalase-related immune-responsive FE384_08910 PF18011 C-terminal domain found in long catalases FE384_08915 PF04794 YdjC-like protein FE384_08920 PF11975 Family 4 glycosyl hydrolase C-terminal domain FE384_08920 PF02056 Family 4 glycosyl hydrolase FE384_08925 PF12833 Helix-turn-helix domain FE384_08925 PF07883 Cupin domain FE384_08930 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FE384_08935 PF02378 Phosphotransferase system, EIIC FE384_08940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_08945 PF04355 SmpA / OmlA family FE384_08950 PF02540 NAD synthase FE384_08960 PF05962 HutD FE384_08965 PF07813 LTXXQ motif family protein FE384_08970 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FE384_08975 PF04996 Succinylarginine dihydrolase FE384_08980 PF00171 Aldehyde dehydrogenase family FE384_08985 PF04958 Arginine N-succinyltransferase beta subunit FE384_08990 PF00202 Aminotransferase class-III FE384_08995 PF03372 Endonuclease/Exonuclease/phosphatase family FE384_09000 PF09335 SNARE associated Golgi protein FE384_09010 PF09335 SNARE associated Golgi protein FE384_09015 PF02627 Carboxymuconolactone decarboxylase family FE384_09020 PF13416 Bacterial extracellular solute-binding protein FE384_09025 PF00528 Binding-protein-dependent transport system inner membrane component FE384_09030 PF00005 ABC transporter FE384_09035 PF00581 Rhodanese-like domain FE384_09040 PF01066 CDP-alcohol phosphatidyltransferase FE384_09045 PF00293 NUDIX domain FE384_09050 PF07383 Protein of unknown function (DUF1496) FE384_09055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FE384_09055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FE384_09060 PF06889 Protein of unknown function (DUF1266) FE384_09065 PF01751 Toprim domain FE384_09065 PF01131 DNA topoisomerase FE384_09070 PF00586 AIR synthase related protein, N-terminal domain FE384_09070 PF02769 AIR synthase related protein, C-terminal domain FE384_09075 PF00881 Nitroreductase family FE384_09080 PF01343 Peptidase family S49 FE384_09085 PF00710 Asparaginase, N-terminal FE384_09085 PF17763 Glutaminase/Asparaginase C-terminal domain FE384_09090 PF00857 Isochorismatase family FE384_09095 PF00083 Sugar (and other) transporter FE384_09100 PF08220 DeoR-like helix-turn-helix domain FE384_09100 PF00455 DeoR C terminal sensor domain FE384_09105 PF00248 Aldo/keto reductase family FE384_09110 PF00294 pfkB family carbohydrate kinase FE384_09115 PF01116 Fructose-bisphosphate aldolase class-II FE384_09120 PF00107 Zinc-binding dehydrogenase FE384_09120 PF08240 Alcohol dehydrogenase GroES-like domain FE384_09125 PF00083 Sugar (and other) transporter FE384_09130 PF00107 Zinc-binding dehydrogenase FE384_09130 PF08240 Alcohol dehydrogenase GroES-like domain FE384_09135 PF07023 Protein of unknown function (DUF1315) FE384_09140 PF01641 SelR domain FE384_09145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FE384_09145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FE384_09150 PF01263 Aldose 1-epimerase FE384_09155 PF00248 Aldo/keto reductase family FE384_09160 PF06629 MltA-interacting protein MipA FE384_09165 PF08298 PrkA AAA domain FE384_09165 PF06798 PrkA serine protein kinase C-terminal domain FE384_09170 PF04285 Protein of unknown function (DUF444) FE384_09175 PF17158 Membrane-associated sensor, integral membrane domain FE384_09175 PF00990 Diguanylate cyclase, GGDEF domain FE384_09180 PF00990 Diguanylate cyclase, GGDEF domain FE384_09180 PF17155 Gammaproteobacterial periplasmic sensor domain FE384_09185 PF04073 Aminoacyl-tRNA editing domain FE384_09195 PF04284 Protein of unknown function (DUF441) FE384_09200 PF02311 AraC-like ligand binding domain FE384_09200 PF12833 Helix-turn-helix domain FE384_09205 PF07690 Major Facilitator Superfamily FE384_09210 PF04343 Protein of unknown function, DUF488 FE384_09215 PF03891 Domain of unknown function (DUF333) FE384_09220 PF00990 Diguanylate cyclase, GGDEF domain FE384_09220 PF13185 GAF domain FE384_09235 PF04226 Transglycosylase associated protein FE384_09240 PF08956 Domain of unknown function (DUF1869) FE384_09245 PF09313 Domain of unknown function (DUF1971) FE384_09250 PF01810 LysE type translocator FE384_09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_09255 PF03466 LysR substrate binding domain FE384_09260 PF00180 Isocitrate/isopropylmalate dehydrogenase FE384_09265 PF02028 BCCT, betaine/carnitine/choline family transporter FE384_09270 PF00355 Rieske [2Fe-2S] domain FE384_09270 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FE384_09275 PF00970 Oxidoreductase FAD-binding domain FE384_09275 PF00175 Oxidoreductase NAD-binding domain FE384_09275 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_09280 PF01612 3'-5' exonuclease FE384_09280 PF00570 HRDC domain FE384_09285 PF00501 AMP-binding enzyme FE384_09285 PF13193 AMP-binding enzyme C-terminal domain FE384_09290 PF03843 Outer membrane lipoprotein Slp family FE384_09295 PF00814 Glycoprotease family FE384_09300 PF13307 Helicase C-terminal domain FE384_09300 PF04851 Type III restriction enzyme, res subunit FE384_09305 PF01042 Endoribonuclease L-PSP FE384_09310 PF08986 Domain of unknown function (DUF1889) FE384_09315 PF03701 Uncharacterised protein family (UPF0181) FE384_09320 PF04715 Anthranilate synthase component I, N terminal region FE384_09320 PF00425 chorismate binding enzyme FE384_09325 PF00293 NUDIX domain FE384_09330 PF03315 Serine dehydratase beta chain FE384_09330 PF03313 Serine dehydratase alpha chain FE384_09335 PF12792 CSS motif domain associated with EAL FE384_09335 PF00563 EAL domain FE384_09340 PF03471 Transporter associated domain FE384_09340 PF03741 Integral membrane protein TerC family FE384_09345 PF03610 PTS system fructose IIA component FE384_09345 PF03830 PTS system sorbose subfamily IIB component FE384_09350 PF03609 PTS system sorbose-specific iic component FE384_09355 PF03613 PTS system mannose/fructose/sorbose family IID component FE384_09360 PF06173 Protein of unknown function (DUF986) FE384_09365 PF02659 Putative manganese efflux pump FE384_09370 PF13847 Methyltransferase domain FE384_09375 PF00313 'Cold-shock' DNA-binding domain FE384_09380 PF10736 Protein of unknown function (DUF2627) FE384_09385 PF13974 YebO-like protein FE384_09390 PF13998 MgrB protein FE384_09395 PF13996 YobH-like protein FE384_09400 PF09339 IclR helix-turn-helix domain FE384_09400 PF01614 Bacterial transcriptional regulator FE384_09405 PF07690 Major Facilitator Superfamily FE384_09410 PF01435 Peptidase family M48 FE384_09415 PF03572 Peptidase family S41 FE384_09415 PF00595 PDZ domain FE384_09415 PF11818 C-terminal domain of tail specific protease (DUF3340) FE384_09415 PF17804 Tail specific protease N-terminal domain FE384_09420 PF17516 ProQ C-terminal domain FE384_09420 PF04352 ProQ/FINO family FE384_09425 PF13185 GAF domain FE384_09430 PF04403 Paraquat-inducible protein A FE384_09435 PF02470 MlaD protein FE384_09440 PF01189 16S rRNA methyltransferase RsmB/F FE384_09440 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FE384_09440 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FE384_09445 PF07351 Protein of unknown function (DUF1480) FE384_09450 PF07358 Protein of unknown function (DUF1482) FE384_09455 PF00149 Calcineurin-like phosphoesterase FE384_09460 PF10709 Protein of unknown function (DUF2511) FE384_09465 PF05425 Copper resistance protein D FE384_09470 PF04234 CopC domain FE384_09475 PF06440 DNA polymerase III, theta subunit FE384_09480 PF00795 Carbon-nitrogen hydrolase FE384_09485 PF00929 Exonuclease FE384_09490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FE384_09490 PF00326 Prolyl oligopeptidase family FE384_09495 PF04391 Protein of unknown function (DUF533) FE384_09500 PF13995 YebF-like protein FE384_09505 PF07130 YebG protein FE384_09510 PF02222 ATP-grasp domain FE384_09515 PF01081 KDPG and KHG aldolase FE384_09520 PF00920 Dehydratase family FE384_09525 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FE384_09525 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FE384_09530 PF01380 SIS domain FE384_09530 PF01418 Helix-turn-helix domain, rpiR family FE384_09535 PF00224 Pyruvate kinase, barrel domain FE384_09535 PF02887 Pyruvate kinase, alpha/beta domain FE384_09540 PF03279 Bacterial lipid A biosynthesis acyltransferase FE384_09545 PF01476 LysM domain FE384_09545 PF01551 Peptidase family M23 FE384_09545 PF08525 Opacity-associated protein A N-terminal motif FE384_09550 PF01297 Zinc-uptake complex component A periplasmic FE384_09555 PF00005 ABC transporter FE384_09560 PF00950 ABC 3 transport family FE384_09565 PF17864 RuvB AAA lid domain FE384_09565 PF05496 Holliday junction DNA helicase RuvB P-loop domain FE384_09565 PF05491 RuvB C-terminal winged helix domain FE384_09570 PF01330 RuvA N terminal domain FE384_09570 PF07499 RuvA, C-terminal domain FE384_09580 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FE384_09585 PF02075 Crossover junction endodeoxyribonuclease RuvC FE384_09590 PF01709 Transcriptional regulator FE384_09595 PF00293 NUDIX domain FE384_09600 PF00152 tRNA synthetases class II (D, K and N) FE384_09600 PF01336 OB-fold nucleic acid binding domain FE384_09600 PF02938 GAD domain FE384_09605 PF00857 Isochorismatase family FE384_09610 PF01904 Protein of unknown function DUF72 FE384_09615 PF01124 MAPEG family FE384_09620 PF13649 Methyltransferase domain FE384_09625 PF08003 Protein of unknown function (DUF1698) FE384_09630 PF00384 Molybdopterin oxidoreductase FE384_09630 PF18364 Molybdopterin oxidoreductase N-terminal domain FE384_09630 PF01568 Molydopterin dinucleotide binding domain FE384_09635 PF03264 NapC/NirT cytochrome c family, N-terminal region FE384_09640 PF03932 CutC family FE384_09645 PF06185 YecM protein FE384_09650 PF03485 Arginyl tRNA synthetase N terminal domain FE384_09650 PF00750 tRNA synthetases class I (R) FE384_09650 PF05746 DALR anticodon binding domain FE384_09655 PF07007 Lysozyme inhibitor LprI FE384_09660 PF06366 Flagellar protein FlhE FE384_09665 PF00771 FHIPEP family FE384_09670 PF01312 FlhB HrpN YscU SpaS Family FE384_09675 PF04344 Chemotaxis phosphatase, CheZ FE384_09680 PF00072 Response regulator receiver domain FE384_09685 PF00072 Response regulator receiver domain FE384_09685 PF01339 CheB methylesterase FE384_09690 PF01739 CheR methyltransferase, SAM binding domain FE384_09690 PF03705 CheR methyltransferase, all-alpha domain FE384_09695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE384_09695 PF02203 Tar ligand binding domain homologue FE384_09695 PF00672 HAMP domain FE384_09700 PF02203 Tar ligand binding domain homologue FE384_09700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE384_09700 PF00672 HAMP domain FE384_09705 PF01584 CheW-like domain FE384_09710 PF02895 Signal transducing histidine kinase, homodimeric domain FE384_09710 PF01584 CheW-like domain FE384_09710 PF09078 CheY binding FE384_09710 PF01627 Hpt domain FE384_09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_09715 PF00691 OmpA family FE384_09715 PF13677 Membrane MotB of proton-channel complex MotA/MotB FE384_09720 PF01618 MotA/TolQ/ExbB proton channel family FE384_09725 PF05280 Flagellar transcriptional activator (FlhC) FE384_09730 PF05247 Flagellar transcriptional activator (FlhD) FE384_09740 PF00582 Universal stress protein family FE384_09745 PF00982 Glycosyltransferase family 20 FE384_09750 PF02358 Trehalose-phosphatase FE384_09755 PF02653 Branched-chain amino acid transport system / permease component FE384_09760 PF00005 ABC transporter FE384_09765 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE384_09770 PF00210 Ferritin-like domain FE384_09775 PF10964 Protein of unknown function (DUF2766) FE384_09785 PF13992 YecR-like lipoprotein FE384_09790 PF00210 Ferritin-like domain FE384_09795 PF10678 Protein of unknown function (DUF2492) FE384_09800 PF03222 Tryptophan/tyrosine permease family FE384_09805 PF03695 Uncharacterised protein family (UPF0149) FE384_09805 PF02810 SEC-C motif FE384_09825 PF01066 CDP-alcohol phosphatidyltransferase FE384_09830 PF08459 UvrC Helix-hairpin-helix N-terminal FE384_09830 PF01541 GIY-YIG catalytic domain FE384_09830 PF02151 UvrB/uvrC motif FE384_09835 PF00196 Bacterial regulatory proteins, luxR family FE384_09835 PF00072 Response regulator receiver domain FE384_09845 PF10769 Protein of unknown function (DUF2594) FE384_09850 PF00196 Bacterial regulatory proteins, luxR family FE384_09850 PF03472 Autoinducer binding domain FE384_09865 PF00291 Pyridoxal-phosphate dependent enzyme FE384_09875 PF02899 Phage integrase, N-terminal SAM-like domain FE384_09880 PF04542 Sigma-70 region 2 FE384_09880 PF04539 Sigma-70 region 3 FE384_09880 PF04545 Sigma-70, region 4 FE384_09885 PF00700 Bacterial flagellin C-terminal helical region FE384_09885 PF08884 Flagellin D3 domain FE384_09885 PF00669 Bacterial flagellin N-terminal helical region FE384_09890 PF07195 Flagellar hook-associated protein 2 C-terminus FE384_09890 PF02465 Flagellar hook-associated protein 2 N-terminus FE384_09895 PF02561 Flagellar protein FliS FE384_09900 PF05400 Flagellar protein FliT FE384_09905 PF00128 Alpha amylase, catalytic domain FE384_09905 PF02806 Alpha amylase, C-terminal all-beta domain FE384_09910 PF13987 YedD-like protein FE384_09915 PF04143 Sulphur transport FE384_09920 PF01206 Sulfurtransferase TusA FE384_09925 PF02586 SOS response associated peptidase (SRAP) FE384_09930 PF00583 Acetyltransferase (GNAT) family FE384_09950 PF02049 Flagellar hook-basal body complex protein FliE FE384_09955 PF01514 Secretory protein of YscJ/FliF family FE384_09955 PF08345 Flagellar M-ring protein C-terminal FE384_09960 PF14842 FliG N-terminal domain FE384_09960 PF14841 FliG middle domain FE384_09960 PF01706 FliG C-terminal domain FE384_09965 PF02108 Flagellar assembly protein FliH FE384_09975 PF02050 Flagellar FliJ protein FE384_09980 PF02120 Flagellar hook-length control protein FliK FE384_09985 PF03748 Flagellar basal body-associated protein FliL FE384_09990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FE384_09990 PF02154 Flagellar motor switch protein FliM FE384_09995 PF16973 Flagellar motor switch protein FliN N-terminal FE384_09995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FE384_10000 PF04347 Flagellar biosynthesis protein, FliO FE384_10005 PF00813 FliP family FE384_10010 PF01313 Bacterial export proteins, family 3 FE384_10015 PF01311 Bacterial export proteins, family 1 FE384_10020 PF00196 Bacterial regulatory proteins, luxR family FE384_10025 PF10781 Dextransucrase DSRB FE384_10035 PF10733 Protein of unknown function (DUF2525) FE384_10045 PF00990 Diguanylate cyclase, GGDEF domain FE384_10045 PF17151 Periplasmic sensor domain FE384_10050 PF09926 Uncharacterized small protein (DUF2158) FE384_10055 PF05661 Protein of unknown function (DUF808) FE384_10060 PF00892 EamA-like transporter family FE384_10065 PF03852 DNA mismatch endonuclease Vsr FE384_10070 PF18284 DNA methylase N-terminal domain FE384_10070 PF00145 C-5 cytosine-specific DNA methylase FE384_10075 PF01966 HD domain FE384_10100 PF00512 His Kinase A (phospho-acceptor) domain FE384_10100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_10105 PF00072 Response regulator receiver domain FE384_10105 PF00486 Transcriptional regulatory protein, C terminal FE384_10110 PF00576 HIUase/Transthyretin family FE384_10115 PF00174 Oxidoreductase molybdopterin binding domain FE384_10120 PF01794 Ferric reductase like transmembrane component FE384_10125 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FE384_10130 PF01292 Prokaryotic cytochrome b561 FE384_10140 PF06167 Glucose-regulated metallo-peptidase M90 FE384_10150 PF09134 Invasin, domain 3 FE384_10150 PF11924 Inverse autotransporter, beta-domain FE384_10150 PF02369 Bacterial Ig-like domain (group 1) FE384_10160 PF00083 Sugar (and other) transporter FE384_10160 PF07690 Major Facilitator Superfamily FE384_10165 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FE384_10165 PF01048 Phosphorylase superfamily FE384_10170 PF01709 Transcriptional regulator FE384_10180 PF01554 MatE FE384_10190 PF03466 LysR substrate binding domain FE384_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_10195 PF03466 LysR substrate binding domain FE384_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_10205 PF17969 L,D-transpeptidase C-terminal domain FE384_10205 PF03734 L,D-transpeptidase catalytic domain FE384_10210 PF02277 Phosphoribosyltransferase FE384_10215 PF02654 Cobalamin-5-phosphate synthase FE384_10220 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FE384_10230 PF05598 Transposase domain (DUF772) FE384_10230 PF01609 Transposase DDE domain FE384_10265 PF03797 Autotransporter beta-domain FE384_10265 PF16168 Adhesin of bacterial autotransporter system, probable stalk FE384_10265 PF13018 Extended Signal Peptide of Type V secretion system FE384_10275 PF04002 RadC-like JAB domain FE384_10280 PF06174 Protein of unknown function (DUF987) FE384_10285 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FE384_10290 PF06755 CbtA_toxin of type IV toxin-antitoxin system FE384_10310 PF10662 Ethanolamine utilisation - propanediol utilisation FE384_10315 PF04363 Protein of unknown function (DUF496) FE384_10320 PF04632 Fusaric acid resistance protein family FE384_10325 PF06445 GyrI-like small molecule binding domain FE384_10330 PF07943 Penicillin-binding protein 5, C-terminal domain FE384_10330 PF00768 D-alanyl-D-alanine carboxypeptidase FE384_10335 PF08411 Exonuclease C-terminal FE384_10335 PF00929 Exonuclease FE384_10340 PF01206 Sulfurtransferase TusA FE384_10345 PF04143 Sulphur transport FE384_10350 PF13520 Amino acid permease FE384_10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_10360 PF03466 LysR substrate binding domain FE384_10365 PF01370 NAD dependent epimerase/dehydratase family FE384_10370 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FE384_10375 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FE384_10385 PF08029 HisG, C-terminal domain FE384_10385 PF01634 ATP phosphoribosyltransferase FE384_10390 PF00815 Histidinol dehydrogenase FE384_10395 PF00155 Aminotransferase class I and II FE384_10400 PF00475 Imidazoleglycerol-phosphate dehydratase FE384_10400 PF08645 Polynucleotide kinase 3 phosphatase FE384_10405 PF00117 Glutamine amidotransferase class-I FE384_10410 PF00977 Histidine biosynthesis protein FE384_10415 PF00977 Histidine biosynthesis protein FE384_10420 PF01502 Phosphoribosyl-AMP cyclohydrolase FE384_10420 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FE384_10425 PF02706 Chain length determinant protein FE384_10430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FE384_10430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FE384_10430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FE384_10435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FE384_10435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE384_10445 PF01609 Transposase DDE domain FE384_10445 PF05598 Transposase domain (DUF772) FE384_10455 PF00534 Glycosyl transferases group 1 FE384_10475 PF03275 UDP-galactopyranose mutase FE384_10480 PF01943 Polysaccharide biosynthesis protein FE384_10485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FE384_10500 PF00535 Glycosyl transferase family 2 FE384_10510 PF00534 Glycosyl transferases group 1 FE384_10510 PF13439 Glycosyltransferase Family 4 FE384_10515 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_10520 PF00535 Glycosyl transferase family 2 FE384_10530 PF01451 Low molecular weight phosphotyrosine protein phosphatase FE384_10535 PF02563 Polysaccharide biosynthesis/export protein FE384_10535 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FE384_10535 PF10531 SLBB domain FE384_10540 PF03471 Transporter associated domain FE384_10540 PF00571 CBS domain FE384_10540 PF03741 Integral membrane protein TerC family FE384_10545 PF05170 AsmA family FE384_10550 PF00692 dUTPase FE384_10555 PF00485 Phosphoribulokinase / Uridine kinase family FE384_10560 PF08448 PAS fold FE384_10560 PF13426 PAS domain FE384_10560 PF08447 PAS fold FE384_10560 PF05231 MASE1 FE384_10560 PF00990 Diguanylate cyclase, GGDEF domain FE384_10560 PF00563 EAL domain FE384_10565 PF00730 HhH-GPD superfamily base excision DNA repair protein FE384_10565 PF06029 AlkA N-terminal domain FE384_10570 PF00012 Hsp70 protein FE384_10580 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) FE384_10590 PF00092 von Willebrand factor type A domain FE384_10605 PF13533 Biotin-lipoyl like FE384_10610 PF00873 AcrB/AcrD/AcrF family FE384_10615 PF00873 AcrB/AcrD/AcrF family FE384_10620 PF07690 Major Facilitator Superfamily FE384_10625 PF00672 HAMP domain FE384_10625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_10625 PF00512 His Kinase A (phospho-acceptor) domain FE384_10630 PF00486 Transcriptional regulatory protein, C terminal FE384_10630 PF00072 Response regulator receiver domain FE384_10635 PF07411 Domain of unknown function (DUF1508) FE384_10645 PF04606 Ogr/Delta-like zinc finger FE384_10665 PF00781 Diacylglycerol kinase catalytic domain FE384_10680 PF08220 DeoR-like helix-turn-helix domain FE384_10685 PF08240 Alcohol dehydrogenase GroES-like domain FE384_10685 PF00107 Zinc-binding dehydrogenase FE384_10690 PF03611 PTS system sugar-specific permease component FE384_10695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_10700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_10705 PF08013 Tagatose 6 phosphate kinase FE384_10710 PF01116 Fructose-bisphosphate aldolase class-II FE384_10715 PF01791 DeoC/LacD family aldolase FE384_10720 PF03825 Nucleoside H+ symporter FE384_10725 PF03747 ADP-ribosylglycohydrolase FE384_10730 PF00294 pfkB family carbohydrate kinase FE384_10735 PF00392 Bacterial regulatory proteins, gntR family FE384_10735 PF07702 UTRA domain FE384_10740 PF01183 Glycosyl hydrolases family 25 FE384_10745 PF08543 Phosphomethylpyrimidine kinase FE384_10750 PF02110 Hydroxyethylthiazole kinase family FE384_10755 PF02583 Metal-sensitive transcriptional repressor FE384_10760 PF03824 High-affinity nickel-transport protein FE384_10765 PF11776 Nickel/cobalt transporter regulator FE384_10770 PF00419 Fimbrial protein FE384_10775 PF00577 Outer membrane usher protein FE384_10775 PF13953 PapC C-terminal domain FE384_10775 PF13954 PapC N-terminal domain FE384_10780 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_10780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_10785 PF00419 Fimbrial protein FE384_10790 PF10836 Protein of unknown function (DUF2574) FE384_10795 PF10609 NUBPL iron-transfer P-loop NTPase FE384_10800 PF09334 tRNA synthetases class I (M) FE384_10800 PF01588 Putative tRNA binding domain FE384_10810 PF13569 Domain of unknown function (DUF4132) FE384_10820 PF07728 AAA domain (dynein-related subfamily) FE384_10830 PF05762 VWA domain containing CoxE-like protein FE384_10835 PF04434 SWIM zinc finger FE384_10840 PF06998 Protein of unknown function (DUF1307) FE384_10845 PF07308 Protein of unknown function (DUF1456) FE384_10850 PF04397 LytTr DNA-binding domain FE384_10850 PF00072 Response regulator receiver domain FE384_10855 PF06580 Histidine kinase FE384_10855 PF07694 5TMR of 5TMR-LYT FE384_10860 PF13411 MerR HTH family regulatory protein FE384_10870 PF00528 Binding-protein-dependent transport system inner membrane component FE384_10875 PF00005 ABC transporter FE384_10880 PF00528 Binding-protein-dependent transport system inner membrane component FE384_10885 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FE384_10890 PF00933 Glycosyl hydrolase family 3 N terminal domain FE384_10890 PF01915 Glycosyl hydrolase family 3 C-terminal domain FE384_10890 PF14310 Fibronectin type III-like domain FE384_10895 PF09330 D-lactate dehydrogenase, membrane binding FE384_10895 PF01565 FAD binding domain FE384_10900 PF00768 D-alanyl-D-alanine carboxypeptidase FE384_10905 PF04893 Yip1 domain FE384_10910 PF09335 SNARE associated Golgi protein FE384_10930 PF01207 Dihydrouridine synthase (Dus) FE384_10935 PF03788 LrgA family FE384_10940 PF04172 LrgB-like family FE384_10945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FE384_10945 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FE384_10950 PF02698 DUF218 domain FE384_10955 PF10808 Protein of unknown function (DUF2542) FE384_10960 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_10960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE384_10965 PF01180 Dihydroorotate dehydrogenase FE384_10970 PF02653 Branched-chain amino acid transport system / permease component FE384_10975 PF00005 ABC transporter FE384_10980 PF13407 Periplasmic binding protein domain FE384_10985 PF00356 Bacterial regulatory proteins, lacI family FE384_10990 PF04235 Protein of unknown function (DUF418) FE384_10995 PF01227 GTP cyclohydrolase I FE384_11000 PF00756 Putative esterase FE384_11005 PF07715 TonB-dependent Receptor Plug Domain FE384_11005 PF00593 TonB dependent receptor FE384_11010 PF00324 Amino acid permease FE384_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_11015 PF03466 LysR substrate binding domain FE384_11020 PF03601 Conserved hypothetical protein 698 FE384_11025 PF01261 Xylose isomerase-like TIM barrel FE384_11030 PF00294 pfkB family carbohydrate kinase FE384_11035 PF01773 Na+ dependent nucleoside transporter N-terminus FE384_11035 PF07662 Na+ dependent nucleoside transporter C-terminus FE384_11040 PF01156 Inosine-uridine preferring nucleoside hydrolase FE384_11045 PF00027 Cyclic nucleotide-binding domain FE384_11050 PF07662 Na+ dependent nucleoside transporter C-terminus FE384_11050 PF01773 Na+ dependent nucleoside transporter N-terminus FE384_11055 PF04227 Indigoidine synthase A like protein FE384_11060 PF00294 pfkB family carbohydrate kinase FE384_11065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_11065 PF02378 Phosphotransferase system, EIIC FE384_11070 PF00294 pfkB family carbohydrate kinase FE384_11075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_11075 PF00381 PTS HPr component phosphorylation site FE384_11080 PF07690 Major Facilitator Superfamily FE384_11085 PF03692 Putative zinc- or iron-chelating domain FE384_11090 PF01132 Elongation factor P (EF-P) OB domain FE384_11090 PF09285 Elongation factor P, C-terminal FE384_11090 PF08207 Elongation factor P (EF-P) KOW-like domain FE384_11095 PF01232 Mannitol dehydrogenase Rossmann domain FE384_11095 PF08125 Mannitol dehydrogenase C-terminal domain FE384_11100 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE384_11100 PF07683 Cobalamin synthesis protein cobW C-terminal domain FE384_11105 PF01569 PAP2 superfamily FE384_11110 PF00877 NlpC/P60 family FE384_11115 PF00563 EAL domain FE384_11115 PF12792 CSS motif domain associated with EAL FE384_11120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_11125 PF00528 Binding-protein-dependent transport system inner membrane component FE384_11130 PF12911 N-terminal TM domain of oligopeptide transport permease C FE384_11130 PF00528 Binding-protein-dependent transport system inner membrane component FE384_11135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_11135 PF00005 ABC transporter FE384_11140 PF13989 YejG-like protein FE384_11145 PF07690 Major Facilitator Superfamily FE384_11150 PF01479 S4 domain FE384_11150 PF00849 RNA pseudouridylate synthase FE384_11155 PF00271 Helicase conserved C-terminal domain FE384_11155 PF04851 Type III restriction enzyme, res subunit FE384_11160 PF01386 Ribosomal L25p family FE384_11165 PF04245 37-kD nucleoid-associated bacterial protein FE384_11170 PF07208 Protein of unknown function (DUF1414) FE384_11175 PF00884 Sulfatase FE384_11175 PF11893 Domain of unknown function (DUF3413) FE384_11190 PF05598 Transposase domain (DUF772) FE384_11190 PF01609 Transposase DDE domain FE384_11195 PF00072 Response regulator receiver domain FE384_11195 PF00196 Bacterial regulatory proteins, luxR family FE384_11200 PF03918 Cytochrome C biogenesis protein FE384_11205 PF08534 Redoxin FE384_11210 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FE384_11210 PF01578 Cytochrome C assembly protein FE384_11215 PF03100 CcmE FE384_11220 PF04995 Heme exporter protein D (CcmD) FE384_11225 PF01578 Cytochrome C assembly protein FE384_11230 PF03379 CcmB protein FE384_11235 PF00005 ABC transporter FE384_11240 PF03264 NapC/NirT cytochrome c family, N-terminal region FE384_11245 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FE384_11250 PF12801 4Fe-4S binding domain FE384_11250 PF13237 4Fe-4S dicluster domain FE384_11255 PF12838 4Fe-4S dicluster domain FE384_11255 PF12800 4Fe-4S binding domain FE384_11260 PF00384 Molybdopterin oxidoreductase FE384_11260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE384_11260 PF01568 Molydopterin dinucleotide binding domain FE384_11265 PF03927 NapD protein FE384_11270 PF00037 4Fe-4S binding domain FE384_11270 PF12800 4Fe-4S binding domain FE384_11270 PF13187 4Fe-4S dicluster domain FE384_11275 PF03974 Ecotin FE384_11280 PF06039 Malate:quinone oxidoreductase (Mqo) FE384_11285 PF00005 ABC transporter FE384_11290 PF13532 2OG-Fe(II) oxygenase superfamily FE384_11295 PF02805 Metal binding domain of Ada FE384_11295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FE384_11295 PF12833 Helix-turn-helix domain FE384_11295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FE384_11300 PF02424 ApbE family FE384_11305 PF00267 Gram-negative porin FE384_11310 PF01627 Hpt domain FE384_11310 PF16359 RcsD-ABL domain FE384_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_11315 PF00196 Bacterial regulatory proteins, luxR family FE384_11315 PF00072 Response regulator receiver domain FE384_11320 PF00072 Response regulator receiver domain FE384_11320 PF09456 RcsC Alpha-Beta-Loop (ABL) FE384_11320 PF00512 His Kinase A (phospho-acceptor) domain FE384_11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_11325 PF00512 His Kinase A (phospho-acceptor) domain FE384_11325 PF00989 PAS fold FE384_11330 PF00158 Sigma-54 interaction domain FE384_11330 PF00072 Response regulator receiver domain FE384_11330 PF02954 Bacterial regulatory protein, Fis family FE384_11335 PF01144 Coenzyme A transferase FE384_11340 PF01144 Coenzyme A transferase FE384_11345 PF02667 Short chain fatty acid transporter FE384_11355 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) FE384_11360 PF10062 Predicted secreted protein (DUF2300) FE384_11360 PF08486 Stage II sporulation protein FE384_11370 PF06672 Protein of unknown function (DUF1175) FE384_11375 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) FE384_11380 PF03989 DNA gyrase C-terminal domain, beta-propeller FE384_11380 PF00521 DNA gyrase/topoisomerase IV, subunit A FE384_11390 PF12951 Passenger-associated-transport-repeat FE384_11390 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat FE384_11390 PF03797 Autotransporter beta-domain FE384_11395 PF00317 Ribonucleotide reductase, all-alpha domain FE384_11395 PF02867 Ribonucleotide reductase, barrel domain FE384_11395 PF03477 ATP cone domain FE384_11400 PF00268 Ribonucleotide reductase, small chain FE384_11405 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_11420 PF03009 Glycerophosphoryl diester phosphodiesterase family FE384_11425 PF07690 Major Facilitator Superfamily FE384_11430 PF01266 FAD dependent oxidoreductase FE384_11430 PF04324 BFD-like [2Fe-2S] binding domain FE384_11435 PF00890 FAD binding domain FE384_11440 PF13183 4Fe-4S dicluster domain FE384_11440 PF02754 Cysteine-rich domain FE384_11445 PF04754 Putative transposase, YhgA-like FE384_11455 PF03328 HpcH/HpaI aldolase/citrate lyase family FE384_11460 PF07690 Major Facilitator Superfamily FE384_11465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FE384_11465 PF13378 Enolase C-terminal domain-like FE384_11470 PF01614 Bacterial transcriptional regulator FE384_11470 PF09339 IclR helix-turn-helix domain FE384_11475 PF00994 Probable molybdopterin binding domain FE384_11480 PF07437 YfaZ precursor FE384_11485 PF00293 NUDIX domain FE384_11490 PF00300 Histidine phosphatase superfamily (branch 1) FE384_11495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FE384_11500 PF00535 Glycosyl transferase family 2 FE384_11505 PF01370 NAD dependent epimerase/dehydratase family FE384_11505 PF02911 Formyl transferase, C-terminal domain FE384_11505 PF00551 Formyl transferase FE384_11510 PF01522 Polysaccharide deacetylase FE384_11515 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FE384_11520 PF00892 EamA-like transporter family FE384_11535 PF13193 AMP-binding enzyme C-terminal domain FE384_11535 PF00501 AMP-binding enzyme FE384_11540 PF13378 Enolase C-terminal domain-like FE384_11545 PF00378 Enoyl-CoA hydratase/isomerase FE384_11550 PF12697 Alpha/beta hydrolase family FE384_11555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_11555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE384_11555 PF16582 Middle domain of thiamine pyrophosphate FE384_11560 PF00425 chorismate binding enzyme FE384_11565 PF05957 Bacterial protein of unknown function (DUF883) FE384_11570 PF13673 Acetyltransferase (GNAT) domain FE384_11575 PF12706 Beta-lactamase superfamily domain FE384_11580 PF02902 Ulp1 protease family, C-terminal catalytic domain FE384_11585 PF00092 von Willebrand factor type A domain FE384_11585 PF12034 Domain of unknown function (DUF3520) FE384_11585 PF12450 von Willebrand factor FE384_11590 PF04389 Peptidase family M28 FE384_11595 PF08974 Domain of unknown function (DUF1877) FE384_11615 PF00361 Proton-conducting membrane transporter FE384_11620 PF00361 Proton-conducting membrane transporter FE384_11625 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE384_11625 PF00361 Proton-conducting membrane transporter FE384_11630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FE384_11635 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FE384_11640 PF12838 4Fe-4S dicluster domain FE384_11645 PF00146 NADH dehydrogenase FE384_11650 PF00384 Molybdopterin oxidoreductase FE384_11650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FE384_11650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE384_11650 PF01568 Molydopterin dinucleotide binding domain FE384_11655 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FE384_11655 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FE384_11655 PF10531 SLBB domain FE384_11665 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FE384_11665 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE384_11670 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE384_11675 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FE384_11680 PF03466 LysR substrate binding domain FE384_11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_11685 PF00155 Aminotransferase class I and II FE384_11695 PF02080 TrkA-C domain FE384_11695 PF03600 Citrate transporter FE384_11700 PF13419 Haloacid dehalogenase-like hydrolase FE384_11705 PF03887 YfbU domain FE384_11710 PF04217 Protein of unknown function, DUF412 FE384_11715 PF00871 Acetokinase family FE384_11720 PF01515 Phosphate acetyl/butaryl transferase FE384_11720 PF07085 DRTGG domain FE384_11725 PF03606 C4-dicarboxylate anaerobic carrier FE384_11730 PF00293 NUDIX domain FE384_11735 PF12850 Calcineurin-like phosphoesterase superfamily domain FE384_11740 PF14834 Glutathione S-transferase, C-terminal domain FE384_11740 PF02798 Glutathione S-transferase, N-terminal domain FE384_11750 PF02152 Dihydroneopterin aldolase FE384_11755 PF08338 Domain of unknown function (DUF1731) FE384_11755 PF01370 NAD dependent epimerase/dehydratase family FE384_11760 PF04754 Putative transposase, YhgA-like FE384_11765 PF00005 ABC transporter FE384_11770 PF00528 Binding-protein-dependent transport system inner membrane component FE384_11775 PF00528 Binding-protein-dependent transport system inner membrane component FE384_11780 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_11785 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_11790 PF02441 Flavoprotein FE384_11795 PF00156 Phosphoribosyl transferase domain FE384_11800 PF02674 Colicin V production protein FE384_11805 PF05036 Sporulation related domain FE384_11810 PF08245 Mur ligase middle domain FE384_11810 PF02875 Mur ligase family, glutamate ligase domain FE384_11815 PF17848 Acetyl-coA carboxylase zinc finger domain FE384_11815 PF01039 Carboxyl transferase domain FE384_11820 PF09335 SNARE associated Golgi protein FE384_11825 PF01416 tRNA pseudouridine synthase FE384_11830 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE384_11830 PF02774 Semialdehyde dehydrogenase, dimerisation domain FE384_11835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE384_11835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE384_11835 PF11890 Domain of unknown function (DUF3410) FE384_11845 PF07690 Major Facilitator Superfamily FE384_11850 PF02801 Beta-ketoacyl synthase, C-terminal domain FE384_11850 PF00109 Beta-ketoacyl synthase, N-terminal domain FE384_11855 PF01266 FAD dependent oxidoreductase FE384_11855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FE384_11860 PF08891 YfcL protein FE384_11865 PF04315 Elongation factor P hydroxylase FE384_11870 PF01925 Sulfite exporter TauE/SafE FE384_11875 PF03411 Penicillin-insensitive murein endopeptidase FE384_11880 PF01264 Chorismate synthase FE384_11885 PF05175 Methyltransferase small domain FE384_11890 PF01713 Smr domain FE384_11895 PF11245 Protein of unknown function (DUF2544) FE384_11900 PF00419 Fimbrial protein FE384_11905 PF00419 Fimbrial protein FE384_11910 PF00419 Fimbrial protein FE384_11915 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_11915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_11925 PF00419 Fimbrial protein FE384_11930 PF00300 Histidine phosphatase superfamily (branch 1) FE384_11935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE384_11935 PF00378 Enoyl-CoA hydratase/isomerase FE384_11935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE384_11940 PF02803 Thiolase, C-terminal domain FE384_11940 PF00108 Thiolase, N-terminal domain FE384_11945 PF04175 Protein of unknown function (DUF406) FE384_11950 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FE384_11960 PF04333 MlaA lipoprotein FE384_11965 PF01226 Formate/nitrite transporter FE384_11975 PF14659 Phage integrase, N-terminal SAM-like domain FE384_11975 PF13356 Arm DNA-binding domain FE384_11975 PF00589 Phage integrase family FE384_11980 PF04138 GtrA-like protein FE384_11985 PF00535 Glycosyl transferase family 2 FE384_12005 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FE384_12015 PF05869 DNA N-6-adenine-methyltransferase (Dam) FE384_12020 PF06069 PerC transcriptional activator FE384_12035 PF10065 Uncharacterized conserved protein (DUF2303) FE384_12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_12060 PF03466 LysR substrate binding domain FE384_12065 PF02447 GntP family permease FE384_12070 PF00291 Pyridoxal-phosphate dependent enzyme FE384_12075 PF07690 Major Facilitator Superfamily FE384_12080 PF00529 HlyD membrane-fusion protein of T1SS FE384_12080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_12085 PF00196 Bacterial regulatory proteins, luxR family FE384_12085 PF00072 Response regulator receiver domain FE384_12090 PF00512 His Kinase A (phospho-acceptor) domain FE384_12090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_12090 PF00072 Response regulator receiver domain FE384_12090 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_12090 PF01627 Hpt domain FE384_12095 PF02515 CoA-transferase family III FE384_12100 PF03547 Membrane transport protein FE384_12105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE384_12105 PF00205 Thiamine pyrophosphate enzyme, central domain FE384_12105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_12110 PF02515 CoA-transferase family III FE384_12115 PF10938 YfdX protein FE384_12125 PF10810 Protein of unknown function (DUF2545) FE384_12130 PF03279 Bacterial lipid A biosynthesis acyltransferase FE384_12140 PF00155 Aminotransferase class I and II FE384_12145 PF06580 Histidine kinase FE384_12145 PF07694 5TMR of 5TMR-LYT FE384_12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_12150 PF00072 Response regulator receiver domain FE384_12150 PF04397 LytTr DNA-binding domain FE384_12155 PF12833 Helix-turn-helix domain FE384_12160 PF05524 PEP-utilising enzyme, N-terminal FE384_12160 PF00381 PTS HPr component phosphorylation site FE384_12160 PF02896 PEP-utilising enzyme, TIM barrel domain FE384_12160 PF00391 PEP-utilising enzyme, mobile domain FE384_12160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_12165 PF05343 M42 glutamyl aminopeptidase FE384_12170 PF00557 Metallopeptidase family M24 FE384_12170 PF01321 Creatinase/Prolidase N-terminal domain FE384_12175 PF02378 Phosphotransferase system, EIIC FE384_12180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_12185 PF02685 Glucokinase FE384_12190 PF00654 Voltage gated chloride channel FE384_12195 PF10697 Protein of unknown function (DUF2502) FE384_12200 PF01566 Natural resistance-associated macrophage protein FE384_12205 PF01773 Na+ dependent nucleoside transporter N-terminus FE384_12205 PF07670 Nucleoside recognition FE384_12205 PF07662 Na+ dependent nucleoside transporter C-terminus FE384_12210 PF01609 Transposase DDE domain FE384_12215 PF05231 MASE1 FE384_12215 PF00563 EAL domain FE384_12230 PF07037 Putative transcription regulator (DUF1323) FE384_12235 PF07037 Putative transcription regulator (DUF1323) FE384_12240 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE384_12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_12270 PF03466 LysR substrate binding domain FE384_12280 PF03825 Nucleoside H+ symporter FE384_12285 PF01048 Phosphorylase superfamily FE384_12290 PF03502 Nucleoside-specific channel-forming protein, Tsx FE384_12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_12295 PF03466 LysR substrate binding domain FE384_12300 PF13593 SBF-like CPA transporter family (DUF4137) FE384_12305 PF12843 Putative quorum-sensing-regulated virulence factor FE384_12310 PF00533 BRCA1 C Terminus (BRCT) domain FE384_12310 PF01653 NAD-dependent DNA ligase adenylation domain FE384_12310 PF03120 NAD-dependent DNA ligase OB-fold domain FE384_12310 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FE384_12310 PF12826 Helix-hairpin-helix motif FE384_12315 PF04354 ZipA, C-terminal FtsZ-binding domain FE384_12325 PF00291 Pyridoxal-phosphate dependent enzyme FE384_12330 PF00381 PTS HPr component phosphorylation site FE384_12335 PF00391 PEP-utilising enzyme, mobile domain FE384_12335 PF02896 PEP-utilising enzyme, TIM barrel domain FE384_12335 PF05524 PEP-utilising enzyme, N-terminal FE384_12340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FE384_12345 PF08543 Phosphomethylpyrimidine kinase FE384_12350 PF17263 Family of unknown function (DUF5329) FE384_12355 PF05406 WGR domain FE384_12360 PF00291 Pyridoxal-phosphate dependent enzyme FE384_12365 PF00005 ABC transporter FE384_12370 PF00528 Binding-protein-dependent transport system inner membrane component FE384_12375 PF00528 Binding-protein-dependent transport system inner membrane component FE384_12390 PF01418 Helix-turn-helix domain, rpiR family FE384_12390 PF01380 SIS domain FE384_12395 PF01380 SIS domain FE384_12400 PF02378 Phosphotransferase system, EIIC FE384_12400 PF00367 phosphotransferase system, EIIB FE384_12405 PF00144 Beta-lactamase FE384_12410 PF04261 Dyp-type peroxidase family FE384_12415 PF06572 Protein of unknown function (DUF1131) FE384_12420 PF11143 Protein of unknown function (DUF2919) FE384_12425 PF00583 Acetyltransferase (GNAT) family FE384_12430 PF01520 N-acetylmuramoyl-L-alanine amidase FE384_12435 PF01218 Coproporphyrinogen III oxidase FE384_12440 PF12833 Helix-turn-helix domain FE384_12445 PF00936 BMC domain FE384_12445 PF16365 Ethanolamine utilization protein EutK C-terminus FE384_12450 PF00936 BMC domain FE384_12455 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FE384_12460 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FE384_12465 PF06277 Ethanolamine utilisation protein EutA FE384_12470 PF04346 Ethanolamine utilisation protein, EutH FE384_12475 PF00465 Iron-containing alcohol dehydrogenase FE384_12485 PF00171 Aldehyde dehydrogenase family FE384_12490 PF03319 Ethanolamine utilisation protein EutN/carboxysome FE384_12495 PF00936 BMC domain FE384_12500 PF01515 Phosphate acetyl/butaryl transferase FE384_12505 PF01923 Cobalamin adenosyltransferase FE384_12510 PF06249 Ethanolamine utilisation protein EutQ FE384_12515 PF10662 Ethanolamine utilisation - propanediol utilisation FE384_12520 PF00936 BMC domain FE384_12525 PF03949 Malic enzyme, NAD binding domain FE384_12525 PF01515 Phosphate acetyl/butaryl transferase FE384_12525 PF00390 Malic enzyme, N-terminal domain FE384_12530 PF00923 Transaldolase/Fructose-6-phosphate aldolase FE384_12535 PF02780 Transketolase, C-terminal domain FE384_12535 PF00456 Transketolase, thiamine diphosphate binding domain FE384_12535 PF02779 Transketolase, pyrimidine binding domain FE384_12540 PF06674 Protein of unknown function (DUF1176) FE384_12545 PF00293 NUDIX domain FE384_12550 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_12550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE384_12550 PF13247 4Fe-4S dicluster domain FE384_12555 PF00672 HAMP domain FE384_12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_12555 PF07730 Histidine kinase FE384_12555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FE384_12560 PF00873 AcrB/AcrD/AcrF family FE384_12570 PF03960 ArsC family FE384_12575 PF01546 Peptidase family M20/M25/M40 FE384_12575 PF07687 Peptidase dimerisation domain FE384_12580 PF13980 Uncharacterised protein family (UPF0370) FE384_12585 PF02230 Phospholipase/Carboxylesterase FE384_12590 PF13718 GNAT acetyltransferase 2 FE384_12590 PF17176 tRNA-binding domain FE384_12590 PF08351 Domain of unknown function (DUF1726) FE384_12590 PF05127 Helicase FE384_12595 PF04228 Putative neutral zinc metallopeptidase FE384_12600 PF01259 SAICAR synthetase FE384_12605 PF06804 NlpB/DapX lipoprotein FE384_12610 PF00701 Dihydrodipicolinate synthetase family FE384_12615 PF01842 ACT domain FE384_12620 PF00578 AhpC/TSA family FE384_12625 PF12798 4Fe-4S binding domain FE384_12625 PF00037 4Fe-4S binding domain FE384_12630 PF00361 Proton-conducting membrane transporter FE384_12635 PF00146 NADH dehydrogenase FE384_12640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE384_12640 PF00361 Proton-conducting membrane transporter FE384_12645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FE384_12650 PF00361 Proton-conducting membrane transporter FE384_12650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE384_12655 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FE384_12655 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE384_12655 PF00374 Nickel-dependent hydrogenase FE384_12660 PF12838 4Fe-4S dicluster domain FE384_12665 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE384_12670 PF07450 Formate hydrogenlyase maturation protein HycH FE384_12675 PF01590 GAF domain FE384_12675 PF00158 Sigma-54 interaction domain FE384_12680 PF01226 Formate/nitrite transporter FE384_12685 PF01594 AI-2E family transporter FE384_12690 PF01435 Peptidase family M48 FE384_12695 PF03960 ArsC family FE384_12700 PF00308 Bacterial dnaA protein FE384_12705 PF00860 Permease family FE384_12715 PF02769 AIR synthase related protein, C-terminal domain FE384_12715 PF00586 AIR synthase related protein, N-terminal domain FE384_12720 PF00551 Formyl transferase FE384_12725 PF13090 Polyphosphate kinase C-terminal domain 2 FE384_12725 PF17941 Polyphosphate kinase C-terminal domain 1 FE384_12725 PF13089 Polyphosphate kinase N-terminal domain FE384_12725 PF02503 Polyphosphate kinase middle domain FE384_12730 PF02541 Ppx/GppA phosphatase family FE384_12735 PF00563 EAL domain FE384_12735 PF05231 MASE1 FE384_12740 PF11119 Protein of unknown function (DUF2633) FE384_12745 PF05433 Glycine zipper 2TM domain FE384_12750 PF17358 Family of unknown function (DUF5384) FE384_12755 PF00117 Glutamine amidotransferase class-I FE384_12755 PF00958 GMP synthase C terminal domain FE384_12755 PF02540 NAD synthase FE384_12760 PF00571 CBS domain FE384_12760 PF00478 IMP dehydrogenase / GMP reductase domain FE384_12765 PF13742 OB-fold nucleic acid binding domain FE384_12765 PF02601 Exonuclease VII, large subunit FE384_12770 PF07191 zinc-ribbons FE384_12775 PF01926 50S ribosome-binding GTPase FE384_12775 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FE384_12780 PF13360 PQQ-like domain FE384_12785 PF09976 Tetratricopeptide repeat-like domain FE384_12790 PF13393 Histidyl-tRNA synthetase FE384_12790 PF03129 Anticodon binding domain FE384_12795 PF04551 GcpE protein FE384_12800 PF13464 Domain of unknown function (DUF4115) FE384_12805 PF04055 Radical SAM superfamily FE384_12810 PF00334 Nucleoside diphosphate kinase FE384_12815 PF06832 Penicillin-Binding Protein C-terminus Family FE384_12815 PF00905 Penicillin binding protein transpeptidase domain FE384_12815 PF00912 Transglycosylase FE384_12820 PF01835 MG2 domain FE384_12820 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FE384_12820 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FE384_12820 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FE384_12820 PF00207 Alpha-2-macroglobulin family FE384_12820 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FE384_12820 PF07703 Alpha-2-macroglobulin bait region domain FE384_12820 PF17962 Bacterial macroglobulin domain 6 FE384_12820 PF07678 A-macroglobulin TED domain FE384_12825 PF00581 Rhodanese-like domain FE384_12830 PF14581 SseB protein C-terminal domain FE384_12830 PF07179 SseB protein N-terminal domain FE384_12835 PF12404 Peptidase FE384_12835 PF00883 Cytosol aminopeptidase family, catalytic domain FE384_12840 PF04384 Iron-sulphur cluster assembly FE384_12845 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_12850 PF00012 Hsp70 protein FE384_12855 PF07743 HSCB C-terminal oligomerisation domain FE384_12860 PF01521 Iron-sulphur cluster biosynthesis FE384_12865 PF01592 NifU-like N terminal domain FE384_12870 PF00266 Aminotransferase class-V FE384_12875 PF02082 Transcriptional regulator FE384_12880 PF00588 SpoU rRNA Methylase family FE384_12885 PF00459 Inositol monophosphatase family FE384_12890 PF12146 Serine aminopeptidase, S33 FE384_12900 PF12832 MFS_1 like family FE384_12905 PF03466 LysR substrate binding domain FE384_12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_12910 PF00355 Rieske [2Fe-2S] domain FE384_12910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FE384_12915 PF00866 Ring hydroxylating beta subunit FE384_12920 PF00355 Rieske [2Fe-2S] domain FE384_12925 PF00106 short chain dehydrogenase FE384_12930 PF14759 Reductase C-terminal FE384_12930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_12935 PF07681 DoxX FE384_12940 PF01263 Aldose 1-epimerase FE384_12945 PF08240 Alcohol dehydrogenase GroES-like domain FE384_12945 PF00107 Zinc-binding dehydrogenase FE384_12950 PF02653 Branched-chain amino acid transport system / permease component FE384_12955 PF00005 ABC transporter FE384_12960 PF13407 Periplasmic binding protein domain FE384_12965 PF13181 Tetratricopeptide repeat FE384_12965 PF17128 Domain of unknown function (DUF5107) FE384_12970 PF00480 ROK family FE384_12975 PF00464 Serine hydroxymethyltransferase FE384_12980 PF00175 Oxidoreductase NAD-binding domain FE384_12980 PF00042 Globin FE384_12980 PF00970 Oxidoreductase FAD-binding domain FE384_12985 PF00543 Nitrogen regulatory protein P-II FE384_12990 PF00158 Sigma-54 interaction domain FE384_12990 PF00072 Response regulator receiver domain FE384_12995 PF13942 YfhG lipoprotein FE384_13000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_13000 PF00512 His Kinase A (phospho-acceptor) domain FE384_13005 PF02769 AIR synthase related protein, C-terminal domain FE384_13005 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FE384_13005 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FE384_13010 PF01464 Transglycosylase SLT domain FE384_13010 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE384_13015 PF14437 MafB19-like deaminase FE384_13025 PF01418 Helix-turn-helix domain, rpiR family FE384_13025 PF01380 SIS domain FE384_13030 PF12838 4Fe-4S dicluster domain FE384_13040 PF01648 4'-phosphopantetheinyl transferase superfamily FE384_13045 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FE384_13050 PF11967 Recombination protein O N terminal FE384_13050 PF02565 Recombination protein O C terminal FE384_13055 PF07650 KH domain FE384_13055 PF01926 50S ribosome-binding GTPase FE384_13060 PF14622 Ribonuclease-III-like FE384_13060 PF00035 Double-stranded RNA binding motif FE384_13065 PF10502 Signal peptidase, peptidase S26 FE384_13070 PF00679 Elongation factor G C-terminus FE384_13070 PF00009 Elongation factor Tu GTP binding domain FE384_13070 PF03144 Elongation factor Tu domain 2 FE384_13070 PF06421 GTP-binding protein LepA C-terminus FE384_13080 PF03888 MucB/RseB N-terminal domain FE384_13080 PF17188 MucB/RseB C-terminal domain FE384_13085 PF03873 Anti sigma-E protein RseA, C-terminal domain FE384_13085 PF03872 Anti sigma-E protein RseA, N-terminal domain FE384_13090 PF04542 Sigma-70 region 2 FE384_13090 PF08281 Sigma-70, region 4 FE384_13100 PF02910 Fumarate reductase flavoprotein C-term FE384_13100 PF00890 FAD binding domain FE384_13105 PF05175 Methyltransferase small domain FE384_13110 PF00270 DEAD/DEAH box helicase FE384_13110 PF00271 Helicase conserved C-terminal domain FE384_13115 PF03466 LysR substrate binding domain FE384_13115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_13120 PF01810 LysE type translocator FE384_13125 PF01228 Glycine radical FE384_13130 PF03167 Uracil DNA glycosylase superfamily FE384_13135 PF00588 SpoU rRNA Methylase family FE384_13135 PF08032 RNA 2'-O ribose methyltransferase substrate binding FE384_13140 PF00085 Thioredoxin FE384_13150 PF00583 Acetyltransferase (GNAT) family FE384_13150 PF13380 CoA binding domain FE384_13150 PF13607 Succinyl-CoA ligase like flavodoxin domain FE384_13155 PF13091 PLD-like domain FE384_13160 PF10043 Predicted periplasmic lipoprotein (DUF2279) FE384_13165 PF00083 Sugar (and other) transporter FE384_13190 PF07724 AAA domain (Cdc48 subfamily) FE384_13190 PF17871 AAA lid domain FE384_13190 PF10431 C-terminal, D2-small domain, of ClpB protein FE384_13190 PF02861 Clp amino terminal domain, pathogenicity island component FE384_13190 PF00004 ATPase family associated with various cellular activities (AAA) FE384_13200 PF00849 RNA pseudouridylate synthase FE384_13200 PF01479 S4 domain FE384_13205 PF13525 Outer membrane lipoprotein FE384_13210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FE384_13220 PF01817 Chorismate mutase type II FE384_13220 PF00800 Prephenate dehydratase FE384_13225 PF01817 Chorismate mutase type II FE384_13225 PF02153 Prephenate dehydrogenase FE384_13230 PF00793 DAHP synthetase I family FE384_13235 PF10973 Protein of unknown function (DUF2799) FE384_13240 PF13689 YfiR/HmsC-like FE384_13245 PF00990 Diguanylate cyclase, GGDEF domain FE384_13245 PF17152 Periplasmic sensor domain FE384_13250 PF00691 OmpA family FE384_13255 PF01245 Ribosomal protein L19 FE384_13260 PF01746 tRNA (Guanine-1)-methyltransferase FE384_13265 PF05239 PRC-barrel domain FE384_13265 PF01782 RimM N-terminal domain FE384_13270 PF00886 Ribosomal protein S16 FE384_13275 PF02978 Signal peptide binding domain FE384_13275 PF02881 SRP54-type protein, helical bundle domain FE384_13275 PF00448 SRP54-type protein, GTPase domain FE384_13280 PF01578 Cytochrome C assembly protein FE384_13285 PF00571 CBS domain FE384_13285 PF01595 Cyclin M transmembrane N-terminal domain FE384_13285 PF03471 Transporter associated domain FE384_13290 PF01025 GrpE FE384_13295 PF01513 ATP-NAD kinase FE384_13300 PF02463 RecF/RecN/SMC N terminal domain FE384_13305 PF04355 SmpA / OmlA family FE384_13310 PF03658 RnfH family Ubiquitin FE384_13315 PF03364 Polyketide cyclase / dehydrase and lipid transport FE384_13320 PF01668 SmpB protein FE384_13330 PF13356 Arm DNA-binding domain FE384_13330 PF00589 Phage integrase family FE384_13340 PF05930 Prophage CP4-57 regulatory protein (AlpA) FE384_13345 PF13148 Protein of unknown function (DUF3987) FE384_13355 PF00271 Helicase conserved C-terminal domain FE384_13360 PF14130 Domain of unknown function (DUF4297) FE384_13360 PF08878 Domain of unknown function (DUF1837) FE384_13365 PF07510 Protein of unknown function (DUF1524) FE384_13370 PF15935 RNase LS, bacterial toxin FE384_13375 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA FE384_13380 PF01926 50S ribosome-binding GTPase FE384_13385 PF06067 Domain of unknown function (DUF932) FE384_13390 PF08220 DeoR-like helix-turn-helix domain FE384_13390 PF13280 WYL domain FE384_13430 PF03230 Antirestriction protein FE384_13435 PF04002 RadC-like JAB domain FE384_13440 PF06174 Protein of unknown function (DUF987) FE384_13445 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FE384_13450 PF06755 CbtA_toxin of type IV toxin-antitoxin system FE384_13455 PF16168 Adhesin of bacterial autotransporter system, probable stalk FE384_13455 PF03797 Autotransporter beta-domain FE384_13455 PF03212 Pertactin FE384_13490 PF08943 CsiD FE384_13495 PF01266 FAD dependent oxidoreductase FE384_13500 PF00171 Aldehyde dehydrogenase family FE384_13505 PF00202 Aminotransferase class-III FE384_13510 PF00324 Amino acid permease FE384_13515 PF07729 FCD domain FE384_13515 PF00392 Bacterial regulatory proteins, gntR family FE384_13520 PF01476 LysM domain FE384_13520 PF04972 BON domain FE384_13525 PF01679 Proteolipid membrane potential modulator FE384_13530 PF01022 Bacterial regulatory protein, arsR family FE384_13535 PF11127 Protein of unknown function (DUF2892) FE384_13535 PF00581 Rhodanese-like domain FE384_13540 PF00816 H-NS histone family FE384_13545 PF06610 L-alanine exporter FE384_13550 PF09400 Protein of unknown function (DUF2002) FE384_13555 PF05957 Bacterial protein of unknown function (DUF883) FE384_13560 PF00462 Glutaredoxin FE384_13565 PF07972 NrdI Flavodoxin like FE384_13570 PF08343 Ribonucleotide reductase N-terminal FE384_13570 PF00317 Ribonucleotide reductase, all-alpha domain FE384_13570 PF02867 Ribonucleotide reductase, barrel domain FE384_13575 PF00268 Ribonucleotide reductase, small chain FE384_13580 PF00571 CBS domain FE384_13580 PF00005 ABC transporter FE384_13585 PF00528 Binding-protein-dependent transport system inner membrane component FE384_13590 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FE384_13600 PF03591 AzlC protein FE384_13605 PF05437 Branched-chain amino acid transport protein (AzlD) FE384_13610 PF01047 MarR family FE384_13615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_13615 PF00529 HlyD membrane-fusion protein of T1SS FE384_13620 PF07690 Major Facilitator Superfamily FE384_13625 PF02664 S-Ribosylhomocysteinase (LuxS) FE384_13630 PF04262 Glutamate-cysteine ligase FE384_13635 PF09335 SNARE associated Golgi protein FE384_13640 PF13419 Haloacid dehalogenase-like hydrolase FE384_13670 PF02599 Global regulator protein family FE384_13675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FE384_13675 PF01411 tRNA synthetases class II (A) FE384_13675 PF02272 DHHA1 domain FE384_13680 PF02631 RecX family FE384_13685 PF00154 recA bacterial DNA recombination protein FE384_13690 PF02464 Competence-damaged protein FE384_13695 PF13406 Transglycosylase SLT domain FE384_13700 PF03608 PTS system enzyme II sorbitol-specific factor FE384_13710 PF03829 PTS system glucitol/sorbitol-specific IIA component FE384_13715 PF00106 short chain dehydrogenase FE384_13720 PF06923 Glucitol operon activator protein (GutM) FE384_13725 PF00455 DeoR C terminal sensor domain FE384_13725 PF08220 DeoR-like helix-turn-helix domain FE384_13730 PF00571 CBS domain FE384_13730 PF01380 SIS domain FE384_13735 PF00158 Sigma-54 interaction domain FE384_13735 PF01590 GAF domain FE384_13740 PF00753 Metallo-beta-lactamase superfamily FE384_13740 PF00258 Flavodoxin FE384_13740 PF00301 Rubredoxin FE384_13745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_13745 PF18113 Rubredoxin binding C-terminal domain FE384_13750 PF17788 HypF Kae1-like domain FE384_13750 PF07503 HypF finger FE384_13750 PF01300 Telomere recombination FE384_13750 PF00708 Acylphosphatase FE384_13755 PF12800 4Fe-4S binding domain FE384_13755 PF13247 4Fe-4S dicluster domain FE384_13760 PF00356 Bacterial regulatory proteins, lacI family FE384_13765 PF02378 Phosphotransferase system, EIIC FE384_13765 PF00367 phosphotransferase system, EIIB FE384_13770 PF00232 Glycosyl hydrolase family 1 FE384_13775 PF01750 Hydrogenase maturation protease FE384_13780 PF07450 Formate hydrogenlyase maturation protein HycH FE384_13785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE384_13790 PF12838 4Fe-4S dicluster domain FE384_13795 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FE384_13795 PF00374 Nickel-dependent hydrogenase FE384_13795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE384_13800 PF00146 NADH dehydrogenase FE384_13805 PF00361 Proton-conducting membrane transporter FE384_13810 PF13247 4Fe-4S dicluster domain FE384_13815 PF11046 Transcriptional repressor of hyc and hyp operons FE384_13825 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FE384_13830 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE384_13835 PF01455 HupF/HypC family FE384_13840 PF01924 Hydrogenase formation hypA family FE384_13845 PF02769 AIR synthase related protein, C-terminal domain FE384_13845 PF00586 AIR synthase related protein, N-terminal domain FE384_13850 PF01590 GAF domain FE384_13850 PF00158 Sigma-54 interaction domain FE384_13855 PF11756 Nitrous oxide-stimulated promoter FE384_13860 PF05190 MutS family domain IV FE384_13860 PF05192 MutS domain III FE384_13860 PF00488 MutS domain V FE384_13860 PF01624 MutS domain I FE384_13860 PF05188 MutS domain II FE384_13865 PF00149 Calcineurin-like phosphoesterase FE384_13870 PF08220 DeoR-like helix-turn-helix domain FE384_13870 PF00455 DeoR C terminal sensor domain FE384_13875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE384_13875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE384_13880 PF07005 Sugar-binding N-terminal domain FE384_13880 PF17042 Nucleotide-binding C-terminal domain FE384_13885 PF00596 Class II Aldolase and Adducin N-terminal domain FE384_13890 PF01261 Xylose isomerase-like TIM barrel FE384_13895 PF02447 GntP family permease FE384_13905 PF01476 LysM domain FE384_13905 PF01551 Peptidase family M23 FE384_13915 PF01975 Survival protein SurE FE384_13920 PF01142 tRNA pseudouridine synthase D (TruD) FE384_13925 PF02542 YgbB family FE384_13930 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FE384_13935 PF04977 Septum formation initiator FE384_13940 PF12084 Protein of unknown function (DUF3561) FE384_13950 PF00009 Elongation factor Tu GTP binding domain FE384_13955 PF01507 Phosphoadenosine phosphosulfate reductase family FE384_13960 PF04389 Peptidase family M28 FE384_13965 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) FE384_13970 PF01867 CRISPR associated protein Cas1 FE384_13975 PF08798 CRISPR associated protein FE384_13980 PF09704 CRISPR-associated protein (Cas_Cas5) FE384_13985 PF09344 CT1975-like protein FE384_13990 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) FE384_13995 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) FE384_14000 PF00271 Helicase conserved C-terminal domain FE384_14000 PF18019 HD domain FE384_14000 PF00270 DEAD/DEAH box helicase FE384_14010 PF01507 Phosphoadenosine phosphosulfate reductase family FE384_14015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FE384_14015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FE384_14020 PF00175 Oxidoreductase NAD-binding domain FE384_14020 PF00258 Flavodoxin FE384_14020 PF00667 FAD binding domain FE384_14025 PF01242 6-pyruvoyl tetrahydropterin synthase FE384_14030 PF01266 FAD dependent oxidoreductase FE384_14040 PF04309 Glycerol-3-phosphate responsive antiterminator FE384_14045 PF00766 Electron transfer flavoprotein FAD-binding domain FE384_14045 PF01012 Electron transfer flavoprotein domain FE384_14050 PF01012 Electron transfer flavoprotein domain FE384_14055 PF00083 Sugar (and other) transporter FE384_14060 PF01565 FAD binding domain FE384_14060 PF02913 FAD linked oxidases, C-terminal domain FE384_14070 PF07690 Major Facilitator Superfamily FE384_14075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_14075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE384_14080 PF04055 Radical SAM superfamily FE384_14090 PF04536 TPM domain FE384_14095 PF03952 Enolase, N-terminal domain FE384_14095 PF00113 Enolase, C-terminal TIM barrel domain FE384_14100 PF06418 CTP synthase N-terminus FE384_14100 PF00117 Glutamine amidotransferase class-I FE384_14105 PF03819 MazG nucleotide pyrophosphohydrolase domain FE384_14110 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FE384_14115 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FE384_14120 PF13291 ACT domain FE384_14120 PF04607 Region found in RelA / SpoT proteins FE384_14120 PF02824 TGS domain FE384_14125 PF05958 tRNA (Uracil-5-)-methyltransferase FE384_14125 PF01938 TRAM domain FE384_14130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_14130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FE384_14130 PF01627 Hpt domain FE384_14130 PF00512 His Kinase A (phospho-acceptor) domain FE384_14130 PF00072 Response regulator receiver domain FE384_14130 PF00672 HAMP domain FE384_14135 PF13378 Enolase C-terminal domain-like FE384_14140 PF13378 Enolase C-terminal domain-like FE384_14140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FE384_14145 PF07690 Major Facilitator Superfamily FE384_14150 PF00258 Flavodoxin FE384_14155 PF00849 RNA pseudouridylate synthase FE384_14160 PF04287 tRNA pseudouridine synthase C FE384_14165 PF07348 Syd protein (SUKH-2) FE384_14170 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FE384_14170 PF14489 QueF-like protein FE384_14175 PF03641 Possible lysine decarboxylase FE384_14175 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FE384_14175 PF11892 Domain of unknown function (DUF3412) FE384_14185 PF03315 Serine dehydratase beta chain FE384_14185 PF03313 Serine dehydratase alpha chain FE384_14190 PF01367 5'-3' exonuclease, C-terminal SAM fold FE384_14190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FE384_14195 PF00465 Iron-containing alcohol dehydrogenase FE384_14200 PF00596 Class II Aldolase and Adducin N-terminal domain FE384_14210 PF07881 L-fucose isomerase, first N-terminal domain FE384_14210 PF02952 L-fucose isomerase, C-terminal domain FE384_14210 PF07882 L-fucose isomerase, second N-terminal domain FE384_14215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE384_14215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_14220 PF05025 RbsD / FucU transport protein family FE384_14225 PF08220 DeoR-like helix-turn-helix domain FE384_14225 PF00455 DeoR C terminal sensor domain FE384_14230 PF18125 RlmM ferredoxin-like domain FE384_14230 PF01728 FtsJ-like methyltransferase FE384_14235 PF04241 Protein of unknown function (DUF423) FE384_14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_14240 PF03466 LysR substrate binding domain FE384_14245 PF06004 Bacterial protein of unknown function (DUF903) FE384_14250 PF00266 Aminotransferase class-V FE384_14255 PF02657 Fe-S metabolism associated domain FE384_14260 PF00899 ThiF family FE384_14265 PF03562 MltA specific insert domain FE384_14265 PF06725 3D domain FE384_14285 PF11741 AMIN domain FE384_14285 PF01520 N-acetylmuramoyl-L-alanine amidase FE384_14290 PF00583 Acetyltransferase (GNAT) family FE384_14290 PF00696 Amino acid kinase family FE384_14295 PF13538 UvrD-like helicase C-terminal domain FE384_14300 PF12705 PD-(D/E)XK nuclease superfamily FE384_14300 PF00580 UvrD/REP helicase N-terminal domain FE384_14300 PF13361 UvrD-like helicase C-terminal domain FE384_14305 PF16187 Middle or third domain of peptidase_M16 FE384_14305 PF00675 Insulinase (Peptidase family M16) FE384_14305 PF05193 Peptidase M16 inactive domain FE384_14310 PF17946 RecC C-terminal domain FE384_14315 PF07963 Prokaryotic N-terminal methylation motif FE384_14315 PF12528 Type II secretion prepilin peptidase dependent protein C FE384_14320 PF10713 Protein of unknown function (DUF2509) FE384_14325 PF07963 Prokaryotic N-terminal methylation motif FE384_14330 PF07963 Prokaryotic N-terminal methylation motif FE384_14335 PF00303 Thymidylate synthase FE384_14340 PF01790 Prolipoprotein diacylglyceryl transferase FE384_14345 PF02896 PEP-utilising enzyme, TIM barrel domain FE384_14345 PF00391 PEP-utilising enzyme, mobile domain FE384_14345 PF05524 PEP-utilising enzyme, N-terminal FE384_14345 PF01590 GAF domain FE384_14350 PF00293 NUDIX domain FE384_14360 PF02976 DNA mismatch repair enzyme MutH FE384_14365 PF03741 Integral membrane protein TerC family FE384_14370 PF06004 Bacterial protein of unknown function (DUF903) FE384_14375 PF00248 Aldo/keto reductase family FE384_14380 PF07690 Major Facilitator Superfamily FE384_14385 PF01553 Acyltransferase FE384_14385 PF00501 AMP-binding enzyme FE384_14395 PF00356 Bacterial regulatory proteins, lacI family FE384_14400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FE384_14400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FE384_14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_14405 PF03466 LysR substrate binding domain FE384_14410 PF01177 Asp/Glu/Hydantoin racemase FE384_14415 PF00083 Sugar (and other) transporter FE384_14425 PF04962 KduI/IolB family FE384_14430 PF00108 Thiolase, N-terminal domain FE384_14430 PF02803 Thiolase, C-terminal domain FE384_14435 PF03222 Tryptophan/tyrosine permease family FE384_14440 PF00196 Bacterial regulatory proteins, luxR family FE384_14445 PF00486 Transcriptional regulatory protein, C terminal FE384_14470 PF07720 Tetratricopeptide repeat FE384_14475 PF00486 Transcriptional regulatory protein, C terminal FE384_14485 PF01464 Transglycosylase SLT domain FE384_14525 PF01476 LysM domain FE384_14525 PF01551 Peptidase family M23 FE384_14530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE384_14530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE384_14535 PF03450 CO dehydrogenase flavoprotein C-terminal domain FE384_14535 PF00941 FAD binding domain in molybdopterin dehydrogenase FE384_14540 PF00111 2Fe-2S iron-sulfur cluster binding domain FE384_14540 PF01799 [2Fe-2S] binding domain FE384_14550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE384_14550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE384_14555 PF00291 Pyridoxal-phosphate dependent enzyme FE384_14560 PF01546 Peptidase family M20/M25/M40 FE384_14560 PF07687 Peptidase dimerisation domain FE384_14565 PF01979 Amidohydrolase family FE384_14570 PF00696 Amino acid kinase family FE384_14575 PF02625 XdhC and CoxI family FE384_14575 PF13478 XdhC Rossmann domain FE384_14585 PF12804 MobA-like NTP transferase domain FE384_14590 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_14590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE384_14595 PF01979 Amidohydrolase family FE384_14600 PF00941 FAD binding domain in molybdopterin dehydrogenase FE384_14605 PF01799 [2Fe-2S] binding domain FE384_14605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE384_14605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE384_14610 PF00860 Permease family FE384_14615 PF01979 Amidohydrolase family FE384_14620 PF00860 Permease family FE384_14625 PF13247 4Fe-4S dicluster domain FE384_14635 PF00860 Permease family FE384_14650 PF00293 NUDIX domain FE384_14655 PF00152 tRNA synthetases class II (D, K and N) FE384_14655 PF01336 OB-fold nucleic acid binding domain FE384_14665 PF17768 RecJ OB domain FE384_14665 PF02272 DHHA1 domain FE384_14665 PF01368 DHH family FE384_14670 PF10411 Disulfide bond isomerase protein N-terminus FE384_14670 PF13098 Thioredoxin-like domain FE384_14675 PF00589 Phage integrase family FE384_14675 PF02899 Phage integrase, N-terminal SAM-like domain FE384_14680 PF00258 Flavodoxin FE384_14685 PF07254 Membrane-bound toxin component of toxin-antitoxin system FE384_14690 PF03937 Flavinator of succinate dehydrogenase FE384_14695 PF01571 Aminomethyltransferase folate-binding domain FE384_14700 PF03006 Haemolysin-III related FE384_14710 PF00232 Glycosyl hydrolase family 1 FE384_14720 PF02347 Glycine cleavage system P-protein FE384_14725 PF01597 Glycine cleavage H-protein FE384_14730 PF01571 Aminomethyltransferase folate-binding domain FE384_14730 PF08669 Glycine cleavage T-protein C-terminal barrel domain FE384_14740 PF01494 FAD binding domain FE384_14745 PF01494 FAD binding domain FE384_14750 PF05195 Aminopeptidase P, N-terminal domain FE384_14750 PF00557 Metallopeptidase family M24 FE384_14755 PF03695 Uncharacterised protein family (UPF0149) FE384_14760 PF05164 Cell division protein ZapA FE384_14770 PF01812 5-formyltetrahydrofolate cyclo-ligase family FE384_14780 PF01842 ACT domain FE384_14780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE384_14780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE384_14785 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FE384_14790 PF03466 LysR substrate binding domain FE384_14795 PF03466 LysR substrate binding domain FE384_14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_14800 PF01642 Methylmalonyl-CoA mutase FE384_14800 PF02310 B12 binding domain FE384_14810 PF00378 Enoyl-CoA hydratase/isomerase FE384_14815 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FE384_14815 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FE384_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_14820 PF03466 LysR substrate binding domain FE384_14825 PF04402 Protein of unknown function (DUF541) FE384_14830 PF01810 LysE type translocator FE384_14835 PF05552 Conserved TM helix FE384_14835 PF00924 Mechanosensitive ion channel FE384_14840 PF01116 Fructose-bisphosphate aldolase class-II FE384_14845 PF00162 Phosphoglycerate kinase FE384_14850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FE384_14850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FE384_14860 PF05068 Mannitol repressor FE384_14865 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FE384_14870 PF08240 Alcohol dehydrogenase GroES-like domain FE384_14870 PF00107 Zinc-binding dehydrogenase FE384_14875 PF02378 Phosphotransferase system, EIIC FE384_14875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_14880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_14885 PF00456 Transketolase, thiamine diphosphate binding domain FE384_14885 PF02779 Transketolase, pyrimidine binding domain FE384_14885 PF02780 Transketolase, C-terminal domain FE384_14890 PF01435 Peptidase family M48 FE384_14895 PF00491 Arginase family FE384_14900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FE384_14900 PF17944 Arginine decarboxylase C-terminal helical extension FE384_14900 PF17810 Arginine decarboxylase helical bundle domain FE384_14905 PF11036 Virulence promoting factor FE384_14910 PF00438 S-adenosylmethionine synthetase, N-terminal domain FE384_14910 PF02772 S-adenosylmethionine synthetase, central domain FE384_14910 PF02773 S-adenosylmethionine synthetase, C-terminal domain FE384_14915 PF00083 Sugar (and other) transporter FE384_14920 PF10263 SprT-like family FE384_14920 PF17283 SprT-like zinc ribbon domain FE384_14925 PF04231 Endonuclease I FE384_14930 PF04452 RNA methyltransferase FE384_14935 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FE384_14935 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FE384_14940 PF02622 Uncharacterized ACR, COG1678 FE384_14945 PF03652 Holliday junction resolvase FE384_14950 PF00437 Type II/IV secretion system protein FE384_14955 PF01168 Alanine racemase, N-terminal domain FE384_14960 PF02325 YGGT family FE384_14965 PF02594 Uncharacterised ACR, YggU family COG1872 FE384_14970 PF01725 Ham1 family FE384_14975 PF06969 HemN C-terminal domain FE384_14975 PF04055 Radical SAM superfamily FE384_14980 PF06717 Protein of unknown function (DUF1202) FE384_14985 PF17763 Glutaminase/Asparaginase C-terminal domain FE384_14985 PF00710 Asparaginase, N-terminal FE384_14990 PF11101 Protein of unknown function (DUF2884) FE384_14995 PF04320 Protein with unknown function (DUF469) FE384_15000 PF02390 Putative methyltransferase FE384_15005 PF00633 Helix-hairpin-helix motif FE384_15005 PF00730 HhH-GPD superfamily base excision DNA repair protein FE384_15005 PF14815 NUDIX domain FE384_15005 PF10576 Iron-sulfur binding domain of endonuclease III FE384_15010 PF04362 Bacterial Fe(2+) trafficking FE384_15015 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FE384_15015 PF01464 Transglycosylase SLT domain FE384_15020 PF03825 Nucleoside H+ symporter FE384_15025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FE384_15025 PF01276 Orn/Lys/Arg decarboxylase, major domain FE384_15025 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FE384_15030 PF04474 Protein of unknown function (DUF554) FE384_15040 PF04612 Type II secretion system (T2SS), protein M FE384_15050 PF11356 Type II secretion system protein C FE384_15055 PF16549 Type II secretion system (T2SS) pilotin, S protein FE384_15060 PF06750 Bacterial Peptidase A24 N-terminal domain FE384_15060 PF01478 Type IV leader peptidase family FE384_15065 PF13322 Domain of unknown function (DUF4092) FE384_15065 PF13402 Peptidase M60, enhancin and enhancin-like FE384_15065 PF17291 N-terminal domain of M60-like peptidases FE384_15070 PF02652 L-lactate permease FE384_15075 PF01274 Malate synthase FE384_15080 PF03928 Haem-degrading FE384_15085 PF13183 4Fe-4S dicluster domain FE384_15085 PF02754 Cysteine-rich domain FE384_15090 PF01565 FAD binding domain FE384_15095 PF02913 FAD linked oxidases, C-terminal domain FE384_15095 PF01565 FAD binding domain FE384_15100 PF00392 Bacterial regulatory proteins, gntR family FE384_15100 PF07729 FCD domain FE384_15110 PF01609 Transposase DDE domain FE384_15110 PF05598 Transposase domain (DUF772) FE384_15115 PF01943 Polysaccharide biosynthesis protein FE384_15135 PF01384 Phosphate transporter family FE384_15140 PF05257 CHAP domain FE384_15140 PF03738 Glutathionylspermidine synthase preATP-grasp FE384_15145 PF02798 Glutathione S-transferase, N-terminal domain FE384_15150 PF01455 HupF/HypC family FE384_15155 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FE384_15160 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE FE384_15165 PF01750 Hydrogenase maturation protease FE384_15170 PF00374 Nickel-dependent hydrogenase FE384_15175 PF03916 Polysulphide reductase, NrfD FE384_15180 PF13247 4Fe-4S dicluster domain FE384_15185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE384_15185 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FE384_15190 PF11115 Protein of unknown function (DUF2623) FE384_15200 PF00248 Aldo/keto reductase family FE384_15205 PF03350 Uncharacterized protein family, UPF0114 FE384_15215 PF02472 Biopolymer transport protein ExbD/TolR FE384_15220 PF01618 MotA/TolQ/ExbB proton channel family FE384_15225 PF01053 Cys/Met metabolism PLP-dependent enzyme FE384_15230 PF09335 SNARE associated Golgi protein FE384_15235 PF12833 Helix-turn-helix domain FE384_15235 PF06719 AraC-type transcriptional regulator N-terminus FE384_15240 PF00465 Iron-containing alcohol dehydrogenase FE384_15245 PF00248 Aldo/keto reductase family FE384_15250 PF12883 Protein of unknown function (DUF3828) FE384_15255 PF04728 Lipoprotein leucine-zipper FE384_15260 PF08497 Radical SAM N-terminal FE384_15260 PF11842 Domain of unknown function (DUF3362) FE384_15260 PF04055 Radical SAM superfamily FE384_15265 PF00394 Multicopper oxidase FE384_15265 PF07732 Multicopper oxidase FE384_15265 PF07731 Multicopper oxidase FE384_15270 PF01553 Acyltransferase FE384_15275 PF00521 DNA gyrase/topoisomerase IV, subunit A FE384_15275 PF03989 DNA gyrase C-terminal domain, beta-propeller FE384_15280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_15285 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA FE384_15290 PF15723 Motility quorum-sensing regulator, toxin of MqsA FE384_15295 PF06445 GyrI-like small molecule binding domain FE384_15300 PF04076 Bacterial OB fold (BOF) protein FE384_15305 PF00072 Response regulator receiver domain FE384_15305 PF00486 Transcriptional regulatory protein, C terminal FE384_15310 PF00512 His Kinase A (phospho-acceptor) domain FE384_15310 PF08521 Two-component sensor kinase N-terminal FE384_15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_15315 PF10840 Protein of unknown function (DUF2645) FE384_15320 PF02525 Flavodoxin-like fold FE384_15325 PF03992 Antibiotic biosynthesis monooxygenase FE384_15330 PF00204 DNA gyrase B FE384_15330 PF00986 DNA gyrase B subunit, carboxyl terminus FE384_15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_15330 PF01751 Toprim domain FE384_15335 PF05728 Uncharacterised protein family (UPF0227) FE384_15340 PF00149 Calcineurin-like phosphoesterase FE384_15345 PF06853 Protein of unknown function (DUF1249) FE384_15350 PF00293 NUDIX domain FE384_15355 PF02321 Outer membrane efflux protein FE384_15360 PF06693 Protein of unknown function (DUF1190) FE384_15365 PF03738 Glutathionylspermidine synthase preATP-grasp FE384_15370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FE384_15375 PF02535 ZIP Zinc transporter FE384_15380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FE384_15385 PF04380 Membrane fusogenic activity FE384_15390 PF00419 Fimbrial protein FE384_15400 PF13954 PapC N-terminal domain FE384_15400 PF00577 Outer membrane usher protein FE384_15400 PF13953 PapC C-terminal domain FE384_15405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_15405 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_15415 PF08971 Glycogen synthesis protein FE384_15420 PF07290 Protein of unknown function (DUF1449) FE384_15425 PF01145 SPFH domain / Band 7 family FE384_15425 PF15975 Flotillin FE384_15445 PF03710 Glutamate-ammonia ligase adenylyltransferase FE384_15445 PF08335 GlnD PII-uridylyltransferase FE384_15450 PF01928 CYTH domain FE384_15455 PF08239 Bacterial SH3 domain FE384_15460 PF01743 Poly A polymerase head domain FE384_15460 PF01966 HD domain FE384_15460 PF12627 Probable RNA and SrmB- binding site of polymerase A FE384_15465 PF02673 Bacitracin resistance protein BacA FE384_15470 PF02152 Dihydroneopterin aldolase FE384_15475 PF02660 Glycerol-3-phosphate acyltransferase FE384_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_15480 PF03466 LysR substrate binding domain FE384_15485 PF05681 Fumarate hydratase (Fumerase) FE384_15490 PF05683 Fumarase C-terminus FE384_15495 PF00939 Sodium:sulfate symporter transmembrane region FE384_15500 PF00814 Glycoprotease family FE384_15505 PF01165 Ribosomal protein S21 FE384_15510 PF08278 DNA primase DnaG DnaB-binding FE384_15510 PF10410 DnaB-helicase binding domain of primase FE384_15510 PF01807 CHC2 zinc finger FE384_15510 PF08275 DNA primase catalytic core, N-terminal domain FE384_15515 PF04546 Sigma-70, non-essential region FE384_15515 PF04539 Sigma-70 region 3 FE384_15515 PF04542 Sigma-70 region 2 FE384_15515 PF03979 Sigma-70 factor, region 1.1 FE384_15515 PF04545 Sigma-70, region 4 FE384_15515 PF00140 Sigma-70 factor, region 1.2 FE384_15520 PF03167 Uracil DNA glycosylase superfamily FE384_15530 PF04954 Siderophore-interacting protein FE384_15530 PF08021 Siderophore-interacting FAD-binding domain FE384_15535 PF03551 Transcriptional regulator PadR-like family FE384_15540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE384_15540 PF08447 PAS fold FE384_15545 PF00202 Aminotransferase class-III FE384_15550 PF01588 Putative tRNA binding domain FE384_15555 PF00356 Bacterial regulatory proteins, lacI family FE384_15560 PF02929 Beta galactosidase small chain FE384_15560 PF16353 Domain of unknown function(DUF4981) FE384_15560 PF02837 Glycosyl hydrolases family 2, sugar binding domain FE384_15560 PF00703 Glycosyl hydrolases family 2 FE384_15560 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FE384_15565 PF04074 YhcH/YjgK/YiaL FE384_15570 PF13520 Amino acid permease FE384_15580 PF01204 Trehalase FE384_15585 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_15585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE384_15590 PF01381 Helix-turn-helix FE384_15595 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system FE384_15600 PF05175 Methyltransferase small domain FE384_15605 PF01863 Protein of unknown function DUF45 FE384_15610 PF02698 DUF218 domain FE384_15615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE384_15620 PF03741 Integral membrane protein TerC family FE384_15625 PF00375 Sodium:dicarboxylate symporter family FE384_15630 PF10688 Bacterial inner membrane protein FE384_15635 PF08666 SAF domain FE384_15635 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FE384_15640 PF02614 Glucuronate isomerase FE384_15645 PF07690 Major Facilitator Superfamily FE384_15650 PF07729 FCD domain FE384_15650 PF00392 Bacterial regulatory proteins, gntR family FE384_15655 PF09335 SNARE associated Golgi protein FE384_15660 PF13721 SecD export protein N-terminal TM region FE384_15665 PF06476 Protein of unknown function (DUF1090) FE384_15670 PF05957 Bacterial protein of unknown function (DUF883) FE384_15675 PF07332 Putative Actinobacterial Holin-X, holin superfamily III FE384_15680 PF13997 YqjK-like protein FE384_15685 PF07681 DoxX FE384_15690 PF13409 Glutathione S-transferase, N-terminal domain FE384_15695 PF05656 Protein of unknown function (DUF805) FE384_15700 PF05656 Protein of unknown function (DUF805) FE384_15705 PF03466 LysR substrate binding domain FE384_15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_15710 PF02678 Pirin FE384_15710 PF17954 Quercetinase C-terminal cupin domain FE384_15720 PF03313 Serine dehydratase alpha chain FE384_15730 PF03313 Serine dehydratase alpha chain FE384_15730 PF03315 Serine dehydratase beta chain FE384_15735 PF01042 Endoribonuclease L-PSP FE384_15740 PF01228 Glycine radical FE384_15740 PF02901 Pyruvate formate lyase-like FE384_15745 PF00871 Acetokinase family FE384_15750 PF03222 Tryptophan/tyrosine permease family FE384_15755 PF00291 Pyridoxal-phosphate dependent enzyme FE384_15760 PF03466 LysR substrate binding domain FE384_15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_15785 PF02595 Glycerate kinase family FE384_15790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE384_15790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE384_15795 PF03328 HpcH/HpaI aldolase/citrate lyase family FE384_15800 PF07690 Major Facilitator Superfamily FE384_15805 PF08666 SAF domain FE384_15805 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FE384_15810 PF15937 prlF antitoxin for toxin YhaV_toxin FE384_15815 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system FE384_15820 PF00455 DeoR C terminal sensor domain FE384_15820 PF08220 DeoR-like helix-turn-helix domain FE384_15825 PF08013 Tagatose 6 phosphate kinase FE384_15830 PF03830 PTS system sorbose subfamily IIB component FE384_15845 PF01380 SIS domain FE384_15850 PF01116 Fructose-bisphosphate aldolase class-II FE384_15855 PF03830 PTS system sorbose subfamily IIB component FE384_15860 PF03609 PTS system sorbose-specific iic component FE384_15865 PF03613 PTS system mannose/fructose/sorbose family IID component FE384_15870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FE384_15875 PF00419 Fimbrial protein FE384_15880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_15880 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_15885 PF13953 PapC C-terminal domain FE384_15885 PF13954 PapC N-terminal domain FE384_15885 PF00577 Outer membrane usher protein FE384_15890 PF00419 Fimbrial protein FE384_15895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE384_15900 PF04348 LppC putative lipoprotein FE384_15905 PF02021 Uncharacterised protein family UPF0102 FE384_15910 PF13580 SIS domain FE384_15915 PF04972 BON domain FE384_15920 PF03773 Predicted permease FE384_15925 PF13460 NAD(P)H-binding FE384_15930 PF01965 DJ-1/PfpI family FE384_15940 PF01541 GIY-YIG catalytic domain FE384_15945 PF13508 Acetyltransferase (GNAT) domain FE384_15965 PF00296 Luciferase-like monooxygenase FE384_15970 PF03222 Tryptophan/tyrosine permease family FE384_15975 PF00270 DEAD/DEAH box helicase FE384_15975 PF00271 Helicase conserved C-terminal domain FE384_15975 PF12343 Cold shock protein DEAD box A FE384_15975 PF03880 DbpA RNA binding domain FE384_15985 PF07719 Tetratricopeptide repeat FE384_15985 PF13181 Tetratricopeptide repeat FE384_15990 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FE384_15990 PF00575 S1 RNA binding domain FE384_15990 PF03725 3' exoribonuclease family, domain 2 FE384_15990 PF01138 3' exoribonuclease family, domain 1 FE384_15990 PF00013 KH domain FE384_15995 PF00312 Ribosomal protein S15 FE384_16000 PF09157 Pseudouridine synthase II TruB, C-terminal FE384_16000 PF01509 TruB family pseudouridylate synthase (N terminal domain) FE384_16000 PF16198 tRNA pseudouridylate synthase B C-terminal domain FE384_16005 PF02033 Ribosome-binding factor A FE384_16010 PF04760 Translation initiation factor IF-2, N-terminal region FE384_16010 PF00009 Elongation factor Tu GTP binding domain FE384_16010 PF08364 Bacterial translation initiation factor IF-2 associated region FE384_16010 PF11987 Translation-initiation factor 2 FE384_16015 PF08529 NusA N-terminal domain FE384_16015 PF13184 NusA-like KH domain FE384_16015 PF00575 S1 RNA binding domain FE384_16020 PF17384 RimP C-terminal SH3 domain FE384_16020 PF02576 RimP N-terminal domain FE384_16030 PF00764 Arginosuccinate synthase FE384_16035 PF00884 Sulfatase FE384_16045 PF03840 Preprotein translocase SecG subunit FE384_16050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE384_16050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE384_16050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE384_16050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE384_16055 PF00809 Pterin binding enzyme FE384_16060 PF00004 ATPase family associated with various cellular activities (AAA) FE384_16060 PF17862 AAA+ lid domain FE384_16060 PF06480 FtsH Extracellular FE384_16060 PF01434 Peptidase family M41 FE384_16065 PF01728 FtsJ-like methyltransferase FE384_16070 PF01985 CRS1 / YhbY (CRM) domain FE384_16075 PF03449 Transcription elongation factor, N-terminal FE384_16075 PF01272 Transcription elongation factor, GreA/GreB, C-term FE384_16080 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FE384_16085 PF01926 50S ribosome-binding GTPase FE384_16085 PF01018 GTP1/OBG FE384_16090 PF00892 EamA-like transporter family FE384_16095 PF01016 Ribosomal L27 protein FE384_16100 PF00829 Ribosomal prokaryotic L21 protein FE384_16105 PF00348 Polyprenyl synthetase FE384_16110 PF13693 Winged helix-turn-helix DNA-binding FE384_16115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FE384_16120 PF01722 BolA-like protein FE384_16125 PF13466 STAS domain FE384_16130 PF05494 MlaC protein FE384_16135 PF02470 MlaD protein FE384_16140 PF02405 Permease MlaE FE384_16145 PF00005 ABC transporter FE384_16150 PF01699 Sodium/calcium exchanger protein FE384_16155 PF01380 SIS domain FE384_16155 PF00571 CBS domain FE384_16165 PF06835 Lipopolysaccharide-assembly, LptC-related FE384_16170 PF03968 OstA-like protein FE384_16175 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE384_16175 PF00005 ABC transporter FE384_16180 PF04963 Sigma-54 factor, core binding domain FE384_16180 PF04552 Sigma-54, DNA binding domain FE384_16180 PF00309 Sigma-54 factor, Activator interacting domain (AID) FE384_16185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FE384_16190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_16195 PF03668 P-loop ATPase protein family FE384_16200 PF00381 PTS HPr component phosphorylation site FE384_16205 PF10707 PhoP regulatory network protein YrbL FE384_16210 PF00912 Transglycosylase FE384_16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_16220 PF18415 Histidine kinase receptor ArcB trans-membrane domain FE384_16220 PF01627 Hpt domain FE384_16220 PF00072 Response regulator receiver domain FE384_16220 PF00512 His Kinase A (phospho-acceptor) domain FE384_16220 PF00989 PAS fold FE384_16225 PF04055 Radical SAM superfamily FE384_16225 PF16199 Radical_SAM C-terminal domain FE384_16230 PF01645 Conserved region in glutamate synthase FE384_16230 PF04898 Glutamate synthase central domain FE384_16230 PF01493 GXGXG motif FE384_16230 PF00310 Glutamine amidotransferases class-II FE384_16235 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_16235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE384_16240 PF06551 Protein of unknown function (DUF1120) FE384_16245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_16250 PF13953 PapC C-terminal domain FE384_16250 PF13954 PapC N-terminal domain FE384_16250 PF00577 Outer membrane usher protein FE384_16260 PF05598 Transposase domain (DUF772) FE384_16260 PF01609 Transposase DDE domain FE384_16265 PF06551 Protein of unknown function (DUF1120) FE384_16270 PF17761 DUF1016 N-terminal domain FE384_16270 PF06250 YhcG PDDEXK nuclease domain FE384_16275 PF04074 YhcH/YjgK/YiaL FE384_16280 PF00480 ROK family FE384_16285 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FE384_16290 PF07690 Major Facilitator Superfamily FE384_16295 PF00701 Dihydrodipicolinate synthetase family FE384_16300 PF07729 FCD domain FE384_16300 PF00392 Bacterial regulatory proteins, gntR family FE384_16310 PF04386 Stringent starvation protein B FE384_16315 PF02798 Glutathione S-transferase, N-terminal domain FE384_16315 PF00043 Glutathione S-transferase, C-terminal domain FE384_16320 PF00380 Ribosomal protein S9/S16 FE384_16325 PF00572 Ribosomal protein L13 FE384_16330 PF03969 AFG1-like ATPase FE384_16335 PF06295 Protein of unknown function (DUF1043) FE384_16340 PF13180 PDZ domain FE384_16340 PF00595 PDZ domain FE384_16345 PF13180 PDZ domain FE384_16350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FE384_16350 PF00056 lactate/malate dehydrogenase, NAD binding domain FE384_16355 PF02863 Arginine repressor, C-terminal domain FE384_16355 PF01316 Arginine repressor, DNA binding domain FE384_16360 PF07338 Protein of unknown function (DUF1471) FE384_16365 PF01337 Barstar (barnase inhibitor) FE384_16370 PF04632 Fusaric acid resistance protein family FE384_16375 PF13533 Biotin-lipoyl like FE384_16380 PF07869 Protein of unknown function (DUF1656) FE384_16385 PF03466 LysR substrate binding domain FE384_16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_16390 PF01523 Putative modulator of DNA gyrase FE384_16395 PF13502 AsmA-like C-terminal region FE384_16395 PF13116 Protein of unknown function FE384_16400 PF10150 Ribonuclease E/G family FE384_16400 PF00575 S1 RNA binding domain FE384_16405 PF02545 Maf-like protein FE384_16410 PF04093 rod shape-determining protein MreD FE384_16415 PF04085 rod shape-determining protein MreC FE384_16425 PF00563 EAL domain FE384_16425 PF17157 Gammaproteobacterial periplasmic sensor domain FE384_16425 PF00990 Diguanylate cyclase, GGDEF domain FE384_16430 PF00107 Zinc-binding dehydrogenase FE384_16430 PF08240 Alcohol dehydrogenase GroES-like domain FE384_16435 PF00364 Biotin-requiring enzyme FE384_16440 PF02785 Biotin carboxylase C-terminal domain FE384_16440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE384_16440 PF00289 Biotin carboxylase, N-terminal domain FE384_16445 PF06196 Protein of unknown function (DUF997) FE384_16450 PF00474 Sodium:solute symporter family FE384_16460 PF01207 Dihydrouridine synthase (Dus) FE384_16465 PF02954 Bacterial regulatory protein, Fis family FE384_16470 PF01555 DNA methylase FE384_16475 PF10831 Protein of unknown function (DUF2556) FE384_16480 PF00440 Bacterial regulatory proteins, tetR family FE384_16480 PF08361 MAATS-type transcriptional repressor, C-terminal region FE384_16485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_16485 PF00529 HlyD membrane-fusion protein of T1SS FE384_16490 PF00873 AcrB/AcrD/AcrF family FE384_16505 PF00528 Binding-protein-dependent transport system inner membrane component FE384_16510 PF00528 Binding-protein-dependent transport system inner membrane component FE384_16515 PF00005 ABC transporter FE384_16560 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_16565 PF07369 Protein of unknown function (DUF1488) FE384_16570 PF08501 Shikimate dehydrogenase substrate binding domain FE384_16570 PF01488 Shikimate / quinate 5-dehydrogenase FE384_16570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FE384_16575 PF01300 Telomere recombination FE384_16580 PF01396 Topoisomerase DNA binding C4 zinc finger FE384_16585 PF04361 Protein of unknown function (DUF494) FE384_16590 PF02481 DNA recombination-mediator protein A FE384_16590 PF17782 DprA winged helix domain FE384_16595 PF01327 Polypeptide deformylase FE384_16600 PF02911 Formyl transferase, C-terminal domain FE384_16600 PF00551 Formyl transferase FE384_16605 PF01189 16S rRNA methyltransferase RsmB/F FE384_16605 PF01029 NusB family FE384_16610 PF02254 TrkA-N domain FE384_16610 PF02080 TrkA-C domain FE384_16615 PF01741 Large-conductance mechanosensitive channel, MscL FE384_16620 PF03889 Alternative ribosome-rescue factor A FE384_16625 PF13411 MerR HTH family regulatory protein FE384_16630 PF09350 Domain of unknown function (DUF1992) FE384_16635 PF01196 Ribosomal protein L17 FE384_16640 PF01000 RNA polymerase Rpb3/RpoA insert domain FE384_16640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FE384_16640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FE384_16645 PF01479 S4 domain FE384_16645 PF00163 Ribosomal protein S4/S9 N-terminal domain FE384_16650 PF00411 Ribosomal protein S11 FE384_16655 PF00416 Ribosomal protein S13/S18 FE384_16660 PF00444 Ribosomal protein L36 FE384_16665 PF00344 SecY translocase FE384_16670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FE384_16675 PF00327 Ribosomal protein L30p/L7e FE384_16680 PF03719 Ribosomal protein S5, C-terminal domain FE384_16680 PF00333 Ribosomal protein S5, N-terminal domain FE384_16685 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FE384_16690 PF00347 Ribosomal protein L6 FE384_16695 PF00410 Ribosomal protein S8 FE384_16700 PF00253 Ribosomal protein S14p/S29e FE384_16705 PF00673 ribosomal L5P family C-terminus FE384_16705 PF00281 Ribosomal protein L5 FE384_16710 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FE384_16710 PF00467 KOW motif FE384_16715 PF00238 Ribosomal protein L14p/L23e FE384_16720 PF00366 Ribosomal protein S17 FE384_16725 PF00831 Ribosomal L29 protein FE384_16730 PF00252 Ribosomal protein L16p/L10e FE384_16735 PF00189 Ribosomal protein S3, C-terminal domain FE384_16735 PF07650 KH domain FE384_16740 PF00237 Ribosomal protein L22p/L17e FE384_16745 PF00203 Ribosomal protein S19 FE384_16750 PF00181 Ribosomal Proteins L2, RNA binding domain FE384_16750 PF03947 Ribosomal Proteins L2, C-terminal domain FE384_16755 PF00276 Ribosomal protein L23 FE384_16760 PF00573 Ribosomal protein L4/L1 family FE384_16765 PF00297 Ribosomal protein L3 FE384_16770 PF00338 Ribosomal protein S10p/S20e FE384_16780 PF13401 AAA domain FE384_16780 PF01471 Putative peptidoglycan binding domain FE384_16785 PF11356 Type II secretion system protein C FE384_16790 PF00263 Bacterial type II and III secretion system protein FE384_16790 PF03958 Bacterial type II/III secretion system short domain FE384_16795 PF00437 Type II/IV secretion system protein FE384_16800 PF00482 Type II secretion system (T2SS), protein F FE384_16805 PF08334 Type II secretion system (T2SS), protein G FE384_16805 PF07963 Prokaryotic N-terminal methylation motif FE384_16810 PF07963 Prokaryotic N-terminal methylation motif FE384_16810 PF12019 Type II transport protein GspH FE384_16815 PF07963 Prokaryotic N-terminal methylation motif FE384_16815 PF02501 Type II secretion system (T2SS), protein I FE384_16820 PF07963 Prokaryotic N-terminal methylation motif FE384_16820 PF11612 Type II secretion system (T2SS), protein J FE384_16825 PF03934 Type II secretion system (T2SS), protein K FE384_16830 PF05134 Type II secretion system (T2SS), protein L FE384_16830 PF12693 GspL periplasmic domain FE384_16835 PF04612 Type II secretion system (T2SS), protein M FE384_16840 PF01478 Type IV leader peptidase family FE384_16845 PF00210 Ferritin-like domain FE384_16850 PF04324 BFD-like [2Fe-2S] binding domain FE384_16855 PF02839 Carbohydrate binding domain FE384_16860 PF03143 Elongation factor Tu C-terminal domain FE384_16860 PF00009 Elongation factor Tu GTP binding domain FE384_16860 PF03144 Elongation factor Tu domain 2 FE384_16865 PF03764 Elongation factor G, domain IV FE384_16865 PF00009 Elongation factor Tu GTP binding domain FE384_16865 PF00679 Elongation factor G C-terminus FE384_16865 PF14492 Elongation Factor G, domain II FE384_16865 PF03144 Elongation factor Tu domain 2 FE384_16870 PF00177 Ribosomal protein S7p/S5e FE384_16875 PF00164 Ribosomal protein S12/S23 FE384_16880 PF04077 DsrH like protein FE384_16885 PF02635 DsrE/DsrF-like family FE384_16890 PF02635 DsrE/DsrF-like family FE384_16895 PF08348 YheO-like PAS domain FE384_16895 PF13309 HTH domain FE384_16900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE384_16900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FE384_16905 PF04102 SlyX FE384_16910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE384_16915 PF09526 Probable metal-binding protein (DUF2387) FE384_16920 PF02254 TrkA-N domain FE384_16920 PF00999 Sodium/hydrogen exchanger family FE384_16925 PF02525 Flavodoxin-like fold FE384_16930 PF00005 ABC transporter FE384_16930 PF12848 ABC transporter FE384_16935 PF00561 alpha/beta hydrolase fold FE384_16940 PF06794 Uncharacterised protein family (UPF0270) FE384_16945 PF00485 Phosphoribulokinase / Uridine kinase family FE384_16950 PF02566 OsmC-like protein FE384_16955 PF00027 Cyclic nucleotide-binding domain FE384_16955 PF13545 Crp-like helix-turn-helix domain FE384_16960 PF12805 FUSC-like inner membrane protein yccS FE384_16965 PF00202 Aminotransferase class-III FE384_16970 PF00117 Glutamine amidotransferase class-I FE384_16975 PF02661 Fic/DOC family FE384_16980 PF10832 Protein of unknown function (DUF2559) FE384_16985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FE384_16990 PF07690 Major Facilitator Superfamily FE384_16995 PF04324 BFD-like [2Fe-2S] binding domain FE384_16995 PF18267 Rubredoxin NAD+ reductase C-terminal domain FE384_16995 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_16995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FE384_16995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FE384_17000 PF13806 Rieske-like [2Fe-2S] domain FE384_17005 PF01226 Formate/nitrite transporter FE384_17010 PF14824 Sirohaem biosynthesis protein central FE384_17010 PF10414 Sirohaem synthase dimerisation region FE384_17010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE384_17015 PF13978 Protein of unknown function (DUF4223) FE384_17020 PF13520 Amino acid permease FE384_17025 PF01380 SIS domain FE384_17030 PF01261 Xylose isomerase-like TIM barrel FE384_17035 PF00294 pfkB family carbohydrate kinase FE384_17040 PF00392 Bacterial regulatory proteins, gntR family FE384_17040 PF07702 UTRA domain FE384_17045 PF00155 Aminotransferase class I and II FE384_17050 PF10797 Protein of unknown function FE384_17055 PF10941 Protein of unknown function DUF2620 FE384_17060 PF02126 Phosphotriesterase family FE384_17065 PF01676 Metalloenzyme superfamily FE384_17070 PF01168 Alanine racemase, N-terminal domain FE384_17080 PF14502 Helix-turn-helix domain FE384_17080 PF14503 YhfZ C-terminal domain FE384_17090 PF00579 tRNA synthetases class I (W and Y) FE384_17095 PF13419 Haloacid dehalogenase-like hydrolase FE384_17100 PF00834 Ribulose-phosphate 3 epimerase family FE384_17105 PF02086 D12 class N6 adenine-specific DNA methyltransferase FE384_17110 PF05036 Sporulation related domain FE384_17115 PF01761 3-dehydroquinate synthase FE384_17120 PF01202 Shikimate kinase FE384_17125 PF00263 Bacterial type II and III secretion system protein FE384_17125 PF03958 Bacterial type II/III secretion system short domain FE384_17130 PF10748 DNA utilization proteins HofP FE384_17140 PF05137 Fimbrial assembly protein (PilN) FE384_17150 PF17092 Penicillin-binding protein OB-like domain FE384_17150 PF00905 Penicillin binding protein transpeptidase domain FE384_17150 PF00912 Transglycosylase FE384_17155 PF00293 NUDIX domain FE384_17160 PF07095 Intracellular growth attenuator protein IgaA FE384_17165 PF13419 Haloacid dehalogenase-like hydrolase FE384_17170 PF01479 S4 domain FE384_17175 PF01430 Hsp33 protein FE384_17180 PF13687 Domain of unknown function (DUF4153) FE384_17185 PF01293 Phosphoenolpyruvate carboxykinase FE384_17190 PF00512 His Kinase A (phospho-acceptor) domain FE384_17190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_17190 PF00672 HAMP domain FE384_17195 PF00486 Transcriptional regulatory protein, C terminal FE384_17195 PF00072 Response regulator receiver domain FE384_17200 PF03449 Transcription elongation factor, N-terminal FE384_17200 PF01272 Transcription elongation factor, GreA/GreB, C-term FE384_17205 PF09371 Tex-like protein N-terminal domain FE384_17205 PF17674 HHH domain FE384_17205 PF16921 Tex protein YqgF-like domain FE384_17205 PF00575 S1 RNA binding domain FE384_17210 PF04023 FeoA domain FE384_17215 PF02421 Ferrous iron transport protein B FE384_17215 PF17910 FeoB cytosolic helical domain FE384_17215 PF07664 Ferrous iron transport protein B C terminus FE384_17215 PF07670 Nucleoside recognition FE384_17220 PF09012 FeoC like transcriptional regulator FE384_17225 PF04754 Putative transposase, YhgA-like FE384_17230 PF00561 alpha/beta hydrolase fold FE384_17235 PF00156 Phosphoribosyl transferase domain FE384_17240 PF01106 NifU-like domain FE384_17240 PF01521 Iron-sulphur cluster biosynthesis FE384_17245 PF02447 GntP family permease FE384_17250 PF02446 4-alpha-glucanotransferase FE384_17255 PF00343 Carbohydrate phosphorylase FE384_17260 PF17874 MalT-like TPR region FE384_17260 PF00196 Bacterial regulatory proteins, luxR family FE384_17265 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain FE384_17265 PF01137 RNA 3'-terminal phosphate cyclase FE384_17270 PF01139 tRNA-splicing ligase RtcB FE384_17275 PF00158 Sigma-54 interaction domain FE384_17275 PF06956 Regulator of RNA terminal phosphate cyclase FE384_17280 PF00455 DeoR C terminal sensor domain FE384_17280 PF08220 DeoR-like helix-turn-helix domain FE384_17285 PF01694 Rhomboid family FE384_17285 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FE384_17290 PF00581 Rhodanese-like domain FE384_17295 PF01266 FAD dependent oxidoreductase FE384_17295 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FE384_17305 PF00343 Carbohydrate phosphorylase FE384_17310 PF00534 Glycosyl transferases group 1 FE384_17310 PF08323 Starch synthase catalytic domain FE384_17315 PF00483 Nucleotidyl transferase FE384_17320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE384_17320 PF18390 Glycogen debranching enzyme C-terminal domain FE384_17320 PF00128 Alpha amylase, catalytic domain FE384_17325 PF00128 Alpha amylase, catalytic domain FE384_17325 PF02806 Alpha amylase, C-terminal all-beta domain FE384_17325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE384_17330 PF02774 Semialdehyde dehydrogenase, dimerisation domain FE384_17330 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE384_17335 PF01914 MarC family integral membrane protein FE384_17340 PF02447 GntP family permease FE384_17345 PF01202 Shikimate kinase FE384_17350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE384_17350 PF00356 Bacterial regulatory proteins, lacI family FE384_17355 PF17954 Quercetinase C-terminal cupin domain FE384_17355 PF02678 Pirin FE384_17360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE384_17360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE384_17365 PF00583 Acetyltransferase (GNAT) family FE384_17370 PF05638 Type VI secretion system effector, Hcp FE384_17395 PF15567 Immunity protein 35 FE384_17405 PF10956 Protein of unknown function (DUF2756) FE384_17410 PF03009 Glycerophosphoryl diester phosphodiesterase family FE384_17415 PF00005 ABC transporter FE384_17415 PF17912 MalK OB fold domain FE384_17420 PF00528 Binding-protein-dependent transport system inner membrane component FE384_17425 PF00528 Binding-protein-dependent transport system inner membrane component FE384_17430 PF13416 Bacterial extracellular solute-binding protein FE384_17435 PF00005 ABC transporter FE384_17440 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE384_17440 PF00005 ABC transporter FE384_17445 PF02653 Branched-chain amino acid transport system / permease component FE384_17445 PF11862 Domain of unknown function (DUF3382) FE384_17450 PF02653 Branched-chain amino acid transport system / permease component FE384_17455 PF13458 Periplasmic binding protein FE384_17460 PF12568 Acetyltransferase (GNAT) domain, PanZ FE384_17465 PF13458 Periplasmic binding protein FE384_17470 PF04542 Sigma-70 region 2 FE384_17470 PF04545 Sigma-70, region 4 FE384_17475 PF02687 FtsX-like permease family FE384_17475 PF18075 FtsX extracellular domain FE384_17480 PF00005 ABC transporter FE384_17485 PF02881 SRP54-type protein, helical bundle domain FE384_17485 PF00448 SRP54-type protein, GTPase domain FE384_17495 PF06611 Protein of unknown function (DUF1145) FE384_17500 PF10694 Protein of unknown function (DUF2500) FE384_17505 PF07947 YhhN family FE384_17510 PF00403 Heavy-metal-associated domain FE384_17515 PF01206 Sulfurtransferase TusA FE384_17520 PF02592 Putative vitamin uptake transporter FE384_17525 PF08786 DcrB FE384_17530 PF07690 Major Facilitator Superfamily FE384_17535 PF01594 AI-2E family transporter FE384_17540 PF01648 4'-phosphopantetheinyl transferase superfamily FE384_17545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_17550 PF00528 Binding-protein-dependent transport system inner membrane component FE384_17555 PF00528 Binding-protein-dependent transport system inner membrane component FE384_17560 PF00005 ABC transporter FE384_17565 PF00005 ABC transporter FE384_17570 PF08753 NikR C terminal nickel binding domain FE384_17570 PF01402 Ribbon-helix-helix protein, copG family FE384_17575 PF03527 RHS protein FE384_17575 PF14220 Domain of unknown function (DUF4329) FE384_17575 PF05593 RHS Repeat FE384_17580 PF15631 NTF2 fold immunity protein FE384_17585 PF03130 PBS lyase HEAT-like repeat FE384_17590 PF13808 DDE_Tnp_1-associated FE384_17590 PF01609 Transposase DDE domain FE384_17600 PF00005 ABC transporter FE384_17605 PF13533 Biotin-lipoyl like FE384_17610 PF13258 Domain of unknown function (DUF4049) FE384_17620 PF10951 Protein of unknown function (DUF2776) FE384_17630 PF01384 Phosphate transporter family FE384_17635 PF10625 Universal stress protein B (UspB) FE384_17640 PF00582 Universal stress protein family FE384_17645 PF00854 POT family FE384_17650 PF04445 Putative SAM-dependent methyltransferase FE384_17655 PF01432 Peptidase family M3 FE384_17660 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FE384_17665 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_17665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE384_17675 PF01022 Bacterial regulatory protein, arsR family FE384_17680 PF02040 Arsenical pump membrane protein FE384_17685 PF03960 ArsC family FE384_17695 PF05598 Transposase domain (DUF772) FE384_17695 PF01609 Transposase DDE domain FE384_17705 PF03843 Outer membrane lipoprotein Slp family FE384_17710 PF00196 Bacterial regulatory proteins, luxR family FE384_17715 PF02308 MgtC family FE384_17720 PF06411 HdeA/HdeB family FE384_17725 PF06411 HdeA/HdeB family FE384_17730 PF03729 Short repeat of unknown function (DUF308) FE384_17735 PF00196 Bacterial regulatory proteins, luxR family FE384_17745 PF00529 HlyD membrane-fusion protein of T1SS FE384_17745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_17755 PF12833 Helix-turn-helix domain FE384_17760 PF12833 Helix-turn-helix domain FE384_17765 PF00282 Pyridoxal-dependent decarboxylase conserved domain FE384_17770 PF00034 Cytochrome c FE384_17770 PF14376 Haem-binding domain FE384_17770 PF03150 Di-haem cytochrome c peroxidase FE384_17775 PF01204 Trehalase FE384_17780 PF00196 Bacterial regulatory proteins, luxR family FE384_17785 PF03466 LysR substrate binding domain FE384_17785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_17790 PF03631 Virulence factor BrkB FE384_17795 PF00083 Sugar (and other) transporter FE384_17795 PF07690 Major Facilitator Superfamily FE384_17800 PF05170 AsmA family FE384_17805 PF00563 EAL domain FE384_17810 PF00294 pfkB family carbohydrate kinase FE384_17815 PF05193 Peptidase M16 inactive domain FE384_17815 PF00675 Insulinase (Peptidase family M16) FE384_17820 PF00375 Sodium:dicarboxylate symporter family FE384_17825 PF00672 HAMP domain FE384_17825 PF00990 Diguanylate cyclase, GGDEF domain FE384_17825 PF17154 Gammaproteobacterial periplasmic sensor domain FE384_17825 PF00563 EAL domain FE384_17830 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FE384_17835 PF01270 Glycosyl hydrolases family 8 FE384_17840 PF03170 Bacterial cellulose synthase subunit FE384_17845 PF00535 Glycosyl transferase family 2 FE384_17845 PF03552 Cellulose synthase FE384_17845 PF07238 PilZ domain FE384_17850 PF06564 Cellulose biosynthesis protein BcsQ FE384_17855 PF10945 Cellulose biosynthesis protein BcsR FE384_17860 PF10995 Cellulose biosynthesis GIL FE384_17865 PF11120 Cellulose biosynthesis protein BcsF FE384_17870 PF11658 Cellulose biosynthesis protein BcsG FE384_17875 PF13940 Toxin Ldr, type I toxin-antitoxin system FE384_17885 PF03222 Tryptophan/tyrosine permease family FE384_17890 PF00005 ABC transporter FE384_17890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_17895 PF00005 ABC transporter FE384_17895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE384_17900 PF00528 Binding-protein-dependent transport system inner membrane component FE384_17900 PF12911 N-terminal TM domain of oligopeptide transport permease C FE384_17905 PF00528 Binding-protein-dependent transport system inner membrane component FE384_17915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE384_17930 PF08019 Phosphoethanolamine transferase EptA/EptB FE384_17930 PF00884 Sulfatase FE384_17935 PF07690 Major Facilitator Superfamily FE384_17940 PF03797 Autotransporter beta-domain FE384_17945 PF03352 Methyladenine glycosylase FE384_17950 PF00583 Acetyltransferase (GNAT) family FE384_17955 PF01568 Molydopterin dinucleotide binding domain FE384_17955 PF18364 Molybdopterin oxidoreductase N-terminal domain FE384_17955 PF00384 Molybdopterin oxidoreductase FE384_17960 PF00691 OmpA family FE384_17960 PF13488 Glycine zipper FE384_17965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE384_17965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE384_17970 PF11254 Protein of unknown function (DUF3053) FE384_17975 PF01381 Helix-turn-helix FE384_17980 PF00313 'Cold-shock' DNA-binding domain FE384_17985 PF01848 Hok/gef family FE384_17995 PF02092 Glycyl-tRNA synthetase beta subunit FE384_17995 PF05746 DALR anticodon binding domain FE384_18000 PF02091 Glycyl-tRNA synthetase alpha subunit FE384_18005 PF13983 YsaB-like lipoprotein FE384_18010 PF01757 Acyltransferase family FE384_18015 PF05360 yiaA/B two helix domain FE384_18020 PF05360 yiaA/B two helix domain FE384_18025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE384_18025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_18035 PF13407 Periplasmic binding protein domain FE384_18040 PF00005 ABC transporter FE384_18045 PF02653 Branched-chain amino acid transport system / permease component FE384_18050 PF12833 Helix-turn-helix domain FE384_18055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FE384_18060 PF00128 Alpha amylase, catalytic domain FE384_18065 PF00155 Aminotransferase class I and II FE384_18070 PF13247 4Fe-4S dicluster domain FE384_18075 PF09339 IclR helix-turn-helix domain FE384_18075 PF01614 Bacterial transcriptional regulator FE384_18080 PF02615 Malate/L-lactate dehydrogenase FE384_18085 PF04074 YhcH/YjgK/YiaL FE384_18090 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FE384_18100 PF03480 Bacterial extracellular solute-binding protein, family 7 FE384_18105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE384_18105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_18110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FE384_18115 PF01261 Xylose isomerase-like TIM barrel FE384_18120 PF00596 Class II Aldolase and Adducin N-terminal domain FE384_18130 PF06629 MltA-interacting protein MipA FE384_18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_18135 PF03466 LysR substrate binding domain FE384_18140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_18140 PF00529 HlyD membrane-fusion protein of T1SS FE384_18145 PF11742 Protein of unknown function (DUF3302) FE384_18155 PF00171 Aldehyde dehydrogenase family FE384_18160 PF00465 Iron-containing alcohol dehydrogenase FE384_18165 PF09106 Elongation factor SelB, winged helix FE384_18165 PF03144 Elongation factor Tu domain 2 FE384_18165 PF00009 Elongation factor Tu GTP binding domain FE384_18165 PF09107 Elongation factor SelB, winged helix FE384_18170 PF03841 L-seryl-tRNA selenium transferase FE384_18170 PF12390 Selenocysteine synthase N terminal FE384_18175 PF13417 Glutathione S-transferase, N-terminal domain FE384_18175 PF00043 Glutathione S-transferase, C-terminal domain FE384_18180 PF03527 RHS protein FE384_18180 PF15606 Bacterial toxin 34 FE384_18180 PF05593 RHS Repeat FE384_18185 PF03130 PBS lyase HEAT-like repeat FE384_18215 PF15596 Immunity protein 57 FE384_18225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_18225 PF00529 HlyD membrane-fusion protein of T1SS FE384_18230 PF11742 Protein of unknown function (DUF3302) FE384_18235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_18235 PF02378 Phosphotransferase system, EIIC FE384_18235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_18240 PF01232 Mannitol dehydrogenase Rossmann domain FE384_18240 PF08125 Mannitol dehydrogenase C-terminal domain FE384_18245 PF05068 Mannitol repressor FE384_18255 PF10928 Protein of unknown function (DUF2810) FE384_18260 PF02652 L-lactate permease FE384_18265 PF07729 FCD domain FE384_18265 PF00392 Bacterial regulatory proteins, gntR family FE384_18270 PF01070 FMN-dependent dehydrogenase FE384_18275 PF00588 SpoU rRNA Methylase family FE384_18280 PF06426 Serine acetyltransferase, N-terminal FE384_18280 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_18285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FE384_18285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FE384_18290 PF02556 Preprotein translocase subunit SecB FE384_18295 PF00462 Glutaredoxin FE384_18300 PF00581 Rhodanese-like domain FE384_18305 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FE384_18305 PF01676 Metalloenzyme superfamily FE384_18310 PF01551 Peptidase family M23 FE384_18315 PF04748 Divergent polysaccharide deacetylase FE384_18320 PF00535 Glycosyl transferase family 2 FE384_18325 PF00107 Zinc-binding dehydrogenase FE384_18325 PF08240 Alcohol dehydrogenase GroES-like domain FE384_18330 PF00155 Aminotransferase class I and II FE384_18335 PF09612 Bacterial protein of unknown function (HtrL_YibB) FE384_18340 PF01370 NAD dependent epimerase/dehydratase family FE384_18345 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FE384_18350 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FE384_18370 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) FE384_18380 PF01501 Glycosyl transferase family 8 FE384_18380 PF08437 Glycosyl transferase family 8 C-terminal FE384_18385 PF13439 Glycosyltransferase Family 4 FE384_18385 PF00534 Glycosyl transferases group 1 FE384_18400 PF00534 Glycosyl transferases group 1 FE384_18400 PF13439 Glycosyltransferase Family 4 FE384_18405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FE384_18410 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FE384_18415 PF01467 Cytidylyltransferase-like FE384_18420 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FE384_18420 PF06827 Zinc finger found in FPG and IleRS FE384_18420 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FE384_18425 PF00471 Ribosomal protein L33 FE384_18430 PF00830 Ribosomal L28 family FE384_18435 PF04002 RadC-like JAB domain FE384_18440 PF02441 Flavoprotein FE384_18440 PF04127 DNA / pantothenate metabolism flavoprotein FE384_18445 PF00692 dUTPase FE384_18450 PF00440 Bacterial regulatory proteins, tetR family FE384_18455 PF00156 Phosphoribosyl transferase domain FE384_18460 PF01138 3' exoribonuclease family, domain 1 FE384_18460 PF03725 3' exoribonuclease family, domain 2 FE384_18465 PF08340 Domain of unknown function (DUF1732) FE384_18465 PF03755 YicC-like family, N-terminal region FE384_18475 PF03458 UPF0126 domain FE384_18480 PF03120 NAD-dependent DNA ligase OB-fold domain FE384_18480 PF01653 NAD-dependent DNA ligase adenylation domain FE384_18485 PF00625 Guanylate kinase FE384_18490 PF01192 RNA polymerase Rpb6 FE384_18495 PF13291 ACT domain FE384_18495 PF04607 Region found in RelA / SpoT proteins FE384_18495 PF02824 TGS domain FE384_18500 PF00588 SpoU rRNA Methylase family FE384_18500 PF12105 SpoU, rRNA methylase, C-terminal FE384_18505 PF00271 Helicase conserved C-terminal domain FE384_18505 PF17191 RecG wedge domain FE384_18505 PF00270 DEAD/DEAH box helicase FE384_18510 PF03616 Sodium/glutamate symporter FE384_18515 PF00860 Permease family FE384_18520 PF05170 AsmA family FE384_18525 PF01055 Glycosyl hydrolases family 31 FE384_18525 PF13802 Galactose mutarotase-like FE384_18545 PF07690 Major Facilitator Superfamily FE384_18550 PF00892 EamA-like transporter family FE384_18555 PF03180 NLPA lipoprotein FE384_18565 PF07690 Major Facilitator Superfamily FE384_18570 PF06711 Protein of unknown function (DUF1198) FE384_18575 PF00860 Permease family FE384_18580 PF13382 Adenine deaminase C-terminal domain FE384_18580 PF01979 Amidohydrolase family FE384_18585 PF07690 Major Facilitator Superfamily FE384_18590 PF07690 Major Facilitator Superfamily FE384_18595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_18595 PF07730 Histidine kinase FE384_18595 PF05231 MASE1 FE384_18600 PF00072 Response regulator receiver domain FE384_18600 PF00196 Bacterial regulatory proteins, luxR family FE384_18605 PF01842 ACT domain FE384_18610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE384_18610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_18610 PF00205 Thiamine pyrophosphate enzyme, central domain FE384_18615 PF08049 IlvB leader peptide FE384_18620 PF13939 Toxin TisB, type I toxin-antitoxin system FE384_18625 PF07690 Major Facilitator Superfamily FE384_18635 PF02656 Domain of unknown function (DUF202) FE384_18640 PF02656 Domain of unknown function (DUF202) FE384_18650 PF00884 Sulfatase FE384_18650 PF16347 Domain of unknown function (DUF4976) FE384_18655 PF00474 Sodium:solute symporter family FE384_18660 PF02311 AraC-like ligand binding domain FE384_18660 PF12833 Helix-turn-helix domain FE384_18675 PF00392 Bacterial regulatory proteins, gntR family FE384_18675 PF07702 UTRA domain FE384_18680 PF02080 TrkA-C domain FE384_18680 PF06826 Predicted Permease Membrane Region FE384_18685 PF00011 Hsp20/alpha crystallin family FE384_18690 PF00011 Hsp20/alpha crystallin family FE384_18695 PF07119 Protein of unknown function (DUF1375) FE384_18700 PF07676 WD40-like Beta Propeller Repeat FE384_18700 PF12566 Protein of unknown function (DUF3748) FE384_18705 PF01494 FAD binding domain FE384_18710 PF07690 Major Facilitator Superfamily FE384_18715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FE384_18715 PF13378 Enolase C-terminal domain-like FE384_18720 PF01081 KDPG and KHG aldolase FE384_18725 PF05035 2-keto-3-deoxy-galactonokinase FE384_18730 PF00392 Bacterial regulatory proteins, gntR family FE384_18730 PF07729 FCD domain FE384_18745 PF06078 Bacterial protein of unknown function (DUF937) FE384_18750 PF00986 DNA gyrase B subunit, carboxyl terminus FE384_18750 PF01751 Toprim domain FE384_18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_18750 PF18053 DNA gyrase B subunit insert domain FE384_18750 PF00204 DNA gyrase B FE384_18755 PF02463 RecF/RecN/SMC N terminal domain FE384_18760 PF02767 DNA polymerase III beta subunit, central domain FE384_18760 PF00712 DNA polymerase III beta subunit, N-terminal domain FE384_18760 PF02768 DNA polymerase III beta subunit, C-terminal domain FE384_18765 PF11638 DnaA N-terminal domain FE384_18765 PF00308 Bacterial dnaA protein FE384_18765 PF08299 Bacterial dnaA protein helix-turn-helix FE384_18775 PF00468 Ribosomal protein L34 FE384_18780 PF00825 Ribonuclease P FE384_18785 PF01809 Putative membrane protein insertion efficiency factor FE384_18790 PF02096 60Kd inner membrane protein FE384_18790 PF14849 YidC periplasmic domain FE384_18795 PF01926 50S ribosome-binding GTPase FE384_18795 PF12631 MnmE helical domain FE384_18795 PF10396 GTP-binding protein TrmE N-terminus FE384_18800 PF08053 Tryptophanase operon leader peptide FE384_18805 PF01212 Beta-eliminating lyase FE384_18810 PF03222 Tryptophan/tyrosine permease family FE384_18815 PF07690 Major Facilitator Superfamily FE384_18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_18820 PF03466 LysR substrate binding domain FE384_18830 PF03358 NADPH-dependent FMN reductase FE384_18835 PF00860 Permease family FE384_18840 PF13419 Haloacid dehalogenase-like hydrolase FE384_18850 PF03691 Uncharacterised protein family (UPF0167) FE384_18855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FE384_18860 PF00756 Putative esterase FE384_18860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE384_18865 PF11471 Maltoporin periplasmic N-terminal extension FE384_18865 PF02264 LamB porin FE384_18870 PF00232 Glycosyl hydrolase family 1 FE384_18875 PF00367 phosphotransferase system, EIIB FE384_18875 PF02378 Phosphotransferase system, EIIC FE384_18875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FE384_18885 PF01895 PhoU domain FE384_18890 PF00005 ABC transporter FE384_18895 PF00528 Binding-protein-dependent transport system inner membrane component FE384_18900 PF00528 Binding-protein-dependent transport system inner membrane component FE384_18905 PF12849 PBP superfamily domain FE384_18910 PF01380 SIS domain FE384_18915 PF14602 Hexapeptide repeat of succinyl-transferase FE384_18915 PF00132 Bacterial transferase hexapeptide (six repeats) FE384_18915 PF12804 MobA-like NTP transferase domain FE384_18920 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FE384_18920 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FE384_18925 PF02874 ATP synthase alpha/beta family, beta-barrel domain FE384_18925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE384_18930 PF00231 ATP synthase FE384_18935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE384_18935 PF02874 ATP synthase alpha/beta family, beta-barrel domain FE384_18935 PF00306 ATP synthase alpha/beta chain, C terminal domain FE384_18940 PF00213 ATP synthase delta (OSCP) subunit FE384_18945 PF00430 ATP synthase B/B' CF(0) FE384_18950 PF00137 ATP synthase subunit C FE384_18955 PF00119 ATP synthase A chain FE384_18960 PF03899 ATP synthase I chain FE384_18965 PF02527 rRNA small subunit methyltransferase G FE384_18970 PF13932 GidA associated domain FE384_18970 PF01134 Glucose inhibited division protein A FE384_18975 PF00258 Flavodoxin FE384_18980 PF01037 Lrp/AsnC ligand binding domain FE384_18985 PF03590 Aspartate-ammonia ligase FE384_18990 PF05762 VWA domain containing CoxE-like protein FE384_18995 PF17868 AAA lid domain FE384_18995 PF07728 AAA domain (dynein-related subfamily) FE384_18995 PF12592 Protein of unknown function (DUF3763) FE384_19000 PF02705 K+ potassium transporter FE384_19005 PF05025 RbsD / FucU transport protein family FE384_19010 PF00005 ABC transporter FE384_19015 PF02653 Branched-chain amino acid transport system / permease component FE384_19020 PF13407 Periplasmic binding protein domain FE384_19025 PF00294 pfkB family carbohydrate kinase FE384_19030 PF00356 Bacterial regulatory proteins, lacI family FE384_19035 PF07690 Major Facilitator Superfamily FE384_19040 PF07729 FCD domain FE384_19040 PF00392 Bacterial regulatory proteins, gntR family FE384_19075 PF03466 LysR substrate binding domain FE384_19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_19080 PF04219 Protein of unknown function, DUF FE384_19085 PF01078 Magnesium chelatase, subunit ChlI FE384_19085 PF13335 Magnesium chelatase, subunit ChlI C-terminal FE384_19090 PF08046 IlvGEDA operon leader peptide FE384_19100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE384_19100 PF00205 Thiamine pyrophosphate enzyme, central domain FE384_19100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE384_19110 PF01063 Amino-transferase class IV FE384_19115 PF00920 Dehydratase family FE384_19120 PF00585 C-terminal regulatory domain of Threonine dehydratase FE384_19120 PF00291 Pyridoxal-phosphate dependent enzyme FE384_19125 PF03466 LysR substrate binding domain FE384_19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_19130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FE384_19130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FE384_19145 PF13361 UvrD-like helicase C-terminal domain FE384_19145 PF00580 UvrD/REP helicase N-terminal domain FE384_19150 PF02541 Ppx/GppA phosphatase family FE384_19155 PF00271 Helicase conserved C-terminal domain FE384_19155 PF00270 DEAD/DEAH box helicase FE384_19160 PF00085 Thioredoxin FE384_19170 PF07497 Rho termination factor, RNA-binding domain FE384_19170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE384_19170 PF07498 Rho termination factor, N-terminal domain FE384_19175 PF00953 Glycosyl transferase family 4 FE384_19180 PF02706 Chain length determinant protein FE384_19185 PF02350 UDP-N-acetylglucosamine 2-epimerase FE384_19190 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FE384_19190 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FE384_19190 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FE384_19195 PF16363 GDP-mannose 4,6 dehydratase FE384_19200 PF00483 Nucleotidyl transferase FE384_19210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FE384_19215 PF01943 Polysaccharide biosynthesis protein FE384_19220 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FE384_19225 PF06899 WzyE protein, O-antigen assembly polymerase FE384_19230 PF03808 Glycosyl transferase WecB/TagA/CpsF family FE384_19235 PF00324 Amino acid permease FE384_19260 PF04055 Radical SAM superfamily FE384_19260 PF13186 Iron-sulfur cluster-binding domain FE384_19265 PF00884 Sulfatase FE384_19270 PF07219 HemY protein N-terminus FE384_19270 PF07719 Tetratricopeptide repeat FE384_19275 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FE384_19280 PF02602 Uroporphyrinogen-III synthase HemD FE384_19285 PF03900 Porphobilinogen deaminase, C-terminal domain FE384_19285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FE384_19290 PF12633 Adenylate cyclase NT domain FE384_19290 PF01295 Adenylate cyclase, class-I FE384_19295 PF01491 Frataxin-like domain FE384_19305 PF13627 Prokaryotic lipoprotein-attachment site FE384_19310 PF01678 Diaminopimelate epimerase FE384_19315 PF04340 Protein of unknown function, DUF484 FE384_19320 PF00589 Phage integrase family FE384_19320 PF02899 Phage integrase, N-terminal SAM-like domain FE384_19325 PF13419 Haloacid dehalogenase-like hydrolase FE384_19330 PF13361 UvrD-like helicase C-terminal domain FE384_19330 PF00580 UvrD/REP helicase N-terminal domain FE384_19335 PF09992 Phosphodiester glycosidase FE384_19340 PF01544 CorA-like Mg2+ transporter protein FE384_19345 PF10947 Protein of unknown function (DUF2628) FE384_19355 PF00892 EamA-like transporter family FE384_19360 PF03061 Thioesterase superfamily FE384_19365 PF02253 Phospholipase A1 FE384_19370 PF00570 HRDC domain FE384_19370 PF00271 Helicase conserved C-terminal domain FE384_19370 PF09382 RQC domain FE384_19370 PF00270 DEAD/DEAH box helicase FE384_19370 PF16124 RecQ zinc-binding FE384_19375 PF01810 LysE type translocator FE384_19380 PF01810 LysE type translocator FE384_19385 PF12146 Serine aminopeptidase, S33 FE384_19395 PF00892 EamA-like transporter family FE384_19400 PF03466 LysR substrate binding domain FE384_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_19405 PF01717 Cobalamin-independent synthase, Catalytic domain FE384_19405 PF08267 Cobalamin-independent synthase, N-terminal domain FE384_19410 PF01738 Dienelactone hydrolase family FE384_19415 PF01048 Phosphorylase superfamily FE384_19420 PF02646 RmuC family FE384_19425 PF01209 ubiE/COQ5 methyltransferase family FE384_19430 PF02036 SCP-2 sterol transfer family FE384_19435 PF03109 ABC1 family FE384_19440 PF02416 mttA/Hcf106 family FE384_19450 PF00902 Sec-independent protein translocase protein (TatC) FE384_19455 PF01026 TatD related DNase FE384_19460 PF02357 Transcription termination factor nusG FE384_19465 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FE384_19470 PF00175 Oxidoreductase NAD-binding domain FE384_19470 PF00970 Oxidoreductase FAD-binding domain FE384_19475 PF00108 Thiolase, N-terminal domain FE384_19475 PF02803 Thiolase, C-terminal domain FE384_19480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE384_19480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE384_19480 PF00378 Enoyl-CoA hydratase/isomerase FE384_19485 PF00557 Metallopeptidase family M24 FE384_19490 PF09186 Domain of unknown function (DUF1949) FE384_19490 PF01205 Uncharacterized protein family UPF0029 FE384_19495 PF02386 Cation transport protein FE384_19500 PF12724 Flavodoxin domain FE384_19535 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FE384_19540 PF12804 MobA-like NTP transferase domain FE384_19545 PF06288 Protein of unknown function (DUF1040) FE384_19550 PF01636 Phosphotransferase enzyme family FE384_19555 PF01323 DSBA-like thioredoxin domain FE384_19560 PF06097 Bacterial protein of unknown function (DUF945) FE384_19565 PF01553 Acyltransferase FE384_19575 PF00476 DNA polymerase family A FE384_19575 PF01612 3'-5' exonuclease FE384_19575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FE384_19575 PF01367 5'-3' exonuclease, C-terminal SAM fold FE384_19580 PF01926 50S ribosome-binding GTPase FE384_19585 PF04220 Der GTPase activator (YihI) FE384_19590 PF06969 HemN C-terminal domain FE384_19590 PF04055 Radical SAM superfamily FE384_19600 PF02954 Bacterial regulatory protein, Fis family FE384_19600 PF00158 Sigma-54 interaction domain FE384_19600 PF00072 Response regulator receiver domain FE384_19605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_19605 PF00512 His Kinase A (phospho-acceptor) domain FE384_19605 PF00989 PAS fold FE384_19610 PF03951 Glutamine synthetase, beta-Grasp domain FE384_19610 PF00120 Glutamine synthetase, catalytic domain FE384_19620 PF00392 Bacterial regulatory proteins, gntR family FE384_19620 PF07702 UTRA domain FE384_19625 PF01261 Xylose isomerase-like TIM barrel FE384_19630 PF07690 Major Facilitator Superfamily FE384_19635 PF06178 Oligogalacturonate-specific porin protein (KdgM) FE384_19650 PF01055 Glycosyl hydrolases family 31 FE384_19655 PF01263 Aldose 1-epimerase FE384_19665 PF01791 DeoC/LacD family aldolase FE384_19670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE384_19670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE384_19675 PF00294 pfkB family carbohydrate kinase FE384_19680 PF08220 DeoR-like helix-turn-helix domain FE384_19680 PF00455 DeoR C terminal sensor domain FE384_19685 PF13419 Haloacid dehalogenase-like hydrolase FE384_19690 PF03631 Virulence factor BrkB FE384_19695 PF02580 D-Tyr-tRNA(Tyr) deacylase FE384_19700 PF09500 Putative thioesterase (yiiD_Cterm) FE384_19700 PF00583 Acetyltransferase (GNAT) family FE384_19705 PF01402 Ribbon-helix-helix protein, copG family FE384_19715 PF04216 Protein involved in formate dehydrogenase formation FE384_19720 PF01292 Prokaryotic cytochrome b561 FE384_19725 PF09163 Formate dehydrogenase N, transmembrane FE384_19725 PF13247 4Fe-4S dicluster domain FE384_19735 PF02634 FdhD/NarQ family FE384_19740 PF12889 Protein of unknown function (DUF3829) FE384_19745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_19745 PF08279 HTH domain FE384_19750 PF05343 M42 glutamyl aminopeptidase FE384_19755 PF02378 Phosphotransferase system, EIIC FE384_19755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_19760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_19765 PF05336 L-rhamnose mutarotase FE384_19770 PF00596 Class II Aldolase and Adducin N-terminal domain FE384_19775 PF06134 L-rhamnose isomerase (RhaA) FE384_19780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE384_19780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_19785 PF02311 AraC-like ligand binding domain FE384_19785 PF12833 Helix-turn-helix domain FE384_19790 PF02311 AraC-like ligand binding domain FE384_19790 PF12833 Helix-turn-helix domain FE384_19795 PF06379 L-rhamnose-proton symport protein (RhaT) FE384_19800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FE384_19800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FE384_19805 PF03812 2-keto-3-deoxygluconate permease FE384_19810 PF03475 3-alpha domain FE384_19810 PF03473 MOSC domain FE384_19815 PF16527 Two-component sensor protein CpxA, periplasmic domain FE384_19815 PF00672 HAMP domain FE384_19815 PF00512 His Kinase A (phospho-acceptor) domain FE384_19815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_19820 PF00072 Response regulator receiver domain FE384_19820 PF00486 Transcriptional regulatory protein, C terminal FE384_19825 PF07813 LTXXQ motif family protein FE384_19830 PF01545 Cation efflux family FE384_19830 PF16916 Dimerisation domain of Zinc Transporter FE384_19835 PF00365 Phosphofructokinase FE384_19845 PF02611 CDP-diacylglycerol pyrophosphatase FE384_19850 PF00121 Triosephosphate isomerase FE384_19855 PF07305 Protein of unknown function (DUF1454) FE384_19860 PF05656 Protein of unknown function (DUF805) FE384_19865 PF04175 Protein of unknown function (DUF406) FE384_19870 PF00582 Universal stress protein family FE384_19875 PF00970 Oxidoreductase FAD-binding domain FE384_19875 PF00175 Oxidoreductase NAD-binding domain FE384_19880 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FE384_19885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE384_19885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE384_19890 PF00230 Major intrinsic protein FE384_19895 PF06005 Cell division protein ZapB FE384_19900 PF03737 Aldolase/RraA FE384_19905 PF01040 UbiA prenyltransferase family FE384_19910 PF10431 C-terminal, D2-small domain, of ClpB protein FE384_19910 PF00004 ATPase family associated with various cellular activities (AAA) FE384_19910 PF07724 AAA domain (Cdc48 subfamily) FE384_19915 PF00227 Proteasome subunit FE384_19920 PF05036 Sporulation related domain FE384_19925 PF00356 Bacterial regulatory proteins, lacI family FE384_19930 PF00270 DEAD/DEAH box helicase FE384_19930 PF00271 Helicase conserved C-terminal domain FE384_19930 PF17764 3′ DNA-binding domain (3′BD) FE384_19930 PF18074 Primosomal protein N C-terminal domain FE384_19930 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FE384_19935 PF01197 Ribosomal protein L31 FE384_19940 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FE384_19945 PF01340 Met Apo-repressor, MetJ FE384_19950 PF01053 Cys/Met metabolism PLP-dependent enzyme FE384_19955 PF00742 Homoserine dehydrogenase FE384_19955 PF03447 Homoserine dehydrogenase, NAD binding domain FE384_19955 PF00696 Amino acid kinase family FE384_19960 PF02219 Methylenetetrahydrofolate reductase FE384_19965 PF00141 Peroxidase FE384_19970 PF00892 EamA-like transporter family FE384_19975 PF06940 Domain of unknown function (DUF1287) FE384_19980 PF00465 Iron-containing alcohol dehydrogenase FE384_19985 PF00923 Transaldolase/Fructose-6-phosphate aldolase FE384_19990 PF05524 PEP-utilising enzyme, N-terminal FE384_19990 PF00391 PEP-utilising enzyme, mobile domain FE384_19990 PF02896 PEP-utilising enzyme, TIM barrel domain FE384_19990 PF00381 PTS HPr component phosphorylation site FE384_19990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_20000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_20010 PF04055 Radical SAM superfamily FE384_20015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_20020 PF12833 Helix-turn-helix domain FE384_20025 PF00884 Sulfatase FE384_20030 PF00311 Phosphoenolpyruvate carboxylase FE384_20035 PF07687 Peptidase dimerisation domain FE384_20035 PF01546 Peptidase family M20/M25/M40 FE384_20040 PF02774 Semialdehyde dehydrogenase, dimerisation domain FE384_20040 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE384_20045 PF00696 Amino acid kinase family FE384_20050 PF00206 Lyase FE384_20050 PF14698 Argininosuccinate lyase C-terminal FE384_20055 PF03466 LysR substrate binding domain FE384_20055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_20060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE384_20060 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE384_20065 PF00440 Bacterial regulatory proteins, tetR family FE384_20070 PF07226 Protein of unknown function (DUF1422) FE384_20075 PF05958 tRNA (Uracil-5-)-methyltransferase FE384_20080 PF00593 TonB dependent receptor FE384_20080 PF07715 TonB-dependent Receptor Plug Domain FE384_20085 PF01177 Asp/Glu/Hydantoin racemase FE384_20115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FE384_20115 PF01565 FAD binding domain FE384_20120 PF02237 Biotin protein ligase C terminal domain FE384_20120 PF03099 Biotin/lipoate A/B protein ligase family FE384_20120 PF08279 HTH domain FE384_20125 PF00485 Phosphoribulokinase / Uridine kinase family FE384_20150 PF03143 Elongation factor Tu C-terminal domain FE384_20150 PF03144 Elongation factor Tu domain 2 FE384_20150 PF00009 Elongation factor Tu GTP binding domain FE384_20155 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FE384_20160 PF00467 KOW motif FE384_20160 PF02357 Transcription termination factor nusG FE384_20165 PF03946 Ribosomal protein L11, N-terminal domain FE384_20165 PF00298 Ribosomal protein L11, RNA binding domain FE384_20170 PF00687 Ribosomal protein L1p/L10e family FE384_20175 PF00466 Ribosomal protein L10 FE384_20180 PF16320 Ribosomal protein L7/L12 dimerisation domain FE384_20180 PF00542 Ribosomal protein L7/L12 C-terminal domain FE384_20185 PF04563 RNA polymerase beta subunit FE384_20185 PF04565 RNA polymerase Rpb2, domain 3 FE384_20185 PF00562 RNA polymerase Rpb2, domain 6 FE384_20185 PF04561 RNA polymerase Rpb2, domain 2 FE384_20185 PF04560 RNA polymerase Rpb2, domain 7 FE384_20185 PF10385 RNA polymerase beta subunit external 1 domain FE384_20190 PF04997 RNA polymerase Rpb1, domain 1 FE384_20190 PF04983 RNA polymerase Rpb1, domain 3 FE384_20190 PF05000 RNA polymerase Rpb1, domain 4 FE384_20190 PF04998 RNA polymerase Rpb1, domain 5 FE384_20190 PF00623 RNA polymerase Rpb1, domain 2 FE384_20200 PF06968 Biotin and Thiamin Synthesis associated domain FE384_20200 PF04055 Radical SAM superfamily FE384_20205 PF05690 Thiazole biosynthesis protein ThiG FE384_20210 PF02597 ThiS family FE384_20215 PF00899 ThiF family FE384_20220 PF02581 Thiamine monophosphate synthase FE384_20225 PF01964 Radical SAM ThiC family FE384_20225 PF13667 ThiC-associated domain FE384_20230 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FE384_20235 PF09297 NADH pyrophosphatase zinc ribbon domain FE384_20235 PF00293 NUDIX domain FE384_20240 PF01208 Uroporphyrinogen decarboxylase (URO-D) FE384_20245 PF04493 Endonuclease V FE384_20250 PF04222 Protein of unknown function (DUF416) FE384_20255 PF00216 Bacterial DNA-binding protein FE384_20260 PF07356 Protein of unknown function (DUF1481) FE384_20265 PF13801 Heavy-metal resistance FE384_20270 PF00512 His Kinase A (phospho-acceptor) domain FE384_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_20275 PF00158 Sigma-54 interaction domain FE384_20275 PF00072 Response regulator receiver domain FE384_20275 PF02954 Bacterial regulatory protein, Fis family FE384_20280 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FE384_20280 PF02844 Phosphoribosylglycinamide synthetase, N domain FE384_20280 PF02843 Phosphoribosylglycinamide synthetase, C domain FE384_20285 PF01808 AICARFT/IMPCHase bienzyme FE384_20285 PF02142 MGS-like domain FE384_20315 PF13673 Acetyltransferase (GNAT) domain FE384_20320 PF04204 Homoserine O-succinyltransferase FE384_20325 PF01274 Malate synthase FE384_20330 PF00463 Isocitrate lyase family FE384_20335 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FE384_20340 PF07906 ShET2 enterotoxin, N-terminal region FE384_20345 PF01614 Bacterial transcriptional regulator FE384_20345 PF09339 IclR helix-turn-helix domain FE384_20350 PF00809 Pterin binding enzyme FE384_20350 PF02310 B12 binding domain FE384_20350 PF02965 Vitamin B12 dependent methionine synthase, activation domain FE384_20350 PF02607 B12 binding domain FE384_20350 PF02574 Homocysteine S-methyltransferase FE384_20355 PF02690 Na+/Pi-cotransporter FE384_20360 PF03575 Peptidase family S51 FE384_20365 PF01479 S4 domain FE384_20365 PF00849 RNA pseudouridylate synthase FE384_20370 PF11656 YjbD family (DUF3811) FE384_20375 PF01842 ACT domain FE384_20375 PF00696 Amino acid kinase family FE384_20380 PF00342 Phosphoglucose isomerase FE384_20385 PF11106 Exopolysaccharide production protein YjbE FE384_20390 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FE384_20395 PF06251 Capsule biosynthesis GfcC FE384_20400 PF06082 Exopolysaccharide biosynthesis protein YbjH FE384_20405 PF17089 Uncharacterised protein family FE384_20410 PF06146 Phosphate-starvation-inducible E FE384_20415 PF00083 Sugar (and other) transporter FE384_20420 PF00528 Binding-protein-dependent transport system inner membrane component FE384_20425 PF14785 Maltose transport system permease protein MalF P2 domain FE384_20425 PF00528 Binding-protein-dependent transport system inner membrane component FE384_20430 PF01547 Bacterial extracellular solute-binding protein FE384_20435 PF17912 MalK OB fold domain FE384_20435 PF00005 ABC transporter FE384_20440 PF02264 LamB porin FE384_20445 PF07148 Maltose operon periplasmic protein precursor (MalM) FE384_20450 PF13599 Pentapeptide repeats (9 copies) FE384_20450 PF13981 SopA-like central domain FE384_20455 PF04345 Chorismate lyase FE384_20460 PF01040 UbiA prenyltransferase family FE384_20465 PF01553 Acyltransferase FE384_20470 PF01219 Prokaryotic diacylglycerol kinase FE384_20475 PF00717 Peptidase S24-like FE384_20475 PF01726 LexA DNA binding domain FE384_20480 PF01554 MatE FE384_20485 PF05532 CsbD-like FE384_20490 PF01475 Ferric uptake regulator family FE384_20500 PF10897 Protein of unknown function (DUF2713) FE384_20505 PF01207 Dihydrouridine synthase (Dus) FE384_20510 PF09583 Phage shock protein G (Phageshock_PspG) FE384_20515 PF00107 Zinc-binding dehydrogenase FE384_20515 PF08240 Alcohol dehydrogenase GroES-like domain FE384_20520 PF00772 DnaB-like helicase N terminal domain FE384_20520 PF03796 DnaB-like helicase C terminal domain FE384_20525 PF00842 Alanine racemase, C-terminal domain FE384_20525 PF01168 Alanine racemase, N-terminal domain FE384_20530 PF00155 Aminotransferase class I and II FE384_20540 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FE384_20545 PF01894 Uncharacterised protein family UPF0047 FE384_20550 PF04237 YjbR FE384_20555 PF17760 UvrA interaction domain FE384_20555 PF17755 UvrA DNA-binding domain FE384_20555 PF00005 ABC transporter FE384_20560 PF00436 Single-strand binding protein family FE384_20565 PF15940 Family of unknown function FE384_20570 PF00563 EAL domain FE384_20570 PF12792 CSS motif domain associated with EAL FE384_20575 PF12833 Helix-turn-helix domain FE384_20580 PF00376 MerR family regulatory protein FE384_20580 PF09278 MerR, DNA binding FE384_20585 PF00860 Permease family FE384_20590 PF00999 Sodium/hydrogen exchanger family FE384_20595 PF00805 Pentapeptide repeats (8 copies) FE384_20600 PF00474 Sodium:solute symporter family FE384_20605 PF04341 Protein of unknown function, DUF485 FE384_20610 PF13193 AMP-binding enzyme C-terminal domain FE384_20610 PF00501 AMP-binding enzyme FE384_20610 PF16177 Acetyl-coenzyme A synthetase N-terminus FE384_20615 PF02335 Cytochrome c552 FE384_20620 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FE384_20620 PF13435 Cytochrome c554 and c-prime FE384_20625 PF00037 4Fe-4S binding domain FE384_20625 PF13247 4Fe-4S dicluster domain FE384_20630 PF03916 Polysulphide reductase, NrfD FE384_20635 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FE384_20635 PF01578 Cytochrome C assembly protein FE384_20640 PF03918 Cytochrome C biogenesis protein FE384_20650 PF00375 Sodium:dicarboxylate symporter family FE384_20655 PF08238 Sel1 repeat FE384_20665 PF02321 Outer membrane efflux protein FE384_20670 PF04632 Fusaric acid resistance protein family FE384_20675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE384_20675 PF00529 HlyD membrane-fusion protein of T1SS FE384_20680 PF17090 Uncharacterised protein family FE384_20685 PF00753 Metallo-beta-lactamase superfamily FE384_20685 PF14863 Alkyl sulfatase dimerisation FE384_20685 PF14864 Alkyl sulfatase C-terminal FE384_20690 PF00480 ROK family FE384_20695 PF00834 Ribulose-phosphate 3 epimerase family FE384_20700 PF02653 Branched-chain amino acid transport system / permease component FE384_20705 PF00005 ABC transporter FE384_20710 PF13407 Periplasmic binding protein domain FE384_20715 PF01380 SIS domain FE384_20715 PF01418 Helix-turn-helix domain, rpiR family FE384_20720 PF02502 Ribose/Galactose Isomerase FE384_20730 PF12706 Beta-lactamase superfamily domain FE384_20735 PF00583 Acetyltransferase (GNAT) family FE384_20745 PF07969 Amidohydrolase family FE384_20750 PF00005 ABC transporter FE384_20755 PF00005 ABC transporter FE384_20760 PF06007 Phosphonate metabolism protein PhnJ FE384_20765 PF05861 Bacterial phosphonate metabolism protein (PhnI) FE384_20770 PF05845 Bacterial phosphonate metabolism protein (PhnH) FE384_20780 PF00392 Bacterial regulatory proteins, gntR family FE384_20780 PF07702 UTRA domain FE384_20795 PF00005 ABC transporter FE384_20800 PF06983 3-demethylubiquinone-9 3-methyltransferase FE384_20805 PF03831 PhnA domain FE384_20805 PF08274 PhnA Zinc-Ribbon FE384_20810 PF00350 Dynamin family FE384_20815 PF13990 YjcZ-like protein FE384_20820 PF00083 Sugar (and other) transporter FE384_20820 PF08946 Osmosensory transporter coiled coil FE384_20830 PF00512 His Kinase A (phospho-acceptor) domain FE384_20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_20835 PF00486 Transcriptional regulatory protein, C terminal FE384_20835 PF00072 Response regulator receiver domain FE384_20840 PF08019 Phosphoethanolamine transferase EptA/EptB FE384_20840 PF00884 Sulfatase FE384_20845 PF13520 Amino acid permease FE384_20850 PF12833 Helix-turn-helix domain FE384_20855 PF01276 Orn/Lys/Arg decarboxylase, major domain FE384_20855 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FE384_20855 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FE384_20860 PF12833 Helix-turn-helix domain FE384_20865 PF02056 Family 4 glycosyl hydrolase FE384_20865 PF11975 Family 4 glycosyl hydrolase C-terminal domain FE384_20875 PF09997 Predicted membrane protein (DUF2238) FE384_20880 PF05683 Fumarase C-terminus FE384_20880 PF05681 Fumarate hydratase (Fumerase) FE384_20885 PF03605 Anaerobic c4-dicarboxylate membrane transporter FE384_20890 PF00072 Response regulator receiver domain FE384_20895 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FE384_20895 PF17203 Single cache domain 3 FE384_20895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_20895 PF00989 PAS fold FE384_20900 PF06902 Divergent 4Fe-4S mono-cluster FE384_20905 PF14542 GCN5-related N-acetyl-transferase FE384_20910 PF11080 Endoribonuclease GhoS FE384_20915 PF10753 Toxin GhoT_OrtT FE384_20920 PF01336 OB-fold nucleic acid binding domain FE384_20920 PF00152 tRNA synthetases class II (D, K and N) FE384_20925 PF00854 POT family FE384_20935 PF13520 Amino acid permease FE384_20940 PF00486 Transcriptional regulatory protein, C terminal FE384_20940 PF18500 CadC C-terminal domain 1 FE384_20955 PF02683 Cytochrome C biogenesis protein transmembrane region FE384_20955 PF11412 Disulphide bond corrector protein DsbC FE384_20960 PF03091 CutA1 divalent ion tolerance protein FE384_20965 PF03605 Anaerobic c4-dicarboxylate membrane transporter FE384_20970 PF00206 Lyase FE384_20970 PF10415 Fumarase C C-terminus FE384_20975 PF04186 FxsA cytoplasmic membrane protein FE384_20980 PF13520 Amino acid permease FE384_20985 PF00166 Chaperonin 10 Kd subunit FE384_20990 PF00118 TCP-1/cpn60 chaperonin family FE384_20995 PF13698 Domain of unknown function (DUF4156) FE384_21000 PF15922 YjeJ-like FE384_21005 PF04055 Radical SAM superfamily FE384_21010 PF01132 Elongation factor P (EF-P) OB domain FE384_21010 PF09285 Elongation factor P, C-terminal FE384_21010 PF08207 Elongation factor P (EF-P) KOW-like domain FE384_21015 PF08085 Entericidin EcnA/B family FE384_21020 PF08085 Entericidin EcnA/B family FE384_21025 PF00893 Small Multidrug Resistance protein FE384_21030 PF08212 Lipocalin-like domain FE384_21035 PF00144 Beta-lactamase FE384_21040 PF02313 Fumarate reductase subunit D FE384_21045 PF02300 Fumarate reductase subunit C FE384_21050 PF13085 2Fe-2S iron-sulfur cluster binding domain FE384_21050 PF13183 4Fe-4S dicluster domain FE384_21055 PF00890 FAD binding domain FE384_21055 PF02910 Fumarate reductase flavoprotein C-term FE384_21060 PF00152 tRNA synthetases class II (D, K and N) FE384_21065 PF13520 Amino acid permease FE384_21075 PF10840 Protein of unknown function (DUF2645) FE384_21080 PF12794 Mechanosensitive ion channel inner membrane domain 1 FE384_21080 PF12795 Mechanosensitive ion channel porin domain FE384_21080 PF00924 Mechanosensitive ion channel FE384_21085 PF02666 Phosphatidylserine decarboxylase FE384_21090 PF03193 RsgA GTPase FE384_21095 PF00929 Exonuclease FE384_21120 PF08331 Domain of unknown function (DUF1730) FE384_21125 PF03853 YjeF-related protein N-terminus FE384_21125 PF01256 Carbohydrate kinase FE384_21130 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FE384_21135 PF01520 N-acetylmuramoyl-L-alanine amidase FE384_21140 PF01119 DNA mismatch repair protein, C-terminal domain FE384_21140 PF08676 MutL C terminal dimerisation domain FE384_21150 PF17209 Hfq protein FE384_21155 PF16360 GTP-binding GTPase Middle Region FE384_21155 PF13167 GTP-binding GTPase N-terminal FE384_21155 PF01926 50S ribosome-binding GTPase FE384_21160 PF01145 SPFH domain / Band 7 family FE384_21160 PF12221 Bacterial membrane protein N terminal FE384_21165 PF01145 SPFH domain / Band 7 family FE384_21170 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FE384_21175 PF00709 Adenylosuccinate synthetase FE384_21180 PF02082 Transcriptional regulator FE384_21185 PF08461 Ribonuclease R winged-helix domain FE384_21185 PF00575 S1 RNA binding domain FE384_21185 PF17876 Cold shock domain FE384_21185 PF00773 RNB domain FE384_21185 PF08206 Ribonuclease B OB domain FE384_21190 PF00588 SpoU rRNA Methylase family FE384_21190 PF08032 RNA 2'-O ribose methyltransferase substrate binding FE384_21195 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) FE384_21200 PF04012 PspA/IM30 family FE384_21205 PF10679 Protein of unknown function (DUF2491) FE384_21210 PF03994 Domain of Unknown Function (DUF350) FE384_21215 PF06693 Protein of unknown function (DUF1190) FE384_21220 PF03738 Glutathionylspermidine synthase preATP-grasp FE384_21225 PF18158 Adaptive response protein AidB N-terminal domain FE384_21225 PF02770 Acyl-CoA dehydrogenase, middle domain FE384_21225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE384_21230 PF07338 Protein of unknown function (DUF1471) FE384_21235 PF07338 Protein of unknown function (DUF1471) FE384_21240 PF00326 Prolyl oligopeptidase family FE384_21245 PF08220 DeoR-like helix-turn-helix domain FE384_21245 PF00455 DeoR C terminal sensor domain FE384_21255 PF03611 PTS system sugar-specific permease component FE384_21260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_21265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_21270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FE384_21275 PF01261 Xylose isomerase-like TIM barrel FE384_21280 PF00596 Class II Aldolase and Adducin N-terminal domain FE384_21285 PF07338 Protein of unknown function (DUF1471) FE384_21290 PF01250 Ribosomal protein S6 FE384_21295 PF00436 Single-strand binding protein family FE384_21300 PF01084 Ribosomal protein S18 FE384_21305 PF03948 Ribosomal protein L9, C-terminal domain FE384_21305 PF01281 Ribosomal protein L9, N-terminal domain FE384_21310 PF10887 Protein of unknown function (DUF2686) FE384_21320 PF04225 Opacity-associated protein A LysM-like domain FE384_21320 PF08525 Opacity-associated protein A N-terminal motif FE384_21325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FE384_21325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE384_21330 PF00324 Amino acid permease FE384_21335 PF01814 Hemerythrin HHE cation binding domain FE384_21335 PF04405 Domain of Unknown function (DUF542) FE384_21340 PF00892 EamA-like transporter family FE384_21345 PF05368 NmrA-like family FE384_21350 PF01638 HxlR-like helix-turn-helix FE384_21355 PF02872 5'-nucleotidase, C-terminal domain FE384_21355 PF00149 Calcineurin-like phosphoesterase FE384_21360 PF00459 Inositol monophosphatase family FE384_21370 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FE384_21375 PF06526 Protein of unknown function (DUF1107) FE384_21380 PF01595 Cyclin M transmembrane N-terminal domain FE384_21380 PF00571 CBS domain FE384_21380 PF03471 Transporter associated domain FE384_21385 PF01625 Peptide methionine sulfoxide reductase FE384_21390 PF01103 Surface antigen FE384_21390 PF17243 POTRA domain TamA domain 1 FE384_21390 PF07244 Surface antigen variable number repeat FE384_21395 PF04357 TamB, inner membrane protein subunit of TAM complex FE384_21400 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FE384_21405 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FE384_21410 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FE384_21415 PF00719 Inorganic pyrophosphatase FE384_21420 PF13407 Periplasmic binding protein domain FE384_21425 PF00005 ABC transporter FE384_21430 PF02653 Branched-chain amino acid transport system / permease component FE384_21435 PF02653 Branched-chain amino acid transport system / permease component FE384_21440 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FE384_21445 PF01225 Mur ligase family, catalytic domain FE384_21445 PF02875 Mur ligase family, glutamate ligase domain FE384_21445 PF08245 Mur ligase middle domain FE384_21450 PF04751 Protein of unknown function (DUF615) FE384_21455 PF01523 Putative modulator of DNA gyrase FE384_21460 PF07361 Cytochrome b562 FE384_21470 PF13597 Anaerobic ribonucleoside-triphosphate reductase FE384_21470 PF03477 ATP cone domain FE384_21475 PF11941 Domain of unknown function (DUF3459) FE384_21475 PF00128 Alpha amylase, catalytic domain FE384_21480 PF00367 phosphotransferase system, EIIB FE384_21480 PF02378 Phosphotransferase system, EIIC FE384_21485 PF00356 Bacterial regulatory proteins, lacI family FE384_21490 PF17059 MgtA leader peptide FE384_21495 PF00689 Cation transporting ATPase, C-terminus FE384_21495 PF00690 Cation transporter/ATPase, N-terminus FE384_21500 PF01042 Endoribonuclease L-PSP FE384_21505 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FE384_21505 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FE384_21510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE384_21510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE384_21515 PF08052 PyrBI operon leader peptide FE384_21520 PF01042 Endoribonuclease L-PSP FE384_21530 PF00440 Bacterial regulatory proteins, tetR family FE384_21535 PF04074 YhcH/YjgK/YiaL FE384_21545 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE384_21545 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE384_21550 PF06877 Regulator of ribonuclease activity B FE384_21555 PF00583 Acetyltransferase (GNAT) family FE384_21560 PF05987 Bacterial protein of unknown function (DUF898) FE384_21565 PF10458 Valyl tRNA synthetase tRNA binding arm FE384_21565 PF00133 tRNA synthetases class I (I, L, M and V) FE384_21565 PF08264 Anticodon-binding domain of tRNA FE384_21570 PF04364 DNA polymerase III chi subunit, HolC FE384_21575 PF02789 Cytosol aminopeptidase family, N-terminal domain FE384_21575 PF00883 Cytosol aminopeptidase family, catalytic domain FE384_21580 PF03739 Lipopolysaccharide export system permease LptF/LptG FE384_21585 PF03739 Lipopolysaccharide export system permease LptF/LptG FE384_21590 PF05872 Bacterial protein of unknown function (DUF853) FE384_21595 PF00356 Bacterial regulatory proteins, lacI family FE384_21600 PF02447 GntP family permease FE384_21605 PF00106 short chain dehydrogenase FE384_21610 PF08240 Alcohol dehydrogenase GroES-like domain FE384_21610 PF00107 Zinc-binding dehydrogenase FE384_21615 PF01202 Shikimate kinase FE384_21620 PF00107 Zinc-binding dehydrogenase FE384_21620 PF08240 Alcohol dehydrogenase GroES-like domain FE384_21655 PF01609 Transposase DDE domain FE384_21655 PF13006 Insertion element 4 transposase N-terminal FE384_21665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE384_21665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE384_21675 PF16747 Surface-adhesin protein E FE384_21690 PF00665 Integrase core domain FE384_21690 PF13936 Helix-turn-helix domain FE384_21710 PF00005 ABC transporter FE384_21715 PF01032 FecCD transport family FE384_21720 PF01032 FecCD transport family FE384_21725 PF01497 Periplasmic binding protein FE384_21730 PF07715 TonB-dependent Receptor Plug Domain FE384_21730 PF07660 Secretin and TonB N terminus short domain FE384_21730 PF00593 TonB dependent receptor FE384_21735 PF16220 Domain of unknown function (DUF4880) FE384_21735 PF04773 FecR protein FE384_21740 PF04542 Sigma-70 region 2 FE384_21740 PF08281 Sigma-70, region 4 FE384_21750 PF04198 Putative sugar-binding domain FE384_21755 PF02447 GntP family permease FE384_21760 PF00920 Dehydratase family FE384_21765 PF00701 Dihydrodipicolinate synthetase family FE384_21770 PF01614 Bacterial transcriptional regulator FE384_21775 PF00455 DeoR C terminal sensor domain FE384_21775 PF08220 DeoR-like helix-turn-helix domain FE384_21780 PF00834 Ribulose-phosphate 3 epimerase family FE384_21785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE384_21790 PF03437 BtpA family FE384_21795 PF03611 PTS system sugar-specific permease component FE384_21800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE384_21805 PF05343 M42 glutamyl aminopeptidase FE384_21815 PF13847 Methyltransferase domain FE384_21820 PF00583 Acetyltransferase (GNAT) family FE384_21825 PF09857 Putative toxin of bacterial toxin-antitoxin pair FE384_21835 PF13091 PLD-like domain FE384_21835 PF13087 AAA domain FE384_21840 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase FE384_21850 PF06178 Oligogalacturonate-specific porin protein (KdgM) FE384_21855 PF00589 Phage integrase family FE384_21860 PF00589 Phage integrase family FE384_21865 PF00419 Fimbrial protein FE384_21870 PF00419 Fimbrial protein FE384_21875 PF02753 Pili assembly chaperone PapD, C-terminal domain FE384_21875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FE384_21880 PF00577 Outer membrane usher protein FE384_21880 PF13954 PapC N-terminal domain FE384_21880 PF13953 PapC C-terminal domain FE384_21885 PF00419 Fimbrial protein FE384_21895 PF09160 FimH, mannose binding FE384_21895 PF00419 Fimbrial protein FE384_21900 PF02447 GntP family permease FE384_21905 PF03786 D-mannonate dehydratase (UxuA) FE384_21910 PF01232 Mannitol dehydrogenase Rossmann domain FE384_21910 PF08125 Mannitol dehydrogenase C-terminal domain FE384_21915 PF00392 Bacterial regulatory proteins, gntR family FE384_21915 PF07729 FCD domain FE384_21920 PF10887 Protein of unknown function (DUF2686) FE384_21930 PF04965 Gene 25-like lysozyme FE384_21935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE384_21935 PF03466 LysR substrate binding domain FE384_21940 PF01979 Amidohydrolase family FE384_21945 PF07670 Nucleoside recognition FE384_21950 PF07670 Nucleoside recognition FE384_21955 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FE384_21960 PF06779 Uncharacterised MFS-type transporter YbfB FE384_21965 PF06977 SdiA-regulated FE384_21970 PF11823 Protein of unknown function (DUF3343) FE384_21975 PF01869 BadF/BadG/BcrA/BcrD ATPase family FE384_21980 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FE384_21985 PF04286 Protein of unknown function (DUF445) FE384_21990 PF07690 Major Facilitator Superfamily FE384_22000 PF00392 Bacterial regulatory proteins, gntR family FE384_22000 PF00155 Aminotransferase class I and II FE384_22005 PF06568 Domain of unknown function (DUF1127) FE384_22020 PF10117 McrBC 5-methylcytosine restriction system component FE384_22025 PF12102 Domain of unknown function (DUF3578) FE384_22025 PF07728 AAA domain (dynein-related subfamily) FE384_22030 PF08845 Toxin SymE, type I toxin-antitoxin system FE384_22035 PF01420 Type I restriction modification DNA specificity domain FE384_22040 PF02384 N-6 DNA Methylase FE384_22045 PF04851 Type III restriction enzyme, res subunit FE384_22045 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FE384_22045 PF00271 Helicase conserved C-terminal domain FE384_22045 PF08463 EcoEI R protein C-terminal FE384_22050 PF14338 Mrr N-terminal domain FE384_22050 PF04471 Restriction endonuclease FE384_22055 PF07683 Cobalamin synthesis protein cobW C-terminal domain FE384_22055 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE384_22060 PF04328 Selenoprotein, putative FE384_22065 PF13722 5TM C-terminal transporter carbon starvation CstA FE384_22065 PF02554 Carbon starvation protein CstA FE384_22070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE384_22070 PF02203 Tar ligand binding domain homologue FE384_22070 PF00672 HAMP domain FE384_22075 PF07690 Major Facilitator Superfamily FE384_22080 PF00392 Bacterial regulatory proteins, gntR family FE384_22080 PF07729 FCD domain FE384_22085 PF00107 Zinc-binding dehydrogenase FE384_22085 PF08240 Alcohol dehydrogenase GroES-like domain FE384_22090 PF00884 Sulfatase FE384_22095 PF10696 Protein of unknown function (DUF2501) FE384_22100 PF01695 IstB-like ATP binding protein FE384_22105 PF17948 DnaT DNA-binding domain FE384_22110 PF12821 Threonine/Serine exporter, ThrE FE384_22115 PF06738 Putative threonine/serine exporter FE384_22120 PF00196 Bacterial regulatory proteins, luxR family FE384_22125 PF00196 Bacterial regulatory proteins, luxR family FE384_22130 PF11575 FhuF 2Fe-2S C-terminal domain FE384_22130 PF06276 Ferric iron reductase FhuF-like transporter FE384_22135 PF07256 Protein of unknown function (DUF1435) FE384_22155 PF08468 Methyltransferase small domain N-terminal FE384_22155 PF05175 Methyltransferase small domain FE384_22160 PF03603 DNA polymerase III psi subunit FE384_22165 PF00583 Acetyltransferase (GNAT) family FE384_22170 PF13419 Haloacid dehalogenase-like hydrolase FE384_22175 PF16658 Class II release factor RF3, C-terminal domain FE384_22175 PF00009 Elongation factor Tu GTP binding domain FE384_22175 PF03144 Elongation factor Tu domain 2 FE384_22180 PF04972 BON domain FE384_22185 PF07043 Protein of unknown function (DUF1328) FE384_22190 PF01734 Patatin-like phospholipase FE384_22195 PF01026 TatD related DNase FE384_22200 PF04055 Radical SAM superfamily FE384_22205 PF11230 Protein of unknown function (DUF3029) FE384_22210 PF01791 DeoC/LacD family aldolase FE384_22215 PF02885 Glycosyl transferase family, helical bundle domain FE384_22215 PF00591 Glycosyl transferase family, a/b domain FE384_22215 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FE384_22220 PF01676 Metalloenzyme superfamily FE384_22225 PF01048 Phosphorylase superfamily FE384_22230 PF07804 HipA-like C-terminal domain FE384_22235 PF10437 Bacterial lipoate protein ligase C-terminus FE384_22235 PF03099 Biotin/lipoate A/B protein ligase family FE384_22240 PF10144 Bacterial virulence factor haemolysin FE384_22245 PF18429 Domain of unknown function (DUF5609) FE384_22250 PF18073 Rubredoxin metal binding domain FE384_22255 PF13521 AAA domain FE384_22255 PF01381 Helix-turn-helix FE384_22260 PF12848 ABC transporter FE384_22260 PF00005 ABC transporter FE384_22265 PF14718 Soluble lytic murein transglycosylase L domain FE384_22265 PF01464 Transglycosylase SLT domain FE384_22270 PF01371 Trp repressor protein FE384_22275 PF01931 Protein of unknown function DUF84 FE384_22280 PF00300 Histidine phosphatase superfamily (branch 1) FE384_22285 PF06445 GyrI-like small molecule binding domain FE384_22285 PF12833 Helix-turn-helix domain FE384_22290 PF05981 CreA protein FE384_22295 PF00072 Response regulator receiver domain FE384_22295 PF00486 Transcriptional regulatory protein, C terminal FE384_22300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE384_22300 PF00512 His Kinase A (phospho-acceptor) domain FE384_22300 PF00672 HAMP domain FE384_22305 PF06123 Inner membrane protein CreD FE384_22310 PF00486 Transcriptional regulatory protein, C terminal FE384_22310 PF00072 Response regulator receiver domain FE384_22320 PF00588 SpoU rRNA Methylase family