locus-tag	class	description
FE384_00010	COG0527	aspartate kinase activity
FE384_00010	COG0460	homoserine dehydrogenase
FE384_00020	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FE384_00035	COG1115	amino acid carrier protein
FE384_00045	COG0521	Mo-molybdopterin cofactor biosynthetic process
FE384_00050	COG1584	GPR1 FUN34 yaaH family protein
FE384_00055	COG4735	regulation of single-species biofilm formation
FE384_00075	COG3385	transposase activity
FE384_00085	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FE384_00090	COG0583	DNA-binding transcription factor activity
FE384_00110	COG0196	riboflavin kinase activity
FE384_00125	COG1047	Peptidyl-prolyl cis-trans
FE384_00145	COG0505	Belongs to the CarA family
FE384_00150	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FE384_00200	COG0644	oxidoreductase
FE384_00205	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FE384_00210	COG2271	Major facilitator Superfamily
FE384_00225	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FE384_00250	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FE384_00255	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FE384_00260	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FE384_00265	COG1357	PFAM Pentapeptide repeats (8 copies)
FE384_00275	COG0564	pseudouridine synthase activity
FE384_00285	COG0417	DNA replication proofreading
FE384_00290	COG0235	Class ii aldolase
FE384_00295	COG2160	L-arabinose isomerase activity
FE384_00300	COG1069	ribulokinase activity
FE384_00305	COG4977	sequence-specific DNA binding
FE384_00310	COG0586	Pfam SNARE associated Golgi protein
FE384_00315	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FE384_00320	COG1178	ABC-type Fe3 transport system permease component
FE384_00325	COG4143	(ABC) transporter
FE384_00330	COG4533	DNA binding
FE384_00340	COG2814	Major facilitator Superfamily
FE384_00355	COG0473	3-isopropylmalate dehydrogenase activity
FE384_00370	COG0583	DNA-binding transcription factor activity
FE384_00380	COG0028	Belongs to the TPP enzyme family
FE384_00385	COG0440	acetolactate synthase activity
FE384_00395	COG1609	Transcriptional regulator
FE384_00400	COG2001	Belongs to the MraZ family
FE384_00410	COG3116	cell division
FE384_00415	COG0768	penicillin binding
FE384_00420	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FE384_00425	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FE384_00435	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FE384_00440	COG0772	Belongs to the SEDS family
FE384_00455	COG1181	Belongs to the D-alanine--D-alanine ligase family
FE384_00460	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FE384_00465	COG0849	cell division
FE384_00470	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FE384_00490	COG0494	nUDIX hydrolase
FE384_00505	COG0237	dephospho-CoA kinase activity
FE384_00515	COG1459	type II secretion system
FE384_00520	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FE384_00525	COG4969	Belongs to the N-Me-Phe pilin family
FE384_00530	COG0157	Belongs to the NadC ModD family
FE384_00535	COG3023	N-Acetylmuramoyl-L-alanine amidase
FE384_00540	COG3725	Membrane protein required for beta-lactamase induction
FE384_00545	COG1113	amino acid transport
FE384_00550	COG2186	Transcriptional regulator
FE384_00555	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FE384_00560	COG0508	dehydrogenase complex catalyzes the overall conversion of
FE384_00565	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FE384_00570	COG3064	Membrane
FE384_00575	COG1049	propionate catabolic process, 2-methylcitrate cycle
FE384_00600	COG2132	Multicopper oxidase
FE384_00605	COG4993	Dehydrogenase
FE384_00610	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FE384_00615	COG0288	reversible hydration of carbon dioxide
FE384_00620	COG1131	(ABC) transporter
FE384_00625	COG0842	Transport permease protein
FE384_00630	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_00635	COG0726	polysaccharide deacetylase
FE384_00645	COG5464	transposase or invertase
FE384_00660	COG3539	Fimbrial protein
FE384_00665	COG3539	Fimbrial protein
FE384_00670	COG3539	Fimbrial protein
FE384_00675	COG3539	Fimbrial protein
FE384_00680	COG3188	usher protein
FE384_00685	COG3121	Chaperone
FE384_00690	COG3539	Fimbrial protein
FE384_00695	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FE384_00700	COG0617	tRNA 3'-terminal CCA addition
FE384_00710	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FE384_00720	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FE384_00725	COG1643	Atp-dependent helicase
FE384_00730	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FE384_00735	COG4774	siderophore transport
FE384_00740	COG1120	ATPase activity
FE384_00745	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FE384_00750	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FE384_00775	COG2860	membrane
FE384_00780	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FE384_00795	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FE384_00800	COG3835	regulator
FE384_00815	COG1408	metallophosphoesterase
FE384_00830	COG0024	Methionine aminopeptidase
FE384_00855	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FE384_00860	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FE384_00865	COG0575	Belongs to the CDS family
FE384_00870	COG0750	zinc metalloprotease
FE384_00880	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FE384_00885	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FE384_00910	COG0587	DNA-directed DNA polymerase activity
FE384_00925	COG0346	lactoylglutathione lyase activity
FE384_00930	COG0037	tRNA processing
FE384_00935	COG4568	rho-dependent transcription termination
FE384_00945	COG4681	YaeQ
FE384_00950	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FE384_00955	COG3015	lipoprotein NlpE involved in copper resistance
FE384_00960	COG0791	NLP P60 protein
FE384_00970	COG1720	tRNA m6t6A37 methyltransferase activity
FE384_00980	COG1464	Belongs to the NlpA lipoprotein family
FE384_00985	COG2011	ABC-type metal ion transport system permease component
FE384_00990	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FE384_00995	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FE384_01030	COG0656	L-ascorbic acid biosynthetic process
FE384_01035	COG0583	DNA-binding transcription factor activity
FE384_01045	COG2226	methyltransferase
FE384_01050	COG1388	LysM domain
FE384_01050	COG0741	lytic transglycosylase activity
FE384_01055	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FE384_01060	COG2226	methyltransferase
FE384_01070	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FE384_01100	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FE384_01110	COG1960	acyl-CoA dehydrogenase activity
FE384_01120	COG0121	glutamine amidotransferase
FE384_01125	COG3034	peptidoglycan biosynthetic process
FE384_01130	COG3041	Addiction module toxin RelE StbE family
FE384_01135	COG3077	Addiction module antitoxin, RelB DinJ family
FE384_01140	COG0791	NLP P60 protein
FE384_01145	COG1943	Transposase
FE384_01165	COG2161	toxin-antitoxin pair type II binding
FE384_01175	COG0454	-acetyltransferase
FE384_01180	COG1690	Belongs to the RtcB family
FE384_01185	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FE384_01190	COG2195	Cleaves the N-terminal amino acid of tripeptides
FE384_01220	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FE384_01255	COG2003	Belongs to the UPF0758 family
FE384_01275	COG2378	regulation of single-species biofilm formation
FE384_01295	COG3596	GTP binding
FE384_01300	COG0583	DNA-binding transcription factor activity
FE384_01315	COG2826	transposase and inactivated derivatives, IS30 family
FE384_01335	COG3039	Transposase
FE384_01340	COG0833	amino acid
FE384_01345	COG2040	homocysteine
FE384_01350	COG3842	ATPase activity
FE384_01370	COG1061	Type III restriction enzyme res subunit
FE384_01380	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FE384_01400	COG0582	viral genome integration into host DNA
FE384_01410	COG0583	DNA-binding transcription factor activity
FE384_01415	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FE384_01420	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FE384_01425	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FE384_01430	COG2080	2 iron, 2 sulfur cluster binding
FE384_01435	COG3477	response to acidic pH
FE384_01455	COG3188	usher protein
FE384_01485	COG0254	rRNA binding
FE384_01500	COG1388	LysM domain
FE384_01520	COG3059	membrane
FE384_01530	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FE384_01535	COG2207	Transcriptional regulator
FE384_01540	COG0247	lactate metabolic process
FE384_01545	COG1139	Iron-sulfur cluster binding protein
FE384_01550	COG1556	Lactate utilization protein
FE384_01575	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FE384_01585	COG2200	EAL domain
FE384_01585	COG2771	luxR family
FE384_01590	COG0583	DNA-binding transcription factor activity
FE384_01600	COG0666	response to abiotic stimulus
FE384_01610	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FE384_01615	COG1304	FMN binding
FE384_01625	COG0549	Belongs to the carbamate kinase family
FE384_01630	COG0402	S-adenosylhomocysteine deaminase activity
FE384_01635	COG1064	alcohol dehydrogenase
FE384_01650	COG1280	lysine exporter protein (LysE YggA)
FE384_01660	COG3829	transcription factor binding
FE384_01665	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FE384_01670	COG0372	Belongs to the citrate synthase family
FE384_01675	COG2079	MmgE PrpD family protein
FE384_01680	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FE384_01685	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FE384_01690	COG0402	S-adenosylhomocysteine deaminase activity
FE384_01695	COG0583	DNA-binding transcription factor activity
FE384_01700	COG0288	reversible hydration of carbon dioxide
FE384_01710	COG2807	transmembrane transport
FE384_01715	COG0110	maltose O-acetyltransferase activity
FE384_01720	COG2223	nitrite transmembrane transporter activity
FE384_01725	COG3250	beta-galactosidase activity
FE384_01730	COG1609	Transcriptional regulator
FE384_01735	COG1414	Transcriptional regulator
FE384_01745	COG3384	dioxygenase
FE384_01755	COG3971	2-oxopent-4-enoate hydratase activity
FE384_01770	COG2814	Major facilitator Superfamily
FE384_01775	COG3122	Protein conserved in bacteria
FE384_01815	COG1215	transferase activity, transferring glycosyl groups
FE384_01825	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FE384_01830	COG4521	taurine ABC transporter
FE384_01835	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FE384_01840	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FE384_01845	COG2175	clavaminate synthase activity
FE384_01850	COG0113	porphobilinogen synthase activity
FE384_01855	COG3468	outer membrane autotransporter barrel domain protein
FE384_01870	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FE384_01875	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FE384_01880	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FE384_01900	COG1181	Belongs to the D-alanine--D-alanine ligase family
FE384_01910	COG1785	Belongs to the alkaline phosphatase family
FE384_01920	COG3706	GGDEF domain
FE384_01925	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FE384_01945	COG4126	flavin adenine dinucleotide binding
FE384_01970	COG1940	carbohydrate kinase activity
FE384_01975	COG2814	Major facilitator Superfamily
FE384_01980	COG0419	ATPase involved in DNA repair
FE384_01985	COG0420	3'-5' exonuclease activity
FE384_01990	COG0745	RESPONSE REGULATOR receiver
FE384_01995	COG5002	protein histidine kinase activity
FE384_02000	COG1114	Component of the transport system for branched-chain amino acids
FE384_02005	COG1113	amino acid transport
FE384_02010	COG0366	Alpha amylase catalytic
FE384_02030	COG1862	Preprotein translocase
FE384_02035	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FE384_02040	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FE384_02045	COG1403	HNH endonuclease
FE384_02050	COG3248	Nucleoside-binding outer membrane protein
FE384_02055	COG4238	major outer membrane lipoprotein
FE384_02065	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FE384_02065	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FE384_02080	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FE384_02085	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FE384_02090	COG0667	Aldo Keto reductase
FE384_02100	COG0142	geranyltranstransferase activity
FE384_02115	COG0693	protein deglycase activity
FE384_02120	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FE384_02130	COG2814	Major facilitator Superfamily
FE384_02140	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FE384_02145	COG1845	cytochrome c oxidase, subunit III
FE384_02150	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FE384_02155	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FE384_02160	COG2223	nitrite transmembrane transporter activity
FE384_02165	COG3056	Lipoprotein
FE384_02170	COG0271	Belongs to the BolA IbaG family
FE384_02190	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FE384_02195	COG0776	regulation of translation
FE384_02200	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FE384_02205	COG1555	photosystem II stabilization
FE384_02210	COG0824	Thioesterase
FE384_02220	COG4533	DNA binding
FE384_02230	COG1522	sequence-specific DNA binding
FE384_02235	COG1132	(ABC) transporter
FE384_02240	COG1132	(ABC) transporter
FE384_02245	COG0347	Belongs to the P(II) protein family
FE384_02250	COG0004	ammonium transporteR
FE384_02255	COG1946	Acyl-CoA thioesterase
FE384_02260	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FE384_02265	COG3695	enzyme binding
FE384_02275	COG5507	3-demethylubiquinone-9 3-methyltransferase
FE384_02280	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FE384_02290	COG0110	maltose O-acetyltransferase activity
FE384_02305	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FE384_02310	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FE384_02315	COG1309	transcriptional regulator
FE384_02320	COG1196	nuclear chromosome segregation
FE384_02320	COG3264	Mechanosensitive ion channel
FE384_02330	COG3923	Primosomal replication protein n
FE384_02335	COG2832	Protein of unknown function (DUF454)
FE384_02345	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FE384_02360	COG0326	Molecular chaperone. Has ATPase activity
FE384_02385	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_02390	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FE384_02390	COG4651	solute:proton antiporter activity
FE384_02395	COG2223	nitrite transmembrane transporter activity
FE384_02400	COG0737	Belongs to the 5'-nucleotidase family
FE384_02405	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FE384_02410	COG3735	TraB family
FE384_02420	COG3093	addiction module antidote protein HigA
FE384_02425	COG2217	Heavy metal translocating P-type atpase
FE384_02430	COG2066	Belongs to the glutaminase family
FE384_02435	COG0531	amino acid
FE384_02440	COG0789	Transcriptional regulator
FE384_02445	COG1585	Membrane protein implicated in regulation of membrane protease activity
FE384_02450	COG0330	HflC and HflK could
FE384_02455	COG4619	ABC transporter
FE384_02460	COG0390	transport system, permease component
FE384_02465	COG3118	belongs to the thioredoxin family
FE384_02470	COG0300	oxidoreductase activity
FE384_02475	COG2755	lipolytic protein G-D-S-L family
FE384_02480	COG4181	ATPase activity
FE384_02485	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FE384_02490	COG3209	COG3209 Rhs family protein
FE384_02520	COG0583	DNA-binding transcription factor activity
FE384_02530	COG1414	Transcriptional regulator
FE384_02535	COG3960	tartronate-semialdehyde synthase activity
FE384_02540	COG3622	Belongs to the hyi family
FE384_02545	COG2084	Dehydrogenase
FE384_02550	COG1953	Uracil, thiamine, allantoin
FE384_02560	COG2233	PERMEase
FE384_02565	COG1929	Belongs to the glycerate kinase type-1 family
FE384_02570	COG3257	ureidoglycine aminohydrolase activity
FE384_02575	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FE384_02580	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FE384_02585	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FE384_02590	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FE384_02600	COG0549	Belongs to the carbamate kinase family
FE384_02605	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FE384_02610	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FE384_02620	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FE384_02630	COG1988	membrane-bound metal-dependent
FE384_02635	COG2501	S4 domain
FE384_02645	COG3539	Fimbrial protein
FE384_02650	COG3121	Chaperone
FE384_02655	COG3188	usher protein
FE384_02660	COG3539	Fimbrial protein
FE384_02665	COG3539	Fimbrial protein
FE384_02670	COG2197	response regulator
FE384_02680	COG0582	viral genome integration into host DNA
FE384_02710	COG2076	Multidrug Resistance protein
FE384_02720	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FE384_02725	COG1881	PFAM PEBP family protein
FE384_02730	COG2207	Transcriptional regulator
FE384_02775	COG3039	Transposase
FE384_02790	COG3772	lysozyme
FE384_02805	COG5562	phage envelope protein
FE384_02820	COG4220	transposase activity
FE384_02835	COG0500	methyltransferase
FE384_02845	COG2207	Transcriptional regulator
FE384_02850	COG4571	Outer membrane protease
FE384_02855	COG2207	Transcriptional regulator
FE384_02865	COG4783	chaperone-mediated protein folding
FE384_02870	COG1215	transferase activity, transferring glycosyl groups
FE384_02875	COG5002	protein histidine kinase activity
FE384_02880	COG0745	RESPONSE REGULATOR receiver
FE384_02885	COG1538	Outer membrane efflux protein
FE384_02890	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FE384_02895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FE384_02900	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FE384_02905	COG1113	amino acid transport
FE384_02910	COG0668	transmembrane transport
FE384_02915	COG0778	Nitroreductase
FE384_02920	COG2315	Protein conserved in bacteria
FE384_02945	COG3385	transposase activity
FE384_02950	COG2977	Belongs to the P-Pant transferase superfamily
FE384_02955	COG4771	TonB-dependent receptor
FE384_02960	COG2382	esterase
FE384_02965	COG3251	PFAM MbtH domain protein
FE384_02970	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FE384_02970	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FE384_02975	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FE384_02980	COG1120	ATPase activity
FE384_02985	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FE384_02990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FE384_03000	COG4592	Periplasmic binding protein
FE384_03005	COG1169	isochorismate synthase
FE384_03010	COG1021	2,3-dihydroxybenzoate-AMP ligase
FE384_03015	COG3433	isochorismatase activity
FE384_03015	COG1535	isochorismatase
FE384_03020	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_03025	COG2050	protein possibly involved in aromatic compounds catabolism
FE384_03030	COG1966	Carbon starvation protein
FE384_03035	COG2879	small protein
FE384_03040	COG0371	Dehydrogenase
FE384_03045	COG0436	Aminotransferase
FE384_03050	COG1475	DNA binding
FE384_03055	COG3969	phosphoadenosine phosphosulfate
FE384_03060	COG0583	DNA-binding transcription factor activity
FE384_03065	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FE384_03070	COG0450	alkyl hydroperoxide reductase
FE384_03075	COG3634	alkyl hydroperoxide reductase activity
FE384_03080	COG0589	response to stress
FE384_03085	COG1063	alcohol dehydrogenase
FE384_03090	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FE384_03095	COG3719	Belongs to the RNase T2 family
FE384_03100	COG0471	metal ion transport
FE384_03115	COG3051	citrate lyase alpha subunit
FE384_03120	COG2301	Belongs to the HpcH HpaI aldolase family
FE384_03130	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FE384_03135	COG3290	protein histidine kinase activity
FE384_03140	COG4565	transcriptional regulatory protein
FE384_03145	COG3069	C4-dicarboxylate transmembrane transporter activity
FE384_03155	COG1278	Cold shock
FE384_03170	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FE384_03180	COG0583	DNA-binding transcription factor activity
FE384_03195	COG1686	Belongs to the peptidase S11 family
FE384_03200	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FE384_03205	COG0772	Belongs to the SEDS family
FE384_03210	COG0768	penicillin binding
FE384_03220	COG0799	negative regulation of ribosome biogenesis
FE384_03225	COG0406	alpha-ribazole phosphatase activity
FE384_03235	COG1466	dna polymerase III delta subunit
FE384_03250	COG2888	peptidyl-tyrosine sulfation
FE384_03255	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FE384_03265	COG2214	Heat shock protein DnaJ domain protein
FE384_03270	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FE384_03280	COG2214	Heat shock protein DnaJ domain protein
FE384_03285	COG0443	Heat shock 70 kDa protein
FE384_03295	COG1126	abc transporter atp-binding protein
FE384_03300	COG0765	amino acid transport
FE384_03305	COG0765	amino acid transport
FE384_03310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FE384_03315	COG3039	Transposase
FE384_03320	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FE384_03325	COG4535	Mg2 and Co2 transporter CorC
FE384_03335	COG1702	phosphate starvation-inducible protein PhoH
FE384_03345	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FE384_03380	COG0367	asparagine synthase
FE384_03385	COG0647	UMP catabolic process
FE384_03390	COG1846	Transcriptional regulator
FE384_03390	COG1940	carbohydrate kinase activity
FE384_03395	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FE384_03405	COG2190	(PTS) system
FE384_03405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_03405	COG1263	PTS System
FE384_03425	COG0735	belongs to the Fur family
FE384_03435	COG0716	FMN binding
FE384_03445	COG0596	Alpha beta hydrolase
FE384_03450	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FE384_03455	COG0033	Phosphoglucomutase
FE384_03475	COG0531	amino acid
FE384_03480	COG1982	Orn Lys Arg decarboxylase major
FE384_03490	COG0745	RESPONSE REGULATOR receiver
FE384_03495	COG2205	protein histidine kinase activity
FE384_03525	COG3209	COG3209 Rhs family protein
FE384_03560	COG3272	Protein of unknown function (DUF1722)
FE384_03565	COG0415	Belongs to the DNA photolyase family
FE384_03570	COG3104	oligopeptide transport
FE384_03575	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FE384_03580	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FE384_03585	COG1984	allophanate hydrolase subunit 2
FE384_03600	COG3180	Ammonia monooxygenase
FE384_03605	COG3539	Fimbrial protein
FE384_03610	COG3121	Chaperone
FE384_03615	COG3188	usher protein
FE384_03620	COG3539	Fimbrial protein
FE384_03625	COG0372	Belongs to the citrate synthase family
FE384_03635	COG2009	succinate dehydrogenase
FE384_03640	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FE384_03645	COG1053	succinate dehydrogenase
FE384_03650	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FE384_03655	COG0567	Dehydrogenase, E1 component
FE384_03660	COG0508	dehydrogenase complex catalyzes the overall conversion of
FE384_03670	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FE384_03675	COG2188	Transcriptional regulator
FE384_03680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_03680	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_03680	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_03685	COG0383	alpha-mannosidase activity
FE384_03690	COG1271	oxidase subunit
FE384_03695	COG1294	oxidase, subunit
FE384_03700	COG4890	Cyd operon protein YbgT
FE384_03705	COG3790	cyd operon protein YbgE
FE384_03710	COG0824	Thioesterase
FE384_03715	COG0811	peptide transport
FE384_03720	COG0848	biopolymer transport protein
FE384_03725	COG3064	Membrane
FE384_03735	COG2885	chlorophyll binding
FE384_03740	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FE384_03790	COG3201	nicotinamide mononucleotide transporter
FE384_03795	COG1230	cation diffusion facilitator family transporter
FE384_03805	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FE384_03815	COG2017	converts alpha-aldose to the beta-anomer
FE384_03825	COG1085	galactose-1-phosphate uridylyltransferase
FE384_03830	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FE384_03835	COG1119	ATPase activity
FE384_03840	COG3585	molybdate ion transport
FE384_03840	COG2005	Transcriptional regulator
FE384_03850	COG0725	ABC transporter, periplasmic molybdate-binding protein
FE384_03855	COG4149	molybdate abc transporter
FE384_03860	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FE384_03865	COG0561	phosphatase activity
FE384_03875	COG0583	DNA-binding transcription factor activity
FE384_03880	COG2828	Protein conserved in bacteria
FE384_03885	COG0471	metal ion transport
FE384_03890	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FE384_03895	COG4677	pectinesterase activity
FE384_03900	COG1881	PFAM PEBP family protein
FE384_03905	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FE384_03920	COG2226	methyltransferase
FE384_03925	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FE384_03935	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FE384_03945	COG0521	Mo-molybdopterin cofactor biosynthetic process
FE384_03955	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FE384_03960	COG0314	molybdopterin synthase activity
FE384_03965	COG0670	Belongs to the BI1 family
FE384_03970	COG0670	Belongs to the BI1 family
FE384_03975	COG0392	lysyltransferase activity
FE384_03980	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FE384_03985	COG3568	Endonuclease Exonuclease Phosphatase
FE384_03995	COG0842	Transport permease protein
FE384_04000	COG0842	Transport permease protein
FE384_04005	COG1131	(ABC) transporter
FE384_04015	COG1309	transcriptional regulator
FE384_04020	COG0513	Belongs to the DEAD box helicase family
FE384_04025	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
FE384_04030	COG1199	ATP-dependent helicase activity
FE384_04035	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FE384_04040	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FE384_04050	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FE384_04060	COG4774	siderophore transport
FE384_04075	COG0668	transmembrane transport
FE384_04080	COG1126	abc transporter atp-binding protein
FE384_04085	COG0765	amino acid transport
FE384_04090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FE384_04100	COG5006	permease, DMT superfamily
FE384_04110	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FE384_04115	COG2194	sulfuric ester hydrolase activity
FE384_04125	COG1321	iron dependent repressor
FE384_04130	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FE384_04135	COG1376	ErfK ybiS ycfS ynhG family protein
FE384_04140	COG0488	(ABC) transporter
FE384_04150	COG0561	phosphatase activity
FE384_04160	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FE384_04165	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FE384_04170	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FE384_04175	COG0303	'Molybdopterin
FE384_04180	COG1446	asparaginase
FE384_04185	COG4172	Belongs to the ABC transporter superfamily
FE384_04190	COG0747	negative chemotaxis
FE384_04200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FE384_04205	COG2200	EAL domain
FE384_04210	COG2199	diguanylate cyclase activity
FE384_04225	COG2133	pyrroloquinoline quinone binding
FE384_04230	COG0625	glutathione transferase activity
FE384_04235	COG1686	Belongs to the peptidase S11 family
FE384_04240	COG1349	DNA-binding transcription factor activity
FE384_04245	COG0671	phosphoesterase, PA-phosphatase related
FE384_04250	COG2814	Major facilitator Superfamily
FE384_04260	COG0561	phosphatase activity
FE384_04265	COG0738	Major facilitator superfamily
FE384_04270	COG3226	Transcriptional regulator
FE384_04285	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FE384_04295	COG0778	Nitroreductase
FE384_04310	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FE384_04315	COG3842	ATPase activity
FE384_04320	COG1176	ABC-type spermidine putrescine transport system, permease component I
FE384_04325	COG1177	transmembrane transport
FE384_04340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FE384_04345	COG4160	amino acid transport
FE384_04350	COG4215	(ABC) transporter
FE384_04355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FE384_04360	COG1126	abc transporter atp-binding protein
FE384_04375	COG3023	N-Acetylmuramoyl-L-alanine amidase
FE384_04380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FE384_04385	COG0702	epimerase
FE384_04390	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FE384_04395	COG0028	Belongs to the TPP enzyme family
FE384_04400	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FE384_04410	COG2431	L-lysine efflux transmembrane transporter activity
FE384_04415	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FE384_04420	COG3593	DNA synthesis involved in DNA repair
FE384_04425	COG2990	Protein conserved in bacteria
FE384_04430	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FE384_04435	COG0577	efflux transmembrane transporter activity
FE384_04435	COG1136	(ABC) transporter
FE384_04440	COG1278	Cold shock
FE384_04450	COG0542	response to heat
FE384_04475	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FE384_04480	COG4988	ABC transporter
FE384_04485	COG0492	ferredoxin-NADP+ reductase activity
FE384_04490	COG1522	sequence-specific DNA binding
FE384_04495	COG1178	ABC-type Fe3 transport system permease component
FE384_04495	COG1674	ftsk spoiiie
FE384_04505	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FE384_04515	COG0243	molybdopterin cofactor binding
FE384_04520	COG0437	4 iron, 4 sulfur cluster binding
FE384_04525	COG3302	dmso reductase anchor subunit
FE384_04530	COG1335	isochorismatase
FE384_04540	COG0531	amino acid
FE384_04545	COG0583	DNA-binding transcription factor activity
FE384_04550	COG2249	NAD(P)H dehydrogenase (quinone) activity
FE384_04555	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FE384_04560	COG1882	Formate acetyltransferase
FE384_04565	COG2116	formate transmembrane transporter activity
FE384_04570	COG1944	ATP diphosphatase activity
FE384_04575	COG2323	membrane
FE384_04590	COG0501	Belongs to the peptidase M48B family
FE384_04600	COG0539	negative regulation of cytoplasmic translation
FE384_04610	COG0658	competence protein
FE384_04610	COG2333	competence protein COMEC
FE384_04615	COG1132	(ABC) transporter
FE384_04620	COG1663	tetraacyldisaccharide 4'-kinase activity
FE384_04625	COG3214	Protein conserved in bacteria
FE384_04640	COG3173	Aminoglycoside phosphotransferase
FE384_04645	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FE384_04650	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FE384_04660	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FE384_04670	COG2989	Protein conserved in bacteria
FE384_04675	COG3108	Peptidase M15
FE384_04680	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FE384_04685	COG1448	Aminotransferase
FE384_04690	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FE384_04705	COG0308	aminopeptidase N
FE384_04710	COG1116	anion transmembrane transporter activity
FE384_04715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FE384_04725	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FE384_04730	COG0431	NADPH-dependent FMN reductase
FE384_04735	COG3539	Fimbrial protein
FE384_04740	COG3121	Chaperone
FE384_04745	COG3188	usher protein
FE384_04750	COG3539	Fimbrial protein
FE384_04755	COG3539	Fimbrial protein
FE384_04760	COG3539	Fimbrial protein
FE384_04765	COG3121	Chaperone
FE384_04780	COG0633	Ferredoxin
FE384_04780	COG3217	Mosc domain protein beta barrel domain protein
FE384_04790	COG0488	(ABC) transporter
FE384_04795	COG2995	paraquat-inducible protein a
FE384_04800	COG3008	intermembrane lipid transfer
FE384_04800	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FE384_04805	COG3009	Protein conserved in bacteria
FE384_04810	COG3130	regulation of translation
FE384_04820	COG1067	ATP-dependent peptidase activity
FE384_04830	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FE384_04830	COG2885	chlorophyll binding
FE384_04840	COG3070	regulator of competence-specific genes
FE384_04845	COG1289	transmembrane transporter activity
FE384_04850	COG3304	Inner membrane component domain
FE384_04855	COG0210	DNA helicase
FE384_04870	COG1832	CoA-binding protein
FE384_04885	COG1254	Belongs to the acylphosphatase family
FE384_04890	COG2920	part of a sulfur-relay system
FE384_04895	COG0670	Belongs to the BI1 family
FE384_04905	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FE384_04910	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FE384_04915	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
FE384_04920	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FE384_04925	COG1999	signal sequence binding
FE384_04930	COG1773	rubredoxin
FE384_04935	COG1271	oxidase subunit
FE384_04940	COG1294	oxidase, subunit
FE384_04955	COG0489	protein tyrosine kinase activity
FE384_04955	COG3206	protein involved in exopolysaccharide biosynthesis
FE384_04960	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FE384_04965	COG1596	polysaccharide export
FE384_04970	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FE384_04995	COG1278	Cold shock
FE384_05000	COG1278	Cold shock
FE384_05020	COG0348	domain, Protein
FE384_05025	COG2205	protein histidine kinase activity
FE384_05025	COG2198	Histidine kinase
FE384_05025	COG0784	Response regulator, receiver
FE384_05030	COG1879	ABC-type sugar transport system periplasmic component
FE384_05035	COG0745	RESPONSE REGULATOR receiver
FE384_05040	COG3005	denitrification pathway
FE384_05045	COG0243	molybdopterin cofactor binding
FE384_05050	COG3381	protein complex oligomerization
FE384_05085	COG3729	General stress protein
FE384_05090	COG2233	PERMEase
FE384_05105	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FE384_05130	COG1309	transcriptional regulator
FE384_05135	COG0506	proline dehydrogenase activity
FE384_05135	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FE384_05135	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FE384_05145	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FE384_05155	COG2822	iron ion transport
FE384_05160	COG2837	iron assimilation
FE384_05165	COG1702	phosphate starvation-inducible protein PhoH
FE384_05170	COG3658	cytochrome
FE384_05175	COG1215	transferase activity, transferring glycosyl groups
FE384_05180	COG1649	PFAM Uncharacterised BCR, COG1649
FE384_05180	COG0726	polysaccharide deacetylase
FE384_05185	COG0457	Tetratricopeptide repeat
FE384_05190	COG3706	GGDEF domain
FE384_05235	COG3381	protein complex oligomerization
FE384_05260	COG2197	response regulator
FE384_05285	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FE384_05305	COG2943	transferase activity, transferring hexosyl groups
FE384_05310	COG5645	(Lipo)protein
FE384_05325	COG1560	Kdo2-lipid A biosynthetic process
FE384_05335	COG2353	YceI-like domain
FE384_05340	COG3038	cytochrome b561
FE384_05375	COG2999	glutathione oxidoreductase activity
FE384_05385	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FE384_05395	COG0673	inositol 2-dehydrogenase activity
FE384_05400	COG0728	peptidoglycan biosynthetic process
FE384_05405	COG3418	PFAM FlgN family protein
FE384_05410	COG2747	anti-sigma28 factor FlgM
FE384_05415	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FE384_05420	COG1815	bacterial-type flagellum-dependent cell motility
FE384_05425	COG1558	bacterial-type flagellum-dependent cell motility
FE384_05430	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FE384_05435	COG1749	Flagellar hook protein flgE
FE384_05440	COG4787	bacterial-type flagellum-dependent cell motility
FE384_05445	COG4786	Flagellar basal body rod
FE384_05460	COG1705	Flagellar rod assembly protein muramidase FlgJ
FE384_05460	COG3951	Flagellar rod assembly protein muramidase FlgJ
FE384_05465	COG1256	bacterial-type flagellum assembly
FE384_05470	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FE384_05475	COG1530	ribonuclease E activity
FE384_05480	COG0564	pseudouridine synthase activity
FE384_05490	COG1399	metal-binding, possibly nucleic acid-binding protein
FE384_05510	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FE384_05515	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_05525	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FE384_05530	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FE384_05535	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FE384_05545	COG0470	DNA polymerase III
FE384_05550	COG0084	hydrolase, TatD family'
FE384_05555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_05555	COG1263	PTS System
FE384_05560	COG4773	Receptor
FE384_05565	COG0537	adenosine 5'-monophosphoramidase activity
FE384_05570	COG5633	Lipoprotein
FE384_05575	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FE384_05595	COG1252	NADH dehydrogenase
FE384_05600	COG3134	Outer membrane lipoprotein
FE384_05605	COG1309	transcriptional regulator
FE384_05615	COG1376	ErfK ybiS ycfS ynhG family protein
FE384_05615	COG1388	LysM domain
FE384_05620	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FE384_05625	COG4763	Acyl-transferase
FE384_05630	COG4591	ABC-type transport system involved in lipoprotein release permease component
FE384_05635	COG1136	(ABC) transporter
FE384_05640	COG4591	ABC-type transport system involved in lipoprotein release permease component
FE384_05650	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FE384_05655	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FE384_05670	COG1177	transmembrane transport
FE384_05675	COG1176	ABC-type spermidine putrescine transport system, permease component I
FE384_05680	COG3842	ATPase activity
FE384_05690	COG2850	peptidyl-arginine hydroxylation
FE384_05695	COG2205	protein histidine kinase activity
FE384_05700	COG0745	RESPONSE REGULATOR receiver
FE384_05705	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FE384_05725	COG1187	pseudouridine synthase activity
FE384_05730	COG0538	isocitrate dehydrogenase activity
FE384_05735	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FE384_05750	COG0582	viral genome integration into host DNA
FE384_05775	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FE384_05780	COG4197	protein conserved in bacteria, prophage-related
FE384_05795	COG4626	Terminase
FE384_05795	COG1802	Transcriptional regulator
FE384_05805	COG4695	Portal protein
FE384_05810	COG3299	homolog of phage Mu protein gp47
FE384_05815	COG3778	Protein conserved in bacteria
FE384_05830	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FE384_05840	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FE384_05845	COG1403	HNH endonuclease
FE384_05850	COG0538	isocitrate dehydrogenase activity
FE384_05865	COG5562	phage envelope protein
FE384_05870	COG0789	Transcriptional regulator
FE384_05875	COG2200	EAL domain
FE384_05900	COG2200	EAL domain
FE384_05955	COG2894	cell division
FE384_05980	COG0179	Fumarylacetoacetate (FAA) hydrolase
FE384_05995	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FE384_06000	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FE384_06005	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FE384_06020	COG2719	SpoVR family
FE384_06030	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FE384_06040	COG1619	proteins homologs of microcin C7 resistance protein MccF
FE384_06050	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FE384_06055	COG2261	transglycosylase associated protein
FE384_06070	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FE384_06070	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FE384_06070	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_06075	COG1461	Dihydroxyacetone kinase
FE384_06080	COG2376	Dihydroxyacetone kinase
FE384_06085	COG3284	Transcriptional regulator
FE384_06090	COG3468	outer membrane autotransporter barrel domain protein
FE384_06095	COG0012	GTP binding
FE384_06110	COG0659	secondary active sulfate transmembrane transporter activity
FE384_06115	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FE384_06120	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FE384_06130	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FE384_06140	COG2890	protein-(glutamine-N5) methyltransferase activity
FE384_06145	COG3094	Invasion gene expression up-regulator, SirB
FE384_06150	COG2912	Transglutaminase-like superfamily
FE384_06190	COG0387	Pfam Sodium calcium exchanger
FE384_06195	COG4572	Cation transport regulator
FE384_06200	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FE384_06205	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FE384_06210	COG4932	domain protein
FE384_06215	COG2197	response regulator
FE384_06220	COG3850	Histidine kinase
FE384_06225	COG2223	nitrite transmembrane transporter activity
FE384_06230	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FE384_06235	COG1140	nitrate reductase beta subunit
FE384_06240	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FE384_06245	COG2181	nitrate reductase activity
FE384_06280	COG0788	formyltetrahydrofolate deformylase activity
FE384_06290	COG1752	Esterase of the alpha-beta hydrolase superfamily
FE384_06295	COG0745	RESPONSE REGULATOR receiver
FE384_06300	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FE384_06305	COG2916	Histone family protein nucleoid-structuring protein H-NS
FE384_06310	COG1435	thymidine kinase activity
FE384_06320	COG1012	belongs to the aldehyde dehydrogenase family
FE384_06320	COG1454	alcohol dehydrogenase
FE384_06325	COG2095	MarC family integral membrane protein
FE384_06330	COG3039	Transposase
FE384_06335	COG4166	transmembrane transport
FE384_06340	COG0601	transmembrane transport
FE384_06345	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FE384_06350	COG0444	Belongs to the ABC transporter superfamily
FE384_06355	COG4608	Belongs to the ABC transporter superfamily
FE384_06375	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FE384_06380	COG2350	Protein conserved in bacteria
FE384_06385	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FE384_06390	COG1607	acyl-coa hydrolase
FE384_06410	COG3047	cAMP biosynthetic process
FE384_06415	COG3685	Protein conserved in bacteria
FE384_06420	COG3685	Protein conserved in bacteria
FE384_06425	COG3729	General stress protein
FE384_06440	COG0135	phosphoribosylanthranilate isomerase activity
FE384_06440	COG0134	indole-3-glycerol-phosphate synthase activity
FE384_06445	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FE384_06445	COG0512	Glutamine amidotransferase of anthranilate synthase
FE384_06450	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FE384_06460	COG0613	PHP domain protein
FE384_06465	COG0009	L-threonylcarbamoyladenylate synthase
FE384_06470	COG4907	membrane protein (DUF2207)
FE384_06475	COG1187	pseudouridine synthase activity
FE384_06480	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FE384_06485	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_06490	COG0616	signal peptide processing
FE384_06500	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FE384_06505	COG0583	DNA-binding transcription factor activity
FE384_06525	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FE384_06535	COG0671	phosphoesterase, PA-phosphatase related
FE384_06540	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FE384_06545	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FE384_06555	COG0023	Translation Initiation Factor
FE384_06565	COG1349	DNA-binding transcription factor activity
FE384_06575	COG5001	Diguanylate cyclase
FE384_06590	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FE384_06590	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FE384_06595	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FE384_06600	COG2852	Protein conserved in bacteria
FE384_06605	COG4172	Belongs to the ABC transporter superfamily
FE384_06610	COG4172	Belongs to the ABC transporter superfamily
FE384_06615	COG4171	peptide transport system, permease
FE384_06620	COG4168	peptide transport system, permease
FE384_06625	COG4166	transmembrane transport
FE384_06635	COG0531	amino acid
FE384_06645	COG0174	glutamine synthetase
FE384_06650	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FE384_06655	COG1396	sequence-specific DNA binding
FE384_06655	COG1917	Cupin 2, conserved barrel domain protein
FE384_06660	COG1012	belongs to the aldehyde dehydrogenase family
FE384_06665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FE384_06670	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FE384_06675	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FE384_06680	COG1842	Phage shock protein A
FE384_06690	COG1983	PspC domain protein
FE384_06700	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FE384_06705	COG0366	Alpha amylase catalytic
FE384_06710	COG1653	transport
FE384_06715	COG1175	transmembrane transport
FE384_06720	COG0395	ABC-type sugar transport system, permease component
FE384_06725	COG1063	alcohol dehydrogenase
FE384_06730	COG1082	Xylose isomerase domain protein TIM barrel
FE384_06735	COG0673	inositol 2-dehydrogenase activity
FE384_06740	COG1554	hydrolase, family 65, central catalytic
FE384_06745	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FE384_06760	COG1609	Transcriptional regulator
FE384_06765	COG3106	COG3106 Predicted ATPase
FE384_06775	COG3283	Transcriptional regulator of aromatic amino acids metabolism
FE384_06780	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FE384_06785	COG4948	Mandelate Racemase Muconate Lactonizing
FE384_06790	COG2866	Carboxypeptidase
FE384_06805	COG1073	alpha beta
FE384_06810	COG0583	DNA-binding transcription factor activity
FE384_06815	COG4166	transmembrane transport
FE384_06820	COG0668	transmembrane transport
FE384_06825	COG3039	Transposase
FE384_06830	COG3182	Iron-regulated membrane protein
FE384_06835	COG0589	response to stress
FE384_06840	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FE384_06845	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FE384_06850	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FE384_06855	COG1473	amidohydrolase
FE384_06860	COG1473	amidohydrolase
FE384_06865	COG0583	DNA-binding transcription factor activity
FE384_06870	COG2840	Smr protein MutS2
FE384_06875	COG3706	GGDEF domain
FE384_06885	COG0513	Belongs to the DEAD box helicase family
FE384_06895	COG0582	viral genome integration into host DNA
FE384_06915	COG3723	Recombinational DNA repair protein, rece pathway
FE384_06920	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FE384_06960	COG4197	protein conserved in bacteria, prophage-related
FE384_06970	COG3756	Protein conserved in bacteria
FE384_06975	COG1484	DNA-dependent DNA replication
FE384_06980	COG1846	Transcriptional regulator
FE384_06990	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FE384_06995	COG1475	DNA binding
FE384_07020	COG3039	Transposase
FE384_07030	COG5301	cellulose 1,4-beta-cellobiosidase activity
FE384_07035	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FE384_07040	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FE384_07055	COG0589	response to stress
FE384_07060	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FE384_07065	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FE384_07065	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FE384_07065	COG1013	pyruvate-flavodoxin oxidoreductase activity
FE384_07065	COG0674	pyruvate-flavodoxin oxidoreductase activity
FE384_07070	COG3042	response to heat
FE384_07075	COG3187	Heat shock protein
FE384_07080	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FE384_07085	COG2911	Protein conserved in bacteria
FE384_07095	COG3784	Protein of unknown function (DUF1318)
FE384_07100	COG2207	Transcriptional regulator
FE384_07105	COG1012	belongs to the aldehyde dehydrogenase family
FE384_07110	COG3733	amine oxidase
FE384_07115	COG2030	dehydratase
FE384_07115	COG1012	belongs to the aldehyde dehydrogenase family
FE384_07120	COG3396	Phenylacetate-CoA oxygenase
FE384_07125	COG3460	Phenylacetate-CoA oxygenase
FE384_07130	COG3396	Phenylacetate-CoA oxygenase
FE384_07135	COG2151	metal-sulfur cluster biosynthetic enzyme
FE384_07140	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FE384_07145	COG1024	Enoyl-CoA hydratase
FE384_07150	COG1024	Enoyl-CoA hydratase
FE384_07155	COG1250	3-hydroxyacyl-CoA dehydrogenase
FE384_07160	COG2050	protein possibly involved in aromatic compounds catabolism
FE384_07165	COG0183	Belongs to the thiolase family
FE384_07170	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
FE384_07175	COG3327	negative regulation of DNA-templated transcription, initiation
FE384_07180	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FE384_07200	COG2826	transposase and inactivated derivatives, IS30 family
FE384_07215	COG0667	Aldo Keto reductase
FE384_07225	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FE384_07230	COG4589	Belongs to the CDS family
FE384_07235	COG2267	carboxylic ester hydrolase activity
FE384_07240	COG0671	phosphoesterase, PA-phosphatase related
FE384_07240	COG2453	phosphatase
FE384_07250	COG1643	Atp-dependent helicase
FE384_07255	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FE384_07260	COG1012	belongs to the aldehyde dehydrogenase family
FE384_07270	COG3038	cytochrome b561
FE384_07285	COG0840	transmembrane signaling receptor activity
FE384_07290	COG0583	DNA-binding transcription factor activity
FE384_07295	COG5383	Protein conserved in bacteria
FE384_07305	COG2841	Protein conserved in bacteria
FE384_07310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FE384_07315	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FE384_07320	COG1275	C4-dicarboxylate transporter malic acid transport protein
FE384_07325	COG0500	methyltransferase
FE384_07340	COG0675	Transposase, IS605 OrfB family
FE384_07345	COG3135	benzoate transporter
FE384_07350	COG1396	sequence-specific DNA binding
FE384_07355	COG0826	peptidase U32
FE384_07365	COG1724	mRNA binding
FE384_07370	COG1598	PFAM Uncharacterised protein family UPF0150
FE384_07375	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FE384_07380	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FE384_07385	COG3842	ATPase activity
FE384_07390	COG1176	ABC-type spermidine putrescine transport system, permease component I
FE384_07395	COG1177	transmembrane transport
FE384_07420	COG3238	Protein conserved in bacteria
FE384_07425	COG1247	-acetyltransferase
FE384_07430	COG2130	NADP-dependent
FE384_07435	COG1802	Transcriptional regulator
FE384_07440	COG4772	TonB-dependent receptor
FE384_07445	COG3391	amine dehydrogenase activity
FE384_07450	COG1113	amino acid transport
FE384_07455	COG0625	glutathione transferase activity
FE384_07470	COG3209	COG3209 Rhs family protein
FE384_07490	COG5433	transposase activity
FE384_07500	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FE384_07505	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FE384_07510	COG0384	phenazine biosynthesis protein PhzF
FE384_07515	COG2181	nitrate reductase activity
FE384_07520	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FE384_07525	COG1140	nitrate reductase beta subunit
FE384_07530	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FE384_07535	COG2223	nitrite transmembrane transporter activity
FE384_07540	COG4886	Leucine-rich repeat (LRR) protein
FE384_07545	COG4886	Leucine-rich repeat (LRR) protein
FE384_07550	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FE384_07555	COG0697	spore germination
FE384_07565	COG0437	4 iron, 4 sulfur cluster binding
FE384_07570	COG2864	formate dehydrogenase
FE384_07575	COG3093	addiction module antidote protein HigA
FE384_07580	COG1064	alcohol dehydrogenase
FE384_07600	COG1764	response to oxidative stress
FE384_07605	COG4608	Belongs to the ABC transporter superfamily
FE384_07610	COG0444	Belongs to the ABC transporter superfamily
FE384_07615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FE384_07620	COG0601	transmembrane transport
FE384_07625	COG0747	negative chemotaxis
FE384_07630	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
FE384_07635	COG2200	EAL domain
FE384_07635	COG2202	Pas domain
FE384_07635	COG2199	diguanylate cyclase activity
FE384_07640	COG3706	GGDEF domain
FE384_07650	COG0531	amino acid
FE384_07655	COG0076	glutamate decarboxylase activity
FE384_07660	COG0612	Peptidase, M16
FE384_07665	COG4771	TonB-dependent receptor
FE384_07670	COG4178	(ABC) transporter
FE384_07680	COG0641	radical SAM
FE384_07685	COG3119	arylsulfatase activity
FE384_07690	COG2207	Transcriptional regulator
FE384_07700	COG0243	molybdopterin cofactor binding
FE384_07705	COG3539	Fimbrial protein
FE384_07710	COG3539	Fimbrial protein
FE384_07715	COG3539	Fimbrial protein
FE384_07730	COG3550	peptidyl-serine autophosphorylation
FE384_07735	COG1396	sequence-specific DNA binding
FE384_07785	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FE384_07795	COG3781	membrane
FE384_07800	COG0246	Mannitol dehydrogenase
FE384_07805	COG2199	diguanylate cyclase activity
FE384_07815	COG2066	Belongs to the glutaminase family
FE384_07820	COG1012	belongs to the aldehyde dehydrogenase family
FE384_07825	COG0583	DNA-binding transcription factor activity
FE384_07845	COG1846	Transcriptional regulator
FE384_07850	COG4977	sequence-specific DNA binding
FE384_07860	COG0697	spore germination
FE384_07865	COG2814	Major facilitator Superfamily
FE384_07875	COG3706	GGDEF domain
FE384_07880	COG3111	PFAM Bacterial OB fold (BOF) protein
FE384_07885	COG1546	Belongs to the CinA family
FE384_07890	COG0339	signal peptide processing
FE384_07895	COG4221	oxidoreductase activity
FE384_07900	COG1802	Transcriptional regulator
FE384_07910	COG0246	Mannitol dehydrogenase
FE384_07915	COG0477	Major facilitator Superfamily
FE384_07925	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FE384_07930	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FE384_07935	COG5301	cellulose 1,4-beta-cellobiosidase activity
FE384_07940	COG4220	transposase activity
FE384_07950	COG5562	phage envelope protein
FE384_07975	COG1278	Cold shock
FE384_07985	COG3772	lysozyme
FE384_08000	COG1278	Cold shock
FE384_08005	COG1278	Cold shock
FE384_08015	COG0484	heat shock protein binding
FE384_08020	COG1403	HNH endonuclease
FE384_08040	COG2026	Addiction module toxin, RelE StbE family
FE384_08045	COG3077	Addiction module antitoxin, RelB DinJ family
FE384_08060	COG2801	Transposase and inactivated derivatives
FE384_08075	COG1396	sequence-specific DNA binding
FE384_08125	COG1063	alcohol dehydrogenase
FE384_08130	COG4948	Mandelate Racemase Muconate Lactonizing
FE384_08145	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FE384_08160	COG0243	molybdopterin cofactor binding
FE384_08165	COG0243	molybdopterin cofactor binding
FE384_08170	COG0437	4 iron, 4 sulfur cluster binding
FE384_08175	COG3302	dmso reductase anchor subunit
FE384_08180	COG3381	protein complex oligomerization
FE384_08190	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FE384_08195	COG1940	carbohydrate kinase activity
FE384_08200	COG0583	DNA-binding transcription factor activity
FE384_08205	COG2814	Major facilitator Superfamily
FE384_08220	COG3591	Belongs to the peptidase S1B family
FE384_08240	COG0628	permease
FE384_08245	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FE384_08250	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FE384_08260	COG0531	amino acid
FE384_08265	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_08270	COG3136	membrane protein required for alginate biosynthesis
FE384_08275	COG0745	RESPONSE REGULATOR receiver
FE384_08280	COG2205	protein histidine kinase activity
FE384_08290	COG0114	fumarate hydratase activity
FE384_08295	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FE384_08295	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FE384_08300	COG1482	cell wall glycoprotein biosynthetic process
FE384_08305	COG5339	Protein conserved in bacteria
FE384_08315	COG2211	Major facilitator Superfamily
FE384_08320	COG3250	beta-galactosidase activity
FE384_08325	COG1309	transcriptional regulator
FE384_08330	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_08335	COG1609	Transcriptional regulator
FE384_08340	COG1263	PTS System
FE384_08340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_08345	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FE384_08355	COG0673	inositol 2-dehydrogenase activity
FE384_08395	COG4659	FMN binding
FE384_08405	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FE384_08410	COG3104	oligopeptide transport
FE384_08415	COG0625	glutathione transferase activity
FE384_08420	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FE384_08435	COG3895	Periplasmic Protein
FE384_08445	COG3133	Outer membrane lipoprotein
FE384_08460	COG1566	PFAM secretion protein HlyD family protein
FE384_08465	COG1289	transmembrane transporter activity
FE384_08470	COG2032	superoxide dismutase activity
FE384_08475	COG4989	oxidoreductase activity
FE384_08480	COG3313	Fe-S protein
FE384_08485	COG1309	transcriptional regulator
FE384_08490	COG1902	pentaerythritol trinitrate reductase activity
FE384_08495	COG0346	lactoylglutathione lyase activity
FE384_08500	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FE384_08505	COG1201	RNA secondary structure unwinding
FE384_08510	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FE384_08515	COG0791	NLP P60 protein
FE384_08520	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FE384_08525	COG2814	Major facilitator Superfamily
FE384_08540	COG0583	DNA-binding transcription factor activity
FE384_08545	COG2814	Major facilitator Superfamily
FE384_08550	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FE384_08555	COG0307	riboflavin synthase, alpha
FE384_08565	COG3468	outer membrane autotransporter barrel domain protein
FE384_08585	COG4529	Protein conserved in bacteria
FE384_08595	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FE384_08600	COG0437	4 iron, 4 sulfur cluster binding
FE384_08610	COG2414	aldehyde ferredoxin oxidoreductase
FE384_08615	COG0437	4 iron, 4 sulfur cluster binding
FE384_08625	COG0469	pyruvate kinase activity
FE384_08630	COG4238	major outer membrane lipoprotein
FE384_08635	COG1376	ErfK ybiS ycfS ynhG family protein
FE384_08650	COG0719	Fe-S assembly protein
FE384_08655	COG0396	ATPase activity
FE384_08660	COG0719	Fe-S assembly protein
FE384_08665	COG0316	Belongs to the HesB IscA family
FE384_08675	COG2050	protein possibly involved in aromatic compounds catabolism
FE384_08680	COG0277	FAD linked oxidase domain protein
FE384_08680	COG0247	lactate metabolic process
FE384_08685	COG0628	permease
FE384_08700	COG0738	Major facilitator superfamily
FE384_08705	COG2271	Major facilitator Superfamily
FE384_08720	COG4670	ketone body catabolic process
FE384_08725	COG1960	acyl-CoA dehydrogenase activity
FE384_08730	COG1917	Cupin 2, conserved barrel domain protein
FE384_08730	COG2207	Transcriptional regulator
FE384_08735	COG2086	electron transfer activity
FE384_08740	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FE384_08745	COG0644	oxidoreductase
FE384_08750	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FE384_08755	COG0318	PFAM AMP-dependent synthetase and ligase
FE384_08760	COG0574	Belongs to the PEP-utilizing enzyme family
FE384_08760	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FE384_08770	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FE384_08775	COG4256	Hemin uptake protein
FE384_08785	COG2200	EAL domain
FE384_08790	COG0791	NLP P60 protein
FE384_08800	COG0386	Belongs to the glutathione peroxidase family
FE384_08815	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FE384_08815	COG0072	phenylalanine-tRNA ligase activity
FE384_08860	COG3137	Salt-induced outer membrane protein
FE384_08865	COG1105	Belongs to the carbohydrate kinase PfkB family
FE384_08885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FE384_08890	COG1988	membrane-bound metal-dependent
FE384_08910	COG0753	catalase activity
FE384_08920	COG1486	melibiose metabolic process
FE384_08925	COG1917	Cupin 2, conserved barrel domain protein
FE384_08925	COG2169	Transcriptional regulator
FE384_08930	COG1447	Phosphotransferase system cellobiose-specific component IIA
FE384_08935	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FE384_08940	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FE384_08945	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FE384_08955	COG0322	excinuclease ABC activity
FE384_08965	COG3678	ATP-independent chaperone mediated protein folding
FE384_08985	COG3138	arginine N-succinyltransferase
FE384_08995	COG0708	Exodeoxyribonuclease III
FE384_09000	COG0398	Pfam SNARE associated Golgi protein
FE384_09010	COG0398	Pfam SNARE associated Golgi protein
FE384_09015	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FE384_09020	COG4134	Bacterial extracellular solute-binding protein
FE384_09025	COG4135	transport system, permease component
FE384_09030	COG4136	ATPase activity
FE384_09035	COG2897	thiosulfate sulfurtransferase activity
FE384_09040	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FE384_09045	COG0494	nUDIX hydrolase
FE384_09055	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FE384_09065	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FE384_09075	COG0778	Nitroreductase
FE384_09080	COG0616	signal peptide processing
FE384_09085	COG0252	asparaginase activity
FE384_09090	COG1335	isochorismatase
FE384_09095	COG2814	Major facilitator Superfamily
FE384_09100	COG1349	DNA-binding transcription factor activity
FE384_09105	COG0667	Aldo Keto reductase
FE384_09110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_09115	COG0191	fructose-bisphosphate aldolase activity
FE384_09120	COG1063	alcohol dehydrogenase
FE384_09125	COG2271	Major facilitator Superfamily
FE384_09130	COG1063	alcohol dehydrogenase
FE384_09135	COG3139	Protein of unknown function (DUF1315)
FE384_09145	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FE384_09150	COG0676	glucose-6-phosphate 1-epimerase activity
FE384_09155	COG0656	L-ascorbic acid biosynthetic process
FE384_09160	COG3713	MltA-interacting MipA family protein
FE384_09165	COG2766	serine protein kinase
FE384_09175	COG2199	diguanylate cyclase activity
FE384_09180	COG2199	diguanylate cyclase activity
FE384_09185	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FE384_09200	COG2207	Transcriptional regulator
FE384_09205	COG2807	transmembrane transport
FE384_09210	COG3189	MarR family transcriptional regulator
FE384_09215	COG3042	response to heat
FE384_09220	COG2199	diguanylate cyclase activity
FE384_09220	COG2203	Gaf domain
FE384_09235	COG2261	transglycosylase associated protein
FE384_09245	COG3615	Tellurite resistance protein tehB
FE384_09255	COG0583	DNA-binding transcription factor activity
FE384_09260	COG0473	3-isopropylmalate dehydrogenase activity
FE384_09265	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FE384_09270	COG4638	Rieske (2fe-2S)
FE384_09275	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FE384_09280	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FE384_09285	COG0318	PFAM AMP-dependent synthetase and ligase
FE384_09290	COG3065	identical protein binding
FE384_09295	COG1214	PFAM Peptidase M22, glycoprotease
FE384_09300	COG1199	ATP-dependent helicase activity
FE384_09305	COG0251	oxidation-reduction process
FE384_09320	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FE384_09330	COG1760	l-serine dehydratase
FE384_09335	COG2200	EAL domain
FE384_09340	COG1253	flavin adenine dinucleotide binding
FE384_09345	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_09345	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_09350	COG3715	PTS system
FE384_09355	COG3716	PTS system mannose fructose sorbose family IID component
FE384_09370	COG2226	methyltransferase
FE384_09375	COG1278	Cold shock
FE384_09400	COG1414	Transcriptional regulator
FE384_09405	COG2814	Major facilitator Superfamily
FE384_09415	COG0793	Belongs to the peptidase S41A family
FE384_09425	COG1956	GAF domain-containing protein
FE384_09430	COG2995	paraquat-inducible protein a
FE384_09435	COG3008	intermembrane lipid transfer
FE384_09455	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FE384_09465	COG1276	copper resistance
FE384_09470	COG2372	response to copper ion
FE384_09480	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FE384_09485	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FE384_09490	COG1770	oligopeptidase
FE384_09495	COG2979	Protein of unknown function (DUF533)
FE384_09505	COG3141	response to X-ray
FE384_09515	COG0800	Aldolase
FE384_09520	COG0129	dihydroxy-acid dehydratase activity
FE384_09525	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FE384_09530	COG1737	Transcriptional regulator
FE384_09535	COG0469	pyruvate kinase activity
FE384_09540	COG1560	Kdo2-lipid A biosynthetic process
FE384_09545	COG0739	heme binding
FE384_09550	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FE384_09555	COG1121	(ABC) transporter
FE384_09560	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FE384_09590	COG0217	transcriptional regulatory protein
FE384_09595	COG0494	nUDIX hydrolase
FE384_09605	COG1335	isochorismatase
FE384_09610	COG1801	Protein of unknown function DUF72
FE384_09615	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FE384_09630	COG0243	molybdopterin cofactor binding
FE384_09635	COG3005	denitrification pathway
FE384_09645	COG3102	Protein conserved in bacteria
FE384_09655	COG3755	Protein conserved in bacteria
FE384_09665	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FE384_09670	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FE384_09675	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FE384_09680	COG0745	RESPONSE REGULATOR receiver
FE384_09685	COG2201	protein-glutamate methylesterase activity
FE384_09690	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FE384_09695	COG0840	transmembrane signaling receptor activity
FE384_09700	COG0840	transmembrane signaling receptor activity
FE384_09705	COG0835	chemotaxis
FE384_09710	COG0643	Histidine kinase
FE384_09710	COG2198	Histidine kinase
FE384_09715	COG1360	Flagellar Motor Protein
FE384_09720	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FE384_09740	COG0589	response to stress
FE384_09750	COG1877	trehalose-phosphatase activity
FE384_09755	COG1172	Belongs to the binding-protein-dependent transport system permease family
FE384_09760	COG1129	ABC transporter
FE384_09765	COG1879	ABC-type sugar transport system periplasmic component
FE384_09770	COG1528	Iron-storage protein
FE384_09790	COG1528	Iron-storage protein
FE384_09800	COG0814	amino acid
FE384_09805	COG3012	SEC-C Motif Domain Protein
FE384_09805	COG3318	Belongs to the UPF0149 family
FE384_09825	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FE384_09835	COG2197	response regulator
FE384_09850	COG2197	response regulator
FE384_09880	COG1191	sigma factor activity
FE384_09885	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FE384_09890	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FE384_09895	COG1516	flagellar protein fliS
FE384_09905	COG0366	Alpha amylase catalytic
FE384_09915	COG2391	methyltransferase activity
FE384_09920	COG0425	Belongs to the sulfur carrier protein TusA family
FE384_09925	COG2135	peptidase activity
FE384_09930	COG0454	-acetyltransferase
FE384_09955	COG1766	The M ring may be actively involved in energy transduction
FE384_09960	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FE384_09965	COG1317	bacterial-type flagellum organization
FE384_09975	COG2882	bacterial-type flagellum organization
FE384_09980	COG3144	bacterial-type flagellum assembly
FE384_09985	COG1580	Controls the rotational direction of flagella during chemotaxis
FE384_09990	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FE384_09995	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FE384_10000	COG3190	flagellar
FE384_10005	COG1338	Plays a role in the flagellum-specific transport system
FE384_10010	COG1987	bacterial-type flagellum assembly
FE384_10015	COG1684	flagellar biosynthetic protein fliR
FE384_10020	COG2197	response regulator
FE384_10045	COG3706	GGDEF domain
FE384_10050	COG5475	Uncharacterized small protein (DUF2158)
FE384_10055	COG2354	Protein conserved in bacteria
FE384_10060	COG0697	spore germination
FE384_10065	COG3727	T/G mismatch-specific endonuclease activity
FE384_10070	COG0270	DNA (cytosine-5-)-methyltransferase activity
FE384_10075	COG1418	mRNA catabolic process
FE384_10100	COG2205	protein histidine kinase activity
FE384_10105	COG0745	RESPONSE REGULATOR receiver
FE384_10110	COG2351	hydroxyisourate hydrolase activity
FE384_10125	COG3443	Belongs to the bacterial solute-binding protein 9 family
FE384_10130	COG3038	cytochrome b561
FE384_10140	COG3228	Belongs to the MtfA family
FE384_10150	COG1470	cell adhesion involved in biofilm formation
FE384_10150	COG1388	LysM domain
FE384_10160	COG0477	Major facilitator Superfamily
FE384_10165	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FE384_10180	COG0534	Mate efflux family protein
FE384_10190	COG0583	DNA-binding transcription factor activity
FE384_10195	COG0583	DNA-binding transcription factor activity
FE384_10205	COG1376	ErfK ybiS ycfS ynhG family protein
FE384_10220	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
FE384_10230	COG3039	Transposase
FE384_10265	COG3468	outer membrane autotransporter barrel domain protein
FE384_10270	COG2020	methyltransferase activity
FE384_10275	COG2003	Belongs to the UPF0758 family
FE384_10310	COG4917	ethanolamine utilization protein
FE384_10320	COG1289	transmembrane transporter activity
FE384_10325	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FE384_10330	COG1686	Belongs to the peptidase S11 family
FE384_10335	COG2925	Exonuclease
FE384_10340	COG0425	Belongs to the sulfur carrier protein TusA family
FE384_10345	COG2391	methyltransferase activity
FE384_10350	COG0531	amino acid
FE384_10360	COG0583	DNA-binding transcription factor activity
FE384_10365	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FE384_10370	COG4115	mRNA cleavage
FE384_10375	COG2161	toxin-antitoxin pair type II binding
FE384_10390	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FE384_10400	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FE384_10400	COG0131	Imidazoleglycerol-phosphate dehydratase
FE384_10405	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FE384_10420	COG0140	phosphoribosyl-ATP diphosphatase activity
FE384_10420	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FE384_10425	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FE384_10430	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FE384_10435	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FE384_10445	COG3039	Transposase
FE384_10455	COG0438	transferase activity, transferring glycosyl groups
FE384_10475	COG0562	UDP-galactopyranose mutase
FE384_10480	COG2244	polysaccharide biosynthetic process
FE384_10485	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
FE384_10500	COG1216	Glycosyl transferase, family 2
FE384_10510	COG0438	transferase activity, transferring glycosyl groups
FE384_10515	COG1045	serine acetyltransferase
FE384_10520	COG0463	Glycosyl transferase, family 2
FE384_10530	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FE384_10535	COG1596	polysaccharide export
FE384_10540	COG1253	flavin adenine dinucleotide binding
FE384_10545	COG2982	Protein involved in outer membrane biogenesis
FE384_10555	COG0572	uridine kinase
FE384_10560	COG5001	Diguanylate cyclase
FE384_10560	COG3447	MASE1 domain protein
FE384_10560	COG5002	protein histidine kinase activity
FE384_10565	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FE384_10570	COG0443	Heat shock 70 kDa protein
FE384_10575	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
FE384_10580	COG3779	Protein conserved in bacteria
FE384_10585	COG0631	protein serine/threonine phosphatase activity
FE384_10590	COG4245	von Willebrand factor, type A
FE384_10625	COG2205	protein histidine kinase activity
FE384_10630	COG0745	RESPONSE REGULATOR receiver
FE384_10635	COG3422	double-strand break repair
FE384_10685	COG1063	alcohol dehydrogenase
FE384_10690	COG3775	system Galactitol-specific IIC component
FE384_10695	COG3414	Phosphotransferase system galactitol-specific IIB component
FE384_10700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_10715	COG1830	Aldolase
FE384_10720	COG2211	Major facilitator Superfamily
FE384_10725	COG1397	ADP-ribosylglycohydrolase
FE384_10730	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_10735	COG2188	Transcriptional regulator
FE384_10740	COG3757	hydrolase, family 25
FE384_10745	COG0351	phosphomethylpyrimidine kinase
FE384_10760	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FE384_10765	COG5455	response to cobalt ion
FE384_10770	COG3539	Fimbrial protein
FE384_10775	COG3188	usher protein
FE384_10780	COG3121	Chaperone
FE384_10785	COG3539	Fimbrial protein
FE384_10795	COG0489	protein tyrosine kinase activity
FE384_10810	COG3831	ATPase activity
FE384_10820	COG0714	Associated with various cellular activities
FE384_10825	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FE384_10830	COG3552	Protein containing von Willebrand factor type A (VWA) domain
FE384_10835	COG4715	Zinc finger, swim domain protein
FE384_10840	COG4808	Protein conserved in bacteria
FE384_10845	COG4807	Protein conserved in bacteria
FE384_10850	COG3279	Response regulator of the LytR AlgR family
FE384_10855	COG3275	phosphorelay sensor kinase activity
FE384_10860	COG0789	Transcriptional regulator
FE384_10870	COG1174	glycine betaine transport
FE384_10875	COG1125	glycine betaine transport
FE384_10880	COG1174	glycine betaine transport
FE384_10885	COG1732	Glycine betaine
FE384_10890	COG1472	Belongs to the glycosyl hydrolase 3 family
FE384_10895	COG0277	FAD linked oxidase domain protein
FE384_10900	COG1686	Belongs to the peptidase S11 family
FE384_10910	COG0586	Pfam SNARE associated Golgi protein
FE384_10915	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_10930	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FE384_10940	COG1346	cytolysis
FE384_10950	COG2949	membrane
FE384_10960	COG0493	'glutamate synthase
FE384_10965	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FE384_10965	COG0167	dihydroorotate dehydrogenase activity
FE384_10970	COG4211	Belongs to the binding-protein-dependent transport system permease family
FE384_10975	COG1129	ABC transporter
FE384_10980	COG1879	ABC-type sugar transport system periplasmic component
FE384_10985	COG1609	Transcriptional regulator
FE384_10990	COG2311	Membrane
FE384_11005	COG4771	TonB-dependent receptor
FE384_11010	COG0833	amino acid
FE384_11015	COG0583	DNA-binding transcription factor activity
FE384_11020	COG2855	membrane
FE384_11025	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FE384_11030	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_11030	COG1522	sequence-specific DNA binding
FE384_11035	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FE384_11045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FE384_11050	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FE384_11055	COG2313	pseudouridylate synthase activity
FE384_11060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_11065	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_11065	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FE384_11065	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_11070	COG1105	Belongs to the carbohydrate kinase PfkB family
FE384_11075	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_11075	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_11080	COG2814	Major facilitator Superfamily
FE384_11095	COG0246	Mannitol dehydrogenase
FE384_11100	COG0523	cobalamin synthesis protein
FE384_11105	COG0671	phosphoesterase, PA-phosphatase related
FE384_11110	COG0791	NLP P60 protein
FE384_11115	COG2200	EAL domain
FE384_11120	COG4166	transmembrane transport
FE384_11125	COG4174	ABC transporter (Permease)
FE384_11130	COG4239	(ABC) transporter, permease
FE384_11135	COG4172	Belongs to the ABC transporter superfamily
FE384_11145	COG2814	Major facilitator Superfamily
FE384_11150	COG1187	pseudouridine synthase activity
FE384_11155	COG1061	Type III restriction enzyme res subunit
FE384_11175	COG3083	sulfuric ester hydrolase activity
FE384_11190	COG3039	Transposase
FE384_11195	COG2197	response regulator
FE384_11200	COG4235	cytochrome complex assembly
FE384_11200	COG3088	subunit of a heme lyase
FE384_11205	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FE384_11210	COG1138	Cytochrome C-type biogenesis protein
FE384_11220	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FE384_11225	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FE384_11230	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FE384_11240	COG3005	denitrification pathway
FE384_11245	COG3043	anaerobic respiration
FE384_11250	COG0348	domain, Protein
FE384_11255	COG0437	4 iron, 4 sulfur cluster binding
FE384_11265	COG3062	negative regulation of establishment of protein localization
FE384_11270	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_11270	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_11285	COG4615	Cyclic peptide transporter
FE384_11290	COG3145	DNA-N1-methyladenine dioxygenase activity
FE384_11295	COG2169	Transcriptional regulator
FE384_11295	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FE384_11300	COG1477	protein flavinylation
FE384_11305	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FE384_11310	COG2198	Histidine kinase
FE384_11310	COG0642	Histidine kinase
FE384_11315	COG2197	response regulator
FE384_11320	COG0784	Response regulator, receiver
FE384_11320	COG2205	protein histidine kinase activity
FE384_11325	COG3852	Histidine kinase
FE384_11330	COG2204	response regulator
FE384_11335	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FE384_11340	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FE384_11345	COG2031	fatty acid transporter
FE384_11355	COG4676	Protein conserved in bacteria
FE384_11360	COG5445	Predicted secreted protein (DUF2300)
FE384_11370	COG3234	Protein of unknown function (DUF1175)
FE384_11375	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
FE384_11380	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FE384_11390	COG3468	outer membrane autotransporter barrel domain protein
FE384_11395	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FE384_11400	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FE384_11405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FE384_11410	COG3642	lipopolysaccharide core region biosynthetic process
FE384_11420	COG0584	glycerophosphoryl diester phosphodiesterase
FE384_11425	COG2271	Major facilitator Superfamily
FE384_11430	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FE384_11440	COG0247	lactate metabolic process
FE384_11445	COG5464	transposase or invertase
FE384_11460	COG2271	Major facilitator Superfamily
FE384_11470	COG1414	Transcriptional regulator
FE384_11535	COG0318	PFAM AMP-dependent synthetase and ligase
FE384_11545	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FE384_11560	COG1169	isochorismate synthase
FE384_11565	COG4575	ribosome binding
FE384_11570	COG2153	protein acetylation
FE384_11580	COG5160	protein modification by small protein removal
FE384_11585	COG2304	oxidoreductase activity
FE384_11590	COG2234	aminopeptidase activity
FE384_11610	COG0457	Tetratricopeptide repeat
FE384_11620	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FE384_11625	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FE384_11635	COG0839	Belongs to the complex I subunit 6 family
FE384_11640	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FE384_11650	COG1034	ATP synthesis coupled electron transport
FE384_11655	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FE384_11660	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FE384_11680	COG0583	DNA-binding transcription factor activity
FE384_11685	COG0436	Aminotransferase
FE384_11695	COG0490	domain, Protein
FE384_11695	COG0471	metal ion transport
FE384_11700	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FE384_11715	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FE384_11720	COG0857	belongs to the CobB CobQ family
FE384_11720	COG0280	phosphate acetyltransferase
FE384_11725	COG1288	antiporter activity
FE384_11730	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FE384_11735	COG0622	Phosphoesterase
FE384_11740	COG0625	glutathione transferase activity
FE384_11750	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FE384_11755	COG1090	epimerase
FE384_11760	COG5464	transposase or invertase
FE384_11765	COG4598	ABC transporter
FE384_11770	COG4160	amino acid transport
FE384_11775	COG4215	(ABC) transporter
FE384_11780	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FE384_11785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FE384_11790	COG0163	prenyltransferase activity
FE384_11795	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FE384_11800	COG1286	toxin biosynthetic process
FE384_11805	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FE384_11810	COG0285	dihydrofolate synthase activity
FE384_11820	COG0586	Pfam SNARE associated Golgi protein
FE384_11830	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FE384_11845	COG2814	Major facilitator Superfamily
FE384_11850	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FE384_11865	COG3101	peptidyl-lysine hydroxylation
FE384_11870	COG0730	response to heat
FE384_11885	COG2890	protein-(glutamine-N5) methyltransferase activity
FE384_11900	COG3539	Fimbrial protein
FE384_11905	COG3539	Fimbrial protein
FE384_11910	COG3539	Fimbrial protein
FE384_11915	COG3121	Chaperone
FE384_11925	COG3539	Fimbrial protein
FE384_11930	COG2062	phosphohistidine phosphatase, SixA
FE384_11945	COG3691	Protein conserved in bacteria
FE384_11950	COG2067	long-chain fatty acid transport protein
FE384_11960	COG2853	Lipoprotein
FE384_11965	COG2116	formate transmembrane transporter activity
FE384_11975	COG0582	viral genome integration into host DNA
FE384_11980	COG2246	polysaccharide biosynthetic process
FE384_11985	COG0463	Glycosyl transferase, family 2
FE384_12015	COG4725	Belongs to the MT-A70-like family
FE384_12025	COG1846	Transcriptional regulator
FE384_12035	COG5532	Uncharacterized conserved protein (DUF2303)
FE384_12040	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FE384_12055	COG3311	Transcriptional regulator
FE384_12060	COG0583	DNA-binding transcription factor activity
FE384_12065	COG2610	gluconate transmembrane transporter activity
FE384_12075	COG0477	Major facilitator Superfamily
FE384_12080	COG1566	PFAM secretion protein HlyD family protein
FE384_12085	COG2197	response regulator
FE384_12090	COG2198	Histidine kinase
FE384_12090	COG0784	Response regulator, receiver
FE384_12090	COG2205	protein histidine kinase activity
FE384_12090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FE384_12095	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FE384_12100	COG0679	Auxin Efflux Carrier
FE384_12105	COG0028	Belongs to the TPP enzyme family
FE384_12130	COG1560	Kdo2-lipid A biosynthetic process
FE384_12140	COG0436	Aminotransferase
FE384_12145	COG3275	phosphorelay sensor kinase activity
FE384_12150	COG3279	Response regulator of the LytR AlgR family
FE384_12155	COG2207	Transcriptional regulator
FE384_12160	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_12160	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_12160	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FE384_12165	COG1363	Peptidase, m42
FE384_12170	COG0006	proline dipeptidase activity
FE384_12175	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_12180	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_12190	COG0038	chloride channel
FE384_12205	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FE384_12210	COG3385	transposase activity
FE384_12215	COG2199	diguanylate cyclase activity
FE384_12215	COG2200	EAL domain
FE384_12230	COG3415	Transposase
FE384_12235	COG3415	Transposase
FE384_12270	COG0583	DNA-binding transcription factor activity
FE384_12280	COG2211	Major facilitator Superfamily
FE384_12285	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FE384_12295	COG0583	DNA-binding transcription factor activity
FE384_12300	COG0385	Bile acid
FE384_12305	COG3530	Putative quorum-sensing-regulated virulence factor
FE384_12325	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FE384_12330	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_12335	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FE384_12340	COG2190	(PTS) system
FE384_12355	COG4884	unkown
FE384_12355	COG3831	ATPase activity
FE384_12360	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FE384_12365	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FE384_12370	COG4208	sulfate ABC transporter
FE384_12375	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FE384_12380	COG4150	thiosulfate binding
FE384_12385	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_12400	COG1263	PTS System
FE384_12400	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_12405	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FE384_12410	COG2837	iron assimilation
FE384_12425	COG0456	acetyltransferase
FE384_12430	COG0860	N-Acetylmuramoyl-L-alanine amidase
FE384_12440	COG2207	Transcriptional regulator
FE384_12445	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FE384_12450	COG4816	utilization protein
FE384_12460	COG4303	Ethanolamine ammonia lyase large subunit
FE384_12465	COG4819	ethanolamine utilization protein
FE384_12470	COG3192	ethanolamine utilization protein
FE384_12475	COG1454	alcohol dehydrogenase
FE384_12480	COG4820	ethanolamine utilization protein (EutJ)
FE384_12485	COG1012	belongs to the aldehyde dehydrogenase family
FE384_12490	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
FE384_12495	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FE384_12500	COG0280	phosphate acetyltransferase
FE384_12505	COG4812	Cobalamin adenosyltransferase
FE384_12510	COG4766	ethanolamine catabolic process
FE384_12515	COG4917	ethanolamine utilization protein
FE384_12520	COG4810	utilization protein
FE384_12525	COG0281	malic enzyme
FE384_12525	COG0280	phosphate acetyltransferase
FE384_12530	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FE384_12535	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FE384_12540	COG5342	invasion associated locus B
FE384_12550	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_12550	COG0493	'glutamate synthase
FE384_12555	COG3850	Histidine kinase
FE384_12560	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FE384_12570	COG1393	Belongs to the ArsC family
FE384_12585	COG0400	carboxylic ester hydrolase activity
FE384_12590	COG1444	tRNA N-acetyltransferase activity
FE384_12595	COG2321	neutral zinc metallopeptidase
FE384_12605	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FE384_12615	COG2716	regulation of RNA biosynthetic process
FE384_12620	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FE384_12625	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_12630	COG0651	ATP synthesis coupled electron transport
FE384_12635	COG0650	Formate hydrogenlyase subunit 4
FE384_12640	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FE384_12645	COG4237	Hydrogenase 4 membrane
FE384_12650	COG0651	ATP synthesis coupled electron transport
FE384_12655	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FE384_12655	COG3261	NADH dehydrogenase
FE384_12660	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FE384_12665	COG3260	NADH ubiquinone oxidoreductase 20
FE384_12675	COG3604	Transcriptional regulator
FE384_12680	COG2116	formate transmembrane transporter activity
FE384_12685	COG0628	permease
FE384_12690	COG4783	chaperone-mediated protein folding
FE384_12695	COG1393	Belongs to the ArsC family
FE384_12705	COG2233	PERMEase
FE384_12720	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FE384_12725	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FE384_12730	COG0248	Ppx GppA phosphatase
FE384_12735	COG2200	EAL domain
FE384_12745	COG3133	Outer membrane lipoprotein
FE384_12760	COG0517	IMP dehydrogenase activity
FE384_12760	COG0516	GMP reductase activity
FE384_12770	COG1645	bacterial-type flagellum-dependent swarming motility
FE384_12780	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FE384_12785	COG2976	Protein conserved in bacteria
FE384_12815	COG4953	penicillin-binding protein 1C
FE384_12820	COG2373	Large extracellular alpha-helical protein
FE384_12825	COG2897	thiosulfate sulfurtransferase activity
FE384_12840	COG2975	iron-sulfur cluster assembly
FE384_12845	COG0633	Ferredoxin
FE384_12865	COG0822	iron-sulfur transferase activity
FE384_12885	COG0483	inositol monophosphate 1-phosphatase activity
FE384_12890	COG1073	alpha beta
FE384_12900	COG2814	Major facilitator Superfamily
FE384_12905	COG0583	DNA-binding transcription factor activity
FE384_12910	COG4638	Rieske (2fe-2S)
FE384_12935	COG2259	Doxx family
FE384_12940	COG2017	converts alpha-aldose to the beta-anomer
FE384_12945	COG1063	alcohol dehydrogenase
FE384_12950	COG1172	Belongs to the binding-protein-dependent transport system permease family
FE384_12955	COG1129	ABC transporter
FE384_12960	COG1879	ABC-type sugar transport system periplasmic component
FE384_12965	COG0457	Tetratricopeptide repeat
FE384_12970	COG1940	carbohydrate kinase activity
FE384_12980	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FE384_12980	COG1017	nitric oxide dioxygenase activity
FE384_12985	COG0347	Belongs to the P(II) protein family
FE384_12990	COG2204	response regulator
FE384_12995	COG3170	Tfp pilus assembly protein FimV
FE384_13000	COG2205	protein histidine kinase activity
FE384_13005	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FE384_13005	COG0047	phosphoribosylformylglycinamidine synthase activity
FE384_13015	COG0590	tRNA wobble adenosine to inosine editing
FE384_13020	COG0560	Phosphoserine phosphatase
FE384_13025	COG1737	Transcriptional regulator
FE384_13030	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_13045	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FE384_13065	COG0681	Belongs to the peptidase S26 family
FE384_13075	COG3086	response to oxidative stress
FE384_13080	COG3026	antisigma factor binding
FE384_13085	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FE384_13090	COG1595	DNA-templated transcription, initiation
FE384_13100	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FE384_13105	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FE384_13110	COG0513	Belongs to the DEAD box helicase family
FE384_13115	COG0583	DNA-binding transcription factor activity
FE384_13135	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FE384_13140	COG3118	belongs to the thioredoxin family
FE384_13150	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FE384_13150	COG1042	CoA-binding domain protein
FE384_13150	COG0045	succinate-CoA ligase (ADP-forming) activity
FE384_13155	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FE384_13160	COG5544	Lipoprotein
FE384_13165	COG0477	Major facilitator Superfamily
FE384_13190	COG0542	response to heat
FE384_13200	COG0564	pseudouridine synthase activity
FE384_13205	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FE384_13210	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FE384_13220	COG1605	Chorismate mutase
FE384_13220	COG0077	Prephenate dehydratase
FE384_13225	COG0287	Prephenate dehydrogenase
FE384_13225	COG1605	Chorismate mutase
FE384_13230	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FE384_13245	COG2199	diguanylate cyclase activity
FE384_13250	COG2885	chlorophyll binding
FE384_13275	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FE384_13280	COG4137	Cytochrome C assembly protein
FE384_13285	COG4536	flavin adenine dinucleotide binding
FE384_13300	COG0497	DNA recombination
FE384_13305	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FE384_13310	COG2914	Belongs to the UPF0125 (RnfH) family
FE384_13315	COG2867	negative regulation of translational initiation
FE384_13330	COG0582	viral genome integration into host DNA
FE384_13340	COG3311	Transcriptional regulator
FE384_13345	COG4983	Phage plasmid primase, P4 family domain protein
FE384_13355	COG1204	response to ionizing radiation
FE384_13365	COG1479	Protein of unknown function DUF262
FE384_13380	COG3596	GTP binding
FE384_13390	COG2378	regulation of single-species biofilm formation
FE384_13435	COG2003	Belongs to the UPF0758 family
FE384_13455	COG3468	outer membrane autotransporter barrel domain protein
FE384_13495	COG0579	oxidoreductase
FE384_13500	COG1012	belongs to the aldehyde dehydrogenase family
FE384_13505	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FE384_13510	COG1113	amino acid transport
FE384_13515	COG1802	Transcriptional regulator
FE384_13520	COG1652	LysM domain
FE384_13525	COG0401	homolog of Blt101
FE384_13530	COG0640	Transcriptional regulator
FE384_13535	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FE384_13540	COG2916	Histone family protein nucleoid-structuring protein H-NS
FE384_13555	COG4575	ribosome binding
FE384_13560	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FE384_13565	COG1780	Probably involved in ribonucleotide reductase function
FE384_13570	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FE384_13575	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FE384_13580	COG4175	Glycine betaine
FE384_13585	COG4176	ABC-type proline glycine betaine transport system permease component
FE384_13590	COG2113	Glycine betaine
FE384_13600	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FE384_13610	COG1846	Transcriptional regulator
FE384_13615	COG1566	PFAM secretion protein HlyD family protein
FE384_13620	COG2814	Major facilitator Superfamily
FE384_13635	COG1238	metal cluster binding
FE384_13640	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FE384_13690	COG1546	Belongs to the CinA family
FE384_13695	COG2951	lytic endotransglycosylase activity
FE384_13700	COG3730	PTS system glucitol sorbitol-specific
FE384_13710	COG3731	PTS system glucitol sorbitol-specific IIA component
FE384_13715	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_13720	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_13725	COG1349	DNA-binding transcription factor activity
FE384_13730	COG0517	IMP dehydrogenase activity
FE384_13730	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FE384_13750	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FE384_13755	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_13760	COG1609	Transcriptional regulator
FE384_13765	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_13765	COG1263	PTS System
FE384_13770	COG2723	6-phospho-beta-galactosidase activity
FE384_13775	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FE384_13785	COG3260	NADH ubiquinone oxidoreductase 20
FE384_13790	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FE384_13795	COG3261	NADH dehydrogenase
FE384_13795	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FE384_13800	COG0650	Formate hydrogenlyase subunit 4
FE384_13805	COG0651	ATP synthesis coupled electron transport
FE384_13810	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_13825	COG0375	protein maturation
FE384_13830	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FE384_13835	COG0298	carbon dioxide binding
FE384_13840	COG0409	Hydrogenase expression formation protein
FE384_13845	COG0309	Hydrogenase expression formation protein (HypE)
FE384_13850	COG3604	Transcriptional regulator
FE384_13865	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FE384_13870	COG1349	DNA-binding transcription factor activity
FE384_13875	COG2084	Dehydrogenase
FE384_13880	COG3395	kinase activity
FE384_13885	COG0235	Class ii aldolase
FE384_13890	COG3622	Belongs to the hyi family
FE384_13895	COG2610	gluconate transmembrane transporter activity
FE384_13905	COG1388	LysM domain
FE384_13905	COG4942	peptidase
FE384_13960	COG2234	aminopeptidase activity
FE384_13965	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FE384_13970	COG1518	maintenance of DNA repeat elements
FE384_13985	COG1857	crispr-associated protein
FE384_14000	COG1203	CRISPR-associated helicase, Cas3
FE384_14020	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FE384_14025	COG0720	synthase
FE384_14030	COG0644	oxidoreductase
FE384_14035	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FE384_14040	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FE384_14045	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FE384_14050	COG2086	electron transfer activity
FE384_14055	COG0477	Major facilitator Superfamily
FE384_14060	COG0277	FAD linked oxidase domain protein
FE384_14065	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_14070	COG2223	nitrite transmembrane transporter activity
FE384_14075	COG1070	Carbohydrate kinase
FE384_14080	COG0602	queuosine metabolic process
FE384_14090	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FE384_14105	COG3956	TIGRFAM MazG family protein
FE384_14110	COG2337	Toxic component of a toxin-antitoxin (TA) module
FE384_14115	COG2336	PFAM SpoVT AbrB
FE384_14120	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FE384_14125	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FE384_14130	COG4999	Histidine kinase
FE384_14130	COG3850	Histidine kinase
FE384_14130	COG2205	protein histidine kinase activity
FE384_14130	COG3437	response regulator, receiver
FE384_14135	COG4948	Mandelate Racemase Muconate Lactonizing
FE384_14140	COG4948	Mandelate Racemase Muconate Lactonizing
FE384_14145	COG2271	Major facilitator Superfamily
FE384_14150	COG0716	FMN binding
FE384_14155	COG0564	pseudouridine synthase activity
FE384_14160	COG3098	single-species biofilm formation
FE384_14175	COG1611	Belongs to the LOG family
FE384_14180	COG0814	amino acid
FE384_14185	COG1760	l-serine dehydratase
FE384_14195	COG1454	alcohol dehydrogenase
FE384_14200	COG0235	Class ii aldolase
FE384_14215	COG1070	Carbohydrate kinase
FE384_14225	COG1349	DNA-binding transcription factor activity
FE384_14235	COG2363	Small membrane protein
FE384_14240	COG0583	DNA-binding transcription factor activity
FE384_14250	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FE384_14255	COG2166	iron-sulfur cluster assembly
FE384_14260	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FE384_14265	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FE384_14285	COG0860	N-Acetylmuramoyl-L-alanine amidase
FE384_14290	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FE384_14290	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FE384_14295	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FE384_14300	COG1074	ATP-dependent DNA helicase activity
FE384_14305	COG1025	Belongs to the peptidase M16 family
FE384_14310	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FE384_14315	COG4967	type IV pilus modification protein PilV
FE384_14325	COG4795	General secretion pathway protein
FE384_14330	COG2165	general secretion pathway protein
FE384_14345	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
FE384_14365	COG0861	Integral membrane protein TerC family
FE384_14375	COG0667	Aldo Keto reductase
FE384_14395	COG1609	Transcriptional regulator
FE384_14400	COG0019	diaminopimelate decarboxylase activity
FE384_14405	COG0583	DNA-binding transcription factor activity
FE384_14410	COG1794	racemase activity, acting on amino acids and derivatives
FE384_14415	COG2814	Major facilitator Superfamily
FE384_14420	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_14430	COG0183	Belongs to the thiolase family
FE384_14435	COG0814	amino acid
FE384_14440	COG2771	luxR family
FE384_14445	COG3710	Transcriptional regulator
FE384_14470	COG0457	Tetratricopeptide repeat
FE384_14475	COG3710	Transcriptional regulator
FE384_14475	COG0457	Tetratricopeptide repeat
FE384_14525	COG4942	peptidase
FE384_14530	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FE384_14535	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FE384_14540	COG2080	2 iron, 2 sulfur cluster binding
FE384_14550	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FE384_14555	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FE384_14560	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FE384_14570	COG0549	Belongs to the carbamate kinase family
FE384_14575	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FE384_14575	COG3608	succinylglutamate desuccinylase aspartoacylase
FE384_14580	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FE384_14585	COG2068	MobA-Related Protein
FE384_14590	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_14590	COG0493	'glutamate synthase
FE384_14595	COG0402	S-adenosylhomocysteine deaminase activity
FE384_14600	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FE384_14605	COG2080	2 iron, 2 sulfur cluster binding
FE384_14605	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FE384_14610	COG2233	PERMEase
FE384_14615	COG0402	S-adenosylhomocysteine deaminase activity
FE384_14620	COG2252	PERMEase
FE384_14625	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_14635	COG2233	PERMEase
FE384_14655	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FE384_14665	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FE384_14670	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FE384_14675	COG4974	Belongs to the 'phage' integrase family
FE384_14680	COG0716	FMN binding
FE384_14690	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FE384_14700	COG1272	protein, Hemolysin III
FE384_14710	COG2723	6-phospho-beta-galactosidase activity
FE384_14715	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_14740	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FE384_14745	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FE384_14750	COG0006	proline dipeptidase activity
FE384_14770	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FE384_14780	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FE384_14800	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FE384_14800	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FE384_14805	COG1703	isobutyryl-CoA mutase activity
FE384_14810	COG1024	Enoyl-CoA hydratase
FE384_14815	COG0427	acetyl-CoA hydrolase
FE384_14820	COG0583	DNA-binding transcription factor activity
FE384_14825	COG2968	Membrane
FE384_14830	COG1279	arginine transmembrane transporter activity
FE384_14835	COG0668	transmembrane transport
FE384_14840	COG0191	fructose-bisphosphate aldolase activity
FE384_14855	COG1072	(Pantothenic acid kinase))
FE384_14860	COG3722	fumarate hydratase activity
FE384_14865	COG1494	fructose-1,6-bisphosphatase
FE384_14870	COG1063	alcohol dehydrogenase
FE384_14875	COG2213	PTS system mannitol-specific
FE384_14880	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_14885	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FE384_14890	COG0501	Belongs to the peptidase M48B family
FE384_14900	COG1166	arginine decarboxylase activity
FE384_14915	COG2814	Major facilitator Superfamily
FE384_14925	COG2356	endonuclease I
FE384_14930	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FE384_14935	COG0189	ligase activity
FE384_14950	COG2805	Type II/IV secretion system protein
FE384_14955	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FE384_14960	COG0762	integral membrane protein
FE384_14970	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FE384_14975	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FE384_14985	COG0252	asparaginase activity
FE384_14995	COG3171	Protein conserved in bacteria
FE384_15005	COG1194	a g-specific adenine glycosylase
FE384_15020	COG2211	Major facilitator Superfamily
FE384_15025	COG1982	Orn Lys Arg decarboxylase major
FE384_15030	COG1811	Na channel or pump
FE384_15040	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FE384_15050	COG3031	protein transport across the cell outer membrane
FE384_15060	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FE384_15065	COG3064	Membrane
FE384_15070	COG1620	l-lactate permease
FE384_15075	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FE384_15080	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FE384_15085	COG0247	lactate metabolic process
FE384_15090	COG0277	FAD linked oxidase domain protein
FE384_15095	COG0277	FAD linked oxidase domain protein
FE384_15100	COG2186	Transcriptional regulator
FE384_15105	COG0456	acetyltransferase
FE384_15110	COG3039	Transposase
FE384_15115	COG2244	polysaccharide biosynthetic process
FE384_15120	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FE384_15125	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FE384_15130	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FE384_15135	COG0306	phosphate transporter
FE384_15140	COG0754	glutathionylspermidine amidase activity
FE384_15145	COG0625	glutathione transferase activity
FE384_15150	COG0298	carbon dioxide binding
FE384_15155	COG0375	protein maturation
FE384_15160	COG1773	rubredoxin
FE384_15165	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FE384_15170	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FE384_15175	COG5557	Pfam Polysulphide reductase, NrfD
FE384_15180	COG0437	4 iron, 4 sulfur cluster binding
FE384_15185	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FE384_15200	COG0667	Aldo Keto reductase
FE384_15210	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_15215	COG0848	biopolymer transport protein
FE384_15220	COG0811	peptide transport
FE384_15225	COG0626	cystathionine gamma-synthase activity
FE384_15230	COG0586	Pfam SNARE associated Golgi protein
FE384_15235	COG2207	Transcriptional regulator
FE384_15240	COG1979	alcohol dehydrogenase
FE384_15245	COG0656	L-ascorbic acid biosynthetic process
FE384_15255	COG4238	major outer membrane lipoprotein
FE384_15260	COG1032	radical SAM domain protein
FE384_15265	COG2132	Multicopper oxidase
FE384_15270	COG0204	Acyl-transferase
FE384_15275	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FE384_15280	COG4166	transmembrane transport
FE384_15285	COG2944	sequence-specific DNA binding
FE384_15295	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FE384_15300	COG3111	PFAM Bacterial OB fold (BOF) protein
FE384_15305	COG0745	RESPONSE REGULATOR receiver
FE384_15310	COG0642	Histidine kinase
FE384_15320	COG2249	NAD(P)H dehydrogenase (quinone) activity
FE384_15325	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FE384_15330	COG0187	DNA topoisomerase II activity
FE384_15335	COG3150	esterase
FE384_15340	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FE384_15345	COG3151	Protein conserved in bacteria
FE384_15350	COG0494	nUDIX hydrolase
FE384_15355	COG1538	Outer membrane efflux protein
FE384_15365	COG0754	glutathionylspermidine amidase activity
FE384_15370	COG3384	dioxygenase
FE384_15385	COG2960	long-chain fatty acid transporting porin activity
FE384_15390	COG3539	Fimbrial protein
FE384_15400	COG3188	usher protein
FE384_15405	COG3121	Chaperone
FE384_15410	COG3539	Fimbrial protein
FE384_15420	COG1585	Membrane protein implicated in regulation of membrane protease activity
FE384_15425	COG2268	Band 7 protein
FE384_15450	COG3025	triphosphatase activity
FE384_15455	COG4991	sh3 domain protein
FE384_15465	COG1968	undecaprenyl-diphosphatase activity
FE384_15470	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FE384_15480	COG0583	DNA-binding transcription factor activity
FE384_15495	COG0471	metal ion transport
FE384_15510	COG0358	DNA primase activity
FE384_15515	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FE384_15530	COG2375	cellular response to nickel ion
FE384_15535	COG1695	Transcriptional regulator
FE384_15540	COG0840	transmembrane signaling receptor activity
FE384_15550	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FE384_15555	COG1609	Transcriptional regulator
FE384_15560	COG3250	beta-galactosidase activity
FE384_15565	COG2731	YhcH YjgK YiaL family protein
FE384_15570	COG0531	amino acid
FE384_15580	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FE384_15580	COG3408	Glycogen debranching enzyme
FE384_15585	COG1902	pentaerythritol trinitrate reductase activity
FE384_15585	COG0446	pyridine nucleotide-disulphide oxidoreductase
FE384_15590	COG5499	transcription regulator containing HTH domain
FE384_15595	COG4680	protein conserved in bacteria
FE384_15605	COG1451	nucleotide metabolic process
FE384_15610	COG2949	membrane
FE384_15615	COG0673	inositol 2-dehydrogenase activity
FE384_15620	COG0861	Integral membrane protein TerC family
FE384_15625	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FE384_15635	COG2721	sulfolactate sulfo-lyase activity
FE384_15645	COG2271	Major facilitator Superfamily
FE384_15650	COG2186	Transcriptional regulator
FE384_15655	COG0586	Pfam SNARE associated Golgi protein
FE384_15665	COG1422	Protein of unknown function (DUF1090)
FE384_15670	COG4575	ribosome binding
FE384_15675	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
FE384_15685	COG2259	Doxx family
FE384_15690	COG0435	Glutathione S-transferase
FE384_15695	COG3152	Membrane
FE384_15700	COG3152	Membrane
FE384_15705	COG0583	DNA-binding transcription factor activity
FE384_15710	COG1741	Belongs to the pirin family
FE384_15725	COG0814	amino acid
FE384_15730	COG1760	l-serine dehydratase
FE384_15735	COG0251	oxidation-reduction process
FE384_15740	COG1882	Formate acetyltransferase
FE384_15745	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FE384_15755	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FE384_15760	COG0583	DNA-binding transcription factor activity
FE384_15785	COG1929	Belongs to the glycerate kinase type-1 family
FE384_15790	COG2084	Dehydrogenase
FE384_15800	COG2271	Major facilitator Superfamily
FE384_15805	COG2721	sulfolactate sulfo-lyase activity
FE384_15810	COG2002	toxin-antitoxin pair type II binding
FE384_15820	COG1349	DNA-binding transcription factor activity
FE384_15830	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_15845	COG2222	sugar isomerase
FE384_15855	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_15860	COG3715	PTS system
FE384_15865	COG3716	PTS system mannose fructose sorbose family IID component
FE384_15870	COG0363	glucosamine-6-phosphate deaminase activity
FE384_15875	COG3539	Fimbrial protein
FE384_15880	COG3121	Chaperone
FE384_15885	COG3188	usher protein
FE384_15890	COG3539	Fimbrial protein
FE384_15895	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FE384_15900	COG3107	peptidoglycan biosynthetic process
FE384_15910	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FE384_15915	COG2823	Periplasmic or secreted lipoprotein
FE384_15920	COG0701	Predicted permease
FE384_15925	COG0702	epimerase
FE384_15930	COG0693	protein deglycase activity
FE384_15945	COG3153	acetyltransferase
FE384_15965	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FE384_15970	COG0814	amino acid
FE384_15975	COG0513	Belongs to the DEAD box helicase family
FE384_15985	COG4785	May be involved in cell division
FE384_16000	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FE384_16015	COG0195	Participates in both transcription termination and antitermination
FE384_16035	COG2194	sulfuric ester hydrolase activity
FE384_16045	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FE384_16055	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FE384_16060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FE384_16070	COG1534	Rna-binding protein
FE384_16075	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FE384_16080	COG2027	D-alanyl-D-alanine carboxypeptidase
FE384_16090	COG0697	spore germination
FE384_16105	COG0142	geranyltranstransferase activity
FE384_16110	COG3423	Transcriptional regulator
FE384_16120	COG5007	Belongs to the BolA IbaG family
FE384_16125	COG3113	response to antibiotic
FE384_16130	COG2854	intermembrane phospholipid transfer
FE384_16135	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FE384_16140	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FE384_16145	COG1127	ABC transporter
FE384_16150	COG0530	calcium, potassium:sodium antiporter activity
FE384_16155	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FE384_16155	COG0517	IMP dehydrogenase activity
FE384_16160	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FE384_16165	COG3117	lipopolysaccharide transmembrane transporter activity
FE384_16170	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FE384_16175	COG1137	ATPase activity
FE384_16180	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FE384_16185	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FE384_16190	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_16200	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_16205	COG0515	serine threonine protein kinase
FE384_16215	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FE384_16220	COG0784	Response regulator, receiver
FE384_16220	COG2198	Histidine kinase
FE384_16220	COG5002	protein histidine kinase activity
FE384_16225	COG1242	4 iron, 4 sulfur cluster binding
FE384_16230	COG0070	glutamate synthase
FE384_16230	COG0067	glutamate synthase
FE384_16230	COG0069	glutamate synthase activity
FE384_16235	COG0493	'glutamate synthase
FE384_16240	COG3539	Fimbrial protein
FE384_16245	COG3121	Chaperone
FE384_16250	COG3188	usher protein
FE384_16260	COG3039	Transposase
FE384_16265	COG3539	Fimbrial protein
FE384_16270	COG4804	nuclease activity
FE384_16275	COG2731	YhcH YjgK YiaL family protein
FE384_16310	COG2969	positive regulation of protein catabolic process
FE384_16315	COG0625	glutathione transferase activity
FE384_16330	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FE384_16335	COG3105	Protein conserved in bacteria
FE384_16340	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FE384_16345	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FE384_16365	COG2732	(Barnase) inhibitor
FE384_16385	COG0583	DNA-binding transcription factor activity
FE384_16390	COG0312	modulator of DNA gyrase
FE384_16395	COG3164	Protein of unknown function
FE384_16400	COG1530	ribonuclease E activity
FE384_16405	COG0424	maF-like protein
FE384_16410	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FE384_16415	COG1792	Involved in formation and maintenance of cell shape
FE384_16420	COG1077	Cell shape determining protein MreB Mrl
FE384_16425	COG2199	diguanylate cyclase activity
FE384_16425	COG2200	EAL domain
FE384_16430	COG0604	alcohol dehydrogenase
FE384_16435	COG0511	ligase activity, forming carbon-carbon bonds
FE384_16440	COG0439	Biotin carboxylase
FE384_16445	COG3924	membrane
FE384_16450	COG4145	pantothenate transmembrane transporter activity
FE384_16460	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FE384_16470	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FE384_16480	COG1309	transcriptional regulator
FE384_16485	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FE384_16490	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FE384_16505	COG4597	amino acid ABC transporter
FE384_16510	COG0765	amino acid transport
FE384_16515	COG1126	abc transporter atp-binding protein
FE384_16560	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FE384_16580	COG0551	DNA topoisomerase type I activity
FE384_16590	COG0758	DNA mediated transformation
FE384_16610	COG0569	domain protein
FE384_16620	COG3036	rescue of stalled ribosome
FE384_16625	COG0789	Transcriptional regulator
FE384_16655	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FE384_16665	COG0201	protein transport
FE384_16755	COG0089	rRNA binding
FE384_16780	COG3267	Type II secretory pathway component ExeA
FE384_16780	COG3409	Peptidoglycan-binding domain 1 protein
FE384_16785	COG3031	protein transport across the cell outer membrane
FE384_16790	COG1450	Type ii and iii secretion system protein
FE384_16795	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FE384_16800	COG1459	type II secretion system
FE384_16805	COG2165	general secretion pathway protein
FE384_16810	COG2165	general secretion pathway protein
FE384_16815	COG2165	general secretion pathway protein
FE384_16820	COG4795	General secretion pathway protein
FE384_16825	COG3156	type II secretion system protein K
FE384_16830	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FE384_16835	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FE384_16840	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FE384_16845	COG2193	ferroxidase activity
FE384_16850	COG2906	2 iron, 2 sulfur cluster binding
FE384_16855	COG3979	chitinase
FE384_16895	COG2964	Protein conserved in bacteria
FE384_16900	COG0545	Peptidyl-prolyl cis-trans isomerase
FE384_16910	COG1047	Peptidyl-prolyl cis-trans
FE384_16915	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FE384_16930	COG0488	(ABC) transporter
FE384_16935	COG0429	hydrolase of the alpha beta-hydrolase fold
FE384_16945	COG3954	Phosphoribulokinase
FE384_16950	COG1765	OsmC-like protein
FE384_16955	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FE384_16960	COG1289	transmembrane transporter activity
FE384_16965	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FE384_16970	COG0512	Glutamine amidotransferase of anthranilate synthase
FE384_16975	COG2184	nucleotidyltransferase activity
FE384_16985	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FE384_16995	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FE384_17000	COG2146	nitrite reductase [NAD(P)H] activity
FE384_17005	COG2116	formate transmembrane transporter activity
FE384_17020	COG0531	amino acid
FE384_17025	COG2222	sugar isomerase
FE384_17030	COG1082	Xylose isomerase domain protein TIM barrel
FE384_17035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_17040	COG2188	Transcriptional regulator
FE384_17045	COG0626	cystathionine gamma-synthase activity
FE384_17060	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FE384_17065	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FE384_17070	COG3457	Alanine racemase
FE384_17080	COG2188	Transcriptional regulator
FE384_17090	COG0180	Tryptophanyl-tRNA synthetase
FE384_17095	COG0546	phosphoglycolate phosphatase activity
FE384_17100	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FE384_17105	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FE384_17110	COG3266	domain, Protein
FE384_17125	COG4796	Type ii and iii secretion system protein
FE384_17140	COG3166	PFAM Fimbrial assembly family protein
FE384_17145	COG4972	Pilus assembly protein
FE384_17150	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FE384_17155	COG0494	nUDIX hydrolase
FE384_17165	COG1011	Hydrolase
FE384_17170	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FE384_17180	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FE384_17190	COG2205	protein histidine kinase activity
FE384_17195	COG0745	RESPONSE REGULATOR receiver
FE384_17200	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FE384_17205	COG2183	response to ionizing radiation
FE384_17210	COG1918	ferrous iron import across plasma membrane
FE384_17215	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FE384_17225	COG5464	transposase or invertase
FE384_17235	COG1040	competence protein
FE384_17245	COG2610	gluconate transmembrane transporter activity
FE384_17250	COG1640	4-alpha-glucanotransferase
FE384_17255	COG0058	SHG alpha-glucan phosphorylase activity
FE384_17270	COG1690	Belongs to the RtcB family
FE384_17275	COG4650	regulator
FE384_17280	COG1349	DNA-binding transcription factor activity
FE384_17295	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FE384_17305	COG0058	SHG alpha-glucan phosphorylase activity
FE384_17330	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FE384_17335	COG2095	MarC family integral membrane protein
FE384_17340	COG2610	gluconate transmembrane transporter activity
FE384_17345	COG3265	gluconokinase activity
FE384_17350	COG1609	Transcriptional regulator
FE384_17355	COG1741	Belongs to the pirin family
FE384_17360	COG0673	inositol 2-dehydrogenase activity
FE384_17365	COG1247	-acetyltransferase
FE384_17370	COG3157	Type VI secretion system effector, Hcp
FE384_17400	COG0405	Gamma-glutamyltransferase
FE384_17410	COG0584	glycerophosphoryl diester phosphodiesterase
FE384_17415	COG3842	ATPase activity
FE384_17420	COG0395	ABC-type sugar transport system, permease component
FE384_17425	COG1175	transmembrane transport
FE384_17430	COG1653	transport
FE384_17435	COG0410	ABC transporter
FE384_17440	COG0411	ABC transporter
FE384_17445	COG4177	L-phenylalanine transmembrane transporter activity
FE384_17450	COG0559	Belongs to the binding-protein-dependent transport system permease family
FE384_17455	COG0683	leucine binding
FE384_17460	COG0456	acetyltransferase
FE384_17465	COG0683	leucine binding
FE384_17470	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FE384_17475	COG2177	Part of the ABC transporter FtsEX involved in
FE384_17480	COG2884	Cell division ATP-binding protein ftsE
FE384_17485	COG0552	protein localization to endoplasmic reticulum
FE384_17490	COG0742	ribosomal rna small subunit methyltransferase
FE384_17495	COG3776	membrane
FE384_17505	COG3714	YhhN family
FE384_17510	COG2217	Heavy metal translocating P-type atpase
FE384_17520	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FE384_17530	COG0477	Major facilitator Superfamily
FE384_17535	COG0628	permease
FE384_17540	COG2091	lysine biosynthetic process via aminoadipic acid
FE384_17545	COG0747	negative chemotaxis
FE384_17550	COG0601	transmembrane transport
FE384_17555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FE384_17560	COG0444	Belongs to the ABC transporter superfamily
FE384_17565	COG1124	(ABC) transporter
FE384_17575	COG3209	COG3209 Rhs family protein
FE384_17590	COG5433	transposase activity
FE384_17595	COG0842	Transport permease protein
FE384_17600	COG0842	Transport permease protein
FE384_17600	COG1129	ABC transporter
FE384_17605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FE384_17625	COG2081	HI0933 family
FE384_17630	COG0306	phosphate transporter
FE384_17640	COG0589	response to stress
FE384_17645	COG3104	oligopeptide transport
FE384_17650	COG0742	ribosomal rna small subunit methyltransferase
FE384_17655	COG0339	signal peptide processing
FE384_17660	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FE384_17665	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FE384_17675	COG0640	Transcriptional regulator
FE384_17680	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FE384_17685	COG1393	Belongs to the ArsC family
FE384_17695	COG3039	Transposase
FE384_17705	COG3065	identical protein binding
FE384_17710	COG2197	response regulator
FE384_17715	COG1285	pathogenesis
FE384_17730	COG3247	response to pH
FE384_17735	COG2771	luxR family
FE384_17745	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FE384_17755	COG2207	Transcriptional regulator
FE384_17760	COG2207	Transcriptional regulator
FE384_17765	COG0076	glutamate decarboxylase activity
FE384_17770	COG1858	cytochrome C peroxidase
FE384_17775	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FE384_17780	COG2197	response regulator
FE384_17785	COG0583	DNA-binding transcription factor activity
FE384_17790	COG1295	ribonuclease BN
FE384_17795	COG0477	Major facilitator Superfamily
FE384_17800	COG2982	Protein involved in outer membrane biogenesis
FE384_17805	COG2200	EAL domain
FE384_17810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_17815	COG0612	Peptidase, M16
FE384_17825	COG2199	diguanylate cyclase activity
FE384_17825	COG2200	EAL domain
FE384_17830	COG3118	belongs to the thioredoxin family
FE384_17830	COG0457	Tetratricopeptide repeat
FE384_17835	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FE384_17840	COG1215	transferase activity, transferring glycosyl groups
FE384_17845	COG1215	transferase activity, transferring glycosyl groups
FE384_17870	COG2194	sulfuric ester hydrolase activity
FE384_17885	COG0814	amino acid
FE384_17890	COG4608	Belongs to the ABC transporter superfamily
FE384_17895	COG0444	Belongs to the ABC transporter superfamily
FE384_17900	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FE384_17905	COG0601	transmembrane transport
FE384_17915	COG0747	negative chemotaxis
FE384_17930	COG2194	sulfuric ester hydrolase activity
FE384_17935	COG2223	nitrite transmembrane transporter activity
FE384_17940	COG5571	outer membrane autotransporter
FE384_17945	COG2818	Glycosylase
FE384_17950	COG0456	acetyltransferase
FE384_17955	COG0243	molybdopterin cofactor binding
FE384_17960	COG2885	chlorophyll binding
FE384_17975	COG2944	sequence-specific DNA binding
FE384_17980	COG1278	Cold shock
FE384_18010	COG3274	enterobacterial common antigen metabolic process
FE384_18015	COG4682	membrane
FE384_18020	COG4682	membrane
FE384_18025	COG1070	Carbohydrate kinase
FE384_18035	COG4213	ABC transporter substrate-binding protein
FE384_18040	COG1129	ABC transporter
FE384_18045	COG4214	carbohydrate transport
FE384_18050	COG1609	Transcriptional regulator
FE384_18050	COG2207	Transcriptional regulator
FE384_18055	COG2992	FlgJ-related protein
FE384_18060	COG0366	Alpha amylase catalytic
FE384_18065	COG3977	Valine--pyruvate aminotransferase
FE384_18070	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FE384_18075	COG1414	Transcriptional regulator
FE384_18085	COG2731	YhcH YjgK YiaL family protein
FE384_18090	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FE384_18100	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FE384_18105	COG1070	Carbohydrate kinase
FE384_18110	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FE384_18115	COG3623	hexulose-6-phosphate isomerase
FE384_18120	COG0235	Class ii aldolase
FE384_18130	COG3713	MltA-interacting MipA family protein
FE384_18135	COG0583	DNA-binding transcription factor activity
FE384_18140	COG1566	PFAM secretion protein HlyD family protein
FE384_18155	COG1012	belongs to the aldehyde dehydrogenase family
FE384_18160	COG1454	alcohol dehydrogenase
FE384_18165	COG3276	selenocysteine insertion sequence binding
FE384_18175	COG0625	glutathione transferase activity
FE384_18180	COG3209	COG3209 Rhs family protein
FE384_18225	COG1566	PFAM secretion protein HlyD family protein
FE384_18235	COG2213	PTS system mannitol-specific
FE384_18235	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_18245	COG3722	fumarate hydratase activity
FE384_18260	COG1620	l-lactate permease
FE384_18265	COG2186	Transcriptional regulator
FE384_18275	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FE384_18280	COG1045	serine acetyltransferase
FE384_18295	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FE384_18300	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FE384_18305	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FE384_18310	COG4942	peptidase
FE384_18315	COG2861	carbohydrate metabolic process
FE384_18320	COG1216	Glycosyl transferase, family 2
FE384_18330	COG0156	8-amino-7-oxononanoate synthase activity
FE384_18345	COG0859	PFAM glycosyl transferase family 9
FE384_18350	COG0859	PFAM glycosyl transferase family 9
FE384_18370	COG3642	lipopolysaccharide core region biosynthetic process
FE384_18380	COG1442	glycosyl transferase family 8
FE384_18385	COG0438	transferase activity, transferring glycosyl groups
FE384_18390	COG0438	transferase activity, transferring glycosyl groups
FE384_18390	COG4641	Protein conserved in bacteria
FE384_18395	COG0515	serine threonine protein kinase
FE384_18400	COG0438	transferase activity, transferring glycosyl groups
FE384_18405	COG0859	PFAM glycosyl transferase family 9
FE384_18410	COG1519	Transferase
FE384_18440	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FE384_18465	COG1561	YicC-like family, N-terminal region
FE384_18470	COG3645	SOS response
FE384_18475	COG2860	membrane
FE384_18495	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FE384_18500	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FE384_18505	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FE384_18510	COG0786	glutamate:sodium symporter activity
FE384_18515	COG2233	PERMEase
FE384_18520	COG2982	Protein involved in outer membrane biogenesis
FE384_18525	COG1501	Belongs to the glycosyl hydrolase 31 family
FE384_18530	COG2211	Major facilitator Superfamily
FE384_18545	COG2814	Major facilitator Superfamily
FE384_18550	COG0697	spore germination
FE384_18555	COG1464	Belongs to the NlpA lipoprotein family
FE384_18575	COG2252	PERMEase
FE384_18585	COG2271	Major facilitator Superfamily
FE384_18590	COG2271	Major facilitator Superfamily
FE384_18595	COG3851	Histidine kinase
FE384_18600	COG2197	response regulator
FE384_18605	COG0440	acetolactate synthase activity
FE384_18610	COG0028	Belongs to the TPP enzyme family
FE384_18625	COG2814	Major facilitator Superfamily
FE384_18630	COG0641	radical SAM
FE384_18640	COG2149	membrane
FE384_18650	COG3119	arylsulfatase activity
FE384_18655	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FE384_18660	COG2207	Transcriptional regulator
FE384_18675	COG2188	Transcriptional regulator
FE384_18695	COG5645	(Lipo)protein
FE384_18700	COG0823	Involved in the tonB-independent uptake of proteins
FE384_18705	COG0644	oxidoreductase
FE384_18710	COG2271	Major facilitator Superfamily
FE384_18720	COG0800	Aldolase
FE384_18725	COG3734	2-keto-3-deoxy-galactonokinase
FE384_18730	COG2186	Transcriptional regulator
FE384_18740	COG0561	phosphatase activity
FE384_18745	COG3753	Protein conserved in bacteria
FE384_18750	COG0187	DNA topoisomerase II activity
FE384_18760	COG0592	DNA-directed DNA polymerase activity
FE384_18810	COG0814	amino acid
FE384_18825	COG2091	lysine biosynthetic process via aminoadipic acid
FE384_18830	COG0431	NADPH-dependent FMN reductase
FE384_18835	COG2252	PERMEase
FE384_18840	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FE384_18850	COG3196	Protein conserved in bacteria
FE384_18855	COG0363	glucosamine-6-phosphate deaminase activity
FE384_18860	COG2382	esterase
FE384_18870	COG2723	6-phospho-beta-galactosidase activity
FE384_18875	COG2190	(PTS) system
FE384_18875	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_18875	COG1263	PTS System
FE384_18885	COG0704	Plays a role in the regulation of phosphate uptake
FE384_18890	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FE384_18895	COG0581	inorganic phosphate transmembrane transporter activity
FE384_18900	COG0573	inorganic phosphate transmembrane transporter activity
FE384_18905	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FE384_18910	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FE384_18960	COG3312	ion transport
FE384_18975	COG0716	FMN binding
FE384_18980	COG1522	sequence-specific DNA binding
FE384_18990	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FE384_19005	COG1869	D-ribose catabolic process
FE384_19015	COG1172	Belongs to the binding-protein-dependent transport system permease family
FE384_19020	COG1879	ABC-type sugar transport system periplasmic component
FE384_19025	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_19030	COG1609	Transcriptional regulator
FE384_19035	COG0477	Major facilitator Superfamily
FE384_19040	COG2186	Transcriptional regulator
FE384_19080	COG3085	chromosome segregation
FE384_19085	COG0606	chelatase, subunit chli
FE384_19105	COG3978	acetolactate synthase activity
FE384_19110	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FE384_19120	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FE384_19125	COG0583	DNA-binding transcription factor activity
FE384_19135	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FE384_19145	COG0210	DNA helicase
FE384_19150	COG0248	Ppx GppA phosphatase
FE384_19160	COG3118	belongs to the thioredoxin family
FE384_19170	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FE384_19175	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FE384_19180	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FE384_19185	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FE384_19190	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FE384_19195	COG1088	dTDP-glucose 4,6-dehydratase activity
FE384_19200	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FE384_19205	COG0456	acetyltransferase
FE384_19210	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FE384_19215	COG2244	polysaccharide biosynthetic process
FE384_19235	COG1113	amino acid transport
FE384_19260	COG0641	radical SAM
FE384_19265	COG3119	arylsulfatase activity
FE384_19270	COG3071	HemY protein
FE384_19275	COG2959	enzyme of heme biosynthesis
FE384_19280	COG1587	Uroporphyrinogen-III synthase
FE384_19290	COG3072	Adenylate cyclase
FE384_19305	COG5567	small periplasmic lipoprotein
FE384_19315	COG3159	Protein conserved in bacteria
FE384_19325	COG1011	Hydrolase
FE384_19330	COG0210	DNA helicase
FE384_19335	COG3698	Phosphodiester glycosidase
FE384_19340	COG0598	Magnesium transport protein CorA
FE384_19355	COG2962	Rard protein
FE384_19360	COG2050	protein possibly involved in aromatic compounds catabolism
FE384_19365	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
FE384_19370	COG0514	ATP-dependent DNA helicase (RecQ)
FE384_19375	COG1280	lysine exporter protein (LysE YggA)
FE384_19380	COG1280	lysine exporter protein (LysE YggA)
FE384_19385	COG2267	carboxylic ester hydrolase activity
FE384_19390	COG0561	phosphatase activity
FE384_19400	COG0583	DNA-binding transcription factor activity
FE384_19410	COG0412	Dienelactone hydrolase
FE384_19415	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FE384_19420	COG1322	Protein conserved in bacteria
FE384_19430	COG3165	ubiquinone biosynthetic process from chorismate
FE384_19440	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FE384_19445	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FE384_19450	COG0805	protein transport
FE384_19455	COG0084	hydrolase, TatD family'
FE384_19460	COG0250	Participates in transcription elongation, termination and antitermination
FE384_19465	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FE384_19470	COG0543	2 iron, 2 sulfur cluster binding
FE384_19475	COG0183	Belongs to the thiolase family
FE384_19490	COG1739	Uncharacterized protein family UPF0029
FE384_19495	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FE384_19500	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FE384_19535	COG1763	Mo-molybdopterin cofactor biosynthetic process
FE384_19540	COG0746	molybdenum cofactor guanylyltransferase activity
FE384_19545	COG3084	Protein conserved in bacteria
FE384_19550	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FE384_19555	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FE384_19560	COG5339	Protein conserved in bacteria
FE384_19565	COG0204	Acyl-transferase
FE384_19575	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FE384_19575	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FE384_19590	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FE384_19600	COG2204	response regulator
FE384_19605	COG3852	Histidine kinase
FE384_19610	COG0174	glutamine synthetase
FE384_19620	COG2188	Transcriptional regulator
FE384_19625	COG1082	Xylose isomerase domain protein TIM barrel
FE384_19630	COG2271	Major facilitator Superfamily
FE384_19635	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FE384_19640	COG2211	Major facilitator Superfamily
FE384_19645	COG2211	Major facilitator Superfamily
FE384_19650	COG1501	Belongs to the glycosyl hydrolase 31 family
FE384_19655	COG2017	converts alpha-aldose to the beta-anomer
FE384_19660	COG2942	2-epimerase
FE384_19665	COG3684	Belongs to the aldolase LacD family
FE384_19670	COG2084	Dehydrogenase
FE384_19675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FE384_19680	COG1349	DNA-binding transcription factor activity
FE384_19685	COG1011	Hydrolase
FE384_19700	COG0456	acetyltransferase
FE384_19705	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FE384_19710	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FE384_19720	COG2864	formate dehydrogenase
FE384_19725	COG0437	4 iron, 4 sulfur cluster binding
FE384_19745	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_19745	COG3711	transcriptional antiterminator
FE384_19750	COG1363	Peptidase, m42
FE384_19755	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_19755	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_19760	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_19800	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FE384_19810	COG2258	MOSC domain
FE384_19815	COG2205	protein histidine kinase activity
FE384_19820	COG0745	RESPONSE REGULATOR receiver
FE384_19825	COG3678	ATP-independent chaperone mediated protein folding
FE384_19840	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FE384_19860	COG3152	Membrane
FE384_19865	COG3691	Protein conserved in bacteria
FE384_19870	COG0589	response to stress
FE384_19875	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FE384_19880	COG1494	fructose-1,6-bisphosphatase
FE384_19890	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FE384_19905	COG1575	Belongs to the MenA family. Type 1 subfamily
FE384_19910	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FE384_19920	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FE384_19925	COG1609	Transcriptional regulator
FE384_19930	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FE384_19940	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FE384_19950	COG0626	cystathionine gamma-synthase activity
FE384_19955	COG0527	aspartate kinase activity
FE384_19955	COG0460	homoserine dehydrogenase
FE384_19960	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FE384_19970	COG0697	spore germination
FE384_19975	COG3738	Protein conserved in bacteria
FE384_19980	COG0371	Dehydrogenase
FE384_19985	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FE384_19990	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_19990	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_19990	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FE384_19995	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_20000	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_20010	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FE384_20015	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FE384_20020	COG2207	Transcriptional regulator
FE384_20025	COG2194	sulfuric ester hydrolase activity
FE384_20040	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FE384_20045	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FE384_20055	COG0583	DNA-binding transcription factor activity
FE384_20065	COG1309	transcriptional regulator
FE384_20080	COG4206	TonB-dependent receptor
FE384_20115	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FE384_20120	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FE384_20120	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FE384_20155	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FE384_20160	COG0250	Participates in transcription elongation, termination and antitermination
FE384_20200	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FE384_20210	COG2104	thiamine diphosphate biosynthetic process
FE384_20215	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FE384_20250	COG3068	Protein conserved in bacteria
FE384_20255	COG0776	regulation of translation
FE384_20265	COG3678	ATP-independent chaperone mediated protein folding
FE384_20270	COG4191	Histidine kinase
FE384_20275	COG2204	response regulator
FE384_20280	COG0151	Belongs to the GarS family
FE384_20315	COG0456	acetyltransferase
FE384_20325	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FE384_20330	COG2224	Isocitrate lyase
FE384_20345	COG1414	Transcriptional regulator
FE384_20350	COG1410	methionine synthase
FE384_20350	COG0646	methionine synthase
FE384_20355	COG1283	sodium-dependent phosphate transmembrane transporter activity
FE384_20365	COG1187	pseudouridine synthase activity
FE384_20375	COG0527	aspartate kinase activity
FE384_20400	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FE384_20415	COG2814	Major facilitator Superfamily
FE384_20415	COG0477	Major facilitator Superfamily
FE384_20420	COG3833	ABC-type maltose transport systems, permease component
FE384_20425	COG1175	transmembrane transport
FE384_20430	COG2182	Extracellular solute-binding protein
FE384_20435	COG3842	ATPase activity
FE384_20450	COG1357	PFAM Pentapeptide repeats (8 copies)
FE384_20470	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FE384_20480	COG0534	Mate efflux family protein
FE384_20485	COG3237	CsbD-like
FE384_20490	COG0735	belongs to the Fur family
FE384_20505	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FE384_20515	COG0604	alcohol dehydrogenase
FE384_20520	COG0305	Participates in initiation and elongation during chromosome replication
FE384_20525	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FE384_20530	COG1448	Aminotransferase
FE384_20540	COG3700	Belongs to the class B bacterial acid phosphatase family
FE384_20545	COG0432	Pfam Uncharacterised protein family UPF0047
FE384_20550	COG2315	Protein conserved in bacteria
FE384_20555	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FE384_20560	COG0629	single-stranded DNA binding
FE384_20570	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FE384_20575	COG2207	Transcriptional regulator
FE384_20580	COG0789	Transcriptional regulator
FE384_20585	COG2252	PERMEase
FE384_20590	COG0025	NhaP-type Na H and K H
FE384_20595	COG1357	PFAM Pentapeptide repeats (8 copies)
FE384_20605	COG3162	membrane
FE384_20610	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FE384_20620	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FE384_20625	COG0437	4 iron, 4 sulfur cluster binding
FE384_20630	COG3301	Polysulphide reductase, NrfD
FE384_20635	COG1138	Cytochrome C-type biogenesis protein
FE384_20640	COG3088	subunit of a heme lyase
FE384_20645	COG4235	cytochrome complex assembly
FE384_20650	COG1301	dicarboxylic acid transport
FE384_20655	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FE384_20665	COG1538	Outer membrane efflux protein
FE384_20670	COG1289	transmembrane transporter activity
FE384_20675	COG1566	PFAM secretion protein HlyD family protein
FE384_20685	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FE384_20690	COG1940	carbohydrate kinase activity
FE384_20695	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FE384_20700	COG1172	Belongs to the binding-protein-dependent transport system permease family
FE384_20705	COG1129	ABC transporter
FE384_20710	COG1879	ABC-type sugar transport system periplasmic component
FE384_20715	COG1737	Transcriptional regulator
FE384_20720	COG0698	ribose 5-phosphate isomerase
FE384_20730	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FE384_20735	COG0456	acetyltransferase
FE384_20740	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FE384_20745	COG3454	Phosphonate metabolism
FE384_20750	COG4778	phosphonate C-P lyase system protein PhnL
FE384_20755	COG4107	phosphonate C-P lyase system protein PhnK
FE384_20760	COG3627	carbon phosphorus lyase activity
FE384_20765	COG3626	phosphonate metabolism
FE384_20770	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FE384_20780	COG2188	Transcriptional regulator
FE384_20790	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FE384_20795	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FE384_20800	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FE384_20805	COG2824	Alkylphosphonate utilization operon protein PhnA
FE384_20810	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FE384_20820	COG0477	Major facilitator Superfamily
FE384_20830	COG0642	Histidine kinase
FE384_20835	COG0745	RESPONSE REGULATOR receiver
FE384_20840	COG2194	sulfuric ester hydrolase activity
FE384_20845	COG0531	amino acid
FE384_20850	COG2207	Transcriptional regulator
FE384_20855	COG1982	Orn Lys Arg decarboxylase major
FE384_20860	COG2169	Transcriptional regulator
FE384_20865	COG1486	melibiose metabolic process
FE384_20870	COG2211	Major facilitator Superfamily
FE384_20875	COG3647	Membrane
FE384_20880	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FE384_20880	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FE384_20885	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FE384_20890	COG4565	transcriptional regulatory protein
FE384_20895	COG3290	protein histidine kinase activity
FE384_20900	COG3592	Divergent 4Fe-4S mono-cluster
FE384_20905	COG2388	GCN5-related N-acetyl-transferase
FE384_20920	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FE384_20925	COG3104	oligopeptide transport
FE384_20935	COG0531	amino acid
FE384_20940	COG3710	Transcriptional regulator
FE384_20950	COG1309	transcriptional regulator
FE384_20955	COG4232	protein-disulfide reductase activity
FE384_20965	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FE384_20970	COG1027	Aspartate ammonia-lyase
FE384_20975	COG3030	protein affecting phage T7 exclusion by the F plasmid
FE384_20980	COG0531	amino acid
FE384_21005	COG1509	lysine 2,3-aminomutase activity
FE384_21015	COG5510	response to toxic substance
FE384_21020	COG5510	response to toxic substance
FE384_21025	COG2076	Multidrug Resistance protein
FE384_21030	COG3040	lipid binding
FE384_21035	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FE384_21050	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FE384_21055	COG1053	succinate dehydrogenase
FE384_21065	COG0531	amino acid
FE384_21080	COG3264	Mechanosensitive ion channel
FE384_21080	COG1511	domain protein
FE384_21120	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FE384_21125	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FE384_21125	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FE384_21130	COG0802	atpase or kinase
FE384_21135	COG0860	N-Acetylmuramoyl-L-alanine amidase
FE384_21155	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FE384_21160	COG0330	HflC and HflK could
FE384_21165	COG0330	HflC and HflK could
FE384_21170	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FE384_21185	COG0557	exoribonuclease II activity
FE384_21190	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FE384_21195	COG3789	protein conserved in bacteria
FE384_21200	COG1842	Phage shock protein A
FE384_21210	COG3766	membrane
FE384_21215	COG5463	Belongs to the UPF0441 family
FE384_21220	COG0754	glutathionylspermidine amidase activity
FE384_21225	COG1960	acyl-CoA dehydrogenase activity
FE384_21235	COG3650	response to hydrogen peroxide
FE384_21240	COG1073	alpha beta
FE384_21255	COG3037	sugar-specific permease SgaT UlaA
FE384_21260	COG3414	Phosphotransferase system galactitol-specific IIB component
FE384_21265	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_21320	COG3061	Opacity-associated protein A
FE384_21325	COG0545	Peptidyl-prolyl cis-trans isomerase
FE384_21330	COG1113	amino acid transport
FE384_21340	COG0697	spore germination
FE384_21345	COG0702	epimerase
FE384_21350	COG1733	regulation of RNA biosynthetic process
FE384_21355	COG0737	Belongs to the 5'-nucleotidase family
FE384_21360	COG1218	3'(2'),5'-bisphosphate nucleotidase
FE384_21370	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FE384_21380	COG1253	flavin adenine dinucleotide binding
FE384_21390	COG0729	surface antigen
FE384_21395	COG2911	Protein conserved in bacteria
FE384_21400	COG2105	PFAM AIG2 family protein
FE384_21405	COG2336	PFAM SpoVT AbrB
FE384_21410	COG2337	Toxic component of a toxin-antitoxin (TA) module
FE384_21415	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FE384_21420	COG1879	ABC-type sugar transport system periplasmic component
FE384_21425	COG1129	ABC transporter
FE384_21430	COG1172	Belongs to the binding-protein-dependent transport system permease family
FE384_21435	COG1172	Belongs to the binding-protein-dependent transport system permease family
FE384_21445	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FE384_21455	COG0312	modulator of DNA gyrase
FE384_21460	COG3783	Cytochrome b(562)
FE384_21465	COG0602	queuosine metabolic process
FE384_21470	COG1328	CTP reductase activity
FE384_21475	COG0366	Alpha amylase catalytic
FE384_21480	COG1263	PTS System
FE384_21480	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FE384_21485	COG1609	Transcriptional regulator
FE384_21495	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FE384_21500	COG0251	oxidation-reduction process
FE384_21520	COG0251	oxidation-reduction process
FE384_21525	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_21530	COG1309	transcriptional regulator
FE384_21535	COG2731	YhcH YjgK YiaL family protein
FE384_21545	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FE384_21550	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
FE384_21555	COG0456	acetyltransferase
FE384_21560	COG4269	membrane
FE384_21565	COG0525	valine-tRNA ligase activity
FE384_21570	COG2927	DNA polymerase III (CHI subunit)
FE384_21580	COG0795	lipopolysaccharide-transporting ATPase activity
FE384_21585	COG0795	lipopolysaccharide-transporting ATPase activity
FE384_21590	COG0433	COG0433 Predicted ATPase
FE384_21595	COG1609	Transcriptional regulator
FE384_21600	COG2610	gluconate transmembrane transporter activity
FE384_21605	COG1028	Short-chain dehydrogenase reductase Sdr
FE384_21610	COG1063	alcohol dehydrogenase
FE384_21615	COG3265	gluconokinase activity
FE384_21620	COG1064	alcohol dehydrogenase
FE384_21655	COG3385	transposase activity
FE384_21665	COG0673	inositol 2-dehydrogenase activity
FE384_21690	COG2826	transposase and inactivated derivatives, IS30 family
FE384_21705	COG2085	NADP oxidoreductase coenzyme F420-dependent
FE384_21710	COG1120	ATPase activity
FE384_21715	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FE384_21720	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FE384_21725	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FE384_21730	COG4772	TonB-dependent receptor
FE384_21735	COG3712	iron ion homeostasis
FE384_21740	COG1595	DNA-templated transcription, initiation
FE384_21750	COG2390	Transcriptional regulator
FE384_21755	COG2610	gluconate transmembrane transporter activity
FE384_21760	COG0129	dihydroxy-acid dehydratase activity
FE384_21765	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FE384_21770	COG1414	Transcriptional regulator
FE384_21775	COG1349	DNA-binding transcription factor activity
FE384_21780	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FE384_21785	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FE384_21790	COG0434	BtpA family
FE384_21795	COG3775	system Galactitol-specific IIC component
FE384_21800	COG3414	Phosphotransferase system galactitol-specific IIB component
FE384_21805	COG1363	Peptidase, m42
FE384_21815	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FE384_21820	COG3153	acetyltransferase
FE384_21835	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FE384_21835	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FE384_21845	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
FE384_21850	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FE384_21855	COG0582	viral genome integration into host DNA
FE384_21860	COG4974	Belongs to the 'phage' integrase family
FE384_21865	COG3539	Fimbrial protein
FE384_21870	COG3539	Fimbrial protein
FE384_21875	COG3121	Chaperone
FE384_21880	COG3188	usher protein
FE384_21885	COG3539	Fimbrial protein
FE384_21890	COG3539	Fimbrial protein
FE384_21895	COG3539	Fimbrial protein
FE384_21900	COG2610	gluconate transmembrane transporter activity
FE384_21910	COG0246	Mannitol dehydrogenase
FE384_21915	COG2186	Transcriptional regulator
FE384_21935	COG0583	DNA-binding transcription factor activity
FE384_21940	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FE384_21945	COG0700	Nucleoside recognition
FE384_21950	COG3366	ferrous iron transmembrane transporter activity
FE384_21960	COG0477	Major facilitator Superfamily
FE384_21965	COG3204	pilus organization
FE384_21975	COG1924	4 iron, 4 sulfur cluster binding
FE384_21980	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
FE384_21985	COG2733	membrane
FE384_21990	COG2814	Major facilitator Superfamily
FE384_22000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FE384_22005	COG5457	Domain of unknown function (DUF1127)
FE384_22010	COG1196	nuclear chromosome segregation
FE384_22020	COG4268	DNA restriction-modification system
FE384_22025	COG1401	restriction endodeoxyribonuclease activity
FE384_22035	COG0732	type I restriction modification DNA specificity domain
FE384_22040	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FE384_22045	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
FE384_22050	COG1715	Restriction endonuclease
FE384_22055	COG0523	cobalamin synthesis protein
FE384_22060	COG2879	small protein
FE384_22065	COG1966	Carbon starvation protein
FE384_22070	COG0840	transmembrane signaling receptor activity
FE384_22075	COG2271	Major facilitator Superfamily
FE384_22080	COG1802	Transcriptional regulator
FE384_22085	COG1063	alcohol dehydrogenase
FE384_22100	COG1484	DNA-dependent DNA replication
FE384_22115	COG2966	Psort location CytoplasmicMembrane, score
FE384_22120	COG2197	response regulator
FE384_22125	COG2197	response regulator
FE384_22130	COG4114	ferric iron reductase
FE384_22160	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
FE384_22165	COG0456	acetyltransferase
FE384_22170	COG1011	Hydrolase
FE384_22180	COG2823	Periplasmic or secreted lipoprotein
FE384_22190	COG4667	esterase of the alpha-beta hydrolase superfamily
FE384_22195	COG0084	hydrolase, TatD family'
FE384_22200	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FE384_22205	COG1328	CTP reductase activity
FE384_22230	COG3550	peptidyl-serine autophosphorylation
FE384_22245	COG0560	Phosphoserine phosphatase
FE384_22250	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FE384_22255	COG3172	ATPase kinase involved in NAD metabolism
FE384_22255	COG1056	cytidyltransferase-related domain
FE384_22260	COG0488	(ABC) transporter
FE384_22265	COG0741	lytic transglycosylase activity
FE384_22285	COG3708	Transcriptional regulator
FE384_22285	COG2207	Transcriptional regulator
FE384_22290	COG3045	CreA protein
FE384_22295	COG0745	RESPONSE REGULATOR receiver
FE384_22300	COG2205	protein histidine kinase activity
FE384_22305	COG4452	Inner membrane protein CreD
FE384_22310	COG0745	RESPONSE REGULATOR receiver
FE384_22320	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA