locus-tag class description E3160_00005 PF00258 Flavodoxin E3160_00010 PF01037 Lrp/AsnC ligand binding domain E3160_00015 PF03590 Aspartate-ammonia ligase E3160_00020 PF05762 VWA domain containing CoxE-like protein E3160_00025 PF07728 AAA domain (dynein-related subfamily) E3160_00025 PF17868 AAA lid domain E3160_00025 PF12592 Protein of unknown function (DUF3763) E3160_00030 PF02705 K+ potassium transporter E3160_00035 PF05025 RbsD / FucU transport protein family E3160_00040 PF00005 ABC transporter E3160_00045 PF02653 Branched-chain amino acid transport system / permease component E3160_00050 PF13407 Periplasmic binding protein domain E3160_00055 PF00294 pfkB family carbohydrate kinase E3160_00060 PF00356 Bacterial regulatory proteins, lacI family E3160_00065 PF07690 Major Facilitator Superfamily E3160_00070 PF07729 FCD domain E3160_00070 PF00392 Bacterial regulatory proteins, gntR family E3160_00105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_00105 PF03466 LysR substrate binding domain E3160_00110 PF04219 Protein of unknown function, DUF E3160_00115 PF13335 Magnesium chelatase, subunit ChlI C-terminal E3160_00115 PF01078 Magnesium chelatase, subunit ChlI E3160_00120 PF08046 IlvGEDA operon leader peptide E3160_00130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3160_00130 PF00205 Thiamine pyrophosphate enzyme, central domain E3160_00130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_00140 PF01063 Amino-transferase class IV E3160_00145 PF00920 Dehydratase family E3160_00150 PF00291 Pyridoxal-phosphate dependent enzyme E3160_00150 PF00585 C-terminal regulatory domain of Threonine dehydratase E3160_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_00155 PF03466 LysR substrate binding domain E3160_00160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E3160_00160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E3160_00170 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system E3160_00175 PF00580 UvrD/REP helicase N-terminal domain E3160_00175 PF13361 UvrD-like helicase C-terminal domain E3160_00180 PF02541 Ppx/GppA phosphatase family E3160_00185 PF00270 DEAD/DEAH box helicase E3160_00185 PF00271 Helicase conserved C-terminal domain E3160_00190 PF00085 Thioredoxin E3160_00200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3160_00200 PF07498 Rho termination factor, N-terminal domain E3160_00200 PF07497 Rho termination factor, RNA-binding domain E3160_00205 PF00953 Glycosyl transferase family 4 E3160_00210 PF02706 Chain length determinant protein E3160_00215 PF02350 UDP-N-acetylglucosamine 2-epimerase E3160_00220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E3160_00220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E3160_00220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E3160_00225 PF16363 GDP-mannose 4,6 dehydratase E3160_00230 PF00483 Nucleotidyl transferase E3160_00240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3160_00245 PF01943 Polysaccharide biosynthesis protein E3160_00250 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 E3160_00255 PF06899 WzyE protein, O-antigen assembly polymerase E3160_00260 PF03808 Glycosyl transferase WecB/TagA/CpsF family E3160_00265 PF00324 Amino acid permease E3160_00300 PF13186 Iron-sulfur cluster-binding domain E3160_00300 PF04055 Radical SAM superfamily E3160_00305 PF00884 Sulfatase E3160_00310 PF07719 Tetratricopeptide repeat E3160_00310 PF07219 HemY protein N-terminus E3160_00315 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase E3160_00320 PF02602 Uroporphyrinogen-III synthase HemD E3160_00325 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E3160_00325 PF03900 Porphobilinogen deaminase, C-terminal domain E3160_00330 PF01295 Adenylate cyclase, class-I E3160_00330 PF12633 Adenylate cyclase NT domain E3160_00335 PF01491 Frataxin-like domain E3160_00345 PF13627 Prokaryotic lipoprotein-attachment site E3160_00350 PF01678 Diaminopimelate epimerase E3160_00355 PF04340 Protein of unknown function, DUF484 E3160_00360 PF00589 Phage integrase family E3160_00360 PF02899 Phage integrase, N-terminal SAM-like domain E3160_00365 PF13419 Haloacid dehalogenase-like hydrolase E3160_00370 PF13361 UvrD-like helicase C-terminal domain E3160_00370 PF00580 UvrD/REP helicase N-terminal domain E3160_00375 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase E3160_00380 PF09992 Phosphodiester glycosidase E3160_00385 PF01544 CorA-like Mg2+ transporter protein E3160_00400 PF01544 CorA-like Mg2+ transporter protein E3160_00415 PF00892 EamA-like transporter family E3160_00420 PF03061 Thioesterase superfamily E3160_00425 PF02253 Phospholipase A1 E3160_00430 PF09382 RQC domain E3160_00430 PF00570 HRDC domain E3160_00430 PF00270 DEAD/DEAH box helicase E3160_00430 PF16124 RecQ zinc-binding E3160_00430 PF00271 Helicase conserved C-terminal domain E3160_00435 PF01810 LysE type translocator E3160_00440 PF01810 LysE type translocator E3160_00445 PF12146 Serine aminopeptidase, S33 E3160_00455 PF00892 EamA-like transporter family E3160_00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_00460 PF03466 LysR substrate binding domain E3160_00465 PF08267 Cobalamin-independent synthase, N-terminal domain E3160_00465 PF01717 Cobalamin-independent synthase, Catalytic domain E3160_00470 PF01738 Dienelactone hydrolase family E3160_00475 PF01048 Phosphorylase superfamily E3160_00480 PF02646 RmuC family E3160_00485 PF01209 ubiE/COQ5 methyltransferase family E3160_00490 PF02036 SCP-2 sterol transfer family E3160_00495 PF03109 ABC1 family E3160_00500 PF02416 mttA/Hcf106 family E3160_00510 PF00902 Sec-independent protein translocase protein (TatC) E3160_00515 PF01026 TatD related DNase E3160_00520 PF02357 Transcription termination factor nusG E3160_00525 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E3160_00530 PF00175 Oxidoreductase NAD-binding domain E3160_00530 PF00970 Oxidoreductase FAD-binding domain E3160_00535 PF02803 Thiolase, C-terminal domain E3160_00535 PF00108 Thiolase, N-terminal domain E3160_00540 PF00378 Enoyl-CoA hydratase/isomerase E3160_00540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E3160_00540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E3160_00545 PF00557 Metallopeptidase family M24 E3160_00550 PF01205 Uncharacterized protein family UPF0029 E3160_00550 PF09186 Domain of unknown function (DUF1949) E3160_00555 PF02386 Cation transport protein E3160_00560 PF12724 Flavodoxin domain E3160_00590 PF03205 Molybdopterin guanine dinucleotide synthesis protein B E3160_00595 PF12804 MobA-like NTP transferase domain E3160_00600 PF06288 Protein of unknown function (DUF1040) E3160_00605 PF01636 Phosphotransferase enzyme family E3160_00610 PF01323 DSBA-like thioredoxin domain E3160_00615 PF06097 Bacterial protein of unknown function (DUF945) E3160_00620 PF01553 Acyltransferase E3160_00630 PF00476 DNA polymerase family A E3160_00630 PF01367 5'-3' exonuclease, C-terminal SAM fold E3160_00630 PF01612 3'-5' exonuclease E3160_00630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E3160_00635 PF01926 50S ribosome-binding GTPase E3160_00640 PF04220 Der GTPase activator (YihI) E3160_00645 PF06969 HemN C-terminal domain E3160_00645 PF04055 Radical SAM superfamily E3160_00655 PF00072 Response regulator receiver domain E3160_00655 PF00158 Sigma-54 interaction domain E3160_00655 PF02954 Bacterial regulatory protein, Fis family E3160_00660 PF00512 His Kinase A (phospho-acceptor) domain E3160_00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_00660 PF00989 PAS fold E3160_00665 PF00120 Glutamine synthetase, catalytic domain E3160_00665 PF03951 Glutamine synthetase, beta-Grasp domain E3160_00675 PF07702 UTRA domain E3160_00675 PF00392 Bacterial regulatory proteins, gntR family E3160_00680 PF01261 Xylose isomerase-like TIM barrel E3160_00685 PF07690 Major Facilitator Superfamily E3160_00690 PF06178 Oligogalacturonate-specific porin protein (KdgM) E3160_00705 PF01055 Glycosyl hydrolases family 31 E3160_00715 PF01263 Aldose 1-epimerase E3160_00725 PF01791 DeoC/LacD family aldolase E3160_00730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3160_00730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3160_00735 PF00294 pfkB family carbohydrate kinase E3160_00740 PF00455 DeoR C terminal sensor domain E3160_00740 PF08220 DeoR-like helix-turn-helix domain E3160_00745 PF13419 Haloacid dehalogenase-like hydrolase E3160_00750 PF03631 Virulence factor BrkB E3160_00755 PF02580 D-Tyr-tRNA(Tyr) deacylase E3160_00760 PF00583 Acetyltransferase (GNAT) family E3160_00760 PF09500 Putative thioesterase (yiiD_Cterm) E3160_00785 PF01402 Ribbon-helix-helix protein, copG family E3160_00795 PF04216 Protein involved in formate dehydrogenase formation E3160_00800 PF01292 Prokaryotic cytochrome b561 E3160_00805 PF13247 4Fe-4S dicluster domain E3160_00805 PF09163 Formate dehydrogenase N, transmembrane E3160_00815 PF02634 FdhD/NarQ family E3160_00820 PF12889 Protein of unknown function (DUF3829) E3160_00825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_00825 PF08279 HTH domain E3160_00830 PF05343 M42 glutamyl aminopeptidase E3160_00835 PF02378 Phosphotransferase system, EIIC E3160_00835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_00840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_00850 PF05336 L-rhamnose mutarotase E3160_00855 PF00596 Class II Aldolase and Adducin N-terminal domain E3160_00860 PF06134 L-rhamnose isomerase (RhaA) E3160_00865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3160_00865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3160_00870 PF02311 AraC-like ligand binding domain E3160_00870 PF12833 Helix-turn-helix domain E3160_00875 PF12833 Helix-turn-helix domain E3160_00875 PF02311 AraC-like ligand binding domain E3160_00880 PF12833 Helix-turn-helix domain E3160_00880 PF02311 AraC-like ligand binding domain E3160_00890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E3160_00890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E3160_00895 PF03812 2-keto-3-deoxygluconate permease E3160_00900 PF03475 3-alpha domain E3160_00900 PF03473 MOSC domain E3160_00905 PF00512 His Kinase A (phospho-acceptor) domain E3160_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_00905 PF00672 HAMP domain E3160_00905 PF16527 Two-component sensor protein CpxA, periplasmic domain E3160_00910 PF00072 Response regulator receiver domain E3160_00910 PF00486 Transcriptional regulatory protein, C terminal E3160_00915 PF07813 LTXXQ motif family protein E3160_00920 PF16916 Dimerisation domain of Zinc Transporter E3160_00920 PF01545 Cation efflux family E3160_00925 PF00365 Phosphofructokinase E3160_00935 PF02611 CDP-diacylglycerol pyrophosphatase E3160_00940 PF00121 Triosephosphate isomerase E3160_00945 PF07305 Protein of unknown function (DUF1454) E3160_00950 PF05656 Protein of unknown function (DUF805) E3160_00955 PF04175 Protein of unknown function (DUF406) E3160_00960 PF00582 Universal stress protein family E3160_00965 PF00175 Oxidoreductase NAD-binding domain E3160_00965 PF00970 Oxidoreductase FAD-binding domain E3160_00970 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E3160_00975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3160_00975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3160_00980 PF00230 Major intrinsic protein E3160_00985 PF06005 Cell division protein ZapB E3160_01000 PF03737 Aldolase/RraA E3160_01005 PF01040 UbiA prenyltransferase family E3160_01010 PF07724 AAA domain (Cdc48 subfamily) E3160_01010 PF00004 ATPase family associated with various cellular activities (AAA) E3160_01010 PF10431 C-terminal, D2-small domain, of ClpB protein E3160_01015 PF00227 Proteasome subunit E3160_01020 PF05036 Sporulation related domain E3160_01025 PF00356 Bacterial regulatory proteins, lacI family E3160_01030 PF18074 Primosomal protein N C-terminal domain E3160_01030 PF17764 3′ DNA-binding domain (3′BD) E3160_01030 PF00270 DEAD/DEAH box helicase E3160_01030 PF00271 Helicase conserved C-terminal domain E3160_01030 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E3160_01035 PF01197 Ribosomal protein L31 E3160_01040 PF05593 RHS Repeat E3160_01040 PF03527 RHS protein E3160_01040 PF14220 Domain of unknown function (DUF4329) E3160_01055 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family E3160_01060 PF01340 Met Apo-repressor, MetJ E3160_01065 PF01053 Cys/Met metabolism PLP-dependent enzyme E3160_01070 PF00696 Amino acid kinase family E3160_01070 PF00742 Homoserine dehydrogenase E3160_01070 PF03447 Homoserine dehydrogenase, NAD binding domain E3160_01075 PF02219 Methylenetetrahydrofolate reductase E3160_01080 PF00141 Peroxidase E3160_01085 PF00892 EamA-like transporter family E3160_01090 PF06940 Domain of unknown function (DUF1287) E3160_01095 PF00465 Iron-containing alcohol dehydrogenase E3160_01100 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3160_01105 PF05524 PEP-utilising enzyme, N-terminal E3160_01105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_01105 PF00391 PEP-utilising enzyme, mobile domain E3160_01105 PF02896 PEP-utilising enzyme, TIM barrel domain E3160_01105 PF00381 PTS HPr component phosphorylation site E3160_01115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_01120 PF02901 Pyruvate formate lyase-like E3160_01120 PF01228 Glycine radical E3160_01125 PF04055 Radical SAM superfamily E3160_01130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_01135 PF12833 Helix-turn-helix domain E3160_01140 PF00884 Sulfatase E3160_01145 PF00311 Phosphoenolpyruvate carboxylase E3160_01150 PF01546 Peptidase family M20/M25/M40 E3160_01150 PF07687 Peptidase dimerisation domain E3160_01155 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3160_01155 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3160_01160 PF00696 Amino acid kinase family E3160_01165 PF14698 Argininosuccinate lyase C-terminal E3160_01165 PF00206 Lyase E3160_01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_01170 PF03466 LysR substrate binding domain E3160_01175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3160_01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_01180 PF01546 Peptidase family M20/M25/M40 E3160_01180 PF07687 Peptidase dimerisation domain E3160_01185 PF07690 Major Facilitator Superfamily E3160_01190 PF00440 Bacterial regulatory proteins, tetR family E3160_01195 PF07226 Protein of unknown function (DUF1422) E3160_01200 PF05958 tRNA (Uracil-5-)-methyltransferase E3160_01205 PF00593 TonB dependent receptor E3160_01205 PF07715 TonB-dependent Receptor Plug Domain E3160_01210 PF01177 Asp/Glu/Hydantoin racemase E3160_01235 PF01565 FAD binding domain E3160_01235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E3160_01240 PF08279 HTH domain E3160_01240 PF03099 Biotin/lipoate A/B protein ligase family E3160_01240 PF02237 Biotin protein ligase C terminal domain E3160_01245 PF00485 Phosphoribulokinase / Uridine kinase family E3160_01270 PF00009 Elongation factor Tu GTP binding domain E3160_01270 PF03143 Elongation factor Tu C-terminal domain E3160_01270 PF03144 Elongation factor Tu domain 2 E3160_01275 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E3160_01280 PF00467 KOW motif E3160_01280 PF02357 Transcription termination factor nusG E3160_01285 PF00298 Ribosomal protein L11, RNA binding domain E3160_01285 PF03946 Ribosomal protein L11, N-terminal domain E3160_01290 PF00687 Ribosomal protein L1p/L10e family E3160_01295 PF00466 Ribosomal protein L10 E3160_01300 PF16320 Ribosomal protein L7/L12 dimerisation domain E3160_01300 PF00542 Ribosomal protein L7/L12 C-terminal domain E3160_01305 PF04561 RNA polymerase Rpb2, domain 2 E3160_01305 PF04565 RNA polymerase Rpb2, domain 3 E3160_01305 PF04563 RNA polymerase beta subunit E3160_01305 PF00562 RNA polymerase Rpb2, domain 6 E3160_01305 PF10385 RNA polymerase beta subunit external 1 domain E3160_01305 PF04560 RNA polymerase Rpb2, domain 7 E3160_01310 PF04997 RNA polymerase Rpb1, domain 1 E3160_01310 PF05000 RNA polymerase Rpb1, domain 4 E3160_01310 PF04983 RNA polymerase Rpb1, domain 3 E3160_01310 PF00623 RNA polymerase Rpb1, domain 2 E3160_01310 PF04998 RNA polymerase Rpb1, domain 5 E3160_01320 PF06968 Biotin and Thiamin Synthesis associated domain E3160_01320 PF04055 Radical SAM superfamily E3160_01325 PF05690 Thiazole biosynthesis protein ThiG E3160_01330 PF02597 ThiS family E3160_01335 PF00899 ThiF family E3160_01340 PF02581 Thiamine monophosphate synthase E3160_01345 PF01964 Radical SAM ThiC family E3160_01345 PF13667 ThiC-associated domain E3160_01350 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E3160_01355 PF09297 NADH pyrophosphatase zinc ribbon domain E3160_01355 PF00293 NUDIX domain E3160_01360 PF01208 Uroporphyrinogen decarboxylase (URO-D) E3160_01365 PF04493 Endonuclease V E3160_01370 PF04222 Protein of unknown function (DUF416) E3160_01375 PF00216 Bacterial DNA-binding protein E3160_01380 PF07356 Protein of unknown function (DUF1481) E3160_01385 PF13801 Heavy-metal resistance E3160_01390 PF00512 His Kinase A (phospho-acceptor) domain E3160_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_01395 PF00158 Sigma-54 interaction domain E3160_01395 PF00072 Response regulator receiver domain E3160_01395 PF02954 Bacterial regulatory protein, Fis family E3160_01400 PF02844 Phosphoribosylglycinamide synthetase, N domain E3160_01400 PF02843 Phosphoribosylglycinamide synthetase, C domain E3160_01400 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E3160_01405 PF01808 AICARFT/IMPCHase bienzyme E3160_01405 PF02142 MGS-like domain E3160_01430 PF13673 Acetyltransferase (GNAT) domain E3160_01435 PF04204 Homoserine O-succinyltransferase E3160_01440 PF01274 Malate synthase E3160_01445 PF00463 Isocitrate lyase family E3160_01450 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E3160_01455 PF07906 ShET2 enterotoxin, N-terminal region E3160_01460 PF09339 IclR helix-turn-helix domain E3160_01460 PF01614 Bacterial transcriptional regulator E3160_01465 PF02310 B12 binding domain E3160_01465 PF02965 Vitamin B12 dependent methionine synthase, activation domain E3160_01465 PF00809 Pterin binding enzyme E3160_01465 PF02574 Homocysteine S-methyltransferase E3160_01465 PF02607 B12 binding domain E3160_01470 PF02690 Na+/Pi-cotransporter E3160_01475 PF03575 Peptidase family S51 E3160_01480 PF00107 Zinc-binding dehydrogenase E3160_01480 PF08240 Alcohol dehydrogenase GroES-like domain E3160_01485 PF03613 PTS system mannose/fructose/sorbose family IID component E3160_01490 PF03609 PTS system sorbose-specific iic component E3160_01495 PF03830 PTS system sorbose subfamily IIB component E3160_01500 PF03610 PTS system fructose IIA component E3160_01505 PF00106 short chain dehydrogenase E3160_01510 PF04198 Putative sugar-binding domain E3160_01510 PF13936 Helix-turn-helix domain E3160_01515 PF00849 RNA pseudouridylate synthase E3160_01515 PF01479 S4 domain E3160_01520 PF11656 YjbD family (DUF3811) E3160_01525 PF01842 ACT domain E3160_01525 PF00696 Amino acid kinase family E3160_01535 PF00342 Phosphoglucose isomerase E3160_01540 PF11106 Exopolysaccharide production protein YjbE E3160_01545 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF E3160_01550 PF06251 Capsule biosynthesis GfcC E3160_01555 PF06082 Exopolysaccharide biosynthesis protein YbjH E3160_01560 PF17089 Uncharacterised protein family E3160_01565 PF06146 Phosphate-starvation-inducible E E3160_01570 PF00083 Sugar (and other) transporter E3160_01575 PF00528 Binding-protein-dependent transport system inner membrane component E3160_01580 PF14785 Maltose transport system permease protein MalF P2 domain E3160_01580 PF00528 Binding-protein-dependent transport system inner membrane component E3160_01585 PF01547 Bacterial extracellular solute-binding protein E3160_01590 PF17912 MalK OB fold domain E3160_01590 PF00005 ABC transporter E3160_01595 PF02264 LamB porin E3160_01600 PF07148 Maltose operon periplasmic protein precursor (MalM) E3160_01605 PF13981 SopA-like central domain E3160_01605 PF13599 Pentapeptide repeats (9 copies) E3160_01610 PF04345 Chorismate lyase E3160_01615 PF01040 UbiA prenyltransferase family E3160_01620 PF01553 Acyltransferase E3160_01625 PF01219 Prokaryotic diacylglycerol kinase E3160_01630 PF01726 LexA DNA binding domain E3160_01630 PF00717 Peptidase S24-like E3160_01635 PF01554 MatE E3160_01640 PF05532 CsbD-like E3160_01645 PF01475 Ferric uptake regulator family E3160_01650 PF10897 Protein of unknown function (DUF2713) E3160_01655 PF01207 Dihydrouridine synthase (Dus) E3160_01685 PF00717 Peptidase S24-like E3160_01690 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT E3160_01745 PF04971 Bacteriophage P21 holin S E3160_01750 PF00959 Phage lysozyme E3160_01755 PF06085 Lipoprotein Rz1 precursor E3160_01760 PF06069 PerC transcriptional activator E3160_01765 PF13132 Domain of unknown function (DUF3950) E3160_01865 PF06316 Enterobacterial Ail/Lom protein E3160_01870 PF03335 Phage tail fibre repeat E3160_01870 PF08400 Prophage tail fibre N-terminal E3160_01870 PF07484 Phage Tail Collar Domain E3160_01905 PF06183 DinI-like family E3160_01915 PF01207 Dihydrouridine synthase (Dus) E3160_01920 PF09583 Phage shock protein G (Phageshock_PspG) E3160_01925 PF00107 Zinc-binding dehydrogenase E3160_01925 PF08240 Alcohol dehydrogenase GroES-like domain E3160_01930 PF03796 DnaB-like helicase C terminal domain E3160_01930 PF00772 DnaB-like helicase N terminal domain E3160_01935 PF01168 Alanine racemase, N-terminal domain E3160_01935 PF00842 Alanine racemase, C-terminal domain E3160_01940 PF00155 Aminotransferase class I and II E3160_01950 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) E3160_01955 PF01894 Uncharacterised protein family UPF0047 E3160_01960 PF04237 YjbR E3160_01965 PF17760 UvrA interaction domain E3160_01965 PF17755 UvrA DNA-binding domain E3160_01965 PF00005 ABC transporter E3160_01970 PF00436 Single-strand binding protein family E3160_01975 PF15940 Family of unknown function E3160_01980 PF12792 CSS motif domain associated with EAL E3160_01980 PF00563 EAL domain E3160_01985 PF12833 Helix-turn-helix domain E3160_01990 PF09278 MerR, DNA binding E3160_01990 PF00376 MerR family regulatory protein E3160_01995 PF00860 Permease family E3160_02000 PF00999 Sodium/hydrogen exchanger family E3160_02005 PF00805 Pentapeptide repeats (8 copies) E3160_02010 PF00474 Sodium:solute symporter family E3160_02015 PF04341 Protein of unknown function, DUF485 E3160_02020 PF13193 AMP-binding enzyme C-terminal domain E3160_02020 PF00501 AMP-binding enzyme E3160_02020 PF16177 Acetyl-coenzyme A synthetase N-terminus E3160_02025 PF02335 Cytochrome c552 E3160_02030 PF13435 Cytochrome c554 and c-prime E3160_02030 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E3160_02035 PF13247 4Fe-4S dicluster domain E3160_02035 PF00037 4Fe-4S binding domain E3160_02040 PF03916 Polysulphide reductase, NrfD E3160_02045 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E3160_02045 PF01578 Cytochrome C assembly protein E3160_02050 PF03918 Cytochrome C biogenesis protein E3160_02060 PF00375 Sodium:dicarboxylate symporter family E3160_02065 PF08238 Sel1 repeat E3160_02080 PF02321 Outer membrane efflux protein E3160_02085 PF04632 Fusaric acid resistance protein family E3160_02090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_02090 PF00529 HlyD membrane-fusion protein of T1SS E3160_02095 PF17090 Uncharacterised protein family E3160_02100 PF14864 Alkyl sulfatase C-terminal E3160_02100 PF14863 Alkyl sulfatase dimerisation E3160_02100 PF00753 Metallo-beta-lactamase superfamily E3160_02105 PF00072 Response regulator receiver domain E3160_02105 PF00486 Transcriptional regulatory protein, C terminal E3160_02110 PF00294 pfkB family carbohydrate kinase E3160_02115 PF01116 Fructose-bisphosphate aldolase class-II E3160_02125 PF13407 Periplasmic binding protein domain E3160_02130 PF02653 Branched-chain amino acid transport system / permease component E3160_02135 PF00005 ABC transporter E3160_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_02145 PF08448 PAS fold E3160_02145 PF13188 PAS domain E3160_02145 PF00512 His Kinase A (phospho-acceptor) domain E3160_02145 PF00072 Response regulator receiver domain E3160_02155 PF12706 Beta-lactamase superfamily domain E3160_02160 PF00583 Acetyltransferase (GNAT) family E3160_02170 PF07969 Amidohydrolase family E3160_02175 PF00005 ABC transporter E3160_02180 PF00005 ABC transporter E3160_02185 PF06007 Phosphonate metabolism protein PhnJ E3160_02190 PF05861 Bacterial phosphonate metabolism protein (PhnI) E3160_02195 PF05845 Bacterial phosphonate metabolism protein (PhnH) E3160_02200 PF06754 Phosphonate metabolism protein PhnG E3160_02205 PF00392 Bacterial regulatory proteins, gntR family E3160_02205 PF07702 UTRA domain E3160_02210 PF00528 Binding-protein-dependent transport system inner membrane component E3160_02220 PF00005 ABC transporter E3160_02225 PF06983 3-demethylubiquinone-9 3-methyltransferase E3160_02230 PF03831 PhnA domain E3160_02230 PF08274 PhnA Zinc-Ribbon E3160_02235 PF00350 Dynamin family E3160_02240 PF13990 YjcZ-like protein E3160_02245 PF00083 Sugar (and other) transporter E3160_02245 PF08946 Osmosensory transporter coiled coil E3160_02255 PF00512 His Kinase A (phospho-acceptor) domain E3160_02255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_02260 PF00486 Transcriptional regulatory protein, C terminal E3160_02260 PF00072 Response regulator receiver domain E3160_02265 PF08019 Phosphoethanolamine transferase EptA/EptB E3160_02265 PF00884 Sulfatase E3160_02270 PF13520 Amino acid permease E3160_02275 PF12833 Helix-turn-helix domain E3160_02280 PF01276 Orn/Lys/Arg decarboxylase, major domain E3160_02280 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3160_02280 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3160_02285 PF12833 Helix-turn-helix domain E3160_02290 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3160_02290 PF02056 Family 4 glycosyl hydrolase E3160_02305 PF09997 Predicted membrane protein (DUF2238) E3160_02310 PF05681 Fumarate hydratase (Fumerase) E3160_02310 PF05683 Fumarase C-terminus E3160_02315 PF03605 Anaerobic c4-dicarboxylate membrane transporter E3160_02325 PF00072 Response regulator receiver domain E3160_02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_02330 PF00989 PAS fold E3160_02330 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3160_02330 PF17203 Single cache domain 3 E3160_02335 PF06902 Divergent 4Fe-4S mono-cluster E3160_02340 PF14542 GCN5-related N-acetyl-transferase E3160_02345 PF11080 Endoribonuclease GhoS E3160_02350 PF10753 Toxin GhoT_OrtT E3160_02355 PF01336 OB-fold nucleic acid binding domain E3160_02355 PF00152 tRNA synthetases class II (D, K and N) E3160_02360 PF00854 POT family E3160_02365 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3160_02365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3160_02365 PF01276 Orn/Lys/Arg decarboxylase, major domain E3160_02370 PF13520 Amino acid permease E3160_02380 PF18500 CadC C-terminal domain 1 E3160_02380 PF00486 Transcriptional regulatory protein, C terminal E3160_02395 PF02683 Cytochrome C biogenesis protein transmembrane region E3160_02395 PF11412 Disulphide bond corrector protein DsbC E3160_02400 PF03091 CutA1 divalent ion tolerance protein E3160_02405 PF03605 Anaerobic c4-dicarboxylate membrane transporter E3160_02410 PF00206 Lyase E3160_02410 PF10415 Fumarase C C-terminus E3160_02415 PF04186 FxsA cytoplasmic membrane protein E3160_02420 PF13520 Amino acid permease E3160_02425 PF00166 Chaperonin 10 Kd subunit E3160_02430 PF00118 TCP-1/cpn60 chaperonin family E3160_02435 PF13698 Domain of unknown function (DUF4156) E3160_02440 PF15922 YjeJ-like E3160_02445 PF04055 Radical SAM superfamily E3160_02450 PF09285 Elongation factor P, C-terminal E3160_02450 PF08207 Elongation factor P (EF-P) KOW-like domain E3160_02450 PF01132 Elongation factor P (EF-P) OB domain E3160_02455 PF08085 Entericidin EcnA/B family E3160_02460 PF08085 Entericidin EcnA/B family E3160_02465 PF00893 Small Multidrug Resistance protein E3160_02470 PF08212 Lipocalin-like domain E3160_02475 PF00144 Beta-lactamase E3160_02480 PF02313 Fumarate reductase subunit D E3160_02485 PF02300 Fumarate reductase subunit C E3160_02490 PF13085 2Fe-2S iron-sulfur cluster binding domain E3160_02490 PF13183 4Fe-4S dicluster domain E3160_02495 PF02910 Fumarate reductase flavoprotein C-term E3160_02495 PF00890 FAD binding domain E3160_02500 PF00152 tRNA synthetases class II (D, K and N) E3160_02505 PF13520 Amino acid permease E3160_02510 PF00924 Mechanosensitive ion channel E3160_02510 PF12795 Mechanosensitive ion channel porin domain E3160_02510 PF12794 Mechanosensitive ion channel inner membrane domain 1 E3160_02515 PF02666 Phosphatidylserine decarboxylase E3160_02520 PF03193 RsgA GTPase E3160_02525 PF00929 Exonuclease E3160_02550 PF08331 Domain of unknown function (DUF1730) E3160_02555 PF03853 YjeF-related protein N-terminus E3160_02555 PF01256 Carbohydrate kinase E3160_02560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E3160_02565 PF01520 N-acetylmuramoyl-L-alanine amidase E3160_02570 PF08676 MutL C terminal dimerisation domain E3160_02570 PF01119 DNA mismatch repair protein, C-terminal domain E3160_02580 PF17209 Hfq protein E3160_02585 PF13167 GTP-binding GTPase N-terminal E3160_02585 PF01926 50S ribosome-binding GTPase E3160_02585 PF16360 GTP-binding GTPase Middle Region E3160_02590 PF12221 Bacterial membrane protein N terminal E3160_02590 PF01145 SPFH domain / Band 7 family E3160_02595 PF01145 SPFH domain / Band 7 family E3160_02600 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) E3160_02605 PF00709 Adenylosuccinate synthetase E3160_02610 PF02082 Transcriptional regulator E3160_02615 PF17876 Cold shock domain E3160_02615 PF08461 Ribonuclease R winged-helix domain E3160_02615 PF08206 Ribonuclease B OB domain E3160_02615 PF00773 RNB domain E3160_02615 PF00575 S1 RNA binding domain E3160_02620 PF08032 RNA 2'-O ribose methyltransferase substrate binding E3160_02620 PF00588 SpoU rRNA Methylase family E3160_02625 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) E3160_02630 PF04012 PspA/IM30 family E3160_02635 PF10679 Protein of unknown function (DUF2491) E3160_02640 PF03994 Domain of Unknown Function (DUF350) E3160_02645 PF06693 Protein of unknown function (DUF1190) E3160_02650 PF03738 Glutathionylspermidine synthase preATP-grasp E3160_02655 PF18158 Adaptive response protein AidB N-terminal domain E3160_02655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3160_02655 PF02770 Acyl-CoA dehydrogenase, middle domain E3160_02660 PF07338 Protein of unknown function (DUF1471) E3160_02665 PF07338 Protein of unknown function (DUF1471) E3160_02670 PF00326 Prolyl oligopeptidase family E3160_02675 PF08220 DeoR-like helix-turn-helix domain E3160_02675 PF00455 DeoR C terminal sensor domain E3160_02685 PF03611 PTS system sugar-specific permease component E3160_02690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_02695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_02700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E3160_02705 PF01261 Xylose isomerase-like TIM barrel E3160_02710 PF00596 Class II Aldolase and Adducin N-terminal domain E3160_02715 PF07338 Protein of unknown function (DUF1471) E3160_02720 PF01250 Ribosomal protein S6 E3160_02725 PF00436 Single-strand binding protein family E3160_02730 PF01084 Ribosomal protein S18 E3160_02735 PF01281 Ribosomal protein L9, N-terminal domain E3160_02735 PF03948 Ribosomal protein L9, C-terminal domain E3160_02740 PF10887 Protein of unknown function (DUF2686) E3160_02750 PF01797 Transposase IS200 like E3160_02755 PF12323 Helix-turn-helix domain E3160_02755 PF01385 Probable transposase E3160_02755 PF07282 Putative transposase DNA-binding domain E3160_02765 PF04225 Opacity-associated protein A LysM-like domain E3160_02765 PF08525 Opacity-associated protein A N-terminal motif E3160_02770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3160_02770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E3160_02775 PF00324 Amino acid permease E3160_02780 PF01814 Hemerythrin HHE cation binding domain E3160_02780 PF04405 Domain of Unknown function (DUF542) E3160_02785 PF00892 EamA-like transporter family E3160_02790 PF05368 NmrA-like family E3160_02795 PF01638 HxlR-like helix-turn-helix E3160_02800 PF02872 5'-nucleotidase, C-terminal domain E3160_02800 PF00149 Calcineurin-like phosphoesterase E3160_02805 PF00459 Inositol monophosphatase family E3160_02815 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) E3160_02820 PF06526 Protein of unknown function (DUF1107) E3160_02825 PF03471 Transporter associated domain E3160_02825 PF01595 Cyclin M transmembrane N-terminal domain E3160_02825 PF00571 CBS domain E3160_02830 PF01625 Peptide methionine sulfoxide reductase E3160_02835 PF01103 Surface antigen E3160_02835 PF07244 Surface antigen variable number repeat E3160_02835 PF17243 POTRA domain TamA domain 1 E3160_02840 PF04357 TamB, inner membrane protein subunit of TAM complex E3160_02845 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like E3160_02850 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E3160_02855 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system E3160_02860 PF00719 Inorganic pyrophosphatase E3160_02865 PF13407 Periplasmic binding protein domain E3160_02870 PF00005 ABC transporter E3160_02875 PF02653 Branched-chain amino acid transport system / permease component E3160_02880 PF02653 Branched-chain amino acid transport system / permease component E3160_02885 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E3160_02890 PF01225 Mur ligase family, catalytic domain E3160_02890 PF02875 Mur ligase family, glutamate ligase domain E3160_02890 PF08245 Mur ligase middle domain E3160_02895 PF04751 Protein of unknown function (DUF615) E3160_02900 PF01523 Putative modulator of DNA gyrase E3160_02905 PF07361 Cytochrome b562 E3160_02915 PF13597 Anaerobic ribonucleoside-triphosphate reductase E3160_02915 PF03477 ATP cone domain E3160_02920 PF00128 Alpha amylase, catalytic domain E3160_02920 PF11941 Domain of unknown function (DUF3459) E3160_02925 PF00367 phosphotransferase system, EIIB E3160_02925 PF02378 Phosphotransferase system, EIIC E3160_02930 PF00356 Bacterial regulatory proteins, lacI family E3160_02935 PF17059 MgtA leader peptide E3160_02940 PF00690 Cation transporter/ATPase, N-terminus E3160_02940 PF00689 Cation transporting ATPase, C-terminus E3160_02945 PF01042 Endoribonuclease L-PSP E3160_02950 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E3160_02950 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E3160_02955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3160_02955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3160_02960 PF08052 PyrBI operon leader peptide E3160_02965 PF01042 Endoribonuclease L-PSP E3160_02975 PF00440 Bacterial regulatory proteins, tetR family E3160_02980 PF04074 YhcH/YjgK/YiaL E3160_02990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3160_02990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3160_02995 PF06877 Regulator of ribonuclease activity B E3160_03000 PF00583 Acetyltransferase (GNAT) family E3160_03005 PF05987 Bacterial protein of unknown function (DUF898) E3160_03010 PF00133 tRNA synthetases class I (I, L, M and V) E3160_03010 PF08264 Anticodon-binding domain of tRNA E3160_03010 PF10458 Valyl tRNA synthetase tRNA binding arm E3160_03015 PF04364 DNA polymerase III chi subunit, HolC E3160_03020 PF00883 Cytosol aminopeptidase family, catalytic domain E3160_03020 PF02789 Cytosol aminopeptidase family, N-terminal domain E3160_03025 PF03739 Lipopolysaccharide export system permease LptF/LptG E3160_03030 PF03739 Lipopolysaccharide export system permease LptF/LptG E3160_03035 PF05872 Bacterial protein of unknown function (DUF853) E3160_03040 PF00107 Zinc-binding dehydrogenase E3160_03040 PF08240 Alcohol dehydrogenase GroES-like domain E3160_03070 PF00239 Resolvase, N terminal domain E3160_03070 PF02796 Helix-turn-helix domain of resolvase E3160_03085 PF01381 Helix-turn-helix E3160_03090 PF13356 Arm DNA-binding domain E3160_03090 PF00589 Phage integrase family E3160_03135 PF18337 RapA N-terminal Tudor like domain E3160_03135 PF00176 SNF2 family N-terminal domain E3160_03135 PF00271 Helicase conserved C-terminal domain E3160_03135 PF12137 RNA polymerase recycling family C-terminal E3160_03135 PF18339 RapA N-terminal Tudor like domain 1 E3160_03145 PF00271 Helicase conserved C-terminal domain E3160_03145 PF00270 DEAD/DEAH box helicase E3160_03145 PF09369 Domain of unknown function (DUF1998) E3160_03150 PF13361 UvrD-like helicase C-terminal domain E3160_03150 PF00580 UvrD/REP helicase N-terminal domain E3160_03165 PF05717 IS66 Orf2 like protein E3160_03170 PF13007 Transposase C of IS166 homeodomain E3160_03170 PF13817 IS66 C-terminal element E3160_03170 PF03050 Transposase IS66 family E3160_03170 PF13005 zinc-finger binding domain of transposase IS66 E3160_03180 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase E3160_03190 PF06178 Oligogalacturonate-specific porin protein (KdgM) E3160_03195 PF00589 Phage integrase family E3160_03200 PF00589 Phage integrase family E3160_03210 PF00419 Fimbrial protein E3160_03215 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_03215 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_03220 PF00577 Outer membrane usher protein E3160_03220 PF13953 PapC C-terminal domain E3160_03220 PF13954 PapC N-terminal domain E3160_03225 PF00419 Fimbrial protein E3160_03235 PF09160 FimH, mannose binding E3160_03235 PF00419 Fimbrial protein E3160_03240 PF02447 GntP family permease E3160_03245 PF03786 D-mannonate dehydratase (UxuA) E3160_03250 PF08125 Mannitol dehydrogenase C-terminal domain E3160_03250 PF01232 Mannitol dehydrogenase Rossmann domain E3160_03255 PF07729 FCD domain E3160_03255 PF00392 Bacterial regulatory proteins, gntR family E3160_03260 PF10887 Protein of unknown function (DUF2686) E3160_03270 PF04965 Gene 25-like lysozyme E3160_03280 PF01979 Amidohydrolase family E3160_03285 PF07670 Nucleoside recognition E3160_03290 PF07670 Nucleoside recognition E3160_03300 PF06779 Uncharacterised MFS-type transporter YbfB E3160_03305 PF06977 SdiA-regulated E3160_03320 PF11823 Protein of unknown function (DUF3343) E3160_03325 PF01869 BadF/BadG/BcrA/BcrD ATPase family E3160_03330 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E3160_03335 PF04286 Protein of unknown function (DUF445) E3160_03340 PF07690 Major Facilitator Superfamily E3160_03355 PF00392 Bacterial regulatory proteins, gntR family E3160_03355 PF00155 Aminotransferase class I and II E3160_03360 PF06568 Domain of unknown function (DUF1127) E3160_03375 PF08845 Toxin SymE, type I toxin-antitoxin system E3160_03380 PF01420 Type I restriction modification DNA specificity domain E3160_03385 PF02384 N-6 DNA Methylase E3160_03385 PF12161 HsdM N-terminal domain E3160_03390 PF04851 Type III restriction enzyme, res subunit E3160_03390 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) E3160_03390 PF08463 EcoEI R protein C-terminal E3160_03390 PF00271 Helicase conserved C-terminal domain E3160_03405 PF07683 Cobalamin synthesis protein cobW C-terminal domain E3160_03405 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3160_03410 PF04328 Selenoprotein, putative E3160_03415 PF02554 Carbon starvation protein CstA E3160_03415 PF13722 5TM C-terminal transporter carbon starvation CstA E3160_03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3160_03425 PF02203 Tar ligand binding domain homologue E3160_03425 PF00672 HAMP domain E3160_03430 PF07690 Major Facilitator Superfamily E3160_03435 PF00392 Bacterial regulatory proteins, gntR family E3160_03435 PF07729 FCD domain E3160_03440 PF08240 Alcohol dehydrogenase GroES-like domain E3160_03440 PF00107 Zinc-binding dehydrogenase E3160_03445 PF00884 Sulfatase E3160_03450 PF10696 Protein of unknown function (DUF2501) E3160_03455 PF01695 IstB-like ATP binding protein E3160_03460 PF17948 DnaT DNA-binding domain E3160_03465 PF12821 Threonine/Serine exporter, ThrE E3160_03470 PF06738 Putative threonine/serine exporter E3160_03475 PF00196 Bacterial regulatory proteins, luxR family E3160_03480 PF00196 Bacterial regulatory proteins, luxR family E3160_03485 PF06276 Ferric iron reductase FhuF-like transporter E3160_03485 PF11575 FhuF 2Fe-2S C-terminal domain E3160_03490 PF07256 Protein of unknown function (DUF1435) E3160_03500 PF08468 Methyltransferase small domain N-terminal E3160_03500 PF05175 Methyltransferase small domain E3160_03505 PF03603 DNA polymerase III psi subunit E3160_03510 PF00583 Acetyltransferase (GNAT) family E3160_03515 PF13419 Haloacid dehalogenase-like hydrolase E3160_03520 PF16658 Class II release factor RF3, C-terminal domain E3160_03520 PF00009 Elongation factor Tu GTP binding domain E3160_03520 PF03144 Elongation factor Tu domain 2 E3160_03525 PF04972 BON domain E3160_03530 PF07043 Protein of unknown function (DUF1328) E3160_03535 PF01734 Patatin-like phospholipase E3160_03540 PF01026 TatD related DNase E3160_03545 PF04055 Radical SAM superfamily E3160_03555 PF01791 DeoC/LacD family aldolase E3160_03560 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E3160_03560 PF02885 Glycosyl transferase family, helical bundle domain E3160_03560 PF00591 Glycosyl transferase family, a/b domain E3160_03565 PF01676 Metalloenzyme superfamily E3160_03570 PF01048 Phosphorylase superfamily E3160_03580 PF03099 Biotin/lipoate A/B protein ligase family E3160_03580 PF10437 Bacterial lipoate protein ligase C-terminus E3160_03585 PF10144 Bacterial virulence factor haemolysin E3160_03590 PF18429 Domain of unknown function (DUF5609) E3160_03595 PF18073 Rubredoxin metal binding domain E3160_03600 PF13521 AAA domain E3160_03600 PF01381 Helix-turn-helix E3160_03605 PF00005 ABC transporter E3160_03605 PF12848 ABC transporter E3160_03610 PF01464 Transglycosylase SLT domain E3160_03610 PF14718 Soluble lytic murein transglycosylase L domain E3160_03615 PF01371 Trp repressor protein E3160_03620 PF01931 Protein of unknown function DUF84 E3160_03625 PF00300 Histidine phosphatase superfamily (branch 1) E3160_03630 PF06445 GyrI-like small molecule binding domain E3160_03630 PF12833 Helix-turn-helix domain E3160_03635 PF05981 CreA protein E3160_03640 PF00486 Transcriptional regulatory protein, C terminal E3160_03640 PF00072 Response regulator receiver domain E3160_03645 PF00672 HAMP domain E3160_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_03645 PF00512 His Kinase A (phospho-acceptor) domain E3160_03650 PF06123 Inner membrane protein CreD E3160_03655 PF00486 Transcriptional regulatory protein, C terminal E3160_03655 PF00072 Response regulator receiver domain E3160_03665 PF00588 SpoU rRNA Methylase family E3160_03675 PF00696 Amino acid kinase family E3160_03675 PF03447 Homoserine dehydrogenase, NAD binding domain E3160_03675 PF01842 ACT domain E3160_03675 PF13840 ACT domain E3160_03675 PF00742 Homoserine dehydrogenase E3160_03680 PF00288 GHMP kinases N terminal domain E3160_03680 PF08544 GHMP kinases C terminal E3160_03685 PF14821 Threonine synthase N terminus E3160_03685 PF00291 Pyridoxal-phosphate dependent enzyme E3160_03690 PF10697 Protein of unknown function (DUF2502) E3160_03695 PF03883 Peroxide stress protein YaaA E3160_03700 PF01235 Sodium:alanine symporter family E3160_03705 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3160_03710 PF00994 Probable molybdopterin binding domain E3160_03715 PF01184 GPR1/FUN34/yaaH family E3160_03720 PF03981 Ubiquinol-cytochrome C chaperone E3160_03720 PF13099 Domain of unknown function (DUF3944) E3160_03725 PF10807 Protein of unknown function (DUF2541) E3160_03730 PF00012 Hsp70 protein E3160_03735 PF01556 DnaJ C terminal domain E3160_03735 PF00226 DnaJ domain E3160_03735 PF00684 DnaJ central domain E3160_03740 PF01848 Hok/gef family E3160_03745 PF06965 Na+/H+ antiporter 1 E3160_03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_03750 PF03466 LysR substrate binding domain E3160_03760 PF13954 PapC N-terminal domain E3160_03760 PF00577 Outer membrane usher protein E3160_03760 PF13953 PapC C-terminal domain E3160_03765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_03765 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_03780 PF01649 Ribosomal protein S20 E3160_03785 PF10837 Protein of unknown function (DUF2575) E3160_03790 PF01687 Riboflavin kinase E3160_03790 PF06574 FAD synthetase E3160_03795 PF00133 tRNA synthetases class I (I, L, M and V) E3160_03795 PF06827 Zinc finger found in FPG and IleRS E3160_03795 PF08264 Anticodon-binding domain of tRNA E3160_03800 PF01252 Signal peptidase (SPase) II E3160_03805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3160_03810 PF02401 LytB protein E3160_03815 PF01156 Inosine-uridine preferring nucleoside hydrolase E3160_03820 PF05173 Dihydrodipicolinate reductase, C-terminus E3160_03820 PF01113 Dihydrodipicolinate reductase, N-terminus E3160_03825 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E3160_03825 PF00117 Glutamine amidotransferase class-I E3160_03830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3160_03830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E3160_03830 PF02142 MGS-like domain E3160_03835 PF07180 CaiF/GrlA transcriptional regulator E3160_03840 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_03845 PF00378 Enoyl-CoA hydratase/isomerase E3160_03850 PF00501 AMP-binding enzyme E3160_03850 PF13193 AMP-binding enzyme C-terminal domain E3160_03855 PF02515 CoA-transferase family III E3160_03860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3160_03860 PF02770 Acyl-CoA dehydrogenase, middle domain E3160_03860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3160_03865 PF02028 BCCT, betaine/carnitine/choline family transporter E3160_03870 PF01012 Electron transfer flavoprotein domain E3160_03875 PF00766 Electron transfer flavoprotein FAD-binding domain E3160_03875 PF01012 Electron transfer flavoprotein domain E3160_03880 PF01494 FAD binding domain E3160_03890 PF00083 Sugar (and other) transporter E3160_03895 PF02525 Flavodoxin-like fold E3160_03900 PF00999 Sodium/hydrogen exchanger family E3160_03900 PF02254 TrkA-N domain E3160_03905 PF00186 Dihydrofolate reductase E3160_03920 PF00149 Calcineurin-like phosphoesterase E3160_03925 PF04379 ApaG domain E3160_03930 PF00398 Ribosomal RNA adenine dimethylase E3160_03935 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E3160_03940 PF00639 PPIC-type PPIASE domain E3160_03940 PF09312 SurA N-terminal domain E3160_03945 PF03968 OstA-like protein E3160_03945 PF04453 LPS transport system D E3160_03950 PF05099 Tellurite resistance protein TerB E3160_03950 PF00226 DnaJ domain E3160_03965 PF00849 RNA pseudouridylate synthase E3160_03970 PF00271 Helicase conserved C-terminal domain E3160_03970 PF12137 RNA polymerase recycling family C-terminal E3160_03970 PF18337 RapA N-terminal Tudor like domain E3160_03970 PF18339 RapA N-terminal Tudor like domain 1 E3160_03970 PF00176 SNF2 family N-terminal domain E3160_03975 PF00136 DNA polymerase family B E3160_03975 PF03104 DNA polymerase family B, exonuclease domain E3160_03980 PF00596 Class II Aldolase and Adducin N-terminal domain E3160_03985 PF02610 L-arabinose isomerase E3160_03985 PF11762 L-arabinose isomerase C-terminal domain E3160_03990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3160_03995 PF02311 AraC-like ligand binding domain E3160_03995 PF12833 Helix-turn-helix domain E3160_04000 PF09335 SNARE associated Golgi protein E3160_04005 PF00005 ABC transporter E3160_04010 PF00528 Binding-protein-dependent transport system inner membrane component E3160_04035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_04035 PF12793 Sugar transport-related sRNA regulator N-term E3160_04045 PF00694 Aconitase C-terminal domain E3160_04050 PF00330 Aconitase family (aconitate hydratase) E3160_04055 PF00180 Isocitrate/isopropylmalate dehydrogenase E3160_04060 PF08502 LeuA allosteric (dimerisation) domain E3160_04060 PF00682 HMGL-like E3160_04065 PF08054 Leucine operon leader peptide E3160_04070 PF03466 LysR substrate binding domain E3160_04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_04075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_04075 PF00205 Thiamine pyrophosphate enzyme, central domain E3160_04075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3160_04080 PF10369 Small subunit of acetolactate synthase E3160_04090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3160_04090 PF00356 Bacterial regulatory proteins, lacI family E3160_04095 PF02381 MraZ protein, putative antitoxin-like E3160_04100 PF01795 MraW methylase family E3160_04105 PF04999 Cell division protein FtsL E3160_04110 PF00905 Penicillin binding protein transpeptidase domain E3160_04110 PF03717 Penicillin-binding Protein dimerisation domain E3160_04115 PF02875 Mur ligase family, glutamate ligase domain E3160_04115 PF08245 Mur ligase middle domain E3160_04115 PF01225 Mur ligase family, catalytic domain E3160_04120 PF01225 Mur ligase family, catalytic domain E3160_04120 PF08245 Mur ligase middle domain E3160_04120 PF02875 Mur ligase family, glutamate ligase domain E3160_04125 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E3160_04125 PF00953 Glycosyl transferase family 4 E3160_04130 PF02875 Mur ligase family, glutamate ligase domain E3160_04130 PF08245 Mur ligase middle domain E3160_04135 PF01098 Cell cycle protein E3160_04140 PF04101 Glycosyltransferase family 28 C-terminal domain E3160_04140 PF03033 Glycosyltransferase family 28 N-terminal domain E3160_04145 PF02875 Mur ligase family, glutamate ligase domain E3160_04145 PF08245 Mur ligase middle domain E3160_04145 PF01225 Mur ligase family, catalytic domain E3160_04150 PF07478 D-ala D-ala ligase C-terminus E3160_04150 PF01820 D-ala D-ala ligase N-terminus E3160_04155 PF03799 Cell division protein FtsQ E3160_04155 PF08478 POTRA domain, FtsQ-type E3160_04160 PF02491 SHS2 domain inserted in FTSA E3160_04165 PF12327 FtsZ family, C-terminal domain E3160_04165 PF00091 Tubulin/FtsZ family, GTPase domain E3160_04170 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E3160_04175 PF06558 Secretion monitor precursor protein (SecM) E3160_04180 PF07516 SecA Wing and Scaffold domain E3160_04180 PF02810 SEC-C motif E3160_04180 PF01043 SecA preprotein cross-linking domain E3160_04180 PF07517 SecA DEAD-like domain E3160_04185 PF00293 NUDIX domain E3160_04190 PF03884 DNA gyrase inhibitor YacG E3160_04195 PF07072 Cell division protein E3160_04200 PF01121 Dephospho-CoA kinase E3160_04205 PF00478 IMP dehydrogenase / GMP reductase domain E3160_04210 PF00482 Type II secretion system (T2SS), protein F E3160_04215 PF00437 Type II/IV secretion system protein E3160_04215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E3160_04220 PF07963 Prokaryotic N-terminal methylation motif E3160_04225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E3160_04225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E3160_04230 PF01510 N-acetylmuramoyl-L-alanine amidase E3160_04235 PF17113 Regulatory signalling modulator protein AmpE E3160_04240 PF00324 Amino acid permease E3160_04245 PF07729 FCD domain E3160_04245 PF00392 Bacterial regulatory proteins, gntR family E3160_04250 PF00456 Transketolase, thiamine diphosphate binding domain E3160_04250 PF17831 Pyruvate dehydrogenase E1 component middle domain E3160_04255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3160_04255 PF02817 e3 binding domain E3160_04255 PF00364 Biotin-requiring enzyme E3160_04260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3160_04260 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_04265 PF11737 Protein of unknown function (DUF3300) E3160_04270 PF00330 Aconitase family (aconitate hydratase) E3160_04270 PF06434 Aconitate hydratase 2 N-terminus E3160_04270 PF11791 Aconitate B N-terminal domain E3160_04275 PF06062 Uncharacterised protein family (UPF0231) E3160_04280 PF02675 S-adenosylmethionine decarboxylase E3160_04285 PF17284 Spermidine synthase tetramerisation domain E3160_04290 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) E3160_04295 PF00394 Multicopper oxidase E3160_04295 PF07731 Multicopper oxidase E3160_04295 PF07732 Multicopper oxidase E3160_04300 PF01011 PQQ enzyme repeat E3160_04305 PF00156 Phosphoribosyl transferase domain E3160_04310 PF00484 Carbonic anhydrase E3160_04315 PF00005 ABC transporter E3160_04320 PF01061 ABC-2 type transporter E3160_04325 PF03610 PTS system fructose IIA component E3160_04330 PF01522 Polysaccharide deacetylase E3160_04335 PF02261 Aspartate decarboxylase E3160_04340 PF04754 Putative transposase, YhgA-like E3160_04345 PF02569 Pantoate-beta-alanine ligase E3160_04350 PF02548 Ketopantoate hydroxymethyltransferase E3160_04365 PF00419 Fimbrial protein E3160_04370 PF00419 Fimbrial protein E3160_04375 PF13953 PapC C-terminal domain E3160_04375 PF13954 PapC N-terminal domain E3160_04375 PF00577 Outer membrane usher protein E3160_04380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_04380 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_04390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E3160_04395 PF12626 Polymerase A arginine-rich C-terminus E3160_04395 PF12627 Probable RNA and SrmB- binding site of polymerase A E3160_04395 PF01743 Poly A polymerase head domain E3160_04400 PF00749 tRNA synthetases class I (E and Q), catalytic domain E3160_04405 PF01258 Prokaryotic dksA/traR C4-type zinc finger E3160_04410 PF03749 Sugar fermentation stimulation protein RE domain E3160_04410 PF17746 SfsA N-terminal OB domain E3160_04415 PF02834 LigT like Phosphoesterase E3160_04420 PF08482 ATP-dependent helicase C-terminal E3160_04420 PF00270 DEAD/DEAH box helicase E3160_04420 PF04408 Helicase associated domain (HA2) E3160_04420 PF00271 Helicase conserved C-terminal domain E3160_04425 PF00905 Penicillin binding protein transpeptidase domain E3160_04425 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal E3160_04425 PF14814 Bifunctional transglycosylase second domain E3160_04425 PF00912 Transglycosylase E3160_04430 PF07715 TonB-dependent Receptor Plug Domain E3160_04430 PF00593 TonB dependent receptor E3160_04435 PF00005 ABC transporter E3160_04440 PF01497 Periplasmic binding protein E3160_04445 PF01032 FecCD transport family E3160_04450 PF00202 Aminotransferase class-III E3160_04455 PF00654 Voltage gated chloride channel E3160_04465 PF01521 Iron-sulphur cluster biosynthesis E3160_04470 PF03458 UPF0126 domain E3160_04475 PF01497 Periplasmic binding protein E3160_04480 PF01048 Phosphorylase superfamily E3160_04485 PF01966 HD domain E3160_04490 PF00595 PDZ domain E3160_04495 PF05651 Putative sugar diacid recognition E3160_04495 PF17853 GGDEF-like domain E3160_04495 PF13556 PucR C-terminal helix-turn-helix domain E3160_04500 PF11944 Protein of unknown function (DUF3461) E3160_04505 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E3160_04505 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_04505 PF14602 Hexapeptide repeat of succinyl-transferase E3160_04510 PF01909 Nucleotidyltransferase domain E3160_04510 PF01966 HD domain E3160_04510 PF01842 ACT domain E3160_04510 PF08335 GlnD PII-uridylyltransferase E3160_04515 PF00557 Metallopeptidase family M24 E3160_04520 PF00318 Ribosomal protein S2 E3160_04525 PF00889 Elongation factor TS E3160_04530 PF00696 Amino acid kinase family E3160_04535 PF01765 Ribosome recycling factor E3160_04540 PF13288 DXP reductoisomerase C-terminal domain E3160_04540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E3160_04540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E3160_04545 PF01255 Putative undecaprenyl diphosphate synthase E3160_04555 PF17820 PDZ domain E3160_04555 PF02163 Peptidase family M50 E3160_04560 PF01103 Surface antigen E3160_04560 PF07244 Surface antigen variable number repeat E3160_04565 PF03938 Outer membrane protein (OmpH-like) E3160_04570 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_04570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E3160_04575 PF07977 FabA-like domain E3160_04580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E3160_04580 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_04585 PF02684 Lipid-A-disaccharide synthetase E3160_04590 PF01351 Ribonuclease HII E3160_04595 PF01336 OB-fold nucleic acid binding domain E3160_04595 PF02811 PHP domain E3160_04595 PF07733 Bacterial DNA polymerase III alpha NTPase domain E3160_04595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E3160_04595 PF14579 Helix-hairpin-helix motif E3160_04600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E3160_04610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3160_04615 PF11734 TilS substrate C-terminal domain E3160_04615 PF09179 TilS substrate binding domain E3160_04615 PF01171 PP-loop family E3160_04620 PF07073 Modulator of Rho-dependent transcription termination (ROF) E3160_04625 PF06786 Uncharacterised protein family (UPF0253) E3160_04630 PF07152 YaeQ protein E3160_04635 PF00472 RF-1 domain E3160_04640 PF17185 NlpE C-terminal OB domain E3160_04640 PF04170 NlpE N-terminal domain E3160_04645 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family E3160_04650 PF04073 Aminoacyl-tRNA editing domain E3160_04650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3160_04650 PF03129 Anticodon binding domain E3160_04655 PF18389 TrmO C-terminal domain E3160_04655 PF01980 tRNA-methyltransferase O E3160_04660 PF16358 RcsF lipoprotein E3160_04665 PF03180 NLPA lipoprotein E3160_04670 PF00528 Binding-protein-dependent transport system inner membrane component E3160_04675 PF09383 NIL domain E3160_04675 PF00005 ABC transporter E3160_04715 PF00248 Aldo/keto reductase family E3160_04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_04720 PF03466 LysR substrate binding domain E3160_04725 PF03372 Endonuclease/Exonuclease/phosphatase family E3160_04730 PF08241 Methyltransferase domain E3160_04735 PF01464 Transglycosylase SLT domain E3160_04735 PF01476 LysM domain E3160_04740 PF00753 Metallo-beta-lactamase superfamily E3160_04740 PF16123 Hydroxyacylglutathione hydrolase C-terminus E3160_04745 PF08241 Methyltransferase domain E3160_04750 PF00075 RNase H E3160_04755 PF00929 Exonuclease E3160_04815 PF17871 AAA lid domain E3160_04815 PF07724 AAA domain (Cdc48 subfamily) E3160_04815 PF10431 C-terminal, D2-small domain, of ClpB protein E3160_04815 PF00004 ATPase family associated with various cellular activities (AAA) E3160_04870 PF05638 Type VI secretion system effector, Hcp E3160_04875 PF04717 Type VI secretion system, phage-baseplate injector E3160_04880 PF14220 Domain of unknown function (DUF4329) E3160_04880 PF05593 RHS Repeat E3160_04880 PF03527 RHS protein E3160_04890 PF05593 RHS Repeat E3160_04890 PF03527 RHS protein E3160_04890 PF14220 Domain of unknown function (DUF4329) E3160_04905 PF13808 DDE_Tnp_1-associated E3160_04905 PF01609 Transposase DDE domain E3160_04910 PF03527 RHS protein E3160_04925 PF01609 Transposase DDE domain E3160_04925 PF13808 DDE_Tnp_1-associated E3160_04930 PF00795 Carbon-nitrogen hydrolase E3160_04940 PF09317 Domain of unknown function (DUF1974) E3160_04940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3160_04940 PF02770 Acyl-CoA dehydrogenase, middle domain E3160_04940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3160_04945 PF13580 SIS domain E3160_04950 PF13230 Glutamine amidotransferases class-II E3160_04955 PF03734 L,D-transpeptidase catalytic domain E3160_04960 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ E3160_04965 PF04221 RelB antitoxin E3160_04970 PF00877 NlpC/P60 family E3160_04980 PF00771 FHIPEP family E3160_04985 PF00691 OmpA family E3160_04985 PF13677 Membrane MotB of proton-channel complex MotA/MotB E3160_04990 PF11799 impB/mucB/samB family C-terminal domain E3160_04990 PF00817 impB/mucB/samB family E3160_04990 PF11798 IMS family HHH motif E3160_05000 PF13957 Toxin YafO, type II toxin-antitoxin system E3160_05005 PF13673 Acetyltransferase (GNAT) domain E3160_05015 PF00472 RF-1 domain E3160_05020 PF01546 Peptidase family M20/M25/M40 E3160_05020 PF07687 Peptidase dimerisation domain E3160_05025 PF00156 Phosphoribosyl transferase domain E3160_05030 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) E3160_05035 PF07417 Sigma factor-binding transcriptional regulator Crl E3160_05040 PF00267 Gram-negative porin E3160_05045 PF01472 PUA domain E3160_05045 PF00696 Amino acid kinase family E3160_05050 PF00171 Aldehyde dehydrogenase family E3160_05070 PF13356 Arm DNA-binding domain E3160_05070 PF14659 Phage integrase, N-terminal SAM-like domain E3160_05070 PF00589 Phage integrase family E3160_05125 PF17345 Family of unknown function (DUF5375) E3160_05140 PF03466 LysR substrate binding domain E3160_05145 PF00106 short chain dehydrogenase E3160_05160 PF03466 LysR substrate binding domain E3160_05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_05165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) E3160_05170 PF07690 Major Facilitator Superfamily E3160_05175 PF13478 XdhC Rossmann domain E3160_05175 PF02625 XdhC and CoxI family E3160_05180 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E3160_05180 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E3160_05190 PF01799 [2Fe-2S] binding domain E3160_05190 PF00111 2Fe-2S iron-sulfur cluster binding domain E3160_05190 PF10518 TAT (twin-arginine translocation) pathway signal sequence E3160_05195 PF07274 Protein of unknown function (DUF1440) E3160_05200 PF03692 Putative zinc- or iron-chelating domain E3160_05205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_05215 PF16967 E-set like domain E3160_05215 PF15976 CS1-pili formation C-terminal E3160_05220 PF18649 EcpB C-terminal domain E3160_05225 PF16449 Fimbrillin MatB E3160_05230 PF00196 Bacterial regulatory proteins, luxR family E3160_05245 PF00444 Ribosomal protein L36 E3160_05250 PF01197 Ribosomal protein L31 E3160_05260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E3160_05265 PF12146 Serine aminopeptidase, S33 E3160_05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_05270 PF03466 LysR substrate binding domain E3160_05275 PF03050 Transposase IS66 family E3160_05275 PF13005 zinc-finger binding domain of transposase IS66 E3160_05275 PF13817 IS66 C-terminal element E3160_05275 PF13007 Transposase C of IS166 homeodomain E3160_05280 PF05717 IS66 Orf2 like protein E3160_05310 PF12833 Helix-turn-helix domain E3160_05315 PF00248 Aldo/keto reductase family E3160_05320 PF04224 Protein of unknown function, DUF417 E3160_05325 PF07338 Protein of unknown function (DUF1471) E3160_05330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3160_05330 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_05335 PF12852 Cupin E3160_05335 PF12833 Helix-turn-helix domain E3160_05340 PF02754 Cysteine-rich domain E3160_05345 PF02589 LUD domain E3160_05345 PF11870 Domain of unknown function (DUF3390) E3160_05345 PF13183 4Fe-4S dicluster domain E3160_05350 PF02589 LUD domain E3160_05365 PF03797 Autotransporter beta-domain E3160_05365 PF03212 Pertactin E3160_05390 PF00732 GMC oxidoreductase E3160_05390 PF05199 GMC oxidoreductase E3160_05395 PF00171 Aldehyde dehydrogenase family E3160_05400 PF00440 Bacterial regulatory proteins, tetR family E3160_05400 PF13977 BetI-type transcriptional repressor, C-terminal E3160_05405 PF02028 BCCT, betaine/carnitine/choline family transporter E3160_05410 PF03797 Autotransporter beta-domain E3160_05415 PF00563 EAL domain E3160_05415 PF00196 Bacterial regulatory proteins, luxR family E3160_05430 PF12796 Ankyrin repeats (3 copies) E3160_05435 PF11392 Protein of unknown function (DUF2877) E3160_05440 PF00549 CoA-ligase E3160_05440 PF02629 CoA binding domain E3160_05445 PF06545 Protein of unknown function (DUF1116) E3160_05455 PF00696 Amino acid kinase family E3160_05460 PF07969 Amidohydrolase family E3160_05470 PF13407 Periplasmic binding protein domain E3160_05475 PF00005 ABC transporter E3160_05480 PF02653 Branched-chain amino acid transport system / permease component E3160_05485 PF02653 Branched-chain amino acid transport system / permease component E3160_05490 PF08240 Alcohol dehydrogenase GroES-like domain E3160_05490 PF00107 Zinc-binding dehydrogenase E3160_05505 PF01810 LysE type translocator E3160_05510 PF07338 Protein of unknown function (DUF1471) E3160_05515 PF02954 Bacterial regulatory protein, Fis family E3160_05515 PF06506 Propionate catabolism activator E3160_05515 PF00158 Sigma-54 interaction domain E3160_05525 PF00285 Citrate synthase, C-terminal domain E3160_05530 PF03972 MmgE/PrpD family E3160_05535 PF00501 AMP-binding enzyme E3160_05535 PF16177 Acetyl-coenzyme A synthetase N-terminus E3160_05535 PF13193 AMP-binding enzyme C-terminal domain E3160_05540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E3160_05545 PF07969 Amidohydrolase family E3160_05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_05550 PF03466 LysR substrate binding domain E3160_05555 PF00484 Carbonic anhydrase E3160_05560 PF02560 Cyanate lyase C-terminal domain E3160_05565 PF07690 Major Facilitator Superfamily E3160_05570 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_05570 PF12464 Maltose acetyltransferase E3160_05575 PF01306 LacY proton/sugar symporter E3160_05580 PF02837 Glycosyl hydrolases family 2, sugar binding domain E3160_05580 PF02929 Beta galactosidase small chain E3160_05580 PF16353 Domain of unknown function(DUF4981) E3160_05580 PF00703 Glycosyl hydrolases family 2 E3160_05580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E3160_05585 PF00356 Bacterial regulatory proteins, lacI family E3160_05595 PF12706 Beta-lactamase superfamily domain E3160_05600 PF09339 IclR helix-turn-helix domain E3160_05600 PF01614 Bacterial transcriptional regulator E3160_05605 PF01494 FAD binding domain E3160_05610 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E3160_05615 PF12697 Alpha/beta hydrolase family E3160_05620 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3160_05625 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation E3160_05625 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3160_05630 PF00682 HMGL-like E3160_05630 PF07836 DmpG-like communication domain E3160_05635 PF07690 Major Facilitator Superfamily E3160_05640 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) E3160_05645 PF00756 Putative esterase E3160_05650 PF08240 Alcohol dehydrogenase GroES-like domain E3160_05650 PF00107 Zinc-binding dehydrogenase E3160_05655 PF02583 Metal-sensitive transcriptional repressor E3160_05660 PF00005 ABC transporter E3160_05660 PF08402 TOBE domain E3160_05665 PF00528 Binding-protein-dependent transport system inner membrane component E3160_05675 PF07690 Major Facilitator Superfamily E3160_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_05680 PF07730 Histidine kinase E3160_05680 PF05231 MASE1 E3160_05685 PF00072 Response regulator receiver domain E3160_05685 PF00196 Bacterial regulatory proteins, luxR family E3160_05690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3160_05695 PF00005 ABC transporter E3160_05700 PF00528 Binding-protein-dependent transport system inner membrane component E3160_05705 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E3160_05710 PF00490 Delta-aminolevulinic acid dehydratase E3160_05715 PF03797 Autotransporter beta-domain E3160_05715 PF03212 Pertactin E3160_05720 PF15977 Winged helix-turn-helix DNA binding E3160_05725 PF00144 Beta-lactamase E3160_05730 PF05992 SbmA/BacA-like family E3160_05735 PF07759 Protein of unknown function (DUF1615) E3160_05740 PF10954 Protein of unknown function (DUF2755) E3160_05745 PF10953 Protein of unknown function (DUF2754) E3160_05750 PF01820 D-ala D-ala ligase N-terminus E3160_05750 PF07478 D-ala D-ala ligase C-terminus E3160_05755 PF10796 Sigma-S stabilisation anti-adaptor protein E3160_05760 PF00245 Alkaline phosphatase E3160_05765 PF07769 psiF repeat E3160_05770 PF00990 Diguanylate cyclase, GGDEF domain E3160_05770 PF05230 MASE2 domain E3160_05775 PF03807 NADP oxidoreductase coenzyme F420-dependent E3160_05775 PF14748 Pyrroline-5-carboxylate reductase dimerisation E3160_05780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E3160_05785 PF01202 Shikimate kinase E3160_05790 PF16362 YaiA protein E3160_05795 PF07302 AroM protein E3160_05800 PF06865 Pyrimidine/purine nucleoside phosphorylase E3160_05805 PF10971 Protein of unknown function (DUF2773) E3160_05815 PF04381 Putative exonuclease, RdgC E3160_05820 PF00480 ROK family E3160_05825 PF07690 Major Facilitator Superfamily E3160_05830 PF13476 AAA domain E3160_05835 PF12320 Type 5 capsule protein repressor C-terminal domain E3160_05835 PF00149 Calcineurin-like phosphoesterase E3160_05840 PF00072 Response regulator receiver domain E3160_05840 PF00486 Transcriptional regulatory protein, C terminal E3160_05845 PF00512 His Kinase A (phospho-acceptor) domain E3160_05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_05845 PF11808 Phosphate regulon sensor protein PhoR E3160_05845 PF00989 PAS fold E3160_05850 PF05525 Branched-chain amino acid transport protein E3160_05855 PF00324 Amino acid permease E3160_05860 PF02903 Alpha amylase, N-terminal ig-like domain E3160_05860 PF00128 Alpha amylase, catalytic domain E3160_05870 PF04336 Acyl carrier protein phosphodiesterase E3160_05875 PF02547 Queuosine biosynthesis protein E3160_05880 PF01702 Queuine tRNA-ribosyltransferase E3160_05885 PF02699 Preprotein translocase subunit E3160_05890 PF07549 SecD/SecF GG Motif E3160_05890 PF13721 SecD export protein N-terminal TM region E3160_05890 PF02355 Protein export membrane protein E3160_05895 PF02355 Protein export membrane protein E3160_05895 PF07549 SecD/SecF GG Motif E3160_05900 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH E3160_05910 PF01844 HNH endonuclease E3160_05915 PF03502 Nucleoside-specific channel-forming protein, Tsx E3160_05920 PF11622 Protein of unknown function (DUF3251) E3160_05925 PF03477 ATP cone domain E3160_05930 PF01872 RibD C-terminal domain E3160_05930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E3160_05935 PF00885 6,7-dimethyl-8-ribityllumazine synthase E3160_05940 PF01029 NusB family E3160_05945 PF00586 AIR synthase related protein, N-terminal domain E3160_05945 PF02769 AIR synthase related protein, C-terminal domain E3160_05950 PF04608 Phosphatidylglycerophosphatase A E3160_05960 PF00248 Aldo/keto reductase family E3160_05965 PF02780 Transketolase, C-terminal domain E3160_05965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E3160_05965 PF02779 Transketolase, pyrimidine binding domain E3160_05970 PF00348 Polyprenyl synthetase E3160_05975 PF02609 Exonuclease VII small subunit E3160_05980 PF02568 Thiamine biosynthesis protein (ThiI) E3160_05980 PF02926 THUMP domain E3160_05985 PF01965 DJ-1/PfpI family E3160_05990 PF08546 Ketopantoate reductase PanE/ApbA C terminal E3160_05990 PF02558 Ketopantoate reductase PanE/ApbA E3160_05995 PF04461 Protein of unknown function (DUF520) E3160_06000 PF07690 Major Facilitator Superfamily E3160_06005 PF01040 UbiA prenyltransferase family E3160_06010 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E3160_06015 PF00510 Cytochrome c oxidase subunit III E3160_06020 PF00115 Cytochrome C and Quinol oxidase polypeptide I E3160_06025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E3160_06025 PF06481 COX Aromatic Rich Motif E3160_06030 PF07690 Major Facilitator Superfamily E3160_06035 PF08139 Prokaryotic membrane lipoprotein lipid attachment site E3160_06035 PF03923 Uncharacterized lipoprotein E3160_06040 PF01722 BolA-like protein E3160_06045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3160_06045 PF05698 Bacterial trigger factor protein (TF) C-terminus E3160_06045 PF05697 Bacterial trigger factor protein (TF) E3160_06050 PF00574 Clp protease E3160_06055 PF06689 ClpX C4-type zinc finger E3160_06055 PF07724 AAA domain (Cdc48 subfamily) E3160_06055 PF10431 C-terminal, D2-small domain, of ClpB protein E3160_06060 PF00004 ATPase family associated with various cellular activities (AAA) E3160_06060 PF05362 Lon protease (S16) C-terminal proteolytic domain E3160_06060 PF02190 ATP-dependent protease La (LON) substrate-binding domain E3160_06065 PF00216 Bacterial DNA-binding protein E3160_06070 PF13145 PPIC-type PPIASE domain E3160_06085 PF06508 Queuosine biosynthesis protein QueC E3160_06090 PF12793 Sugar transport-related sRNA regulator N-term E3160_06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_06100 PF13404 AsnC-type helix-turn-helix domain E3160_06100 PF01037 Lrp/AsnC ligand binding domain E3160_06105 PF00664 ABC transporter transmembrane region E3160_06105 PF00005 ABC transporter E3160_06110 PF00664 ABC transporter transmembrane region E3160_06110 PF00005 ABC transporter E3160_06115 PF00543 Nitrogen regulatory protein P-II E3160_06120 PF00909 Ammonium Transporter Family E3160_06130 PF09619 Type III secretion system lipoprotein chaperone (YscW) E3160_06135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3160_06145 PF07237 Protein of unknown function (DUF1428) E3160_06150 PF00563 EAL domain E3160_06150 PF12792 CSS motif domain associated with EAL E3160_06155 PF10777 Inner membrane protein YlaC E3160_06160 PF12464 Maltose acetyltransferase E3160_06160 PF14602 Hexapeptide repeat of succinyl-transferase E3160_06165 PF05321 Haemolysin expression modulating protein E3160_06170 PF10757 Biofilm formation regulator YbaJ E3160_06175 PF00873 AcrB/AcrD/AcrF family E3160_06180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_06180 PF00529 HlyD membrane-fusion protein of T1SS E3160_06185 PF08361 MAATS-type transcriptional repressor, C-terminal region E3160_06185 PF00440 Bacterial regulatory proteins, tetR family E3160_06190 PF12794 Mechanosensitive ion channel inner membrane domain 1 E3160_06190 PF12795 Mechanosensitive ion channel porin domain E3160_06190 PF00924 Mechanosensitive ion channel E3160_06195 PF10689 Protein of unknown function (DUF2496) E3160_06200 PF07445 Primosomal replication protein priC E3160_06205 PF04304 Protein of unknown function (DUF454) E3160_06210 PF00156 Phosphoribosyl transferase domain E3160_06215 PF12170 DNA polymerase III tau subunit V interacting with alpha E3160_06215 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E3160_06215 PF12169 DNA polymerase III subunits gamma and tau domain III E3160_06220 PF02575 YbaB/EbfC DNA-binding family E3160_06225 PF02132 RecR protein E3160_06225 PF13662 Toprim domain E3160_06230 PF00183 Hsp90 protein E3160_06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_06235 PF05191 Adenylate kinase, active site lid E3160_06240 PF00762 Ferrochelatase E3160_06245 PF07859 alpha/beta hydrolase fold E3160_06250 PF00294 pfkB family carbohydrate kinase E3160_06255 PF00999 Sodium/hydrogen exchanger family E3160_06255 PF02254 TrkA-N domain E3160_06260 PF07690 Major Facilitator Superfamily E3160_06265 PF02872 5'-nucleotidase, C-terminal domain E3160_06265 PF00149 Calcineurin-like phosphoesterase E3160_06270 PF04073 Aminoacyl-tRNA editing domain E3160_06275 PF01963 TraB family E3160_06285 PF01381 Helix-turn-helix E3160_06290 PF00403 Heavy-metal-associated domain E3160_06295 PF04960 Glutaminase E3160_06300 PF13520 Amino acid permease E3160_06320 PF00664 ABC transporter transmembrane region E3160_06320 PF03412 Peptidase C39 family E3160_06320 PF00005 ABC transporter E3160_06325 PF00529 HlyD membrane-fusion protein of T1SS E3160_06330 PF13411 MerR HTH family regulatory protein E3160_06355 PF01957 NfeD-like C-terminal, partner-binding E3160_06360 PF16200 C-terminal region of band_7 E3160_06360 PF01145 SPFH domain / Band 7 family E3160_06365 PF00005 ABC transporter E3160_06370 PF03649 Uncharacterised protein family (UPF0014) E3160_06375 PF00085 Thioredoxin E3160_06380 PF00106 short chain dehydrogenase E3160_06385 PF13472 GDSL-like Lipase/Acylhydrolase family E3160_06390 PF00005 ABC transporter E3160_06400 PF14220 Domain of unknown function (DUF4329) E3160_06400 PF03527 RHS protein E3160_06400 PF05593 RHS Repeat E3160_06420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_06420 PF03466 LysR substrate binding domain E3160_06425 PF04115 Ureidoglycolate lyase E3160_06430 PF01614 Bacterial transcriptional regulator E3160_06430 PF09339 IclR helix-turn-helix domain E3160_06435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_06435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3160_06435 PF00205 Thiamine pyrophosphate enzyme, central domain E3160_06440 PF01261 Xylose isomerase-like TIM barrel E3160_06445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3160_06445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3160_06450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E3160_06455 PF01979 Amidohydrolase family E3160_06460 PF00860 Permease family E3160_06465 PF02595 Glycerate kinase family E3160_06470 PF07883 Cupin domain E3160_06470 PF05899 Protein of unknown function (DUF861) E3160_06475 PF01546 Peptidase family M20/M25/M40 E3160_06480 PF02615 Malate/L-lactate dehydrogenase E3160_06485 PF02629 CoA binding domain E3160_06485 PF00549 CoA-ligase E3160_06490 PF06545 Protein of unknown function (DUF1116) E3160_06495 PF11392 Protein of unknown function (DUF2877) E3160_06500 PF00696 Amino acid kinase family E3160_06505 PF02222 ATP-grasp domain E3160_06505 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E3160_06510 PF00731 AIR carboxylase E3160_06515 PF00149 Calcineurin-like phosphoesterase E3160_06520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E3160_06525 PF01406 tRNA synthetases class I (C) catalytic domain E3160_06525 PF09190 DALR domain E3160_06530 PF04307 LexA-binding, inner membrane-associated putative hydrolase E3160_06540 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E3160_06540 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E3160_06545 PF00419 Fimbrial protein E3160_06550 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_06550 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_06555 PF13954 PapC N-terminal domain E3160_06555 PF00577 Outer membrane usher protein E3160_06555 PF13953 PapC C-terminal domain E3160_06560 PF00419 Fimbrial protein E3160_06565 PF00419 Fimbrial protein E3160_06570 PF00196 Bacterial regulatory proteins, luxR family E3160_06570 PF00072 Response regulator receiver domain E3160_06580 PF12833 Helix-turn-helix domain E3160_06585 PF14488 Domain of unknown function (DUF4434) E3160_06590 PF13283 Bacteriophage N adsorption protein A C-term E3160_06600 PF13808 DDE_Tnp_1-associated E3160_06600 PF01609 Transposase DDE domain E3160_06610 PF05488 PAAR motif E3160_06610 PF05593 RHS Repeat E3160_06625 PF05488 PAAR motif E3160_06625 PF05593 RHS Repeat E3160_06650 PF04717 Type VI secretion system, phage-baseplate injector E3160_06655 PF00512 His Kinase A (phospho-acceptor) domain E3160_06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_06655 PF00672 HAMP domain E3160_06660 PF00072 Response regulator receiver domain E3160_06660 PF00486 Transcriptional regulatory protein, C terminal E3160_06665 PF02321 Outer membrane efflux protein E3160_06670 PF11604 Copper binding periplasmic protein CusF E3160_06675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_06675 PF00529 HlyD membrane-fusion protein of T1SS E3160_06680 PF00873 AcrB/AcrD/AcrF family E3160_06685 PF00324 Amino acid permease E3160_06690 PF00924 Mechanosensitive ion channel E3160_06695 PF00881 Nitroreductase family E3160_06700 PF04237 YjbR E3160_06705 PF06643 Protein of unknown function (DUF1158) E3160_06710 PF04107 Glutamate-cysteine ligase family 2(GCS2) E3160_06720 PF01848 Hok/gef family E3160_06730 PF01848 Hok/gef family E3160_06735 PF17837 4'-phosphopantetheinyl transferase N-terminal domain E3160_06735 PF01648 4'-phosphopantetheinyl transferase superfamily E3160_06740 PF07715 TonB-dependent Receptor Plug Domain E3160_06740 PF00593 TonB dependent receptor E3160_06745 PF11806 Domain of unknown function (DUF3327) E3160_06745 PF00756 Putative esterase E3160_06750 PF03621 MbtH-like protein E3160_06755 PF00975 Thioesterase domain E3160_06755 PF00501 AMP-binding enzyme E3160_06755 PF00550 Phosphopantetheine attachment site E3160_06755 PF00668 Condensation domain E3160_06760 PF02706 Chain length determinant protein E3160_06765 PF00005 ABC transporter E3160_06770 PF01032 FecCD transport family E3160_06775 PF01032 FecCD transport family E3160_06780 PF05977 Transmembrane secretion effector E3160_06785 PF01497 Periplasmic binding protein E3160_06790 PF00425 chorismate binding enzyme E3160_06795 PF13193 AMP-binding enzyme C-terminal domain E3160_06795 PF00501 AMP-binding enzyme E3160_06800 PF00857 Isochorismatase family E3160_06800 PF00550 Phosphopantetheine attachment site E3160_06810 PF03061 Thioesterase superfamily E3160_06815 PF13722 5TM C-terminal transporter carbon starvation CstA E3160_06815 PF02554 Carbon starvation protein CstA E3160_06820 PF04328 Selenoprotein, putative E3160_06825 PF00465 Iron-containing alcohol dehydrogenase E3160_06830 PF00155 Aminotransferase class I and II E3160_06835 PF02195 ParB-like nuclease domain E3160_06840 PF01507 Phosphoadenosine phosphosulfate reductase family E3160_06840 PF11922 Domain of unknown function (DUF3440) E3160_06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_06845 PF03466 LysR substrate binding domain E3160_06850 PF13098 Thioredoxin-like domain E3160_06855 PF00578 AhpC/TSA family E3160_06855 PF10417 C-terminal domain of 1-Cys peroxiredoxin E3160_06860 PF13192 Thioredoxin domain E3160_06860 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_06865 PF00582 Universal stress protein family E3160_06870 PF00107 Zinc-binding dehydrogenase E3160_06870 PF08240 Alcohol dehydrogenase GroES-like domain E3160_06870 PF13823 Alcohol dehydrogenase GroES-associated E3160_06875 PF01272 Transcription elongation factor, GreA/GreB, C-term E3160_06875 PF14760 Rnk N-terminus E3160_06880 PF00445 Ribonuclease T2 family E3160_06885 PF00939 Sodium:sulfate symporter transmembrane region E3160_06890 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E3160_06895 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E3160_06900 PF04223 Citrate lyase, alpha subunit (CitF) E3160_06905 PF03328 HpcH/HpaI aldolase/citrate lyase family E3160_06910 PF06857 Malonate decarboxylase delta subunit (MdcD) E3160_06915 PF08218 Citrate lyase ligase C-terminal domain E3160_06920 PF17203 Single cache domain 3 E3160_06920 PF00989 PAS fold E3160_06920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3160_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_06925 PF00072 Response regulator receiver domain E3160_06925 PF12431 Transcriptional regulator E3160_06930 PF03606 C4-dicarboxylate anaerobic carrier E3160_06935 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP E3160_06940 PF00313 'Cold-shock' DNA-binding domain E3160_06945 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E3160_06950 PF00795 Carbon-nitrogen hydrolase E3160_06955 PF02416 mttA/Hcf106 family E3160_06960 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E3160_06960 PF04055 Radical SAM superfamily E3160_06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_06965 PF03466 LysR substrate binding domain E3160_06970 PF03099 Biotin/lipoate A/B protein ligase family E3160_06975 PF04359 Protein of unknown function (DUF493) E3160_06980 PF07943 Penicillin-binding protein 5, C-terminal domain E3160_06980 PF00768 D-alanyl-D-alanine carboxypeptidase E3160_06985 PF03330 Lytic transglycolase E3160_06985 PF05036 Sporulation related domain E3160_06990 PF01098 Cell cycle protein E3160_06995 PF00905 Penicillin binding protein transpeptidase domain E3160_06995 PF03717 Penicillin-binding Protein dimerisation domain E3160_07000 PF02590 Predicted SPOUT methyltransferase E3160_07010 PF00300 Histidine phosphatase superfamily (branch 1) E3160_07015 PF01467 Cytidylyltransferase-like E3160_07020 PF14840 Processivity clamp loader gamma complex DNA pol III C-term E3160_07020 PF06144 DNA polymerase III, delta subunit E3160_07025 PF04390 Lipopolysaccharide-assembly E3160_07030 PF08264 Anticodon-binding domain of tRNA E3160_07030 PF13603 Leucyl-tRNA synthetase, Domain 2 E3160_07030 PF00133 tRNA synthetases class I (I, L, M and V) E3160_07035 PF07295 Zinc-ribbon containing domain E3160_07045 PF06889 Protein of unknown function (DUF1266) E3160_07055 PF08238 Sel1 repeat E3160_07060 PF06889 Protein of unknown function (DUF1266) E3160_07075 PF00012 Hsp70 protein E3160_07080 PF01156 Inosine-uridine preferring nucleoside hydrolase E3160_07085 PF00005 ABC transporter E3160_07090 PF00528 Binding-protein-dependent transport system inner membrane component E3160_07095 PF00528 Binding-protein-dependent transport system inner membrane component E3160_07100 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_07105 PF00795 Carbon-nitrogen hydrolase E3160_07110 PF00571 CBS domain E3160_07110 PF03471 Transporter associated domain E3160_07115 PF02130 Uncharacterized protein family UPF0054 E3160_07120 PF02562 PhoH-like protein E3160_07125 PF00919 Uncharacterized protein family UPF0004 E3160_07125 PF04055 Radical SAM superfamily E3160_07125 PF01938 TRAM domain E3160_07130 PF01494 FAD binding domain E3160_07170 PF00733 Asparagine synthase E3160_07170 PF13537 Glutamine amidotransferase domain E3160_07175 PF13344 Haloacid dehalogenase-like hydrolase E3160_07180 PF01047 MarR family E3160_07180 PF00480 ROK family E3160_07185 PF01979 Amidohydrolase family E3160_07190 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E3160_07195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E3160_07195 PF00367 phosphotransferase system, EIIB E3160_07195 PF02378 Phosphotransferase system, EIIC E3160_07200 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E3160_07200 PF00749 tRNA synthetases class I (E and Q), catalytic domain E3160_07210 PF03573 outer membrane porin, OprD family E3160_07215 PF13982 YbfN-like lipoprotein E3160_07220 PF01475 Ferric uptake regulator family E3160_07230 PF00258 Flavodoxin E3160_07235 PF01402 Ribbon-helix-helix protein, copG family E3160_07240 PF12697 Alpha/beta hydrolase family E3160_07245 PF03925 SeqA protein C-terminal domain E3160_07245 PF17206 SeqA protein N-terminal domain E3160_07250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3160_07250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3160_07250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3160_07250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3160_07255 PF13520 Amino acid permease E3160_07260 PF01276 Orn/Lys/Arg decarboxylase, major domain E3160_07260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3160_07260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3160_07275 PF00072 Response regulator receiver domain E3160_07275 PF00486 Transcriptional regulatory protein, C terminal E3160_07280 PF13493 Domain of unknown function (DUF4118) E3160_07280 PF13492 GAF domain E3160_07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_07280 PF00512 His Kinase A (phospho-acceptor) domain E3160_07280 PF02702 Osmosensitive K+ channel His kinase sensor domain E3160_07285 PF02669 K+-transporting ATPase, c chain E3160_07295 PF03814 Potassium-transporting ATPase A subunit E3160_07300 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) E3160_07305 PF10725 Protein of unknown function (DUF2517) E3160_07310 PF05593 RHS Repeat E3160_07310 PF03527 RHS protein E3160_07310 PF15606 Bacterial toxin 34 E3160_07320 PF15631 NTF2 fold immunity protein E3160_07335 PF13808 DDE_Tnp_1-associated E3160_07335 PF01609 Transposase DDE domain E3160_07340 PF08349 Protein of unknown function (DUF1722) E3160_07345 PF00875 DNA photolyase E3160_07345 PF03441 FAD binding domain of DNA photolyase E3160_07350 PF00854 POT family E3160_07355 PF01784 NIF3 (NGG1p interacting factor 3) E3160_07360 PF02682 Carboxyltransferase domain, subdomain C and D E3160_07365 PF02626 Carboxyltransferase domain, subdomain A and B E3160_07370 PF03746 LamB/YcsF family E3160_07375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E3160_07375 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E3160_07375 PF06827 Zinc finger found in FPG and IleRS E3160_07380 PF05145 Transition state regulatory protein AbrB E3160_07385 PF00419 Fimbrial protein E3160_07390 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_07390 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_07410 PF00419 Fimbrial protein E3160_07415 PF00285 Citrate synthase, C-terminal domain E3160_07425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E3160_07430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E3160_07435 PF00890 FAD binding domain E3160_07435 PF02910 Fumarate reductase flavoprotein C-term E3160_07440 PF13085 2Fe-2S iron-sulfur cluster binding domain E3160_07445 PF02779 Transketolase, pyrimidine binding domain E3160_07445 PF16870 2-oxoglutarate dehydrogenase C-terminal E3160_07445 PF00676 Dehydrogenase E1 component E3160_07445 PF16078 2-oxoglutarate dehydrogenase N-terminus E3160_07450 PF02817 e3 binding domain E3160_07450 PF00364 Biotin-requiring enzyme E3160_07450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3160_07455 PF08442 ATP-grasp domain E3160_07455 PF00549 CoA-ligase E3160_07460 PF02629 CoA binding domain E3160_07460 PF00549 CoA-ligase E3160_07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_07475 PF03466 LysR substrate binding domain E3160_07480 PF12557 Cob(I)alamin adenosyltransferase N terminal E3160_07480 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E3160_07485 PF05681 Fumarate hydratase (Fumerase) E3160_07485 PF05683 Fumarase C-terminus E3160_07490 PF00375 Sodium:dicarboxylate symporter family E3160_07505 PF05034 Methylaspartate ammonia-lyase N-terminus E3160_07505 PF07476 Methylaspartate ammonia-lyase C-terminus E3160_07510 PF06368 Methylaspartate mutase E chain (MutE) E3160_07515 PF13941 MutL protein E3160_07520 PF02310 B12 binding domain E3160_07535 PF01654 Cytochrome bd terminal oxidase subunit I E3160_07540 PF02322 Cytochrome bd terminal oxidase subunit II E3160_07545 PF08173 Membrane bound YbgT-like protein E3160_07550 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) E3160_07555 PF03061 Thioesterase superfamily E3160_07560 PF01618 MotA/TolQ/ExbB proton channel family E3160_07565 PF02472 Biopolymer transport protein ExbD/TolR E3160_07570 PF06519 TolA C-terminal E3160_07575 PF04052 TolB amino-terminal domain E3160_07575 PF07676 WD40-like Beta Propeller Repeat E3160_07580 PF00691 OmpA family E3160_07585 PF16331 TolA binding protein trimerisation E3160_07585 PF13174 Tetratricopeptide repeat E3160_07615 PF02445 Quinolinate synthetase A protein E3160_07620 PF04973 Nicotinamide mononucleotide transporter E3160_07625 PF01545 Cation efflux family E3160_07630 PF13985 YbgS-like protein E3160_07635 PF00793 DAHP synthetase I family E3160_07640 PF00300 Histidine phosphatase superfamily (branch 1) E3160_07645 PF01263 Aldose 1-epimerase E3160_07650 PF08544 GHMP kinases C terminal E3160_07650 PF00288 GHMP kinases N terminal domain E3160_07650 PF10509 Galactokinase galactose-binding signature E3160_07655 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E3160_07655 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E3160_07660 PF16363 GDP-mannose 4,6 dehydratase E3160_07665 PF00005 ABC transporter E3160_07670 PF03459 TOBE domain E3160_07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_07675 PF10766 Multidrug efflux pump-associated protein AcrZ E3160_07685 PF00528 Binding-protein-dependent transport system inner membrane component E3160_07690 PF03459 TOBE domain E3160_07690 PF00005 ABC transporter E3160_07700 PF10282 Lactonase, 7-bladed beta-propeller E3160_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_07705 PF03466 LysR substrate binding domain E3160_07710 PF04303 PrpF protein E3160_07715 PF00939 Sodium:sulfate symporter transmembrane region E3160_07720 PF00330 Aconitase family (aconitate hydratase) E3160_07720 PF00694 Aconitase C-terminal domain E3160_07725 PF01095 Pectinesterase E3160_07730 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain E3160_07730 PF00589 Phage integrase family E3160_07800 PF10800 Protein of unknown function (DUF2528) E3160_07810 PF06992 Replication protein P E3160_07820 PF05772 NinB protein E3160_07840 PF00149 Calcineurin-like phosphoesterase E3160_07880 PF04971 Bacteriophage P21 holin S E3160_07885 PF00959 Phage lysozyme E3160_07890 PF03245 Bacteriophage Rz lysis protein E3160_07935 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3160_07955 PF01161 Phosphatidylethanolamine-binding protein E3160_07960 PF00202 Aminotransferase class-III E3160_07965 PF06968 Biotin and Thiamin Synthesis associated domain E3160_07965 PF04055 Radical SAM superfamily E3160_07970 PF00155 Aminotransferase class I and II E3160_07975 PF08241 Methyltransferase domain E3160_07985 PF17757 UvrB interaction domain E3160_07985 PF00271 Helicase conserved C-terminal domain E3160_07985 PF02151 UvrB/uvrC motif E3160_07985 PF04851 Type III restriction enzyme, res subunit E3160_07985 PF12344 Ultra-violet resistance protein B E3160_07990 PF01933 Uncharacterised protein family UPF0052 E3160_07995 PF06463 Molybdenum Cofactor Synthesis C E3160_07995 PF04055 Radical SAM superfamily E3160_08000 PF00994 Probable molybdopterin binding domain E3160_08005 PF01967 MoaC family E3160_08010 PF02597 ThiS family E3160_08015 PF02391 MoaE protein E3160_08020 PF01027 Inhibitor of apoptosis-promoting Bax1 E3160_08030 PF01027 Inhibitor of apoptosis-promoting Bax1 E3160_08035 PF03706 Lysylphosphatidylglycerol synthase TM region E3160_08040 PF13091 PLD-like domain E3160_08045 PF03372 Endonuclease/Exonuclease/phosphatase family E3160_08050 PF11076 Putative inner membrane protein YbhQ E3160_08065 PF00005 ABC transporter E3160_08070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_08075 PF00440 Bacterial regulatory proteins, tetR family E3160_08075 PF09209 Tetracyclin repressor-like, C-terminal domain E3160_08080 PF00271 Helicase conserved C-terminal domain E3160_08080 PF00270 DEAD/DEAH box helicase E3160_08090 PF00270 DEAD/DEAH box helicase E3160_08090 PF06733 DEAD_2 E3160_08090 PF13307 Helicase C-terminal domain E3160_08095 PF02885 Glycosyl transferase family, helical bundle domain E3160_08100 PF02615 Malate/L-lactate dehydrogenase E3160_08105 PF07338 Protein of unknown function (DUF1471) E3160_08110 PF01258 Prokaryotic dksA/traR C4-type zinc finger E3160_08115 PF13640 2OG-Fe(II) oxygenase superfamily E3160_08115 PF18331 PKHD-type hydroxylase C-terminal domain E3160_08120 PF00593 TonB dependent receptor E3160_08120 PF07715 TonB-dependent Receptor Plug Domain E3160_08125 PF07338 Protein of unknown function (DUF1471) E3160_08130 PF05971 RNA methyltransferase E3160_08135 PF00924 Mechanosensitive ion channel E3160_08140 PF00005 ABC transporter E3160_08145 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08150 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_08155 PF00210 Ferritin-like domain E3160_08160 PF00892 EamA-like transporter family E3160_08170 PF13505 Outer membrane protein beta-barrel domain E3160_08175 PF00884 Sulfatase E3160_08185 PF02742 Iron dependent repressor, metal binding and dimerisation domain E3160_08185 PF01325 Iron dependent repressor, N-terminal DNA binding domain E3160_08190 PF03600 Citrate transporter E3160_08195 PF17969 L,D-transpeptidase C-terminal domain E3160_08195 PF03734 L,D-transpeptidase catalytic domain E3160_08200 PF12848 ABC transporter E3160_08200 PF00005 ABC transporter E3160_08205 PF07350 Protein of unknown function (DUF1479) E3160_08215 PF02901 Pyruvate formate lyase-like E3160_08215 PF01228 Glycine radical E3160_08220 PF04055 Radical SAM superfamily E3160_08225 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3160_08230 PF00899 ThiF family E3160_08235 PF03453 MoeA N-terminal region (domain I and II) E3160_08235 PF03454 MoeA C-terminal region (domain IV) E3160_08235 PF00994 Probable molybdopterin binding domain E3160_08240 PF01112 Asparaginase E3160_08245 PF01112 Asparaginase E3160_08250 PF00005 ABC transporter E3160_08250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_08255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_08260 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08265 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08265 PF12911 N-terminal TM domain of oligopeptide transport permease C E3160_08270 PF00563 EAL domain E3160_08270 PF17153 Periplasmic sensor domain, extracellular E3160_08275 PF17156 Gammaproteobacterial periplasmic sensor domain E3160_08275 PF00990 Diguanylate cyclase, GGDEF domain E3160_08290 PF00919 Uncharacterized protein family UPF0004 E3160_08290 PF18693 TRAM domain E3160_08290 PF04055 Radical SAM superfamily E3160_08295 PF10799 Biofilm formation protein (YliH/bssR) E3160_08300 PF07995 Glucose / Sorbosone dehydrogenase E3160_08305 PF13417 Glutathione S-transferase, N-terminal domain E3160_08305 PF00043 Glutathione S-transferase, C-terminal domain E3160_08310 PF00768 D-alanyl-D-alanine carboxypeptidase E3160_08310 PF07943 Penicillin-binding protein 5, C-terminal domain E3160_08315 PF08220 DeoR-like helix-turn-helix domain E3160_08315 PF00455 DeoR C terminal sensor domain E3160_08320 PF01569 PAP2 superfamily E3160_08325 PF07690 Major Facilitator Superfamily E3160_08340 PF07690 Major Facilitator Superfamily E3160_08345 PF00440 Bacterial regulatory proteins, tetR family E3160_08350 PF02080 TrkA-C domain E3160_08350 PF06826 Predicted Permease Membrane Region E3160_08355 PF11045 Putative inner membrane protein of Enterobacteriaceae E3160_08360 PF00462 Glutaredoxin E3160_08365 PF07214 Protein of unknown function (DUF1418) E3160_08370 PF00881 Nitroreductase family E3160_08375 PF08443 RimK-like ATP-grasp domain E3160_08375 PF18030 RimK PreATP-grasp domain E3160_08380 PF10722 Putative bacterial sensory transduction regulator E3160_08385 PF13416 Bacterial extracellular solute-binding protein E3160_08390 PF08402 TOBE domain E3160_08390 PF00005 ABC transporter E3160_08395 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08400 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08405 PF10767 Protein of unknown function (DUF2593) E3160_08410 PF05958 tRNA (Uracil-5-)-methyltransferase E3160_08415 PF03611 PTS system sugar-specific permease component E3160_08430 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_08435 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08440 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08445 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_08450 PF00005 ABC transporter E3160_08455 PF12883 Protein of unknown function (DUF3828) E3160_08475 PF01906 Putative heavy-metal-binding E3160_08480 PF01510 N-acetylmuramoyl-L-alanine amidase E3160_08485 PF01370 NAD dependent epimerase/dehydratase family E3160_08490 PF13460 NAD(P)H-binding E3160_08490 PF11066 Protein of unknown function (DUF2867) E3160_08495 PF01212 Beta-eliminating lyase E3160_08500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3160_08500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_08500 PF00205 Thiamine pyrophosphate enzyme, central domain E3160_08505 PF00175 Oxidoreductase NAD-binding domain E3160_08505 PF00970 Oxidoreductase FAD-binding domain E3160_08505 PF00111 2Fe-2S iron-sulfur cluster binding domain E3160_08510 PF03063 Prismane/CO dehydrogenase family E3160_08515 PF03956 Lysine exporter LysO E3160_08525 PF00230 Major intrinsic protein E3160_08530 PF11398 Protein of unknown function (DUF2813) E3160_08535 PF04393 Protein of unknown function (DUF535) E3160_08540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_08545 PF00005 ABC transporter E3160_08545 PF02687 FtsX-like permease family E3160_08545 PF12704 MacB-like periplasmic core domain E3160_08550 PF00313 'Cold-shock' DNA-binding domain E3160_08555 PF02617 ATP-dependent Clp protease adaptor protein ClpS E3160_08560 PF00004 ATPase family associated with various cellular activities (AAA) E3160_08560 PF07724 AAA domain (Cdc48 subfamily) E3160_08560 PF17871 AAA lid domain E3160_08560 PF02861 Clp amino terminal domain, pathogenicity island component E3160_08560 PF10431 C-terminal, D2-small domain, of ClpB protein E3160_08570 PF01176 Translation initiation factor 1A / IF-1 E3160_08575 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E3160_08580 PF00005 ABC transporter E3160_08580 PF00664 ABC transporter transmembrane region E3160_08585 PF00664 ABC transporter transmembrane region E3160_08585 PF00005 ABC transporter E3160_08590 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_08595 PF01037 Lrp/AsnC ligand binding domain E3160_08600 PF09397 Ftsk gamma domain E3160_08600 PF01580 FtsK/SpoIIIE family E3160_08600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E3160_08600 PF17854 FtsK alpha domain E3160_08605 PF03548 Outer membrane lipoprotein carrier protein LolA E3160_08610 PF12002 MgsA AAA+ ATPase C terminal E3160_08610 PF16193 AAA C-terminal domain E3160_08610 PF00004 ATPase family associated with various cellular activities (AAA) E3160_08615 PF02403 Seryl-tRNA synthetase N-terminal domain E3160_08615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3160_08620 PF00384 Molybdopterin oxidoreductase E3160_08620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_08620 PF01568 Molydopterin dinucleotide binding domain E3160_08625 PF12800 4Fe-4S binding domain E3160_08625 PF13247 4Fe-4S dicluster domain E3160_08630 PF04976 DMSO reductase anchor subunit (DmsC) E3160_08640 PF07690 Major Facilitator Superfamily E3160_08645 PF13520 Amino acid permease E3160_08655 PF04055 Radical SAM superfamily E3160_08660 PF01228 Glycine radical E3160_08660 PF02901 Pyruvate formate lyase-like E3160_08665 PF01226 Formate/nitrite transporter E3160_08670 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding E3160_08670 PF18381 YcaO cyclodehydratase C-terminal domain E3160_08675 PF04239 Protein of unknown function (DUF421) E3160_08680 PF00266 Aminotransferase class-V E3160_08685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E3160_08690 PF01435 Peptidase family M48 E3160_08695 PF02224 Cytidylate kinase E3160_08700 PF00575 S1 RNA binding domain E3160_08705 PF00216 Bacterial DNA-binding protein E3160_08710 PF00753 Metallo-beta-lactamase superfamily E3160_08710 PF03772 Competence protein E3160_08715 PF00005 ABC transporter E3160_08715 PF00664 ABC transporter transmembrane region E3160_08720 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E3160_08725 PF06224 Winged helix DNA-binding domain E3160_08730 PF03966 Trm112p-like protein E3160_08735 PF02348 Cytidylyltransferase E3160_08740 PF01636 Phosphotransferase enzyme family E3160_08745 PF02698 DUF218 domain E3160_08755 PF17192 MukF middle domain E3160_08755 PF17193 MukF C-terminal domain E3160_08755 PF03882 MukF winged-helix domain E3160_08760 PF04288 MukE-like family E3160_08765 PF04310 MukB N-terminal E3160_08765 PF16330 MukB hinge domain E3160_08770 PF03734 L,D-transpeptidase catalytic domain E3160_08770 PF01471 Putative peptidoglycan binding domain E3160_08775 PF05951 Bacterial protein of unknown function (DUF882) E3160_08780 PF00753 Metallo-beta-lactamase superfamily E3160_08785 PF00155 Aminotransferase class I and II E3160_08790 PF00267 Gram-negative porin E3160_08795 PF01336 OB-fold nucleic acid binding domain E3160_08795 PF00152 tRNA synthetases class II (D, K and N) E3160_08800 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E3160_08800 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E3160_08805 PF01433 Peptidase family M1 domain E3160_08805 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E3160_08805 PF11940 Domain of unknown function (DUF3458) Ig-like fold E3160_08810 PF00005 ABC transporter E3160_08815 PF00528 Binding-protein-dependent transport system inner membrane component E3160_08820 PF00296 Luciferase-like monooxygenase E3160_08825 PF09084 NMT1/THI5 like E3160_08830 PF03358 NADPH-dependent FMN reductase E3160_08835 PF00419 Fimbrial protein E3160_08840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_08840 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_08850 PF00419 Fimbrial protein E3160_08855 PF00419 Fimbrial protein E3160_08860 PF00419 Fimbrial protein E3160_08870 PF01180 Dihydroorotate dehydrogenase E3160_08875 PF07126 Cell-division protein ZapC E3160_08880 PF00111 2Fe-2S iron-sulfur cluster binding domain E3160_08880 PF03473 MOSC domain E3160_08880 PF03476 MOSC N-terminal beta barrel domain E3160_08885 PF02926 THUMP domain E3160_08885 PF10672 S-adenosylmethionine-dependent methyltransferase E3160_08885 PF01170 Putative RNA methylase family UPF0020 E3160_08890 PF12848 ABC transporter E3160_08890 PF00005 ABC transporter E3160_08890 PF16326 ABC transporter C-terminal domain E3160_08895 PF04403 Paraquat-inducible protein A E3160_08900 PF02470 MlaD protein E3160_08905 PF03886 ABC-type transport auxiliary lipoprotein component E3160_08910 PF04957 Ribosome modulation factor E3160_08915 PF07977 FabA-like domain E3160_08920 PF13654 AAA domain E3160_08920 PF05362 Lon protease (S16) C-terminal proteolytic domain E3160_08925 PF06303 MatP N-terminal domain E3160_08925 PF17414 MatP C-terminal ribbon-helix-helix domain E3160_08930 PF01389 OmpA-like transmembrane domain E3160_08930 PF00691 OmpA family E3160_08935 PF03846 Cell division inhibitor SulA E3160_08940 PF04994 TfoX C-terminal domain E3160_08940 PF04993 TfoX N-terminal domain E3160_08945 PF12805 FUSC-like inner membrane protein yccS E3160_08950 PF03733 Inner membrane component domain E3160_08955 PF12462 DNA helicase IV / RNA helicase N terminal E3160_08955 PF00580 UvrD/REP helicase N-terminal domain E3160_08955 PF13361 UvrD-like helicase C-terminal domain E3160_08960 PF02142 MGS-like domain E3160_08965 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) E3160_08970 PF13380 CoA binding domain E3160_08975 PF08755 Hemimethylated DNA-binding protein YccV like E3160_08980 PF17785 PUA-like domain E3160_08980 PF10672 S-adenosylmethionine-dependent methyltransferase E3160_08985 PF00708 Acylphosphatase E3160_08990 PF04358 DsrC like protein E3160_08995 PF01027 Inhibitor of apoptosis-promoting Bax1 E3160_09020 PF07358 Protein of unknown function (DUF1482) E3160_09045 PF07151 Protein of unknown function (DUF1391) E3160_09060 PF01381 Helix-turn-helix E3160_09060 PF00717 Peptidase S24-like E3160_09085 PF01695 IstB-like ATP binding protein E3160_09090 PF07789 Protein of unknown function (DUF1627) E3160_09115 PF01848 Hok/gef family E3160_09125 PF06147 Protein of unknown function (DUF968) E3160_09130 PF05866 Endodeoxyribonuclease RusA E3160_09135 PF06530 Phage antitermination protein Q E3160_09150 PF12833 Helix-turn-helix domain E3160_09170 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase E3160_09175 PF04971 Bacteriophage P21 holin S E3160_09195 PF00959 Phage lysozyme E3160_09205 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3160_09210 PF02831 gpW E3160_09220 PF01343 Peptidase family S49 E3160_09230 PF03864 Phage major capsid protein E E3160_09285 PF06316 Enterobacterial Ail/Lom protein E3160_09290 PF07484 Phage Tail Collar Domain E3160_09290 PF03335 Phage tail fibre repeat E3160_09290 PF08400 Prophage tail fibre N-terminal E3160_09300 PF04806 EspF protein repeat E3160_09315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3160_09315 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E3160_09320 PF00374 Nickel-dependent hydrogenase E3160_09325 PF01292 Prokaryotic cytochrome b561 E3160_09330 PF01750 Hydrogenase maturation protease E3160_09335 PF07449 Hydrogenase-1 expression protein HyaE E3160_09340 PF04809 HupH hydrogenase expression protein, C-terminal conserved region E3160_09345 PF01654 Cytochrome bd terminal oxidase subunit I E3160_09350 PF02322 Cytochrome bd terminal oxidase subunit II E3160_09355 PF08173 Membrane bound YbgT-like protein E3160_09360 PF00328 Histidine phosphatase superfamily (branch 2) E3160_09365 PF02706 Chain length determinant protein E3160_09365 PF13614 AAA domain E3160_09365 PF13807 G-rich domain on putative tyrosine kinase E3160_09370 PF01451 Low molecular weight phosphotyrosine protein phosphatase E3160_09375 PF10531 SLBB domain E3160_09375 PF02563 Polysaccharide biosynthesis/export protein E3160_09375 PF18412 Outer-membrane lipoprotein Wza C-terminal domain E3160_09380 PF06082 Exopolysaccharide biosynthesis protein YbjH E3160_09385 PF06251 Capsule biosynthesis GfcC E3160_09390 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF E3160_09400 PF00313 'Cold-shock' DNA-binding domain E3160_09405 PF00313 'Cold-shock' DNA-binding domain E3160_09415 PF15939 Putative antitoxin of bacterial toxin-antitoxin system E3160_09420 PF15939 Putative antitoxin of bacterial toxin-antitoxin system E3160_09425 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system E3160_09430 PF12801 4Fe-4S binding domain E3160_09435 PF00072 Response regulator receiver domain E3160_09435 PF01627 Hpt domain E3160_09435 PF00512 His Kinase A (phospho-acceptor) domain E3160_09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_09435 PF00672 HAMP domain E3160_09440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3160_09445 PF00072 Response regulator receiver domain E3160_09445 PF00486 Transcriptional regulatory protein, C terminal E3160_09450 PF03264 NapC/NirT cytochrome c family, N-terminal region E3160_09455 PF01568 Molydopterin dinucleotide binding domain E3160_09455 PF18364 Molybdopterin oxidoreductase N-terminal domain E3160_09455 PF00384 Molybdopterin oxidoreductase E3160_09460 PF02613 Nitrate reductase delta subunit E3160_09470 PF00226 DnaJ domain E3160_09470 PF01556 DnaJ C terminal domain E3160_09480 PF00328 Histidine phosphatase superfamily (branch 2) E3160_09485 PF13993 YccJ-like protein E3160_09490 PF03358 NADPH-dependent FMN reductase E3160_09495 PF10685 Stress-induced bacterial acidophilic repeat motif E3160_09500 PF00860 Permease family E3160_09505 PF01613 Flavin reductase like domain E3160_09510 PF00881 Nitroreductase family E3160_09520 PF01042 Endoribonuclease L-PSP E3160_09525 PF00857 Isochorismatase family E3160_09530 PF00296 Luciferase-like monooxygenase E3160_09540 PF00440 Bacterial regulatory proteins, tetR family E3160_09540 PF08362 YcdC-like protein, C-terminal region E3160_09545 PF00171 Aldehyde dehydrogenase family E3160_09545 PF01619 Proline dehydrogenase E3160_09545 PF14850 DNA-binding domain of Proline dehydrogenase E3160_09545 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E3160_09555 PF00474 Sodium:solute symporter family E3160_09565 PF03239 Iron permease FTR1 family E3160_09570 PF13473 Cupredoxin-like domain E3160_09570 PF09375 Imelysin E3160_09575 PF04261 Dyp-type peroxidase family E3160_09580 PF02562 PhoH-like protein E3160_09585 PF13994 PgaD-like protein E3160_09590 PF00535 Glycosyl transferase family 2 E3160_09595 PF01522 Polysaccharide deacetylase E3160_09595 PF14883 Hypothetical glycosyl hydrolase family 13 E3160_09605 PF00990 Diguanylate cyclase, GGDEF domain E3160_09605 PF17158 Membrane-associated sensor, integral membrane domain E3160_09610 PF12792 CSS motif domain associated with EAL E3160_09610 PF00563 EAL domain E3160_09620 PF00486 Transcriptional regulatory protein, C terminal E3160_09630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_09630 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_09645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_09645 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_09650 PF16970 Type-1 fimbrial protein, A E3160_09660 PF13018 Extended Signal Peptide of Type V secretion system E3160_09660 PF04829 Pre-toxin domain with VENN motif E3160_09660 PF05860 haemagglutination activity domain E3160_09660 PF13332 Hemagglutinin repeat E3160_09665 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB E3160_09665 PF17287 POTRA domain E3160_09665 PF08479 POTRA domain, ShlB-type E3160_09670 PF01648 4'-phosphopantetheinyl transferase superfamily E3160_09675 PF00106 short chain dehydrogenase E3160_09680 PF07977 FabA-like domain E3160_09690 PF01571 Aminomethyltransferase folate-binding domain E3160_09690 PF08669 Glycine cleavage T-protein C-terminal barrel domain E3160_09695 PF00109 Beta-ketoacyl synthase, N-terminal domain E3160_09695 PF02801 Beta-ketoacyl synthase, C-terminal domain E3160_09710 PF00005 ABC transporter E3160_09745 PF13356 Arm DNA-binding domain E3160_09745 PF00589 Phage integrase family E3160_09775 PF13148 Protein of unknown function (DUF3987) E3160_09820 PF05717 IS66 Orf2 like protein E3160_09855 PF01219 Prokaryotic diacylglycerol kinase E3160_09860 PF00884 Sulfatase E3160_09860 PF08019 Phosphoethanolamine transferase EptA/EptB E3160_09870 PF01774 UreD urease accessory protein E3160_09875 PF00547 Urease, gamma subunit E3160_09880 PF00699 Urease beta subunit E3160_09885 PF01979 Amidohydrolase family E3160_09885 PF00449 Urease alpha-subunit, N-terminal domain E3160_09890 PF05194 UreE urease accessory protein, C-terminal domain E3160_09890 PF02814 UreE urease accessory protein, N-terminal domain E3160_09895 PF01730 UreF E3160_09900 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3160_09915 PF01197 Ribosomal protein L31 E3160_09965 PF05717 IS66 Orf2 like protein E3160_09970 PF13005 zinc-finger binding domain of transposase IS66 E3160_09970 PF13007 Transposase C of IS166 homeodomain E3160_09970 PF13817 IS66 C-terminal element E3160_09970 PF03050 Transposase IS66 family E3160_10005 PF11202 Phosphoribosyl transferase (PRTase) E3160_10005 PF15608 PELOTA RNA binding domain E3160_10025 PF02342 TerD domain E3160_10030 PF02342 TerD domain E3160_10035 PF05099 Tellurite resistance protein TerB E3160_10040 PF03741 Integral membrane protein TerC family E3160_10045 PF02342 TerD domain E3160_10050 PF02342 TerD domain E3160_10055 PF01548 Transposase E3160_10055 PF02371 Transposase IS116/IS110/IS902 family E3160_10060 PF02342 TerD domain E3160_10070 PF00593 TonB dependent receptor E3160_10070 PF07715 TonB-dependent Receptor Plug Domain E3160_10125 PF06722 Protein of unknown function (DUF1205) E3160_10170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB E3160_10170 PF17287 POTRA domain E3160_10170 PF08479 POTRA domain, ShlB-type E3160_10190 PF13018 Extended Signal Peptide of Type V secretion system E3160_10190 PF03797 Autotransporter beta-domain E3160_10190 PF16168 Adhesin of bacterial autotransporter system, probable stalk E3160_10195 PF00350 Dynamin family E3160_10200 PF13990 YjcZ-like protein E3160_10215 PF06067 Domain of unknown function (DUF932) E3160_10220 PF03230 Antirestriction protein E3160_10225 PF04002 RadC-like JAB domain E3160_10230 PF06174 Protein of unknown function (DUF987) E3160_10235 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E3160_10240 PF06755 CbtA_toxin of type IV toxin-antitoxin system E3160_10265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3160_10270 PF02811 PHP domain E3160_10275 PF02613 Nitrate reductase delta subunit E3160_10280 PF06496 Protein of unknown function (DUF1097) E3160_10290 PF13007 Transposase C of IS166 homeodomain E3160_10290 PF03050 Transposase IS66 family E3160_10290 PF13817 IS66 C-terminal element E3160_10290 PF13005 zinc-finger binding domain of transposase IS66 E3160_10295 PF05717 IS66 Orf2 like protein E3160_10310 PF10614 Type VIII secretion system (T8SS), CsgF protein E3160_10315 PF10627 Curli assembly protein CsgE E3160_10320 PF00196 Bacterial regulatory proteins, luxR family E3160_10325 PF07012 Curlin associated repeat E3160_10330 PF07012 Curlin associated repeat E3160_10335 PF10610 Thin aggregative fimbriae synthesis protein E3160_10345 PF01661 Macro domain E3160_10350 PF13091 PLD-like domain E3160_10355 PF01757 Acyltransferase family E3160_10360 PF04349 Periplasmic glucan biosynthesis protein, MdoG E3160_10365 PF00535 Glycosyl transferase family 2 E3160_10370 PF07119 Protein of unknown function (DUF1375) E3160_10375 PF13984 MsyB protein E3160_10380 PF07690 Major Facilitator Superfamily E3160_10385 PF03279 Bacterial lipid A biosynthesis acyltransferase E3160_10395 PF04264 YceI-like domain E3160_10400 PF01292 Prokaryotic cytochrome b561 E3160_10405 PF10968 Protein of unknown function (DUF2770) E3160_10410 PF01266 FAD dependent oxidoreductase E3160_10415 PF13991 BssS protein family E3160_10420 PF06183 DinI-like family E3160_10425 PF01979 Amidohydrolase family E3160_10430 PF07273 Protein of unknown function (DUF1439) E3160_10435 PF04399 Glutaredoxin 2, C terminal domain E3160_10435 PF13417 Glutathione S-transferase, N-terminal domain E3160_10440 PF07690 Major Facilitator Superfamily E3160_10445 PF13302 Acetyltransferase (GNAT) domain E3160_10450 PF04337 Protein of unknown function, DUF480 E3160_10455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3160_10460 PF03023 Lipid II flippase MurJ E3160_10465 PF05130 FlgN protein E3160_10470 PF04316 Anti-sigma-28 factor, FlgM E3160_10475 PF13144 Chaperone for flagella basal body P-ring formation E3160_10480 PF00460 Flagella basal body rod protein E3160_10485 PF00460 Flagella basal body rod protein E3160_10485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3160_10490 PF03963 Flagellar hook capping protein - N-terminal region E3160_10490 PF13860 FlgD Ig-like domain E3160_10490 PF13861 FlgD Tudor-like domain E3160_10495 PF07559 Flagellar basal body protein FlaE E3160_10495 PF00460 Flagella basal body rod protein E3160_10495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3160_10500 PF00460 Flagella basal body rod protein E3160_10500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3160_10505 PF00460 Flagella basal body rod protein E3160_10505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3160_10510 PF02107 Flagellar L-ring protein E3160_10515 PF02119 Flagellar P-ring protein E3160_10520 PF10135 Rod binding protein E3160_10520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E3160_10525 PF00460 Flagella basal body rod protein E3160_10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3160_10530 PF00669 Bacterial flagellin N-terminal helical region E3160_10535 PF10150 Ribonuclease E/G family E3160_10535 PF00575 S1 RNA binding domain E3160_10535 PF12111 Polyribonucleotide phosphorylase C terminal E3160_10545 PF01479 S4 domain E3160_10545 PF00849 RNA pseudouridylate synthase E3160_10550 PF02545 Maf-like protein E3160_10555 PF02620 Large ribosomal RNA subunit accumulation protein YceD E3160_10560 PF01783 Ribosomal L32p protein family E3160_10565 PF02504 Fatty acid synthesis protein E3160_10570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E3160_10570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E3160_10575 PF00698 Acyl transferase domain E3160_10585 PF00550 Phosphopantetheine attachment site E3160_10590 PF00109 Beta-ketoacyl synthase, N-terminal domain E3160_10590 PF02801 Beta-ketoacyl synthase, C-terminal domain E3160_10595 PF01063 Amino-transferase class IV E3160_10600 PF02618 YceG-like family E3160_10605 PF02223 Thymidylate kinase E3160_10610 PF09115 DNA polymerase III, delta subunit, C terminal E3160_10615 PF01026 TatD related DNase E3160_10620 PF02378 Phosphotransferase system, EIIC E3160_10620 PF00367 phosphotransferase system, EIIB E3160_10625 PF07715 TonB-dependent Receptor Plug Domain E3160_10625 PF00593 TonB dependent receptor E3160_10635 PF01230 HIT domain E3160_10640 PF07233 Protein of unknown function (DUF1425) E3160_10645 PF13036 Peptidoglycan-synthase activator LpoB E3160_10650 PF01636 Phosphotransferase enzyme family E3160_10655 PF00933 Glycosyl hydrolase family 3 N terminal domain E3160_10660 PF05728 Uncharacterised protein family (UPF0227) E3160_10665 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_10670 PF05433 Glycine zipper 2TM domain E3160_10675 PF00440 Bacterial regulatory proteins, tetR family E3160_10680 PF07338 Protein of unknown function (DUF1471) E3160_10685 PF03734 L,D-transpeptidase catalytic domain E3160_10685 PF17969 L,D-transpeptidase C-terminal domain E3160_10685 PF01476 LysM domain E3160_10690 PF00270 DEAD/DEAH box helicase E3160_10690 PF00271 Helicase conserved C-terminal domain E3160_10690 PF17757 UvrB interaction domain E3160_10690 PF03461 TRCF domain E3160_10690 PF02559 CarD-like/TRCF domain E3160_10700 PF02687 FtsX-like permease family E3160_10700 PF12704 MacB-like periplasmic core domain E3160_10705 PF00005 ABC transporter E3160_10710 PF12704 MacB-like periplasmic core domain E3160_10710 PF02687 FtsX-like permease family E3160_10715 PF00480 ROK family E3160_10720 PF02146 Sir2 family E3160_10725 PF13416 Bacterial extracellular solute-binding protein E3160_10730 PF00528 Binding-protein-dependent transport system inner membrane component E3160_10735 PF00589 Phage integrase family E3160_10735 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain E3160_10760 PF06316 Enterobacterial Ail/Lom protein E3160_10765 PF07484 Phage Tail Collar Domain E3160_10765 PF08400 Prophage tail fibre N-terminal E3160_10765 PF03335 Phage tail fibre repeat E3160_10830 PF00528 Binding-protein-dependent transport system inner membrane component E3160_10835 PF08402 TOBE domain E3160_10835 PF00005 ABC transporter E3160_10840 PF01546 Peptidase family M20/M25/M40 E3160_10840 PF07687 Peptidase dimerisation domain E3160_10845 PF08007 Cupin superfamily protein E3160_10890 PF06069 PerC transcriptional activator E3160_10945 PF03354 Phage Terminase E3160_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_10960 PF08918 PhoQ Sensor E3160_10965 PF00072 Response regulator receiver domain E3160_10965 PF00486 Transcriptional regulatory protein, C terminal E3160_10970 PF08328 Adenylosuccinate lyase C-terminal E3160_10970 PF00206 Lyase E3160_10975 PF04356 Protein of unknown function (DUF489) E3160_10985 PF00293 NUDIX domain E3160_10990 PF00849 RNA pseudouridylate synthase E3160_10995 PF00180 Isocitrate/isopropylmalate dehydrogenase E3160_11000 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain E3160_11000 PF00589 Phage integrase family E3160_11035 PF06085 Lipoprotein Rz1 precursor E3160_11040 PF06291 Bor protein E3160_11045 PF07166 Protein of unknown function (DUF1398) E3160_11055 PF13132 Domain of unknown function (DUF3950) E3160_11060 PF07471 Phage DNA packaging protein Nu1 E3160_11065 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3160_11070 PF02831 gpW E3160_11080 PF01972 Serine dehydrogenase proteinase E3160_11080 PF01957 NfeD-like C-terminal, partner-binding E3160_11090 PF03864 Phage major capsid protein E E3160_11130 PF06791 Prophage tail length tape measure protein E3160_11160 PF06316 Enterobacterial Ail/Lom protein E3160_11170 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3160_11175 PF05067 Manganese containing catalase E3160_11180 PF05974 Domain of unknown function (DUF892) E3160_11185 PF05974 Domain of unknown function (DUF892) E3160_11190 PF10685 Stress-induced bacterial acidophilic repeat motif E3160_11200 PF08242 Methyltransferase domain E3160_11215 PF05717 IS66 Orf2 like protein E3160_11220 PF13005 zinc-finger binding domain of transposase IS66 E3160_11220 PF13007 Transposase C of IS166 homeodomain E3160_11220 PF13817 IS66 C-terminal element E3160_11220 PF03050 Transposase IS66 family E3160_11230 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3160_11235 PF00561 alpha/beta hydrolase fold E3160_11240 PF01278 Omptin family E3160_11250 PF13673 Acetyltransferase (GNAT) domain E3160_11255 PF00180 Isocitrate/isopropylmalate dehydrogenase E3160_11270 PF07166 Protein of unknown function (DUF1398) E3160_11275 PF13411 MerR HTH family regulatory protein E3160_11280 PF00563 EAL domain E3160_11280 PF04940 Sensors of blue-light using FAD E3160_11285 PF10798 Biofilm development protein YmgB/AriR E3160_11295 PF10798 Biofilm development protein YmgB/AriR E3160_11305 PF00563 EAL domain E3160_11305 PF12792 CSS motif domain associated with EAL E3160_11320 PF16456 YmgD protein E3160_11325 PF13436 Glycine-zipper domain E3160_11355 PF03776 Septum formation topological specificity factor MinE E3160_11360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E3160_11365 PF03775 Septum formation inhibitor MinC, C-terminal domain E3160_11365 PF05209 Septum formation inhibitor MinC, N-terminal domain E3160_11370 PF05666 Fels-1 Prophage Protein-like E3160_11375 PF04151 Bacterial pre-peptidase C-terminal domain E3160_11380 PF05166 YcgL domain E3160_11385 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3160_11390 PF03692 Putative zinc- or iron-chelating domain E3160_11395 PF06109 Haemolysin E (HlyE) E3160_11400 PF00717 Peptidase S24-like E3160_11405 PF11799 impB/mucB/samB family C-terminal domain E3160_11405 PF13438 Domain of unknown function (DUF4113) E3160_11405 PF00817 impB/mucB/samB family E3160_11405 PF11798 IMS family HHH motif E3160_11410 PF02600 Disulfide bond formation protein DsbB E3160_11415 PF06450 Bacterial Na+/H+ antiporter B (NhaB) E3160_11420 PF00392 Bacterial regulatory proteins, gntR family E3160_11420 PF07840 FadR C-terminal domain E3160_11425 PF04293 SpoVR like protein E3160_11430 PF01266 FAD dependent oxidoreductase E3160_11435 PF01168 Alanine racemase, N-terminal domain E3160_11435 PF00842 Alanine racemase, C-terminal domain E3160_11455 PF00999 Sodium/hydrogen exchanger family E3160_11455 PF03471 Transporter associated domain E3160_11455 PF02080 TrkA-C domain E3160_11460 PF17676 LD-carboxypeptidase C-terminal domain E3160_11460 PF02016 LD-carboxypeptidase N-terminal domain E3160_11465 PF01464 Transglycosylase SLT domain E3160_11470 PF07317 Flagellar regulator YcgR E3160_11470 PF07238 PilZ domain E3160_11475 PF04226 Transglycosylase associated protein E3160_11485 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E3160_11485 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E3160_11490 PF13649 Methyltransferase domain E3160_11495 PF00005 ABC transporter E3160_11515 PF01204 Trehalase E3160_11525 PF00381 PTS HPr component phosphorylation site E3160_11525 PF00391 PEP-utilising enzyme, mobile domain E3160_11525 PF05524 PEP-utilising enzyme, N-terminal E3160_11525 PF03610 PTS system fructose IIA component E3160_11530 PF02734 DAK2 domain E3160_11535 PF02733 Dak1 domain E3160_11540 PF00158 Sigma-54 interaction domain E3160_11540 PF00989 PAS fold E3160_11540 PF02954 Bacterial regulatory protein, Fis family E3160_11560 PF06071 Protein of unknown function (DUF933) E3160_11560 PF01926 50S ribosome-binding GTPase E3160_11565 PF01195 Peptidyl-tRNA hydrolase E3160_11570 PF10762 Protein of unknown function (DUF2583) E3160_11575 PF01740 STAS domain E3160_11575 PF00916 Sulfate permease family E3160_11580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E3160_11580 PF14572 Phosphoribosyl synthetase-associated domain E3160_11585 PF00288 GHMP kinases N terminal domain E3160_11585 PF08544 GHMP kinases C terminal E3160_11590 PF03550 Outer membrane lipoprotein LolB E3160_11595 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E3160_11595 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E3160_11595 PF01488 Shikimate / quinate 5-dehydrogenase E3160_11600 PF03462 PCRF domain E3160_11600 PF00472 RF-1 domain E3160_11605 PF17827 PrmC N-terminal domain E3160_11605 PF13847 Methyltransferase domain E3160_11610 PF04247 Invasion gene expression up-regulator, SirB E3160_11615 PF13369 Transglutaminase-like superfamily E3160_11620 PF00793 DAHP synthetase I family E3160_11625 PF13940 Toxin Ldr, type I toxin-antitoxin system E3160_11630 PF13940 Toxin Ldr, type I toxin-antitoxin system E3160_11635 PF01699 Sodium/calcium exchanger protein E3160_11640 PF06150 ChaB E3160_11645 PF04752 ChaC-like protein E3160_11650 PF02635 DsrE/DsrF-like family E3160_11655 PF11924 Inverse autotransporter, beta-domain E3160_11660 PF00196 Bacterial regulatory proteins, luxR family E3160_11660 PF00072 Response regulator receiver domain E3160_11665 PF07730 Histidine kinase E3160_11665 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E3160_11665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_11665 PF00672 HAMP domain E3160_11670 PF07690 Major Facilitator Superfamily E3160_11675 PF01568 Molydopterin dinucleotide binding domain E3160_11675 PF14710 Respiratory nitrate reductase alpha N-terminal E3160_11675 PF00384 Molybdopterin oxidoreductase E3160_11680 PF13247 4Fe-4S dicluster domain E3160_11680 PF14711 Respiratory nitrate reductase beta C-terminal E3160_11685 PF02613 Nitrate reductase delta subunit E3160_11690 PF02665 Nitrate reductase gamma subunit E3160_11720 PF01842 ACT domain E3160_11720 PF00551 Formyl transferase E3160_11725 PF02810 SEC-C motif E3160_11730 PF01734 Patatin-like phospholipase E3160_11735 PF00072 Response regulator receiver domain E3160_11740 PF00483 Nucleotidyl transferase E3160_11745 PF00816 H-NS histone family E3160_11750 PF00265 Thymidine kinase E3160_11755 PF00465 Iron-containing alcohol dehydrogenase E3160_11755 PF00171 Aldehyde dehydrogenase family E3160_11760 PF01914 MarC family integral membrane protein E3160_11765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_11770 PF00528 Binding-protein-dependent transport system inner membrane component E3160_11775 PF00528 Binding-protein-dependent transport system inner membrane component E3160_11775 PF12911 N-terminal TM domain of oligopeptide transport permease C E3160_11780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_11780 PF00005 ABC transporter E3160_11785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_11785 PF00005 ABC transporter E3160_11790 PF04269 Protein of unknown function, DUF440 E3160_11795 PF13396 Phospholipase_D-nuclease N-terminal E3160_11795 PF13091 PLD-like domain E3160_11805 PF07885 Ion channel E3160_11805 PF02254 TrkA-N domain E3160_11810 PF03795 YCII-related domain E3160_11815 PF03544 Gram-negative bacterial TonB protein C-terminal E3160_11820 PF03061 Thioesterase superfamily E3160_11825 PF04279 Intracellular septation protein A E3160_11840 PF03922 OmpW family E3160_11845 PF05974 Domain of unknown function (DUF892) E3160_11850 PF05974 Domain of unknown function (DUF892) E3160_11855 PF10685 Stress-induced bacterial acidophilic repeat motif E3160_11860 PF00290 Tryptophan synthase alpha chain E3160_11865 PF00291 Pyridoxal-phosphate dependent enzyme E3160_11870 PF00218 Indole-3-glycerol phosphate synthase E3160_11870 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E3160_11875 PF00117 Glutamine amidotransferase class-I E3160_11875 PF00591 Glycosyl transferase family, a/b domain E3160_11875 PF02885 Glycosyl transferase family, helical bundle domain E3160_11880 PF04715 Anthranilate synthase component I, N terminal region E3160_11880 PF00425 chorismate binding enzyme E3160_11885 PF08255 Trp-operon Leader Peptide E3160_11890 PF02811 PHP domain E3160_11895 PF01300 Telomere recombination E3160_11900 PF09972 Predicted membrane protein (DUF2207) E3160_11905 PF01479 S4 domain E3160_11905 PF00849 RNA pseudouridylate synthase E3160_11910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E3160_11910 PF12557 Cob(I)alamin adenosyltransferase N terminal E3160_11915 PF00106 short chain dehydrogenase E3160_11920 PF01343 Peptidase family S49 E3160_11920 PF08496 Peptidase family S49 N-terminal E3160_11925 PF10692 Protein of unknown function (DUF2498) E3160_11930 PF01131 DNA topoisomerase E3160_11930 PF01751 Toprim domain E3160_11930 PF01396 Topoisomerase DNA binding C4 zinc finger E3160_11930 PF08272 Topoisomerase I zinc-ribbon-like E3160_11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_11935 PF03466 LysR substrate binding domain E3160_11955 PF00330 Aconitase family (aconitate hydratase) E3160_11955 PF00694 Aconitase C-terminal domain E3160_11960 PF00925 GTP cyclohydrolase II E3160_11965 PF01569 PAP2 superfamily E3160_11970 PF06305 Lipopolysaccharide assembly protein A domain E3160_11975 PF18073 Rubredoxin metal binding domain E3160_11980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E3160_11985 PF01253 Translation initiation factor SUI1 E3160_11990 PF05433 Glycine zipper 2TM domain E3160_11995 PF00455 DeoR C terminal sensor domain E3160_11995 PF08220 DeoR-like helix-turn-helix domain E3160_12005 PF00563 EAL domain E3160_12005 PF00990 Diguanylate cyclase, GGDEF domain E3160_12005 PF13426 PAS domain E3160_12010 PF00773 RNB domain E3160_12010 PF08206 Ribonuclease B OB domain E3160_12010 PF17876 Cold shock domain E3160_12010 PF00575 S1 RNA binding domain E3160_12025 PF16295 Tetracyclin repressor-like, C-terminal domain E3160_12025 PF00440 Bacterial regulatory proteins, tetR family E3160_12030 PF00529 HlyD membrane-fusion protein of T1SS E3160_12030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_12035 PF00873 AcrB/AcrD/AcrF family E3160_12040 PF02321 Outer membrane efflux protein E3160_12045 PF07690 Major Facilitator Superfamily E3160_12050 PF00005 ABC transporter E3160_12055 PF00005 ABC transporter E3160_12055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_12060 PF00528 Binding-protein-dependent transport system inner membrane component E3160_12060 PF12911 N-terminal TM domain of oligopeptide transport permease C E3160_12065 PF00528 Binding-protein-dependent transport system inner membrane component E3160_12070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_12075 PF10820 Protein of unknown function (DUF2543) E3160_12080 PF00324 Amino acid permease E3160_12090 PF00120 Glutamine synthetase, catalytic domain E3160_12095 PF07722 Peptidase C26 E3160_12100 PF07883 Cupin domain E3160_12100 PF01381 Helix-turn-helix E3160_12105 PF00171 Aldehyde dehydrogenase family E3160_12110 PF01266 FAD dependent oxidoreductase E3160_12115 PF00202 Aminotransferase class-III E3160_12120 PF02954 Bacterial regulatory protein, Fis family E3160_12120 PF00158 Sigma-54 interaction domain E3160_12125 PF04012 PspA/IM30 family E3160_12130 PF06667 Phage shock protein B E3160_12135 PF04024 PspC domain E3160_12140 PF09584 Phage shock protein PspD (Phageshock_PspD) E3160_12145 PF00581 Rhodanese-like domain E3160_12150 PF00128 Alpha amylase, catalytic domain E3160_12155 PF00128 Alpha amylase, catalytic domain E3160_12165 PF00528 Binding-protein-dependent transport system inner membrane component E3160_12170 PF00528 Binding-protein-dependent transport system inner membrane component E3160_12175 PF00107 Zinc-binding dehydrogenase E3160_12180 PF01261 Xylose isomerase-like TIM barrel E3160_12185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3160_12185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3160_12190 PF03636 Glycosyl hydrolase family 65, N-terminal domain E3160_12190 PF03632 Glycosyl hydrolase family 65 central catalytic domain E3160_12190 PF03633 Glycosyl hydrolase family 65, C-terminal domain E3160_12195 PF13419 Haloacid dehalogenase-like hydrolase E3160_12200 PF03459 TOBE domain E3160_12200 PF17912 MalK OB fold domain E3160_12200 PF00005 ABC transporter E3160_12205 PF09381 Outer membrane protein G (OmpG) E3160_12210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3160_12210 PF00356 Bacterial regulatory proteins, lacI family E3160_12215 PF04317 YcjX-like family, DUF463 E3160_12220 PF05128 Domain of unknown function (DUF697) E3160_12225 PF18024 Helix-turn-helix domain E3160_12225 PF13188 PAS domain E3160_12225 PF00158 Sigma-54 interaction domain E3160_12230 PF08534 Redoxin E3160_12235 PF13378 Enolase C-terminal domain-like E3160_12235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3160_12240 PF00246 Zinc carboxypeptidase E3160_12265 PF12146 Serine aminopeptidase, S33 E3160_12270 PF03466 LysR substrate binding domain E3160_12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_12275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_12280 PF00924 Mechanosensitive ion channel E3160_12285 PF10749 Protein of unknown function (DUF2534) E3160_12290 PF00582 Universal stress protein family E3160_12295 PF00027 Cyclic nucleotide-binding domain E3160_12295 PF00325 Bacterial regulatory proteins, crp family E3160_12300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E3160_12300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3160_12305 PF03806 AbgT putative transporter family E3160_12310 PF01546 Peptidase family M20/M25/M40 E3160_12315 PF01546 Peptidase family M20/M25/M40 E3160_12315 PF07687 Peptidase dimerisation domain E3160_12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_12320 PF03466 LysR substrate binding domain E3160_12325 PF01713 Smr domain E3160_12330 PF00990 Diguanylate cyclase, GGDEF domain E3160_12330 PF08448 PAS fold E3160_12335 PF01544 CorA-like Mg2+ transporter protein E3160_12345 PF00270 DEAD/DEAH box helicase E3160_12345 PF00271 Helicase conserved C-terminal domain E3160_12345 PF03880 DbpA RNA binding domain E3160_12350 PF01171 PP-loop family E3160_12355 PF00589 Phage integrase family E3160_12355 PF12167 Arm DNA-binding domain E3160_12360 PF06806 Putative excisionase (DUF1233) E3160_12365 PF06688 Protein of unknown function (DUF1187) E3160_12375 PF03837 RecT family E3160_12400 PF04181 Rtr1/RPAP2 family E3160_12410 PF09669 Phage regulatory protein Rha (Phage_pRha) E3160_12410 PF10549 ORF11CD3 domain E3160_12415 PF07151 Protein of unknown function (DUF1391) E3160_12435 PF06254 Putative bacterial toxin ydaT E3160_12455 PF01695 IstB-like ATP binding protein E3160_12460 PF07789 Protein of unknown function (DUF1627) E3160_12480 PF01848 Hok/gef family E3160_12500 PF07102 Protein of unknown function (DUF1364) E3160_12525 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase E3160_12540 PF04971 Bacteriophage P21 holin S E3160_12545 PF00959 Phage lysozyme E3160_12580 PF00589 Phage integrase family E3160_12580 PF13356 Arm DNA-binding domain E3160_12640 PF00574 Clp protease E3160_12665 PF00574 Clp protease E3160_12735 PF06316 Enterobacterial Ail/Lom protein E3160_12740 PF03335 Phage tail fibre repeat E3160_12740 PF08400 Prophage tail fibre N-terminal E3160_12740 PF07484 Phage Tail Collar Domain E3160_12765 PF00582 Universal stress protein family E3160_12770 PF00267 Gram-negative porin E3160_12775 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E3160_12775 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E3160_12775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_12775 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E3160_12775 PF10371 Domain of unknown function E3160_12780 PF03891 Domain of unknown function (DUF333) E3160_12785 PF03724 META domain E3160_12790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3160_12790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3160_12795 PF11739 Dicarboxylate transport E3160_12800 PF13617 YnbE-like lipoprotein E3160_12805 PF07027 Protein of unknown function (DUF1318) E3160_12820 PF00248 Aldo/keto reductase family E3160_12825 PF10971 Protein of unknown function (DUF2773) E3160_12830 PF01066 CDP-alcohol phosphatidyltransferase E3160_12840 PF12147 Putative methyltransferase E3160_12840 PF12146 Serine aminopeptidase, S33 E3160_12845 PF00782 Dual specificity phosphatase, catalytic domain E3160_12850 PF02525 Flavodoxin-like fold E3160_12855 PF11898 Domain of unknown function (DUF3418) E3160_12855 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E3160_12855 PF00270 DEAD/DEAH box helicase E3160_12855 PF00271 Helicase conserved C-terminal domain E3160_12855 PF04408 Helicase associated domain (HA2) E3160_12880 PF02698 DUF218 domain E3160_12885 PF00171 Aldehyde dehydrogenase family E3160_12890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E3160_12890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E3160_12895 PF01292 Prokaryotic cytochrome b561 E3160_12905 PF01848 Hok/gef family E3160_12915 PF02203 Tar ligand binding domain homologue E3160_12915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3160_12915 PF00672 HAMP domain E3160_12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_12920 PF03466 LysR substrate binding domain E3160_12925 PF07063 Domain of unknown function (DUF1338) E3160_12930 PF04349 Periplasmic glucan biosynthesis protein, MdoG E3160_12935 PF04325 Protein of unknown function (DUF465) E3160_12940 PF13302 Acetyltransferase (GNAT) domain E3160_12945 PF18836 Beta solenoid repeat from YDCK E3160_12950 PF03595 Voltage-dependent anion channel E3160_12955 PF03848 Tellurite resistance protein TehB E3160_12960 PF11769 Protein of unknown function (DUF3313) E3160_12965 PF03594 Benzoate membrane transport protein E3160_12970 PF01381 Helix-turn-helix E3160_12970 PF07883 Cupin domain E3160_12975 PF12392 Collagenase E3160_12975 PF01136 Peptidase family U32 E3160_12980 PF10829 Protein of unknown function (DUF2554) E3160_12985 PF07927 HicA toxin of bacterial toxin-antitoxin, E3160_12990 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system E3160_12990 PF01381 Helix-turn-helix E3160_12995 PF00155 Aminotransferase class I and II E3160_12995 PF00392 Bacterial regulatory proteins, gntR family E3160_13000 PF13416 Bacterial extracellular solute-binding protein E3160_13005 PF08402 TOBE domain E3160_13005 PF00005 ABC transporter E3160_13010 PF00528 Binding-protein-dependent transport system inner membrane component E3160_13015 PF00528 Binding-protein-dependent transport system inner membrane component E3160_13020 PF00171 Aldehyde dehydrogenase family E3160_13030 PF10753 Toxin GhoT_OrtT E3160_13035 PF10735 Protein of unknown function (DUF2526) E3160_13040 PF04657 Putative inner membrane exporter, YdcZ E3160_13045 PF00583 Acetyltransferase (GNAT) family E3160_13050 PF00107 Zinc-binding dehydrogenase E3160_13050 PF16884 N-terminal domain of oxidoreductase E3160_13055 PF00392 Bacterial regulatory proteins, gntR family E3160_13055 PF07729 FCD domain E3160_13060 PF00593 TonB dependent receptor E3160_13060 PF07715 TonB-dependent Receptor Plug Domain E3160_13070 PF00324 Amino acid permease E3160_13075 PF13417 Glutathione S-transferase, N-terminal domain E3160_13080 PF17520 Family of unknown function (DUF5445) E3160_13085 PF04717 Type VI secretion system, phage-baseplate injector E3160_13090 PF05593 RHS Repeat E3160_13090 PF03527 RHS protein E3160_13090 PF14220 Domain of unknown function (DUF4329) E3160_13120 PF01613 Flavin reductase like domain E3160_13125 PF00797 N-acetyltransferase E3160_13130 PF02567 Phenazine biosynthesis-like protein E3160_13135 PF02665 Nitrate reductase gamma subunit E3160_13140 PF02613 Nitrate reductase delta subunit E3160_13145 PF14711 Respiratory nitrate reductase beta C-terminal E3160_13145 PF13247 4Fe-4S dicluster domain E3160_13150 PF14710 Respiratory nitrate reductase alpha N-terminal E3160_13150 PF01568 Molydopterin dinucleotide binding domain E3160_13150 PF00384 Molybdopterin oxidoreductase E3160_13155 PF07690 Major Facilitator Superfamily E3160_13175 PF00267 Gram-negative porin E3160_13180 PF00892 EamA-like transporter family E3160_13185 PF01568 Molydopterin dinucleotide binding domain E3160_13185 PF00384 Molybdopterin oxidoreductase E3160_13185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_13190 PF00384 Molybdopterin oxidoreductase E3160_13190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_13190 PF01568 Molydopterin dinucleotide binding domain E3160_13195 PF09163 Formate dehydrogenase N, transmembrane E3160_13195 PF13247 4Fe-4S dicluster domain E3160_13195 PF12800 4Fe-4S binding domain E3160_13200 PF01292 Prokaryotic cytochrome b561 E3160_13205 PF01381 Helix-turn-helix E3160_13210 PF08240 Alcohol dehydrogenase GroES-like domain E3160_13210 PF00107 Zinc-binding dehydrogenase E3160_13215 PF00390 Malic enzyme, N-terminal domain E3160_13215 PF03949 Malic enzyme, NAD binding domain E3160_13220 PF08136 30S ribosomal protein subunit S22 family E3160_13225 PF10684 Putative biofilm-dependent modulation protein E3160_13230 PF02566 OsmC-like protein E3160_13235 PF00005 ABC transporter E3160_13235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_13240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_13240 PF00005 ABC transporter E3160_13245 PF12911 N-terminal TM domain of oligopeptide transport permease C E3160_13245 PF00528 Binding-protein-dependent transport system inner membrane component E3160_13250 PF00528 Binding-protein-dependent transport system inner membrane component E3160_13260 PF01427 D-ala-D-ala dipeptidase E3160_13265 PF00990 Diguanylate cyclase, GGDEF domain E3160_13265 PF13426 PAS domain E3160_13265 PF00563 EAL domain E3160_13270 PF00990 Diguanylate cyclase, GGDEF domain E3160_13280 PF13520 Amino acid permease E3160_13285 PF00282 Pyridoxal-dependent decarboxylase conserved domain E3160_13290 PF05193 Peptidase M16 inactive domain E3160_13290 PF00675 Insulinase (Peptidase family M16) E3160_13295 PF07715 TonB-dependent Receptor Plug Domain E3160_13300 PF00005 ABC transporter E3160_13300 PF06472 ABC transporter transmembrane region 2 E3160_13310 PF04055 Radical SAM superfamily E3160_13310 PF13186 Iron-sulfur cluster-binding domain E3160_13315 PF00884 Sulfatase E3160_13320 PF12833 Helix-turn-helix domain E3160_13325 PF17073 Two-component-system connector protein E3160_13330 PF00384 Molybdopterin oxidoreductase E3160_13335 PF09160 FimH, mannose binding E3160_13340 PF00419 Fimbrial protein E3160_13345 PF00419 Fimbrial protein E3160_13350 PF13954 PapC N-terminal domain E3160_13350 PF00577 Outer membrane usher protein E3160_13350 PF13953 PapC C-terminal domain E3160_13355 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_13355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_13360 PF00419 Fimbrial protein E3160_13375 PF07804 HipA-like C-terminal domain E3160_13375 PF13657 HipA N-terminal domain E3160_13380 PF01381 Helix-turn-helix E3160_13385 PF03797 Autotransporter beta-domain E3160_13395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3160_13395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3160_13400 PF04198 Putative sugar-binding domain E3160_13405 PF00005 ABC transporter E3160_13410 PF02653 Branched-chain amino acid transport system / permease component E3160_13415 PF02653 Branched-chain amino acid transport system / permease component E3160_13420 PF13407 Periplasmic binding protein domain E3160_13425 PF01791 DeoC/LacD family aldolase E3160_13430 PF03992 Antibiotic biosynthesis monooxygenase E3160_13435 PF13649 Methyltransferase domain E3160_13440 PF01062 Bestrophin, RFP-TM, chloride channel E3160_13445 PF01232 Mannitol dehydrogenase Rossmann domain E3160_13445 PF08125 Mannitol dehydrogenase C-terminal domain E3160_13450 PF00990 Diguanylate cyclase, GGDEF domain E3160_13455 PF13811 Domain of unknown function (DUF4186) E3160_13460 PF04960 Glutaminase E3160_13465 PF00171 Aldehyde dehydrogenase family E3160_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_13470 PF03466 LysR substrate binding domain E3160_13485 PF07690 Major Facilitator Superfamily E3160_13490 PF01914 MarC family integral membrane protein E3160_13495 PF01047 MarR family E3160_13500 PF12833 Helix-turn-helix domain E3160_13505 PF13999 MarB protein E3160_13510 PF00892 EamA-like transporter family E3160_13515 PF07690 Major Facilitator Superfamily E3160_13525 PF01965 DJ-1/PfpI family E3160_13535 PF00990 Diguanylate cyclase, GGDEF domain E3160_13540 PF04076 Bacterial OB fold (BOF) protein E3160_13545 PF02464 Competence-damaged protein E3160_13550 PF01432 Peptidase family M3 E3160_13555 PF00106 short chain dehydrogenase E3160_13560 PF07729 FCD domain E3160_13560 PF00392 Bacterial regulatory proteins, gntR family E3160_13565 PF14001 YdfZ protein E3160_13570 PF08125 Mannitol dehydrogenase C-terminal domain E3160_13570 PF01232 Mannitol dehydrogenase Rossmann domain E3160_13575 PF00083 Sugar (and other) transporter E3160_13575 PF07690 Major Facilitator Superfamily E3160_13580 PF06183 DinI-like family E3160_13585 PF00872 Transposase, Mutator family E3160_13620 PF06316 Enterobacterial Ail/Lom protein E3160_13680 PF13132 Domain of unknown function (DUF3950) E3160_13715 PF00959 Phage lysozyme E3160_13720 PF07041 Protein of unknown function (DUF1327) E3160_13725 PF04971 Bacteriophage P21 holin S E3160_13740 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase E3160_13760 PF01555 DNA methylase E3160_13775 PF05866 Endodeoxyribonuclease RusA E3160_13780 PF06147 Protein of unknown function (DUF968) E3160_13795 PF01848 Hok/gef family E3160_13815 PF07789 Protein of unknown function (DUF1627) E3160_13845 PF01381 Helix-turn-helix E3160_13880 PF05358 DicB protein E3160_13885 PF07358 Protein of unknown function (DUF1482) E3160_13900 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain E3160_13900 PF00589 Phage integrase family E3160_13955 PF05717 IS66 Orf2 like protein E3160_13960 PF13005 zinc-finger binding domain of transposase IS66 E3160_13960 PF13007 Transposase C of IS166 homeodomain E3160_13960 PF13817 IS66 C-terminal element E3160_13960 PF03050 Transposase IS66 family E3160_13970 PF16809 NleF caspase inhibitor E3160_14010 PF08400 Prophage tail fibre N-terminal E3160_14010 PF03335 Phage tail fibre repeat E3160_14010 PF07484 Phage Tail Collar Domain E3160_14015 PF06316 Enterobacterial Ail/Lom protein E3160_14120 PF13132 Domain of unknown function (DUF3950) E3160_14145 PF00959 Phage lysozyme E3160_14150 PF07041 Protein of unknown function (DUF1327) E3160_14155 PF04971 Bacteriophage P21 holin S E3160_14200 PF05866 Endodeoxyribonuclease RusA E3160_14205 PF06147 Protein of unknown function (DUF968) E3160_14215 PF01848 Hok/gef family E3160_14235 PF07789 Protein of unknown function (DUF1627) E3160_14240 PF01695 IstB-like ATP binding protein E3160_14290 PF05358 DicB protein E3160_14295 PF07358 Protein of unknown function (DUF1482) E3160_14320 PF06183 DinI-like family E3160_14360 PF06316 Enterobacterial Ail/Lom protein E3160_14430 PF03864 Phage major capsid protein E E3160_14440 PF01972 Serine dehydrogenase proteinase E3160_14440 PF01957 NfeD-like C-terminal, partner-binding E3160_14450 PF02831 gpW E3160_14455 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3160_14460 PF07471 Phage DNA packaging protein Nu1 E3160_14470 PF13132 Domain of unknown function (DUF3950) E3160_14475 PF06069 PerC transcriptional activator E3160_14480 PF06085 Lipoprotein Rz1 precursor E3160_14495 PF00959 Phage lysozyme E3160_14500 PF07041 Protein of unknown function (DUF1327) E3160_14505 PF04971 Bacteriophage P21 holin S E3160_14535 PF12833 Helix-turn-helix domain E3160_14550 PF05866 Endodeoxyribonuclease RusA E3160_14555 PF06147 Protein of unknown function (DUF968) E3160_14565 PF04076 Bacterial OB fold (BOF) protein E3160_14570 PF01848 Hok/gef family E3160_14600 PF12167 Arm DNA-binding domain E3160_14600 PF00589 Phage integrase family E3160_14610 PF00107 Zinc-binding dehydrogenase E3160_14610 PF08240 Alcohol dehydrogenase GroES-like domain E3160_14615 PF13378 Enolase C-terminal domain-like E3160_14615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3160_14620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E3160_14625 PF06932 Protein of unknown function (DUF1283) E3160_14630 PF13302 Acetyltransferase (GNAT) domain E3160_14635 PF06788 Uncharacterised protein family (UPF0257) E3160_14640 PF06649 Protein of unknown function (DUF1161) E3160_14645 PF00384 Molybdopterin oxidoreductase E3160_14645 PF01568 Molydopterin dinucleotide binding domain E3160_14645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_14650 PF00384 Molybdopterin oxidoreductase E3160_14650 PF01568 Molydopterin dinucleotide binding domain E3160_14650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_14655 PF13247 4Fe-4S dicluster domain E3160_14655 PF12800 4Fe-4S binding domain E3160_14660 PF04976 DMSO reductase anchor subunit (DmsC) E3160_14665 PF02613 Nitrate reductase delta subunit E3160_14670 PF00654 Voltage gated chloride channel E3160_14680 PF00480 ROK family E3160_14685 PF03466 LysR substrate binding domain E3160_14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_14690 PF07690 Major Facilitator Superfamily E3160_14705 PF00089 Trypsin E3160_14710 PF00893 Small Multidrug Resistance protein E3160_14715 PF00893 Small Multidrug Resistance protein E3160_14725 PF01594 AI-2E family transporter E3160_14730 PF02233 NAD(P) transhydrogenase beta subunit E3160_14735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E3160_14735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E3160_14735 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E3160_14740 PF07338 Protein of unknown function (DUF1471) E3160_14745 PF13520 Amino acid permease E3160_14755 PF06942 GlpM protein E3160_14760 PF00486 Transcriptional regulatory protein, C terminal E3160_14760 PF00072 Response regulator receiver domain E3160_14765 PF00672 HAMP domain E3160_14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_14765 PF00512 His Kinase A (phospho-acceptor) domain E3160_14770 PF05472 DNA replication terminus site-binding protein (Ter protein) E3160_14775 PF10415 Fumarase C C-terminus E3160_14775 PF00206 Lyase E3160_14780 PF05681 Fumarate hydratase (Fumerase) E3160_14780 PF05683 Fumarase C-terminus E3160_14785 PF01238 Phosphomannose isomerase type I E3160_14790 PF06097 Bacterial protein of unknown function (DUF945) E3160_14805 PF00703 Glycosyl hydrolases family 2 E3160_14805 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E3160_14805 PF02837 Glycosyl hydrolases family 2, sugar binding domain E3160_14810 PF00440 Bacterial regulatory proteins, tetR family E3160_14820 PF00356 Bacterial regulatory proteins, lacI family E3160_14820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3160_14825 PF02378 Phosphotransferase system, EIIC E3160_14825 PF00367 phosphotransferase system, EIIB E3160_14830 PF00155 Aminotransferase class I and II E3160_14835 PF00962 Adenosine/AMP deaminase E3160_14840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3160_14840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3160_14850 PF05321 Haemolysin expression modulating protein E3160_14855 PF10754 Protein of unknown function (DUF2569) E3160_14860 PF02508 Rnf-Nqr subunit, membrane protein E3160_14865 PF04060 Putative Fe-S cluster E3160_14870 PF13375 RnfC Barrel sandwich hybrid domain E3160_14870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E3160_14870 PF10531 SLBB domain E3160_14870 PF12838 4Fe-4S dicluster domain E3160_14875 PF03116 NQR2, RnfD, RnfE family E3160_14880 PF04205 FMN-binding domain E3160_14885 PF02508 Rnf-Nqr subunit, membrane protein E3160_14890 PF10576 Iron-sulfur binding domain of endonuclease III E3160_14890 PF00633 Helix-hairpin-helix motif E3160_14890 PF00730 HhH-GPD superfamily base excision DNA repair protein E3160_14895 PF00854 POT family E3160_14900 PF02798 Glutathione S-transferase, N-terminal domain E3160_14900 PF00043 Glutathione S-transferase, C-terminal domain E3160_14905 PF08543 Phosphomethylpyrimidine kinase E3160_14910 PF00579 tRNA synthetases class I (W and Y) E3160_14910 PF01479 S4 domain E3160_14915 PF01243 Pyridoxamine 5'-phosphate oxidase E3160_14915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E3160_14920 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme E3160_14925 PF03702 Anhydro-N-acetylmuramic acid kinase E3160_14930 PF05433 Glycine zipper 2TM domain E3160_14935 PF01047 MarR family E3160_14940 PF07869 Protein of unknown function (DUF1656) E3160_14945 PF00529 HlyD membrane-fusion protein of T1SS E3160_14945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_14950 PF04632 Fusaric acid resistance protein family E3160_14955 PF00080 Copper/zinc superoxide dismutase (SODC) E3160_14960 PF00248 Aldo/keto reductase family E3160_14965 PF06945 Protein of unknown function (DUF1289) E3160_14970 PF16925 Tetracyclin repressor-like, C-terminal domain E3160_14970 PF00440 Bacterial regulatory proteins, tetR family E3160_14975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E3160_14980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3160_14985 PF00929 Exonuclease E3160_14990 PF00270 DEAD/DEAH box helicase E3160_14990 PF00271 Helicase conserved C-terminal domain E3160_14990 PF08494 DEAD/H associated E3160_14995 PF00462 Glutaredoxin E3160_15000 PF00877 NlpC/P60 family E3160_15005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E3160_15005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E3160_15010 PF07690 Major Facilitator Superfamily E3160_15020 PF00356 Bacterial regulatory proteins, lacI family E3160_15025 PF03466 LysR substrate binding domain E3160_15025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_15030 PF07690 Major Facilitator Superfamily E3160_15040 PF00677 Lumazine binding domain E3160_15045 PF01554 MatE E3160_15050 PF16168 Adhesin of bacterial autotransporter system, probable stalk E3160_15050 PF03212 Pertactin E3160_15070 PF08803 Putative mono-oxygenase ydhR E3160_15075 PF13454 FAD-NAD(P)-binding E3160_15085 PF01292 Prokaryotic cytochrome b561 E3160_15090 PF13247 4Fe-4S dicluster domain E3160_15100 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 E3160_15100 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain E3160_15105 PF13247 4Fe-4S dicluster domain E3160_15105 PF12800 4Fe-4S binding domain E3160_15110 PF10965 Protein of unknown function (DUF2767) E3160_15115 PF02887 Pyruvate kinase, alpha/beta domain E3160_15115 PF00224 Pyruvate kinase, barrel domain E3160_15120 PF04728 Lipoprotein leucine-zipper E3160_15125 PF17969 L,D-transpeptidase C-terminal domain E3160_15125 PF01476 LysM domain E3160_15125 PF03734 L,D-transpeptidase catalytic domain E3160_15130 PF02657 Fe-S metabolism associated domain E3160_15135 PF00266 Aminotransferase class-V E3160_15140 PF01458 Uncharacterized protein family (UPF0051) E3160_15145 PF00005 ABC transporter E3160_15150 PF01458 Uncharacterized protein family (UPF0051) E3160_15155 PF01521 Iron-sulphur cluster biosynthesis E3160_15160 PF15930 Domain of unknown function E3160_15165 PF03061 Thioesterase superfamily E3160_15170 PF02913 FAD linked oxidases, C-terminal domain E3160_15170 PF13183 4Fe-4S dicluster domain E3160_15170 PF01565 FAD binding domain E3160_15175 PF01594 AI-2E family transporter E3160_15185 PF08965 Domain of unknown function (DUF1870) E3160_15190 PF07690 Major Facilitator Superfamily E3160_15195 PF07690 Major Facilitator Superfamily E3160_15200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E3160_15200 PF08501 Shikimate dehydrogenase substrate binding domain E3160_15205 PF01487 Type I 3-dehydroquinase E3160_15210 PF01144 Coenzyme A transferase E3160_15215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3160_15215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3160_15215 PF02770 Acyl-CoA dehydrogenase, middle domain E3160_15220 PF02311 AraC-like ligand binding domain E3160_15220 PF12833 Helix-turn-helix domain E3160_15225 PF01012 Electron transfer flavoprotein domain E3160_15230 PF00766 Electron transfer flavoprotein FAD-binding domain E3160_15230 PF01012 Electron transfer flavoprotein domain E3160_15235 PF01494 FAD binding domain E3160_15245 PF13193 AMP-binding enzyme C-terminal domain E3160_15245 PF00501 AMP-binding enzyme E3160_15250 PF00391 PEP-utilising enzyme, mobile domain E3160_15250 PF02896 PEP-utilising enzyme, TIM barrel domain E3160_15250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E3160_15255 PF03618 Kinase/pyrophosphorylase E3160_15260 PF00793 DAHP synthetase I family E3160_15265 PF10636 Hemin uptake protein hemP E3160_15270 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E3160_15275 PF00563 EAL domain E3160_15280 PF00877 NlpC/P60 family E3160_15285 PF00005 ABC transporter E3160_15290 PF00255 Glutathione peroxidase E3160_15295 PF01032 FecCD transport family E3160_15300 PF00216 Bacterial DNA-binding protein E3160_15305 PF03147 Ferredoxin-fold anticodon binding domain E3160_15305 PF03484 tRNA synthetase B5 domain E3160_15305 PF01588 Putative tRNA binding domain E3160_15305 PF03483 B3/4 domain E3160_15305 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E3160_15310 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E3160_15310 PF01409 tRNA synthetases class II core domain (F) E3160_15320 PF00453 Ribosomal protein L20 E3160_15325 PF01632 Ribosomal protein L35 E3160_15330 PF05198 Translation initiation factor IF-3, N-terminal domain E3160_15330 PF00707 Translation initiation factor IF-3, C-terminal domain E3160_15335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3160_15335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3160_15335 PF03129 Anticodon binding domain E3160_15335 PF02824 TGS domain E3160_15350 PF04338 Protein of unknown function, DUF481 E3160_15355 PF00294 pfkB family carbohydrate kinase E3160_15360 PF11080 Endoribonuclease GhoS E3160_15365 PF03881 Fructosamine kinase E3160_15370 PF14002 YniB-like protein E3160_15375 PF13419 Haloacid dehalogenase-like hydrolase E3160_15380 PF04307 LexA-binding, inner membrane-associated putative hydrolase E3160_15395 PF10729 Cell division activator CedA E3160_15400 PF00199 Catalase E3160_15400 PF06628 Catalase-related immune-responsive E3160_15400 PF18011 C-terminal domain found in long catalases E3160_15405 PF04794 YdjC-like protein E3160_15410 PF02056 Family 4 glycosyl hydrolase E3160_15410 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3160_15415 PF12833 Helix-turn-helix domain E3160_15415 PF07883 Cupin domain E3160_15420 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E3160_15425 PF02378 Phosphotransferase system, EIIC E3160_15430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_15440 PF04355 SmpA / OmlA family E3160_15445 PF02540 NAD synthase E3160_15455 PF05962 HutD E3160_15460 PF07813 LTXXQ motif family protein E3160_15465 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E3160_15470 PF04996 Succinylarginine dihydrolase E3160_15475 PF00171 Aldehyde dehydrogenase family E3160_15480 PF04958 Arginine N-succinyltransferase beta subunit E3160_15485 PF00202 Aminotransferase class-III E3160_15490 PF03372 Endonuclease/Exonuclease/phosphatase family E3160_15495 PF09335 SNARE associated Golgi protein E3160_15505 PF09335 SNARE associated Golgi protein E3160_15510 PF02627 Carboxymuconolactone decarboxylase family E3160_15515 PF13416 Bacterial extracellular solute-binding protein E3160_15520 PF00528 Binding-protein-dependent transport system inner membrane component E3160_15525 PF00005 ABC transporter E3160_15530 PF00581 Rhodanese-like domain E3160_15535 PF01066 CDP-alcohol phosphatidyltransferase E3160_15540 PF00293 NUDIX domain E3160_15545 PF07383 Protein of unknown function (DUF1496) E3160_15550 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E3160_15550 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E3160_15555 PF06889 Protein of unknown function (DUF1266) E3160_15560 PF01751 Toprim domain E3160_15560 PF01131 DNA topoisomerase E3160_15565 PF02769 AIR synthase related protein, C-terminal domain E3160_15565 PF00586 AIR synthase related protein, N-terminal domain E3160_15570 PF00881 Nitroreductase family E3160_15575 PF01343 Peptidase family S49 E3160_15585 PF17763 Glutaminase/Asparaginase C-terminal domain E3160_15585 PF00710 Asparaginase, N-terminal E3160_15590 PF00857 Isochorismatase family E3160_15595 PF00083 Sugar (and other) transporter E3160_15600 PF08220 DeoR-like helix-turn-helix domain E3160_15600 PF00455 DeoR C terminal sensor domain E3160_15605 PF00248 Aldo/keto reductase family E3160_15610 PF00294 pfkB family carbohydrate kinase E3160_15615 PF01116 Fructose-bisphosphate aldolase class-II E3160_15620 PF08240 Alcohol dehydrogenase GroES-like domain E3160_15620 PF00107 Zinc-binding dehydrogenase E3160_15625 PF00083 Sugar (and other) transporter E3160_15630 PF08240 Alcohol dehydrogenase GroES-like domain E3160_15630 PF00107 Zinc-binding dehydrogenase E3160_15635 PF07023 Protein of unknown function (DUF1315) E3160_15640 PF01641 SelR domain E3160_15645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E3160_15645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E3160_15650 PF01263 Aldose 1-epimerase E3160_15655 PF00248 Aldo/keto reductase family E3160_15660 PF06629 MltA-interacting protein MipA E3160_15665 PF06798 PrkA serine protein kinase C-terminal domain E3160_15665 PF08298 PrkA AAA domain E3160_15670 PF04285 Protein of unknown function (DUF444) E3160_15675 PF00990 Diguanylate cyclase, GGDEF domain E3160_15675 PF17158 Membrane-associated sensor, integral membrane domain E3160_15680 PF17155 Gammaproteobacterial periplasmic sensor domain E3160_15680 PF00990 Diguanylate cyclase, GGDEF domain E3160_15685 PF04073 Aminoacyl-tRNA editing domain E3160_15695 PF04284 Protein of unknown function (DUF441) E3160_15700 PF12833 Helix-turn-helix domain E3160_15700 PF02311 AraC-like ligand binding domain E3160_15705 PF07690 Major Facilitator Superfamily E3160_15710 PF04343 Protein of unknown function, DUF488 E3160_15715 PF03891 Domain of unknown function (DUF333) E3160_15720 PF13185 GAF domain E3160_15720 PF00990 Diguanylate cyclase, GGDEF domain E3160_15735 PF04226 Transglycosylase associated protein E3160_15740 PF08956 Domain of unknown function (DUF1869) E3160_15745 PF09313 Domain of unknown function (DUF1971) E3160_15750 PF01810 LysE type translocator E3160_15755 PF03466 LysR substrate binding domain E3160_15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_15760 PF00180 Isocitrate/isopropylmalate dehydrogenase E3160_15765 PF02028 BCCT, betaine/carnitine/choline family transporter E3160_15770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) E3160_15770 PF00355 Rieske [2Fe-2S] domain E3160_15775 PF00970 Oxidoreductase FAD-binding domain E3160_15775 PF00111 2Fe-2S iron-sulfur cluster binding domain E3160_15775 PF00175 Oxidoreductase NAD-binding domain E3160_15780 PF00570 HRDC domain E3160_15780 PF01612 3'-5' exonuclease E3160_15785 PF13193 AMP-binding enzyme C-terminal domain E3160_15785 PF00501 AMP-binding enzyme E3160_15790 PF03843 Outer membrane lipoprotein Slp family E3160_15795 PF00814 Glycoprotease family E3160_15800 PF04851 Type III restriction enzyme, res subunit E3160_15800 PF13307 Helicase C-terminal domain E3160_15805 PF01042 Endoribonuclease L-PSP E3160_15810 PF08986 Domain of unknown function (DUF1889) E3160_15815 PF03701 Uncharacterised protein family (UPF0181) E3160_15820 PF00425 chorismate binding enzyme E3160_15820 PF04715 Anthranilate synthase component I, N terminal region E3160_15825 PF00293 NUDIX domain E3160_15830 PF03313 Serine dehydratase alpha chain E3160_15830 PF03315 Serine dehydratase beta chain E3160_15835 PF12792 CSS motif domain associated with EAL E3160_15835 PF00563 EAL domain E3160_15840 PF03471 Transporter associated domain E3160_15840 PF03741 Integral membrane protein TerC family E3160_15845 PF03830 PTS system sorbose subfamily IIB component E3160_15845 PF03610 PTS system fructose IIA component E3160_15850 PF03609 PTS system sorbose-specific iic component E3160_15855 PF03613 PTS system mannose/fructose/sorbose family IID component E3160_15860 PF06173 Protein of unknown function (DUF986) E3160_15865 PF02659 Putative manganese efflux pump E3160_15870 PF13847 Methyltransferase domain E3160_15875 PF00313 'Cold-shock' DNA-binding domain E3160_15880 PF10736 Protein of unknown function (DUF2627) E3160_15885 PF13974 YebO-like protein E3160_15890 PF13998 MgrB protein E3160_15895 PF13996 YobH-like protein E3160_15900 PF09339 IclR helix-turn-helix domain E3160_15900 PF01614 Bacterial transcriptional regulator E3160_15905 PF07690 Major Facilitator Superfamily E3160_15910 PF01435 Peptidase family M48 E3160_15915 PF00595 PDZ domain E3160_15915 PF11818 C-terminal domain of tail specific protease (DUF3340) E3160_15915 PF17804 Tail specific protease N-terminal domain E3160_15915 PF03572 Peptidase family S41 E3160_15920 PF04352 ProQ/FINO family E3160_15920 PF17516 ProQ C-terminal domain E3160_15925 PF13185 GAF domain E3160_15930 PF04403 Paraquat-inducible protein A E3160_15935 PF02470 MlaD protein E3160_15940 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E3160_15940 PF01189 16S rRNA methyltransferase RsmB/F E3160_15940 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E3160_15945 PF07351 Protein of unknown function (DUF1480) E3160_15950 PF07358 Protein of unknown function (DUF1482) E3160_15955 PF00149 Calcineurin-like phosphoesterase E3160_15960 PF10709 Protein of unknown function (DUF2511) E3160_15965 PF05425 Copper resistance protein D E3160_15970 PF04234 CopC domain E3160_15975 PF06440 DNA polymerase III, theta subunit E3160_15980 PF00795 Carbon-nitrogen hydrolase E3160_15985 PF00929 Exonuclease E3160_15990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E3160_15990 PF00326 Prolyl oligopeptidase family E3160_15995 PF04391 Protein of unknown function (DUF533) E3160_16000 PF13995 YebF-like protein E3160_16005 PF07130 YebG protein E3160_16010 PF02222 ATP-grasp domain E3160_16015 PF01081 KDPG and KHG aldolase E3160_16020 PF00920 Dehydratase family E3160_16025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain E3160_16025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain E3160_16030 PF01380 SIS domain E3160_16030 PF01418 Helix-turn-helix domain, rpiR family E3160_16035 PF00224 Pyruvate kinase, barrel domain E3160_16035 PF02887 Pyruvate kinase, alpha/beta domain E3160_16040 PF03279 Bacterial lipid A biosynthesis acyltransferase E3160_16045 PF01476 LysM domain E3160_16045 PF01551 Peptidase family M23 E3160_16045 PF08525 Opacity-associated protein A N-terminal motif E3160_16050 PF01297 Zinc-uptake complex component A periplasmic E3160_16055 PF00005 ABC transporter E3160_16060 PF00950 ABC 3 transport family E3160_16065 PF05491 RuvB C-terminal winged helix domain E3160_16065 PF17864 RuvB AAA lid domain E3160_16065 PF05496 Holliday junction DNA helicase RuvB P-loop domain E3160_16070 PF07499 RuvA, C-terminal domain E3160_16070 PF01330 RuvA N terminal domain E3160_16080 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family E3160_16085 PF02075 Crossover junction endodeoxyribonuclease RuvC E3160_16090 PF01709 Transcriptional regulator E3160_16095 PF00293 NUDIX domain E3160_16100 PF01336 OB-fold nucleic acid binding domain E3160_16100 PF00152 tRNA synthetases class II (D, K and N) E3160_16100 PF02938 GAD domain E3160_16105 PF00857 Isochorismatase family E3160_16110 PF01904 Protein of unknown function DUF72 E3160_16115 PF01124 MAPEG family E3160_16120 PF13649 Methyltransferase domain E3160_16125 PF08003 Protein of unknown function (DUF1698) E3160_16130 PF01568 Molydopterin dinucleotide binding domain E3160_16130 PF18364 Molybdopterin oxidoreductase N-terminal domain E3160_16130 PF00384 Molybdopterin oxidoreductase E3160_16135 PF03264 NapC/NirT cytochrome c family, N-terminal region E3160_16140 PF03932 CutC family E3160_16145 PF06185 YecM protein E3160_16150 PF03485 Arginyl tRNA synthetase N terminal domain E3160_16150 PF05746 DALR anticodon binding domain E3160_16150 PF00750 tRNA synthetases class I (R) E3160_16155 PF07007 Lysozyme inhibitor LprI E3160_16160 PF06366 Flagellar protein FlhE E3160_16165 PF00771 FHIPEP family E3160_16170 PF01312 FlhB HrpN YscU SpaS Family E3160_16175 PF04344 Chemotaxis phosphatase, CheZ E3160_16180 PF00072 Response regulator receiver domain E3160_16185 PF00072 Response regulator receiver domain E3160_16185 PF01339 CheB methylesterase E3160_16190 PF01739 CheR methyltransferase, SAM binding domain E3160_16190 PF03705 CheR methyltransferase, all-alpha domain E3160_16195 PF02203 Tar ligand binding domain homologue E3160_16195 PF00672 HAMP domain E3160_16195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3160_16200 PF00672 HAMP domain E3160_16200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3160_16200 PF02203 Tar ligand binding domain homologue E3160_16205 PF01584 CheW-like domain E3160_16210 PF02895 Signal transducing histidine kinase, homodimeric domain E3160_16210 PF09078 CheY binding E3160_16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_16210 PF01627 Hpt domain E3160_16210 PF01584 CheW-like domain E3160_16215 PF13677 Membrane MotB of proton-channel complex MotA/MotB E3160_16215 PF00691 OmpA family E3160_16220 PF01618 MotA/TolQ/ExbB proton channel family E3160_16225 PF05280 Flagellar transcriptional activator (FlhC) E3160_16230 PF05247 Flagellar transcriptional activator (FlhD) E3160_16235 PF00582 Universal stress protein family E3160_16240 PF00982 Glycosyltransferase family 20 E3160_16245 PF02358 Trehalose-phosphatase E3160_16250 PF02653 Branched-chain amino acid transport system / permease component E3160_16255 PF00005 ABC transporter E3160_16260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3160_16265 PF00210 Ferritin-like domain E3160_16270 PF10964 Protein of unknown function (DUF2766) E3160_16280 PF13992 YecR-like lipoprotein E3160_16285 PF00210 Ferritin-like domain E3160_16290 PF10678 Protein of unknown function (DUF2492) E3160_16295 PF03222 Tryptophan/tyrosine permease family E3160_16300 PF03695 Uncharacterised protein family (UPF0149) E3160_16300 PF02810 SEC-C motif E3160_16305 PF02899 Phage integrase, N-terminal SAM-like domain E3160_16305 PF00589 Phage integrase family E3160_16385 PF05840 Bacteriophage replication gene A protein (GPA) E3160_16390 PF06406 StbA protein E3160_16395 PF10784 Plasmid stability protein E3160_16490 PF03335 Phage tail fibre repeat E3160_16490 PF07484 Phage Tail Collar Domain E3160_16490 PF07484 Phage Tail Collar Domain E3160_16490 PF08400 Prophage tail fibre N-terminal E3160_16490 PF03335 Phage tail fibre repeat E3160_16490 PF08400 Prophage tail fibre N-terminal E3160_16500 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3160_16575 PF01066 CDP-alcohol phosphatidyltransferase E3160_16580 PF02151 UvrB/uvrC motif E3160_16580 PF01541 GIY-YIG catalytic domain E3160_16580 PF08459 UvrC Helix-hairpin-helix N-terminal E3160_16585 PF00072 Response regulator receiver domain E3160_16585 PF00196 Bacterial regulatory proteins, luxR family E3160_16600 PF10769 Protein of unknown function (DUF2594) E3160_16605 PF00196 Bacterial regulatory proteins, luxR family E3160_16605 PF03472 Autoinducer binding domain E3160_16620 PF00291 Pyridoxal-phosphate dependent enzyme E3160_16630 PF02899 Phage integrase, N-terminal SAM-like domain E3160_16635 PF04545 Sigma-70, region 4 E3160_16635 PF04539 Sigma-70 region 3 E3160_16635 PF04542 Sigma-70 region 2 E3160_16640 PF00700 Bacterial flagellin C-terminal helical region E3160_16640 PF12445 Flagellin protein E3160_16640 PF00669 Bacterial flagellin N-terminal helical region E3160_16645 PF02465 Flagellar hook-associated protein 2 N-terminus E3160_16645 PF07195 Flagellar hook-associated protein 2 C-terminus E3160_16650 PF02561 Flagellar protein FliS E3160_16655 PF05400 Flagellar protein FliT E3160_16660 PF02806 Alpha amylase, C-terminal all-beta domain E3160_16660 PF00128 Alpha amylase, catalytic domain E3160_16665 PF13987 YedD-like protein E3160_16670 PF04143 Sulphur transport E3160_16675 PF01206 Sulfurtransferase TusA E3160_16680 PF02586 SOS response associated peptidase (SRAP) E3160_16685 PF00583 Acetyltransferase (GNAT) family E3160_16690 PF17607 Family of unknown function (DUF5503) E3160_16700 PF00583 Acetyltransferase (GNAT) family E3160_16705 PF17607 Family of unknown function (DUF5503) E3160_16715 PF02049 Flagellar hook-basal body complex protein FliE E3160_16720 PF01514 Secretory protein of YscJ/FliF family E3160_16720 PF08345 Flagellar M-ring protein C-terminal E3160_16725 PF01706 FliG C-terminal domain E3160_16725 PF14842 FliG N-terminal domain E3160_16725 PF14841 FliG middle domain E3160_16730 PF02108 Flagellar assembly protein FliH E3160_16735 PF18269 T3SS EscN ATPase C-terminal domain E3160_16735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3160_16740 PF02050 Flagellar FliJ protein E3160_16745 PF02120 Flagellar hook-length control protein FliK E3160_16750 PF03748 Flagellar basal body-associated protein FliL E3160_16755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3160_16755 PF02154 Flagellar motor switch protein FliM E3160_16760 PF16973 Flagellar motor switch protein FliN N-terminal E3160_16760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3160_16765 PF04347 Flagellar biosynthesis protein, FliO E3160_16770 PF00813 FliP family E3160_16775 PF01313 Bacterial export proteins, family 3 E3160_16780 PF01311 Bacterial export proteins, family 1 E3160_16785 PF00196 Bacterial regulatory proteins, luxR family E3160_16790 PF10781 Dextransucrase DSRB E3160_16800 PF10733 Protein of unknown function (DUF2525) E3160_16810 PF00990 Diguanylate cyclase, GGDEF domain E3160_16810 PF17151 Periplasmic sensor domain E3160_16815 PF09926 Uncharacterized small protein (DUF2158) E3160_16820 PF05661 Protein of unknown function (DUF808) E3160_16825 PF00892 EamA-like transporter family E3160_16830 PF03852 DNA mismatch endonuclease Vsr E3160_16835 PF00145 C-5 cytosine-specific DNA methylase E3160_16835 PF18284 DNA methylase N-terminal domain E3160_16840 PF01966 HD domain E3160_16850 PF00267 Gram-negative porin E3160_16855 PF00267 Gram-negative porin E3160_16880 PF00512 His Kinase A (phospho-acceptor) domain E3160_16880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_16885 PF00486 Transcriptional regulatory protein, C terminal E3160_16885 PF00072 Response regulator receiver domain E3160_16890 PF00576 HIUase/Transthyretin family E3160_16895 PF00174 Oxidoreductase molybdopterin binding domain E3160_16900 PF01794 Ferric reductase like transmembrane component E3160_16905 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment E3160_16910 PF01292 Prokaryotic cytochrome b561 E3160_16925 PF04806 EspF protein repeat E3160_16935 PF07484 Phage Tail Collar Domain E3160_16935 PF08400 Prophage tail fibre N-terminal E3160_16935 PF03335 Phage tail fibre repeat E3160_16940 PF06316 Enterobacterial Ail/Lom protein E3160_16950 PF00080 Copper/zinc superoxide dismutase (SODC) E3160_17000 PF03864 Phage major capsid protein E E3160_17010 PF01343 Peptidase family S49 E3160_17020 PF02831 gpW E3160_17030 PF07471 Phage DNA packaging protein Nu1 E3160_17035 PF13132 Domain of unknown function (DUF3950) E3160_17040 PF06069 PerC transcriptional activator E3160_17045 PF06085 Lipoprotein Rz1 precursor E3160_17065 PF00959 Phage lysozyme E3160_17070 PF07041 Protein of unknown function (DUF1327) E3160_17075 PF04971 Bacteriophage P21 holin S E3160_17080 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase E3160_17120 PF05866 Endodeoxyribonuclease RusA E3160_17125 PF06147 Protein of unknown function (DUF968) E3160_17140 PF01848 Hok/gef family E3160_17175 PF07789 Protein of unknown function (DUF1627) E3160_17205 PF07151 Protein of unknown function (DUF1391) E3160_17210 PF05358 DicB protein E3160_17215 PF07358 Protein of unknown function (DUF1482) E3160_17240 PF06167 Glucose-regulated metallo-peptidase M90 E3160_17265 PF00083 Sugar (and other) transporter E3160_17265 PF07690 Major Facilitator Superfamily E3160_17270 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus E3160_17270 PF01048 Phosphorylase superfamily E3160_17275 PF01709 Transcriptional regulator E3160_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_17295 PF03466 LysR substrate binding domain E3160_17300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_17300 PF03466 LysR substrate binding domain E3160_17310 PF03734 L,D-transpeptidase catalytic domain E3160_17310 PF17969 L,D-transpeptidase C-terminal domain E3160_17315 PF02277 Phosphoribosyltransferase E3160_17320 PF02654 Cobalamin-5-phosphate synthase E3160_17325 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase E3160_17340 PF05717 IS66 Orf2 like protein E3160_17345 PF03050 Transposase IS66 family E3160_17345 PF13817 IS66 C-terminal element E3160_17345 PF13007 Transposase C of IS166 homeodomain E3160_17345 PF13005 zinc-finger binding domain of transposase IS66 E3160_17360 PF07715 TonB-dependent Receptor Plug Domain E3160_17470 PF13990 YjcZ-like protein E3160_17495 PF06067 Domain of unknown function (DUF932) E3160_17500 PF03230 Antirestriction protein E3160_17505 PF04002 RadC-like JAB domain E3160_17510 PF06174 Protein of unknown function (DUF987) E3160_17515 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E3160_17540 PF10662 Ethanolamine utilisation - propanediol utilisation E3160_17545 PF04363 Protein of unknown function (DUF496) E3160_17550 PF04632 Fusaric acid resistance protein family E3160_17555 PF06445 GyrI-like small molecule binding domain E3160_17560 PF00768 D-alanyl-D-alanine carboxypeptidase E3160_17560 PF07943 Penicillin-binding protein 5, C-terminal domain E3160_17565 PF08411 Exonuclease C-terminal E3160_17565 PF00929 Exonuclease E3160_17570 PF01206 Sulfurtransferase TusA E3160_17575 PF04143 Sulphur transport E3160_17580 PF13520 Amino acid permease E3160_17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_17590 PF03466 LysR substrate binding domain E3160_17595 PF01370 NAD dependent epimerase/dehydratase family E3160_17605 PF01634 ATP phosphoribosyltransferase E3160_17605 PF08029 HisG, C-terminal domain E3160_17610 PF00815 Histidinol dehydrogenase E3160_17615 PF00155 Aminotransferase class I and II E3160_17620 PF00475 Imidazoleglycerol-phosphate dehydratase E3160_17620 PF08645 Polynucleotide kinase 3 phosphatase E3160_17625 PF00117 Glutamine amidotransferase class-I E3160_17630 PF00977 Histidine biosynthesis protein E3160_17635 PF00977 Histidine biosynthesis protein E3160_17640 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E3160_17640 PF01502 Phosphoribosyl-AMP cyclohydrolase E3160_17650 PF02706 Chain length determinant protein E3160_17655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E3160_17655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E3160_17655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E3160_17660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain E3160_17660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3160_17665 PF17836 PglD N-terminal domain E3160_17665 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_17665 PF14602 Hexapeptide repeat of succinyl-transferase E3160_17675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3160_17675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3160_17675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3160_17675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3160_17680 PF01050 Mannose-6-phosphate isomerase E3160_17680 PF00483 Nucleotidyl transferase E3160_17685 PF00293 NUDIX domain E3160_17690 PF01370 NAD dependent epimerase/dehydratase family E3160_17695 PF16363 GDP-mannose 4,6 dehydratase E3160_17705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3160_17725 PF00535 Glycosyl transferase family 2 E3160_17730 PF00483 Nucleotidyl transferase E3160_17735 PF01370 NAD dependent epimerase/dehydratase family E3160_17745 PF13439 Glycosyltransferase Family 4 E3160_17745 PF00534 Glycosyl transferases group 1 E3160_17750 PF04230 Polysaccharide pyruvyl transferase E3160_17760 PF02397 Bacterial sugar transferase E3160_17765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3160_17765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3160_17765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3160_17765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3160_17770 PF00483 Nucleotidyl transferase E3160_17770 PF01050 Mannose-6-phosphate isomerase E3160_17775 PF00534 Glycosyl transferases group 1 E3160_17775 PF13579 Glycosyl transferase 4-like domain E3160_17780 PF00293 NUDIX domain E3160_17785 PF01370 NAD dependent epimerase/dehydratase family E3160_17790 PF16363 GDP-mannose 4,6 dehydratase E3160_17795 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_17800 PF00535 Glycosyl transferase family 2 E3160_17810 PF00534 Glycosyl transferases group 1 E3160_17810 PF13439 Glycosyltransferase Family 4 E3160_17815 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_17820 PF00535 Glycosyl transferase family 2 E3160_17825 PF13807 G-rich domain on putative tyrosine kinase E3160_17825 PF02706 Chain length determinant protein E3160_17825 PF13614 AAA domain E3160_17830 PF01451 Low molecular weight phosphotyrosine protein phosphatase E3160_17835 PF02563 Polysaccharide biosynthesis/export protein E3160_17835 PF18412 Outer-membrane lipoprotein Wza C-terminal domain E3160_17835 PF10531 SLBB domain E3160_17840 PF03741 Integral membrane protein TerC family E3160_17840 PF03471 Transporter associated domain E3160_17840 PF00571 CBS domain E3160_17855 PF05170 AsmA family E3160_17860 PF00692 dUTPase E3160_17865 PF00485 Phosphoribulokinase / Uridine kinase family E3160_17875 PF06029 AlkA N-terminal domain E3160_17875 PF00730 HhH-GPD superfamily base excision DNA repair protein E3160_17880 PF00012 Hsp70 protein E3160_17895 PF00092 von Willebrand factor type A domain E3160_17915 PF13533 Biotin-lipoyl like E3160_17920 PF00873 AcrB/AcrD/AcrF family E3160_17925 PF00873 AcrB/AcrD/AcrF family E3160_17930 PF07690 Major Facilitator Superfamily E3160_17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_17935 PF00672 HAMP domain E3160_17935 PF00512 His Kinase A (phospho-acceptor) domain E3160_17940 PF00072 Response regulator receiver domain E3160_17940 PF00486 Transcriptional regulatory protein, C terminal E3160_17945 PF07411 Domain of unknown function (DUF1508) E3160_17965 PF00781 Diacylglycerol kinase catalytic domain E3160_17970 PF08220 DeoR-like helix-turn-helix domain E3160_17975 PF00107 Zinc-binding dehydrogenase E3160_17975 PF08240 Alcohol dehydrogenase GroES-like domain E3160_17980 PF03611 PTS system sugar-specific permease component E3160_17985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_17990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_17995 PF08013 Tagatose 6 phosphate kinase E3160_18000 PF01116 Fructose-bisphosphate aldolase class-II E3160_18005 PF01791 DeoC/LacD family aldolase E3160_18010 PF03825 Nucleoside H+ symporter E3160_18015 PF03747 ADP-ribosylglycohydrolase E3160_18020 PF00294 pfkB family carbohydrate kinase E3160_18025 PF00392 Bacterial regulatory proteins, gntR family E3160_18025 PF07702 UTRA domain E3160_18030 PF01183 Glycosyl hydrolases family 25 E3160_18035 PF08543 Phosphomethylpyrimidine kinase E3160_18040 PF02110 Hydroxyethylthiazole kinase family E3160_18065 PF02583 Metal-sensitive transcriptional repressor E3160_18070 PF03824 High-affinity nickel-transport protein E3160_18075 PF11776 Nickel/cobalt transporter regulator E3160_18080 PF00419 Fimbrial protein E3160_18085 PF13953 PapC C-terminal domain E3160_18085 PF13954 PapC N-terminal domain E3160_18085 PF00577 Outer membrane usher protein E3160_18090 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_18090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_18095 PF00419 Fimbrial protein E3160_18100 PF10836 Protein of unknown function (DUF2574) E3160_18105 PF10609 NUBPL iron-transfer P-loop NTPase E3160_18110 PF01588 Putative tRNA binding domain E3160_18110 PF09334 tRNA synthetases class I (M) E3160_18130 PF13569 Domain of unknown function (DUF4132) E3160_18135 PF13569 Domain of unknown function (DUF4132) E3160_18140 PF13569 Domain of unknown function (DUF4132) E3160_18150 PF07728 AAA domain (dynein-related subfamily) E3160_18165 PF05762 VWA domain containing CoxE-like protein E3160_18170 PF04434 SWIM zinc finger E3160_18175 PF06998 Protein of unknown function (DUF1307) E3160_18180 PF07308 Protein of unknown function (DUF1456) E3160_18185 PF00072 Response regulator receiver domain E3160_18185 PF04397 LytTr DNA-binding domain E3160_18190 PF07694 5TMR of 5TMR-LYT E3160_18190 PF06580 Histidine kinase E3160_18230 PF07484 Phage Tail Collar Domain E3160_18230 PF08400 Prophage tail fibre N-terminal E3160_18230 PF03335 Phage tail fibre repeat E3160_18235 PF06316 Enterobacterial Ail/Lom protein E3160_18250 PF05717 IS66 Orf2 like protein E3160_18255 PF13005 zinc-finger binding domain of transposase IS66 E3160_18255 PF13817 IS66 C-terminal element E3160_18255 PF03050 Transposase IS66 family E3160_18255 PF13007 Transposase C of IS166 homeodomain E3160_18355 PF13132 Domain of unknown function (DUF3950) E3160_18370 PF03245 Bacteriophage Rz lysis protein E3160_18375 PF00959 Phage lysozyme E3160_18380 PF04971 Bacteriophage P21 holin S E3160_18395 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase E3160_18405 PF02258 Shiga-like toxin beta subunit E3160_18410 PF00161 Ribosome inactivating protein E3160_18430 PF01555 DNA methylase E3160_18455 PF06147 Protein of unknown function (DUF968) E3160_18465 PF05866 Endodeoxyribonuclease RusA E3160_18470 PF00717 Peptidase S24-like E3160_18470 PF01726 LexA DNA binding domain E3160_18475 PF05869 DNA N-6-adenine-methyltransferase (Dam) E3160_18480 PF06069 PerC transcriptional activator E3160_18495 PF09669 Phage regulatory protein Rha (Phage_pRha) E3160_18495 PF10549 ORF11CD3 domain E3160_18530 PF10065 Uncharacterized conserved protein (DUF2303) E3160_18565 PF12167 Arm DNA-binding domain E3160_18565 PF00589 Phage integrase family E3160_18570 PF13411 MerR HTH family regulatory protein E3160_18580 PF00528 Binding-protein-dependent transport system inner membrane component E3160_18585 PF00005 ABC transporter E3160_18590 PF00528 Binding-protein-dependent transport system inner membrane component E3160_18595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3160_18600 PF00933 Glycosyl hydrolase family 3 N terminal domain E3160_18600 PF01915 Glycosyl hydrolase family 3 C-terminal domain E3160_18600 PF14310 Fibronectin type III-like domain E3160_18605 PF09330 D-lactate dehydrogenase, membrane binding E3160_18605 PF01565 FAD binding domain E3160_18610 PF00768 D-alanyl-D-alanine carboxypeptidase E3160_18615 PF04893 Yip1 domain E3160_18620 PF09335 SNARE associated Golgi protein E3160_18630 PF02321 Outer membrane efflux protein E3160_18640 PF01207 Dihydrouridine synthase (Dus) E3160_18645 PF01494 FAD binding domain E3160_18650 PF02798 Glutathione S-transferase, N-terminal domain E3160_18650 PF14497 Glutathione S-transferase, C-terminal domain E3160_18655 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3160_18660 PF07883 Cupin domain E3160_18665 PF07690 Major Facilitator Superfamily E3160_18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_18670 PF03466 LysR substrate binding domain E3160_18675 PF03788 LrgA family E3160_18680 PF04172 LrgB-like family E3160_18685 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region E3160_18685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E3160_18690 PF02698 DUF218 domain E3160_18695 PF10808 Protein of unknown function (DUF2542) E3160_18700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3160_18700 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_18705 PF01180 Dihydroorotate dehydrogenase E3160_18710 PF02653 Branched-chain amino acid transport system / permease component E3160_18715 PF00005 ABC transporter E3160_18720 PF13407 Periplasmic binding protein domain E3160_18725 PF00356 Bacterial regulatory proteins, lacI family E3160_18730 PF04235 Protein of unknown function (DUF418) E3160_18735 PF01227 GTP cyclohydrolase I E3160_18740 PF00756 Putative esterase E3160_18745 PF00593 TonB dependent receptor E3160_18745 PF07715 TonB-dependent Receptor Plug Domain E3160_18755 PF00324 Amino acid permease E3160_18760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_18760 PF03466 LysR substrate binding domain E3160_18765 PF03601 Conserved hypothetical protein 698 E3160_18770 PF01261 Xylose isomerase-like TIM barrel E3160_18775 PF00294 pfkB family carbohydrate kinase E3160_18780 PF07662 Na+ dependent nucleoside transporter C-terminus E3160_18780 PF01773 Na+ dependent nucleoside transporter N-terminus E3160_18785 PF01156 Inosine-uridine preferring nucleoside hydrolase E3160_18790 PF00027 Cyclic nucleotide-binding domain E3160_18795 PF01773 Na+ dependent nucleoside transporter N-terminus E3160_18795 PF07662 Na+ dependent nucleoside transporter C-terminus E3160_18800 PF04227 Indigoidine synthase A like protein E3160_18805 PF00294 pfkB family carbohydrate kinase E3160_18810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_18810 PF02378 Phosphotransferase system, EIIC E3160_18815 PF00294 pfkB family carbohydrate kinase E3160_18820 PF00381 PTS HPr component phosphorylation site E3160_18820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_18825 PF07690 Major Facilitator Superfamily E3160_18830 PF03692 Putative zinc- or iron-chelating domain E3160_18835 PF09285 Elongation factor P, C-terminal E3160_18835 PF08207 Elongation factor P (EF-P) KOW-like domain E3160_18835 PF01132 Elongation factor P (EF-P) OB domain E3160_18840 PF08125 Mannitol dehydrogenase C-terminal domain E3160_18840 PF01232 Mannitol dehydrogenase Rossmann domain E3160_18845 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3160_18845 PF07683 Cobalamin synthesis protein cobW C-terminal domain E3160_18850 PF01569 PAP2 superfamily E3160_18855 PF00877 NlpC/P60 family E3160_18865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_18870 PF00528 Binding-protein-dependent transport system inner membrane component E3160_18875 PF00528 Binding-protein-dependent transport system inner membrane component E3160_18875 PF12911 N-terminal TM domain of oligopeptide transport permease C E3160_18880 PF00005 ABC transporter E3160_18880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_18885 PF13989 YejG-like protein E3160_18890 PF07690 Major Facilitator Superfamily E3160_18895 PF00849 RNA pseudouridylate synthase E3160_18895 PF01479 S4 domain E3160_18900 PF00271 Helicase conserved C-terminal domain E3160_18900 PF04851 Type III restriction enzyme, res subunit E3160_18905 PF01386 Ribosomal L25p family E3160_18910 PF04245 37-kD nucleoid-associated bacterial protein E3160_18915 PF07208 Protein of unknown function (DUF1414) E3160_18920 PF00884 Sulfatase E3160_18920 PF11893 Domain of unknown function (DUF3413) E3160_18930 PF16168 Adhesin of bacterial autotransporter system, probable stalk E3160_18930 PF03797 Autotransporter beta-domain E3160_18930 PF03212 Pertactin E3160_18935 PF00196 Bacterial regulatory proteins, luxR family E3160_18935 PF00072 Response regulator receiver domain E3160_18940 PF03918 Cytochrome C biogenesis protein E3160_18945 PF08534 Redoxin E3160_18950 PF01578 Cytochrome C assembly protein E3160_18950 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E3160_18955 PF03100 CcmE E3160_18960 PF04995 Heme exporter protein D (CcmD) E3160_18965 PF01578 Cytochrome C assembly protein E3160_18970 PF03379 CcmB protein E3160_18975 PF00005 ABC transporter E3160_18980 PF03264 NapC/NirT cytochrome c family, N-terminal region E3160_18985 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E3160_18990 PF12801 4Fe-4S binding domain E3160_18990 PF13237 4Fe-4S dicluster domain E3160_18995 PF12800 4Fe-4S binding domain E3160_18995 PF12838 4Fe-4S dicluster domain E3160_19000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_19000 PF00384 Molybdopterin oxidoreductase E3160_19000 PF01568 Molydopterin dinucleotide binding domain E3160_19005 PF03927 NapD protein E3160_19010 PF13187 4Fe-4S dicluster domain E3160_19010 PF12800 4Fe-4S binding domain E3160_19010 PF00037 4Fe-4S binding domain E3160_19015 PF03974 Ecotin E3160_19020 PF06039 Malate:quinone oxidoreductase (Mqo) E3160_19025 PF00005 ABC transporter E3160_19030 PF13532 2OG-Fe(II) oxygenase superfamily E3160_19035 PF02805 Metal binding domain of Ada E3160_19035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3160_19035 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E3160_19035 PF12833 Helix-turn-helix domain E3160_19040 PF02424 ApbE family E3160_19045 PF00267 Gram-negative porin E3160_19050 PF16359 RcsD-ABL domain E3160_19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_19050 PF01627 Hpt domain E3160_19055 PF00196 Bacterial regulatory proteins, luxR family E3160_19055 PF00072 Response regulator receiver domain E3160_19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_19060 PF00072 Response regulator receiver domain E3160_19060 PF09456 RcsC Alpha-Beta-Loop (ABL) E3160_19060 PF00512 His Kinase A (phospho-acceptor) domain E3160_19065 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) E3160_19075 PF07703 Alpha-2-macroglobulin bait region domain E3160_19075 PF01835 MG2 domain E3160_19075 PF00207 Alpha-2-macroglobulin family E3160_19080 PF06672 Protein of unknown function (DUF1175) E3160_19085 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) E3160_19090 PF00521 DNA gyrase/topoisomerase IV, subunit A E3160_19090 PF03989 DNA gyrase C-terminal domain, beta-propeller E3160_19100 PF03797 Autotransporter beta-domain E3160_19100 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat E3160_19100 PF12951 Passenger-associated-transport-repeat E3160_19105 PF02867 Ribonucleotide reductase, barrel domain E3160_19105 PF00317 Ribonucleotide reductase, all-alpha domain E3160_19105 PF03477 ATP cone domain E3160_19110 PF00268 Ribonucleotide reductase, small chain E3160_19115 PF00111 2Fe-2S iron-sulfur cluster binding domain E3160_19125 PF07690 Major Facilitator Superfamily E3160_19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_19130 PF03466 LysR substrate binding domain E3160_19140 PF03009 Glycerophosphoryl diester phosphodiesterase family E3160_19145 PF07690 Major Facilitator Superfamily E3160_19150 PF01266 FAD dependent oxidoreductase E3160_19150 PF04324 BFD-like [2Fe-2S] binding domain E3160_19155 PF00890 FAD binding domain E3160_19160 PF02754 Cysteine-rich domain E3160_19160 PF13183 4Fe-4S dicluster domain E3160_19165 PF04754 Putative transposase, YhgA-like E3160_19170 PF03328 HpcH/HpaI aldolase/citrate lyase family E3160_19175 PF07690 Major Facilitator Superfamily E3160_19180 PF13378 Enolase C-terminal domain-like E3160_19180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3160_19185 PF09339 IclR helix-turn-helix domain E3160_19185 PF01614 Bacterial transcriptional regulator E3160_19190 PF00994 Probable molybdopterin binding domain E3160_19195 PF07437 YfaZ precursor E3160_19200 PF00293 NUDIX domain E3160_19205 PF00300 Histidine phosphatase superfamily (branch 1) E3160_19210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3160_19215 PF00535 Glycosyl transferase family 2 E3160_19220 PF01370 NAD dependent epimerase/dehydratase family E3160_19220 PF02911 Formyl transferase, C-terminal domain E3160_19220 PF00551 Formyl transferase E3160_19225 PF01522 Polysaccharide deacetylase E3160_19230 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E3160_19235 PF00892 EamA-like transporter family E3160_19250 PF13193 AMP-binding enzyme C-terminal domain E3160_19250 PF00501 AMP-binding enzyme E3160_19255 PF13378 Enolase C-terminal domain-like E3160_19260 PF00378 Enoyl-CoA hydratase/isomerase E3160_19265 PF12697 Alpha/beta hydrolase family E3160_19270 PF16582 Middle domain of thiamine pyrophosphate E3160_19270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3160_19270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_19275 PF00425 chorismate binding enzyme E3160_19280 PF05957 Bacterial protein of unknown function (DUF883) E3160_19285 PF13673 Acetyltransferase (GNAT) domain E3160_19290 PF12706 Beta-lactamase superfamily domain E3160_19295 PF02902 Ulp1 protease family, C-terminal catalytic domain E3160_19305 PF08974 Domain of unknown function (DUF1877) E3160_19310 PF00361 Proton-conducting membrane transporter E3160_19315 PF00361 Proton-conducting membrane transporter E3160_19320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E3160_19320 PF00361 Proton-conducting membrane transporter E3160_19325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E3160_19330 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E3160_19335 PF12838 4Fe-4S dicluster domain E3160_19340 PF00146 NADH dehydrogenase E3160_19345 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E3160_19345 PF00384 Molybdopterin oxidoreductase E3160_19345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_19345 PF01568 Molydopterin dinucleotide binding domain E3160_19350 PF10531 SLBB domain E3160_19350 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E3160_19350 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E3160_19360 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E3160_19360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E3160_19365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3160_19370 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E3160_19375 PF03466 LysR substrate binding domain E3160_19375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_19380 PF00155 Aminotransferase class I and II E3160_19390 PF02080 TrkA-C domain E3160_19390 PF03600 Citrate transporter E3160_19395 PF13419 Haloacid dehalogenase-like hydrolase E3160_19400 PF03887 YfbU domain E3160_19405 PF04217 Protein of unknown function, DUF412 E3160_19410 PF00871 Acetokinase family E3160_19415 PF07085 DRTGG domain E3160_19415 PF01515 Phosphate acetyl/butaryl transferase E3160_19420 PF03606 C4-dicarboxylate anaerobic carrier E3160_19425 PF00293 NUDIX domain E3160_19430 PF12850 Calcineurin-like phosphoesterase superfamily domain E3160_19450 PF02798 Glutathione S-transferase, N-terminal domain E3160_19450 PF00043 Glutathione S-transferase, C-terminal domain E3160_19455 PF02152 Dihydroneopterin aldolase E3160_19460 PF08338 Domain of unknown function (DUF1731) E3160_19460 PF01370 NAD dependent epimerase/dehydratase family E3160_19465 PF04754 Putative transposase, YhgA-like E3160_19470 PF00005 ABC transporter E3160_19475 PF00528 Binding-protein-dependent transport system inner membrane component E3160_19480 PF00528 Binding-protein-dependent transport system inner membrane component E3160_19485 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_19490 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_19495 PF02441 Flavoprotein E3160_19500 PF00156 Phosphoribosyl transferase domain E3160_19505 PF02674 Colicin V production protein E3160_19510 PF05036 Sporulation related domain E3160_19515 PF08245 Mur ligase middle domain E3160_19515 PF02875 Mur ligase family, glutamate ligase domain E3160_19520 PF01039 Carboxyl transferase domain E3160_19520 PF17848 Acetyl-coA carboxylase zinc finger domain E3160_19525 PF09335 SNARE associated Golgi protein E3160_19530 PF01416 tRNA pseudouridine synthase E3160_19535 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3160_19535 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3160_19540 PF11890 Domain of unknown function (DUF3410) E3160_19540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3160_19540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3160_19550 PF07690 Major Facilitator Superfamily E3160_19555 PF00109 Beta-ketoacyl synthase, N-terminal domain E3160_19555 PF02801 Beta-ketoacyl synthase, C-terminal domain E3160_19560 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E3160_19560 PF01266 FAD dependent oxidoreductase E3160_19565 PF08891 YfcL protein E3160_19570 PF04315 Elongation factor P hydroxylase E3160_19575 PF01925 Sulfite exporter TauE/SafE E3160_19580 PF03411 Penicillin-insensitive murein endopeptidase E3160_19585 PF01264 Chorismate synthase E3160_19590 PF05175 Methyltransferase small domain E3160_19595 PF01713 Smr domain E3160_19600 PF11245 Protein of unknown function (DUF2544) E3160_19605 PF00419 Fimbrial protein E3160_19610 PF00419 Fimbrial protein E3160_19615 PF00419 Fimbrial protein E3160_19620 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_19620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_19625 PF00577 Outer membrane usher protein E3160_19625 PF13953 PapC C-terminal domain E3160_19625 PF13954 PapC N-terminal domain E3160_19630 PF00419 Fimbrial protein E3160_19635 PF00300 Histidine phosphatase superfamily (branch 1) E3160_19640 PF00378 Enoyl-CoA hydratase/isomerase E3160_19640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E3160_19640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E3160_19645 PF02803 Thiolase, C-terminal domain E3160_19645 PF00108 Thiolase, N-terminal domain E3160_19650 PF04175 Protein of unknown function (DUF406) E3160_19655 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E3160_19670 PF04333 MlaA lipoprotein E3160_19675 PF01226 Formate/nitrite transporter E3160_19685 PF00589 Phage integrase family E3160_19685 PF14659 Phage integrase, N-terminal SAM-like domain E3160_19685 PF13356 Arm DNA-binding domain E3160_19730 PF02796 Helix-turn-helix domain of resolvase E3160_19730 PF00239 Resolvase, N terminal domain E3160_19735 PF01306 LacY proton/sugar symporter E3160_19740 PF00294 pfkB family carbohydrate kinase E3160_19745 PF00251 Glycosyl hydrolases family 32 N-terminal domain E3160_19745 PF08244 Glycosyl hydrolases family 32 C terminal E3160_19750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3160_19750 PF00356 Bacterial regulatory proteins, lacI family E3160_19760 PF00291 Pyridoxal-phosphate dependent enzyme E3160_19765 PF07690 Major Facilitator Superfamily E3160_19770 PF00529 HlyD membrane-fusion protein of T1SS E3160_19770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_19775 PF00196 Bacterial regulatory proteins, luxR family E3160_19775 PF00072 Response regulator receiver domain E3160_19780 PF00512 His Kinase A (phospho-acceptor) domain E3160_19780 PF00072 Response regulator receiver domain E3160_19780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_19780 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_19785 PF02515 CoA-transferase family III E3160_19795 PF05717 IS66 Orf2 like protein E3160_19800 PF03050 Transposase IS66 family E3160_19800 PF13817 IS66 C-terminal element E3160_19800 PF13007 Transposase C of IS166 homeodomain E3160_19800 PF13005 zinc-finger binding domain of transposase IS66 E3160_19805 PF02515 CoA-transferase family III E3160_19810 PF03547 Membrane transport protein E3160_19815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3160_19815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_19815 PF00205 Thiamine pyrophosphate enzyme, central domain E3160_19820 PF02515 CoA-transferase family III E3160_19825 PF10938 YfdX protein E3160_19835 PF10810 Protein of unknown function (DUF2545) E3160_19840 PF03279 Bacterial lipid A biosynthesis acyltransferase E3160_19850 PF00155 Aminotransferase class I and II E3160_19860 PF04397 LytTr DNA-binding domain E3160_19860 PF00072 Response regulator receiver domain E3160_19865 PF12833 Helix-turn-helix domain E3160_19870 PF05524 PEP-utilising enzyme, N-terminal E3160_19870 PF00391 PEP-utilising enzyme, mobile domain E3160_19870 PF02896 PEP-utilising enzyme, TIM barrel domain E3160_19870 PF00381 PTS HPr component phosphorylation site E3160_19870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_19875 PF05343 M42 glutamyl aminopeptidase E3160_19880 PF00557 Metallopeptidase family M24 E3160_19880 PF01321 Creatinase/Prolidase N-terminal domain E3160_19885 PF02378 Phosphotransferase system, EIIC E3160_19890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_19895 PF02685 Glucokinase E3160_19900 PF00654 Voltage gated chloride channel E3160_19905 PF10697 Protein of unknown function (DUF2502) E3160_19910 PF01566 Natural resistance-associated macrophage protein E3160_19915 PF01773 Na+ dependent nucleoside transporter N-terminus E3160_19915 PF07662 Na+ dependent nucleoside transporter C-terminus E3160_19915 PF07670 Nucleoside recognition E3160_19920 PF05231 MASE1 E3160_19920 PF00563 EAL domain E3160_19935 PF07037 Putative transcription regulator (DUF1323) E3160_19940 PF07037 Putative transcription regulator (DUF1323) E3160_19945 PF12323 Helix-turn-helix domain E3160_19945 PF07282 Putative transposase DNA-binding domain E3160_19945 PF01385 Probable transposase E3160_19955 PF00749 tRNA synthetases class I (E and Q), catalytic domain E3160_19985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_19985 PF03466 LysR substrate binding domain E3160_19990 PF13593 SBF-like CPA transporter family (DUF4137) E3160_19995 PF12843 Putative quorum-sensing-regulated virulence factor E3160_20000 PF01653 NAD-dependent DNA ligase adenylation domain E3160_20000 PF12826 Helix-hairpin-helix motif E3160_20000 PF00533 BRCA1 C Terminus (BRCT) domain E3160_20000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E3160_20000 PF03120 NAD-dependent DNA ligase OB-fold domain E3160_20005 PF04354 ZipA, C-terminal FtsZ-binding domain E3160_20015 PF00291 Pyridoxal-phosphate dependent enzyme E3160_20020 PF00381 PTS HPr component phosphorylation site E3160_20025 PF02896 PEP-utilising enzyme, TIM barrel domain E3160_20025 PF05524 PEP-utilising enzyme, N-terminal E3160_20025 PF00391 PEP-utilising enzyme, mobile domain E3160_20030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E3160_20035 PF08543 Phosphomethylpyrimidine kinase E3160_20045 PF00291 Pyridoxal-phosphate dependent enzyme E3160_20050 PF00005 ABC transporter E3160_20055 PF00528 Binding-protein-dependent transport system inner membrane component E3160_20060 PF00528 Binding-protein-dependent transport system inner membrane component E3160_20075 PF01380 SIS domain E3160_20075 PF01418 Helix-turn-helix domain, rpiR family E3160_20080 PF01380 SIS domain E3160_20085 PF02378 Phosphotransferase system, EIIC E3160_20085 PF00367 phosphotransferase system, EIIB E3160_20090 PF00144 Beta-lactamase E3160_20095 PF04261 Dyp-type peroxidase family E3160_20100 PF06572 Protein of unknown function (DUF1131) E3160_20105 PF11143 Protein of unknown function (DUF2919) E3160_20110 PF00583 Acetyltransferase (GNAT) family E3160_20115 PF01520 N-acetylmuramoyl-L-alanine amidase E3160_20120 PF01218 Coproporphyrinogen III oxidase E3160_20125 PF12833 Helix-turn-helix domain E3160_20130 PF16365 Ethanolamine utilization protein EutK C-terminus E3160_20130 PF00936 BMC domain E3160_20135 PF00936 BMC domain E3160_20140 PF05985 Ethanolamine ammonia-lyase light chain (EutC) E3160_20145 PF06751 Ethanolamine ammonia lyase large subunit (EutB) E3160_20150 PF00589 Phage integrase family E3160_20150 PF13356 Arm DNA-binding domain E3160_20220 PF06277 Ethanolamine utilisation protein EutA E3160_20225 PF04346 Ethanolamine utilisation protein, EutH E3160_20230 PF00465 Iron-containing alcohol dehydrogenase E3160_20240 PF00171 Aldehyde dehydrogenase family E3160_20245 PF03319 Ethanolamine utilisation protein EutN/carboxysome E3160_20250 PF00936 BMC domain E3160_20255 PF01515 Phosphate acetyl/butaryl transferase E3160_20260 PF01923 Cobalamin adenosyltransferase E3160_20270 PF10662 Ethanolamine utilisation - propanediol utilisation E3160_20275 PF00936 BMC domain E3160_20280 PF00390 Malic enzyme, N-terminal domain E3160_20280 PF01515 Phosphate acetyl/butaryl transferase E3160_20280 PF03949 Malic enzyme, NAD binding domain E3160_20285 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3160_20290 PF00456 Transketolase, thiamine diphosphate binding domain E3160_20290 PF02780 Transketolase, C-terminal domain E3160_20290 PF02779 Transketolase, pyrimidine binding domain E3160_20295 PF06674 Protein of unknown function (DUF1176) E3160_20300 PF00293 NUDIX domain E3160_20305 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_20305 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3160_20305 PF13247 4Fe-4S dicluster domain E3160_20310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_20310 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E3160_20310 PF07730 Histidine kinase E3160_20310 PF00672 HAMP domain E3160_20315 PF00873 AcrB/AcrD/AcrF family E3160_20330 PF03960 ArsC family E3160_20335 PF07687 Peptidase dimerisation domain E3160_20335 PF01546 Peptidase family M20/M25/M40 E3160_20340 PF13980 Uncharacterised protein family (UPF0370) E3160_20345 PF02230 Phospholipase/Carboxylesterase E3160_20350 PF17176 tRNA-binding domain E3160_20350 PF08351 Domain of unknown function (DUF1726) E3160_20350 PF13718 GNAT acetyltransferase 2 E3160_20350 PF05127 Helicase E3160_20355 PF04228 Putative neutral zinc metallopeptidase E3160_20360 PF01259 SAICAR synthetase E3160_20365 PF06804 NlpB/DapX lipoprotein E3160_20370 PF00701 Dihydrodipicolinate synthetase family E3160_20375 PF01842 ACT domain E3160_20380 PF00578 AhpC/TSA family E3160_20385 PF00037 4Fe-4S binding domain E3160_20385 PF12798 4Fe-4S binding domain E3160_20390 PF00361 Proton-conducting membrane transporter E3160_20395 PF00146 NADH dehydrogenase E3160_20400 PF00361 Proton-conducting membrane transporter E3160_20400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E3160_20405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E3160_20410 PF00361 Proton-conducting membrane transporter E3160_20410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E3160_20415 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E3160_20415 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E3160_20415 PF00374 Nickel-dependent hydrogenase E3160_20420 PF12838 4Fe-4S dicluster domain E3160_20425 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3160_20430 PF07450 Formate hydrogenlyase maturation protein HycH E3160_20435 PF01590 GAF domain E3160_20435 PF00158 Sigma-54 interaction domain E3160_20440 PF01226 Formate/nitrite transporter E3160_20445 PF01594 AI-2E family transporter E3160_20450 PF01435 Peptidase family M48 E3160_20455 PF03960 ArsC family E3160_20460 PF00308 Bacterial dnaA protein E3160_20465 PF00860 Permease family E3160_20475 PF00586 AIR synthase related protein, N-terminal domain E3160_20475 PF02769 AIR synthase related protein, C-terminal domain E3160_20480 PF00551 Formyl transferase E3160_20485 PF17941 Polyphosphate kinase C-terminal domain 1 E3160_20485 PF13090 Polyphosphate kinase C-terminal domain 2 E3160_20485 PF13089 Polyphosphate kinase N-terminal domain E3160_20485 PF02503 Polyphosphate kinase middle domain E3160_20490 PF02541 Ppx/GppA phosphatase family E3160_20495 PF05231 MASE1 E3160_20495 PF00563 EAL domain E3160_20500 PF11119 Protein of unknown function (DUF2633) E3160_20505 PF05433 Glycine zipper 2TM domain E3160_20510 PF17358 Family of unknown function (DUF5384) E3160_20515 PF00958 GMP synthase C terminal domain E3160_20515 PF00117 Glutamine amidotransferase class-I E3160_20515 PF02540 NAD synthase E3160_20520 PF00571 CBS domain E3160_20520 PF00478 IMP dehydrogenase / GMP reductase domain E3160_20525 PF02601 Exonuclease VII, large subunit E3160_20525 PF13742 OB-fold nucleic acid binding domain E3160_20530 PF07191 zinc-ribbons E3160_20535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E3160_20535 PF01926 50S ribosome-binding GTPase E3160_20540 PF13360 PQQ-like domain E3160_20545 PF09976 Tetratricopeptide repeat-like domain E3160_20550 PF03129 Anticodon binding domain E3160_20550 PF13393 Histidyl-tRNA synthetase E3160_20555 PF04551 GcpE protein E3160_20560 PF13464 Domain of unknown function (DUF4115) E3160_20565 PF04055 Radical SAM superfamily E3160_20570 PF00334 Nucleoside diphosphate kinase E3160_20580 PF04976 DMSO reductase anchor subunit (DmsC) E3160_20585 PF13247 4Fe-4S dicluster domain E3160_20585 PF12800 4Fe-4S binding domain E3160_20590 PF01568 Molydopterin dinucleotide binding domain E3160_20590 PF00384 Molybdopterin oxidoreductase E3160_20590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3160_20595 PF00912 Transglycosylase E3160_20595 PF00905 Penicillin binding protein transpeptidase domain E3160_20595 PF06832 Penicillin-Binding Protein C-terminus Family E3160_20600 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain E3160_20600 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E3160_20600 PF07678 A-macroglobulin TED domain E3160_20600 PF01835 MG2 domain E3160_20600 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E3160_20600 PF00207 Alpha-2-macroglobulin family E3160_20600 PF17962 Bacterial macroglobulin domain 6 E3160_20600 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E3160_20600 PF07703 Alpha-2-macroglobulin bait region domain E3160_20605 PF00581 Rhodanese-like domain E3160_20610 PF14581 SseB protein C-terminal domain E3160_20610 PF07179 SseB protein N-terminal domain E3160_20615 PF12404 Peptidase E3160_20615 PF00883 Cytosol aminopeptidase family, catalytic domain E3160_20620 PF04384 Iron-sulphur cluster assembly E3160_20625 PF00111 2Fe-2S iron-sulfur cluster binding domain E3160_20630 PF00012 Hsp70 protein E3160_20635 PF07743 HSCB C-terminal oligomerisation domain E3160_20640 PF01521 Iron-sulphur cluster biosynthesis E3160_20645 PF01592 NifU-like N terminal domain E3160_20650 PF00266 Aminotransferase class-V E3160_20655 PF02082 Transcriptional regulator E3160_20660 PF00588 SpoU rRNA Methylase family E3160_20665 PF00459 Inositol monophosphatase family E3160_20670 PF12146 Serine aminopeptidase, S33 E3160_20675 PF00874 PRD domain E3160_20680 PF12832 MFS_1 like family E3160_20685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_20685 PF03466 LysR substrate binding domain E3160_20690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) E3160_20690 PF00355 Rieske [2Fe-2S] domain E3160_20695 PF00866 Ring hydroxylating beta subunit E3160_20700 PF00355 Rieske [2Fe-2S] domain E3160_20705 PF00106 short chain dehydrogenase E3160_20710 PF14759 Reductase C-terminal E3160_20710 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_20715 PF07681 DoxX E3160_20720 PF01263 Aldose 1-epimerase E3160_20725 PF08240 Alcohol dehydrogenase GroES-like domain E3160_20725 PF00107 Zinc-binding dehydrogenase E3160_20730 PF02653 Branched-chain amino acid transport system / permease component E3160_20735 PF00005 ABC transporter E3160_20740 PF13407 Periplasmic binding protein domain E3160_20745 PF13181 Tetratricopeptide repeat E3160_20745 PF17128 Domain of unknown function (DUF5107) E3160_20750 PF00480 ROK family E3160_20755 PF00464 Serine hydroxymethyltransferase E3160_20760 PF00970 Oxidoreductase FAD-binding domain E3160_20760 PF00042 Globin E3160_20760 PF00175 Oxidoreductase NAD-binding domain E3160_20765 PF00543 Nitrogen regulatory protein P-II E3160_20770 PF00072 Response regulator receiver domain E3160_20770 PF00158 Sigma-54 interaction domain E3160_20775 PF13942 YfhG lipoprotein E3160_20780 PF00512 His Kinase A (phospho-acceptor) domain E3160_20780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_20785 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E3160_20785 PF02769 AIR synthase related protein, C-terminal domain E3160_20785 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E3160_20790 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_20790 PF01464 Transglycosylase SLT domain E3160_20795 PF14437 MafB19-like deaminase E3160_20805 PF01418 Helix-turn-helix domain, rpiR family E3160_20805 PF01380 SIS domain E3160_20810 PF12838 4Fe-4S dicluster domain E3160_20820 PF01648 4'-phosphopantetheinyl transferase superfamily E3160_20825 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E3160_20830 PF02565 Recombination protein O C terminal E3160_20830 PF11967 Recombination protein O N terminal E3160_20835 PF01926 50S ribosome-binding GTPase E3160_20835 PF07650 KH domain E3160_20840 PF14622 Ribonuclease-III-like E3160_20840 PF00035 Double-stranded RNA binding motif E3160_20845 PF10502 Signal peptidase, peptidase S26 E3160_20850 PF00009 Elongation factor Tu GTP binding domain E3160_20850 PF06421 GTP-binding protein LepA C-terminus E3160_20850 PF03144 Elongation factor Tu domain 2 E3160_20850 PF00679 Elongation factor G C-terminus E3160_20860 PF17188 MucB/RseB C-terminal domain E3160_20860 PF03888 MucB/RseB N-terminal domain E3160_20865 PF03872 Anti sigma-E protein RseA, N-terminal domain E3160_20865 PF03873 Anti sigma-E protein RseA, C-terminal domain E3160_20870 PF04542 Sigma-70 region 2 E3160_20870 PF08281 Sigma-70, region 4 E3160_20880 PF00890 FAD binding domain E3160_20880 PF02910 Fumarate reductase flavoprotein C-term E3160_20885 PF05175 Methyltransferase small domain E3160_20890 PF00270 DEAD/DEAH box helicase E3160_20890 PF00271 Helicase conserved C-terminal domain E3160_20895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_20895 PF03466 LysR substrate binding domain E3160_20900 PF01810 LysE type translocator E3160_20905 PF01228 Glycine radical E3160_20910 PF03167 Uracil DNA glycosylase superfamily E3160_20915 PF08032 RNA 2'-O ribose methyltransferase substrate binding E3160_20915 PF00588 SpoU rRNA Methylase family E3160_20920 PF00085 Thioredoxin E3160_20930 PF13607 Succinyl-CoA ligase like flavodoxin domain E3160_20930 PF13380 CoA binding domain E3160_20930 PF00583 Acetyltransferase (GNAT) family E3160_20935 PF13091 PLD-like domain E3160_20940 PF10043 Predicted periplasmic lipoprotein (DUF2279) E3160_20945 PF00083 Sugar (and other) transporter E3160_20970 PF10431 C-terminal, D2-small domain, of ClpB protein E3160_20970 PF02861 Clp amino terminal domain, pathogenicity island component E3160_20970 PF17871 AAA lid domain E3160_20970 PF00004 ATPase family associated with various cellular activities (AAA) E3160_20970 PF07724 AAA domain (Cdc48 subfamily) E3160_20980 PF00849 RNA pseudouridylate synthase E3160_20980 PF01479 S4 domain E3160_20985 PF13525 Outer membrane lipoprotein E3160_20990 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E3160_21000 PF01817 Chorismate mutase type II E3160_21000 PF00800 Prephenate dehydratase E3160_21005 PF01817 Chorismate mutase type II E3160_21005 PF02153 Prephenate dehydrogenase E3160_21010 PF00793 DAHP synthetase I family E3160_21015 PF10973 Protein of unknown function (DUF2799) E3160_21020 PF13689 YfiR/HmsC-like E3160_21025 PF17152 Periplasmic sensor domain E3160_21025 PF00990 Diguanylate cyclase, GGDEF domain E3160_21030 PF00691 OmpA family E3160_21035 PF01245 Ribosomal protein L19 E3160_21040 PF01746 tRNA (Guanine-1)-methyltransferase E3160_21045 PF05239 PRC-barrel domain E3160_21045 PF01782 RimM N-terminal domain E3160_21050 PF00886 Ribosomal protein S16 E3160_21055 PF02978 Signal peptide binding domain E3160_21055 PF00448 SRP54-type protein, GTPase domain E3160_21055 PF02881 SRP54-type protein, helical bundle domain E3160_21060 PF01578 Cytochrome C assembly protein E3160_21065 PF00571 CBS domain E3160_21065 PF03471 Transporter associated domain E3160_21065 PF01595 Cyclin M transmembrane N-terminal domain E3160_21070 PF01025 GrpE E3160_21080 PF01513 ATP-NAD kinase E3160_21085 PF02463 RecF/RecN/SMC N terminal domain E3160_21090 PF04355 SmpA / OmlA family E3160_21095 PF03658 RnfH family Ubiquitin E3160_21100 PF03364 Polyketide cyclase / dehydrase and lipid transport E3160_21105 PF01668 SmpB protein E3160_21115 PF06183 DinI-like family E3160_21125 PF03692 Putative zinc- or iron-chelating domain E3160_21160 PF06316 Enterobacterial Ail/Lom protein E3160_21280 PF13132 Domain of unknown function (DUF3950) E3160_21315 PF00959 Phage lysozyme E3160_21320 PF07041 Protein of unknown function (DUF1327) E3160_21325 PF04971 Bacteriophage P21 holin S E3160_21330 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase E3160_21350 PF00149 Calcineurin-like phosphoesterase E3160_21435 PF17621 Family of unknown function (DUF5508) E3160_21445 PF00128 Alpha amylase, catalytic domain E3160_21450 PF00128 Alpha amylase, catalytic domain E3160_21455 PF08943 CsiD E3160_21460 PF01266 FAD dependent oxidoreductase E3160_21465 PF00171 Aldehyde dehydrogenase family E3160_21470 PF00202 Aminotransferase class-III E3160_21475 PF00324 Amino acid permease E3160_21480 PF00392 Bacterial regulatory proteins, gntR family E3160_21480 PF07729 FCD domain E3160_21485 PF01476 LysM domain E3160_21485 PF04972 BON domain E3160_21490 PF01679 Proteolipid membrane potential modulator E3160_21495 PF01022 Bacterial regulatory protein, arsR family E3160_21500 PF11127 Protein of unknown function (DUF2892) E3160_21500 PF00581 Rhodanese-like domain E3160_21505 PF00816 H-NS histone family E3160_21510 PF06610 L-alanine exporter E3160_21515 PF09400 Protein of unknown function (DUF2002) E3160_21520 PF05957 Bacterial protein of unknown function (DUF883) E3160_21525 PF00392 Bacterial regulatory proteins, gntR family E3160_21525 PF00155 Aminotransferase class I and II E3160_21530 PF02627 Carboxymuconolactone decarboxylase family E3160_21540 PF00462 Glutaredoxin E3160_21545 PF07972 NrdI Flavodoxin like E3160_21550 PF08343 Ribonucleotide reductase N-terminal E3160_21550 PF02867 Ribonucleotide reductase, barrel domain E3160_21550 PF00317 Ribonucleotide reductase, all-alpha domain E3160_21555 PF00268 Ribonucleotide reductase, small chain E3160_21565 PF00571 CBS domain E3160_21565 PF00005 ABC transporter E3160_21570 PF00528 Binding-protein-dependent transport system inner membrane component E3160_21575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3160_21580 PF07690 Major Facilitator Superfamily E3160_21585 PF03591 AzlC protein E3160_21590 PF05437 Branched-chain amino acid transport protein (AzlD) E3160_21595 PF01047 MarR family E3160_21600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_21600 PF00529 HlyD membrane-fusion protein of T1SS E3160_21605 PF07690 Major Facilitator Superfamily E3160_21610 PF02664 S-Ribosylhomocysteinase (LuxS) E3160_21615 PF04262 Glutamate-cysteine ligase E3160_21620 PF09335 SNARE associated Golgi protein E3160_21625 PF13419 Haloacid dehalogenase-like hydrolase E3160_21655 PF02599 Global regulator protein family E3160_21660 PF02272 DHHA1 domain E3160_21660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3160_21660 PF01411 tRNA synthetases class II (A) E3160_21665 PF02631 RecX family E3160_21670 PF00154 recA bacterial DNA recombination protein E3160_21675 PF02464 Competence-damaged protein E3160_21680 PF13406 Transglycosylase SLT domain E3160_21685 PF03608 PTS system enzyme II sorbitol-specific factor E3160_21695 PF03829 PTS system glucitol/sorbitol-specific IIA component E3160_21700 PF00106 short chain dehydrogenase E3160_21705 PF06923 Glucitol operon activator protein (GutM) E3160_21710 PF00455 DeoR C terminal sensor domain E3160_21710 PF08220 DeoR-like helix-turn-helix domain E3160_21715 PF00571 CBS domain E3160_21715 PF01380 SIS domain E3160_21720 PF00158 Sigma-54 interaction domain E3160_21720 PF01590 GAF domain E3160_21725 PF00258 Flavodoxin E3160_21725 PF00753 Metallo-beta-lactamase superfamily E3160_21725 PF00301 Rubredoxin E3160_21730 PF18113 Rubredoxin binding C-terminal domain E3160_21730 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_21735 PF01300 Telomere recombination E3160_21735 PF00708 Acylphosphatase E3160_21735 PF07503 HypF finger E3160_21735 PF17788 HypF Kae1-like domain E3160_21740 PF13247 4Fe-4S dicluster domain E3160_21740 PF12800 4Fe-4S binding domain E3160_21745 PF00356 Bacterial regulatory proteins, lacI family E3160_21750 PF00367 phosphotransferase system, EIIB E3160_21750 PF02378 Phosphotransferase system, EIIC E3160_21755 PF00232 Glycosyl hydrolase family 1 E3160_21760 PF01750 Hydrogenase maturation protease E3160_21765 PF07450 Formate hydrogenlyase maturation protein HycH E3160_21770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3160_21775 PF12838 4Fe-4S dicluster domain E3160_21780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E3160_21780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E3160_21780 PF00374 Nickel-dependent hydrogenase E3160_21785 PF00146 NADH dehydrogenase E3160_21790 PF00361 Proton-conducting membrane transporter E3160_21795 PF13247 4Fe-4S dicluster domain E3160_21800 PF11046 Transcriptional repressor of hyc and hyp operons E3160_21805 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E3160_21810 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3160_21815 PF01455 HupF/HypC family E3160_21820 PF01924 Hydrogenase formation hypA family E3160_21825 PF02769 AIR synthase related protein, C-terminal domain E3160_21825 PF00586 AIR synthase related protein, N-terminal domain E3160_21830 PF01590 GAF domain E3160_21830 PF00158 Sigma-54 interaction domain E3160_21835 PF11756 Nitrous oxide-stimulated promoter E3160_21840 PF05190 MutS family domain IV E3160_21840 PF00488 MutS domain V E3160_21840 PF05188 MutS domain II E3160_21840 PF05192 MutS domain III E3160_21840 PF01624 MutS domain I E3160_21845 PF00149 Calcineurin-like phosphoesterase E3160_21855 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E3160_21860 PF02441 Flavoprotein E3160_21865 PF01047 MarR family E3160_21870 PF04539 Sigma-70 region 3 E3160_21870 PF04542 Sigma-70 region 2 E3160_21870 PF00140 Sigma-70 factor, region 1.2 E3160_21870 PF04545 Sigma-70, region 4 E3160_21875 PF01551 Peptidase family M23 E3160_21875 PF01476 LysM domain E3160_21885 PF01975 Survival protein SurE E3160_21890 PF01142 tRNA pseudouridine synthase D (TruD) E3160_21895 PF02542 YgbB family E3160_21900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E3160_21905 PF04977 Septum formation initiator E3160_21910 PF12084 Protein of unknown function (DUF3561) E3160_21920 PF00009 Elongation factor Tu GTP binding domain E3160_21925 PF01507 Phosphoadenosine phosphosulfate reductase family E3160_21930 PF04389 Peptidase family M28 E3160_21935 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) E3160_21940 PF01867 CRISPR associated protein Cas1 E3160_21950 PF09704 CRISPR-associated protein (Cas_Cas5) E3160_21955 PF09344 CT1975-like protein E3160_21965 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) E3160_21970 PF00271 Helicase conserved C-terminal domain E3160_21970 PF00270 DEAD/DEAH box helicase E3160_21970 PF18019 HD domain E3160_21975 PF01848 Hok/gef family E3160_21985 PF01507 Phosphoadenosine phosphosulfate reductase family E3160_21990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E3160_21990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3160_21995 PF00175 Oxidoreductase NAD-binding domain E3160_21995 PF00667 FAD binding domain E3160_21995 PF00258 Flavodoxin E3160_22000 PF01242 6-pyruvoyl tetrahydropterin synthase E3160_22005 PF01266 FAD dependent oxidoreductase E3160_22015 PF04309 Glycerol-3-phosphate responsive antiterminator E3160_22025 PF01012 Electron transfer flavoprotein domain E3160_22035 PF01565 FAD binding domain E3160_22035 PF02913 FAD linked oxidases, C-terminal domain E3160_22045 PF07690 Major Facilitator Superfamily E3160_22050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3160_22050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3160_22055 PF04055 Radical SAM superfamily E3160_22065 PF04536 TPM domain E3160_22075 PF04536 TPM domain E3160_22080 PF00113 Enolase, C-terminal TIM barrel domain E3160_22080 PF03952 Enolase, N-terminal domain E3160_22085 PF00117 Glutamine amidotransferase class-I E3160_22085 PF06418 CTP synthase N-terminus E3160_22090 PF03819 MazG nucleotide pyrophosphohydrolase domain E3160_22095 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system E3160_22100 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E3160_22105 PF04607 Region found in RelA / SpoT proteins E3160_22105 PF02824 TGS domain E3160_22105 PF13291 ACT domain E3160_22110 PF01938 TRAM domain E3160_22110 PF05958 tRNA (Uracil-5-)-methyltransferase E3160_22115 PF00672 HAMP domain E3160_22115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_22115 PF00512 His Kinase A (phospho-acceptor) domain E3160_22115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E3160_22115 PF01627 Hpt domain E3160_22115 PF00072 Response regulator receiver domain E3160_22120 PF13378 Enolase C-terminal domain-like E3160_22125 PF13378 Enolase C-terminal domain-like E3160_22125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3160_22130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3160_22130 PF13378 Enolase C-terminal domain-like E3160_22135 PF07690 Major Facilitator Superfamily E3160_22140 PF00258 Flavodoxin E3160_22145 PF00849 RNA pseudouridylate synthase E3160_22150 PF04287 tRNA pseudouridine synthase C E3160_22155 PF07348 Syd protein (SUKH-2) E3160_22160 PF14489 QueF-like protein E3160_22160 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E3160_22165 PF03641 Possible lysine decarboxylase E3160_22165 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases E3160_22165 PF11892 Domain of unknown function (DUF3412) E3160_22175 PF03315 Serine dehydratase beta chain E3160_22175 PF03313 Serine dehydratase alpha chain E3160_22180 PF01367 5'-3' exonuclease, C-terminal SAM fold E3160_22180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E3160_22185 PF00465 Iron-containing alcohol dehydrogenase E3160_22190 PF00596 Class II Aldolase and Adducin N-terminal domain E3160_22195 PF07690 Major Facilitator Superfamily E3160_22200 PF02952 L-fucose isomerase, C-terminal domain E3160_22200 PF07881 L-fucose isomerase, first N-terminal domain E3160_22200 PF07882 L-fucose isomerase, second N-terminal domain E3160_22205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3160_22205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3160_22210 PF05025 RbsD / FucU transport protein family E3160_22215 PF08220 DeoR-like helix-turn-helix domain E3160_22215 PF00455 DeoR C terminal sensor domain E3160_22220 PF18125 RlmM ferredoxin-like domain E3160_22220 PF01728 FtsJ-like methyltransferase E3160_22225 PF04241 Protein of unknown function (DUF423) E3160_22230 PF03466 LysR substrate binding domain E3160_22230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_22235 PF06004 Bacterial protein of unknown function (DUF903) E3160_22240 PF00266 Aminotransferase class-V E3160_22245 PF02657 Fe-S metabolism associated domain E3160_22250 PF00899 ThiF family E3160_22255 PF03562 MltA specific insert domain E3160_22255 PF06725 3D domain E3160_22275 PF01520 N-acetylmuramoyl-L-alanine amidase E3160_22275 PF11741 AMIN domain E3160_22280 PF00583 Acetyltransferase (GNAT) family E3160_22280 PF00696 Amino acid kinase family E3160_22285 PF13538 UvrD-like helicase C-terminal domain E3160_22290 PF00580 UvrD/REP helicase N-terminal domain E3160_22290 PF13361 UvrD-like helicase C-terminal domain E3160_22290 PF12705 PD-(D/E)XK nuclease superfamily E3160_22295 PF16187 Middle or third domain of peptidase_M16 E3160_22295 PF00675 Insulinase (Peptidase family M16) E3160_22295 PF05193 Peptidase M16 inactive domain E3160_22300 PF17946 RecC C-terminal domain E3160_22305 PF07963 Prokaryotic N-terminal methylation motif E3160_22305 PF12528 Type II secretion prepilin peptidase dependent protein C E3160_22310 PF10713 Protein of unknown function (DUF2509) E3160_22315 PF07963 Prokaryotic N-terminal methylation motif E3160_22320 PF07963 Prokaryotic N-terminal methylation motif E3160_22325 PF00303 Thymidylate synthase E3160_22330 PF01790 Prolipoprotein diacylglyceryl transferase E3160_22335 PF05524 PEP-utilising enzyme, N-terminal E3160_22335 PF00391 PEP-utilising enzyme, mobile domain E3160_22335 PF02896 PEP-utilising enzyme, TIM barrel domain E3160_22335 PF01590 GAF domain E3160_22340 PF00293 NUDIX domain E3160_22350 PF02976 DNA mismatch repair enzyme MutH E3160_22355 PF03741 Integral membrane protein TerC family E3160_22360 PF06004 Bacterial protein of unknown function (DUF903) E3160_22365 PF00248 Aldo/keto reductase family E3160_22370 PF07690 Major Facilitator Superfamily E3160_22375 PF01553 Acyltransferase E3160_22375 PF00501 AMP-binding enzyme E3160_22380 PF00356 Bacterial regulatory proteins, lacI family E3160_22385 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E3160_22385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E3160_22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_22390 PF03466 LysR substrate binding domain E3160_22395 PF01177 Asp/Glu/Hydantoin racemase E3160_22400 PF00083 Sugar (and other) transporter E3160_22410 PF04962 KduI/IolB family E3160_22415 PF02803 Thiolase, C-terminal domain E3160_22415 PF00108 Thiolase, N-terminal domain E3160_22420 PF03222 Tryptophan/tyrosine permease family E3160_22425 PF00196 Bacterial regulatory proteins, luxR family E3160_22430 PF00486 Transcriptional regulatory protein, C terminal E3160_22455 PF07720 Tetratricopeptide repeat E3160_22465 PF00486 Transcriptional regulatory protein, C terminal E3160_22480 PF05717 IS66 Orf2 like protein E3160_22485 PF13005 zinc-finger binding domain of transposase IS66 E3160_22485 PF13007 Transposase C of IS166 homeodomain E3160_22485 PF13817 IS66 C-terminal element E3160_22485 PF03050 Transposase IS66 family E3160_22490 PF01464 Transglycosylase SLT domain E3160_22495 PF00072 Response regulator receiver domain E3160_22495 PF00196 Bacterial regulatory proteins, luxR family E3160_22510 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) E3160_22515 PF01514 Secretory protein of YscJ/FliF family E3160_22525 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF E3160_22530 PF09480 Type III secretion system protein PrgH-EprH (PrgH) E3160_22550 PF01312 FlhB HrpN YscU SpaS Family E3160_22560 PF01313 Bacterial export proteins, family 3 E3160_22565 PF00813 FliP family E3160_22570 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3160_22590 PF18269 T3SS EscN ATPase C-terminal domain E3160_22590 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3160_22590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3160_22595 PF00771 FHIPEP family E3160_22600 PF07201 HrpJ-like domain E3160_22605 PF03958 Bacterial type II/III secretion system short domain E3160_22605 PF00263 Bacterial type II and III secretion system protein E3160_22610 PF12833 Helix-turn-helix domain E3160_22630 PF01551 Peptidase family M23 E3160_22630 PF01476 LysM domain E3160_22635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E3160_22635 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E3160_22640 PF00941 FAD binding domain in molybdopterin dehydrogenase E3160_22640 PF03450 CO dehydrogenase flavoprotein C-terminal domain E3160_22645 PF01799 [2Fe-2S] binding domain E3160_22645 PF00111 2Fe-2S iron-sulfur cluster binding domain E3160_22655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3160_22655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3160_22660 PF00291 Pyridoxal-phosphate dependent enzyme E3160_22665 PF01546 Peptidase family M20/M25/M40 E3160_22665 PF07687 Peptidase dimerisation domain E3160_22670 PF01979 Amidohydrolase family E3160_22675 PF00696 Amino acid kinase family E3160_22680 PF13478 XdhC Rossmann domain E3160_22680 PF02625 XdhC and CoxI family E3160_22690 PF12804 MobA-like NTP transferase domain E3160_22695 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_22695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3160_22700 PF01979 Amidohydrolase family E3160_22705 PF00941 FAD binding domain in molybdopterin dehydrogenase E3160_22710 PF01799 [2Fe-2S] binding domain E3160_22710 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E3160_22710 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E3160_22715 PF00860 Permease family E3160_22720 PF01979 Amidohydrolase family E3160_22725 PF00860 Permease family E3160_22740 PF00860 Permease family E3160_22755 PF00293 NUDIX domain E3160_22760 PF01336 OB-fold nucleic acid binding domain E3160_22760 PF00152 tRNA synthetases class II (D, K and N) E3160_22770 PF01368 DHH family E3160_22770 PF02272 DHHA1 domain E3160_22770 PF17768 RecJ OB domain E3160_22775 PF10411 Disulfide bond isomerase protein N-terminus E3160_22775 PF13098 Thioredoxin-like domain E3160_22780 PF02899 Phage integrase, N-terminal SAM-like domain E3160_22780 PF00589 Phage integrase family E3160_22785 PF00258 Flavodoxin E3160_22790 PF07254 Membrane-bound toxin component of toxin-antitoxin system E3160_22795 PF03937 Flavinator of succinate dehydrogenase E3160_22800 PF01571 Aminomethyltransferase folate-binding domain E3160_22805 PF03006 Haemolysin-III related E3160_22815 PF00232 Glycosyl hydrolase family 1 E3160_22820 PF02347 Glycine cleavage system P-protein E3160_22825 PF01597 Glycine cleavage H-protein E3160_22830 PF01571 Aminomethyltransferase folate-binding domain E3160_22830 PF08669 Glycine cleavage T-protein C-terminal barrel domain E3160_22840 PF01494 FAD binding domain E3160_22845 PF01494 FAD binding domain E3160_22850 PF00557 Metallopeptidase family M24 E3160_22850 PF05195 Aminopeptidase P, N-terminal domain E3160_22855 PF03695 Uncharacterised protein family (UPF0149) E3160_22860 PF05164 Cell division protein ZapA E3160_22870 PF01812 5-formyltetrahydrofolate cyclo-ligase family E3160_22885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3160_22885 PF01842 ACT domain E3160_22885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3160_22890 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E3160_22895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_22895 PF03466 LysR substrate binding domain E3160_22900 PF01642 Methylmalonyl-CoA mutase E3160_22900 PF02310 B12 binding domain E3160_22910 PF00378 Enoyl-CoA hydratase/isomerase E3160_22915 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain E3160_22915 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain E3160_22920 PF03466 LysR substrate binding domain E3160_22920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_22925 PF03466 LysR substrate binding domain E3160_22925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_22930 PF04402 Protein of unknown function (DUF541) E3160_22935 PF01810 LysE type translocator E3160_22940 PF00924 Mechanosensitive ion channel E3160_22940 PF05552 Conserved TM helix E3160_22945 PF01116 Fructose-bisphosphate aldolase class-II E3160_22950 PF00162 Phosphoglycerate kinase E3160_22955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E3160_22955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E3160_22975 PF00005 ABC transporter E3160_22980 PF00005 ABC transporter E3160_22990 PF05068 Mannitol repressor E3160_22995 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E3160_23000 PF00107 Zinc-binding dehydrogenase E3160_23000 PF08240 Alcohol dehydrogenase GroES-like domain E3160_23005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_23005 PF02378 Phosphotransferase system, EIIC E3160_23010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_23015 PF02780 Transketolase, C-terminal domain E3160_23015 PF00456 Transketolase, thiamine diphosphate binding domain E3160_23015 PF02779 Transketolase, pyrimidine binding domain E3160_23020 PF01435 Peptidase family M48 E3160_23025 PF00491 Arginase family E3160_23035 PF17810 Arginine decarboxylase helical bundle domain E3160_23035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E3160_23035 PF17944 Arginine decarboxylase C-terminal helical extension E3160_23040 PF11036 Virulence promoting factor E3160_23045 PF17430 Uncharacterized YqgC-like E3160_23055 PF00438 S-adenosylmethionine synthetase, N-terminal domain E3160_23055 PF02773 S-adenosylmethionine synthetase, C-terminal domain E3160_23055 PF02772 S-adenosylmethionine synthetase, central domain E3160_23060 PF00083 Sugar (and other) transporter E3160_23065 PF10263 SprT-like family E3160_23065 PF17283 SprT-like zinc ribbon domain E3160_23070 PF04231 Endonuclease I E3160_23075 PF04452 RNA methyltransferase E3160_23080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E3160_23080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E3160_23085 PF02622 Uncharacterized ACR, COG1678 E3160_23090 PF03652 Holliday junction resolvase E3160_23095 PF00437 Type II/IV secretion system protein E3160_23100 PF01168 Alanine racemase, N-terminal domain E3160_23105 PF02325 YGGT family E3160_23110 PF02594 Uncharacterised ACR, YggU family COG1872 E3160_23115 PF01725 Ham1 family E3160_23120 PF04055 Radical SAM superfamily E3160_23120 PF06969 HemN C-terminal domain E3160_23125 PF06717 Protein of unknown function (DUF1202) E3160_23130 PF17763 Glutaminase/Asparaginase C-terminal domain E3160_23130 PF00710 Asparaginase, N-terminal E3160_23135 PF11101 Protein of unknown function (DUF2884) E3160_23140 PF04320 Protein with unknown function (DUF469) E3160_23145 PF02390 Putative methyltransferase E3160_23150 PF10576 Iron-sulfur binding domain of endonuclease III E3160_23150 PF00730 HhH-GPD superfamily base excision DNA repair protein E3160_23150 PF00633 Helix-hairpin-helix motif E3160_23150 PF14815 NUDIX domain E3160_23155 PF04362 Bacterial Fe(2+) trafficking E3160_23160 PF01464 Transglycosylase SLT domain E3160_23160 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E3160_23165 PF03825 Nucleoside H+ symporter E3160_23170 PF01276 Orn/Lys/Arg decarboxylase, major domain E3160_23170 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3160_23170 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3160_23175 PF04474 Protein of unknown function (DUF554) E3160_23185 PF00589 Phage integrase family E3160_23185 PF13356 Arm DNA-binding domain E3160_23205 PF05717 IS66 Orf2 like protein E3160_23220 PF06316 Enterobacterial Ail/Lom protein E3160_23280 PF05717 IS66 Orf2 like protein E3160_23285 PF13817 IS66 C-terminal element E3160_23285 PF13007 Transposase C of IS166 homeodomain E3160_23285 PF13005 zinc-finger binding domain of transposase IS66 E3160_23285 PF03050 Transposase IS66 family E3160_23295 PF05717 IS66 Orf2 like protein E3160_23320 PF03738 Glutathionylspermidine synthase preATP-grasp E3160_23320 PF05257 CHAP domain E3160_23325 PF02798 Glutathione S-transferase, N-terminal domain E3160_23330 PF01455 HupF/HypC family E3160_23335 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E3160_23340 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE E3160_23345 PF01750 Hydrogenase maturation protease E3160_23350 PF00374 Nickel-dependent hydrogenase E3160_23355 PF03916 Polysulphide reductase, NrfD E3160_23360 PF13247 4Fe-4S dicluster domain E3160_23365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3160_23365 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E3160_23370 PF11115 Protein of unknown function (DUF2623) E3160_23375 PF01738 Dienelactone hydrolase family E3160_23380 PF00248 Aldo/keto reductase family E3160_23385 PF03350 Uncharacterized protein family, UPF0114 E3160_23395 PF02472 Biopolymer transport protein ExbD/TolR E3160_23400 PF01618 MotA/TolQ/ExbB proton channel family E3160_23405 PF01053 Cys/Met metabolism PLP-dependent enzyme E3160_23410 PF09335 SNARE associated Golgi protein E3160_23415 PF12833 Helix-turn-helix domain E3160_23415 PF06719 AraC-type transcriptional regulator N-terminus E3160_23420 PF00465 Iron-containing alcohol dehydrogenase E3160_23425 PF00248 Aldo/keto reductase family E3160_23435 PF04728 Lipoprotein leucine-zipper E3160_23440 PF08497 Radical SAM N-terminal E3160_23440 PF11842 Domain of unknown function (DUF3362) E3160_23440 PF04055 Radical SAM superfamily E3160_23445 PF00394 Multicopper oxidase E3160_23445 PF07732 Multicopper oxidase E3160_23445 PF07731 Multicopper oxidase E3160_23450 PF01553 Acyltransferase E3160_23455 PF00521 DNA gyrase/topoisomerase IV, subunit A E3160_23455 PF03989 DNA gyrase C-terminal domain, beta-propeller E3160_23460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_23465 PF06445 GyrI-like small molecule binding domain E3160_23470 PF04076 Bacterial OB fold (BOF) protein E3160_23475 PF00072 Response regulator receiver domain E3160_23475 PF00486 Transcriptional regulatory protein, C terminal E3160_23480 PF08521 Two-component sensor kinase N-terminal E3160_23480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_23480 PF00512 His Kinase A (phospho-acceptor) domain E3160_23485 PF02525 Flavodoxin-like fold E3160_23490 PF03992 Antibiotic biosynthesis monooxygenase E3160_23495 PF01418 Helix-turn-helix domain, rpiR family E3160_23495 PF01380 SIS domain E3160_23505 PF01032 FecCD transport family E3160_23510 PF01032 FecCD transport family E3160_23515 PF00005 ABC transporter E3160_23520 PF07715 TonB-dependent Receptor Plug Domain E3160_23525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_23525 PF00986 DNA gyrase B subunit, carboxyl terminus E3160_23525 PF00204 DNA gyrase B E3160_23525 PF01751 Toprim domain E3160_23530 PF05728 Uncharacterised protein family (UPF0227) E3160_23535 PF00149 Calcineurin-like phosphoesterase E3160_23540 PF06853 Protein of unknown function (DUF1249) E3160_23545 PF00293 NUDIX domain E3160_23550 PF02321 Outer membrane efflux protein E3160_23555 PF06693 Protein of unknown function (DUF1190) E3160_23560 PF03738 Glutathionylspermidine synthase preATP-grasp E3160_23565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E3160_23570 PF02535 ZIP Zinc transporter E3160_23575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E3160_23580 PF04380 Membrane fusogenic activity E3160_23585 PF08971 Glycogen synthesis protein E3160_23590 PF07290 Protein of unknown function (DUF1449) E3160_23595 PF01145 SPFH domain / Band 7 family E3160_23595 PF15975 Flotillin E3160_23610 PF00294 pfkB family carbohydrate kinase E3160_23610 PF01467 Cytidylyltransferase-like E3160_23615 PF08335 GlnD PII-uridylyltransferase E3160_23615 PF03710 Glutamate-ammonia ligase adenylyltransferase E3160_23620 PF01928 CYTH domain E3160_23625 PF08239 Bacterial SH3 domain E3160_23630 PF01966 HD domain E3160_23630 PF01743 Poly A polymerase head domain E3160_23630 PF12627 Probable RNA and SrmB- binding site of polymerase A E3160_23635 PF02673 Bacitracin resistance protein BacA E3160_23640 PF02152 Dihydroneopterin aldolase E3160_23645 PF02660 Glycerol-3-phosphate acyltransferase E3160_23650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_23650 PF03466 LysR substrate binding domain E3160_23655 PF05681 Fumarate hydratase (Fumerase) E3160_23660 PF05683 Fumarase C-terminus E3160_23665 PF00939 Sodium:sulfate symporter transmembrane region E3160_23670 PF00814 Glycoprotease family E3160_23675 PF01165 Ribosomal protein S21 E3160_23680 PF10410 DnaB-helicase binding domain of primase E3160_23680 PF08278 DNA primase DnaG DnaB-binding E3160_23680 PF01807 CHC2 zinc finger E3160_23680 PF08275 DNA primase catalytic core, N-terminal domain E3160_23685 PF04545 Sigma-70, region 4 E3160_23685 PF04546 Sigma-70, non-essential region E3160_23685 PF03979 Sigma-70 factor, region 1.1 E3160_23685 PF04539 Sigma-70 region 3 E3160_23685 PF00140 Sigma-70 factor, region 1.2 E3160_23685 PF04542 Sigma-70 region 2 E3160_23690 PF03167 Uracil DNA glycosylase superfamily E3160_23700 PF04954 Siderophore-interacting protein E3160_23700 PF08021 Siderophore-interacting FAD-binding domain E3160_23705 PF03551 Transcriptional regulator PadR-like family E3160_23710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3160_23710 PF08447 PAS fold E3160_23715 PF00202 Aminotransferase class-III E3160_23720 PF01588 Putative tRNA binding domain E3160_23725 PF00356 Bacterial regulatory proteins, lacI family E3160_23730 PF16353 Domain of unknown function(DUF4981) E3160_23730 PF02929 Beta galactosidase small chain E3160_23730 PF00703 Glycosyl hydrolases family 2 E3160_23730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E3160_23730 PF02837 Glycosyl hydrolases family 2, sugar binding domain E3160_23735 PF04074 YhcH/YjgK/YiaL E3160_23740 PF13520 Amino acid permease E3160_23750 PF01204 Trehalase E3160_23755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E3160_23755 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_23760 PF01381 Helix-turn-helix E3160_23765 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system E3160_23770 PF05175 Methyltransferase small domain E3160_23775 PF01863 Protein of unknown function DUF45 E3160_23780 PF02698 DUF218 domain E3160_23785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3160_23790 PF03741 Integral membrane protein TerC family E3160_23795 PF00375 Sodium:dicarboxylate symporter family E3160_23800 PF10688 Bacterial inner membrane protein E3160_23805 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E3160_23805 PF08666 SAF domain E3160_23810 PF02614 Glucuronate isomerase E3160_23815 PF07690 Major Facilitator Superfamily E3160_23820 PF00392 Bacterial regulatory proteins, gntR family E3160_23820 PF07729 FCD domain E3160_23825 PF09335 SNARE associated Golgi protein E3160_23830 PF13721 SecD export protein N-terminal TM region E3160_23835 PF06476 Protein of unknown function (DUF1090) E3160_23840 PF05957 Bacterial protein of unknown function (DUF883) E3160_23845 PF07332 Putative Actinobacterial Holin-X, holin superfamily III E3160_23850 PF13997 YqjK-like protein E3160_23855 PF07681 DoxX E3160_23860 PF13409 Glutathione S-transferase, N-terminal domain E3160_23865 PF05656 Protein of unknown function (DUF805) E3160_23870 PF05656 Protein of unknown function (DUF805) E3160_23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_23875 PF03466 LysR substrate binding domain E3160_23880 PF17954 Quercetinase C-terminal cupin domain E3160_23880 PF02678 Pirin E3160_23890 PF03313 Serine dehydratase alpha chain E3160_23900 PF03313 Serine dehydratase alpha chain E3160_23900 PF03315 Serine dehydratase beta chain E3160_23905 PF01042 Endoribonuclease L-PSP E3160_23910 PF02901 Pyruvate formate lyase-like E3160_23910 PF01228 Glycine radical E3160_23915 PF00871 Acetokinase family E3160_23920 PF03222 Tryptophan/tyrosine permease family E3160_23925 PF00291 Pyridoxal-phosphate dependent enzyme E3160_23930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_23930 PF03466 LysR substrate binding domain E3160_23955 PF02595 Glycerate kinase family E3160_23960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3160_23960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3160_23965 PF03328 HpcH/HpaI aldolase/citrate lyase family E3160_23970 PF07690 Major Facilitator Superfamily E3160_23975 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E3160_23975 PF08666 SAF domain E3160_23980 PF15937 prlF antitoxin for toxin YhaV_toxin E3160_23985 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system E3160_23990 PF08220 DeoR-like helix-turn-helix domain E3160_23990 PF00455 DeoR C terminal sensor domain E3160_23995 PF08013 Tagatose 6 phosphate kinase E3160_24000 PF03830 PTS system sorbose subfamily IIB component E3160_24005 PF03609 PTS system sorbose-specific iic component E3160_24010 PF03613 PTS system mannose/fructose/sorbose family IID component E3160_24015 PF03610 PTS system fructose IIA component E3160_24025 PF01380 SIS domain E3160_24030 PF01116 Fructose-bisphosphate aldolase class-II E3160_24035 PF03830 PTS system sorbose subfamily IIB component E3160_24045 PF03613 PTS system mannose/fructose/sorbose family IID component E3160_24055 PF00419 Fimbrial protein E3160_24060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_24060 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_24070 PF13954 PapC N-terminal domain E3160_24070 PF00577 Outer membrane usher protein E3160_24070 PF13953 PapC C-terminal domain E3160_24085 PF00419 Fimbrial protein E3160_24090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3160_24095 PF04348 LppC putative lipoprotein E3160_24100 PF02021 Uncharacterised protein family UPF0102 E3160_24105 PF13580 SIS domain E3160_24110 PF04972 BON domain E3160_24115 PF03773 Predicted permease E3160_24120 PF13460 NAD(P)H-binding E3160_24125 PF01965 DJ-1/PfpI family E3160_24135 PF01541 GIY-YIG catalytic domain E3160_24140 PF13508 Acetyltransferase (GNAT) domain E3160_24145 PF02036 SCP-2 sterol transfer family E3160_24150 PF01136 Peptidase family U32 E3160_24155 PF01136 Peptidase family U32 E3160_24160 PF00296 Luciferase-like monooxygenase E3160_24165 PF03222 Tryptophan/tyrosine permease family E3160_24170 PF00270 DEAD/DEAH box helicase E3160_24170 PF03880 DbpA RNA binding domain E3160_24170 PF12343 Cold shock protein DEAD box A E3160_24170 PF00271 Helicase conserved C-terminal domain E3160_24180 PF13181 Tetratricopeptide repeat E3160_24180 PF07719 Tetratricopeptide repeat E3160_24185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E3160_24185 PF03725 3' exoribonuclease family, domain 2 E3160_24185 PF00013 KH domain E3160_24185 PF01138 3' exoribonuclease family, domain 1 E3160_24185 PF00575 S1 RNA binding domain E3160_24190 PF00312 Ribosomal protein S15 E3160_24195 PF16198 tRNA pseudouridylate synthase B C-terminal domain E3160_24195 PF01509 TruB family pseudouridylate synthase (N terminal domain) E3160_24195 PF09157 Pseudouridine synthase II TruB, C-terminal E3160_24200 PF02033 Ribosome-binding factor A E3160_24205 PF11987 Translation-initiation factor 2 E3160_24205 PF04760 Translation initiation factor IF-2, N-terminal region E3160_24205 PF08364 Bacterial translation initiation factor IF-2 associated region E3160_24205 PF00009 Elongation factor Tu GTP binding domain E3160_24210 PF13184 NusA-like KH domain E3160_24210 PF08529 NusA N-terminal domain E3160_24210 PF00575 S1 RNA binding domain E3160_24215 PF02576 RimP N-terminal domain E3160_24215 PF17384 RimP C-terminal SH3 domain E3160_24225 PF00764 Arginosuccinate synthase E3160_24230 PF00884 Sulfatase E3160_24240 PF03840 Preprotein translocase SecG subunit E3160_24245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3160_24245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3160_24245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3160_24245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3160_24250 PF00809 Pterin binding enzyme E3160_24255 PF17862 AAA+ lid domain E3160_24255 PF06480 FtsH Extracellular E3160_24255 PF00004 ATPase family associated with various cellular activities (AAA) E3160_24255 PF01434 Peptidase family M41 E3160_24260 PF01728 FtsJ-like methyltransferase E3160_24265 PF01985 CRS1 / YhbY (CRM) domain E3160_24270 PF01272 Transcription elongation factor, GreA/GreB, C-term E3160_24270 PF03449 Transcription elongation factor, N-terminal E3160_24275 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E3160_24280 PF01926 50S ribosome-binding GTPase E3160_24280 PF01018 GTP1/OBG E3160_24285 PF00892 EamA-like transporter family E3160_24290 PF01016 Ribosomal L27 protein E3160_24295 PF00829 Ribosomal prokaryotic L21 protein E3160_24300 PF00348 Polyprenyl synthetase E3160_24305 PF13693 Winged helix-turn-helix DNA-binding E3160_24310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E3160_24315 PF01722 BolA-like protein E3160_24320 PF13466 STAS domain E3160_24325 PF05494 MlaC protein E3160_24330 PF02470 MlaD protein E3160_24335 PF02405 Permease MlaE E3160_24340 PF00005 ABC transporter E3160_24345 PF01699 Sodium/calcium exchanger protein E3160_24350 PF00571 CBS domain E3160_24350 PF01380 SIS domain E3160_24360 PF06835 Lipopolysaccharide-assembly, LptC-related E3160_24365 PF03968 OstA-like protein E3160_24370 PF00005 ABC transporter E3160_24370 PF12399 Branched-chain amino acid ATP-binding cassette transporter E3160_24375 PF04552 Sigma-54, DNA binding domain E3160_24375 PF04963 Sigma-54 factor, core binding domain E3160_24375 PF00309 Sigma-54 factor, Activator interacting domain (AID) E3160_24380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E3160_24385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_24390 PF03668 P-loop ATPase protein family E3160_24395 PF00381 PTS HPr component phosphorylation site E3160_24400 PF10707 PhoP regulatory network protein YrbL E3160_24405 PF00912 Transglycosylase E3160_24415 PF01627 Hpt domain E3160_24415 PF18415 Histidine kinase receptor ArcB trans-membrane domain E3160_24415 PF00989 PAS fold E3160_24415 PF00072 Response regulator receiver domain E3160_24415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_24415 PF00512 His Kinase A (phospho-acceptor) domain E3160_24420 PF04055 Radical SAM superfamily E3160_24420 PF16199 Radical_SAM C-terminal domain E3160_24425 PF00310 Glutamine amidotransferases class-II E3160_24425 PF01645 Conserved region in glutamate synthase E3160_24425 PF01493 GXGXG motif E3160_24425 PF04898 Glutamate synthase central domain E3160_24430 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_24430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3160_24440 PF04074 YhcH/YjgK/YiaL E3160_24445 PF00480 ROK family E3160_24450 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase E3160_24455 PF07690 Major Facilitator Superfamily E3160_24460 PF00701 Dihydrodipicolinate synthetase family E3160_24465 PF00392 Bacterial regulatory proteins, gntR family E3160_24465 PF07729 FCD domain E3160_24475 PF04386 Stringent starvation protein B E3160_24480 PF02798 Glutathione S-transferase, N-terminal domain E3160_24480 PF00043 Glutathione S-transferase, C-terminal domain E3160_24490 PF00380 Ribosomal protein S9/S16 E3160_24495 PF00572 Ribosomal protein L13 E3160_24500 PF03969 AFG1-like ATPase E3160_24505 PF06295 Protein of unknown function (DUF1043) E3160_24510 PF00595 PDZ domain E3160_24510 PF13180 PDZ domain E3160_24515 PF13180 PDZ domain E3160_24520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E3160_24520 PF00056 lactate/malate dehydrogenase, NAD binding domain E3160_24525 PF01316 Arginine repressor, DNA binding domain E3160_24525 PF02863 Arginine repressor, C-terminal domain E3160_24530 PF07338 Protein of unknown function (DUF1471) E3160_24535 PF01337 Barstar (barnase inhibitor) E3160_24540 PF04632 Fusaric acid resistance protein family E3160_24545 PF13533 Biotin-lipoyl like E3160_24550 PF07869 Protein of unknown function (DUF1656) E3160_24555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_24555 PF03466 LysR substrate binding domain E3160_24560 PF01523 Putative modulator of DNA gyrase E3160_24565 PF13116 Protein of unknown function E3160_24565 PF13502 AsmA-like C-terminal region E3160_24570 PF10150 Ribonuclease E/G family E3160_24570 PF00575 S1 RNA binding domain E3160_24575 PF02545 Maf-like protein E3160_24580 PF04093 rod shape-determining protein MreD E3160_24585 PF04085 rod shape-determining protein MreC E3160_24600 PF17157 Gammaproteobacterial periplasmic sensor domain E3160_24600 PF00563 EAL domain E3160_24600 PF00990 Diguanylate cyclase, GGDEF domain E3160_24605 PF00107 Zinc-binding dehydrogenase E3160_24605 PF08240 Alcohol dehydrogenase GroES-like domain E3160_24610 PF00364 Biotin-requiring enzyme E3160_24615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3160_24615 PF02785 Biotin carboxylase C-terminal domain E3160_24615 PF00289 Biotin carboxylase, N-terminal domain E3160_24620 PF06196 Protein of unknown function (DUF997) E3160_24625 PF00474 Sodium:solute symporter family E3160_24635 PF01207 Dihydrouridine synthase (Dus) E3160_24640 PF02954 Bacterial regulatory protein, Fis family E3160_24645 PF00873 AcrB/AcrD/AcrF family E3160_24655 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3160_24660 PF00528 Binding-protein-dependent transport system inner membrane component E3160_24665 PF00528 Binding-protein-dependent transport system inner membrane component E3160_24670 PF00005 ABC transporter E3160_24715 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_24720 PF07369 Protein of unknown function (DUF1488) E3160_24725 PF01488 Shikimate / quinate 5-dehydrogenase E3160_24725 PF08501 Shikimate dehydrogenase substrate binding domain E3160_24725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E3160_24730 PF01300 Telomere recombination E3160_24735 PF01396 Topoisomerase DNA binding C4 zinc finger E3160_24740 PF04361 Protein of unknown function (DUF494) E3160_24745 PF02481 DNA recombination-mediator protein A E3160_24745 PF17782 DprA winged helix domain E3160_24750 PF01327 Polypeptide deformylase E3160_24755 PF00551 Formyl transferase E3160_24755 PF02911 Formyl transferase, C-terminal domain E3160_24760 PF01029 NusB family E3160_24760 PF01189 16S rRNA methyltransferase RsmB/F E3160_24765 PF02080 TrkA-C domain E3160_24765 PF02254 TrkA-N domain E3160_24770 PF01741 Large-conductance mechanosensitive channel, MscL E3160_24775 PF03889 Alternative ribosome-rescue factor A E3160_24780 PF13411 MerR HTH family regulatory protein E3160_24785 PF09350 Domain of unknown function (DUF1992) E3160_24790 PF01196 Ribosomal protein L17 E3160_24795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E3160_24795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E3160_24795 PF01000 RNA polymerase Rpb3/RpoA insert domain E3160_24800 PF01479 S4 domain E3160_24800 PF00163 Ribosomal protein S4/S9 N-terminal domain E3160_24805 PF00411 Ribosomal protein S11 E3160_24810 PF00416 Ribosomal protein S13/S18 E3160_24815 PF00444 Ribosomal protein L36 E3160_24820 PF00344 SecY translocase E3160_24825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E3160_24830 PF00327 Ribosomal protein L30p/L7e E3160_24835 PF00333 Ribosomal protein S5, N-terminal domain E3160_24835 PF03719 Ribosomal protein S5, C-terminal domain E3160_24840 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E3160_24845 PF00347 Ribosomal protein L6 E3160_24850 PF00410 Ribosomal protein S8 E3160_24855 PF00253 Ribosomal protein S14p/S29e E3160_24860 PF00673 ribosomal L5P family C-terminus E3160_24860 PF00281 Ribosomal protein L5 E3160_24865 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E3160_24865 PF00467 KOW motif E3160_24870 PF00238 Ribosomal protein L14p/L23e E3160_24875 PF00366 Ribosomal protein S17 E3160_24880 PF00831 Ribosomal L29 protein E3160_24885 PF00252 Ribosomal protein L16p/L10e E3160_24890 PF00189 Ribosomal protein S3, C-terminal domain E3160_24890 PF07650 KH domain E3160_24895 PF00237 Ribosomal protein L22p/L17e E3160_24900 PF00203 Ribosomal protein S19 E3160_24905 PF00181 Ribosomal Proteins L2, RNA binding domain E3160_24905 PF03947 Ribosomal Proteins L2, C-terminal domain E3160_24910 PF00276 Ribosomal protein L23 E3160_24915 PF00573 Ribosomal protein L4/L1 family E3160_24920 PF00297 Ribosomal protein L3 E3160_24925 PF00338 Ribosomal protein S10p/S20e E3160_24935 PF01478 Type IV leader peptidase family E3160_24940 PF00210 Ferritin-like domain E3160_24945 PF04324 BFD-like [2Fe-2S] binding domain E3160_24950 PF03143 Elongation factor Tu C-terminal domain E3160_24950 PF03144 Elongation factor Tu domain 2 E3160_24950 PF00009 Elongation factor Tu GTP binding domain E3160_24955 PF03144 Elongation factor Tu domain 2 E3160_24955 PF03764 Elongation factor G, domain IV E3160_24955 PF00679 Elongation factor G C-terminus E3160_24955 PF00009 Elongation factor Tu GTP binding domain E3160_24955 PF14492 Elongation Factor G, domain II E3160_24960 PF00177 Ribosomal protein S7p/S5e E3160_24965 PF00164 Ribosomal protein S12/S23 E3160_24970 PF04077 DsrH like protein E3160_24975 PF02635 DsrE/DsrF-like family E3160_24980 PF02635 DsrE/DsrF-like family E3160_24985 PF08348 YheO-like PAS domain E3160_24985 PF13309 HTH domain E3160_24990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E3160_24990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3160_24995 PF04102 SlyX E3160_25000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3160_25005 PF09526 Probable metal-binding protein (DUF2387) E3160_25010 PF02254 TrkA-N domain E3160_25010 PF00999 Sodium/hydrogen exchanger family E3160_25015 PF02525 Flavodoxin-like fold E3160_25020 PF12848 ABC transporter E3160_25020 PF00005 ABC transporter E3160_25025 PF00561 alpha/beta hydrolase fold E3160_25030 PF06794 Uncharacterised protein family (UPF0270) E3160_25035 PF00485 Phosphoribulokinase / Uridine kinase family E3160_25040 PF02566 OsmC-like protein E3160_25045 PF00027 Cyclic nucleotide-binding domain E3160_25045 PF13545 Crp-like helix-turn-helix domain E3160_25050 PF12805 FUSC-like inner membrane protein yccS E3160_25055 PF00202 Aminotransferase class-III E3160_25060 PF00117 Glutamine amidotransferase class-I E3160_25065 PF02661 Fic/DOC family E3160_25070 PF10832 Protein of unknown function (DUF2559) E3160_25075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E3160_25080 PF07690 Major Facilitator Superfamily E3160_25090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E3160_25090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3160_25090 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_25090 PF18267 Rubredoxin NAD+ reductase C-terminal domain E3160_25090 PF04324 BFD-like [2Fe-2S] binding domain E3160_25095 PF13806 Rieske-like [2Fe-2S] domain E3160_25100 PF01226 Formate/nitrite transporter E3160_25105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3160_25105 PF10414 Sirohaem synthase dimerisation region E3160_25105 PF14824 Sirohaem biosynthesis protein central E3160_25110 PF13978 Protein of unknown function (DUF4223) E3160_25115 PF13520 Amino acid permease E3160_25120 PF01380 SIS domain E3160_25125 PF01261 Xylose isomerase-like TIM barrel E3160_25130 PF00294 pfkB family carbohydrate kinase E3160_25135 PF00294 pfkB family carbohydrate kinase E3160_25140 PF00392 Bacterial regulatory proteins, gntR family E3160_25140 PF07702 UTRA domain E3160_25145 PF00579 tRNA synthetases class I (W and Y) E3160_25150 PF13419 Haloacid dehalogenase-like hydrolase E3160_25155 PF00834 Ribulose-phosphate 3 epimerase family E3160_25160 PF02086 D12 class N6 adenine-specific DNA methyltransferase E3160_25165 PF05036 Sporulation related domain E3160_25170 PF01761 3-dehydroquinate synthase E3160_25175 PF01202 Shikimate kinase E3160_25180 PF00263 Bacterial type II and III secretion system protein E3160_25180 PF03958 Bacterial type II/III secretion system short domain E3160_25185 PF10748 DNA utilization proteins HofP E3160_25195 PF05137 Fimbrial assembly protein (PilN) E3160_25205 PF00905 Penicillin binding protein transpeptidase domain E3160_25205 PF00912 Transglycosylase E3160_25205 PF17092 Penicillin-binding protein OB-like domain E3160_25210 PF00293 NUDIX domain E3160_25215 PF07095 Intracellular growth attenuator protein IgaA E3160_25220 PF13419 Haloacid dehalogenase-like hydrolase E3160_25225 PF01479 S4 domain E3160_25230 PF01430 Hsp33 protein E3160_25235 PF13687 Domain of unknown function (DUF4153) E3160_25240 PF01293 Phosphoenolpyruvate carboxykinase E3160_25245 PF00672 HAMP domain E3160_25245 PF00512 His Kinase A (phospho-acceptor) domain E3160_25245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_25250 PF00486 Transcriptional regulatory protein, C terminal E3160_25250 PF00072 Response regulator receiver domain E3160_25255 PF03449 Transcription elongation factor, N-terminal E3160_25255 PF01272 Transcription elongation factor, GreA/GreB, C-term E3160_25260 PF17674 HHH domain E3160_25260 PF16921 Tex protein YqgF-like domain E3160_25260 PF09371 Tex-like protein N-terminal domain E3160_25260 PF00575 S1 RNA binding domain E3160_25265 PF04023 FeoA domain E3160_25270 PF07670 Nucleoside recognition E3160_25270 PF07664 Ferrous iron transport protein B C terminus E3160_25270 PF02421 Ferrous iron transport protein B E3160_25270 PF17910 FeoB cytosolic helical domain E3160_25275 PF09012 FeoC like transcriptional regulator E3160_25280 PF04754 Putative transposase, YhgA-like E3160_25285 PF00561 alpha/beta hydrolase fold E3160_25290 PF00156 Phosphoribosyl transferase domain E3160_25295 PF01521 Iron-sulphur cluster biosynthesis E3160_25295 PF01106 NifU-like domain E3160_25300 PF02447 GntP family permease E3160_25305 PF02446 4-alpha-glucanotransferase E3160_25310 PF00343 Carbohydrate phosphorylase E3160_25315 PF17874 MalT-like TPR region E3160_25315 PF00196 Bacterial regulatory proteins, luxR family E3160_25330 PF01137 RNA 3'-terminal phosphate cyclase E3160_25330 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain E3160_25335 PF01139 tRNA-splicing ligase RtcB E3160_25345 PF08220 DeoR-like helix-turn-helix domain E3160_25345 PF00455 DeoR C terminal sensor domain E3160_25350 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease E3160_25350 PF01694 Rhomboid family E3160_25355 PF00581 Rhodanese-like domain E3160_25360 PF01266 FAD dependent oxidoreductase E3160_25360 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E3160_25380 PF00343 Carbohydrate phosphorylase E3160_25385 PF00534 Glycosyl transferases group 1 E3160_25385 PF08323 Starch synthase catalytic domain E3160_25390 PF00483 Nucleotidyl transferase E3160_25395 PF00128 Alpha amylase, catalytic domain E3160_25395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E3160_25395 PF18390 Glycogen debranching enzyme C-terminal domain E3160_25400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E3160_25400 PF00128 Alpha amylase, catalytic domain E3160_25400 PF02806 Alpha amylase, C-terminal all-beta domain E3160_25405 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3160_25405 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3160_25410 PF01914 MarC family integral membrane protein E3160_25425 PF16124 RecQ zinc-binding E3160_25425 PF00271 Helicase conserved C-terminal domain E3160_25425 PF00570 HRDC domain E3160_25425 PF00270 DEAD/DEAH box helicase E3160_25425 PF09382 RQC domain E3160_25430 PF09382 RQC domain E3160_25430 PF16124 RecQ zinc-binding E3160_25430 PF00570 HRDC domain E3160_25430 PF00271 Helicase conserved C-terminal domain E3160_25430 PF00270 DEAD/DEAH box helicase E3160_25435 PF02447 GntP family permease E3160_25440 PF01202 Shikimate kinase E3160_25445 PF00356 Bacterial regulatory proteins, lacI family E3160_25445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3160_25450 PF02678 Pirin E3160_25450 PF17954 Quercetinase C-terminal cupin domain E3160_25455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3160_25455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3160_25465 PF00583 Acetyltransferase (GNAT) family E3160_25485 PF10956 Protein of unknown function (DUF2756) E3160_25490 PF03009 Glycerophosphoryl diester phosphodiesterase family E3160_25495 PF00005 ABC transporter E3160_25495 PF17912 MalK OB fold domain E3160_25500 PF00528 Binding-protein-dependent transport system inner membrane component E3160_25505 PF00528 Binding-protein-dependent transport system inner membrane component E3160_25510 PF13416 Bacterial extracellular solute-binding protein E3160_25520 PF00005 ABC transporter E3160_25525 PF12399 Branched-chain amino acid ATP-binding cassette transporter E3160_25525 PF00005 ABC transporter E3160_25530 PF02653 Branched-chain amino acid transport system / permease component E3160_25530 PF11862 Domain of unknown function (DUF3382) E3160_25535 PF02653 Branched-chain amino acid transport system / permease component E3160_25540 PF13458 Periplasmic binding protein E3160_25545 PF12568 Acetyltransferase (GNAT) domain, PanZ E3160_25560 PF13458 Periplasmic binding protein E3160_25565 PF04542 Sigma-70 region 2 E3160_25565 PF04545 Sigma-70, region 4 E3160_25570 PF02687 FtsX-like permease family E3160_25570 PF18075 FtsX extracellular domain E3160_25575 PF00005 ABC transporter E3160_25580 PF02881 SRP54-type protein, helical bundle domain E3160_25580 PF00448 SRP54-type protein, GTPase domain E3160_25590 PF06611 Protein of unknown function (DUF1145) E3160_25595 PF10694 Protein of unknown function (DUF2500) E3160_25600 PF07947 YhhN family E3160_25605 PF00403 Heavy-metal-associated domain E3160_25610 PF01206 Sulfurtransferase TusA E3160_25615 PF02592 Putative vitamin uptake transporter E3160_25620 PF08786 DcrB E3160_25630 PF01594 AI-2E family transporter E3160_25640 PF00891 O-methyltransferase domain E3160_25650 PF01553 Acyltransferase E3160_25655 PF00550 Phosphopantetheine attachment site E3160_25660 PF00550 Phosphopantetheine attachment site E3160_25670 PF00668 Condensation domain E3160_25670 PF00550 Phosphopantetheine attachment site E3160_25670 PF13193 AMP-binding enzyme C-terminal domain E3160_25670 PF00501 AMP-binding enzyme E3160_25670 PF00975 Thioesterase domain E3160_25680 PF00535 Glycosyl transferase family 2 E3160_25705 PF00109 Beta-ketoacyl synthase, N-terminal domain E3160_25705 PF02801 Beta-ketoacyl synthase, C-terminal domain E3160_25720 PF02801 Beta-ketoacyl synthase, C-terminal domain E3160_25720 PF00109 Beta-ketoacyl synthase, N-terminal domain E3160_25725 PF01648 4'-phosphopantetheinyl transferase superfamily E3160_25730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_25735 PF00528 Binding-protein-dependent transport system inner membrane component E3160_25740 PF00528 Binding-protein-dependent transport system inner membrane component E3160_25745 PF00005 ABC transporter E3160_25750 PF00005 ABC transporter E3160_25755 PF08753 NikR C terminal nickel binding domain E3160_25755 PF01402 Ribbon-helix-helix protein, copG family E3160_25760 PF07702 UTRA domain E3160_25760 PF00392 Bacterial regulatory proteins, gntR family E3160_25770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_25775 PF03611 PTS system sugar-specific permease component E3160_25785 PF00381 PTS HPr component phosphorylation site E3160_25790 PF01116 Fructose-bisphosphate aldolase class-II E3160_25810 PF00005 ABC transporter E3160_25815 PF13533 Biotin-lipoyl like E3160_25820 PF13258 Domain of unknown function (DUF4049) E3160_25825 PF13258 Domain of unknown function (DUF4049) E3160_25830 PF10951 Protein of unknown function (DUF2776) E3160_25840 PF01384 Phosphate transporter family E3160_25845 PF10625 Universal stress protein B (UspB) E3160_25850 PF00582 Universal stress protein family E3160_25860 PF00854 POT family E3160_25865 PF04445 Putative SAM-dependent methyltransferase E3160_25870 PF01432 Peptidase family M3 E3160_25875 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E3160_25880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3160_25880 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3160_25890 PF01022 Bacterial regulatory protein, arsR family E3160_25895 PF02040 Arsenical pump membrane protein E3160_25900 PF03960 ArsC family E3160_25910 PF03843 Outer membrane lipoprotein Slp family E3160_25915 PF00196 Bacterial regulatory proteins, luxR family E3160_25920 PF05171 Haemin-degrading HemS.ChuX domain E3160_25925 PF00593 TonB dependent receptor E3160_25925 PF07715 TonB-dependent Receptor Plug Domain E3160_25935 PF01497 Periplasmic binding protein E3160_25940 PF04055 Radical SAM superfamily E3160_25945 PF06228 Haem utilisation ChuX/HutX E3160_25955 PF01032 FecCD transport family E3160_25960 PF00005 ABC transporter E3160_25965 PF02308 MgtC family E3160_25970 PF06411 HdeA/HdeB family E3160_25975 PF06411 HdeA/HdeB family E3160_25980 PF03729 Short repeat of unknown function (DUF308) E3160_25985 PF00196 Bacterial regulatory proteins, luxR family E3160_25995 PF00529 HlyD membrane-fusion protein of T1SS E3160_25995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_26000 PF00873 AcrB/AcrD/AcrF family E3160_26005 PF12833 Helix-turn-helix domain E3160_26010 PF12833 Helix-turn-helix domain E3160_26015 PF00282 Pyridoxal-dependent decarboxylase conserved domain E3160_26020 PF14376 Haem-binding domain E3160_26020 PF00034 Cytochrome c E3160_26020 PF03150 Di-haem cytochrome c peroxidase E3160_26025 PF01204 Trehalase E3160_26030 PF00196 Bacterial regulatory proteins, luxR family E3160_26035 PF03466 LysR substrate binding domain E3160_26035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_26040 PF03631 Virulence factor BrkB E3160_26045 PF00083 Sugar (and other) transporter E3160_26045 PF07690 Major Facilitator Superfamily E3160_26050 PF05170 AsmA family E3160_26055 PF00563 EAL domain E3160_26060 PF00294 pfkB family carbohydrate kinase E3160_26065 PF00675 Insulinase (Peptidase family M16) E3160_26065 PF05193 Peptidase M16 inactive domain E3160_26070 PF00375 Sodium:dicarboxylate symporter family E3160_26075 PF00990 Diguanylate cyclase, GGDEF domain E3160_26075 PF17154 Gammaproteobacterial periplasmic sensor domain E3160_26075 PF00672 HAMP domain E3160_26075 PF00563 EAL domain E3160_26080 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) E3160_26085 PF01270 Glycosyl hydrolases family 8 E3160_26090 PF03170 Bacterial cellulose synthase subunit E3160_26100 PF06564 Cellulose biosynthesis protein BcsQ E3160_26105 PF10945 Cellulose biosynthesis protein BcsR E3160_26110 PF10995 Cellulose biosynthesis GIL E3160_26115 PF11120 Cellulose biosynthesis protein BcsF E3160_26120 PF11658 Cellulose biosynthesis protein BcsG E3160_26125 PF13940 Toxin Ldr, type I toxin-antitoxin system E3160_26130 PF03222 Tryptophan/tyrosine permease family E3160_26135 PF00005 ABC transporter E3160_26135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_26140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3160_26140 PF00005 ABC transporter E3160_26145 PF00528 Binding-protein-dependent transport system inner membrane component E3160_26145 PF12911 N-terminal TM domain of oligopeptide transport permease C E3160_26150 PF00528 Binding-protein-dependent transport system inner membrane component E3160_26160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3160_26170 PF00884 Sulfatase E3160_26170 PF08019 Phosphoethanolamine transferase EptA/EptB E3160_26175 PF00419 Fimbrial protein E3160_26180 PF00419 Fimbrial protein E3160_26190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_26190 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_26195 PF00419 Fimbrial protein E3160_26200 PF07690 Major Facilitator Superfamily E3160_26205 PF03797 Autotransporter beta-domain E3160_26210 PF03352 Methyladenine glycosylase E3160_26215 PF00583 Acetyltransferase (GNAT) family E3160_26220 PF00384 Molybdopterin oxidoreductase E3160_26220 PF01568 Molydopterin dinucleotide binding domain E3160_26220 PF18364 Molybdopterin oxidoreductase N-terminal domain E3160_26225 PF00691 OmpA family E3160_26225 PF13488 Glycine zipper E3160_26230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3160_26230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3160_26235 PF11254 Protein of unknown function (DUF3053) E3160_26240 PF01381 Helix-turn-helix E3160_26245 PF00313 'Cold-shock' DNA-binding domain E3160_26250 PF01848 Hok/gef family E3160_26255 PF05746 DALR anticodon binding domain E3160_26255 PF02092 Glycyl-tRNA synthetase beta subunit E3160_26260 PF02091 Glycyl-tRNA synthetase alpha subunit E3160_26265 PF13983 YsaB-like lipoprotein E3160_26270 PF01757 Acyltransferase family E3160_26275 PF05360 yiaA/B two helix domain E3160_26280 PF05360 yiaA/B two helix domain E3160_26285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3160_26285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3160_26295 PF13407 Periplasmic binding protein domain E3160_26300 PF00005 ABC transporter E3160_26305 PF02653 Branched-chain amino acid transport system / permease component E3160_26310 PF12833 Helix-turn-helix domain E3160_26315 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E3160_26320 PF00128 Alpha amylase, catalytic domain E3160_26325 PF00155 Aminotransferase class I and II E3160_26330 PF13247 4Fe-4S dicluster domain E3160_26335 PF09339 IclR helix-turn-helix domain E3160_26335 PF01614 Bacterial transcriptional regulator E3160_26350 PF07944 Beta-L-arabinofuranosidase, GH127 E3160_26355 PF06629 MltA-interacting protein MipA E3160_26360 PF03466 LysR substrate binding domain E3160_26360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_26365 PF00529 HlyD membrane-fusion protein of T1SS E3160_26365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_26370 PF11742 Protein of unknown function (DUF3302) E3160_26380 PF00171 Aldehyde dehydrogenase family E3160_26390 PF00465 Iron-containing alcohol dehydrogenase E3160_26395 PF00009 Elongation factor Tu GTP binding domain E3160_26395 PF03144 Elongation factor Tu domain 2 E3160_26395 PF09106 Elongation factor SelB, winged helix E3160_26395 PF09107 Elongation factor SelB, winged helix E3160_26400 PF03841 L-seryl-tRNA selenium transferase E3160_26400 PF12390 Selenocysteine synthase N terminal E3160_26405 PF13417 Glutathione S-transferase, N-terminal domain E3160_26405 PF00043 Glutathione S-transferase, C-terminal domain E3160_26410 PF05593 RHS Repeat E3160_26410 PF03527 RHS protein E3160_26410 PF15606 Bacterial toxin 34 E3160_26430 PF15596 Immunity protein 57 E3160_26435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3160_26435 PF00529 HlyD membrane-fusion protein of T1SS E3160_26440 PF11742 Protein of unknown function (DUF3302) E3160_26445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3160_26445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3160_26445 PF02378 Phosphotransferase system, EIIC E3160_26450 PF08125 Mannitol dehydrogenase C-terminal domain E3160_26450 PF01232 Mannitol dehydrogenase Rossmann domain E3160_26455 PF05068 Mannitol repressor E3160_26465 PF10928 Protein of unknown function (DUF2810) E3160_26475 PF11622 Protein of unknown function (DUF3251) E3160_26480 PF05658 Head domain of trimeric autotransporter adhesin E3160_26480 PF03895 YadA-like membrane anchor domain E3160_26480 PF13018 Extended Signal Peptide of Type V secretion system E3160_26480 PF05662 Coiled stalk of trimeric autotransporter adhesin E3160_26485 PF02652 L-lactate permease E3160_26490 PF00392 Bacterial regulatory proteins, gntR family E3160_26490 PF07729 FCD domain E3160_26495 PF01070 FMN-dependent dehydrogenase E3160_26500 PF00588 SpoU rRNA Methylase family E3160_26505 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_26505 PF06426 Serine acetyltransferase, N-terminal E3160_26510 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E3160_26510 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E3160_26515 PF02556 Preprotein translocase subunit SecB E3160_26520 PF00462 Glutaredoxin E3160_26525 PF00581 Rhodanese-like domain E3160_26535 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E3160_26535 PF01676 Metalloenzyme superfamily E3160_26540 PF01551 Peptidase family M23 E3160_26545 PF04748 Divergent polysaccharide deacetylase E3160_26550 PF00535 Glycosyl transferase family 2 E3160_26555 PF08240 Alcohol dehydrogenase GroES-like domain E3160_26555 PF00107 Zinc-binding dehydrogenase E3160_26560 PF00155 Aminotransferase class I and II E3160_26565 PF09612 Bacterial protein of unknown function (HtrL_YibB) E3160_26570 PF01370 NAD dependent epimerase/dehydratase family E3160_26575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E3160_26580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E3160_26585 PF04932 O-Antigen ligase E3160_26590 PF00534 Glycosyl transferases group 1 E3160_26595 PF01501 Glycosyl transferase family 8 E3160_26595 PF08437 Glycosyl transferase family 8 C-terminal E3160_26600 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) E3160_26605 PF01501 Glycosyl transferase family 8 E3160_26605 PF08437 Glycosyl transferase family 8 C-terminal E3160_26615 PF13439 Glycosyltransferase Family 4 E3160_26615 PF00534 Glycosyl transferases group 1 E3160_26620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E3160_26625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E3160_26630 PF01467 Cytidylyltransferase-like E3160_26635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E3160_26635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E3160_26635 PF06827 Zinc finger found in FPG and IleRS E3160_26640 PF00471 Ribosomal protein L33 E3160_26645 PF00830 Ribosomal L28 family E3160_26650 PF04002 RadC-like JAB domain E3160_26655 PF04127 DNA / pantothenate metabolism flavoprotein E3160_26655 PF02441 Flavoprotein E3160_26660 PF00692 dUTPase E3160_26665 PF00440 Bacterial regulatory proteins, tetR family E3160_26670 PF00156 Phosphoribosyl transferase domain E3160_26675 PF03725 3' exoribonuclease family, domain 2 E3160_26675 PF01138 3' exoribonuclease family, domain 1 E3160_26680 PF03755 YicC-like family, N-terminal region E3160_26680 PF08340 Domain of unknown function (DUF1732) E3160_26700 PF05717 IS66 Orf2 like protein E3160_26705 PF13005 zinc-finger binding domain of transposase IS66 E3160_26705 PF13007 Transposase C of IS166 homeodomain E3160_26705 PF13817 IS66 C-terminal element E3160_26705 PF03050 Transposase IS66 family E3160_26710 PF03458 UPF0126 domain E3160_26715 PF01653 NAD-dependent DNA ligase adenylation domain E3160_26715 PF03120 NAD-dependent DNA ligase OB-fold domain E3160_26720 PF00625 Guanylate kinase E3160_26725 PF01192 RNA polymerase Rpb6 E3160_26730 PF02824 TGS domain E3160_26730 PF04607 Region found in RelA / SpoT proteins E3160_26730 PF13291 ACT domain E3160_26735 PF12105 SpoU, rRNA methylase, C-terminal E3160_26735 PF00588 SpoU rRNA Methylase family E3160_26740 PF00270 DEAD/DEAH box helicase E3160_26740 PF00271 Helicase conserved C-terminal domain E3160_26740 PF17191 RecG wedge domain E3160_26750 PF03616 Sodium/glutamate symporter E3160_26755 PF00860 Permease family E3160_26760 PF05170 AsmA family E3160_26765 PF01055 Glycosyl hydrolases family 31 E3160_26765 PF13802 Galactose mutarotase-like E3160_26780 PF00589 Phage integrase family E3160_26780 PF14659 Phage integrase, N-terminal SAM-like domain E3160_26780 PF13356 Arm DNA-binding domain E3160_26790 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E3160_26795 PF06755 CbtA_toxin of type IV toxin-antitoxin system E3160_26815 PF13592 Winged helix-turn helix E3160_26815 PF13358 DDE superfamily endonuclease E3160_26845 PF05802 Enterobacterial EspB protein E3160_26860 PF07201 HrpJ-like domain E3160_26870 PF02369 Bacterial Ig-like domain (group 1) E3160_26870 PF02368 Bacterial Ig-like domain (group 2) E3160_26870 PF11924 Inverse autotransporter, beta-domain E3160_26870 PF07979 Intimin C-type lectin domain E3160_26870 PF01476 LysM domain E3160_26875 PF05932 Tir chaperone protein (CesT) family E3160_26880 PF07490 Translocated intimin receptor (Tir) N-terminus E3160_26880 PF03549 Translocated intimin receptor (Tir) intimin-binding domain E3160_26880 PF07489 Translocated intimin receptor (Tir) C-terminus E3160_26915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3160_26915 PF18269 T3SS EscN ATPase C-terminal domain E3160_26920 PF00771 FHIPEP family E3160_26940 PF01514 Secretory protein of YscJ/FliF family E3160_26950 PF00263 Bacterial type II and III secretion system protein E3160_26950 PF03958 Bacterial type II/III secretion system short domain E3160_26970 PF01464 Transglycosylase SLT domain E3160_26975 PF01312 FlhB HrpN YscU SpaS Family E3160_26980 PF01311 Bacterial export proteins, family 1 E3160_26985 PF01313 Bacterial export proteins, family 3 E3160_26990 PF00813 FliP family E3160_27040 PF00892 EamA-like transporter family E3160_27045 PF03180 NLPA lipoprotein E3160_27055 PF07690 Major Facilitator Superfamily E3160_27075 PF06711 Protein of unknown function (DUF1198) E3160_27085 PF01979 Amidohydrolase family E3160_27085 PF13382 Adenine deaminase C-terminal domain E3160_27090 PF07690 Major Facilitator Superfamily E3160_27095 PF07690 Major Facilitator Superfamily E3160_27100 PF07730 Histidine kinase E3160_27100 PF05231 MASE1 E3160_27100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_27105 PF00072 Response regulator receiver domain E3160_27105 PF00196 Bacterial regulatory proteins, luxR family E3160_27125 PF01842 ACT domain E3160_27130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3160_27130 PF00205 Thiamine pyrophosphate enzyme, central domain E3160_27130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3160_27135 PF08049 IlvB leader peptide E3160_27140 PF13939 Toxin TisB, type I toxin-antitoxin system E3160_27145 PF07690 Major Facilitator Superfamily E3160_27155 PF02656 Domain of unknown function (DUF202) E3160_27160 PF02656 Domain of unknown function (DUF202) E3160_27170 PF00884 Sulfatase E3160_27170 PF16347 Domain of unknown function (DUF4976) E3160_27175 PF00474 Sodium:solute symporter family E3160_27180 PF02311 AraC-like ligand binding domain E3160_27180 PF12833 Helix-turn-helix domain E3160_27185 PF02056 Family 4 glycosyl hydrolase E3160_27185 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3160_27190 PF00367 phosphotransferase system, EIIB E3160_27190 PF02378 Phosphotransferase system, EIIC E3160_27195 PF07702 UTRA domain E3160_27195 PF00392 Bacterial regulatory proteins, gntR family E3160_27200 PF06826 Predicted Permease Membrane Region E3160_27200 PF02080 TrkA-C domain E3160_27205 PF00011 Hsp20/alpha crystallin family E3160_27210 PF00011 Hsp20/alpha crystallin family E3160_27215 PF07119 Protein of unknown function (DUF1375) E3160_27220 PF12566 Protein of unknown function (DUF3748) E3160_27220 PF07676 WD40-like Beta Propeller Repeat E3160_27225 PF01494 FAD binding domain E3160_27240 PF06078 Bacterial protein of unknown function (DUF937) E3160_27245 PF18053 DNA gyrase B subunit insert domain E3160_27245 PF01751 Toprim domain E3160_27245 PF00204 DNA gyrase B E3160_27245 PF00986 DNA gyrase B subunit, carboxyl terminus E3160_27245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3160_27250 PF02463 RecF/RecN/SMC N terminal domain E3160_27255 PF00712 DNA polymerase III beta subunit, N-terminal domain E3160_27255 PF02767 DNA polymerase III beta subunit, central domain E3160_27255 PF02768 DNA polymerase III beta subunit, C-terminal domain E3160_27260 PF08299 Bacterial dnaA protein helix-turn-helix E3160_27260 PF00308 Bacterial dnaA protein E3160_27260 PF11638 DnaA N-terminal domain E3160_27270 PF00468 Ribosomal protein L34 E3160_27275 PF00825 Ribonuclease P E3160_27280 PF01809 Putative membrane protein insertion efficiency factor E3160_27285 PF02096 60Kd inner membrane protein E3160_27285 PF14849 YidC periplasmic domain E3160_27290 PF10396 GTP-binding protein TrmE N-terminus E3160_27290 PF12631 MnmE helical domain E3160_27290 PF01926 50S ribosome-binding GTPase E3160_27305 PF08053 Tryptophanase operon leader peptide E3160_27310 PF01212 Beta-eliminating lyase E3160_27315 PF03222 Tryptophan/tyrosine permease family E3160_27320 PF07690 Major Facilitator Superfamily E3160_27325 PF03466 LysR substrate binding domain E3160_27325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3160_27335 PF03358 NADPH-dependent FMN reductase E3160_27340 PF00860 Permease family E3160_27345 PF13419 Haloacid dehalogenase-like hydrolase E3160_27395 PF01895 PhoU domain E3160_27400 PF00005 ABC transporter E3160_27405 PF00528 Binding-protein-dependent transport system inner membrane component E3160_27410 PF00528 Binding-protein-dependent transport system inner membrane component E3160_27415 PF12849 PBP superfamily domain E3160_27420 PF00419 Fimbrial protein E3160_27435 PF00419 Fimbrial protein E3160_27450 PF02753 Pili assembly chaperone PapD, C-terminal domain E3160_27450 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3160_27455 PF00419 Fimbrial protein E3160_27460 PF01380 SIS domain E3160_27465 PF00132 Bacterial transferase hexapeptide (six repeats) E3160_27465 PF12804 MobA-like NTP transferase domain E3160_27465 PF14602 Hexapeptide repeat of succinyl-transferase E3160_27470 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E3160_27470 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E3160_27475 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3160_27475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3160_27480 PF00231 ATP synthase E3160_27485 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3160_27485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3160_27485 PF00306 ATP synthase alpha/beta chain, C terminal domain E3160_27490 PF00213 ATP synthase delta (OSCP) subunit E3160_27495 PF00430 ATP synthase B/B' CF(0) E3160_27500 PF00137 ATP synthase subunit C E3160_27505 PF00119 ATP synthase A chain E3160_27510 PF03899 ATP synthase I chain E3160_27515 PF02527 rRNA small subunit methyltransferase G E3160_27520 PF01134 Glucose inhibited division protein A E3160_27520 PF13932 GidA associated domain E3160_27545 PF03279 Bacterial lipid A biosynthesis acyltransferase E3160_27550 PF00884 Sulfatase E3160_27555 PF13439 Glycosyltransferase Family 4 E3160_27555 PF00534 Glycosyl transferases group 1 E3160_27560 PF01522 Polysaccharide deacetylase E3160_27585 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E3160_27585 PF01367 5'-3' exonuclease, C-terminal SAM fold E3160_27590 PF01695 IstB-like ATP binding protein E3160_27605 PF03050 Transposase IS66 family E3160_27605 PF13817 IS66 C-terminal element E3160_27605 PF13007 Transposase C of IS166 homeodomain E3160_27605 PF13005 zinc-finger binding domain of transposase IS66 E3160_27610 PF05717 IS66 Orf2 like protein E3160_27630 PF02387 IncFII RepA protein family E3160_27635 PF08048 Tap RepA1 leader peptide E3160_27645 PF10723 Replication regulatory protein RepB E3160_27660 PF05321 Haemolysin expression modulating protein E3160_27665 PF00565 Staphylococcal nuclease homologue E3160_27675 PF04352 ProQ/FINO family E3160_27675 PF12602 Fertility inhibition protein N terminal E3160_27680 PF00561 alpha/beta hydrolase fold E3160_27685 PF05857 TraX protein E3160_27750 PF01527 Transposase E3160_27760 PF03743 Bacterial conjugation TrbI-like protein E3160_27765 PF06586 TraK protein E3160_27770 PF05309 TraE protein E3160_27775 PF07178 TraL protein E3160_27780 PF05513 TraA E3160_27785 PF05509 TraY domain E3160_27795 PF05261 TraM protein, DNA-binding E3160_27800 PF01464 Transglycosylase SLT domain E3160_27805 PF06067 Domain of unknown function (DUF932) E3160_27830 PF01848 Hok/gef family E3160_27835 PF06952 PsiA protein E3160_27840 PF06290 Plasmid SOS inhibition protein (PsiB) E3160_27845 PF02195 ParB-like nuclease domain E3160_27850 PF06006 Bacterial protein of unknown function (DUF905) E3160_27855 PF00436 Single-strand binding protein family E3160_27900 PF07128 Protein of unknown function (DUF1380) E3160_27905 PF03230 Antirestriction protein E3160_27910 PF07339 Protein of unknown function (DUF1472) E3160_27920 PF07128 Protein of unknown function (DUF1380) E3160_27930 PF01555 DNA methylase E3160_27940 PF06924 Protein of unknown function (DUF1281) E3160_27955 PF18090 Centromere-binding protein HTH domain E3160_27955 PF02195 ParB-like nuclease domain E3160_27960 PF13614 AAA domain E3160_27975 PF01051 Initiator Replication protein E3160_27980 PF00589 Phage integrase family E3160_28000 PF01047 MarR family E3160_28015 PF00664 ABC transporter transmembrane region E3160_28015 PF03412 Peptidase C39 family E3160_28015 PF00005 ABC transporter E3160_28020 PF02382 N-terminal domain in RTX protein E3160_28020 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) E3160_28020 PF08339 RTX C-terminal domain E3160_28025 PF02794 RTX toxin acyltransferase family E3160_28045 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) E3160_28050 PF06750 Bacterial Peptidase A24 N-terminal domain E3160_28050 PF01478 Type IV leader peptidase family E3160_28055 PF04612 Type II secretion system (T2SS), protein M E3160_28060 PF05134 Type II secretion system (T2SS), protein L E3160_28060 PF12693 GspL periplasmic domain E3160_28065 PF03934 Type II secretion system (T2SS), protein K E3160_28070 PF11612 Type II secretion system (T2SS), protein J E3160_28070 PF07963 Prokaryotic N-terminal methylation motif E3160_28075 PF02501 Type II secretion system (T2SS), protein I E3160_28075 PF07963 Prokaryotic N-terminal methylation motif E3160_28080 PF07963 Prokaryotic N-terminal methylation motif E3160_28085 PF08334 Type II secretion system (T2SS), protein G E3160_28085 PF07963 Prokaryotic N-terminal methylation motif E3160_28090 PF00482 Type II secretion system (T2SS), protein F E3160_28100 PF00263 Bacterial type II and III secretion system protein E3160_28100 PF03958 Bacterial type II/III secretion system short domain E3160_28105 PF11356 Type II secretion system protein C