locus-tag class description ILQ33_00005 PF01134 Glucose inhibited division protein A ILQ33_00005 PF13932 GidA associated domain ILQ33_00010 PF02527 rRNA small subunit methyltransferase G ILQ33_00015 PF03899 ATP synthase I chain ILQ33_00020 PF00119 ATP synthase A chain ILQ33_00025 PF00137 ATP synthase subunit C ILQ33_00030 PF00430 ATP synthase B/B' CF(0) ILQ33_00035 PF00213 ATP synthase delta (OSCP) subunit ILQ33_00040 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILQ33_00040 PF00306 ATP synthase alpha/beta chain, C terminal domain ILQ33_00040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ33_00045 PF00231 ATP synthase ILQ33_00050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ33_00050 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILQ33_00055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ILQ33_00055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ILQ33_00060 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_00060 PF12804 MobA-like NTP transferase domain ILQ33_00060 PF14602 Hexapeptide repeat of succinyl-transferase ILQ33_00065 PF01380 SIS domain ILQ33_00070 PF00419 Fimbrial protein ILQ33_00075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_00075 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_00085 PF13953 PapC C-terminal domain ILQ33_00085 PF13954 PapC N-terminal domain ILQ33_00085 PF00577 Outer membrane usher protein ILQ33_00090 PF00419 Fimbrial protein ILQ33_00095 PF00419 Fimbrial protein ILQ33_00100 PF12849 PBP superfamily domain ILQ33_00105 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_00110 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_00115 PF00005 ABC transporter ILQ33_00120 PF01895 PhoU domain ILQ33_00145 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_00150 PF00860 Permease family ILQ33_00155 PF03358 NADPH-dependent FMN reductase ILQ33_00165 PF03466 LysR substrate binding domain ILQ33_00165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_00170 PF07690 Major Facilitator Superfamily ILQ33_00175 PF03222 Tryptophan/tyrosine permease family ILQ33_00180 PF01212 Beta-eliminating lyase ILQ33_00185 PF08053 Tryptophanase operon leader peptide ILQ33_00195 PF12631 MnmE helical domain ILQ33_00195 PF10396 GTP-binding protein TrmE N-terminus ILQ33_00195 PF01926 50S ribosome-binding GTPase ILQ33_00200 PF02096 60Kd inner membrane protein ILQ33_00200 PF14849 YidC periplasmic domain ILQ33_00205 PF01809 Putative membrane protein insertion efficiency factor ILQ33_00210 PF00825 Ribonuclease P ILQ33_00215 PF00468 Ribosomal protein L34 ILQ33_00225 PF08299 Bacterial dnaA protein helix-turn-helix ILQ33_00225 PF11638 DnaA N-terminal domain ILQ33_00225 PF00308 Bacterial dnaA protein ILQ33_00230 PF02768 DNA polymerase III beta subunit, C-terminal domain ILQ33_00230 PF02767 DNA polymerase III beta subunit, central domain ILQ33_00230 PF00712 DNA polymerase III beta subunit, N-terminal domain ILQ33_00235 PF02463 RecF/RecN/SMC N terminal domain ILQ33_00240 PF01751 Toprim domain ILQ33_00240 PF00204 DNA gyrase B ILQ33_00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_00240 PF18053 DNA gyrase B subunit insert domain ILQ33_00240 PF00986 DNA gyrase B subunit, carboxyl terminus ILQ33_00245 PF06078 Bacterial protein of unknown function (DUF937) ILQ33_00260 PF01494 FAD binding domain ILQ33_00265 PF12566 Protein of unknown function (DUF3748) ILQ33_00265 PF07676 WD40-like Beta Propeller Repeat ILQ33_00270 PF07119 Protein of unknown function (DUF1375) ILQ33_00275 PF00011 Hsp20/alpha crystallin family ILQ33_00280 PF00011 Hsp20/alpha crystallin family ILQ33_00285 PF02080 TrkA-C domain ILQ33_00285 PF06826 Predicted Permease Membrane Region ILQ33_00290 PF07702 UTRA domain ILQ33_00290 PF00392 Bacterial regulatory proteins, gntR family ILQ33_00295 PF00367 phosphotransferase system, EIIB ILQ33_00295 PF02378 Phosphotransferase system, EIIC ILQ33_00300 PF11975 Family 4 glycosyl hydrolase C-terminal domain ILQ33_00300 PF02056 Family 4 glycosyl hydrolase ILQ33_00305 PF02311 AraC-like ligand binding domain ILQ33_00305 PF12833 Helix-turn-helix domain ILQ33_00310 PF00474 Sodium:solute symporter family ILQ33_00315 PF00884 Sulfatase ILQ33_00315 PF16347 Domain of unknown function (DUF4976) ILQ33_00325 PF02656 Domain of unknown function (DUF202) ILQ33_00330 PF02656 Domain of unknown function (DUF202) ILQ33_00340 PF07690 Major Facilitator Superfamily ILQ33_00345 PF13939 Toxin TisB, type I toxin-antitoxin system ILQ33_00350 PF08049 IlvB leader peptide ILQ33_00355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_00355 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ33_00355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ33_00360 PF01842 ACT domain ILQ33_00380 PF00072 Response regulator receiver domain ILQ33_00380 PF00196 Bacterial regulatory proteins, luxR family ILQ33_00385 PF07730 Histidine kinase ILQ33_00385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_00385 PF05231 MASE1 ILQ33_00390 PF07690 Major Facilitator Superfamily ILQ33_00395 PF07690 Major Facilitator Superfamily ILQ33_00400 PF13382 Adenine deaminase C-terminal domain ILQ33_00400 PF01979 Amidohydrolase family ILQ33_00410 PF06711 Protein of unknown function (DUF1198) ILQ33_00425 PF07690 Major Facilitator Superfamily ILQ33_00435 PF03180 NLPA lipoprotein ILQ33_00440 PF00892 EamA-like transporter family ILQ33_00445 PF07690 Major Facilitator Superfamily ILQ33_00495 PF00813 FliP family ILQ33_00500 PF01313 Bacterial export proteins, family 3 ILQ33_00505 PF01311 Bacterial export proteins, family 1 ILQ33_00510 PF01312 FlhB HrpN YscU SpaS Family ILQ33_00515 PF01464 Transglycosylase SLT domain ILQ33_00535 PF00263 Bacterial type II and III secretion system protein ILQ33_00535 PF03958 Bacterial type II/III secretion system short domain ILQ33_00545 PF01514 Secretory protein of YscJ/FliF family ILQ33_00565 PF00771 FHIPEP family ILQ33_00570 PF18269 T3SS EscN ATPase C-terminal domain ILQ33_00570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ33_00605 PF07489 Translocated intimin receptor (Tir) C-terminus ILQ33_00605 PF07490 Translocated intimin receptor (Tir) N-terminus ILQ33_00605 PF03549 Translocated intimin receptor (Tir) intimin-binding domain ILQ33_00610 PF05932 Tir chaperone protein (CesT) family ILQ33_00615 PF07979 Intimin C-type lectin domain ILQ33_00615 PF02369 Bacterial Ig-like domain (group 1) ILQ33_00615 PF02368 Bacterial Ig-like domain (group 2) ILQ33_00615 PF11924 Inverse autotransporter, beta-domain ILQ33_00615 PF01476 LysM domain ILQ33_00625 PF07201 HrpJ-like domain ILQ33_00640 PF05802 Enterobacterial EspB protein ILQ33_00670 PF13817 IS66 C-terminal element ILQ33_00670 PF13007 Transposase C of IS166 homeodomain ILQ33_00670 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_00670 PF03050 Transposase IS66 family ILQ33_00675 PF05717 IS66 Orf2 like protein ILQ33_00690 PF17345 Family of unknown function (DUF5375) ILQ33_00740 PF00589 Phage integrase family ILQ33_00740 PF14659 Phage integrase, N-terminal SAM-like domain ILQ33_00740 PF13356 Arm DNA-binding domain ILQ33_00755 PF01055 Glycosyl hydrolases family 31 ILQ33_00755 PF13802 Galactose mutarotase-like ILQ33_00760 PF05170 AsmA family ILQ33_00765 PF00860 Permease family ILQ33_00770 PF03616 Sodium/glutamate symporter ILQ33_00780 PF00270 DEAD/DEAH box helicase ILQ33_00780 PF00271 Helicase conserved C-terminal domain ILQ33_00780 PF17191 RecG wedge domain ILQ33_00785 PF00588 SpoU rRNA Methylase family ILQ33_00785 PF12105 SpoU, rRNA methylase, C-terminal ILQ33_00790 PF04607 Region found in RelA / SpoT proteins ILQ33_00790 PF13291 ACT domain ILQ33_00790 PF02824 TGS domain ILQ33_00795 PF01192 RNA polymerase Rpb6 ILQ33_00800 PF00625 Guanylate kinase ILQ33_00805 PF01653 NAD-dependent DNA ligase adenylation domain ILQ33_00805 PF03120 NAD-dependent DNA ligase OB-fold domain ILQ33_00810 PF03458 UPF0126 domain ILQ33_00820 PF03755 YicC-like family, N-terminal region ILQ33_00820 PF08340 Domain of unknown function (DUF1732) ILQ33_00825 PF01138 3' exoribonuclease family, domain 1 ILQ33_00825 PF03725 3' exoribonuclease family, domain 2 ILQ33_00830 PF00156 Phosphoribosyl transferase domain ILQ33_00835 PF00440 Bacterial regulatory proteins, tetR family ILQ33_00840 PF00692 dUTPase ILQ33_00845 PF04127 DNA / pantothenate metabolism flavoprotein ILQ33_00845 PF02441 Flavoprotein ILQ33_00850 PF04002 RadC-like JAB domain ILQ33_00855 PF00830 Ribosomal L28 family ILQ33_00860 PF00471 Ribosomal protein L33 ILQ33_00865 PF06827 Zinc finger found in FPG and IleRS ILQ33_00865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ILQ33_00865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ILQ33_00870 PF01467 Cytidylyltransferase-like ILQ33_00875 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ILQ33_00880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ILQ33_00885 PF13439 Glycosyltransferase Family 4 ILQ33_00885 PF00534 Glycosyl transferases group 1 ILQ33_00895 PF01501 Glycosyl transferase family 8 ILQ33_00895 PF08437 Glycosyl transferase family 8 C-terminal ILQ33_00900 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) ILQ33_00905 PF01501 Glycosyl transferase family 8 ILQ33_00905 PF08437 Glycosyl transferase family 8 C-terminal ILQ33_00910 PF00534 Glycosyl transferases group 1 ILQ33_00915 PF04932 O-Antigen ligase ILQ33_00920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ILQ33_00925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ILQ33_00930 PF01370 NAD dependent epimerase/dehydratase family ILQ33_00935 PF09612 Bacterial protein of unknown function (HtrL_YibB) ILQ33_00940 PF00155 Aminotransferase class I and II ILQ33_00945 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_00945 PF00107 Zinc-binding dehydrogenase ILQ33_00950 PF00535 Glycosyl transferase family 2 ILQ33_00955 PF04748 Divergent polysaccharide deacetylase ILQ33_00960 PF01551 Peptidase family M23 ILQ33_00965 PF01676 Metalloenzyme superfamily ILQ33_00965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ILQ33_00970 PF00581 Rhodanese-like domain ILQ33_00975 PF00462 Glutaredoxin ILQ33_00980 PF02556 Preprotein translocase subunit SecB ILQ33_00985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ILQ33_00985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ILQ33_00990 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_00990 PF06426 Serine acetyltransferase, N-terminal ILQ33_00995 PF00588 SpoU rRNA Methylase family ILQ33_01000 PF01070 FMN-dependent dehydrogenase ILQ33_01005 PF07729 FCD domain ILQ33_01005 PF00392 Bacterial regulatory proteins, gntR family ILQ33_01010 PF02652 L-lactate permease ILQ33_01015 PF05658 Head domain of trimeric autotransporter adhesin ILQ33_01015 PF03895 YadA-like membrane anchor domain ILQ33_01015 PF05662 Coiled stalk of trimeric autotransporter adhesin ILQ33_01015 PF13018 Extended Signal Peptide of Type V secretion system ILQ33_01020 PF11622 Protein of unknown function (DUF3251) ILQ33_01025 PF10928 Protein of unknown function (DUF2810) ILQ33_01035 PF05068 Mannitol repressor ILQ33_01040 PF01232 Mannitol dehydrogenase Rossmann domain ILQ33_01040 PF08125 Mannitol dehydrogenase C-terminal domain ILQ33_01045 PF02378 Phosphotransferase system, EIIC ILQ33_01045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_01045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_01050 PF11742 Protein of unknown function (DUF3302) ILQ33_01055 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_01055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_01060 PF15596 Immunity protein 57 ILQ33_01070 PF03527 RHS protein ILQ33_01070 PF15606 Bacterial toxin 34 ILQ33_01070 PF05593 RHS Repeat ILQ33_01075 PF00043 Glutathione S-transferase, C-terminal domain ILQ33_01075 PF13417 Glutathione S-transferase, N-terminal domain ILQ33_01080 PF03841 L-seryl-tRNA selenium transferase ILQ33_01080 PF12390 Selenocysteine synthase N terminal ILQ33_01085 PF00009 Elongation factor Tu GTP binding domain ILQ33_01085 PF09106 Elongation factor SelB, winged helix ILQ33_01085 PF03144 Elongation factor Tu domain 2 ILQ33_01085 PF09107 Elongation factor SelB, winged helix ILQ33_01090 PF00465 Iron-containing alcohol dehydrogenase ILQ33_01100 PF00171 Aldehyde dehydrogenase family ILQ33_01105 PF11742 Protein of unknown function (DUF3302) ILQ33_01110 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_01110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_01115 PF03466 LysR substrate binding domain ILQ33_01120 PF06629 MltA-interacting protein MipA ILQ33_01125 PF07944 Beta-L-arabinofuranosidase, GH127 ILQ33_01140 PF09339 IclR helix-turn-helix domain ILQ33_01140 PF01614 Bacterial transcriptional regulator ILQ33_01145 PF13247 4Fe-4S dicluster domain ILQ33_01150 PF00155 Aminotransferase class I and II ILQ33_01155 PF00128 Alpha amylase, catalytic domain ILQ33_01160 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ILQ33_01165 PF12833 Helix-turn-helix domain ILQ33_01170 PF02653 Branched-chain amino acid transport system / permease component ILQ33_01175 PF00005 ABC transporter ILQ33_01180 PF13407 Periplasmic binding protein domain ILQ33_01190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ33_01190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ33_01195 PF05360 yiaA/B two helix domain ILQ33_01200 PF05360 yiaA/B two helix domain ILQ33_01205 PF01757 Acyltransferase family ILQ33_01210 PF13983 YsaB-like lipoprotein ILQ33_01215 PF02091 Glycyl-tRNA synthetase alpha subunit ILQ33_01220 PF05746 DALR anticodon binding domain ILQ33_01220 PF02092 Glycyl-tRNA synthetase beta subunit ILQ33_01225 PF01848 Hok/gef family ILQ33_01230 PF00313 'Cold-shock' DNA-binding domain ILQ33_01235 PF01381 Helix-turn-helix ILQ33_01240 PF11254 Protein of unknown function (DUF3053) ILQ33_01245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ33_01245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ33_01250 PF13488 Glycine zipper ILQ33_01250 PF00691 OmpA family ILQ33_01255 PF01568 Molydopterin dinucleotide binding domain ILQ33_01255 PF18364 Molybdopterin oxidoreductase N-terminal domain ILQ33_01255 PF00384 Molybdopterin oxidoreductase ILQ33_01260 PF00583 Acetyltransferase (GNAT) family ILQ33_01265 PF03352 Methyladenine glycosylase ILQ33_01270 PF03797 Autotransporter beta-domain ILQ33_01275 PF07690 Major Facilitator Superfamily ILQ33_01280 PF00419 Fimbrial protein ILQ33_01285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_01285 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_01295 PF00419 Fimbrial protein ILQ33_01300 PF00419 Fimbrial protein ILQ33_01305 PF00884 Sulfatase ILQ33_01305 PF08019 Phosphoethanolamine transferase EptA/EptB ILQ33_01315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_01320 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_01325 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ33_01325 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_01330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_01330 PF00005 ABC transporter ILQ33_01335 PF00005 ABC transporter ILQ33_01335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_01340 PF03222 Tryptophan/tyrosine permease family ILQ33_01345 PF13940 Toxin Ldr, type I toxin-antitoxin system ILQ33_01350 PF11658 Cellulose biosynthesis protein BcsG ILQ33_01355 PF11120 Cellulose biosynthesis protein BcsF ILQ33_01360 PF10995 Cellulose biosynthesis GIL ILQ33_01365 PF10945 Cellulose biosynthesis protein BcsR ILQ33_01370 PF06564 Cellulose biosynthesis protein BcsQ ILQ33_01375 PF06564 Cellulose biosynthesis protein BcsQ ILQ33_01380 PF00535 Glycosyl transferase family 2 ILQ33_01380 PF07238 PilZ domain ILQ33_01385 PF03170 Bacterial cellulose synthase subunit ILQ33_01390 PF01270 Glycosyl hydrolases family 8 ILQ33_01395 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ILQ33_01400 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_01400 PF00563 EAL domain ILQ33_01400 PF00672 HAMP domain ILQ33_01400 PF17154 Gammaproteobacterial periplasmic sensor domain ILQ33_01405 PF00375 Sodium:dicarboxylate symporter family ILQ33_01410 PF05193 Peptidase M16 inactive domain ILQ33_01410 PF00675 Insulinase (Peptidase family M16) ILQ33_01415 PF00294 pfkB family carbohydrate kinase ILQ33_01420 PF00563 EAL domain ILQ33_01425 PF05170 AsmA family ILQ33_01430 PF07690 Major Facilitator Superfamily ILQ33_01430 PF00083 Sugar (and other) transporter ILQ33_01435 PF03631 Virulence factor BrkB ILQ33_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_01440 PF03466 LysR substrate binding domain ILQ33_01445 PF00196 Bacterial regulatory proteins, luxR family ILQ33_01450 PF01204 Trehalase ILQ33_01455 PF14376 Haem-binding domain ILQ33_01455 PF03150 Di-haem cytochrome c peroxidase ILQ33_01455 PF00034 Cytochrome c ILQ33_01460 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILQ33_01465 PF12833 Helix-turn-helix domain ILQ33_01470 PF12833 Helix-turn-helix domain ILQ33_01475 PF00873 AcrB/AcrD/AcrF family ILQ33_01480 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_01490 PF00196 Bacterial regulatory proteins, luxR family ILQ33_01495 PF03729 Short repeat of unknown function (DUF308) ILQ33_01500 PF06411 HdeA/HdeB family ILQ33_01505 PF06411 HdeA/HdeB family ILQ33_01510 PF02308 MgtC family ILQ33_01515 PF00005 ABC transporter ILQ33_01520 PF01032 FecCD transport family ILQ33_01530 PF06228 Haem utilisation ChuX/HutX ILQ33_01535 PF04055 Radical SAM superfamily ILQ33_01540 PF01497 Periplasmic binding protein ILQ33_01545 PF00593 TonB dependent receptor ILQ33_01545 PF07715 TonB-dependent Receptor Plug Domain ILQ33_01550 PF05171 Haemin-degrading HemS.ChuX domain ILQ33_01555 PF00196 Bacterial regulatory proteins, luxR family ILQ33_01560 PF03843 Outer membrane lipoprotein Slp family ILQ33_01570 PF03960 ArsC family ILQ33_01575 PF02040 Arsenical pump membrane protein ILQ33_01580 PF01022 Bacterial regulatory protein, arsR family ILQ33_01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_01590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ33_01595 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ILQ33_01600 PF01432 Peptidase family M3 ILQ33_01605 PF04445 Putative SAM-dependent methyltransferase ILQ33_01610 PF00854 POT family ILQ33_01615 PF00582 Universal stress protein family ILQ33_01620 PF10625 Universal stress protein B (UspB) ILQ33_01625 PF01384 Phosphate transporter family ILQ33_01635 PF10951 Protein of unknown function (DUF2776) ILQ33_01640 PF13258 Domain of unknown function (DUF4049) ILQ33_01645 PF13258 Domain of unknown function (DUF4049) ILQ33_01650 PF13533 Biotin-lipoyl like ILQ33_01655 PF00005 ABC transporter ILQ33_01675 PF01116 Fructose-bisphosphate aldolase class-II ILQ33_01680 PF00381 PTS HPr component phosphorylation site ILQ33_01690 PF03611 PTS system sugar-specific permease component ILQ33_01695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_01705 PF00392 Bacterial regulatory proteins, gntR family ILQ33_01705 PF07702 UTRA domain ILQ33_01710 PF08753 NikR C terminal nickel binding domain ILQ33_01710 PF01402 Ribbon-helix-helix protein, copG family ILQ33_01715 PF00005 ABC transporter ILQ33_01720 PF00005 ABC transporter ILQ33_01725 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_01730 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_01735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_01740 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ33_01745 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ33_01745 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ33_01760 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ33_01760 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ33_01785 PF00535 Glycosyl transferase family 2 ILQ33_01795 PF00668 Condensation domain ILQ33_01795 PF00501 AMP-binding enzyme ILQ33_01795 PF00975 Thioesterase domain ILQ33_01795 PF13193 AMP-binding enzyme C-terminal domain ILQ33_01795 PF00550 Phosphopantetheine attachment site ILQ33_01805 PF00550 Phosphopantetheine attachment site ILQ33_01810 PF00550 Phosphopantetheine attachment site ILQ33_01815 PF01553 Acyltransferase ILQ33_01825 PF00891 O-methyltransferase domain ILQ33_01835 PF01594 AI-2E family transporter ILQ33_01840 PF07690 Major Facilitator Superfamily ILQ33_01845 PF08786 DcrB ILQ33_01850 PF02592 Putative vitamin uptake transporter ILQ33_01855 PF01206 Sulfurtransferase TusA ILQ33_01860 PF00403 Heavy-metal-associated domain ILQ33_01865 PF07947 YhhN family ILQ33_01870 PF10694 Protein of unknown function (DUF2500) ILQ33_01875 PF06611 Protein of unknown function (DUF1145) ILQ33_01885 PF00448 SRP54-type protein, GTPase domain ILQ33_01885 PF02881 SRP54-type protein, helical bundle domain ILQ33_01890 PF00005 ABC transporter ILQ33_01895 PF18075 FtsX extracellular domain ILQ33_01895 PF02687 FtsX-like permease family ILQ33_01900 PF04542 Sigma-70 region 2 ILQ33_01900 PF04545 Sigma-70, region 4 ILQ33_01905 PF13458 Periplasmic binding protein ILQ33_01920 PF12568 Acetyltransferase (GNAT) domain, PanZ ILQ33_01925 PF13458 Periplasmic binding protein ILQ33_01930 PF02653 Branched-chain amino acid transport system / permease component ILQ33_01935 PF02653 Branched-chain amino acid transport system / permease component ILQ33_01935 PF11862 Domain of unknown function (DUF3382) ILQ33_01940 PF12399 Branched-chain amino acid ATP-binding cassette transporter ILQ33_01940 PF00005 ABC transporter ILQ33_01945 PF00005 ABC transporter ILQ33_01955 PF13416 Bacterial extracellular solute-binding protein ILQ33_01960 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_01965 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_01970 PF00005 ABC transporter ILQ33_01970 PF17912 MalK OB fold domain ILQ33_01975 PF03009 Glycerophosphoryl diester phosphodiesterase family ILQ33_01980 PF10956 Protein of unknown function (DUF2756) ILQ33_01995 PF00583 Acetyltransferase (GNAT) family ILQ33_02000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ILQ33_02000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ33_02005 PF02678 Pirin ILQ33_02005 PF17954 Quercetinase C-terminal cupin domain ILQ33_02010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ33_02010 PF00356 Bacterial regulatory proteins, lacI family ILQ33_02015 PF01202 Shikimate kinase ILQ33_02020 PF02447 GntP family permease ILQ33_02025 PF00271 Helicase conserved C-terminal domain ILQ33_02025 PF09382 RQC domain ILQ33_02025 PF16124 RecQ zinc-binding ILQ33_02025 PF00570 HRDC domain ILQ33_02025 PF00270 DEAD/DEAH box helicase ILQ33_02030 PF09382 RQC domain ILQ33_02030 PF16124 RecQ zinc-binding ILQ33_02030 PF00570 HRDC domain ILQ33_02030 PF00270 DEAD/DEAH box helicase ILQ33_02030 PF00271 Helicase conserved C-terminal domain ILQ33_02045 PF01914 MarC family integral membrane protein ILQ33_02050 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ33_02050 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILQ33_02055 PF02806 Alpha amylase, C-terminal all-beta domain ILQ33_02055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ILQ33_02055 PF00128 Alpha amylase, catalytic domain ILQ33_02060 PF00128 Alpha amylase, catalytic domain ILQ33_02060 PF18390 Glycogen debranching enzyme C-terminal domain ILQ33_02060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ILQ33_02065 PF00483 Nucleotidyl transferase ILQ33_02070 PF08323 Starch synthase catalytic domain ILQ33_02070 PF00534 Glycosyl transferases group 1 ILQ33_02075 PF00343 Carbohydrate phosphorylase ILQ33_02095 PF01266 FAD dependent oxidoreductase ILQ33_02095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ILQ33_02100 PF00581 Rhodanese-like domain ILQ33_02105 PF01694 Rhomboid family ILQ33_02105 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ILQ33_02110 PF08220 DeoR-like helix-turn-helix domain ILQ33_02110 PF00455 DeoR C terminal sensor domain ILQ33_02115 PF06956 Regulator of RNA terminal phosphate cyclase ILQ33_02115 PF00158 Sigma-54 interaction domain ILQ33_02120 PF01139 tRNA-splicing ligase RtcB ILQ33_02125 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain ILQ33_02125 PF01137 RNA 3'-terminal phosphate cyclase ILQ33_02140 PF17874 MalT-like TPR region ILQ33_02140 PF00196 Bacterial regulatory proteins, luxR family ILQ33_02145 PF00343 Carbohydrate phosphorylase ILQ33_02150 PF02446 4-alpha-glucanotransferase ILQ33_02155 PF02447 GntP family permease ILQ33_02160 PF01106 NifU-like domain ILQ33_02160 PF01521 Iron-sulphur cluster biosynthesis ILQ33_02165 PF00156 Phosphoribosyl transferase domain ILQ33_02170 PF00561 alpha/beta hydrolase fold ILQ33_02175 PF04754 Putative transposase, YhgA-like ILQ33_02180 PF09012 FeoC like transcriptional regulator ILQ33_02185 PF02421 Ferrous iron transport protein B ILQ33_02185 PF17910 FeoB cytosolic helical domain ILQ33_02185 PF07664 Ferrous iron transport protein B C terminus ILQ33_02185 PF07670 Nucleoside recognition ILQ33_02190 PF04023 FeoA domain ILQ33_02195 PF17674 HHH domain ILQ33_02195 PF16921 Tex protein YqgF-like domain ILQ33_02195 PF00575 S1 RNA binding domain ILQ33_02195 PF09371 Tex-like protein N-terminal domain ILQ33_02200 PF03449 Transcription elongation factor, N-terminal ILQ33_02200 PF01272 Transcription elongation factor, GreA/GreB, C-term ILQ33_02205 PF00486 Transcriptional regulatory protein, C terminal ILQ33_02205 PF00072 Response regulator receiver domain ILQ33_02210 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_02210 PF00672 HAMP domain ILQ33_02215 PF01293 Phosphoenolpyruvate carboxykinase ILQ33_02220 PF13687 Domain of unknown function (DUF4153) ILQ33_02225 PF01430 Hsp33 protein ILQ33_02230 PF01479 S4 domain ILQ33_02235 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_02240 PF07095 Intracellular growth attenuator protein IgaA ILQ33_02245 PF00293 NUDIX domain ILQ33_02250 PF00905 Penicillin binding protein transpeptidase domain ILQ33_02250 PF00912 Transglycosylase ILQ33_02250 PF17092 Penicillin-binding protein OB-like domain ILQ33_02260 PF05137 Fimbrial assembly protein (PilN) ILQ33_02270 PF10748 DNA utilization proteins HofP ILQ33_02275 PF03958 Bacterial type II/III secretion system short domain ILQ33_02275 PF00263 Bacterial type II and III secretion system protein ILQ33_02280 PF01202 Shikimate kinase ILQ33_02285 PF01761 3-dehydroquinate synthase ILQ33_02290 PF05036 Sporulation related domain ILQ33_02295 PF02086 D12 class N6 adenine-specific DNA methyltransferase ILQ33_02300 PF00834 Ribulose-phosphate 3 epimerase family ILQ33_02305 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_02310 PF00579 tRNA synthetases class I (W and Y) ILQ33_02315 PF00392 Bacterial regulatory proteins, gntR family ILQ33_02315 PF07702 UTRA domain ILQ33_02325 PF01261 Xylose isomerase-like TIM barrel ILQ33_02330 PF01380 SIS domain ILQ33_02335 PF13520 Amino acid permease ILQ33_02340 PF13978 Protein of unknown function (DUF4223) ILQ33_02345 PF10414 Sirohaem synthase dimerisation region ILQ33_02345 PF14824 Sirohaem biosynthesis protein central ILQ33_02345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILQ33_02350 PF01226 Formate/nitrite transporter ILQ33_02355 PF13806 Rieske-like [2Fe-2S] domain ILQ33_02360 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_02360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILQ33_02360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILQ33_02360 PF04324 BFD-like [2Fe-2S] binding domain ILQ33_02360 PF18267 Rubredoxin NAD+ reductase C-terminal domain ILQ33_02365 PF07690 Major Facilitator Superfamily ILQ33_02370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILQ33_02375 PF10832 Protein of unknown function (DUF2559) ILQ33_02380 PF02661 Fic/DOC family ILQ33_02385 PF00117 Glutamine amidotransferase class-I ILQ33_02390 PF00202 Aminotransferase class-III ILQ33_02395 PF12805 FUSC-like inner membrane protein yccS ILQ33_02400 PF13545 Crp-like helix-turn-helix domain ILQ33_02400 PF00027 Cyclic nucleotide-binding domain ILQ33_02405 PF02566 OsmC-like protein ILQ33_02410 PF00485 Phosphoribulokinase / Uridine kinase family ILQ33_02415 PF06794 Uncharacterised protein family (UPF0270) ILQ33_02420 PF00561 alpha/beta hydrolase fold ILQ33_02425 PF00005 ABC transporter ILQ33_02425 PF12848 ABC transporter ILQ33_02430 PF02525 Flavodoxin-like fold ILQ33_02435 PF00999 Sodium/hydrogen exchanger family ILQ33_02435 PF02254 TrkA-N domain ILQ33_02440 PF09526 Probable metal-binding protein (DUF2387) ILQ33_02445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ33_02450 PF04102 SlyX ILQ33_02455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILQ33_02455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ33_02460 PF13309 HTH domain ILQ33_02460 PF08348 YheO-like PAS domain ILQ33_02465 PF02635 DsrE/DsrF-like family ILQ33_02470 PF02635 DsrE/DsrF-like family ILQ33_02475 PF04077 DsrH like protein ILQ33_02480 PF00164 Ribosomal protein S12/S23 ILQ33_02485 PF00177 Ribosomal protein S7p/S5e ILQ33_02490 PF03144 Elongation factor Tu domain 2 ILQ33_02490 PF00009 Elongation factor Tu GTP binding domain ILQ33_02490 PF03764 Elongation factor G, domain IV ILQ33_02490 PF14492 Elongation Factor G, domain II ILQ33_02490 PF00679 Elongation factor G C-terminus ILQ33_02495 PF03144 Elongation factor Tu domain 2 ILQ33_02495 PF03143 Elongation factor Tu C-terminal domain ILQ33_02495 PF00009 Elongation factor Tu GTP binding domain ILQ33_02500 PF04324 BFD-like [2Fe-2S] binding domain ILQ33_02505 PF00210 Ferritin-like domain ILQ33_02510 PF01478 Type IV leader peptidase family ILQ33_02515 PF00338 Ribosomal protein S10p/S20e ILQ33_02520 PF00297 Ribosomal protein L3 ILQ33_02525 PF00573 Ribosomal protein L4/L1 family ILQ33_02530 PF00276 Ribosomal protein L23 ILQ33_02535 PF03947 Ribosomal Proteins L2, C-terminal domain ILQ33_02535 PF00181 Ribosomal Proteins L2, RNA binding domain ILQ33_02540 PF00203 Ribosomal protein S19 ILQ33_02545 PF00237 Ribosomal protein L22p/L17e ILQ33_02550 PF07650 KH domain ILQ33_02550 PF00189 Ribosomal protein S3, C-terminal domain ILQ33_02555 PF00252 Ribosomal protein L16p/L10e ILQ33_02560 PF00831 Ribosomal L29 protein ILQ33_02565 PF00366 Ribosomal protein S17 ILQ33_02570 PF00238 Ribosomal protein L14p/L23e ILQ33_02575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ILQ33_02575 PF00467 KOW motif ILQ33_02580 PF00673 ribosomal L5P family C-terminus ILQ33_02580 PF00281 Ribosomal protein L5 ILQ33_02585 PF00253 Ribosomal protein S14p/S29e ILQ33_02590 PF00410 Ribosomal protein S8 ILQ33_02595 PF00347 Ribosomal protein L6 ILQ33_02600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ILQ33_02605 PF00333 Ribosomal protein S5, N-terminal domain ILQ33_02605 PF03719 Ribosomal protein S5, C-terminal domain ILQ33_02610 PF00327 Ribosomal protein L30p/L7e ILQ33_02615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ILQ33_02620 PF00344 SecY translocase ILQ33_02625 PF00444 Ribosomal protein L36 ILQ33_02630 PF00416 Ribosomal protein S13/S18 ILQ33_02635 PF00411 Ribosomal protein S11 ILQ33_02640 PF00163 Ribosomal protein S4/S9 N-terminal domain ILQ33_02640 PF01479 S4 domain ILQ33_02645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ILQ33_02645 PF01000 RNA polymerase Rpb3/RpoA insert domain ILQ33_02645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ILQ33_02650 PF01196 Ribosomal protein L17 ILQ33_02655 PF09350 Domain of unknown function (DUF1992) ILQ33_02660 PF13411 MerR HTH family regulatory protein ILQ33_02665 PF03889 Alternative ribosome-rescue factor A ILQ33_02670 PF01741 Large-conductance mechanosensitive channel, MscL ILQ33_02675 PF02080 TrkA-C domain ILQ33_02675 PF02254 TrkA-N domain ILQ33_02680 PF01189 16S rRNA methyltransferase RsmB/F ILQ33_02680 PF01029 NusB family ILQ33_02685 PF00551 Formyl transferase ILQ33_02685 PF02911 Formyl transferase, C-terminal domain ILQ33_02690 PF01327 Polypeptide deformylase ILQ33_02695 PF17782 DprA winged helix domain ILQ33_02695 PF02481 DNA recombination-mediator protein A ILQ33_02700 PF04361 Protein of unknown function (DUF494) ILQ33_02705 PF01396 Topoisomerase DNA binding C4 zinc finger ILQ33_02710 PF01300 Telomere recombination ILQ33_02715 PF01488 Shikimate / quinate 5-dehydrogenase ILQ33_02715 PF08501 Shikimate dehydrogenase substrate binding domain ILQ33_02715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ILQ33_02720 PF07369 Protein of unknown function (DUF1488) ILQ33_02725 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_02765 PF00005 ABC transporter ILQ33_02770 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_02775 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_02780 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_02795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_02795 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_02800 PF00440 Bacterial regulatory proteins, tetR family ILQ33_02800 PF08361 MAATS-type transcriptional repressor, C-terminal region ILQ33_02805 PF10831 Protein of unknown function (DUF2556) ILQ33_02810 PF01555 DNA methylase ILQ33_02815 PF02954 Bacterial regulatory protein, Fis family ILQ33_02820 PF01207 Dihydrouridine synthase (Dus) ILQ33_02830 PF00474 Sodium:solute symporter family ILQ33_02835 PF06196 Protein of unknown function (DUF997) ILQ33_02840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILQ33_02840 PF00289 Biotin carboxylase, N-terminal domain ILQ33_02840 PF02785 Biotin carboxylase C-terminal domain ILQ33_02845 PF00364 Biotin-requiring enzyme ILQ33_02850 PF00107 Zinc-binding dehydrogenase ILQ33_02850 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_02855 PF00563 EAL domain ILQ33_02855 PF17157 Gammaproteobacterial periplasmic sensor domain ILQ33_02855 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_02865 PF04085 rod shape-determining protein MreC ILQ33_02870 PF04093 rod shape-determining protein MreD ILQ33_02875 PF02545 Maf-like protein ILQ33_02880 PF10150 Ribonuclease E/G family ILQ33_02880 PF00575 S1 RNA binding domain ILQ33_02885 PF13502 AsmA-like C-terminal region ILQ33_02885 PF13116 Protein of unknown function ILQ33_02890 PF01523 Putative modulator of DNA gyrase ILQ33_02895 PF03466 LysR substrate binding domain ILQ33_02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_02900 PF07869 Protein of unknown function (DUF1656) ILQ33_02905 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_02905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_02910 PF04632 Fusaric acid resistance protein family ILQ33_02915 PF01337 Barstar (barnase inhibitor) ILQ33_02920 PF07338 Protein of unknown function (DUF1471) ILQ33_02925 PF02863 Arginine repressor, C-terminal domain ILQ33_02925 PF01316 Arginine repressor, DNA binding domain ILQ33_02930 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ILQ33_02930 PF00056 lactate/malate dehydrogenase, NAD binding domain ILQ33_02935 PF13180 PDZ domain ILQ33_02940 PF00595 PDZ domain ILQ33_02940 PF13180 PDZ domain ILQ33_02945 PF06295 Protein of unknown function (DUF1043) ILQ33_02950 PF03969 AFG1-like ATPase ILQ33_02955 PF00572 Ribosomal protein L13 ILQ33_02960 PF00380 Ribosomal protein S9/S16 ILQ33_02965 PF00043 Glutathione S-transferase, C-terminal domain ILQ33_02965 PF02798 Glutathione S-transferase, N-terminal domain ILQ33_02970 PF04386 Stringent starvation protein B ILQ33_02975 PF03606 C4-dicarboxylate anaerobic carrier ILQ33_02980 PF00392 Bacterial regulatory proteins, gntR family ILQ33_02980 PF07729 FCD domain ILQ33_02985 PF00701 Dihydrodipicolinate synthetase family ILQ33_02990 PF07690 Major Facilitator Superfamily ILQ33_02995 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ILQ33_03000 PF00480 ROK family ILQ33_03005 PF04074 YhcH/YjgK/YiaL ILQ33_03010 PF06250 YhcG PDDEXK nuclease domain ILQ33_03010 PF17761 DUF1016 N-terminal domain ILQ33_03015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ33_03015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_03020 PF01493 GXGXG motif ILQ33_03020 PF04898 Glutamate synthase central domain ILQ33_03020 PF00310 Glutamine amidotransferases class-II ILQ33_03020 PF01645 Conserved region in glutamate synthase ILQ33_03025 PF04055 Radical SAM superfamily ILQ33_03025 PF16199 Radical_SAM C-terminal domain ILQ33_03030 PF00072 Response regulator receiver domain ILQ33_03030 PF00989 PAS fold ILQ33_03030 PF01627 Hpt domain ILQ33_03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_03030 PF18415 Histidine kinase receptor ArcB trans-membrane domain ILQ33_03030 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_03040 PF00912 Transglycosylase ILQ33_03045 PF10707 PhoP regulatory network protein YrbL ILQ33_03050 PF00381 PTS HPr component phosphorylation site ILQ33_03055 PF03668 P-loop ATPase protein family ILQ33_03060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_03065 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ILQ33_03070 PF00309 Sigma-54 factor, Activator interacting domain (AID) ILQ33_03070 PF04963 Sigma-54 factor, core binding domain ILQ33_03070 PF04552 Sigma-54, DNA binding domain ILQ33_03075 PF12399 Branched-chain amino acid ATP-binding cassette transporter ILQ33_03075 PF00005 ABC transporter ILQ33_03080 PF03968 OstA-like protein ILQ33_03085 PF06835 Lipopolysaccharide-assembly, LptC-related ILQ33_03095 PF01380 SIS domain ILQ33_03095 PF00571 CBS domain ILQ33_03100 PF01699 Sodium/calcium exchanger protein ILQ33_03105 PF00005 ABC transporter ILQ33_03110 PF02405 Permease MlaE ILQ33_03115 PF02470 MlaD protein ILQ33_03120 PF05494 MlaC protein ILQ33_03125 PF13466 STAS domain ILQ33_03130 PF01722 BolA-like protein ILQ33_03135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILQ33_03140 PF13693 Winged helix-turn-helix DNA-binding ILQ33_03145 PF00348 Polyprenyl synthetase ILQ33_03150 PF00829 Ribosomal prokaryotic L21 protein ILQ33_03155 PF01016 Ribosomal L27 protein ILQ33_03160 PF00892 EamA-like transporter family ILQ33_03165 PF01018 GTP1/OBG ILQ33_03165 PF01926 50S ribosome-binding GTPase ILQ33_03170 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ILQ33_03175 PF03449 Transcription elongation factor, N-terminal ILQ33_03175 PF01272 Transcription elongation factor, GreA/GreB, C-term ILQ33_03180 PF01985 CRS1 / YhbY (CRM) domain ILQ33_03185 PF01728 FtsJ-like methyltransferase ILQ33_03190 PF06480 FtsH Extracellular ILQ33_03190 PF17862 AAA+ lid domain ILQ33_03190 PF00004 ATPase family associated with various cellular activities (AAA) ILQ33_03190 PF01434 Peptidase family M41 ILQ33_03195 PF00809 Pterin binding enzyme ILQ33_03200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ33_03200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ33_03200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ33_03200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ33_03205 PF03840 Preprotein translocase SecG subunit ILQ33_03215 PF00884 Sulfatase ILQ33_03220 PF00764 Arginosuccinate synthase ILQ33_03230 PF02576 RimP N-terminal domain ILQ33_03230 PF17384 RimP C-terminal SH3 domain ILQ33_03235 PF08529 NusA N-terminal domain ILQ33_03235 PF00575 S1 RNA binding domain ILQ33_03235 PF13184 NusA-like KH domain ILQ33_03240 PF04760 Translation initiation factor IF-2, N-terminal region ILQ33_03240 PF11987 Translation-initiation factor 2 ILQ33_03240 PF00009 Elongation factor Tu GTP binding domain ILQ33_03240 PF08364 Bacterial translation initiation factor IF-2 associated region ILQ33_03245 PF02033 Ribosome-binding factor A ILQ33_03250 PF09157 Pseudouridine synthase II TruB, C-terminal ILQ33_03250 PF16198 tRNA pseudouridylate synthase B C-terminal domain ILQ33_03250 PF01509 TruB family pseudouridylate synthase (N terminal domain) ILQ33_03255 PF00312 Ribosomal protein S15 ILQ33_03260 PF00013 KH domain ILQ33_03260 PF01138 3' exoribonuclease family, domain 1 ILQ33_03260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ILQ33_03260 PF03725 3' exoribonuclease family, domain 2 ILQ33_03260 PF00575 S1 RNA binding domain ILQ33_03265 PF07719 Tetratricopeptide repeat ILQ33_03265 PF13181 Tetratricopeptide repeat ILQ33_03275 PF00270 DEAD/DEAH box helicase ILQ33_03275 PF12343 Cold shock protein DEAD box A ILQ33_03275 PF00271 Helicase conserved C-terminal domain ILQ33_03275 PF03880 DbpA RNA binding domain ILQ33_03280 PF03222 Tryptophan/tyrosine permease family ILQ33_03285 PF00296 Luciferase-like monooxygenase ILQ33_03290 PF01136 Peptidase family U32 ILQ33_03295 PF01136 Peptidase family U32 ILQ33_03300 PF02036 SCP-2 sterol transfer family ILQ33_03305 PF13508 Acetyltransferase (GNAT) domain ILQ33_03310 PF01541 GIY-YIG catalytic domain ILQ33_03320 PF01965 DJ-1/PfpI family ILQ33_03325 PF13460 NAD(P)H-binding ILQ33_03330 PF03773 Predicted permease ILQ33_03335 PF04972 BON domain ILQ33_03340 PF13580 SIS domain ILQ33_03345 PF02021 Uncharacterised protein family UPF0102 ILQ33_03350 PF04348 LppC putative lipoprotein ILQ33_03355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILQ33_03375 PF00577 Outer membrane usher protein ILQ33_03375 PF13954 PapC N-terminal domain ILQ33_03375 PF13953 PapC C-terminal domain ILQ33_03380 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_03380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_03385 PF00419 Fimbrial protein ILQ33_03395 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ33_03405 PF03830 PTS system sorbose subfamily IIB component ILQ33_03410 PF01116 Fructose-bisphosphate aldolase class-II ILQ33_03415 PF01380 SIS domain ILQ33_03420 PF01979 Amidohydrolase family ILQ33_03425 PF03610 PTS system fructose IIA component ILQ33_03430 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ33_03435 PF03609 PTS system sorbose-specific iic component ILQ33_03440 PF03830 PTS system sorbose subfamily IIB component ILQ33_03445 PF08013 Tagatose 6 phosphate kinase ILQ33_03450 PF08220 DeoR-like helix-turn-helix domain ILQ33_03450 PF00455 DeoR C terminal sensor domain ILQ33_03455 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system ILQ33_03460 PF15937 prlF antitoxin for toxin YhaV_toxin ILQ33_03465 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ILQ33_03465 PF08666 SAF domain ILQ33_03470 PF07690 Major Facilitator Superfamily ILQ33_03475 PF03328 HpcH/HpaI aldolase/citrate lyase family ILQ33_03480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILQ33_03480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ33_03485 PF02595 Glycerate kinase family ILQ33_03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_03510 PF03466 LysR substrate binding domain ILQ33_03515 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_03520 PF03222 Tryptophan/tyrosine permease family ILQ33_03525 PF00871 Acetokinase family ILQ33_03530 PF02901 Pyruvate formate lyase-like ILQ33_03530 PF01228 Glycine radical ILQ33_03535 PF01042 Endoribonuclease L-PSP ILQ33_03540 PF03313 Serine dehydratase alpha chain ILQ33_03540 PF03315 Serine dehydratase beta chain ILQ33_03550 PF03313 Serine dehydratase alpha chain ILQ33_03560 PF17954 Quercetinase C-terminal cupin domain ILQ33_03560 PF02678 Pirin ILQ33_03565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_03565 PF03466 LysR substrate binding domain ILQ33_03570 PF05656 Protein of unknown function (DUF805) ILQ33_03575 PF05656 Protein of unknown function (DUF805) ILQ33_03580 PF13409 Glutathione S-transferase, N-terminal domain ILQ33_03585 PF07681 DoxX ILQ33_03590 PF13997 YqjK-like protein ILQ33_03595 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ILQ33_03600 PF05957 Bacterial protein of unknown function (DUF883) ILQ33_03605 PF06476 Protein of unknown function (DUF1090) ILQ33_03610 PF13721 SecD export protein N-terminal TM region ILQ33_03615 PF09335 SNARE associated Golgi protein ILQ33_03620 PF00392 Bacterial regulatory proteins, gntR family ILQ33_03620 PF07729 FCD domain ILQ33_03625 PF07690 Major Facilitator Superfamily ILQ33_03630 PF02614 Glucuronate isomerase ILQ33_03635 PF08666 SAF domain ILQ33_03635 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ILQ33_03640 PF10688 Bacterial inner membrane protein ILQ33_03645 PF00375 Sodium:dicarboxylate symporter family ILQ33_03650 PF03741 Integral membrane protein TerC family ILQ33_03655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ33_03660 PF02698 DUF218 domain ILQ33_03665 PF01863 Protein of unknown function DUF45 ILQ33_03670 PF05175 Methyltransferase small domain ILQ33_03675 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system ILQ33_03680 PF01381 Helix-turn-helix ILQ33_03685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILQ33_03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_03690 PF01204 Trehalase ILQ33_03700 PF13520 Amino acid permease ILQ33_03705 PF04074 YhcH/YjgK/YiaL ILQ33_03710 PF00703 Glycosyl hydrolases family 2 ILQ33_03710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ILQ33_03710 PF02929 Beta galactosidase small chain ILQ33_03710 PF02837 Glycosyl hydrolases family 2, sugar binding domain ILQ33_03710 PF16353 Domain of unknown function(DUF4981) ILQ33_03715 PF00356 Bacterial regulatory proteins, lacI family ILQ33_03720 PF01588 Putative tRNA binding domain ILQ33_03725 PF00202 Aminotransferase class-III ILQ33_03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ33_03730 PF08447 PAS fold ILQ33_03735 PF03551 Transcriptional regulator PadR-like family ILQ33_03740 PF04954 Siderophore-interacting protein ILQ33_03740 PF08021 Siderophore-interacting FAD-binding domain ILQ33_03750 PF03167 Uracil DNA glycosylase superfamily ILQ33_03755 PF00140 Sigma-70 factor, region 1.2 ILQ33_03755 PF03979 Sigma-70 factor, region 1.1 ILQ33_03755 PF04539 Sigma-70 region 3 ILQ33_03755 PF04546 Sigma-70, non-essential region ILQ33_03755 PF04542 Sigma-70 region 2 ILQ33_03755 PF04545 Sigma-70, region 4 ILQ33_03760 PF01807 CHC2 zinc finger ILQ33_03760 PF08275 DNA primase catalytic core, N-terminal domain ILQ33_03760 PF10410 DnaB-helicase binding domain of primase ILQ33_03760 PF08278 DNA primase DnaG DnaB-binding ILQ33_03765 PF01165 Ribosomal protein S21 ILQ33_03770 PF00814 Glycoprotease family ILQ33_03775 PF00939 Sodium:sulfate symporter transmembrane region ILQ33_03780 PF05683 Fumarase C-terminus ILQ33_03785 PF05681 Fumarate hydratase (Fumerase) ILQ33_03790 PF03466 LysR substrate binding domain ILQ33_03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_03795 PF02660 Glycerol-3-phosphate acyltransferase ILQ33_03800 PF02152 Dihydroneopterin aldolase ILQ33_03805 PF02673 Bacitracin resistance protein BacA ILQ33_03810 PF01743 Poly A polymerase head domain ILQ33_03810 PF12627 Probable RNA and SrmB- binding site of polymerase A ILQ33_03810 PF01966 HD domain ILQ33_03815 PF08239 Bacterial SH3 domain ILQ33_03820 PF01928 CYTH domain ILQ33_03825 PF03710 Glutamate-ammonia ligase adenylyltransferase ILQ33_03825 PF08335 GlnD PII-uridylyltransferase ILQ33_03830 PF00294 pfkB family carbohydrate kinase ILQ33_03830 PF01467 Cytidylyltransferase-like ILQ33_03845 PF15975 Flotillin ILQ33_03845 PF01145 SPFH domain / Band 7 family ILQ33_03850 PF07290 Protein of unknown function (DUF1449) ILQ33_03855 PF08971 Glycogen synthesis protein ILQ33_03860 PF04380 Membrane fusogenic activity ILQ33_03865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ILQ33_03875 PF02535 ZIP Zinc transporter ILQ33_03880 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ILQ33_03885 PF03738 Glutathionylspermidine synthase preATP-grasp ILQ33_03890 PF06693 Protein of unknown function (DUF1190) ILQ33_03895 PF02321 Outer membrane efflux protein ILQ33_03900 PF00293 NUDIX domain ILQ33_03905 PF06853 Protein of unknown function (DUF1249) ILQ33_03910 PF00149 Calcineurin-like phosphoesterase ILQ33_03915 PF05728 Uncharacterised protein family (UPF0227) ILQ33_03920 PF01751 Toprim domain ILQ33_03920 PF00986 DNA gyrase B subunit, carboxyl terminus ILQ33_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_03920 PF00204 DNA gyrase B ILQ33_03925 PF07715 TonB-dependent Receptor Plug Domain ILQ33_03930 PF00005 ABC transporter ILQ33_03935 PF01032 FecCD transport family ILQ33_03940 PF01032 FecCD transport family ILQ33_03950 PF01380 SIS domain ILQ33_03950 PF01418 Helix-turn-helix domain, rpiR family ILQ33_03955 PF03992 Antibiotic biosynthesis monooxygenase ILQ33_03960 PF02525 Flavodoxin-like fold ILQ33_03965 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_03965 PF08521 Two-component sensor kinase N-terminal ILQ33_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_03970 PF00486 Transcriptional regulatory protein, C terminal ILQ33_03970 PF00072 Response regulator receiver domain ILQ33_03975 PF04076 Bacterial OB fold (BOF) protein ILQ33_03980 PF06445 GyrI-like small molecule binding domain ILQ33_03985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_03990 PF00521 DNA gyrase/topoisomerase IV, subunit A ILQ33_03990 PF03989 DNA gyrase C-terminal domain, beta-propeller ILQ33_03995 PF01553 Acyltransferase ILQ33_04000 PF00394 Multicopper oxidase ILQ33_04000 PF07732 Multicopper oxidase ILQ33_04000 PF07731 Multicopper oxidase ILQ33_04005 PF11842 Domain of unknown function (DUF3362) ILQ33_04005 PF08497 Radical SAM N-terminal ILQ33_04005 PF04055 Radical SAM superfamily ILQ33_04010 PF04728 Lipoprotein leucine-zipper ILQ33_04020 PF00248 Aldo/keto reductase family ILQ33_04025 PF00465 Iron-containing alcohol dehydrogenase ILQ33_04030 PF12833 Helix-turn-helix domain ILQ33_04030 PF06719 AraC-type transcriptional regulator N-terminus ILQ33_04035 PF09335 SNARE associated Golgi protein ILQ33_04040 PF01053 Cys/Met metabolism PLP-dependent enzyme ILQ33_04045 PF01618 MotA/TolQ/ExbB proton channel family ILQ33_04050 PF02472 Biopolymer transport protein ExbD/TolR ILQ33_04060 PF03350 Uncharacterized protein family, UPF0114 ILQ33_04065 PF00248 Aldo/keto reductase family ILQ33_04070 PF01738 Dienelactone hydrolase family ILQ33_04075 PF11115 Protein of unknown function (DUF2623) ILQ33_04080 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ33_04080 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ILQ33_04085 PF13247 4Fe-4S dicluster domain ILQ33_04090 PF03916 Polysulphide reductase, NrfD ILQ33_04095 PF00374 Nickel-dependent hydrogenase ILQ33_04100 PF01750 Hydrogenase maturation protease ILQ33_04105 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE ILQ33_04110 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ILQ33_04115 PF01455 HupF/HypC family ILQ33_04120 PF02798 Glutathione S-transferase, N-terminal domain ILQ33_04125 PF05257 CHAP domain ILQ33_04125 PF03738 Glutathionylspermidine synthase preATP-grasp ILQ33_04150 PF05717 IS66 Orf2 like protein ILQ33_04155 PF03050 Transposase IS66 family ILQ33_04155 PF13007 Transposase C of IS166 homeodomain ILQ33_04155 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_04155 PF13817 IS66 C-terminal element ILQ33_04160 PF05717 IS66 Orf2 like protein ILQ33_04170 PF01473 Putative cell wall binding repeat ILQ33_04170 PF12919 TcdA/TcdB catalytic glycosyltransferase domain ILQ33_04170 PF12920 TcdA/TcdB pore forming domain ILQ33_04170 PF12918 TcdB toxin N-terminal helical domain ILQ33_04170 PF11713 Peptidase C80 family ILQ33_04215 PF06316 Enterobacterial Ail/Lom protein ILQ33_04230 PF05717 IS66 Orf2 like protein ILQ33_04245 PF00589 Phage integrase family ILQ33_04245 PF13356 Arm DNA-binding domain ILQ33_04255 PF04474 Protein of unknown function (DUF554) ILQ33_04260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ33_04260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ33_04260 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ33_04265 PF03825 Nucleoside H+ symporter ILQ33_04270 PF01464 Transglycosylase SLT domain ILQ33_04270 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ILQ33_04275 PF04362 Bacterial Fe(2+) trafficking ILQ33_04280 PF14815 NUDIX domain ILQ33_04280 PF00730 HhH-GPD superfamily base excision DNA repair protein ILQ33_04280 PF00633 Helix-hairpin-helix motif ILQ33_04280 PF10576 Iron-sulfur binding domain of endonuclease III ILQ33_04285 PF02390 Putative methyltransferase ILQ33_04290 PF04320 Protein with unknown function (DUF469) ILQ33_04295 PF11101 Protein of unknown function (DUF2884) ILQ33_04300 PF00710 Asparaginase, N-terminal ILQ33_04300 PF17763 Glutaminase/Asparaginase C-terminal domain ILQ33_04305 PF06717 Protein of unknown function (DUF1202) ILQ33_04310 PF06969 HemN C-terminal domain ILQ33_04310 PF04055 Radical SAM superfamily ILQ33_04315 PF01725 Ham1 family ILQ33_04320 PF02594 Uncharacterised ACR, YggU family COG1872 ILQ33_04325 PF02325 YGGT family ILQ33_04330 PF01168 Alanine racemase, N-terminal domain ILQ33_04335 PF00437 Type II/IV secretion system protein ILQ33_04340 PF03652 Holliday junction resolvase ILQ33_04345 PF02622 Uncharacterized ACR, COG1678 ILQ33_04350 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ILQ33_04350 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ILQ33_04355 PF04452 RNA methyltransferase ILQ33_04360 PF04231 Endonuclease I ILQ33_04365 PF17283 SprT-like zinc ribbon domain ILQ33_04365 PF10263 SprT-like family ILQ33_04370 PF00083 Sugar (and other) transporter ILQ33_04375 PF00438 S-adenosylmethionine synthetase, N-terminal domain ILQ33_04375 PF02772 S-adenosylmethionine synthetase, central domain ILQ33_04375 PF02773 S-adenosylmethionine synthetase, C-terminal domain ILQ33_04380 PF17430 Uncharacterized YqgC-like ILQ33_04385 PF11036 Virulence promoting factor ILQ33_04390 PF17810 Arginine decarboxylase helical bundle domain ILQ33_04390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ILQ33_04390 PF17944 Arginine decarboxylase C-terminal helical extension ILQ33_04400 PF00491 Arginase family ILQ33_04405 PF01435 Peptidase family M48 ILQ33_04410 PF00456 Transketolase, thiamine diphosphate binding domain ILQ33_04410 PF02780 Transketolase, C-terminal domain ILQ33_04410 PF02779 Transketolase, pyrimidine binding domain ILQ33_04415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_04420 PF02378 Phosphotransferase system, EIIC ILQ33_04420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_04425 PF00107 Zinc-binding dehydrogenase ILQ33_04425 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_04430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ILQ33_04435 PF05068 Mannitol repressor ILQ33_04445 PF00005 ABC transporter ILQ33_04450 PF00005 ABC transporter ILQ33_04470 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILQ33_04470 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILQ33_04475 PF00162 Phosphoglycerate kinase ILQ33_04480 PF01116 Fructose-bisphosphate aldolase class-II ILQ33_04485 PF00924 Mechanosensitive ion channel ILQ33_04485 PF05552 Conserved TM helix ILQ33_04490 PF01810 LysE type translocator ILQ33_04495 PF04402 Protein of unknown function (DUF541) ILQ33_04505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ILQ33_04505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ILQ33_04510 PF00378 Enoyl-CoA hydratase/isomerase ILQ33_04520 PF01642 Methylmalonyl-CoA mutase ILQ33_04520 PF02310 B12 binding domain ILQ33_04525 PF03466 LysR substrate binding domain ILQ33_04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_04530 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ILQ33_04535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ33_04535 PF01842 ACT domain ILQ33_04535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ33_04550 PF01812 5-formyltetrahydrofolate cyclo-ligase family ILQ33_04560 PF05164 Cell division protein ZapA ILQ33_04565 PF03695 Uncharacterised protein family (UPF0149) ILQ33_04570 PF05195 Aminopeptidase P, N-terminal domain ILQ33_04570 PF00557 Metallopeptidase family M24 ILQ33_04575 PF01494 FAD binding domain ILQ33_04580 PF01494 FAD binding domain ILQ33_04590 PF08669 Glycine cleavage T-protein C-terminal barrel domain ILQ33_04590 PF01571 Aminomethyltransferase folate-binding domain ILQ33_04595 PF01597 Glycine cleavage H-protein ILQ33_04600 PF02347 Glycine cleavage system P-protein ILQ33_04605 PF00232 Glycosyl hydrolase family 1 ILQ33_04610 PF04266 ASCH domain ILQ33_04615 PF03006 Haemolysin-III related ILQ33_04620 PF01571 Aminomethyltransferase folate-binding domain ILQ33_04625 PF03937 Flavinator of succinate dehydrogenase ILQ33_04630 PF07254 Membrane-bound toxin component of toxin-antitoxin system ILQ33_04635 PF00258 Flavodoxin ILQ33_04640 PF02899 Phage integrase, N-terminal SAM-like domain ILQ33_04640 PF00589 Phage integrase family ILQ33_04645 PF10411 Disulfide bond isomerase protein N-terminus ILQ33_04645 PF13098 Thioredoxin-like domain ILQ33_04650 PF01368 DHH family ILQ33_04650 PF02272 DHHA1 domain ILQ33_04650 PF17768 RecJ OB domain ILQ33_04660 PF00152 tRNA synthetases class II (D, K and N) ILQ33_04660 PF01336 OB-fold nucleic acid binding domain ILQ33_04665 PF00293 NUDIX domain ILQ33_04680 PF00860 Permease family ILQ33_04705 PF00860 Permease family ILQ33_04710 PF01979 Amidohydrolase family ILQ33_04715 PF00860 Permease family ILQ33_04720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILQ33_04720 PF01799 [2Fe-2S] binding domain ILQ33_04720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILQ33_04725 PF00941 FAD binding domain in molybdopterin dehydrogenase ILQ33_04730 PF01979 Amidohydrolase family ILQ33_04735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ33_04735 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_04740 PF12804 MobA-like NTP transferase domain ILQ33_04750 PF13478 XdhC Rossmann domain ILQ33_04750 PF02625 XdhC and CoxI family ILQ33_04755 PF00696 Amino acid kinase family ILQ33_04760 PF01979 Amidohydrolase family ILQ33_04765 PF01546 Peptidase family M20/M25/M40 ILQ33_04765 PF07687 Peptidase dimerisation domain ILQ33_04770 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_04775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILQ33_04775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILQ33_04780 PF13188 PAS domain ILQ33_04780 PF00158 Sigma-54 interaction domain ILQ33_04780 PF02954 Bacterial regulatory protein, Fis family ILQ33_04785 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ33_04785 PF01799 [2Fe-2S] binding domain ILQ33_04790 PF00941 FAD binding domain in molybdopterin dehydrogenase ILQ33_04790 PF03450 CO dehydrogenase flavoprotein C-terminal domain ILQ33_04795 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILQ33_04795 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILQ33_04800 PF01551 Peptidase family M23 ILQ33_04800 PF01476 LysM domain ILQ33_04820 PF12833 Helix-turn-helix domain ILQ33_04825 PF00263 Bacterial type II and III secretion system protein ILQ33_04825 PF03958 Bacterial type II/III secretion system short domain ILQ33_04830 PF07201 HrpJ-like domain ILQ33_04835 PF00771 FHIPEP family ILQ33_04840 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILQ33_04840 PF18269 T3SS EscN ATPase C-terminal domain ILQ33_04840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ33_04855 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ILQ33_04860 PF00813 FliP family ILQ33_04865 PF01313 Bacterial export proteins, family 3 ILQ33_04875 PF01312 FlhB HrpN YscU SpaS Family ILQ33_04895 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF ILQ33_04905 PF01514 Secretory protein of YscJ/FliF family ILQ33_04910 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) ILQ33_04925 PF00196 Bacterial regulatory proteins, luxR family ILQ33_04925 PF00072 Response regulator receiver domain ILQ33_04930 PF01464 Transglycosylase SLT domain ILQ33_04940 PF00486 Transcriptional regulatory protein, C terminal ILQ33_04945 PF07720 Tetratricopeptide repeat ILQ33_04970 PF00486 Transcriptional regulatory protein, C terminal ILQ33_04975 PF00196 Bacterial regulatory proteins, luxR family ILQ33_04980 PF03222 Tryptophan/tyrosine permease family ILQ33_04985 PF02803 Thiolase, C-terminal domain ILQ33_04985 PF00108 Thiolase, N-terminal domain ILQ33_04990 PF04962 KduI/IolB family ILQ33_05000 PF00083 Sugar (and other) transporter ILQ33_05005 PF01177 Asp/Glu/Hydantoin racemase ILQ33_05010 PF03466 LysR substrate binding domain ILQ33_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_05015 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ILQ33_05015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ILQ33_05020 PF00356 Bacterial regulatory proteins, lacI family ILQ33_05025 PF00501 AMP-binding enzyme ILQ33_05025 PF01553 Acyltransferase ILQ33_05030 PF07690 Major Facilitator Superfamily ILQ33_05035 PF00248 Aldo/keto reductase family ILQ33_05040 PF06004 Bacterial protein of unknown function (DUF903) ILQ33_05045 PF03741 Integral membrane protein TerC family ILQ33_05050 PF02976 DNA mismatch repair enzyme MutH ILQ33_05055 PF00293 NUDIX domain ILQ33_05060 PF00391 PEP-utilising enzyme, mobile domain ILQ33_05060 PF05524 PEP-utilising enzyme, N-terminal ILQ33_05060 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ33_05060 PF01590 GAF domain ILQ33_05065 PF01790 Prolipoprotein diacylglyceryl transferase ILQ33_05070 PF00303 Thymidylate synthase ILQ33_05075 PF07963 Prokaryotic N-terminal methylation motif ILQ33_05080 PF07963 Prokaryotic N-terminal methylation motif ILQ33_05085 PF10713 Protein of unknown function (DUF2509) ILQ33_05090 PF07963 Prokaryotic N-terminal methylation motif ILQ33_05090 PF12528 Type II secretion prepilin peptidase dependent protein C ILQ33_05095 PF17946 RecC C-terminal domain ILQ33_05100 PF16187 Middle or third domain of peptidase_M16 ILQ33_05100 PF00675 Insulinase (Peptidase family M16) ILQ33_05100 PF05193 Peptidase M16 inactive domain ILQ33_05105 PF13361 UvrD-like helicase C-terminal domain ILQ33_05105 PF00580 UvrD/REP helicase N-terminal domain ILQ33_05105 PF12705 PD-(D/E)XK nuclease superfamily ILQ33_05110 PF13538 UvrD-like helicase C-terminal domain ILQ33_05115 PF00696 Amino acid kinase family ILQ33_05115 PF00583 Acetyltransferase (GNAT) family ILQ33_05120 PF11741 AMIN domain ILQ33_05120 PF01520 N-acetylmuramoyl-L-alanine amidase ILQ33_05140 PF03562 MltA specific insert domain ILQ33_05140 PF06725 3D domain ILQ33_05145 PF00899 ThiF family ILQ33_05150 PF02657 Fe-S metabolism associated domain ILQ33_05155 PF00266 Aminotransferase class-V ILQ33_05160 PF06004 Bacterial protein of unknown function (DUF903) ILQ33_05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_05165 PF03466 LysR substrate binding domain ILQ33_05170 PF04241 Protein of unknown function (DUF423) ILQ33_05175 PF18125 RlmM ferredoxin-like domain ILQ33_05175 PF01728 FtsJ-like methyltransferase ILQ33_05180 PF08220 DeoR-like helix-turn-helix domain ILQ33_05180 PF00455 DeoR C terminal sensor domain ILQ33_05185 PF05025 RbsD / FucU transport protein family ILQ33_05190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ33_05190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ33_05195 PF02952 L-fucose isomerase, C-terminal domain ILQ33_05195 PF07882 L-fucose isomerase, second N-terminal domain ILQ33_05195 PF07881 L-fucose isomerase, first N-terminal domain ILQ33_05200 PF07690 Major Facilitator Superfamily ILQ33_05205 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ33_05210 PF00465 Iron-containing alcohol dehydrogenase ILQ33_05215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ILQ33_05215 PF01367 5'-3' exonuclease, C-terminal SAM fold ILQ33_05220 PF03313 Serine dehydratase alpha chain ILQ33_05220 PF03315 Serine dehydratase beta chain ILQ33_05230 PF03641 Possible lysine decarboxylase ILQ33_05230 PF11892 Domain of unknown function (DUF3412) ILQ33_05230 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ILQ33_05235 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ILQ33_05235 PF14489 QueF-like protein ILQ33_05240 PF07348 Syd protein (SUKH-2) ILQ33_05245 PF04287 tRNA pseudouridine synthase C ILQ33_05250 PF00849 RNA pseudouridylate synthase ILQ33_05255 PF00258 Flavodoxin ILQ33_05260 PF07690 Major Facilitator Superfamily ILQ33_05270 PF13378 Enolase C-terminal domain-like ILQ33_05275 PF00672 HAMP domain ILQ33_05275 PF00072 Response regulator receiver domain ILQ33_05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_05275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ILQ33_05275 PF01627 Hpt domain ILQ33_05275 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_05280 PF01938 TRAM domain ILQ33_05280 PF05958 tRNA (Uracil-5-)-methyltransferase ILQ33_05285 PF13291 ACT domain ILQ33_05285 PF04607 Region found in RelA / SpoT proteins ILQ33_05285 PF02824 TGS domain ILQ33_05290 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ILQ33_05295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ILQ33_05300 PF03819 MazG nucleotide pyrophosphohydrolase domain ILQ33_05305 PF06418 CTP synthase N-terminus ILQ33_05305 PF00117 Glutamine amidotransferase class-I ILQ33_05310 PF00113 Enolase, C-terminal TIM barrel domain ILQ33_05310 PF03952 Enolase, N-terminal domain ILQ33_05315 PF04536 TPM domain ILQ33_05325 PF04536 TPM domain ILQ33_05335 PF04055 Radical SAM superfamily ILQ33_05340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ33_05340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ33_05345 PF07690 Major Facilitator Superfamily ILQ33_05355 PF01565 FAD binding domain ILQ33_05355 PF02913 FAD linked oxidases, C-terminal domain ILQ33_05365 PF01012 Electron transfer flavoprotein domain ILQ33_05375 PF04309 Glycerol-3-phosphate responsive antiterminator ILQ33_05385 PF01266 FAD dependent oxidoreductase ILQ33_05390 PF01242 6-pyruvoyl tetrahydropterin synthase ILQ33_05395 PF00667 FAD binding domain ILQ33_05395 PF00258 Flavodoxin ILQ33_05395 PF00175 Oxidoreductase NAD-binding domain ILQ33_05400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILQ33_05400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILQ33_05405 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ33_05410 PF01848 Hok/gef family ILQ33_05415 PF00270 DEAD/DEAH box helicase ILQ33_05415 PF00271 Helicase conserved C-terminal domain ILQ33_05415 PF18019 HD domain ILQ33_05420 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) ILQ33_05430 PF09344 CT1975-like protein ILQ33_05435 PF09704 CRISPR-associated protein (Cas_Cas5) ILQ33_05445 PF01867 CRISPR associated protein Cas1 ILQ33_05450 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) ILQ33_05455 PF04389 Peptidase family M28 ILQ33_05460 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ33_05465 PF00009 Elongation factor Tu GTP binding domain ILQ33_05475 PF12084 Protein of unknown function (DUF3561) ILQ33_05480 PF04977 Septum formation initiator ILQ33_05485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ILQ33_05490 PF02542 YgbB family ILQ33_05495 PF01142 tRNA pseudouridine synthase D (TruD) ILQ33_05500 PF01975 Survival protein SurE ILQ33_05510 PF01476 LysM domain ILQ33_05510 PF01551 Peptidase family M23 ILQ33_05515 PF04545 Sigma-70, region 4 ILQ33_05515 PF04542 Sigma-70 region 2 ILQ33_05515 PF00140 Sigma-70 factor, region 1.2 ILQ33_05515 PF04539 Sigma-70 region 3 ILQ33_05520 PF01047 MarR family ILQ33_05525 PF02441 Flavoprotein ILQ33_05530 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ILQ33_05540 PF00149 Calcineurin-like phosphoesterase ILQ33_05545 PF00488 MutS domain V ILQ33_05545 PF05190 MutS family domain IV ILQ33_05545 PF05192 MutS domain III ILQ33_05545 PF05188 MutS domain II ILQ33_05545 PF01624 MutS domain I ILQ33_05555 PF11756 Nitrous oxide-stimulated promoter ILQ33_05560 PF01590 GAF domain ILQ33_05560 PF00158 Sigma-54 interaction domain ILQ33_05565 PF02769 AIR synthase related protein, C-terminal domain ILQ33_05565 PF00586 AIR synthase related protein, N-terminal domain ILQ33_05570 PF01924 Hydrogenase formation hypA family ILQ33_05575 PF01455 HupF/HypC family ILQ33_05580 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ33_05585 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ILQ33_05590 PF11046 Transcriptional repressor of hyc and hyp operons ILQ33_05595 PF13247 4Fe-4S dicluster domain ILQ33_05600 PF00361 Proton-conducting membrane transporter ILQ33_05605 PF00146 NADH dehydrogenase ILQ33_05610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILQ33_05610 PF00374 Nickel-dependent hydrogenase ILQ33_05610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILQ33_05615 PF12838 4Fe-4S dicluster domain ILQ33_05620 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ33_05625 PF07450 Formate hydrogenlyase maturation protein HycH ILQ33_05630 PF01750 Hydrogenase maturation protease ILQ33_05635 PF00232 Glycosyl hydrolase family 1 ILQ33_05640 PF02378 Phosphotransferase system, EIIC ILQ33_05640 PF00367 phosphotransferase system, EIIB ILQ33_05645 PF00356 Bacterial regulatory proteins, lacI family ILQ33_05650 PF13247 4Fe-4S dicluster domain ILQ33_05650 PF12800 4Fe-4S binding domain ILQ33_05655 PF00708 Acylphosphatase ILQ33_05655 PF17788 HypF Kae1-like domain ILQ33_05655 PF01300 Telomere recombination ILQ33_05655 PF07503 HypF finger ILQ33_05660 PF18113 Rubredoxin binding C-terminal domain ILQ33_05660 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_05665 PF00258 Flavodoxin ILQ33_05665 PF00301 Rubredoxin ILQ33_05665 PF00753 Metallo-beta-lactamase superfamily ILQ33_05670 PF01590 GAF domain ILQ33_05670 PF00158 Sigma-54 interaction domain ILQ33_05675 PF00571 CBS domain ILQ33_05675 PF01380 SIS domain ILQ33_05680 PF00455 DeoR C terminal sensor domain ILQ33_05680 PF08220 DeoR-like helix-turn-helix domain ILQ33_05685 PF06923 Glucitol operon activator protein (GutM) ILQ33_05690 PF00106 short chain dehydrogenase ILQ33_05695 PF03829 PTS system glucitol/sorbitol-specific IIA component ILQ33_05710 PF13406 Transglycosylase SLT domain ILQ33_05715 PF02464 Competence-damaged protein ILQ33_05720 PF00154 recA bacterial DNA recombination protein ILQ33_05725 PF02631 RecX family ILQ33_05730 PF02272 DHHA1 domain ILQ33_05730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILQ33_05730 PF01411 tRNA synthetases class II (A) ILQ33_05735 PF02599 Global regulator protein family ILQ33_05765 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_05770 PF09335 SNARE associated Golgi protein ILQ33_05775 PF04262 Glutamate-cysteine ligase ILQ33_05780 PF02664 S-Ribosylhomocysteinase (LuxS) ILQ33_05785 PF07690 Major Facilitator Superfamily ILQ33_05790 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_05790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_05795 PF01047 MarR family ILQ33_05800 PF05437 Branched-chain amino acid transport protein (AzlD) ILQ33_05805 PF03591 AzlC protein ILQ33_05810 PF07690 Major Facilitator Superfamily ILQ33_05815 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILQ33_05820 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_05825 PF00571 CBS domain ILQ33_05825 PF00005 ABC transporter ILQ33_05830 PF00268 Ribonucleotide reductase, small chain ILQ33_05835 PF08343 Ribonucleotide reductase N-terminal ILQ33_05835 PF00317 Ribonucleotide reductase, all-alpha domain ILQ33_05835 PF02867 Ribonucleotide reductase, barrel domain ILQ33_05840 PF07972 NrdI Flavodoxin like ILQ33_05845 PF00462 Glutaredoxin ILQ33_05850 PF02627 Carboxymuconolactone decarboxylase family ILQ33_05855 PF00155 Aminotransferase class I and II ILQ33_05855 PF00392 Bacterial regulatory proteins, gntR family ILQ33_05860 PF05957 Bacterial protein of unknown function (DUF883) ILQ33_05865 PF09400 Protein of unknown function (DUF2002) ILQ33_05870 PF06610 L-alanine exporter ILQ33_05875 PF00816 H-NS histone family ILQ33_05880 PF00581 Rhodanese-like domain ILQ33_05880 PF11127 Protein of unknown function (DUF2892) ILQ33_05885 PF01022 Bacterial regulatory protein, arsR family ILQ33_05890 PF01679 Proteolipid membrane potential modulator ILQ33_05895 PF04972 BON domain ILQ33_05895 PF01476 LysM domain ILQ33_05900 PF00392 Bacterial regulatory proteins, gntR family ILQ33_05900 PF07729 FCD domain ILQ33_05905 PF00324 Amino acid permease ILQ33_05910 PF00202 Aminotransferase class-III ILQ33_05915 PF00171 Aldehyde dehydrogenase family ILQ33_05920 PF01266 FAD dependent oxidoreductase ILQ33_05925 PF08943 CsiD ILQ33_05945 PF00239 Resolvase, N terminal domain ILQ33_05945 PF02796 Helix-turn-helix domain of resolvase ILQ33_06025 PF00149 Calcineurin-like phosphoesterase ILQ33_06045 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_06050 PF04971 Bacteriophage P21 holin S ILQ33_06055 PF07041 Protein of unknown function (DUF1327) ILQ33_06070 PF05717 IS66 Orf2 like protein ILQ33_06120 PF06183 DinI-like family ILQ33_06130 PF01668 SmpB protein ILQ33_06135 PF03364 Polyketide cyclase / dehydrase and lipid transport ILQ33_06140 PF03658 RnfH family Ubiquitin ILQ33_06145 PF04355 SmpA / OmlA family ILQ33_06150 PF02463 RecF/RecN/SMC N terminal domain ILQ33_06155 PF01513 ATP-NAD kinase ILQ33_06160 PF01025 GrpE ILQ33_06165 PF01595 Cyclin M transmembrane N-terminal domain ILQ33_06165 PF00571 CBS domain ILQ33_06165 PF03471 Transporter associated domain ILQ33_06170 PF01578 Cytochrome C assembly protein ILQ33_06175 PF00448 SRP54-type protein, GTPase domain ILQ33_06175 PF02881 SRP54-type protein, helical bundle domain ILQ33_06175 PF02978 Signal peptide binding domain ILQ33_06180 PF00886 Ribosomal protein S16 ILQ33_06185 PF01782 RimM N-terminal domain ILQ33_06185 PF05239 PRC-barrel domain ILQ33_06190 PF01746 tRNA (Guanine-1)-methyltransferase ILQ33_06195 PF01245 Ribosomal protein L19 ILQ33_06200 PF00691 OmpA family ILQ33_06205 PF17152 Periplasmic sensor domain ILQ33_06205 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_06210 PF13689 YfiR/HmsC-like ILQ33_06215 PF10973 Protein of unknown function (DUF2799) ILQ33_06220 PF00793 DAHP synthetase I family ILQ33_06225 PF02153 Prephenate dehydrogenase ILQ33_06225 PF01817 Chorismate mutase type II ILQ33_06230 PF00800 Prephenate dehydratase ILQ33_06230 PF01817 Chorismate mutase type II ILQ33_06240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ILQ33_06245 PF13525 Outer membrane lipoprotein ILQ33_06250 PF01479 S4 domain ILQ33_06250 PF00849 RNA pseudouridylate synthase ILQ33_06255 PF02578 Multi-copper polyphenol oxidoreductase laccase ILQ33_06260 PF02861 Clp amino terminal domain, pathogenicity island component ILQ33_06260 PF17871 AAA lid domain ILQ33_06260 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ33_06260 PF07724 AAA domain (Cdc48 subfamily) ILQ33_06260 PF00004 ATPase family associated with various cellular activities (AAA) ILQ33_06285 PF00083 Sugar (and other) transporter ILQ33_06290 PF10043 Predicted periplasmic lipoprotein (DUF2279) ILQ33_06295 PF13091 PLD-like domain ILQ33_06300 PF00583 Acetyltransferase (GNAT) family ILQ33_06300 PF13607 Succinyl-CoA ligase like flavodoxin domain ILQ33_06300 PF13380 CoA binding domain ILQ33_06305 PF03942 DTW domain ILQ33_06310 PF00085 Thioredoxin ILQ33_06315 PF00588 SpoU rRNA Methylase family ILQ33_06315 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILQ33_06320 PF03167 Uracil DNA glycosylase superfamily ILQ33_06325 PF01228 Glycine radical ILQ33_06330 PF01810 LysE type translocator ILQ33_06335 PF03466 LysR substrate binding domain ILQ33_06335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_06340 PF00271 Helicase conserved C-terminal domain ILQ33_06340 PF00270 DEAD/DEAH box helicase ILQ33_06345 PF05175 Methyltransferase small domain ILQ33_06350 PF00890 FAD binding domain ILQ33_06350 PF02910 Fumarate reductase flavoprotein C-term ILQ33_06360 PF04542 Sigma-70 region 2 ILQ33_06360 PF08281 Sigma-70, region 4 ILQ33_06365 PF03872 Anti sigma-E protein RseA, N-terminal domain ILQ33_06365 PF03873 Anti sigma-E protein RseA, C-terminal domain ILQ33_06370 PF17188 MucB/RseB C-terminal domain ILQ33_06370 PF03888 MucB/RseB N-terminal domain ILQ33_06380 PF03144 Elongation factor Tu domain 2 ILQ33_06380 PF00009 Elongation factor Tu GTP binding domain ILQ33_06380 PF06421 GTP-binding protein LepA C-terminus ILQ33_06380 PF00679 Elongation factor G C-terminus ILQ33_06385 PF10502 Signal peptidase, peptidase S26 ILQ33_06390 PF00035 Double-stranded RNA binding motif ILQ33_06390 PF14622 Ribonuclease-III-like ILQ33_06395 PF01926 50S ribosome-binding GTPase ILQ33_06395 PF07650 KH domain ILQ33_06400 PF11967 Recombination protein O N terminal ILQ33_06400 PF02565 Recombination protein O C terminal ILQ33_06405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ILQ33_06410 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ33_06420 PF12838 4Fe-4S dicluster domain ILQ33_06425 PF01380 SIS domain ILQ33_06425 PF01418 Helix-turn-helix domain, rpiR family ILQ33_06435 PF14437 MafB19-like deaminase ILQ33_06440 PF01464 Transglycosylase SLT domain ILQ33_06440 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_06445 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ILQ33_06445 PF02769 AIR synthase related protein, C-terminal domain ILQ33_06445 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ILQ33_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_06450 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_06455 PF13942 YfhG lipoprotein ILQ33_06460 PF00158 Sigma-54 interaction domain ILQ33_06460 PF00072 Response regulator receiver domain ILQ33_06465 PF00543 Nitrogen regulatory protein P-II ILQ33_06470 PF00175 Oxidoreductase NAD-binding domain ILQ33_06470 PF00042 Globin ILQ33_06470 PF00970 Oxidoreductase FAD-binding domain ILQ33_06475 PF00464 Serine hydroxymethyltransferase ILQ33_06480 PF00480 ROK family ILQ33_06485 PF13181 Tetratricopeptide repeat ILQ33_06485 PF17128 Domain of unknown function (DUF5107) ILQ33_06490 PF13407 Periplasmic binding protein domain ILQ33_06495 PF00005 ABC transporter ILQ33_06500 PF02653 Branched-chain amino acid transport system / permease component ILQ33_06505 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_06505 PF00107 Zinc-binding dehydrogenase ILQ33_06510 PF00107 Zinc-binding dehydrogenase ILQ33_06510 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_06515 PF01263 Aldose 1-epimerase ILQ33_06520 PF07681 DoxX ILQ33_06525 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_06525 PF14759 Reductase C-terminal ILQ33_06530 PF00106 short chain dehydrogenase ILQ33_06535 PF00355 Rieske [2Fe-2S] domain ILQ33_06540 PF00866 Ring hydroxylating beta subunit ILQ33_06545 PF00355 Rieske [2Fe-2S] domain ILQ33_06545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILQ33_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_06550 PF03466 LysR substrate binding domain ILQ33_06555 PF12832 MFS_1 like family ILQ33_06560 PF00874 PRD domain ILQ33_06565 PF12146 Serine aminopeptidase, S33 ILQ33_06570 PF00459 Inositol monophosphatase family ILQ33_06575 PF00588 SpoU rRNA Methylase family ILQ33_06580 PF02082 Transcriptional regulator ILQ33_06585 PF00266 Aminotransferase class-V ILQ33_06590 PF01592 NifU-like N terminal domain ILQ33_06595 PF01521 Iron-sulphur cluster biosynthesis ILQ33_06600 PF07743 HSCB C-terminal oligomerisation domain ILQ33_06605 PF00012 Hsp70 protein ILQ33_06610 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ33_06615 PF04384 Iron-sulphur cluster assembly ILQ33_06620 PF12404 Peptidase ILQ33_06620 PF00883 Cytosol aminopeptidase family, catalytic domain ILQ33_06625 PF14581 SseB protein C-terminal domain ILQ33_06625 PF07179 SseB protein N-terminal domain ILQ33_06630 PF00581 Rhodanese-like domain ILQ33_06635 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ILQ33_06635 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ILQ33_06635 PF07678 A-macroglobulin TED domain ILQ33_06635 PF01835 MG2 domain ILQ33_06635 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ILQ33_06635 PF07703 Alpha-2-macroglobulin bait region domain ILQ33_06635 PF17962 Bacterial macroglobulin domain 6 ILQ33_06635 PF00207 Alpha-2-macroglobulin family ILQ33_06635 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ILQ33_06640 PF06832 Penicillin-Binding Protein C-terminus Family ILQ33_06640 PF00912 Transglycosylase ILQ33_06640 PF00905 Penicillin binding protein transpeptidase domain ILQ33_06645 PF00384 Molybdopterin oxidoreductase ILQ33_06645 PF01568 Molydopterin dinucleotide binding domain ILQ33_06645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ33_06650 PF13247 4Fe-4S dicluster domain ILQ33_06650 PF12800 4Fe-4S binding domain ILQ33_06655 PF04976 DMSO reductase anchor subunit (DmsC) ILQ33_06665 PF00334 Nucleoside diphosphate kinase ILQ33_06670 PF04055 Radical SAM superfamily ILQ33_06675 PF13464 Domain of unknown function (DUF4115) ILQ33_06680 PF04551 GcpE protein ILQ33_06685 PF03129 Anticodon binding domain ILQ33_06685 PF13393 Histidyl-tRNA synthetase ILQ33_06690 PF09976 Tetratricopeptide repeat-like domain ILQ33_06695 PF13360 PQQ-like domain ILQ33_06700 PF01926 50S ribosome-binding GTPase ILQ33_06700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ILQ33_06705 PF07191 zinc-ribbons ILQ33_06710 PF13742 OB-fold nucleic acid binding domain ILQ33_06710 PF02601 Exonuclease VII, large subunit ILQ33_06715 PF00478 IMP dehydrogenase / GMP reductase domain ILQ33_06715 PF00571 CBS domain ILQ33_06720 PF00958 GMP synthase C terminal domain ILQ33_06720 PF02540 NAD synthase ILQ33_06720 PF00117 Glutamine amidotransferase class-I ILQ33_06725 PF17358 Family of unknown function (DUF5384) ILQ33_06730 PF05433 Glycine zipper 2TM domain ILQ33_06735 PF11119 Protein of unknown function (DUF2633) ILQ33_06745 PF00563 EAL domain ILQ33_06745 PF05231 MASE1 ILQ33_06750 PF02541 Ppx/GppA phosphatase family ILQ33_06755 PF13089 Polyphosphate kinase N-terminal domain ILQ33_06755 PF02503 Polyphosphate kinase middle domain ILQ33_06755 PF13090 Polyphosphate kinase C-terminal domain 2 ILQ33_06755 PF17941 Polyphosphate kinase C-terminal domain 1 ILQ33_06760 PF00551 Formyl transferase ILQ33_06765 PF02769 AIR synthase related protein, C-terminal domain ILQ33_06765 PF00586 AIR synthase related protein, N-terminal domain ILQ33_06775 PF00860 Permease family ILQ33_06780 PF00308 Bacterial dnaA protein ILQ33_06785 PF03960 ArsC family ILQ33_06790 PF01435 Peptidase family M48 ILQ33_06795 PF01594 AI-2E family transporter ILQ33_06800 PF01226 Formate/nitrite transporter ILQ33_06805 PF00158 Sigma-54 interaction domain ILQ33_06805 PF01590 GAF domain ILQ33_06810 PF07450 Formate hydrogenlyase maturation protein HycH ILQ33_06815 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ33_06820 PF12838 4Fe-4S dicluster domain ILQ33_06825 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILQ33_06825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILQ33_06825 PF00374 Nickel-dependent hydrogenase ILQ33_06830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILQ33_06830 PF00361 Proton-conducting membrane transporter ILQ33_06835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILQ33_06840 PF00361 Proton-conducting membrane transporter ILQ33_06840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILQ33_06845 PF00146 NADH dehydrogenase ILQ33_06855 PF12798 4Fe-4S binding domain ILQ33_06855 PF00037 4Fe-4S binding domain ILQ33_06860 PF00578 AhpC/TSA family ILQ33_06865 PF01842 ACT domain ILQ33_06870 PF00701 Dihydrodipicolinate synthetase family ILQ33_06875 PF06804 NlpB/DapX lipoprotein ILQ33_06880 PF01259 SAICAR synthetase ILQ33_06885 PF04228 Putative neutral zinc metallopeptidase ILQ33_06890 PF17176 tRNA-binding domain ILQ33_06890 PF05127 Helicase ILQ33_06890 PF13718 GNAT acetyltransferase 2 ILQ33_06890 PF08351 Domain of unknown function (DUF1726) ILQ33_06895 PF02230 Phospholipase/Carboxylesterase ILQ33_06900 PF13980 Uncharacterised protein family (UPF0370) ILQ33_06905 PF07687 Peptidase dimerisation domain ILQ33_06905 PF01546 Peptidase family M20/M25/M40 ILQ33_06910 PF03960 ArsC family ILQ33_06920 PF00873 AcrB/AcrD/AcrF family ILQ33_06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_06925 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ILQ33_06925 PF07730 Histidine kinase ILQ33_06925 PF00672 HAMP domain ILQ33_06930 PF13247 4Fe-4S dicluster domain ILQ33_06930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ33_06930 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_06935 PF00293 NUDIX domain ILQ33_06940 PF06674 Protein of unknown function (DUF1176) ILQ33_06945 PF00456 Transketolase, thiamine diphosphate binding domain ILQ33_06945 PF02780 Transketolase, C-terminal domain ILQ33_06945 PF02779 Transketolase, pyrimidine binding domain ILQ33_06950 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ33_06955 PF00390 Malic enzyme, N-terminal domain ILQ33_06955 PF03949 Malic enzyme, NAD binding domain ILQ33_06955 PF01515 Phosphate acetyl/butaryl transferase ILQ33_06960 PF00936 BMC domain ILQ33_06965 PF10662 Ethanolamine utilisation - propanediol utilisation ILQ33_06970 PF06249 Ethanolamine utilisation protein EutQ ILQ33_06975 PF01923 Cobalamin adenosyltransferase ILQ33_06980 PF01515 Phosphate acetyl/butaryl transferase ILQ33_06985 PF00936 BMC domain ILQ33_06990 PF03319 Ethanolamine utilisation protein EutN/carboxysome ILQ33_06995 PF00171 Aldehyde dehydrogenase family ILQ33_07005 PF00465 Iron-containing alcohol dehydrogenase ILQ33_07010 PF04346 Ethanolamine utilisation protein, EutH ILQ33_07015 PF06277 Ethanolamine utilisation protein EutA ILQ33_07020 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ILQ33_07025 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ILQ33_07030 PF00936 BMC domain ILQ33_07035 PF00936 BMC domain ILQ33_07035 PF16365 Ethanolamine utilization protein EutK C-terminus ILQ33_07040 PF12833 Helix-turn-helix domain ILQ33_07045 PF01218 Coproporphyrinogen III oxidase ILQ33_07050 PF01520 N-acetylmuramoyl-L-alanine amidase ILQ33_07055 PF00583 Acetyltransferase (GNAT) family ILQ33_07060 PF11143 Protein of unknown function (DUF2919) ILQ33_07065 PF06572 Protein of unknown function (DUF1131) ILQ33_07070 PF04261 Dyp-type peroxidase family ILQ33_07075 PF00144 Beta-lactamase ILQ33_07080 PF02378 Phosphotransferase system, EIIC ILQ33_07080 PF00367 phosphotransferase system, EIIB ILQ33_07085 PF01380 SIS domain ILQ33_07090 PF01380 SIS domain ILQ33_07090 PF01418 Helix-turn-helix domain, rpiR family ILQ33_07105 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_07110 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_07115 PF00005 ABC transporter ILQ33_07120 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_07130 PF08543 Phosphomethylpyrimidine kinase ILQ33_07135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ILQ33_07140 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ33_07140 PF00391 PEP-utilising enzyme, mobile domain ILQ33_07140 PF05524 PEP-utilising enzyme, N-terminal ILQ33_07145 PF00381 PTS HPr component phosphorylation site ILQ33_07150 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_07160 PF04354 ZipA, C-terminal FtsZ-binding domain ILQ33_07165 PF12826 Helix-hairpin-helix motif ILQ33_07165 PF01653 NAD-dependent DNA ligase adenylation domain ILQ33_07165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ILQ33_07165 PF00533 BRCA1 C Terminus (BRCT) domain ILQ33_07165 PF03120 NAD-dependent DNA ligase OB-fold domain ILQ33_07170 PF12843 Putative quorum-sensing-regulated virulence factor ILQ33_07175 PF13593 SBF-like CPA transporter family (DUF4137) ILQ33_07180 PF03466 LysR substrate binding domain ILQ33_07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_07210 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILQ33_07225 PF13007 Transposase C of IS166 homeodomain ILQ33_07225 PF03050 Transposase IS66 family ILQ33_07225 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_07225 PF13817 IS66 C-terminal element ILQ33_07230 PF05717 IS66 Orf2 like protein ILQ33_07245 PF07037 Putative transcription regulator (DUF1323) ILQ33_07250 PF07037 Putative transcription regulator (DUF1323) ILQ33_07265 PF05231 MASE1 ILQ33_07265 PF00563 EAL domain ILQ33_07270 PF07662 Na+ dependent nucleoside transporter C-terminus ILQ33_07270 PF01773 Na+ dependent nucleoside transporter N-terminus ILQ33_07270 PF07670 Nucleoside recognition ILQ33_07275 PF01566 Natural resistance-associated macrophage protein ILQ33_07280 PF10697 Protein of unknown function (DUF2502) ILQ33_07285 PF00654 Voltage gated chloride channel ILQ33_07290 PF02685 Glucokinase ILQ33_07295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_07300 PF02378 Phosphotransferase system, EIIC ILQ33_07305 PF00557 Metallopeptidase family M24 ILQ33_07305 PF01321 Creatinase/Prolidase N-terminal domain ILQ33_07310 PF05343 M42 glutamyl aminopeptidase ILQ33_07315 PF00391 PEP-utilising enzyme, mobile domain ILQ33_07315 PF00381 PTS HPr component phosphorylation site ILQ33_07315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_07315 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ33_07315 PF05524 PEP-utilising enzyme, N-terminal ILQ33_07320 PF12833 Helix-turn-helix domain ILQ33_07325 PF04397 LytTr DNA-binding domain ILQ33_07325 PF00072 Response regulator receiver domain ILQ33_07330 PF06580 Histidine kinase ILQ33_07330 PF07694 5TMR of 5TMR-LYT ILQ33_07330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_07335 PF00155 Aminotransferase class I and II ILQ33_07345 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ33_07350 PF10810 Protein of unknown function (DUF2545) ILQ33_07360 PF10938 YfdX protein ILQ33_07365 PF02515 CoA-transferase family III ILQ33_07370 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ33_07370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ33_07370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_07375 PF03547 Membrane transport protein ILQ33_07385 PF00072 Response regulator receiver domain ILQ33_07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_07385 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_07390 PF00072 Response regulator receiver domain ILQ33_07390 PF00196 Bacterial regulatory proteins, luxR family ILQ33_07395 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_07395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_07400 PF07690 Major Facilitator Superfamily ILQ33_07405 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_07415 PF00356 Bacterial regulatory proteins, lacI family ILQ33_07415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ33_07420 PF00251 Glycosyl hydrolases family 32 N-terminal domain ILQ33_07420 PF08244 Glycosyl hydrolases family 32 C terminal ILQ33_07425 PF00294 pfkB family carbohydrate kinase ILQ33_07430 PF01306 LacY proton/sugar symporter ILQ33_07435 PF00239 Resolvase, N terminal domain ILQ33_07435 PF02796 Helix-turn-helix domain of resolvase ILQ33_07475 PF14659 Phage integrase, N-terminal SAM-like domain ILQ33_07475 PF13356 Arm DNA-binding domain ILQ33_07475 PF00589 Phage integrase family ILQ33_07610 PF03793 PASTA domain ILQ33_07610 PF00069 Protein kinase domain ILQ33_07700 PF06530 Phage antitermination protein Q ILQ33_07720 PF00161 Ribosome inactivating protein ILQ33_07725 PF02258 Shiga-like toxin beta subunit ILQ33_07730 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_07745 PF04971 Bacteriophage P21 holin S ILQ33_07750 PF00959 Phage lysozyme ILQ33_07765 PF06085 Lipoprotein Rz1 precursor ILQ33_07770 PF06291 Bor protein ILQ33_07865 PF13505 Outer membrane protein beta-barrel domain ILQ33_07905 PF01226 Formate/nitrite transporter ILQ33_07910 PF04333 MlaA lipoprotein ILQ33_07920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ILQ33_07925 PF04175 Protein of unknown function (DUF406) ILQ33_07930 PF02803 Thiolase, C-terminal domain ILQ33_07930 PF00108 Thiolase, N-terminal domain ILQ33_07935 PF00378 Enoyl-CoA hydratase/isomerase ILQ33_07935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILQ33_07935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILQ33_07940 PF00300 Histidine phosphatase superfamily (branch 1) ILQ33_07945 PF00419 Fimbrial protein ILQ33_07950 PF13953 PapC C-terminal domain ILQ33_07950 PF00577 Outer membrane usher protein ILQ33_07950 PF13954 PapC N-terminal domain ILQ33_07955 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_07955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_07960 PF00419 Fimbrial protein ILQ33_07965 PF00419 Fimbrial protein ILQ33_07970 PF00419 Fimbrial protein ILQ33_07975 PF11245 Protein of unknown function (DUF2544) ILQ33_07980 PF01713 Smr domain ILQ33_07985 PF05175 Methyltransferase small domain ILQ33_07990 PF01264 Chorismate synthase ILQ33_07995 PF03411 Penicillin-insensitive murein endopeptidase ILQ33_08000 PF01925 Sulfite exporter TauE/SafE ILQ33_08005 PF04315 Elongation factor P hydroxylase ILQ33_08010 PF08891 YfcL protein ILQ33_08015 PF01266 FAD dependent oxidoreductase ILQ33_08015 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ILQ33_08020 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ33_08020 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ33_08025 PF07690 Major Facilitator Superfamily ILQ33_08035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ33_08035 PF11890 Domain of unknown function (DUF3410) ILQ33_08035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ33_08040 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILQ33_08040 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ33_08045 PF01416 tRNA pseudouridine synthase ILQ33_08050 PF09335 SNARE associated Golgi protein ILQ33_08055 PF17848 Acetyl-coA carboxylase zinc finger domain ILQ33_08055 PF01039 Carboxyl transferase domain ILQ33_08060 PF02875 Mur ligase family, glutamate ligase domain ILQ33_08060 PF08245 Mur ligase middle domain ILQ33_08065 PF05036 Sporulation related domain ILQ33_08070 PF02674 Colicin V production protein ILQ33_08075 PF00156 Phosphoribosyl transferase domain ILQ33_08080 PF02441 Flavoprotein ILQ33_08085 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_08090 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_08095 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_08100 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_08105 PF00005 ABC transporter ILQ33_08110 PF04754 Putative transposase, YhgA-like ILQ33_08115 PF08338 Domain of unknown function (DUF1731) ILQ33_08115 PF01370 NAD dependent epimerase/dehydratase family ILQ33_08120 PF02152 Dihydroneopterin aldolase ILQ33_08125 PF00043 Glutathione S-transferase, C-terminal domain ILQ33_08125 PF02798 Glutathione S-transferase, N-terminal domain ILQ33_08130 PF14834 Glutathione S-transferase, C-terminal domain ILQ33_08130 PF02798 Glutathione S-transferase, N-terminal domain ILQ33_08135 PF12850 Calcineurin-like phosphoesterase superfamily domain ILQ33_08140 PF00293 NUDIX domain ILQ33_08145 PF03606 C4-dicarboxylate anaerobic carrier ILQ33_08150 PF01515 Phosphate acetyl/butaryl transferase ILQ33_08150 PF07085 DRTGG domain ILQ33_08155 PF00871 Acetokinase family ILQ33_08160 PF04217 Protein of unknown function, DUF412 ILQ33_08165 PF03887 YfbU domain ILQ33_08170 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_08175 PF02080 TrkA-C domain ILQ33_08175 PF03600 Citrate transporter ILQ33_08185 PF00155 Aminotransferase class I and II ILQ33_08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_08190 PF03466 LysR substrate binding domain ILQ33_08195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ILQ33_08200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ33_08205 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILQ33_08205 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILQ33_08215 PF10531 SLBB domain ILQ33_08215 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ILQ33_08215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ILQ33_08220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ33_08220 PF00384 Molybdopterin oxidoreductase ILQ33_08220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ILQ33_08220 PF01568 Molydopterin dinucleotide binding domain ILQ33_08225 PF00146 NADH dehydrogenase ILQ33_08230 PF12838 4Fe-4S dicluster domain ILQ33_08235 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ILQ33_08240 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILQ33_08245 PF00361 Proton-conducting membrane transporter ILQ33_08245 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILQ33_08250 PF00361 Proton-conducting membrane transporter ILQ33_08255 PF00361 Proton-conducting membrane transporter ILQ33_08260 PF08974 Domain of unknown function (DUF1877) ILQ33_08270 PF02902 Ulp1 protease family, C-terminal catalytic domain ILQ33_08275 PF12706 Beta-lactamase superfamily domain ILQ33_08280 PF13673 Acetyltransferase (GNAT) domain ILQ33_08285 PF05957 Bacterial protein of unknown function (DUF883) ILQ33_08290 PF00425 chorismate binding enzyme ILQ33_08295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ33_08295 PF16582 Middle domain of thiamine pyrophosphate ILQ33_08295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_08300 PF12697 Alpha/beta hydrolase family ILQ33_08305 PF00378 Enoyl-CoA hydratase/isomerase ILQ33_08310 PF13378 Enolase C-terminal domain-like ILQ33_08315 PF00501 AMP-binding enzyme ILQ33_08315 PF13193 AMP-binding enzyme C-terminal domain ILQ33_08330 PF00892 EamA-like transporter family ILQ33_08335 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ILQ33_08340 PF01522 Polysaccharide deacetylase ILQ33_08345 PF00551 Formyl transferase ILQ33_08345 PF02911 Formyl transferase, C-terminal domain ILQ33_08345 PF01370 NAD dependent epimerase/dehydratase family ILQ33_08350 PF00535 Glycosyl transferase family 2 ILQ33_08355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILQ33_08360 PF00300 Histidine phosphatase superfamily (branch 1) ILQ33_08365 PF00293 NUDIX domain ILQ33_08370 PF07437 YfaZ precursor ILQ33_08375 PF00994 Probable molybdopterin binding domain ILQ33_08380 PF09339 IclR helix-turn-helix domain ILQ33_08380 PF01614 Bacterial transcriptional regulator ILQ33_08385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ILQ33_08385 PF13378 Enolase C-terminal domain-like ILQ33_08390 PF07690 Major Facilitator Superfamily ILQ33_08395 PF03328 HpcH/HpaI aldolase/citrate lyase family ILQ33_08400 PF04754 Putative transposase, YhgA-like ILQ33_08405 PF13183 4Fe-4S dicluster domain ILQ33_08405 PF02754 Cysteine-rich domain ILQ33_08410 PF00890 FAD binding domain ILQ33_08415 PF01266 FAD dependent oxidoreductase ILQ33_08415 PF04324 BFD-like [2Fe-2S] binding domain ILQ33_08420 PF07690 Major Facilitator Superfamily ILQ33_08425 PF03009 Glycerophosphoryl diester phosphodiesterase family ILQ33_08435 PF03466 LysR substrate binding domain ILQ33_08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_08440 PF07690 Major Facilitator Superfamily ILQ33_08450 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ33_08455 PF00268 Ribonucleotide reductase, small chain ILQ33_08460 PF00317 Ribonucleotide reductase, all-alpha domain ILQ33_08460 PF03477 ATP cone domain ILQ33_08460 PF02867 Ribonucleotide reductase, barrel domain ILQ33_08465 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat ILQ33_08465 PF12951 Passenger-associated-transport-repeat ILQ33_08465 PF03797 Autotransporter beta-domain ILQ33_08475 PF00521 DNA gyrase/topoisomerase IV, subunit A ILQ33_08475 PF03989 DNA gyrase C-terminal domain, beta-propeller ILQ33_08480 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) ILQ33_08485 PF06672 Protein of unknown function (DUF1175) ILQ33_08490 PF00207 Alpha-2-macroglobulin family ILQ33_08490 PF01835 MG2 domain ILQ33_08490 PF07703 Alpha-2-macroglobulin bait region domain ILQ33_08495 PF10062 Predicted secreted protein (DUF2300) ILQ33_08495 PF08486 Stage II sporulation protein ILQ33_08500 PF10062 Predicted secreted protein (DUF2300) ILQ33_08500 PF08486 Stage II sporulation protein ILQ33_08505 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) ILQ33_08510 PF09456 RcsC Alpha-Beta-Loop (ABL) ILQ33_08510 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_08510 PF00072 Response regulator receiver domain ILQ33_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_08515 PF00072 Response regulator receiver domain ILQ33_08515 PF00196 Bacterial regulatory proteins, luxR family ILQ33_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_08520 PF01627 Hpt domain ILQ33_08520 PF16359 RcsD-ABL domain ILQ33_08525 PF00267 Gram-negative porin ILQ33_08530 PF02424 ApbE family ILQ33_08535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILQ33_08535 PF02805 Metal binding domain of Ada ILQ33_08535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILQ33_08535 PF12833 Helix-turn-helix domain ILQ33_08540 PF13532 2OG-Fe(II) oxygenase superfamily ILQ33_08545 PF00005 ABC transporter ILQ33_08550 PF06039 Malate:quinone oxidoreductase (Mqo) ILQ33_08555 PF03974 Ecotin ILQ33_08560 PF00037 4Fe-4S binding domain ILQ33_08560 PF13187 4Fe-4S dicluster domain ILQ33_08560 PF12800 4Fe-4S binding domain ILQ33_08565 PF03927 NapD protein ILQ33_08570 PF00384 Molybdopterin oxidoreductase ILQ33_08570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ33_08570 PF01568 Molydopterin dinucleotide binding domain ILQ33_08575 PF12838 4Fe-4S dicluster domain ILQ33_08575 PF12800 4Fe-4S binding domain ILQ33_08580 PF12801 4Fe-4S binding domain ILQ33_08580 PF13237 4Fe-4S dicluster domain ILQ33_08585 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ILQ33_08590 PF03264 NapC/NirT cytochrome c family, N-terminal region ILQ33_08595 PF00005 ABC transporter ILQ33_08600 PF03379 CcmB protein ILQ33_08605 PF01578 Cytochrome C assembly protein ILQ33_08610 PF04995 Heme exporter protein D (CcmD) ILQ33_08615 PF03100 CcmE ILQ33_08620 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ILQ33_08620 PF01578 Cytochrome C assembly protein ILQ33_08625 PF08534 Redoxin ILQ33_08630 PF03918 Cytochrome C biogenesis protein ILQ33_08635 PF00196 Bacterial regulatory proteins, luxR family ILQ33_08635 PF00072 Response regulator receiver domain ILQ33_08640 PF03797 Autotransporter beta-domain ILQ33_08640 PF03212 Pertactin ILQ33_08640 PF16168 Adhesin of bacterial autotransporter system, probable stalk ILQ33_08650 PF11893 Domain of unknown function (DUF3413) ILQ33_08650 PF00884 Sulfatase ILQ33_08655 PF07208 Protein of unknown function (DUF1414) ILQ33_08660 PF04245 37-kD nucleoid-associated bacterial protein ILQ33_08665 PF01386 Ribosomal L25p family ILQ33_08670 PF04851 Type III restriction enzyme, res subunit ILQ33_08670 PF00271 Helicase conserved C-terminal domain ILQ33_08675 PF00849 RNA pseudouridylate synthase ILQ33_08675 PF01479 S4 domain ILQ33_08680 PF07690 Major Facilitator Superfamily ILQ33_08685 PF13989 YejG-like protein ILQ33_08690 PF00005 ABC transporter ILQ33_08690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_08695 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ33_08695 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_08700 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_08705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_08710 PF12792 CSS motif domain associated with EAL ILQ33_08710 PF00563 EAL domain ILQ33_08715 PF00877 NlpC/P60 family ILQ33_08720 PF01569 PAP2 superfamily ILQ33_08725 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ33_08725 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILQ33_08730 PF01232 Mannitol dehydrogenase Rossmann domain ILQ33_08730 PF08125 Mannitol dehydrogenase C-terminal domain ILQ33_08735 PF09285 Elongation factor P, C-terminal ILQ33_08735 PF01132 Elongation factor P (EF-P) OB domain ILQ33_08735 PF08207 Elongation factor P (EF-P) KOW-like domain ILQ33_08740 PF03692 Putative zinc- or iron-chelating domain ILQ33_08745 PF07690 Major Facilitator Superfamily ILQ33_08750 PF00381 PTS HPr component phosphorylation site ILQ33_08750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_08755 PF00294 pfkB family carbohydrate kinase ILQ33_08760 PF02378 Phosphotransferase system, EIIC ILQ33_08760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_08765 PF00294 pfkB family carbohydrate kinase ILQ33_08770 PF04227 Indigoidine synthase A like protein ILQ33_08775 PF01773 Na+ dependent nucleoside transporter N-terminus ILQ33_08775 PF07662 Na+ dependent nucleoside transporter C-terminus ILQ33_08780 PF00027 Cyclic nucleotide-binding domain ILQ33_08785 PF01156 Inosine-uridine preferring nucleoside hydrolase ILQ33_08790 PF07662 Na+ dependent nucleoside transporter C-terminus ILQ33_08790 PF01773 Na+ dependent nucleoside transporter N-terminus ILQ33_08795 PF00294 pfkB family carbohydrate kinase ILQ33_08800 PF01261 Xylose isomerase-like TIM barrel ILQ33_08805 PF03601 Conserved hypothetical protein 698 ILQ33_08810 PF03466 LysR substrate binding domain ILQ33_08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_08815 PF00324 Amino acid permease ILQ33_08820 PF00593 TonB dependent receptor ILQ33_08820 PF07715 TonB-dependent Receptor Plug Domain ILQ33_08825 PF00756 Putative esterase ILQ33_08830 PF01227 GTP cyclohydrolase I ILQ33_08835 PF04235 Protein of unknown function (DUF418) ILQ33_08840 PF00356 Bacterial regulatory proteins, lacI family ILQ33_08845 PF13407 Periplasmic binding protein domain ILQ33_08850 PF00005 ABC transporter ILQ33_08855 PF02653 Branched-chain amino acid transport system / permease component ILQ33_08860 PF01180 Dihydroorotate dehydrogenase ILQ33_08865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ33_08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_08870 PF10808 Protein of unknown function (DUF2542) ILQ33_08875 PF02698 DUF218 domain ILQ33_08880 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ILQ33_08880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILQ33_08885 PF04172 LrgB-like family ILQ33_08890 PF03788 LrgA family ILQ33_08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_08895 PF03466 LysR substrate binding domain ILQ33_08900 PF07690 Major Facilitator Superfamily ILQ33_08905 PF07883 Cupin domain ILQ33_08910 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILQ33_08915 PF02798 Glutathione S-transferase, N-terminal domain ILQ33_08915 PF14497 Glutathione S-transferase, C-terminal domain ILQ33_08920 PF01494 FAD binding domain ILQ33_08925 PF01207 Dihydrouridine synthase (Dus) ILQ33_08935 PF02321 Outer membrane efflux protein ILQ33_08945 PF09335 SNARE associated Golgi protein ILQ33_08950 PF04893 Yip1 domain ILQ33_08955 PF00768 D-alanyl-D-alanine carboxypeptidase ILQ33_08960 PF01565 FAD binding domain ILQ33_08960 PF09330 D-lactate dehydrogenase, membrane binding ILQ33_08965 PF14310 Fibronectin type III-like domain ILQ33_08965 PF01915 Glycosyl hydrolase family 3 C-terminal domain ILQ33_08965 PF00933 Glycosyl hydrolase family 3 N terminal domain ILQ33_08970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILQ33_08975 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_08980 PF00005 ABC transporter ILQ33_08985 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_08995 PF13411 MerR HTH family regulatory protein ILQ33_09095 PF01381 Helix-turn-helix ILQ33_09095 PF00717 Peptidase S24-like ILQ33_09115 PF06992 Replication protein P ILQ33_09160 PF07102 Protein of unknown function (DUF1364) ILQ33_09165 PF05866 Endodeoxyribonuclease RusA ILQ33_09175 PF06530 Phage antitermination protein Q ILQ33_09200 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_09215 PF04971 Bacteriophage P21 holin S ILQ33_09220 PF00959 Phage lysozyme ILQ33_09265 PF00574 Clp protease ILQ33_09335 PF06316 Enterobacterial Ail/Lom protein ILQ33_09340 PF08400 Prophage tail fibre N-terminal ILQ33_09340 PF03335 Phage tail fibre repeat ILQ33_09340 PF07484 Phage Tail Collar Domain ILQ33_09350 PF06183 DinI-like family ILQ33_09355 PF06580 Histidine kinase ILQ33_09355 PF07694 5TMR of 5TMR-LYT ILQ33_09360 PF00072 Response regulator receiver domain ILQ33_09360 PF04397 LytTr DNA-binding domain ILQ33_09365 PF07308 Protein of unknown function (DUF1456) ILQ33_09370 PF06998 Protein of unknown function (DUF1307) ILQ33_09380 PF05762 VWA domain containing CoxE-like protein ILQ33_09395 PF07728 AAA domain (dynein-related subfamily) ILQ33_09405 PF13569 Domain of unknown function (DUF4132) ILQ33_09420 PF01588 Putative tRNA binding domain ILQ33_09420 PF09334 tRNA synthetases class I (M) ILQ33_09425 PF10609 NUBPL iron-transfer P-loop NTPase ILQ33_09430 PF10836 Protein of unknown function (DUF2574) ILQ33_09435 PF00419 Fimbrial protein ILQ33_09440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_09440 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_09450 PF00419 Fimbrial protein ILQ33_09455 PF11776 Nickel/cobalt transporter regulator ILQ33_09460 PF03824 High-affinity nickel-transport protein ILQ33_09465 PF02583 Metal-sensitive transcriptional repressor ILQ33_09485 PF02110 Hydroxyethylthiazole kinase family ILQ33_09490 PF08543 Phosphomethylpyrimidine kinase ILQ33_09495 PF01183 Glycosyl hydrolases family 25 ILQ33_09500 PF07702 UTRA domain ILQ33_09500 PF00392 Bacterial regulatory proteins, gntR family ILQ33_09505 PF00294 pfkB family carbohydrate kinase ILQ33_09510 PF03747 ADP-ribosylglycohydrolase ILQ33_09515 PF03825 Nucleoside H+ symporter ILQ33_09520 PF01791 DeoC/LacD family aldolase ILQ33_09525 PF01116 Fructose-bisphosphate aldolase class-II ILQ33_09530 PF08013 Tagatose 6 phosphate kinase ILQ33_09535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_09540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_09545 PF03611 PTS system sugar-specific permease component ILQ33_09550 PF00107 Zinc-binding dehydrogenase ILQ33_09550 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_09555 PF08220 DeoR-like helix-turn-helix domain ILQ33_09560 PF00781 Diacylglycerol kinase catalytic domain ILQ33_09570 PF16325 Peptidase family U32 C-terminal domain ILQ33_09570 PF01136 Peptidase family U32 ILQ33_09575 PF07411 Domain of unknown function (DUF1508) ILQ33_09580 PF00486 Transcriptional regulatory protein, C terminal ILQ33_09580 PF00072 Response regulator receiver domain ILQ33_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_09585 PF00672 HAMP domain ILQ33_09585 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_09590 PF07690 Major Facilitator Superfamily ILQ33_09595 PF00873 AcrB/AcrD/AcrF family ILQ33_09600 PF00873 AcrB/AcrD/AcrF family ILQ33_09605 PF13533 Biotin-lipoyl like ILQ33_09625 PF00092 von Willebrand factor type A domain ILQ33_09640 PF00012 Hsp70 protein ILQ33_09645 PF06029 AlkA N-terminal domain ILQ33_09645 PF00730 HhH-GPD superfamily base excision DNA repair protein ILQ33_09655 PF00485 Phosphoribulokinase / Uridine kinase family ILQ33_09660 PF00692 dUTPase ILQ33_09665 PF05170 AsmA family ILQ33_09680 PF03741 Integral membrane protein TerC family ILQ33_09680 PF03471 Transporter associated domain ILQ33_09680 PF00571 CBS domain ILQ33_09690 PF10531 SLBB domain ILQ33_09690 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ILQ33_09690 PF02563 Polysaccharide biosynthesis/export protein ILQ33_09695 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILQ33_09700 PF13614 AAA domain ILQ33_09700 PF02706 Chain length determinant protein ILQ33_09700 PF13807 G-rich domain on putative tyrosine kinase ILQ33_09705 PF00535 Glycosyl transferase family 2 ILQ33_09710 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_09715 PF13439 Glycosyltransferase Family 4 ILQ33_09715 PF00534 Glycosyl transferases group 1 ILQ33_09725 PF00535 Glycosyl transferase family 2 ILQ33_09730 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_09735 PF16363 GDP-mannose 4,6 dehydratase ILQ33_09740 PF01370 NAD dependent epimerase/dehydratase family ILQ33_09745 PF00293 NUDIX domain ILQ33_09750 PF13579 Glycosyl transferase 4-like domain ILQ33_09750 PF00534 Glycosyl transferases group 1 ILQ33_09755 PF01050 Mannose-6-phosphate isomerase ILQ33_09755 PF00483 Nucleotidyl transferase ILQ33_09760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ33_09760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ33_09760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ33_09760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ33_09765 PF02397 Bacterial sugar transferase ILQ33_09775 PF04230 Polysaccharide pyruvyl transferase ILQ33_09780 PF00534 Glycosyl transferases group 1 ILQ33_09780 PF13439 Glycosyltransferase Family 4 ILQ33_09790 PF01370 NAD dependent epimerase/dehydratase family ILQ33_09795 PF00483 Nucleotidyl transferase ILQ33_09800 PF00535 Glycosyl transferase family 2 ILQ33_09810 PF00535 Glycosyl transferase family 2 ILQ33_09820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILQ33_09830 PF16363 GDP-mannose 4,6 dehydratase ILQ33_09835 PF01370 NAD dependent epimerase/dehydratase family ILQ33_09840 PF00293 NUDIX domain ILQ33_09845 PF00483 Nucleotidyl transferase ILQ33_09845 PF01050 Mannose-6-phosphate isomerase ILQ33_09850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ33_09850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ33_09850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ33_09850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ33_09855 PF14602 Hexapeptide repeat of succinyl-transferase ILQ33_09855 PF17836 PglD N-terminal domain ILQ33_09855 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_09860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ33_09860 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ILQ33_09865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILQ33_09865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILQ33_09865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILQ33_09870 PF02706 Chain length determinant protein ILQ33_09875 PF01502 Phosphoribosyl-AMP cyclohydrolase ILQ33_09875 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ILQ33_09880 PF00977 Histidine biosynthesis protein ILQ33_09885 PF00977 Histidine biosynthesis protein ILQ33_09890 PF00117 Glutamine amidotransferase class-I ILQ33_09895 PF00475 Imidazoleglycerol-phosphate dehydratase ILQ33_09895 PF08645 Polynucleotide kinase 3 phosphatase ILQ33_09900 PF00155 Aminotransferase class I and II ILQ33_09905 PF00815 Histidinol dehydrogenase ILQ33_09910 PF08029 HisG, C-terminal domain ILQ33_09910 PF01634 ATP phosphoribosyltransferase ILQ33_09920 PF01370 NAD dependent epimerase/dehydratase family ILQ33_09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_09925 PF03466 LysR substrate binding domain ILQ33_09935 PF13520 Amino acid permease ILQ33_09940 PF04143 Sulphur transport ILQ33_09945 PF01206 Sulfurtransferase TusA ILQ33_09950 PF00929 Exonuclease ILQ33_09950 PF08411 Exonuclease C-terminal ILQ33_10050 PF10800 Protein of unknown function (DUF2528) ILQ33_10075 PF00717 Peptidase S24-like ILQ33_10075 PF01381 Helix-turn-helix ILQ33_10100 PF03796 DnaB-like helicase C terminal domain ILQ33_10100 PF00772 DnaB-like helicase N terminal domain ILQ33_10155 PF00149 Calcineurin-like phosphoesterase ILQ33_10180 PF00161 Ribosome inactivating protein ILQ33_10185 PF02258 Shiga-like toxin beta subunit ILQ33_10195 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_10210 PF04971 Bacteriophage P21 holin S ILQ33_10215 PF00959 Phage lysozyme ILQ33_10220 PF03245 Bacteriophage Rz lysis protein ILQ33_10235 PF13132 Domain of unknown function (DUF3950) ILQ33_10335 PF06316 Enterobacterial Ail/Lom protein ILQ33_10340 PF03335 Phage tail fibre repeat ILQ33_10340 PF07484 Phage Tail Collar Domain ILQ33_10340 PF08400 Prophage tail fibre N-terminal ILQ33_10350 PF00271 Helicase conserved C-terminal domain ILQ33_10350 PF18339 RapA N-terminal Tudor like domain 1 ILQ33_10350 PF12137 RNA polymerase recycling family C-terminal ILQ33_10350 PF00176 SNF2 family N-terminal domain ILQ33_10350 PF18337 RapA N-terminal Tudor like domain ILQ33_10360 PF00768 D-alanyl-D-alanine carboxypeptidase ILQ33_10360 PF07943 Penicillin-binding protein 5, C-terminal domain ILQ33_10365 PF06445 GyrI-like small molecule binding domain ILQ33_10370 PF04632 Fusaric acid resistance protein family ILQ33_10375 PF04363 Protein of unknown function (DUF496) ILQ33_10380 PF10662 Ethanolamine utilisation - propanediol utilisation ILQ33_10405 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ILQ33_10410 PF06174 Protein of unknown function (DUF987) ILQ33_10415 PF04002 RadC-like JAB domain ILQ33_10420 PF03230 Antirestriction protein ILQ33_10425 PF06067 Domain of unknown function (DUF932) ILQ33_10445 PF13990 YjcZ-like protein ILQ33_10460 PF07715 TonB-dependent Receptor Plug Domain ILQ33_10465 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_10465 PF13817 IS66 C-terminal element ILQ33_10465 PF03050 Transposase IS66 family ILQ33_10465 PF13007 Transposase C of IS166 homeodomain ILQ33_10470 PF05717 IS66 Orf2 like protein ILQ33_10480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ILQ33_10485 PF02654 Cobalamin-5-phosphate synthase ILQ33_10490 PF02277 Phosphoribosyltransferase ILQ33_10495 PF17969 L,D-transpeptidase C-terminal domain ILQ33_10495 PF03734 L,D-transpeptidase catalytic domain ILQ33_10505 PF03466 LysR substrate binding domain ILQ33_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_10510 PF03466 LysR substrate binding domain ILQ33_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_10520 PF01554 MatE ILQ33_10530 PF01709 Transcriptional regulator ILQ33_10535 PF01048 Phosphorylase superfamily ILQ33_10535 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ILQ33_10540 PF00083 Sugar (and other) transporter ILQ33_10540 PF07690 Major Facilitator Superfamily ILQ33_10570 PF06167 Glucose-regulated metallo-peptidase M90 ILQ33_10595 PF07358 Protein of unknown function (DUF1482) ILQ33_10600 PF05358 DicB protein ILQ33_10605 PF07151 Protein of unknown function (DUF1391) ILQ33_10635 PF07789 Protein of unknown function (DUF1627) ILQ33_10670 PF01848 Hok/gef family ILQ33_10680 PF06147 Protein of unknown function (DUF968) ILQ33_10685 PF05866 Endodeoxyribonuclease RusA ILQ33_10720 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_10730 PF04971 Bacteriophage P21 holin S ILQ33_10735 PF07041 Protein of unknown function (DUF1327) ILQ33_10740 PF00959 Phage lysozyme ILQ33_10755 PF06085 Lipoprotein Rz1 precursor ILQ33_10760 PF06069 PerC transcriptional activator ILQ33_10765 PF13132 Domain of unknown function (DUF3950) ILQ33_10770 PF07471 Phage DNA packaging protein Nu1 ILQ33_10780 PF02831 gpW ILQ33_10790 PF01343 Peptidase family S49 ILQ33_10800 PF03864 Phage major capsid protein E ILQ33_10850 PF06316 Enterobacterial Ail/Lom protein ILQ33_10855 PF08400 Prophage tail fibre N-terminal ILQ33_10855 PF03335 Phage tail fibre repeat ILQ33_10855 PF07484 Phage Tail Collar Domain ILQ33_10865 PF04806 EspF protein repeat ILQ33_10875 PF01292 Prokaryotic cytochrome b561 ILQ33_10880 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ILQ33_10885 PF01794 Ferric reductase like transmembrane component ILQ33_10890 PF00174 Oxidoreductase molybdopterin binding domain ILQ33_10895 PF00576 HIUase/Transthyretin family ILQ33_10900 PF00072 Response regulator receiver domain ILQ33_10900 PF00486 Transcriptional regulatory protein, C terminal ILQ33_10905 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_10905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_10925 PF01966 HD domain ILQ33_10930 PF00145 C-5 cytosine-specific DNA methylase ILQ33_10930 PF18284 DNA methylase N-terminal domain ILQ33_10935 PF03852 DNA mismatch endonuclease Vsr ILQ33_10940 PF00892 EamA-like transporter family ILQ33_10945 PF05661 Protein of unknown function (DUF808) ILQ33_10950 PF09926 Uncharacterized small protein (DUF2158) ILQ33_10955 PF17151 Periplasmic sensor domain ILQ33_10955 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_10965 PF10733 Protein of unknown function (DUF2525) ILQ33_10970 PF10781 Dextransucrase DSRB ILQ33_10975 PF00196 Bacterial regulatory proteins, luxR family ILQ33_10980 PF01311 Bacterial export proteins, family 1 ILQ33_10985 PF01313 Bacterial export proteins, family 3 ILQ33_10990 PF00813 FliP family ILQ33_10995 PF04347 Flagellar biosynthesis protein, FliO ILQ33_11000 PF16973 Flagellar motor switch protein FliN N-terminal ILQ33_11000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ILQ33_11005 PF02154 Flagellar motor switch protein FliM ILQ33_11005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ILQ33_11010 PF03748 Flagellar basal body-associated protein FliL ILQ33_11015 PF02120 Flagellar hook-length control protein FliK ILQ33_11020 PF02050 Flagellar FliJ protein ILQ33_11025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ33_11025 PF18269 T3SS EscN ATPase C-terminal domain ILQ33_11030 PF02108 Flagellar assembly protein FliH ILQ33_11035 PF01706 FliG C-terminal domain ILQ33_11035 PF14842 FliG N-terminal domain ILQ33_11035 PF14841 FliG middle domain ILQ33_11040 PF01514 Secretory protein of YscJ/FliF family ILQ33_11040 PF08345 Flagellar M-ring protein C-terminal ILQ33_11045 PF02049 Flagellar hook-basal body complex protein FliE ILQ33_11050 PF17607 Family of unknown function (DUF5503) ILQ33_11055 PF00583 Acetyltransferase (GNAT) family ILQ33_11060 PF17607 Family of unknown function (DUF5503) ILQ33_11065 PF00583 Acetyltransferase (GNAT) family ILQ33_11070 PF02586 SOS response associated peptidase (SRAP) ILQ33_11075 PF01206 Sulfurtransferase TusA ILQ33_11080 PF04143 Sulphur transport ILQ33_11085 PF13987 YedD-like protein ILQ33_11090 PF00128 Alpha amylase, catalytic domain ILQ33_11090 PF02806 Alpha amylase, C-terminal all-beta domain ILQ33_11095 PF05400 Flagellar protein FliT ILQ33_11100 PF02561 Flagellar protein FliS ILQ33_11105 PF02465 Flagellar hook-associated protein 2 N-terminus ILQ33_11105 PF07195 Flagellar hook-associated protein 2 C-terminus ILQ33_11110 PF12445 Flagellin protein ILQ33_11110 PF00700 Bacterial flagellin C-terminal helical region ILQ33_11110 PF00669 Bacterial flagellin N-terminal helical region ILQ33_11115 PF04542 Sigma-70 region 2 ILQ33_11115 PF04539 Sigma-70 region 3 ILQ33_11115 PF04545 Sigma-70, region 4 ILQ33_11120 PF02899 Phage integrase, N-terminal SAM-like domain ILQ33_11125 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_11130 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_11135 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_11140 PF00005 ABC transporter ILQ33_11145 PF00196 Bacterial regulatory proteins, luxR family ILQ33_11145 PF03472 Autoinducer binding domain ILQ33_11150 PF10769 Protein of unknown function (DUF2594) ILQ33_11160 PF00196 Bacterial regulatory proteins, luxR family ILQ33_11160 PF00072 Response regulator receiver domain ILQ33_11165 PF08459 UvrC Helix-hairpin-helix N-terminal ILQ33_11165 PF01541 GIY-YIG catalytic domain ILQ33_11165 PF02151 UvrB/uvrC motif ILQ33_11170 PF01066 CDP-alcohol phosphatidyltransferase ILQ33_11200 PF00665 Integrase core domain ILQ33_11200 PF13936 Helix-turn-helix domain ILQ33_11210 PF04984 Phage tail sheath protein subtilisin-like domain ILQ33_11210 PF17482 Phage tail sheath C-terminal domain ILQ33_11245 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ33_11255 PF10784 Plasmid stability protein ILQ33_11260 PF06406 StbA protein ILQ33_11265 PF05840 Bacteriophage replication gene A protein (GPA) ILQ33_11345 PF00589 Phage integrase family ILQ33_11345 PF02899 Phage integrase, N-terminal SAM-like domain ILQ33_11350 PF02810 SEC-C motif ILQ33_11350 PF03695 Uncharacterised protein family (UPF0149) ILQ33_11355 PF03222 Tryptophan/tyrosine permease family ILQ33_11360 PF10678 Protein of unknown function (DUF2492) ILQ33_11365 PF00210 Ferritin-like domain ILQ33_11370 PF13992 YecR-like lipoprotein ILQ33_11380 PF10964 Protein of unknown function (DUF2766) ILQ33_11385 PF00210 Ferritin-like domain ILQ33_11390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ33_11395 PF00005 ABC transporter ILQ33_11400 PF02653 Branched-chain amino acid transport system / permease component ILQ33_11405 PF02358 Trehalose-phosphatase ILQ33_11410 PF00982 Glycosyltransferase family 20 ILQ33_11415 PF00582 Universal stress protein family ILQ33_11420 PF05247 Flagellar transcriptional activator (FlhD) ILQ33_11425 PF05280 Flagellar transcriptional activator (FlhC) ILQ33_11430 PF01618 MotA/TolQ/ExbB proton channel family ILQ33_11435 PF13677 Membrane MotB of proton-channel complex MotA/MotB ILQ33_11435 PF00691 OmpA family ILQ33_11440 PF02895 Signal transducing histidine kinase, homodimeric domain ILQ33_11440 PF09078 CheY binding ILQ33_11440 PF01584 CheW-like domain ILQ33_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_11440 PF01627 Hpt domain ILQ33_11445 PF01584 CheW-like domain ILQ33_11450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ33_11450 PF02203 Tar ligand binding domain homologue ILQ33_11450 PF00672 HAMP domain ILQ33_11455 PF00672 HAMP domain ILQ33_11455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ33_11455 PF02203 Tar ligand binding domain homologue ILQ33_11460 PF03705 CheR methyltransferase, all-alpha domain ILQ33_11460 PF01739 CheR methyltransferase, SAM binding domain ILQ33_11465 PF00072 Response regulator receiver domain ILQ33_11465 PF01339 CheB methylesterase ILQ33_11470 PF00072 Response regulator receiver domain ILQ33_11475 PF04344 Chemotaxis phosphatase, CheZ ILQ33_11480 PF01312 FlhB HrpN YscU SpaS Family ILQ33_11485 PF00771 FHIPEP family ILQ33_11490 PF06366 Flagellar protein FlhE ILQ33_11495 PF07007 Lysozyme inhibitor LprI ILQ33_11500 PF00750 tRNA synthetases class I (R) ILQ33_11500 PF03485 Arginyl tRNA synthetase N terminal domain ILQ33_11500 PF05746 DALR anticodon binding domain ILQ33_11505 PF06185 YecM protein ILQ33_11510 PF03932 CutC family ILQ33_11515 PF03264 NapC/NirT cytochrome c family, N-terminal region ILQ33_11520 PF01568 Molydopterin dinucleotide binding domain ILQ33_11520 PF18364 Molybdopterin oxidoreductase N-terminal domain ILQ33_11520 PF00384 Molybdopterin oxidoreductase ILQ33_11525 PF08003 Protein of unknown function (DUF1698) ILQ33_11530 PF13649 Methyltransferase domain ILQ33_11535 PF01124 MAPEG family ILQ33_11540 PF01904 Protein of unknown function DUF72 ILQ33_11545 PF00857 Isochorismatase family ILQ33_11550 PF02938 GAD domain ILQ33_11550 PF01336 OB-fold nucleic acid binding domain ILQ33_11550 PF00152 tRNA synthetases class II (D, K and N) ILQ33_11555 PF00293 NUDIX domain ILQ33_11560 PF01709 Transcriptional regulator ILQ33_11565 PF02075 Crossover junction endodeoxyribonuclease RuvC ILQ33_11570 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ILQ33_11580 PF01330 RuvA N terminal domain ILQ33_11580 PF07499 RuvA, C-terminal domain ILQ33_11585 PF05496 Holliday junction DNA helicase RuvB P-loop domain ILQ33_11585 PF05491 RuvB C-terminal winged helix domain ILQ33_11585 PF17864 RuvB AAA lid domain ILQ33_11590 PF00950 ABC 3 transport family ILQ33_11595 PF00005 ABC transporter ILQ33_11600 PF01297 Zinc-uptake complex component A periplasmic ILQ33_11605 PF08525 Opacity-associated protein A N-terminal motif ILQ33_11605 PF01476 LysM domain ILQ33_11605 PF01551 Peptidase family M23 ILQ33_11610 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ33_11615 PF00224 Pyruvate kinase, barrel domain ILQ33_11615 PF02887 Pyruvate kinase, alpha/beta domain ILQ33_11620 PF01380 SIS domain ILQ33_11620 PF01418 Helix-turn-helix domain, rpiR family ILQ33_11625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ILQ33_11625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ILQ33_11630 PF00920 Dehydratase family ILQ33_11635 PF01081 KDPG and KHG aldolase ILQ33_11640 PF02222 ATP-grasp domain ILQ33_11645 PF07130 YebG protein ILQ33_11650 PF13995 YebF-like protein ILQ33_11655 PF04391 Protein of unknown function (DUF533) ILQ33_11660 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ILQ33_11660 PF00326 Prolyl oligopeptidase family ILQ33_11665 PF00929 Exonuclease ILQ33_11670 PF00795 Carbon-nitrogen hydrolase ILQ33_11675 PF06440 DNA polymerase III, theta subunit ILQ33_11680 PF04234 CopC domain ILQ33_11685 PF05425 Copper resistance protein D ILQ33_11690 PF10709 Protein of unknown function (DUF2511) ILQ33_11695 PF00149 Calcineurin-like phosphoesterase ILQ33_11700 PF07358 Protein of unknown function (DUF1482) ILQ33_11705 PF07351 Protein of unknown function (DUF1480) ILQ33_11710 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF ILQ33_11710 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ILQ33_11710 PF01189 16S rRNA methyltransferase RsmB/F ILQ33_11715 PF02470 MlaD protein ILQ33_11720 PF04403 Paraquat-inducible protein A ILQ33_11725 PF13185 GAF domain ILQ33_11730 PF17516 ProQ C-terminal domain ILQ33_11730 PF04352 ProQ/FINO family ILQ33_11735 PF17804 Tail specific protease N-terminal domain ILQ33_11735 PF03572 Peptidase family S41 ILQ33_11735 PF11818 C-terminal domain of tail specific protease (DUF3340) ILQ33_11735 PF00595 PDZ domain ILQ33_11740 PF01435 Peptidase family M48 ILQ33_11745 PF07690 Major Facilitator Superfamily ILQ33_11750 PF01614 Bacterial transcriptional regulator ILQ33_11750 PF09339 IclR helix-turn-helix domain ILQ33_11755 PF13996 YobH-like protein ILQ33_11760 PF13998 MgrB protein ILQ33_11765 PF13974 YebO-like protein ILQ33_11770 PF10736 Protein of unknown function (DUF2627) ILQ33_11775 PF00313 'Cold-shock' DNA-binding domain ILQ33_11780 PF13847 Methyltransferase domain ILQ33_11785 PF02659 Putative manganese efflux pump ILQ33_11790 PF06173 Protein of unknown function (DUF986) ILQ33_11795 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ33_11800 PF03609 PTS system sorbose-specific iic component ILQ33_11805 PF03610 PTS system fructose IIA component ILQ33_11805 PF03830 PTS system sorbose subfamily IIB component ILQ33_11810 PF03741 Integral membrane protein TerC family ILQ33_11810 PF03471 Transporter associated domain ILQ33_11815 PF00563 EAL domain ILQ33_11815 PF12792 CSS motif domain associated with EAL ILQ33_11820 PF03313 Serine dehydratase alpha chain ILQ33_11820 PF03315 Serine dehydratase beta chain ILQ33_11825 PF00293 NUDIX domain ILQ33_11830 PF00425 chorismate binding enzyme ILQ33_11830 PF04715 Anthranilate synthase component I, N terminal region ILQ33_11835 PF03701 Uncharacterised protein family (UPF0181) ILQ33_11840 PF08986 Domain of unknown function (DUF1889) ILQ33_11845 PF01042 Endoribonuclease L-PSP ILQ33_11850 PF13307 Helicase C-terminal domain ILQ33_11850 PF04851 Type III restriction enzyme, res subunit ILQ33_11855 PF00814 Glycoprotease family ILQ33_11860 PF03843 Outer membrane lipoprotein Slp family ILQ33_11865 PF13193 AMP-binding enzyme C-terminal domain ILQ33_11865 PF00501 AMP-binding enzyme ILQ33_11870 PF00570 HRDC domain ILQ33_11870 PF01612 3'-5' exonuclease ILQ33_11875 PF00175 Oxidoreductase NAD-binding domain ILQ33_11875 PF00970 Oxidoreductase FAD-binding domain ILQ33_11875 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ33_11880 PF00355 Rieske [2Fe-2S] domain ILQ33_11880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILQ33_11885 PF02028 BCCT, betaine/carnitine/choline family transporter ILQ33_11890 PF00180 Isocitrate/isopropylmalate dehydrogenase ILQ33_11895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_11895 PF03466 LysR substrate binding domain ILQ33_11900 PF01810 LysE type translocator ILQ33_11905 PF09313 Domain of unknown function (DUF1971) ILQ33_11910 PF08956 Domain of unknown function (DUF1869) ILQ33_11915 PF04226 Transglycosylase associated protein ILQ33_11935 PF03891 Domain of unknown function (DUF333) ILQ33_11940 PF04343 Protein of unknown function, DUF488 ILQ33_11945 PF07690 Major Facilitator Superfamily ILQ33_11950 PF12833 Helix-turn-helix domain ILQ33_11950 PF02311 AraC-like ligand binding domain ILQ33_11955 PF04284 Protein of unknown function (DUF441) ILQ33_11965 PF04073 Aminoacyl-tRNA editing domain ILQ33_11970 PF17155 Gammaproteobacterial periplasmic sensor domain ILQ33_11970 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_11975 PF17158 Membrane-associated sensor, integral membrane domain ILQ33_11975 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_11980 PF04285 Protein of unknown function (DUF444) ILQ33_11985 PF06798 PrkA serine protein kinase C-terminal domain ILQ33_11985 PF08298 PrkA AAA domain ILQ33_11990 PF06629 MltA-interacting protein MipA ILQ33_11995 PF00248 Aldo/keto reductase family ILQ33_12000 PF01263 Aldose 1-epimerase ILQ33_12005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILQ33_12005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILQ33_12010 PF01641 SelR domain ILQ33_12015 PF07023 Protein of unknown function (DUF1315) ILQ33_12020 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_12020 PF00107 Zinc-binding dehydrogenase ILQ33_12025 PF00083 Sugar (and other) transporter ILQ33_12030 PF00107 Zinc-binding dehydrogenase ILQ33_12030 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_12035 PF01116 Fructose-bisphosphate aldolase class-II ILQ33_12040 PF00294 pfkB family carbohydrate kinase ILQ33_12045 PF00248 Aldo/keto reductase family ILQ33_12050 PF08220 DeoR-like helix-turn-helix domain ILQ33_12050 PF00455 DeoR C terminal sensor domain ILQ33_12065 PF00857 Isochorismatase family ILQ33_12070 PF00710 Asparaginase, N-terminal ILQ33_12070 PF17763 Glutaminase/Asparaginase C-terminal domain ILQ33_12080 PF01343 Peptidase family S49 ILQ33_12085 PF00881 Nitroreductase family ILQ33_12090 PF00586 AIR synthase related protein, N-terminal domain ILQ33_12090 PF02769 AIR synthase related protein, C-terminal domain ILQ33_12095 PF01131 DNA topoisomerase ILQ33_12095 PF01751 Toprim domain ILQ33_12100 PF06889 Protein of unknown function (DUF1266) ILQ33_12105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ILQ33_12105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ILQ33_12110 PF07383 Protein of unknown function (DUF1496) ILQ33_12115 PF00293 NUDIX domain ILQ33_12120 PF01066 CDP-alcohol phosphatidyltransferase ILQ33_12125 PF00581 Rhodanese-like domain ILQ33_12130 PF00005 ABC transporter ILQ33_12135 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_12140 PF13416 Bacterial extracellular solute-binding protein ILQ33_12145 PF02627 Carboxymuconolactone decarboxylase family ILQ33_12150 PF09335 SNARE associated Golgi protein ILQ33_12160 PF09335 SNARE associated Golgi protein ILQ33_12165 PF03372 Endonuclease/Exonuclease/phosphatase family ILQ33_12170 PF00202 Aminotransferase class-III ILQ33_12175 PF04958 Arginine N-succinyltransferase beta subunit ILQ33_12180 PF00171 Aldehyde dehydrogenase family ILQ33_12185 PF04996 Succinylarginine dihydrolase ILQ33_12190 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ILQ33_12195 PF07813 LTXXQ motif family protein ILQ33_12200 PF05962 HutD ILQ33_12210 PF02540 NAD synthase ILQ33_12215 PF04355 SmpA / OmlA family ILQ33_12220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_12225 PF02378 Phosphotransferase system, EIIC ILQ33_12230 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ILQ33_12235 PF12833 Helix-turn-helix domain ILQ33_12235 PF07883 Cupin domain ILQ33_12240 PF02056 Family 4 glycosyl hydrolase ILQ33_12240 PF11975 Family 4 glycosyl hydrolase C-terminal domain ILQ33_12245 PF04794 YdjC-like protein ILQ33_12250 PF18011 C-terminal domain found in long catalases ILQ33_12250 PF06628 Catalase-related immune-responsive ILQ33_12250 PF00199 Catalase ILQ33_12255 PF10729 Cell division activator CedA ILQ33_12265 PF00375 Sodium:dicarboxylate symporter family ILQ33_12270 PF04307 LexA-binding, inner membrane-associated putative hydrolase ILQ33_12275 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_12280 PF14002 YniB-like protein ILQ33_12285 PF03881 Fructosamine kinase ILQ33_12290 PF11080 Endoribonuclease GhoS ILQ33_12295 PF00294 pfkB family carbohydrate kinase ILQ33_12300 PF04338 Protein of unknown function, DUF481 ILQ33_12315 PF03129 Anticodon binding domain ILQ33_12315 PF02824 TGS domain ILQ33_12315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILQ33_12315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILQ33_12320 PF05198 Translation initiation factor IF-3, N-terminal domain ILQ33_12320 PF00707 Translation initiation factor IF-3, C-terminal domain ILQ33_12325 PF01632 Ribosomal protein L35 ILQ33_12330 PF00453 Ribosomal protein L20 ILQ33_12340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ILQ33_12340 PF01409 tRNA synthetases class II core domain (F) ILQ33_12345 PF01588 Putative tRNA binding domain ILQ33_12345 PF03147 Ferredoxin-fold anticodon binding domain ILQ33_12345 PF03484 tRNA synthetase B5 domain ILQ33_12345 PF03483 B3/4 domain ILQ33_12345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ILQ33_12350 PF00216 Bacterial DNA-binding protein ILQ33_12355 PF01032 FecCD transport family ILQ33_12360 PF00255 Glutathione peroxidase ILQ33_12365 PF00005 ABC transporter ILQ33_12370 PF00877 NlpC/P60 family ILQ33_12375 PF00563 EAL domain ILQ33_12380 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ILQ33_12385 PF10636 Hemin uptake protein hemP ILQ33_12390 PF00793 DAHP synthetase I family ILQ33_12395 PF03618 Kinase/pyrophosphorylase ILQ33_12400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ILQ33_12400 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ33_12400 PF00391 PEP-utilising enzyme, mobile domain ILQ33_12405 PF00501 AMP-binding enzyme ILQ33_12405 PF13193 AMP-binding enzyme C-terminal domain ILQ33_12415 PF01494 FAD binding domain ILQ33_12420 PF01012 Electron transfer flavoprotein domain ILQ33_12420 PF00766 Electron transfer flavoprotein FAD-binding domain ILQ33_12425 PF01012 Electron transfer flavoprotein domain ILQ33_12430 PF02311 AraC-like ligand binding domain ILQ33_12430 PF12833 Helix-turn-helix domain ILQ33_12435 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ33_12435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILQ33_12435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ33_12440 PF01144 Coenzyme A transferase ILQ33_12445 PF01487 Type I 3-dehydroquinase ILQ33_12450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ILQ33_12450 PF08501 Shikimate dehydrogenase substrate binding domain ILQ33_12455 PF07690 Major Facilitator Superfamily ILQ33_12460 PF07690 Major Facilitator Superfamily ILQ33_12465 PF08965 Domain of unknown function (DUF1870) ILQ33_12475 PF01594 AI-2E family transporter ILQ33_12480 PF13183 4Fe-4S dicluster domain ILQ33_12480 PF01565 FAD binding domain ILQ33_12480 PF02913 FAD linked oxidases, C-terminal domain ILQ33_12485 PF03061 Thioesterase superfamily ILQ33_12490 PF15930 Domain of unknown function ILQ33_12495 PF01521 Iron-sulphur cluster biosynthesis ILQ33_12500 PF01458 Uncharacterized protein family (UPF0051) ILQ33_12505 PF00005 ABC transporter ILQ33_12510 PF01458 Uncharacterized protein family (UPF0051) ILQ33_12515 PF00266 Aminotransferase class-V ILQ33_12520 PF02657 Fe-S metabolism associated domain ILQ33_12525 PF17969 L,D-transpeptidase C-terminal domain ILQ33_12525 PF01476 LysM domain ILQ33_12525 PF03734 L,D-transpeptidase catalytic domain ILQ33_12530 PF04728 Lipoprotein leucine-zipper ILQ33_12535 PF02887 Pyruvate kinase, alpha/beta domain ILQ33_12535 PF00224 Pyruvate kinase, barrel domain ILQ33_12540 PF10965 Protein of unknown function (DUF2767) ILQ33_12545 PF12800 4Fe-4S binding domain ILQ33_12545 PF13247 4Fe-4S dicluster domain ILQ33_12550 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain ILQ33_12550 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 ILQ33_12560 PF13247 4Fe-4S dicluster domain ILQ33_12565 PF01292 Prokaryotic cytochrome b561 ILQ33_12575 PF13454 FAD-NAD(P)-binding ILQ33_12580 PF08803 Putative mono-oxygenase ydhR ILQ33_12595 PF03212 Pertactin ILQ33_12595 PF16168 Adhesin of bacterial autotransporter system, probable stalk ILQ33_12600 PF01554 MatE ILQ33_12605 PF00677 Lumazine binding domain ILQ33_12615 PF07690 Major Facilitator Superfamily ILQ33_12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_12620 PF03466 LysR substrate binding domain ILQ33_12625 PF00356 Bacterial regulatory proteins, lacI family ILQ33_12635 PF07690 Major Facilitator Superfamily ILQ33_12640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ILQ33_12640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ILQ33_12645 PF00877 NlpC/P60 family ILQ33_12650 PF00462 Glutaredoxin ILQ33_12655 PF00270 DEAD/DEAH box helicase ILQ33_12655 PF08494 DEAD/H associated ILQ33_12655 PF00271 Helicase conserved C-terminal domain ILQ33_12660 PF00929 Exonuclease ILQ33_12665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILQ33_12670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILQ33_12675 PF16925 Tetracyclin repressor-like, C-terminal domain ILQ33_12675 PF00440 Bacterial regulatory proteins, tetR family ILQ33_12680 PF06945 Protein of unknown function (DUF1289) ILQ33_12690 PF00080 Copper/zinc superoxide dismutase (SODC) ILQ33_12695 PF04632 Fusaric acid resistance protein family ILQ33_12700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_12700 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_12705 PF07869 Protein of unknown function (DUF1656) ILQ33_12710 PF01047 MarR family ILQ33_12715 PF05433 Glycine zipper 2TM domain ILQ33_12720 PF03702 Anhydro-N-acetylmuramic acid kinase ILQ33_12725 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ILQ33_12730 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ILQ33_12730 PF01243 Pyridoxamine 5'-phosphate oxidase ILQ33_12735 PF00579 tRNA synthetases class I (W and Y) ILQ33_12735 PF01479 S4 domain ILQ33_12740 PF08543 Phosphomethylpyrimidine kinase ILQ33_12745 PF02798 Glutathione S-transferase, N-terminal domain ILQ33_12745 PF00043 Glutathione S-transferase, C-terminal domain ILQ33_12750 PF00854 POT family ILQ33_12755 PF10576 Iron-sulfur binding domain of endonuclease III ILQ33_12755 PF00633 Helix-hairpin-helix motif ILQ33_12755 PF00730 HhH-GPD superfamily base excision DNA repair protein ILQ33_12760 PF02508 Rnf-Nqr subunit, membrane protein ILQ33_12765 PF04205 FMN-binding domain ILQ33_12770 PF03116 NQR2, RnfD, RnfE family ILQ33_12775 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ILQ33_12775 PF10531 SLBB domain ILQ33_12775 PF13375 RnfC Barrel sandwich hybrid domain ILQ33_12775 PF12838 4Fe-4S dicluster domain ILQ33_12780 PF04060 Putative Fe-S cluster ILQ33_12785 PF02508 Rnf-Nqr subunit, membrane protein ILQ33_12790 PF10754 Protein of unknown function (DUF2569) ILQ33_12795 PF05321 Haemolysin expression modulating protein ILQ33_12805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ33_12805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ILQ33_12810 PF00962 Adenosine/AMP deaminase ILQ33_12815 PF00155 Aminotransferase class I and II ILQ33_12820 PF00367 phosphotransferase system, EIIB ILQ33_12820 PF02378 Phosphotransferase system, EIIC ILQ33_12825 PF00356 Bacterial regulatory proteins, lacI family ILQ33_12825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ33_12835 PF00440 Bacterial regulatory proteins, tetR family ILQ33_12855 PF06097 Bacterial protein of unknown function (DUF945) ILQ33_12860 PF01238 Phosphomannose isomerase type I ILQ33_12865 PF05683 Fumarase C-terminus ILQ33_12865 PF05681 Fumarate hydratase (Fumerase) ILQ33_12870 PF10415 Fumarase C C-terminus ILQ33_12870 PF00206 Lyase ILQ33_12875 PF05472 DNA replication terminus site-binding protein (Ter protein) ILQ33_12880 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_12880 PF00672 HAMP domain ILQ33_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_12885 PF00486 Transcriptional regulatory protein, C terminal ILQ33_12885 PF00072 Response regulator receiver domain ILQ33_12890 PF06942 GlpM protein ILQ33_12900 PF13520 Amino acid permease ILQ33_12905 PF07338 Protein of unknown function (DUF1471) ILQ33_12910 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ILQ33_12910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ILQ33_12910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ILQ33_12915 PF02233 NAD(P) transhydrogenase beta subunit ILQ33_12920 PF01594 AI-2E family transporter ILQ33_12925 PF00893 Small Multidrug Resistance protein ILQ33_12930 PF00893 Small Multidrug Resistance protein ILQ33_12935 PF00089 Trypsin ILQ33_12950 PF07690 Major Facilitator Superfamily ILQ33_12955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_12955 PF03466 LysR substrate binding domain ILQ33_12960 PF00480 ROK family ILQ33_12970 PF00654 Voltage gated chloride channel ILQ33_12975 PF02613 Nitrate reductase delta subunit ILQ33_12980 PF04976 DMSO reductase anchor subunit (DmsC) ILQ33_12985 PF13247 4Fe-4S dicluster domain ILQ33_12985 PF12800 4Fe-4S binding domain ILQ33_12990 PF01568 Molydopterin dinucleotide binding domain ILQ33_12990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ33_12990 PF00384 Molybdopterin oxidoreductase ILQ33_12995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ33_12995 PF01568 Molydopterin dinucleotide binding domain ILQ33_12995 PF00384 Molybdopterin oxidoreductase ILQ33_13000 PF06649 Protein of unknown function (DUF1161) ILQ33_13005 PF06788 Uncharacterised protein family (UPF0257) ILQ33_13010 PF13302 Acetyltransferase (GNAT) domain ILQ33_13015 PF06932 Protein of unknown function (DUF1283) ILQ33_13020 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ILQ33_13035 PF12684 PDDEXK-like domain of unknown function (DUF3799) ILQ33_13035 PF06630 Enterobacterial exodeoxyribonuclease VIII ILQ33_13045 PF05358 DicB protein ILQ33_13060 PF07151 Protein of unknown function (DUF1391) ILQ33_13085 PF01695 IstB-like ATP binding protein ILQ33_13090 PF07789 Protein of unknown function (DUF1627) ILQ33_13100 PF02677 Epoxyqueuosine reductase QueH ILQ33_13105 PF00145 C-5 cytosine-specific DNA methylase ILQ33_13110 PF09015 NgoMIV restriction enzyme ILQ33_13120 PF06147 Protein of unknown function (DUF968) ILQ33_13125 PF05866 Endodeoxyribonuclease RusA ILQ33_13130 PF03589 Antitermination protein ILQ33_13140 PF01555 DNA methylase ILQ33_13145 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_13160 PF04971 Bacteriophage P21 holin S ILQ33_13165 PF00959 Phage lysozyme ILQ33_13200 PF00574 Clp protease ILQ33_13270 PF06316 Enterobacterial Ail/Lom protein ILQ33_13275 PF08400 Prophage tail fibre N-terminal ILQ33_13275 PF03335 Phage tail fibre repeat ILQ33_13275 PF07484 Phage Tail Collar Domain ILQ33_13295 PF06183 DinI-like family ILQ33_13305 PF01232 Mannitol dehydrogenase Rossmann domain ILQ33_13305 PF08125 Mannitol dehydrogenase C-terminal domain ILQ33_13310 PF14001 YdfZ protein ILQ33_13315 PF07729 FCD domain ILQ33_13315 PF00392 Bacterial regulatory proteins, gntR family ILQ33_13320 PF00106 short chain dehydrogenase ILQ33_13325 PF01432 Peptidase family M3 ILQ33_13330 PF02464 Competence-damaged protein ILQ33_13335 PF04076 Bacterial OB fold (BOF) protein ILQ33_13340 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_13350 PF01965 DJ-1/PfpI family ILQ33_13360 PF07690 Major Facilitator Superfamily ILQ33_13365 PF00892 EamA-like transporter family ILQ33_13370 PF13999 MarB protein ILQ33_13375 PF12833 Helix-turn-helix domain ILQ33_13380 PF01047 MarR family ILQ33_13385 PF01914 MarC family integral membrane protein ILQ33_13390 PF07690 Major Facilitator Superfamily ILQ33_13400 PF03466 LysR substrate binding domain ILQ33_13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_13405 PF00171 Aldehyde dehydrogenase family ILQ33_13410 PF04960 Glutaminase ILQ33_13415 PF13811 Domain of unknown function (DUF4186) ILQ33_13420 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_13425 PF01232 Mannitol dehydrogenase Rossmann domain ILQ33_13425 PF08125 Mannitol dehydrogenase C-terminal domain ILQ33_13430 PF01062 Bestrophin, RFP-TM, chloride channel ILQ33_13435 PF13649 Methyltransferase domain ILQ33_13440 PF03992 Antibiotic biosynthesis monooxygenase ILQ33_13445 PF01791 DeoC/LacD family aldolase ILQ33_13450 PF13407 Periplasmic binding protein domain ILQ33_13455 PF02653 Branched-chain amino acid transport system / permease component ILQ33_13460 PF02653 Branched-chain amino acid transport system / permease component ILQ33_13465 PF00005 ABC transporter ILQ33_13470 PF04198 Putative sugar-binding domain ILQ33_13475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ33_13475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ33_13480 PF13018 Extended Signal Peptide of Type V secretion system ILQ33_13505 PF17073 Two-component-system connector protein ILQ33_13510 PF12833 Helix-turn-helix domain ILQ33_13515 PF00884 Sulfatase ILQ33_13520 PF13186 Iron-sulfur cluster-binding domain ILQ33_13520 PF04055 Radical SAM superfamily ILQ33_13530 PF06472 ABC transporter transmembrane region 2 ILQ33_13530 PF00005 ABC transporter ILQ33_13535 PF07715 TonB-dependent Receptor Plug Domain ILQ33_13540 PF00675 Insulinase (Peptidase family M16) ILQ33_13540 PF05193 Peptidase M16 inactive domain ILQ33_13545 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILQ33_13550 PF13520 Amino acid permease ILQ33_13555 PF02638 Glycosyl hydrolase-like 10 ILQ33_13565 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_13575 PF01427 D-ala-D-ala dipeptidase ILQ33_13580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_13585 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_13590 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_13590 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ33_13595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_13595 PF00005 ABC transporter ILQ33_13600 PF00005 ABC transporter ILQ33_13600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_13605 PF02566 OsmC-like protein ILQ33_13610 PF10684 Putative biofilm-dependent modulation protein ILQ33_13615 PF08136 30S ribosomal protein subunit S22 family ILQ33_13620 PF00390 Malic enzyme, N-terminal domain ILQ33_13620 PF03949 Malic enzyme, NAD binding domain ILQ33_13625 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_13625 PF00107 Zinc-binding dehydrogenase ILQ33_13630 PF01381 Helix-turn-helix ILQ33_13635 PF01292 Prokaryotic cytochrome b561 ILQ33_13640 PF12800 4Fe-4S binding domain ILQ33_13640 PF09163 Formate dehydrogenase N, transmembrane ILQ33_13640 PF13247 4Fe-4S dicluster domain ILQ33_13650 PF00892 EamA-like transporter family ILQ33_13655 PF00267 Gram-negative porin ILQ33_13675 PF07690 Major Facilitator Superfamily ILQ33_13680 PF01568 Molydopterin dinucleotide binding domain ILQ33_13680 PF00384 Molybdopterin oxidoreductase ILQ33_13680 PF14710 Respiratory nitrate reductase alpha N-terminal ILQ33_13685 PF14711 Respiratory nitrate reductase beta C-terminal ILQ33_13685 PF13247 4Fe-4S dicluster domain ILQ33_13690 PF02613 Nitrate reductase delta subunit ILQ33_13695 PF02665 Nitrate reductase gamma subunit ILQ33_13700 PF02567 Phenazine biosynthesis-like protein ILQ33_13710 PF01613 Flavin reductase like domain ILQ33_13715 PF01361 Tautomerase enzyme ILQ33_13740 PF03527 RHS protein ILQ33_13740 PF14220 Domain of unknown function (DUF4329) ILQ33_13740 PF05593 RHS Repeat ILQ33_13745 PF04717 Type VI secretion system, phage-baseplate injector ILQ33_13750 PF17520 Family of unknown function (DUF5445) ILQ33_13755 PF13417 Glutathione S-transferase, N-terminal domain ILQ33_13760 PF00324 Amino acid permease ILQ33_13770 PF07715 TonB-dependent Receptor Plug Domain ILQ33_13770 PF00593 TonB dependent receptor ILQ33_13775 PF07729 FCD domain ILQ33_13775 PF00392 Bacterial regulatory proteins, gntR family ILQ33_13780 PF00107 Zinc-binding dehydrogenase ILQ33_13780 PF16884 N-terminal domain of oxidoreductase ILQ33_13785 PF00583 Acetyltransferase (GNAT) family ILQ33_13790 PF04657 Putative inner membrane exporter, YdcZ ILQ33_13795 PF10735 Protein of unknown function (DUF2526) ILQ33_13800 PF10753 Toxin GhoT_OrtT ILQ33_13810 PF00171 Aldehyde dehydrogenase family ILQ33_13815 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_13820 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_13825 PF08402 TOBE domain ILQ33_13825 PF00005 ABC transporter ILQ33_13830 PF13416 Bacterial extracellular solute-binding protein ILQ33_13835 PF00155 Aminotransferase class I and II ILQ33_13835 PF00392 Bacterial regulatory proteins, gntR family ILQ33_13840 PF01381 Helix-turn-helix ILQ33_13840 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ILQ33_13845 PF07927 HicA toxin of bacterial toxin-antitoxin, ILQ33_13850 PF10829 Protein of unknown function (DUF2554) ILQ33_13855 PF12392 Collagenase ILQ33_13855 PF01136 Peptidase family U32 ILQ33_13860 PF07883 Cupin domain ILQ33_13860 PF01381 Helix-turn-helix ILQ33_13865 PF03594 Benzoate membrane transport protein ILQ33_13870 PF11769 Protein of unknown function (DUF3313) ILQ33_13875 PF03848 Tellurite resistance protein TehB ILQ33_13880 PF03595 Voltage-dependent anion channel ILQ33_13885 PF18836 Beta solenoid repeat from YDCK ILQ33_13895 PF04325 Protein of unknown function (DUF465) ILQ33_13900 PF04349 Periplasmic glucan biosynthesis protein, MdoG ILQ33_13905 PF07063 Domain of unknown function (DUF1338) ILQ33_13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_13910 PF03466 LysR substrate binding domain ILQ33_13915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ33_13915 PF00672 HAMP domain ILQ33_13915 PF02203 Tar ligand binding domain homologue ILQ33_13920 PF01848 Hok/gef family ILQ33_13930 PF01292 Prokaryotic cytochrome b561 ILQ33_13935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILQ33_13935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILQ33_13940 PF00171 Aldehyde dehydrogenase family ILQ33_13945 PF02698 DUF218 domain ILQ33_13970 PF04408 Helicase associated domain (HA2) ILQ33_13970 PF11898 Domain of unknown function (DUF3418) ILQ33_13970 PF00270 DEAD/DEAH box helicase ILQ33_13970 PF00271 Helicase conserved C-terminal domain ILQ33_13970 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ILQ33_13975 PF02525 Flavodoxin-like fold ILQ33_13980 PF00782 Dual specificity phosphatase, catalytic domain ILQ33_13985 PF12147 Putative methyltransferase ILQ33_13985 PF12146 Serine aminopeptidase, S33 ILQ33_13995 PF01066 CDP-alcohol phosphatidyltransferase ILQ33_14000 PF10971 Protein of unknown function (DUF2773) ILQ33_14005 PF00248 Aldo/keto reductase family ILQ33_14020 PF07027 Protein of unknown function (DUF1318) ILQ33_14025 PF13617 YnbE-like lipoprotein ILQ33_14030 PF11739 Dicarboxylate transport ILQ33_14035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ33_14035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ33_14040 PF03724 META domain ILQ33_14045 PF03891 Domain of unknown function (DUF333) ILQ33_14050 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ILQ33_14050 PF10371 Domain of unknown function ILQ33_14050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_14050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ILQ33_14050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ILQ33_14060 PF00582 Universal stress protein family ILQ33_14065 PF01171 PP-loop family ILQ33_14070 PF03880 DbpA RNA binding domain ILQ33_14070 PF00270 DEAD/DEAH box helicase ILQ33_14070 PF00271 Helicase conserved C-terminal domain ILQ33_14080 PF01544 CorA-like Mg2+ transporter protein ILQ33_14085 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_14085 PF08448 PAS fold ILQ33_14090 PF01713 Smr domain ILQ33_14095 PF03466 LysR substrate binding domain ILQ33_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_14100 PF01546 Peptidase family M20/M25/M40 ILQ33_14100 PF07687 Peptidase dimerisation domain ILQ33_14105 PF01546 Peptidase family M20/M25/M40 ILQ33_14115 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILQ33_14115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILQ33_14120 PF00325 Bacterial regulatory proteins, crp family ILQ33_14120 PF00027 Cyclic nucleotide-binding domain ILQ33_14125 PF00582 Universal stress protein family ILQ33_14130 PF10749 Protein of unknown function (DUF2534) ILQ33_14135 PF00924 Mechanosensitive ion channel ILQ33_14140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_14145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_14145 PF03466 LysR substrate binding domain ILQ33_14150 PF12146 Serine aminopeptidase, S33 ILQ33_14165 PF00246 Zinc carboxypeptidase ILQ33_14170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ILQ33_14170 PF13378 Enolase C-terminal domain-like ILQ33_14175 PF08534 Redoxin ILQ33_14180 PF00158 Sigma-54 interaction domain ILQ33_14180 PF18024 Helix-turn-helix domain ILQ33_14180 PF13188 PAS domain ILQ33_14185 PF05128 Domain of unknown function (DUF697) ILQ33_14190 PF04317 YcjX-like family, DUF463 ILQ33_14195 PF00356 Bacterial regulatory proteins, lacI family ILQ33_14195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ33_14200 PF09381 Outer membrane protein G (OmpG) ILQ33_14205 PF00005 ABC transporter ILQ33_14205 PF17912 MalK OB fold domain ILQ33_14205 PF03459 TOBE domain ILQ33_14210 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_14215 PF03633 Glycosyl hydrolase family 65, C-terminal domain ILQ33_14215 PF03636 Glycosyl hydrolase family 65, N-terminal domain ILQ33_14215 PF03632 Glycosyl hydrolase family 65 central catalytic domain ILQ33_14220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ILQ33_14220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ33_14225 PF01261 Xylose isomerase-like TIM barrel ILQ33_14230 PF00107 Zinc-binding dehydrogenase ILQ33_14235 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_14240 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_14255 PF00581 Rhodanese-like domain ILQ33_14260 PF09584 Phage shock protein PspD (Phageshock_PspD) ILQ33_14265 PF04024 PspC domain ILQ33_14270 PF06667 Phage shock protein B ILQ33_14275 PF04012 PspA/IM30 family ILQ33_14280 PF00158 Sigma-54 interaction domain ILQ33_14280 PF02954 Bacterial regulatory protein, Fis family ILQ33_14285 PF00202 Aminotransferase class-III ILQ33_14290 PF01266 FAD dependent oxidoreductase ILQ33_14295 PF00171 Aldehyde dehydrogenase family ILQ33_14300 PF01381 Helix-turn-helix ILQ33_14300 PF07883 Cupin domain ILQ33_14310 PF00120 Glutamine synthetase, catalytic domain ILQ33_14320 PF00324 Amino acid permease ILQ33_14325 PF10820 Protein of unknown function (DUF2543) ILQ33_14330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_14335 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_14340 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_14340 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ33_14345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_14345 PF00005 ABC transporter ILQ33_14350 PF00005 ABC transporter ILQ33_14355 PF07690 Major Facilitator Superfamily ILQ33_14360 PF02321 Outer membrane efflux protein ILQ33_14370 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_14370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_14375 PF16295 Tetracyclin repressor-like, C-terminal domain ILQ33_14375 PF00440 Bacterial regulatory proteins, tetR family ILQ33_14390 PF08206 Ribonuclease B OB domain ILQ33_14390 PF00773 RNB domain ILQ33_14390 PF00575 S1 RNA binding domain ILQ33_14390 PF17876 Cold shock domain ILQ33_14395 PF13426 PAS domain ILQ33_14395 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_14395 PF00563 EAL domain ILQ33_14405 PF00455 DeoR C terminal sensor domain ILQ33_14405 PF08220 DeoR-like helix-turn-helix domain ILQ33_14410 PF05433 Glycine zipper 2TM domain ILQ33_14415 PF01253 Translation initiation factor SUI1 ILQ33_14420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ILQ33_14425 PF18073 Rubredoxin metal binding domain ILQ33_14430 PF06305 Lipopolysaccharide assembly protein A domain ILQ33_14435 PF01569 PAP2 superfamily ILQ33_14440 PF00925 GTP cyclohydrolase II ILQ33_14445 PF00330 Aconitase family (aconitate hydratase) ILQ33_14445 PF00694 Aconitase C-terminal domain ILQ33_14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_14465 PF03466 LysR substrate binding domain ILQ33_14470 PF01751 Toprim domain ILQ33_14470 PF01396 Topoisomerase DNA binding C4 zinc finger ILQ33_14470 PF08272 Topoisomerase I zinc-ribbon-like ILQ33_14470 PF01131 DNA topoisomerase ILQ33_14475 PF10692 Protein of unknown function (DUF2498) ILQ33_14480 PF08496 Peptidase family S49 N-terminal ILQ33_14480 PF01343 Peptidase family S49 ILQ33_14485 PF00106 short chain dehydrogenase ILQ33_14490 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ILQ33_14490 PF12557 Cob(I)alamin adenosyltransferase N terminal ILQ33_14495 PF00849 RNA pseudouridylate synthase ILQ33_14495 PF01479 S4 domain ILQ33_14500 PF09972 Predicted membrane protein (DUF2207) ILQ33_14505 PF01300 Telomere recombination ILQ33_14510 PF02811 PHP domain ILQ33_14515 PF08255 Trp-operon Leader Peptide ILQ33_14520 PF04715 Anthranilate synthase component I, N terminal region ILQ33_14520 PF00425 chorismate binding enzyme ILQ33_14525 PF02885 Glycosyl transferase family, helical bundle domain ILQ33_14525 PF00117 Glutamine amidotransferase class-I ILQ33_14525 PF00591 Glycosyl transferase family, a/b domain ILQ33_14530 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ILQ33_14530 PF00218 Indole-3-glycerol phosphate synthase ILQ33_14535 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_14540 PF00290 Tryptophan synthase alpha chain ILQ33_14545 PF10685 Stress-induced bacterial acidophilic repeat motif ILQ33_14550 PF05974 Domain of unknown function (DUF892) ILQ33_14555 PF05974 Domain of unknown function (DUF892) ILQ33_14605 PF05717 IS66 Orf2 like protein ILQ33_14610 PF13007 Transposase C of IS166 homeodomain ILQ33_14610 PF13817 IS66 C-terminal element ILQ33_14610 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_14610 PF03050 Transposase IS66 family ILQ33_14620 PF16809 NleF caspase inhibitor ILQ33_14655 PF07484 Phage Tail Collar Domain ILQ33_14655 PF08400 Prophage tail fibre N-terminal ILQ33_14655 PF03335 Phage tail fibre repeat ILQ33_14660 PF06316 Enterobacterial Ail/Lom protein ILQ33_14730 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_14735 PF02796 Helix-turn-helix domain of resolvase ILQ33_14735 PF00239 Resolvase, N terminal domain ILQ33_14755 PF04865 Baseplate J-like protein ILQ33_14765 PF06890 Bacteriophage Mu Gp45 protein ILQ33_14785 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 ILQ33_14795 PF17482 Phage tail sheath C-terminal domain ILQ33_14795 PF04984 Phage tail sheath protein subtilisin-like domain ILQ33_14820 PF10124 Mu-like prophage major head subunit gpT ILQ33_14825 PF10123 Mu-like prophage I protein ILQ33_14830 PF05069 Phage virion morphogenesis family ILQ33_14835 PF04233 Phage Mu protein F like protein ILQ33_14840 PF06074 Protein of unknown function (DUF935) ILQ33_14845 PF03237 Terminase-like family ILQ33_14885 PF08765 Mor transcription activator family ILQ33_14940 PF07352 Bacteriophage Mu Gam like protein ILQ33_14970 PF09077 Mu B transposition protein, C terminal ILQ33_14970 PF13401 AAA domain ILQ33_15055 PF13132 Domain of unknown function (DUF3950) ILQ33_15075 PF00959 Phage lysozyme ILQ33_15080 PF07041 Protein of unknown function (DUF1327) ILQ33_15085 PF04971 Bacteriophage P21 holin S ILQ33_15090 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_15125 PF05866 Endodeoxyribonuclease RusA ILQ33_15130 PF06147 Protein of unknown function (DUF968) ILQ33_15140 PF01848 Hok/gef family ILQ33_15165 PF01695 IstB-like ATP binding protein ILQ33_15210 PF05358 DicB protein ILQ33_15215 PF07358 Protein of unknown function (DUF1482) ILQ33_15230 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ33_15230 PF00589 Phage integrase family ILQ33_15235 PF03922 OmpW family ILQ33_15250 PF04279 Intracellular septation protein A ILQ33_15255 PF03061 Thioesterase superfamily ILQ33_15260 PF03544 Gram-negative bacterial TonB protein C-terminal ILQ33_15265 PF03795 YCII-related domain ILQ33_15270 PF02254 TrkA-N domain ILQ33_15270 PF07885 Ion channel ILQ33_15280 PF13091 PLD-like domain ILQ33_15280 PF13396 Phospholipase_D-nuclease N-terminal ILQ33_15285 PF04269 Protein of unknown function, DUF440 ILQ33_15290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_15290 PF00005 ABC transporter ILQ33_15295 PF00005 ABC transporter ILQ33_15295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_15300 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_15300 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ33_15305 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_15310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_15315 PF01914 MarC family integral membrane protein ILQ33_15320 PF00171 Aldehyde dehydrogenase family ILQ33_15320 PF00465 Iron-containing alcohol dehydrogenase ILQ33_15325 PF00265 Thymidine kinase ILQ33_15330 PF00816 H-NS histone family ILQ33_15335 PF00483 Nucleotidyl transferase ILQ33_15340 PF00072 Response regulator receiver domain ILQ33_15345 PF01734 Patatin-like phospholipase ILQ33_15350 PF02810 SEC-C motif ILQ33_15355 PF01842 ACT domain ILQ33_15355 PF00551 Formyl transferase ILQ33_15385 PF02665 Nitrate reductase gamma subunit ILQ33_15390 PF02613 Nitrate reductase delta subunit ILQ33_15395 PF13247 4Fe-4S dicluster domain ILQ33_15395 PF14711 Respiratory nitrate reductase beta C-terminal ILQ33_15400 PF14710 Respiratory nitrate reductase alpha N-terminal ILQ33_15400 PF01568 Molydopterin dinucleotide binding domain ILQ33_15400 PF00384 Molybdopterin oxidoreductase ILQ33_15405 PF07690 Major Facilitator Superfamily ILQ33_15410 PF00672 HAMP domain ILQ33_15410 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ILQ33_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_15410 PF07730 Histidine kinase ILQ33_15415 PF00196 Bacterial regulatory proteins, luxR family ILQ33_15415 PF00072 Response regulator receiver domain ILQ33_15420 PF11924 Inverse autotransporter, beta-domain ILQ33_15425 PF02635 DsrE/DsrF-like family ILQ33_15430 PF04752 ChaC-like protein ILQ33_15435 PF06150 ChaB ILQ33_15440 PF01699 Sodium/calcium exchanger protein ILQ33_15445 PF13940 Toxin Ldr, type I toxin-antitoxin system ILQ33_15450 PF13940 Toxin Ldr, type I toxin-antitoxin system ILQ33_15455 PF00793 DAHP synthetase I family ILQ33_15460 PF13369 Transglutaminase-like superfamily ILQ33_15465 PF04247 Invasion gene expression up-regulator, SirB ILQ33_15470 PF13847 Methyltransferase domain ILQ33_15470 PF17827 PrmC N-terminal domain ILQ33_15475 PF00472 RF-1 domain ILQ33_15475 PF03462 PCRF domain ILQ33_15480 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ILQ33_15480 PF01488 Shikimate / quinate 5-dehydrogenase ILQ33_15480 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ILQ33_15485 PF03550 Outer membrane lipoprotein LolB ILQ33_15490 PF08544 GHMP kinases C terminal ILQ33_15490 PF00288 GHMP kinases N terminal domain ILQ33_15495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ILQ33_15495 PF14572 Phosphoribosyl synthetase-associated domain ILQ33_15500 PF00916 Sulfate permease family ILQ33_15500 PF01740 STAS domain ILQ33_15505 PF10762 Protein of unknown function (DUF2583) ILQ33_15510 PF01195 Peptidyl-tRNA hydrolase ILQ33_15515 PF06071 Protein of unknown function (DUF933) ILQ33_15515 PF01926 50S ribosome-binding GTPase ILQ33_15525 PF02733 Dak1 domain ILQ33_15530 PF02734 DAK2 domain ILQ33_15535 PF00381 PTS HPr component phosphorylation site ILQ33_15535 PF05524 PEP-utilising enzyme, N-terminal ILQ33_15535 PF00391 PEP-utilising enzyme, mobile domain ILQ33_15535 PF03610 PTS system fructose IIA component ILQ33_15545 PF01497 Periplasmic binding protein ILQ33_15550 PF01032 FecCD transport family ILQ33_15555 PF00005 ABC transporter ILQ33_15565 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ILQ33_15565 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ILQ33_15575 PF04226 Transglycosylase associated protein ILQ33_15595 PF01464 Transglycosylase SLT domain ILQ33_15600 PF02016 LD-carboxypeptidase N-terminal domain ILQ33_15600 PF17676 LD-carboxypeptidase C-terminal domain ILQ33_15605 PF03471 Transporter associated domain ILQ33_15605 PF02080 TrkA-C domain ILQ33_15605 PF00999 Sodium/hydrogen exchanger family ILQ33_15615 PF00842 Alanine racemase, C-terminal domain ILQ33_15615 PF01168 Alanine racemase, N-terminal domain ILQ33_15620 PF01266 FAD dependent oxidoreductase ILQ33_15625 PF04293 SpoVR like protein ILQ33_15630 PF00392 Bacterial regulatory proteins, gntR family ILQ33_15630 PF07840 FadR C-terminal domain ILQ33_15635 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ILQ33_15640 PF02600 Disulfide bond formation protein DsbB ILQ33_15645 PF13438 Domain of unknown function (DUF4113) ILQ33_15645 PF00817 impB/mucB/samB family ILQ33_15645 PF11798 IMS family HHH motif ILQ33_15645 PF11799 impB/mucB/samB family C-terminal domain ILQ33_15650 PF00717 Peptidase S24-like ILQ33_15655 PF06109 Haemolysin E (HlyE) ILQ33_15660 PF03692 Putative zinc- or iron-chelating domain ILQ33_15665 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILQ33_15670 PF05166 YcgL domain ILQ33_15680 PF04151 Bacterial pre-peptidase C-terminal domain ILQ33_15685 PF05666 Fels-1 Prophage Protein-like ILQ33_15690 PF03775 Septum formation inhibitor MinC, C-terminal domain ILQ33_15690 PF05209 Septum formation inhibitor MinC, N-terminal domain ILQ33_15695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ILQ33_15700 PF03776 Septum formation topological specificity factor MinE ILQ33_15720 PF01278 Omptin family ILQ33_15725 PF00561 alpha/beta hydrolase fold ILQ33_15730 PF13007 Transposase C of IS166 homeodomain ILQ33_15730 PF13817 IS66 C-terminal element ILQ33_15730 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_15730 PF03050 Transposase IS66 family ILQ33_15735 PF05717 IS66 Orf2 like protein ILQ33_15745 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ33_15750 PF08242 Methyltransferase domain ILQ33_15755 PF10685 Stress-induced bacterial acidophilic repeat motif ILQ33_15760 PF05974 Domain of unknown function (DUF892) ILQ33_15765 PF05974 Domain of unknown function (DUF892) ILQ33_15770 PF05067 Manganese containing catalase ILQ33_15775 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ33_15780 PF03335 Phage tail fibre repeat ILQ33_15780 PF08400 Prophage tail fibre N-terminal ILQ33_15780 PF07484 Phage Tail Collar Domain ILQ33_15785 PF06316 Enterobacterial Ail/Lom protein ILQ33_15815 PF06791 Prophage tail length tape measure protein ILQ33_15855 PF03864 Phage major capsid protein E ILQ33_15865 PF01972 Serine dehydrogenase proteinase ILQ33_15865 PF01957 NfeD-like C-terminal, partner-binding ILQ33_15875 PF02831 gpW ILQ33_15880 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ33_15885 PF07471 Phage DNA packaging protein Nu1 ILQ33_15890 PF13132 Domain of unknown function (DUF3950) ILQ33_15900 PF07166 Protein of unknown function (DUF1398) ILQ33_15905 PF06291 Bor protein ILQ33_15910 PF06085 Lipoprotein Rz1 precursor ILQ33_15935 PF05866 Endodeoxyribonuclease RusA ILQ33_15940 PF07102 Protein of unknown function (DUF1364) ILQ33_15955 PF07508 Recombinase ILQ33_15955 PF13408 Recombinase zinc beta ribbon domain ILQ33_15955 PF00239 Resolvase, N terminal domain ILQ33_15965 PF00893 Small Multidrug Resistance protein ILQ33_15975 PF06992 Replication protein P ILQ33_15990 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ33_15990 PF00589 Phage integrase family ILQ33_15995 PF00180 Isocitrate/isopropylmalate dehydrogenase ILQ33_16000 PF00849 RNA pseudouridylate synthase ILQ33_16005 PF00293 NUDIX domain ILQ33_16015 PF04356 Protein of unknown function (DUF489) ILQ33_16020 PF00206 Lyase ILQ33_16020 PF08328 Adenylosuccinate lyase C-terminal ILQ33_16025 PF00486 Transcriptional regulatory protein, C terminal ILQ33_16025 PF00072 Response regulator receiver domain ILQ33_16030 PF08918 PhoQ Sensor ILQ33_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_16040 PF07471 Phage DNA packaging protein Nu1 ILQ33_16055 PF03864 Phage major capsid protein E ILQ33_16070 PF06069 PerC transcriptional activator ILQ33_16130 PF08007 Cupin superfamily protein ILQ33_16135 PF07687 Peptidase dimerisation domain ILQ33_16135 PF01546 Peptidase family M20/M25/M40 ILQ33_16140 PF08402 TOBE domain ILQ33_16140 PF00005 ABC transporter ILQ33_16145 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_16300 PF13132 Domain of unknown function (DUF3950) ILQ33_16330 PF00959 Phage lysozyme ILQ33_16335 PF07041 Protein of unknown function (DUF1327) ILQ33_16340 PF04971 Bacteriophage P21 holin S ILQ33_16355 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_16370 PF03589 Antitermination protein ILQ33_16375 PF05866 Endodeoxyribonuclease RusA ILQ33_16380 PF06147 Protein of unknown function (DUF968) ILQ33_16390 PF01848 Hok/gef family ILQ33_16435 PF07789 Protein of unknown function (DUF1627) ILQ33_16455 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ILQ33_16465 PF07151 Protein of unknown function (DUF1391) ILQ33_16485 PF00589 Phage integrase family ILQ33_16485 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ33_16490 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_16495 PF13416 Bacterial extracellular solute-binding protein ILQ33_16500 PF02146 Sir2 family ILQ33_16505 PF00480 ROK family ILQ33_16510 PF02687 FtsX-like permease family ILQ33_16510 PF12704 MacB-like periplasmic core domain ILQ33_16515 PF00005 ABC transporter ILQ33_16520 PF12704 MacB-like periplasmic core domain ILQ33_16520 PF02687 FtsX-like permease family ILQ33_16525 PF01757 Acyltransferase family ILQ33_16530 PF00271 Helicase conserved C-terminal domain ILQ33_16530 PF03461 TRCF domain ILQ33_16530 PF00270 DEAD/DEAH box helicase ILQ33_16530 PF17757 UvrB interaction domain ILQ33_16530 PF02559 CarD-like/TRCF domain ILQ33_16535 PF03734 L,D-transpeptidase catalytic domain ILQ33_16535 PF17969 L,D-transpeptidase C-terminal domain ILQ33_16535 PF01476 LysM domain ILQ33_16540 PF07338 Protein of unknown function (DUF1471) ILQ33_16545 PF00440 Bacterial regulatory proteins, tetR family ILQ33_16550 PF05433 Glycine zipper 2TM domain ILQ33_16555 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_16560 PF05728 Uncharacterised protein family (UPF0227) ILQ33_16565 PF00933 Glycosyl hydrolase family 3 N terminal domain ILQ33_16570 PF01636 Phosphotransferase enzyme family ILQ33_16575 PF13036 Peptidoglycan-synthase activator LpoB ILQ33_16580 PF07233 Protein of unknown function (DUF1425) ILQ33_16585 PF01230 HIT domain ILQ33_16595 PF07715 TonB-dependent Receptor Plug Domain ILQ33_16595 PF00593 TonB dependent receptor ILQ33_16600 PF00367 phosphotransferase system, EIIB ILQ33_16600 PF02378 Phosphotransferase system, EIIC ILQ33_16605 PF01026 TatD related DNase ILQ33_16610 PF09115 DNA polymerase III, delta subunit, C terminal ILQ33_16615 PF02223 Thymidylate kinase ILQ33_16620 PF02618 YceG-like family ILQ33_16625 PF01063 Amino-transferase class IV ILQ33_16630 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ33_16630 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ33_16635 PF00550 Phosphopantetheine attachment site ILQ33_16645 PF00698 Acyl transferase domain ILQ33_16650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ILQ33_16650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ILQ33_16655 PF02504 Fatty acid synthesis protein ILQ33_16660 PF01783 Ribosomal L32p protein family ILQ33_16665 PF02620 Large ribosomal RNA subunit accumulation protein YceD ILQ33_16670 PF02545 Maf-like protein ILQ33_16675 PF00849 RNA pseudouridylate synthase ILQ33_16675 PF01479 S4 domain ILQ33_16680 PF12111 Polyribonucleotide phosphorylase C terminal ILQ33_16680 PF10150 Ribonuclease E/G family ILQ33_16680 PF00575 S1 RNA binding domain ILQ33_16685 PF00669 Bacterial flagellin N-terminal helical region ILQ33_16690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ33_16690 PF00460 Flagella basal body rod protein ILQ33_16695 PF10135 Rod binding protein ILQ33_16695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ILQ33_16700 PF02119 Flagellar P-ring protein ILQ33_16705 PF02107 Flagellar L-ring protein ILQ33_16710 PF00460 Flagella basal body rod protein ILQ33_16710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ33_16715 PF00460 Flagella basal body rod protein ILQ33_16715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ33_16720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ33_16720 PF07559 Flagellar basal body protein FlaE ILQ33_16720 PF00460 Flagella basal body rod protein ILQ33_16725 PF03963 Flagellar hook capping protein - N-terminal region ILQ33_16725 PF13860 FlgD Ig-like domain ILQ33_16725 PF13861 FlgD Tudor-like domain ILQ33_16730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ33_16730 PF00460 Flagella basal body rod protein ILQ33_16735 PF00460 Flagella basal body rod protein ILQ33_16740 PF13144 Chaperone for flagella basal body P-ring formation ILQ33_16745 PF04316 Anti-sigma-28 factor, FlgM ILQ33_16750 PF05130 FlgN protein ILQ33_16755 PF03023 Lipid II flippase MurJ ILQ33_16760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ33_16765 PF04337 Protein of unknown function, DUF480 ILQ33_16770 PF13302 Acetyltransferase (GNAT) domain ILQ33_16775 PF07690 Major Facilitator Superfamily ILQ33_16780 PF04399 Glutaredoxin 2, C terminal domain ILQ33_16780 PF13417 Glutathione S-transferase, N-terminal domain ILQ33_16785 PF07273 Protein of unknown function (DUF1439) ILQ33_16790 PF01979 Amidohydrolase family ILQ33_16795 PF06183 DinI-like family ILQ33_16800 PF13991 BssS protein family ILQ33_16805 PF01266 FAD dependent oxidoreductase ILQ33_16810 PF10968 Protein of unknown function (DUF2770) ILQ33_16815 PF01292 Prokaryotic cytochrome b561 ILQ33_16820 PF04264 YceI-like domain ILQ33_16825 PF00581 Rhodanese-like domain ILQ33_16825 PF12368 Rhodanase C-terminal ILQ33_16825 PF17773 UPF0176 acylphosphatase like domain ILQ33_16830 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ33_16840 PF13984 MsyB protein ILQ33_16845 PF07119 Protein of unknown function (DUF1375) ILQ33_16850 PF00535 Glycosyl transferase family 2 ILQ33_16855 PF04349 Periplasmic glucan biosynthesis protein, MdoG ILQ33_16860 PF01757 Acyltransferase family ILQ33_16865 PF13091 PLD-like domain ILQ33_16870 PF01661 Macro domain ILQ33_16880 PF10610 Thin aggregative fimbriae synthesis protein ILQ33_16885 PF07012 Curlin associated repeat ILQ33_16890 PF07012 Curlin associated repeat ILQ33_16895 PF00196 Bacterial regulatory proteins, luxR family ILQ33_16900 PF10627 Curli assembly protein CsgE ILQ33_16905 PF10614 Type VIII secretion system (T8SS), CsgF protein ILQ33_16910 PF03783 Curli production assembly/transport component CsgG ILQ33_16915 PF06496 Protein of unknown function (DUF1097) ILQ33_16920 PF02613 Nitrate reductase delta subunit ILQ33_16925 PF02811 PHP domain ILQ33_16930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ33_16955 PF06755 CbtA_toxin of type IV toxin-antitoxin system ILQ33_16960 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ILQ33_16965 PF06174 Protein of unknown function (DUF987) ILQ33_16970 PF04002 RadC-like JAB domain ILQ33_16975 PF03230 Antirestriction protein ILQ33_16980 PF06067 Domain of unknown function (DUF932) ILQ33_16990 PF13990 YjcZ-like protein ILQ33_16995 PF00350 Dynamin family ILQ33_17000 PF03797 Autotransporter beta-domain ILQ33_17000 PF16168 Adhesin of bacterial autotransporter system, probable stalk ILQ33_17000 PF13018 Extended Signal Peptide of Type V secretion system ILQ33_17040 PF02195 ParB-like nuclease domain ILQ33_17045 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ33_17045 PF11922 Domain of unknown function (DUF3440) ILQ33_17050 PF13195 Protein of unknown function (DUF4011) ILQ33_17050 PF13087 AAA domain ILQ33_17050 PF13086 AAA domain ILQ33_17060 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ILQ33_17060 PF17287 POTRA domain ILQ33_17060 PF08479 POTRA domain, ShlB-type ILQ33_17105 PF06722 Protein of unknown function (DUF1205) ILQ33_17145 PF07715 TonB-dependent Receptor Plug Domain ILQ33_17145 PF00593 TonB dependent receptor ILQ33_17155 PF02342 TerD domain ILQ33_17160 PF02342 TerD domain ILQ33_17165 PF02342 TerD domain ILQ33_17170 PF03741 Integral membrane protein TerC family ILQ33_17175 PF05099 Tellurite resistance protein TerB ILQ33_17180 PF02342 TerD domain ILQ33_17185 PF02342 TerD domain ILQ33_17205 PF11202 Phosphoribosyl transferase (PRTase) ILQ33_17205 PF15608 PELOTA RNA binding domain ILQ33_17240 PF13007 Transposase C of IS166 homeodomain ILQ33_17240 PF13817 IS66 C-terminal element ILQ33_17240 PF03050 Transposase IS66 family ILQ33_17240 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_17245 PF05717 IS66 Orf2 like protein ILQ33_17275 PF01197 Ribosomal protein L31 ILQ33_17290 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ33_17295 PF01730 UreF ILQ33_17300 PF05194 UreE urease accessory protein, C-terminal domain ILQ33_17300 PF02814 UreE urease accessory protein, N-terminal domain ILQ33_17305 PF01979 Amidohydrolase family ILQ33_17305 PF00449 Urease alpha-subunit, N-terminal domain ILQ33_17310 PF00699 Urease beta subunit ILQ33_17315 PF00547 Urease, gamma subunit ILQ33_17320 PF01774 UreD urease accessory protein ILQ33_17330 PF08019 Phosphoethanolamine transferase EptA/EptB ILQ33_17330 PF00884 Sulfatase ILQ33_17335 PF01219 Prokaryotic diacylglycerol kinase ILQ33_17350 PF05818 Enterobacterial TraT complement resistance protein ILQ33_17370 PF05717 IS66 Orf2 like protein ILQ33_17375 PF13007 Transposase C of IS166 homeodomain ILQ33_17375 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_17375 PF03050 Transposase IS66 family ILQ33_17375 PF13817 IS66 C-terminal element ILQ33_17400 PF13148 Protein of unknown function (DUF3987) ILQ33_17425 PF00589 Phage integrase family ILQ33_17425 PF13356 Arm DNA-binding domain ILQ33_17460 PF00005 ABC transporter ILQ33_17475 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ33_17475 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ33_17480 PF01571 Aminomethyltransferase folate-binding domain ILQ33_17480 PF08669 Glycine cleavage T-protein C-terminal barrel domain ILQ33_17490 PF07977 FabA-like domain ILQ33_17495 PF00106 short chain dehydrogenase ILQ33_17500 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ33_17505 PF17287 POTRA domain ILQ33_17505 PF08479 POTRA domain, ShlB-type ILQ33_17505 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ILQ33_17510 PF13332 Hemagglutinin repeat ILQ33_17510 PF05860 haemagglutination activity domain ILQ33_17510 PF04829 Pre-toxin domain with VENN motif ILQ33_17510 PF13018 Extended Signal Peptide of Type V secretion system ILQ33_17520 PF16970 Type-1 fimbrial protein, A ILQ33_17525 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_17525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_17530 PF00577 Outer membrane usher protein ILQ33_17530 PF13954 PapC N-terminal domain ILQ33_17530 PF13953 PapC C-terminal domain ILQ33_17540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_17540 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_17550 PF00486 Transcriptional regulatory protein, C terminal ILQ33_17560 PF00563 EAL domain ILQ33_17560 PF12792 CSS motif domain associated with EAL ILQ33_17565 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_17565 PF17158 Membrane-associated sensor, integral membrane domain ILQ33_17575 PF14883 Hypothetical glycosyl hydrolase family 13 ILQ33_17575 PF01522 Polysaccharide deacetylase ILQ33_17580 PF00535 Glycosyl transferase family 2 ILQ33_17585 PF13994 PgaD-like protein ILQ33_17590 PF02562 PhoH-like protein ILQ33_17595 PF04261 Dyp-type peroxidase family ILQ33_17600 PF09375 Imelysin ILQ33_17600 PF13473 Cupredoxin-like domain ILQ33_17605 PF03239 Iron permease FTR1 family ILQ33_17615 PF00474 Sodium:solute symporter family ILQ33_17625 PF01619 Proline dehydrogenase ILQ33_17625 PF00171 Aldehyde dehydrogenase family ILQ33_17625 PF14850 DNA-binding domain of Proline dehydrogenase ILQ33_17625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ILQ33_17630 PF08362 YcdC-like protein, C-terminal region ILQ33_17630 PF00440 Bacterial regulatory proteins, tetR family ILQ33_17635 PF00296 Luciferase-like monooxygenase ILQ33_17640 PF00857 Isochorismatase family ILQ33_17645 PF01042 Endoribonuclease L-PSP ILQ33_17650 PF12146 Serine aminopeptidase, S33 ILQ33_17655 PF00881 Nitroreductase family ILQ33_17660 PF01613 Flavin reductase like domain ILQ33_17665 PF00860 Permease family ILQ33_17670 PF10685 Stress-induced bacterial acidophilic repeat motif ILQ33_17675 PF03358 NADPH-dependent FMN reductase ILQ33_17680 PF13993 YccJ-like protein ILQ33_17685 PF00328 Histidine phosphatase superfamily (branch 2) ILQ33_17695 PF00226 DnaJ domain ILQ33_17695 PF01556 DnaJ C terminal domain ILQ33_17705 PF02613 Nitrate reductase delta subunit ILQ33_17710 PF18364 Molybdopterin oxidoreductase N-terminal domain ILQ33_17710 PF01568 Molydopterin dinucleotide binding domain ILQ33_17710 PF00384 Molybdopterin oxidoreductase ILQ33_17715 PF03264 NapC/NirT cytochrome c family, N-terminal region ILQ33_17720 PF00486 Transcriptional regulatory protein, C terminal ILQ33_17720 PF00072 Response regulator receiver domain ILQ33_17725 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ33_17730 PF01627 Hpt domain ILQ33_17730 PF00072 Response regulator receiver domain ILQ33_17730 PF00672 HAMP domain ILQ33_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_17730 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_17735 PF12801 4Fe-4S binding domain ILQ33_17740 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system ILQ33_17745 PF15939 Putative antitoxin of bacterial toxin-antitoxin system ILQ33_17755 PF00313 'Cold-shock' DNA-binding domain ILQ33_17760 PF00313 'Cold-shock' DNA-binding domain ILQ33_17770 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF ILQ33_17775 PF06251 Capsule biosynthesis GfcC ILQ33_17780 PF06082 Exopolysaccharide biosynthesis protein YbjH ILQ33_17785 PF10531 SLBB domain ILQ33_17785 PF02563 Polysaccharide biosynthesis/export protein ILQ33_17785 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ILQ33_17790 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILQ33_17795 PF13614 AAA domain ILQ33_17795 PF02706 Chain length determinant protein ILQ33_17795 PF13807 G-rich domain on putative tyrosine kinase ILQ33_17800 PF00328 Histidine phosphatase superfamily (branch 2) ILQ33_17805 PF08173 Membrane bound YbgT-like protein ILQ33_17810 PF02322 Cytochrome bd terminal oxidase subunit II ILQ33_17815 PF01654 Cytochrome bd terminal oxidase subunit I ILQ33_17820 PF04809 HupH hydrogenase expression protein, C-terminal conserved region ILQ33_17825 PF07449 Hydrogenase-1 expression protein HyaE ILQ33_17830 PF01750 Hydrogenase maturation protease ILQ33_17835 PF01292 Prokaryotic cytochrome b561 ILQ33_17840 PF00374 Nickel-dependent hydrogenase ILQ33_17845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ33_17845 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ILQ33_17865 PF08400 Prophage tail fibre N-terminal ILQ33_17865 PF07484 Phage Tail Collar Domain ILQ33_17865 PF03335 Phage tail fibre repeat ILQ33_17870 PF06316 Enterobacterial Ail/Lom protein ILQ33_17880 PF00080 Copper/zinc superoxide dismutase (SODC) ILQ33_17925 PF03864 Phage major capsid protein E ILQ33_17935 PF01343 Peptidase family S49 ILQ33_17945 PF02831 gpW ILQ33_17960 PF13007 Transposase C of IS166 homeodomain ILQ33_17960 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_17960 PF03050 Transposase IS66 family ILQ33_17960 PF13817 IS66 C-terminal element ILQ33_17965 PF05717 IS66 Orf2 like protein ILQ33_17980 PF04971 Bacteriophage P21 holin S ILQ33_17990 PF00959 Phage lysozyme ILQ33_18005 PF06069 PerC transcriptional activator ILQ33_18010 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_18030 PF12833 Helix-turn-helix domain ILQ33_18045 PF06530 Phage antitermination protein Q ILQ33_18050 PF05866 Endodeoxyribonuclease RusA ILQ33_18055 PF06147 Protein of unknown function (DUF968) ILQ33_18065 PF01848 Hok/gef family ILQ33_18080 PF07789 Protein of unknown function (DUF1627) ILQ33_18085 PF01695 IstB-like ATP binding protein ILQ33_18110 PF01381 Helix-turn-helix ILQ33_18110 PF00717 Peptidase S24-like ILQ33_18125 PF07151 Protein of unknown function (DUF1391) ILQ33_18140 PF05358 DicB protein ILQ33_18145 PF07358 Protein of unknown function (DUF1482) ILQ33_18165 PF01027 Inhibitor of apoptosis-promoting Bax1 ILQ33_18170 PF04358 DsrC like protein ILQ33_18175 PF00708 Acylphosphatase ILQ33_18180 PF10672 S-adenosylmethionine-dependent methyltransferase ILQ33_18180 PF17785 PUA-like domain ILQ33_18185 PF08755 Hemimethylated DNA-binding protein YccV like ILQ33_18190 PF13380 CoA binding domain ILQ33_18195 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ILQ33_18200 PF02142 MGS-like domain ILQ33_18205 PF12462 DNA helicase IV / RNA helicase N terminal ILQ33_18205 PF13361 UvrD-like helicase C-terminal domain ILQ33_18205 PF00580 UvrD/REP helicase N-terminal domain ILQ33_18210 PF03733 Inner membrane component domain ILQ33_18215 PF12805 FUSC-like inner membrane protein yccS ILQ33_18220 PF04993 TfoX N-terminal domain ILQ33_18220 PF04994 TfoX C-terminal domain ILQ33_18225 PF03846 Cell division inhibitor SulA ILQ33_18230 PF00691 OmpA family ILQ33_18230 PF01389 OmpA-like transmembrane domain ILQ33_18235 PF06303 MatP N-terminal domain ILQ33_18235 PF17414 MatP C-terminal ribbon-helix-helix domain ILQ33_18240 PF13654 AAA domain ILQ33_18240 PF05362 Lon protease (S16) C-terminal proteolytic domain ILQ33_18245 PF07977 FabA-like domain ILQ33_18250 PF04957 Ribosome modulation factor ILQ33_18255 PF03886 ABC-type transport auxiliary lipoprotein component ILQ33_18260 PF02470 MlaD protein ILQ33_18265 PF04403 Paraquat-inducible protein A ILQ33_18270 PF00005 ABC transporter ILQ33_18270 PF12848 ABC transporter ILQ33_18270 PF16326 ABC transporter C-terminal domain ILQ33_18275 PF10672 S-adenosylmethionine-dependent methyltransferase ILQ33_18275 PF02926 THUMP domain ILQ33_18275 PF01170 Putative RNA methylase family UPF0020 ILQ33_18280 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ33_18280 PF03473 MOSC domain ILQ33_18280 PF03476 MOSC N-terminal beta barrel domain ILQ33_18285 PF07126 Cell-division protein ZapC ILQ33_18290 PF01180 Dihydroorotate dehydrogenase ILQ33_18300 PF00419 Fimbrial protein ILQ33_18305 PF00419 Fimbrial protein ILQ33_18310 PF00419 Fimbrial protein ILQ33_18320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_18320 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_18325 PF00419 Fimbrial protein ILQ33_18330 PF03358 NADPH-dependent FMN reductase ILQ33_18335 PF09084 NMT1/THI5 like ILQ33_18340 PF00296 Luciferase-like monooxygenase ILQ33_18345 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_18350 PF00005 ABC transporter ILQ33_18355 PF11940 Domain of unknown function (DUF3458) Ig-like fold ILQ33_18355 PF01433 Peptidase family M1 domain ILQ33_18355 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ILQ33_18360 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ILQ33_18360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ILQ33_18365 PF01336 OB-fold nucleic acid binding domain ILQ33_18365 PF00152 tRNA synthetases class II (D, K and N) ILQ33_18370 PF00267 Gram-negative porin ILQ33_18375 PF00155 Aminotransferase class I and II ILQ33_18380 PF00753 Metallo-beta-lactamase superfamily ILQ33_18385 PF05951 Bacterial protein of unknown function (DUF882) ILQ33_18390 PF01471 Putative peptidoglycan binding domain ILQ33_18390 PF03734 L,D-transpeptidase catalytic domain ILQ33_18395 PF16330 MukB hinge domain ILQ33_18395 PF04310 MukB N-terminal ILQ33_18400 PF04288 MukE-like family ILQ33_18405 PF17192 MukF middle domain ILQ33_18405 PF17193 MukF C-terminal domain ILQ33_18405 PF03882 MukF winged-helix domain ILQ33_18415 PF02698 DUF218 domain ILQ33_18420 PF01636 Phosphotransferase enzyme family ILQ33_18425 PF02348 Cytidylyltransferase ILQ33_18430 PF03966 Trm112p-like protein ILQ33_18435 PF06224 Winged helix DNA-binding domain ILQ33_18440 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ILQ33_18445 PF00005 ABC transporter ILQ33_18445 PF00664 ABC transporter transmembrane region ILQ33_18450 PF03772 Competence protein ILQ33_18450 PF00753 Metallo-beta-lactamase superfamily ILQ33_18455 PF00216 Bacterial DNA-binding protein ILQ33_18460 PF00575 S1 RNA binding domain ILQ33_18465 PF02224 Cytidylate kinase ILQ33_18470 PF01435 Peptidase family M48 ILQ33_18475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILQ33_18480 PF00266 Aminotransferase class-V ILQ33_18485 PF04239 Protein of unknown function (DUF421) ILQ33_18490 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ILQ33_18490 PF18381 YcaO cyclodehydratase C-terminal domain ILQ33_18495 PF01226 Formate/nitrite transporter ILQ33_18500 PF02901 Pyruvate formate lyase-like ILQ33_18500 PF01228 Glycine radical ILQ33_18505 PF04055 Radical SAM superfamily ILQ33_18515 PF13520 Amino acid permease ILQ33_18520 PF07690 Major Facilitator Superfamily ILQ33_18525 PF00857 Isochorismatase family ILQ33_18530 PF04976 DMSO reductase anchor subunit (DmsC) ILQ33_18535 PF12800 4Fe-4S binding domain ILQ33_18535 PF13247 4Fe-4S dicluster domain ILQ33_18540 PF01568 Molydopterin dinucleotide binding domain ILQ33_18540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ33_18540 PF00384 Molybdopterin oxidoreductase ILQ33_18545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILQ33_18545 PF02403 Seryl-tRNA synthetase N-terminal domain ILQ33_18550 PF00004 ATPase family associated with various cellular activities (AAA) ILQ33_18550 PF16193 AAA C-terminal domain ILQ33_18550 PF12002 MgsA AAA+ ATPase C terminal ILQ33_18555 PF03548 Outer membrane lipoprotein carrier protein LolA ILQ33_18560 PF01580 FtsK/SpoIIIE family ILQ33_18560 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ILQ33_18560 PF17854 FtsK alpha domain ILQ33_18560 PF09397 Ftsk gamma domain ILQ33_18565 PF01037 Lrp/AsnC ligand binding domain ILQ33_18570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_18575 PF00664 ABC transporter transmembrane region ILQ33_18575 PF00005 ABC transporter ILQ33_18580 PF00005 ABC transporter ILQ33_18580 PF00664 ABC transporter transmembrane region ILQ33_18585 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ILQ33_18590 PF01176 Translation initiation factor 1A / IF-1 ILQ33_18600 PF17871 AAA lid domain ILQ33_18600 PF00004 ATPase family associated with various cellular activities (AAA) ILQ33_18600 PF07724 AAA domain (Cdc48 subfamily) ILQ33_18600 PF02861 Clp amino terminal domain, pathogenicity island component ILQ33_18600 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ33_18605 PF02617 ATP-dependent Clp protease adaptor protein ClpS ILQ33_18610 PF00313 'Cold-shock' DNA-binding domain ILQ33_18615 PF02687 FtsX-like permease family ILQ33_18615 PF00005 ABC transporter ILQ33_18615 PF12704 MacB-like periplasmic core domain ILQ33_18620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_18625 PF04393 Protein of unknown function (DUF535) ILQ33_18630 PF11398 Protein of unknown function (DUF2813) ILQ33_18635 PF00230 Major intrinsic protein ILQ33_18640 PF03956 Lysine exporter LysO ILQ33_18645 PF03063 Prismane/CO dehydrogenase family ILQ33_18650 PF00970 Oxidoreductase FAD-binding domain ILQ33_18650 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ33_18650 PF00175 Oxidoreductase NAD-binding domain ILQ33_18655 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ33_18655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ33_18655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_18660 PF01212 Beta-eliminating lyase ILQ33_18665 PF13460 NAD(P)H-binding ILQ33_18665 PF11066 Protein of unknown function (DUF2867) ILQ33_18670 PF01370 NAD dependent epimerase/dehydratase family ILQ33_18675 PF01510 N-acetylmuramoyl-L-alanine amidase ILQ33_18680 PF01906 Putative heavy-metal-binding ILQ33_18690 PF12883 Protein of unknown function (DUF3828) ILQ33_18695 PF00005 ABC transporter ILQ33_18700 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_18705 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_18710 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_18715 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_18730 PF03611 PTS system sugar-specific permease component ILQ33_18735 PF05958 tRNA (Uracil-5-)-methyltransferase ILQ33_18740 PF10767 Protein of unknown function (DUF2593) ILQ33_18745 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_18750 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_18755 PF00005 ABC transporter ILQ33_18755 PF08402 TOBE domain ILQ33_18760 PF13416 Bacterial extracellular solute-binding protein ILQ33_18765 PF10722 Putative bacterial sensory transduction regulator ILQ33_18770 PF08443 RimK-like ATP-grasp domain ILQ33_18770 PF18030 RimK PreATP-grasp domain ILQ33_18775 PF00881 Nitroreductase family ILQ33_18780 PF07214 Protein of unknown function (DUF1418) ILQ33_18785 PF00462 Glutaredoxin ILQ33_18790 PF11045 Putative inner membrane protein of Enterobacteriaceae ILQ33_18795 PF06826 Predicted Permease Membrane Region ILQ33_18795 PF02080 TrkA-C domain ILQ33_18800 PF00440 Bacterial regulatory proteins, tetR family ILQ33_18805 PF07690 Major Facilitator Superfamily ILQ33_18820 PF07690 Major Facilitator Superfamily ILQ33_18825 PF01569 PAP2 superfamily ILQ33_18830 PF08220 DeoR-like helix-turn-helix domain ILQ33_18830 PF00455 DeoR C terminal sensor domain ILQ33_18835 PF00768 D-alanyl-D-alanine carboxypeptidase ILQ33_18835 PF07943 Penicillin-binding protein 5, C-terminal domain ILQ33_18840 PF13417 Glutathione S-transferase, N-terminal domain ILQ33_18840 PF00043 Glutathione S-transferase, C-terminal domain ILQ33_18845 PF07995 Glucose / Sorbosone dehydrogenase ILQ33_18850 PF10799 Biofilm formation protein (YliH/bssR) ILQ33_18855 PF00919 Uncharacterized protein family UPF0004 ILQ33_18855 PF18693 TRAM domain ILQ33_18855 PF04055 Radical SAM superfamily ILQ33_18870 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_18870 PF17156 Gammaproteobacterial periplasmic sensor domain ILQ33_18875 PF00563 EAL domain ILQ33_18875 PF17153 Periplasmic sensor domain, extracellular ILQ33_18880 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_18880 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ33_18885 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_18890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_18895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ33_18895 PF00005 ABC transporter ILQ33_18905 PF00994 Probable molybdopterin binding domain ILQ33_18905 PF03454 MoeA C-terminal region (domain IV) ILQ33_18905 PF03453 MoeA N-terminal region (domain I and II) ILQ33_18910 PF00899 ThiF family ILQ33_18915 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ33_18920 PF04055 Radical SAM superfamily ILQ33_18935 PF07350 Protein of unknown function (DUF1479) ILQ33_18940 PF12848 ABC transporter ILQ33_18940 PF00005 ABC transporter ILQ33_18945 PF17969 L,D-transpeptidase C-terminal domain ILQ33_18945 PF03734 L,D-transpeptidase catalytic domain ILQ33_18950 PF03600 Citrate transporter ILQ33_18955 PF02742 Iron dependent repressor, metal binding and dimerisation domain ILQ33_18955 PF01325 Iron dependent repressor, N-terminal DNA binding domain ILQ33_18965 PF00884 Sulfatase ILQ33_18970 PF13505 Outer membrane protein beta-barrel domain ILQ33_18980 PF00892 EamA-like transporter family ILQ33_18985 PF00210 Ferritin-like domain ILQ33_18990 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_18995 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_19000 PF00005 ABC transporter ILQ33_19005 PF00924 Mechanosensitive ion channel ILQ33_19010 PF05971 RNA methyltransferase ILQ33_19015 PF07338 Protein of unknown function (DUF1471) ILQ33_19020 PF00593 TonB dependent receptor ILQ33_19020 PF07715 TonB-dependent Receptor Plug Domain ILQ33_19025 PF13640 2OG-Fe(II) oxygenase superfamily ILQ33_19025 PF18331 PKHD-type hydroxylase C-terminal domain ILQ33_19030 PF01258 Prokaryotic dksA/traR C4-type zinc finger ILQ33_19035 PF07338 Protein of unknown function (DUF1471) ILQ33_19040 PF02615 Malate/L-lactate dehydrogenase ILQ33_19045 PF02885 Glycosyl transferase family, helical bundle domain ILQ33_19050 PF06733 DEAD_2 ILQ33_19050 PF00270 DEAD/DEAH box helicase ILQ33_19050 PF13307 Helicase C-terminal domain ILQ33_19060 PF00271 Helicase conserved C-terminal domain ILQ33_19060 PF00270 DEAD/DEAH box helicase ILQ33_19065 PF09209 Tetracyclin repressor-like, C-terminal domain ILQ33_19065 PF00440 Bacterial regulatory proteins, tetR family ILQ33_19070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_19075 PF00005 ABC transporter ILQ33_19090 PF11076 Putative inner membrane protein YbhQ ILQ33_19095 PF03372 Endonuclease/Exonuclease/phosphatase family ILQ33_19100 PF13091 PLD-like domain ILQ33_19105 PF03706 Lysylphosphatidylglycerol synthase TM region ILQ33_19110 PF01027 Inhibitor of apoptosis-promoting Bax1 ILQ33_19115 PF01027 Inhibitor of apoptosis-promoting Bax1 ILQ33_19120 PF02391 MoaE protein ILQ33_19125 PF02597 ThiS family ILQ33_19130 PF01967 MoaC family ILQ33_19135 PF00994 Probable molybdopterin binding domain ILQ33_19140 PF06463 Molybdenum Cofactor Synthesis C ILQ33_19140 PF04055 Radical SAM superfamily ILQ33_19145 PF01933 Uncharacterised protein family UPF0052 ILQ33_19150 PF02151 UvrB/uvrC motif ILQ33_19150 PF12344 Ultra-violet resistance protein B ILQ33_19150 PF17757 UvrB interaction domain ILQ33_19150 PF04851 Type III restriction enzyme, res subunit ILQ33_19150 PF00271 Helicase conserved C-terminal domain ILQ33_19160 PF08241 Methyltransferase domain ILQ33_19165 PF00155 Aminotransferase class I and II ILQ33_19170 PF06968 Biotin and Thiamin Synthesis associated domain ILQ33_19170 PF04055 Radical SAM superfamily ILQ33_19175 PF00202 Aminotransferase class-III ILQ33_19180 PF01161 Phosphatidylethanolamine-binding protein ILQ33_19200 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ33_19225 PF08400 Prophage tail fibre N-terminal ILQ33_19225 PF03335 Phage tail fibre repeat ILQ33_19225 PF07484 Phage Tail Collar Domain ILQ33_19230 PF06316 Enterobacterial Ail/Lom protein ILQ33_19300 PF00574 Clp protease ILQ33_19335 PF03245 Bacteriophage Rz lysis protein ILQ33_19340 PF00959 Phage lysozyme ILQ33_19345 PF04971 Bacteriophage P21 holin S ILQ33_19385 PF00149 Calcineurin-like phosphoesterase ILQ33_19450 PF00589 Phage integrase family ILQ33_19450 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ33_19455 PF01095 Pectinesterase ILQ33_19460 PF00694 Aconitase C-terminal domain ILQ33_19460 PF00330 Aconitase family (aconitate hydratase) ILQ33_19465 PF00939 Sodium:sulfate symporter transmembrane region ILQ33_19475 PF04303 PrpF protein ILQ33_19480 PF03466 LysR substrate binding domain ILQ33_19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_19485 PF10282 Lactonase, 7-bladed beta-propeller ILQ33_19495 PF03459 TOBE domain ILQ33_19495 PF00005 ABC transporter ILQ33_19500 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_19510 PF10766 Multidrug efflux pump-associated protein AcrZ ILQ33_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_19515 PF03459 TOBE domain ILQ33_19520 PF00005 ABC transporter ILQ33_19525 PF16363 GDP-mannose 4,6 dehydratase ILQ33_19530 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ILQ33_19530 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ILQ33_19535 PF10509 Galactokinase galactose-binding signature ILQ33_19535 PF00288 GHMP kinases N terminal domain ILQ33_19535 PF08544 GHMP kinases C terminal ILQ33_19540 PF01263 Aldose 1-epimerase ILQ33_19545 PF00300 Histidine phosphatase superfamily (branch 1) ILQ33_19550 PF00793 DAHP synthetase I family ILQ33_19555 PF13985 YbgS-like protein ILQ33_19560 PF01545 Cation efflux family ILQ33_19565 PF04973 Nicotinamide mononucleotide transporter ILQ33_19570 PF02445 Quinolinate synthetase A protein ILQ33_19605 PF16331 TolA binding protein trimerisation ILQ33_19605 PF13174 Tetratricopeptide repeat ILQ33_19610 PF00691 OmpA family ILQ33_19615 PF07676 WD40-like Beta Propeller Repeat ILQ33_19615 PF04052 TolB amino-terminal domain ILQ33_19620 PF06519 TolA C-terminal ILQ33_19625 PF02472 Biopolymer transport protein ExbD/TolR ILQ33_19630 PF01618 MotA/TolQ/ExbB proton channel family ILQ33_19635 PF03061 Thioesterase superfamily ILQ33_19640 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ILQ33_19645 PF08173 Membrane bound YbgT-like protein ILQ33_19650 PF02322 Cytochrome bd terminal oxidase subunit II ILQ33_19655 PF01654 Cytochrome bd terminal oxidase subunit I ILQ33_19670 PF02310 B12 binding domain ILQ33_19675 PF13941 MutL protein ILQ33_19680 PF06368 Methylaspartate mutase E chain (MutE) ILQ33_19685 PF07476 Methylaspartate ammonia-lyase C-terminus ILQ33_19685 PF05034 Methylaspartate ammonia-lyase N-terminus ILQ33_19700 PF00375 Sodium:dicarboxylate symporter family ILQ33_19705 PF05683 Fumarase C-terminus ILQ33_19705 PF05681 Fumarate hydratase (Fumerase) ILQ33_19710 PF12557 Cob(I)alamin adenosyltransferase N terminal ILQ33_19710 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ILQ33_19715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_19715 PF03466 LysR substrate binding domain ILQ33_19720 PF02629 CoA binding domain ILQ33_19720 PF00549 CoA-ligase ILQ33_19725 PF00549 CoA-ligase ILQ33_19725 PF08442 ATP-grasp domain ILQ33_19730 PF02817 e3 binding domain ILQ33_19730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILQ33_19730 PF00364 Biotin-requiring enzyme ILQ33_19735 PF02779 Transketolase, pyrimidine binding domain ILQ33_19735 PF00676 Dehydrogenase E1 component ILQ33_19735 PF16078 2-oxoglutarate dehydrogenase N-terminus ILQ33_19735 PF16870 2-oxoglutarate dehydrogenase C-terminal ILQ33_19740 PF13085 2Fe-2S iron-sulfur cluster binding domain ILQ33_19745 PF02910 Fumarate reductase flavoprotein C-term ILQ33_19745 PF00890 FAD binding domain ILQ33_19750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILQ33_19755 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILQ33_19765 PF00285 Citrate synthase, C-terminal domain ILQ33_19770 PF00419 Fimbrial protein ILQ33_19775 PF13953 PapC C-terminal domain ILQ33_19775 PF13954 PapC N-terminal domain ILQ33_19775 PF00577 Outer membrane usher protein ILQ33_19780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_19780 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_19785 PF00419 Fimbrial protein ILQ33_19790 PF05145 Transition state regulatory protein AbrB ILQ33_19795 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ILQ33_19795 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ILQ33_19795 PF06827 Zinc finger found in FPG and IleRS ILQ33_19800 PF03746 LamB/YcsF family ILQ33_19805 PF02626 Carboxyltransferase domain, subdomain A and B ILQ33_19810 PF02682 Carboxyltransferase domain, subdomain C and D ILQ33_19815 PF01784 NIF3 (NGG1p interacting factor 3) ILQ33_19820 PF00854 POT family ILQ33_19825 PF03441 FAD binding domain of DNA photolyase ILQ33_19825 PF00875 DNA photolyase ILQ33_19830 PF08349 Protein of unknown function (DUF1722) ILQ33_19840 PF15631 NTF2 fold immunity protein ILQ33_19850 PF15606 Bacterial toxin 34 ILQ33_19850 PF05593 RHS Repeat ILQ33_19850 PF03527 RHS protein ILQ33_19855 PF10725 Protein of unknown function (DUF2517) ILQ33_19860 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ILQ33_19865 PF03814 Potassium-transporting ATPase A subunit ILQ33_19875 PF02669 K+-transporting ATPase, c chain ILQ33_19880 PF13492 GAF domain ILQ33_19880 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_19880 PF13493 Domain of unknown function (DUF4118) ILQ33_19880 PF02702 Osmosensitive K+ channel His kinase sensor domain ILQ33_19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_19885 PF00072 Response regulator receiver domain ILQ33_19885 PF00486 Transcriptional regulatory protein, C terminal ILQ33_19895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ33_19895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ33_19895 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ33_19900 PF13520 Amino acid permease ILQ33_19905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ33_19905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ33_19905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ33_19905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ33_19910 PF17206 SeqA protein N-terminal domain ILQ33_19910 PF03925 SeqA protein C-terminal domain ILQ33_19915 PF12697 Alpha/beta hydrolase family ILQ33_19920 PF01402 Ribbon-helix-helix protein, copG family ILQ33_19925 PF00258 Flavodoxin ILQ33_19935 PF01475 Ferric uptake regulator family ILQ33_19940 PF13982 YbfN-like lipoprotein ILQ33_19950 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILQ33_19950 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ILQ33_19955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ILQ33_19955 PF00367 phosphotransferase system, EIIB ILQ33_19955 PF02378 Phosphotransferase system, EIIC ILQ33_19960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ILQ33_19965 PF01979 Amidohydrolase family ILQ33_19970 PF01047 MarR family ILQ33_19970 PF00480 ROK family ILQ33_19975 PF13344 Haloacid dehalogenase-like hydrolase ILQ33_19980 PF13537 Glutamine amidotransferase domain ILQ33_19980 PF00733 Asparagine synthase ILQ33_20020 PF01494 FAD binding domain ILQ33_20025 PF00919 Uncharacterized protein family UPF0004 ILQ33_20025 PF01938 TRAM domain ILQ33_20025 PF04055 Radical SAM superfamily ILQ33_20030 PF02562 PhoH-like protein ILQ33_20035 PF02130 Uncharacterized protein family UPF0054 ILQ33_20040 PF00571 CBS domain ILQ33_20040 PF03471 Transporter associated domain ILQ33_20045 PF00795 Carbon-nitrogen hydrolase ILQ33_20050 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ33_20055 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_20060 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_20065 PF00005 ABC transporter ILQ33_20070 PF01156 Inosine-uridine preferring nucleoside hydrolase ILQ33_20075 PF00012 Hsp70 protein ILQ33_20085 PF06889 Protein of unknown function (DUF1266) ILQ33_20090 PF08238 Sel1 repeat ILQ33_20100 PF06889 Protein of unknown function (DUF1266) ILQ33_20110 PF07295 Zinc-ribbon containing domain ILQ33_20115 PF00133 tRNA synthetases class I (I, L, M and V) ILQ33_20115 PF08264 Anticodon-binding domain of tRNA ILQ33_20115 PF13603 Leucyl-tRNA synthetase, Domain 2 ILQ33_20120 PF04390 Lipopolysaccharide-assembly ILQ33_20125 PF06144 DNA polymerase III, delta subunit ILQ33_20125 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ILQ33_20130 PF01467 Cytidylyltransferase-like ILQ33_20135 PF00300 Histidine phosphatase superfamily (branch 1) ILQ33_20145 PF02590 Predicted SPOUT methyltransferase ILQ33_20150 PF03717 Penicillin-binding Protein dimerisation domain ILQ33_20150 PF00905 Penicillin binding protein transpeptidase domain ILQ33_20155 PF01098 Cell cycle protein ILQ33_20160 PF03330 Lytic transglycolase ILQ33_20160 PF05036 Sporulation related domain ILQ33_20165 PF00768 D-alanyl-D-alanine carboxypeptidase ILQ33_20165 PF07943 Penicillin-binding protein 5, C-terminal domain ILQ33_20170 PF04359 Protein of unknown function (DUF493) ILQ33_20175 PF03099 Biotin/lipoate A/B protein ligase family ILQ33_20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_20180 PF03466 LysR substrate binding domain ILQ33_20185 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ILQ33_20185 PF04055 Radical SAM superfamily ILQ33_20190 PF02416 mttA/Hcf106 family ILQ33_20195 PF00795 Carbon-nitrogen hydrolase ILQ33_20200 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ILQ33_20205 PF00313 'Cold-shock' DNA-binding domain ILQ33_20210 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ILQ33_20215 PF03606 C4-dicarboxylate anaerobic carrier ILQ33_20220 PF12431 Transcriptional regulator ILQ33_20220 PF00072 Response regulator receiver domain ILQ33_20225 PF17203 Single cache domain 3 ILQ33_20225 PF00989 PAS fold ILQ33_20225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_20225 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ILQ33_20230 PF08218 Citrate lyase ligase C-terminal domain ILQ33_20235 PF06857 Malonate decarboxylase delta subunit (MdcD) ILQ33_20240 PF03328 HpcH/HpaI aldolase/citrate lyase family ILQ33_20245 PF04223 Citrate lyase, alpha subunit (CitF) ILQ33_20250 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ILQ33_20255 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ILQ33_20260 PF00939 Sodium:sulfate symporter transmembrane region ILQ33_20265 PF00445 Ribonuclease T2 family ILQ33_20270 PF14760 Rnk N-terminus ILQ33_20270 PF01272 Transcription elongation factor, GreA/GreB, C-term ILQ33_20275 PF00107 Zinc-binding dehydrogenase ILQ33_20275 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_20275 PF13823 Alcohol dehydrogenase GroES-associated ILQ33_20280 PF00582 Universal stress protein family ILQ33_20285 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_20285 PF13192 Thioredoxin domain ILQ33_20290 PF10417 C-terminal domain of 1-Cys peroxiredoxin ILQ33_20290 PF00578 AhpC/TSA family ILQ33_20295 PF13098 Thioredoxin-like domain ILQ33_20300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_20300 PF03466 LysR substrate binding domain ILQ33_20305 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ33_20305 PF11922 Domain of unknown function (DUF3440) ILQ33_20310 PF02195 ParB-like nuclease domain ILQ33_20315 PF00155 Aminotransferase class I and II ILQ33_20320 PF00465 Iron-containing alcohol dehydrogenase ILQ33_20325 PF04328 Selenoprotein, putative ILQ33_20330 PF02554 Carbon starvation protein CstA ILQ33_20330 PF13722 5TM C-terminal transporter carbon starvation CstA ILQ33_20335 PF03061 Thioesterase superfamily ILQ33_20345 PF00857 Isochorismatase family ILQ33_20345 PF00550 Phosphopantetheine attachment site ILQ33_20350 PF00501 AMP-binding enzyme ILQ33_20350 PF13193 AMP-binding enzyme C-terminal domain ILQ33_20355 PF00425 chorismate binding enzyme ILQ33_20360 PF01497 Periplasmic binding protein ILQ33_20365 PF05977 Transmembrane secretion effector ILQ33_20370 PF01032 FecCD transport family ILQ33_20375 PF01032 FecCD transport family ILQ33_20380 PF00005 ABC transporter ILQ33_20385 PF02706 Chain length determinant protein ILQ33_20390 PF00501 AMP-binding enzyme ILQ33_20390 PF00975 Thioesterase domain ILQ33_20390 PF00550 Phosphopantetheine attachment site ILQ33_20390 PF00668 Condensation domain ILQ33_20395 PF03621 MbtH-like protein ILQ33_20400 PF00756 Putative esterase ILQ33_20400 PF11806 Domain of unknown function (DUF3327) ILQ33_20405 PF00593 TonB dependent receptor ILQ33_20405 PF07715 TonB-dependent Receptor Plug Domain ILQ33_20410 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ33_20410 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ILQ33_20415 PF01848 Hok/gef family ILQ33_20420 PF01848 Hok/gef family ILQ33_20425 PF04107 Glutamate-cysteine ligase family 2(GCS2) ILQ33_20430 PF06643 Protein of unknown function (DUF1158) ILQ33_20435 PF04237 YjbR ILQ33_20440 PF00881 Nitroreductase family ILQ33_20445 PF00924 Mechanosensitive ion channel ILQ33_20450 PF00324 Amino acid permease ILQ33_20455 PF00873 AcrB/AcrD/AcrF family ILQ33_20460 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_20460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_20465 PF11604 Copper binding periplasmic protein CusF ILQ33_20470 PF02321 Outer membrane efflux protein ILQ33_20475 PF00486 Transcriptional regulatory protein, C terminal ILQ33_20475 PF00072 Response regulator receiver domain ILQ33_20480 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_20480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_20480 PF00672 HAMP domain ILQ33_20485 PF04717 Type VI secretion system, phage-baseplate injector ILQ33_20495 PF05488 PAAR motif ILQ33_20495 PF05593 RHS Repeat ILQ33_20505 PF05488 PAAR motif ILQ33_20505 PF05593 RHS Repeat ILQ33_20515 PF13808 DDE_Tnp_1-associated ILQ33_20515 PF01609 Transposase DDE domain ILQ33_20520 PF13632 Glycosyl transferase family group 2 ILQ33_20520 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILQ33_20525 PF13283 Bacteriophage N adsorption protein A C-term ILQ33_20530 PF14488 Domain of unknown function (DUF4434) ILQ33_20535 PF12833 Helix-turn-helix domain ILQ33_20545 PF00072 Response regulator receiver domain ILQ33_20545 PF00196 Bacterial regulatory proteins, luxR family ILQ33_20550 PF00419 Fimbrial protein ILQ33_20555 PF00419 Fimbrial protein ILQ33_20560 PF13954 PapC N-terminal domain ILQ33_20560 PF00577 Outer membrane usher protein ILQ33_20560 PF13953 PapC C-terminal domain ILQ33_20565 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_20565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_20570 PF00419 Fimbrial protein ILQ33_20575 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ILQ33_20575 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ILQ33_20585 PF04307 LexA-binding, inner membrane-associated putative hydrolase ILQ33_20590 PF09190 DALR domain ILQ33_20590 PF01406 tRNA synthetases class I (C) catalytic domain ILQ33_20595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILQ33_20600 PF00149 Calcineurin-like phosphoesterase ILQ33_20605 PF00731 AIR carboxylase ILQ33_20610 PF02222 ATP-grasp domain ILQ33_20610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ILQ33_20615 PF00696 Amino acid kinase family ILQ33_20620 PF11392 Protein of unknown function (DUF2877) ILQ33_20625 PF06545 Protein of unknown function (DUF1116) ILQ33_20630 PF00549 CoA-ligase ILQ33_20630 PF02629 CoA binding domain ILQ33_20635 PF02615 Malate/L-lactate dehydrogenase ILQ33_20640 PF01546 Peptidase family M20/M25/M40 ILQ33_20645 PF07883 Cupin domain ILQ33_20645 PF05899 Protein of unknown function (DUF861) ILQ33_20650 PF02595 Glycerate kinase family ILQ33_20655 PF00860 Permease family ILQ33_20665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILQ33_20670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ33_20670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILQ33_20675 PF01261 Xylose isomerase-like TIM barrel ILQ33_20680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ33_20680 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ33_20680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_20685 PF01614 Bacterial transcriptional regulator ILQ33_20685 PF09339 IclR helix-turn-helix domain ILQ33_20690 PF04115 Ureidoglycolate lyase ILQ33_20695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_20695 PF03466 LysR substrate binding domain ILQ33_20715 PF03527 RHS protein ILQ33_20715 PF05593 RHS Repeat ILQ33_20715 PF14220 Domain of unknown function (DUF4329) ILQ33_20725 PF00005 ABC transporter ILQ33_20730 PF13472 GDSL-like Lipase/Acylhydrolase family ILQ33_20735 PF00106 short chain dehydrogenase ILQ33_20740 PF00085 Thioredoxin ILQ33_20745 PF03649 Uncharacterised protein family (UPF0014) ILQ33_20750 PF00005 ABC transporter ILQ33_20755 PF16200 C-terminal region of band_7 ILQ33_20755 PF01145 SPFH domain / Band 7 family ILQ33_20760 PF01957 NfeD-like C-terminal, partner-binding ILQ33_20780 PF13411 MerR HTH family regulatory protein ILQ33_20785 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_20790 PF00005 ABC transporter ILQ33_20790 PF00664 ABC transporter transmembrane region ILQ33_20790 PF03412 Peptidase C39 family ILQ33_20815 PF13520 Amino acid permease ILQ33_20820 PF04960 Glutaminase ILQ33_20825 PF00403 Heavy-metal-associated domain ILQ33_20830 PF01381 Helix-turn-helix ILQ33_20835 PF01963 TraB family ILQ33_20840 PF04073 Aminoacyl-tRNA editing domain ILQ33_20845 PF00149 Calcineurin-like phosphoesterase ILQ33_20845 PF02872 5'-nucleotidase, C-terminal domain ILQ33_20850 PF07690 Major Facilitator Superfamily ILQ33_20855 PF00999 Sodium/hydrogen exchanger family ILQ33_20855 PF02254 TrkA-N domain ILQ33_20860 PF00294 pfkB family carbohydrate kinase ILQ33_20865 PF07859 alpha/beta hydrolase fold ILQ33_20870 PF00762 Ferrochelatase ILQ33_20875 PF05191 Adenylate kinase, active site lid ILQ33_20880 PF00183 Hsp90 protein ILQ33_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_20885 PF13662 Toprim domain ILQ33_20885 PF02132 RecR protein ILQ33_20890 PF02575 YbaB/EbfC DNA-binding family ILQ33_20895 PF12169 DNA polymerase III subunits gamma and tau domain III ILQ33_20895 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ILQ33_20895 PF12170 DNA polymerase III tau subunit V interacting with alpha ILQ33_20900 PF00156 Phosphoribosyl transferase domain ILQ33_20905 PF04304 Protein of unknown function (DUF454) ILQ33_20910 PF07445 Primosomal replication protein priC ILQ33_20915 PF10689 Protein of unknown function (DUF2496) ILQ33_20920 PF00924 Mechanosensitive ion channel ILQ33_20920 PF12794 Mechanosensitive ion channel inner membrane domain 1 ILQ33_20920 PF12795 Mechanosensitive ion channel porin domain ILQ33_20925 PF00440 Bacterial regulatory proteins, tetR family ILQ33_20925 PF08361 MAATS-type transcriptional repressor, C-terminal region ILQ33_20930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_20930 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_20935 PF00873 AcrB/AcrD/AcrF family ILQ33_20940 PF10757 Biofilm formation regulator YbaJ ILQ33_20945 PF05321 Haemolysin expression modulating protein ILQ33_20950 PF14602 Hexapeptide repeat of succinyl-transferase ILQ33_20950 PF12464 Maltose acetyltransferase ILQ33_20955 PF10777 Inner membrane protein YlaC ILQ33_20960 PF00563 EAL domain ILQ33_20960 PF12792 CSS motif domain associated with EAL ILQ33_20965 PF07237 Protein of unknown function (DUF1428) ILQ33_20975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILQ33_20980 PF09619 Type III secretion system lipoprotein chaperone (YscW) ILQ33_20990 PF00909 Ammonium Transporter Family ILQ33_20995 PF00543 Nitrogen regulatory protein P-II ILQ33_21000 PF00664 ABC transporter transmembrane region ILQ33_21000 PF00005 ABC transporter ILQ33_21005 PF00664 ABC transporter transmembrane region ILQ33_21005 PF00005 ABC transporter ILQ33_21010 PF01037 Lrp/AsnC ligand binding domain ILQ33_21010 PF13404 AsnC-type helix-turn-helix domain ILQ33_21020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_21020 PF12793 Sugar transport-related sRNA regulator N-term ILQ33_21025 PF06508 Queuosine biosynthesis protein QueC ILQ33_21040 PF13145 PPIC-type PPIASE domain ILQ33_21045 PF00216 Bacterial DNA-binding protein ILQ33_21050 PF05362 Lon protease (S16) C-terminal proteolytic domain ILQ33_21050 PF00004 ATPase family associated with various cellular activities (AAA) ILQ33_21050 PF02190 ATP-dependent protease La (LON) substrate-binding domain ILQ33_21055 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ33_21055 PF07724 AAA domain (Cdc48 subfamily) ILQ33_21055 PF06689 ClpX C4-type zinc finger ILQ33_21060 PF00574 Clp protease ILQ33_21065 PF05697 Bacterial trigger factor protein (TF) ILQ33_21065 PF05698 Bacterial trigger factor protein (TF) C-terminus ILQ33_21065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ33_21070 PF01722 BolA-like protein ILQ33_21075 PF03923 Uncharacterized lipoprotein ILQ33_21075 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ILQ33_21080 PF07690 Major Facilitator Superfamily ILQ33_21085 PF06481 COX Aromatic Rich Motif ILQ33_21085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ILQ33_21090 PF00115 Cytochrome C and Quinol oxidase polypeptide I ILQ33_21095 PF00510 Cytochrome c oxidase subunit III ILQ33_21100 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ILQ33_21105 PF01040 UbiA prenyltransferase family ILQ33_21110 PF07690 Major Facilitator Superfamily ILQ33_21115 PF04461 Protein of unknown function (DUF520) ILQ33_21120 PF08546 Ketopantoate reductase PanE/ApbA C terminal ILQ33_21120 PF02558 Ketopantoate reductase PanE/ApbA ILQ33_21125 PF01965 DJ-1/PfpI family ILQ33_21130 PF02568 Thiamine biosynthesis protein (ThiI) ILQ33_21130 PF02926 THUMP domain ILQ33_21135 PF02609 Exonuclease VII small subunit ILQ33_21140 PF00348 Polyprenyl synthetase ILQ33_21145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ILQ33_21145 PF02779 Transketolase, pyrimidine binding domain ILQ33_21145 PF02780 Transketolase, C-terminal domain ILQ33_21150 PF00248 Aldo/keto reductase family ILQ33_21160 PF04608 Phosphatidylglycerophosphatase A ILQ33_21165 PF02769 AIR synthase related protein, C-terminal domain ILQ33_21165 PF00586 AIR synthase related protein, N-terminal domain ILQ33_21170 PF01029 NusB family ILQ33_21175 PF00885 6,7-dimethyl-8-ribityllumazine synthase ILQ33_21180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILQ33_21180 PF01872 RibD C-terminal domain ILQ33_21185 PF03477 ATP cone domain ILQ33_21190 PF11622 Protein of unknown function (DUF3251) ILQ33_21195 PF03502 Nucleoside-specific channel-forming protein, Tsx ILQ33_21200 PF01844 HNH endonuclease ILQ33_21210 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ILQ33_21215 PF02355 Protein export membrane protein ILQ33_21215 PF07549 SecD/SecF GG Motif ILQ33_21220 PF13721 SecD export protein N-terminal TM region ILQ33_21220 PF07549 SecD/SecF GG Motif ILQ33_21220 PF02355 Protein export membrane protein ILQ33_21225 PF02699 Preprotein translocase subunit ILQ33_21230 PF01702 Queuine tRNA-ribosyltransferase ILQ33_21235 PF02547 Queuosine biosynthesis protein ILQ33_21240 PF04336 Acyl carrier protein phosphodiesterase ILQ33_21250 PF02903 Alpha amylase, N-terminal ig-like domain ILQ33_21250 PF00128 Alpha amylase, catalytic domain ILQ33_21255 PF00324 Amino acid permease ILQ33_21260 PF05525 Branched-chain amino acid transport protein ILQ33_21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_21265 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_21265 PF00989 PAS fold ILQ33_21265 PF11808 Phosphate regulon sensor protein PhoR ILQ33_21270 PF00072 Response regulator receiver domain ILQ33_21270 PF00486 Transcriptional regulatory protein, C terminal ILQ33_21275 PF00149 Calcineurin-like phosphoesterase ILQ33_21275 PF12320 Type 5 capsule protein repressor C-terminal domain ILQ33_21280 PF13476 AAA domain ILQ33_21285 PF07690 Major Facilitator Superfamily ILQ33_21290 PF00480 ROK family ILQ33_21295 PF04381 Putative exonuclease, RdgC ILQ33_21305 PF10971 Protein of unknown function (DUF2773) ILQ33_21310 PF06865 Pyrimidine/purine nucleoside phosphorylase ILQ33_21315 PF07302 AroM protein ILQ33_21320 PF16362 YaiA protein ILQ33_21325 PF01202 Shikimate kinase ILQ33_21330 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ILQ33_21335 PF03807 NADP oxidoreductase coenzyme F420-dependent ILQ33_21335 PF14748 Pyrroline-5-carboxylate reductase dimerisation ILQ33_21340 PF05230 MASE2 domain ILQ33_21340 PF00990 Diguanylate cyclase, GGDEF domain ILQ33_21345 PF07769 psiF repeat ILQ33_21350 PF00245 Alkaline phosphatase ILQ33_21355 PF10796 Sigma-S stabilisation anti-adaptor protein ILQ33_21365 PF01820 D-ala D-ala ligase N-terminus ILQ33_21365 PF07478 D-ala D-ala ligase C-terminus ILQ33_21370 PF10953 Protein of unknown function (DUF2754) ILQ33_21375 PF10954 Protein of unknown function (DUF2755) ILQ33_21380 PF07759 Protein of unknown function (DUF1615) ILQ33_21385 PF05992 SbmA/BacA-like family ILQ33_21390 PF00144 Beta-lactamase ILQ33_21395 PF15977 Winged helix-turn-helix DNA binding ILQ33_21400 PF03797 Autotransporter beta-domain ILQ33_21400 PF03212 Pertactin ILQ33_21405 PF00490 Delta-aminolevulinic acid dehydratase ILQ33_21410 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ILQ33_21415 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_21420 PF00005 ABC transporter ILQ33_21425 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILQ33_21430 PF00196 Bacterial regulatory proteins, luxR family ILQ33_21430 PF00072 Response regulator receiver domain ILQ33_21435 PF05231 MASE1 ILQ33_21435 PF07730 Histidine kinase ILQ33_21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_21440 PF07690 Major Facilitator Superfamily ILQ33_21450 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_21455 PF00005 ABC transporter ILQ33_21455 PF08402 TOBE domain ILQ33_21460 PF02583 Metal-sensitive transcriptional repressor ILQ33_21465 PF00107 Zinc-binding dehydrogenase ILQ33_21465 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_21470 PF00756 Putative esterase ILQ33_21475 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ILQ33_21480 PF07690 Major Facilitator Superfamily ILQ33_21485 PF07836 DmpG-like communication domain ILQ33_21485 PF00682 HMGL-like ILQ33_21490 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ33_21490 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ILQ33_21495 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILQ33_21500 PF12697 Alpha/beta hydrolase family ILQ33_21505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ILQ33_21510 PF01494 FAD binding domain ILQ33_21515 PF09339 IclR helix-turn-helix domain ILQ33_21515 PF01614 Bacterial transcriptional regulator ILQ33_21520 PF12706 Beta-lactamase superfamily domain ILQ33_21530 PF00356 Bacterial regulatory proteins, lacI family ILQ33_21535 PF02929 Beta galactosidase small chain ILQ33_21535 PF16353 Domain of unknown function(DUF4981) ILQ33_21535 PF00703 Glycosyl hydrolases family 2 ILQ33_21535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ILQ33_21535 PF02837 Glycosyl hydrolases family 2, sugar binding domain ILQ33_21540 PF01306 LacY proton/sugar symporter ILQ33_21545 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_21545 PF12464 Maltose acetyltransferase ILQ33_21550 PF07690 Major Facilitator Superfamily ILQ33_21555 PF02560 Cyanate lyase C-terminal domain ILQ33_21560 PF00484 Carbonic anhydrase ILQ33_21565 PF03466 LysR substrate binding domain ILQ33_21565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_21570 PF07969 Amidohydrolase family ILQ33_21575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILQ33_21580 PF00501 AMP-binding enzyme ILQ33_21580 PF16177 Acetyl-coenzyme A synthetase N-terminus ILQ33_21580 PF13193 AMP-binding enzyme C-terminal domain ILQ33_21585 PF03972 MmgE/PrpD family ILQ33_21590 PF00285 Citrate synthase, C-terminal domain ILQ33_21600 PF00158 Sigma-54 interaction domain ILQ33_21600 PF06506 Propionate catabolism activator ILQ33_21600 PF02954 Bacterial regulatory protein, Fis family ILQ33_21605 PF07338 Protein of unknown function (DUF1471) ILQ33_21610 PF01810 LysE type translocator ILQ33_21625 PF00107 Zinc-binding dehydrogenase ILQ33_21625 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_21630 PF02653 Branched-chain amino acid transport system / permease component ILQ33_21635 PF02653 Branched-chain amino acid transport system / permease component ILQ33_21645 PF13407 Periplasmic binding protein domain ILQ33_21655 PF07969 Amidohydrolase family ILQ33_21660 PF00696 Amino acid kinase family ILQ33_21670 PF06545 Protein of unknown function (DUF1116) ILQ33_21675 PF02629 CoA binding domain ILQ33_21675 PF00549 CoA-ligase ILQ33_21680 PF11392 Protein of unknown function (DUF2877) ILQ33_21685 PF12796 Ankyrin repeats (3 copies) ILQ33_21700 PF00563 EAL domain ILQ33_21700 PF00196 Bacterial regulatory proteins, luxR family ILQ33_21705 PF03797 Autotransporter beta-domain ILQ33_21710 PF02028 BCCT, betaine/carnitine/choline family transporter ILQ33_21715 PF13977 BetI-type transcriptional repressor, C-terminal ILQ33_21715 PF00440 Bacterial regulatory proteins, tetR family ILQ33_21720 PF00171 Aldehyde dehydrogenase family ILQ33_21725 PF00732 GMC oxidoreductase ILQ33_21725 PF05199 GMC oxidoreductase ILQ33_21765 PF02589 LUD domain ILQ33_21770 PF02589 LUD domain ILQ33_21770 PF13183 4Fe-4S dicluster domain ILQ33_21770 PF11870 Domain of unknown function (DUF3390) ILQ33_21775 PF02754 Cysteine-rich domain ILQ33_21780 PF12852 Cupin ILQ33_21780 PF12833 Helix-turn-helix domain ILQ33_21785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ33_21785 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_21790 PF07338 Protein of unknown function (DUF1471) ILQ33_21795 PF04224 Protein of unknown function, DUF417 ILQ33_21800 PF00248 Aldo/keto reductase family ILQ33_21805 PF12833 Helix-turn-helix domain ILQ33_21810 PF11924 Inverse autotransporter, beta-domain ILQ33_21825 PF03466 LysR substrate binding domain ILQ33_21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_21830 PF12146 Serine aminopeptidase, S33 ILQ33_21835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILQ33_21845 PF03050 Transposase IS66 family ILQ33_21845 PF13007 Transposase C of IS166 homeodomain ILQ33_21845 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_21845 PF13817 IS66 C-terminal element ILQ33_21850 PF05717 IS66 Orf2 like protein ILQ33_21860 PF01197 Ribosomal protein L31 ILQ33_21865 PF00444 Ribosomal protein L36 ILQ33_21875 PF00196 Bacterial regulatory proteins, luxR family ILQ33_21880 PF16449 Fimbrillin MatB ILQ33_21885 PF18649 EcpB C-terminal domain ILQ33_21890 PF16967 E-set like domain ILQ33_21890 PF15976 CS1-pili formation C-terminal ILQ33_21900 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_21905 PF03692 Putative zinc- or iron-chelating domain ILQ33_21910 PF07274 Protein of unknown function (DUF1440) ILQ33_21915 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ33_21915 PF10518 TAT (twin-arginine translocation) pathway signal sequence ILQ33_21915 PF01799 [2Fe-2S] binding domain ILQ33_21920 PF00941 FAD binding domain in molybdopterin dehydrogenase ILQ33_21920 PF03450 CO dehydrogenase flavoprotein C-terminal domain ILQ33_21925 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILQ33_21925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILQ33_21930 PF02625 XdhC and CoxI family ILQ33_21930 PF13478 XdhC Rossmann domain ILQ33_21940 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ILQ33_21945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_21945 PF03466 LysR substrate binding domain ILQ33_21955 PF00106 short chain dehydrogenase ILQ33_21960 PF03466 LysR substrate binding domain ILQ33_21975 PF17345 Family of unknown function (DUF5375) ILQ33_22040 PF14659 Phage integrase, N-terminal SAM-like domain ILQ33_22040 PF00589 Phage integrase family ILQ33_22040 PF13356 Arm DNA-binding domain ILQ33_22050 PF12833 Helix-turn-helix domain ILQ33_22060 PF02796 Helix-turn-helix domain of resolvase ILQ33_22060 PF00239 Resolvase, N terminal domain ILQ33_22070 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ33_22075 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ33_22080 PF07484 Phage Tail Collar Domain ILQ33_22105 PF01381 Helix-turn-helix ILQ33_22105 PF00717 Peptidase S24-like ILQ33_22135 PF00171 Aldehyde dehydrogenase family ILQ33_22140 PF00696 Amino acid kinase family ILQ33_22140 PF01472 PUA domain ILQ33_22145 PF00267 Gram-negative porin ILQ33_22150 PF07417 Sigma factor-binding transcriptional regulator Crl ILQ33_22155 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ILQ33_22160 PF00156 Phosphoribosyl transferase domain ILQ33_22165 PF01546 Peptidase family M20/M25/M40 ILQ33_22165 PF07687 Peptidase dimerisation domain ILQ33_22180 PF13673 Acetyltransferase (GNAT) domain ILQ33_22185 PF13957 Toxin YafO, type II toxin-antitoxin system ILQ33_22195 PF11798 IMS family HHH motif ILQ33_22195 PF11799 impB/mucB/samB family C-terminal domain ILQ33_22195 PF00817 impB/mucB/samB family ILQ33_22200 PF00691 OmpA family ILQ33_22200 PF13677 Membrane MotB of proton-channel complex MotA/MotB ILQ33_22205 PF00771 FHIPEP family ILQ33_22215 PF00877 NlpC/P60 family ILQ33_22220 PF04221 RelB antitoxin ILQ33_22225 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ ILQ33_22230 PF03734 L,D-transpeptidase catalytic domain ILQ33_22235 PF13230 Glutamine amidotransferases class-II ILQ33_22240 PF13580 SIS domain ILQ33_22245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ33_22245 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ33_22245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILQ33_22245 PF09317 Domain of unknown function (DUF1974) ILQ33_22255 PF00795 Carbon-nitrogen hydrolase ILQ33_22260 PF13808 DDE_Tnp_1-associated ILQ33_22260 PF01609 Transposase DDE domain ILQ33_22280 PF01609 Transposase DDE domain ILQ33_22280 PF13808 DDE_Tnp_1-associated ILQ33_22300 PF14220 Domain of unknown function (DUF4329) ILQ33_22300 PF05593 RHS Repeat ILQ33_22300 PF03527 RHS protein ILQ33_22305 PF04717 Type VI secretion system, phage-baseplate injector ILQ33_22310 PF05638 Type VI secretion system effector, Hcp ILQ33_22325 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ILQ33_22335 PF05947 Type VI secretion system, TssF ILQ33_22355 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ILQ33_22365 PF17871 AAA lid domain ILQ33_22365 PF07724 AAA domain (Cdc48 subfamily) ILQ33_22365 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ33_22365 PF00004 ATPase family associated with various cellular activities (AAA) ILQ33_22380 PF06761 Intracellular multiplication and human macrophage-killing ILQ33_22380 PF06744 Type VI secretion protein IcmF C-terminal ILQ33_22380 PF14331 ImcF-related N-terminal domain ILQ33_22420 PF00929 Exonuclease ILQ33_22425 PF00075 RNase H ILQ33_22430 PF08241 Methyltransferase domain ILQ33_22435 PF16123 Hydroxyacylglutathione hydrolase C-terminus ILQ33_22435 PF00753 Metallo-beta-lactamase superfamily ILQ33_22440 PF01476 LysM domain ILQ33_22440 PF01464 Transglycosylase SLT domain ILQ33_22445 PF08241 Methyltransferase domain ILQ33_22450 PF03372 Endonuclease/Exonuclease/phosphatase family ILQ33_22455 PF03466 LysR substrate binding domain ILQ33_22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_22460 PF00248 Aldo/keto reductase family ILQ33_22500 PF00005 ABC transporter ILQ33_22500 PF09383 NIL domain ILQ33_22505 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_22510 PF03180 NLPA lipoprotein ILQ33_22515 PF16358 RcsF lipoprotein ILQ33_22520 PF18389 TrmO C-terminal domain ILQ33_22520 PF01980 tRNA-methyltransferase O ILQ33_22525 PF03129 Anticodon binding domain ILQ33_22525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILQ33_22525 PF04073 Aminoacyl-tRNA editing domain ILQ33_22530 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ILQ33_22535 PF17185 NlpE C-terminal OB domain ILQ33_22535 PF04170 NlpE N-terminal domain ILQ33_22540 PF00472 RF-1 domain ILQ33_22545 PF07152 YaeQ protein ILQ33_22550 PF06786 Uncharacterised protein family (UPF0253) ILQ33_22555 PF07073 Modulator of Rho-dependent transcription termination (ROF) ILQ33_22560 PF11734 TilS substrate C-terminal domain ILQ33_22560 PF09179 TilS substrate binding domain ILQ33_22560 PF01171 PP-loop family ILQ33_22565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILQ33_22570 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ33_22570 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ33_22570 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ33_22575 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ILQ33_22580 PF01336 OB-fold nucleic acid binding domain ILQ33_22580 PF14579 Helix-hairpin-helix motif ILQ33_22580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ILQ33_22580 PF07733 Bacterial DNA polymerase III alpha NTPase domain ILQ33_22580 PF02811 PHP domain ILQ33_22585 PF01351 Ribonuclease HII ILQ33_22590 PF02684 Lipid-A-disaccharide synthetase ILQ33_22595 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_22595 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ILQ33_22600 PF07977 FabA-like domain ILQ33_22605 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_22605 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ILQ33_22610 PF03938 Outer membrane protein (OmpH-like) ILQ33_22615 PF01103 Surface antigen ILQ33_22615 PF07244 Surface antigen variable number repeat ILQ33_22620 PF17820 PDZ domain ILQ33_22620 PF02163 Peptidase family M50 ILQ33_22630 PF01255 Putative undecaprenyl diphosphate synthase ILQ33_22635 PF13288 DXP reductoisomerase C-terminal domain ILQ33_22635 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ILQ33_22635 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ILQ33_22640 PF01765 Ribosome recycling factor ILQ33_22645 PF00696 Amino acid kinase family ILQ33_22650 PF00889 Elongation factor TS ILQ33_22655 PF00318 Ribosomal protein S2 ILQ33_22660 PF00557 Metallopeptidase family M24 ILQ33_22665 PF01909 Nucleotidyltransferase domain ILQ33_22665 PF01842 ACT domain ILQ33_22665 PF01966 HD domain ILQ33_22665 PF08335 GlnD PII-uridylyltransferase ILQ33_22670 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_22670 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ILQ33_22670 PF14602 Hexapeptide repeat of succinyl-transferase ILQ33_22675 PF11944 Protein of unknown function (DUF3461) ILQ33_22680 PF13556 PucR C-terminal helix-turn-helix domain ILQ33_22680 PF17853 GGDEF-like domain ILQ33_22680 PF05651 Putative sugar diacid recognition ILQ33_22685 PF00595 PDZ domain ILQ33_22690 PF01966 HD domain ILQ33_22695 PF01048 Phosphorylase superfamily ILQ33_22700 PF01497 Periplasmic binding protein ILQ33_22705 PF03458 UPF0126 domain ILQ33_22710 PF01521 Iron-sulphur cluster biosynthesis ILQ33_22720 PF00654 Voltage gated chloride channel ILQ33_22725 PF00202 Aminotransferase class-III ILQ33_22730 PF01032 FecCD transport family ILQ33_22735 PF01497 Periplasmic binding protein ILQ33_22740 PF00005 ABC transporter ILQ33_22745 PF07715 TonB-dependent Receptor Plug Domain ILQ33_22745 PF00593 TonB dependent receptor ILQ33_22750 PF00905 Penicillin binding protein transpeptidase domain ILQ33_22750 PF00912 Transglycosylase ILQ33_22750 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ILQ33_22750 PF14814 Bifunctional transglycosylase second domain ILQ33_22755 PF00271 Helicase conserved C-terminal domain ILQ33_22755 PF08482 ATP-dependent helicase C-terminal ILQ33_22755 PF00270 DEAD/DEAH box helicase ILQ33_22755 PF04408 Helicase associated domain (HA2) ILQ33_22760 PF02834 LigT like Phosphoesterase ILQ33_22765 PF17746 SfsA N-terminal OB domain ILQ33_22765 PF03749 Sugar fermentation stimulation protein RE domain ILQ33_22770 PF01258 Prokaryotic dksA/traR C4-type zinc finger ILQ33_22775 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILQ33_22780 PF12627 Probable RNA and SrmB- binding site of polymerase A ILQ33_22780 PF12626 Polymerase A arginine-rich C-terminus ILQ33_22780 PF01743 Poly A polymerase head domain ILQ33_22785 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ILQ33_22795 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_22795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_22800 PF00577 Outer membrane usher protein ILQ33_22800 PF13954 PapC N-terminal domain ILQ33_22800 PF13953 PapC C-terminal domain ILQ33_22805 PF00419 Fimbrial protein ILQ33_22810 PF00419 Fimbrial protein ILQ33_22825 PF02548 Ketopantoate hydroxymethyltransferase ILQ33_22830 PF02569 Pantoate-beta-alanine ligase ILQ33_22835 PF04754 Putative transposase, YhgA-like ILQ33_22840 PF02261 Aspartate decarboxylase ILQ33_22845 PF01522 Polysaccharide deacetylase ILQ33_22850 PF03610 PTS system fructose IIA component ILQ33_22855 PF01061 ABC-2 type transporter ILQ33_22860 PF00005 ABC transporter ILQ33_22865 PF00484 Carbonic anhydrase ILQ33_22870 PF00156 Phosphoribosyl transferase domain ILQ33_22875 PF01011 PQQ enzyme repeat ILQ33_22880 PF00394 Multicopper oxidase ILQ33_22880 PF07731 Multicopper oxidase ILQ33_22880 PF07732 Multicopper oxidase ILQ33_22885 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ILQ33_22890 PF17284 Spermidine synthase tetramerisation domain ILQ33_22895 PF02675 S-adenosylmethionine decarboxylase ILQ33_22900 PF06062 Uncharacterised protein family (UPF0231) ILQ33_22905 PF06434 Aconitate hydratase 2 N-terminus ILQ33_22905 PF00330 Aconitase family (aconitate hydratase) ILQ33_22905 PF11791 Aconitate B N-terminal domain ILQ33_22910 PF11737 Protein of unknown function (DUF3300) ILQ33_22915 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_22915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ33_22920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILQ33_22920 PF00364 Biotin-requiring enzyme ILQ33_22920 PF02817 e3 binding domain ILQ33_22925 PF00456 Transketolase, thiamine diphosphate binding domain ILQ33_22925 PF17831 Pyruvate dehydrogenase E1 component middle domain ILQ33_22930 PF07729 FCD domain ILQ33_22930 PF00392 Bacterial regulatory proteins, gntR family ILQ33_22935 PF00324 Amino acid permease ILQ33_22940 PF17113 Regulatory signalling modulator protein AmpE ILQ33_22945 PF01510 N-acetylmuramoyl-L-alanine amidase ILQ33_22950 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ILQ33_22950 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ILQ33_22955 PF07963 Prokaryotic N-terminal methylation motif ILQ33_22960 PF00437 Type II/IV secretion system protein ILQ33_22960 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILQ33_22965 PF00482 Type II secretion system (T2SS), protein F ILQ33_22970 PF00478 IMP dehydrogenase / GMP reductase domain ILQ33_22980 PF01121 Dephospho-CoA kinase ILQ33_22985 PF07072 Cell division protein ILQ33_22990 PF03884 DNA gyrase inhibitor YacG ILQ33_22995 PF00293 NUDIX domain ILQ33_23000 PF01043 SecA preprotein cross-linking domain ILQ33_23000 PF02810 SEC-C motif ILQ33_23000 PF07516 SecA Wing and Scaffold domain ILQ33_23000 PF07517 SecA DEAD-like domain ILQ33_23005 PF06558 Secretion monitor precursor protein (SecM) ILQ33_23010 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ILQ33_23015 PF12327 FtsZ family, C-terminal domain ILQ33_23015 PF00091 Tubulin/FtsZ family, GTPase domain ILQ33_23020 PF02491 SHS2 domain inserted in FTSA ILQ33_23025 PF03799 Cell division protein FtsQ ILQ33_23025 PF08478 POTRA domain, FtsQ-type ILQ33_23030 PF01820 D-ala D-ala ligase N-terminus ILQ33_23030 PF07478 D-ala D-ala ligase C-terminus ILQ33_23035 PF01225 Mur ligase family, catalytic domain ILQ33_23035 PF02875 Mur ligase family, glutamate ligase domain ILQ33_23035 PF08245 Mur ligase middle domain ILQ33_23040 PF04101 Glycosyltransferase family 28 C-terminal domain ILQ33_23040 PF03033 Glycosyltransferase family 28 N-terminal domain ILQ33_23045 PF01098 Cell cycle protein ILQ33_23050 PF08245 Mur ligase middle domain ILQ33_23050 PF02875 Mur ligase family, glutamate ligase domain ILQ33_23055 PF00953 Glycosyl transferase family 4 ILQ33_23055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ILQ33_23060 PF01225 Mur ligase family, catalytic domain ILQ33_23060 PF02875 Mur ligase family, glutamate ligase domain ILQ33_23060 PF08245 Mur ligase middle domain ILQ33_23065 PF01225 Mur ligase family, catalytic domain ILQ33_23065 PF02875 Mur ligase family, glutamate ligase domain ILQ33_23065 PF08245 Mur ligase middle domain ILQ33_23070 PF00905 Penicillin binding protein transpeptidase domain ILQ33_23070 PF03717 Penicillin-binding Protein dimerisation domain ILQ33_23075 PF04999 Cell division protein FtsL ILQ33_23080 PF01795 MraW methylase family ILQ33_23085 PF02381 MraZ protein, putative antitoxin-like ILQ33_23090 PF00356 Bacterial regulatory proteins, lacI family ILQ33_23090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ33_23100 PF10369 Small subunit of acetolactate synthase ILQ33_23105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_23105 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ33_23105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ33_23110 PF03466 LysR substrate binding domain ILQ33_23110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_23115 PF08054 Leucine operon leader peptide ILQ33_23120 PF08502 LeuA allosteric (dimerisation) domain ILQ33_23120 PF00682 HMGL-like ILQ33_23125 PF00180 Isocitrate/isopropylmalate dehydrogenase ILQ33_23130 PF00330 Aconitase family (aconitate hydratase) ILQ33_23135 PF00694 Aconitase C-terminal domain ILQ33_23145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ33_23145 PF12793 Sugar transport-related sRNA regulator N-term ILQ33_23160 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_23165 PF00005 ABC transporter ILQ33_23170 PF09335 SNARE associated Golgi protein ILQ33_23175 PF02311 AraC-like ligand binding domain ILQ33_23175 PF12833 Helix-turn-helix domain ILQ33_23180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ33_23185 PF11762 L-arabinose isomerase C-terminal domain ILQ33_23185 PF02610 L-arabinose isomerase ILQ33_23190 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ33_23195 PF03104 DNA polymerase family B, exonuclease domain ILQ33_23195 PF00136 DNA polymerase family B ILQ33_23200 PF00271 Helicase conserved C-terminal domain ILQ33_23200 PF12137 RNA polymerase recycling family C-terminal ILQ33_23200 PF18339 RapA N-terminal Tudor like domain 1 ILQ33_23200 PF18337 RapA N-terminal Tudor like domain ILQ33_23200 PF00176 SNF2 family N-terminal domain ILQ33_23205 PF00849 RNA pseudouridylate synthase ILQ33_23220 PF00226 DnaJ domain ILQ33_23220 PF05099 Tellurite resistance protein TerB ILQ33_23225 PF04453 LPS transport system D ILQ33_23225 PF03968 OstA-like protein ILQ33_23230 PF09312 SurA N-terminal domain ILQ33_23230 PF00639 PPIC-type PPIASE domain ILQ33_23235 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ILQ33_23240 PF00398 Ribosomal RNA adenine dimethylase ILQ33_23245 PF04379 ApaG domain ILQ33_23250 PF00149 Calcineurin-like phosphoesterase ILQ33_23265 PF00186 Dihydrofolate reductase ILQ33_23270 PF00999 Sodium/hydrogen exchanger family ILQ33_23270 PF02254 TrkA-N domain ILQ33_23275 PF02525 Flavodoxin-like fold ILQ33_23280 PF00083 Sugar (and other) transporter ILQ33_23290 PF01494 FAD binding domain ILQ33_23295 PF00766 Electron transfer flavoprotein FAD-binding domain ILQ33_23295 PF01012 Electron transfer flavoprotein domain ILQ33_23300 PF01012 Electron transfer flavoprotein domain ILQ33_23305 PF02028 BCCT, betaine/carnitine/choline family transporter ILQ33_23310 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ33_23310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILQ33_23310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ33_23315 PF02515 CoA-transferase family III ILQ33_23320 PF13193 AMP-binding enzyme C-terminal domain ILQ33_23320 PF00501 AMP-binding enzyme ILQ33_23325 PF00378 Enoyl-CoA hydratase/isomerase ILQ33_23330 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ33_23335 PF07180 CaiF/GrlA transcriptional regulator ILQ33_23340 PF02142 MGS-like domain ILQ33_23340 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ILQ33_23340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILQ33_23345 PF00117 Glutamine amidotransferase class-I ILQ33_23345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ILQ33_23350 PF01113 Dihydrodipicolinate reductase, N-terminus ILQ33_23350 PF05173 Dihydrodipicolinate reductase, C-terminus ILQ33_23355 PF01156 Inosine-uridine preferring nucleoside hydrolase ILQ33_23360 PF02401 LytB protein ILQ33_23365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ33_23370 PF01252 Signal peptidase (SPase) II ILQ33_23375 PF06827 Zinc finger found in FPG and IleRS ILQ33_23375 PF08264 Anticodon-binding domain of tRNA ILQ33_23375 PF00133 tRNA synthetases class I (I, L, M and V) ILQ33_23380 PF06574 FAD synthetase ILQ33_23380 PF01687 Riboflavin kinase ILQ33_23385 PF10837 Protein of unknown function (DUF2575) ILQ33_23390 PF01649 Ribosomal protein S20 ILQ33_23405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_23405 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_23410 PF13954 PapC N-terminal domain ILQ33_23410 PF00577 Outer membrane usher protein ILQ33_23410 PF13953 PapC C-terminal domain ILQ33_23420 PF03466 LysR substrate binding domain ILQ33_23420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_23425 PF06965 Na+/H+ antiporter 1 ILQ33_23430 PF01848 Hok/gef family ILQ33_23435 PF00226 DnaJ domain ILQ33_23435 PF00684 DnaJ central domain ILQ33_23435 PF01556 DnaJ C terminal domain ILQ33_23440 PF00012 Hsp70 protein ILQ33_23445 PF10807 Protein of unknown function (DUF2541) ILQ33_23450 PF03981 Ubiquinol-cytochrome C chaperone ILQ33_23450 PF13099 Domain of unknown function (DUF3944) ILQ33_23455 PF01184 GPR1/FUN34/yaaH family ILQ33_23460 PF00994 Probable molybdopterin binding domain ILQ33_23465 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ33_23470 PF01235 Sodium:alanine symporter family ILQ33_23475 PF03883 Peroxide stress protein YaaA ILQ33_23480 PF10697 Protein of unknown function (DUF2502) ILQ33_23485 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_23485 PF14821 Threonine synthase N terminus ILQ33_23490 PF08544 GHMP kinases C terminal ILQ33_23490 PF00288 GHMP kinases N terminal domain ILQ33_23495 PF01842 ACT domain ILQ33_23495 PF00696 Amino acid kinase family ILQ33_23495 PF13840 ACT domain ILQ33_23495 PF03447 Homoserine dehydrogenase, NAD binding domain ILQ33_23495 PF00742 Homoserine dehydrogenase ILQ33_23505 PF00588 SpoU rRNA Methylase family ILQ33_23515 PF00486 Transcriptional regulatory protein, C terminal ILQ33_23515 PF00072 Response regulator receiver domain ILQ33_23520 PF06123 Inner membrane protein CreD ILQ33_23525 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_23525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_23525 PF00672 HAMP domain ILQ33_23530 PF00486 Transcriptional regulatory protein, C terminal ILQ33_23530 PF00072 Response regulator receiver domain ILQ33_23535 PF05981 CreA protein ILQ33_23540 PF06445 GyrI-like small molecule binding domain ILQ33_23540 PF12833 Helix-turn-helix domain ILQ33_23545 PF00300 Histidine phosphatase superfamily (branch 1) ILQ33_23550 PF01931 Protein of unknown function DUF84 ILQ33_23555 PF01371 Trp repressor protein ILQ33_23560 PF01464 Transglycosylase SLT domain ILQ33_23560 PF14718 Soluble lytic murein transglycosylase L domain ILQ33_23565 PF12848 ABC transporter ILQ33_23565 PF00005 ABC transporter ILQ33_23575 PF13521 AAA domain ILQ33_23575 PF01381 Helix-turn-helix ILQ33_23580 PF18073 Rubredoxin metal binding domain ILQ33_23585 PF18429 Domain of unknown function (DUF5609) ILQ33_23595 PF10437 Bacterial lipoate protein ligase C-terminus ILQ33_23595 PF03099 Biotin/lipoate A/B protein ligase family ILQ33_23605 PF01048 Phosphorylase superfamily ILQ33_23610 PF01676 Metalloenzyme superfamily ILQ33_23615 PF02885 Glycosyl transferase family, helical bundle domain ILQ33_23615 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ILQ33_23615 PF00591 Glycosyl transferase family, a/b domain ILQ33_23620 PF01791 DeoC/LacD family aldolase ILQ33_23630 PF04055 Radical SAM superfamily ILQ33_23635 PF01026 TatD related DNase ILQ33_23640 PF01734 Patatin-like phospholipase ILQ33_23645 PF07043 Protein of unknown function (DUF1328) ILQ33_23650 PF04972 BON domain ILQ33_23655 PF03144 Elongation factor Tu domain 2 ILQ33_23655 PF16658 Class II release factor RF3, C-terminal domain ILQ33_23655 PF00009 Elongation factor Tu GTP binding domain ILQ33_23660 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_23665 PF00583 Acetyltransferase (GNAT) family ILQ33_23670 PF03603 DNA polymerase III psi subunit ILQ33_23675 PF05175 Methyltransferase small domain ILQ33_23675 PF08468 Methyltransferase small domain N-terminal ILQ33_23685 PF07256 Protein of unknown function (DUF1435) ILQ33_23690 PF11575 FhuF 2Fe-2S C-terminal domain ILQ33_23690 PF06276 Ferric iron reductase FhuF-like transporter ILQ33_23695 PF00196 Bacterial regulatory proteins, luxR family ILQ33_23700 PF00196 Bacterial regulatory proteins, luxR family ILQ33_23705 PF06738 Putative threonine/serine exporter ILQ33_23710 PF12821 Threonine/Serine exporter, ThrE ILQ33_23715 PF17948 DnaT DNA-binding domain ILQ33_23720 PF01695 IstB-like ATP binding protein ILQ33_23725 PF10696 Protein of unknown function (DUF2501) ILQ33_23730 PF00884 Sulfatase ILQ33_23735 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_23735 PF00107 Zinc-binding dehydrogenase ILQ33_23740 PF07729 FCD domain ILQ33_23740 PF00392 Bacterial regulatory proteins, gntR family ILQ33_23745 PF07690 Major Facilitator Superfamily ILQ33_23750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ33_23750 PF02203 Tar ligand binding domain homologue ILQ33_23750 PF00672 HAMP domain ILQ33_23760 PF13722 5TM C-terminal transporter carbon starvation CstA ILQ33_23760 PF02554 Carbon starvation protein CstA ILQ33_23765 PF04328 Selenoprotein, putative ILQ33_23770 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ33_23770 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILQ33_23785 PF04851 Type III restriction enzyme, res subunit ILQ33_23785 PF00271 Helicase conserved C-terminal domain ILQ33_23785 PF08463 EcoEI R protein C-terminal ILQ33_23785 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ILQ33_23790 PF02384 N-6 DNA Methylase ILQ33_23790 PF12161 HsdM N-terminal domain ILQ33_23795 PF01420 Type I restriction modification DNA specificity domain ILQ33_23800 PF08845 Toxin SymE, type I toxin-antitoxin system ILQ33_23815 PF06568 Domain of unknown function (DUF1127) ILQ33_23820 PF00392 Bacterial regulatory proteins, gntR family ILQ33_23820 PF00155 Aminotransferase class I and II ILQ33_23825 PF04754 Putative transposase, YhgA-like ILQ33_23835 PF07690 Major Facilitator Superfamily ILQ33_23840 PF04286 Protein of unknown function (DUF445) ILQ33_23845 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component ILQ33_23850 PF01869 BadF/BadG/BcrA/BcrD ATPase family ILQ33_23855 PF11823 Protein of unknown function (DUF3343) ILQ33_23865 PF06977 SdiA-regulated ILQ33_23870 PF06779 Uncharacterised MFS-type transporter YbfB ILQ33_23885 PF07670 Nucleoside recognition ILQ33_23890 PF07670 Nucleoside recognition ILQ33_23895 PF01979 Amidohydrolase family ILQ33_23905 PF04965 Gene 25-like lysozyme ILQ33_23915 PF10887 Protein of unknown function (DUF2686) ILQ33_23920 PF07729 FCD domain ILQ33_23920 PF00392 Bacterial regulatory proteins, gntR family ILQ33_23925 PF08125 Mannitol dehydrogenase C-terminal domain ILQ33_23925 PF01232 Mannitol dehydrogenase Rossmann domain ILQ33_23930 PF03786 D-mannonate dehydratase (UxuA) ILQ33_23935 PF02447 GntP family permease ILQ33_23940 PF00419 Fimbrial protein ILQ33_23940 PF09160 FimH, mannose binding ILQ33_23950 PF00419 Fimbrial protein ILQ33_23965 PF05717 IS66 Orf2 like protein ILQ33_23970 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_23970 PF03050 Transposase IS66 family ILQ33_23970 PF13817 IS66 C-terminal element ILQ33_23970 PF13007 Transposase C of IS166 homeodomain ILQ33_23975 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ33_23975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ33_23980 PF00419 Fimbrial protein ILQ33_23985 PF00419 Fimbrial protein ILQ33_23990 PF00589 Phage integrase family ILQ33_23995 PF00589 Phage integrase family ILQ33_24000 PF06178 Oligogalacturonate-specific porin protein (KdgM) ILQ33_24010 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ33_24020 PF00580 UvrD/REP helicase N-terminal domain ILQ33_24020 PF13361 UvrD-like helicase C-terminal domain ILQ33_24025 PF00270 DEAD/DEAH box helicase ILQ33_24025 PF09369 Domain of unknown function (DUF1998) ILQ33_24025 PF00271 Helicase conserved C-terminal domain ILQ33_24035 PF18339 RapA N-terminal Tudor like domain 1 ILQ33_24035 PF00271 Helicase conserved C-terminal domain ILQ33_24035 PF00176 SNF2 family N-terminal domain ILQ33_24035 PF12137 RNA polymerase recycling family C-terminal ILQ33_24035 PF18337 RapA N-terminal Tudor like domain ILQ33_24085 PF01381 Helix-turn-helix ILQ33_24100 PF02796 Helix-turn-helix domain of resolvase ILQ33_24100 PF00239 Resolvase, N terminal domain ILQ33_24130 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_24130 PF00107 Zinc-binding dehydrogenase ILQ33_24135 PF05872 Bacterial protein of unknown function (DUF853) ILQ33_24140 PF03739 Lipopolysaccharide export system permease LptF/LptG ILQ33_24145 PF03739 Lipopolysaccharide export system permease LptF/LptG ILQ33_24150 PF00883 Cytosol aminopeptidase family, catalytic domain ILQ33_24150 PF02789 Cytosol aminopeptidase family, N-terminal domain ILQ33_24155 PF04364 DNA polymerase III chi subunit, HolC ILQ33_24160 PF00133 tRNA synthetases class I (I, L, M and V) ILQ33_24160 PF10458 Valyl tRNA synthetase tRNA binding arm ILQ33_24160 PF08264 Anticodon-binding domain of tRNA ILQ33_24165 PF05987 Bacterial protein of unknown function (DUF898) ILQ33_24170 PF00583 Acetyltransferase (GNAT) family ILQ33_24175 PF06877 Regulator of ribonuclease activity B ILQ33_24180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILQ33_24180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILQ33_24190 PF04074 YhcH/YjgK/YiaL ILQ33_24195 PF00440 Bacterial regulatory proteins, tetR family ILQ33_24205 PF01042 Endoribonuclease L-PSP ILQ33_24210 PF08052 PyrBI operon leader peptide ILQ33_24215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILQ33_24215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILQ33_24220 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ILQ33_24220 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ILQ33_24225 PF01042 Endoribonuclease L-PSP ILQ33_24230 PF00690 Cation transporter/ATPase, N-terminus ILQ33_24230 PF00689 Cation transporting ATPase, C-terminus ILQ33_24235 PF17059 MgtA leader peptide ILQ33_24240 PF00356 Bacterial regulatory proteins, lacI family ILQ33_24245 PF00367 phosphotransferase system, EIIB ILQ33_24245 PF02378 Phosphotransferase system, EIIC ILQ33_24250 PF11941 Domain of unknown function (DUF3459) ILQ33_24250 PF00128 Alpha amylase, catalytic domain ILQ33_24255 PF03477 ATP cone domain ILQ33_24255 PF13597 Anaerobic ribonucleoside-triphosphate reductase ILQ33_24265 PF07361 Cytochrome b562 ILQ33_24270 PF01523 Putative modulator of DNA gyrase ILQ33_24275 PF04751 Protein of unknown function (DUF615) ILQ33_24280 PF02875 Mur ligase family, glutamate ligase domain ILQ33_24280 PF08245 Mur ligase middle domain ILQ33_24280 PF01225 Mur ligase family, catalytic domain ILQ33_24285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ILQ33_24290 PF02653 Branched-chain amino acid transport system / permease component ILQ33_24295 PF02653 Branched-chain amino acid transport system / permease component ILQ33_24300 PF00005 ABC transporter ILQ33_24305 PF13407 Periplasmic binding protein domain ILQ33_24310 PF00719 Inorganic pyrophosphatase ILQ33_24315 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ILQ33_24320 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ILQ33_24325 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ILQ33_24330 PF04357 TamB, inner membrane protein subunit of TAM complex ILQ33_24335 PF17243 POTRA domain TamA domain 1 ILQ33_24335 PF01103 Surface antigen ILQ33_24335 PF07244 Surface antigen variable number repeat ILQ33_24340 PF01625 Peptide methionine sulfoxide reductase ILQ33_24345 PF03471 Transporter associated domain ILQ33_24345 PF00571 CBS domain ILQ33_24345 PF01595 Cyclin M transmembrane N-terminal domain ILQ33_24350 PF06526 Protein of unknown function (DUF1107) ILQ33_24355 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ILQ33_24365 PF00459 Inositol monophosphatase family ILQ33_24370 PF00149 Calcineurin-like phosphoesterase ILQ33_24370 PF02872 5'-nucleotidase, C-terminal domain ILQ33_24375 PF01638 HxlR-like helix-turn-helix ILQ33_24380 PF05368 NmrA-like family ILQ33_24385 PF00892 EamA-like transporter family ILQ33_24390 PF01814 Hemerythrin HHE cation binding domain ILQ33_24390 PF04405 Domain of Unknown function (DUF542) ILQ33_24395 PF00324 Amino acid permease ILQ33_24400 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILQ33_24400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ33_24405 PF04225 Opacity-associated protein A LysM-like domain ILQ33_24405 PF08525 Opacity-associated protein A N-terminal motif ILQ33_24415 PF01385 Probable transposase ILQ33_24415 PF07282 Putative transposase DNA-binding domain ILQ33_24415 PF12323 Helix-turn-helix domain ILQ33_24420 PF01797 Transposase IS200 like ILQ33_24430 PF10887 Protein of unknown function (DUF2686) ILQ33_24435 PF03948 Ribosomal protein L9, C-terminal domain ILQ33_24435 PF01281 Ribosomal protein L9, N-terminal domain ILQ33_24440 PF01084 Ribosomal protein S18 ILQ33_24445 PF00436 Single-strand binding protein family ILQ33_24450 PF01250 Ribosomal protein S6 ILQ33_24455 PF07338 Protein of unknown function (DUF1471) ILQ33_24460 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ33_24465 PF01261 Xylose isomerase-like TIM barrel ILQ33_24470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ILQ33_24475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_24480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_24485 PF03611 PTS system sugar-specific permease component ILQ33_24495 PF00455 DeoR C terminal sensor domain ILQ33_24495 PF08220 DeoR-like helix-turn-helix domain ILQ33_24500 PF00326 Prolyl oligopeptidase family ILQ33_24505 PF07338 Protein of unknown function (DUF1471) ILQ33_24510 PF07338 Protein of unknown function (DUF1471) ILQ33_24515 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ33_24515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ33_24515 PF18158 Adaptive response protein AidB N-terminal domain ILQ33_24520 PF03738 Glutathionylspermidine synthase preATP-grasp ILQ33_24525 PF06693 Protein of unknown function (DUF1190) ILQ33_24530 PF03994 Domain of Unknown Function (DUF350) ILQ33_24535 PF10679 Protein of unknown function (DUF2491) ILQ33_24540 PF04012 PspA/IM30 family ILQ33_24545 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) ILQ33_24550 PF00588 SpoU rRNA Methylase family ILQ33_24550 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILQ33_24555 PF08461 Ribonuclease R winged-helix domain ILQ33_24555 PF17876 Cold shock domain ILQ33_24555 PF08206 Ribonuclease B OB domain ILQ33_24555 PF00773 RNB domain ILQ33_24555 PF00575 S1 RNA binding domain ILQ33_24560 PF02082 Transcriptional regulator ILQ33_24565 PF00709 Adenylosuccinate synthetase ILQ33_24570 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ILQ33_24575 PF01145 SPFH domain / Band 7 family ILQ33_24580 PF01145 SPFH domain / Band 7 family ILQ33_24580 PF12221 Bacterial membrane protein N terminal ILQ33_24585 PF13167 GTP-binding GTPase N-terminal ILQ33_24585 PF01926 50S ribosome-binding GTPase ILQ33_24585 PF16360 GTP-binding GTPase Middle Region ILQ33_24590 PF17209 Hfq protein ILQ33_24600 PF08676 MutL C terminal dimerisation domain ILQ33_24600 PF01119 DNA mismatch repair protein, C-terminal domain ILQ33_24605 PF01520 N-acetylmuramoyl-L-alanine amidase ILQ33_24610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ILQ33_24615 PF01256 Carbohydrate kinase ILQ33_24615 PF03853 YjeF-related protein N-terminus ILQ33_24620 PF08331 Domain of unknown function (DUF1730) ILQ33_24645 PF00929 Exonuclease ILQ33_24650 PF03193 RsgA GTPase ILQ33_24655 PF02666 Phosphatidylserine decarboxylase ILQ33_24660 PF12794 Mechanosensitive ion channel inner membrane domain 1 ILQ33_24660 PF12795 Mechanosensitive ion channel porin domain ILQ33_24660 PF00924 Mechanosensitive ion channel ILQ33_24665 PF13520 Amino acid permease ILQ33_24670 PF00152 tRNA synthetases class II (D, K and N) ILQ33_24675 PF02910 Fumarate reductase flavoprotein C-term ILQ33_24675 PF00890 FAD binding domain ILQ33_24680 PF13085 2Fe-2S iron-sulfur cluster binding domain ILQ33_24680 PF13183 4Fe-4S dicluster domain ILQ33_24685 PF02300 Fumarate reductase subunit C ILQ33_24690 PF02313 Fumarate reductase subunit D ILQ33_24695 PF00144 Beta-lactamase ILQ33_24700 PF08212 Lipocalin-like domain ILQ33_24705 PF00893 Small Multidrug Resistance protein ILQ33_24710 PF08085 Entericidin EcnA/B family ILQ33_24715 PF08085 Entericidin EcnA/B family ILQ33_24720 PF01132 Elongation factor P (EF-P) OB domain ILQ33_24720 PF09285 Elongation factor P, C-terminal ILQ33_24720 PF08207 Elongation factor P (EF-P) KOW-like domain ILQ33_24725 PF04055 Radical SAM superfamily ILQ33_24730 PF15922 YjeJ-like ILQ33_24735 PF13698 Domain of unknown function (DUF4156) ILQ33_24740 PF00118 TCP-1/cpn60 chaperonin family ILQ33_24745 PF00166 Chaperonin 10 Kd subunit ILQ33_24750 PF13520 Amino acid permease ILQ33_24755 PF04186 FxsA cytoplasmic membrane protein ILQ33_24760 PF00206 Lyase ILQ33_24760 PF10415 Fumarase C C-terminus ILQ33_24765 PF03605 Anaerobic c4-dicarboxylate membrane transporter ILQ33_24770 PF03091 CutA1 divalent ion tolerance protein ILQ33_24775 PF11412 Disulphide bond corrector protein DsbC ILQ33_24775 PF02683 Cytochrome C biogenesis protein transmembrane region ILQ33_24790 PF18500 CadC C-terminal domain 1 ILQ33_24790 PF00486 Transcriptional regulatory protein, C terminal ILQ33_24795 PF13520 Amino acid permease ILQ33_24800 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ33_24800 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ33_24800 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ33_24805 PF00854 POT family ILQ33_24810 PF01336 OB-fold nucleic acid binding domain ILQ33_24810 PF00152 tRNA synthetases class II (D, K and N) ILQ33_24815 PF10753 Toxin GhoT_OrtT ILQ33_24820 PF11080 Endoribonuclease GhoS ILQ33_24825 PF14542 GCN5-related N-acetyl-transferase ILQ33_24830 PF06902 Divergent 4Fe-4S mono-cluster ILQ33_24835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ILQ33_24835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_24835 PF17203 Single cache domain 3 ILQ33_24835 PF00989 PAS fold ILQ33_24840 PF00072 Response regulator receiver domain ILQ33_24845 PF03605 Anaerobic c4-dicarboxylate membrane transporter ILQ33_24850 PF05681 Fumarate hydratase (Fumerase) ILQ33_24850 PF05683 Fumarase C-terminus ILQ33_24855 PF09997 Predicted membrane protein (DUF2238) ILQ33_24865 PF11975 Family 4 glycosyl hydrolase C-terminal domain ILQ33_24865 PF02056 Family 4 glycosyl hydrolase ILQ33_24870 PF12833 Helix-turn-helix domain ILQ33_24875 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ33_24875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ33_24875 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ33_24880 PF12833 Helix-turn-helix domain ILQ33_24885 PF13520 Amino acid permease ILQ33_24890 PF08019 Phosphoethanolamine transferase EptA/EptB ILQ33_24890 PF00884 Sulfatase ILQ33_24895 PF00486 Transcriptional regulatory protein, C terminal ILQ33_24895 PF00072 Response regulator receiver domain ILQ33_24900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_24900 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_24910 PF00083 Sugar (and other) transporter ILQ33_24910 PF08946 Osmosensory transporter coiled coil ILQ33_24915 PF13990 YjcZ-like protein ILQ33_24920 PF00350 Dynamin family ILQ33_24925 PF08274 PhnA Zinc-Ribbon ILQ33_24925 PF03831 PhnA domain ILQ33_24930 PF06983 3-demethylubiquinone-9 3-methyltransferase ILQ33_24935 PF00005 ABC transporter ILQ33_24945 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_24950 PF07702 UTRA domain ILQ33_24950 PF00392 Bacterial regulatory proteins, gntR family ILQ33_24955 PF06754 Phosphonate metabolism protein PhnG ILQ33_24960 PF05845 Bacterial phosphonate metabolism protein (PhnH) ILQ33_24965 PF05861 Bacterial phosphonate metabolism protein (PhnI) ILQ33_24970 PF06007 Phosphonate metabolism protein PhnJ ILQ33_24975 PF00005 ABC transporter ILQ33_24980 PF00005 ABC transporter ILQ33_24985 PF07969 Amidohydrolase family ILQ33_24995 PF00583 Acetyltransferase (GNAT) family ILQ33_25000 PF12706 Beta-lactamase superfamily domain ILQ33_25010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_25010 PF00072 Response regulator receiver domain ILQ33_25010 PF08448 PAS fold ILQ33_25010 PF13188 PAS domain ILQ33_25010 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_25015 PF00005 ABC transporter ILQ33_25020 PF02653 Branched-chain amino acid transport system / permease component ILQ33_25025 PF13407 Periplasmic binding protein domain ILQ33_25035 PF01116 Fructose-bisphosphate aldolase class-II ILQ33_25040 PF00294 pfkB family carbohydrate kinase ILQ33_25045 PF00072 Response regulator receiver domain ILQ33_25045 PF00486 Transcriptional regulatory protein, C terminal ILQ33_25050 PF14864 Alkyl sulfatase C-terminal ILQ33_25050 PF14863 Alkyl sulfatase dimerisation ILQ33_25050 PF00753 Metallo-beta-lactamase superfamily ILQ33_25055 PF17090 Uncharacterised protein family ILQ33_25060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ33_25060 PF00529 HlyD membrane-fusion protein of T1SS ILQ33_25065 PF04632 Fusaric acid resistance protein family ILQ33_25070 PF02321 Outer membrane efflux protein ILQ33_25080 PF08238 Sel1 repeat ILQ33_25085 PF00375 Sodium:dicarboxylate symporter family ILQ33_25095 PF03918 Cytochrome C biogenesis protein ILQ33_25100 PF01578 Cytochrome C assembly protein ILQ33_25100 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ILQ33_25105 PF03916 Polysulphide reductase, NrfD ILQ33_25110 PF13247 4Fe-4S dicluster domain ILQ33_25110 PF00037 4Fe-4S binding domain ILQ33_25115 PF13435 Cytochrome c554 and c-prime ILQ33_25115 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) ILQ33_25120 PF02335 Cytochrome c552 ILQ33_25125 PF16177 Acetyl-coenzyme A synthetase N-terminus ILQ33_25125 PF00501 AMP-binding enzyme ILQ33_25125 PF13193 AMP-binding enzyme C-terminal domain ILQ33_25130 PF04341 Protein of unknown function, DUF485 ILQ33_25135 PF00474 Sodium:solute symporter family ILQ33_25140 PF00805 Pentapeptide repeats (8 copies) ILQ33_25145 PF00999 Sodium/hydrogen exchanger family ILQ33_25150 PF00860 Permease family ILQ33_25155 PF09278 MerR, DNA binding ILQ33_25155 PF00376 MerR family regulatory protein ILQ33_25160 PF12833 Helix-turn-helix domain ILQ33_25165 PF00563 EAL domain ILQ33_25165 PF12792 CSS motif domain associated with EAL ILQ33_25170 PF15940 Family of unknown function ILQ33_25175 PF00436 Single-strand binding protein family ILQ33_25180 PF17760 UvrA interaction domain ILQ33_25180 PF17755 UvrA DNA-binding domain ILQ33_25180 PF00005 ABC transporter ILQ33_25185 PF04237 YjbR ILQ33_25190 PF01894 Uncharacterised protein family UPF0047 ILQ33_25195 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ILQ33_25205 PF00155 Aminotransferase class I and II ILQ33_25210 PF01168 Alanine racemase, N-terminal domain ILQ33_25210 PF00842 Alanine racemase, C-terminal domain ILQ33_25215 PF00772 DnaB-like helicase N terminal domain ILQ33_25215 PF03796 DnaB-like helicase C terminal domain ILQ33_25220 PF00107 Zinc-binding dehydrogenase ILQ33_25220 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_25225 PF09583 Phage shock protein G (Phageshock_PspG) ILQ33_25230 PF01207 Dihydrouridine synthase (Dus) ILQ33_25240 PF06183 DinI-like family ILQ33_25270 PF07484 Phage Tail Collar Domain ILQ33_25270 PF08400 Prophage tail fibre N-terminal ILQ33_25270 PF03335 Phage tail fibre repeat ILQ33_25275 PF06316 Enterobacterial Ail/Lom protein ILQ33_25330 PF01207 Dihydrouridine synthase (Dus) ILQ33_25335 PF10897 Protein of unknown function (DUF2713) ILQ33_25340 PF01475 Ferric uptake regulator family ILQ33_25345 PF05532 CsbD-like ILQ33_25350 PF01554 MatE ILQ33_25355 PF00717 Peptidase S24-like ILQ33_25355 PF01726 LexA DNA binding domain ILQ33_25360 PF01219 Prokaryotic diacylglycerol kinase ILQ33_25365 PF01553 Acyltransferase ILQ33_25370 PF01040 UbiA prenyltransferase family ILQ33_25375 PF04345 Chorismate lyase ILQ33_25380 PF13981 SopA-like central domain ILQ33_25380 PF13599 Pentapeptide repeats (9 copies) ILQ33_25385 PF07148 Maltose operon periplasmic protein precursor (MalM) ILQ33_25390 PF02264 LamB porin ILQ33_25395 PF00005 ABC transporter ILQ33_25395 PF17912 MalK OB fold domain ILQ33_25400 PF01547 Bacterial extracellular solute-binding protein ILQ33_25405 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_25405 PF14785 Maltose transport system permease protein MalF P2 domain ILQ33_25410 PF00528 Binding-protein-dependent transport system inner membrane component ILQ33_25415 PF00083 Sugar (and other) transporter ILQ33_25420 PF06146 Phosphate-starvation-inducible E ILQ33_25430 PF17089 Uncharacterised protein family ILQ33_25435 PF06082 Exopolysaccharide biosynthesis protein YbjH ILQ33_25440 PF06251 Capsule biosynthesis GfcC ILQ33_25445 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF ILQ33_25450 PF11106 Exopolysaccharide production protein YjbE ILQ33_25455 PF00342 Phosphoglucose isomerase ILQ33_25460 PF01842 ACT domain ILQ33_25460 PF00696 Amino acid kinase family ILQ33_25465 PF11656 YjbD family (DUF3811) ILQ33_25470 PF01479 S4 domain ILQ33_25470 PF00849 RNA pseudouridylate synthase ILQ33_25475 PF13936 Helix-turn-helix domain ILQ33_25475 PF04198 Putative sugar-binding domain ILQ33_25480 PF00106 short chain dehydrogenase ILQ33_25485 PF03610 PTS system fructose IIA component ILQ33_25490 PF03830 PTS system sorbose subfamily IIB component ILQ33_25495 PF03609 PTS system sorbose-specific iic component ILQ33_25500 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ33_25505 PF00107 Zinc-binding dehydrogenase ILQ33_25505 PF08240 Alcohol dehydrogenase GroES-like domain ILQ33_25510 PF03575 Peptidase family S51 ILQ33_25515 PF02690 Na+/Pi-cotransporter ILQ33_25520 PF02965 Vitamin B12 dependent methionine synthase, activation domain ILQ33_25520 PF02574 Homocysteine S-methyltransferase ILQ33_25520 PF00809 Pterin binding enzyme ILQ33_25520 PF02310 B12 binding domain ILQ33_25520 PF02607 B12 binding domain ILQ33_25525 PF09339 IclR helix-turn-helix domain ILQ33_25525 PF01614 Bacterial transcriptional regulator ILQ33_25530 PF07906 ShET2 enterotoxin, N-terminal region ILQ33_25535 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ILQ33_25540 PF00463 Isocitrate lyase family ILQ33_25545 PF01274 Malate synthase ILQ33_25550 PF04204 Homoserine O-succinyltransferase ILQ33_25555 PF13673 Acetyltransferase (GNAT) domain ILQ33_25580 PF01808 AICARFT/IMPCHase bienzyme ILQ33_25580 PF02142 MGS-like domain ILQ33_25585 PF02843 Phosphoribosylglycinamide synthetase, C domain ILQ33_25585 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ILQ33_25585 PF02844 Phosphoribosylglycinamide synthetase, N domain ILQ33_25590 PF00072 Response regulator receiver domain ILQ33_25590 PF00158 Sigma-54 interaction domain ILQ33_25590 PF02954 Bacterial regulatory protein, Fis family ILQ33_25595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_25595 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_25600 PF13801 Heavy-metal resistance ILQ33_25605 PF07356 Protein of unknown function (DUF1481) ILQ33_25610 PF00216 Bacterial DNA-binding protein ILQ33_25615 PF04222 Protein of unknown function (DUF416) ILQ33_25620 PF04493 Endonuclease V ILQ33_25625 PF01208 Uroporphyrinogen decarboxylase (URO-D) ILQ33_25630 PF09297 NADH pyrophosphatase zinc ribbon domain ILQ33_25630 PF00293 NUDIX domain ILQ33_25635 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ILQ33_25640 PF01964 Radical SAM ThiC family ILQ33_25640 PF13667 ThiC-associated domain ILQ33_25645 PF02581 Thiamine monophosphate synthase ILQ33_25650 PF00899 ThiF family ILQ33_25655 PF02597 ThiS family ILQ33_25660 PF05690 Thiazole biosynthesis protein ThiG ILQ33_25665 PF06968 Biotin and Thiamin Synthesis associated domain ILQ33_25665 PF04055 Radical SAM superfamily ILQ33_25675 PF05000 RNA polymerase Rpb1, domain 4 ILQ33_25675 PF00623 RNA polymerase Rpb1, domain 2 ILQ33_25675 PF04998 RNA polymerase Rpb1, domain 5 ILQ33_25675 PF04983 RNA polymerase Rpb1, domain 3 ILQ33_25675 PF04997 RNA polymerase Rpb1, domain 1 ILQ33_25680 PF04563 RNA polymerase beta subunit ILQ33_25680 PF04561 RNA polymerase Rpb2, domain 2 ILQ33_25680 PF10385 RNA polymerase beta subunit external 1 domain ILQ33_25680 PF00562 RNA polymerase Rpb2, domain 6 ILQ33_25680 PF04560 RNA polymerase Rpb2, domain 7 ILQ33_25680 PF04565 RNA polymerase Rpb2, domain 3 ILQ33_25685 PF16320 Ribosomal protein L7/L12 dimerisation domain ILQ33_25685 PF00542 Ribosomal protein L7/L12 C-terminal domain ILQ33_25690 PF00466 Ribosomal protein L10 ILQ33_25695 PF00687 Ribosomal protein L1p/L10e family ILQ33_25700 PF03946 Ribosomal protein L11, N-terminal domain ILQ33_25700 PF00298 Ribosomal protein L11, RNA binding domain ILQ33_25705 PF00467 KOW motif ILQ33_25705 PF02357 Transcription termination factor nusG ILQ33_25710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ILQ33_25715 PF03144 Elongation factor Tu domain 2 ILQ33_25715 PF00009 Elongation factor Tu GTP binding domain ILQ33_25715 PF03143 Elongation factor Tu C-terminal domain ILQ33_25740 PF00485 Phosphoribulokinase / Uridine kinase family ILQ33_25745 PF03099 Biotin/lipoate A/B protein ligase family ILQ33_25745 PF02237 Biotin protein ligase C terminal domain ILQ33_25745 PF08279 HTH domain ILQ33_25750 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ILQ33_25750 PF01565 FAD binding domain ILQ33_25775 PF01177 Asp/Glu/Hydantoin racemase ILQ33_25780 PF07715 TonB-dependent Receptor Plug Domain ILQ33_25780 PF00593 TonB dependent receptor ILQ33_25785 PF05958 tRNA (Uracil-5-)-methyltransferase ILQ33_25790 PF07226 Protein of unknown function (DUF1422) ILQ33_25795 PF00440 Bacterial regulatory proteins, tetR family ILQ33_25800 PF07690 Major Facilitator Superfamily ILQ33_25805 PF07687 Peptidase dimerisation domain ILQ33_25805 PF01546 Peptidase family M20/M25/M40 ILQ33_25810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ33_25810 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ33_25815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_25815 PF03466 LysR substrate binding domain ILQ33_25820 PF00206 Lyase ILQ33_25820 PF14698 Argininosuccinate lyase C-terminal ILQ33_25825 PF00696 Amino acid kinase family ILQ33_25830 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILQ33_25830 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ33_25835 PF01546 Peptidase family M20/M25/M40 ILQ33_25835 PF07687 Peptidase dimerisation domain ILQ33_25840 PF00311 Phosphoenolpyruvate carboxylase ILQ33_25845 PF00884 Sulfatase ILQ33_25850 PF12833 Helix-turn-helix domain ILQ33_25855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_25860 PF04055 Radical SAM superfamily ILQ33_25865 PF01228 Glycine radical ILQ33_25865 PF02901 Pyruvate formate lyase-like ILQ33_25870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_25880 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ33_25880 PF00391 PEP-utilising enzyme, mobile domain ILQ33_25880 PF05524 PEP-utilising enzyme, N-terminal ILQ33_25880 PF00381 PTS HPr component phosphorylation site ILQ33_25880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_25885 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ33_25890 PF00465 Iron-containing alcohol dehydrogenase ILQ33_25895 PF06940 Domain of unknown function (DUF1287) ILQ33_25900 PF00892 EamA-like transporter family ILQ33_25905 PF00141 Peroxidase ILQ33_25910 PF02219 Methylenetetrahydrofolate reductase ILQ33_25915 PF03447 Homoserine dehydrogenase, NAD binding domain ILQ33_25915 PF00696 Amino acid kinase family ILQ33_25915 PF00742 Homoserine dehydrogenase ILQ33_25920 PF01053 Cys/Met metabolism PLP-dependent enzyme ILQ33_25925 PF01340 Met Apo-repressor, MetJ ILQ33_25930 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ILQ33_25945 PF03527 RHS protein ILQ33_25945 PF05593 RHS Repeat ILQ33_25945 PF14220 Domain of unknown function (DUF4329) ILQ33_25950 PF01197 Ribosomal protein L31 ILQ33_25955 PF17764 3′ DNA-binding domain (3′BD) ILQ33_25955 PF00271 Helicase conserved C-terminal domain ILQ33_25955 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ILQ33_25955 PF00270 DEAD/DEAH box helicase ILQ33_25955 PF18074 Primosomal protein N C-terminal domain ILQ33_25960 PF00356 Bacterial regulatory proteins, lacI family ILQ33_25965 PF05036 Sporulation related domain ILQ33_25970 PF00227 Proteasome subunit ILQ33_25975 PF07724 AAA domain (Cdc48 subfamily) ILQ33_25975 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ33_25975 PF00004 ATPase family associated with various cellular activities (AAA) ILQ33_25980 PF01040 UbiA prenyltransferase family ILQ33_25985 PF03737 Aldolase/RraA ILQ33_26000 PF06005 Cell division protein ZapB ILQ33_26005 PF00230 Major intrinsic protein ILQ33_26010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ33_26010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ33_26015 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ILQ33_26020 PF00175 Oxidoreductase NAD-binding domain ILQ33_26020 PF00970 Oxidoreductase FAD-binding domain ILQ33_26025 PF00582 Universal stress protein family ILQ33_26030 PF04175 Protein of unknown function (DUF406) ILQ33_26035 PF05656 Protein of unknown function (DUF805) ILQ33_26040 PF07305 Protein of unknown function (DUF1454) ILQ33_26045 PF00121 Triosephosphate isomerase ILQ33_26050 PF02611 CDP-diacylglycerol pyrophosphatase ILQ33_26060 PF00365 Phosphofructokinase ILQ33_26065 PF01545 Cation efflux family ILQ33_26065 PF16916 Dimerisation domain of Zinc Transporter ILQ33_26070 PF07813 LTXXQ motif family protein ILQ33_26075 PF00486 Transcriptional regulatory protein, C terminal ILQ33_26075 PF00072 Response regulator receiver domain ILQ33_26080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_26080 PF00672 HAMP domain ILQ33_26080 PF16527 Two-component sensor protein CpxA, periplasmic domain ILQ33_26080 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_26085 PF03473 MOSC domain ILQ33_26085 PF03475 3-alpha domain ILQ33_26090 PF03812 2-keto-3-deoxygluconate permease ILQ33_26095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ILQ33_26095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ILQ33_26105 PF12833 Helix-turn-helix domain ILQ33_26105 PF02311 AraC-like ligand binding domain ILQ33_26110 PF12833 Helix-turn-helix domain ILQ33_26110 PF02311 AraC-like ligand binding domain ILQ33_26115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ33_26115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ33_26120 PF06134 L-rhamnose isomerase (RhaA) ILQ33_26125 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ33_26130 PF05336 L-rhamnose mutarotase ILQ33_26140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_26145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ33_26145 PF02378 Phosphotransferase system, EIIC ILQ33_26150 PF05343 M42 glutamyl aminopeptidase ILQ33_26155 PF08279 HTH domain ILQ33_26155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ33_26160 PF12889 Protein of unknown function (DUF3829) ILQ33_26165 PF02634 FdhD/NarQ family ILQ33_26175 PF09163 Formate dehydrogenase N, transmembrane ILQ33_26175 PF13247 4Fe-4S dicluster domain ILQ33_26180 PF01292 Prokaryotic cytochrome b561 ILQ33_26185 PF04216 Protein involved in formate dehydrogenase formation ILQ33_26195 PF01402 Ribbon-helix-helix protein, copG family ILQ33_26210 PF00583 Acetyltransferase (GNAT) family ILQ33_26210 PF09500 Putative thioesterase (yiiD_Cterm) ILQ33_26215 PF02580 D-Tyr-tRNA(Tyr) deacylase ILQ33_26220 PF03631 Virulence factor BrkB ILQ33_26225 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_26230 PF00455 DeoR C terminal sensor domain ILQ33_26230 PF08220 DeoR-like helix-turn-helix domain ILQ33_26235 PF00294 pfkB family carbohydrate kinase ILQ33_26240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILQ33_26240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ33_26245 PF01791 DeoC/LacD family aldolase ILQ33_26255 PF01263 Aldose 1-epimerase ILQ33_26265 PF01055 Glycosyl hydrolases family 31 ILQ33_26280 PF06178 Oligogalacturonate-specific porin protein (KdgM) ILQ33_26285 PF07690 Major Facilitator Superfamily ILQ33_26290 PF01261 Xylose isomerase-like TIM barrel ILQ33_26295 PF07702 UTRA domain ILQ33_26295 PF00392 Bacterial regulatory proteins, gntR family ILQ33_26300 PF03144 Elongation factor Tu domain 2 ILQ33_26300 PF00009 Elongation factor Tu GTP binding domain ILQ33_26300 PF00679 Elongation factor G C-terminus ILQ33_26305 PF03951 Glutamine synthetase, beta-Grasp domain ILQ33_26305 PF00120 Glutamine synthetase, catalytic domain ILQ33_26310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ33_26310 PF00989 PAS fold ILQ33_26310 PF00512 His Kinase A (phospho-acceptor) domain ILQ33_26315 PF00158 Sigma-54 interaction domain ILQ33_26315 PF00072 Response regulator receiver domain ILQ33_26315 PF02954 Bacterial regulatory protein, Fis family ILQ33_26325 PF06969 HemN C-terminal domain ILQ33_26325 PF04055 Radical SAM superfamily ILQ33_26330 PF04220 Der GTPase activator (YihI) ILQ33_26335 PF01926 50S ribosome-binding GTPase ILQ33_26340 PF01367 5'-3' exonuclease, C-terminal SAM fold ILQ33_26340 PF01612 3'-5' exonuclease ILQ33_26340 PF00476 DNA polymerase family A ILQ33_26340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ILQ33_26350 PF06097 Bacterial protein of unknown function (DUF945) ILQ33_26355 PF01323 DSBA-like thioredoxin domain ILQ33_26360 PF01636 Phosphotransferase enzyme family ILQ33_26365 PF06288 Protein of unknown function (DUF1040) ILQ33_26370 PF12804 MobA-like NTP transferase domain ILQ33_26375 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ILQ33_26405 PF12724 Flavodoxin domain ILQ33_26410 PF02386 Cation transport protein ILQ33_26415 PF09186 Domain of unknown function (DUF1949) ILQ33_26415 PF01205 Uncharacterized protein family UPF0029 ILQ33_26420 PF00557 Metallopeptidase family M24 ILQ33_26425 PF00378 Enoyl-CoA hydratase/isomerase ILQ33_26425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILQ33_26425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILQ33_26430 PF02803 Thiolase, C-terminal domain ILQ33_26430 PF00108 Thiolase, N-terminal domain ILQ33_26435 PF00970 Oxidoreductase FAD-binding domain ILQ33_26435 PF00175 Oxidoreductase NAD-binding domain ILQ33_26440 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ILQ33_26445 PF02357 Transcription termination factor nusG ILQ33_26450 PF01026 TatD related DNase ILQ33_26455 PF00902 Sec-independent protein translocase protein (TatC) ILQ33_26465 PF02416 mttA/Hcf106 family ILQ33_26470 PF03109 ABC1 family ILQ33_26475 PF02036 SCP-2 sterol transfer family ILQ33_26480 PF01209 ubiE/COQ5 methyltransferase family ILQ33_26485 PF02646 RmuC family ILQ33_26490 PF01048 Phosphorylase superfamily ILQ33_26495 PF01738 Dienelactone hydrolase family ILQ33_26500 PF01717 Cobalamin-independent synthase, Catalytic domain ILQ33_26500 PF08267 Cobalamin-independent synthase, N-terminal domain ILQ33_26505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_26505 PF03466 LysR substrate binding domain ILQ33_26510 PF00892 EamA-like transporter family ILQ33_26520 PF12146 Serine aminopeptidase, S33 ILQ33_26525 PF01810 LysE type translocator ILQ33_26530 PF01810 LysE type translocator ILQ33_26535 PF16124 RecQ zinc-binding ILQ33_26535 PF09382 RQC domain ILQ33_26535 PF00570 HRDC domain ILQ33_26535 PF00271 Helicase conserved C-terminal domain ILQ33_26535 PF00270 DEAD/DEAH box helicase ILQ33_26540 PF02253 Phospholipase A1 ILQ33_26545 PF03061 Thioesterase superfamily ILQ33_26550 PF00892 EamA-like transporter family ILQ33_26560 PF01544 CorA-like Mg2+ transporter protein ILQ33_26575 PF01544 CorA-like Mg2+ transporter protein ILQ33_26580 PF09992 Phosphodiester glycosidase ILQ33_26585 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase ILQ33_26590 PF13361 UvrD-like helicase C-terminal domain ILQ33_26590 PF00580 UvrD/REP helicase N-terminal domain ILQ33_26595 PF13419 Haloacid dehalogenase-like hydrolase ILQ33_26600 PF02899 Phage integrase, N-terminal SAM-like domain ILQ33_26600 PF00589 Phage integrase family ILQ33_26605 PF04340 Protein of unknown function, DUF484 ILQ33_26610 PF01678 Diaminopimelate epimerase ILQ33_26615 PF13627 Prokaryotic lipoprotein-attachment site ILQ33_26625 PF01491 Frataxin-like domain ILQ33_26630 PF12633 Adenylate cyclase NT domain ILQ33_26630 PF01295 Adenylate cyclase, class-I ILQ33_26635 PF03900 Porphobilinogen deaminase, C-terminal domain ILQ33_26635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ILQ33_26640 PF02602 Uroporphyrinogen-III synthase HemD ILQ33_26645 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ILQ33_26650 PF07719 Tetratricopeptide repeat ILQ33_26650 PF07219 HemY protein N-terminus ILQ33_26655 PF00884 Sulfatase ILQ33_26660 PF04055 Radical SAM superfamily ILQ33_26660 PF13186 Iron-sulfur cluster-binding domain ILQ33_26690 PF00324 Amino acid permease ILQ33_26695 PF03808 Glycosyl transferase WecB/TagA/CpsF family ILQ33_26700 PF06899 WzyE protein, O-antigen assembly polymerase ILQ33_26705 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ILQ33_26710 PF01943 Polysaccharide biosynthesis protein ILQ33_26715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILQ33_26725 PF00483 Nucleotidyl transferase ILQ33_26730 PF16363 GDP-mannose 4,6 dehydratase ILQ33_26735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILQ33_26735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILQ33_26735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILQ33_26740 PF02350 UDP-N-acetylglucosamine 2-epimerase ILQ33_26745 PF02706 Chain length determinant protein ILQ33_26750 PF00953 Glycosyl transferase family 4 ILQ33_26755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ33_26755 PF07497 Rho termination factor, RNA-binding domain ILQ33_26755 PF07498 Rho termination factor, N-terminal domain ILQ33_26765 PF00085 Thioredoxin ILQ33_26770 PF00270 DEAD/DEAH box helicase ILQ33_26770 PF00271 Helicase conserved C-terminal domain ILQ33_26775 PF02541 Ppx/GppA phosphatase family ILQ33_26780 PF00580 UvrD/REP helicase N-terminal domain ILQ33_26780 PF13361 UvrD-like helicase C-terminal domain ILQ33_26785 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ILQ33_26795 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ILQ33_26795 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ILQ33_26800 PF03466 LysR substrate binding domain ILQ33_26800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_26805 PF00585 C-terminal regulatory domain of Threonine dehydratase ILQ33_26805 PF00291 Pyridoxal-phosphate dependent enzyme ILQ33_26810 PF00920 Dehydratase family ILQ33_26815 PF01063 Amino-transferase class IV ILQ33_26825 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ33_26825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ33_26825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ33_26835 PF08046 IlvGEDA operon leader peptide ILQ33_26840 PF01078 Magnesium chelatase, subunit ChlI ILQ33_26840 PF13335 Magnesium chelatase, subunit ChlI C-terminal ILQ33_26845 PF04219 Protein of unknown function, DUF ILQ33_26850 PF03466 LysR substrate binding domain ILQ33_26850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ33_26885 PF00392 Bacterial regulatory proteins, gntR family ILQ33_26885 PF07729 FCD domain ILQ33_26890 PF07690 Major Facilitator Superfamily ILQ33_26895 PF00356 Bacterial regulatory proteins, lacI family ILQ33_26900 PF00294 pfkB family carbohydrate kinase ILQ33_26905 PF13407 Periplasmic binding protein domain ILQ33_26910 PF02653 Branched-chain amino acid transport system / permease component ILQ33_26915 PF00005 ABC transporter ILQ33_26920 PF05025 RbsD / FucU transport protein family ILQ33_26925 PF02705 K+ potassium transporter ILQ33_26930 PF17868 AAA lid domain ILQ33_26930 PF12592 Protein of unknown function (DUF3763) ILQ33_26930 PF07728 AAA domain (dynein-related subfamily) ILQ33_26935 PF05762 VWA domain containing CoxE-like protein ILQ33_26940 PF03590 Aspartate-ammonia ligase ILQ33_26945 PF01037 Lrp/AsnC ligand binding domain ILQ33_26950 PF00258 Flavodoxin ILQ33_26960 PF02387 IncFII RepA protein family ILQ33_27000 PF00141 Peroxidase ILQ33_27015 PF13018 Extended Signal Peptide of Type V secretion system ILQ33_27015 PF03797 Autotransporter beta-domain ILQ33_27015 PF02395 Immunoglobulin A1 protease ILQ33_27025 PF05717 IS66 Orf2 like protein ILQ33_27030 PF13817 IS66 C-terminal element ILQ33_27030 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_27030 PF13007 Transposase C of IS166 homeodomain ILQ33_27030 PF03050 Transposase IS66 family ILQ33_27040 PF01522 Polysaccharide deacetylase ILQ33_27045 PF13439 Glycosyltransferase Family 4 ILQ33_27045 PF00534 Glycosyl transferases group 1 ILQ33_27050 PF00884 Sulfatase ILQ33_27055 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ33_27075 PF05717 IS66 Orf2 like protein ILQ33_27080 PF13007 Transposase C of IS166 homeodomain ILQ33_27080 PF13817 IS66 C-terminal element ILQ33_27080 PF03050 Transposase IS66 family ILQ33_27080 PF13005 zinc-finger binding domain of transposase IS66 ILQ33_27085 PF12561 ToxR activated gene A lipoprotein domain ILQ33_27085 PF17945 Beta/Gamma crystallin ILQ33_27090 PF11356 Type II secretion system protein C ILQ33_27095 PF03958 Bacterial type II/III secretion system short domain ILQ33_27095 PF00263 Bacterial type II and III secretion system protein ILQ33_27100 PF00437 Type II/IV secretion system protein ILQ33_27105 PF00482 Type II secretion system (T2SS), protein F ILQ33_27110 PF07963 Prokaryotic N-terminal methylation motif ILQ33_27110 PF08334 Type II secretion system (T2SS), protein G ILQ33_27115 PF12019 Type II transport protein GspH ILQ33_27120 PF02501 Type II secretion system (T2SS), protein I ILQ33_27120 PF07963 Prokaryotic N-terminal methylation motif ILQ33_27125 PF11612 Type II secretion system (T2SS), protein J ILQ33_27125 PF07963 Prokaryotic N-terminal methylation motif ILQ33_27130 PF03934 Type II secretion system (T2SS), protein K ILQ33_27135 PF12693 GspL periplasmic domain ILQ33_27135 PF05134 Type II secretion system (T2SS), protein L ILQ33_27140 PF04612 Type II secretion system (T2SS), protein M ILQ33_27145 PF06750 Bacterial Peptidase A24 N-terminal domain ILQ33_27145 PF01478 Type IV leader peptidase family ILQ33_27150 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ILQ33_27160 PF02794 RTX toxin acyltransferase family ILQ33_27165 PF02382 N-terminal domain in RTX protein ILQ33_27165 PF08339 RTX C-terminal domain ILQ33_27165 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ILQ33_27170 PF00664 ABC transporter transmembrane region ILQ33_27170 PF03412 Peptidase C39 family ILQ33_27170 PF00005 ABC transporter ILQ33_27190 PF00589 Phage integrase family ILQ33_27195 PF01051 Initiator Replication protein ILQ33_27215 PF07362 Post-segregation antitoxin CcdA ILQ33_27220 PF01845 CcdB protein ILQ33_27225 PF00589 Phage integrase family ILQ33_27235 PF01051 Initiator Replication protein ILQ33_27240 PF13614 AAA domain ILQ33_27245 PF02195 ParB-like nuclease domain ILQ33_27245 PF18090 Centromere-binding protein HTH domain ILQ33_27250 PF06924 Protein of unknown function (DUF1281) ILQ33_27260 PF01555 DNA methylase ILQ33_27270 PF07128 Protein of unknown function (DUF1380) ILQ33_27280 PF03230 Antirestriction protein ILQ33_27285 PF07128 Protein of unknown function (DUF1380) ILQ33_27325 PF00436 Single-strand binding protein family ILQ33_27330 PF06006 Bacterial protein of unknown function (DUF905) ILQ33_27335 PF02195 ParB-like nuclease domain ILQ33_27340 PF06290 Plasmid SOS inhibition protein (PsiB) ILQ33_27345 PF06952 PsiA protein ILQ33_27350 PF01848 Hok/gef family ILQ33_27385 PF12920 TcdA/TcdB pore forming domain ILQ33_27385 PF12918 TcdB toxin N-terminal helical domain ILQ33_27385 PF11713 Peptidase C80 family ILQ33_27385 PF01473 Putative cell wall binding repeat ILQ33_27385 PF12919 TcdA/TcdB catalytic glycosyltransferase domain ILQ33_27410 PF05857 TraX protein ILQ33_27415 PF00561 alpha/beta hydrolase fold ILQ33_27420 PF12602 Fertility inhibition protein N terminal ILQ33_27420 PF04352 ProQ/FINO family ILQ33_27430 PF00565 Staphylococcal nuclease homologue ILQ33_27435 PF05321 Haemolysin expression modulating protein ILQ33_27445 PF10723 Replication regulatory protein RepB