locus-tag	class	description
ILQ33_00015	COG3312	ion transport
ILQ33_00065	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ILQ33_00090	COG3539	Fimbrial protein
ILQ33_00100	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ILQ33_00105	COG0573	inorganic phosphate transmembrane transporter activity
ILQ33_00110	COG0581	inorganic phosphate transmembrane transporter activity
ILQ33_00115	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ILQ33_00120	COG0704	Plays a role in the regulation of phosphate uptake
ILQ33_00145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ33_00150	COG2252	PERMEase
ILQ33_00155	COG0431	NADPH-dependent FMN reductase
ILQ33_00160	COG2091	lysine biosynthetic process via aminoadipic acid
ILQ33_00175	COG0814	amino acid
ILQ33_00230	COG0592	DNA-directed DNA polymerase activity
ILQ33_00240	COG0187	DNA topoisomerase II activity
ILQ33_00245	COG3753	Protein conserved in bacteria
ILQ33_00250	COG0561	phosphatase activity
ILQ33_00260	COG0644	oxidoreductase
ILQ33_00265	COG0823	Involved in the tonB-independent uptake of proteins
ILQ33_00270	COG5645	(Lipo)protein
ILQ33_00290	COG2188	Transcriptional regulator
ILQ33_00305	COG2207	Transcriptional regulator
ILQ33_00310	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ILQ33_00315	COG3119	arylsulfatase activity
ILQ33_00325	COG2149	membrane
ILQ33_00335	COG0641	radical SAM
ILQ33_00340	COG2814	Major facilitator Superfamily
ILQ33_00355	COG0028	Belongs to the TPP enzyme family
ILQ33_00360	COG0440	acetolactate synthase activity
ILQ33_00380	COG2197	response regulator
ILQ33_00385	COG3851	Histidine kinase
ILQ33_00390	COG2271	Major facilitator Superfamily
ILQ33_00395	COG2271	Major facilitator Superfamily
ILQ33_00425	COG2814	Major facilitator Superfamily
ILQ33_00435	COG1464	Belongs to the NlpA lipoprotein family
ILQ33_00440	COG0697	spore germination
ILQ33_00445	COG2814	Major facilitator Superfamily
ILQ33_00615	COG5492	domain, Protein
ILQ33_00670	COG4372	Transposase
ILQ33_00675	COG3436	PFAM IS66 Orf2 family protein
ILQ33_00740	COG0582	viral genome integration into host DNA
ILQ33_00750	COG2211	Major facilitator Superfamily
ILQ33_00755	COG1501	Belongs to the glycosyl hydrolase 31 family
ILQ33_00760	COG2982	Protein involved in outer membrane biogenesis
ILQ33_00765	COG2233	PERMEase
ILQ33_00770	COG0786	glutamate:sodium symporter activity
ILQ33_00780	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ILQ33_00785	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ILQ33_00790	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ILQ33_00800	COG0194	GDP metabolic process
ILQ33_00810	COG2860	membrane
ILQ33_00815	COG3645	SOS response
ILQ33_00820	COG1561	YicC-like family, N-terminal region
ILQ33_00845	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ILQ33_00875	COG1519	Transferase
ILQ33_00880	COG0859	PFAM glycosyl transferase family 9
ILQ33_00885	COG0438	transferase activity, transferring glycosyl groups
ILQ33_00890	COG0515	serine threonine protein kinase
ILQ33_00900	COG3642	lipopolysaccharide core region biosynthetic process
ILQ33_00920	COG0859	PFAM glycosyl transferase family 9
ILQ33_00925	COG0859	PFAM glycosyl transferase family 9
ILQ33_00940	COG0156	8-amino-7-oxononanoate synthase activity
ILQ33_00950	COG1216	Glycosyl transferase, family 2
ILQ33_00955	COG2861	carbohydrate metabolic process
ILQ33_00960	COG4942	peptidase
ILQ33_00970	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ILQ33_00975	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ILQ33_00990	COG1045	serine acetyltransferase
ILQ33_00995	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ILQ33_01005	COG2186	Transcriptional regulator
ILQ33_01010	COG1620	l-lactate permease
ILQ33_01015	COG5295	Hep Hag repeat protein
ILQ33_01035	COG3722	fumarate hydratase activity
ILQ33_01045	COG2213	PTS system mannitol-specific
ILQ33_01045	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_01055	COG1566	PFAM secretion protein HlyD family protein
ILQ33_01065	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ILQ33_01070	COG3209	COG3209 Rhs family protein
ILQ33_01075	COG0625	glutathione transferase activity
ILQ33_01085	COG3276	selenocysteine insertion sequence binding
ILQ33_01090	COG1454	alcohol dehydrogenase
ILQ33_01100	COG1012	belongs to the aldehyde dehydrogenase family
ILQ33_01110	COG1566	PFAM secretion protein HlyD family protein
ILQ33_01115	COG0583	DNA-binding transcription factor activity
ILQ33_01120	COG3713	MltA-interacting MipA family protein
ILQ33_01130	COG2211	Major facilitator Superfamily
ILQ33_01140	COG1414	Transcriptional regulator
ILQ33_01145	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_01150	COG3977	Valine--pyruvate aminotransferase
ILQ33_01155	COG0366	Alpha amylase catalytic
ILQ33_01160	COG2992	FlgJ-related protein
ILQ33_01165	COG1609	Transcriptional regulator
ILQ33_01165	COG2207	Transcriptional regulator
ILQ33_01170	COG4214	carbohydrate transport
ILQ33_01180	COG4213	ABC transporter substrate-binding protein
ILQ33_01190	COG1070	Carbohydrate kinase
ILQ33_01195	COG4682	membrane
ILQ33_01200	COG4682	membrane
ILQ33_01205	COG3274	enterobacterial common antigen metabolic process
ILQ33_01230	COG1278	Cold shock
ILQ33_01235	COG2944	sequence-specific DNA binding
ILQ33_01250	COG2885	chlorophyll binding
ILQ33_01255	COG0243	molybdopterin cofactor binding
ILQ33_01260	COG0456	acetyltransferase
ILQ33_01265	COG2818	Glycosylase
ILQ33_01270	COG5571	outer membrane autotransporter
ILQ33_01275	COG2223	nitrite transmembrane transporter activity
ILQ33_01280	COG3539	Fimbrial protein
ILQ33_01285	COG3121	Chaperone
ILQ33_01295	COG3539	Fimbrial protein
ILQ33_01300	COG3539	Fimbrial protein
ILQ33_01305	COG2194	sulfuric ester hydrolase activity
ILQ33_01315	COG0747	negative chemotaxis
ILQ33_01320	COG0601	transmembrane transport
ILQ33_01325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ33_01330	COG0444	Belongs to the ABC transporter superfamily
ILQ33_01335	COG4608	Belongs to the ABC transporter superfamily
ILQ33_01340	COG0814	amino acid
ILQ33_01350	COG2194	sulfuric ester hydrolase activity
ILQ33_01380	COG1215	transferase activity, transferring glycosyl groups
ILQ33_01385	COG1215	transferase activity, transferring glycosyl groups
ILQ33_01390	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
ILQ33_01395	COG3118	belongs to the thioredoxin family
ILQ33_01395	COG0457	Tetratricopeptide repeat
ILQ33_01400	COG2199	diguanylate cyclase activity
ILQ33_01400	COG2200	EAL domain
ILQ33_01410	COG0612	Peptidase, M16
ILQ33_01420	COG2200	EAL domain
ILQ33_01425	COG2982	Protein involved in outer membrane biogenesis
ILQ33_01430	COG0477	Major facilitator Superfamily
ILQ33_01435	COG1295	ribonuclease BN
ILQ33_01440	COG0583	DNA-binding transcription factor activity
ILQ33_01445	COG2197	response regulator
ILQ33_01455	COG1858	cytochrome C peroxidase
ILQ33_01460	COG0076	glutamate decarboxylase activity
ILQ33_01465	COG2207	Transcriptional regulator
ILQ33_01470	COG2207	Transcriptional regulator
ILQ33_01475	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ33_01480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_01490	COG2771	luxR family
ILQ33_01495	COG3247	response to pH
ILQ33_01510	COG1285	pathogenesis
ILQ33_01515	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ILQ33_01520	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ33_01530	COG3721	Heme iron utilization protein
ILQ33_01540	COG4558	Periplasmic binding protein
ILQ33_01545	COG4771	TonB-dependent receptor
ILQ33_01550	COG3720	iron ion transport
ILQ33_01555	COG2197	response regulator
ILQ33_01560	COG3065	identical protein binding
ILQ33_01570	COG1393	Belongs to the ArsC family
ILQ33_01575	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ILQ33_01580	COG0640	Transcriptional regulator
ILQ33_01590	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ILQ33_01595	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ILQ33_01600	COG0339	signal peptide processing
ILQ33_01610	COG3104	oligopeptide transport
ILQ33_01615	COG0589	response to stress
ILQ33_01625	COG0306	phosphate transporter
ILQ33_01630	COG2081	HI0933 family
ILQ33_01650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_01655	COG1129	ABC transporter
ILQ33_01655	COG0842	Transport permease protein
ILQ33_01660	COG0842	Transport permease protein
ILQ33_01675	COG0191	fructose-bisphosphate aldolase activity
ILQ33_01690	COG3775	system Galactitol-specific IIC component
ILQ33_01695	COG3414	Phosphotransferase system galactitol-specific IIB component
ILQ33_01705	COG2188	Transcriptional regulator
ILQ33_01715	COG1124	(ABC) transporter
ILQ33_01720	COG0444	Belongs to the ABC transporter superfamily
ILQ33_01725	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ33_01730	COG0601	transmembrane transport
ILQ33_01735	COG0747	negative chemotaxis
ILQ33_01740	COG2091	lysine biosynthetic process via aminoadipic acid
ILQ33_01745	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ33_01750	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_01760	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ33_01785	COG1216	Glycosyl transferase, family 2
ILQ33_01805	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ILQ33_01815	COG0204	Acyl-transferase
ILQ33_01835	COG0628	permease
ILQ33_01850	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ILQ33_01865	COG3714	YhhN family
ILQ33_01875	COG3776	membrane
ILQ33_01880	COG0742	ribosomal rna small subunit methyltransferase
ILQ33_01885	COG0552	protein localization to endoplasmic reticulum
ILQ33_01890	COG2884	Cell division ATP-binding protein ftsE
ILQ33_01895	COG2177	Part of the ABC transporter FtsEX involved in
ILQ33_01900	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ILQ33_01905	COG0683	leucine binding
ILQ33_01920	COG0456	acetyltransferase
ILQ33_01925	COG0683	leucine binding
ILQ33_01930	COG0559	Belongs to the binding-protein-dependent transport system permease family
ILQ33_01935	COG4177	L-phenylalanine transmembrane transporter activity
ILQ33_01940	COG0411	ABC transporter
ILQ33_01945	COG0410	ABC transporter
ILQ33_01955	COG1653	transport
ILQ33_01960	COG1175	transmembrane transport
ILQ33_01970	COG3842	ATPase activity
ILQ33_01975	COG0584	glycerophosphoryl diester phosphodiesterase
ILQ33_01985	COG0405	Gamma-glutamyltransferase
ILQ33_01995	COG1247	-acetyltransferase
ILQ33_02000	COG0673	inositol 2-dehydrogenase activity
ILQ33_02005	COG1741	Belongs to the pirin family
ILQ33_02010	COG1609	Transcriptional regulator
ILQ33_02015	COG3265	gluconokinase activity
ILQ33_02020	COG2610	gluconate transmembrane transporter activity
ILQ33_02025	COG0514	ATP-dependent DNA helicase (RecQ)
ILQ33_02045	COG2095	MarC family integral membrane protein
ILQ33_02050	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ILQ33_02055	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ILQ33_02075	COG0058	SHG alpha-glucan phosphorylase activity
ILQ33_02080	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ILQ33_02095	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ILQ33_02110	COG1349	DNA-binding transcription factor activity
ILQ33_02115	COG4650	regulator
ILQ33_02120	COG1690	Belongs to the RtcB family
ILQ33_02145	COG0058	SHG alpha-glucan phosphorylase activity
ILQ33_02150	COG1640	4-alpha-glucanotransferase
ILQ33_02155	COG2610	gluconate transmembrane transporter activity
ILQ33_02165	COG1040	competence protein
ILQ33_02175	COG5464	transposase or invertase
ILQ33_02185	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ILQ33_02190	COG1918	ferrous iron import across plasma membrane
ILQ33_02195	COG2183	response to ionizing radiation
ILQ33_02200	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ILQ33_02220	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ILQ33_02230	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ILQ33_02235	COG1011	Hydrolase
ILQ33_02245	COG0494	nUDIX hydrolase
ILQ33_02250	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ILQ33_02255	COG4972	Pilus assembly protein
ILQ33_02260	COG3166	PFAM Fimbrial assembly family protein
ILQ33_02275	COG4796	Type ii and iii secretion system protein
ILQ33_02290	COG3266	domain, Protein
ILQ33_02295	COG0338	D12 class N6 adenine-specific DNA methyltransferase
ILQ33_02300	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ILQ33_02305	COG0546	phosphoglycolate phosphatase activity
ILQ33_02310	COG0180	Tryptophanyl-tRNA synthetase
ILQ33_02315	COG2188	Transcriptional regulator
ILQ33_02325	COG1082	Xylose isomerase domain protein TIM barrel
ILQ33_02330	COG2222	sugar isomerase
ILQ33_02335	COG0531	amino acid
ILQ33_02350	COG2116	formate transmembrane transporter activity
ILQ33_02355	COG2146	nitrite reductase [NAD(P)H] activity
ILQ33_02360	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ILQ33_02370	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ILQ33_02380	COG2184	nucleotidyltransferase activity
ILQ33_02385	COG0512	Glutamine amidotransferase of anthranilate synthase
ILQ33_02390	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ILQ33_02395	COG1289	transmembrane transporter activity
ILQ33_02400	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ33_02405	COG1765	OsmC-like protein
ILQ33_02410	COG3954	Phosphoribulokinase
ILQ33_02420	COG0429	hydrolase of the alpha beta-hydrolase fold
ILQ33_02425	COG0488	(ABC) transporter
ILQ33_02440	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ILQ33_02445	COG1047	Peptidyl-prolyl cis-trans
ILQ33_02455	COG0545	Peptidyl-prolyl cis-trans isomerase
ILQ33_02460	COG2964	Protein conserved in bacteria
ILQ33_02530	COG0089	rRNA binding
ILQ33_02620	COG0201	protein transport
ILQ33_02660	COG0789	Transcriptional regulator
ILQ33_02665	COG3036	rescue of stalled ribosome
ILQ33_02675	COG0569	domain protein
ILQ33_02695	COG0758	DNA mediated transformation
ILQ33_02705	COG0551	DNA topoisomerase type I activity
ILQ33_02710	COG0009	L-threonylcarbamoyladenylate synthase
ILQ33_02725	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ILQ33_02765	COG1126	abc transporter atp-binding protein
ILQ33_02770	COG0765	amino acid transport
ILQ33_02775	COG4597	amino acid ABC transporter
ILQ33_02780	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_02795	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_02800	COG1309	transcriptional regulator
ILQ33_02810	COG2189	Belongs to the N(4) N(6)-methyltransferase family
ILQ33_02820	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ33_02830	COG4145	pantothenate transmembrane transporter activity
ILQ33_02835	COG3924	membrane
ILQ33_02840	COG0439	Biotin carboxylase
ILQ33_02845	COG0511	ligase activity, forming carbon-carbon bonds
ILQ33_02850	COG0604	alcohol dehydrogenase
ILQ33_02855	COG2200	EAL domain
ILQ33_02855	COG2199	diguanylate cyclase activity
ILQ33_02860	COG1077	Cell shape determining protein MreB Mrl
ILQ33_02865	COG1792	Involved in formation and maintenance of cell shape
ILQ33_02870	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ILQ33_02875	COG0424	maF-like protein
ILQ33_02880	COG1530	ribonuclease E activity
ILQ33_02885	COG3164	Protein of unknown function
ILQ33_02890	COG0312	modulator of DNA gyrase
ILQ33_02895	COG0583	DNA-binding transcription factor activity
ILQ33_02915	COG2732	(Barnase) inhibitor
ILQ33_02935	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ILQ33_02940	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ILQ33_02945	COG3105	Protein conserved in bacteria
ILQ33_02950	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ILQ33_02965	COG0625	glutathione transferase activity
ILQ33_02970	COG2969	positive regulation of protein catabolic process
ILQ33_02975	COG3069	C4-dicarboxylate transmembrane transporter activity
ILQ33_03005	COG2731	YhcH YjgK YiaL family protein
ILQ33_03010	COG4804	nuclease activity
ILQ33_03015	COG0493	'glutamate synthase
ILQ33_03020	COG0070	glutamate synthase
ILQ33_03020	COG0069	glutamate synthase activity
ILQ33_03020	COG0067	glutamate synthase
ILQ33_03025	COG1242	4 iron, 4 sulfur cluster binding
ILQ33_03030	COG0784	Response regulator, receiver
ILQ33_03030	COG5002	protein histidine kinase activity
ILQ33_03030	COG2198	Histidine kinase
ILQ33_03035	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
ILQ33_03045	COG0515	serine threonine protein kinase
ILQ33_03050	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_03065	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ILQ33_03070	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ILQ33_03075	COG1137	ATPase activity
ILQ33_03080	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ILQ33_03085	COG3117	lipopolysaccharide transmembrane transporter activity
ILQ33_03090	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ILQ33_03095	COG0517	IMP dehydrogenase activity
ILQ33_03095	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ILQ33_03100	COG0530	calcium, potassium:sodium antiporter activity
ILQ33_03105	COG1127	ABC transporter
ILQ33_03110	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ILQ33_03115	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ILQ33_03120	COG2854	intermembrane phospholipid transfer
ILQ33_03125	COG3113	response to antibiotic
ILQ33_03130	COG5007	Belongs to the BolA IbaG family
ILQ33_03140	COG3423	Transcriptional regulator
ILQ33_03145	COG0142	geranyltranstransferase activity
ILQ33_03160	COG0697	spore germination
ILQ33_03170	COG2027	D-alanyl-D-alanine carboxypeptidase
ILQ33_03175	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ILQ33_03180	COG1534	Rna-binding protein
ILQ33_03190	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ILQ33_03195	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ILQ33_03205	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ILQ33_03215	COG2194	sulfuric ester hydrolase activity
ILQ33_03235	COG0195	Participates in both transcription termination and antitermination
ILQ33_03275	COG0513	Belongs to the DEAD box helicase family
ILQ33_03280	COG0814	amino acid
ILQ33_03285	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ILQ33_03290	COG0826	peptidase U32
ILQ33_03295	COG0826	peptidase U32
ILQ33_03300	COG3154	lipid carrier protein
ILQ33_03305	COG3153	acetyltransferase
ILQ33_03315	COG3787	Belongs to the UPF0306 family
ILQ33_03320	COG0693	protein deglycase activity
ILQ33_03325	COG0702	epimerase
ILQ33_03330	COG0701	Predicted permease
ILQ33_03335	COG2823	Periplasmic or secreted lipoprotein
ILQ33_03355	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ILQ33_03375	COG3188	usher protein
ILQ33_03380	COG3121	Chaperone
ILQ33_03385	COG3539	Fimbrial protein
ILQ33_03395	COG3716	PTS system mannose fructose sorbose family IID component
ILQ33_03405	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_03415	COG2222	sugar isomerase
ILQ33_03420	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ILQ33_03425	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_03430	COG3716	PTS system mannose fructose sorbose family IID component
ILQ33_03440	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_03450	COG1349	DNA-binding transcription factor activity
ILQ33_03460	COG2002	toxin-antitoxin pair type II binding
ILQ33_03465	COG2721	sulfolactate sulfo-lyase activity
ILQ33_03470	COG2271	Major facilitator Superfamily
ILQ33_03480	COG2084	Dehydrogenase
ILQ33_03485	COG1929	Belongs to the glycerate kinase type-1 family
ILQ33_03510	COG0583	DNA-binding transcription factor activity
ILQ33_03515	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ILQ33_03525	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ILQ33_03530	COG1882	Formate acetyltransferase
ILQ33_03535	COG0251	oxidation-reduction process
ILQ33_03540	COG1760	l-serine dehydratase
ILQ33_03545	COG0814	amino acid
ILQ33_03560	COG1741	Belongs to the pirin family
ILQ33_03565	COG0583	DNA-binding transcription factor activity
ILQ33_03570	COG3152	Membrane
ILQ33_03575	COG3152	Membrane
ILQ33_03580	COG0435	Glutathione S-transferase
ILQ33_03585	COG2259	Doxx family
ILQ33_03595	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
ILQ33_03600	COG4575	ribosome binding
ILQ33_03605	COG1422	Protein of unknown function (DUF1090)
ILQ33_03615	COG0586	Pfam SNARE associated Golgi protein
ILQ33_03620	COG2186	Transcriptional regulator
ILQ33_03625	COG2271	Major facilitator Superfamily
ILQ33_03635	COG2721	sulfolactate sulfo-lyase activity
ILQ33_03645	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ILQ33_03650	COG0861	Integral membrane protein TerC family
ILQ33_03655	COG0673	inositol 2-dehydrogenase activity
ILQ33_03660	COG2949	membrane
ILQ33_03665	COG1451	nucleotide metabolic process
ILQ33_03675	COG4680	protein conserved in bacteria
ILQ33_03680	COG5499	transcription regulator containing HTH domain
ILQ33_03685	COG0446	pyridine nucleotide-disulphide oxidoreductase
ILQ33_03685	COG1902	pentaerythritol trinitrate reductase activity
ILQ33_03690	COG3408	Glycogen debranching enzyme
ILQ33_03690	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
ILQ33_03700	COG0531	amino acid
ILQ33_03705	COG2731	YhcH YjgK YiaL family protein
ILQ33_03710	COG3250	beta-galactosidase activity
ILQ33_03715	COG1609	Transcriptional regulator
ILQ33_03720	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ILQ33_03730	COG0840	transmembrane signaling receptor activity
ILQ33_03735	COG1695	Transcriptional regulator
ILQ33_03740	COG2375	cellular response to nickel ion
ILQ33_03755	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ILQ33_03760	COG0358	DNA primase activity
ILQ33_03765	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ILQ33_03775	COG0471	metal ion transport
ILQ33_03780	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_03785	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_03790	COG0583	DNA-binding transcription factor activity
ILQ33_03800	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ILQ33_03815	COG4991	sh3 domain protein
ILQ33_03820	COG3025	triphosphatase activity
ILQ33_03845	COG2268	Band 7 protein
ILQ33_03850	COG1585	Membrane protein implicated in regulation of membrane protease activity
ILQ33_03880	COG3384	dioxygenase
ILQ33_03885	COG0754	glutathionylspermidine amidase activity
ILQ33_03895	COG1538	Outer membrane efflux protein
ILQ33_03900	COG0494	nUDIX hydrolase
ILQ33_03905	COG3151	Protein conserved in bacteria
ILQ33_03910	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ILQ33_03915	COG3150	esterase
ILQ33_03920	COG0187	DNA topoisomerase II activity
ILQ33_03925	COG4774	siderophore transport
ILQ33_03930	COG1120	ATPase activity
ILQ33_03935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ33_03940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ33_03950	COG1737	Transcriptional regulator
ILQ33_03955	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ILQ33_03960	COG2249	NAD(P)H dehydrogenase (quinone) activity
ILQ33_03965	COG0642	Histidine kinase
ILQ33_03970	COG0745	RESPONSE REGULATOR receiver
ILQ33_03975	COG3111	PFAM Bacterial OB fold (BOF) protein
ILQ33_03980	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ILQ33_03985	COG4166	transmembrane transport
ILQ33_03990	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ILQ33_03995	COG0204	Acyl-transferase
ILQ33_04000	COG2132	Multicopper oxidase
ILQ33_04005	COG1032	radical SAM domain protein
ILQ33_04010	COG4238	major outer membrane lipoprotein
ILQ33_04020	COG0656	L-ascorbic acid biosynthetic process
ILQ33_04025	COG1979	alcohol dehydrogenase
ILQ33_04030	COG2207	Transcriptional regulator
ILQ33_04035	COG0586	Pfam SNARE associated Golgi protein
ILQ33_04040	COG0626	cystathionine gamma-synthase activity
ILQ33_04045	COG0811	peptide transport
ILQ33_04050	COG0848	biopolymer transport protein
ILQ33_04055	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_04065	COG0667	Aldo Keto reductase
ILQ33_04080	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ILQ33_04085	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_04090	COG5557	Pfam Polysulphide reductase, NrfD
ILQ33_04095	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
ILQ33_04100	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ILQ33_04105	COG1773	rubredoxin
ILQ33_04110	COG0375	protein maturation
ILQ33_04115	COG0298	carbon dioxide binding
ILQ33_04120	COG0625	glutathione transferase activity
ILQ33_04125	COG0754	glutathionylspermidine amidase activity
ILQ33_04150	COG3436	PFAM IS66 Orf2 family protein
ILQ33_04155	COG4372	Transposase
ILQ33_04160	COG3436	PFAM IS66 Orf2 family protein
ILQ33_04230	COG3436	PFAM IS66 Orf2 family protein
ILQ33_04245	COG0582	viral genome integration into host DNA
ILQ33_04255	COG1811	Na channel or pump
ILQ33_04260	COG1982	Orn Lys Arg decarboxylase major
ILQ33_04265	COG2211	Major facilitator Superfamily
ILQ33_04280	COG1194	a g-specific adenine glycosylase
ILQ33_04290	COG3171	Protein conserved in bacteria
ILQ33_04300	COG0252	asparaginase activity
ILQ33_04310	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ILQ33_04315	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ILQ33_04325	COG0762	integral membrane protein
ILQ33_04330	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ILQ33_04335	COG2805	Type II/IV secretion system protein
ILQ33_04350	COG0189	ligase activity
ILQ33_04355	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ILQ33_04360	COG2356	endonuclease I
ILQ33_04365	COG3091	SprT-like family
ILQ33_04370	COG2814	Major facilitator Superfamily
ILQ33_04390	COG1166	arginine decarboxylase activity
ILQ33_04405	COG0501	Belongs to the peptidase M48B family
ILQ33_04410	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ILQ33_04415	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_04420	COG2213	PTS system mannitol-specific
ILQ33_04425	COG1063	alcohol dehydrogenase
ILQ33_04430	COG1494	fructose-1,6-bisphosphatase
ILQ33_04440	COG1072	(Pantothenic acid kinase))
ILQ33_04445	COG1122	ATPase activity
ILQ33_04450	COG1122	ATPase activity
ILQ33_04475	COG0126	phosphoglycerate kinase activity
ILQ33_04480	COG0191	fructose-bisphosphate aldolase activity
ILQ33_04485	COG0668	transmembrane transport
ILQ33_04495	COG2968	Membrane
ILQ33_04505	COG0427	acetyl-CoA hydrolase
ILQ33_04510	COG1024	Enoyl-CoA hydratase
ILQ33_04515	COG1703	isobutyryl-CoA mutase activity
ILQ33_04520	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ILQ33_04520	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ILQ33_04535	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ILQ33_04550	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ILQ33_04570	COG0006	proline dipeptidase activity
ILQ33_04575	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ33_04580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ33_04605	COG2723	6-phospho-beta-galactosidase activity
ILQ33_04615	COG1272	protein, Hemolysin III
ILQ33_04625	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ILQ33_04635	COG0716	FMN binding
ILQ33_04640	COG4974	Belongs to the 'phage' integrase family
ILQ33_04645	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ILQ33_04650	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ILQ33_04660	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ILQ33_04680	COG2233	PERMEase
ILQ33_04705	COG2252	PERMEase
ILQ33_04710	COG0402	S-adenosylhomocysteine deaminase activity
ILQ33_04715	COG2233	PERMEase
ILQ33_04720	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ILQ33_04720	COG2080	2 iron, 2 sulfur cluster binding
ILQ33_04725	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ILQ33_04730	COG0402	S-adenosylhomocysteine deaminase activity
ILQ33_04735	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_04735	COG0493	'glutamate synthase
ILQ33_04740	COG2068	MobA-Related Protein
ILQ33_04745	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ILQ33_04750	COG3608	succinylglutamate desuccinylase aspartoacylase
ILQ33_04750	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ILQ33_04755	COG0549	Belongs to the carbamate kinase family
ILQ33_04765	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ILQ33_04770	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ILQ33_04775	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ILQ33_04780	COG3829	transcription factor binding
ILQ33_04785	COG2080	2 iron, 2 sulfur cluster binding
ILQ33_04790	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ILQ33_04795	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ILQ33_04800	COG4942	peptidase
ILQ33_04820	COG2207	Transcriptional regulator
ILQ33_04925	COG2197	response regulator
ILQ33_04930	COG0741	lytic transglycosylase activity
ILQ33_04940	COG3710	Transcriptional regulator
ILQ33_04940	COG0457	Tetratricopeptide repeat
ILQ33_04945	COG0457	Tetratricopeptide repeat
ILQ33_04970	COG3710	Transcriptional regulator
ILQ33_04975	COG2771	luxR family
ILQ33_04980	COG0814	amino acid
ILQ33_04985	COG0183	Belongs to the thiolase family
ILQ33_04995	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_05000	COG2814	Major facilitator Superfamily
ILQ33_05005	COG1794	racemase activity, acting on amino acids and derivatives
ILQ33_05010	COG0583	DNA-binding transcription factor activity
ILQ33_05020	COG1609	Transcriptional regulator
ILQ33_05035	COG0667	Aldo Keto reductase
ILQ33_05045	COG0861	Integral membrane protein TerC family
ILQ33_05060	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
ILQ33_05075	COG2165	general secretion pathway protein
ILQ33_05080	COG4795	General secretion pathway protein
ILQ33_05090	COG4967	type IV pilus modification protein PilV
ILQ33_05095	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ILQ33_05100	COG1025	Belongs to the peptidase M16 family
ILQ33_05105	COG1074	ATP-dependent DNA helicase activity
ILQ33_05110	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ILQ33_05115	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ILQ33_05115	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ILQ33_05120	COG0860	N-Acetylmuramoyl-L-alanine amidase
ILQ33_05140	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ILQ33_05145	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ILQ33_05150	COG2166	iron-sulfur cluster assembly
ILQ33_05155	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ILQ33_05165	COG0583	DNA-binding transcription factor activity
ILQ33_05170	COG2363	Small membrane protein
ILQ33_05180	COG1349	DNA-binding transcription factor activity
ILQ33_05190	COG1070	Carbohydrate kinase
ILQ33_05200	COG0738	Major facilitator superfamily
ILQ33_05205	COG0235	Class ii aldolase
ILQ33_05210	COG1454	alcohol dehydrogenase
ILQ33_05220	COG1760	l-serine dehydratase
ILQ33_05225	COG0814	amino acid
ILQ33_05230	COG1611	Belongs to the LOG family
ILQ33_05245	COG3098	single-species biofilm formation
ILQ33_05250	COG0564	pseudouridine synthase activity
ILQ33_05255	COG0716	FMN binding
ILQ33_05260	COG2271	Major facilitator Superfamily
ILQ33_05270	COG4948	Mandelate Racemase Muconate Lactonizing
ILQ33_05275	COG2205	protein histidine kinase activity
ILQ33_05275	COG3850	Histidine kinase
ILQ33_05275	COG3437	response regulator, receiver
ILQ33_05275	COG4999	Histidine kinase
ILQ33_05280	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ILQ33_05285	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ILQ33_05290	COG2336	PFAM SpoVT AbrB
ILQ33_05295	COG2337	Toxic component of a toxin-antitoxin (TA) module
ILQ33_05300	COG3956	TIGRFAM MazG family protein
ILQ33_05315	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ILQ33_05325	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ILQ33_05335	COG0602	queuosine metabolic process
ILQ33_05340	COG1070	Carbohydrate kinase
ILQ33_05345	COG2223	nitrite transmembrane transporter activity
ILQ33_05350	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_05355	COG0277	FAD linked oxidase domain protein
ILQ33_05365	COG2086	electron transfer activity
ILQ33_05375	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
ILQ33_05380	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ILQ33_05385	COG0644	oxidoreductase
ILQ33_05390	COG0720	synthase
ILQ33_05395	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ILQ33_05415	COG1203	CRISPR-associated helicase, Cas3
ILQ33_05430	COG1857	crispr-associated protein
ILQ33_05445	COG1518	maintenance of DNA repeat elements
ILQ33_05450	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ33_05455	COG2234	aminopeptidase activity
ILQ33_05510	COG1388	LysM domain
ILQ33_05510	COG4942	peptidase
ILQ33_05515	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ILQ33_05520	COG1846	Transcriptional regulator
ILQ33_05525	COG0163	prenyltransferase activity
ILQ33_05530	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ILQ33_05540	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ILQ33_05560	COG3604	Transcriptional regulator
ILQ33_05565	COG0309	Hydrogenase expression formation protein (HypE)
ILQ33_05570	COG0409	Hydrogenase expression formation protein
ILQ33_05575	COG0298	carbon dioxide binding
ILQ33_05580	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ILQ33_05585	COG0375	protein maturation
ILQ33_05595	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_05600	COG0651	ATP synthesis coupled electron transport
ILQ33_05605	COG0650	Formate hydrogenlyase subunit 4
ILQ33_05610	COG3261	NADH dehydrogenase
ILQ33_05610	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
ILQ33_05615	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ33_05620	COG3260	NADH ubiquinone oxidoreductase 20
ILQ33_05630	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ILQ33_05635	COG2723	6-phospho-beta-galactosidase activity
ILQ33_05640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_05640	COG1263	PTS System
ILQ33_05645	COG1609	Transcriptional regulator
ILQ33_05650	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_05655	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
ILQ33_05675	COG0517	IMP dehydrogenase activity
ILQ33_05675	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ILQ33_05680	COG1349	DNA-binding transcription factor activity
ILQ33_05685	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_05690	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_05710	COG2951	lytic endotransglycosylase activity
ILQ33_05715	COG1546	Belongs to the CinA family
ILQ33_05730	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ILQ33_05735	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ILQ33_05765	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ33_05770	COG1238	metal cluster binding
ILQ33_05785	COG2814	Major facilitator Superfamily
ILQ33_05790	COG1566	PFAM secretion protein HlyD family protein
ILQ33_05795	COG1846	Transcriptional regulator
ILQ33_05805	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ILQ33_05810	COG2814	Major facilitator Superfamily
ILQ33_05815	COG2113	Glycine betaine
ILQ33_05820	COG4176	ABC-type proline glycine betaine transport system permease component
ILQ33_05825	COG4175	Glycine betaine
ILQ33_05830	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ33_05835	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ33_05845	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ILQ33_05850	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ33_05860	COG4575	ribosome binding
ILQ33_05875	COG2916	Histone family protein nucleoid-structuring protein H-NS
ILQ33_05880	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ILQ33_05885	COG0640	Transcriptional regulator
ILQ33_05890	COG0401	homolog of Blt101
ILQ33_05895	COG1652	LysM domain
ILQ33_05900	COG1802	Transcriptional regulator
ILQ33_05905	COG1113	amino acid transport
ILQ33_05910	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ILQ33_05915	COG1012	belongs to the aldehyde dehydrogenase family
ILQ33_05920	COG0579	oxidoreductase
ILQ33_05945	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ILQ33_06070	COG3436	PFAM IS66 Orf2 family protein
ILQ33_06135	COG2867	negative regulation of translational initiation
ILQ33_06145	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ33_06150	COG0497	DNA recombination
ILQ33_06165	COG4536	flavin adenine dinucleotide binding
ILQ33_06170	COG4137	Cytochrome C assembly protein
ILQ33_06175	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ILQ33_06200	COG2885	chlorophyll binding
ILQ33_06205	COG2199	diguanylate cyclase activity
ILQ33_06220	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ILQ33_06225	COG0287	Prephenate dehydrogenase
ILQ33_06225	COG1605	Chorismate mutase
ILQ33_06230	COG1605	Chorismate mutase
ILQ33_06230	COG0077	Prephenate dehydratase
ILQ33_06240	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ILQ33_06245	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ33_06250	COG0564	pseudouridine synthase activity
ILQ33_06260	COG0542	response to heat
ILQ33_06285	COG0477	Major facilitator Superfamily
ILQ33_06290	COG5544	Lipoprotein
ILQ33_06295	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ILQ33_06300	COG1042	CoA-binding domain protein
ILQ33_06300	COG0045	succinate-CoA ligase (ADP-forming) activity
ILQ33_06300	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ILQ33_06305	COG3148	PFAM DTW domain containing protein
ILQ33_06310	COG3118	belongs to the thioredoxin family
ILQ33_06315	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ILQ33_06330	COG1280	lysine exporter protein (LysE YggA)
ILQ33_06335	COG0583	DNA-binding transcription factor activity
ILQ33_06340	COG0513	Belongs to the DEAD box helicase family
ILQ33_06345	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ILQ33_06350	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ILQ33_06360	COG1595	DNA-templated transcription, initiation
ILQ33_06365	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
ILQ33_06370	COG3026	antisigma factor binding
ILQ33_06375	COG3086	response to oxidative stress
ILQ33_06385	COG0681	Belongs to the peptidase S26 family
ILQ33_06405	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ILQ33_06420	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_06425	COG1737	Transcriptional regulator
ILQ33_06430	COG0560	Phosphoserine phosphatase
ILQ33_06435	COG0590	tRNA wobble adenosine to inosine editing
ILQ33_06440	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
ILQ33_06445	COG0047	phosphoribosylformylglycinamidine synthase activity
ILQ33_06445	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ILQ33_06450	COG2205	protein histidine kinase activity
ILQ33_06455	COG3170	Tfp pilus assembly protein FimV
ILQ33_06460	COG2204	response regulator
ILQ33_06465	COG0347	Belongs to the P(II) protein family
ILQ33_06470	COG1017	nitric oxide dioxygenase activity
ILQ33_06470	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ33_06480	COG1940	carbohydrate kinase activity
ILQ33_06485	COG0457	Tetratricopeptide repeat
ILQ33_06490	COG1879	ABC-type sugar transport system periplasmic component
ILQ33_06495	COG1129	ABC transporter
ILQ33_06500	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_06505	COG1063	alcohol dehydrogenase
ILQ33_06510	COG1063	alcohol dehydrogenase
ILQ33_06515	COG2017	converts alpha-aldose to the beta-anomer
ILQ33_06520	COG2259	Doxx family
ILQ33_06545	COG4638	Rieske (2fe-2S)
ILQ33_06550	COG0583	DNA-binding transcription factor activity
ILQ33_06555	COG2814	Major facilitator Superfamily
ILQ33_06560	COG3711	transcriptional antiterminator
ILQ33_06565	COG1073	alpha beta
ILQ33_06570	COG0483	inositol monophosphate 1-phosphatase activity
ILQ33_06590	COG0822	iron-sulfur transferase activity
ILQ33_06610	COG0633	Ferredoxin
ILQ33_06615	COG2975	iron-sulfur cluster assembly
ILQ33_06630	COG2897	thiosulfate sulfurtransferase activity
ILQ33_06635	COG2373	Large extracellular alpha-helical protein
ILQ33_06640	COG4953	penicillin-binding protein 1C
ILQ33_06645	COG0243	molybdopterin cofactor binding
ILQ33_06650	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_06655	COG3302	dmso reductase anchor subunit
ILQ33_06690	COG2976	Protein conserved in bacteria
ILQ33_06705	COG1645	bacterial-type flagellum-dependent swarming motility
ILQ33_06715	COG0517	IMP dehydrogenase activity
ILQ33_06715	COG0516	GMP reductase activity
ILQ33_06730	COG3133	Outer membrane lipoprotein
ILQ33_06745	COG2200	EAL domain
ILQ33_06750	COG0248	Ppx GppA phosphatase
ILQ33_06755	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ILQ33_06760	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ILQ33_06775	COG2233	PERMEase
ILQ33_06785	COG1393	Belongs to the ArsC family
ILQ33_06790	COG4783	chaperone-mediated protein folding
ILQ33_06795	COG0628	permease
ILQ33_06800	COG2116	formate transmembrane transporter activity
ILQ33_06805	COG3604	Transcriptional regulator
ILQ33_06815	COG3260	NADH ubiquinone oxidoreductase 20
ILQ33_06820	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ33_06825	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
ILQ33_06825	COG3261	NADH dehydrogenase
ILQ33_06830	COG0651	ATP synthesis coupled electron transport
ILQ33_06835	COG4237	Hydrogenase 4 membrane
ILQ33_06840	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ILQ33_06845	COG0650	Formate hydrogenlyase subunit 4
ILQ33_06855	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_06860	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ILQ33_06865	COG2716	regulation of RNA biosynthetic process
ILQ33_06875	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
ILQ33_06885	COG2321	neutral zinc metallopeptidase
ILQ33_06895	COG0400	carboxylic ester hydrolase activity
ILQ33_06910	COG1393	Belongs to the ArsC family
ILQ33_06920	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ33_06925	COG3850	Histidine kinase
ILQ33_06930	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_06930	COG0493	'glutamate synthase
ILQ33_06940	COG5342	invasion associated locus B
ILQ33_06945	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ILQ33_06950	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ33_06955	COG0281	malic enzyme
ILQ33_06955	COG0280	phosphate acetyltransferase
ILQ33_06960	COG4810	utilization protein
ILQ33_06965	COG4917	ethanolamine utilization protein
ILQ33_06970	COG4766	ethanolamine catabolic process
ILQ33_06975	COG4812	Cobalamin adenosyltransferase
ILQ33_06980	COG0280	phosphate acetyltransferase
ILQ33_06985	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
ILQ33_06990	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
ILQ33_06995	COG1012	belongs to the aldehyde dehydrogenase family
ILQ33_07000	COG4820	ethanolamine utilization protein (EutJ)
ILQ33_07005	COG1454	alcohol dehydrogenase
ILQ33_07010	COG3192	ethanolamine utilization protein
ILQ33_07015	COG4819	ethanolamine utilization protein
ILQ33_07020	COG4303	Ethanolamine ammonia lyase large subunit
ILQ33_07030	COG4816	utilization protein
ILQ33_07035	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
ILQ33_07040	COG2207	Transcriptional regulator
ILQ33_07050	COG0860	N-Acetylmuramoyl-L-alanine amidase
ILQ33_07070	COG2837	iron assimilation
ILQ33_07075	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ILQ33_07080	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_07080	COG1263	PTS System
ILQ33_07095	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_07100	COG4150	thiosulfate binding
ILQ33_07105	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ILQ33_07110	COG4208	sulfate ABC transporter
ILQ33_07115	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ILQ33_07120	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ILQ33_07135	COG2190	(PTS) system
ILQ33_07140	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ33_07145	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_07150	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ILQ33_07170	COG3530	Putative quorum-sensing-regulated virulence factor
ILQ33_07175	COG0385	Bile acid
ILQ33_07180	COG0583	DNA-binding transcription factor activity
ILQ33_07225	COG4372	Transposase
ILQ33_07230	COG3436	PFAM IS66 Orf2 family protein
ILQ33_07245	COG3415	Transposase
ILQ33_07250	COG3415	Transposase
ILQ33_07265	COG2199	diguanylate cyclase activity
ILQ33_07265	COG2200	EAL domain
ILQ33_07270	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ILQ33_07295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_07300	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_07305	COG0006	proline dipeptidase activity
ILQ33_07310	COG1363	Peptidase, m42
ILQ33_07315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_07315	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ33_07315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_07320	COG2207	Transcriptional regulator
ILQ33_07325	COG3279	Response regulator of the LytR AlgR family
ILQ33_07330	COG3275	phosphorelay sensor kinase activity
ILQ33_07335	COG0436	Aminotransferase
ILQ33_07345	COG1560	Kdo2-lipid A biosynthetic process
ILQ33_07370	COG0028	Belongs to the TPP enzyme family
ILQ33_07375	COG0679	Auxin Efflux Carrier
ILQ33_07385	COG2198	Histidine kinase
ILQ33_07385	COG2205	protein histidine kinase activity
ILQ33_07385	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_07385	COG0784	Response regulator, receiver
ILQ33_07390	COG2197	response regulator
ILQ33_07395	COG1566	PFAM secretion protein HlyD family protein
ILQ33_07400	COG0477	Major facilitator Superfamily
ILQ33_07475	COG0582	viral genome integration into host DNA
ILQ33_07610	COG0515	serine threonine protein kinase
ILQ33_07610	COG2815	serine threonine protein kinase
ILQ33_07750	COG3772	lysozyme
ILQ33_07905	COG2116	formate transmembrane transporter activity
ILQ33_07910	COG2853	Lipoprotein
ILQ33_07920	COG2067	long-chain fatty acid transport protein
ILQ33_07925	COG3691	Protein conserved in bacteria
ILQ33_07940	COG2062	phosphohistidine phosphatase, SixA
ILQ33_07945	COG3539	Fimbrial protein
ILQ33_07950	COG3188	usher protein
ILQ33_07955	COG3121	Chaperone
ILQ33_07960	COG3539	Fimbrial protein
ILQ33_07965	COG3539	Fimbrial protein
ILQ33_07970	COG3539	Fimbrial protein
ILQ33_08000	COG0730	response to heat
ILQ33_08005	COG3101	peptidyl-lysine hydroxylation
ILQ33_08015	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ILQ33_08015	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ILQ33_08020	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ33_08025	COG2814	Major facilitator Superfamily
ILQ33_08040	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ILQ33_08050	COG0586	Pfam SNARE associated Golgi protein
ILQ33_08060	COG0285	dihydrofolate synthase activity
ILQ33_08065	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
ILQ33_08070	COG1286	toxin biosynthetic process
ILQ33_08075	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ILQ33_08080	COG0163	prenyltransferase activity
ILQ33_08085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_08090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_08095	COG4215	(ABC) transporter
ILQ33_08100	COG4160	amino acid transport
ILQ33_08105	COG4598	ABC transporter
ILQ33_08110	COG5464	transposase or invertase
ILQ33_08115	COG1090	epimerase
ILQ33_08120	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ILQ33_08125	COG0625	glutathione transferase activity
ILQ33_08130	COG0625	glutathione transferase activity
ILQ33_08135	COG0622	Phosphoesterase
ILQ33_08140	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
ILQ33_08145	COG1288	antiporter activity
ILQ33_08150	COG0280	phosphate acetyltransferase
ILQ33_08150	COG0857	belongs to the CobB CobQ family
ILQ33_08155	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ILQ33_08170	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ33_08175	COG0490	domain, Protein
ILQ33_08175	COG0471	metal ion transport
ILQ33_08185	COG0436	Aminotransferase
ILQ33_08190	COG0583	DNA-binding transcription factor activity
ILQ33_08210	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ILQ33_08215	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ILQ33_08220	COG1034	ATP synthesis coupled electron transport
ILQ33_08235	COG0839	Belongs to the complex I subunit 6 family
ILQ33_08245	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ILQ33_08250	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ33_08270	COG5160	protein modification by small protein removal
ILQ33_08275	COG1234	tRNA 3'-trailer cleavage
ILQ33_08280	COG2153	protein acetylation
ILQ33_08285	COG4575	ribosome binding
ILQ33_08290	COG1169	isochorismate synthase
ILQ33_08305	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ILQ33_08315	COG0318	PFAM AMP-dependent synthetase and ligase
ILQ33_08360	COG0406	alpha-ribazole phosphatase activity
ILQ33_08380	COG1414	Transcriptional regulator
ILQ33_08385	COG4948	Mandelate Racemase Muconate Lactonizing
ILQ33_08390	COG2271	Major facilitator Superfamily
ILQ33_08395	COG3836	Belongs to the HpcH HpaI aldolase family
ILQ33_08400	COG5464	transposase or invertase
ILQ33_08405	COG0247	lactate metabolic process
ILQ33_08415	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ILQ33_08420	COG2271	Major facilitator Superfamily
ILQ33_08425	COG0584	glycerophosphoryl diester phosphodiesterase
ILQ33_08435	COG0583	DNA-binding transcription factor activity
ILQ33_08440	COG2814	Major facilitator Superfamily
ILQ33_08445	COG3642	lipopolysaccharide core region biosynthetic process
ILQ33_08450	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ33_08455	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ33_08460	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ33_08465	COG3468	outer membrane autotransporter barrel domain protein
ILQ33_08475	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ILQ33_08480	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
ILQ33_08485	COG3234	Protein of unknown function (DUF1175)
ILQ33_08490	COG2373	Large extracellular alpha-helical protein
ILQ33_08495	COG5445	Predicted secreted protein (DUF2300)
ILQ33_08500	COG5445	Predicted secreted protein (DUF2300)
ILQ33_08505	COG4676	Protein conserved in bacteria
ILQ33_08510	COG2205	protein histidine kinase activity
ILQ33_08510	COG0784	Response regulator, receiver
ILQ33_08515	COG2197	response regulator
ILQ33_08520	COG0642	Histidine kinase
ILQ33_08520	COG2198	Histidine kinase
ILQ33_08525	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ILQ33_08530	COG1477	protein flavinylation
ILQ33_08535	COG2169	Transcriptional regulator
ILQ33_08535	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ILQ33_08540	COG3145	DNA-N1-methyladenine dioxygenase activity
ILQ33_08545	COG4615	Cyclic peptide transporter
ILQ33_08560	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_08560	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ33_08565	COG3062	negative regulation of establishment of protein localization
ILQ33_08575	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_08580	COG0348	domain, Protein
ILQ33_08585	COG3043	anaerobic respiration
ILQ33_08590	COG3005	denitrification pathway
ILQ33_08595	COG4133	protoheme IX ABC transporter activity
ILQ33_08600	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ILQ33_08605	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ILQ33_08610	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ILQ33_08620	COG1138	Cytochrome C-type biogenesis protein
ILQ33_08625	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ILQ33_08630	COG4235	cytochrome complex assembly
ILQ33_08630	COG3088	subunit of a heme lyase
ILQ33_08635	COG2197	response regulator
ILQ33_08640	COG3468	outer membrane autotransporter barrel domain protein
ILQ33_08650	COG3083	sulfuric ester hydrolase activity
ILQ33_08670	COG1061	Type III restriction enzyme res subunit
ILQ33_08675	COG1187	pseudouridine synthase activity
ILQ33_08680	COG2814	Major facilitator Superfamily
ILQ33_08690	COG4172	Belongs to the ABC transporter superfamily
ILQ33_08695	COG4239	(ABC) transporter, permease
ILQ33_08700	COG4174	ABC transporter (Permease)
ILQ33_08705	COG4166	transmembrane transport
ILQ33_08710	COG2200	EAL domain
ILQ33_08715	COG0791	NLP P60 protein
ILQ33_08720	COG0671	phosphoesterase, PA-phosphatase related
ILQ33_08725	COG0523	cobalamin synthesis protein
ILQ33_08730	COG0246	Mannitol dehydrogenase
ILQ33_08745	COG2814	Major facilitator Superfamily
ILQ33_08750	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_08750	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_08755	COG1105	Belongs to the carbohydrate kinase PfkB family
ILQ33_08760	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_08760	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ILQ33_08760	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_08765	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_08770	COG2313	pseudouridylate synthase activity
ILQ33_08775	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ILQ33_08780	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ33_08790	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ILQ33_08795	COG1522	sequence-specific DNA binding
ILQ33_08795	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_08805	COG2855	membrane
ILQ33_08810	COG0583	DNA-binding transcription factor activity
ILQ33_08815	COG0833	amino acid
ILQ33_08820	COG4771	TonB-dependent receptor
ILQ33_08825	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ILQ33_08835	COG2311	Membrane
ILQ33_08840	COG1609	Transcriptional regulator
ILQ33_08845	COG1879	ABC-type sugar transport system periplasmic component
ILQ33_08850	COG1129	ABC transporter
ILQ33_08855	COG4211	Belongs to the binding-protein-dependent transport system permease family
ILQ33_08860	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ILQ33_08860	COG0167	dihydroorotate dehydrogenase activity
ILQ33_08865	COG0493	'glutamate synthase
ILQ33_08875	COG2949	membrane
ILQ33_08885	COG1346	cytolysis
ILQ33_08900	COG2271	Major facilitator Superfamily
ILQ33_08915	COG0625	glutathione transferase activity
ILQ33_08920	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ33_08925	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ33_08935	COG1538	Outer membrane efflux protein
ILQ33_08940	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_08945	COG0586	Pfam SNARE associated Golgi protein
ILQ33_08955	COG1686	Belongs to the peptidase S11 family
ILQ33_08960	COG0277	FAD linked oxidase domain protein
ILQ33_08965	COG1472	Belongs to the glycosyl hydrolase 3 family
ILQ33_08970	COG1732	Glycine betaine
ILQ33_08975	COG1174	glycine betaine transport
ILQ33_08980	COG1125	glycine betaine transport
ILQ33_08985	COG1174	glycine betaine transport
ILQ33_08995	COG0789	Transcriptional regulator
ILQ33_09220	COG3772	lysozyme
ILQ33_09265	COG0740	serine-type endopeptidase activity
ILQ33_09340	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_09355	COG3275	phosphorelay sensor kinase activity
ILQ33_09360	COG3279	Response regulator of the LytR AlgR family
ILQ33_09365	COG4807	Protein conserved in bacteria
ILQ33_09370	COG4808	Protein conserved in bacteria
ILQ33_09380	COG3552	Protein containing von Willebrand factor type A (VWA) domain
ILQ33_09385	COG2425	protein containing a von Willebrand factor type A (vWA) domain
ILQ33_09390	COG2425	protein containing a von Willebrand factor type A (vWA) domain
ILQ33_09395	COG0714	Associated with various cellular activities
ILQ33_09405	COG3831	ATPase activity
ILQ33_09425	COG0489	protein tyrosine kinase activity
ILQ33_09435	COG3539	Fimbrial protein
ILQ33_09440	COG3121	Chaperone
ILQ33_09450	COG3539	Fimbrial protein
ILQ33_09455	COG5455	response to cobalt ion
ILQ33_09460	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ILQ33_09490	COG0351	phosphomethylpyrimidine kinase
ILQ33_09495	COG3757	hydrolase, family 25
ILQ33_09500	COG2188	Transcriptional regulator
ILQ33_09505	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_09510	COG1397	ADP-ribosylglycohydrolase
ILQ33_09515	COG2211	Major facilitator Superfamily
ILQ33_09520	COG1830	Aldolase
ILQ33_09535	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_09540	COG3414	Phosphotransferase system galactitol-specific IIB component
ILQ33_09545	COG3775	system Galactitol-specific IIC component
ILQ33_09550	COG1063	alcohol dehydrogenase
ILQ33_09570	COG0826	peptidase U32
ILQ33_09575	COG3422	double-strand break repair
ILQ33_09580	COG0745	RESPONSE REGULATOR receiver
ILQ33_09585	COG2205	protein histidine kinase activity
ILQ33_09600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ33_09625	COG4245	von Willebrand factor, type A
ILQ33_09630	COG0631	protein serine/threonine phosphatase activity
ILQ33_09635	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
ILQ33_09640	COG0443	Heat shock 70 kDa protein
ILQ33_09645	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ILQ33_09655	COG0572	uridine kinase
ILQ33_09665	COG2982	Protein involved in outer membrane biogenesis
ILQ33_09680	COG1253	flavin adenine dinucleotide binding
ILQ33_09690	COG1596	polysaccharide export
ILQ33_09695	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ILQ33_09700	COG0489	protein tyrosine kinase activity
ILQ33_09700	COG3206	protein involved in exopolysaccharide biosynthesis
ILQ33_09705	COG0463	Glycosyl transferase, family 2
ILQ33_09710	COG1045	serine acetyltransferase
ILQ33_09715	COG0438	transferase activity, transferring glycosyl groups
ILQ33_09725	COG1216	Glycosyl transferase, family 2
ILQ33_09730	COG0110	maltose O-acetyltransferase activity
ILQ33_09735	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
ILQ33_09740	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ33_09745	COG1051	belongs to the nudix hydrolase family
ILQ33_09750	COG0297	glycogen (starch) synthase activity
ILQ33_09755	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ILQ33_09755	COG0662	Cupin 2, conserved barrel domain protein
ILQ33_09760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ILQ33_09765	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ILQ33_09770	COG2244	polysaccharide biosynthetic process
ILQ33_09775	COG2327	Polysaccharide pyruvyl transferase
ILQ33_09780	COG0438	transferase activity, transferring glycosyl groups
ILQ33_09790	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ33_09795	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ILQ33_09820	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ILQ33_09830	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
ILQ33_09835	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ33_09840	COG1051	belongs to the nudix hydrolase family
ILQ33_09845	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ILQ33_09845	COG0662	Cupin 2, conserved barrel domain protein
ILQ33_09850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ILQ33_09860	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ILQ33_09865	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ILQ33_09890	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ILQ33_09895	COG0131	Imidazoleglycerol-phosphate dehydratase
ILQ33_09895	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ILQ33_09905	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ILQ33_09920	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ33_09925	COG0583	DNA-binding transcription factor activity
ILQ33_09935	COG0531	amino acid
ILQ33_09940	COG2391	methyltransferase activity
ILQ33_09945	COG0425	Belongs to the sulfur carrier protein TusA family
ILQ33_09950	COG2925	Exonuclease
ILQ33_10215	COG3772	lysozyme
ILQ33_10340	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_10350	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ILQ33_10360	COG1686	Belongs to the peptidase S11 family
ILQ33_10370	COG1289	transmembrane transporter activity
ILQ33_10380	COG4917	ethanolamine utilization protein
ILQ33_10415	COG2003	Belongs to the UPF0758 family
ILQ33_10460	COG4771	TonB-dependent receptor
ILQ33_10465	COG4372	Transposase
ILQ33_10470	COG3436	PFAM IS66 Orf2 family protein
ILQ33_10480	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
ILQ33_10495	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ33_10505	COG0583	DNA-binding transcription factor activity
ILQ33_10510	COG0583	DNA-binding transcription factor activity
ILQ33_10520	COG0534	Mate efflux family protein
ILQ33_10530	COG0217	transcriptional regulatory protein
ILQ33_10535	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ILQ33_10540	COG0477	Major facilitator Superfamily
ILQ33_10590	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ33_10635	COG1846	Transcriptional regulator
ILQ33_10680	COG1403	HNH endonuclease
ILQ33_10685	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ33_10740	COG3772	lysozyme
ILQ33_10770	COG4220	transposase activity
ILQ33_10855	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_10875	COG3038	cytochrome b561
ILQ33_10880	COG3443	Belongs to the bacterial solute-binding protein 9 family
ILQ33_10895	COG2351	hydroxyisourate hydrolase activity
ILQ33_10900	COG0745	RESPONSE REGULATOR receiver
ILQ33_10905	COG2205	protein histidine kinase activity
ILQ33_10925	COG1418	mRNA catabolic process
ILQ33_10930	COG0270	DNA (cytosine-5-)-methyltransferase activity
ILQ33_10935	COG3727	T/G mismatch-specific endonuclease activity
ILQ33_10940	COG0697	spore germination
ILQ33_10945	COG2354	Protein conserved in bacteria
ILQ33_10950	COG5475	Uncharacterized small protein (DUF2158)
ILQ33_10955	COG3706	GGDEF domain
ILQ33_10975	COG2197	response regulator
ILQ33_10980	COG1684	flagellar biosynthetic protein fliR
ILQ33_10985	COG1987	bacterial-type flagellum assembly
ILQ33_10990	COG1338	Plays a role in the flagellum-specific transport system
ILQ33_10995	COG3190	flagellar
ILQ33_11000	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ILQ33_11005	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ILQ33_11010	COG1580	Controls the rotational direction of flagella during chemotaxis
ILQ33_11015	COG3144	bacterial-type flagellum assembly
ILQ33_11020	COG2882	bacterial-type flagellum organization
ILQ33_11025	COG1157	protein secretion by the type III secretion system
ILQ33_11030	COG1317	bacterial-type flagellum organization
ILQ33_11035	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ILQ33_11040	COG1766	The M ring may be actively involved in energy transduction
ILQ33_11055	COG0454	-acetyltransferase
ILQ33_11065	COG0454	-acetyltransferase
ILQ33_11070	COG2135	peptidase activity
ILQ33_11075	COG0425	Belongs to the sulfur carrier protein TusA family
ILQ33_11080	COG2391	methyltransferase activity
ILQ33_11090	COG0366	Alpha amylase catalytic
ILQ33_11100	COG1516	flagellar protein fliS
ILQ33_11105	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ILQ33_11115	COG1191	sigma factor activity
ILQ33_11125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_11135	COG0765	amino acid transport
ILQ33_11140	COG1126	abc transporter atp-binding protein
ILQ33_11145	COG2197	response regulator
ILQ33_11160	COG2197	response regulator
ILQ33_11200	COG2826	transposase and inactivated derivatives, IS30 family
ILQ33_11245	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ33_11345	COG4974	Belongs to the 'phage' integrase family
ILQ33_11350	COG3012	SEC-C Motif Domain Protein
ILQ33_11350	COG3318	Belongs to the UPF0149 family
ILQ33_11355	COG0814	amino acid
ILQ33_11365	COG1528	Iron-storage protein
ILQ33_11385	COG1528	Iron-storage protein
ILQ33_11390	COG1879	ABC-type sugar transport system periplasmic component
ILQ33_11395	COG1129	ABC transporter
ILQ33_11400	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_11405	COG1877	trehalose-phosphatase activity
ILQ33_11415	COG0589	response to stress
ILQ33_11430	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ILQ33_11435	COG1360	Flagellar Motor Protein
ILQ33_11440	COG0643	Histidine kinase
ILQ33_11440	COG2198	Histidine kinase
ILQ33_11445	COG0835	chemotaxis
ILQ33_11450	COG0840	transmembrane signaling receptor activity
ILQ33_11455	COG0840	transmembrane signaling receptor activity
ILQ33_11460	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ILQ33_11465	COG2201	protein-glutamate methylesterase activity
ILQ33_11470	COG0745	RESPONSE REGULATOR receiver
ILQ33_11480	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ILQ33_11485	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ILQ33_11495	COG3755	Protein conserved in bacteria
ILQ33_11505	COG3102	Protein conserved in bacteria
ILQ33_11515	COG3005	denitrification pathway
ILQ33_11520	COG0243	molybdopterin cofactor binding
ILQ33_11535	COG3788	relative of glutathione S-transferase, MAPEG superfamily
ILQ33_11540	COG1801	Protein of unknown function DUF72
ILQ33_11545	COG1335	isochorismatase
ILQ33_11550	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ILQ33_11555	COG0494	nUDIX hydrolase
ILQ33_11560	COG0217	transcriptional regulatory protein
ILQ33_11590	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ILQ33_11600	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
ILQ33_11605	COG0739	heme binding
ILQ33_11610	COG1560	Kdo2-lipid A biosynthetic process
ILQ33_11615	COG0469	pyruvate kinase activity
ILQ33_11620	COG1737	Transcriptional regulator
ILQ33_11625	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ILQ33_11630	COG0129	dihydroxy-acid dehydratase activity
ILQ33_11635	COG0800	Aldolase
ILQ33_11640	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ILQ33_11645	COG3141	response to X-ray
ILQ33_11655	COG2979	Protein of unknown function (DUF533)
ILQ33_11660	COG1770	oligopeptidase
ILQ33_11665	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ33_11670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ILQ33_11680	COG2372	response to copper ion
ILQ33_11685	COG1276	copper resistance
ILQ33_11695	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ILQ33_11715	COG3008	intermembrane lipid transfer
ILQ33_11720	COG2995	paraquat-inducible protein a
ILQ33_11725	COG1956	GAF domain-containing protein
ILQ33_11735	COG0793	Belongs to the peptidase S41A family
ILQ33_11745	COG2814	Major facilitator Superfamily
ILQ33_11750	COG1414	Transcriptional regulator
ILQ33_11780	COG2226	methyltransferase
ILQ33_11795	COG3716	PTS system mannose fructose sorbose family IID component
ILQ33_11800	COG3715	PTS system
ILQ33_11805	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_11805	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_11810	COG1253	flavin adenine dinucleotide binding
ILQ33_11815	COG2200	EAL domain
ILQ33_11820	COG1760	l-serine dehydratase
ILQ33_11830	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ILQ33_11845	COG0251	oxidation-reduction process
ILQ33_11850	COG1199	ATP-dependent helicase activity
ILQ33_11855	COG1214	PFAM Peptidase M22, glycoprotease
ILQ33_11860	COG3065	identical protein binding
ILQ33_11865	COG0318	PFAM AMP-dependent synthetase and ligase
ILQ33_11870	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
ILQ33_11875	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ33_11880	COG4638	Rieske (2fe-2S)
ILQ33_11885	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ILQ33_11890	COG0473	3-isopropylmalate dehydrogenase activity
ILQ33_11895	COG0583	DNA-binding transcription factor activity
ILQ33_11900	COG1280	lysine exporter protein (LysE YggA)
ILQ33_11905	COG3615	Tellurite resistance protein tehB
ILQ33_11915	COG2261	transglycosylase associated protein
ILQ33_11935	COG3042	response to heat
ILQ33_11940	COG3189	MarR family transcriptional regulator
ILQ33_11945	COG2807	transmembrane transport
ILQ33_11950	COG2207	Transcriptional regulator
ILQ33_11965	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ILQ33_11970	COG2199	diguanylate cyclase activity
ILQ33_11975	COG2199	diguanylate cyclase activity
ILQ33_11985	COG2766	serine protein kinase
ILQ33_11990	COG3713	MltA-interacting MipA family protein
ILQ33_11995	COG0656	L-ascorbic acid biosynthetic process
ILQ33_12000	COG0676	glucose-6-phosphate 1-epimerase activity
ILQ33_12005	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ILQ33_12015	COG3139	Protein of unknown function (DUF1315)
ILQ33_12020	COG1063	alcohol dehydrogenase
ILQ33_12025	COG2271	Major facilitator Superfamily
ILQ33_12030	COG1063	alcohol dehydrogenase
ILQ33_12035	COG0191	fructose-bisphosphate aldolase activity
ILQ33_12040	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_12045	COG0667	Aldo Keto reductase
ILQ33_12050	COG1349	DNA-binding transcription factor activity
ILQ33_12065	COG1335	isochorismatase
ILQ33_12070	COG0252	asparaginase activity
ILQ33_12080	COG0616	signal peptide processing
ILQ33_12085	COG0778	Nitroreductase
ILQ33_12090	COG0709	Synthesizes selenophosphate from selenide and ATP
ILQ33_12095	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ILQ33_12105	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ILQ33_12115	COG0494	nUDIX hydrolase
ILQ33_12120	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ILQ33_12125	COG2897	thiosulfate sulfurtransferase activity
ILQ33_12130	COG4136	ATPase activity
ILQ33_12135	COG4135	transport system, permease component
ILQ33_12140	COG4134	Bacterial extracellular solute-binding protein
ILQ33_12145	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ33_12150	COG0398	Pfam SNARE associated Golgi protein
ILQ33_12160	COG0398	Pfam SNARE associated Golgi protein
ILQ33_12165	COG0708	Exodeoxyribonuclease III
ILQ33_12195	COG3678	ATP-independent chaperone mediated protein folding
ILQ33_12205	COG0322	excinuclease ABC activity
ILQ33_12215	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ33_12220	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ILQ33_12225	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ILQ33_12230	COG1447	Phosphotransferase system cellobiose-specific component IIA
ILQ33_12235	COG2169	Transcriptional regulator
ILQ33_12235	COG1917	Cupin 2, conserved barrel domain protein
ILQ33_12240	COG1486	melibiose metabolic process
ILQ33_12250	COG0753	catalase activity
ILQ33_12265	COG1823	symporter activity
ILQ33_12270	COG1988	membrane-bound metal-dependent
ILQ33_12275	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ33_12285	COG3001	Fructosamine kinase
ILQ33_12295	COG1105	Belongs to the carbohydrate kinase PfkB family
ILQ33_12300	COG3137	Salt-induced outer membrane protein
ILQ33_12345	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ILQ33_12345	COG0072	phenylalanine-tRNA ligase activity
ILQ33_12360	COG0386	Belongs to the glutathione peroxidase family
ILQ33_12370	COG0791	NLP P60 protein
ILQ33_12375	COG2200	EAL domain
ILQ33_12385	COG4256	Hemin uptake protein
ILQ33_12390	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ILQ33_12400	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ33_12400	COG0574	Belongs to the PEP-utilizing enzyme family
ILQ33_12405	COG0318	PFAM AMP-dependent synthetase and ligase
ILQ33_12410	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ILQ33_12415	COG0644	oxidoreductase
ILQ33_12420	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ILQ33_12425	COG2086	electron transfer activity
ILQ33_12430	COG1917	Cupin 2, conserved barrel domain protein
ILQ33_12430	COG2207	Transcriptional regulator
ILQ33_12435	COG1960	acyl-CoA dehydrogenase activity
ILQ33_12440	COG4670	ketone body catabolic process
ILQ33_12455	COG2271	Major facilitator Superfamily
ILQ33_12460	COG0738	Major facilitator superfamily
ILQ33_12475	COG0628	permease
ILQ33_12480	COG0277	FAD linked oxidase domain protein
ILQ33_12480	COG0247	lactate metabolic process
ILQ33_12485	COG2050	protein possibly involved in aromatic compounds catabolism
ILQ33_12495	COG0316	Belongs to the HesB IscA family
ILQ33_12500	COG0719	Fe-S assembly protein
ILQ33_12505	COG0396	ATPase activity
ILQ33_12510	COG0719	Fe-S assembly protein
ILQ33_12525	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ33_12530	COG4238	major outer membrane lipoprotein
ILQ33_12535	COG0469	pyruvate kinase activity
ILQ33_12545	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_12550	COG2414	aldehyde ferredoxin oxidoreductase
ILQ33_12560	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_12565	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
ILQ33_12575	COG4529	Protein conserved in bacteria
ILQ33_12595	COG3468	outer membrane autotransporter barrel domain protein
ILQ33_12605	COG0307	riboflavin synthase, alpha
ILQ33_12610	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ILQ33_12615	COG2814	Major facilitator Superfamily
ILQ33_12620	COG0583	DNA-binding transcription factor activity
ILQ33_12635	COG2814	Major facilitator Superfamily
ILQ33_12640	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ILQ33_12645	COG0791	NLP P60 protein
ILQ33_12650	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ILQ33_12655	COG1201	RNA secondary structure unwinding
ILQ33_12665	COG0346	lactoylglutathione lyase activity
ILQ33_12670	COG1902	pentaerythritol trinitrate reductase activity
ILQ33_12675	COG1309	transcriptional regulator
ILQ33_12680	COG3313	Fe-S protein
ILQ33_12690	COG2032	superoxide dismutase activity
ILQ33_12695	COG1289	transmembrane transporter activity
ILQ33_12700	COG1566	PFAM secretion protein HlyD family protein
ILQ33_12715	COG3133	Outer membrane lipoprotein
ILQ33_12725	COG3895	Periplasmic Protein
ILQ33_12740	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ILQ33_12745	COG0625	glutathione transferase activity
ILQ33_12750	COG3104	oligopeptide transport
ILQ33_12755	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ILQ33_12765	COG4659	FMN binding
ILQ33_12775	COG4656	Part of a membrane complex involved in electron transport
ILQ33_12805	COG0673	inositol 2-dehydrogenase activity
ILQ33_12815	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ILQ33_12820	COG1263	PTS System
ILQ33_12820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_12825	COG1609	Transcriptional regulator
ILQ33_12830	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_12835	COG1309	transcriptional regulator
ILQ33_12855	COG5339	Protein conserved in bacteria
ILQ33_12860	COG1482	cell wall glycoprotein biosynthetic process
ILQ33_12865	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_12865	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_12870	COG0114	fumarate hydratase activity
ILQ33_12880	COG2205	protein histidine kinase activity
ILQ33_12885	COG0745	RESPONSE REGULATOR receiver
ILQ33_12890	COG3136	membrane protein required for alginate biosynthesis
ILQ33_12900	COG0531	amino acid
ILQ33_12910	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ILQ33_12915	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ILQ33_12920	COG0628	permease
ILQ33_12935	COG3591	Belongs to the peptidase S1B family
ILQ33_12950	COG2814	Major facilitator Superfamily
ILQ33_12955	COG0583	DNA-binding transcription factor activity
ILQ33_12960	COG1940	carbohydrate kinase activity
ILQ33_12965	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ILQ33_12975	COG3381	protein complex oligomerization
ILQ33_12980	COG3302	dmso reductase anchor subunit
ILQ33_12985	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_12990	COG0243	molybdopterin cofactor binding
ILQ33_12995	COG0243	molybdopterin cofactor binding
ILQ33_13010	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ILQ33_13035	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ33_13080	COG1846	Transcriptional regulator
ILQ33_13085	COG1484	DNA-dependent DNA replication
ILQ33_13090	COG1846	Transcriptional regulator
ILQ33_13100	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ILQ33_13120	COG1403	HNH endonuclease
ILQ33_13125	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ33_13130	COG0484	heat shock protein binding
ILQ33_13165	COG3772	lysozyme
ILQ33_13200	COG0740	serine-type endopeptidase activity
ILQ33_13275	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_13305	COG0246	Mannitol dehydrogenase
ILQ33_13315	COG1802	Transcriptional regulator
ILQ33_13320	COG4221	oxidoreductase activity
ILQ33_13325	COG0339	signal peptide processing
ILQ33_13330	COG1546	Belongs to the CinA family
ILQ33_13335	COG3111	PFAM Bacterial OB fold (BOF) protein
ILQ33_13340	COG3706	GGDEF domain
ILQ33_13360	COG2814	Major facilitator Superfamily
ILQ33_13365	COG0697	spore germination
ILQ33_13375	COG4977	sequence-specific DNA binding
ILQ33_13380	COG1846	Transcriptional regulator
ILQ33_13385	COG2095	MarC family integral membrane protein
ILQ33_13390	COG2814	Major facilitator Superfamily
ILQ33_13400	COG0583	DNA-binding transcription factor activity
ILQ33_13405	COG1012	belongs to the aldehyde dehydrogenase family
ILQ33_13410	COG2066	Belongs to the glutaminase family
ILQ33_13420	COG2199	diguanylate cyclase activity
ILQ33_13430	COG3781	membrane
ILQ33_13445	COG1830	Aldolase
ILQ33_13455	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_13460	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_13465	COG1129	ABC transporter
ILQ33_13475	COG1070	Carbohydrate kinase
ILQ33_13480	COG2911	Protein conserved in bacteria
ILQ33_13480	COG3210	domain, Protein
ILQ33_13510	COG2207	Transcriptional regulator
ILQ33_13515	COG3119	arylsulfatase activity
ILQ33_13520	COG0641	radical SAM
ILQ33_13530	COG4178	(ABC) transporter
ILQ33_13535	COG4771	TonB-dependent receptor
ILQ33_13540	COG0612	Peptidase, M16
ILQ33_13545	COG0076	glutamate decarboxylase activity
ILQ33_13550	COG0531	amino acid
ILQ33_13555	COG1649	PFAM Uncharacterised BCR, COG1649
ILQ33_13565	COG3706	GGDEF domain
ILQ33_13575	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ILQ33_13580	COG0747	negative chemotaxis
ILQ33_13585	COG0601	transmembrane transport
ILQ33_13590	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ33_13595	COG0444	Belongs to the ABC transporter superfamily
ILQ33_13600	COG4608	Belongs to the ABC transporter superfamily
ILQ33_13605	COG1764	response to oxidative stress
ILQ33_13625	COG1064	alcohol dehydrogenase
ILQ33_13630	COG3093	addiction module antidote protein HigA
ILQ33_13635	COG2864	formate dehydrogenase
ILQ33_13640	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_13650	COG0697	spore germination
ILQ33_13665	COG4886	Leucine-rich repeat (LRR) protein
ILQ33_13670	COG4886	Leucine-rich repeat (LRR) protein
ILQ33_13675	COG2223	nitrite transmembrane transporter activity
ILQ33_13680	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ILQ33_13685	COG1140	nitrate reductase beta subunit
ILQ33_13690	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ILQ33_13695	COG2181	nitrate reductase activity
ILQ33_13700	COG0384	phenazine biosynthesis protein PhzF
ILQ33_13710	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ILQ33_13740	COG3209	COG3209 Rhs family protein
ILQ33_13755	COG0625	glutathione transferase activity
ILQ33_13760	COG1113	amino acid transport
ILQ33_13765	COG3391	amine dehydrogenase activity
ILQ33_13770	COG4772	TonB-dependent receptor
ILQ33_13775	COG1802	Transcriptional regulator
ILQ33_13780	COG2130	NADP-dependent
ILQ33_13785	COG1247	-acetyltransferase
ILQ33_13790	COG3238	Protein conserved in bacteria
ILQ33_13815	COG1177	transmembrane transport
ILQ33_13820	COG1176	ABC-type spermidine putrescine transport system, permease component I
ILQ33_13825	COG3842	ATPase activity
ILQ33_13830	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ILQ33_13835	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ILQ33_13840	COG1598	PFAM Uncharacterised protein family UPF0150
ILQ33_13845	COG1724	mRNA binding
ILQ33_13855	COG0826	peptidase U32
ILQ33_13860	COG1396	sequence-specific DNA binding
ILQ33_13865	COG3135	benzoate transporter
ILQ33_13875	COG0500	methyltransferase
ILQ33_13880	COG1275	C4-dicarboxylate transporter malic acid transport protein
ILQ33_13885	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ILQ33_13895	COG2841	Protein conserved in bacteria
ILQ33_13905	COG5383	Protein conserved in bacteria
ILQ33_13910	COG0583	DNA-binding transcription factor activity
ILQ33_13915	COG0840	transmembrane signaling receptor activity
ILQ33_13930	COG3038	cytochrome b561
ILQ33_13935	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ILQ33_13940	COG1012	belongs to the aldehyde dehydrogenase family
ILQ33_13945	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ILQ33_13970	COG1643	Atp-dependent helicase
ILQ33_13975	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ILQ33_13980	COG0671	phosphoesterase, PA-phosphatase related
ILQ33_13980	COG2453	phosphatase
ILQ33_13985	COG2267	carboxylic ester hydrolase activity
ILQ33_13990	COG4589	Belongs to the CDS family
ILQ33_13995	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ILQ33_14005	COG0667	Aldo Keto reductase
ILQ33_14020	COG3784	Protein of unknown function (DUF1318)
ILQ33_14030	COG2911	Protein conserved in bacteria
ILQ33_14035	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ILQ33_14040	COG3187	Heat shock protein
ILQ33_14045	COG3042	response to heat
ILQ33_14050	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ILQ33_14050	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ33_14050	COG1013	pyruvate-flavodoxin oxidoreductase activity
ILQ33_14050	COG0674	pyruvate-flavodoxin oxidoreductase activity
ILQ33_14060	COG0589	response to stress
ILQ33_14070	COG0513	Belongs to the DEAD box helicase family
ILQ33_14085	COG3706	GGDEF domain
ILQ33_14090	COG2840	Smr protein MutS2
ILQ33_14095	COG0583	DNA-binding transcription factor activity
ILQ33_14100	COG1473	amidohydrolase
ILQ33_14105	COG1473	amidohydrolase
ILQ33_14115	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ILQ33_14120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ33_14125	COG0589	response to stress
ILQ33_14130	COG3182	Iron-regulated membrane protein
ILQ33_14135	COG0668	transmembrane transport
ILQ33_14140	COG4166	transmembrane transport
ILQ33_14145	COG0583	DNA-binding transcription factor activity
ILQ33_14150	COG1073	alpha beta
ILQ33_14160	COG0702	epimerase
ILQ33_14165	COG2866	Carboxypeptidase
ILQ33_14170	COG4948	Mandelate Racemase Muconate Lactonizing
ILQ33_14175	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ILQ33_14180	COG3283	Transcriptional regulator of aromatic amino acids metabolism
ILQ33_14190	COG3106	COG3106 Predicted ATPase
ILQ33_14195	COG1609	Transcriptional regulator
ILQ33_14205	COG3842	ATPase activity
ILQ33_14210	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ33_14215	COG1554	hydrolase, family 65, central catalytic
ILQ33_14220	COG0673	inositol 2-dehydrogenase activity
ILQ33_14225	COG1082	Xylose isomerase domain protein TIM barrel
ILQ33_14230	COG1063	alcohol dehydrogenase
ILQ33_14235	COG0395	ABC-type sugar transport system, permease component
ILQ33_14240	COG1175	transmembrane transport
ILQ33_14255	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ILQ33_14265	COG1983	PspC domain protein
ILQ33_14275	COG1842	Phage shock protein A
ILQ33_14280	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
ILQ33_14285	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ILQ33_14290	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ILQ33_14295	COG1012	belongs to the aldehyde dehydrogenase family
ILQ33_14300	COG1396	sequence-specific DNA binding
ILQ33_14300	COG1917	Cupin 2, conserved barrel domain protein
ILQ33_14310	COG0174	glutamine synthetase
ILQ33_14320	COG0531	amino acid
ILQ33_14330	COG4166	transmembrane transport
ILQ33_14335	COG4168	peptide transport system, permease
ILQ33_14340	COG4171	peptide transport system, permease
ILQ33_14345	COG4172	Belongs to the ABC transporter superfamily
ILQ33_14350	COG4172	Belongs to the ABC transporter superfamily
ILQ33_14355	COG2814	Major facilitator Superfamily
ILQ33_14370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_14380	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ILQ33_14385	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ33_14385	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ33_14395	COG5001	Diguanylate cyclase
ILQ33_14405	COG1349	DNA-binding transcription factor activity
ILQ33_14415	COG0023	Translation Initiation Factor
ILQ33_14425	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ILQ33_14430	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
ILQ33_14435	COG0671	phosphoesterase, PA-phosphatase related
ILQ33_14445	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ILQ33_14465	COG0583	DNA-binding transcription factor activity
ILQ33_14470	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ILQ33_14480	COG0616	signal peptide processing
ILQ33_14485	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_14490	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
ILQ33_14495	COG1187	pseudouridine synthase activity
ILQ33_14500	COG4907	membrane protein (DUF2207)
ILQ33_14505	COG0009	L-threonylcarbamoyladenylate synthase
ILQ33_14510	COG0613	PHP domain protein
ILQ33_14520	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ILQ33_14525	COG0512	Glutamine amidotransferase of anthranilate synthase
ILQ33_14525	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ILQ33_14530	COG0134	indole-3-glycerol-phosphate synthase activity
ILQ33_14530	COG0135	phosphoribosylanthranilate isomerase activity
ILQ33_14545	COG3729	General stress protein
ILQ33_14550	COG3685	Protein conserved in bacteria
ILQ33_14555	COG3685	Protein conserved in bacteria
ILQ33_14605	COG3436	PFAM IS66 Orf2 family protein
ILQ33_14610	COG4372	Transposase
ILQ33_14655	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_14735	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ILQ33_14755	COG3299	homolog of phage Mu protein gp47
ILQ33_14765	COG4384	Bacteriophage Mu Gp45 protein
ILQ33_14785	COG4518	Phage tail assembly chaperone proteins, E, or 41 or 14
ILQ33_14795	COG4386	tail sheath protein
ILQ33_14820	COG4397	Mu-like prophage major head subunit gpT
ILQ33_14825	COG4388	Caudovirus prohead serine protease
ILQ33_14830	COG5005	Phage virion morphogenesis
ILQ33_14835	COG2369	cell adhesion
ILQ33_14840	COG4383	Mu-like prophage protein gp29
ILQ33_14845	COG4373	Mu-like prophage FluMu protein gp28
ILQ33_14885	COG5566	PFAM Mor transcription activator
ILQ33_14940	COG4396	Host-nuclease inhibitor protein Gam
ILQ33_14970	COG2842	Transposition protein
ILQ33_15075	COG3772	lysozyme
ILQ33_15125	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ33_15130	COG1403	HNH endonuclease
ILQ33_15165	COG1484	DNA-dependent DNA replication
ILQ33_15170	COG1846	Transcriptional regulator
ILQ33_15220	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ33_15230	COG0582	viral genome integration into host DNA
ILQ33_15235	COG3047	cAMP biosynthetic process
ILQ33_15255	COG1607	acyl-coa hydrolase
ILQ33_15260	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
ILQ33_15265	COG2350	Protein conserved in bacteria
ILQ33_15270	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ILQ33_15290	COG4608	Belongs to the ABC transporter superfamily
ILQ33_15295	COG0444	Belongs to the ABC transporter superfamily
ILQ33_15300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ33_15305	COG0601	transmembrane transport
ILQ33_15310	COG4166	transmembrane transport
ILQ33_15315	COG2095	MarC family integral membrane protein
ILQ33_15320	COG1454	alcohol dehydrogenase
ILQ33_15320	COG1012	belongs to the aldehyde dehydrogenase family
ILQ33_15325	COG1435	thymidine kinase activity
ILQ33_15335	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ILQ33_15340	COG0745	RESPONSE REGULATOR receiver
ILQ33_15345	COG1752	Esterase of the alpha-beta hydrolase superfamily
ILQ33_15355	COG0788	formyltetrahydrofolate deformylase activity
ILQ33_15385	COG2181	nitrate reductase activity
ILQ33_15390	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ILQ33_15395	COG1140	nitrate reductase beta subunit
ILQ33_15400	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ILQ33_15405	COG2223	nitrite transmembrane transporter activity
ILQ33_15410	COG3850	Histidine kinase
ILQ33_15415	COG2197	response regulator
ILQ33_15420	COG4932	domain protein
ILQ33_15425	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ILQ33_15430	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
ILQ33_15435	COG4572	Cation transport regulator
ILQ33_15440	COG0387	Pfam Sodium calcium exchanger
ILQ33_15460	COG2912	Transglutaminase-like superfamily
ILQ33_15465	COG3094	Invasion gene expression up-regulator, SirB
ILQ33_15495	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ILQ33_15500	COG0659	secondary active sulfate transmembrane transporter activity
ILQ33_15515	COG0012	GTP binding
ILQ33_15525	COG2376	Dihydroxyacetone kinase
ILQ33_15530	COG1461	Dihydroxyacetone kinase
ILQ33_15535	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_15535	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
ILQ33_15535	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ33_15545	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ILQ33_15550	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ33_15555	COG1120	ATPase activity
ILQ33_15565	COG0157	Belongs to the NadC ModD family
ILQ33_15600	COG1619	proteins homologs of microcin C7 resistance protein MccF
ILQ33_15615	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ILQ33_15625	COG2719	SpoVR family
ILQ33_15640	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ILQ33_15645	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ILQ33_15650	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ILQ33_15665	COG0179	Fumarylacetoacetate (FAA) hydrolase
ILQ33_15695	COG2894	cell division
ILQ33_15720	COG4571	Outer membrane protease
ILQ33_15730	COG4372	Transposase
ILQ33_15735	COG3436	PFAM IS66 Orf2 family protein
ILQ33_15750	COG0500	methyltransferase
ILQ33_15755	COG3729	General stress protein
ILQ33_15760	COG3685	Protein conserved in bacteria
ILQ33_15765	COG3685	Protein conserved in bacteria
ILQ33_15770	COG3546	catalase activity
ILQ33_15775	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ33_15780	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_15815	COG1196	nuclear chromosome segregation
ILQ33_15865	COG1030	water channel activity
ILQ33_15885	COG4220	transposase activity
ILQ33_15900	COG5562	phage envelope protein
ILQ33_15935	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ33_15955	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ILQ33_15965	COG2076	Multidrug Resistance protein
ILQ33_15990	COG0582	viral genome integration into host DNA
ILQ33_15995	COG0538	isocitrate dehydrogenase activity
ILQ33_16000	COG1187	pseudouridine synthase activity
ILQ33_16010	COG0482	sulfurtransferase activity
ILQ33_16020	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ILQ33_16025	COG0745	RESPONSE REGULATOR receiver
ILQ33_16030	COG2205	protein histidine kinase activity
ILQ33_16040	COG4220	transposase activity
ILQ33_16130	COG2850	peptidyl-arginine hydroxylation
ILQ33_16140	COG3842	ATPase activity
ILQ33_16330	COG3772	lysozyme
ILQ33_16370	COG0484	heat shock protein binding
ILQ33_16375	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ33_16380	COG1403	HNH endonuclease
ILQ33_16435	COG1846	Transcriptional regulator
ILQ33_16455	COG4197	protein conserved in bacteria, prophage-related
ILQ33_16485	COG0582	viral genome integration into host DNA
ILQ33_16490	COG1177	transmembrane transport
ILQ33_16495	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ILQ33_16500	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ILQ33_16510	COG4591	ABC-type transport system involved in lipoprotein release permease component
ILQ33_16515	COG1136	(ABC) transporter
ILQ33_16520	COG4591	ABC-type transport system involved in lipoprotein release permease component
ILQ33_16525	COG4763	Acyl-transferase
ILQ33_16530	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ILQ33_16535	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ33_16535	COG1388	LysM domain
ILQ33_16545	COG1309	transcriptional regulator
ILQ33_16550	COG3134	Outer membrane lipoprotein
ILQ33_16555	COG1252	NADH dehydrogenase
ILQ33_16570	COG0510	thiamine kinase activity
ILQ33_16575	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
ILQ33_16580	COG5633	Lipoprotein
ILQ33_16585	COG0537	adenosine 5'-monophosphoramidase activity
ILQ33_16595	COG4773	Receptor
ILQ33_16600	COG1263	PTS System
ILQ33_16600	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_16605	COG0084	hydrolase, TatD family'
ILQ33_16610	COG0470	DNA polymerase III
ILQ33_16620	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ILQ33_16625	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ILQ33_16630	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ33_16640	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_16645	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ILQ33_16665	COG1399	metal-binding, possibly nucleic acid-binding protein
ILQ33_16670	COG0424	maF-like protein
ILQ33_16675	COG0564	pseudouridine synthase activity
ILQ33_16680	COG1530	ribonuclease E activity
ILQ33_16685	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ILQ33_16690	COG1256	bacterial-type flagellum assembly
ILQ33_16695	COG1705	Flagellar rod assembly protein muramidase FlgJ
ILQ33_16695	COG3951	Flagellar rod assembly protein muramidase FlgJ
ILQ33_16710	COG4786	Flagellar basal body rod
ILQ33_16715	COG4787	bacterial-type flagellum-dependent cell motility
ILQ33_16720	COG1749	Flagellar hook protein flgE
ILQ33_16725	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ILQ33_16730	COG1558	bacterial-type flagellum-dependent cell motility
ILQ33_16735	COG1815	bacterial-type flagellum-dependent cell motility
ILQ33_16740	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
ILQ33_16745	COG2747	anti-sigma28 factor FlgM
ILQ33_16750	COG3418	PFAM FlgN family protein
ILQ33_16755	COG0728	peptidoglycan biosynthetic process
ILQ33_16760	COG0673	inositol 2-dehydrogenase activity
ILQ33_16770	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ILQ33_16780	COG2999	glutathione oxidoreductase activity
ILQ33_16815	COG3038	cytochrome b561
ILQ33_16820	COG2353	YceI-like domain
ILQ33_16830	COG1560	Kdo2-lipid A biosynthetic process
ILQ33_16845	COG5645	(Lipo)protein
ILQ33_16850	COG2943	transferase activity, transferring hexosyl groups
ILQ33_16865	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ILQ33_16870	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ33_16895	COG2197	response regulator
ILQ33_16910	COG1462	curli production assembly transport component CsgG
ILQ33_16920	COG3381	protein complex oligomerization
ILQ33_16970	COG2003	Belongs to the UPF0758 family
ILQ33_17000	COG3468	outer membrane autotransporter barrel domain protein
ILQ33_17040	COG1475	DNA binding
ILQ33_17045	COG3969	phosphoadenosine phosphosulfate
ILQ33_17050	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
ILQ33_17060	COG2831	hemolysin activation secretion protein
ILQ33_17145	COG4771	TonB-dependent receptor
ILQ33_17205	COG1358	cellular component organization or biogenesis
ILQ33_17240	COG4372	Transposase
ILQ33_17245	COG3436	PFAM IS66 Orf2 family protein
ILQ33_17275	COG0254	rRNA binding
ILQ33_17320	COG0829	nickel cation binding
ILQ33_17330	COG2194	sulfuric ester hydrolase activity
ILQ33_17335	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ILQ33_17370	COG3436	PFAM IS66 Orf2 family protein
ILQ33_17375	COG4372	Transposase
ILQ33_17400	COG4983	Phage plasmid primase, P4 family domain protein
ILQ33_17425	COG0582	viral genome integration into host DNA
ILQ33_17475	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ33_17480	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ILQ33_17490	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ILQ33_17500	COG0736	holo-[acyl-carrier-protein] synthase activity
ILQ33_17505	COG2831	hemolysin activation secretion protein
ILQ33_17510	COG3210	domain, Protein
ILQ33_17520	COG3539	Fimbrial protein
ILQ33_17530	COG3188	usher protein
ILQ33_17540	COG3121	Chaperone
ILQ33_17545	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_17550	COG3710	Transcriptional regulator
ILQ33_17560	COG2200	EAL domain
ILQ33_17565	COG3706	GGDEF domain
ILQ33_17570	COG0457	Tetratricopeptide repeat
ILQ33_17575	COG0726	polysaccharide deacetylase
ILQ33_17575	COG1649	PFAM Uncharacterised BCR, COG1649
ILQ33_17580	COG1215	transferase activity, transferring glycosyl groups
ILQ33_17585	COG3658	cytochrome
ILQ33_17590	COG1702	phosphate starvation-inducible protein PhoH
ILQ33_17595	COG2837	iron assimilation
ILQ33_17600	COG2822	iron ion transport
ILQ33_17615	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ILQ33_17625	COG0506	proline dehydrogenase activity
ILQ33_17625	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ33_17625	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ33_17630	COG1309	transcriptional regulator
ILQ33_17665	COG2233	PERMEase
ILQ33_17670	COG3729	General stress protein
ILQ33_17710	COG0243	molybdopterin cofactor binding
ILQ33_17715	COG3005	denitrification pathway
ILQ33_17720	COG0745	RESPONSE REGULATOR receiver
ILQ33_17725	COG1879	ABC-type sugar transport system periplasmic component
ILQ33_17730	COG0784	Response regulator, receiver
ILQ33_17730	COG2205	protein histidine kinase activity
ILQ33_17730	COG2198	Histidine kinase
ILQ33_17735	COG0348	domain, Protein
ILQ33_17755	COG1278	Cold shock
ILQ33_17760	COG1278	Cold shock
ILQ33_17780	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ33_17785	COG1596	polysaccharide export
ILQ33_17790	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ILQ33_17795	COG3206	protein involved in exopolysaccharide biosynthesis
ILQ33_17795	COG0489	protein tyrosine kinase activity
ILQ33_17810	COG1294	oxidase, subunit
ILQ33_17815	COG1271	oxidase subunit
ILQ33_17820	COG1773	rubredoxin
ILQ33_17825	COG1999	signal sequence binding
ILQ33_17830	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ILQ33_17835	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
ILQ33_17840	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
ILQ33_17845	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ILQ33_17865	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_17880	COG2032	superoxide dismutase activity
ILQ33_17960	COG4372	Transposase
ILQ33_17965	COG3436	PFAM IS66 Orf2 family protein
ILQ33_17990	COG3772	lysozyme
ILQ33_18030	COG2207	Transcriptional regulator
ILQ33_18050	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ33_18055	COG1403	HNH endonuclease
ILQ33_18080	COG1846	Transcriptional regulator
ILQ33_18085	COG1484	DNA-dependent DNA replication
ILQ33_18150	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ33_18165	COG0670	Belongs to the BI1 family
ILQ33_18170	COG2920	part of a sulfur-relay system
ILQ33_18175	COG1254	Belongs to the acylphosphatase family
ILQ33_18190	COG1832	CoA-binding protein
ILQ33_18205	COG0210	DNA helicase
ILQ33_18210	COG3304	Inner membrane component domain
ILQ33_18215	COG1289	transmembrane transporter activity
ILQ33_18220	COG3070	regulator of competence-specific genes
ILQ33_18230	COG2885	chlorophyll binding
ILQ33_18230	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ILQ33_18240	COG1067	ATP-dependent peptidase activity
ILQ33_18250	COG3130	regulation of translation
ILQ33_18255	COG3009	Protein conserved in bacteria
ILQ33_18260	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ILQ33_18260	COG3008	intermembrane lipid transfer
ILQ33_18265	COG2995	paraquat-inducible protein a
ILQ33_18270	COG0488	(ABC) transporter
ILQ33_18280	COG0633	Ferredoxin
ILQ33_18280	COG3217	Mosc domain protein beta barrel domain protein
ILQ33_18300	COG3539	Fimbrial protein
ILQ33_18305	COG3539	Fimbrial protein
ILQ33_18310	COG3539	Fimbrial protein
ILQ33_18320	COG3121	Chaperone
ILQ33_18325	COG3539	Fimbrial protein
ILQ33_18330	COG0431	NADPH-dependent FMN reductase
ILQ33_18335	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ILQ33_18345	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ILQ33_18350	COG1116	anion transmembrane transporter activity
ILQ33_18355	COG0308	aminopeptidase N
ILQ33_18365	COG0017	Asparaginyl-tRNA synthetase
ILQ33_18375	COG1448	Aminotransferase
ILQ33_18380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ILQ33_18385	COG3108	Peptidase M15
ILQ33_18390	COG2989	Protein conserved in bacteria
ILQ33_18400	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
ILQ33_18410	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ILQ33_18415	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ILQ33_18420	COG3173	Aminoglycoside phosphotransferase
ILQ33_18435	COG3214	Protein conserved in bacteria
ILQ33_18445	COG1132	(ABC) transporter
ILQ33_18450	COG2333	competence protein COMEC
ILQ33_18450	COG0658	competence protein
ILQ33_18460	COG0539	negative regulation of cytoplasmic translation
ILQ33_18470	COG0501	Belongs to the peptidase M48B family
ILQ33_18485	COG2323	membrane
ILQ33_18490	COG1944	ATP diphosphatase activity
ILQ33_18495	COG2116	formate transmembrane transporter activity
ILQ33_18500	COG1882	Formate acetyltransferase
ILQ33_18505	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ33_18515	COG0531	amino acid
ILQ33_18525	COG1335	isochorismatase
ILQ33_18530	COG3302	dmso reductase anchor subunit
ILQ33_18535	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_18540	COG0243	molybdopterin cofactor binding
ILQ33_18550	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ILQ33_18560	COG1674	ftsk spoiiie
ILQ33_18560	COG1178	ABC-type Fe3 transport system permease component
ILQ33_18565	COG1522	sequence-specific DNA binding
ILQ33_18570	COG0492	ferredoxin-NADP+ reductase activity
ILQ33_18575	COG4988	ABC transporter
ILQ33_18580	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ILQ33_18600	COG0542	response to heat
ILQ33_18610	COG1278	Cold shock
ILQ33_18615	COG0577	efflux transmembrane transporter activity
ILQ33_18615	COG1136	(ABC) transporter
ILQ33_18620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_18625	COG2990	Protein conserved in bacteria
ILQ33_18630	COG3593	DNA synthesis involved in DNA repair
ILQ33_18635	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ILQ33_18640	COG2431	L-lysine efflux transmembrane transporter activity
ILQ33_18650	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ33_18655	COG0028	Belongs to the TPP enzyme family
ILQ33_18660	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
ILQ33_18665	COG0702	epimerase
ILQ33_18670	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ33_18675	COG3023	N-Acetylmuramoyl-L-alanine amidase
ILQ33_18695	COG1126	abc transporter atp-binding protein
ILQ33_18700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_18705	COG4215	(ABC) transporter
ILQ33_18710	COG4160	amino acid transport
ILQ33_18715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_18745	COG1177	transmembrane transport
ILQ33_18750	COG1176	ABC-type spermidine putrescine transport system, permease component I
ILQ33_18755	COG3842	ATPase activity
ILQ33_18760	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ILQ33_18775	COG0778	Nitroreductase
ILQ33_18785	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ILQ33_18800	COG3226	Transcriptional regulator
ILQ33_18805	COG0738	Major facilitator superfamily
ILQ33_18810	COG0561	phosphatase activity
ILQ33_18820	COG2814	Major facilitator Superfamily
ILQ33_18825	COG0671	phosphoesterase, PA-phosphatase related
ILQ33_18830	COG1349	DNA-binding transcription factor activity
ILQ33_18835	COG1686	Belongs to the peptidase S11 family
ILQ33_18840	COG0625	glutathione transferase activity
ILQ33_18845	COG2133	pyrroloquinoline quinone binding
ILQ33_18870	COG2199	diguanylate cyclase activity
ILQ33_18875	COG2200	EAL domain
ILQ33_18885	COG0601	transmembrane transport
ILQ33_18890	COG0747	negative chemotaxis
ILQ33_18895	COG4172	Belongs to the ABC transporter superfamily
ILQ33_18905	COG0303	'Molybdopterin
ILQ33_18910	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ILQ33_18915	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ33_18920	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ33_18930	COG0561	phosphatase activity
ILQ33_18940	COG0488	(ABC) transporter
ILQ33_18945	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ33_18950	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ILQ33_18955	COG1321	iron dependent repressor
ILQ33_18965	COG2194	sulfuric ester hydrolase activity
ILQ33_18970	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ILQ33_18980	COG5006	permease, DMT superfamily
ILQ33_18990	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_18995	COG0765	amino acid transport
ILQ33_19000	COG1126	abc transporter atp-binding protein
ILQ33_19005	COG0668	transmembrane transport
ILQ33_19020	COG4774	siderophore transport
ILQ33_19030	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ILQ33_19040	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ILQ33_19045	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ILQ33_19050	COG1199	ATP-dependent helicase activity
ILQ33_19060	COG0513	Belongs to the DEAD box helicase family
ILQ33_19065	COG1309	transcriptional regulator
ILQ33_19075	COG1131	(ABC) transporter
ILQ33_19080	COG0842	Transport permease protein
ILQ33_19085	COG0842	Transport permease protein
ILQ33_19095	COG3568	Endonuclease Exonuclease Phosphatase
ILQ33_19100	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ILQ33_19105	COG0392	lysyltransferase activity
ILQ33_19110	COG0670	Belongs to the BI1 family
ILQ33_19115	COG0670	Belongs to the BI1 family
ILQ33_19120	COG0314	molybdopterin synthase activity
ILQ33_19125	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ILQ33_19135	COG0521	Mo-molybdopterin cofactor biosynthetic process
ILQ33_19145	COG0391	Required for morphogenesis under gluconeogenic growth conditions
ILQ33_19155	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ILQ33_19160	COG2226	methyltransferase
ILQ33_19175	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ILQ33_19180	COG1881	PFAM PEBP family protein
ILQ33_19225	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_19300	COG0740	serine-type endopeptidase activity
ILQ33_19340	COG3772	lysozyme
ILQ33_19450	COG0582	viral genome integration into host DNA
ILQ33_19455	COG4677	pectinesterase activity
ILQ33_19460	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ILQ33_19465	COG0471	metal ion transport
ILQ33_19475	COG2828	Protein conserved in bacteria
ILQ33_19480	COG0583	DNA-binding transcription factor activity
ILQ33_19490	COG0561	phosphatase activity
ILQ33_19500	COG4149	molybdate abc transporter
ILQ33_19505	COG0725	ABC transporter, periplasmic molybdate-binding protein
ILQ33_19515	COG3585	molybdate ion transport
ILQ33_19515	COG2005	Transcriptional regulator
ILQ33_19520	COG1119	ATPase activity
ILQ33_19525	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ILQ33_19530	COG1085	galactose-1-phosphate uridylyltransferase
ILQ33_19540	COG2017	converts alpha-aldose to the beta-anomer
ILQ33_19550	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ILQ33_19560	COG1230	cation diffusion facilitator family transporter
ILQ33_19565	COG3201	nicotinamide mononucleotide transporter
ILQ33_19570	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ILQ33_19605	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
ILQ33_19610	COG2885	chlorophyll binding
ILQ33_19620	COG3064	Membrane
ILQ33_19625	COG0848	biopolymer transport protein
ILQ33_19630	COG0811	peptide transport
ILQ33_19635	COG0824	Thioesterase
ILQ33_19640	COG3790	cyd operon protein YbgE
ILQ33_19645	COG4890	Cyd operon protein YbgT
ILQ33_19650	COG1294	oxidase, subunit
ILQ33_19655	COG1271	oxidase subunit
ILQ33_19670	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ILQ33_19680	COG4865	methylaspartate mutase activity
ILQ33_19685	COG3799	methylaspartate ammonia-lyase activity
ILQ33_19700	COG1301	dicarboxylic acid transport
ILQ33_19705	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_19705	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_19710	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
ILQ33_19715	COG0583	DNA-binding transcription factor activity
ILQ33_19720	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ33_19730	COG0508	dehydrogenase complex catalyzes the overall conversion of
ILQ33_19735	COG0567	Dehydrogenase, E1 component
ILQ33_19740	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ILQ33_19745	COG1053	succinate dehydrogenase
ILQ33_19750	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ILQ33_19755	COG2009	succinate dehydrogenase
ILQ33_19765	COG0372	Belongs to the citrate synthase family
ILQ33_19770	COG3539	Fimbrial protein
ILQ33_19775	COG3188	usher protein
ILQ33_19780	COG3121	Chaperone
ILQ33_19785	COG3539	Fimbrial protein
ILQ33_19790	COG3180	Ammonia monooxygenase
ILQ33_19795	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ILQ33_19805	COG1984	allophanate hydrolase subunit 2
ILQ33_19810	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ILQ33_19815	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ILQ33_19820	COG3104	oligopeptide transport
ILQ33_19825	COG0415	Belongs to the DNA photolyase family
ILQ33_19830	COG3272	Protein of unknown function (DUF1722)
ILQ33_19850	COG3209	COG3209 Rhs family protein
ILQ33_19880	COG2205	protein histidine kinase activity
ILQ33_19885	COG0745	RESPONSE REGULATOR receiver
ILQ33_19895	COG1982	Orn Lys Arg decarboxylase major
ILQ33_19900	COG0531	amino acid
ILQ33_19905	COG0033	Phosphoglucomutase
ILQ33_19910	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
ILQ33_19915	COG0596	Alpha beta hydrolase
ILQ33_19925	COG0716	FMN binding
ILQ33_19935	COG0735	belongs to the Fur family
ILQ33_19955	COG2190	(PTS) system
ILQ33_19955	COG1263	PTS System
ILQ33_19955	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_19965	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ILQ33_19970	COG1940	carbohydrate kinase activity
ILQ33_19970	COG1846	Transcriptional regulator
ILQ33_19975	COG0647	UMP catabolic process
ILQ33_19980	COG0367	asparagine synthase
ILQ33_20020	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ33_20030	COG1702	phosphate starvation-inducible protein PhoH
ILQ33_20040	COG4535	Mg2 and Co2 transporter CorC
ILQ33_20045	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ILQ33_20050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ33_20055	COG0765	amino acid transport
ILQ33_20060	COG0765	amino acid transport
ILQ33_20065	COG1126	abc transporter atp-binding protein
ILQ33_20075	COG0443	Heat shock 70 kDa protein
ILQ33_20090	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ILQ33_20095	COG2214	Heat shock protein DnaJ domain protein
ILQ33_20110	COG2888	peptidyl-tyrosine sulfation
ILQ33_20125	COG1466	dna polymerase III delta subunit
ILQ33_20135	COG0406	alpha-ribazole phosphatase activity
ILQ33_20140	COG0799	negative regulation of ribosome biogenesis
ILQ33_20150	COG0768	penicillin binding
ILQ33_20155	COG0772	Belongs to the SEDS family
ILQ33_20160	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ILQ33_20165	COG1686	Belongs to the peptidase S11 family
ILQ33_20180	COG0583	DNA-binding transcription factor activity
ILQ33_20190	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ILQ33_20195	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ILQ33_20215	COG3069	C4-dicarboxylate transmembrane transporter activity
ILQ33_20220	COG4565	transcriptional regulatory protein
ILQ33_20225	COG3290	protein histidine kinase activity
ILQ33_20230	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
ILQ33_20240	COG2301	Belongs to the HpcH HpaI aldolase family
ILQ33_20245	COG3051	citrate lyase alpha subunit
ILQ33_20255	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ILQ33_20260	COG0471	metal ion transport
ILQ33_20265	COG3719	Belongs to the RNase T2 family
ILQ33_20270	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ILQ33_20275	COG1063	alcohol dehydrogenase
ILQ33_20280	COG0589	response to stress
ILQ33_20285	COG3634	alkyl hydroperoxide reductase activity
ILQ33_20290	COG0450	alkyl hydroperoxide reductase
ILQ33_20295	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ILQ33_20300	COG0583	DNA-binding transcription factor activity
ILQ33_20305	COG3969	phosphoadenosine phosphosulfate
ILQ33_20310	COG1475	DNA binding
ILQ33_20315	COG0436	Aminotransferase
ILQ33_20320	COG0371	Dehydrogenase
ILQ33_20325	COG2879	small protein
ILQ33_20330	COG1966	Carbon starvation protein
ILQ33_20340	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_20345	COG1535	isochorismatase
ILQ33_20345	COG3433	isochorismatase activity
ILQ33_20350	COG1021	2,3-dihydroxybenzoate-AMP ligase
ILQ33_20355	COG1169	isochorismate synthase
ILQ33_20360	COG4592	Periplasmic binding protein
ILQ33_20370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ33_20375	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ33_20380	COG1120	ATPase activity
ILQ33_20385	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
ILQ33_20390	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
ILQ33_20390	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ILQ33_20395	COG3251	PFAM MbtH domain protein
ILQ33_20400	COG2382	esterase
ILQ33_20405	COG4771	TonB-dependent receptor
ILQ33_20410	COG2977	Belongs to the P-Pant transferase superfamily
ILQ33_20435	COG2315	Protein conserved in bacteria
ILQ33_20440	COG0778	Nitroreductase
ILQ33_20445	COG0668	transmembrane transport
ILQ33_20450	COG1113	amino acid transport
ILQ33_20455	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ33_20460	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_20465	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_20470	COG1538	Outer membrane efflux protein
ILQ33_20475	COG0745	RESPONSE REGULATOR receiver
ILQ33_20480	COG5002	protein histidine kinase activity
ILQ33_20495	COG3209	COG3209 Rhs family protein
ILQ33_20495	COG4104	PAAR repeat-containing protein
ILQ33_20505	COG4104	PAAR repeat-containing protein
ILQ33_20505	COG3209	COG3209 Rhs family protein
ILQ33_20515	COG5433	transposase activity
ILQ33_20520	COG1215	transferase activity, transferring glycosyl groups
ILQ33_20525	COG4783	chaperone-mediated protein folding
ILQ33_20535	COG2207	Transcriptional regulator
ILQ33_20545	COG2197	response regulator
ILQ33_20550	COG3539	Fimbrial protein
ILQ33_20555	COG3539	Fimbrial protein
ILQ33_20560	COG3188	usher protein
ILQ33_20565	COG3121	Chaperone
ILQ33_20570	COG3539	Fimbrial protein
ILQ33_20580	COG2501	S4 domain
ILQ33_20585	COG1988	membrane-bound metal-dependent
ILQ33_20595	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ILQ33_20605	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ILQ33_20610	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ILQ33_20615	COG0549	Belongs to the carbamate kinase family
ILQ33_20625	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ33_20630	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ33_20635	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ILQ33_20640	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ILQ33_20645	COG3257	ureidoglycine aminohydrolase activity
ILQ33_20650	COG1929	Belongs to the glycerate kinase type-1 family
ILQ33_20655	COG2233	PERMEase
ILQ33_20665	COG1953	Uracil, thiamine, allantoin
ILQ33_20670	COG2084	Dehydrogenase
ILQ33_20675	COG3622	Belongs to the hyi family
ILQ33_20680	COG3960	tartronate-semialdehyde synthase activity
ILQ33_20685	COG1414	Transcriptional regulator
ILQ33_20695	COG0583	DNA-binding transcription factor activity
ILQ33_20715	COG3209	COG3209 Rhs family protein
ILQ33_20720	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ILQ33_20725	COG4181	ATPase activity
ILQ33_20730	COG2755	lipolytic protein G-D-S-L family
ILQ33_20735	COG0300	oxidoreductase activity
ILQ33_20740	COG3118	belongs to the thioredoxin family
ILQ33_20745	COG0390	transport system, permease component
ILQ33_20750	COG4619	ABC transporter
ILQ33_20755	COG0330	HflC and HflK could
ILQ33_20760	COG1585	Membrane protein implicated in regulation of membrane protease activity
ILQ33_20780	COG0789	Transcriptional regulator
ILQ33_20815	COG0531	amino acid
ILQ33_20820	COG2066	Belongs to the glutaminase family
ILQ33_20825	COG2217	Heavy metal translocating P-type atpase
ILQ33_20830	COG3093	addiction module antidote protein HigA
ILQ33_20835	COG3735	TraB family
ILQ33_20840	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ILQ33_20845	COG0737	Belongs to the 5'-nucleotidase family
ILQ33_20850	COG2223	nitrite transmembrane transporter activity
ILQ33_20855	COG4651	solute:proton antiporter activity
ILQ33_20855	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ILQ33_20860	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_20895	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ILQ33_20905	COG2832	Protein of unknown function (DUF454)
ILQ33_20910	COG3923	Primosomal replication protein n
ILQ33_20920	COG3264	Mechanosensitive ion channel
ILQ33_20920	COG1196	nuclear chromosome segregation
ILQ33_20925	COG1309	transcriptional regulator
ILQ33_20930	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ33_20935	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ33_20950	COG0110	maltose O-acetyltransferase activity
ILQ33_20960	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ILQ33_20965	COG5507	3-demethylubiquinone-9 3-methyltransferase
ILQ33_20975	COG3695	enzyme binding
ILQ33_20980	COG3126	Type III secretion system lipoprotein chaperone (YscW)
ILQ33_20985	COG1946	Acyl-CoA thioesterase
ILQ33_20990	COG0004	ammonium transporteR
ILQ33_20995	COG0347	Belongs to the P(II) protein family
ILQ33_21000	COG1132	(ABC) transporter
ILQ33_21005	COG1132	(ABC) transporter
ILQ33_21010	COG1522	sequence-specific DNA binding
ILQ33_21020	COG4533	DNA binding
ILQ33_21030	COG0824	Thioesterase
ILQ33_21035	COG1555	photosystem II stabilization
ILQ33_21040	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ILQ33_21045	COG0776	regulation of translation
ILQ33_21050	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ILQ33_21070	COG0271	Belongs to the BolA IbaG family
ILQ33_21075	COG3056	Lipoprotein
ILQ33_21080	COG2223	nitrite transmembrane transporter activity
ILQ33_21085	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ILQ33_21090	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ILQ33_21095	COG1845	cytochrome c oxidase, subunit III
ILQ33_21100	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ILQ33_21110	COG2814	Major facilitator Superfamily
ILQ33_21120	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ILQ33_21125	COG0693	protein deglycase activity
ILQ33_21140	COG0142	geranyltranstransferase activity
ILQ33_21150	COG0667	Aldo Keto reductase
ILQ33_21160	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ILQ33_21165	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ILQ33_21180	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ILQ33_21180	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ILQ33_21190	COG4238	major outer membrane lipoprotein
ILQ33_21195	COG3248	Nucleoside-binding outer membrane protein
ILQ33_21200	COG1403	HNH endonuclease
ILQ33_21210	COG3609	addiction module antidote protein, CC2985 family
ILQ33_21215	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ILQ33_21220	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ILQ33_21225	COG1862	Preprotein translocase
ILQ33_21250	COG0366	Alpha amylase catalytic
ILQ33_21255	COG1113	amino acid transport
ILQ33_21260	COG1114	Component of the transport system for branched-chain amino acids
ILQ33_21265	COG5002	protein histidine kinase activity
ILQ33_21270	COG0745	RESPONSE REGULATOR receiver
ILQ33_21275	COG0420	3'-5' exonuclease activity
ILQ33_21280	COG0419	ATPase involved in DNA repair
ILQ33_21285	COG2814	Major facilitator Superfamily
ILQ33_21290	COG1940	carbohydrate kinase activity
ILQ33_21315	COG4126	flavin adenine dinucleotide binding
ILQ33_21335	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ILQ33_21340	COG3706	GGDEF domain
ILQ33_21350	COG1785	Belongs to the alkaline phosphatase family
ILQ33_21365	COG1181	Belongs to the D-alanine--D-alanine ligase family
ILQ33_21385	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ILQ33_21390	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ILQ33_21395	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ33_21400	COG3468	outer membrane autotransporter barrel domain protein
ILQ33_21405	COG0113	porphobilinogen synthase activity
ILQ33_21410	COG2175	clavaminate synthase activity
ILQ33_21415	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ILQ33_21420	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ILQ33_21425	COG4521	taurine ABC transporter
ILQ33_21440	COG2271	Major facilitator Superfamily
ILQ33_21445	COG1840	ABC-type Fe3 transport system, periplasmic component
ILQ33_21455	COG3842	ATPase activity
ILQ33_21470	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ILQ33_21475	COG3122	Protein conserved in bacteria
ILQ33_21480	COG2814	Major facilitator Superfamily
ILQ33_21485	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ILQ33_21500	COG0596	Alpha beta hydrolase
ILQ33_21515	COG1414	Transcriptional regulator
ILQ33_21520	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ILQ33_21530	COG1609	Transcriptional regulator
ILQ33_21535	COG3250	beta-galactosidase activity
ILQ33_21540	COG2223	nitrite transmembrane transporter activity
ILQ33_21545	COG0110	maltose O-acetyltransferase activity
ILQ33_21550	COG2807	transmembrane transport
ILQ33_21560	COG0288	reversible hydration of carbon dioxide
ILQ33_21565	COG0583	DNA-binding transcription factor activity
ILQ33_21570	COG0402	S-adenosylhomocysteine deaminase activity
ILQ33_21575	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ILQ33_21580	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ILQ33_21585	COG2079	MmgE PrpD family protein
ILQ33_21590	COG0372	Belongs to the citrate synthase family
ILQ33_21595	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ILQ33_21600	COG3829	transcription factor binding
ILQ33_21610	COG1280	lysine exporter protein (LysE YggA)
ILQ33_21625	COG1064	alcohol dehydrogenase
ILQ33_21635	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_21645	COG1879	ABC-type sugar transport system periplasmic component
ILQ33_21655	COG0402	S-adenosylhomocysteine deaminase activity
ILQ33_21660	COG0549	Belongs to the carbamate kinase family
ILQ33_21670	COG1304	FMN binding
ILQ33_21675	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ33_21685	COG0666	response to abiotic stimulus
ILQ33_21700	COG2200	EAL domain
ILQ33_21700	COG2771	luxR family
ILQ33_21710	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ILQ33_21765	COG1556	Lactate utilization protein
ILQ33_21770	COG1139	Iron-sulfur cluster binding protein
ILQ33_21775	COG0247	lactate metabolic process
ILQ33_21780	COG2207	Transcriptional regulator
ILQ33_21785	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ILQ33_21795	COG3059	membrane
ILQ33_21800	COG0656	L-ascorbic acid biosynthetic process
ILQ33_21805	COG2207	Transcriptional regulator
ILQ33_21805	COG3708	Transcriptional regulator
ILQ33_21810	COG1388	LysM domain
ILQ33_21825	COG0583	DNA-binding transcription factor activity
ILQ33_21830	COG1073	alpha beta
ILQ33_21835	COG1902	pentaerythritol trinitrate reductase activity
ILQ33_21845	COG4372	Transposase
ILQ33_21850	COG3436	PFAM IS66 Orf2 family protein
ILQ33_21890	COG3188	usher protein
ILQ33_21900	COG3121	Chaperone
ILQ33_21905	COG0727	PFAM Uncharacterised protein family (UPF0153)
ILQ33_21910	COG3477	response to acidic pH
ILQ33_21915	COG2080	2 iron, 2 sulfur cluster binding
ILQ33_21920	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ILQ33_21925	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ILQ33_21930	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ILQ33_21945	COG0583	DNA-binding transcription factor activity
ILQ33_21955	COG4221	oxidoreductase activity
ILQ33_21960	COG0583	DNA-binding transcription factor activity
ILQ33_22040	COG0582	viral genome integration into host DNA
ILQ33_22060	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ILQ33_22075	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ33_22145	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ILQ33_22165	COG2195	Cleaves the N-terminal amino acid of tripeptides
ILQ33_22180	COG0454	-acetyltransferase
ILQ33_22190	COG2161	toxin-antitoxin pair type II binding
ILQ33_22195	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ILQ33_22215	COG0791	NLP P60 protein
ILQ33_22220	COG3077	Addiction module antitoxin, RelB DinJ family
ILQ33_22225	COG3041	Addiction module toxin RelE StbE family
ILQ33_22230	COG3034	peptidoglycan biosynthetic process
ILQ33_22235	COG0121	glutamine amidotransferase
ILQ33_22245	COG1960	acyl-CoA dehydrogenase activity
ILQ33_22255	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ILQ33_22260	COG5433	transposase activity
ILQ33_22280	COG5433	transposase activity
ILQ33_22300	COG3209	COG3209 Rhs family protein
ILQ33_22420	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ33_22430	COG2226	methyltransferase
ILQ33_22440	COG0741	lytic transglycosylase activity
ILQ33_22440	COG1388	LysM domain
ILQ33_22445	COG2226	methyltransferase
ILQ33_22455	COG0583	DNA-binding transcription factor activity
ILQ33_22460	COG0656	L-ascorbic acid biosynthetic process
ILQ33_22495	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ILQ33_22500	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ILQ33_22505	COG2011	ABC-type metal ion transport system permease component
ILQ33_22510	COG1464	Belongs to the NlpA lipoprotein family
ILQ33_22520	COG1720	tRNA m6t6A37 methyltransferase activity
ILQ33_22530	COG0791	NLP P60 protein
ILQ33_22535	COG3015	lipoprotein NlpE involved in copper resistance
ILQ33_22540	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ILQ33_22545	COG4681	YaeQ
ILQ33_22555	COG4568	rho-dependent transcription termination
ILQ33_22560	COG0037	tRNA processing
ILQ33_22565	COG0346	lactoylglutathione lyase activity
ILQ33_22570	COG1982	Orn Lys Arg decarboxylase major
ILQ33_22580	COG0587	DNA-directed DNA polymerase activity
ILQ33_22605	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ILQ33_22610	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
ILQ33_22620	COG0750	zinc metalloprotease
ILQ33_22625	COG0575	Belongs to the CDS family
ILQ33_22630	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ILQ33_22635	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ILQ33_22660	COG0024	Methionine aminopeptidase
ILQ33_22680	COG3835	regulator
ILQ33_22685	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ILQ33_22700	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ILQ33_22705	COG2860	membrane
ILQ33_22730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ33_22735	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ILQ33_22740	COG1120	ATPase activity
ILQ33_22745	COG4774	siderophore transport
ILQ33_22750	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ILQ33_22755	COG1643	Atp-dependent helicase
ILQ33_22760	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
ILQ33_22770	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ILQ33_22775	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ILQ33_22780	COG0617	tRNA 3'-terminal CCA addition
ILQ33_22785	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ILQ33_22795	COG3121	Chaperone
ILQ33_22800	COG3188	usher protein
ILQ33_22805	COG3539	Fimbrial protein
ILQ33_22810	COG3539	Fimbrial protein
ILQ33_22835	COG5464	transposase or invertase
ILQ33_22845	COG0726	polysaccharide deacetylase
ILQ33_22850	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_22855	COG0842	Transport permease protein
ILQ33_22860	COG1131	(ABC) transporter
ILQ33_22865	COG0288	reversible hydration of carbon dioxide
ILQ33_22870	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ILQ33_22875	COG4993	Dehydrogenase
ILQ33_22880	COG2132	Multicopper oxidase
ILQ33_22905	COG1049	propionate catabolic process, 2-methylcitrate cycle
ILQ33_22910	COG3064	Membrane
ILQ33_22915	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ILQ33_22920	COG0508	dehydrogenase complex catalyzes the overall conversion of
ILQ33_22925	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ILQ33_22930	COG2186	Transcriptional regulator
ILQ33_22935	COG1113	amino acid transport
ILQ33_22940	COG3725	Membrane protein required for beta-lactamase induction
ILQ33_22945	COG3023	N-Acetylmuramoyl-L-alanine amidase
ILQ33_22950	COG0157	Belongs to the NadC ModD family
ILQ33_22955	COG4969	Belongs to the N-Me-Phe pilin family
ILQ33_22960	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ILQ33_22965	COG1459	type II secretion system
ILQ33_22980	COG0237	dephospho-CoA kinase activity
ILQ33_22995	COG0494	nUDIX hydrolase
ILQ33_23015	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ILQ33_23020	COG0849	cell division
ILQ33_23025	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ILQ33_23030	COG1181	Belongs to the D-alanine--D-alanine ligase family
ILQ33_23045	COG0772	Belongs to the SEDS family
ILQ33_23050	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ILQ33_23060	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ILQ33_23065	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ILQ33_23070	COG0768	penicillin binding
ILQ33_23075	COG3116	cell division
ILQ33_23090	COG1609	Transcriptional regulator
ILQ33_23100	COG0440	acetolactate synthase activity
ILQ33_23105	COG0028	Belongs to the TPP enzyme family
ILQ33_23110	COG0583	DNA-binding transcription factor activity
ILQ33_23125	COG0473	3-isopropylmalate dehydrogenase activity
ILQ33_23145	COG4533	DNA binding
ILQ33_23155	COG4143	(ABC) transporter
ILQ33_23160	COG1178	ABC-type Fe3 transport system permease component
ILQ33_23165	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
ILQ33_23170	COG0586	Pfam SNARE associated Golgi protein
ILQ33_23175	COG4977	sequence-specific DNA binding
ILQ33_23190	COG0235	Class ii aldolase
ILQ33_23195	COG0417	DNA replication proofreading
ILQ33_23205	COG0564	pseudouridine synthase activity
ILQ33_23215	COG1357	PFAM Pentapeptide repeats (8 copies)
ILQ33_23220	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ILQ33_23225	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ILQ33_23230	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ILQ33_23265	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ILQ33_23280	COG2271	Major facilitator Superfamily
ILQ33_23285	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ILQ33_23290	COG0644	oxidoreductase
ILQ33_23325	COG1024	Enoyl-CoA hydratase
ILQ33_23340	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ILQ33_23345	COG0505	Belongs to the CarA family
ILQ33_23365	COG1047	Peptidyl-prolyl cis-trans
ILQ33_23380	COG0196	riboflavin kinase activity
ILQ33_23405	COG3121	Chaperone
ILQ33_23410	COG3188	usher protein
ILQ33_23420	COG0583	DNA-binding transcription factor activity
ILQ33_23450	COG4735	regulation of single-species biofilm formation
ILQ33_23455	COG1584	GPR1 FUN34 yaaH family protein
ILQ33_23460	COG0521	Mo-molybdopterin cofactor biosynthetic process
ILQ33_23465	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ33_23470	COG1115	amino acid carrier protein
ILQ33_23485	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ILQ33_23495	COG0460	homoserine dehydrogenase
ILQ33_23495	COG0527	aspartate kinase activity
ILQ33_23505	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
ILQ33_23515	COG0745	RESPONSE REGULATOR receiver
ILQ33_23520	COG4452	Inner membrane protein CreD
ILQ33_23525	COG2205	protein histidine kinase activity
ILQ33_23530	COG0745	RESPONSE REGULATOR receiver
ILQ33_23535	COG3045	CreA protein
ILQ33_23540	COG3708	Transcriptional regulator
ILQ33_23540	COG2207	Transcriptional regulator
ILQ33_23550	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
ILQ33_23560	COG0741	lytic transglycosylase activity
ILQ33_23565	COG0488	(ABC) transporter
ILQ33_23575	COG1056	cytidyltransferase-related domain
ILQ33_23575	COG3172	ATPase kinase involved in NAD metabolism
ILQ33_23580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ILQ33_23585	COG0560	Phosphoserine phosphatase
ILQ33_23595	COG0095	Lipoate-protein ligase
ILQ33_23595	COG3726	membrane protein affecting hemolysin expression
ILQ33_23630	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ33_23635	COG0084	hydrolase, TatD family'
ILQ33_23640	COG4667	esterase of the alpha-beta hydrolase superfamily
ILQ33_23650	COG2823	Periplasmic or secreted lipoprotein
ILQ33_23660	COG1011	Hydrolase
ILQ33_23665	COG0456	acetyltransferase
ILQ33_23670	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
ILQ33_23690	COG4114	ferric iron reductase
ILQ33_23695	COG2197	response regulator
ILQ33_23700	COG2197	response regulator
ILQ33_23705	COG2966	Psort location CytoplasmicMembrane, score
ILQ33_23720	COG1484	DNA-dependent DNA replication
ILQ33_23735	COG1063	alcohol dehydrogenase
ILQ33_23740	COG1802	Transcriptional regulator
ILQ33_23745	COG2271	Major facilitator Superfamily
ILQ33_23750	COG0840	transmembrane signaling receptor activity
ILQ33_23760	COG1966	Carbon starvation protein
ILQ33_23765	COG2879	small protein
ILQ33_23770	COG0523	cobalamin synthesis protein
ILQ33_23795	COG0732	type I restriction modification DNA specificity domain
ILQ33_23815	COG5457	Domain of unknown function (DUF1127)
ILQ33_23820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ILQ33_23835	COG2814	Major facilitator Superfamily
ILQ33_23840	COG2733	membrane
ILQ33_23845	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
ILQ33_23850	COG1924	4 iron, 4 sulfur cluster binding
ILQ33_23865	COG3204	pilus organization
ILQ33_23870	COG0477	Major facilitator Superfamily
ILQ33_23885	COG3366	ferrous iron transmembrane transporter activity
ILQ33_23890	COG0700	Nucleoside recognition
ILQ33_23895	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ILQ33_23920	COG2186	Transcriptional regulator
ILQ33_23925	COG0246	Mannitol dehydrogenase
ILQ33_23935	COG2610	gluconate transmembrane transporter activity
ILQ33_23940	COG3539	Fimbrial protein
ILQ33_23945	COG3539	Fimbrial protein
ILQ33_23950	COG3539	Fimbrial protein
ILQ33_23965	COG3436	PFAM IS66 Orf2 family protein
ILQ33_23970	COG4372	Transposase
ILQ33_23975	COG3121	Chaperone
ILQ33_23980	COG3539	Fimbrial protein
ILQ33_23985	COG3539	Fimbrial protein
ILQ33_23990	COG4974	Belongs to the 'phage' integrase family
ILQ33_23995	COG0582	viral genome integration into host DNA
ILQ33_24000	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ILQ33_24005	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
ILQ33_24020	COG0210	DNA helicase
ILQ33_24025	COG1205	dead DEAH box helicase
ILQ33_24025	COG1111	helicase
ILQ33_24035	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ILQ33_24130	COG1064	alcohol dehydrogenase
ILQ33_24135	COG0433	COG0433 Predicted ATPase
ILQ33_24140	COG0795	lipopolysaccharide-transporting ATPase activity
ILQ33_24145	COG0795	lipopolysaccharide-transporting ATPase activity
ILQ33_24155	COG2927	DNA polymerase III (CHI subunit)
ILQ33_24165	COG4269	membrane
ILQ33_24170	COG0456	acetyltransferase
ILQ33_24175	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
ILQ33_24180	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ILQ33_24190	COG2731	YhcH YjgK YiaL family protein
ILQ33_24195	COG1309	transcriptional regulator
ILQ33_24200	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ33_24205	COG0251	oxidation-reduction process
ILQ33_24225	COG0251	oxidation-reduction process
ILQ33_24230	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ILQ33_24240	COG1609	Transcriptional regulator
ILQ33_24245	COG1263	PTS System
ILQ33_24245	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ33_24250	COG0366	Alpha amylase catalytic
ILQ33_24255	COG1328	CTP reductase activity
ILQ33_24260	COG0602	queuosine metabolic process
ILQ33_24265	COG3783	Cytochrome b(562)
ILQ33_24270	COG0312	modulator of DNA gyrase
ILQ33_24280	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ILQ33_24290	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_24295	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_24300	COG1129	ABC transporter
ILQ33_24305	COG1879	ABC-type sugar transport system periplasmic component
ILQ33_24310	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ILQ33_24315	COG2337	Toxic component of a toxin-antitoxin (TA) module
ILQ33_24320	COG2336	PFAM SpoVT AbrB
ILQ33_24325	COG2105	PFAM AIG2 family protein
ILQ33_24330	COG2911	Protein conserved in bacteria
ILQ33_24335	COG0729	surface antigen
ILQ33_24345	COG1253	flavin adenine dinucleotide binding
ILQ33_24355	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
ILQ33_24365	COG1218	3'(2'),5'-bisphosphate nucleotidase
ILQ33_24370	COG0737	Belongs to the 5'-nucleotidase family
ILQ33_24375	COG1733	regulation of RNA biosynthetic process
ILQ33_24380	COG0702	epimerase
ILQ33_24385	COG0697	spore germination
ILQ33_24395	COG1113	amino acid transport
ILQ33_24400	COG0545	Peptidyl-prolyl cis-trans isomerase
ILQ33_24405	COG3061	Opacity-associated protein A
ILQ33_24415	COG0675	Transposase, IS605 OrfB family
ILQ33_24440	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ILQ33_24475	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_24480	COG3414	Phosphotransferase system galactitol-specific IIB component
ILQ33_24485	COG3037	sugar-specific permease SgaT UlaA
ILQ33_24500	COG1073	alpha beta
ILQ33_24505	COG3650	response to hydrogen peroxide
ILQ33_24515	COG1960	acyl-CoA dehydrogenase activity
ILQ33_24520	COG0754	glutathionylspermidine amidase activity
ILQ33_24525	COG5463	Belongs to the UPF0441 family
ILQ33_24530	COG3766	membrane
ILQ33_24540	COG1842	Phage shock protein A
ILQ33_24545	COG3789	protein conserved in bacteria
ILQ33_24550	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ILQ33_24555	COG0557	exoribonuclease II activity
ILQ33_24570	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
ILQ33_24575	COG0330	HflC and HflK could
ILQ33_24580	COG0330	HflC and HflK could
ILQ33_24585	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ILQ33_24605	COG0860	N-Acetylmuramoyl-L-alanine amidase
ILQ33_24610	COG0802	atpase or kinase
ILQ33_24615	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ILQ33_24615	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ILQ33_24645	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ILQ33_24660	COG3264	Mechanosensitive ion channel
ILQ33_24660	COG1511	domain protein
ILQ33_24665	COG0531	amino acid
ILQ33_24675	COG1053	succinate dehydrogenase
ILQ33_24680	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ILQ33_24695	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ILQ33_24700	COG3040	lipid binding
ILQ33_24705	COG2076	Multidrug Resistance protein
ILQ33_24710	COG5510	response to toxic substance
ILQ33_24715	COG5510	response to toxic substance
ILQ33_24725	COG1509	lysine 2,3-aminomutase activity
ILQ33_24750	COG0531	amino acid
ILQ33_24755	COG3030	protein affecting phage T7 exclusion by the F plasmid
ILQ33_24760	COG1027	Aspartate ammonia-lyase
ILQ33_24765	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ILQ33_24775	COG4232	protein-disulfide reductase activity
ILQ33_24780	COG1309	transcriptional regulator
ILQ33_24790	COG3710	Transcriptional regulator
ILQ33_24795	COG0531	amino acid
ILQ33_24800	COG1982	Orn Lys Arg decarboxylase major
ILQ33_24805	COG3104	oligopeptide transport
ILQ33_24810	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ILQ33_24825	COG2388	GCN5-related N-acetyl-transferase
ILQ33_24830	COG3592	Divergent 4Fe-4S mono-cluster
ILQ33_24835	COG3290	protein histidine kinase activity
ILQ33_24840	COG4565	transcriptional regulatory protein
ILQ33_24845	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ILQ33_24850	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_24850	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ33_24855	COG3647	Membrane
ILQ33_24860	COG2211	Major facilitator Superfamily
ILQ33_24865	COG1486	melibiose metabolic process
ILQ33_24870	COG2169	Transcriptional regulator
ILQ33_24875	COG1982	Orn Lys Arg decarboxylase major
ILQ33_24880	COG2207	Transcriptional regulator
ILQ33_24885	COG0531	amino acid
ILQ33_24890	COG2194	sulfuric ester hydrolase activity
ILQ33_24895	COG0745	RESPONSE REGULATOR receiver
ILQ33_24900	COG0642	Histidine kinase
ILQ33_24910	COG0477	Major facilitator Superfamily
ILQ33_24920	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ILQ33_24925	COG2824	Alkylphosphonate utilization operon protein PhnA
ILQ33_24930	COG2764	glyoxalase bleomycin resistance protein dioxygenase
ILQ33_24935	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ILQ33_24940	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
ILQ33_24945	COG3639	organic phosphonate transmembrane transporter activity
ILQ33_24950	COG2188	Transcriptional regulator
ILQ33_24955	COG3624	Phosphonate C-P lyase system protein PhnG
ILQ33_24960	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
ILQ33_24965	COG3626	phosphonate metabolism
ILQ33_24970	COG3627	carbon phosphorus lyase activity
ILQ33_24975	COG4107	phosphonate C-P lyase system protein PhnK
ILQ33_24980	COG4778	phosphonate C-P lyase system protein PhnL
ILQ33_24985	COG3454	Phosphonate metabolism
ILQ33_24990	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
ILQ33_24995	COG0456	acetyltransferase
ILQ33_25000	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ILQ33_25015	COG1129	ABC transporter
ILQ33_25020	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_25040	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_25050	COG2015	COG2015, Alkyl sulfatase and related hydrolases
ILQ33_25060	COG1566	PFAM secretion protein HlyD family protein
ILQ33_25065	COG1289	transmembrane transporter activity
ILQ33_25070	COG1538	Outer membrane efflux protein
ILQ33_25080	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ILQ33_25085	COG1301	dicarboxylic acid transport
ILQ33_25090	COG4235	cytochrome complex assembly
ILQ33_25095	COG3088	subunit of a heme lyase
ILQ33_25100	COG1138	Cytochrome C-type biogenesis protein
ILQ33_25105	COG3301	Polysulphide reductase, NrfD
ILQ33_25110	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_25115	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
ILQ33_25125	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ILQ33_25130	COG3162	membrane
ILQ33_25140	COG1357	PFAM Pentapeptide repeats (8 copies)
ILQ33_25145	COG0025	NhaP-type Na H and K H
ILQ33_25150	COG2252	PERMEase
ILQ33_25155	COG0789	Transcriptional regulator
ILQ33_25160	COG2207	Transcriptional regulator
ILQ33_25165	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ILQ33_25175	COG0629	single-stranded DNA binding
ILQ33_25180	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ILQ33_25185	COG2315	Protein conserved in bacteria
ILQ33_25190	COG0432	Pfam Uncharacterised protein family UPF0047
ILQ33_25195	COG3700	Belongs to the class B bacterial acid phosphatase family
ILQ33_25205	COG1448	Aminotransferase
ILQ33_25210	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ILQ33_25215	COG0305	Participates in initiation and elongation during chromosome replication
ILQ33_25220	COG0604	alcohol dehydrogenase
ILQ33_25230	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ33_25270	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ33_25290	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
ILQ33_25330	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ33_25340	COG0735	belongs to the Fur family
ILQ33_25345	COG3237	CsbD-like
ILQ33_25350	COG0534	Mate efflux family protein
ILQ33_25360	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ILQ33_25380	COG1357	PFAM Pentapeptide repeats (8 copies)
ILQ33_25395	COG3842	ATPase activity
ILQ33_25400	COG2182	Extracellular solute-binding protein
ILQ33_25405	COG1175	transmembrane transport
ILQ33_25410	COG3833	ABC-type maltose transport systems, permease component
ILQ33_25415	COG0477	Major facilitator Superfamily
ILQ33_25415	COG2814	Major facilitator Superfamily
ILQ33_25435	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ33_25460	COG0527	aspartate kinase activity
ILQ33_25470	COG1187	pseudouridine synthase activity
ILQ33_25515	COG1283	sodium-dependent phosphate transmembrane transporter activity
ILQ33_25520	COG0646	methionine synthase
ILQ33_25520	COG1410	methionine synthase
ILQ33_25525	COG1414	Transcriptional regulator
ILQ33_25540	COG2224	Isocitrate lyase
ILQ33_25545	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ILQ33_25555	COG0456	acetyltransferase
ILQ33_25585	COG0151	Belongs to the GarS family
ILQ33_25590	COG2204	response regulator
ILQ33_25595	COG4191	Histidine kinase
ILQ33_25600	COG3678	ATP-independent chaperone mediated protein folding
ILQ33_25615	COG3068	Protein conserved in bacteria
ILQ33_25650	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ILQ33_25655	COG2104	thiamine diphosphate biosynthetic process
ILQ33_25660	COG2022	thiamine diphosphate biosynthetic process
ILQ33_25665	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ILQ33_25705	COG0250	Participates in transcription elongation, termination and antitermination
ILQ33_25710	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ILQ33_25745	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ILQ33_25745	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ILQ33_25750	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ILQ33_25775	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ILQ33_25780	COG4206	TonB-dependent receptor
ILQ33_25785	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ILQ33_25795	COG1309	transcriptional regulator
ILQ33_25800	COG0477	Major facilitator Superfamily
ILQ33_25805	COG1473	amidohydrolase
ILQ33_25815	COG0583	DNA-binding transcription factor activity
ILQ33_25830	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ILQ33_25845	COG2194	sulfuric ester hydrolase activity
ILQ33_25850	COG2207	Transcriptional regulator
ILQ33_25855	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_25860	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ33_25865	COG1882	Formate acetyltransferase
ILQ33_25870	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_25875	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_25880	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_25880	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_25880	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ33_25885	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ33_25890	COG0371	Dehydrogenase
ILQ33_25895	COG3738	Protein conserved in bacteria
ILQ33_25900	COG0697	spore germination
ILQ33_25910	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ILQ33_25915	COG0527	aspartate kinase activity
ILQ33_25915	COG0460	homoserine dehydrogenase
ILQ33_25920	COG0626	cystathionine gamma-synthase activity
ILQ33_25930	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
ILQ33_25945	COG3209	COG3209 Rhs family protein
ILQ33_25955	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ILQ33_25960	COG1609	Transcriptional regulator
ILQ33_25965	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ILQ33_25980	COG1575	Belongs to the MenA family. Type 1 subfamily
ILQ33_26005	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ILQ33_26015	COG1494	fructose-1,6-bisphosphatase
ILQ33_26025	COG0589	response to stress
ILQ33_26030	COG3691	Protein conserved in bacteria
ILQ33_26035	COG3152	Membrane
ILQ33_26055	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ILQ33_26070	COG3678	ATP-independent chaperone mediated protein folding
ILQ33_26075	COG0745	RESPONSE REGULATOR receiver
ILQ33_26080	COG2205	protein histidine kinase activity
ILQ33_26085	COG2258	MOSC domain
ILQ33_26095	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ILQ33_26105	COG4977	sequence-specific DNA binding
ILQ33_26105	COG1917	Cupin 2, conserved barrel domain protein
ILQ33_26140	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_26145	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_26145	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ33_26150	COG1363	Peptidase, m42
ILQ33_26155	COG3711	transcriptional antiterminator
ILQ33_26155	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ33_26175	COG0437	4 iron, 4 sulfur cluster binding
ILQ33_26180	COG2864	formate dehydrogenase
ILQ33_26190	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ33_26195	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ33_26210	COG0456	acetyltransferase
ILQ33_26225	COG1011	Hydrolase
ILQ33_26230	COG1349	DNA-binding transcription factor activity
ILQ33_26235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_26240	COG2084	Dehydrogenase
ILQ33_26245	COG3684	Belongs to the aldolase LacD family
ILQ33_26250	COG2942	2-epimerase
ILQ33_26255	COG2017	converts alpha-aldose to the beta-anomer
ILQ33_26265	COG1501	Belongs to the glycosyl hydrolase 31 family
ILQ33_26270	COG2211	Major facilitator Superfamily
ILQ33_26275	COG2211	Major facilitator Superfamily
ILQ33_26280	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ILQ33_26285	COG2271	Major facilitator Superfamily
ILQ33_26290	COG1082	Xylose isomerase domain protein TIM barrel
ILQ33_26295	COG2188	Transcriptional regulator
ILQ33_26300	COG1217	gtp-binding protein TYPA
ILQ33_26305	COG0174	glutamine synthetase
ILQ33_26310	COG3852	Histidine kinase
ILQ33_26315	COG2204	response regulator
ILQ33_26325	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ILQ33_26330	COG3078	GTPase activator activity
ILQ33_26340	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ILQ33_26340	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ILQ33_26350	COG5339	Protein conserved in bacteria
ILQ33_26355	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ILQ33_26360	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ILQ33_26365	COG3084	Protein conserved in bacteria
ILQ33_26370	COG0746	molybdenum cofactor guanylyltransferase activity
ILQ33_26375	COG1763	Mo-molybdopterin cofactor biosynthetic process
ILQ33_26405	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
ILQ33_26410	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ILQ33_26415	COG1739	Uncharacterized protein family UPF0029
ILQ33_26430	COG0183	Belongs to the thiolase family
ILQ33_26435	COG0543	2 iron, 2 sulfur cluster binding
ILQ33_26440	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ILQ33_26445	COG0250	Participates in transcription elongation, termination and antitermination
ILQ33_26450	COG0084	hydrolase, TatD family'
ILQ33_26455	COG0805	protein transport
ILQ33_26460	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ILQ33_26465	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ILQ33_26475	COG3165	ubiquinone biosynthetic process from chorismate
ILQ33_26485	COG1322	Protein conserved in bacteria
ILQ33_26490	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
ILQ33_26495	COG0412	Dienelactone hydrolase
ILQ33_26505	COG0583	DNA-binding transcription factor activity
ILQ33_26510	COG0697	spore germination
ILQ33_26515	COG0561	phosphatase activity
ILQ33_26520	COG2267	carboxylic ester hydrolase activity
ILQ33_26525	COG1280	lysine exporter protein (LysE YggA)
ILQ33_26530	COG1280	lysine exporter protein (LysE YggA)
ILQ33_26535	COG0514	ATP-dependent DNA helicase (RecQ)
ILQ33_26540	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
ILQ33_26545	COG2050	protein possibly involved in aromatic compounds catabolism
ILQ33_26550	COG2962	Rard protein
ILQ33_26575	COG0598	Magnesium transport protein CorA
ILQ33_26580	COG3698	Phosphodiester glycosidase
ILQ33_26585	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
ILQ33_26590	COG0210	DNA helicase
ILQ33_26595	COG1011	Hydrolase
ILQ33_26605	COG3159	Protein conserved in bacteria
ILQ33_26615	COG5567	small periplasmic lipoprotein
ILQ33_26630	COG3072	Adenylate cyclase
ILQ33_26640	COG1587	Uroporphyrinogen-III synthase
ILQ33_26645	COG2959	enzyme of heme biosynthesis
ILQ33_26650	COG3071	HemY protein
ILQ33_26655	COG3119	arylsulfatase activity
ILQ33_26660	COG0641	radical SAM
ILQ33_26690	COG1113	amino acid transport
ILQ33_26710	COG2244	polysaccharide biosynthetic process
ILQ33_26715	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ILQ33_26720	COG0456	acetyltransferase
ILQ33_26725	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ILQ33_26730	COG1088	dTDP-glucose 4,6-dehydratase activity
ILQ33_26735	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ILQ33_26740	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ILQ33_26745	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
ILQ33_26750	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ILQ33_26755	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ILQ33_26765	COG3118	belongs to the thioredoxin family
ILQ33_26780	COG0210	DNA helicase
ILQ33_26785	COG3692	DNA binding
ILQ33_26790	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ILQ33_26800	COG0583	DNA-binding transcription factor activity
ILQ33_26805	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ILQ33_26815	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ILQ33_26820	COG3978	acetolactate synthase activity
ILQ33_26840	COG0606	chelatase, subunit chli
ILQ33_26845	COG3085	chromosome segregation
ILQ33_26885	COG2186	Transcriptional regulator
ILQ33_26890	COG0477	Major facilitator Superfamily
ILQ33_26895	COG1609	Transcriptional regulator
ILQ33_26900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ33_26905	COG1879	ABC-type sugar transport system periplasmic component
ILQ33_26910	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ33_26915	COG1129	ABC transporter
ILQ33_26925	COG3158	transport of potassium into the cell
ILQ33_26945	COG1522	sequence-specific DNA binding
ILQ33_26950	COG0716	FMN binding
ILQ33_27015	COG3468	outer membrane autotransporter barrel domain protein
ILQ33_27025	COG3436	PFAM IS66 Orf2 family protein
ILQ33_27030	COG4372	Transposase
ILQ33_27040	COG0726	polysaccharide deacetylase
ILQ33_27045	COG0297	glycogen (starch) synthase activity
ILQ33_27050	COG2194	sulfuric ester hydrolase activity
ILQ33_27055	COG1560	Kdo2-lipid A biosynthetic process
ILQ33_27075	COG3436	PFAM IS66 Orf2 family protein
ILQ33_27080	COG4372	Transposase
ILQ33_27100	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ILQ33_27170	COG2274	protein secretion by the type I secretion system
ILQ33_27335	COG1475	DNA binding
ILQ33_27420	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
ILQ33_27430	COG1525	nuclease