locus-tag class description ILQ34_00005 PF13932 GidA associated domain ILQ34_00005 PF01134 Glucose inhibited division protein A ILQ34_00010 PF02527 rRNA small subunit methyltransferase G ILQ34_00015 PF03899 ATP synthase I chain ILQ34_00020 PF00119 ATP synthase A chain ILQ34_00025 PF00137 ATP synthase subunit C ILQ34_00030 PF00430 ATP synthase B/B' CF(0) ILQ34_00035 PF00213 ATP synthase delta (OSCP) subunit ILQ34_00040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ34_00040 PF00306 ATP synthase alpha/beta chain, C terminal domain ILQ34_00040 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILQ34_00045 PF00231 ATP synthase ILQ34_00050 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILQ34_00050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ34_00055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ILQ34_00055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ILQ34_00060 PF14602 Hexapeptide repeat of succinyl-transferase ILQ34_00060 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_00060 PF12804 MobA-like NTP transferase domain ILQ34_00065 PF01380 SIS domain ILQ34_00070 PF00419 Fimbrial protein ILQ34_00075 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_00075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_00085 PF00577 Outer membrane usher protein ILQ34_00085 PF13954 PapC N-terminal domain ILQ34_00085 PF13953 PapC C-terminal domain ILQ34_00090 PF00419 Fimbrial protein ILQ34_00095 PF00419 Fimbrial protein ILQ34_00100 PF12849 PBP superfamily domain ILQ34_00105 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_00110 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_00115 PF00005 ABC transporter ILQ34_00120 PF01895 PhoU domain ILQ34_00145 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_00150 PF00860 Permease family ILQ34_00155 PF03358 NADPH-dependent FMN reductase ILQ34_00165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_00165 PF03466 LysR substrate binding domain ILQ34_00170 PF07690 Major Facilitator Superfamily ILQ34_00175 PF03222 Tryptophan/tyrosine permease family ILQ34_00180 PF01212 Beta-eliminating lyase ILQ34_00185 PF08053 Tryptophanase operon leader peptide ILQ34_00195 PF10396 GTP-binding protein TrmE N-terminus ILQ34_00195 PF01926 50S ribosome-binding GTPase ILQ34_00195 PF12631 MnmE helical domain ILQ34_00200 PF14849 YidC periplasmic domain ILQ34_00200 PF02096 60Kd inner membrane protein ILQ34_00205 PF01809 Putative membrane protein insertion efficiency factor ILQ34_00210 PF00825 Ribonuclease P ILQ34_00215 PF00468 Ribosomal protein L34 ILQ34_00225 PF11638 DnaA N-terminal domain ILQ34_00225 PF00308 Bacterial dnaA protein ILQ34_00225 PF08299 Bacterial dnaA protein helix-turn-helix ILQ34_00230 PF02767 DNA polymerase III beta subunit, central domain ILQ34_00230 PF00712 DNA polymerase III beta subunit, N-terminal domain ILQ34_00230 PF02768 DNA polymerase III beta subunit, C-terminal domain ILQ34_00235 PF02463 RecF/RecN/SMC N terminal domain ILQ34_00240 PF00204 DNA gyrase B ILQ34_00240 PF00986 DNA gyrase B subunit, carboxyl terminus ILQ34_00240 PF01751 Toprim domain ILQ34_00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_00240 PF18053 DNA gyrase B subunit insert domain ILQ34_00245 PF06078 Bacterial protein of unknown function (DUF937) ILQ34_00260 PF01494 FAD binding domain ILQ34_00265 PF07676 WD40-like Beta Propeller Repeat ILQ34_00265 PF12566 Protein of unknown function (DUF3748) ILQ34_00270 PF07119 Protein of unknown function (DUF1375) ILQ34_00275 PF00011 Hsp20/alpha crystallin family ILQ34_00280 PF00011 Hsp20/alpha crystallin family ILQ34_00285 PF06826 Predicted Permease Membrane Region ILQ34_00285 PF02080 TrkA-C domain ILQ34_00290 PF07702 UTRA domain ILQ34_00290 PF00392 Bacterial regulatory proteins, gntR family ILQ34_00295 PF00367 phosphotransferase system, EIIB ILQ34_00295 PF02378 Phosphotransferase system, EIIC ILQ34_00300 PF02056 Family 4 glycosyl hydrolase ILQ34_00300 PF11975 Family 4 glycosyl hydrolase C-terminal domain ILQ34_00305 PF12833 Helix-turn-helix domain ILQ34_00305 PF02311 AraC-like ligand binding domain ILQ34_00310 PF00474 Sodium:solute symporter family ILQ34_00315 PF16347 Domain of unknown function (DUF4976) ILQ34_00315 PF00884 Sulfatase ILQ34_00325 PF02656 Domain of unknown function (DUF202) ILQ34_00330 PF02656 Domain of unknown function (DUF202) ILQ34_00340 PF07690 Major Facilitator Superfamily ILQ34_00345 PF13939 Toxin TisB, type I toxin-antitoxin system ILQ34_00350 PF08049 IlvB leader peptide ILQ34_00355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ34_00355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_00355 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ34_00360 PF01842 ACT domain ILQ34_00380 PF00072 Response regulator receiver domain ILQ34_00380 PF00196 Bacterial regulatory proteins, luxR family ILQ34_00385 PF05231 MASE1 ILQ34_00385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_00385 PF07730 Histidine kinase ILQ34_00390 PF07690 Major Facilitator Superfamily ILQ34_00395 PF07690 Major Facilitator Superfamily ILQ34_00400 PF01979 Amidohydrolase family ILQ34_00400 PF13382 Adenine deaminase C-terminal domain ILQ34_00410 PF06711 Protein of unknown function (DUF1198) ILQ34_00425 PF07690 Major Facilitator Superfamily ILQ34_00435 PF03180 NLPA lipoprotein ILQ34_00440 PF00892 EamA-like transporter family ILQ34_00445 PF07690 Major Facilitator Superfamily ILQ34_00495 PF00813 FliP family ILQ34_00500 PF01313 Bacterial export proteins, family 3 ILQ34_00505 PF01311 Bacterial export proteins, family 1 ILQ34_00510 PF01312 FlhB HrpN YscU SpaS Family ILQ34_00515 PF01464 Transglycosylase SLT domain ILQ34_00535 PF00263 Bacterial type II and III secretion system protein ILQ34_00535 PF03958 Bacterial type II/III secretion system short domain ILQ34_00545 PF01514 Secretory protein of YscJ/FliF family ILQ34_00565 PF00771 FHIPEP family ILQ34_00570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ34_00570 PF18269 T3SS EscN ATPase C-terminal domain ILQ34_00605 PF07489 Translocated intimin receptor (Tir) C-terminus ILQ34_00605 PF03549 Translocated intimin receptor (Tir) intimin-binding domain ILQ34_00605 PF07490 Translocated intimin receptor (Tir) N-terminus ILQ34_00610 PF05932 Tir chaperone protein (CesT) family ILQ34_00615 PF01476 LysM domain ILQ34_00615 PF07979 Intimin C-type lectin domain ILQ34_00615 PF11924 Inverse autotransporter, beta-domain ILQ34_00615 PF02368 Bacterial Ig-like domain (group 2) ILQ34_00615 PF02369 Bacterial Ig-like domain (group 1) ILQ34_00625 PF07201 HrpJ-like domain ILQ34_00640 PF05802 Enterobacterial EspB protein ILQ34_00670 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_00670 PF13007 Transposase C of IS166 homeodomain ILQ34_00670 PF03050 Transposase IS66 family ILQ34_00670 PF13817 IS66 C-terminal element ILQ34_00675 PF05717 IS66 Orf2 like protein ILQ34_00690 PF17345 Family of unknown function (DUF5375) ILQ34_00740 PF13356 Arm DNA-binding domain ILQ34_00740 PF00589 Phage integrase family ILQ34_00740 PF14659 Phage integrase, N-terminal SAM-like domain ILQ34_00755 PF01055 Glycosyl hydrolases family 31 ILQ34_00755 PF13802 Galactose mutarotase-like ILQ34_00760 PF05170 AsmA family ILQ34_00765 PF00860 Permease family ILQ34_00770 PF03616 Sodium/glutamate symporter ILQ34_00780 PF00270 DEAD/DEAH box helicase ILQ34_00780 PF00271 Helicase conserved C-terminal domain ILQ34_00780 PF17191 RecG wedge domain ILQ34_00785 PF12105 SpoU, rRNA methylase, C-terminal ILQ34_00785 PF00588 SpoU rRNA Methylase family ILQ34_00790 PF13291 ACT domain ILQ34_00790 PF04607 Region found in RelA / SpoT proteins ILQ34_00790 PF02824 TGS domain ILQ34_00795 PF01192 RNA polymerase Rpb6 ILQ34_00800 PF00625 Guanylate kinase ILQ34_00805 PF03120 NAD-dependent DNA ligase OB-fold domain ILQ34_00805 PF01653 NAD-dependent DNA ligase adenylation domain ILQ34_00810 PF03458 UPF0126 domain ILQ34_00820 PF08340 Domain of unknown function (DUF1732) ILQ34_00820 PF03755 YicC-like family, N-terminal region ILQ34_00825 PF03725 3' exoribonuclease family, domain 2 ILQ34_00825 PF01138 3' exoribonuclease family, domain 1 ILQ34_00830 PF00156 Phosphoribosyl transferase domain ILQ34_00835 PF00440 Bacterial regulatory proteins, tetR family ILQ34_00840 PF00692 dUTPase ILQ34_00845 PF02441 Flavoprotein ILQ34_00845 PF04127 DNA / pantothenate metabolism flavoprotein ILQ34_00850 PF04002 RadC-like JAB domain ILQ34_00855 PF00830 Ribosomal L28 family ILQ34_00860 PF00471 Ribosomal protein L33 ILQ34_00865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ILQ34_00865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ILQ34_00865 PF06827 Zinc finger found in FPG and IleRS ILQ34_00870 PF01467 Cytidylyltransferase-like ILQ34_00875 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ILQ34_00880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ILQ34_00885 PF00534 Glycosyl transferases group 1 ILQ34_00885 PF13439 Glycosyltransferase Family 4 ILQ34_00895 PF08437 Glycosyl transferase family 8 C-terminal ILQ34_00895 PF01501 Glycosyl transferase family 8 ILQ34_00900 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) ILQ34_00905 PF01501 Glycosyl transferase family 8 ILQ34_00905 PF08437 Glycosyl transferase family 8 C-terminal ILQ34_00910 PF00534 Glycosyl transferases group 1 ILQ34_00915 PF04932 O-Antigen ligase ILQ34_00920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ILQ34_00925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ILQ34_00930 PF01370 NAD dependent epimerase/dehydratase family ILQ34_00935 PF09612 Bacterial protein of unknown function (HtrL_YibB) ILQ34_00940 PF00155 Aminotransferase class I and II ILQ34_00945 PF00107 Zinc-binding dehydrogenase ILQ34_00945 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_00950 PF00535 Glycosyl transferase family 2 ILQ34_00955 PF04748 Divergent polysaccharide deacetylase ILQ34_00960 PF01551 Peptidase family M23 ILQ34_00965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ILQ34_00965 PF01676 Metalloenzyme superfamily ILQ34_00970 PF00581 Rhodanese-like domain ILQ34_00975 PF00462 Glutaredoxin ILQ34_00980 PF02556 Preprotein translocase subunit SecB ILQ34_00985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ILQ34_00985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ILQ34_00990 PF06426 Serine acetyltransferase, N-terminal ILQ34_00990 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_00995 PF00588 SpoU rRNA Methylase family ILQ34_01000 PF01070 FMN-dependent dehydrogenase ILQ34_01005 PF07729 FCD domain ILQ34_01005 PF00392 Bacterial regulatory proteins, gntR family ILQ34_01010 PF02652 L-lactate permease ILQ34_01015 PF13018 Extended Signal Peptide of Type V secretion system ILQ34_01015 PF03895 YadA-like membrane anchor domain ILQ34_01015 PF05658 Head domain of trimeric autotransporter adhesin ILQ34_01015 PF05662 Coiled stalk of trimeric autotransporter adhesin ILQ34_01020 PF11622 Protein of unknown function (DUF3251) ILQ34_01025 PF10928 Protein of unknown function (DUF2810) ILQ34_01035 PF05068 Mannitol repressor ILQ34_01040 PF08125 Mannitol dehydrogenase C-terminal domain ILQ34_01040 PF01232 Mannitol dehydrogenase Rossmann domain ILQ34_01045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_01045 PF02378 Phosphotransferase system, EIIC ILQ34_01045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_01050 PF11742 Protein of unknown function (DUF3302) ILQ34_01055 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_01055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_01060 PF15596 Immunity protein 57 ILQ34_01070 PF15606 Bacterial toxin 34 ILQ34_01070 PF03527 RHS protein ILQ34_01070 PF05593 RHS Repeat ILQ34_01075 PF00043 Glutathione S-transferase, C-terminal domain ILQ34_01075 PF13417 Glutathione S-transferase, N-terminal domain ILQ34_01080 PF03841 L-seryl-tRNA selenium transferase ILQ34_01080 PF12390 Selenocysteine synthase N terminal ILQ34_01085 PF03144 Elongation factor Tu domain 2 ILQ34_01085 PF00009 Elongation factor Tu GTP binding domain ILQ34_01085 PF09106 Elongation factor SelB, winged helix ILQ34_01085 PF09107 Elongation factor SelB, winged helix ILQ34_01090 PF00465 Iron-containing alcohol dehydrogenase ILQ34_01100 PF00171 Aldehyde dehydrogenase family ILQ34_01105 PF11742 Protein of unknown function (DUF3302) ILQ34_01110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_01110 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_01115 PF03466 LysR substrate binding domain ILQ34_01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_01120 PF06629 MltA-interacting protein MipA ILQ34_01125 PF07944 Beta-L-arabinofuranosidase, GH127 ILQ34_01140 PF01614 Bacterial transcriptional regulator ILQ34_01140 PF09339 IclR helix-turn-helix domain ILQ34_01145 PF13247 4Fe-4S dicluster domain ILQ34_01150 PF00155 Aminotransferase class I and II ILQ34_01155 PF00128 Alpha amylase, catalytic domain ILQ34_01160 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ILQ34_01165 PF12833 Helix-turn-helix domain ILQ34_01170 PF02653 Branched-chain amino acid transport system / permease component ILQ34_01175 PF00005 ABC transporter ILQ34_01180 PF13407 Periplasmic binding protein domain ILQ34_01190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ34_01190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ34_01195 PF05360 yiaA/B two helix domain ILQ34_01200 PF05360 yiaA/B two helix domain ILQ34_01205 PF01757 Acyltransferase family ILQ34_01210 PF13983 YsaB-like lipoprotein ILQ34_01215 PF02091 Glycyl-tRNA synthetase alpha subunit ILQ34_01220 PF02092 Glycyl-tRNA synthetase beta subunit ILQ34_01220 PF05746 DALR anticodon binding domain ILQ34_01225 PF01848 Hok/gef family ILQ34_01230 PF00313 'Cold-shock' DNA-binding domain ILQ34_01235 PF01381 Helix-turn-helix ILQ34_01240 PF11254 Protein of unknown function (DUF3053) ILQ34_01245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ34_01245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ34_01250 PF00691 OmpA family ILQ34_01250 PF13488 Glycine zipper ILQ34_01255 PF01568 Molydopterin dinucleotide binding domain ILQ34_01255 PF00384 Molybdopterin oxidoreductase ILQ34_01255 PF18364 Molybdopterin oxidoreductase N-terminal domain ILQ34_01260 PF00583 Acetyltransferase (GNAT) family ILQ34_01265 PF03352 Methyladenine glycosylase ILQ34_01270 PF03797 Autotransporter beta-domain ILQ34_01275 PF07690 Major Facilitator Superfamily ILQ34_01280 PF00419 Fimbrial protein ILQ34_01285 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_01285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_01295 PF00419 Fimbrial protein ILQ34_01300 PF00419 Fimbrial protein ILQ34_01305 PF08019 Phosphoethanolamine transferase EptA/EptB ILQ34_01305 PF00884 Sulfatase ILQ34_01315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_01320 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_01325 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_01325 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ34_01330 PF00005 ABC transporter ILQ34_01330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_01335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_01335 PF00005 ABC transporter ILQ34_01340 PF03222 Tryptophan/tyrosine permease family ILQ34_01345 PF13940 Toxin Ldr, type I toxin-antitoxin system ILQ34_01350 PF11658 Cellulose biosynthesis protein BcsG ILQ34_01355 PF11120 Cellulose biosynthesis protein BcsF ILQ34_01360 PF10995 Cellulose biosynthesis GIL ILQ34_01365 PF10945 Cellulose biosynthesis protein BcsR ILQ34_01370 PF06564 Cellulose biosynthesis protein BcsQ ILQ34_01375 PF06564 Cellulose biosynthesis protein BcsQ ILQ34_01380 PF00535 Glycosyl transferase family 2 ILQ34_01380 PF07238 PilZ domain ILQ34_01385 PF03170 Bacterial cellulose synthase subunit ILQ34_01390 PF01270 Glycosyl hydrolases family 8 ILQ34_01395 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ILQ34_01400 PF17154 Gammaproteobacterial periplasmic sensor domain ILQ34_01400 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_01400 PF00563 EAL domain ILQ34_01400 PF00672 HAMP domain ILQ34_01405 PF00375 Sodium:dicarboxylate symporter family ILQ34_01410 PF05193 Peptidase M16 inactive domain ILQ34_01410 PF00675 Insulinase (Peptidase family M16) ILQ34_01415 PF00294 pfkB family carbohydrate kinase ILQ34_01420 PF00563 EAL domain ILQ34_01425 PF05170 AsmA family ILQ34_01430 PF07690 Major Facilitator Superfamily ILQ34_01430 PF00083 Sugar (and other) transporter ILQ34_01435 PF03631 Virulence factor BrkB ILQ34_01440 PF03466 LysR substrate binding domain ILQ34_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_01445 PF00196 Bacterial regulatory proteins, luxR family ILQ34_01450 PF01204 Trehalase ILQ34_01455 PF14376 Haem-binding domain ILQ34_01455 PF00034 Cytochrome c ILQ34_01455 PF03150 Di-haem cytochrome c peroxidase ILQ34_01460 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILQ34_01465 PF12833 Helix-turn-helix domain ILQ34_01470 PF12833 Helix-turn-helix domain ILQ34_01475 PF00873 AcrB/AcrD/AcrF family ILQ34_01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_01480 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_01490 PF00196 Bacterial regulatory proteins, luxR family ILQ34_01495 PF03729 Short repeat of unknown function (DUF308) ILQ34_01500 PF06411 HdeA/HdeB family ILQ34_01505 PF06411 HdeA/HdeB family ILQ34_01510 PF02308 MgtC family ILQ34_01515 PF00005 ABC transporter ILQ34_01520 PF01032 FecCD transport family ILQ34_01530 PF06228 Haem utilisation ChuX/HutX ILQ34_01535 PF04055 Radical SAM superfamily ILQ34_01540 PF01497 Periplasmic binding protein ILQ34_01545 PF00593 TonB dependent receptor ILQ34_01545 PF07715 TonB-dependent Receptor Plug Domain ILQ34_01550 PF05171 Haemin-degrading HemS.ChuX domain ILQ34_01555 PF00196 Bacterial regulatory proteins, luxR family ILQ34_01560 PF03843 Outer membrane lipoprotein Slp family ILQ34_01570 PF03960 ArsC family ILQ34_01575 PF02040 Arsenical pump membrane protein ILQ34_01580 PF01022 Bacterial regulatory protein, arsR family ILQ34_01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_01590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ34_01595 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ILQ34_01600 PF01432 Peptidase family M3 ILQ34_01605 PF04445 Putative SAM-dependent methyltransferase ILQ34_01610 PF00854 POT family ILQ34_01615 PF00582 Universal stress protein family ILQ34_01620 PF10625 Universal stress protein B (UspB) ILQ34_01625 PF01384 Phosphate transporter family ILQ34_01635 PF10951 Protein of unknown function (DUF2776) ILQ34_01640 PF13258 Domain of unknown function (DUF4049) ILQ34_01645 PF13258 Domain of unknown function (DUF4049) ILQ34_01650 PF13533 Biotin-lipoyl like ILQ34_01655 PF00005 ABC transporter ILQ34_01675 PF01116 Fructose-bisphosphate aldolase class-II ILQ34_01680 PF00381 PTS HPr component phosphorylation site ILQ34_01690 PF03611 PTS system sugar-specific permease component ILQ34_01695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_01705 PF07702 UTRA domain ILQ34_01705 PF00392 Bacterial regulatory proteins, gntR family ILQ34_01710 PF08753 NikR C terminal nickel binding domain ILQ34_01710 PF01402 Ribbon-helix-helix protein, copG family ILQ34_01715 PF00005 ABC transporter ILQ34_01720 PF00005 ABC transporter ILQ34_01725 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_01730 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_01735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_01740 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ34_01745 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ34_01745 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ34_01760 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ34_01760 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ34_01785 PF00535 Glycosyl transferase family 2 ILQ34_01795 PF00550 Phosphopantetheine attachment site ILQ34_01795 PF00975 Thioesterase domain ILQ34_01795 PF13193 AMP-binding enzyme C-terminal domain ILQ34_01795 PF00501 AMP-binding enzyme ILQ34_01795 PF00668 Condensation domain ILQ34_01805 PF00550 Phosphopantetheine attachment site ILQ34_01810 PF00550 Phosphopantetheine attachment site ILQ34_01815 PF01553 Acyltransferase ILQ34_01825 PF00891 O-methyltransferase domain ILQ34_01835 PF01594 AI-2E family transporter ILQ34_01840 PF07690 Major Facilitator Superfamily ILQ34_01845 PF08786 DcrB ILQ34_01850 PF02592 Putative vitamin uptake transporter ILQ34_01855 PF01206 Sulfurtransferase TusA ILQ34_01860 PF00403 Heavy-metal-associated domain ILQ34_01865 PF07947 YhhN family ILQ34_01870 PF10694 Protein of unknown function (DUF2500) ILQ34_01875 PF06611 Protein of unknown function (DUF1145) ILQ34_01885 PF00448 SRP54-type protein, GTPase domain ILQ34_01885 PF02881 SRP54-type protein, helical bundle domain ILQ34_01890 PF00005 ABC transporter ILQ34_01895 PF02687 FtsX-like permease family ILQ34_01895 PF18075 FtsX extracellular domain ILQ34_01900 PF04542 Sigma-70 region 2 ILQ34_01900 PF04545 Sigma-70, region 4 ILQ34_01905 PF13458 Periplasmic binding protein ILQ34_01920 PF12568 Acetyltransferase (GNAT) domain, PanZ ILQ34_01925 PF13458 Periplasmic binding protein ILQ34_01930 PF02653 Branched-chain amino acid transport system / permease component ILQ34_01935 PF11862 Domain of unknown function (DUF3382) ILQ34_01935 PF02653 Branched-chain amino acid transport system / permease component ILQ34_01940 PF12399 Branched-chain amino acid ATP-binding cassette transporter ILQ34_01940 PF00005 ABC transporter ILQ34_01945 PF00005 ABC transporter ILQ34_01955 PF13416 Bacterial extracellular solute-binding protein ILQ34_01960 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_01965 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_01970 PF00005 ABC transporter ILQ34_01970 PF17912 MalK OB fold domain ILQ34_01975 PF03009 Glycerophosphoryl diester phosphodiesterase family ILQ34_01980 PF10956 Protein of unknown function (DUF2756) ILQ34_01995 PF00583 Acetyltransferase (GNAT) family ILQ34_02000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ILQ34_02000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ34_02005 PF02678 Pirin ILQ34_02005 PF17954 Quercetinase C-terminal cupin domain ILQ34_02010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ34_02010 PF00356 Bacterial regulatory proteins, lacI family ILQ34_02015 PF01202 Shikimate kinase ILQ34_02020 PF02447 GntP family permease ILQ34_02025 PF09382 RQC domain ILQ34_02025 PF16124 RecQ zinc-binding ILQ34_02025 PF00570 HRDC domain ILQ34_02025 PF00271 Helicase conserved C-terminal domain ILQ34_02025 PF00270 DEAD/DEAH box helicase ILQ34_02030 PF00270 DEAD/DEAH box helicase ILQ34_02030 PF00570 HRDC domain ILQ34_02030 PF16124 RecQ zinc-binding ILQ34_02030 PF09382 RQC domain ILQ34_02030 PF00271 Helicase conserved C-terminal domain ILQ34_02045 PF01914 MarC family integral membrane protein ILQ34_02050 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ34_02050 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILQ34_02055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ILQ34_02055 PF00128 Alpha amylase, catalytic domain ILQ34_02055 PF02806 Alpha amylase, C-terminal all-beta domain ILQ34_02060 PF18390 Glycogen debranching enzyme C-terminal domain ILQ34_02060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ILQ34_02060 PF00128 Alpha amylase, catalytic domain ILQ34_02065 PF00483 Nucleotidyl transferase ILQ34_02070 PF00534 Glycosyl transferases group 1 ILQ34_02070 PF08323 Starch synthase catalytic domain ILQ34_02075 PF00343 Carbohydrate phosphorylase ILQ34_02095 PF01266 FAD dependent oxidoreductase ILQ34_02095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ILQ34_02100 PF00581 Rhodanese-like domain ILQ34_02105 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ILQ34_02105 PF01694 Rhomboid family ILQ34_02110 PF08220 DeoR-like helix-turn-helix domain ILQ34_02110 PF00455 DeoR C terminal sensor domain ILQ34_02115 PF06956 Regulator of RNA terminal phosphate cyclase ILQ34_02115 PF00158 Sigma-54 interaction domain ILQ34_02120 PF01139 tRNA-splicing ligase RtcB ILQ34_02125 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain ILQ34_02125 PF01137 RNA 3'-terminal phosphate cyclase ILQ34_02140 PF17874 MalT-like TPR region ILQ34_02140 PF00196 Bacterial regulatory proteins, luxR family ILQ34_02145 PF00343 Carbohydrate phosphorylase ILQ34_02150 PF02446 4-alpha-glucanotransferase ILQ34_02155 PF02447 GntP family permease ILQ34_02160 PF01521 Iron-sulphur cluster biosynthesis ILQ34_02160 PF01106 NifU-like domain ILQ34_02165 PF00156 Phosphoribosyl transferase domain ILQ34_02170 PF00561 alpha/beta hydrolase fold ILQ34_02175 PF04754 Putative transposase, YhgA-like ILQ34_02180 PF09012 FeoC like transcriptional regulator ILQ34_02185 PF07670 Nucleoside recognition ILQ34_02185 PF02421 Ferrous iron transport protein B ILQ34_02185 PF17910 FeoB cytosolic helical domain ILQ34_02185 PF07664 Ferrous iron transport protein B C terminus ILQ34_02190 PF04023 FeoA domain ILQ34_02195 PF09371 Tex-like protein N-terminal domain ILQ34_02195 PF17674 HHH domain ILQ34_02195 PF16921 Tex protein YqgF-like domain ILQ34_02195 PF00575 S1 RNA binding domain ILQ34_02200 PF03449 Transcription elongation factor, N-terminal ILQ34_02200 PF01272 Transcription elongation factor, GreA/GreB, C-term ILQ34_02205 PF00486 Transcriptional regulatory protein, C terminal ILQ34_02205 PF00072 Response regulator receiver domain ILQ34_02210 PF00672 HAMP domain ILQ34_02210 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_02215 PF01293 Phosphoenolpyruvate carboxykinase ILQ34_02220 PF13687 Domain of unknown function (DUF4153) ILQ34_02225 PF01430 Hsp33 protein ILQ34_02230 PF01479 S4 domain ILQ34_02235 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_02240 PF07095 Intracellular growth attenuator protein IgaA ILQ34_02245 PF00293 NUDIX domain ILQ34_02250 PF17092 Penicillin-binding protein OB-like domain ILQ34_02250 PF00912 Transglycosylase ILQ34_02250 PF00905 Penicillin binding protein transpeptidase domain ILQ34_02260 PF05137 Fimbrial assembly protein (PilN) ILQ34_02270 PF10748 DNA utilization proteins HofP ILQ34_02275 PF00263 Bacterial type II and III secretion system protein ILQ34_02275 PF03958 Bacterial type II/III secretion system short domain ILQ34_02280 PF01202 Shikimate kinase ILQ34_02285 PF01761 3-dehydroquinate synthase ILQ34_02290 PF05036 Sporulation related domain ILQ34_02295 PF02086 D12 class N6 adenine-specific DNA methyltransferase ILQ34_02300 PF00834 Ribulose-phosphate 3 epimerase family ILQ34_02305 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_02310 PF00579 tRNA synthetases class I (W and Y) ILQ34_02315 PF07702 UTRA domain ILQ34_02315 PF00392 Bacterial regulatory proteins, gntR family ILQ34_02320 PF00294 pfkB family carbohydrate kinase ILQ34_02325 PF00294 pfkB family carbohydrate kinase ILQ34_02330 PF01261 Xylose isomerase-like TIM barrel ILQ34_02335 PF01380 SIS domain ILQ34_02340 PF13520 Amino acid permease ILQ34_02345 PF13978 Protein of unknown function (DUF4223) ILQ34_02350 PF10414 Sirohaem synthase dimerisation region ILQ34_02350 PF14824 Sirohaem biosynthesis protein central ILQ34_02350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILQ34_02355 PF01226 Formate/nitrite transporter ILQ34_02360 PF13806 Rieske-like [2Fe-2S] domain ILQ34_02365 PF04324 BFD-like [2Fe-2S] binding domain ILQ34_02365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILQ34_02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_02365 PF18267 Rubredoxin NAD+ reductase C-terminal domain ILQ34_02365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILQ34_02370 PF07690 Major Facilitator Superfamily ILQ34_02375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILQ34_02380 PF10832 Protein of unknown function (DUF2559) ILQ34_02385 PF02661 Fic/DOC family ILQ34_02390 PF00117 Glutamine amidotransferase class-I ILQ34_02395 PF00202 Aminotransferase class-III ILQ34_02400 PF12805 FUSC-like inner membrane protein yccS ILQ34_02405 PF00027 Cyclic nucleotide-binding domain ILQ34_02405 PF13545 Crp-like helix-turn-helix domain ILQ34_02410 PF02566 OsmC-like protein ILQ34_02415 PF00485 Phosphoribulokinase / Uridine kinase family ILQ34_02420 PF06794 Uncharacterised protein family (UPF0270) ILQ34_02425 PF00561 alpha/beta hydrolase fold ILQ34_02430 PF00005 ABC transporter ILQ34_02430 PF12848 ABC transporter ILQ34_02435 PF02525 Flavodoxin-like fold ILQ34_02440 PF02254 TrkA-N domain ILQ34_02440 PF00999 Sodium/hydrogen exchanger family ILQ34_02445 PF09526 Probable metal-binding protein (DUF2387) ILQ34_02450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ34_02455 PF04102 SlyX ILQ34_02460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ34_02460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILQ34_02465 PF08348 YheO-like PAS domain ILQ34_02465 PF13309 HTH domain ILQ34_02470 PF02635 DsrE/DsrF-like family ILQ34_02475 PF02635 DsrE/DsrF-like family ILQ34_02480 PF04077 DsrH like protein ILQ34_02485 PF00164 Ribosomal protein S12/S23 ILQ34_02490 PF00177 Ribosomal protein S7p/S5e ILQ34_02495 PF00679 Elongation factor G C-terminus ILQ34_02495 PF14492 Elongation Factor G, domain II ILQ34_02495 PF03144 Elongation factor Tu domain 2 ILQ34_02495 PF03764 Elongation factor G, domain IV ILQ34_02495 PF00009 Elongation factor Tu GTP binding domain ILQ34_02500 PF03143 Elongation factor Tu C-terminal domain ILQ34_02500 PF00009 Elongation factor Tu GTP binding domain ILQ34_02500 PF03144 Elongation factor Tu domain 2 ILQ34_02505 PF04324 BFD-like [2Fe-2S] binding domain ILQ34_02510 PF00210 Ferritin-like domain ILQ34_02515 PF01478 Type IV leader peptidase family ILQ34_02520 PF00338 Ribosomal protein S10p/S20e ILQ34_02525 PF00297 Ribosomal protein L3 ILQ34_02530 PF00573 Ribosomal protein L4/L1 family ILQ34_02535 PF00276 Ribosomal protein L23 ILQ34_02540 PF00181 Ribosomal Proteins L2, RNA binding domain ILQ34_02540 PF03947 Ribosomal Proteins L2, C-terminal domain ILQ34_02545 PF00203 Ribosomal protein S19 ILQ34_02550 PF00237 Ribosomal protein L22p/L17e ILQ34_02555 PF07650 KH domain ILQ34_02555 PF00189 Ribosomal protein S3, C-terminal domain ILQ34_02560 PF00252 Ribosomal protein L16p/L10e ILQ34_02565 PF00831 Ribosomal L29 protein ILQ34_02570 PF00366 Ribosomal protein S17 ILQ34_02575 PF00238 Ribosomal protein L14p/L23e ILQ34_02580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ILQ34_02580 PF00467 KOW motif ILQ34_02585 PF00673 ribosomal L5P family C-terminus ILQ34_02585 PF00281 Ribosomal protein L5 ILQ34_02590 PF00253 Ribosomal protein S14p/S29e ILQ34_02595 PF00410 Ribosomal protein S8 ILQ34_02600 PF00347 Ribosomal protein L6 ILQ34_02605 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ILQ34_02610 PF00333 Ribosomal protein S5, N-terminal domain ILQ34_02610 PF03719 Ribosomal protein S5, C-terminal domain ILQ34_02615 PF00327 Ribosomal protein L30p/L7e ILQ34_02620 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ILQ34_02625 PF00344 SecY translocase ILQ34_02630 PF00444 Ribosomal protein L36 ILQ34_02635 PF00416 Ribosomal protein S13/S18 ILQ34_02640 PF00411 Ribosomal protein S11 ILQ34_02645 PF00163 Ribosomal protein S4/S9 N-terminal domain ILQ34_02645 PF01479 S4 domain ILQ34_02650 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ILQ34_02650 PF01000 RNA polymerase Rpb3/RpoA insert domain ILQ34_02650 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ILQ34_02655 PF01196 Ribosomal protein L17 ILQ34_02660 PF09350 Domain of unknown function (DUF1992) ILQ34_02665 PF13411 MerR HTH family regulatory protein ILQ34_02670 PF03889 Alternative ribosome-rescue factor A ILQ34_02675 PF01741 Large-conductance mechanosensitive channel, MscL ILQ34_02680 PF02080 TrkA-C domain ILQ34_02680 PF02254 TrkA-N domain ILQ34_02685 PF01029 NusB family ILQ34_02685 PF01189 16S rRNA methyltransferase RsmB/F ILQ34_02690 PF00551 Formyl transferase ILQ34_02690 PF02911 Formyl transferase, C-terminal domain ILQ34_02695 PF01327 Polypeptide deformylase ILQ34_02700 PF02481 DNA recombination-mediator protein A ILQ34_02700 PF17782 DprA winged helix domain ILQ34_02705 PF04361 Protein of unknown function (DUF494) ILQ34_02710 PF01396 Topoisomerase DNA binding C4 zinc finger ILQ34_02715 PF01300 Telomere recombination ILQ34_02720 PF01488 Shikimate / quinate 5-dehydrogenase ILQ34_02720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ILQ34_02720 PF08501 Shikimate dehydrogenase substrate binding domain ILQ34_02725 PF07369 Protein of unknown function (DUF1488) ILQ34_02730 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_02770 PF00005 ABC transporter ILQ34_02775 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_02780 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_02785 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_02800 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_02800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_02805 PF00440 Bacterial regulatory proteins, tetR family ILQ34_02805 PF08361 MAATS-type transcriptional repressor, C-terminal region ILQ34_02810 PF10831 Protein of unknown function (DUF2556) ILQ34_02815 PF01555 DNA methylase ILQ34_02820 PF02954 Bacterial regulatory protein, Fis family ILQ34_02825 PF01207 Dihydrouridine synthase (Dus) ILQ34_02835 PF00474 Sodium:solute symporter family ILQ34_02840 PF06196 Protein of unknown function (DUF997) ILQ34_02845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILQ34_02845 PF00289 Biotin carboxylase, N-terminal domain ILQ34_02845 PF02785 Biotin carboxylase C-terminal domain ILQ34_02850 PF00364 Biotin-requiring enzyme ILQ34_02855 PF00107 Zinc-binding dehydrogenase ILQ34_02855 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_02860 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_02860 PF17157 Gammaproteobacterial periplasmic sensor domain ILQ34_02860 PF00563 EAL domain ILQ34_02870 PF04085 rod shape-determining protein MreC ILQ34_02875 PF04093 rod shape-determining protein MreD ILQ34_02880 PF02545 Maf-like protein ILQ34_02885 PF00575 S1 RNA binding domain ILQ34_02885 PF10150 Ribonuclease E/G family ILQ34_02890 PF13116 Protein of unknown function ILQ34_02890 PF13502 AsmA-like C-terminal region ILQ34_02895 PF01523 Putative modulator of DNA gyrase ILQ34_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_02900 PF03466 LysR substrate binding domain ILQ34_02905 PF07869 Protein of unknown function (DUF1656) ILQ34_02910 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_02910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_02915 PF04632 Fusaric acid resistance protein family ILQ34_02920 PF01337 Barstar (barnase inhibitor) ILQ34_02925 PF07338 Protein of unknown function (DUF1471) ILQ34_02930 PF02863 Arginine repressor, C-terminal domain ILQ34_02930 PF01316 Arginine repressor, DNA binding domain ILQ34_02935 PF00056 lactate/malate dehydrogenase, NAD binding domain ILQ34_02935 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ILQ34_02940 PF13180 PDZ domain ILQ34_02945 PF13180 PDZ domain ILQ34_02945 PF00595 PDZ domain ILQ34_02950 PF06295 Protein of unknown function (DUF1043) ILQ34_02955 PF03969 AFG1-like ATPase ILQ34_02960 PF00572 Ribosomal protein L13 ILQ34_02965 PF00380 Ribosomal protein S9/S16 ILQ34_02970 PF02798 Glutathione S-transferase, N-terminal domain ILQ34_02970 PF00043 Glutathione S-transferase, C-terminal domain ILQ34_02975 PF04386 Stringent starvation protein B ILQ34_02980 PF03606 C4-dicarboxylate anaerobic carrier ILQ34_02985 PF00392 Bacterial regulatory proteins, gntR family ILQ34_02985 PF07729 FCD domain ILQ34_02990 PF00701 Dihydrodipicolinate synthetase family ILQ34_02995 PF07690 Major Facilitator Superfamily ILQ34_03000 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ILQ34_03005 PF00480 ROK family ILQ34_03010 PF04074 YhcH/YjgK/YiaL ILQ34_03015 PF17761 DUF1016 N-terminal domain ILQ34_03015 PF06250 YhcG PDDEXK nuclease domain ILQ34_03020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_03020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ34_03025 PF01493 GXGXG motif ILQ34_03025 PF01645 Conserved region in glutamate synthase ILQ34_03025 PF04898 Glutamate synthase central domain ILQ34_03025 PF00310 Glutamine amidotransferases class-II ILQ34_03030 PF04055 Radical SAM superfamily ILQ34_03030 PF16199 Radical_SAM C-terminal domain ILQ34_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_03035 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_03035 PF18415 Histidine kinase receptor ArcB trans-membrane domain ILQ34_03035 PF01627 Hpt domain ILQ34_03035 PF00989 PAS fold ILQ34_03035 PF00072 Response regulator receiver domain ILQ34_03045 PF00912 Transglycosylase ILQ34_03050 PF10707 PhoP regulatory network protein YrbL ILQ34_03055 PF00381 PTS HPr component phosphorylation site ILQ34_03060 PF03668 P-loop ATPase protein family ILQ34_03065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_03070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ILQ34_03075 PF00309 Sigma-54 factor, Activator interacting domain (AID) ILQ34_03075 PF04963 Sigma-54 factor, core binding domain ILQ34_03075 PF04552 Sigma-54, DNA binding domain ILQ34_03080 PF12399 Branched-chain amino acid ATP-binding cassette transporter ILQ34_03080 PF00005 ABC transporter ILQ34_03085 PF03968 OstA-like protein ILQ34_03090 PF06835 Lipopolysaccharide-assembly, LptC-related ILQ34_03100 PF00571 CBS domain ILQ34_03100 PF01380 SIS domain ILQ34_03105 PF01699 Sodium/calcium exchanger protein ILQ34_03110 PF00005 ABC transporter ILQ34_03115 PF02405 Permease MlaE ILQ34_03120 PF02470 MlaD protein ILQ34_03125 PF05494 MlaC protein ILQ34_03130 PF13466 STAS domain ILQ34_03135 PF01722 BolA-like protein ILQ34_03140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILQ34_03145 PF13693 Winged helix-turn-helix DNA-binding ILQ34_03150 PF00348 Polyprenyl synthetase ILQ34_03155 PF00829 Ribosomal prokaryotic L21 protein ILQ34_03160 PF01016 Ribosomal L27 protein ILQ34_03165 PF00892 EamA-like transporter family ILQ34_03170 PF01926 50S ribosome-binding GTPase ILQ34_03170 PF01018 GTP1/OBG ILQ34_03175 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ILQ34_03180 PF01272 Transcription elongation factor, GreA/GreB, C-term ILQ34_03180 PF03449 Transcription elongation factor, N-terminal ILQ34_03185 PF01985 CRS1 / YhbY (CRM) domain ILQ34_03190 PF01728 FtsJ-like methyltransferase ILQ34_03195 PF00004 ATPase family associated with various cellular activities (AAA) ILQ34_03195 PF17862 AAA+ lid domain ILQ34_03195 PF06480 FtsH Extracellular ILQ34_03195 PF01434 Peptidase family M41 ILQ34_03200 PF00809 Pterin binding enzyme ILQ34_03205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ34_03205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ34_03205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ34_03205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ34_03210 PF03840 Preprotein translocase SecG subunit ILQ34_03220 PF00884 Sulfatase ILQ34_03225 PF00764 Arginosuccinate synthase ILQ34_03235 PF17384 RimP C-terminal SH3 domain ILQ34_03235 PF02576 RimP N-terminal domain ILQ34_03240 PF00575 S1 RNA binding domain ILQ34_03240 PF08529 NusA N-terminal domain ILQ34_03240 PF13184 NusA-like KH domain ILQ34_03245 PF04760 Translation initiation factor IF-2, N-terminal region ILQ34_03245 PF08364 Bacterial translation initiation factor IF-2 associated region ILQ34_03245 PF11987 Translation-initiation factor 2 ILQ34_03245 PF00009 Elongation factor Tu GTP binding domain ILQ34_03250 PF02033 Ribosome-binding factor A ILQ34_03255 PF01509 TruB family pseudouridylate synthase (N terminal domain) ILQ34_03255 PF16198 tRNA pseudouridylate synthase B C-terminal domain ILQ34_03255 PF09157 Pseudouridine synthase II TruB, C-terminal ILQ34_03260 PF00312 Ribosomal protein S15 ILQ34_03265 PF03725 3' exoribonuclease family, domain 2 ILQ34_03265 PF01138 3' exoribonuclease family, domain 1 ILQ34_03265 PF00575 S1 RNA binding domain ILQ34_03265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ILQ34_03265 PF00013 KH domain ILQ34_03270 PF13181 Tetratricopeptide repeat ILQ34_03270 PF07719 Tetratricopeptide repeat ILQ34_03280 PF00270 DEAD/DEAH box helicase ILQ34_03280 PF00271 Helicase conserved C-terminal domain ILQ34_03280 PF12343 Cold shock protein DEAD box A ILQ34_03280 PF03880 DbpA RNA binding domain ILQ34_03285 PF03222 Tryptophan/tyrosine permease family ILQ34_03290 PF00296 Luciferase-like monooxygenase ILQ34_03295 PF01136 Peptidase family U32 ILQ34_03300 PF01136 Peptidase family U32 ILQ34_03305 PF02036 SCP-2 sterol transfer family ILQ34_03310 PF13508 Acetyltransferase (GNAT) domain ILQ34_03315 PF01541 GIY-YIG catalytic domain ILQ34_03325 PF01965 DJ-1/PfpI family ILQ34_03330 PF13460 NAD(P)H-binding ILQ34_03335 PF03773 Predicted permease ILQ34_03340 PF04972 BON domain ILQ34_03345 PF13580 SIS domain ILQ34_03350 PF02021 Uncharacterised protein family UPF0102 ILQ34_03355 PF04348 LppC putative lipoprotein ILQ34_03360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ILQ34_03380 PF00577 Outer membrane usher protein ILQ34_03380 PF13954 PapC N-terminal domain ILQ34_03380 PF13953 PapC C-terminal domain ILQ34_03385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_03385 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_03390 PF00419 Fimbrial protein ILQ34_03400 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ34_03410 PF03830 PTS system sorbose subfamily IIB component ILQ34_03415 PF01116 Fructose-bisphosphate aldolase class-II ILQ34_03420 PF01380 SIS domain ILQ34_03425 PF01979 Amidohydrolase family ILQ34_03430 PF03610 PTS system fructose IIA component ILQ34_03435 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ34_03440 PF03609 PTS system sorbose-specific iic component ILQ34_03445 PF03830 PTS system sorbose subfamily IIB component ILQ34_03450 PF08013 Tagatose 6 phosphate kinase ILQ34_03455 PF08220 DeoR-like helix-turn-helix domain ILQ34_03455 PF00455 DeoR C terminal sensor domain ILQ34_03460 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system ILQ34_03465 PF15937 prlF antitoxin for toxin YhaV_toxin ILQ34_03470 PF08666 SAF domain ILQ34_03470 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ILQ34_03475 PF07690 Major Facilitator Superfamily ILQ34_03480 PF03328 HpcH/HpaI aldolase/citrate lyase family ILQ34_03485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ34_03485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILQ34_03490 PF02595 Glycerate kinase family ILQ34_03515 PF03466 LysR substrate binding domain ILQ34_03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_03520 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_03525 PF03222 Tryptophan/tyrosine permease family ILQ34_03530 PF00871 Acetokinase family ILQ34_03535 PF02901 Pyruvate formate lyase-like ILQ34_03535 PF01228 Glycine radical ILQ34_03540 PF01042 Endoribonuclease L-PSP ILQ34_03545 PF03315 Serine dehydratase beta chain ILQ34_03545 PF03313 Serine dehydratase alpha chain ILQ34_03555 PF03313 Serine dehydratase alpha chain ILQ34_03565 PF02678 Pirin ILQ34_03565 PF17954 Quercetinase C-terminal cupin domain ILQ34_03570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_03570 PF03466 LysR substrate binding domain ILQ34_03575 PF05656 Protein of unknown function (DUF805) ILQ34_03580 PF05656 Protein of unknown function (DUF805) ILQ34_03585 PF13409 Glutathione S-transferase, N-terminal domain ILQ34_03590 PF07681 DoxX ILQ34_03595 PF13997 YqjK-like protein ILQ34_03600 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ILQ34_03605 PF05957 Bacterial protein of unknown function (DUF883) ILQ34_03610 PF06476 Protein of unknown function (DUF1090) ILQ34_03615 PF13721 SecD export protein N-terminal TM region ILQ34_03620 PF09335 SNARE associated Golgi protein ILQ34_03625 PF07729 FCD domain ILQ34_03625 PF00392 Bacterial regulatory proteins, gntR family ILQ34_03630 PF07690 Major Facilitator Superfamily ILQ34_03635 PF02614 Glucuronate isomerase ILQ34_03640 PF08666 SAF domain ILQ34_03640 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ILQ34_03645 PF10688 Bacterial inner membrane protein ILQ34_03650 PF00375 Sodium:dicarboxylate symporter family ILQ34_03655 PF03741 Integral membrane protein TerC family ILQ34_03660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ34_03665 PF02698 DUF218 domain ILQ34_03670 PF01863 Protein of unknown function DUF45 ILQ34_03675 PF05175 Methyltransferase small domain ILQ34_03680 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system ILQ34_03685 PF01381 Helix-turn-helix ILQ34_03690 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_03690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILQ34_03695 PF01204 Trehalase ILQ34_03705 PF13520 Amino acid permease ILQ34_03710 PF04074 YhcH/YjgK/YiaL ILQ34_03715 PF02929 Beta galactosidase small chain ILQ34_03715 PF16353 Domain of unknown function(DUF4981) ILQ34_03715 PF02837 Glycosyl hydrolases family 2, sugar binding domain ILQ34_03715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ILQ34_03715 PF00703 Glycosyl hydrolases family 2 ILQ34_03720 PF00356 Bacterial regulatory proteins, lacI family ILQ34_03725 PF01588 Putative tRNA binding domain ILQ34_03730 PF00202 Aminotransferase class-III ILQ34_03735 PF08447 PAS fold ILQ34_03735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ34_03740 PF03551 Transcriptional regulator PadR-like family ILQ34_03745 PF04954 Siderophore-interacting protein ILQ34_03745 PF08021 Siderophore-interacting FAD-binding domain ILQ34_03755 PF03167 Uracil DNA glycosylase superfamily ILQ34_03760 PF04546 Sigma-70, non-essential region ILQ34_03760 PF04545 Sigma-70, region 4 ILQ34_03760 PF03979 Sigma-70 factor, region 1.1 ILQ34_03760 PF04539 Sigma-70 region 3 ILQ34_03760 PF00140 Sigma-70 factor, region 1.2 ILQ34_03760 PF04542 Sigma-70 region 2 ILQ34_03765 PF01807 CHC2 zinc finger ILQ34_03765 PF08275 DNA primase catalytic core, N-terminal domain ILQ34_03765 PF08278 DNA primase DnaG DnaB-binding ILQ34_03765 PF10410 DnaB-helicase binding domain of primase ILQ34_03770 PF01165 Ribosomal protein S21 ILQ34_03775 PF00814 Glycoprotease family ILQ34_03780 PF00939 Sodium:sulfate symporter transmembrane region ILQ34_03785 PF05683 Fumarase C-terminus ILQ34_03790 PF05681 Fumarate hydratase (Fumerase) ILQ34_03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_03795 PF03466 LysR substrate binding domain ILQ34_03800 PF02660 Glycerol-3-phosphate acyltransferase ILQ34_03805 PF02152 Dihydroneopterin aldolase ILQ34_03810 PF02673 Bacitracin resistance protein BacA ILQ34_03815 PF12627 Probable RNA and SrmB- binding site of polymerase A ILQ34_03815 PF01966 HD domain ILQ34_03815 PF01743 Poly A polymerase head domain ILQ34_03820 PF08239 Bacterial SH3 domain ILQ34_03825 PF01928 CYTH domain ILQ34_03830 PF03710 Glutamate-ammonia ligase adenylyltransferase ILQ34_03830 PF08335 GlnD PII-uridylyltransferase ILQ34_03835 PF01467 Cytidylyltransferase-like ILQ34_03835 PF00294 pfkB family carbohydrate kinase ILQ34_03850 PF01145 SPFH domain / Band 7 family ILQ34_03850 PF15975 Flotillin ILQ34_03855 PF07290 Protein of unknown function (DUF1449) ILQ34_03860 PF08971 Glycogen synthesis protein ILQ34_03865 PF04380 Membrane fusogenic activity ILQ34_03870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ILQ34_03880 PF02535 ZIP Zinc transporter ILQ34_03885 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ILQ34_03890 PF03738 Glutathionylspermidine synthase preATP-grasp ILQ34_03895 PF06693 Protein of unknown function (DUF1190) ILQ34_03900 PF02321 Outer membrane efflux protein ILQ34_03905 PF00293 NUDIX domain ILQ34_03910 PF06853 Protein of unknown function (DUF1249) ILQ34_03915 PF00149 Calcineurin-like phosphoesterase ILQ34_03920 PF05728 Uncharacterised protein family (UPF0227) ILQ34_03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_03925 PF00986 DNA gyrase B subunit, carboxyl terminus ILQ34_03925 PF01751 Toprim domain ILQ34_03925 PF00204 DNA gyrase B ILQ34_03930 PF07715 TonB-dependent Receptor Plug Domain ILQ34_03935 PF00005 ABC transporter ILQ34_03940 PF01032 FecCD transport family ILQ34_03945 PF01032 FecCD transport family ILQ34_03955 PF01418 Helix-turn-helix domain, rpiR family ILQ34_03955 PF01380 SIS domain ILQ34_03960 PF03992 Antibiotic biosynthesis monooxygenase ILQ34_03965 PF02525 Flavodoxin-like fold ILQ34_03970 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_03970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_03970 PF08521 Two-component sensor kinase N-terminal ILQ34_03975 PF00486 Transcriptional regulatory protein, C terminal ILQ34_03975 PF00072 Response regulator receiver domain ILQ34_03980 PF04076 Bacterial OB fold (BOF) protein ILQ34_03985 PF06445 GyrI-like small molecule binding domain ILQ34_03990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_03995 PF00521 DNA gyrase/topoisomerase IV, subunit A ILQ34_03995 PF03989 DNA gyrase C-terminal domain, beta-propeller ILQ34_04000 PF01553 Acyltransferase ILQ34_04005 PF00394 Multicopper oxidase ILQ34_04005 PF07731 Multicopper oxidase ILQ34_04005 PF07732 Multicopper oxidase ILQ34_04010 PF04055 Radical SAM superfamily ILQ34_04010 PF08497 Radical SAM N-terminal ILQ34_04010 PF11842 Domain of unknown function (DUF3362) ILQ34_04015 PF04728 Lipoprotein leucine-zipper ILQ34_04025 PF00248 Aldo/keto reductase family ILQ34_04030 PF00465 Iron-containing alcohol dehydrogenase ILQ34_04035 PF06719 AraC-type transcriptional regulator N-terminus ILQ34_04035 PF12833 Helix-turn-helix domain ILQ34_04040 PF09335 SNARE associated Golgi protein ILQ34_04045 PF01053 Cys/Met metabolism PLP-dependent enzyme ILQ34_04050 PF01618 MotA/TolQ/ExbB proton channel family ILQ34_04055 PF02472 Biopolymer transport protein ExbD/TolR ILQ34_04065 PF03350 Uncharacterized protein family, UPF0114 ILQ34_04070 PF00248 Aldo/keto reductase family ILQ34_04075 PF01738 Dienelactone hydrolase family ILQ34_04080 PF11115 Protein of unknown function (DUF2623) ILQ34_04085 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ILQ34_04085 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ34_04090 PF13247 4Fe-4S dicluster domain ILQ34_04095 PF03916 Polysulphide reductase, NrfD ILQ34_04100 PF00374 Nickel-dependent hydrogenase ILQ34_04105 PF01750 Hydrogenase maturation protease ILQ34_04110 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE ILQ34_04115 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ILQ34_04120 PF01455 HupF/HypC family ILQ34_04125 PF02798 Glutathione S-transferase, N-terminal domain ILQ34_04130 PF05257 CHAP domain ILQ34_04130 PF03738 Glutathionylspermidine synthase preATP-grasp ILQ34_04155 PF05717 IS66 Orf2 like protein ILQ34_04160 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_04160 PF13007 Transposase C of IS166 homeodomain ILQ34_04160 PF13817 IS66 C-terminal element ILQ34_04160 PF03050 Transposase IS66 family ILQ34_04165 PF05717 IS66 Orf2 like protein ILQ34_04175 PF01473 Putative cell wall binding repeat ILQ34_04175 PF11713 Peptidase C80 family ILQ34_04175 PF12919 TcdA/TcdB catalytic glycosyltransferase domain ILQ34_04175 PF12920 TcdA/TcdB pore forming domain ILQ34_04175 PF12918 TcdB toxin N-terminal helical domain ILQ34_04220 PF06316 Enterobacterial Ail/Lom protein ILQ34_04235 PF05717 IS66 Orf2 like protein ILQ34_04250 PF00589 Phage integrase family ILQ34_04250 PF13356 Arm DNA-binding domain ILQ34_04260 PF04474 Protein of unknown function (DUF554) ILQ34_04265 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ34_04265 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ34_04265 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ34_04270 PF03825 Nucleoside H+ symporter ILQ34_04275 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ILQ34_04275 PF01464 Transglycosylase SLT domain ILQ34_04280 PF04362 Bacterial Fe(2+) trafficking ILQ34_04285 PF10576 Iron-sulfur binding domain of endonuclease III ILQ34_04285 PF00730 HhH-GPD superfamily base excision DNA repair protein ILQ34_04285 PF14815 NUDIX domain ILQ34_04285 PF00633 Helix-hairpin-helix motif ILQ34_04290 PF02390 Putative methyltransferase ILQ34_04295 PF04320 Protein with unknown function (DUF469) ILQ34_04300 PF11101 Protein of unknown function (DUF2884) ILQ34_04305 PF17763 Glutaminase/Asparaginase C-terminal domain ILQ34_04305 PF00710 Asparaginase, N-terminal ILQ34_04310 PF06717 Protein of unknown function (DUF1202) ILQ34_04315 PF06969 HemN C-terminal domain ILQ34_04315 PF04055 Radical SAM superfamily ILQ34_04320 PF01725 Ham1 family ILQ34_04325 PF02594 Uncharacterised ACR, YggU family COG1872 ILQ34_04330 PF02325 YGGT family ILQ34_04335 PF01168 Alanine racemase, N-terminal domain ILQ34_04340 PF00437 Type II/IV secretion system protein ILQ34_04345 PF03652 Holliday junction resolvase ILQ34_04350 PF02622 Uncharacterized ACR, COG1678 ILQ34_04355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ILQ34_04355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ILQ34_04360 PF04452 RNA methyltransferase ILQ34_04365 PF04231 Endonuclease I ILQ34_04370 PF10263 SprT-like family ILQ34_04370 PF17283 SprT-like zinc ribbon domain ILQ34_04375 PF00083 Sugar (and other) transporter ILQ34_04380 PF02773 S-adenosylmethionine synthetase, C-terminal domain ILQ34_04380 PF02772 S-adenosylmethionine synthetase, central domain ILQ34_04380 PF00438 S-adenosylmethionine synthetase, N-terminal domain ILQ34_04385 PF17430 Uncharacterized YqgC-like ILQ34_04390 PF11036 Virulence promoting factor ILQ34_04395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ILQ34_04395 PF17944 Arginine decarboxylase C-terminal helical extension ILQ34_04395 PF17810 Arginine decarboxylase helical bundle domain ILQ34_04405 PF00491 Arginase family ILQ34_04410 PF01435 Peptidase family M48 ILQ34_04415 PF00456 Transketolase, thiamine diphosphate binding domain ILQ34_04415 PF02779 Transketolase, pyrimidine binding domain ILQ34_04415 PF02780 Transketolase, C-terminal domain ILQ34_04420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_04425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_04425 PF02378 Phosphotransferase system, EIIC ILQ34_04430 PF00107 Zinc-binding dehydrogenase ILQ34_04430 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_04435 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ILQ34_04440 PF05068 Mannitol repressor ILQ34_04450 PF00005 ABC transporter ILQ34_04455 PF00005 ABC transporter ILQ34_04475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILQ34_04475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILQ34_04480 PF00162 Phosphoglycerate kinase ILQ34_04485 PF01116 Fructose-bisphosphate aldolase class-II ILQ34_04490 PF00924 Mechanosensitive ion channel ILQ34_04490 PF05552 Conserved TM helix ILQ34_04495 PF01810 LysE type translocator ILQ34_04500 PF04402 Protein of unknown function (DUF541) ILQ34_04510 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ILQ34_04510 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ILQ34_04515 PF00378 Enoyl-CoA hydratase/isomerase ILQ34_04525 PF02310 B12 binding domain ILQ34_04525 PF01642 Methylmalonyl-CoA mutase ILQ34_04530 PF03466 LysR substrate binding domain ILQ34_04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_04535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ILQ34_04540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ34_04540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ34_04540 PF01842 ACT domain ILQ34_04555 PF01812 5-formyltetrahydrofolate cyclo-ligase family ILQ34_04565 PF05164 Cell division protein ZapA ILQ34_04570 PF03695 Uncharacterised protein family (UPF0149) ILQ34_04575 PF05195 Aminopeptidase P, N-terminal domain ILQ34_04575 PF00557 Metallopeptidase family M24 ILQ34_04580 PF01494 FAD binding domain ILQ34_04585 PF01494 FAD binding domain ILQ34_04595 PF01571 Aminomethyltransferase folate-binding domain ILQ34_04595 PF08669 Glycine cleavage T-protein C-terminal barrel domain ILQ34_04600 PF01597 Glycine cleavage H-protein ILQ34_04605 PF02347 Glycine cleavage system P-protein ILQ34_04610 PF00232 Glycosyl hydrolase family 1 ILQ34_04615 PF04266 ASCH domain ILQ34_04620 PF03006 Haemolysin-III related ILQ34_04625 PF01571 Aminomethyltransferase folate-binding domain ILQ34_04630 PF03937 Flavinator of succinate dehydrogenase ILQ34_04635 PF07254 Membrane-bound toxin component of toxin-antitoxin system ILQ34_04640 PF00258 Flavodoxin ILQ34_04645 PF00589 Phage integrase family ILQ34_04645 PF02899 Phage integrase, N-terminal SAM-like domain ILQ34_04650 PF13098 Thioredoxin-like domain ILQ34_04650 PF10411 Disulfide bond isomerase protein N-terminus ILQ34_04655 PF01368 DHH family ILQ34_04655 PF02272 DHHA1 domain ILQ34_04655 PF17768 RecJ OB domain ILQ34_04665 PF01336 OB-fold nucleic acid binding domain ILQ34_04665 PF00152 tRNA synthetases class II (D, K and N) ILQ34_04670 PF00293 NUDIX domain ILQ34_04685 PF00860 Permease family ILQ34_04710 PF00860 Permease family ILQ34_04715 PF01979 Amidohydrolase family ILQ34_04720 PF00860 Permease family ILQ34_04725 PF01799 [2Fe-2S] binding domain ILQ34_04725 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILQ34_04725 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILQ34_04730 PF00941 FAD binding domain in molybdopterin dehydrogenase ILQ34_04735 PF01979 Amidohydrolase family ILQ34_04740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ34_04740 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_04745 PF12804 MobA-like NTP transferase domain ILQ34_04755 PF13478 XdhC Rossmann domain ILQ34_04755 PF02625 XdhC and CoxI family ILQ34_04760 PF00696 Amino acid kinase family ILQ34_04765 PF01979 Amidohydrolase family ILQ34_04770 PF01546 Peptidase family M20/M25/M40 ILQ34_04770 PF07687 Peptidase dimerisation domain ILQ34_04775 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_04780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILQ34_04780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILQ34_04785 PF13188 PAS domain ILQ34_04785 PF00158 Sigma-54 interaction domain ILQ34_04785 PF02954 Bacterial regulatory protein, Fis family ILQ34_04790 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ34_04790 PF01799 [2Fe-2S] binding domain ILQ34_04795 PF00941 FAD binding domain in molybdopterin dehydrogenase ILQ34_04795 PF03450 CO dehydrogenase flavoprotein C-terminal domain ILQ34_04800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILQ34_04800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILQ34_04805 PF01476 LysM domain ILQ34_04805 PF01551 Peptidase family M23 ILQ34_04825 PF12833 Helix-turn-helix domain ILQ34_04830 PF00263 Bacterial type II and III secretion system protein ILQ34_04830 PF03958 Bacterial type II/III secretion system short domain ILQ34_04835 PF07201 HrpJ-like domain ILQ34_04840 PF00771 FHIPEP family ILQ34_04845 PF02874 ATP synthase alpha/beta family, beta-barrel domain ILQ34_04845 PF18269 T3SS EscN ATPase C-terminal domain ILQ34_04845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ34_04860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ILQ34_04865 PF00813 FliP family ILQ34_04870 PF01313 Bacterial export proteins, family 3 ILQ34_04880 PF01312 FlhB HrpN YscU SpaS Family ILQ34_04900 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF ILQ34_04910 PF01514 Secretory protein of YscJ/FliF family ILQ34_04915 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) ILQ34_04930 PF00196 Bacterial regulatory proteins, luxR family ILQ34_04930 PF00072 Response regulator receiver domain ILQ34_04935 PF01464 Transglycosylase SLT domain ILQ34_04945 PF00486 Transcriptional regulatory protein, C terminal ILQ34_04950 PF07720 Tetratricopeptide repeat ILQ34_04975 PF00486 Transcriptional regulatory protein, C terminal ILQ34_04980 PF00196 Bacterial regulatory proteins, luxR family ILQ34_04985 PF03222 Tryptophan/tyrosine permease family ILQ34_04990 PF02803 Thiolase, C-terminal domain ILQ34_04990 PF00108 Thiolase, N-terminal domain ILQ34_04995 PF04962 KduI/IolB family ILQ34_05005 PF00083 Sugar (and other) transporter ILQ34_05010 PF01177 Asp/Glu/Hydantoin racemase ILQ34_05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_05015 PF03466 LysR substrate binding domain ILQ34_05020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ILQ34_05020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ILQ34_05025 PF00356 Bacterial regulatory proteins, lacI family ILQ34_05030 PF00501 AMP-binding enzyme ILQ34_05030 PF01553 Acyltransferase ILQ34_05035 PF07690 Major Facilitator Superfamily ILQ34_05040 PF00248 Aldo/keto reductase family ILQ34_05045 PF06004 Bacterial protein of unknown function (DUF903) ILQ34_05050 PF03741 Integral membrane protein TerC family ILQ34_05055 PF02976 DNA mismatch repair enzyme MutH ILQ34_05060 PF00293 NUDIX domain ILQ34_05065 PF01590 GAF domain ILQ34_05065 PF05524 PEP-utilising enzyme, N-terminal ILQ34_05065 PF00391 PEP-utilising enzyme, mobile domain ILQ34_05065 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ34_05070 PF01790 Prolipoprotein diacylglyceryl transferase ILQ34_05075 PF00303 Thymidylate synthase ILQ34_05080 PF07963 Prokaryotic N-terminal methylation motif ILQ34_05085 PF07963 Prokaryotic N-terminal methylation motif ILQ34_05090 PF10713 Protein of unknown function (DUF2509) ILQ34_05095 PF07963 Prokaryotic N-terminal methylation motif ILQ34_05095 PF12528 Type II secretion prepilin peptidase dependent protein C ILQ34_05100 PF17946 RecC C-terminal domain ILQ34_05105 PF05193 Peptidase M16 inactive domain ILQ34_05105 PF16187 Middle or third domain of peptidase_M16 ILQ34_05105 PF00675 Insulinase (Peptidase family M16) ILQ34_05110 PF13361 UvrD-like helicase C-terminal domain ILQ34_05110 PF00580 UvrD/REP helicase N-terminal domain ILQ34_05110 PF12705 PD-(D/E)XK nuclease superfamily ILQ34_05115 PF13538 UvrD-like helicase C-terminal domain ILQ34_05120 PF00696 Amino acid kinase family ILQ34_05120 PF00583 Acetyltransferase (GNAT) family ILQ34_05125 PF01520 N-acetylmuramoyl-L-alanine amidase ILQ34_05125 PF11741 AMIN domain ILQ34_05145 PF06725 3D domain ILQ34_05145 PF03562 MltA specific insert domain ILQ34_05150 PF00899 ThiF family ILQ34_05155 PF02657 Fe-S metabolism associated domain ILQ34_05160 PF00266 Aminotransferase class-V ILQ34_05165 PF06004 Bacterial protein of unknown function (DUF903) ILQ34_05170 PF03466 LysR substrate binding domain ILQ34_05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_05175 PF04241 Protein of unknown function (DUF423) ILQ34_05180 PF01728 FtsJ-like methyltransferase ILQ34_05180 PF18125 RlmM ferredoxin-like domain ILQ34_05185 PF08220 DeoR-like helix-turn-helix domain ILQ34_05185 PF00455 DeoR C terminal sensor domain ILQ34_05190 PF05025 RbsD / FucU transport protein family ILQ34_05195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ34_05195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ34_05200 PF02952 L-fucose isomerase, C-terminal domain ILQ34_05200 PF07882 L-fucose isomerase, second N-terminal domain ILQ34_05200 PF07881 L-fucose isomerase, first N-terminal domain ILQ34_05205 PF07690 Major Facilitator Superfamily ILQ34_05210 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ34_05215 PF00465 Iron-containing alcohol dehydrogenase ILQ34_05220 PF01367 5'-3' exonuclease, C-terminal SAM fold ILQ34_05220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ILQ34_05225 PF03313 Serine dehydratase alpha chain ILQ34_05225 PF03315 Serine dehydratase beta chain ILQ34_05235 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ILQ34_05235 PF11892 Domain of unknown function (DUF3412) ILQ34_05235 PF03641 Possible lysine decarboxylase ILQ34_05240 PF14489 QueF-like protein ILQ34_05240 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ILQ34_05245 PF07348 Syd protein (SUKH-2) ILQ34_05250 PF04287 tRNA pseudouridine synthase C ILQ34_05255 PF00849 RNA pseudouridylate synthase ILQ34_05260 PF00258 Flavodoxin ILQ34_05265 PF07690 Major Facilitator Superfamily ILQ34_05275 PF13378 Enolase C-terminal domain-like ILQ34_05280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ILQ34_05280 PF00072 Response regulator receiver domain ILQ34_05280 PF01627 Hpt domain ILQ34_05280 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_05280 PF00672 HAMP domain ILQ34_05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_05285 PF05958 tRNA (Uracil-5-)-methyltransferase ILQ34_05285 PF01938 TRAM domain ILQ34_05290 PF13291 ACT domain ILQ34_05290 PF04607 Region found in RelA / SpoT proteins ILQ34_05290 PF02824 TGS domain ILQ34_05295 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ILQ34_05300 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ILQ34_05305 PF03819 MazG nucleotide pyrophosphohydrolase domain ILQ34_05310 PF06418 CTP synthase N-terminus ILQ34_05310 PF00117 Glutamine amidotransferase class-I ILQ34_05315 PF00113 Enolase, C-terminal TIM barrel domain ILQ34_05315 PF03952 Enolase, N-terminal domain ILQ34_05320 PF04536 TPM domain ILQ34_05330 PF04536 TPM domain ILQ34_05340 PF04055 Radical SAM superfamily ILQ34_05345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ34_05345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ34_05350 PF07690 Major Facilitator Superfamily ILQ34_05360 PF01565 FAD binding domain ILQ34_05360 PF02913 FAD linked oxidases, C-terminal domain ILQ34_05370 PF01012 Electron transfer flavoprotein domain ILQ34_05380 PF04309 Glycerol-3-phosphate responsive antiterminator ILQ34_05390 PF01266 FAD dependent oxidoreductase ILQ34_05395 PF01242 6-pyruvoyl tetrahydropterin synthase ILQ34_05400 PF00667 FAD binding domain ILQ34_05400 PF00258 Flavodoxin ILQ34_05400 PF00175 Oxidoreductase NAD-binding domain ILQ34_05405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ILQ34_05405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ILQ34_05410 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ34_05415 PF01848 Hok/gef family ILQ34_05420 PF18019 HD domain ILQ34_05420 PF00271 Helicase conserved C-terminal domain ILQ34_05420 PF00270 DEAD/DEAH box helicase ILQ34_05425 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) ILQ34_05435 PF09344 CT1975-like protein ILQ34_05440 PF09704 CRISPR-associated protein (Cas_Cas5) ILQ34_05450 PF01867 CRISPR associated protein Cas1 ILQ34_05455 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) ILQ34_05460 PF04389 Peptidase family M28 ILQ34_05465 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ34_05470 PF00009 Elongation factor Tu GTP binding domain ILQ34_05480 PF12084 Protein of unknown function (DUF3561) ILQ34_05485 PF04977 Septum formation initiator ILQ34_05490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ILQ34_05495 PF02542 YgbB family ILQ34_05500 PF01142 tRNA pseudouridine synthase D (TruD) ILQ34_05505 PF01975 Survival protein SurE ILQ34_05515 PF01476 LysM domain ILQ34_05515 PF01551 Peptidase family M23 ILQ34_05520 PF04542 Sigma-70 region 2 ILQ34_05520 PF00140 Sigma-70 factor, region 1.2 ILQ34_05520 PF04545 Sigma-70, region 4 ILQ34_05520 PF04539 Sigma-70 region 3 ILQ34_05525 PF01047 MarR family ILQ34_05530 PF02441 Flavoprotein ILQ34_05535 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ILQ34_05545 PF00149 Calcineurin-like phosphoesterase ILQ34_05550 PF05188 MutS domain II ILQ34_05550 PF05192 MutS domain III ILQ34_05550 PF00488 MutS domain V ILQ34_05550 PF05190 MutS family domain IV ILQ34_05550 PF01624 MutS domain I ILQ34_05560 PF11756 Nitrous oxide-stimulated promoter ILQ34_05565 PF01590 GAF domain ILQ34_05565 PF00158 Sigma-54 interaction domain ILQ34_05570 PF02769 AIR synthase related protein, C-terminal domain ILQ34_05570 PF00586 AIR synthase related protein, N-terminal domain ILQ34_05575 PF01924 Hydrogenase formation hypA family ILQ34_05580 PF01455 HupF/HypC family ILQ34_05585 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ34_05590 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ILQ34_05595 PF11046 Transcriptional repressor of hyc and hyp operons ILQ34_05600 PF13247 4Fe-4S dicluster domain ILQ34_05605 PF00361 Proton-conducting membrane transporter ILQ34_05610 PF00146 NADH dehydrogenase ILQ34_05615 PF00374 Nickel-dependent hydrogenase ILQ34_05615 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILQ34_05615 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILQ34_05620 PF12838 4Fe-4S dicluster domain ILQ34_05625 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ34_05630 PF07450 Formate hydrogenlyase maturation protein HycH ILQ34_05635 PF01750 Hydrogenase maturation protease ILQ34_05640 PF00232 Glycosyl hydrolase family 1 ILQ34_05645 PF00367 phosphotransferase system, EIIB ILQ34_05645 PF02378 Phosphotransferase system, EIIC ILQ34_05650 PF00356 Bacterial regulatory proteins, lacI family ILQ34_05655 PF13247 4Fe-4S dicluster domain ILQ34_05655 PF12800 4Fe-4S binding domain ILQ34_05660 PF17788 HypF Kae1-like domain ILQ34_05660 PF07503 HypF finger ILQ34_05660 PF01300 Telomere recombination ILQ34_05660 PF00708 Acylphosphatase ILQ34_05665 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_05665 PF18113 Rubredoxin binding C-terminal domain ILQ34_05670 PF00301 Rubredoxin ILQ34_05670 PF00753 Metallo-beta-lactamase superfamily ILQ34_05670 PF00258 Flavodoxin ILQ34_05675 PF00158 Sigma-54 interaction domain ILQ34_05675 PF01590 GAF domain ILQ34_05680 PF00571 CBS domain ILQ34_05680 PF01380 SIS domain ILQ34_05685 PF08220 DeoR-like helix-turn-helix domain ILQ34_05685 PF00455 DeoR C terminal sensor domain ILQ34_05690 PF06923 Glucitol operon activator protein (GutM) ILQ34_05695 PF00106 short chain dehydrogenase ILQ34_05700 PF03829 PTS system glucitol/sorbitol-specific IIA component ILQ34_05715 PF13406 Transglycosylase SLT domain ILQ34_05720 PF02464 Competence-damaged protein ILQ34_05725 PF00154 recA bacterial DNA recombination protein ILQ34_05730 PF02631 RecX family ILQ34_05735 PF01411 tRNA synthetases class II (A) ILQ34_05735 PF02272 DHHA1 domain ILQ34_05735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILQ34_05740 PF02599 Global regulator protein family ILQ34_05770 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_05775 PF09335 SNARE associated Golgi protein ILQ34_05780 PF04262 Glutamate-cysteine ligase ILQ34_05785 PF02664 S-Ribosylhomocysteinase (LuxS) ILQ34_05790 PF07690 Major Facilitator Superfamily ILQ34_05795 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_05795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_05800 PF01047 MarR family ILQ34_05805 PF05437 Branched-chain amino acid transport protein (AzlD) ILQ34_05810 PF03591 AzlC protein ILQ34_05815 PF07690 Major Facilitator Superfamily ILQ34_05820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILQ34_05825 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_05830 PF00005 ABC transporter ILQ34_05830 PF00571 CBS domain ILQ34_05835 PF00268 Ribonucleotide reductase, small chain ILQ34_05840 PF02867 Ribonucleotide reductase, barrel domain ILQ34_05840 PF00317 Ribonucleotide reductase, all-alpha domain ILQ34_05840 PF08343 Ribonucleotide reductase N-terminal ILQ34_05845 PF07972 NrdI Flavodoxin like ILQ34_05850 PF00462 Glutaredoxin ILQ34_05855 PF02627 Carboxymuconolactone decarboxylase family ILQ34_05860 PF00155 Aminotransferase class I and II ILQ34_05860 PF00392 Bacterial regulatory proteins, gntR family ILQ34_05865 PF05957 Bacterial protein of unknown function (DUF883) ILQ34_05870 PF09400 Protein of unknown function (DUF2002) ILQ34_05875 PF06610 L-alanine exporter ILQ34_05880 PF00816 H-NS histone family ILQ34_05885 PF00581 Rhodanese-like domain ILQ34_05885 PF11127 Protein of unknown function (DUF2892) ILQ34_05890 PF01022 Bacterial regulatory protein, arsR family ILQ34_05895 PF01679 Proteolipid membrane potential modulator ILQ34_05900 PF04972 BON domain ILQ34_05900 PF01476 LysM domain ILQ34_05905 PF07729 FCD domain ILQ34_05905 PF00392 Bacterial regulatory proteins, gntR family ILQ34_05910 PF00324 Amino acid permease ILQ34_05915 PF00202 Aminotransferase class-III ILQ34_05920 PF00171 Aldehyde dehydrogenase family ILQ34_05925 PF01266 FAD dependent oxidoreductase ILQ34_05930 PF08943 CsiD ILQ34_05950 PF00239 Resolvase, N terminal domain ILQ34_05950 PF02796 Helix-turn-helix domain of resolvase ILQ34_06030 PF00149 Calcineurin-like phosphoesterase ILQ34_06050 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_06055 PF04971 Bacteriophage P21 holin S ILQ34_06060 PF07041 Protein of unknown function (DUF1327) ILQ34_06075 PF05717 IS66 Orf2 like protein ILQ34_06125 PF06183 DinI-like family ILQ34_06135 PF01668 SmpB protein ILQ34_06140 PF03364 Polyketide cyclase / dehydrase and lipid transport ILQ34_06145 PF03658 RnfH family Ubiquitin ILQ34_06150 PF04355 SmpA / OmlA family ILQ34_06155 PF02463 RecF/RecN/SMC N terminal domain ILQ34_06160 PF01513 ATP-NAD kinase ILQ34_06165 PF01025 GrpE ILQ34_06170 PF00571 CBS domain ILQ34_06170 PF03471 Transporter associated domain ILQ34_06170 PF01595 Cyclin M transmembrane N-terminal domain ILQ34_06175 PF01578 Cytochrome C assembly protein ILQ34_06180 PF02881 SRP54-type protein, helical bundle domain ILQ34_06180 PF00448 SRP54-type protein, GTPase domain ILQ34_06180 PF02978 Signal peptide binding domain ILQ34_06185 PF00886 Ribosomal protein S16 ILQ34_06190 PF01782 RimM N-terminal domain ILQ34_06190 PF05239 PRC-barrel domain ILQ34_06195 PF01746 tRNA (Guanine-1)-methyltransferase ILQ34_06200 PF01245 Ribosomal protein L19 ILQ34_06205 PF00691 OmpA family ILQ34_06210 PF17152 Periplasmic sensor domain ILQ34_06210 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_06215 PF13689 YfiR/HmsC-like ILQ34_06220 PF10973 Protein of unknown function (DUF2799) ILQ34_06225 PF00793 DAHP synthetase I family ILQ34_06230 PF01817 Chorismate mutase type II ILQ34_06230 PF02153 Prephenate dehydrogenase ILQ34_06235 PF00800 Prephenate dehydratase ILQ34_06235 PF01817 Chorismate mutase type II ILQ34_06245 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ILQ34_06250 PF13525 Outer membrane lipoprotein ILQ34_06255 PF00849 RNA pseudouridylate synthase ILQ34_06255 PF01479 S4 domain ILQ34_06260 PF02578 Multi-copper polyphenol oxidoreductase laccase ILQ34_06265 PF17871 AAA lid domain ILQ34_06265 PF02861 Clp amino terminal domain, pathogenicity island component ILQ34_06265 PF07724 AAA domain (Cdc48 subfamily) ILQ34_06265 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ34_06265 PF00004 ATPase family associated with various cellular activities (AAA) ILQ34_06290 PF00083 Sugar (and other) transporter ILQ34_06295 PF10043 Predicted periplasmic lipoprotein (DUF2279) ILQ34_06300 PF13091 PLD-like domain ILQ34_06305 PF13607 Succinyl-CoA ligase like flavodoxin domain ILQ34_06305 PF13380 CoA binding domain ILQ34_06305 PF00583 Acetyltransferase (GNAT) family ILQ34_06310 PF03942 DTW domain ILQ34_06315 PF00085 Thioredoxin ILQ34_06320 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILQ34_06320 PF00588 SpoU rRNA Methylase family ILQ34_06325 PF03167 Uracil DNA glycosylase superfamily ILQ34_06330 PF01228 Glycine radical ILQ34_06335 PF01810 LysE type translocator ILQ34_06340 PF03466 LysR substrate binding domain ILQ34_06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_06345 PF00271 Helicase conserved C-terminal domain ILQ34_06345 PF00270 DEAD/DEAH box helicase ILQ34_06350 PF05175 Methyltransferase small domain ILQ34_06355 PF00890 FAD binding domain ILQ34_06355 PF02910 Fumarate reductase flavoprotein C-term ILQ34_06365 PF04542 Sigma-70 region 2 ILQ34_06365 PF08281 Sigma-70, region 4 ILQ34_06370 PF03873 Anti sigma-E protein RseA, C-terminal domain ILQ34_06370 PF03872 Anti sigma-E protein RseA, N-terminal domain ILQ34_06375 PF17188 MucB/RseB C-terminal domain ILQ34_06375 PF03888 MucB/RseB N-terminal domain ILQ34_06385 PF06421 GTP-binding protein LepA C-terminus ILQ34_06385 PF00679 Elongation factor G C-terminus ILQ34_06385 PF00009 Elongation factor Tu GTP binding domain ILQ34_06385 PF03144 Elongation factor Tu domain 2 ILQ34_06390 PF10502 Signal peptidase, peptidase S26 ILQ34_06395 PF14622 Ribonuclease-III-like ILQ34_06395 PF00035 Double-stranded RNA binding motif ILQ34_06400 PF07650 KH domain ILQ34_06400 PF01926 50S ribosome-binding GTPase ILQ34_06405 PF02565 Recombination protein O C terminal ILQ34_06405 PF11967 Recombination protein O N terminal ILQ34_06410 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ILQ34_06415 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ34_06425 PF12838 4Fe-4S dicluster domain ILQ34_06430 PF01380 SIS domain ILQ34_06430 PF01418 Helix-turn-helix domain, rpiR family ILQ34_06440 PF14437 MafB19-like deaminase ILQ34_06445 PF01464 Transglycosylase SLT domain ILQ34_06445 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_06450 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ILQ34_06450 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ILQ34_06450 PF02769 AIR synthase related protein, C-terminal domain ILQ34_06455 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_06460 PF13942 YfhG lipoprotein ILQ34_06465 PF00072 Response regulator receiver domain ILQ34_06465 PF00158 Sigma-54 interaction domain ILQ34_06470 PF00543 Nitrogen regulatory protein P-II ILQ34_06475 PF00970 Oxidoreductase FAD-binding domain ILQ34_06475 PF00042 Globin ILQ34_06475 PF00175 Oxidoreductase NAD-binding domain ILQ34_06480 PF00464 Serine hydroxymethyltransferase ILQ34_06485 PF00480 ROK family ILQ34_06490 PF17128 Domain of unknown function (DUF5107) ILQ34_06490 PF13181 Tetratricopeptide repeat ILQ34_06495 PF13407 Periplasmic binding protein domain ILQ34_06500 PF00005 ABC transporter ILQ34_06505 PF02653 Branched-chain amino acid transport system / permease component ILQ34_06510 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_06510 PF00107 Zinc-binding dehydrogenase ILQ34_06515 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_06515 PF00107 Zinc-binding dehydrogenase ILQ34_06520 PF01263 Aldose 1-epimerase ILQ34_06525 PF07681 DoxX ILQ34_06530 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_06530 PF14759 Reductase C-terminal ILQ34_06535 PF00106 short chain dehydrogenase ILQ34_06540 PF00355 Rieske [2Fe-2S] domain ILQ34_06545 PF00866 Ring hydroxylating beta subunit ILQ34_06550 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILQ34_06550 PF00355 Rieske [2Fe-2S] domain ILQ34_06555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_06555 PF03466 LysR substrate binding domain ILQ34_06560 PF12832 MFS_1 like family ILQ34_06565 PF00874 PRD domain ILQ34_06570 PF12146 Serine aminopeptidase, S33 ILQ34_06575 PF00459 Inositol monophosphatase family ILQ34_06580 PF00588 SpoU rRNA Methylase family ILQ34_06585 PF02082 Transcriptional regulator ILQ34_06590 PF00266 Aminotransferase class-V ILQ34_06595 PF01592 NifU-like N terminal domain ILQ34_06600 PF01521 Iron-sulphur cluster biosynthesis ILQ34_06605 PF07743 HSCB C-terminal oligomerisation domain ILQ34_06610 PF00012 Hsp70 protein ILQ34_06615 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ34_06620 PF04384 Iron-sulphur cluster assembly ILQ34_06625 PF00883 Cytosol aminopeptidase family, catalytic domain ILQ34_06625 PF12404 Peptidase ILQ34_06630 PF07179 SseB protein N-terminal domain ILQ34_06630 PF14581 SseB protein C-terminal domain ILQ34_06635 PF00581 Rhodanese-like domain ILQ34_06640 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ILQ34_06640 PF01835 MG2 domain ILQ34_06640 PF17962 Bacterial macroglobulin domain 6 ILQ34_06640 PF07678 A-macroglobulin TED domain ILQ34_06640 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ILQ34_06640 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ILQ34_06640 PF07703 Alpha-2-macroglobulin bait region domain ILQ34_06640 PF00207 Alpha-2-macroglobulin family ILQ34_06640 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ILQ34_06645 PF00912 Transglycosylase ILQ34_06645 PF00905 Penicillin binding protein transpeptidase domain ILQ34_06645 PF06832 Penicillin-Binding Protein C-terminus Family ILQ34_06650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ34_06650 PF01568 Molydopterin dinucleotide binding domain ILQ34_06650 PF00384 Molybdopterin oxidoreductase ILQ34_06655 PF12800 4Fe-4S binding domain ILQ34_06655 PF13247 4Fe-4S dicluster domain ILQ34_06660 PF04976 DMSO reductase anchor subunit (DmsC) ILQ34_06670 PF00334 Nucleoside diphosphate kinase ILQ34_06675 PF04055 Radical SAM superfamily ILQ34_06680 PF13464 Domain of unknown function (DUF4115) ILQ34_06685 PF04551 GcpE protein ILQ34_06690 PF13393 Histidyl-tRNA synthetase ILQ34_06690 PF03129 Anticodon binding domain ILQ34_06695 PF09976 Tetratricopeptide repeat-like domain ILQ34_06700 PF13360 PQQ-like domain ILQ34_06705 PF01926 50S ribosome-binding GTPase ILQ34_06705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ILQ34_06710 PF07191 zinc-ribbons ILQ34_06715 PF02601 Exonuclease VII, large subunit ILQ34_06715 PF13742 OB-fold nucleic acid binding domain ILQ34_06720 PF00478 IMP dehydrogenase / GMP reductase domain ILQ34_06720 PF00571 CBS domain ILQ34_06725 PF02540 NAD synthase ILQ34_06725 PF00117 Glutamine amidotransferase class-I ILQ34_06725 PF00958 GMP synthase C terminal domain ILQ34_06730 PF17358 Family of unknown function (DUF5384) ILQ34_06735 PF05433 Glycine zipper 2TM domain ILQ34_06740 PF11119 Protein of unknown function (DUF2633) ILQ34_06750 PF05231 MASE1 ILQ34_06750 PF00563 EAL domain ILQ34_06755 PF02541 Ppx/GppA phosphatase family ILQ34_06760 PF17941 Polyphosphate kinase C-terminal domain 1 ILQ34_06760 PF13089 Polyphosphate kinase N-terminal domain ILQ34_06760 PF02503 Polyphosphate kinase middle domain ILQ34_06760 PF13090 Polyphosphate kinase C-terminal domain 2 ILQ34_06765 PF00551 Formyl transferase ILQ34_06770 PF02769 AIR synthase related protein, C-terminal domain ILQ34_06770 PF00586 AIR synthase related protein, N-terminal domain ILQ34_06780 PF00860 Permease family ILQ34_06785 PF00308 Bacterial dnaA protein ILQ34_06790 PF03960 ArsC family ILQ34_06795 PF01435 Peptidase family M48 ILQ34_06800 PF01594 AI-2E family transporter ILQ34_06805 PF01226 Formate/nitrite transporter ILQ34_06810 PF01590 GAF domain ILQ34_06810 PF00158 Sigma-54 interaction domain ILQ34_06815 PF07450 Formate hydrogenlyase maturation protein HycH ILQ34_06820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ34_06825 PF12838 4Fe-4S dicluster domain ILQ34_06830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILQ34_06830 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILQ34_06830 PF00374 Nickel-dependent hydrogenase ILQ34_06835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILQ34_06835 PF00361 Proton-conducting membrane transporter ILQ34_06840 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILQ34_06845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILQ34_06845 PF00361 Proton-conducting membrane transporter ILQ34_06850 PF00146 NADH dehydrogenase ILQ34_06860 PF12798 4Fe-4S binding domain ILQ34_06860 PF00037 4Fe-4S binding domain ILQ34_06865 PF00578 AhpC/TSA family ILQ34_06870 PF01842 ACT domain ILQ34_06875 PF00701 Dihydrodipicolinate synthetase family ILQ34_06880 PF06804 NlpB/DapX lipoprotein ILQ34_06885 PF01259 SAICAR synthetase ILQ34_06890 PF04228 Putative neutral zinc metallopeptidase ILQ34_06895 PF05127 Helicase ILQ34_06895 PF17176 tRNA-binding domain ILQ34_06895 PF08351 Domain of unknown function (DUF1726) ILQ34_06895 PF13718 GNAT acetyltransferase 2 ILQ34_06900 PF02230 Phospholipase/Carboxylesterase ILQ34_06905 PF13980 Uncharacterised protein family (UPF0370) ILQ34_06910 PF07687 Peptidase dimerisation domain ILQ34_06910 PF01546 Peptidase family M20/M25/M40 ILQ34_06915 PF03960 ArsC family ILQ34_06925 PF00873 AcrB/AcrD/AcrF family ILQ34_06930 PF07730 Histidine kinase ILQ34_06930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_06930 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ILQ34_06930 PF00672 HAMP domain ILQ34_06935 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_06935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ34_06935 PF13247 4Fe-4S dicluster domain ILQ34_06940 PF00293 NUDIX domain ILQ34_06945 PF06674 Protein of unknown function (DUF1176) ILQ34_06950 PF02780 Transketolase, C-terminal domain ILQ34_06950 PF00456 Transketolase, thiamine diphosphate binding domain ILQ34_06950 PF02779 Transketolase, pyrimidine binding domain ILQ34_06955 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ34_06960 PF01515 Phosphate acetyl/butaryl transferase ILQ34_06960 PF00390 Malic enzyme, N-terminal domain ILQ34_06960 PF03949 Malic enzyme, NAD binding domain ILQ34_06965 PF00936 BMC domain ILQ34_06970 PF10662 Ethanolamine utilisation - propanediol utilisation ILQ34_06975 PF06249 Ethanolamine utilisation protein EutQ ILQ34_06980 PF01923 Cobalamin adenosyltransferase ILQ34_06985 PF01515 Phosphate acetyl/butaryl transferase ILQ34_06990 PF00936 BMC domain ILQ34_06995 PF03319 Ethanolamine utilisation protein EutN/carboxysome ILQ34_07000 PF00171 Aldehyde dehydrogenase family ILQ34_07010 PF00465 Iron-containing alcohol dehydrogenase ILQ34_07015 PF04346 Ethanolamine utilisation protein, EutH ILQ34_07020 PF06277 Ethanolamine utilisation protein EutA ILQ34_07025 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ILQ34_07030 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ILQ34_07035 PF00936 BMC domain ILQ34_07040 PF00936 BMC domain ILQ34_07040 PF16365 Ethanolamine utilization protein EutK C-terminus ILQ34_07045 PF12833 Helix-turn-helix domain ILQ34_07050 PF01218 Coproporphyrinogen III oxidase ILQ34_07055 PF01520 N-acetylmuramoyl-L-alanine amidase ILQ34_07060 PF00583 Acetyltransferase (GNAT) family ILQ34_07065 PF11143 Protein of unknown function (DUF2919) ILQ34_07070 PF06572 Protein of unknown function (DUF1131) ILQ34_07075 PF04261 Dyp-type peroxidase family ILQ34_07080 PF00144 Beta-lactamase ILQ34_07085 PF02378 Phosphotransferase system, EIIC ILQ34_07085 PF00367 phosphotransferase system, EIIB ILQ34_07090 PF01380 SIS domain ILQ34_07095 PF01380 SIS domain ILQ34_07095 PF01418 Helix-turn-helix domain, rpiR family ILQ34_07110 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_07115 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_07120 PF00005 ABC transporter ILQ34_07125 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_07135 PF08543 Phosphomethylpyrimidine kinase ILQ34_07140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ILQ34_07145 PF00391 PEP-utilising enzyme, mobile domain ILQ34_07145 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ34_07145 PF05524 PEP-utilising enzyme, N-terminal ILQ34_07150 PF00381 PTS HPr component phosphorylation site ILQ34_07155 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_07165 PF04354 ZipA, C-terminal FtsZ-binding domain ILQ34_07170 PF01653 NAD-dependent DNA ligase adenylation domain ILQ34_07170 PF00533 BRCA1 C Terminus (BRCT) domain ILQ34_07170 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ILQ34_07170 PF12826 Helix-hairpin-helix motif ILQ34_07170 PF03120 NAD-dependent DNA ligase OB-fold domain ILQ34_07175 PF12843 Putative quorum-sensing-regulated virulence factor ILQ34_07180 PF13593 SBF-like CPA transporter family (DUF4137) ILQ34_07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_07185 PF03466 LysR substrate binding domain ILQ34_07215 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILQ34_07230 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_07230 PF13817 IS66 C-terminal element ILQ34_07230 PF03050 Transposase IS66 family ILQ34_07230 PF13007 Transposase C of IS166 homeodomain ILQ34_07235 PF05717 IS66 Orf2 like protein ILQ34_07250 PF07037 Putative transcription regulator (DUF1323) ILQ34_07255 PF07037 Putative transcription regulator (DUF1323) ILQ34_07270 PF05231 MASE1 ILQ34_07270 PF00563 EAL domain ILQ34_07275 PF07670 Nucleoside recognition ILQ34_07275 PF01773 Na+ dependent nucleoside transporter N-terminus ILQ34_07275 PF07662 Na+ dependent nucleoside transporter C-terminus ILQ34_07280 PF01566 Natural resistance-associated macrophage protein ILQ34_07285 PF10697 Protein of unknown function (DUF2502) ILQ34_07290 PF00654 Voltage gated chloride channel ILQ34_07295 PF02685 Glucokinase ILQ34_07300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_07305 PF02378 Phosphotransferase system, EIIC ILQ34_07310 PF01321 Creatinase/Prolidase N-terminal domain ILQ34_07310 PF00557 Metallopeptidase family M24 ILQ34_07315 PF05343 M42 glutamyl aminopeptidase ILQ34_07320 PF05524 PEP-utilising enzyme, N-terminal ILQ34_07320 PF00391 PEP-utilising enzyme, mobile domain ILQ34_07320 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ34_07320 PF00381 PTS HPr component phosphorylation site ILQ34_07320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_07325 PF12833 Helix-turn-helix domain ILQ34_07330 PF00072 Response regulator receiver domain ILQ34_07330 PF04397 LytTr DNA-binding domain ILQ34_07335 PF06580 Histidine kinase ILQ34_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_07335 PF07694 5TMR of 5TMR-LYT ILQ34_07340 PF00155 Aminotransferase class I and II ILQ34_07350 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ34_07355 PF10810 Protein of unknown function (DUF2545) ILQ34_07365 PF10938 YfdX protein ILQ34_07370 PF02515 CoA-transferase family III ILQ34_07375 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ34_07375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_07375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ34_07380 PF03547 Membrane transport protein ILQ34_07390 PF13007 Transposase C of IS166 homeodomain ILQ34_07390 PF13817 IS66 C-terminal element ILQ34_07390 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_07390 PF03050 Transposase IS66 family ILQ34_07395 PF05717 IS66 Orf2 like protein ILQ34_07410 PF00072 Response regulator receiver domain ILQ34_07410 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_07410 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_07415 PF00196 Bacterial regulatory proteins, luxR family ILQ34_07415 PF00072 Response regulator receiver domain ILQ34_07420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_07420 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_07425 PF07690 Major Facilitator Superfamily ILQ34_07430 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_07440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ34_07440 PF00356 Bacterial regulatory proteins, lacI family ILQ34_07445 PF08244 Glycosyl hydrolases family 32 C terminal ILQ34_07445 PF00251 Glycosyl hydrolases family 32 N-terminal domain ILQ34_07450 PF00294 pfkB family carbohydrate kinase ILQ34_07455 PF01306 LacY proton/sugar symporter ILQ34_07460 PF00239 Resolvase, N terminal domain ILQ34_07460 PF02796 Helix-turn-helix domain of resolvase ILQ34_07500 PF14659 Phage integrase, N-terminal SAM-like domain ILQ34_07500 PF13356 Arm DNA-binding domain ILQ34_07500 PF00589 Phage integrase family ILQ34_07630 PF03793 PASTA domain ILQ34_07630 PF00069 Protein kinase domain ILQ34_07720 PF06530 Phage antitermination protein Q ILQ34_07740 PF00161 Ribosome inactivating protein ILQ34_07745 PF02258 Shiga-like toxin beta subunit ILQ34_07750 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_07765 PF04971 Bacteriophage P21 holin S ILQ34_07770 PF00959 Phage lysozyme ILQ34_07785 PF06085 Lipoprotein Rz1 precursor ILQ34_07790 PF06291 Bor protein ILQ34_07885 PF13505 Outer membrane protein beta-barrel domain ILQ34_07925 PF01226 Formate/nitrite transporter ILQ34_07930 PF04333 MlaA lipoprotein ILQ34_07940 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ILQ34_07945 PF04175 Protein of unknown function (DUF406) ILQ34_07950 PF00108 Thiolase, N-terminal domain ILQ34_07950 PF02803 Thiolase, C-terminal domain ILQ34_07955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILQ34_07955 PF00378 Enoyl-CoA hydratase/isomerase ILQ34_07955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILQ34_07960 PF00300 Histidine phosphatase superfamily (branch 1) ILQ34_07965 PF00419 Fimbrial protein ILQ34_07970 PF00577 Outer membrane usher protein ILQ34_07970 PF13953 PapC C-terminal domain ILQ34_07970 PF13954 PapC N-terminal domain ILQ34_07975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_07975 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_07980 PF00419 Fimbrial protein ILQ34_07985 PF00419 Fimbrial protein ILQ34_07990 PF00419 Fimbrial protein ILQ34_07995 PF11245 Protein of unknown function (DUF2544) ILQ34_08000 PF01713 Smr domain ILQ34_08005 PF05175 Methyltransferase small domain ILQ34_08010 PF01264 Chorismate synthase ILQ34_08015 PF03411 Penicillin-insensitive murein endopeptidase ILQ34_08020 PF01925 Sulfite exporter TauE/SafE ILQ34_08025 PF04315 Elongation factor P hydroxylase ILQ34_08030 PF08891 YfcL protein ILQ34_08035 PF01266 FAD dependent oxidoreductase ILQ34_08035 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ILQ34_08040 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ34_08040 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ34_08045 PF07690 Major Facilitator Superfamily ILQ34_08055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ34_08055 PF11890 Domain of unknown function (DUF3410) ILQ34_08055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ34_08060 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILQ34_08060 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ34_08065 PF01416 tRNA pseudouridine synthase ILQ34_08070 PF09335 SNARE associated Golgi protein ILQ34_08075 PF17848 Acetyl-coA carboxylase zinc finger domain ILQ34_08075 PF01039 Carboxyl transferase domain ILQ34_08080 PF02875 Mur ligase family, glutamate ligase domain ILQ34_08080 PF08245 Mur ligase middle domain ILQ34_08085 PF05036 Sporulation related domain ILQ34_08090 PF02674 Colicin V production protein ILQ34_08095 PF00156 Phosphoribosyl transferase domain ILQ34_08100 PF02441 Flavoprotein ILQ34_08105 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_08110 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_08115 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_08120 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_08125 PF00005 ABC transporter ILQ34_08130 PF04754 Putative transposase, YhgA-like ILQ34_08135 PF08338 Domain of unknown function (DUF1731) ILQ34_08135 PF01370 NAD dependent epimerase/dehydratase family ILQ34_08140 PF02152 Dihydroneopterin aldolase ILQ34_08145 PF00043 Glutathione S-transferase, C-terminal domain ILQ34_08145 PF02798 Glutathione S-transferase, N-terminal domain ILQ34_08150 PF14834 Glutathione S-transferase, C-terminal domain ILQ34_08150 PF02798 Glutathione S-transferase, N-terminal domain ILQ34_08155 PF12850 Calcineurin-like phosphoesterase superfamily domain ILQ34_08160 PF00293 NUDIX domain ILQ34_08165 PF03606 C4-dicarboxylate anaerobic carrier ILQ34_08170 PF07085 DRTGG domain ILQ34_08170 PF01515 Phosphate acetyl/butaryl transferase ILQ34_08175 PF00871 Acetokinase family ILQ34_08180 PF04217 Protein of unknown function, DUF412 ILQ34_08185 PF03887 YfbU domain ILQ34_08190 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_08195 PF02080 TrkA-C domain ILQ34_08195 PF03600 Citrate transporter ILQ34_08205 PF00155 Aminotransferase class I and II ILQ34_08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_08210 PF03466 LysR substrate binding domain ILQ34_08215 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ILQ34_08220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ34_08225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ILQ34_08225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ILQ34_08235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ILQ34_08235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ILQ34_08235 PF10531 SLBB domain ILQ34_08240 PF00384 Molybdopterin oxidoreductase ILQ34_08240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ34_08240 PF01568 Molydopterin dinucleotide binding domain ILQ34_08240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ILQ34_08245 PF00146 NADH dehydrogenase ILQ34_08250 PF12838 4Fe-4S dicluster domain ILQ34_08255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ILQ34_08260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ILQ34_08265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ILQ34_08265 PF00361 Proton-conducting membrane transporter ILQ34_08270 PF00361 Proton-conducting membrane transporter ILQ34_08275 PF00361 Proton-conducting membrane transporter ILQ34_08280 PF08974 Domain of unknown function (DUF1877) ILQ34_08290 PF02902 Ulp1 protease family, C-terminal catalytic domain ILQ34_08295 PF12706 Beta-lactamase superfamily domain ILQ34_08300 PF13673 Acetyltransferase (GNAT) domain ILQ34_08305 PF05957 Bacterial protein of unknown function (DUF883) ILQ34_08310 PF00425 chorismate binding enzyme ILQ34_08315 PF16582 Middle domain of thiamine pyrophosphate ILQ34_08315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_08315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ34_08320 PF12697 Alpha/beta hydrolase family ILQ34_08325 PF00378 Enoyl-CoA hydratase/isomerase ILQ34_08330 PF13378 Enolase C-terminal domain-like ILQ34_08335 PF00501 AMP-binding enzyme ILQ34_08335 PF13193 AMP-binding enzyme C-terminal domain ILQ34_08350 PF00892 EamA-like transporter family ILQ34_08355 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ILQ34_08360 PF01522 Polysaccharide deacetylase ILQ34_08365 PF02911 Formyl transferase, C-terminal domain ILQ34_08365 PF00551 Formyl transferase ILQ34_08365 PF01370 NAD dependent epimerase/dehydratase family ILQ34_08370 PF00535 Glycosyl transferase family 2 ILQ34_08375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILQ34_08380 PF00300 Histidine phosphatase superfamily (branch 1) ILQ34_08385 PF00293 NUDIX domain ILQ34_08390 PF07437 YfaZ precursor ILQ34_08395 PF00994 Probable molybdopterin binding domain ILQ34_08400 PF01614 Bacterial transcriptional regulator ILQ34_08400 PF09339 IclR helix-turn-helix domain ILQ34_08405 PF13378 Enolase C-terminal domain-like ILQ34_08405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ILQ34_08410 PF07690 Major Facilitator Superfamily ILQ34_08415 PF03328 HpcH/HpaI aldolase/citrate lyase family ILQ34_08420 PF04754 Putative transposase, YhgA-like ILQ34_08425 PF02754 Cysteine-rich domain ILQ34_08425 PF13183 4Fe-4S dicluster domain ILQ34_08430 PF00890 FAD binding domain ILQ34_08435 PF01266 FAD dependent oxidoreductase ILQ34_08435 PF04324 BFD-like [2Fe-2S] binding domain ILQ34_08440 PF07690 Major Facilitator Superfamily ILQ34_08445 PF03009 Glycerophosphoryl diester phosphodiesterase family ILQ34_08455 PF03466 LysR substrate binding domain ILQ34_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_08460 PF07690 Major Facilitator Superfamily ILQ34_08470 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ34_08475 PF00268 Ribonucleotide reductase, small chain ILQ34_08480 PF00317 Ribonucleotide reductase, all-alpha domain ILQ34_08480 PF03477 ATP cone domain ILQ34_08480 PF02867 Ribonucleotide reductase, barrel domain ILQ34_08485 PF12951 Passenger-associated-transport-repeat ILQ34_08485 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat ILQ34_08485 PF03797 Autotransporter beta-domain ILQ34_08495 PF03989 DNA gyrase C-terminal domain, beta-propeller ILQ34_08495 PF00521 DNA gyrase/topoisomerase IV, subunit A ILQ34_08500 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) ILQ34_08505 PF06672 Protein of unknown function (DUF1175) ILQ34_08515 PF10062 Predicted secreted protein (DUF2300) ILQ34_08515 PF08486 Stage II sporulation protein ILQ34_08520 PF10062 Predicted secreted protein (DUF2300) ILQ34_08520 PF08486 Stage II sporulation protein ILQ34_08525 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) ILQ34_08530 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_08530 PF00072 Response regulator receiver domain ILQ34_08530 PF09456 RcsC Alpha-Beta-Loop (ABL) ILQ34_08530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_08535 PF00072 Response regulator receiver domain ILQ34_08535 PF00196 Bacterial regulatory proteins, luxR family ILQ34_08540 PF16359 RcsD-ABL domain ILQ34_08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_08540 PF01627 Hpt domain ILQ34_08545 PF00267 Gram-negative porin ILQ34_08550 PF02424 ApbE family ILQ34_08555 PF12833 Helix-turn-helix domain ILQ34_08555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILQ34_08555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILQ34_08555 PF02805 Metal binding domain of Ada ILQ34_08560 PF13532 2OG-Fe(II) oxygenase superfamily ILQ34_08565 PF00005 ABC transporter ILQ34_08570 PF06039 Malate:quinone oxidoreductase (Mqo) ILQ34_08575 PF03974 Ecotin ILQ34_08580 PF12800 4Fe-4S binding domain ILQ34_08580 PF13187 4Fe-4S dicluster domain ILQ34_08580 PF00037 4Fe-4S binding domain ILQ34_08585 PF03927 NapD protein ILQ34_08590 PF00384 Molybdopterin oxidoreductase ILQ34_08590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ34_08590 PF01568 Molydopterin dinucleotide binding domain ILQ34_08595 PF12838 4Fe-4S dicluster domain ILQ34_08595 PF12800 4Fe-4S binding domain ILQ34_08600 PF12801 4Fe-4S binding domain ILQ34_08600 PF13237 4Fe-4S dicluster domain ILQ34_08605 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ILQ34_08610 PF03264 NapC/NirT cytochrome c family, N-terminal region ILQ34_08615 PF00005 ABC transporter ILQ34_08620 PF03379 CcmB protein ILQ34_08625 PF01578 Cytochrome C assembly protein ILQ34_08630 PF04995 Heme exporter protein D (CcmD) ILQ34_08635 PF03100 CcmE ILQ34_08640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ILQ34_08640 PF01578 Cytochrome C assembly protein ILQ34_08645 PF08534 Redoxin ILQ34_08650 PF03918 Cytochrome C biogenesis protein ILQ34_08655 PF00072 Response regulator receiver domain ILQ34_08655 PF00196 Bacterial regulatory proteins, luxR family ILQ34_08660 PF03212 Pertactin ILQ34_08660 PF03797 Autotransporter beta-domain ILQ34_08660 PF16168 Adhesin of bacterial autotransporter system, probable stalk ILQ34_08670 PF00884 Sulfatase ILQ34_08670 PF11893 Domain of unknown function (DUF3413) ILQ34_08675 PF07208 Protein of unknown function (DUF1414) ILQ34_08680 PF04245 37-kD nucleoid-associated bacterial protein ILQ34_08685 PF01386 Ribosomal L25p family ILQ34_08690 PF00271 Helicase conserved C-terminal domain ILQ34_08690 PF04851 Type III restriction enzyme, res subunit ILQ34_08695 PF01479 S4 domain ILQ34_08695 PF00849 RNA pseudouridylate synthase ILQ34_08700 PF07690 Major Facilitator Superfamily ILQ34_08705 PF13989 YejG-like protein ILQ34_08710 PF00005 ABC transporter ILQ34_08710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_08715 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_08715 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ34_08720 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_08725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_08730 PF12792 CSS motif domain associated with EAL ILQ34_08730 PF00563 EAL domain ILQ34_08735 PF00877 NlpC/P60 family ILQ34_08740 PF01569 PAP2 superfamily ILQ34_08745 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ34_08745 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILQ34_08750 PF01232 Mannitol dehydrogenase Rossmann domain ILQ34_08750 PF08125 Mannitol dehydrogenase C-terminal domain ILQ34_08755 PF09285 Elongation factor P, C-terminal ILQ34_08755 PF01132 Elongation factor P (EF-P) OB domain ILQ34_08755 PF08207 Elongation factor P (EF-P) KOW-like domain ILQ34_08760 PF03692 Putative zinc- or iron-chelating domain ILQ34_08765 PF07690 Major Facilitator Superfamily ILQ34_08770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_08770 PF00381 PTS HPr component phosphorylation site ILQ34_08775 PF00294 pfkB family carbohydrate kinase ILQ34_08780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_08780 PF02378 Phosphotransferase system, EIIC ILQ34_08785 PF00294 pfkB family carbohydrate kinase ILQ34_08790 PF04227 Indigoidine synthase A like protein ILQ34_08795 PF07662 Na+ dependent nucleoside transporter C-terminus ILQ34_08795 PF01773 Na+ dependent nucleoside transporter N-terminus ILQ34_08800 PF00027 Cyclic nucleotide-binding domain ILQ34_08805 PF01156 Inosine-uridine preferring nucleoside hydrolase ILQ34_08810 PF07662 Na+ dependent nucleoside transporter C-terminus ILQ34_08810 PF01773 Na+ dependent nucleoside transporter N-terminus ILQ34_08815 PF00294 pfkB family carbohydrate kinase ILQ34_08820 PF01261 Xylose isomerase-like TIM barrel ILQ34_08825 PF03601 Conserved hypothetical protein 698 ILQ34_08830 PF03466 LysR substrate binding domain ILQ34_08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_08835 PF00324 Amino acid permease ILQ34_08840 PF00593 TonB dependent receptor ILQ34_08840 PF07715 TonB-dependent Receptor Plug Domain ILQ34_08845 PF00756 Putative esterase ILQ34_08850 PF01227 GTP cyclohydrolase I ILQ34_08855 PF04235 Protein of unknown function (DUF418) ILQ34_08860 PF00356 Bacterial regulatory proteins, lacI family ILQ34_08865 PF13407 Periplasmic binding protein domain ILQ34_08870 PF00005 ABC transporter ILQ34_08875 PF02653 Branched-chain amino acid transport system / permease component ILQ34_08880 PF01180 Dihydroorotate dehydrogenase ILQ34_08885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ILQ34_08885 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_08890 PF10808 Protein of unknown function (DUF2542) ILQ34_08895 PF02698 DUF218 domain ILQ34_08900 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ILQ34_08900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILQ34_08905 PF04172 LrgB-like family ILQ34_08910 PF03788 LrgA family ILQ34_08915 PF03466 LysR substrate binding domain ILQ34_08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_08920 PF07690 Major Facilitator Superfamily ILQ34_08925 PF07883 Cupin domain ILQ34_08930 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILQ34_08935 PF02798 Glutathione S-transferase, N-terminal domain ILQ34_08935 PF14497 Glutathione S-transferase, C-terminal domain ILQ34_08940 PF01494 FAD binding domain ILQ34_08945 PF01207 Dihydrouridine synthase (Dus) ILQ34_08955 PF02321 Outer membrane efflux protein ILQ34_08965 PF09335 SNARE associated Golgi protein ILQ34_08970 PF04893 Yip1 domain ILQ34_08975 PF00768 D-alanyl-D-alanine carboxypeptidase ILQ34_08980 PF01565 FAD binding domain ILQ34_08980 PF09330 D-lactate dehydrogenase, membrane binding ILQ34_08985 PF01915 Glycosyl hydrolase family 3 C-terminal domain ILQ34_08985 PF14310 Fibronectin type III-like domain ILQ34_08985 PF00933 Glycosyl hydrolase family 3 N terminal domain ILQ34_08990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILQ34_08995 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_09000 PF00005 ABC transporter ILQ34_09005 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_09015 PF13411 MerR HTH family regulatory protein ILQ34_09020 PF12167 Arm DNA-binding domain ILQ34_09020 PF00589 Phage integrase family ILQ34_09105 PF00717 Peptidase S24-like ILQ34_09105 PF01381 Helix-turn-helix ILQ34_09125 PF06992 Replication protein P ILQ34_09170 PF07102 Protein of unknown function (DUF1364) ILQ34_09175 PF05866 Endodeoxyribonuclease RusA ILQ34_09185 PF06530 Phage antitermination protein Q ILQ34_09210 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_09225 PF04971 Bacteriophage P21 holin S ILQ34_09230 PF00959 Phage lysozyme ILQ34_09275 PF00574 Clp protease ILQ34_09345 PF06316 Enterobacterial Ail/Lom protein ILQ34_09350 PF08400 Prophage tail fibre N-terminal ILQ34_09350 PF07484 Phage Tail Collar Domain ILQ34_09350 PF03335 Phage tail fibre repeat ILQ34_09360 PF06183 DinI-like family ILQ34_09365 PF07694 5TMR of 5TMR-LYT ILQ34_09365 PF06580 Histidine kinase ILQ34_09370 PF04397 LytTr DNA-binding domain ILQ34_09370 PF00072 Response regulator receiver domain ILQ34_09375 PF07308 Protein of unknown function (DUF1456) ILQ34_09380 PF06998 Protein of unknown function (DUF1307) ILQ34_09385 PF04434 SWIM zinc finger ILQ34_09390 PF05762 VWA domain containing CoxE-like protein ILQ34_09405 PF07728 AAA domain (dynein-related subfamily) ILQ34_09415 PF13569 Domain of unknown function (DUF4132) ILQ34_09430 PF09334 tRNA synthetases class I (M) ILQ34_09430 PF01588 Putative tRNA binding domain ILQ34_09435 PF10609 NUBPL iron-transfer P-loop NTPase ILQ34_09440 PF10836 Protein of unknown function (DUF2574) ILQ34_09445 PF00419 Fimbrial protein ILQ34_09450 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_09450 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_09460 PF00419 Fimbrial protein ILQ34_09465 PF11776 Nickel/cobalt transporter regulator ILQ34_09470 PF03824 High-affinity nickel-transport protein ILQ34_09475 PF02583 Metal-sensitive transcriptional repressor ILQ34_09495 PF02110 Hydroxyethylthiazole kinase family ILQ34_09500 PF08543 Phosphomethylpyrimidine kinase ILQ34_09505 PF01183 Glycosyl hydrolases family 25 ILQ34_09510 PF00392 Bacterial regulatory proteins, gntR family ILQ34_09510 PF07702 UTRA domain ILQ34_09515 PF00294 pfkB family carbohydrate kinase ILQ34_09520 PF03747 ADP-ribosylglycohydrolase ILQ34_09525 PF03825 Nucleoside H+ symporter ILQ34_09530 PF01791 DeoC/LacD family aldolase ILQ34_09535 PF01116 Fructose-bisphosphate aldolase class-II ILQ34_09540 PF08013 Tagatose 6 phosphate kinase ILQ34_09545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_09550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_09555 PF03611 PTS system sugar-specific permease component ILQ34_09560 PF00107 Zinc-binding dehydrogenase ILQ34_09560 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_09565 PF08220 DeoR-like helix-turn-helix domain ILQ34_09570 PF00781 Diacylglycerol kinase catalytic domain ILQ34_09580 PF01136 Peptidase family U32 ILQ34_09580 PF16325 Peptidase family U32 C-terminal domain ILQ34_09585 PF07411 Domain of unknown function (DUF1508) ILQ34_09590 PF00072 Response regulator receiver domain ILQ34_09590 PF00486 Transcriptional regulatory protein, C terminal ILQ34_09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_09595 PF00672 HAMP domain ILQ34_09595 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_09600 PF07690 Major Facilitator Superfamily ILQ34_09605 PF00873 AcrB/AcrD/AcrF family ILQ34_09610 PF00873 AcrB/AcrD/AcrF family ILQ34_09615 PF13533 Biotin-lipoyl like ILQ34_09635 PF00092 von Willebrand factor type A domain ILQ34_09650 PF00012 Hsp70 protein ILQ34_09655 PF00730 HhH-GPD superfamily base excision DNA repair protein ILQ34_09655 PF06029 AlkA N-terminal domain ILQ34_09665 PF00485 Phosphoribulokinase / Uridine kinase family ILQ34_09670 PF00692 dUTPase ILQ34_09675 PF05170 AsmA family ILQ34_09690 PF00571 CBS domain ILQ34_09690 PF03471 Transporter associated domain ILQ34_09690 PF03741 Integral membrane protein TerC family ILQ34_09700 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ILQ34_09700 PF10531 SLBB domain ILQ34_09700 PF02563 Polysaccharide biosynthesis/export protein ILQ34_09705 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILQ34_09710 PF13614 AAA domain ILQ34_09710 PF02706 Chain length determinant protein ILQ34_09710 PF13807 G-rich domain on putative tyrosine kinase ILQ34_09715 PF00535 Glycosyl transferase family 2 ILQ34_09720 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_09725 PF13439 Glycosyltransferase Family 4 ILQ34_09725 PF00534 Glycosyl transferases group 1 ILQ34_09735 PF00535 Glycosyl transferase family 2 ILQ34_09740 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_09745 PF16363 GDP-mannose 4,6 dehydratase ILQ34_09750 PF01370 NAD dependent epimerase/dehydratase family ILQ34_09755 PF00293 NUDIX domain ILQ34_09760 PF13579 Glycosyl transferase 4-like domain ILQ34_09760 PF00534 Glycosyl transferases group 1 ILQ34_09765 PF01050 Mannose-6-phosphate isomerase ILQ34_09765 PF00483 Nucleotidyl transferase ILQ34_09770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ34_09770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ34_09770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ34_09770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ34_09775 PF02397 Bacterial sugar transferase ILQ34_09785 PF04230 Polysaccharide pyruvyl transferase ILQ34_09790 PF13439 Glycosyltransferase Family 4 ILQ34_09790 PF00534 Glycosyl transferases group 1 ILQ34_09800 PF01370 NAD dependent epimerase/dehydratase family ILQ34_09805 PF00483 Nucleotidyl transferase ILQ34_09810 PF00535 Glycosyl transferase family 2 ILQ34_09820 PF00535 Glycosyl transferase family 2 ILQ34_09830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILQ34_09840 PF16363 GDP-mannose 4,6 dehydratase ILQ34_09845 PF01370 NAD dependent epimerase/dehydratase family ILQ34_09850 PF00293 NUDIX domain ILQ34_09855 PF00483 Nucleotidyl transferase ILQ34_09855 PF01050 Mannose-6-phosphate isomerase ILQ34_09860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ34_09860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ34_09860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ34_09860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ34_09865 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_09865 PF14602 Hexapeptide repeat of succinyl-transferase ILQ34_09865 PF17836 PglD N-terminal domain ILQ34_09870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ34_09870 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ILQ34_09875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILQ34_09875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILQ34_09875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILQ34_09880 PF02706 Chain length determinant protein ILQ34_09885 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ILQ34_09885 PF01502 Phosphoribosyl-AMP cyclohydrolase ILQ34_09890 PF00977 Histidine biosynthesis protein ILQ34_09895 PF00977 Histidine biosynthesis protein ILQ34_09900 PF00117 Glutamine amidotransferase class-I ILQ34_09905 PF08645 Polynucleotide kinase 3 phosphatase ILQ34_09905 PF00475 Imidazoleglycerol-phosphate dehydratase ILQ34_09910 PF00155 Aminotransferase class I and II ILQ34_09915 PF00815 Histidinol dehydrogenase ILQ34_09920 PF01634 ATP phosphoribosyltransferase ILQ34_09920 PF08029 HisG, C-terminal domain ILQ34_09930 PF01370 NAD dependent epimerase/dehydratase family ILQ34_09935 PF03466 LysR substrate binding domain ILQ34_09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_09945 PF13520 Amino acid permease ILQ34_09950 PF04143 Sulphur transport ILQ34_09955 PF01206 Sulfurtransferase TusA ILQ34_09960 PF08411 Exonuclease C-terminal ILQ34_09960 PF00929 Exonuclease ILQ34_10050 PF10800 Protein of unknown function (DUF2528) ILQ34_10075 PF01381 Helix-turn-helix ILQ34_10075 PF00717 Peptidase S24-like ILQ34_10100 PF03796 DnaB-like helicase C terminal domain ILQ34_10100 PF00772 DnaB-like helicase N terminal domain ILQ34_10155 PF00149 Calcineurin-like phosphoesterase ILQ34_10180 PF00161 Ribosome inactivating protein ILQ34_10185 PF02258 Shiga-like toxin beta subunit ILQ34_10195 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_10210 PF04971 Bacteriophage P21 holin S ILQ34_10215 PF00959 Phage lysozyme ILQ34_10220 PF03245 Bacteriophage Rz lysis protein ILQ34_10235 PF13132 Domain of unknown function (DUF3950) ILQ34_10335 PF06316 Enterobacterial Ail/Lom protein ILQ34_10340 PF03335 Phage tail fibre repeat ILQ34_10340 PF07484 Phage Tail Collar Domain ILQ34_10340 PF08400 Prophage tail fibre N-terminal ILQ34_10350 PF12137 RNA polymerase recycling family C-terminal ILQ34_10350 PF00271 Helicase conserved C-terminal domain ILQ34_10350 PF18339 RapA N-terminal Tudor like domain 1 ILQ34_10350 PF18337 RapA N-terminal Tudor like domain ILQ34_10350 PF00176 SNF2 family N-terminal domain ILQ34_10360 PF00768 D-alanyl-D-alanine carboxypeptidase ILQ34_10360 PF07943 Penicillin-binding protein 5, C-terminal domain ILQ34_10365 PF06445 GyrI-like small molecule binding domain ILQ34_10370 PF04632 Fusaric acid resistance protein family ILQ34_10375 PF04363 Protein of unknown function (DUF496) ILQ34_10380 PF10662 Ethanolamine utilisation - propanediol utilisation ILQ34_10405 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ILQ34_10410 PF06174 Protein of unknown function (DUF987) ILQ34_10415 PF04002 RadC-like JAB domain ILQ34_10420 PF03230 Antirestriction protein ILQ34_10425 PF06067 Domain of unknown function (DUF932) ILQ34_10445 PF13990 YjcZ-like protein ILQ34_10460 PF07715 TonB-dependent Receptor Plug Domain ILQ34_10465 PF13007 Transposase C of IS166 homeodomain ILQ34_10465 PF13817 IS66 C-terminal element ILQ34_10465 PF03050 Transposase IS66 family ILQ34_10465 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_10470 PF05717 IS66 Orf2 like protein ILQ34_10480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ILQ34_10485 PF02654 Cobalamin-5-phosphate synthase ILQ34_10490 PF02277 Phosphoribosyltransferase ILQ34_10495 PF03734 L,D-transpeptidase catalytic domain ILQ34_10495 PF17969 L,D-transpeptidase C-terminal domain ILQ34_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_10505 PF03466 LysR substrate binding domain ILQ34_10510 PF03466 LysR substrate binding domain ILQ34_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_10520 PF01554 MatE ILQ34_10530 PF01709 Transcriptional regulator ILQ34_10535 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ILQ34_10535 PF01048 Phosphorylase superfamily ILQ34_10540 PF00083 Sugar (and other) transporter ILQ34_10540 PF07690 Major Facilitator Superfamily ILQ34_10570 PF06167 Glucose-regulated metallo-peptidase M90 ILQ34_10595 PF07358 Protein of unknown function (DUF1482) ILQ34_10600 PF05358 DicB protein ILQ34_10605 PF07151 Protein of unknown function (DUF1391) ILQ34_10635 PF07789 Protein of unknown function (DUF1627) ILQ34_10670 PF01848 Hok/gef family ILQ34_10680 PF06147 Protein of unknown function (DUF968) ILQ34_10685 PF05866 Endodeoxyribonuclease RusA ILQ34_10720 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_10730 PF04971 Bacteriophage P21 holin S ILQ34_10735 PF07041 Protein of unknown function (DUF1327) ILQ34_10740 PF00959 Phage lysozyme ILQ34_10755 PF06085 Lipoprotein Rz1 precursor ILQ34_10760 PF06069 PerC transcriptional activator ILQ34_10765 PF13132 Domain of unknown function (DUF3950) ILQ34_10770 PF07471 Phage DNA packaging protein Nu1 ILQ34_10775 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_10780 PF02831 gpW ILQ34_10790 PF01343 Peptidase family S49 ILQ34_10800 PF03864 Phage major capsid protein E ILQ34_10850 PF06316 Enterobacterial Ail/Lom protein ILQ34_10855 PF08400 Prophage tail fibre N-terminal ILQ34_10855 PF07484 Phage Tail Collar Domain ILQ34_10855 PF03335 Phage tail fibre repeat ILQ34_10865 PF04806 EspF protein repeat ILQ34_10875 PF01292 Prokaryotic cytochrome b561 ILQ34_10880 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ILQ34_10885 PF01794 Ferric reductase like transmembrane component ILQ34_10890 PF00174 Oxidoreductase molybdopterin binding domain ILQ34_10895 PF00576 HIUase/Transthyretin family ILQ34_10900 PF00072 Response regulator receiver domain ILQ34_10900 PF00486 Transcriptional regulatory protein, C terminal ILQ34_10905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_10905 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_10925 PF01966 HD domain ILQ34_10930 PF18284 DNA methylase N-terminal domain ILQ34_10930 PF00145 C-5 cytosine-specific DNA methylase ILQ34_10935 PF03852 DNA mismatch endonuclease Vsr ILQ34_10940 PF00892 EamA-like transporter family ILQ34_10945 PF05661 Protein of unknown function (DUF808) ILQ34_10950 PF09926 Uncharacterized small protein (DUF2158) ILQ34_10955 PF17151 Periplasmic sensor domain ILQ34_10955 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_10965 PF10733 Protein of unknown function (DUF2525) ILQ34_10970 PF10781 Dextransucrase DSRB ILQ34_10975 PF00196 Bacterial regulatory proteins, luxR family ILQ34_10980 PF01311 Bacterial export proteins, family 1 ILQ34_10985 PF01313 Bacterial export proteins, family 3 ILQ34_10990 PF00813 FliP family ILQ34_10995 PF04347 Flagellar biosynthesis protein, FliO ILQ34_11000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ILQ34_11000 PF16973 Flagellar motor switch protein FliN N-terminal ILQ34_11005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ILQ34_11005 PF02154 Flagellar motor switch protein FliM ILQ34_11010 PF03748 Flagellar basal body-associated protein FliL ILQ34_11015 PF02120 Flagellar hook-length control protein FliK ILQ34_11020 PF02050 Flagellar FliJ protein ILQ34_11025 PF18269 T3SS EscN ATPase C-terminal domain ILQ34_11025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ34_11030 PF02108 Flagellar assembly protein FliH ILQ34_11035 PF14841 FliG middle domain ILQ34_11035 PF14842 FliG N-terminal domain ILQ34_11035 PF01706 FliG C-terminal domain ILQ34_11040 PF01514 Secretory protein of YscJ/FliF family ILQ34_11040 PF08345 Flagellar M-ring protein C-terminal ILQ34_11045 PF02049 Flagellar hook-basal body complex protein FliE ILQ34_11050 PF17607 Family of unknown function (DUF5503) ILQ34_11055 PF00583 Acetyltransferase (GNAT) family ILQ34_11060 PF17607 Family of unknown function (DUF5503) ILQ34_11065 PF00583 Acetyltransferase (GNAT) family ILQ34_11070 PF02586 SOS response associated peptidase (SRAP) ILQ34_11075 PF01206 Sulfurtransferase TusA ILQ34_11080 PF04143 Sulphur transport ILQ34_11085 PF13987 YedD-like protein ILQ34_11090 PF02806 Alpha amylase, C-terminal all-beta domain ILQ34_11090 PF00128 Alpha amylase, catalytic domain ILQ34_11095 PF05400 Flagellar protein FliT ILQ34_11100 PF02561 Flagellar protein FliS ILQ34_11105 PF07195 Flagellar hook-associated protein 2 C-terminus ILQ34_11105 PF02465 Flagellar hook-associated protein 2 N-terminus ILQ34_11110 PF00700 Bacterial flagellin C-terminal helical region ILQ34_11110 PF00669 Bacterial flagellin N-terminal helical region ILQ34_11110 PF12445 Flagellin protein ILQ34_11115 PF04545 Sigma-70, region 4 ILQ34_11115 PF04539 Sigma-70 region 3 ILQ34_11115 PF04542 Sigma-70 region 2 ILQ34_11120 PF02899 Phage integrase, N-terminal SAM-like domain ILQ34_11125 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_11130 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_11135 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_11140 PF00005 ABC transporter ILQ34_11145 PF00196 Bacterial regulatory proteins, luxR family ILQ34_11145 PF03472 Autoinducer binding domain ILQ34_11150 PF10769 Protein of unknown function (DUF2594) ILQ34_11160 PF00072 Response regulator receiver domain ILQ34_11160 PF00196 Bacterial regulatory proteins, luxR family ILQ34_11165 PF01541 GIY-YIG catalytic domain ILQ34_11165 PF02151 UvrB/uvrC motif ILQ34_11165 PF08459 UvrC Helix-hairpin-helix N-terminal ILQ34_11170 PF01066 CDP-alcohol phosphatidyltransferase ILQ34_11200 PF00665 Integrase core domain ILQ34_11200 PF13936 Helix-turn-helix domain ILQ34_11210 PF17482 Phage tail sheath C-terminal domain ILQ34_11210 PF04984 Phage tail sheath protein subtilisin-like domain ILQ34_11245 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_11255 PF10784 Plasmid stability protein ILQ34_11260 PF06406 StbA protein ILQ34_11265 PF05840 Bacteriophage replication gene A protein (GPA) ILQ34_11345 PF00589 Phage integrase family ILQ34_11345 PF02899 Phage integrase, N-terminal SAM-like domain ILQ34_11350 PF02810 SEC-C motif ILQ34_11350 PF03695 Uncharacterised protein family (UPF0149) ILQ34_11355 PF03222 Tryptophan/tyrosine permease family ILQ34_11360 PF10678 Protein of unknown function (DUF2492) ILQ34_11365 PF00210 Ferritin-like domain ILQ34_11370 PF13992 YecR-like lipoprotein ILQ34_11380 PF10964 Protein of unknown function (DUF2766) ILQ34_11385 PF00210 Ferritin-like domain ILQ34_11390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ34_11395 PF00005 ABC transporter ILQ34_11400 PF02653 Branched-chain amino acid transport system / permease component ILQ34_11405 PF02358 Trehalose-phosphatase ILQ34_11410 PF00982 Glycosyltransferase family 20 ILQ34_11415 PF00582 Universal stress protein family ILQ34_11420 PF05247 Flagellar transcriptional activator (FlhD) ILQ34_11425 PF05280 Flagellar transcriptional activator (FlhC) ILQ34_11430 PF01618 MotA/TolQ/ExbB proton channel family ILQ34_11435 PF00691 OmpA family ILQ34_11435 PF13677 Membrane MotB of proton-channel complex MotA/MotB ILQ34_11440 PF01584 CheW-like domain ILQ34_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_11440 PF02895 Signal transducing histidine kinase, homodimeric domain ILQ34_11440 PF01627 Hpt domain ILQ34_11440 PF09078 CheY binding ILQ34_11445 PF01584 CheW-like domain ILQ34_11450 PF02203 Tar ligand binding domain homologue ILQ34_11450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ34_11450 PF00672 HAMP domain ILQ34_11455 PF02203 Tar ligand binding domain homologue ILQ34_11455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ34_11455 PF00672 HAMP domain ILQ34_11460 PF03705 CheR methyltransferase, all-alpha domain ILQ34_11460 PF01739 CheR methyltransferase, SAM binding domain ILQ34_11465 PF00072 Response regulator receiver domain ILQ34_11465 PF01339 CheB methylesterase ILQ34_11470 PF00072 Response regulator receiver domain ILQ34_11475 PF04344 Chemotaxis phosphatase, CheZ ILQ34_11480 PF01312 FlhB HrpN YscU SpaS Family ILQ34_11485 PF00771 FHIPEP family ILQ34_11490 PF06366 Flagellar protein FlhE ILQ34_11495 PF07007 Lysozyme inhibitor LprI ILQ34_11500 PF03485 Arginyl tRNA synthetase N terminal domain ILQ34_11500 PF05746 DALR anticodon binding domain ILQ34_11500 PF00750 tRNA synthetases class I (R) ILQ34_11505 PF06185 YecM protein ILQ34_11510 PF03932 CutC family ILQ34_11515 PF03264 NapC/NirT cytochrome c family, N-terminal region ILQ34_11520 PF00384 Molybdopterin oxidoreductase ILQ34_11520 PF01568 Molydopterin dinucleotide binding domain ILQ34_11520 PF18364 Molybdopterin oxidoreductase N-terminal domain ILQ34_11525 PF08003 Protein of unknown function (DUF1698) ILQ34_11530 PF13649 Methyltransferase domain ILQ34_11535 PF01124 MAPEG family ILQ34_11540 PF01904 Protein of unknown function DUF72 ILQ34_11545 PF12167 Arm DNA-binding domain ILQ34_11545 PF00589 Phage integrase family ILQ34_11590 PF00717 Peptidase S24-like ILQ34_11590 PF01726 LexA DNA binding domain ILQ34_11620 PF01695 IstB-like ATP binding protein ILQ34_11625 PF03796 DnaB-like helicase C terminal domain ILQ34_11625 PF00772 DnaB-like helicase N terminal domain ILQ34_11635 PF06147 Protein of unknown function (DUF968) ILQ34_11640 PF06530 Phage antitermination protein Q ILQ34_11650 PF01555 DNA methylase ILQ34_11655 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_11670 PF04971 Bacteriophage P21 holin S ILQ34_11675 PF00959 Phage lysozyme ILQ34_11710 PF00574 Clp protease ILQ34_11780 PF06316 Enterobacterial Ail/Lom protein ILQ34_11785 PF08400 Prophage tail fibre N-terminal ILQ34_11785 PF07484 Phage Tail Collar Domain ILQ34_11785 PF03335 Phage tail fibre repeat ILQ34_11805 PF06183 DinI-like family ILQ34_11810 PF00857 Isochorismatase family ILQ34_11815 PF01336 OB-fold nucleic acid binding domain ILQ34_11815 PF00152 tRNA synthetases class II (D, K and N) ILQ34_11815 PF02938 GAD domain ILQ34_11820 PF00293 NUDIX domain ILQ34_11825 PF01709 Transcriptional regulator ILQ34_11830 PF02075 Crossover junction endodeoxyribonuclease RuvC ILQ34_11835 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ILQ34_11845 PF07499 RuvA, C-terminal domain ILQ34_11845 PF01330 RuvA N terminal domain ILQ34_11850 PF17864 RuvB AAA lid domain ILQ34_11850 PF05496 Holliday junction DNA helicase RuvB P-loop domain ILQ34_11850 PF05491 RuvB C-terminal winged helix domain ILQ34_11855 PF00950 ABC 3 transport family ILQ34_11860 PF00005 ABC transporter ILQ34_11865 PF01297 Zinc-uptake complex component A periplasmic ILQ34_11870 PF08525 Opacity-associated protein A N-terminal motif ILQ34_11870 PF01476 LysM domain ILQ34_11870 PF01551 Peptidase family M23 ILQ34_11875 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ34_11880 PF00224 Pyruvate kinase, barrel domain ILQ34_11880 PF02887 Pyruvate kinase, alpha/beta domain ILQ34_11885 PF01418 Helix-turn-helix domain, rpiR family ILQ34_11885 PF01380 SIS domain ILQ34_11890 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ILQ34_11890 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ILQ34_11895 PF00920 Dehydratase family ILQ34_11900 PF01081 KDPG and KHG aldolase ILQ34_11905 PF02222 ATP-grasp domain ILQ34_11910 PF07130 YebG protein ILQ34_11915 PF13995 YebF-like protein ILQ34_11920 PF04391 Protein of unknown function (DUF533) ILQ34_11925 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ILQ34_11925 PF00326 Prolyl oligopeptidase family ILQ34_11930 PF00929 Exonuclease ILQ34_11935 PF00795 Carbon-nitrogen hydrolase ILQ34_11940 PF06440 DNA polymerase III, theta subunit ILQ34_11945 PF04234 CopC domain ILQ34_11950 PF05425 Copper resistance protein D ILQ34_11955 PF10709 Protein of unknown function (DUF2511) ILQ34_11960 PF00149 Calcineurin-like phosphoesterase ILQ34_11965 PF07358 Protein of unknown function (DUF1482) ILQ34_11970 PF07351 Protein of unknown function (DUF1480) ILQ34_11975 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ILQ34_11975 PF01189 16S rRNA methyltransferase RsmB/F ILQ34_11975 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF ILQ34_11980 PF02470 MlaD protein ILQ34_11985 PF04403 Paraquat-inducible protein A ILQ34_11990 PF13185 GAF domain ILQ34_11995 PF04352 ProQ/FINO family ILQ34_11995 PF17516 ProQ C-terminal domain ILQ34_12000 PF00595 PDZ domain ILQ34_12000 PF03572 Peptidase family S41 ILQ34_12000 PF11818 C-terminal domain of tail specific protease (DUF3340) ILQ34_12000 PF17804 Tail specific protease N-terminal domain ILQ34_12005 PF01435 Peptidase family M48 ILQ34_12010 PF07690 Major Facilitator Superfamily ILQ34_12015 PF01614 Bacterial transcriptional regulator ILQ34_12015 PF09339 IclR helix-turn-helix domain ILQ34_12020 PF13996 YobH-like protein ILQ34_12025 PF13998 MgrB protein ILQ34_12030 PF13974 YebO-like protein ILQ34_12035 PF10736 Protein of unknown function (DUF2627) ILQ34_12040 PF00313 'Cold-shock' DNA-binding domain ILQ34_12045 PF13847 Methyltransferase domain ILQ34_12050 PF02659 Putative manganese efflux pump ILQ34_12055 PF06173 Protein of unknown function (DUF986) ILQ34_12060 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ34_12065 PF03609 PTS system sorbose-specific iic component ILQ34_12070 PF03610 PTS system fructose IIA component ILQ34_12070 PF03830 PTS system sorbose subfamily IIB component ILQ34_12075 PF03471 Transporter associated domain ILQ34_12075 PF03741 Integral membrane protein TerC family ILQ34_12080 PF00563 EAL domain ILQ34_12080 PF12792 CSS motif domain associated with EAL ILQ34_12085 PF03315 Serine dehydratase beta chain ILQ34_12085 PF03313 Serine dehydratase alpha chain ILQ34_12090 PF00293 NUDIX domain ILQ34_12095 PF04715 Anthranilate synthase component I, N terminal region ILQ34_12095 PF00425 chorismate binding enzyme ILQ34_12100 PF03701 Uncharacterised protein family (UPF0181) ILQ34_12105 PF08986 Domain of unknown function (DUF1889) ILQ34_12110 PF01042 Endoribonuclease L-PSP ILQ34_12115 PF04851 Type III restriction enzyme, res subunit ILQ34_12115 PF13307 Helicase C-terminal domain ILQ34_12120 PF00814 Glycoprotease family ILQ34_12125 PF03843 Outer membrane lipoprotein Slp family ILQ34_12130 PF13193 AMP-binding enzyme C-terminal domain ILQ34_12130 PF00501 AMP-binding enzyme ILQ34_12135 PF00570 HRDC domain ILQ34_12135 PF01612 3'-5' exonuclease ILQ34_12140 PF00970 Oxidoreductase FAD-binding domain ILQ34_12140 PF00175 Oxidoreductase NAD-binding domain ILQ34_12140 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ34_12145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ILQ34_12145 PF00355 Rieske [2Fe-2S] domain ILQ34_12150 PF02028 BCCT, betaine/carnitine/choline family transporter ILQ34_12155 PF00180 Isocitrate/isopropylmalate dehydrogenase ILQ34_12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_12160 PF03466 LysR substrate binding domain ILQ34_12165 PF01810 LysE type translocator ILQ34_12170 PF09313 Domain of unknown function (DUF1971) ILQ34_12175 PF08956 Domain of unknown function (DUF1869) ILQ34_12180 PF04226 Transglycosylase associated protein ILQ34_12200 PF03891 Domain of unknown function (DUF333) ILQ34_12205 PF04343 Protein of unknown function, DUF488 ILQ34_12210 PF07690 Major Facilitator Superfamily ILQ34_12215 PF12833 Helix-turn-helix domain ILQ34_12215 PF02311 AraC-like ligand binding domain ILQ34_12220 PF04284 Protein of unknown function (DUF441) ILQ34_12230 PF04073 Aminoacyl-tRNA editing domain ILQ34_12235 PF17155 Gammaproteobacterial periplasmic sensor domain ILQ34_12235 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_12240 PF17158 Membrane-associated sensor, integral membrane domain ILQ34_12240 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_12245 PF04285 Protein of unknown function (DUF444) ILQ34_12250 PF08298 PrkA AAA domain ILQ34_12250 PF06798 PrkA serine protein kinase C-terminal domain ILQ34_12255 PF06629 MltA-interacting protein MipA ILQ34_12260 PF00248 Aldo/keto reductase family ILQ34_12265 PF01263 Aldose 1-epimerase ILQ34_12270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILQ34_12270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILQ34_12275 PF01641 SelR domain ILQ34_12280 PF07023 Protein of unknown function (DUF1315) ILQ34_12285 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_12285 PF00107 Zinc-binding dehydrogenase ILQ34_12290 PF00083 Sugar (and other) transporter ILQ34_12295 PF00107 Zinc-binding dehydrogenase ILQ34_12295 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_12300 PF01116 Fructose-bisphosphate aldolase class-II ILQ34_12305 PF00294 pfkB family carbohydrate kinase ILQ34_12310 PF00248 Aldo/keto reductase family ILQ34_12315 PF08220 DeoR-like helix-turn-helix domain ILQ34_12315 PF00455 DeoR C terminal sensor domain ILQ34_12330 PF00857 Isochorismatase family ILQ34_12335 PF00710 Asparaginase, N-terminal ILQ34_12335 PF17763 Glutaminase/Asparaginase C-terminal domain ILQ34_12345 PF01343 Peptidase family S49 ILQ34_12350 PF00881 Nitroreductase family ILQ34_12355 PF00586 AIR synthase related protein, N-terminal domain ILQ34_12355 PF02769 AIR synthase related protein, C-terminal domain ILQ34_12360 PF01751 Toprim domain ILQ34_12360 PF01131 DNA topoisomerase ILQ34_12365 PF06889 Protein of unknown function (DUF1266) ILQ34_12370 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ILQ34_12370 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ILQ34_12375 PF07383 Protein of unknown function (DUF1496) ILQ34_12380 PF00293 NUDIX domain ILQ34_12385 PF01066 CDP-alcohol phosphatidyltransferase ILQ34_12390 PF00581 Rhodanese-like domain ILQ34_12395 PF00005 ABC transporter ILQ34_12400 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_12405 PF13416 Bacterial extracellular solute-binding protein ILQ34_12410 PF02627 Carboxymuconolactone decarboxylase family ILQ34_12415 PF09335 SNARE associated Golgi protein ILQ34_12425 PF09335 SNARE associated Golgi protein ILQ34_12430 PF03372 Endonuclease/Exonuclease/phosphatase family ILQ34_12435 PF00202 Aminotransferase class-III ILQ34_12440 PF04958 Arginine N-succinyltransferase beta subunit ILQ34_12445 PF00171 Aldehyde dehydrogenase family ILQ34_12450 PF04996 Succinylarginine dihydrolase ILQ34_12455 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ILQ34_12460 PF07813 LTXXQ motif family protein ILQ34_12465 PF05962 HutD ILQ34_12475 PF02540 NAD synthase ILQ34_12480 PF04355 SmpA / OmlA family ILQ34_12485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_12490 PF02378 Phosphotransferase system, EIIC ILQ34_12495 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ILQ34_12500 PF07883 Cupin domain ILQ34_12500 PF12833 Helix-turn-helix domain ILQ34_12505 PF11975 Family 4 glycosyl hydrolase C-terminal domain ILQ34_12505 PF02056 Family 4 glycosyl hydrolase ILQ34_12510 PF04794 YdjC-like protein ILQ34_12515 PF18011 C-terminal domain found in long catalases ILQ34_12515 PF06628 Catalase-related immune-responsive ILQ34_12515 PF00199 Catalase ILQ34_12520 PF10729 Cell division activator CedA ILQ34_12530 PF00375 Sodium:dicarboxylate symporter family ILQ34_12535 PF04307 LexA-binding, inner membrane-associated putative hydrolase ILQ34_12540 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_12545 PF14002 YniB-like protein ILQ34_12550 PF03881 Fructosamine kinase ILQ34_12555 PF11080 Endoribonuclease GhoS ILQ34_12560 PF00294 pfkB family carbohydrate kinase ILQ34_12565 PF04338 Protein of unknown function, DUF481 ILQ34_12580 PF02824 TGS domain ILQ34_12580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILQ34_12580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ILQ34_12580 PF03129 Anticodon binding domain ILQ34_12585 PF05198 Translation initiation factor IF-3, N-terminal domain ILQ34_12585 PF00707 Translation initiation factor IF-3, C-terminal domain ILQ34_12590 PF01632 Ribosomal protein L35 ILQ34_12595 PF00453 Ribosomal protein L20 ILQ34_12605 PF01409 tRNA synthetases class II core domain (F) ILQ34_12605 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ILQ34_12610 PF03483 B3/4 domain ILQ34_12610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ILQ34_12610 PF03484 tRNA synthetase B5 domain ILQ34_12610 PF01588 Putative tRNA binding domain ILQ34_12610 PF03147 Ferredoxin-fold anticodon binding domain ILQ34_12615 PF00216 Bacterial DNA-binding protein ILQ34_12620 PF01032 FecCD transport family ILQ34_12625 PF00255 Glutathione peroxidase ILQ34_12630 PF00005 ABC transporter ILQ34_12635 PF00877 NlpC/P60 family ILQ34_12640 PF00563 EAL domain ILQ34_12645 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ILQ34_12650 PF10636 Hemin uptake protein hemP ILQ34_12655 PF00793 DAHP synthetase I family ILQ34_12660 PF03618 Kinase/pyrophosphorylase ILQ34_12665 PF00391 PEP-utilising enzyme, mobile domain ILQ34_12665 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ34_12665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ILQ34_12670 PF13193 AMP-binding enzyme C-terminal domain ILQ34_12670 PF00501 AMP-binding enzyme ILQ34_12680 PF01494 FAD binding domain ILQ34_12685 PF01012 Electron transfer flavoprotein domain ILQ34_12685 PF00766 Electron transfer flavoprotein FAD-binding domain ILQ34_12690 PF01012 Electron transfer flavoprotein domain ILQ34_12695 PF12833 Helix-turn-helix domain ILQ34_12695 PF02311 AraC-like ligand binding domain ILQ34_12700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILQ34_12700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ34_12700 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ34_12705 PF01144 Coenzyme A transferase ILQ34_12710 PF01487 Type I 3-dehydroquinase ILQ34_12715 PF08501 Shikimate dehydrogenase substrate binding domain ILQ34_12715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ILQ34_12720 PF07690 Major Facilitator Superfamily ILQ34_12725 PF07690 Major Facilitator Superfamily ILQ34_12730 PF08965 Domain of unknown function (DUF1870) ILQ34_12740 PF01594 AI-2E family transporter ILQ34_12745 PF01565 FAD binding domain ILQ34_12745 PF02913 FAD linked oxidases, C-terminal domain ILQ34_12745 PF13183 4Fe-4S dicluster domain ILQ34_12750 PF03061 Thioesterase superfamily ILQ34_12755 PF15930 Domain of unknown function ILQ34_12760 PF01521 Iron-sulphur cluster biosynthesis ILQ34_12765 PF01458 Uncharacterized protein family (UPF0051) ILQ34_12770 PF00005 ABC transporter ILQ34_12775 PF01458 Uncharacterized protein family (UPF0051) ILQ34_12780 PF00266 Aminotransferase class-V ILQ34_12785 PF02657 Fe-S metabolism associated domain ILQ34_12790 PF03734 L,D-transpeptidase catalytic domain ILQ34_12790 PF01476 LysM domain ILQ34_12790 PF17969 L,D-transpeptidase C-terminal domain ILQ34_12795 PF04728 Lipoprotein leucine-zipper ILQ34_12800 PF00224 Pyruvate kinase, barrel domain ILQ34_12800 PF02887 Pyruvate kinase, alpha/beta domain ILQ34_12805 PF10965 Protein of unknown function (DUF2767) ILQ34_12810 PF13247 4Fe-4S dicluster domain ILQ34_12810 PF12800 4Fe-4S binding domain ILQ34_12815 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain ILQ34_12815 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 ILQ34_12825 PF13247 4Fe-4S dicluster domain ILQ34_12830 PF01292 Prokaryotic cytochrome b561 ILQ34_12840 PF13454 FAD-NAD(P)-binding ILQ34_12845 PF08803 Putative mono-oxygenase ydhR ILQ34_12860 PF16168 Adhesin of bacterial autotransporter system, probable stalk ILQ34_12860 PF03212 Pertactin ILQ34_12865 PF01554 MatE ILQ34_12870 PF00677 Lumazine binding domain ILQ34_12880 PF07690 Major Facilitator Superfamily ILQ34_12885 PF03466 LysR substrate binding domain ILQ34_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_12890 PF00356 Bacterial regulatory proteins, lacI family ILQ34_12900 PF07690 Major Facilitator Superfamily ILQ34_12905 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ILQ34_12905 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ILQ34_12910 PF00877 NlpC/P60 family ILQ34_12915 PF00462 Glutaredoxin ILQ34_12920 PF00270 DEAD/DEAH box helicase ILQ34_12920 PF00271 Helicase conserved C-terminal domain ILQ34_12920 PF08494 DEAD/H associated ILQ34_12925 PF00929 Exonuclease ILQ34_12930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILQ34_12935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILQ34_12940 PF00440 Bacterial regulatory proteins, tetR family ILQ34_12940 PF16925 Tetracyclin repressor-like, C-terminal domain ILQ34_12945 PF06945 Protein of unknown function (DUF1289) ILQ34_12955 PF00080 Copper/zinc superoxide dismutase (SODC) ILQ34_12960 PF04632 Fusaric acid resistance protein family ILQ34_12965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_12965 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_12970 PF07869 Protein of unknown function (DUF1656) ILQ34_12975 PF01047 MarR family ILQ34_12980 PF05433 Glycine zipper 2TM domain ILQ34_12985 PF03702 Anhydro-N-acetylmuramic acid kinase ILQ34_12990 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ILQ34_12995 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ILQ34_12995 PF01243 Pyridoxamine 5'-phosphate oxidase ILQ34_13000 PF00579 tRNA synthetases class I (W and Y) ILQ34_13000 PF01479 S4 domain ILQ34_13005 PF08543 Phosphomethylpyrimidine kinase ILQ34_13010 PF02798 Glutathione S-transferase, N-terminal domain ILQ34_13010 PF00043 Glutathione S-transferase, C-terminal domain ILQ34_13015 PF00854 POT family ILQ34_13020 PF00730 HhH-GPD superfamily base excision DNA repair protein ILQ34_13020 PF10576 Iron-sulfur binding domain of endonuclease III ILQ34_13020 PF00633 Helix-hairpin-helix motif ILQ34_13025 PF02508 Rnf-Nqr subunit, membrane protein ILQ34_13030 PF04205 FMN-binding domain ILQ34_13035 PF03116 NQR2, RnfD, RnfE family ILQ34_13040 PF10531 SLBB domain ILQ34_13040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ILQ34_13040 PF13375 RnfC Barrel sandwich hybrid domain ILQ34_13040 PF12838 4Fe-4S dicluster domain ILQ34_13045 PF04060 Putative Fe-S cluster ILQ34_13050 PF02508 Rnf-Nqr subunit, membrane protein ILQ34_13055 PF10754 Protein of unknown function (DUF2569) ILQ34_13060 PF05321 Haemolysin expression modulating protein ILQ34_13070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ34_13070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ILQ34_13075 PF00962 Adenosine/AMP deaminase ILQ34_13080 PF00155 Aminotransferase class I and II ILQ34_13085 PF02378 Phosphotransferase system, EIIC ILQ34_13085 PF00367 phosphotransferase system, EIIB ILQ34_13090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ34_13090 PF00356 Bacterial regulatory proteins, lacI family ILQ34_13100 PF00440 Bacterial regulatory proteins, tetR family ILQ34_13120 PF06097 Bacterial protein of unknown function (DUF945) ILQ34_13125 PF01238 Phosphomannose isomerase type I ILQ34_13130 PF05681 Fumarate hydratase (Fumerase) ILQ34_13130 PF05683 Fumarase C-terminus ILQ34_13135 PF00206 Lyase ILQ34_13135 PF10415 Fumarase C C-terminus ILQ34_13140 PF05472 DNA replication terminus site-binding protein (Ter protein) ILQ34_13145 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_13145 PF00672 HAMP domain ILQ34_13150 PF00486 Transcriptional regulatory protein, C terminal ILQ34_13150 PF00072 Response regulator receiver domain ILQ34_13155 PF06942 GlpM protein ILQ34_13165 PF13520 Amino acid permease ILQ34_13170 PF07338 Protein of unknown function (DUF1471) ILQ34_13175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ILQ34_13175 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ILQ34_13175 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ILQ34_13180 PF02233 NAD(P) transhydrogenase beta subunit ILQ34_13185 PF01594 AI-2E family transporter ILQ34_13190 PF00893 Small Multidrug Resistance protein ILQ34_13195 PF00893 Small Multidrug Resistance protein ILQ34_13200 PF00089 Trypsin ILQ34_13215 PF07690 Major Facilitator Superfamily ILQ34_13220 PF03466 LysR substrate binding domain ILQ34_13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_13225 PF00480 ROK family ILQ34_13235 PF00654 Voltage gated chloride channel ILQ34_13240 PF02613 Nitrate reductase delta subunit ILQ34_13245 PF04976 DMSO reductase anchor subunit (DmsC) ILQ34_13250 PF12800 4Fe-4S binding domain ILQ34_13250 PF13247 4Fe-4S dicluster domain ILQ34_13255 PF00384 Molybdopterin oxidoreductase ILQ34_13255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ34_13255 PF01568 Molydopterin dinucleotide binding domain ILQ34_13260 PF01568 Molydopterin dinucleotide binding domain ILQ34_13260 PF00384 Molybdopterin oxidoreductase ILQ34_13260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ34_13265 PF06649 Protein of unknown function (DUF1161) ILQ34_13270 PF06788 Uncharacterised protein family (UPF0257) ILQ34_13275 PF13302 Acetyltransferase (GNAT) domain ILQ34_13280 PF06932 Protein of unknown function (DUF1283) ILQ34_13285 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ILQ34_13305 PF07358 Protein of unknown function (DUF1482) ILQ34_13310 PF05358 DicB protein ILQ34_13335 PF01381 Helix-turn-helix ILQ34_13360 PF07789 Protein of unknown function (DUF1627) ILQ34_13375 PF01848 Hok/gef family ILQ34_13390 PF06147 Protein of unknown function (DUF968) ILQ34_13395 PF05866 Endodeoxyribonuclease RusA ILQ34_13410 PF01555 DNA methylase ILQ34_13425 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_13430 PF04971 Bacteriophage P21 holin S ILQ34_13435 PF07041 Protein of unknown function (DUF1327) ILQ34_13440 PF00959 Phage lysozyme ILQ34_13470 PF13132 Domain of unknown function (DUF3950) ILQ34_13575 PF06316 Enterobacterial Ail/Lom protein ILQ34_13580 PF03335 Phage tail fibre repeat ILQ34_13580 PF08400 Prophage tail fibre N-terminal ILQ34_13580 PF07484 Phage Tail Collar Domain ILQ34_13615 PF16809 NleF caspase inhibitor ILQ34_13625 PF03050 Transposase IS66 family ILQ34_13625 PF13007 Transposase C of IS166 homeodomain ILQ34_13625 PF13817 IS66 C-terminal element ILQ34_13625 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_13630 PF05717 IS66 Orf2 like protein ILQ34_13680 PF05974 Domain of unknown function (DUF892) ILQ34_13685 PF05974 Domain of unknown function (DUF892) ILQ34_13690 PF10685 Stress-induced bacterial acidophilic repeat motif ILQ34_13695 PF00290 Tryptophan synthase alpha chain ILQ34_13700 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_13705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ILQ34_13705 PF00218 Indole-3-glycerol phosphate synthase ILQ34_13710 PF02885 Glycosyl transferase family, helical bundle domain ILQ34_13710 PF00591 Glycosyl transferase family, a/b domain ILQ34_13710 PF00117 Glutamine amidotransferase class-I ILQ34_13715 PF04715 Anthranilate synthase component I, N terminal region ILQ34_13715 PF00425 chorismate binding enzyme ILQ34_13720 PF08255 Trp-operon Leader Peptide ILQ34_13725 PF02811 PHP domain ILQ34_13730 PF01300 Telomere recombination ILQ34_13735 PF09972 Predicted membrane protein (DUF2207) ILQ34_13740 PF01479 S4 domain ILQ34_13740 PF00849 RNA pseudouridylate synthase ILQ34_13745 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ILQ34_13745 PF12557 Cob(I)alamin adenosyltransferase N terminal ILQ34_13750 PF00106 short chain dehydrogenase ILQ34_13755 PF01343 Peptidase family S49 ILQ34_13755 PF08496 Peptidase family S49 N-terminal ILQ34_13760 PF10692 Protein of unknown function (DUF2498) ILQ34_13765 PF01396 Topoisomerase DNA binding C4 zinc finger ILQ34_13765 PF08272 Topoisomerase I zinc-ribbon-like ILQ34_13765 PF01131 DNA topoisomerase ILQ34_13765 PF01751 Toprim domain ILQ34_13770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_13770 PF03466 LysR substrate binding domain ILQ34_13790 PF00330 Aconitase family (aconitate hydratase) ILQ34_13790 PF00694 Aconitase C-terminal domain ILQ34_13795 PF00925 GTP cyclohydrolase II ILQ34_13800 PF01569 PAP2 superfamily ILQ34_13805 PF06305 Lipopolysaccharide assembly protein A domain ILQ34_13810 PF18073 Rubredoxin metal binding domain ILQ34_13815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ILQ34_13820 PF01253 Translation initiation factor SUI1 ILQ34_13825 PF05433 Glycine zipper 2TM domain ILQ34_13830 PF08220 DeoR-like helix-turn-helix domain ILQ34_13830 PF00455 DeoR C terminal sensor domain ILQ34_13840 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_13840 PF00563 EAL domain ILQ34_13840 PF13426 PAS domain ILQ34_13845 PF00773 RNB domain ILQ34_13845 PF17876 Cold shock domain ILQ34_13845 PF08206 Ribonuclease B OB domain ILQ34_13845 PF00575 S1 RNA binding domain ILQ34_13860 PF00440 Bacterial regulatory proteins, tetR family ILQ34_13860 PF16295 Tetracyclin repressor-like, C-terminal domain ILQ34_13865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_13865 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_13875 PF02321 Outer membrane efflux protein ILQ34_13880 PF07690 Major Facilitator Superfamily ILQ34_13885 PF00005 ABC transporter ILQ34_13890 PF00005 ABC transporter ILQ34_13890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_13895 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_13895 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ34_13900 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_13905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_13910 PF10820 Protein of unknown function (DUF2543) ILQ34_13915 PF00324 Amino acid permease ILQ34_13925 PF00120 Glutamine synthetase, catalytic domain ILQ34_13935 PF07883 Cupin domain ILQ34_13935 PF01381 Helix-turn-helix ILQ34_13940 PF00171 Aldehyde dehydrogenase family ILQ34_13945 PF01266 FAD dependent oxidoreductase ILQ34_13950 PF00202 Aminotransferase class-III ILQ34_13955 PF02954 Bacterial regulatory protein, Fis family ILQ34_13955 PF00158 Sigma-54 interaction domain ILQ34_13960 PF04012 PspA/IM30 family ILQ34_13965 PF06667 Phage shock protein B ILQ34_13970 PF04024 PspC domain ILQ34_13975 PF09584 Phage shock protein PspD (Phageshock_PspD) ILQ34_13980 PF00581 Rhodanese-like domain ILQ34_13995 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_14000 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_14005 PF00107 Zinc-binding dehydrogenase ILQ34_14010 PF01261 Xylose isomerase-like TIM barrel ILQ34_14015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ILQ34_14015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ34_14020 PF03632 Glycosyl hydrolase family 65 central catalytic domain ILQ34_14020 PF03636 Glycosyl hydrolase family 65, N-terminal domain ILQ34_14020 PF03633 Glycosyl hydrolase family 65, C-terminal domain ILQ34_14025 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_14030 PF03459 TOBE domain ILQ34_14030 PF17912 MalK OB fold domain ILQ34_14030 PF00005 ABC transporter ILQ34_14035 PF09381 Outer membrane protein G (OmpG) ILQ34_14040 PF00356 Bacterial regulatory proteins, lacI family ILQ34_14040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ34_14045 PF04317 YcjX-like family, DUF463 ILQ34_14050 PF05128 Domain of unknown function (DUF697) ILQ34_14055 PF00158 Sigma-54 interaction domain ILQ34_14055 PF13188 PAS domain ILQ34_14055 PF18024 Helix-turn-helix domain ILQ34_14060 PF08534 Redoxin ILQ34_14065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ILQ34_14065 PF13378 Enolase C-terminal domain-like ILQ34_14070 PF00246 Zinc carboxypeptidase ILQ34_14085 PF12146 Serine aminopeptidase, S33 ILQ34_14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_14090 PF03466 LysR substrate binding domain ILQ34_14095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_14100 PF00924 Mechanosensitive ion channel ILQ34_14105 PF10749 Protein of unknown function (DUF2534) ILQ34_14110 PF00582 Universal stress protein family ILQ34_14115 PF00325 Bacterial regulatory proteins, crp family ILQ34_14115 PF00027 Cyclic nucleotide-binding domain ILQ34_14120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ILQ34_14120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILQ34_14130 PF01546 Peptidase family M20/M25/M40 ILQ34_14135 PF07687 Peptidase dimerisation domain ILQ34_14135 PF01546 Peptidase family M20/M25/M40 ILQ34_14140 PF03466 LysR substrate binding domain ILQ34_14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_14145 PF01713 Smr domain ILQ34_14150 PF08448 PAS fold ILQ34_14150 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_14155 PF01544 CorA-like Mg2+ transporter protein ILQ34_14165 PF00270 DEAD/DEAH box helicase ILQ34_14165 PF03880 DbpA RNA binding domain ILQ34_14165 PF00271 Helicase conserved C-terminal domain ILQ34_14170 PF01171 PP-loop family ILQ34_14175 PF00582 Universal stress protein family ILQ34_14185 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ILQ34_14185 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ILQ34_14185 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ILQ34_14185 PF10371 Domain of unknown function ILQ34_14185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_14190 PF03891 Domain of unknown function (DUF333) ILQ34_14195 PF03724 META domain ILQ34_14200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ILQ34_14200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ34_14205 PF11739 Dicarboxylate transport ILQ34_14210 PF13617 YnbE-like lipoprotein ILQ34_14215 PF07027 Protein of unknown function (DUF1318) ILQ34_14230 PF00248 Aldo/keto reductase family ILQ34_14235 PF10971 Protein of unknown function (DUF2773) ILQ34_14240 PF01066 CDP-alcohol phosphatidyltransferase ILQ34_14250 PF12147 Putative methyltransferase ILQ34_14250 PF12146 Serine aminopeptidase, S33 ILQ34_14255 PF00782 Dual specificity phosphatase, catalytic domain ILQ34_14260 PF02525 Flavodoxin-like fold ILQ34_14265 PF04408 Helicase associated domain (HA2) ILQ34_14265 PF00271 Helicase conserved C-terminal domain ILQ34_14265 PF11898 Domain of unknown function (DUF3418) ILQ34_14265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ILQ34_14265 PF00270 DEAD/DEAH box helicase ILQ34_14290 PF02698 DUF218 domain ILQ34_14295 PF00171 Aldehyde dehydrogenase family ILQ34_14300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ILQ34_14300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ILQ34_14305 PF01292 Prokaryotic cytochrome b561 ILQ34_14315 PF01848 Hok/gef family ILQ34_14320 PF02203 Tar ligand binding domain homologue ILQ34_14320 PF00672 HAMP domain ILQ34_14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ34_14325 PF03466 LysR substrate binding domain ILQ34_14325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_14330 PF07063 Domain of unknown function (DUF1338) ILQ34_14335 PF04349 Periplasmic glucan biosynthesis protein, MdoG ILQ34_14340 PF04325 Protein of unknown function (DUF465) ILQ34_14350 PF18836 Beta solenoid repeat from YDCK ILQ34_14355 PF03595 Voltage-dependent anion channel ILQ34_14360 PF03848 Tellurite resistance protein TehB ILQ34_14365 PF11769 Protein of unknown function (DUF3313) ILQ34_14370 PF03594 Benzoate membrane transport protein ILQ34_14375 PF01381 Helix-turn-helix ILQ34_14375 PF07883 Cupin domain ILQ34_14380 PF12392 Collagenase ILQ34_14380 PF01136 Peptidase family U32 ILQ34_14385 PF10829 Protein of unknown function (DUF2554) ILQ34_14390 PF07927 HicA toxin of bacterial toxin-antitoxin, ILQ34_14395 PF01381 Helix-turn-helix ILQ34_14395 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ILQ34_14400 PF00155 Aminotransferase class I and II ILQ34_14400 PF00392 Bacterial regulatory proteins, gntR family ILQ34_14405 PF13416 Bacterial extracellular solute-binding protein ILQ34_14410 PF08402 TOBE domain ILQ34_14410 PF00005 ABC transporter ILQ34_14415 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_14420 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_14425 PF00171 Aldehyde dehydrogenase family ILQ34_14435 PF10753 Toxin GhoT_OrtT ILQ34_14440 PF10735 Protein of unknown function (DUF2526) ILQ34_14445 PF04657 Putative inner membrane exporter, YdcZ ILQ34_14450 PF00583 Acetyltransferase (GNAT) family ILQ34_14455 PF16884 N-terminal domain of oxidoreductase ILQ34_14455 PF00107 Zinc-binding dehydrogenase ILQ34_14460 PF00392 Bacterial regulatory proteins, gntR family ILQ34_14460 PF07729 FCD domain ILQ34_14465 PF00593 TonB dependent receptor ILQ34_14465 PF07715 TonB-dependent Receptor Plug Domain ILQ34_14475 PF00324 Amino acid permease ILQ34_14480 PF13417 Glutathione S-transferase, N-terminal domain ILQ34_14485 PF17520 Family of unknown function (DUF5445) ILQ34_14490 PF04717 Type VI secretion system, phage-baseplate injector ILQ34_14495 PF05593 RHS Repeat ILQ34_14495 PF03527 RHS protein ILQ34_14495 PF14220 Domain of unknown function (DUF4329) ILQ34_14520 PF01361 Tautomerase enzyme ILQ34_14525 PF01613 Flavin reductase like domain ILQ34_14535 PF02567 Phenazine biosynthesis-like protein ILQ34_14540 PF02665 Nitrate reductase gamma subunit ILQ34_14545 PF02613 Nitrate reductase delta subunit ILQ34_14550 PF13247 4Fe-4S dicluster domain ILQ34_14550 PF14711 Respiratory nitrate reductase beta C-terminal ILQ34_14555 PF00384 Molybdopterin oxidoreductase ILQ34_14555 PF01568 Molydopterin dinucleotide binding domain ILQ34_14555 PF14710 Respiratory nitrate reductase alpha N-terminal ILQ34_14560 PF07690 Major Facilitator Superfamily ILQ34_14580 PF00267 Gram-negative porin ILQ34_14585 PF00892 EamA-like transporter family ILQ34_14595 PF12800 4Fe-4S binding domain ILQ34_14595 PF09163 Formate dehydrogenase N, transmembrane ILQ34_14595 PF13247 4Fe-4S dicluster domain ILQ34_14600 PF01292 Prokaryotic cytochrome b561 ILQ34_14605 PF01381 Helix-turn-helix ILQ34_14610 PF00107 Zinc-binding dehydrogenase ILQ34_14610 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_14615 PF03949 Malic enzyme, NAD binding domain ILQ34_14615 PF00390 Malic enzyme, N-terminal domain ILQ34_14620 PF08136 30S ribosomal protein subunit S22 family ILQ34_14625 PF10684 Putative biofilm-dependent modulation protein ILQ34_14630 PF02566 OsmC-like protein ILQ34_14635 PF00005 ABC transporter ILQ34_14635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_14640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_14640 PF00005 ABC transporter ILQ34_14645 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ34_14645 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_14650 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_14655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_14660 PF01427 D-ala-D-ala dipeptidase ILQ34_14670 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_14680 PF02638 Glycosyl hydrolase-like 10 ILQ34_14685 PF13520 Amino acid permease ILQ34_14690 PF00282 Pyridoxal-dependent decarboxylase conserved domain ILQ34_14695 PF00675 Insulinase (Peptidase family M16) ILQ34_14695 PF05193 Peptidase M16 inactive domain ILQ34_14700 PF07715 TonB-dependent Receptor Plug Domain ILQ34_14705 PF00005 ABC transporter ILQ34_14705 PF06472 ABC transporter transmembrane region 2 ILQ34_14715 PF13186 Iron-sulfur cluster-binding domain ILQ34_14715 PF04055 Radical SAM superfamily ILQ34_14720 PF00884 Sulfatase ILQ34_14725 PF12833 Helix-turn-helix domain ILQ34_14730 PF17073 Two-component-system connector protein ILQ34_14750 PF03797 Autotransporter beta-domain ILQ34_14755 PF13018 Extended Signal Peptide of Type V secretion system ILQ34_14760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ34_14760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ34_14765 PF04198 Putative sugar-binding domain ILQ34_14770 PF00005 ABC transporter ILQ34_14775 PF02653 Branched-chain amino acid transport system / permease component ILQ34_14780 PF02653 Branched-chain amino acid transport system / permease component ILQ34_14785 PF13407 Periplasmic binding protein domain ILQ34_14790 PF01791 DeoC/LacD family aldolase ILQ34_14795 PF03992 Antibiotic biosynthesis monooxygenase ILQ34_14800 PF13649 Methyltransferase domain ILQ34_14805 PF01062 Bestrophin, RFP-TM, chloride channel ILQ34_14810 PF08125 Mannitol dehydrogenase C-terminal domain ILQ34_14810 PF01232 Mannitol dehydrogenase Rossmann domain ILQ34_14815 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_14820 PF13811 Domain of unknown function (DUF4186) ILQ34_14825 PF04960 Glutaminase ILQ34_14830 PF00171 Aldehyde dehydrogenase family ILQ34_14835 PF03466 LysR substrate binding domain ILQ34_14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_14850 PF07690 Major Facilitator Superfamily ILQ34_14855 PF01914 MarC family integral membrane protein ILQ34_14860 PF01047 MarR family ILQ34_14865 PF12833 Helix-turn-helix domain ILQ34_14870 PF13999 MarB protein ILQ34_14875 PF00892 EamA-like transporter family ILQ34_14880 PF07690 Major Facilitator Superfamily ILQ34_14890 PF01965 DJ-1/PfpI family ILQ34_14900 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_14905 PF04076 Bacterial OB fold (BOF) protein ILQ34_14910 PF02464 Competence-damaged protein ILQ34_14915 PF01432 Peptidase family M3 ILQ34_14920 PF00106 short chain dehydrogenase ILQ34_14925 PF07729 FCD domain ILQ34_14925 PF00392 Bacterial regulatory proteins, gntR family ILQ34_14930 PF14001 YdfZ protein ILQ34_14935 PF01232 Mannitol dehydrogenase Rossmann domain ILQ34_14935 PF08125 Mannitol dehydrogenase C-terminal domain ILQ34_14945 PF06183 DinI-like family ILQ34_14965 PF03335 Phage tail fibre repeat ILQ34_14965 PF08400 Prophage tail fibre N-terminal ILQ34_14965 PF07484 Phage Tail Collar Domain ILQ34_14970 PF06316 Enterobacterial Ail/Lom protein ILQ34_15075 PF00959 Phage lysozyme ILQ34_15080 PF04971 Bacteriophage P21 holin S ILQ34_15100 PF01555 DNA methylase ILQ34_15110 PF03589 Antitermination protein ILQ34_15115 PF05866 Endodeoxyribonuclease RusA ILQ34_15120 PF06147 Protein of unknown function (DUF968) ILQ34_15130 PF09015 NgoMIV restriction enzyme ILQ34_15135 PF00145 C-5 cytosine-specific DNA methylase ILQ34_15140 PF02677 Epoxyqueuosine reductase QueH ILQ34_15150 PF07789 Protein of unknown function (DUF1627) ILQ34_15155 PF01695 IstB-like ATP binding protein ILQ34_15180 PF07151 Protein of unknown function (DUF1391) ILQ34_15195 PF05358 DicB protein ILQ34_15205 PF06630 Enterobacterial exodeoxyribonuclease VIII ILQ34_15205 PF12684 PDDEXK-like domain of unknown function (DUF3799) ILQ34_15215 PF12167 Arm DNA-binding domain ILQ34_15215 PF00589 Phage integrase family ILQ34_15220 PF06183 DinI-like family ILQ34_15245 PF07484 Phage Tail Collar Domain ILQ34_15245 PF03335 Phage tail fibre repeat ILQ34_15245 PF08400 Prophage tail fibre N-terminal ILQ34_15250 PF06316 Enterobacterial Ail/Lom protein ILQ34_15320 PF03864 Phage major capsid protein E ILQ34_15330 PF01957 NfeD-like C-terminal, partner-binding ILQ34_15330 PF01972 Serine dehydrogenase proteinase ILQ34_15340 PF02831 gpW ILQ34_15345 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_15350 PF07471 Phage DNA packaging protein Nu1 ILQ34_15355 PF13132 Domain of unknown function (DUF3950) ILQ34_15360 PF06069 PerC transcriptional activator ILQ34_15365 PF06085 Lipoprotein Rz1 precursor ILQ34_15380 PF00959 Phage lysozyme ILQ34_15385 PF07041 Protein of unknown function (DUF1327) ILQ34_15390 PF04971 Bacteriophage P21 holin S ILQ34_15420 PF12833 Helix-turn-helix domain ILQ34_15435 PF05866 Endodeoxyribonuclease RusA ILQ34_15440 PF06147 Protein of unknown function (DUF968) ILQ34_15450 PF04076 Bacterial OB fold (BOF) protein ILQ34_15455 PF01848 Hok/gef family ILQ34_15485 PF07789 Protein of unknown function (DUF1627) ILQ34_15515 PF07151 Protein of unknown function (DUF1391) ILQ34_15530 PF05358 DicB protein ILQ34_15535 PF07358 Protein of unknown function (DUF1482) ILQ34_15550 PF06183 DinI-like family ILQ34_15565 PF05717 IS66 Orf2 like protein ILQ34_15570 PF13817 IS66 C-terminal element ILQ34_15570 PF03050 Transposase IS66 family ILQ34_15570 PF13007 Transposase C of IS166 homeodomain ILQ34_15570 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_15595 PF07484 Phage Tail Collar Domain ILQ34_15595 PF03335 Phage tail fibre repeat ILQ34_15595 PF08400 Prophage tail fibre N-terminal ILQ34_15600 PF06316 Enterobacterial Ail/Lom protein ILQ34_15690 PF13132 Domain of unknown function (DUF3950) ILQ34_15710 PF00959 Phage lysozyme ILQ34_15715 PF07041 Protein of unknown function (DUF1327) ILQ34_15720 PF04971 Bacteriophage P21 holin S ILQ34_15725 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_15760 PF05866 Endodeoxyribonuclease RusA ILQ34_15765 PF06147 Protein of unknown function (DUF968) ILQ34_15775 PF01848 Hok/gef family ILQ34_15800 PF01695 IstB-like ATP binding protein ILQ34_15855 PF05358 DicB protein ILQ34_15860 PF07358 Protein of unknown function (DUF1482) ILQ34_15875 PF00589 Phage integrase family ILQ34_15875 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ34_15880 PF03922 OmpW family ILQ34_15895 PF04279 Intracellular septation protein A ILQ34_15900 PF03061 Thioesterase superfamily ILQ34_15905 PF03544 Gram-negative bacterial TonB protein C-terminal ILQ34_15910 PF03795 YCII-related domain ILQ34_15915 PF07885 Ion channel ILQ34_15915 PF02254 TrkA-N domain ILQ34_15925 PF13091 PLD-like domain ILQ34_15925 PF13396 Phospholipase_D-nuclease N-terminal ILQ34_15930 PF04269 Protein of unknown function, DUF440 ILQ34_15935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_15935 PF00005 ABC transporter ILQ34_15940 PF00005 ABC transporter ILQ34_15940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_15945 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_15945 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ34_15950 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_15955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_15960 PF01914 MarC family integral membrane protein ILQ34_15965 PF00171 Aldehyde dehydrogenase family ILQ34_15965 PF00465 Iron-containing alcohol dehydrogenase ILQ34_15970 PF00265 Thymidine kinase ILQ34_15975 PF00816 H-NS histone family ILQ34_15980 PF00483 Nucleotidyl transferase ILQ34_15985 PF00072 Response regulator receiver domain ILQ34_15990 PF01734 Patatin-like phospholipase ILQ34_15995 PF02810 SEC-C motif ILQ34_16000 PF00551 Formyl transferase ILQ34_16000 PF01842 ACT domain ILQ34_16030 PF02665 Nitrate reductase gamma subunit ILQ34_16035 PF02613 Nitrate reductase delta subunit ILQ34_16040 PF14711 Respiratory nitrate reductase beta C-terminal ILQ34_16040 PF13247 4Fe-4S dicluster domain ILQ34_16045 PF14710 Respiratory nitrate reductase alpha N-terminal ILQ34_16045 PF01568 Molydopterin dinucleotide binding domain ILQ34_16045 PF00384 Molybdopterin oxidoreductase ILQ34_16050 PF07690 Major Facilitator Superfamily ILQ34_16055 PF00672 HAMP domain ILQ34_16055 PF07730 Histidine kinase ILQ34_16055 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ILQ34_16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_16060 PF00196 Bacterial regulatory proteins, luxR family ILQ34_16060 PF00072 Response regulator receiver domain ILQ34_16065 PF11924 Inverse autotransporter, beta-domain ILQ34_16070 PF02635 DsrE/DsrF-like family ILQ34_16075 PF04752 ChaC-like protein ILQ34_16080 PF06150 ChaB ILQ34_16085 PF01699 Sodium/calcium exchanger protein ILQ34_16090 PF13940 Toxin Ldr, type I toxin-antitoxin system ILQ34_16095 PF13940 Toxin Ldr, type I toxin-antitoxin system ILQ34_16100 PF00793 DAHP synthetase I family ILQ34_16105 PF13369 Transglutaminase-like superfamily ILQ34_16110 PF04247 Invasion gene expression up-regulator, SirB ILQ34_16115 PF13847 Methyltransferase domain ILQ34_16115 PF17827 PrmC N-terminal domain ILQ34_16120 PF00472 RF-1 domain ILQ34_16120 PF03462 PCRF domain ILQ34_16125 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ILQ34_16125 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ILQ34_16125 PF01488 Shikimate / quinate 5-dehydrogenase ILQ34_16130 PF03550 Outer membrane lipoprotein LolB ILQ34_16135 PF08544 GHMP kinases C terminal ILQ34_16135 PF00288 GHMP kinases N terminal domain ILQ34_16140 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ILQ34_16140 PF14572 Phosphoribosyl synthetase-associated domain ILQ34_16145 PF01740 STAS domain ILQ34_16145 PF00916 Sulfate permease family ILQ34_16150 PF10762 Protein of unknown function (DUF2583) ILQ34_16155 PF01195 Peptidyl-tRNA hydrolase ILQ34_16160 PF01926 50S ribosome-binding GTPase ILQ34_16160 PF06071 Protein of unknown function (DUF933) ILQ34_16170 PF02733 Dak1 domain ILQ34_16175 PF02734 DAK2 domain ILQ34_16180 PF03610 PTS system fructose IIA component ILQ34_16180 PF05524 PEP-utilising enzyme, N-terminal ILQ34_16180 PF00391 PEP-utilising enzyme, mobile domain ILQ34_16180 PF00381 PTS HPr component phosphorylation site ILQ34_16190 PF01497 Periplasmic binding protein ILQ34_16195 PF01032 FecCD transport family ILQ34_16200 PF00005 ABC transporter ILQ34_16210 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ILQ34_16210 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ILQ34_16220 PF04226 Transglycosylase associated protein ILQ34_16240 PF01464 Transglycosylase SLT domain ILQ34_16245 PF17676 LD-carboxypeptidase C-terminal domain ILQ34_16245 PF02016 LD-carboxypeptidase N-terminal domain ILQ34_16250 PF02080 TrkA-C domain ILQ34_16250 PF00999 Sodium/hydrogen exchanger family ILQ34_16250 PF03471 Transporter associated domain ILQ34_16260 PF01168 Alanine racemase, N-terminal domain ILQ34_16260 PF00842 Alanine racemase, C-terminal domain ILQ34_16265 PF01266 FAD dependent oxidoreductase ILQ34_16270 PF04293 SpoVR like protein ILQ34_16275 PF07840 FadR C-terminal domain ILQ34_16275 PF00392 Bacterial regulatory proteins, gntR family ILQ34_16280 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ILQ34_16285 PF02600 Disulfide bond formation protein DsbB ILQ34_16290 PF11798 IMS family HHH motif ILQ34_16290 PF13438 Domain of unknown function (DUF4113) ILQ34_16290 PF11799 impB/mucB/samB family C-terminal domain ILQ34_16290 PF00817 impB/mucB/samB family ILQ34_16295 PF00717 Peptidase S24-like ILQ34_16300 PF06109 Haemolysin E (HlyE) ILQ34_16305 PF03692 Putative zinc- or iron-chelating domain ILQ34_16310 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILQ34_16315 PF05166 YcgL domain ILQ34_16325 PF04151 Bacterial pre-peptidase C-terminal domain ILQ34_16330 PF05666 Fels-1 Prophage Protein-like ILQ34_16335 PF03775 Septum formation inhibitor MinC, C-terminal domain ILQ34_16335 PF05209 Septum formation inhibitor MinC, N-terminal domain ILQ34_16340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ILQ34_16345 PF03776 Septum formation topological specificity factor MinE ILQ34_16365 PF01278 Omptin family ILQ34_16370 PF00561 alpha/beta hydrolase fold ILQ34_16375 PF13817 IS66 C-terminal element ILQ34_16375 PF13007 Transposase C of IS166 homeodomain ILQ34_16375 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_16375 PF03050 Transposase IS66 family ILQ34_16380 PF05717 IS66 Orf2 like protein ILQ34_16390 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_16395 PF08242 Methyltransferase domain ILQ34_16400 PF10685 Stress-induced bacterial acidophilic repeat motif ILQ34_16405 PF05974 Domain of unknown function (DUF892) ILQ34_16410 PF05974 Domain of unknown function (DUF892) ILQ34_16415 PF05067 Manganese containing catalase ILQ34_16420 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_16425 PF08400 Prophage tail fibre N-terminal ILQ34_16425 PF07484 Phage Tail Collar Domain ILQ34_16425 PF03335 Phage tail fibre repeat ILQ34_16430 PF06316 Enterobacterial Ail/Lom protein ILQ34_16460 PF06791 Prophage tail length tape measure protein ILQ34_16500 PF03864 Phage major capsid protein E ILQ34_16510 PF01957 NfeD-like C-terminal, partner-binding ILQ34_16510 PF01972 Serine dehydrogenase proteinase ILQ34_16520 PF02831 gpW ILQ34_16525 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_16530 PF07471 Phage DNA packaging protein Nu1 ILQ34_16535 PF13132 Domain of unknown function (DUF3950) ILQ34_16545 PF07166 Protein of unknown function (DUF1398) ILQ34_16550 PF06291 Bor protein ILQ34_16555 PF06085 Lipoprotein Rz1 precursor ILQ34_16580 PF05866 Endodeoxyribonuclease RusA ILQ34_16585 PF07102 Protein of unknown function (DUF1364) ILQ34_16600 PF07508 Recombinase ILQ34_16600 PF00239 Resolvase, N terminal domain ILQ34_16600 PF13408 Recombinase zinc beta ribbon domain ILQ34_16610 PF00893 Small Multidrug Resistance protein ILQ34_16620 PF06992 Replication protein P ILQ34_16635 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ34_16635 PF00589 Phage integrase family ILQ34_16640 PF00180 Isocitrate/isopropylmalate dehydrogenase ILQ34_16645 PF00849 RNA pseudouridylate synthase ILQ34_16650 PF00293 NUDIX domain ILQ34_16660 PF04356 Protein of unknown function (DUF489) ILQ34_16665 PF00206 Lyase ILQ34_16665 PF08328 Adenylosuccinate lyase C-terminal ILQ34_16670 PF00072 Response regulator receiver domain ILQ34_16670 PF00486 Transcriptional regulatory protein, C terminal ILQ34_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_16675 PF08918 PhoQ Sensor ILQ34_16685 PF07471 Phage DNA packaging protein Nu1 ILQ34_16700 PF03864 Phage major capsid protein E ILQ34_16715 PF06069 PerC transcriptional activator ILQ34_16775 PF08007 Cupin superfamily protein ILQ34_16780 PF07687 Peptidase dimerisation domain ILQ34_16780 PF01546 Peptidase family M20/M25/M40 ILQ34_16785 PF00005 ABC transporter ILQ34_16785 PF08402 TOBE domain ILQ34_16790 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_16945 PF13132 Domain of unknown function (DUF3950) ILQ34_16975 PF00959 Phage lysozyme ILQ34_16980 PF07041 Protein of unknown function (DUF1327) ILQ34_16985 PF04971 Bacteriophage P21 holin S ILQ34_17000 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_17015 PF03589 Antitermination protein ILQ34_17020 PF05866 Endodeoxyribonuclease RusA ILQ34_17025 PF06147 Protein of unknown function (DUF968) ILQ34_17035 PF01848 Hok/gef family ILQ34_17080 PF07789 Protein of unknown function (DUF1627) ILQ34_17100 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ILQ34_17110 PF07151 Protein of unknown function (DUF1391) ILQ34_17130 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ34_17130 PF00589 Phage integrase family ILQ34_17135 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_17140 PF13416 Bacterial extracellular solute-binding protein ILQ34_17145 PF02146 Sir2 family ILQ34_17150 PF00480 ROK family ILQ34_17155 PF12704 MacB-like periplasmic core domain ILQ34_17155 PF02687 FtsX-like permease family ILQ34_17160 PF00005 ABC transporter ILQ34_17165 PF02687 FtsX-like permease family ILQ34_17165 PF12704 MacB-like periplasmic core domain ILQ34_17170 PF01757 Acyltransferase family ILQ34_17175 PF17757 UvrB interaction domain ILQ34_17175 PF03461 TRCF domain ILQ34_17175 PF00270 DEAD/DEAH box helicase ILQ34_17175 PF00271 Helicase conserved C-terminal domain ILQ34_17175 PF02559 CarD-like/TRCF domain ILQ34_17180 PF17969 L,D-transpeptidase C-terminal domain ILQ34_17180 PF03734 L,D-transpeptidase catalytic domain ILQ34_17180 PF01476 LysM domain ILQ34_17185 PF07338 Protein of unknown function (DUF1471) ILQ34_17190 PF00440 Bacterial regulatory proteins, tetR family ILQ34_17195 PF05433 Glycine zipper 2TM domain ILQ34_17200 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_17205 PF05728 Uncharacterised protein family (UPF0227) ILQ34_17210 PF00933 Glycosyl hydrolase family 3 N terminal domain ILQ34_17215 PF01636 Phosphotransferase enzyme family ILQ34_17220 PF13036 Peptidoglycan-synthase activator LpoB ILQ34_17225 PF07233 Protein of unknown function (DUF1425) ILQ34_17230 PF01230 HIT domain ILQ34_17240 PF07715 TonB-dependent Receptor Plug Domain ILQ34_17240 PF00593 TonB dependent receptor ILQ34_17245 PF02378 Phosphotransferase system, EIIC ILQ34_17245 PF00367 phosphotransferase system, EIIB ILQ34_17250 PF01026 TatD related DNase ILQ34_17255 PF09115 DNA polymerase III, delta subunit, C terminal ILQ34_17260 PF02223 Thymidylate kinase ILQ34_17265 PF02618 YceG-like family ILQ34_17270 PF01063 Amino-transferase class IV ILQ34_17275 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ34_17275 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ34_17280 PF00550 Phosphopantetheine attachment site ILQ34_17290 PF00698 Acyl transferase domain ILQ34_17295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ILQ34_17295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ILQ34_17300 PF02504 Fatty acid synthesis protein ILQ34_17305 PF01783 Ribosomal L32p protein family ILQ34_17310 PF02620 Large ribosomal RNA subunit accumulation protein YceD ILQ34_17315 PF02545 Maf-like protein ILQ34_17320 PF01479 S4 domain ILQ34_17320 PF00849 RNA pseudouridylate synthase ILQ34_17325 PF12111 Polyribonucleotide phosphorylase C terminal ILQ34_17325 PF10150 Ribonuclease E/G family ILQ34_17325 PF00575 S1 RNA binding domain ILQ34_17330 PF00669 Bacterial flagellin N-terminal helical region ILQ34_17335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ34_17335 PF00460 Flagella basal body rod protein ILQ34_17340 PF10135 Rod binding protein ILQ34_17340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ILQ34_17345 PF02119 Flagellar P-ring protein ILQ34_17350 PF02107 Flagellar L-ring protein ILQ34_17355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ34_17355 PF00460 Flagella basal body rod protein ILQ34_17360 PF00460 Flagella basal body rod protein ILQ34_17360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ34_17365 PF00460 Flagella basal body rod protein ILQ34_17365 PF07559 Flagellar basal body protein FlaE ILQ34_17365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ34_17370 PF13860 FlgD Ig-like domain ILQ34_17370 PF13861 FlgD Tudor-like domain ILQ34_17370 PF03963 Flagellar hook capping protein - N-terminal region ILQ34_17375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ILQ34_17375 PF00460 Flagella basal body rod protein ILQ34_17380 PF00460 Flagella basal body rod protein ILQ34_17385 PF13144 Chaperone for flagella basal body P-ring formation ILQ34_17390 PF04316 Anti-sigma-28 factor, FlgM ILQ34_17395 PF05130 FlgN protein ILQ34_17400 PF03023 Lipid II flippase MurJ ILQ34_17405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ILQ34_17410 PF04337 Protein of unknown function, DUF480 ILQ34_17415 PF13302 Acetyltransferase (GNAT) domain ILQ34_17420 PF07690 Major Facilitator Superfamily ILQ34_17425 PF13417 Glutathione S-transferase, N-terminal domain ILQ34_17425 PF04399 Glutaredoxin 2, C terminal domain ILQ34_17430 PF07273 Protein of unknown function (DUF1439) ILQ34_17435 PF01979 Amidohydrolase family ILQ34_17440 PF06183 DinI-like family ILQ34_17445 PF13991 BssS protein family ILQ34_17450 PF01266 FAD dependent oxidoreductase ILQ34_17455 PF10968 Protein of unknown function (DUF2770) ILQ34_17460 PF01292 Prokaryotic cytochrome b561 ILQ34_17465 PF04264 YceI-like domain ILQ34_17470 PF00581 Rhodanese-like domain ILQ34_17470 PF12368 Rhodanase C-terminal ILQ34_17470 PF17773 UPF0176 acylphosphatase like domain ILQ34_17475 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ34_17485 PF13984 MsyB protein ILQ34_17490 PF07119 Protein of unknown function (DUF1375) ILQ34_17495 PF00535 Glycosyl transferase family 2 ILQ34_17500 PF04349 Periplasmic glucan biosynthesis protein, MdoG ILQ34_17505 PF01757 Acyltransferase family ILQ34_17510 PF13091 PLD-like domain ILQ34_17515 PF01661 Macro domain ILQ34_17525 PF10610 Thin aggregative fimbriae synthesis protein ILQ34_17530 PF07012 Curlin associated repeat ILQ34_17535 PF07012 Curlin associated repeat ILQ34_17540 PF00196 Bacterial regulatory proteins, luxR family ILQ34_17545 PF10627 Curli assembly protein CsgE ILQ34_17550 PF10614 Type VIII secretion system (T8SS), CsgF protein ILQ34_17555 PF03783 Curli production assembly/transport component CsgG ILQ34_17560 PF06496 Protein of unknown function (DUF1097) ILQ34_17565 PF02613 Nitrate reductase delta subunit ILQ34_17570 PF02811 PHP domain ILQ34_17575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ILQ34_17600 PF06755 CbtA_toxin of type IV toxin-antitoxin system ILQ34_17605 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ILQ34_17610 PF06174 Protein of unknown function (DUF987) ILQ34_17615 PF04002 RadC-like JAB domain ILQ34_17620 PF03230 Antirestriction protein ILQ34_17625 PF06067 Domain of unknown function (DUF932) ILQ34_17635 PF13990 YjcZ-like protein ILQ34_17640 PF00350 Dynamin family ILQ34_17645 PF03797 Autotransporter beta-domain ILQ34_17645 PF16168 Adhesin of bacterial autotransporter system, probable stalk ILQ34_17645 PF13018 Extended Signal Peptide of Type V secretion system ILQ34_17685 PF02195 ParB-like nuclease domain ILQ34_17690 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ34_17690 PF11922 Domain of unknown function (DUF3440) ILQ34_17695 PF13195 Protein of unknown function (DUF4011) ILQ34_17695 PF13086 AAA domain ILQ34_17695 PF13087 AAA domain ILQ34_17705 PF08479 POTRA domain, ShlB-type ILQ34_17705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ILQ34_17705 PF17287 POTRA domain ILQ34_17750 PF06722 Protein of unknown function (DUF1205) ILQ34_17790 PF00593 TonB dependent receptor ILQ34_17790 PF07715 TonB-dependent Receptor Plug Domain ILQ34_17800 PF02342 TerD domain ILQ34_17805 PF02342 TerD domain ILQ34_17810 PF02342 TerD domain ILQ34_17815 PF03741 Integral membrane protein TerC family ILQ34_17820 PF05099 Tellurite resistance protein TerB ILQ34_17825 PF02342 TerD domain ILQ34_17830 PF02342 TerD domain ILQ34_17850 PF11202 Phosphoribosyl transferase (PRTase) ILQ34_17850 PF15608 PELOTA RNA binding domain ILQ34_17885 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_17885 PF03050 Transposase IS66 family ILQ34_17885 PF13817 IS66 C-terminal element ILQ34_17885 PF13007 Transposase C of IS166 homeodomain ILQ34_17890 PF05717 IS66 Orf2 like protein ILQ34_17920 PF01197 Ribosomal protein L31 ILQ34_17935 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ34_17940 PF01730 UreF ILQ34_17945 PF02814 UreE urease accessory protein, N-terminal domain ILQ34_17945 PF05194 UreE urease accessory protein, C-terminal domain ILQ34_17950 PF01979 Amidohydrolase family ILQ34_17950 PF00449 Urease alpha-subunit, N-terminal domain ILQ34_17955 PF00699 Urease beta subunit ILQ34_17960 PF00547 Urease, gamma subunit ILQ34_17965 PF01774 UreD urease accessory protein ILQ34_17975 PF08019 Phosphoethanolamine transferase EptA/EptB ILQ34_17975 PF00884 Sulfatase ILQ34_17980 PF01219 Prokaryotic diacylglycerol kinase ILQ34_17995 PF05818 Enterobacterial TraT complement resistance protein ILQ34_18015 PF05717 IS66 Orf2 like protein ILQ34_18020 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_18020 PF13007 Transposase C of IS166 homeodomain ILQ34_18020 PF13817 IS66 C-terminal element ILQ34_18020 PF03050 Transposase IS66 family ILQ34_18045 PF13148 Protein of unknown function (DUF3987) ILQ34_18070 PF13356 Arm DNA-binding domain ILQ34_18070 PF00589 Phage integrase family ILQ34_18105 PF00005 ABC transporter ILQ34_18120 PF00109 Beta-ketoacyl synthase, N-terminal domain ILQ34_18120 PF02801 Beta-ketoacyl synthase, C-terminal domain ILQ34_18125 PF08669 Glycine cleavage T-protein C-terminal barrel domain ILQ34_18125 PF01571 Aminomethyltransferase folate-binding domain ILQ34_18135 PF07977 FabA-like domain ILQ34_18140 PF00106 short chain dehydrogenase ILQ34_18145 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ34_18150 PF17287 POTRA domain ILQ34_18150 PF08479 POTRA domain, ShlB-type ILQ34_18150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ILQ34_18155 PF13018 Extended Signal Peptide of Type V secretion system ILQ34_18155 PF04829 Pre-toxin domain with VENN motif ILQ34_18155 PF13332 Hemagglutinin repeat ILQ34_18155 PF05860 haemagglutination activity domain ILQ34_18165 PF16970 Type-1 fimbrial protein, A ILQ34_18170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_18170 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_18175 PF13953 PapC C-terminal domain ILQ34_18175 PF13954 PapC N-terminal domain ILQ34_18175 PF00577 Outer membrane usher protein ILQ34_18185 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_18185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_18195 PF00486 Transcriptional regulatory protein, C terminal ILQ34_18205 PF00563 EAL domain ILQ34_18205 PF12792 CSS motif domain associated with EAL ILQ34_18210 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_18210 PF17158 Membrane-associated sensor, integral membrane domain ILQ34_18220 PF01522 Polysaccharide deacetylase ILQ34_18220 PF14883 Hypothetical glycosyl hydrolase family 13 ILQ34_18225 PF00535 Glycosyl transferase family 2 ILQ34_18230 PF13994 PgaD-like protein ILQ34_18235 PF02562 PhoH-like protein ILQ34_18240 PF04261 Dyp-type peroxidase family ILQ34_18245 PF09375 Imelysin ILQ34_18245 PF13473 Cupredoxin-like domain ILQ34_18250 PF03239 Iron permease FTR1 family ILQ34_18260 PF00474 Sodium:solute symporter family ILQ34_18270 PF14850 DNA-binding domain of Proline dehydrogenase ILQ34_18270 PF01619 Proline dehydrogenase ILQ34_18270 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ILQ34_18270 PF00171 Aldehyde dehydrogenase family ILQ34_18275 PF00440 Bacterial regulatory proteins, tetR family ILQ34_18275 PF08362 YcdC-like protein, C-terminal region ILQ34_18280 PF00296 Luciferase-like monooxygenase ILQ34_18285 PF00857 Isochorismatase family ILQ34_18290 PF01042 Endoribonuclease L-PSP ILQ34_18295 PF12146 Serine aminopeptidase, S33 ILQ34_18300 PF00881 Nitroreductase family ILQ34_18305 PF01613 Flavin reductase like domain ILQ34_18310 PF00860 Permease family ILQ34_18315 PF10685 Stress-induced bacterial acidophilic repeat motif ILQ34_18320 PF03358 NADPH-dependent FMN reductase ILQ34_18325 PF13993 YccJ-like protein ILQ34_18330 PF00328 Histidine phosphatase superfamily (branch 2) ILQ34_18340 PF00226 DnaJ domain ILQ34_18340 PF01556 DnaJ C terminal domain ILQ34_18350 PF02613 Nitrate reductase delta subunit ILQ34_18355 PF01568 Molydopterin dinucleotide binding domain ILQ34_18355 PF18364 Molybdopterin oxidoreductase N-terminal domain ILQ34_18355 PF00384 Molybdopterin oxidoreductase ILQ34_18360 PF03264 NapC/NirT cytochrome c family, N-terminal region ILQ34_18365 PF00072 Response regulator receiver domain ILQ34_18365 PF00486 Transcriptional regulatory protein, C terminal ILQ34_18370 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ34_18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_18375 PF00072 Response regulator receiver domain ILQ34_18375 PF01627 Hpt domain ILQ34_18375 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_18375 PF00672 HAMP domain ILQ34_18380 PF12801 4Fe-4S binding domain ILQ34_18385 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system ILQ34_18390 PF15939 Putative antitoxin of bacterial toxin-antitoxin system ILQ34_18400 PF00313 'Cold-shock' DNA-binding domain ILQ34_18405 PF00313 'Cold-shock' DNA-binding domain ILQ34_18415 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF ILQ34_18420 PF06251 Capsule biosynthesis GfcC ILQ34_18425 PF06082 Exopolysaccharide biosynthesis protein YbjH ILQ34_18430 PF02563 Polysaccharide biosynthesis/export protein ILQ34_18430 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ILQ34_18430 PF10531 SLBB domain ILQ34_18435 PF01451 Low molecular weight phosphotyrosine protein phosphatase ILQ34_18440 PF02706 Chain length determinant protein ILQ34_18440 PF13614 AAA domain ILQ34_18440 PF13807 G-rich domain on putative tyrosine kinase ILQ34_18445 PF00328 Histidine phosphatase superfamily (branch 2) ILQ34_18450 PF08173 Membrane bound YbgT-like protein ILQ34_18455 PF02322 Cytochrome bd terminal oxidase subunit II ILQ34_18460 PF01654 Cytochrome bd terminal oxidase subunit I ILQ34_18465 PF04809 HupH hydrogenase expression protein, C-terminal conserved region ILQ34_18470 PF07449 Hydrogenase-1 expression protein HyaE ILQ34_18475 PF01750 Hydrogenase maturation protease ILQ34_18480 PF01292 Prokaryotic cytochrome b561 ILQ34_18485 PF00374 Nickel-dependent hydrogenase ILQ34_18490 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ILQ34_18490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ILQ34_18510 PF07484 Phage Tail Collar Domain ILQ34_18510 PF08400 Prophage tail fibre N-terminal ILQ34_18510 PF03335 Phage tail fibre repeat ILQ34_18515 PF06316 Enterobacterial Ail/Lom protein ILQ34_18525 PF00080 Copper/zinc superoxide dismutase (SODC) ILQ34_18570 PF03864 Phage major capsid protein E ILQ34_18580 PF01343 Peptidase family S49 ILQ34_18590 PF02831 gpW ILQ34_18605 PF13817 IS66 C-terminal element ILQ34_18605 PF13007 Transposase C of IS166 homeodomain ILQ34_18605 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_18605 PF03050 Transposase IS66 family ILQ34_18610 PF05717 IS66 Orf2 like protein ILQ34_18625 PF04971 Bacteriophage P21 holin S ILQ34_18635 PF00959 Phage lysozyme ILQ34_18650 PF06069 PerC transcriptional activator ILQ34_18655 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_18675 PF12833 Helix-turn-helix domain ILQ34_18690 PF06530 Phage antitermination protein Q ILQ34_18695 PF05866 Endodeoxyribonuclease RusA ILQ34_18700 PF06147 Protein of unknown function (DUF968) ILQ34_18710 PF01848 Hok/gef family ILQ34_18725 PF07789 Protein of unknown function (DUF1627) ILQ34_18730 PF01695 IstB-like ATP binding protein ILQ34_18755 PF01381 Helix-turn-helix ILQ34_18755 PF00717 Peptidase S24-like ILQ34_18770 PF07151 Protein of unknown function (DUF1391) ILQ34_18785 PF05358 DicB protein ILQ34_18790 PF07358 Protein of unknown function (DUF1482) ILQ34_18810 PF01027 Inhibitor of apoptosis-promoting Bax1 ILQ34_18815 PF04358 DsrC like protein ILQ34_18820 PF00708 Acylphosphatase ILQ34_18825 PF17785 PUA-like domain ILQ34_18825 PF10672 S-adenosylmethionine-dependent methyltransferase ILQ34_18830 PF08755 Hemimethylated DNA-binding protein YccV like ILQ34_18835 PF13380 CoA binding domain ILQ34_18840 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ILQ34_18845 PF02142 MGS-like domain ILQ34_18850 PF12462 DNA helicase IV / RNA helicase N terminal ILQ34_18850 PF00580 UvrD/REP helicase N-terminal domain ILQ34_18850 PF13361 UvrD-like helicase C-terminal domain ILQ34_18855 PF03733 Inner membrane component domain ILQ34_18860 PF12805 FUSC-like inner membrane protein yccS ILQ34_18865 PF04993 TfoX N-terminal domain ILQ34_18865 PF04994 TfoX C-terminal domain ILQ34_18870 PF03846 Cell division inhibitor SulA ILQ34_18875 PF01389 OmpA-like transmembrane domain ILQ34_18875 PF00691 OmpA family ILQ34_18880 PF06303 MatP N-terminal domain ILQ34_18880 PF17414 MatP C-terminal ribbon-helix-helix domain ILQ34_18885 PF13654 AAA domain ILQ34_18885 PF05362 Lon protease (S16) C-terminal proteolytic domain ILQ34_18890 PF07977 FabA-like domain ILQ34_18895 PF04957 Ribosome modulation factor ILQ34_18900 PF03886 ABC-type transport auxiliary lipoprotein component ILQ34_18905 PF02470 MlaD protein ILQ34_18910 PF04403 Paraquat-inducible protein A ILQ34_18915 PF12848 ABC transporter ILQ34_18915 PF16326 ABC transporter C-terminal domain ILQ34_18915 PF00005 ABC transporter ILQ34_18920 PF02926 THUMP domain ILQ34_18920 PF01170 Putative RNA methylase family UPF0020 ILQ34_18920 PF10672 S-adenosylmethionine-dependent methyltransferase ILQ34_18925 PF03476 MOSC N-terminal beta barrel domain ILQ34_18925 PF03473 MOSC domain ILQ34_18925 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ34_18930 PF07126 Cell-division protein ZapC ILQ34_18935 PF01180 Dihydroorotate dehydrogenase ILQ34_18945 PF00419 Fimbrial protein ILQ34_18950 PF00419 Fimbrial protein ILQ34_18955 PF00419 Fimbrial protein ILQ34_18965 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_18965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_18970 PF00419 Fimbrial protein ILQ34_18975 PF03358 NADPH-dependent FMN reductase ILQ34_18980 PF09084 NMT1/THI5 like ILQ34_18985 PF00296 Luciferase-like monooxygenase ILQ34_18990 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_18995 PF00005 ABC transporter ILQ34_19000 PF01433 Peptidase family M1 domain ILQ34_19000 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ILQ34_19000 PF11940 Domain of unknown function (DUF3458) Ig-like fold ILQ34_19005 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ILQ34_19005 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ILQ34_19010 PF01336 OB-fold nucleic acid binding domain ILQ34_19010 PF00152 tRNA synthetases class II (D, K and N) ILQ34_19015 PF00267 Gram-negative porin ILQ34_19020 PF00155 Aminotransferase class I and II ILQ34_19025 PF00753 Metallo-beta-lactamase superfamily ILQ34_19030 PF05951 Bacterial protein of unknown function (DUF882) ILQ34_19035 PF01471 Putative peptidoglycan binding domain ILQ34_19035 PF03734 L,D-transpeptidase catalytic domain ILQ34_19040 PF16330 MukB hinge domain ILQ34_19040 PF04310 MukB N-terminal ILQ34_19045 PF04288 MukE-like family ILQ34_19050 PF17192 MukF middle domain ILQ34_19050 PF17193 MukF C-terminal domain ILQ34_19050 PF03882 MukF winged-helix domain ILQ34_19060 PF02698 DUF218 domain ILQ34_19065 PF01636 Phosphotransferase enzyme family ILQ34_19070 PF02348 Cytidylyltransferase ILQ34_19075 PF03966 Trm112p-like protein ILQ34_19080 PF06224 Winged helix DNA-binding domain ILQ34_19085 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ILQ34_19090 PF00005 ABC transporter ILQ34_19090 PF00664 ABC transporter transmembrane region ILQ34_19095 PF00753 Metallo-beta-lactamase superfamily ILQ34_19095 PF03772 Competence protein ILQ34_19100 PF00216 Bacterial DNA-binding protein ILQ34_19105 PF00575 S1 RNA binding domain ILQ34_19110 PF02224 Cytidylate kinase ILQ34_19115 PF01435 Peptidase family M48 ILQ34_19120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ILQ34_19125 PF00266 Aminotransferase class-V ILQ34_19130 PF04239 Protein of unknown function (DUF421) ILQ34_19135 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ILQ34_19135 PF18381 YcaO cyclodehydratase C-terminal domain ILQ34_19140 PF01226 Formate/nitrite transporter ILQ34_19145 PF01228 Glycine radical ILQ34_19145 PF02901 Pyruvate formate lyase-like ILQ34_19150 PF04055 Radical SAM superfamily ILQ34_19160 PF13520 Amino acid permease ILQ34_19165 PF07690 Major Facilitator Superfamily ILQ34_19170 PF00857 Isochorismatase family ILQ34_19175 PF04976 DMSO reductase anchor subunit (DmsC) ILQ34_19180 PF12800 4Fe-4S binding domain ILQ34_19180 PF13247 4Fe-4S dicluster domain ILQ34_19185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ILQ34_19185 PF00384 Molybdopterin oxidoreductase ILQ34_19185 PF01568 Molydopterin dinucleotide binding domain ILQ34_19190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILQ34_19190 PF02403 Seryl-tRNA synthetase N-terminal domain ILQ34_19195 PF00004 ATPase family associated with various cellular activities (AAA) ILQ34_19195 PF12002 MgsA AAA+ ATPase C terminal ILQ34_19195 PF16193 AAA C-terminal domain ILQ34_19200 PF03548 Outer membrane lipoprotein carrier protein LolA ILQ34_19205 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ILQ34_19205 PF17854 FtsK alpha domain ILQ34_19205 PF09397 Ftsk gamma domain ILQ34_19205 PF01580 FtsK/SpoIIIE family ILQ34_19210 PF01037 Lrp/AsnC ligand binding domain ILQ34_19215 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_19220 PF00664 ABC transporter transmembrane region ILQ34_19220 PF00005 ABC transporter ILQ34_19225 PF00664 ABC transporter transmembrane region ILQ34_19225 PF00005 ABC transporter ILQ34_19230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ILQ34_19235 PF01176 Translation initiation factor 1A / IF-1 ILQ34_19245 PF17871 AAA lid domain ILQ34_19245 PF00004 ATPase family associated with various cellular activities (AAA) ILQ34_19245 PF02861 Clp amino terminal domain, pathogenicity island component ILQ34_19245 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ34_19245 PF07724 AAA domain (Cdc48 subfamily) ILQ34_19250 PF02617 ATP-dependent Clp protease adaptor protein ClpS ILQ34_19255 PF00313 'Cold-shock' DNA-binding domain ILQ34_19260 PF00005 ABC transporter ILQ34_19260 PF02687 FtsX-like permease family ILQ34_19260 PF12704 MacB-like periplasmic core domain ILQ34_19265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_19270 PF04393 Protein of unknown function (DUF535) ILQ34_19275 PF11398 Protein of unknown function (DUF2813) ILQ34_19280 PF00230 Major intrinsic protein ILQ34_19285 PF03956 Lysine exporter LysO ILQ34_19290 PF03063 Prismane/CO dehydrogenase family ILQ34_19295 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ34_19295 PF00175 Oxidoreductase NAD-binding domain ILQ34_19295 PF00970 Oxidoreductase FAD-binding domain ILQ34_19300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_19300 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ34_19300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ34_19305 PF01212 Beta-eliminating lyase ILQ34_19310 PF13460 NAD(P)H-binding ILQ34_19310 PF11066 Protein of unknown function (DUF2867) ILQ34_19315 PF01370 NAD dependent epimerase/dehydratase family ILQ34_19320 PF01510 N-acetylmuramoyl-L-alanine amidase ILQ34_19325 PF01906 Putative heavy-metal-binding ILQ34_19335 PF12883 Protein of unknown function (DUF3828) ILQ34_19340 PF00005 ABC transporter ILQ34_19345 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_19350 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_19355 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_19360 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_19375 PF03611 PTS system sugar-specific permease component ILQ34_19380 PF05958 tRNA (Uracil-5-)-methyltransferase ILQ34_19385 PF10767 Protein of unknown function (DUF2593) ILQ34_19390 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_19395 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_19400 PF00005 ABC transporter ILQ34_19400 PF08402 TOBE domain ILQ34_19405 PF13416 Bacterial extracellular solute-binding protein ILQ34_19410 PF10722 Putative bacterial sensory transduction regulator ILQ34_19415 PF18030 RimK PreATP-grasp domain ILQ34_19415 PF08443 RimK-like ATP-grasp domain ILQ34_19420 PF00881 Nitroreductase family ILQ34_19425 PF07214 Protein of unknown function (DUF1418) ILQ34_19430 PF00462 Glutaredoxin ILQ34_19435 PF11045 Putative inner membrane protein of Enterobacteriaceae ILQ34_19440 PF06826 Predicted Permease Membrane Region ILQ34_19440 PF02080 TrkA-C domain ILQ34_19445 PF00440 Bacterial regulatory proteins, tetR family ILQ34_19450 PF07690 Major Facilitator Superfamily ILQ34_19465 PF07690 Major Facilitator Superfamily ILQ34_19470 PF01569 PAP2 superfamily ILQ34_19475 PF00455 DeoR C terminal sensor domain ILQ34_19475 PF08220 DeoR-like helix-turn-helix domain ILQ34_19485 PF13417 Glutathione S-transferase, N-terminal domain ILQ34_19485 PF00043 Glutathione S-transferase, C-terminal domain ILQ34_19490 PF07995 Glucose / Sorbosone dehydrogenase ILQ34_19495 PF10799 Biofilm formation protein (YliH/bssR) ILQ34_19500 PF04055 Radical SAM superfamily ILQ34_19500 PF00919 Uncharacterized protein family UPF0004 ILQ34_19500 PF18693 TRAM domain ILQ34_19515 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_19515 PF17156 Gammaproteobacterial periplasmic sensor domain ILQ34_19520 PF17153 Periplasmic sensor domain, extracellular ILQ34_19520 PF00563 EAL domain ILQ34_19525 PF12911 N-terminal TM domain of oligopeptide transport permease C ILQ34_19525 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_19530 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_19535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_19540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ILQ34_19540 PF00005 ABC transporter ILQ34_19550 PF03454 MoeA C-terminal region (domain IV) ILQ34_19550 PF00994 Probable molybdopterin binding domain ILQ34_19550 PF03453 MoeA N-terminal region (domain I and II) ILQ34_19555 PF00899 ThiF family ILQ34_19560 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ34_19565 PF04055 Radical SAM superfamily ILQ34_19580 PF07350 Protein of unknown function (DUF1479) ILQ34_19585 PF12848 ABC transporter ILQ34_19585 PF00005 ABC transporter ILQ34_19590 PF03734 L,D-transpeptidase catalytic domain ILQ34_19590 PF17969 L,D-transpeptidase C-terminal domain ILQ34_19595 PF03600 Citrate transporter ILQ34_19600 PF01325 Iron dependent repressor, N-terminal DNA binding domain ILQ34_19600 PF02742 Iron dependent repressor, metal binding and dimerisation domain ILQ34_19610 PF00884 Sulfatase ILQ34_19615 PF13505 Outer membrane protein beta-barrel domain ILQ34_19625 PF00892 EamA-like transporter family ILQ34_19630 PF00210 Ferritin-like domain ILQ34_19635 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_19640 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_19645 PF00005 ABC transporter ILQ34_19650 PF00924 Mechanosensitive ion channel ILQ34_19655 PF05971 RNA methyltransferase ILQ34_19660 PF07338 Protein of unknown function (DUF1471) ILQ34_19665 PF07715 TonB-dependent Receptor Plug Domain ILQ34_19665 PF00593 TonB dependent receptor ILQ34_19670 PF18331 PKHD-type hydroxylase C-terminal domain ILQ34_19670 PF13640 2OG-Fe(II) oxygenase superfamily ILQ34_19675 PF01258 Prokaryotic dksA/traR C4-type zinc finger ILQ34_19680 PF07338 Protein of unknown function (DUF1471) ILQ34_19685 PF02615 Malate/L-lactate dehydrogenase ILQ34_19690 PF02885 Glycosyl transferase family, helical bundle domain ILQ34_19695 PF00270 DEAD/DEAH box helicase ILQ34_19695 PF06733 DEAD_2 ILQ34_19695 PF13307 Helicase C-terminal domain ILQ34_19705 PF00270 DEAD/DEAH box helicase ILQ34_19705 PF00271 Helicase conserved C-terminal domain ILQ34_19710 PF09209 Tetracyclin repressor-like, C-terminal domain ILQ34_19710 PF00440 Bacterial regulatory proteins, tetR family ILQ34_19715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_19720 PF00005 ABC transporter ILQ34_19735 PF11076 Putative inner membrane protein YbhQ ILQ34_19740 PF03372 Endonuclease/Exonuclease/phosphatase family ILQ34_19745 PF13091 PLD-like domain ILQ34_19750 PF03706 Lysylphosphatidylglycerol synthase TM region ILQ34_19755 PF01027 Inhibitor of apoptosis-promoting Bax1 ILQ34_19760 PF01027 Inhibitor of apoptosis-promoting Bax1 ILQ34_19765 PF02391 MoaE protein ILQ34_19770 PF02597 ThiS family ILQ34_19775 PF01967 MoaC family ILQ34_19780 PF00994 Probable molybdopterin binding domain ILQ34_19785 PF06463 Molybdenum Cofactor Synthesis C ILQ34_19785 PF04055 Radical SAM superfamily ILQ34_19790 PF01933 Uncharacterised protein family UPF0052 ILQ34_19795 PF04851 Type III restriction enzyme, res subunit ILQ34_19795 PF17757 UvrB interaction domain ILQ34_19795 PF00271 Helicase conserved C-terminal domain ILQ34_19795 PF02151 UvrB/uvrC motif ILQ34_19795 PF12344 Ultra-violet resistance protein B ILQ34_19805 PF08241 Methyltransferase domain ILQ34_19810 PF00155 Aminotransferase class I and II ILQ34_19815 PF04055 Radical SAM superfamily ILQ34_19815 PF06968 Biotin and Thiamin Synthesis associated domain ILQ34_19820 PF00202 Aminotransferase class-III ILQ34_19825 PF01161 Phosphatidylethanolamine-binding protein ILQ34_19840 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_19865 PF03335 Phage tail fibre repeat ILQ34_19865 PF08400 Prophage tail fibre N-terminal ILQ34_19865 PF07484 Phage Tail Collar Domain ILQ34_19870 PF06316 Enterobacterial Ail/Lom protein ILQ34_19940 PF00574 Clp protease ILQ34_19975 PF03245 Bacteriophage Rz lysis protein ILQ34_19980 PF00959 Phage lysozyme ILQ34_19985 PF04971 Bacteriophage P21 holin S ILQ34_20025 PF00149 Calcineurin-like phosphoesterase ILQ34_20090 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ILQ34_20090 PF00589 Phage integrase family ILQ34_20095 PF01095 Pectinesterase ILQ34_20100 PF00694 Aconitase C-terminal domain ILQ34_20100 PF00330 Aconitase family (aconitate hydratase) ILQ34_20105 PF00939 Sodium:sulfate symporter transmembrane region ILQ34_20115 PF04303 PrpF protein ILQ34_20120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_20120 PF03466 LysR substrate binding domain ILQ34_20125 PF10282 Lactonase, 7-bladed beta-propeller ILQ34_20135 PF03459 TOBE domain ILQ34_20135 PF00005 ABC transporter ILQ34_20140 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_20150 PF10766 Multidrug efflux pump-associated protein AcrZ ILQ34_20155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_20155 PF03459 TOBE domain ILQ34_20160 PF00005 ABC transporter ILQ34_20165 PF16363 GDP-mannose 4,6 dehydratase ILQ34_20170 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ILQ34_20170 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ILQ34_20175 PF00288 GHMP kinases N terminal domain ILQ34_20175 PF10509 Galactokinase galactose-binding signature ILQ34_20175 PF08544 GHMP kinases C terminal ILQ34_20180 PF01263 Aldose 1-epimerase ILQ34_20185 PF00300 Histidine phosphatase superfamily (branch 1) ILQ34_20190 PF00793 DAHP synthetase I family ILQ34_20195 PF13985 YbgS-like protein ILQ34_20200 PF01545 Cation efflux family ILQ34_20205 PF04973 Nicotinamide mononucleotide transporter ILQ34_20210 PF02445 Quinolinate synthetase A protein ILQ34_20245 PF16331 TolA binding protein trimerisation ILQ34_20245 PF13174 Tetratricopeptide repeat ILQ34_20250 PF00691 OmpA family ILQ34_20255 PF04052 TolB amino-terminal domain ILQ34_20255 PF07676 WD40-like Beta Propeller Repeat ILQ34_20260 PF06519 TolA C-terminal ILQ34_20265 PF02472 Biopolymer transport protein ExbD/TolR ILQ34_20270 PF01618 MotA/TolQ/ExbB proton channel family ILQ34_20275 PF03061 Thioesterase superfamily ILQ34_20280 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ILQ34_20285 PF08173 Membrane bound YbgT-like protein ILQ34_20290 PF02322 Cytochrome bd terminal oxidase subunit II ILQ34_20295 PF01654 Cytochrome bd terminal oxidase subunit I ILQ34_20310 PF02310 B12 binding domain ILQ34_20315 PF13941 MutL protein ILQ34_20320 PF06368 Methylaspartate mutase E chain (MutE) ILQ34_20325 PF05034 Methylaspartate ammonia-lyase N-terminus ILQ34_20325 PF07476 Methylaspartate ammonia-lyase C-terminus ILQ34_20340 PF00375 Sodium:dicarboxylate symporter family ILQ34_20345 PF05683 Fumarase C-terminus ILQ34_20345 PF05681 Fumarate hydratase (Fumerase) ILQ34_20350 PF12557 Cob(I)alamin adenosyltransferase N terminal ILQ34_20350 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ILQ34_20355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_20355 PF03466 LysR substrate binding domain ILQ34_20360 PF02629 CoA binding domain ILQ34_20360 PF00549 CoA-ligase ILQ34_20365 PF08442 ATP-grasp domain ILQ34_20365 PF00549 CoA-ligase ILQ34_20370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILQ34_20370 PF00364 Biotin-requiring enzyme ILQ34_20370 PF02817 e3 binding domain ILQ34_20375 PF02779 Transketolase, pyrimidine binding domain ILQ34_20375 PF16078 2-oxoglutarate dehydrogenase N-terminus ILQ34_20375 PF00676 Dehydrogenase E1 component ILQ34_20375 PF16870 2-oxoglutarate dehydrogenase C-terminal ILQ34_20380 PF13085 2Fe-2S iron-sulfur cluster binding domain ILQ34_20385 PF02910 Fumarate reductase flavoprotein C-term ILQ34_20385 PF00890 FAD binding domain ILQ34_20390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILQ34_20395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ILQ34_20405 PF00285 Citrate synthase, C-terminal domain ILQ34_20410 PF00419 Fimbrial protein ILQ34_20415 PF13953 PapC C-terminal domain ILQ34_20415 PF13954 PapC N-terminal domain ILQ34_20415 PF00577 Outer membrane usher protein ILQ34_20420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_20420 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_20425 PF00419 Fimbrial protein ILQ34_20430 PF05145 Transition state regulatory protein AbrB ILQ34_20435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ILQ34_20435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ILQ34_20435 PF06827 Zinc finger found in FPG and IleRS ILQ34_20440 PF03746 LamB/YcsF family ILQ34_20445 PF02626 Carboxyltransferase domain, subdomain A and B ILQ34_20450 PF02682 Carboxyltransferase domain, subdomain C and D ILQ34_20455 PF01784 NIF3 (NGG1p interacting factor 3) ILQ34_20460 PF00854 POT family ILQ34_20465 PF00875 DNA photolyase ILQ34_20465 PF03441 FAD binding domain of DNA photolyase ILQ34_20470 PF08349 Protein of unknown function (DUF1722) ILQ34_20480 PF15631 NTF2 fold immunity protein ILQ34_20490 PF03527 RHS protein ILQ34_20490 PF15606 Bacterial toxin 34 ILQ34_20490 PF05593 RHS Repeat ILQ34_20495 PF10725 Protein of unknown function (DUF2517) ILQ34_20500 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ILQ34_20505 PF03814 Potassium-transporting ATPase A subunit ILQ34_20515 PF02669 K+-transporting ATPase, c chain ILQ34_20520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_20520 PF02702 Osmosensitive K+ channel His kinase sensor domain ILQ34_20520 PF13492 GAF domain ILQ34_20520 PF13493 Domain of unknown function (DUF4118) ILQ34_20520 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_20525 PF00072 Response regulator receiver domain ILQ34_20525 PF00486 Transcriptional regulatory protein, C terminal ILQ34_20535 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ34_20535 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ34_20535 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ34_20540 PF13520 Amino acid permease ILQ34_20545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ILQ34_20545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ILQ34_20545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ILQ34_20545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ILQ34_20550 PF17206 SeqA protein N-terminal domain ILQ34_20550 PF03925 SeqA protein C-terminal domain ILQ34_20555 PF12697 Alpha/beta hydrolase family ILQ34_20560 PF01402 Ribbon-helix-helix protein, copG family ILQ34_20565 PF00258 Flavodoxin ILQ34_20575 PF01475 Ferric uptake regulator family ILQ34_20580 PF13982 YbfN-like lipoprotein ILQ34_20590 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILQ34_20590 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ILQ34_20595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ILQ34_20595 PF02378 Phosphotransferase system, EIIC ILQ34_20595 PF00367 phosphotransferase system, EIIB ILQ34_20600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ILQ34_20605 PF01979 Amidohydrolase family ILQ34_20610 PF01047 MarR family ILQ34_20610 PF00480 ROK family ILQ34_20615 PF13344 Haloacid dehalogenase-like hydrolase ILQ34_20620 PF00733 Asparagine synthase ILQ34_20620 PF13537 Glutamine amidotransferase domain ILQ34_20660 PF01494 FAD binding domain ILQ34_20665 PF00919 Uncharacterized protein family UPF0004 ILQ34_20665 PF01938 TRAM domain ILQ34_20665 PF04055 Radical SAM superfamily ILQ34_20670 PF02562 PhoH-like protein ILQ34_20675 PF02130 Uncharacterized protein family UPF0054 ILQ34_20680 PF03471 Transporter associated domain ILQ34_20680 PF00571 CBS domain ILQ34_20685 PF00795 Carbon-nitrogen hydrolase ILQ34_20690 PF00497 Bacterial extracellular solute-binding proteins, family 3 ILQ34_20695 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_20700 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_20705 PF00005 ABC transporter ILQ34_20710 PF01156 Inosine-uridine preferring nucleoside hydrolase ILQ34_20715 PF00012 Hsp70 protein ILQ34_20725 PF06889 Protein of unknown function (DUF1266) ILQ34_20730 PF08238 Sel1 repeat ILQ34_20740 PF06889 Protein of unknown function (DUF1266) ILQ34_20750 PF07295 Zinc-ribbon containing domain ILQ34_20755 PF13603 Leucyl-tRNA synthetase, Domain 2 ILQ34_20755 PF00133 tRNA synthetases class I (I, L, M and V) ILQ34_20755 PF08264 Anticodon-binding domain of tRNA ILQ34_20760 PF04390 Lipopolysaccharide-assembly ILQ34_20765 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ILQ34_20765 PF06144 DNA polymerase III, delta subunit ILQ34_20770 PF01467 Cytidylyltransferase-like ILQ34_20775 PF00300 Histidine phosphatase superfamily (branch 1) ILQ34_20785 PF02590 Predicted SPOUT methyltransferase ILQ34_20790 PF00905 Penicillin binding protein transpeptidase domain ILQ34_20790 PF03717 Penicillin-binding Protein dimerisation domain ILQ34_20795 PF01098 Cell cycle protein ILQ34_20800 PF05036 Sporulation related domain ILQ34_20800 PF03330 Lytic transglycolase ILQ34_20805 PF07943 Penicillin-binding protein 5, C-terminal domain ILQ34_20805 PF00768 D-alanyl-D-alanine carboxypeptidase ILQ34_20810 PF04359 Protein of unknown function (DUF493) ILQ34_20815 PF03099 Biotin/lipoate A/B protein ligase family ILQ34_20820 PF03466 LysR substrate binding domain ILQ34_20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_20825 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ILQ34_20825 PF04055 Radical SAM superfamily ILQ34_20830 PF02416 mttA/Hcf106 family ILQ34_20835 PF00795 Carbon-nitrogen hydrolase ILQ34_20840 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ILQ34_20845 PF00313 'Cold-shock' DNA-binding domain ILQ34_20850 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ILQ34_20855 PF03606 C4-dicarboxylate anaerobic carrier ILQ34_20860 PF12431 Transcriptional regulator ILQ34_20860 PF00072 Response regulator receiver domain ILQ34_20865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_20865 PF17203 Single cache domain 3 ILQ34_20865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ILQ34_20865 PF00989 PAS fold ILQ34_20870 PF08218 Citrate lyase ligase C-terminal domain ILQ34_20875 PF06857 Malonate decarboxylase delta subunit (MdcD) ILQ34_20880 PF03328 HpcH/HpaI aldolase/citrate lyase family ILQ34_20885 PF04223 Citrate lyase, alpha subunit (CitF) ILQ34_20890 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ILQ34_20895 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ILQ34_20900 PF00939 Sodium:sulfate symporter transmembrane region ILQ34_20905 PF00445 Ribonuclease T2 family ILQ34_20910 PF01272 Transcription elongation factor, GreA/GreB, C-term ILQ34_20910 PF14760 Rnk N-terminus ILQ34_20915 PF13823 Alcohol dehydrogenase GroES-associated ILQ34_20915 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_20915 PF00107 Zinc-binding dehydrogenase ILQ34_20920 PF00582 Universal stress protein family ILQ34_20925 PF13192 Thioredoxin domain ILQ34_20925 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_20930 PF00578 AhpC/TSA family ILQ34_20930 PF10417 C-terminal domain of 1-Cys peroxiredoxin ILQ34_20935 PF13098 Thioredoxin-like domain ILQ34_20940 PF03466 LysR substrate binding domain ILQ34_20940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_20945 PF01507 Phosphoadenosine phosphosulfate reductase family ILQ34_20945 PF11922 Domain of unknown function (DUF3440) ILQ34_20950 PF02195 ParB-like nuclease domain ILQ34_20955 PF00155 Aminotransferase class I and II ILQ34_20960 PF00465 Iron-containing alcohol dehydrogenase ILQ34_20965 PF04328 Selenoprotein, putative ILQ34_20970 PF02554 Carbon starvation protein CstA ILQ34_20970 PF13722 5TM C-terminal transporter carbon starvation CstA ILQ34_20975 PF03061 Thioesterase superfamily ILQ34_20985 PF00857 Isochorismatase family ILQ34_20985 PF00550 Phosphopantetheine attachment site ILQ34_20990 PF13193 AMP-binding enzyme C-terminal domain ILQ34_20990 PF00501 AMP-binding enzyme ILQ34_20995 PF00425 chorismate binding enzyme ILQ34_21000 PF01497 Periplasmic binding protein ILQ34_21005 PF05977 Transmembrane secretion effector ILQ34_21010 PF01032 FecCD transport family ILQ34_21015 PF01032 FecCD transport family ILQ34_21020 PF00005 ABC transporter ILQ34_21025 PF02706 Chain length determinant protein ILQ34_21030 PF00668 Condensation domain ILQ34_21030 PF00501 AMP-binding enzyme ILQ34_21030 PF00975 Thioesterase domain ILQ34_21030 PF00550 Phosphopantetheine attachment site ILQ34_21035 PF03621 MbtH-like protein ILQ34_21040 PF00756 Putative esterase ILQ34_21040 PF11806 Domain of unknown function (DUF3327) ILQ34_21045 PF00593 TonB dependent receptor ILQ34_21045 PF07715 TonB-dependent Receptor Plug Domain ILQ34_21050 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ILQ34_21050 PF01648 4'-phosphopantetheinyl transferase superfamily ILQ34_21055 PF01848 Hok/gef family ILQ34_21060 PF01848 Hok/gef family ILQ34_21065 PF04107 Glutamate-cysteine ligase family 2(GCS2) ILQ34_21070 PF06643 Protein of unknown function (DUF1158) ILQ34_21075 PF04237 YjbR ILQ34_21080 PF00881 Nitroreductase family ILQ34_21085 PF00924 Mechanosensitive ion channel ILQ34_21090 PF00324 Amino acid permease ILQ34_21095 PF00873 AcrB/AcrD/AcrF family ILQ34_21100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_21100 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_21105 PF11604 Copper binding periplasmic protein CusF ILQ34_21110 PF02321 Outer membrane efflux protein ILQ34_21115 PF00486 Transcriptional regulatory protein, C terminal ILQ34_21115 PF00072 Response regulator receiver domain ILQ34_21120 PF00672 HAMP domain ILQ34_21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_21120 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_21125 PF04717 Type VI secretion system, phage-baseplate injector ILQ34_21135 PF05593 RHS Repeat ILQ34_21135 PF05488 PAAR motif ILQ34_21145 PF05593 RHS Repeat ILQ34_21145 PF05488 PAAR motif ILQ34_21155 PF13808 DDE_Tnp_1-associated ILQ34_21155 PF01609 Transposase DDE domain ILQ34_21160 PF13632 Glycosyl transferase family group 2 ILQ34_21160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILQ34_21165 PF13283 Bacteriophage N adsorption protein A C-term ILQ34_21170 PF14488 Domain of unknown function (DUF4434) ILQ34_21175 PF12833 Helix-turn-helix domain ILQ34_21185 PF00196 Bacterial regulatory proteins, luxR family ILQ34_21185 PF00072 Response regulator receiver domain ILQ34_21190 PF00419 Fimbrial protein ILQ34_21195 PF00419 Fimbrial protein ILQ34_21200 PF13953 PapC C-terminal domain ILQ34_21200 PF00577 Outer membrane usher protein ILQ34_21200 PF13954 PapC N-terminal domain ILQ34_21205 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_21205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_21210 PF00419 Fimbrial protein ILQ34_21215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ILQ34_21215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ILQ34_21225 PF04307 LexA-binding, inner membrane-associated putative hydrolase ILQ34_21230 PF01406 tRNA synthetases class I (C) catalytic domain ILQ34_21230 PF09190 DALR domain ILQ34_21235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ILQ34_21240 PF00149 Calcineurin-like phosphoesterase ILQ34_21245 PF00731 AIR carboxylase ILQ34_21250 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ILQ34_21250 PF02222 ATP-grasp domain ILQ34_21255 PF00696 Amino acid kinase family ILQ34_21260 PF11392 Protein of unknown function (DUF2877) ILQ34_21265 PF06545 Protein of unknown function (DUF1116) ILQ34_21270 PF00549 CoA-ligase ILQ34_21270 PF02629 CoA binding domain ILQ34_21275 PF02615 Malate/L-lactate dehydrogenase ILQ34_21280 PF01546 Peptidase family M20/M25/M40 ILQ34_21285 PF05899 Protein of unknown function (DUF861) ILQ34_21285 PF07883 Cupin domain ILQ34_21290 PF02595 Glycerate kinase family ILQ34_21295 PF00860 Permease family ILQ34_21305 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILQ34_21310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILQ34_21310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ34_21315 PF01261 Xylose isomerase-like TIM barrel ILQ34_21320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_21320 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ34_21320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ34_21325 PF09339 IclR helix-turn-helix domain ILQ34_21325 PF01614 Bacterial transcriptional regulator ILQ34_21330 PF04115 Ureidoglycolate lyase ILQ34_21335 PF03466 LysR substrate binding domain ILQ34_21335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_21355 PF14220 Domain of unknown function (DUF4329) ILQ34_21355 PF03527 RHS protein ILQ34_21355 PF05593 RHS Repeat ILQ34_21365 PF00005 ABC transporter ILQ34_21370 PF13472 GDSL-like Lipase/Acylhydrolase family ILQ34_21375 PF00106 short chain dehydrogenase ILQ34_21380 PF00085 Thioredoxin ILQ34_21385 PF03649 Uncharacterised protein family (UPF0014) ILQ34_21390 PF00005 ABC transporter ILQ34_21395 PF01145 SPFH domain / Band 7 family ILQ34_21395 PF16200 C-terminal region of band_7 ILQ34_21400 PF01957 NfeD-like C-terminal, partner-binding ILQ34_21420 PF13411 MerR HTH family regulatory protein ILQ34_21425 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_21430 PF00005 ABC transporter ILQ34_21430 PF00664 ABC transporter transmembrane region ILQ34_21430 PF03412 Peptidase C39 family ILQ34_21455 PF13520 Amino acid permease ILQ34_21460 PF04960 Glutaminase ILQ34_21465 PF00403 Heavy-metal-associated domain ILQ34_21470 PF01381 Helix-turn-helix ILQ34_21475 PF01963 TraB family ILQ34_21480 PF04073 Aminoacyl-tRNA editing domain ILQ34_21485 PF02872 5'-nucleotidase, C-terminal domain ILQ34_21485 PF00149 Calcineurin-like phosphoesterase ILQ34_21490 PF07690 Major Facilitator Superfamily ILQ34_21495 PF02254 TrkA-N domain ILQ34_21495 PF00999 Sodium/hydrogen exchanger family ILQ34_21500 PF00294 pfkB family carbohydrate kinase ILQ34_21505 PF07859 alpha/beta hydrolase fold ILQ34_21510 PF00762 Ferrochelatase ILQ34_21515 PF05191 Adenylate kinase, active site lid ILQ34_21520 PF00183 Hsp90 protein ILQ34_21520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_21525 PF13662 Toprim domain ILQ34_21525 PF02132 RecR protein ILQ34_21530 PF02575 YbaB/EbfC DNA-binding family ILQ34_21535 PF12170 DNA polymerase III tau subunit V interacting with alpha ILQ34_21535 PF12169 DNA polymerase III subunits gamma and tau domain III ILQ34_21535 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ILQ34_21540 PF00156 Phosphoribosyl transferase domain ILQ34_21545 PF04304 Protein of unknown function (DUF454) ILQ34_21550 PF07445 Primosomal replication protein priC ILQ34_21555 PF10689 Protein of unknown function (DUF2496) ILQ34_21560 PF12794 Mechanosensitive ion channel inner membrane domain 1 ILQ34_21560 PF12795 Mechanosensitive ion channel porin domain ILQ34_21560 PF00924 Mechanosensitive ion channel ILQ34_21565 PF00440 Bacterial regulatory proteins, tetR family ILQ34_21565 PF08361 MAATS-type transcriptional repressor, C-terminal region ILQ34_21570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_21570 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_21575 PF00873 AcrB/AcrD/AcrF family ILQ34_21580 PF10757 Biofilm formation regulator YbaJ ILQ34_21585 PF05321 Haemolysin expression modulating protein ILQ34_21590 PF14602 Hexapeptide repeat of succinyl-transferase ILQ34_21590 PF12464 Maltose acetyltransferase ILQ34_21595 PF10777 Inner membrane protein YlaC ILQ34_21600 PF12792 CSS motif domain associated with EAL ILQ34_21600 PF00563 EAL domain ILQ34_21605 PF07237 Protein of unknown function (DUF1428) ILQ34_21615 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ILQ34_21620 PF09619 Type III secretion system lipoprotein chaperone (YscW) ILQ34_21630 PF00909 Ammonium Transporter Family ILQ34_21635 PF00543 Nitrogen regulatory protein P-II ILQ34_21640 PF00664 ABC transporter transmembrane region ILQ34_21640 PF00005 ABC transporter ILQ34_21645 PF00005 ABC transporter ILQ34_21645 PF00664 ABC transporter transmembrane region ILQ34_21650 PF01037 Lrp/AsnC ligand binding domain ILQ34_21650 PF13404 AsnC-type helix-turn-helix domain ILQ34_21660 PF12793 Sugar transport-related sRNA regulator N-term ILQ34_21660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_21665 PF06508 Queuosine biosynthesis protein QueC ILQ34_21680 PF13145 PPIC-type PPIASE domain ILQ34_21685 PF00216 Bacterial DNA-binding protein ILQ34_21690 PF02190 ATP-dependent protease La (LON) substrate-binding domain ILQ34_21690 PF05362 Lon protease (S16) C-terminal proteolytic domain ILQ34_21690 PF00004 ATPase family associated with various cellular activities (AAA) ILQ34_21695 PF07724 AAA domain (Cdc48 subfamily) ILQ34_21695 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ34_21695 PF06689 ClpX C4-type zinc finger ILQ34_21700 PF00574 Clp protease ILQ34_21705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ34_21705 PF05698 Bacterial trigger factor protein (TF) C-terminus ILQ34_21705 PF05697 Bacterial trigger factor protein (TF) ILQ34_21710 PF01722 BolA-like protein ILQ34_21715 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ILQ34_21715 PF03923 Uncharacterized lipoprotein ILQ34_21720 PF07690 Major Facilitator Superfamily ILQ34_21725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ILQ34_21725 PF06481 COX Aromatic Rich Motif ILQ34_21730 PF00115 Cytochrome C and Quinol oxidase polypeptide I ILQ34_21735 PF00510 Cytochrome c oxidase subunit III ILQ34_21740 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ILQ34_21745 PF01040 UbiA prenyltransferase family ILQ34_21750 PF07690 Major Facilitator Superfamily ILQ34_21755 PF04461 Protein of unknown function (DUF520) ILQ34_21760 PF08546 Ketopantoate reductase PanE/ApbA C terminal ILQ34_21760 PF02558 Ketopantoate reductase PanE/ApbA ILQ34_21765 PF01965 DJ-1/PfpI family ILQ34_21770 PF02568 Thiamine biosynthesis protein (ThiI) ILQ34_21770 PF02926 THUMP domain ILQ34_21775 PF02609 Exonuclease VII small subunit ILQ34_21780 PF00348 Polyprenyl synthetase ILQ34_21785 PF02780 Transketolase, C-terminal domain ILQ34_21785 PF02779 Transketolase, pyrimidine binding domain ILQ34_21785 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ILQ34_21790 PF00248 Aldo/keto reductase family ILQ34_21800 PF04608 Phosphatidylglycerophosphatase A ILQ34_21805 PF00586 AIR synthase related protein, N-terminal domain ILQ34_21805 PF02769 AIR synthase related protein, C-terminal domain ILQ34_21810 PF01029 NusB family ILQ34_21815 PF00885 6,7-dimethyl-8-ribityllumazine synthase ILQ34_21820 PF01872 RibD C-terminal domain ILQ34_21820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ILQ34_21825 PF03477 ATP cone domain ILQ34_21830 PF11622 Protein of unknown function (DUF3251) ILQ34_21835 PF03502 Nucleoside-specific channel-forming protein, Tsx ILQ34_21840 PF01844 HNH endonuclease ILQ34_21850 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ILQ34_21855 PF07549 SecD/SecF GG Motif ILQ34_21855 PF02355 Protein export membrane protein ILQ34_21860 PF13721 SecD export protein N-terminal TM region ILQ34_21860 PF02355 Protein export membrane protein ILQ34_21860 PF07549 SecD/SecF GG Motif ILQ34_21865 PF02699 Preprotein translocase subunit ILQ34_21870 PF01702 Queuine tRNA-ribosyltransferase ILQ34_21875 PF02547 Queuosine biosynthesis protein ILQ34_21880 PF04336 Acyl carrier protein phosphodiesterase ILQ34_21890 PF02903 Alpha amylase, N-terminal ig-like domain ILQ34_21890 PF00128 Alpha amylase, catalytic domain ILQ34_21895 PF00324 Amino acid permease ILQ34_21900 PF05525 Branched-chain amino acid transport protein ILQ34_21905 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_21905 PF00989 PAS fold ILQ34_21905 PF11808 Phosphate regulon sensor protein PhoR ILQ34_21905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_21910 PF00486 Transcriptional regulatory protein, C terminal ILQ34_21910 PF00072 Response regulator receiver domain ILQ34_21915 PF00149 Calcineurin-like phosphoesterase ILQ34_21915 PF12320 Type 5 capsule protein repressor C-terminal domain ILQ34_21920 PF13476 AAA domain ILQ34_21925 PF07690 Major Facilitator Superfamily ILQ34_21930 PF00480 ROK family ILQ34_21935 PF04381 Putative exonuclease, RdgC ILQ34_21945 PF10971 Protein of unknown function (DUF2773) ILQ34_21950 PF06865 Pyrimidine/purine nucleoside phosphorylase ILQ34_21955 PF07302 AroM protein ILQ34_21960 PF16362 YaiA protein ILQ34_21965 PF01202 Shikimate kinase ILQ34_21970 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ILQ34_21975 PF03807 NADP oxidoreductase coenzyme F420-dependent ILQ34_21975 PF14748 Pyrroline-5-carboxylate reductase dimerisation ILQ34_21980 PF05230 MASE2 domain ILQ34_21980 PF00990 Diguanylate cyclase, GGDEF domain ILQ34_21985 PF07769 psiF repeat ILQ34_21990 PF00245 Alkaline phosphatase ILQ34_21995 PF10796 Sigma-S stabilisation anti-adaptor protein ILQ34_22005 PF01820 D-ala D-ala ligase N-terminus ILQ34_22005 PF07478 D-ala D-ala ligase C-terminus ILQ34_22010 PF10953 Protein of unknown function (DUF2754) ILQ34_22015 PF10954 Protein of unknown function (DUF2755) ILQ34_22020 PF07759 Protein of unknown function (DUF1615) ILQ34_22025 PF05992 SbmA/BacA-like family ILQ34_22030 PF00144 Beta-lactamase ILQ34_22035 PF15977 Winged helix-turn-helix DNA binding ILQ34_22040 PF03797 Autotransporter beta-domain ILQ34_22040 PF03212 Pertactin ILQ34_22045 PF00490 Delta-aminolevulinic acid dehydratase ILQ34_22050 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ILQ34_22055 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_22060 PF00005 ABC transporter ILQ34_22065 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ILQ34_22070 PF00196 Bacterial regulatory proteins, luxR family ILQ34_22070 PF00072 Response regulator receiver domain ILQ34_22075 PF05231 MASE1 ILQ34_22075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_22075 PF07730 Histidine kinase ILQ34_22080 PF07690 Major Facilitator Superfamily ILQ34_22090 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_22095 PF00005 ABC transporter ILQ34_22095 PF08402 TOBE domain ILQ34_22100 PF02583 Metal-sensitive transcriptional repressor ILQ34_22105 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_22105 PF00107 Zinc-binding dehydrogenase ILQ34_22110 PF00756 Putative esterase ILQ34_22115 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ILQ34_22120 PF07690 Major Facilitator Superfamily ILQ34_22125 PF00682 HMGL-like ILQ34_22125 PF07836 DmpG-like communication domain ILQ34_22130 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ34_22130 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ILQ34_22135 PF01557 Fumarylacetoacetate (FAA) hydrolase family ILQ34_22140 PF12697 Alpha/beta hydrolase family ILQ34_22145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ILQ34_22150 PF01494 FAD binding domain ILQ34_22155 PF09339 IclR helix-turn-helix domain ILQ34_22155 PF01614 Bacterial transcriptional regulator ILQ34_22160 PF12706 Beta-lactamase superfamily domain ILQ34_22170 PF00356 Bacterial regulatory proteins, lacI family ILQ34_22175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ILQ34_22175 PF00703 Glycosyl hydrolases family 2 ILQ34_22175 PF16353 Domain of unknown function(DUF4981) ILQ34_22175 PF02929 Beta galactosidase small chain ILQ34_22175 PF02837 Glycosyl hydrolases family 2, sugar binding domain ILQ34_22180 PF01306 LacY proton/sugar symporter ILQ34_22185 PF12464 Maltose acetyltransferase ILQ34_22185 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_22190 PF07690 Major Facilitator Superfamily ILQ34_22195 PF02560 Cyanate lyase C-terminal domain ILQ34_22200 PF00484 Carbonic anhydrase ILQ34_22205 PF03466 LysR substrate binding domain ILQ34_22205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_22210 PF07969 Amidohydrolase family ILQ34_22215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ILQ34_22220 PF00501 AMP-binding enzyme ILQ34_22220 PF13193 AMP-binding enzyme C-terminal domain ILQ34_22220 PF16177 Acetyl-coenzyme A synthetase N-terminus ILQ34_22225 PF03972 MmgE/PrpD family ILQ34_22230 PF00285 Citrate synthase, C-terminal domain ILQ34_22240 PF00158 Sigma-54 interaction domain ILQ34_22240 PF06506 Propionate catabolism activator ILQ34_22240 PF02954 Bacterial regulatory protein, Fis family ILQ34_22245 PF07338 Protein of unknown function (DUF1471) ILQ34_22250 PF01810 LysE type translocator ILQ34_22265 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_22265 PF00107 Zinc-binding dehydrogenase ILQ34_22270 PF02653 Branched-chain amino acid transport system / permease component ILQ34_22275 PF02653 Branched-chain amino acid transport system / permease component ILQ34_22285 PF13407 Periplasmic binding protein domain ILQ34_22295 PF07969 Amidohydrolase family ILQ34_22300 PF00696 Amino acid kinase family ILQ34_22310 PF06545 Protein of unknown function (DUF1116) ILQ34_22315 PF02629 CoA binding domain ILQ34_22315 PF00549 CoA-ligase ILQ34_22320 PF11392 Protein of unknown function (DUF2877) ILQ34_22325 PF12796 Ankyrin repeats (3 copies) ILQ34_22340 PF00563 EAL domain ILQ34_22340 PF00196 Bacterial regulatory proteins, luxR family ILQ34_22345 PF03797 Autotransporter beta-domain ILQ34_22350 PF02028 BCCT, betaine/carnitine/choline family transporter ILQ34_22355 PF00440 Bacterial regulatory proteins, tetR family ILQ34_22355 PF13977 BetI-type transcriptional repressor, C-terminal ILQ34_22360 PF00171 Aldehyde dehydrogenase family ILQ34_22365 PF00732 GMC oxidoreductase ILQ34_22365 PF05199 GMC oxidoreductase ILQ34_22415 PF02589 LUD domain ILQ34_22420 PF02589 LUD domain ILQ34_22420 PF11870 Domain of unknown function (DUF3390) ILQ34_22420 PF13183 4Fe-4S dicluster domain ILQ34_22425 PF02754 Cysteine-rich domain ILQ34_22430 PF12852 Cupin ILQ34_22430 PF12833 Helix-turn-helix domain ILQ34_22435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ34_22435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_22440 PF07338 Protein of unknown function (DUF1471) ILQ34_22445 PF04224 Protein of unknown function, DUF417 ILQ34_22450 PF00248 Aldo/keto reductase family ILQ34_22455 PF12833 Helix-turn-helix domain ILQ34_22460 PF11924 Inverse autotransporter, beta-domain ILQ34_22475 PF03466 LysR substrate binding domain ILQ34_22475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_22480 PF12146 Serine aminopeptidase, S33 ILQ34_22485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ILQ34_22495 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_22495 PF13007 Transposase C of IS166 homeodomain ILQ34_22495 PF13817 IS66 C-terminal element ILQ34_22495 PF03050 Transposase IS66 family ILQ34_22500 PF05717 IS66 Orf2 like protein ILQ34_22510 PF01197 Ribosomal protein L31 ILQ34_22515 PF00444 Ribosomal protein L36 ILQ34_22525 PF00196 Bacterial regulatory proteins, luxR family ILQ34_22530 PF16449 Fimbrillin MatB ILQ34_22535 PF18649 EcpB C-terminal domain ILQ34_22540 PF15976 CS1-pili formation C-terminal ILQ34_22540 PF16967 E-set like domain ILQ34_22550 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_22555 PF03692 Putative zinc- or iron-chelating domain ILQ34_22560 PF07274 Protein of unknown function (DUF1440) ILQ34_22565 PF00111 2Fe-2S iron-sulfur cluster binding domain ILQ34_22565 PF01799 [2Fe-2S] binding domain ILQ34_22565 PF10518 TAT (twin-arginine translocation) pathway signal sequence ILQ34_22570 PF03450 CO dehydrogenase flavoprotein C-terminal domain ILQ34_22570 PF00941 FAD binding domain in molybdopterin dehydrogenase ILQ34_22575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ILQ34_22575 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ILQ34_22580 PF13478 XdhC Rossmann domain ILQ34_22580 PF02625 XdhC and CoxI family ILQ34_22590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ILQ34_22595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_22595 PF03466 LysR substrate binding domain ILQ34_22605 PF00106 short chain dehydrogenase ILQ34_22610 PF03466 LysR substrate binding domain ILQ34_22625 PF17345 Family of unknown function (DUF5375) ILQ34_22690 PF13356 Arm DNA-binding domain ILQ34_22690 PF00589 Phage integrase family ILQ34_22690 PF14659 Phage integrase, N-terminal SAM-like domain ILQ34_22700 PF12833 Helix-turn-helix domain ILQ34_22710 PF00239 Resolvase, N terminal domain ILQ34_22710 PF02796 Helix-turn-helix domain of resolvase ILQ34_22720 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_22725 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ILQ34_22730 PF07484 Phage Tail Collar Domain ILQ34_22755 PF01381 Helix-turn-helix ILQ34_22755 PF00717 Peptidase S24-like ILQ34_22785 PF00171 Aldehyde dehydrogenase family ILQ34_22790 PF01472 PUA domain ILQ34_22790 PF00696 Amino acid kinase family ILQ34_22795 PF00267 Gram-negative porin ILQ34_22800 PF07417 Sigma factor-binding transcriptional regulator Crl ILQ34_22805 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ILQ34_22810 PF00156 Phosphoribosyl transferase domain ILQ34_22815 PF07687 Peptidase dimerisation domain ILQ34_22815 PF01546 Peptidase family M20/M25/M40 ILQ34_22830 PF13673 Acetyltransferase (GNAT) domain ILQ34_22835 PF13957 Toxin YafO, type II toxin-antitoxin system ILQ34_22845 PF11798 IMS family HHH motif ILQ34_22845 PF11799 impB/mucB/samB family C-terminal domain ILQ34_22845 PF00817 impB/mucB/samB family ILQ34_22850 PF00691 OmpA family ILQ34_22850 PF13677 Membrane MotB of proton-channel complex MotA/MotB ILQ34_22855 PF00771 FHIPEP family ILQ34_22865 PF00877 NlpC/P60 family ILQ34_22870 PF04221 RelB antitoxin ILQ34_22875 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ ILQ34_22880 PF03734 L,D-transpeptidase catalytic domain ILQ34_22885 PF13230 Glutamine amidotransferases class-II ILQ34_22890 PF13580 SIS domain ILQ34_22895 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ34_22895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILQ34_22895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ34_22895 PF09317 Domain of unknown function (DUF1974) ILQ34_22905 PF00795 Carbon-nitrogen hydrolase ILQ34_22910 PF01609 Transposase DDE domain ILQ34_22910 PF13808 DDE_Tnp_1-associated ILQ34_22930 PF01609 Transposase DDE domain ILQ34_22930 PF13808 DDE_Tnp_1-associated ILQ34_22950 PF03527 RHS protein ILQ34_22950 PF14220 Domain of unknown function (DUF4329) ILQ34_22950 PF05593 RHS Repeat ILQ34_22955 PF04717 Type VI secretion system, phage-baseplate injector ILQ34_22960 PF05638 Type VI secretion system effector, Hcp ILQ34_22975 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ILQ34_22985 PF05947 Type VI secretion system, TssF ILQ34_23005 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ILQ34_23015 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ34_23015 PF07724 AAA domain (Cdc48 subfamily) ILQ34_23015 PF17871 AAA lid domain ILQ34_23015 PF00004 ATPase family associated with various cellular activities (AAA) ILQ34_23030 PF14331 ImcF-related N-terminal domain ILQ34_23030 PF06744 Type VI secretion protein IcmF C-terminal ILQ34_23030 PF06761 Intracellular multiplication and human macrophage-killing ILQ34_23070 PF00929 Exonuclease ILQ34_23075 PF00075 RNase H ILQ34_23080 PF08241 Methyltransferase domain ILQ34_23085 PF16123 Hydroxyacylglutathione hydrolase C-terminus ILQ34_23085 PF00753 Metallo-beta-lactamase superfamily ILQ34_23090 PF01464 Transglycosylase SLT domain ILQ34_23090 PF01476 LysM domain ILQ34_23095 PF08241 Methyltransferase domain ILQ34_23100 PF03372 Endonuclease/Exonuclease/phosphatase family ILQ34_23105 PF03466 LysR substrate binding domain ILQ34_23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_23110 PF00248 Aldo/keto reductase family ILQ34_23150 PF00005 ABC transporter ILQ34_23150 PF09383 NIL domain ILQ34_23155 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_23160 PF03180 NLPA lipoprotein ILQ34_23165 PF16358 RcsF lipoprotein ILQ34_23170 PF18389 TrmO C-terminal domain ILQ34_23170 PF01980 tRNA-methyltransferase O ILQ34_23175 PF04073 Aminoacyl-tRNA editing domain ILQ34_23175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ILQ34_23175 PF03129 Anticodon binding domain ILQ34_23180 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ILQ34_23185 PF04170 NlpE N-terminal domain ILQ34_23185 PF17185 NlpE C-terminal OB domain ILQ34_23190 PF00472 RF-1 domain ILQ34_23195 PF07152 YaeQ protein ILQ34_23200 PF06786 Uncharacterised protein family (UPF0253) ILQ34_23205 PF07073 Modulator of Rho-dependent transcription termination (ROF) ILQ34_23210 PF09179 TilS substrate binding domain ILQ34_23210 PF01171 PP-loop family ILQ34_23210 PF11734 TilS substrate C-terminal domain ILQ34_23215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ILQ34_23220 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ34_23220 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ34_23220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ34_23225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ILQ34_23230 PF02811 PHP domain ILQ34_23230 PF14579 Helix-hairpin-helix motif ILQ34_23230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ILQ34_23230 PF07733 Bacterial DNA polymerase III alpha NTPase domain ILQ34_23230 PF01336 OB-fold nucleic acid binding domain ILQ34_23235 PF01351 Ribonuclease HII ILQ34_23240 PF02684 Lipid-A-disaccharide synthetase ILQ34_23245 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ILQ34_23245 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_23250 PF07977 FabA-like domain ILQ34_23255 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_23255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ILQ34_23260 PF03938 Outer membrane protein (OmpH-like) ILQ34_23265 PF01103 Surface antigen ILQ34_23265 PF07244 Surface antigen variable number repeat ILQ34_23270 PF17820 PDZ domain ILQ34_23270 PF02163 Peptidase family M50 ILQ34_23280 PF01255 Putative undecaprenyl diphosphate synthase ILQ34_23285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ILQ34_23285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ILQ34_23285 PF13288 DXP reductoisomerase C-terminal domain ILQ34_23290 PF01765 Ribosome recycling factor ILQ34_23295 PF00696 Amino acid kinase family ILQ34_23300 PF00889 Elongation factor TS ILQ34_23305 PF00318 Ribosomal protein S2 ILQ34_23310 PF00557 Metallopeptidase family M24 ILQ34_23315 PF01842 ACT domain ILQ34_23315 PF01909 Nucleotidyltransferase domain ILQ34_23315 PF01966 HD domain ILQ34_23315 PF08335 GlnD PII-uridylyltransferase ILQ34_23320 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_23320 PF14602 Hexapeptide repeat of succinyl-transferase ILQ34_23320 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ILQ34_23325 PF11944 Protein of unknown function (DUF3461) ILQ34_23330 PF17853 GGDEF-like domain ILQ34_23330 PF13556 PucR C-terminal helix-turn-helix domain ILQ34_23330 PF05651 Putative sugar diacid recognition ILQ34_23335 PF00595 PDZ domain ILQ34_23340 PF01966 HD domain ILQ34_23345 PF01048 Phosphorylase superfamily ILQ34_23350 PF01497 Periplasmic binding protein ILQ34_23355 PF03458 UPF0126 domain ILQ34_23360 PF01521 Iron-sulphur cluster biosynthesis ILQ34_23370 PF00654 Voltage gated chloride channel ILQ34_23375 PF00202 Aminotransferase class-III ILQ34_23380 PF01032 FecCD transport family ILQ34_23385 PF01497 Periplasmic binding protein ILQ34_23390 PF00005 ABC transporter ILQ34_23395 PF07715 TonB-dependent Receptor Plug Domain ILQ34_23395 PF00593 TonB dependent receptor ILQ34_23400 PF14814 Bifunctional transglycosylase second domain ILQ34_23400 PF00905 Penicillin binding protein transpeptidase domain ILQ34_23400 PF00912 Transglycosylase ILQ34_23400 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ILQ34_23405 PF04408 Helicase associated domain (HA2) ILQ34_23405 PF00271 Helicase conserved C-terminal domain ILQ34_23405 PF08482 ATP-dependent helicase C-terminal ILQ34_23405 PF00270 DEAD/DEAH box helicase ILQ34_23410 PF02834 LigT like Phosphoesterase ILQ34_23415 PF03749 Sugar fermentation stimulation protein RE domain ILQ34_23415 PF17746 SfsA N-terminal OB domain ILQ34_23420 PF01258 Prokaryotic dksA/traR C4-type zinc finger ILQ34_23425 PF00749 tRNA synthetases class I (E and Q), catalytic domain ILQ34_23430 PF12627 Probable RNA and SrmB- binding site of polymerase A ILQ34_23430 PF12626 Polymerase A arginine-rich C-terminus ILQ34_23430 PF01743 Poly A polymerase head domain ILQ34_23435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ILQ34_23445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_23445 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_23450 PF00577 Outer membrane usher protein ILQ34_23450 PF13954 PapC N-terminal domain ILQ34_23450 PF13953 PapC C-terminal domain ILQ34_23455 PF00419 Fimbrial protein ILQ34_23460 PF00419 Fimbrial protein ILQ34_23475 PF02548 Ketopantoate hydroxymethyltransferase ILQ34_23480 PF02569 Pantoate-beta-alanine ligase ILQ34_23485 PF04754 Putative transposase, YhgA-like ILQ34_23490 PF02261 Aspartate decarboxylase ILQ34_23495 PF01522 Polysaccharide deacetylase ILQ34_23500 PF03610 PTS system fructose IIA component ILQ34_23505 PF01061 ABC-2 type transporter ILQ34_23510 PF00005 ABC transporter ILQ34_23515 PF00484 Carbonic anhydrase ILQ34_23520 PF00156 Phosphoribosyl transferase domain ILQ34_23525 PF01011 PQQ enzyme repeat ILQ34_23530 PF07731 Multicopper oxidase ILQ34_23530 PF07732 Multicopper oxidase ILQ34_23530 PF00394 Multicopper oxidase ILQ34_23535 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ILQ34_23540 PF17284 Spermidine synthase tetramerisation domain ILQ34_23545 PF02675 S-adenosylmethionine decarboxylase ILQ34_23550 PF06062 Uncharacterised protein family (UPF0231) ILQ34_23555 PF00330 Aconitase family (aconitate hydratase) ILQ34_23555 PF06434 Aconitate hydratase 2 N-terminus ILQ34_23555 PF11791 Aconitate B N-terminal domain ILQ34_23560 PF11737 Protein of unknown function (DUF3300) ILQ34_23565 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_23565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ34_23570 PF02817 e3 binding domain ILQ34_23570 PF00364 Biotin-requiring enzyme ILQ34_23570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ILQ34_23575 PF00456 Transketolase, thiamine diphosphate binding domain ILQ34_23575 PF17831 Pyruvate dehydrogenase E1 component middle domain ILQ34_23580 PF00392 Bacterial regulatory proteins, gntR family ILQ34_23580 PF07729 FCD domain ILQ34_23585 PF00324 Amino acid permease ILQ34_23590 PF17113 Regulatory signalling modulator protein AmpE ILQ34_23595 PF01510 N-acetylmuramoyl-L-alanine amidase ILQ34_23600 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ILQ34_23600 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ILQ34_23605 PF07963 Prokaryotic N-terminal methylation motif ILQ34_23610 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ILQ34_23610 PF00437 Type II/IV secretion system protein ILQ34_23615 PF00482 Type II secretion system (T2SS), protein F ILQ34_23620 PF00478 IMP dehydrogenase / GMP reductase domain ILQ34_23630 PF01121 Dephospho-CoA kinase ILQ34_23635 PF07072 Cell division protein ILQ34_23640 PF03884 DNA gyrase inhibitor YacG ILQ34_23645 PF00293 NUDIX domain ILQ34_23650 PF07517 SecA DEAD-like domain ILQ34_23650 PF07516 SecA Wing and Scaffold domain ILQ34_23650 PF02810 SEC-C motif ILQ34_23650 PF01043 SecA preprotein cross-linking domain ILQ34_23655 PF06558 Secretion monitor precursor protein (SecM) ILQ34_23660 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ILQ34_23665 PF12327 FtsZ family, C-terminal domain ILQ34_23665 PF00091 Tubulin/FtsZ family, GTPase domain ILQ34_23670 PF02491 SHS2 domain inserted in FTSA ILQ34_23675 PF03799 Cell division protein FtsQ ILQ34_23675 PF08478 POTRA domain, FtsQ-type ILQ34_23680 PF07478 D-ala D-ala ligase C-terminus ILQ34_23680 PF01820 D-ala D-ala ligase N-terminus ILQ34_23685 PF01225 Mur ligase family, catalytic domain ILQ34_23685 PF08245 Mur ligase middle domain ILQ34_23685 PF02875 Mur ligase family, glutamate ligase domain ILQ34_23690 PF04101 Glycosyltransferase family 28 C-terminal domain ILQ34_23690 PF03033 Glycosyltransferase family 28 N-terminal domain ILQ34_23695 PF01098 Cell cycle protein ILQ34_23700 PF08245 Mur ligase middle domain ILQ34_23700 PF02875 Mur ligase family, glutamate ligase domain ILQ34_23705 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ILQ34_23705 PF00953 Glycosyl transferase family 4 ILQ34_23710 PF01225 Mur ligase family, catalytic domain ILQ34_23710 PF02875 Mur ligase family, glutamate ligase domain ILQ34_23710 PF08245 Mur ligase middle domain ILQ34_23715 PF02875 Mur ligase family, glutamate ligase domain ILQ34_23715 PF08245 Mur ligase middle domain ILQ34_23715 PF01225 Mur ligase family, catalytic domain ILQ34_23720 PF00905 Penicillin binding protein transpeptidase domain ILQ34_23720 PF03717 Penicillin-binding Protein dimerisation domain ILQ34_23725 PF04999 Cell division protein FtsL ILQ34_23730 PF01795 MraW methylase family ILQ34_23735 PF02381 MraZ protein, putative antitoxin-like ILQ34_23740 PF00356 Bacterial regulatory proteins, lacI family ILQ34_23740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ILQ34_23750 PF10369 Small subunit of acetolactate synthase ILQ34_23755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_23755 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ34_23755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ34_23760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_23760 PF03466 LysR substrate binding domain ILQ34_23765 PF08054 Leucine operon leader peptide ILQ34_23770 PF00682 HMGL-like ILQ34_23770 PF08502 LeuA allosteric (dimerisation) domain ILQ34_23775 PF00180 Isocitrate/isopropylmalate dehydrogenase ILQ34_23780 PF00330 Aconitase family (aconitate hydratase) ILQ34_23785 PF00694 Aconitase C-terminal domain ILQ34_23795 PF12793 Sugar transport-related sRNA regulator N-term ILQ34_23795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ILQ34_23810 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_23815 PF00005 ABC transporter ILQ34_23820 PF09335 SNARE associated Golgi protein ILQ34_23825 PF02311 AraC-like ligand binding domain ILQ34_23825 PF12833 Helix-turn-helix domain ILQ34_23830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ34_23835 PF11762 L-arabinose isomerase C-terminal domain ILQ34_23835 PF02610 L-arabinose isomerase ILQ34_23840 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ34_23850 PF00271 Helicase conserved C-terminal domain ILQ34_23850 PF12137 RNA polymerase recycling family C-terminal ILQ34_23850 PF00176 SNF2 family N-terminal domain ILQ34_23850 PF18339 RapA N-terminal Tudor like domain 1 ILQ34_23850 PF18337 RapA N-terminal Tudor like domain ILQ34_23855 PF00849 RNA pseudouridylate synthase ILQ34_23870 PF05099 Tellurite resistance protein TerB ILQ34_23870 PF00226 DnaJ domain ILQ34_23875 PF04453 LPS transport system D ILQ34_23875 PF03968 OstA-like protein ILQ34_23880 PF09312 SurA N-terminal domain ILQ34_23880 PF00639 PPIC-type PPIASE domain ILQ34_23885 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ILQ34_23890 PF00398 Ribosomal RNA adenine dimethylase ILQ34_23895 PF04379 ApaG domain ILQ34_23900 PF00149 Calcineurin-like phosphoesterase ILQ34_23915 PF00186 Dihydrofolate reductase ILQ34_23920 PF02254 TrkA-N domain ILQ34_23920 PF00999 Sodium/hydrogen exchanger family ILQ34_23925 PF02525 Flavodoxin-like fold ILQ34_23930 PF00083 Sugar (and other) transporter ILQ34_23940 PF01494 FAD binding domain ILQ34_23945 PF01012 Electron transfer flavoprotein domain ILQ34_23945 PF00766 Electron transfer flavoprotein FAD-binding domain ILQ34_23950 PF01012 Electron transfer flavoprotein domain ILQ34_23955 PF02028 BCCT, betaine/carnitine/choline family transporter ILQ34_23960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ34_23960 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ34_23960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ILQ34_23965 PF02515 CoA-transferase family III ILQ34_23970 PF00501 AMP-binding enzyme ILQ34_23970 PF13193 AMP-binding enzyme C-terminal domain ILQ34_23975 PF00378 Enoyl-CoA hydratase/isomerase ILQ34_23980 PF00132 Bacterial transferase hexapeptide (six repeats) ILQ34_23985 PF07180 CaiF/GrlA transcriptional regulator ILQ34_23990 PF02142 MGS-like domain ILQ34_23990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ILQ34_23990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ILQ34_23995 PF00117 Glutamine amidotransferase class-I ILQ34_23995 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ILQ34_24000 PF05173 Dihydrodipicolinate reductase, C-terminus ILQ34_24000 PF01113 Dihydrodipicolinate reductase, N-terminus ILQ34_24005 PF01156 Inosine-uridine preferring nucleoside hydrolase ILQ34_24010 PF02401 LytB protein ILQ34_24015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ34_24020 PF01252 Signal peptidase (SPase) II ILQ34_24025 PF06827 Zinc finger found in FPG and IleRS ILQ34_24025 PF08264 Anticodon-binding domain of tRNA ILQ34_24025 PF00133 tRNA synthetases class I (I, L, M and V) ILQ34_24030 PF01687 Riboflavin kinase ILQ34_24030 PF06574 FAD synthetase ILQ34_24035 PF10837 Protein of unknown function (DUF2575) ILQ34_24040 PF01649 Ribosomal protein S20 ILQ34_24055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_24055 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_24060 PF13953 PapC C-terminal domain ILQ34_24060 PF13954 PapC N-terminal domain ILQ34_24060 PF00577 Outer membrane usher protein ILQ34_24070 PF03466 LysR substrate binding domain ILQ34_24070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_24075 PF06965 Na+/H+ antiporter 1 ILQ34_24080 PF01848 Hok/gef family ILQ34_24085 PF00226 DnaJ domain ILQ34_24085 PF00684 DnaJ central domain ILQ34_24085 PF01556 DnaJ C terminal domain ILQ34_24090 PF00012 Hsp70 protein ILQ34_24095 PF10807 Protein of unknown function (DUF2541) ILQ34_24100 PF03981 Ubiquinol-cytochrome C chaperone ILQ34_24100 PF13099 Domain of unknown function (DUF3944) ILQ34_24105 PF01184 GPR1/FUN34/yaaH family ILQ34_24110 PF00994 Probable molybdopterin binding domain ILQ34_24115 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ34_24120 PF01235 Sodium:alanine symporter family ILQ34_24125 PF03883 Peroxide stress protein YaaA ILQ34_24130 PF10697 Protein of unknown function (DUF2502) ILQ34_24135 PF14821 Threonine synthase N terminus ILQ34_24135 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_24140 PF00288 GHMP kinases N terminal domain ILQ34_24140 PF08544 GHMP kinases C terminal ILQ34_24145 PF00696 Amino acid kinase family ILQ34_24145 PF01842 ACT domain ILQ34_24145 PF13840 ACT domain ILQ34_24145 PF00742 Homoserine dehydrogenase ILQ34_24145 PF03447 Homoserine dehydrogenase, NAD binding domain ILQ34_24155 PF00588 SpoU rRNA Methylase family ILQ34_24165 PF00486 Transcriptional regulatory protein, C terminal ILQ34_24165 PF00072 Response regulator receiver domain ILQ34_24170 PF06123 Inner membrane protein CreD ILQ34_24175 PF00672 HAMP domain ILQ34_24175 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_24175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_24180 PF00072 Response regulator receiver domain ILQ34_24180 PF00486 Transcriptional regulatory protein, C terminal ILQ34_24185 PF05981 CreA protein ILQ34_24190 PF12833 Helix-turn-helix domain ILQ34_24190 PF06445 GyrI-like small molecule binding domain ILQ34_24195 PF00300 Histidine phosphatase superfamily (branch 1) ILQ34_24200 PF01931 Protein of unknown function DUF84 ILQ34_24205 PF01371 Trp repressor protein ILQ34_24210 PF01464 Transglycosylase SLT domain ILQ34_24210 PF14718 Soluble lytic murein transglycosylase L domain ILQ34_24215 PF12848 ABC transporter ILQ34_24215 PF00005 ABC transporter ILQ34_24225 PF13521 AAA domain ILQ34_24225 PF01381 Helix-turn-helix ILQ34_24230 PF18073 Rubredoxin metal binding domain ILQ34_24235 PF18429 Domain of unknown function (DUF5609) ILQ34_24245 PF10437 Bacterial lipoate protein ligase C-terminus ILQ34_24245 PF03099 Biotin/lipoate A/B protein ligase family ILQ34_24255 PF01048 Phosphorylase superfamily ILQ34_24260 PF01676 Metalloenzyme superfamily ILQ34_24265 PF02885 Glycosyl transferase family, helical bundle domain ILQ34_24265 PF00591 Glycosyl transferase family, a/b domain ILQ34_24265 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ILQ34_24270 PF01791 DeoC/LacD family aldolase ILQ34_24280 PF04055 Radical SAM superfamily ILQ34_24285 PF01026 TatD related DNase ILQ34_24290 PF01734 Patatin-like phospholipase ILQ34_24295 PF07043 Protein of unknown function (DUF1328) ILQ34_24300 PF04972 BON domain ILQ34_24305 PF16658 Class II release factor RF3, C-terminal domain ILQ34_24305 PF03144 Elongation factor Tu domain 2 ILQ34_24305 PF00009 Elongation factor Tu GTP binding domain ILQ34_24310 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_24315 PF00583 Acetyltransferase (GNAT) family ILQ34_24320 PF03603 DNA polymerase III psi subunit ILQ34_24325 PF08468 Methyltransferase small domain N-terminal ILQ34_24325 PF05175 Methyltransferase small domain ILQ34_24335 PF07256 Protein of unknown function (DUF1435) ILQ34_24340 PF06276 Ferric iron reductase FhuF-like transporter ILQ34_24340 PF11575 FhuF 2Fe-2S C-terminal domain ILQ34_24345 PF00196 Bacterial regulatory proteins, luxR family ILQ34_24350 PF00196 Bacterial regulatory proteins, luxR family ILQ34_24355 PF06738 Putative threonine/serine exporter ILQ34_24360 PF12821 Threonine/Serine exporter, ThrE ILQ34_24365 PF17948 DnaT DNA-binding domain ILQ34_24370 PF01695 IstB-like ATP binding protein ILQ34_24375 PF10696 Protein of unknown function (DUF2501) ILQ34_24380 PF00884 Sulfatase ILQ34_24385 PF00107 Zinc-binding dehydrogenase ILQ34_24385 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_24390 PF00392 Bacterial regulatory proteins, gntR family ILQ34_24390 PF07729 FCD domain ILQ34_24395 PF07690 Major Facilitator Superfamily ILQ34_24400 PF02203 Tar ligand binding domain homologue ILQ34_24400 PF00672 HAMP domain ILQ34_24400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ILQ34_24410 PF13722 5TM C-terminal transporter carbon starvation CstA ILQ34_24410 PF02554 Carbon starvation protein CstA ILQ34_24415 PF04328 Selenoprotein, putative ILQ34_24420 PF07683 Cobalamin synthesis protein cobW C-terminal domain ILQ34_24420 PF02492 CobW/HypB/UreG, nucleotide-binding domain ILQ34_24435 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ILQ34_24435 PF08463 EcoEI R protein C-terminal ILQ34_24435 PF04851 Type III restriction enzyme, res subunit ILQ34_24435 PF00271 Helicase conserved C-terminal domain ILQ34_24440 PF12161 HsdM N-terminal domain ILQ34_24440 PF02384 N-6 DNA Methylase ILQ34_24445 PF01420 Type I restriction modification DNA specificity domain ILQ34_24450 PF08845 Toxin SymE, type I toxin-antitoxin system ILQ34_24465 PF06568 Domain of unknown function (DUF1127) ILQ34_24470 PF00155 Aminotransferase class I and II ILQ34_24470 PF00392 Bacterial regulatory proteins, gntR family ILQ34_24475 PF04754 Putative transposase, YhgA-like ILQ34_24485 PF07690 Major Facilitator Superfamily ILQ34_24490 PF04286 Protein of unknown function (DUF445) ILQ34_24495 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component ILQ34_24500 PF01869 BadF/BadG/BcrA/BcrD ATPase family ILQ34_24505 PF11823 Protein of unknown function (DUF3343) ILQ34_24515 PF06977 SdiA-regulated ILQ34_24520 PF06779 Uncharacterised MFS-type transporter YbfB ILQ34_24535 PF07670 Nucleoside recognition ILQ34_24540 PF07670 Nucleoside recognition ILQ34_24545 PF01979 Amidohydrolase family ILQ34_24555 PF04965 Gene 25-like lysozyme ILQ34_24565 PF10887 Protein of unknown function (DUF2686) ILQ34_24570 PF07729 FCD domain ILQ34_24570 PF00392 Bacterial regulatory proteins, gntR family ILQ34_24575 PF01232 Mannitol dehydrogenase Rossmann domain ILQ34_24575 PF08125 Mannitol dehydrogenase C-terminal domain ILQ34_24580 PF03786 D-mannonate dehydratase (UxuA) ILQ34_24585 PF02447 GntP family permease ILQ34_24590 PF00419 Fimbrial protein ILQ34_24590 PF09160 FimH, mannose binding ILQ34_24600 PF00419 Fimbrial protein ILQ34_24615 PF05717 IS66 Orf2 like protein ILQ34_24620 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_24620 PF13817 IS66 C-terminal element ILQ34_24620 PF13007 Transposase C of IS166 homeodomain ILQ34_24620 PF03050 Transposase IS66 family ILQ34_24625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ILQ34_24625 PF02753 Pili assembly chaperone PapD, C-terminal domain ILQ34_24630 PF00419 Fimbrial protein ILQ34_24635 PF00419 Fimbrial protein ILQ34_24640 PF00589 Phage integrase family ILQ34_24645 PF00589 Phage integrase family ILQ34_24650 PF06178 Oligogalacturonate-specific porin protein (KdgM) ILQ34_24660 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ILQ34_24670 PF13361 UvrD-like helicase C-terminal domain ILQ34_24670 PF00580 UvrD/REP helicase N-terminal domain ILQ34_24675 PF00271 Helicase conserved C-terminal domain ILQ34_24675 PF09369 Domain of unknown function (DUF1998) ILQ34_24675 PF00270 DEAD/DEAH box helicase ILQ34_24685 PF00271 Helicase conserved C-terminal domain ILQ34_24685 PF12137 RNA polymerase recycling family C-terminal ILQ34_24685 PF00176 SNF2 family N-terminal domain ILQ34_24685 PF18339 RapA N-terminal Tudor like domain 1 ILQ34_24685 PF18337 RapA N-terminal Tudor like domain ILQ34_24735 PF01381 Helix-turn-helix ILQ34_24750 PF02796 Helix-turn-helix domain of resolvase ILQ34_24750 PF00239 Resolvase, N terminal domain ILQ34_24780 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_24780 PF00107 Zinc-binding dehydrogenase ILQ34_24785 PF05872 Bacterial protein of unknown function (DUF853) ILQ34_24790 PF03739 Lipopolysaccharide export system permease LptF/LptG ILQ34_24795 PF03739 Lipopolysaccharide export system permease LptF/LptG ILQ34_24800 PF00883 Cytosol aminopeptidase family, catalytic domain ILQ34_24800 PF02789 Cytosol aminopeptidase family, N-terminal domain ILQ34_24805 PF04364 DNA polymerase III chi subunit, HolC ILQ34_24810 PF08264 Anticodon-binding domain of tRNA ILQ34_24810 PF00133 tRNA synthetases class I (I, L, M and V) ILQ34_24810 PF10458 Valyl tRNA synthetase tRNA binding arm ILQ34_24815 PF05987 Bacterial protein of unknown function (DUF898) ILQ34_24820 PF00583 Acetyltransferase (GNAT) family ILQ34_24825 PF06877 Regulator of ribonuclease activity B ILQ34_24830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILQ34_24830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILQ34_24840 PF04074 YhcH/YjgK/YiaL ILQ34_24845 PF00440 Bacterial regulatory proteins, tetR family ILQ34_24855 PF01042 Endoribonuclease L-PSP ILQ34_24860 PF08052 PyrBI operon leader peptide ILQ34_24865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ILQ34_24865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ILQ34_24870 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ILQ34_24870 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ILQ34_24875 PF01042 Endoribonuclease L-PSP ILQ34_24880 PF00689 Cation transporting ATPase, C-terminus ILQ34_24880 PF00690 Cation transporter/ATPase, N-terminus ILQ34_24885 PF17059 MgtA leader peptide ILQ34_24890 PF00356 Bacterial regulatory proteins, lacI family ILQ34_24895 PF00367 phosphotransferase system, EIIB ILQ34_24895 PF02378 Phosphotransferase system, EIIC ILQ34_24900 PF00128 Alpha amylase, catalytic domain ILQ34_24900 PF11941 Domain of unknown function (DUF3459) ILQ34_24905 PF03477 ATP cone domain ILQ34_24905 PF13597 Anaerobic ribonucleoside-triphosphate reductase ILQ34_24915 PF07361 Cytochrome b562 ILQ34_24920 PF01523 Putative modulator of DNA gyrase ILQ34_24925 PF04751 Protein of unknown function (DUF615) ILQ34_24930 PF01225 Mur ligase family, catalytic domain ILQ34_24930 PF08245 Mur ligase middle domain ILQ34_24930 PF02875 Mur ligase family, glutamate ligase domain ILQ34_24935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ILQ34_24940 PF02653 Branched-chain amino acid transport system / permease component ILQ34_24945 PF02653 Branched-chain amino acid transport system / permease component ILQ34_24950 PF00005 ABC transporter ILQ34_24955 PF13407 Periplasmic binding protein domain ILQ34_24960 PF00719 Inorganic pyrophosphatase ILQ34_24965 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ILQ34_24970 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ILQ34_24975 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ILQ34_24980 PF04357 TamB, inner membrane protein subunit of TAM complex ILQ34_24985 PF07244 Surface antigen variable number repeat ILQ34_24985 PF17243 POTRA domain TamA domain 1 ILQ34_24985 PF01103 Surface antigen ILQ34_24990 PF01625 Peptide methionine sulfoxide reductase ILQ34_24995 PF03471 Transporter associated domain ILQ34_24995 PF01595 Cyclin M transmembrane N-terminal domain ILQ34_24995 PF00571 CBS domain ILQ34_25000 PF06526 Protein of unknown function (DUF1107) ILQ34_25005 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ILQ34_25015 PF00459 Inositol monophosphatase family ILQ34_25020 PF02872 5'-nucleotidase, C-terminal domain ILQ34_25020 PF00149 Calcineurin-like phosphoesterase ILQ34_25025 PF01638 HxlR-like helix-turn-helix ILQ34_25030 PF05368 NmrA-like family ILQ34_25035 PF00892 EamA-like transporter family ILQ34_25040 PF04405 Domain of Unknown function (DUF542) ILQ34_25040 PF01814 Hemerythrin HHE cation binding domain ILQ34_25045 PF00324 Amino acid permease ILQ34_25050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ILQ34_25050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ILQ34_25055 PF08525 Opacity-associated protein A N-terminal motif ILQ34_25055 PF04225 Opacity-associated protein A LysM-like domain ILQ34_25065 PF12323 Helix-turn-helix domain ILQ34_25065 PF01385 Probable transposase ILQ34_25065 PF07282 Putative transposase DNA-binding domain ILQ34_25070 PF01797 Transposase IS200 like ILQ34_25080 PF10887 Protein of unknown function (DUF2686) ILQ34_25085 PF01281 Ribosomal protein L9, N-terminal domain ILQ34_25085 PF03948 Ribosomal protein L9, C-terminal domain ILQ34_25090 PF01084 Ribosomal protein S18 ILQ34_25095 PF00436 Single-strand binding protein family ILQ34_25100 PF01250 Ribosomal protein S6 ILQ34_25105 PF07338 Protein of unknown function (DUF1471) ILQ34_25110 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ34_25115 PF01261 Xylose isomerase-like TIM barrel ILQ34_25120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ILQ34_25125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_25130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_25135 PF03611 PTS system sugar-specific permease component ILQ34_25145 PF00455 DeoR C terminal sensor domain ILQ34_25145 PF08220 DeoR-like helix-turn-helix domain ILQ34_25150 PF00326 Prolyl oligopeptidase family ILQ34_25155 PF07338 Protein of unknown function (DUF1471) ILQ34_25160 PF07338 Protein of unknown function (DUF1471) ILQ34_25165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ILQ34_25165 PF02770 Acyl-CoA dehydrogenase, middle domain ILQ34_25165 PF18158 Adaptive response protein AidB N-terminal domain ILQ34_25170 PF03738 Glutathionylspermidine synthase preATP-grasp ILQ34_25175 PF06693 Protein of unknown function (DUF1190) ILQ34_25180 PF03994 Domain of Unknown Function (DUF350) ILQ34_25185 PF10679 Protein of unknown function (DUF2491) ILQ34_25190 PF04012 PspA/IM30 family ILQ34_25195 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) ILQ34_25200 PF00588 SpoU rRNA Methylase family ILQ34_25200 PF08032 RNA 2'-O ribose methyltransferase substrate binding ILQ34_25205 PF08206 Ribonuclease B OB domain ILQ34_25205 PF17876 Cold shock domain ILQ34_25205 PF00575 S1 RNA binding domain ILQ34_25205 PF00773 RNB domain ILQ34_25205 PF08461 Ribonuclease R winged-helix domain ILQ34_25210 PF02082 Transcriptional regulator ILQ34_25215 PF00709 Adenylosuccinate synthetase ILQ34_25220 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ILQ34_25225 PF01145 SPFH domain / Band 7 family ILQ34_25230 PF01145 SPFH domain / Band 7 family ILQ34_25230 PF12221 Bacterial membrane protein N terminal ILQ34_25235 PF13167 GTP-binding GTPase N-terminal ILQ34_25235 PF01926 50S ribosome-binding GTPase ILQ34_25235 PF16360 GTP-binding GTPase Middle Region ILQ34_25240 PF17209 Hfq protein ILQ34_25250 PF01119 DNA mismatch repair protein, C-terminal domain ILQ34_25250 PF08676 MutL C terminal dimerisation domain ILQ34_25255 PF01520 N-acetylmuramoyl-L-alanine amidase ILQ34_25260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ILQ34_25265 PF01256 Carbohydrate kinase ILQ34_25265 PF03853 YjeF-related protein N-terminus ILQ34_25270 PF08331 Domain of unknown function (DUF1730) ILQ34_25295 PF00929 Exonuclease ILQ34_25300 PF03193 RsgA GTPase ILQ34_25305 PF02666 Phosphatidylserine decarboxylase ILQ34_25310 PF00924 Mechanosensitive ion channel ILQ34_25310 PF12794 Mechanosensitive ion channel inner membrane domain 1 ILQ34_25310 PF12795 Mechanosensitive ion channel porin domain ILQ34_25315 PF13520 Amino acid permease ILQ34_25320 PF00152 tRNA synthetases class II (D, K and N) ILQ34_25325 PF02910 Fumarate reductase flavoprotein C-term ILQ34_25325 PF00890 FAD binding domain ILQ34_25330 PF13085 2Fe-2S iron-sulfur cluster binding domain ILQ34_25330 PF13183 4Fe-4S dicluster domain ILQ34_25335 PF02300 Fumarate reductase subunit C ILQ34_25340 PF02313 Fumarate reductase subunit D ILQ34_25345 PF00144 Beta-lactamase ILQ34_25350 PF08212 Lipocalin-like domain ILQ34_25355 PF00893 Small Multidrug Resistance protein ILQ34_25360 PF08085 Entericidin EcnA/B family ILQ34_25365 PF08085 Entericidin EcnA/B family ILQ34_25370 PF09285 Elongation factor P, C-terminal ILQ34_25370 PF01132 Elongation factor P (EF-P) OB domain ILQ34_25370 PF08207 Elongation factor P (EF-P) KOW-like domain ILQ34_25375 PF04055 Radical SAM superfamily ILQ34_25380 PF15922 YjeJ-like ILQ34_25385 PF13698 Domain of unknown function (DUF4156) ILQ34_25390 PF00118 TCP-1/cpn60 chaperonin family ILQ34_25395 PF00166 Chaperonin 10 Kd subunit ILQ34_25400 PF13520 Amino acid permease ILQ34_25405 PF04186 FxsA cytoplasmic membrane protein ILQ34_25410 PF10415 Fumarase C C-terminus ILQ34_25410 PF00206 Lyase ILQ34_25415 PF03605 Anaerobic c4-dicarboxylate membrane transporter ILQ34_25420 PF03091 CutA1 divalent ion tolerance protein ILQ34_25425 PF02683 Cytochrome C biogenesis protein transmembrane region ILQ34_25425 PF11412 Disulphide bond corrector protein DsbC ILQ34_25440 PF00486 Transcriptional regulatory protein, C terminal ILQ34_25440 PF18500 CadC C-terminal domain 1 ILQ34_25445 PF13520 Amino acid permease ILQ34_25450 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ34_25450 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ34_25450 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ34_25455 PF00854 POT family ILQ34_25460 PF00152 tRNA synthetases class II (D, K and N) ILQ34_25460 PF01336 OB-fold nucleic acid binding domain ILQ34_25465 PF10753 Toxin GhoT_OrtT ILQ34_25470 PF11080 Endoribonuclease GhoS ILQ34_25475 PF14542 GCN5-related N-acetyl-transferase ILQ34_25480 PF06902 Divergent 4Fe-4S mono-cluster ILQ34_25485 PF00989 PAS fold ILQ34_25485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ILQ34_25485 PF17203 Single cache domain 3 ILQ34_25485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_25490 PF00072 Response regulator receiver domain ILQ34_25495 PF03605 Anaerobic c4-dicarboxylate membrane transporter ILQ34_25500 PF05683 Fumarase C-terminus ILQ34_25500 PF05681 Fumarate hydratase (Fumerase) ILQ34_25505 PF09997 Predicted membrane protein (DUF2238) ILQ34_25515 PF02056 Family 4 glycosyl hydrolase ILQ34_25515 PF11975 Family 4 glycosyl hydrolase C-terminal domain ILQ34_25520 PF12833 Helix-turn-helix domain ILQ34_25525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ILQ34_25525 PF01276 Orn/Lys/Arg decarboxylase, major domain ILQ34_25525 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ILQ34_25530 PF12833 Helix-turn-helix domain ILQ34_25535 PF13520 Amino acid permease ILQ34_25540 PF00884 Sulfatase ILQ34_25540 PF08019 Phosphoethanolamine transferase EptA/EptB ILQ34_25545 PF00072 Response regulator receiver domain ILQ34_25545 PF00486 Transcriptional regulatory protein, C terminal ILQ34_25550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_25550 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_25560 PF00083 Sugar (and other) transporter ILQ34_25560 PF08946 Osmosensory transporter coiled coil ILQ34_25565 PF13990 YjcZ-like protein ILQ34_25570 PF00350 Dynamin family ILQ34_25575 PF08274 PhnA Zinc-Ribbon ILQ34_25575 PF03831 PhnA domain ILQ34_25580 PF06983 3-demethylubiquinone-9 3-methyltransferase ILQ34_25585 PF00005 ABC transporter ILQ34_25595 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_25600 PF07702 UTRA domain ILQ34_25600 PF00392 Bacterial regulatory proteins, gntR family ILQ34_25605 PF06754 Phosphonate metabolism protein PhnG ILQ34_25610 PF05845 Bacterial phosphonate metabolism protein (PhnH) ILQ34_25615 PF05861 Bacterial phosphonate metabolism protein (PhnI) ILQ34_25620 PF06007 Phosphonate metabolism protein PhnJ ILQ34_25625 PF00005 ABC transporter ILQ34_25630 PF00005 ABC transporter ILQ34_25635 PF07969 Amidohydrolase family ILQ34_25645 PF00583 Acetyltransferase (GNAT) family ILQ34_25650 PF12706 Beta-lactamase superfamily domain ILQ34_25660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_25660 PF00072 Response regulator receiver domain ILQ34_25660 PF13188 PAS domain ILQ34_25660 PF08448 PAS fold ILQ34_25660 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_25665 PF00005 ABC transporter ILQ34_25670 PF02653 Branched-chain amino acid transport system / permease component ILQ34_25675 PF13407 Periplasmic binding protein domain ILQ34_25685 PF01116 Fructose-bisphosphate aldolase class-II ILQ34_25690 PF00294 pfkB family carbohydrate kinase ILQ34_25695 PF00072 Response regulator receiver domain ILQ34_25695 PF00486 Transcriptional regulatory protein, C terminal ILQ34_25700 PF14863 Alkyl sulfatase dimerisation ILQ34_25700 PF14864 Alkyl sulfatase C-terminal ILQ34_25700 PF00753 Metallo-beta-lactamase superfamily ILQ34_25705 PF17090 Uncharacterised protein family ILQ34_25710 PF00529 HlyD membrane-fusion protein of T1SS ILQ34_25710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ILQ34_25715 PF04632 Fusaric acid resistance protein family ILQ34_25720 PF02321 Outer membrane efflux protein ILQ34_25730 PF08238 Sel1 repeat ILQ34_25735 PF00375 Sodium:dicarboxylate symporter family ILQ34_25745 PF03918 Cytochrome C biogenesis protein ILQ34_25750 PF01578 Cytochrome C assembly protein ILQ34_25750 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ILQ34_25755 PF03916 Polysulphide reductase, NrfD ILQ34_25760 PF00037 4Fe-4S binding domain ILQ34_25760 PF13247 4Fe-4S dicluster domain ILQ34_25765 PF13435 Cytochrome c554 and c-prime ILQ34_25765 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) ILQ34_25770 PF02335 Cytochrome c552 ILQ34_25775 PF16177 Acetyl-coenzyme A synthetase N-terminus ILQ34_25775 PF00501 AMP-binding enzyme ILQ34_25775 PF13193 AMP-binding enzyme C-terminal domain ILQ34_25780 PF04341 Protein of unknown function, DUF485 ILQ34_25785 PF00474 Sodium:solute symporter family ILQ34_25790 PF00805 Pentapeptide repeats (8 copies) ILQ34_25795 PF00999 Sodium/hydrogen exchanger family ILQ34_25800 PF00860 Permease family ILQ34_25805 PF09278 MerR, DNA binding ILQ34_25805 PF00376 MerR family regulatory protein ILQ34_25810 PF12833 Helix-turn-helix domain ILQ34_25815 PF00563 EAL domain ILQ34_25815 PF12792 CSS motif domain associated with EAL ILQ34_25820 PF15940 Family of unknown function ILQ34_25825 PF00436 Single-strand binding protein family ILQ34_25830 PF17760 UvrA interaction domain ILQ34_25830 PF00005 ABC transporter ILQ34_25830 PF17755 UvrA DNA-binding domain ILQ34_25835 PF04237 YjbR ILQ34_25840 PF01894 Uncharacterised protein family UPF0047 ILQ34_25845 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ILQ34_25855 PF00155 Aminotransferase class I and II ILQ34_25860 PF00842 Alanine racemase, C-terminal domain ILQ34_25860 PF01168 Alanine racemase, N-terminal domain ILQ34_25865 PF00772 DnaB-like helicase N terminal domain ILQ34_25865 PF03796 DnaB-like helicase C terminal domain ILQ34_25870 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_25870 PF00107 Zinc-binding dehydrogenase ILQ34_25875 PF09583 Phage shock protein G (Phageshock_PspG) ILQ34_25880 PF01207 Dihydrouridine synthase (Dus) ILQ34_25890 PF06183 DinI-like family ILQ34_25920 PF03335 Phage tail fibre repeat ILQ34_25920 PF08400 Prophage tail fibre N-terminal ILQ34_25920 PF07484 Phage Tail Collar Domain ILQ34_25925 PF06316 Enterobacterial Ail/Lom protein ILQ34_25980 PF01207 Dihydrouridine synthase (Dus) ILQ34_25985 PF10897 Protein of unknown function (DUF2713) ILQ34_25990 PF01475 Ferric uptake regulator family ILQ34_25995 PF05532 CsbD-like ILQ34_26000 PF01554 MatE ILQ34_26005 PF01726 LexA DNA binding domain ILQ34_26005 PF00717 Peptidase S24-like ILQ34_26010 PF01219 Prokaryotic diacylglycerol kinase ILQ34_26015 PF01553 Acyltransferase ILQ34_26020 PF01040 UbiA prenyltransferase family ILQ34_26025 PF04345 Chorismate lyase ILQ34_26035 PF07148 Maltose operon periplasmic protein precursor (MalM) ILQ34_26040 PF02264 LamB porin ILQ34_26045 PF17912 MalK OB fold domain ILQ34_26045 PF00005 ABC transporter ILQ34_26050 PF01547 Bacterial extracellular solute-binding protein ILQ34_26055 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_26055 PF14785 Maltose transport system permease protein MalF P2 domain ILQ34_26060 PF00528 Binding-protein-dependent transport system inner membrane component ILQ34_26065 PF00083 Sugar (and other) transporter ILQ34_26070 PF06146 Phosphate-starvation-inducible E ILQ34_26080 PF17089 Uncharacterised protein family ILQ34_26085 PF06082 Exopolysaccharide biosynthesis protein YbjH ILQ34_26090 PF06251 Capsule biosynthesis GfcC ILQ34_26095 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF ILQ34_26100 PF11106 Exopolysaccharide production protein YjbE ILQ34_26105 PF00342 Phosphoglucose isomerase ILQ34_26110 PF01842 ACT domain ILQ34_26110 PF00696 Amino acid kinase family ILQ34_26115 PF11656 YjbD family (DUF3811) ILQ34_26120 PF01479 S4 domain ILQ34_26120 PF00849 RNA pseudouridylate synthase ILQ34_26125 PF04198 Putative sugar-binding domain ILQ34_26125 PF13936 Helix-turn-helix domain ILQ34_26130 PF00106 short chain dehydrogenase ILQ34_26135 PF03610 PTS system fructose IIA component ILQ34_26140 PF03830 PTS system sorbose subfamily IIB component ILQ34_26145 PF03609 PTS system sorbose-specific iic component ILQ34_26150 PF03613 PTS system mannose/fructose/sorbose family IID component ILQ34_26155 PF08240 Alcohol dehydrogenase GroES-like domain ILQ34_26155 PF00107 Zinc-binding dehydrogenase ILQ34_26160 PF03575 Peptidase family S51 ILQ34_26165 PF02690 Na+/Pi-cotransporter ILQ34_26170 PF00809 Pterin binding enzyme ILQ34_26170 PF02310 B12 binding domain ILQ34_26170 PF02607 B12 binding domain ILQ34_26170 PF02574 Homocysteine S-methyltransferase ILQ34_26170 PF02965 Vitamin B12 dependent methionine synthase, activation domain ILQ34_26175 PF01614 Bacterial transcriptional regulator ILQ34_26175 PF09339 IclR helix-turn-helix domain ILQ34_26180 PF07906 ShET2 enterotoxin, N-terminal region ILQ34_26185 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ILQ34_26190 PF00463 Isocitrate lyase family ILQ34_26195 PF01274 Malate synthase ILQ34_26200 PF04204 Homoserine O-succinyltransferase ILQ34_26205 PF13673 Acetyltransferase (GNAT) domain ILQ34_26230 PF01808 AICARFT/IMPCHase bienzyme ILQ34_26230 PF02142 MGS-like domain ILQ34_26235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ILQ34_26235 PF02844 Phosphoribosylglycinamide synthetase, N domain ILQ34_26235 PF02843 Phosphoribosylglycinamide synthetase, C domain ILQ34_26240 PF00158 Sigma-54 interaction domain ILQ34_26240 PF02954 Bacterial regulatory protein, Fis family ILQ34_26240 PF00072 Response regulator receiver domain ILQ34_26245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_26245 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_26250 PF13801 Heavy-metal resistance ILQ34_26255 PF07356 Protein of unknown function (DUF1481) ILQ34_26260 PF00216 Bacterial DNA-binding protein ILQ34_26265 PF04222 Protein of unknown function (DUF416) ILQ34_26270 PF04493 Endonuclease V ILQ34_26275 PF01208 Uroporphyrinogen decarboxylase (URO-D) ILQ34_26280 PF09297 NADH pyrophosphatase zinc ribbon domain ILQ34_26280 PF00293 NUDIX domain ILQ34_26285 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ILQ34_26290 PF01964 Radical SAM ThiC family ILQ34_26290 PF13667 ThiC-associated domain ILQ34_26295 PF02581 Thiamine monophosphate synthase ILQ34_26300 PF00899 ThiF family ILQ34_26305 PF02597 ThiS family ILQ34_26310 PF05690 Thiazole biosynthesis protein ThiG ILQ34_26315 PF06968 Biotin and Thiamin Synthesis associated domain ILQ34_26315 PF04055 Radical SAM superfamily ILQ34_26325 PF04998 RNA polymerase Rpb1, domain 5 ILQ34_26325 PF04983 RNA polymerase Rpb1, domain 3 ILQ34_26325 PF05000 RNA polymerase Rpb1, domain 4 ILQ34_26325 PF00623 RNA polymerase Rpb1, domain 2 ILQ34_26325 PF04997 RNA polymerase Rpb1, domain 1 ILQ34_26330 PF04561 RNA polymerase Rpb2, domain 2 ILQ34_26330 PF04563 RNA polymerase beta subunit ILQ34_26330 PF10385 RNA polymerase beta subunit external 1 domain ILQ34_26330 PF00562 RNA polymerase Rpb2, domain 6 ILQ34_26330 PF04565 RNA polymerase Rpb2, domain 3 ILQ34_26330 PF04560 RNA polymerase Rpb2, domain 7 ILQ34_26335 PF16320 Ribosomal protein L7/L12 dimerisation domain ILQ34_26335 PF00542 Ribosomal protein L7/L12 C-terminal domain ILQ34_26340 PF00466 Ribosomal protein L10 ILQ34_26345 PF00687 Ribosomal protein L1p/L10e family ILQ34_26350 PF00298 Ribosomal protein L11, RNA binding domain ILQ34_26350 PF03946 Ribosomal protein L11, N-terminal domain ILQ34_26355 PF00467 KOW motif ILQ34_26355 PF02357 Transcription termination factor nusG ILQ34_26360 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ILQ34_26365 PF00009 Elongation factor Tu GTP binding domain ILQ34_26365 PF03144 Elongation factor Tu domain 2 ILQ34_26365 PF03143 Elongation factor Tu C-terminal domain ILQ34_26390 PF00485 Phosphoribulokinase / Uridine kinase family ILQ34_26395 PF08279 HTH domain ILQ34_26395 PF03099 Biotin/lipoate A/B protein ligase family ILQ34_26395 PF02237 Biotin protein ligase C terminal domain ILQ34_26400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ILQ34_26400 PF01565 FAD binding domain ILQ34_26425 PF01177 Asp/Glu/Hydantoin racemase ILQ34_26430 PF07715 TonB-dependent Receptor Plug Domain ILQ34_26430 PF00593 TonB dependent receptor ILQ34_26435 PF05958 tRNA (Uracil-5-)-methyltransferase ILQ34_26440 PF07226 Protein of unknown function (DUF1422) ILQ34_26445 PF00440 Bacterial regulatory proteins, tetR family ILQ34_26450 PF07690 Major Facilitator Superfamily ILQ34_26455 PF01546 Peptidase family M20/M25/M40 ILQ34_26455 PF07687 Peptidase dimerisation domain ILQ34_26460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ILQ34_26460 PF07992 Pyridine nucleotide-disulphide oxidoreductase ILQ34_26465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_26465 PF03466 LysR substrate binding domain ILQ34_26470 PF00206 Lyase ILQ34_26470 PF14698 Argininosuccinate lyase C-terminal ILQ34_26475 PF00696 Amino acid kinase family ILQ34_26480 PF01118 Semialdehyde dehydrogenase, NAD binding domain ILQ34_26480 PF02774 Semialdehyde dehydrogenase, dimerisation domain ILQ34_26485 PF01546 Peptidase family M20/M25/M40 ILQ34_26485 PF07687 Peptidase dimerisation domain ILQ34_26490 PF00311 Phosphoenolpyruvate carboxylase ILQ34_26495 PF00884 Sulfatase ILQ34_26500 PF12833 Helix-turn-helix domain ILQ34_26505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_26510 PF04055 Radical SAM superfamily ILQ34_26515 PF02901 Pyruvate formate lyase-like ILQ34_26515 PF01228 Glycine radical ILQ34_26520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_26530 PF05524 PEP-utilising enzyme, N-terminal ILQ34_26530 PF00391 PEP-utilising enzyme, mobile domain ILQ34_26530 PF02896 PEP-utilising enzyme, TIM barrel domain ILQ34_26530 PF00381 PTS HPr component phosphorylation site ILQ34_26530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_26535 PF00923 Transaldolase/Fructose-6-phosphate aldolase ILQ34_26540 PF00465 Iron-containing alcohol dehydrogenase ILQ34_26545 PF06940 Domain of unknown function (DUF1287) ILQ34_26550 PF00892 EamA-like transporter family ILQ34_26555 PF00141 Peroxidase ILQ34_26560 PF02219 Methylenetetrahydrofolate reductase ILQ34_26565 PF00696 Amino acid kinase family ILQ34_26565 PF00742 Homoserine dehydrogenase ILQ34_26565 PF03447 Homoserine dehydrogenase, NAD binding domain ILQ34_26570 PF01053 Cys/Met metabolism PLP-dependent enzyme ILQ34_26575 PF01340 Met Apo-repressor, MetJ ILQ34_26580 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ILQ34_26595 PF05593 RHS Repeat ILQ34_26595 PF03527 RHS protein ILQ34_26595 PF14220 Domain of unknown function (DUF4329) ILQ34_26600 PF01197 Ribosomal protein L31 ILQ34_26605 PF00270 DEAD/DEAH box helicase ILQ34_26605 PF00271 Helicase conserved C-terminal domain ILQ34_26605 PF17764 3′ DNA-binding domain (3′BD) ILQ34_26605 PF18074 Primosomal protein N C-terminal domain ILQ34_26605 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ILQ34_26610 PF00356 Bacterial regulatory proteins, lacI family ILQ34_26615 PF05036 Sporulation related domain ILQ34_26620 PF00227 Proteasome subunit ILQ34_26625 PF00004 ATPase family associated with various cellular activities (AAA) ILQ34_26625 PF10431 C-terminal, D2-small domain, of ClpB protein ILQ34_26625 PF07724 AAA domain (Cdc48 subfamily) ILQ34_26630 PF01040 UbiA prenyltransferase family ILQ34_26635 PF03737 Aldolase/RraA ILQ34_26650 PF06005 Cell division protein ZapB ILQ34_26655 PF00230 Major intrinsic protein ILQ34_26660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ34_26660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ34_26665 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ILQ34_26670 PF00175 Oxidoreductase NAD-binding domain ILQ34_26670 PF00970 Oxidoreductase FAD-binding domain ILQ34_26675 PF00582 Universal stress protein family ILQ34_26680 PF04175 Protein of unknown function (DUF406) ILQ34_26685 PF05656 Protein of unknown function (DUF805) ILQ34_26690 PF07305 Protein of unknown function (DUF1454) ILQ34_26695 PF00121 Triosephosphate isomerase ILQ34_26700 PF02611 CDP-diacylglycerol pyrophosphatase ILQ34_26710 PF00365 Phosphofructokinase ILQ34_26715 PF16916 Dimerisation domain of Zinc Transporter ILQ34_26715 PF01545 Cation efflux family ILQ34_26720 PF07813 LTXXQ motif family protein ILQ34_26725 PF00486 Transcriptional regulatory protein, C terminal ILQ34_26725 PF00072 Response regulator receiver domain ILQ34_26730 PF16527 Two-component sensor protein CpxA, periplasmic domain ILQ34_26730 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_26730 PF00672 HAMP domain ILQ34_26730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_26735 PF03473 MOSC domain ILQ34_26735 PF03475 3-alpha domain ILQ34_26740 PF03812 2-keto-3-deoxygluconate permease ILQ34_26745 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ILQ34_26745 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ILQ34_26755 PF02311 AraC-like ligand binding domain ILQ34_26755 PF12833 Helix-turn-helix domain ILQ34_26760 PF02311 AraC-like ligand binding domain ILQ34_26760 PF12833 Helix-turn-helix domain ILQ34_26765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ILQ34_26765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ILQ34_26770 PF06134 L-rhamnose isomerase (RhaA) ILQ34_26775 PF00596 Class II Aldolase and Adducin N-terminal domain ILQ34_26780 PF05336 L-rhamnose mutarotase ILQ34_26790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_26795 PF02378 Phosphotransferase system, EIIC ILQ34_26795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ILQ34_26800 PF05343 M42 glutamyl aminopeptidase ILQ34_26805 PF08279 HTH domain ILQ34_26805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ILQ34_26810 PF12889 Protein of unknown function (DUF3829) ILQ34_26815 PF02634 FdhD/NarQ family ILQ34_26825 PF13247 4Fe-4S dicluster domain ILQ34_26825 PF09163 Formate dehydrogenase N, transmembrane ILQ34_26830 PF01292 Prokaryotic cytochrome b561 ILQ34_26835 PF04216 Protein involved in formate dehydrogenase formation ILQ34_26845 PF01402 Ribbon-helix-helix protein, copG family ILQ34_26860 PF00583 Acetyltransferase (GNAT) family ILQ34_26860 PF09500 Putative thioesterase (yiiD_Cterm) ILQ34_26865 PF02580 D-Tyr-tRNA(Tyr) deacylase ILQ34_26870 PF03631 Virulence factor BrkB ILQ34_26875 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_26880 PF00455 DeoR C terminal sensor domain ILQ34_26880 PF08220 DeoR-like helix-turn-helix domain ILQ34_26885 PF00294 pfkB family carbohydrate kinase ILQ34_26890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ILQ34_26890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ILQ34_26895 PF01791 DeoC/LacD family aldolase ILQ34_26905 PF01263 Aldose 1-epimerase ILQ34_26915 PF01055 Glycosyl hydrolases family 31 ILQ34_26930 PF06178 Oligogalacturonate-specific porin protein (KdgM) ILQ34_26935 PF07690 Major Facilitator Superfamily ILQ34_26940 PF01261 Xylose isomerase-like TIM barrel ILQ34_26945 PF00392 Bacterial regulatory proteins, gntR family ILQ34_26945 PF07702 UTRA domain ILQ34_26950 PF00679 Elongation factor G C-terminus ILQ34_26950 PF00009 Elongation factor Tu GTP binding domain ILQ34_26950 PF03144 Elongation factor Tu domain 2 ILQ34_26955 PF03951 Glutamine synthetase, beta-Grasp domain ILQ34_26955 PF00120 Glutamine synthetase, catalytic domain ILQ34_26960 PF00989 PAS fold ILQ34_26960 PF00512 His Kinase A (phospho-acceptor) domain ILQ34_26960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ILQ34_26965 PF00072 Response regulator receiver domain ILQ34_26965 PF00158 Sigma-54 interaction domain ILQ34_26965 PF02954 Bacterial regulatory protein, Fis family ILQ34_26975 PF06969 HemN C-terminal domain ILQ34_26975 PF04055 Radical SAM superfamily ILQ34_26980 PF04220 Der GTPase activator (YihI) ILQ34_26985 PF01926 50S ribosome-binding GTPase ILQ34_26990 PF01612 3'-5' exonuclease ILQ34_26990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ILQ34_26990 PF00476 DNA polymerase family A ILQ34_26990 PF01367 5'-3' exonuclease, C-terminal SAM fold ILQ34_27000 PF06097 Bacterial protein of unknown function (DUF945) ILQ34_27005 PF01323 DSBA-like thioredoxin domain ILQ34_27010 PF01636 Phosphotransferase enzyme family ILQ34_27015 PF06288 Protein of unknown function (DUF1040) ILQ34_27020 PF12804 MobA-like NTP transferase domain ILQ34_27025 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ILQ34_27055 PF12724 Flavodoxin domain ILQ34_27060 PF02386 Cation transport protein ILQ34_27065 PF01205 Uncharacterized protein family UPF0029 ILQ34_27065 PF09186 Domain of unknown function (DUF1949) ILQ34_27070 PF00557 Metallopeptidase family M24 ILQ34_27075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ILQ34_27075 PF00378 Enoyl-CoA hydratase/isomerase ILQ34_27075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ILQ34_27080 PF00108 Thiolase, N-terminal domain ILQ34_27080 PF02803 Thiolase, C-terminal domain ILQ34_27085 PF00175 Oxidoreductase NAD-binding domain ILQ34_27085 PF00970 Oxidoreductase FAD-binding domain ILQ34_27090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ILQ34_27095 PF02357 Transcription termination factor nusG ILQ34_27100 PF01026 TatD related DNase ILQ34_27105 PF00902 Sec-independent protein translocase protein (TatC) ILQ34_27115 PF02416 mttA/Hcf106 family ILQ34_27120 PF03109 ABC1 family ILQ34_27125 PF02036 SCP-2 sterol transfer family ILQ34_27130 PF01209 ubiE/COQ5 methyltransferase family ILQ34_27135 PF02646 RmuC family ILQ34_27140 PF01048 Phosphorylase superfamily ILQ34_27145 PF01738 Dienelactone hydrolase family ILQ34_27150 PF08267 Cobalamin-independent synthase, N-terminal domain ILQ34_27150 PF01717 Cobalamin-independent synthase, Catalytic domain ILQ34_27155 PF03466 LysR substrate binding domain ILQ34_27155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_27160 PF00892 EamA-like transporter family ILQ34_27170 PF12146 Serine aminopeptidase, S33 ILQ34_27175 PF01810 LysE type translocator ILQ34_27180 PF01810 LysE type translocator ILQ34_27185 PF00570 HRDC domain ILQ34_27185 PF16124 RecQ zinc-binding ILQ34_27185 PF09382 RQC domain ILQ34_27185 PF00270 DEAD/DEAH box helicase ILQ34_27185 PF00271 Helicase conserved C-terminal domain ILQ34_27190 PF02253 Phospholipase A1 ILQ34_27195 PF03061 Thioesterase superfamily ILQ34_27200 PF00892 EamA-like transporter family ILQ34_27210 PF01544 CorA-like Mg2+ transporter protein ILQ34_27225 PF01544 CorA-like Mg2+ transporter protein ILQ34_27230 PF09992 Phosphodiester glycosidase ILQ34_27235 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase ILQ34_27240 PF00580 UvrD/REP helicase N-terminal domain ILQ34_27240 PF13361 UvrD-like helicase C-terminal domain ILQ34_27245 PF13419 Haloacid dehalogenase-like hydrolase ILQ34_27250 PF00589 Phage integrase family ILQ34_27250 PF02899 Phage integrase, N-terminal SAM-like domain ILQ34_27255 PF04340 Protein of unknown function, DUF484 ILQ34_27260 PF01678 Diaminopimelate epimerase ILQ34_27265 PF13627 Prokaryotic lipoprotein-attachment site ILQ34_27275 PF01491 Frataxin-like domain ILQ34_27280 PF12633 Adenylate cyclase NT domain ILQ34_27280 PF01295 Adenylate cyclase, class-I ILQ34_27285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ILQ34_27285 PF03900 Porphobilinogen deaminase, C-terminal domain ILQ34_27290 PF02602 Uroporphyrinogen-III synthase HemD ILQ34_27295 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ILQ34_27300 PF07219 HemY protein N-terminus ILQ34_27300 PF07719 Tetratricopeptide repeat ILQ34_27305 PF00884 Sulfatase ILQ34_27310 PF13186 Iron-sulfur cluster-binding domain ILQ34_27310 PF04055 Radical SAM superfamily ILQ34_27340 PF00324 Amino acid permease ILQ34_27345 PF03808 Glycosyl transferase WecB/TagA/CpsF family ILQ34_27350 PF06899 WzyE protein, O-antigen assembly polymerase ILQ34_27355 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ILQ34_27360 PF01943 Polysaccharide biosynthesis protein ILQ34_27365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ILQ34_27375 PF00483 Nucleotidyl transferase ILQ34_27380 PF16363 GDP-mannose 4,6 dehydratase ILQ34_27385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ILQ34_27385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ILQ34_27385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ILQ34_27390 PF02350 UDP-N-acetylglucosamine 2-epimerase ILQ34_27395 PF02706 Chain length determinant protein ILQ34_27400 PF00953 Glycosyl transferase family 4 ILQ34_27405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ILQ34_27405 PF07497 Rho termination factor, RNA-binding domain ILQ34_27405 PF07498 Rho termination factor, N-terminal domain ILQ34_27415 PF00085 Thioredoxin ILQ34_27420 PF00270 DEAD/DEAH box helicase ILQ34_27420 PF00271 Helicase conserved C-terminal domain ILQ34_27425 PF02541 Ppx/GppA phosphatase family ILQ34_27430 PF00580 UvrD/REP helicase N-terminal domain ILQ34_27430 PF13361 UvrD-like helicase C-terminal domain ILQ34_27435 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ILQ34_27445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ILQ34_27445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ILQ34_27450 PF03466 LysR substrate binding domain ILQ34_27450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_27455 PF00585 C-terminal regulatory domain of Threonine dehydratase ILQ34_27455 PF00291 Pyridoxal-phosphate dependent enzyme ILQ34_27460 PF00920 Dehydratase family ILQ34_27465 PF01063 Amino-transferase class IV ILQ34_27475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ILQ34_27475 PF00205 Thiamine pyrophosphate enzyme, central domain ILQ34_27475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ILQ34_27485 PF08046 IlvGEDA operon leader peptide ILQ34_27490 PF01078 Magnesium chelatase, subunit ChlI ILQ34_27490 PF13335 Magnesium chelatase, subunit ChlI C-terminal ILQ34_27495 PF04219 Protein of unknown function, DUF ILQ34_27500 PF03466 LysR substrate binding domain ILQ34_27500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ILQ34_27535 PF07729 FCD domain ILQ34_27535 PF00392 Bacterial regulatory proteins, gntR family ILQ34_27540 PF07690 Major Facilitator Superfamily ILQ34_27545 PF00356 Bacterial regulatory proteins, lacI family ILQ34_27550 PF00294 pfkB family carbohydrate kinase ILQ34_27555 PF13407 Periplasmic binding protein domain ILQ34_27560 PF02653 Branched-chain amino acid transport system / permease component ILQ34_27565 PF00005 ABC transporter ILQ34_27570 PF05025 RbsD / FucU transport protein family ILQ34_27575 PF02705 K+ potassium transporter ILQ34_27580 PF12592 Protein of unknown function (DUF3763) ILQ34_27580 PF17868 AAA lid domain ILQ34_27580 PF07728 AAA domain (dynein-related subfamily) ILQ34_27585 PF05762 VWA domain containing CoxE-like protein ILQ34_27590 PF03590 Aspartate-ammonia ligase ILQ34_27595 PF01037 Lrp/AsnC ligand binding domain ILQ34_27600 PF00258 Flavodoxin ILQ34_27610 PF02387 IncFII RepA protein family ILQ34_27650 PF00141 Peroxidase ILQ34_27665 PF13018 Extended Signal Peptide of Type V secretion system ILQ34_27665 PF02395 Immunoglobulin A1 protease ILQ34_27665 PF03797 Autotransporter beta-domain ILQ34_27675 PF01522 Polysaccharide deacetylase ILQ34_27680 PF00534 Glycosyl transferases group 1 ILQ34_27680 PF13439 Glycosyltransferase Family 4 ILQ34_27685 PF00884 Sulfatase ILQ34_27690 PF03279 Bacterial lipid A biosynthesis acyltransferase ILQ34_27710 PF05717 IS66 Orf2 like protein ILQ34_27715 PF13007 Transposase C of IS166 homeodomain ILQ34_27715 PF13817 IS66 C-terminal element ILQ34_27715 PF13005 zinc-finger binding domain of transposase IS66 ILQ34_27715 PF03050 Transposase IS66 family ILQ34_27720 PF12561 ToxR activated gene A lipoprotein domain ILQ34_27720 PF17945 Beta/Gamma crystallin ILQ34_27725 PF11356 Type II secretion system protein C ILQ34_27730 PF00263 Bacterial type II and III secretion system protein ILQ34_27730 PF03958 Bacterial type II/III secretion system short domain ILQ34_27735 PF00437 Type II/IV secretion system protein ILQ34_27740 PF00482 Type II secretion system (T2SS), protein F ILQ34_27745 PF07963 Prokaryotic N-terminal methylation motif ILQ34_27745 PF08334 Type II secretion system (T2SS), protein G ILQ34_27750 PF12019 Type II transport protein GspH ILQ34_27755 PF07963 Prokaryotic N-terminal methylation motif ILQ34_27755 PF02501 Type II secretion system (T2SS), protein I ILQ34_27760 PF07963 Prokaryotic N-terminal methylation motif ILQ34_27760 PF11612 Type II secretion system (T2SS), protein J ILQ34_27765 PF03934 Type II secretion system (T2SS), protein K ILQ34_27770 PF05134 Type II secretion system (T2SS), protein L ILQ34_27770 PF12693 GspL periplasmic domain ILQ34_27775 PF04612 Type II secretion system (T2SS), protein M ILQ34_27780 PF06750 Bacterial Peptidase A24 N-terminal domain ILQ34_27780 PF01478 Type IV leader peptidase family ILQ34_27785 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ILQ34_27795 PF02794 RTX toxin acyltransferase family ILQ34_27800 PF08339 RTX C-terminal domain ILQ34_27800 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ILQ34_27800 PF02382 N-terminal domain in RTX protein ILQ34_27805 PF00005 ABC transporter ILQ34_27805 PF03412 Peptidase C39 family ILQ34_27805 PF00664 ABC transporter transmembrane region ILQ34_27825 PF00589 Phage integrase family ILQ34_27830 PF01051 Initiator Replication protein ILQ34_27850 PF07362 Post-segregation antitoxin CcdA ILQ34_27855 PF01845 CcdB protein ILQ34_27860 PF00589 Phage integrase family ILQ34_27870 PF01051 Initiator Replication protein ILQ34_27875 PF13614 AAA domain ILQ34_27880 PF18090 Centromere-binding protein HTH domain ILQ34_27880 PF02195 ParB-like nuclease domain ILQ34_27885 PF06924 Protein of unknown function (DUF1281) ILQ34_27895 PF01555 DNA methylase ILQ34_27905 PF07128 Protein of unknown function (DUF1380) ILQ34_27915 PF03230 Antirestriction protein ILQ34_27920 PF07128 Protein of unknown function (DUF1380) ILQ34_27960 PF00436 Single-strand binding protein family ILQ34_27965 PF06006 Bacterial protein of unknown function (DUF905) ILQ34_27970 PF02195 ParB-like nuclease domain ILQ34_27975 PF06290 Plasmid SOS inhibition protein (PsiB) ILQ34_27980 PF06952 PsiA protein ILQ34_27985 PF01848 Hok/gef family ILQ34_28020 PF12920 TcdA/TcdB pore forming domain ILQ34_28020 PF12918 TcdB toxin N-terminal helical domain ILQ34_28020 PF12919 TcdA/TcdB catalytic glycosyltransferase domain ILQ34_28020 PF11713 Peptidase C80 family ILQ34_28020 PF01473 Putative cell wall binding repeat ILQ34_28045 PF05857 TraX protein ILQ34_28050 PF00561 alpha/beta hydrolase fold ILQ34_28055 PF12602 Fertility inhibition protein N terminal ILQ34_28055 PF04352 ProQ/FINO family ILQ34_28065 PF00565 Staphylococcal nuclease homologue ILQ34_28070 PF05321 Haemolysin expression modulating protein ILQ34_28080 PF10723 Replication regulatory protein RepB ILQ34_28095 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA ILQ34_28100 PF15935 RNase LS, bacterial toxin