locus-tag class description HVY54_00005 PF11638 DnaA N-terminal domain HVY54_00005 PF08299 Bacterial dnaA protein helix-turn-helix HVY54_00005 PF00308 Bacterial dnaA protein HVY54_00010 PF02767 DNA polymerase III beta subunit, central domain HVY54_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HVY54_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HVY54_00015 PF02463 RecF/RecN/SMC N terminal domain HVY54_00020 PF01751 Toprim domain HVY54_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_00020 PF18053 DNA gyrase B subunit insert domain HVY54_00020 PF00204 DNA gyrase B HVY54_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HVY54_00025 PF06078 Bacterial protein of unknown function (DUF937) HVY54_00040 PF01494 FAD binding domain HVY54_00045 PF12566 Protein of unknown function (DUF3748) HVY54_00045 PF07676 WD40-like Beta Propeller Repeat HVY54_00050 PF07119 Protein of unknown function (DUF1375) HVY54_00055 PF00011 Hsp20/alpha crystallin family HVY54_00060 PF00011 Hsp20/alpha crystallin family HVY54_00065 PF02080 TrkA-C domain HVY54_00065 PF06826 Predicted Permease Membrane Region HVY54_00070 PF07702 UTRA domain HVY54_00070 PF00392 Bacterial regulatory proteins, gntR family HVY54_00075 PF00367 phosphotransferase system, EIIB HVY54_00075 PF02378 Phosphotransferase system, EIIC HVY54_00080 PF02056 Family 4 glycosyl hydrolase HVY54_00080 PF11975 Family 4 glycosyl hydrolase C-terminal domain HVY54_00085 PF02311 AraC-like ligand binding domain HVY54_00085 PF12833 Helix-turn-helix domain HVY54_00090 PF00474 Sodium:solute symporter family HVY54_00095 PF00884 Sulfatase HVY54_00095 PF16347 Domain of unknown function (DUF4976) HVY54_00105 PF02656 Domain of unknown function (DUF202) HVY54_00110 PF02656 Domain of unknown function (DUF202) HVY54_00120 PF07690 Major Facilitator Superfamily HVY54_00125 PF13939 Toxin TisB, type I toxin-antitoxin system HVY54_00130 PF08049 IlvB leader peptide HVY54_00135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVY54_00135 PF00205 Thiamine pyrophosphate enzyme, central domain HVY54_00135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_00140 PF01842 ACT domain HVY54_00155 PF00072 Response regulator receiver domain HVY54_00155 PF00196 Bacterial regulatory proteins, luxR family HVY54_00160 PF07730 Histidine kinase HVY54_00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_00160 PF05231 MASE1 HVY54_00165 PF07690 Major Facilitator Superfamily HVY54_00170 PF07690 Major Facilitator Superfamily HVY54_00175 PF06711 Protein of unknown function (DUF1198) HVY54_00185 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HVY54_00190 PF00232 Glycosyl hydrolase family 1 HVY54_00195 PF02378 Phosphotransferase system, EIIC HVY54_00200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_00205 PF00356 Bacterial regulatory proteins, lacI family HVY54_00215 PF13382 Adenine deaminase C-terminal domain HVY54_00215 PF01979 Amidohydrolase family HVY54_00220 PF00860 Permease family HVY54_00225 PF06711 Protein of unknown function (DUF1198) HVY54_00245 PF00486 Transcriptional regulatory protein, C terminal HVY54_00250 PF06511 Type III secretion systems tip complex components HVY54_00270 PF07720 Tetratricopeptide repeat HVY54_00280 PF03180 NLPA lipoprotein HVY54_00285 PF00892 EamA-like transporter family HVY54_00290 PF07690 Major Facilitator Superfamily HVY54_00335 PF00436 Single-strand binding protein family HVY54_00340 PF01055 Glycosyl hydrolases family 31 HVY54_00340 PF13802 Galactose mutarotase-like HVY54_00340 PF16338 Domain of unknown function (DUF4968) HVY54_00340 PF17137 Domain of unknown function (DUF5110) HVY54_00345 PF07690 Major Facilitator Superfamily HVY54_00350 PF00356 Bacterial regulatory proteins, lacI family HVY54_00360 PF13356 Arm DNA-binding domain HVY54_00360 PF00589 Phage integrase family HVY54_00360 PF14659 Phage integrase, N-terminal SAM-like domain HVY54_00375 PF01055 Glycosyl hydrolases family 31 HVY54_00375 PF13802 Galactose mutarotase-like HVY54_00385 PF00860 Permease family HVY54_00390 PF03616 Sodium/glutamate symporter HVY54_00395 PF17191 RecG wedge domain HVY54_00395 PF00271 Helicase conserved C-terminal domain HVY54_00395 PF00270 DEAD/DEAH box helicase HVY54_00400 PF12105 SpoU, rRNA methylase, C-terminal HVY54_00400 PF00588 SpoU rRNA Methylase family HVY54_00405 PF04607 Region found in RelA / SpoT proteins HVY54_00405 PF02824 TGS domain HVY54_00405 PF13291 ACT domain HVY54_00410 PF01192 RNA polymerase Rpb6 HVY54_00415 PF00625 Guanylate kinase HVY54_00420 PF03120 NAD-dependent DNA ligase OB-fold domain HVY54_00420 PF01653 NAD-dependent DNA ligase adenylation domain HVY54_00425 PF03458 UPF0126 domain HVY54_00435 PF03755 YicC-like family, N-terminal region HVY54_00435 PF08340 Domain of unknown function (DUF1732) HVY54_00440 PF03725 3' exoribonuclease family, domain 2 HVY54_00440 PF01138 3' exoribonuclease family, domain 1 HVY54_00445 PF00156 Phosphoribosyl transferase domain HVY54_00450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HVY54_00455 PF00440 Bacterial regulatory proteins, tetR family HVY54_00460 PF00692 dUTPase HVY54_00465 PF04127 DNA / pantothenate metabolism flavoprotein HVY54_00465 PF02441 Flavoprotein HVY54_00470 PF04002 RadC-like JAB domain HVY54_00475 PF00830 Ribosomal L28 family HVY54_00480 PF00471 Ribosomal protein L33 HVY54_00485 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HVY54_00485 PF06827 Zinc finger found in FPG and IleRS HVY54_00485 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HVY54_00490 PF01467 Cytidylyltransferase-like HVY54_00495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HVY54_00500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HVY54_00505 PF00534 Glycosyl transferases group 1 HVY54_00505 PF13439 Glycosyltransferase Family 4 HVY54_00515 PF01501 Glycosyl transferase family 8 HVY54_00515 PF08437 Glycosyl transferase family 8 C-terminal HVY54_00520 PF01501 Glycosyl transferase family 8 HVY54_00520 PF08437 Glycosyl transferase family 8 C-terminal HVY54_00525 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) HVY54_00530 PF08437 Glycosyl transferase family 8 C-terminal HVY54_00530 PF01501 Glycosyl transferase family 8 HVY54_00545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HVY54_00550 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HVY54_00555 PF01370 NAD dependent epimerase/dehydratase family HVY54_00560 PF00155 Aminotransferase class I and II HVY54_00565 PF00107 Zinc-binding dehydrogenase HVY54_00565 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_00570 PF00535 Glycosyl transferase family 2 HVY54_00575 PF04748 Divergent polysaccharide deacetylase HVY54_00580 PF01551 Peptidase family M23 HVY54_00585 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HVY54_00585 PF01676 Metalloenzyme superfamily HVY54_00590 PF00581 Rhodanese-like domain HVY54_00595 PF00462 Glutaredoxin HVY54_00600 PF02556 Preprotein translocase subunit SecB HVY54_00605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HVY54_00605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HVY54_00610 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_00610 PF06426 Serine acetyltransferase, N-terminal HVY54_00615 PF00588 SpoU rRNA Methylase family HVY54_00620 PF01070 FMN-dependent dehydrogenase HVY54_00625 PF00392 Bacterial regulatory proteins, gntR family HVY54_00625 PF07729 FCD domain HVY54_00630 PF02652 L-lactate permease HVY54_00635 PF05662 Coiled stalk of trimeric autotransporter adhesin HVY54_00635 PF05658 Head domain of trimeric autotransporter adhesin HVY54_00635 PF03895 YadA-like membrane anchor domain HVY54_00635 PF13018 Extended Signal Peptide of Type V secretion system HVY54_00640 PF11622 Protein of unknown function (DUF3251) HVY54_00645 PF10928 Protein of unknown function (DUF2810) HVY54_00655 PF05068 Mannitol repressor HVY54_00660 PF08125 Mannitol dehydrogenase C-terminal domain HVY54_00660 PF01232 Mannitol dehydrogenase Rossmann domain HVY54_00665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_00665 PF02378 Phosphotransferase system, EIIC HVY54_00665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_00670 PF11742 Protein of unknown function (DUF3302) HVY54_00675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_00675 PF00529 HlyD membrane-fusion protein of T1SS HVY54_00695 PF00577 Outer membrane usher protein HVY54_00695 PF13954 PapC N-terminal domain HVY54_00700 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_00700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_00720 PF03797 Autotransporter beta-domain HVY54_00720 PF13018 Extended Signal Peptide of Type V secretion system HVY54_00720 PF02395 Immunoglobulin A1 protease HVY54_00725 PF13417 Glutathione S-transferase, N-terminal domain HVY54_00725 PF00043 Glutathione S-transferase, C-terminal domain HVY54_00730 PF12390 Selenocysteine synthase N terminal HVY54_00730 PF03841 L-seryl-tRNA selenium transferase HVY54_00735 PF03144 Elongation factor Tu domain 2 HVY54_00735 PF09106 Elongation factor SelB, winged helix HVY54_00735 PF00009 Elongation factor Tu GTP binding domain HVY54_00735 PF09107 Elongation factor SelB, winged helix HVY54_00740 PF00465 Iron-containing alcohol dehydrogenase HVY54_00745 PF00171 Aldehyde dehydrogenase family HVY54_00755 PF11742 Protein of unknown function (DUF3302) HVY54_00760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_00760 PF00529 HlyD membrane-fusion protein of T1SS HVY54_00765 PF03466 LysR substrate binding domain HVY54_00765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_00770 PF06629 MltA-interacting protein MipA HVY54_00775 PF07944 Beta-L-arabinofuranosidase, GH127 HVY54_00795 PF13247 4Fe-4S dicluster domain HVY54_00800 PF00155 Aminotransferase class I and II HVY54_00805 PF00128 Alpha amylase, catalytic domain HVY54_00810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HVY54_00815 PF12833 Helix-turn-helix domain HVY54_00820 PF02653 Branched-chain amino acid transport system / permease component HVY54_00825 PF00005 ABC transporter HVY54_00830 PF13407 Periplasmic binding protein domain HVY54_00840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVY54_00840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVY54_00845 PF05360 yiaA/B two helix domain HVY54_00850 PF05360 yiaA/B two helix domain HVY54_00855 PF01757 Acyltransferase family HVY54_00860 PF13983 YsaB-like lipoprotein HVY54_00865 PF02091 Glycyl-tRNA synthetase alpha subunit HVY54_00870 PF02092 Glycyl-tRNA synthetase beta subunit HVY54_00870 PF05746 DALR anticodon binding domain HVY54_00875 PF01848 Hok/gef family HVY54_00880 PF00313 'Cold-shock' DNA-binding domain HVY54_00885 PF01381 Helix-turn-helix HVY54_00890 PF11254 Protein of unknown function (DUF3053) HVY54_00895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVY54_00895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVY54_00900 PF13488 Glycine zipper HVY54_00900 PF00691 OmpA family HVY54_00905 PF00384 Molybdopterin oxidoreductase HVY54_00905 PF01568 Molydopterin dinucleotide binding domain HVY54_00905 PF18364 Molybdopterin oxidoreductase N-terminal domain HVY54_00910 PF00583 Acetyltransferase (GNAT) family HVY54_00915 PF03352 Methyladenine glycosylase HVY54_00920 PF03797 Autotransporter beta-domain HVY54_00925 PF07690 Major Facilitator Superfamily HVY54_00930 PF00419 Fimbrial protein HVY54_00935 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_00935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_00940 PF13953 PapC C-terminal domain HVY54_00940 PF13954 PapC N-terminal domain HVY54_00940 PF00577 Outer membrane usher protein HVY54_00945 PF00419 Fimbrial protein HVY54_00950 PF00419 Fimbrial protein HVY54_00955 PF08019 Phosphoethanolamine transferase EptA/EptB HVY54_00955 PF00884 Sulfatase HVY54_00965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_00975 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_00980 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_00980 PF12911 N-terminal TM domain of oligopeptide transport permease C HVY54_00985 PF00005 ABC transporter HVY54_00985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_00990 PF00005 ABC transporter HVY54_00990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_00995 PF03222 Tryptophan/tyrosine permease family HVY54_01000 PF13940 Toxin Ldr, type I toxin-antitoxin system HVY54_01005 PF13940 Toxin Ldr, type I toxin-antitoxin system HVY54_01010 PF13940 Toxin Ldr, type I toxin-antitoxin system HVY54_01015 PF11658 Cellulose biosynthesis protein BcsG HVY54_01020 PF11120 Cellulose biosynthesis protein BcsF HVY54_01025 PF10995 Cellulose biosynthesis GIL HVY54_01030 PF10945 Cellulose biosynthesis protein BcsR HVY54_01035 PF06564 Cellulose biosynthesis protein BcsQ HVY54_01040 PF07238 PilZ domain HVY54_01040 PF00535 Glycosyl transferase family 2 HVY54_01040 PF03552 Cellulose synthase HVY54_01045 PF03170 Bacterial cellulose synthase subunit HVY54_01050 PF01270 Glycosyl hydrolases family 8 HVY54_01055 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HVY54_01060 PF00563 EAL domain HVY54_01060 PF00672 HAMP domain HVY54_01060 PF17154 Gammaproteobacterial periplasmic sensor domain HVY54_01060 PF00990 Diguanylate cyclase, GGDEF domain HVY54_01065 PF00375 Sodium:dicarboxylate symporter family HVY54_01070 PF00675 Insulinase (Peptidase family M16) HVY54_01070 PF05193 Peptidase M16 inactive domain HVY54_01075 PF00294 pfkB family carbohydrate kinase HVY54_01080 PF00563 EAL domain HVY54_01085 PF05170 AsmA family HVY54_01090 PF07690 Major Facilitator Superfamily HVY54_01090 PF00083 Sugar (and other) transporter HVY54_01095 PF03631 Virulence factor BrkB HVY54_01100 PF03466 LysR substrate binding domain HVY54_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_01105 PF00196 Bacterial regulatory proteins, luxR family HVY54_01110 PF01204 Trehalase HVY54_01115 PF03150 Di-haem cytochrome c peroxidase HVY54_01115 PF00034 Cytochrome c HVY54_01115 PF14376 Haem-binding domain HVY54_01120 PF00282 Pyridoxal-dependent decarboxylase conserved domain HVY54_01125 PF12833 Helix-turn-helix domain HVY54_01130 PF12833 Helix-turn-helix domain HVY54_01135 PF00873 AcrB/AcrD/AcrF family HVY54_01140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_01140 PF00529 HlyD membrane-fusion protein of T1SS HVY54_01150 PF00196 Bacterial regulatory proteins, luxR family HVY54_01155 PF03729 Short repeat of unknown function (DUF308) HVY54_01160 PF06411 HdeA/HdeB family HVY54_01165 PF06411 HdeA/HdeB family HVY54_01170 PF02308 MgtC family HVY54_01175 PF00005 ABC transporter HVY54_01180 PF01032 FecCD transport family HVY54_01190 PF06228 Haem utilisation ChuX/HutX HVY54_01195 PF04055 Radical SAM superfamily HVY54_01200 PF01497 Periplasmic binding protein HVY54_01205 PF07715 TonB-dependent Receptor Plug Domain HVY54_01205 PF00593 TonB dependent receptor HVY54_01210 PF05171 Haemin-degrading HemS.ChuX domain HVY54_01215 PF00196 Bacterial regulatory proteins, luxR family HVY54_01220 PF03843 Outer membrane lipoprotein Slp family HVY54_01230 PF03960 ArsC family HVY54_01245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVY54_01245 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_01250 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HVY54_01255 PF01432 Peptidase family M3 HVY54_01260 PF04445 Putative SAM-dependent methyltransferase HVY54_01265 PF00854 POT family HVY54_01270 PF00582 Universal stress protein family HVY54_01275 PF10625 Universal stress protein B (UspB) HVY54_01280 PF01384 Phosphate transporter family HVY54_01290 PF10951 Protein of unknown function (DUF2776) HVY54_01295 PF13258 Domain of unknown function (DUF4049) HVY54_01300 PF13258 Domain of unknown function (DUF4049) HVY54_01305 PF13533 Biotin-lipoyl like HVY54_01310 PF00005 ABC transporter HVY54_01330 PF01402 Ribbon-helix-helix protein, copG family HVY54_01330 PF08753 NikR C terminal nickel binding domain HVY54_01335 PF00005 ABC transporter HVY54_01340 PF00005 ABC transporter HVY54_01345 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_01350 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_01355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_01360 PF01648 4'-phosphopantetheinyl transferase superfamily HVY54_01365 PF02801 Beta-ketoacyl synthase, C-terminal domain HVY54_01365 PF00109 Beta-ketoacyl synthase, N-terminal domain HVY54_01380 PF02801 Beta-ketoacyl synthase, C-terminal domain HVY54_01380 PF00109 Beta-ketoacyl synthase, N-terminal domain HVY54_01405 PF00535 Glycosyl transferase family 2 HVY54_01415 PF00501 AMP-binding enzyme HVY54_01415 PF00550 Phosphopantetheine attachment site HVY54_01415 PF00975 Thioesterase domain HVY54_01415 PF13193 AMP-binding enzyme C-terminal domain HVY54_01415 PF00668 Condensation domain HVY54_01425 PF00550 Phosphopantetheine attachment site HVY54_01430 PF00550 Phosphopantetheine attachment site HVY54_01435 PF01553 Acyltransferase HVY54_01445 PF00891 O-methyltransferase domain HVY54_01455 PF01594 AI-2E family transporter HVY54_01460 PF07690 Major Facilitator Superfamily HVY54_01465 PF08786 DcrB HVY54_01470 PF02592 Putative vitamin uptake transporter HVY54_01475 PF01206 Sulfurtransferase TusA HVY54_01480 PF00403 Heavy-metal-associated domain HVY54_01485 PF07947 YhhN family HVY54_01490 PF10694 Protein of unknown function (DUF2500) HVY54_01495 PF06611 Protein of unknown function (DUF1145) HVY54_01505 PF00448 SRP54-type protein, GTPase domain HVY54_01505 PF02881 SRP54-type protein, helical bundle domain HVY54_01510 PF00005 ABC transporter HVY54_01515 PF02687 FtsX-like permease family HVY54_01515 PF18075 FtsX extracellular domain HVY54_01520 PF04542 Sigma-70 region 2 HVY54_01520 PF04545 Sigma-70, region 4 HVY54_01525 PF13458 Periplasmic binding protein HVY54_01530 PF12568 Acetyltransferase (GNAT) domain, PanZ HVY54_01535 PF13458 Periplasmic binding protein HVY54_01540 PF02653 Branched-chain amino acid transport system / permease component HVY54_01545 PF02653 Branched-chain amino acid transport system / permease component HVY54_01545 PF11862 Domain of unknown function (DUF3382) HVY54_01550 PF12399 Branched-chain amino acid ATP-binding cassette transporter HVY54_01550 PF00005 ABC transporter HVY54_01555 PF00005 ABC transporter HVY54_01565 PF13416 Bacterial extracellular solute-binding protein HVY54_01570 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_01575 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_01580 PF00005 ABC transporter HVY54_01580 PF17912 MalK OB fold domain HVY54_01585 PF03009 Glycerophosphoryl diester phosphodiesterase family HVY54_01590 PF10956 Protein of unknown function (DUF2756) HVY54_01600 PF15567 Immunity protein 35 HVY54_01615 PF05638 Type VI secretion system effector, Hcp HVY54_01620 PF00583 Acetyltransferase (GNAT) family HVY54_01625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HVY54_01625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVY54_01630 PF17954 Quercetinase C-terminal cupin domain HVY54_01630 PF02678 Pirin HVY54_01635 PF00356 Bacterial regulatory proteins, lacI family HVY54_01635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVY54_01640 PF01202 Shikimate kinase HVY54_01645 PF02447 GntP family permease HVY54_01650 PF16124 RecQ zinc-binding HVY54_01650 PF00271 Helicase conserved C-terminal domain HVY54_01650 PF00270 DEAD/DEAH box helicase HVY54_01650 PF09382 RQC domain HVY54_01650 PF00570 HRDC domain HVY54_01660 PF01914 MarC family integral membrane protein HVY54_01665 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVY54_01665 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVY54_01670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HVY54_01670 PF02806 Alpha amylase, C-terminal all-beta domain HVY54_01670 PF00128 Alpha amylase, catalytic domain HVY54_01675 PF00128 Alpha amylase, catalytic domain HVY54_01675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HVY54_01675 PF18390 Glycogen debranching enzyme C-terminal domain HVY54_01680 PF00483 Nucleotidyl transferase HVY54_01685 PF08323 Starch synthase catalytic domain HVY54_01685 PF00534 Glycosyl transferases group 1 HVY54_01690 PF00343 Carbohydrate phosphorylase HVY54_01710 PF01266 FAD dependent oxidoreductase HVY54_01710 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HVY54_01715 PF00581 Rhodanese-like domain HVY54_01720 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HVY54_01720 PF01694 Rhomboid family HVY54_01725 PF00455 DeoR C terminal sensor domain HVY54_01725 PF08220 DeoR-like helix-turn-helix domain HVY54_01730 PF00158 Sigma-54 interaction domain HVY54_01730 PF06956 Regulator of RNA terminal phosphate cyclase HVY54_01735 PF01139 tRNA-splicing ligase RtcB HVY54_01740 PF01137 RNA 3'-terminal phosphate cyclase HVY54_01740 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain HVY54_01755 PF17874 MalT-like TPR region HVY54_01755 PF00196 Bacterial regulatory proteins, luxR family HVY54_01760 PF00343 Carbohydrate phosphorylase HVY54_01765 PF02446 4-alpha-glucanotransferase HVY54_01770 PF02447 GntP family permease HVY54_01775 PF01521 Iron-sulphur cluster biosynthesis HVY54_01775 PF01106 NifU-like domain HVY54_01780 PF00156 Phosphoribosyl transferase domain HVY54_01785 PF00561 alpha/beta hydrolase fold HVY54_01800 PF04754 Putative transposase, YhgA-like HVY54_01805 PF09012 FeoC like transcriptional regulator HVY54_01810 PF07664 Ferrous iron transport protein B C terminus HVY54_01810 PF02421 Ferrous iron transport protein B HVY54_01810 PF17910 FeoB cytosolic helical domain HVY54_01810 PF07670 Nucleoside recognition HVY54_01815 PF04023 FeoA domain HVY54_01820 PF09371 Tex-like protein N-terminal domain HVY54_01820 PF00575 S1 RNA binding domain HVY54_01820 PF17674 HHH domain HVY54_01820 PF16921 Tex protein YqgF-like domain HVY54_01825 PF03449 Transcription elongation factor, N-terminal HVY54_01825 PF01272 Transcription elongation factor, GreA/GreB, C-term HVY54_01830 PF00486 Transcriptional regulatory protein, C terminal HVY54_01830 PF00072 Response regulator receiver domain HVY54_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_01835 PF00512 His Kinase A (phospho-acceptor) domain HVY54_01835 PF00672 HAMP domain HVY54_01840 PF01293 Phosphoenolpyruvate carboxykinase HVY54_01845 PF13687 Domain of unknown function (DUF4153) HVY54_01850 PF01430 Hsp33 protein HVY54_01855 PF01479 S4 domain HVY54_01860 PF13419 Haloacid dehalogenase-like hydrolase HVY54_01865 PF07095 Intracellular growth attenuator protein IgaA HVY54_01870 PF00293 NUDIX domain HVY54_01875 PF17092 Penicillin-binding protein OB-like domain HVY54_01875 PF00912 Transglycosylase HVY54_01875 PF00905 Penicillin binding protein transpeptidase domain HVY54_01885 PF05137 Fimbrial assembly protein (PilN) HVY54_01895 PF10748 DNA utilization proteins HofP HVY54_01900 PF03958 Bacterial type II/III secretion system short domain HVY54_01900 PF00263 Bacterial type II and III secretion system protein HVY54_01905 PF01202 Shikimate kinase HVY54_01910 PF01761 3-dehydroquinate synthase HVY54_01915 PF05036 Sporulation related domain HVY54_01920 PF02086 D12 class N6 adenine-specific DNA methyltransferase HVY54_01925 PF00834 Ribulose-phosphate 3 epimerase family HVY54_01930 PF13419 Haloacid dehalogenase-like hydrolase HVY54_01935 PF00579 tRNA synthetases class I (W and Y) HVY54_01940 PF14502 Helix-turn-helix domain HVY54_01940 PF14503 YhfZ C-terminal domain HVY54_01950 PF01168 Alanine racemase, N-terminal domain HVY54_01955 PF01676 Metalloenzyme superfamily HVY54_01960 PF02126 Phosphotriesterase family HVY54_01965 PF10941 Protein of unknown function DUF2620 HVY54_01970 PF10797 Protein of unknown function HVY54_01975 PF00155 Aminotransferase class I and II HVY54_01980 PF07702 UTRA domain HVY54_01980 PF00392 Bacterial regulatory proteins, gntR family HVY54_01985 PF00294 pfkB family carbohydrate kinase HVY54_01990 PF01261 Xylose isomerase-like TIM barrel HVY54_01995 PF01380 SIS domain HVY54_02000 PF13520 Amino acid permease HVY54_02005 PF13978 Protein of unknown function (DUF4223) HVY54_02010 PF14824 Sirohaem biosynthesis protein central HVY54_02010 PF10414 Sirohaem synthase dimerisation region HVY54_02010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HVY54_02015 PF01226 Formate/nitrite transporter HVY54_02020 PF13806 Rieske-like [2Fe-2S] domain HVY54_02025 PF18267 Rubredoxin NAD+ reductase C-terminal domain HVY54_02025 PF04324 BFD-like [2Fe-2S] binding domain HVY54_02025 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_02025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HVY54_02025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HVY54_02030 PF07690 Major Facilitator Superfamily HVY54_02035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HVY54_02040 PF10832 Protein of unknown function (DUF2559) HVY54_02045 PF02661 Fic/DOC family HVY54_02050 PF00117 Glutamine amidotransferase class-I HVY54_02055 PF00202 Aminotransferase class-III HVY54_02060 PF12805 FUSC-like inner membrane protein yccS HVY54_02065 PF00027 Cyclic nucleotide-binding domain HVY54_02065 PF13545 Crp-like helix-turn-helix domain HVY54_02070 PF02566 OsmC-like protein HVY54_02075 PF00485 Phosphoribulokinase / Uridine kinase family HVY54_02080 PF06794 Uncharacterised protein family (UPF0270) HVY54_02085 PF00561 alpha/beta hydrolase fold HVY54_02090 PF00005 ABC transporter HVY54_02090 PF12848 ABC transporter HVY54_02095 PF02525 Flavodoxin-like fold HVY54_02100 PF02254 TrkA-N domain HVY54_02100 PF00999 Sodium/hydrogen exchanger family HVY54_02105 PF09526 Probable metal-binding protein (DUF2387) HVY54_02110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVY54_02115 PF04102 SlyX HVY54_02120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVY54_02120 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HVY54_02125 PF08348 YheO-like PAS domain HVY54_02125 PF13309 HTH domain HVY54_02130 PF02635 DsrE/DsrF-like family HVY54_02135 PF02635 DsrE/DsrF-like family HVY54_02140 PF04077 DsrH like protein HVY54_02145 PF00164 Ribosomal protein S12/S23 HVY54_02150 PF00177 Ribosomal protein S7p/S5e HVY54_02155 PF03144 Elongation factor Tu domain 2 HVY54_02155 PF00009 Elongation factor Tu GTP binding domain HVY54_02155 PF00679 Elongation factor G C-terminus HVY54_02155 PF14492 Elongation Factor G, domain II HVY54_02155 PF03764 Elongation factor G, domain IV HVY54_02160 PF03143 Elongation factor Tu C-terminal domain HVY54_02160 PF00009 Elongation factor Tu GTP binding domain HVY54_02160 PF03144 Elongation factor Tu domain 2 HVY54_02165 PF04324 BFD-like [2Fe-2S] binding domain HVY54_02170 PF00210 Ferritin-like domain HVY54_02175 PF01478 Type IV leader peptidase family HVY54_02180 PF00338 Ribosomal protein S10p/S20e HVY54_02185 PF00297 Ribosomal protein L3 HVY54_02190 PF00573 Ribosomal protein L4/L1 family HVY54_02195 PF00276 Ribosomal protein L23 HVY54_02200 PF03947 Ribosomal Proteins L2, C-terminal domain HVY54_02200 PF00181 Ribosomal Proteins L2, RNA binding domain HVY54_02205 PF00203 Ribosomal protein S19 HVY54_02210 PF00237 Ribosomal protein L22p/L17e HVY54_02215 PF07650 KH domain HVY54_02215 PF00189 Ribosomal protein S3, C-terminal domain HVY54_02220 PF00252 Ribosomal protein L16p/L10e HVY54_02225 PF00831 Ribosomal L29 protein HVY54_02230 PF00366 Ribosomal protein S17 HVY54_02235 PF00238 Ribosomal protein L14p/L23e HVY54_02240 PF00467 KOW motif HVY54_02240 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HVY54_02245 PF00673 ribosomal L5P family C-terminus HVY54_02245 PF00281 Ribosomal protein L5 HVY54_02250 PF00253 Ribosomal protein S14p/S29e HVY54_02255 PF00410 Ribosomal protein S8 HVY54_02260 PF00347 Ribosomal protein L6 HVY54_02265 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HVY54_02270 PF03719 Ribosomal protein S5, C-terminal domain HVY54_02270 PF00333 Ribosomal protein S5, N-terminal domain HVY54_02275 PF00327 Ribosomal protein L30p/L7e HVY54_02280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HVY54_02285 PF00344 SecY translocase HVY54_02290 PF00444 Ribosomal protein L36 HVY54_02295 PF00416 Ribosomal protein S13/S18 HVY54_02300 PF00411 Ribosomal protein S11 HVY54_02305 PF00163 Ribosomal protein S4/S9 N-terminal domain HVY54_02305 PF01479 S4 domain HVY54_02310 PF01000 RNA polymerase Rpb3/RpoA insert domain HVY54_02310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HVY54_02310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HVY54_02315 PF01196 Ribosomal protein L17 HVY54_02320 PF09350 Domain of unknown function (DUF1992) HVY54_02325 PF13411 MerR HTH family regulatory protein HVY54_02330 PF03889 Alternative ribosome-rescue factor A HVY54_02335 PF01741 Large-conductance mechanosensitive channel, MscL HVY54_02340 PF02254 TrkA-N domain HVY54_02340 PF02080 TrkA-C domain HVY54_02345 PF01189 16S rRNA methyltransferase RsmB/F HVY54_02345 PF01029 NusB family HVY54_02350 PF00551 Formyl transferase HVY54_02350 PF02911 Formyl transferase, C-terminal domain HVY54_02355 PF01327 Polypeptide deformylase HVY54_02360 PF17782 DprA winged helix domain HVY54_02360 PF02481 DNA recombination-mediator protein A HVY54_02365 PF04361 Protein of unknown function (DUF494) HVY54_02370 PF01396 Topoisomerase DNA binding C4 zinc finger HVY54_02375 PF01300 Telomere recombination HVY54_02380 PF08501 Shikimate dehydrogenase substrate binding domain HVY54_02380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HVY54_02380 PF01488 Shikimate / quinate 5-dehydrogenase HVY54_02385 PF07369 Protein of unknown function (DUF1488) HVY54_02390 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_02430 PF00005 ABC transporter HVY54_02435 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_02440 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_02445 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_02455 PF00873 AcrB/AcrD/AcrF family HVY54_02460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_02460 PF00529 HlyD membrane-fusion protein of T1SS HVY54_02465 PF08361 MAATS-type transcriptional repressor, C-terminal region HVY54_02465 PF00440 Bacterial regulatory proteins, tetR family HVY54_02470 PF10831 Protein of unknown function (DUF2556) HVY54_02475 PF01555 DNA methylase HVY54_02480 PF02954 Bacterial regulatory protein, Fis family HVY54_02485 PF01207 Dihydrouridine synthase (Dus) HVY54_02495 PF00474 Sodium:solute symporter family HVY54_02500 PF06196 Protein of unknown function (DUF997) HVY54_02505 PF02785 Biotin carboxylase C-terminal domain HVY54_02505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HVY54_02505 PF00289 Biotin carboxylase, N-terminal domain HVY54_02510 PF00364 Biotin-requiring enzyme HVY54_02520 PF00107 Zinc-binding dehydrogenase HVY54_02520 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_02525 PF00563 EAL domain HVY54_02525 PF17157 Gammaproteobacterial periplasmic sensor domain HVY54_02525 PF00990 Diguanylate cyclase, GGDEF domain HVY54_02535 PF04085 rod shape-determining protein MreC HVY54_02540 PF04093 rod shape-determining protein MreD HVY54_02545 PF02545 Maf-like protein HVY54_02550 PF10150 Ribonuclease E/G family HVY54_02550 PF00575 S1 RNA binding domain HVY54_02555 PF13116 Protein of unknown function HVY54_02555 PF13502 AsmA-like C-terminal region HVY54_02560 PF01523 Putative modulator of DNA gyrase HVY54_02565 PF03466 LysR substrate binding domain HVY54_02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_02570 PF07869 Protein of unknown function (DUF1656) HVY54_02575 PF13533 Biotin-lipoyl like HVY54_02580 PF04632 Fusaric acid resistance protein family HVY54_02585 PF01337 Barstar (barnase inhibitor) HVY54_02590 PF07338 Protein of unknown function (DUF1471) HVY54_02595 PF01316 Arginine repressor, DNA binding domain HVY54_02595 PF02863 Arginine repressor, C-terminal domain HVY54_02600 PF00056 lactate/malate dehydrogenase, NAD binding domain HVY54_02600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HVY54_02605 PF13180 PDZ domain HVY54_02610 PF00595 PDZ domain HVY54_02610 PF13180 PDZ domain HVY54_02615 PF06295 Protein of unknown function (DUF1043) HVY54_02620 PF03969 AFG1-like ATPase HVY54_02625 PF00572 Ribosomal protein L13 HVY54_02630 PF00380 Ribosomal protein S9/S16 HVY54_02635 PF00043 Glutathione S-transferase, C-terminal domain HVY54_02635 PF02798 Glutathione S-transferase, N-terminal domain HVY54_02640 PF04386 Stringent starvation protein B HVY54_02645 PF03606 C4-dicarboxylate anaerobic carrier HVY54_02650 PF00392 Bacterial regulatory proteins, gntR family HVY54_02650 PF07729 FCD domain HVY54_02655 PF00701 Dihydrodipicolinate synthetase family HVY54_02660 PF07690 Major Facilitator Superfamily HVY54_02665 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HVY54_02670 PF00480 ROK family HVY54_02675 PF04074 YhcH/YjgK/YiaL HVY54_02680 PF17761 DUF1016 N-terminal domain HVY54_02680 PF06250 YhcG PDDEXK nuclease domain HVY54_02685 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_02685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVY54_02690 PF01645 Conserved region in glutamate synthase HVY54_02690 PF01493 GXGXG motif HVY54_02690 PF04898 Glutamate synthase central domain HVY54_02690 PF00310 Glutamine amidotransferases class-II HVY54_02695 PF16199 Radical_SAM C-terminal domain HVY54_02695 PF04055 Radical SAM superfamily HVY54_02700 PF00989 PAS fold HVY54_02700 PF00072 Response regulator receiver domain HVY54_02700 PF18415 Histidine kinase receptor ArcB trans-membrane domain HVY54_02700 PF00512 His Kinase A (phospho-acceptor) domain HVY54_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_02700 PF01627 Hpt domain HVY54_02710 PF00912 Transglycosylase HVY54_02715 PF10707 PhoP regulatory network protein YrbL HVY54_02720 PF00381 PTS HPr component phosphorylation site HVY54_02725 PF03668 P-loop ATPase protein family HVY54_02730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_02735 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HVY54_02740 PF04552 Sigma-54, DNA binding domain HVY54_02740 PF00309 Sigma-54 factor, Activator interacting domain (AID) HVY54_02740 PF04963 Sigma-54 factor, core binding domain HVY54_02745 PF12399 Branched-chain amino acid ATP-binding cassette transporter HVY54_02745 PF00005 ABC transporter HVY54_02750 PF03968 OstA-like protein HVY54_02755 PF06835 Lipopolysaccharide-assembly, LptC-related HVY54_02765 PF01380 SIS domain HVY54_02765 PF00571 CBS domain HVY54_02770 PF01699 Sodium/calcium exchanger protein HVY54_02775 PF00005 ABC transporter HVY54_02780 PF02405 Permease MlaE HVY54_02785 PF02470 MlaD protein HVY54_02790 PF05494 MlaC protein HVY54_02795 PF13466 STAS domain HVY54_02800 PF01722 BolA-like protein HVY54_02805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVY54_02810 PF13693 Winged helix-turn-helix DNA-binding HVY54_02815 PF00348 Polyprenyl synthetase HVY54_02820 PF00829 Ribosomal prokaryotic L21 protein HVY54_02825 PF01016 Ribosomal L27 protein HVY54_02830 PF00892 EamA-like transporter family HVY54_02835 PF01018 GTP1/OBG HVY54_02835 PF01926 50S ribosome-binding GTPase HVY54_02840 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HVY54_02845 PF03449 Transcription elongation factor, N-terminal HVY54_02845 PF01272 Transcription elongation factor, GreA/GreB, C-term HVY54_02850 PF01985 CRS1 / YhbY (CRM) domain HVY54_02855 PF01728 FtsJ-like methyltransferase HVY54_02860 PF06480 FtsH Extracellular HVY54_02860 PF17862 AAA+ lid domain HVY54_02860 PF00004 ATPase family associated with various cellular activities (AAA) HVY54_02860 PF01434 Peptidase family M41 HVY54_02865 PF00809 Pterin binding enzyme HVY54_02870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVY54_02870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVY54_02870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVY54_02870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVY54_02875 PF03840 Preprotein translocase SecG subunit HVY54_02885 PF00884 Sulfatase HVY54_02890 PF00764 Arginosuccinate synthase HVY54_02900 PF17384 RimP C-terminal SH3 domain HVY54_02900 PF02576 RimP N-terminal domain HVY54_02905 PF08529 NusA N-terminal domain HVY54_02905 PF00575 S1 RNA binding domain HVY54_02905 PF13184 NusA-like KH domain HVY54_02910 PF04760 Translation initiation factor IF-2, N-terminal region HVY54_02910 PF11987 Translation-initiation factor 2 HVY54_02910 PF00009 Elongation factor Tu GTP binding domain HVY54_02910 PF08364 Bacterial translation initiation factor IF-2 associated region HVY54_02915 PF02033 Ribosome-binding factor A HVY54_02920 PF01509 TruB family pseudouridylate synthase (N terminal domain) HVY54_02920 PF09157 Pseudouridine synthase II TruB, C-terminal HVY54_02920 PF16198 tRNA pseudouridylate synthase B C-terminal domain HVY54_02925 PF00312 Ribosomal protein S15 HVY54_02930 PF00575 S1 RNA binding domain HVY54_02930 PF00013 KH domain HVY54_02930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HVY54_02930 PF01138 3' exoribonuclease family, domain 1 HVY54_02930 PF03725 3' exoribonuclease family, domain 2 HVY54_02935 PF13181 Tetratricopeptide repeat HVY54_02935 PF07719 Tetratricopeptide repeat HVY54_02945 PF12343 Cold shock protein DEAD box A HVY54_02945 PF00271 Helicase conserved C-terminal domain HVY54_02945 PF03880 DbpA RNA binding domain HVY54_02945 PF00270 DEAD/DEAH box helicase HVY54_02950 PF03222 Tryptophan/tyrosine permease family HVY54_02955 PF00296 Luciferase-like monooxygenase HVY54_02960 PF01136 Peptidase family U32 HVY54_02965 PF01136 Peptidase family U32 HVY54_02970 PF02036 SCP-2 sterol transfer family HVY54_02975 PF13508 Acetyltransferase (GNAT) domain HVY54_02980 PF01541 GIY-YIG catalytic domain HVY54_02990 PF01965 DJ-1/PfpI family HVY54_02995 PF13460 NAD(P)H-binding HVY54_03000 PF03773 Predicted permease HVY54_03005 PF04972 BON domain HVY54_03010 PF13580 SIS domain HVY54_03015 PF02021 Uncharacterised protein family UPF0102 HVY54_03020 PF04348 LppC putative lipoprotein HVY54_03025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HVY54_03040 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HVY54_03045 PF03613 PTS system mannose/fructose/sorbose family IID component HVY54_03050 PF03609 PTS system sorbose-specific iic component HVY54_03055 PF03830 PTS system sorbose subfamily IIB component HVY54_03060 PF01116 Fructose-bisphosphate aldolase class-II HVY54_03065 PF01380 SIS domain HVY54_03070 PF01979 Amidohydrolase family HVY54_03075 PF03610 PTS system fructose IIA component HVY54_03080 PF03613 PTS system mannose/fructose/sorbose family IID component HVY54_03085 PF03609 PTS system sorbose-specific iic component HVY54_03090 PF03830 PTS system sorbose subfamily IIB component HVY54_03095 PF08013 Tagatose 6 phosphate kinase HVY54_03100 PF08220 DeoR-like helix-turn-helix domain HVY54_03100 PF00455 DeoR C terminal sensor domain HVY54_03110 PF15937 prlF antitoxin for toxin YhaV_toxin HVY54_03115 PF08666 SAF domain HVY54_03115 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HVY54_03120 PF07690 Major Facilitator Superfamily HVY54_03125 PF03328 HpcH/HpaI aldolase/citrate lyase family HVY54_03130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVY54_03130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HVY54_03135 PF02595 Glycerate kinase family HVY54_03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_03160 PF03466 LysR substrate binding domain HVY54_03165 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_03170 PF03222 Tryptophan/tyrosine permease family HVY54_03175 PF00871 Acetokinase family HVY54_03180 PF02901 Pyruvate formate lyase-like HVY54_03180 PF01228 Glycine radical HVY54_03185 PF01042 Endoribonuclease L-PSP HVY54_03190 PF03315 Serine dehydratase beta chain HVY54_03190 PF03313 Serine dehydratase alpha chain HVY54_03200 PF03313 Serine dehydratase alpha chain HVY54_03210 PF17954 Quercetinase C-terminal cupin domain HVY54_03210 PF02678 Pirin HVY54_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_03215 PF03466 LysR substrate binding domain HVY54_03220 PF05656 Protein of unknown function (DUF805) HVY54_03225 PF05656 Protein of unknown function (DUF805) HVY54_03230 PF13409 Glutathione S-transferase, N-terminal domain HVY54_03235 PF07681 DoxX HVY54_03240 PF13997 YqjK-like protein HVY54_03245 PF07332 Putative Actinobacterial Holin-X, holin superfamily III HVY54_03250 PF05957 Bacterial protein of unknown function (DUF883) HVY54_03255 PF06476 Protein of unknown function (DUF1090) HVY54_03260 PF13721 SecD export protein N-terminal TM region HVY54_03265 PF09335 SNARE associated Golgi protein HVY54_03270 PF07729 FCD domain HVY54_03270 PF00392 Bacterial regulatory proteins, gntR family HVY54_03275 PF07690 Major Facilitator Superfamily HVY54_03280 PF02614 Glucuronate isomerase HVY54_03285 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HVY54_03285 PF08666 SAF domain HVY54_03290 PF10688 Bacterial inner membrane protein HVY54_03295 PF00375 Sodium:dicarboxylate symporter family HVY54_03300 PF03741 Integral membrane protein TerC family HVY54_03305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVY54_03310 PF02698 DUF218 domain HVY54_03315 PF01863 Protein of unknown function DUF45 HVY54_03320 PF05175 Methyltransferase small domain HVY54_03325 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HVY54_03330 PF01381 Helix-turn-helix HVY54_03335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HVY54_03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_03340 PF01204 Trehalase HVY54_03350 PF13520 Amino acid permease HVY54_03355 PF04074 YhcH/YjgK/YiaL HVY54_03360 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HVY54_03360 PF16353 Domain of unknown function(DUF4981) HVY54_03360 PF02837 Glycosyl hydrolases family 2, sugar binding domain HVY54_03360 PF00703 Glycosyl hydrolases family 2 HVY54_03360 PF02929 Beta galactosidase small chain HVY54_03365 PF00356 Bacterial regulatory proteins, lacI family HVY54_03370 PF01588 Putative tRNA binding domain HVY54_03375 PF00202 Aminotransferase class-III HVY54_03380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVY54_03380 PF08447 PAS fold HVY54_03385 PF03551 Transcriptional regulator PadR-like family HVY54_03390 PF04954 Siderophore-interacting protein HVY54_03390 PF08021 Siderophore-interacting FAD-binding domain HVY54_03400 PF03167 Uracil DNA glycosylase superfamily HVY54_03405 PF04545 Sigma-70, region 4 HVY54_03405 PF04542 Sigma-70 region 2 HVY54_03405 PF04546 Sigma-70, non-essential region HVY54_03405 PF04539 Sigma-70 region 3 HVY54_03405 PF03979 Sigma-70 factor, region 1.1 HVY54_03405 PF00140 Sigma-70 factor, region 1.2 HVY54_03410 PF10410 DnaB-helicase binding domain of primase HVY54_03410 PF01807 CHC2 zinc finger HVY54_03410 PF08275 DNA primase catalytic core, N-terminal domain HVY54_03410 PF08278 DNA primase DnaG DnaB-binding HVY54_03415 PF01165 Ribosomal protein S21 HVY54_03420 PF00814 Glycoprotease family HVY54_03425 PF00939 Sodium:sulfate symporter transmembrane region HVY54_03430 PF05683 Fumarase C-terminus HVY54_03435 PF05681 Fumarate hydratase (Fumerase) HVY54_03440 PF03466 LysR substrate binding domain HVY54_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_03445 PF02660 Glycerol-3-phosphate acyltransferase HVY54_03450 PF02152 Dihydroneopterin aldolase HVY54_03455 PF02673 Bacitracin resistance protein BacA HVY54_03460 PF12627 Probable RNA and SrmB- binding site of polymerase A HVY54_03460 PF01743 Poly A polymerase head domain HVY54_03460 PF01966 HD domain HVY54_03465 PF08239 Bacterial SH3 domain HVY54_03470 PF01928 CYTH domain HVY54_03475 PF08335 GlnD PII-uridylyltransferase HVY54_03475 PF03710 Glutamate-ammonia ligase adenylyltransferase HVY54_03480 PF01467 Cytidylyltransferase-like HVY54_03480 PF00294 pfkB family carbohydrate kinase HVY54_03495 PF15975 Flotillin HVY54_03495 PF01145 SPFH domain / Band 7 family HVY54_03500 PF07290 Protein of unknown function (DUF1449) HVY54_03505 PF08971 Glycogen synthesis protein HVY54_03510 PF04380 Membrane fusogenic activity HVY54_03515 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HVY54_03525 PF02535 ZIP Zinc transporter HVY54_03530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HVY54_03535 PF03738 Glutathionylspermidine synthase preATP-grasp HVY54_03540 PF06693 Protein of unknown function (DUF1190) HVY54_03545 PF02321 Outer membrane efflux protein HVY54_03550 PF00293 NUDIX domain HVY54_03555 PF06853 Protein of unknown function (DUF1249) HVY54_03560 PF00149 Calcineurin-like phosphoesterase HVY54_03565 PF05728 Uncharacterised protein family (UPF0227) HVY54_03570 PF00204 DNA gyrase B HVY54_03570 PF01751 Toprim domain HVY54_03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_03570 PF00986 DNA gyrase B subunit, carboxyl terminus HVY54_03575 PF07715 TonB-dependent Receptor Plug Domain HVY54_03580 PF00005 ABC transporter HVY54_03585 PF01032 FecCD transport family HVY54_03590 PF01032 FecCD transport family HVY54_03600 PF01380 SIS domain HVY54_03600 PF01418 Helix-turn-helix domain, rpiR family HVY54_03605 PF03992 Antibiotic biosynthesis monooxygenase HVY54_03610 PF02525 Flavodoxin-like fold HVY54_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_03615 PF08521 Two-component sensor kinase N-terminal HVY54_03615 PF00512 His Kinase A (phospho-acceptor) domain HVY54_03620 PF00486 Transcriptional regulatory protein, C terminal HVY54_03620 PF00072 Response regulator receiver domain HVY54_03625 PF04076 Bacterial OB fold (BOF) protein HVY54_03630 PF06445 GyrI-like small molecule binding domain HVY54_03635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_03640 PF03989 DNA gyrase C-terminal domain, beta-propeller HVY54_03640 PF00521 DNA gyrase/topoisomerase IV, subunit A HVY54_03645 PF01553 Acyltransferase HVY54_03650 PF00394 Multicopper oxidase HVY54_03650 PF07732 Multicopper oxidase HVY54_03650 PF07731 Multicopper oxidase HVY54_03655 PF04055 Radical SAM superfamily HVY54_03655 PF08497 Radical SAM N-terminal HVY54_03655 PF11842 Domain of unknown function (DUF3362) HVY54_03660 PF04728 Lipoprotein leucine-zipper HVY54_03665 PF12883 Protein of unknown function (DUF3828) HVY54_03670 PF00248 Aldo/keto reductase family HVY54_03675 PF00465 Iron-containing alcohol dehydrogenase HVY54_03680 PF06719 AraC-type transcriptional regulator N-terminus HVY54_03680 PF12833 Helix-turn-helix domain HVY54_03685 PF09335 SNARE associated Golgi protein HVY54_03690 PF01053 Cys/Met metabolism PLP-dependent enzyme HVY54_03695 PF01618 MotA/TolQ/ExbB proton channel family HVY54_03700 PF02472 Biopolymer transport protein ExbD/TolR HVY54_03710 PF03350 Uncharacterized protein family, UPF0114 HVY54_03715 PF00248 Aldo/keto reductase family HVY54_03720 PF01738 Dienelactone hydrolase family HVY54_03725 PF11115 Protein of unknown function (DUF2623) HVY54_03730 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HVY54_03730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVY54_03735 PF13247 4Fe-4S dicluster domain HVY54_03740 PF03916 Polysulphide reductase, NrfD HVY54_03745 PF00374 Nickel-dependent hydrogenase HVY54_03750 PF01750 Hydrogenase maturation protease HVY54_03755 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE HVY54_03760 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HVY54_03765 PF01455 HupF/HypC family HVY54_03770 PF02798 Glutathione S-transferase, N-terminal domain HVY54_03775 PF03738 Glutathionylspermidine synthase preATP-grasp HVY54_03775 PF05257 CHAP domain HVY54_03780 PF01384 Phosphate transporter family HVY54_03800 PF01943 Polysaccharide biosynthesis protein HVY54_03810 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HVY54_03815 PF03739 Lipopolysaccharide export system permease LptF/LptG HVY54_03825 PF00155 Aminotransferase class I and II HVY54_03830 PF00550 Phosphopantetheine attachment site HVY54_03840 PF00501 AMP-binding enzyme HVY54_03840 PF14535 AMP-binding enzyme C-terminal domain HVY54_03850 PF07729 FCD domain HVY54_03850 PF00392 Bacterial regulatory proteins, gntR family HVY54_03855 PF01565 FAD binding domain HVY54_03855 PF02913 FAD linked oxidases, C-terminal domain HVY54_03860 PF01565 FAD binding domain HVY54_03865 PF13183 4Fe-4S dicluster domain HVY54_03865 PF02754 Cysteine-rich domain HVY54_03870 PF03928 Haem-degrading HVY54_03875 PF01274 Malate synthase HVY54_03880 PF02652 L-lactate permease HVY54_03905 PF04972 BON domain HVY54_03905 PF00263 Bacterial type II and III secretion system protein HVY54_03905 PF13629 Pilus formation protein N terminal region HVY54_03920 PF00437 Type II/IV secretion system protein HVY54_04015 PF04474 Protein of unknown function (DUF554) HVY54_04020 PF01276 Orn/Lys/Arg decarboxylase, major domain HVY54_04020 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVY54_04020 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVY54_04025 PF03825 Nucleoside H+ symporter HVY54_04030 PF01464 Transglycosylase SLT domain HVY54_04030 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HVY54_04035 PF04362 Bacterial Fe(2+) trafficking HVY54_04040 PF14815 NUDIX domain HVY54_04040 PF00730 HhH-GPD superfamily base excision DNA repair protein HVY54_04040 PF00633 Helix-hairpin-helix motif HVY54_04040 PF10576 Iron-sulfur binding domain of endonuclease III HVY54_04045 PF02390 Putative methyltransferase HVY54_04050 PF04320 Protein with unknown function (DUF469) HVY54_04055 PF11101 Protein of unknown function (DUF2884) HVY54_04060 PF17763 Glutaminase/Asparaginase C-terminal domain HVY54_04060 PF00710 Asparaginase, N-terminal HVY54_04065 PF06717 Protein of unknown function (DUF1202) HVY54_04070 PF04055 Radical SAM superfamily HVY54_04070 PF06969 HemN C-terminal domain HVY54_04075 PF01725 Ham1 family HVY54_04080 PF02594 Uncharacterised ACR, YggU family COG1872 HVY54_04085 PF02325 YGGT family HVY54_04090 PF01168 Alanine racemase, N-terminal domain HVY54_04095 PF00437 Type II/IV secretion system protein HVY54_04100 PF03652 Holliday junction resolvase HVY54_04105 PF02622 Uncharacterized ACR, COG1678 HVY54_04110 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HVY54_04110 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HVY54_04115 PF04452 RNA methyltransferase HVY54_04120 PF04231 Endonuclease I HVY54_04125 PF17283 SprT-like zinc ribbon domain HVY54_04125 PF10263 SprT-like family HVY54_04130 PF00083 Sugar (and other) transporter HVY54_04135 PF00438 S-adenosylmethionine synthetase, N-terminal domain HVY54_04135 PF02772 S-adenosylmethionine synthetase, central domain HVY54_04135 PF02773 S-adenosylmethionine synthetase, C-terminal domain HVY54_04140 PF17430 Uncharacterized YqgC-like HVY54_04145 PF11036 Virulence promoting factor HVY54_04150 PF17810 Arginine decarboxylase helical bundle domain HVY54_04150 PF17944 Arginine decarboxylase C-terminal helical extension HVY54_04150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HVY54_04160 PF00491 Arginase family HVY54_04165 PF01435 Peptidase family M48 HVY54_04170 PF02779 Transketolase, pyrimidine binding domain HVY54_04170 PF00456 Transketolase, thiamine diphosphate binding domain HVY54_04170 PF02780 Transketolase, C-terminal domain HVY54_04175 PF01145 SPFH domain / Band 7 family HVY54_04180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_04185 PF02378 Phosphotransferase system, EIIC HVY54_04185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_04190 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_04190 PF00107 Zinc-binding dehydrogenase HVY54_04195 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HVY54_04200 PF05068 Mannitol repressor HVY54_04210 PF00005 ABC transporter HVY54_04215 PF00005 ABC transporter HVY54_04235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HVY54_04235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HVY54_04240 PF00162 Phosphoglycerate kinase HVY54_04245 PF01116 Fructose-bisphosphate aldolase class-II HVY54_04250 PF05552 Conserved TM helix HVY54_04250 PF00924 Mechanosensitive ion channel HVY54_04265 PF01810 LysE type translocator HVY54_04270 PF04402 Protein of unknown function (DUF541) HVY54_04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_04275 PF03466 LysR substrate binding domain HVY54_04280 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HVY54_04280 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HVY54_04285 PF00378 Enoyl-CoA hydratase/isomerase HVY54_04295 PF01642 Methylmalonyl-CoA mutase HVY54_04295 PF02310 B12 binding domain HVY54_04300 PF03466 LysR substrate binding domain HVY54_04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_04305 PF03466 LysR substrate binding domain HVY54_04310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HVY54_04315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVY54_04315 PF01842 ACT domain HVY54_04315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVY54_04325 PF01812 5-formyltetrahydrofolate cyclo-ligase family HVY54_04335 PF05164 Cell division protein ZapA HVY54_04340 PF03695 Uncharacterised protein family (UPF0149) HVY54_04345 PF05195 Aminopeptidase P, N-terminal domain HVY54_04345 PF00557 Metallopeptidase family M24 HVY54_04350 PF01494 FAD binding domain HVY54_04355 PF01494 FAD binding domain HVY54_04365 PF01571 Aminomethyltransferase folate-binding domain HVY54_04365 PF08669 Glycine cleavage T-protein C-terminal barrel domain HVY54_04370 PF01597 Glycine cleavage H-protein HVY54_04375 PF02347 Glycine cleavage system P-protein HVY54_04380 PF00232 Glycosyl hydrolase family 1 HVY54_04390 PF03006 Haemolysin-III related HVY54_04395 PF01571 Aminomethyltransferase folate-binding domain HVY54_04400 PF03937 Flavinator of succinate dehydrogenase HVY54_04405 PF07254 Membrane-bound toxin component of toxin-antitoxin system HVY54_04410 PF00258 Flavodoxin HVY54_04415 PF02899 Phage integrase, N-terminal SAM-like domain HVY54_04415 PF00589 Phage integrase family HVY54_04420 PF10411 Disulfide bond isomerase protein N-terminus HVY54_04420 PF13098 Thioredoxin-like domain HVY54_04425 PF02272 DHHA1 domain HVY54_04425 PF01368 DHH family HVY54_04425 PF17768 RecJ OB domain HVY54_04435 PF00152 tRNA synthetases class II (D, K and N) HVY54_04435 PF01336 OB-fold nucleic acid binding domain HVY54_04440 PF00293 NUDIX domain HVY54_04455 PF00860 Permease family HVY54_04465 PF13247 4Fe-4S dicluster domain HVY54_04470 PF00860 Permease family HVY54_04475 PF01979 Amidohydrolase family HVY54_04480 PF00860 Permease family HVY54_04485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HVY54_04485 PF01799 [2Fe-2S] binding domain HVY54_04485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HVY54_04490 PF00941 FAD binding domain in molybdopterin dehydrogenase HVY54_04495 PF01979 Amidohydrolase family HVY54_04500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVY54_04500 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_04505 PF12804 MobA-like NTP transferase domain HVY54_04515 PF02625 XdhC and CoxI family HVY54_04515 PF13478 XdhC Rossmann domain HVY54_04520 PF00696 Amino acid kinase family HVY54_04525 PF01979 Amidohydrolase family HVY54_04530 PF01546 Peptidase family M20/M25/M40 HVY54_04530 PF07687 Peptidase dimerisation domain HVY54_04535 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_04540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVY54_04540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVY54_04550 PF01799 [2Fe-2S] binding domain HVY54_04550 PF00111 2Fe-2S iron-sulfur cluster binding domain HVY54_04555 PF00941 FAD binding domain in molybdopterin dehydrogenase HVY54_04555 PF03450 CO dehydrogenase flavoprotein C-terminal domain HVY54_04560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HVY54_04560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HVY54_04565 PF01551 Peptidase family M23 HVY54_04565 PF01476 LysM domain HVY54_04585 PF12833 Helix-turn-helix domain HVY54_04590 PF03958 Bacterial type II/III secretion system short domain HVY54_04590 PF00263 Bacterial type II and III secretion system protein HVY54_04595 PF07201 HrpJ-like domain HVY54_04600 PF00771 FHIPEP family HVY54_04605 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVY54_04605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVY54_04605 PF18269 T3SS EscN ATPase C-terminal domain HVY54_04620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVY54_04625 PF00813 FliP family HVY54_04630 PF01313 Bacterial export proteins, family 3 HVY54_04635 PF01311 Bacterial export proteins, family 1 HVY54_04640 PF01312 FlhB HrpN YscU SpaS Family HVY54_04645 PF01312 FlhB HrpN YscU SpaS Family HVY54_04660 PF09480 Type III secretion system protein PrgH-EprH (PrgH) HVY54_04665 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF HVY54_04675 PF01514 Secretory protein of YscJ/FliF family HVY54_04680 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) HVY54_04690 PF00196 Bacterial regulatory proteins, luxR family HVY54_04690 PF00072 Response regulator receiver domain HVY54_04695 PF01464 Transglycosylase SLT domain HVY54_04705 PF00486 Transcriptional regulatory protein, C terminal HVY54_04710 PF07720 Tetratricopeptide repeat HVY54_04735 PF00486 Transcriptional regulatory protein, C terminal HVY54_04740 PF00196 Bacterial regulatory proteins, luxR family HVY54_04745 PF03222 Tryptophan/tyrosine permease family HVY54_04750 PF02803 Thiolase, C-terminal domain HVY54_04750 PF00108 Thiolase, N-terminal domain HVY54_04755 PF04962 KduI/IolB family HVY54_04765 PF00083 Sugar (and other) transporter HVY54_04770 PF01177 Asp/Glu/Hydantoin racemase HVY54_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_04775 PF03466 LysR substrate binding domain HVY54_04780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HVY54_04780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HVY54_04785 PF00356 Bacterial regulatory proteins, lacI family HVY54_04790 PF01553 Acyltransferase HVY54_04790 PF00501 AMP-binding enzyme HVY54_04795 PF07690 Major Facilitator Superfamily HVY54_04800 PF00248 Aldo/keto reductase family HVY54_04805 PF06004 Bacterial protein of unknown function (DUF903) HVY54_04810 PF03741 Integral membrane protein TerC family HVY54_04815 PF02976 DNA mismatch repair enzyme MutH HVY54_04820 PF00293 NUDIX domain HVY54_04825 PF05524 PEP-utilising enzyme, N-terminal HVY54_04825 PF01590 GAF domain HVY54_04825 PF00391 PEP-utilising enzyme, mobile domain HVY54_04825 PF02896 PEP-utilising enzyme, TIM barrel domain HVY54_04830 PF01790 Prolipoprotein diacylglyceryl transferase HVY54_04835 PF00303 Thymidylate synthase HVY54_04840 PF07963 Prokaryotic N-terminal methylation motif HVY54_04845 PF07963 Prokaryotic N-terminal methylation motif HVY54_04850 PF10713 Protein of unknown function (DUF2509) HVY54_04855 PF07963 Prokaryotic N-terminal methylation motif HVY54_04855 PF12528 Type II secretion prepilin peptidase dependent protein C HVY54_04860 PF17946 RecC C-terminal domain HVY54_04865 PF00675 Insulinase (Peptidase family M16) HVY54_04865 PF05193 Peptidase M16 inactive domain HVY54_04865 PF16187 Middle or third domain of peptidase_M16 HVY54_04870 PF12705 PD-(D/E)XK nuclease superfamily HVY54_04870 PF13361 UvrD-like helicase C-terminal domain HVY54_04870 PF00580 UvrD/REP helicase N-terminal domain HVY54_04875 PF13538 UvrD-like helicase C-terminal domain HVY54_04880 PF00583 Acetyltransferase (GNAT) family HVY54_04880 PF00696 Amino acid kinase family HVY54_04885 PF01520 N-acetylmuramoyl-L-alanine amidase HVY54_04885 PF11741 AMIN domain HVY54_04905 PF06725 3D domain HVY54_04905 PF03562 MltA specific insert domain HVY54_04910 PF00899 ThiF family HVY54_04915 PF02657 Fe-S metabolism associated domain HVY54_04920 PF00266 Aminotransferase class-V HVY54_04925 PF06004 Bacterial protein of unknown function (DUF903) HVY54_04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_04930 PF03466 LysR substrate binding domain HVY54_04935 PF04241 Protein of unknown function (DUF423) HVY54_04940 PF18125 RlmM ferredoxin-like domain HVY54_04940 PF01728 FtsJ-like methyltransferase HVY54_04945 PF00455 DeoR C terminal sensor domain HVY54_04945 PF08220 DeoR-like helix-turn-helix domain HVY54_04950 PF05025 RbsD / FucU transport protein family HVY54_04955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVY54_04955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVY54_04960 PF02952 L-fucose isomerase, C-terminal domain HVY54_04960 PF07882 L-fucose isomerase, second N-terminal domain HVY54_04960 PF07881 L-fucose isomerase, first N-terminal domain HVY54_04965 PF07690 Major Facilitator Superfamily HVY54_04970 PF00596 Class II Aldolase and Adducin N-terminal domain HVY54_04975 PF00465 Iron-containing alcohol dehydrogenase HVY54_04980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HVY54_04980 PF01367 5'-3' exonuclease, C-terminal SAM fold HVY54_04985 PF03315 Serine dehydratase beta chain HVY54_04985 PF03313 Serine dehydratase alpha chain HVY54_04995 PF03641 Possible lysine decarboxylase HVY54_04995 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HVY54_04995 PF11892 Domain of unknown function (DUF3412) HVY54_05000 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HVY54_05000 PF14489 QueF-like protein HVY54_05005 PF07348 Syd protein (SUKH-2) HVY54_05010 PF04287 tRNA pseudouridine synthase C HVY54_05015 PF00849 RNA pseudouridylate synthase HVY54_05020 PF00258 Flavodoxin HVY54_05025 PF07690 Major Facilitator Superfamily HVY54_05030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVY54_05030 PF13378 Enolase C-terminal domain-like HVY54_05035 PF13378 Enolase C-terminal domain-like HVY54_05040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HVY54_05040 PF00072 Response regulator receiver domain HVY54_05040 PF01627 Hpt domain HVY54_05040 PF00512 His Kinase A (phospho-acceptor) domain HVY54_05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_05040 PF00672 HAMP domain HVY54_05045 PF01938 TRAM domain HVY54_05045 PF05958 tRNA (Uracil-5-)-methyltransferase HVY54_05050 PF13291 ACT domain HVY54_05050 PF04607 Region found in RelA / SpoT proteins HVY54_05050 PF02824 TGS domain HVY54_05055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HVY54_05060 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HVY54_05065 PF03819 MazG nucleotide pyrophosphohydrolase domain HVY54_05070 PF00117 Glutamine amidotransferase class-I HVY54_05070 PF06418 CTP synthase N-terminus HVY54_05075 PF00113 Enolase, C-terminal TIM barrel domain HVY54_05075 PF03952 Enolase, N-terminal domain HVY54_05080 PF04536 TPM domain HVY54_05090 PF04536 TPM domain HVY54_05100 PF04055 Radical SAM superfamily HVY54_05105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVY54_05105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVY54_05110 PF07690 Major Facilitator Superfamily HVY54_05120 PF01565 FAD binding domain HVY54_05120 PF02913 FAD linked oxidases, C-terminal domain HVY54_05125 PF00083 Sugar (and other) transporter HVY54_05130 PF01012 Electron transfer flavoprotein domain HVY54_05135 PF00766 Electron transfer flavoprotein FAD-binding domain HVY54_05135 PF01012 Electron transfer flavoprotein domain HVY54_05140 PF04309 Glycerol-3-phosphate responsive antiterminator HVY54_05150 PF01266 FAD dependent oxidoreductase HVY54_05155 PF01242 6-pyruvoyl tetrahydropterin synthase HVY54_05160 PF00175 Oxidoreductase NAD-binding domain HVY54_05160 PF00258 Flavodoxin HVY54_05160 PF00667 FAD binding domain HVY54_05165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HVY54_05165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HVY54_05170 PF01507 Phosphoadenosine phosphosulfate reductase family HVY54_05175 PF01848 Hok/gef family HVY54_05190 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) HVY54_05195 PF04389 Peptidase family M28 HVY54_05200 PF01507 Phosphoadenosine phosphosulfate reductase family HVY54_05205 PF00009 Elongation factor Tu GTP binding domain HVY54_05215 PF12084 Protein of unknown function (DUF3561) HVY54_05220 PF04977 Septum formation initiator HVY54_05225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HVY54_05230 PF02542 YgbB family HVY54_05235 PF01142 tRNA pseudouridine synthase D (TruD) HVY54_05240 PF01975 Survival protein SurE HVY54_05250 PF01551 Peptidase family M23 HVY54_05250 PF01476 LysM domain HVY54_05255 PF00140 Sigma-70 factor, region 1.2 HVY54_05255 PF04539 Sigma-70 region 3 HVY54_05255 PF04545 Sigma-70, region 4 HVY54_05255 PF04542 Sigma-70 region 2 HVY54_05260 PF01047 MarR family HVY54_05265 PF02441 Flavoprotein HVY54_05270 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HVY54_05280 PF00149 Calcineurin-like phosphoesterase HVY54_05285 PF01624 MutS domain I HVY54_05285 PF05188 MutS domain II HVY54_05285 PF05190 MutS family domain IV HVY54_05285 PF05192 MutS domain III HVY54_05285 PF00488 MutS domain V HVY54_05295 PF11756 Nitrous oxide-stimulated promoter HVY54_05300 PF01590 GAF domain HVY54_05300 PF00158 Sigma-54 interaction domain HVY54_05305 PF00586 AIR synthase related protein, N-terminal domain HVY54_05305 PF02769 AIR synthase related protein, C-terminal domain HVY54_05310 PF01924 Hydrogenase formation hypA family HVY54_05315 PF01455 HupF/HypC family HVY54_05320 PF02492 CobW/HypB/UreG, nucleotide-binding domain HVY54_05325 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HVY54_05330 PF11046 Transcriptional repressor of hyc and hyp operons HVY54_05335 PF13247 4Fe-4S dicluster domain HVY54_05340 PF00361 Proton-conducting membrane transporter HVY54_05345 PF00146 NADH dehydrogenase HVY54_05350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HVY54_05350 PF00374 Nickel-dependent hydrogenase HVY54_05350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HVY54_05355 PF12838 4Fe-4S dicluster domain HVY54_05360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVY54_05365 PF07450 Formate hydrogenlyase maturation protein HycH HVY54_05370 PF01750 Hydrogenase maturation protease HVY54_05380 PF01381 Helix-turn-helix HVY54_05385 PF00232 Glycosyl hydrolase family 1 HVY54_05390 PF00367 phosphotransferase system, EIIB HVY54_05390 PF02378 Phosphotransferase system, EIIC HVY54_05395 PF00356 Bacterial regulatory proteins, lacI family HVY54_05400 PF13247 4Fe-4S dicluster domain HVY54_05400 PF12800 4Fe-4S binding domain HVY54_05405 PF00708 Acylphosphatase HVY54_05405 PF17788 HypF Kae1-like domain HVY54_05405 PF01300 Telomere recombination HVY54_05405 PF07503 HypF finger HVY54_05410 PF18113 Rubredoxin binding C-terminal domain HVY54_05410 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_05415 PF00258 Flavodoxin HVY54_05415 PF00301 Rubredoxin HVY54_05415 PF00753 Metallo-beta-lactamase superfamily HVY54_05420 PF00158 Sigma-54 interaction domain HVY54_05420 PF01590 GAF domain HVY54_05425 PF01380 SIS domain HVY54_05425 PF00571 CBS domain HVY54_05430 PF00455 DeoR C terminal sensor domain HVY54_05430 PF08220 DeoR-like helix-turn-helix domain HVY54_05435 PF06923 Glucitol operon activator protein (GutM) HVY54_05440 PF00106 short chain dehydrogenase HVY54_05445 PF03829 PTS system glucitol/sorbitol-specific IIA component HVY54_05455 PF03608 PTS system enzyme II sorbitol-specific factor HVY54_05460 PF13406 Transglycosylase SLT domain HVY54_05465 PF02464 Competence-damaged protein HVY54_05470 PF00154 recA bacterial DNA recombination protein HVY54_05475 PF02631 RecX family HVY54_05480 PF01411 tRNA synthetases class II (A) HVY54_05480 PF02272 DHHA1 domain HVY54_05480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HVY54_05485 PF02599 Global regulator protein family HVY54_05515 PF13419 Haloacid dehalogenase-like hydrolase HVY54_05520 PF09335 SNARE associated Golgi protein HVY54_05525 PF04262 Glutamate-cysteine ligase HVY54_05530 PF02664 S-Ribosylhomocysteinase (LuxS) HVY54_05545 PF07690 Major Facilitator Superfamily HVY54_05550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_05550 PF00529 HlyD membrane-fusion protein of T1SS HVY54_05555 PF01047 MarR family HVY54_05560 PF05437 Branched-chain amino acid transport protein (AzlD) HVY54_05565 PF03591 AzlC protein HVY54_05570 PF07690 Major Facilitator Superfamily HVY54_05575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HVY54_05580 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_05585 PF00005 ABC transporter HVY54_05585 PF00571 CBS domain HVY54_05590 PF00268 Ribonucleotide reductase, small chain HVY54_05595 PF08343 Ribonucleotide reductase N-terminal HVY54_05595 PF00317 Ribonucleotide reductase, all-alpha domain HVY54_05595 PF02867 Ribonucleotide reductase, barrel domain HVY54_05600 PF07972 NrdI Flavodoxin like HVY54_05605 PF00462 Glutaredoxin HVY54_05610 PF02627 Carboxymuconolactone decarboxylase family HVY54_05615 PF00155 Aminotransferase class I and II HVY54_05615 PF00392 Bacterial regulatory proteins, gntR family HVY54_05620 PF05957 Bacterial protein of unknown function (DUF883) HVY54_05625 PF09400 Protein of unknown function (DUF2002) HVY54_05630 PF06610 L-alanine exporter HVY54_05635 PF00816 H-NS histone family HVY54_05640 PF11127 Protein of unknown function (DUF2892) HVY54_05640 PF00581 Rhodanese-like domain HVY54_05645 PF01022 Bacterial regulatory protein, arsR family HVY54_05650 PF01679 Proteolipid membrane potential modulator HVY54_05655 PF01476 LysM domain HVY54_05655 PF04972 BON domain HVY54_05660 PF00392 Bacterial regulatory proteins, gntR family HVY54_05660 PF07729 FCD domain HVY54_05665 PF00324 Amino acid permease HVY54_05670 PF00202 Aminotransferase class-III HVY54_05675 PF00171 Aldehyde dehydrogenase family HVY54_05680 PF01266 FAD dependent oxidoreductase HVY54_05685 PF08943 CsiD HVY54_05690 PF00128 Alpha amylase, catalytic domain HVY54_05700 PF17621 Family of unknown function (DUF5508) HVY54_05715 PF16168 Adhesin of bacterial autotransporter system, probable stalk HVY54_05715 PF03797 Autotransporter beta-domain HVY54_05715 PF03212 Pertactin HVY54_05810 PF17762 HTH domain found in ParB protein HVY54_05810 PF02195 ParB-like nuclease domain HVY54_05820 PF00589 Phage integrase family HVY54_05820 PF13356 Arm DNA-binding domain HVY54_05830 PF01668 SmpB protein HVY54_05835 PF03364 Polyketide cyclase / dehydrase and lipid transport HVY54_05840 PF03658 RnfH family Ubiquitin HVY54_05845 PF04355 SmpA / OmlA family HVY54_05850 PF02463 RecF/RecN/SMC N terminal domain HVY54_05855 PF01513 ATP-NAD kinase HVY54_05860 PF01025 GrpE HVY54_05865 PF03471 Transporter associated domain HVY54_05865 PF01595 Cyclin M transmembrane N-terminal domain HVY54_05865 PF00571 CBS domain HVY54_05870 PF01578 Cytochrome C assembly protein HVY54_05875 PF00448 SRP54-type protein, GTPase domain HVY54_05875 PF02978 Signal peptide binding domain HVY54_05875 PF02881 SRP54-type protein, helical bundle domain HVY54_05880 PF00886 Ribosomal protein S16 HVY54_05885 PF05239 PRC-barrel domain HVY54_05885 PF01782 RimM N-terminal domain HVY54_05890 PF01746 tRNA (Guanine-1)-methyltransferase HVY54_05895 PF01245 Ribosomal protein L19 HVY54_05900 PF00691 OmpA family HVY54_05905 PF00990 Diguanylate cyclase, GGDEF domain HVY54_05905 PF17152 Periplasmic sensor domain HVY54_05910 PF13689 YfiR/HmsC-like HVY54_05915 PF10973 Protein of unknown function (DUF2799) HVY54_05920 PF00793 DAHP synthetase I family HVY54_05925 PF01817 Chorismate mutase type II HVY54_05925 PF02153 Prephenate dehydrogenase HVY54_05930 PF01817 Chorismate mutase type II HVY54_05930 PF00800 Prephenate dehydratase HVY54_05940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HVY54_05945 PF13006 Insertion element 4 transposase N-terminal HVY54_05945 PF01609 Transposase DDE domain HVY54_05950 PF13525 Outer membrane lipoprotein HVY54_05955 PF01479 S4 domain HVY54_05955 PF00849 RNA pseudouridylate synthase HVY54_05965 PF10431 C-terminal, D2-small domain, of ClpB protein HVY54_05965 PF17871 AAA lid domain HVY54_05965 PF07724 AAA domain (Cdc48 subfamily) HVY54_05965 PF00004 ATPase family associated with various cellular activities (AAA) HVY54_05965 PF02861 Clp amino terminal domain, pathogenicity island component HVY54_05990 PF00083 Sugar (and other) transporter HVY54_05995 PF10043 Predicted periplasmic lipoprotein (DUF2279) HVY54_06000 PF13091 PLD-like domain HVY54_06005 PF13380 CoA binding domain HVY54_06005 PF13607 Succinyl-CoA ligase like flavodoxin domain HVY54_06005 PF00583 Acetyltransferase (GNAT) family HVY54_06015 PF00085 Thioredoxin HVY54_06020 PF08032 RNA 2'-O ribose methyltransferase substrate binding HVY54_06020 PF00588 SpoU rRNA Methylase family HVY54_06025 PF03167 Uracil DNA glycosylase superfamily HVY54_06030 PF01228 Glycine radical HVY54_06035 PF01810 LysE type translocator HVY54_06040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_06040 PF03466 LysR substrate binding domain HVY54_06045 PF00271 Helicase conserved C-terminal domain HVY54_06045 PF00270 DEAD/DEAH box helicase HVY54_06050 PF05175 Methyltransferase small domain HVY54_06055 PF02910 Fumarate reductase flavoprotein C-term HVY54_06055 PF00890 FAD binding domain HVY54_06065 PF08281 Sigma-70, region 4 HVY54_06065 PF04542 Sigma-70 region 2 HVY54_06070 PF03873 Anti sigma-E protein RseA, C-terminal domain HVY54_06070 PF03872 Anti sigma-E protein RseA, N-terminal domain HVY54_06075 PF03888 MucB/RseB N-terminal domain HVY54_06075 PF17188 MucB/RseB C-terminal domain HVY54_06085 PF00679 Elongation factor G C-terminus HVY54_06085 PF03144 Elongation factor Tu domain 2 HVY54_06085 PF06421 GTP-binding protein LepA C-terminus HVY54_06085 PF00009 Elongation factor Tu GTP binding domain HVY54_06090 PF10502 Signal peptidase, peptidase S26 HVY54_06095 PF00035 Double-stranded RNA binding motif HVY54_06095 PF14622 Ribonuclease-III-like HVY54_06100 PF01926 50S ribosome-binding GTPase HVY54_06100 PF07650 KH domain HVY54_06105 PF02565 Recombination protein O C terminal HVY54_06105 PF11967 Recombination protein O N terminal HVY54_06110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HVY54_06115 PF01648 4'-phosphopantetheinyl transferase superfamily HVY54_06125 PF12838 4Fe-4S dicluster domain HVY54_06130 PF01418 Helix-turn-helix domain, rpiR family HVY54_06130 PF01380 SIS domain HVY54_06140 PF14437 MafB19-like deaminase HVY54_06145 PF01464 Transglycosylase SLT domain HVY54_06145 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_06150 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HVY54_06150 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HVY54_06150 PF02769 AIR synthase related protein, C-terminal domain HVY54_06155 PF00512 His Kinase A (phospho-acceptor) domain HVY54_06155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_06160 PF13942 YfhG lipoprotein HVY54_06165 PF00072 Response regulator receiver domain HVY54_06165 PF00158 Sigma-54 interaction domain HVY54_06170 PF00543 Nitrogen regulatory protein P-II HVY54_06175 PF00175 Oxidoreductase NAD-binding domain HVY54_06175 PF00970 Oxidoreductase FAD-binding domain HVY54_06175 PF00042 Globin HVY54_06180 PF00464 Serine hydroxymethyltransferase HVY54_06185 PF00480 ROK family HVY54_06190 PF13181 Tetratricopeptide repeat HVY54_06190 PF17128 Domain of unknown function (DUF5107) HVY54_06195 PF13407 Periplasmic binding protein domain HVY54_06200 PF00005 ABC transporter HVY54_06205 PF02653 Branched-chain amino acid transport system / permease component HVY54_06210 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_06210 PF00107 Zinc-binding dehydrogenase HVY54_06215 PF01263 Aldose 1-epimerase HVY54_06220 PF07681 DoxX HVY54_06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_06225 PF14759 Reductase C-terminal HVY54_06230 PF00106 short chain dehydrogenase HVY54_06235 PF00355 Rieske [2Fe-2S] domain HVY54_06240 PF00866 Ring hydroxylating beta subunit HVY54_06245 PF00355 Rieske [2Fe-2S] domain HVY54_06245 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HVY54_06250 PF03466 LysR substrate binding domain HVY54_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_06255 PF12832 MFS_1 like family HVY54_06260 PF00874 PRD domain HVY54_06265 PF12146 Serine aminopeptidase, S33 HVY54_06270 PF00459 Inositol monophosphatase family HVY54_06275 PF00588 SpoU rRNA Methylase family HVY54_06280 PF02082 Transcriptional regulator HVY54_06285 PF00266 Aminotransferase class-V HVY54_06290 PF01592 NifU-like N terminal domain HVY54_06295 PF01521 Iron-sulphur cluster biosynthesis HVY54_06300 PF07743 HSCB C-terminal oligomerisation domain HVY54_06305 PF00012 Hsp70 protein HVY54_06310 PF00111 2Fe-2S iron-sulfur cluster binding domain HVY54_06315 PF04384 Iron-sulphur cluster assembly HVY54_06320 PF00883 Cytosol aminopeptidase family, catalytic domain HVY54_06320 PF12404 Peptidase HVY54_06325 PF14581 SseB protein C-terminal domain HVY54_06325 PF07179 SseB protein N-terminal domain HVY54_06335 PF00581 Rhodanese-like domain HVY54_06340 PF00207 Alpha-2-macroglobulin family HVY54_06340 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HVY54_06340 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HVY54_06340 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HVY54_06340 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HVY54_06340 PF17962 Bacterial macroglobulin domain 6 HVY54_06340 PF07703 Alpha-2-macroglobulin bait region domain HVY54_06340 PF07678 A-macroglobulin TED domain HVY54_06340 PF01835 MG2 domain HVY54_06345 PF00905 Penicillin binding protein transpeptidase domain HVY54_06345 PF06832 Penicillin-Binding Protein C-terminus Family HVY54_06345 PF00912 Transglycosylase HVY54_06350 PF00334 Nucleoside diphosphate kinase HVY54_06355 PF04055 Radical SAM superfamily HVY54_06360 PF13464 Domain of unknown function (DUF4115) HVY54_06365 PF04551 GcpE protein HVY54_06370 PF03129 Anticodon binding domain HVY54_06370 PF13393 Histidyl-tRNA synthetase HVY54_06375 PF09976 Tetratricopeptide repeat-like domain HVY54_06380 PF13360 PQQ-like domain HVY54_06385 PF01926 50S ribosome-binding GTPase HVY54_06385 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HVY54_06390 PF07191 zinc-ribbons HVY54_06405 PF13742 OB-fold nucleic acid binding domain HVY54_06405 PF02601 Exonuclease VII, large subunit HVY54_06410 PF00571 CBS domain HVY54_06410 PF00478 IMP dehydrogenase / GMP reductase domain HVY54_06415 PF00958 GMP synthase C terminal domain HVY54_06415 PF02540 NAD synthase HVY54_06415 PF00117 Glutamine amidotransferase class-I HVY54_06450 PF06630 Enterobacterial exodeoxyribonuclease VIII HVY54_06450 PF12684 PDDEXK-like domain of unknown function (DUF3799) HVY54_06525 PF03592 Terminase small subunit HVY54_06525 PF10668 Phage terminase small subunit HVY54_06665 PF00182 Chitinase class I HVY54_06675 PF17358 Family of unknown function (DUF5384) HVY54_06680 PF05433 Glycine zipper 2TM domain HVY54_06685 PF11119 Protein of unknown function (DUF2633) HVY54_06695 PF00563 EAL domain HVY54_06695 PF05231 MASE1 HVY54_06700 PF02541 Ppx/GppA phosphatase family HVY54_06705 PF02503 Polyphosphate kinase middle domain HVY54_06705 PF17941 Polyphosphate kinase C-terminal domain 1 HVY54_06705 PF13090 Polyphosphate kinase C-terminal domain 2 HVY54_06705 PF13089 Polyphosphate kinase N-terminal domain HVY54_06710 PF00551 Formyl transferase HVY54_06715 PF00586 AIR synthase related protein, N-terminal domain HVY54_06715 PF02769 AIR synthase related protein, C-terminal domain HVY54_06725 PF00860 Permease family HVY54_06730 PF00308 Bacterial dnaA protein HVY54_06735 PF03960 ArsC family HVY54_06740 PF01435 Peptidase family M48 HVY54_06745 PF01594 AI-2E family transporter HVY54_06750 PF01226 Formate/nitrite transporter HVY54_06755 PF01590 GAF domain HVY54_06755 PF00158 Sigma-54 interaction domain HVY54_06760 PF07450 Formate hydrogenlyase maturation protein HycH HVY54_06765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVY54_06770 PF12838 4Fe-4S dicluster domain HVY54_06775 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HVY54_06775 PF00374 Nickel-dependent hydrogenase HVY54_06775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HVY54_06780 PF00361 Proton-conducting membrane transporter HVY54_06780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HVY54_06785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HVY54_06790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HVY54_06790 PF00361 Proton-conducting membrane transporter HVY54_06795 PF00146 NADH dehydrogenase HVY54_06800 PF00361 Proton-conducting membrane transporter HVY54_06805 PF00037 4Fe-4S binding domain HVY54_06805 PF12798 4Fe-4S binding domain HVY54_06810 PF00578 AhpC/TSA family HVY54_06815 PF01842 ACT domain HVY54_06820 PF00701 Dihydrodipicolinate synthetase family HVY54_06825 PF06804 NlpB/DapX lipoprotein HVY54_06830 PF01259 SAICAR synthetase HVY54_06835 PF04228 Putative neutral zinc metallopeptidase HVY54_06840 PF05127 Helicase HVY54_06840 PF17176 tRNA-binding domain HVY54_06840 PF08351 Domain of unknown function (DUF1726) HVY54_06840 PF13718 GNAT acetyltransferase 2 HVY54_06845 PF02230 Phospholipase/Carboxylesterase HVY54_06850 PF13980 Uncharacterised protein family (UPF0370) HVY54_06855 PF01546 Peptidase family M20/M25/M40 HVY54_06855 PF07687 Peptidase dimerisation domain HVY54_06860 PF03960 ArsC family HVY54_06870 PF00873 AcrB/AcrD/AcrF family HVY54_06875 PF00672 HAMP domain HVY54_06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_06875 PF07730 Histidine kinase HVY54_06875 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HVY54_06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_06880 PF13247 4Fe-4S dicluster domain HVY54_06880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVY54_06885 PF00293 NUDIX domain HVY54_06890 PF06674 Protein of unknown function (DUF1176) HVY54_06895 PF02779 Transketolase, pyrimidine binding domain HVY54_06895 PF02780 Transketolase, C-terminal domain HVY54_06895 PF00456 Transketolase, thiamine diphosphate binding domain HVY54_06900 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVY54_06905 PF01515 Phosphate acetyl/butaryl transferase HVY54_06905 PF03949 Malic enzyme, NAD binding domain HVY54_06905 PF00390 Malic enzyme, N-terminal domain HVY54_06910 PF00936 BMC domain HVY54_06915 PF10662 Ethanolamine utilisation - propanediol utilisation HVY54_06920 PF06249 Ethanolamine utilisation protein EutQ HVY54_06925 PF01923 Cobalamin adenosyltransferase HVY54_06930 PF01515 Phosphate acetyl/butaryl transferase HVY54_06935 PF00936 BMC domain HVY54_06940 PF03319 Ethanolamine utilisation protein EutN/carboxysome HVY54_06945 PF00171 Aldehyde dehydrogenase family HVY54_06955 PF00465 Iron-containing alcohol dehydrogenase HVY54_06960 PF04346 Ethanolamine utilisation protein, EutH HVY54_06965 PF06277 Ethanolamine utilisation protein EutA HVY54_06970 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HVY54_06975 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HVY54_06980 PF00936 BMC domain HVY54_06985 PF00936 BMC domain HVY54_06985 PF16365 Ethanolamine utilization protein EutK C-terminus HVY54_06990 PF12833 Helix-turn-helix domain HVY54_06995 PF01218 Coproporphyrinogen III oxidase HVY54_07000 PF01520 N-acetylmuramoyl-L-alanine amidase HVY54_07005 PF00583 Acetyltransferase (GNAT) family HVY54_07010 PF11143 Protein of unknown function (DUF2919) HVY54_07015 PF06572 Protein of unknown function (DUF1131) HVY54_07020 PF04261 Dyp-type peroxidase family HVY54_07025 PF00144 Beta-lactamase HVY54_07030 PF00367 phosphotransferase system, EIIB HVY54_07030 PF02378 Phosphotransferase system, EIIC HVY54_07035 PF01380 SIS domain HVY54_07040 PF01380 SIS domain HVY54_07040 PF01418 Helix-turn-helix domain, rpiR family HVY54_07055 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_07060 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_07065 PF00005 ABC transporter HVY54_07070 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_07075 PF17263 Family of unknown function (DUF5329) HVY54_07080 PF08543 Phosphomethylpyrimidine kinase HVY54_07085 PF13006 Insertion element 4 transposase N-terminal HVY54_07085 PF01609 Transposase DDE domain HVY54_07090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HVY54_07095 PF02896 PEP-utilising enzyme, TIM barrel domain HVY54_07095 PF00391 PEP-utilising enzyme, mobile domain HVY54_07095 PF05524 PEP-utilising enzyme, N-terminal HVY54_07100 PF00381 PTS HPr component phosphorylation site HVY54_07105 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_07115 PF04354 ZipA, C-terminal FtsZ-binding domain HVY54_07120 PF00533 BRCA1 C Terminus (BRCT) domain HVY54_07120 PF01653 NAD-dependent DNA ligase adenylation domain HVY54_07120 PF12826 Helix-hairpin-helix motif HVY54_07120 PF03120 NAD-dependent DNA ligase OB-fold domain HVY54_07120 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HVY54_07125 PF12843 Putative quorum-sensing-regulated virulence factor HVY54_07130 PF13593 SBF-like CPA transporter family (DUF4137) HVY54_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_07135 PF03466 LysR substrate binding domain HVY54_07165 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVY54_07170 PF07037 Putative transcription regulator (DUF1323) HVY54_07175 PF07037 Putative transcription regulator (DUF1323) HVY54_07190 PF05231 MASE1 HVY54_07190 PF00563 EAL domain HVY54_07195 PF01773 Na+ dependent nucleoside transporter N-terminus HVY54_07195 PF07662 Na+ dependent nucleoside transporter C-terminus HVY54_07195 PF07670 Nucleoside recognition HVY54_07200 PF01566 Natural resistance-associated macrophage protein HVY54_07205 PF10697 Protein of unknown function (DUF2502) HVY54_07210 PF00654 Voltage gated chloride channel HVY54_07215 PF02685 Glucokinase HVY54_07220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_07225 PF02378 Phosphotransferase system, EIIC HVY54_07230 PF01321 Creatinase/Prolidase N-terminal domain HVY54_07230 PF00557 Metallopeptidase family M24 HVY54_07235 PF05343 M42 glutamyl aminopeptidase HVY54_07240 PF00381 PTS HPr component phosphorylation site HVY54_07240 PF02896 PEP-utilising enzyme, TIM barrel domain HVY54_07240 PF00391 PEP-utilising enzyme, mobile domain HVY54_07240 PF05524 PEP-utilising enzyme, N-terminal HVY54_07240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_07245 PF12833 Helix-turn-helix domain HVY54_07250 PF00072 Response regulator receiver domain HVY54_07250 PF04397 LytTr DNA-binding domain HVY54_07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_07255 PF06580 Histidine kinase HVY54_07255 PF07694 5TMR of 5TMR-LYT HVY54_07260 PF00155 Aminotransferase class I and II HVY54_07270 PF03279 Bacterial lipid A biosynthesis acyltransferase HVY54_07275 PF10810 Protein of unknown function (DUF2545) HVY54_07285 PF10938 YfdX protein HVY54_07290 PF02515 CoA-transferase family III HVY54_07295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_07295 PF00205 Thiamine pyrophosphate enzyme, central domain HVY54_07295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVY54_07300 PF03547 Membrane transport protein HVY54_07305 PF02515 CoA-transferase family III HVY54_07310 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_07310 PF00072 Response regulator receiver domain HVY54_07310 PF00512 His Kinase A (phospho-acceptor) domain HVY54_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_07315 PF00196 Bacterial regulatory proteins, luxR family HVY54_07315 PF00072 Response regulator receiver domain HVY54_07320 PF00529 HlyD membrane-fusion protein of T1SS HVY54_07320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_07325 PF07690 Major Facilitator Superfamily HVY54_07330 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_07340 PF00356 Bacterial regulatory proteins, lacI family HVY54_07340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVY54_07345 PF00251 Glycosyl hydrolases family 32 N-terminal domain HVY54_07345 PF08244 Glycosyl hydrolases family 32 C terminal HVY54_07350 PF00294 pfkB family carbohydrate kinase HVY54_07355 PF01306 LacY proton/sugar symporter HVY54_07370 PF01226 Formate/nitrite transporter HVY54_07375 PF04333 MlaA lipoprotein HVY54_07385 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HVY54_07390 PF04175 Protein of unknown function (DUF406) HVY54_07395 PF02803 Thiolase, C-terminal domain HVY54_07395 PF00108 Thiolase, N-terminal domain HVY54_07400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HVY54_07400 PF00378 Enoyl-CoA hydratase/isomerase HVY54_07400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HVY54_07405 PF00300 Histidine phosphatase superfamily (branch 1) HVY54_07410 PF00419 Fimbrial protein HVY54_07415 PF13953 PapC C-terminal domain HVY54_07415 PF13954 PapC N-terminal domain HVY54_07415 PF00577 Outer membrane usher protein HVY54_07420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_07420 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_07425 PF00419 Fimbrial protein HVY54_07430 PF00419 Fimbrial protein HVY54_07435 PF00419 Fimbrial protein HVY54_07440 PF11245 Protein of unknown function (DUF2544) HVY54_07445 PF01713 Smr domain HVY54_07450 PF05175 Methyltransferase small domain HVY54_07455 PF01264 Chorismate synthase HVY54_07460 PF03411 Penicillin-insensitive murein endopeptidase HVY54_07465 PF01925 Sulfite exporter TauE/SafE HVY54_07470 PF04315 Elongation factor P hydroxylase HVY54_07475 PF08891 YfcL protein HVY54_07480 PF01266 FAD dependent oxidoreductase HVY54_07480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HVY54_07485 PF02801 Beta-ketoacyl synthase, C-terminal domain HVY54_07485 PF00109 Beta-ketoacyl synthase, N-terminal domain HVY54_07490 PF07690 Major Facilitator Superfamily HVY54_07500 PF05154 TM2 domain HVY54_07525 PF04984 Phage tail sheath protein subtilisin-like domain HVY54_07525 PF17482 Phage tail sheath C-terminal domain HVY54_07555 PF00239 Resolvase, N terminal domain HVY54_07555 PF02796 Helix-turn-helix domain of resolvase HVY54_07560 PF07484 Phage Tail Collar Domain HVY54_07565 PF07484 Phage Tail Collar Domain HVY54_07570 PF07484 Phage Tail Collar Domain HVY54_07575 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVY54_07580 PF07484 Phage Tail Collar Domain HVY54_07600 PF06406 StbA protein HVY54_07605 PF05840 Bacteriophage replication gene A protein (GPA) HVY54_07675 PF02899 Phage integrase, N-terminal SAM-like domain HVY54_07675 PF00589 Phage integrase family HVY54_07680 PF11890 Domain of unknown function (DUF3410) HVY54_07680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVY54_07680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVY54_07685 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVY54_07685 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVY54_07690 PF01416 tRNA pseudouridine synthase HVY54_07695 PF09335 SNARE associated Golgi protein HVY54_07700 PF17848 Acetyl-coA carboxylase zinc finger domain HVY54_07700 PF01039 Carboxyl transferase domain HVY54_07705 PF02875 Mur ligase family, glutamate ligase domain HVY54_07705 PF08245 Mur ligase middle domain HVY54_07710 PF05036 Sporulation related domain HVY54_07715 PF02674 Colicin V production protein HVY54_07720 PF00156 Phosphoribosyl transferase domain HVY54_07725 PF02441 Flavoprotein HVY54_07730 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_07740 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_07745 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_07750 PF00005 ABC transporter HVY54_07755 PF04754 Putative transposase, YhgA-like HVY54_07760 PF08338 Domain of unknown function (DUF1731) HVY54_07760 PF01370 NAD dependent epimerase/dehydratase family HVY54_07765 PF02152 Dihydroneopterin aldolase HVY54_07770 PF00043 Glutathione S-transferase, C-terminal domain HVY54_07770 PF02798 Glutathione S-transferase, N-terminal domain HVY54_07775 PF02798 Glutathione S-transferase, N-terminal domain HVY54_07775 PF14834 Glutathione S-transferase, C-terminal domain HVY54_07780 PF12850 Calcineurin-like phosphoesterase superfamily domain HVY54_07785 PF00293 NUDIX domain HVY54_07790 PF03606 C4-dicarboxylate anaerobic carrier HVY54_07795 PF01515 Phosphate acetyl/butaryl transferase HVY54_07795 PF07085 DRTGG domain HVY54_07800 PF00871 Acetokinase family HVY54_07805 PF04217 Protein of unknown function, DUF412 HVY54_07810 PF03887 YfbU domain HVY54_07815 PF13419 Haloacid dehalogenase-like hydrolase HVY54_07820 PF02080 TrkA-C domain HVY54_07820 PF03600 Citrate transporter HVY54_07830 PF00155 Aminotransferase class I and II HVY54_07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_07835 PF03466 LysR substrate binding domain HVY54_07840 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HVY54_07845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVY54_07850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HVY54_07850 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HVY54_07860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HVY54_07860 PF10531 SLBB domain HVY54_07860 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HVY54_07865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HVY54_07865 PF01568 Molydopterin dinucleotide binding domain HVY54_07865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVY54_07865 PF00384 Molybdopterin oxidoreductase HVY54_07870 PF00146 NADH dehydrogenase HVY54_07875 PF12838 4Fe-4S dicluster domain HVY54_07880 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HVY54_07885 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HVY54_07890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HVY54_07890 PF00361 Proton-conducting membrane transporter HVY54_07895 PF00361 Proton-conducting membrane transporter HVY54_07900 PF00361 Proton-conducting membrane transporter HVY54_07905 PF08974 Domain of unknown function (DUF1877) HVY54_07915 PF02902 Ulp1 protease family, C-terminal catalytic domain HVY54_07920 PF12706 Beta-lactamase superfamily domain HVY54_07925 PF13673 Acetyltransferase (GNAT) domain HVY54_07930 PF05957 Bacterial protein of unknown function (DUF883) HVY54_07935 PF00425 chorismate binding enzyme HVY54_07940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVY54_07940 PF16582 Middle domain of thiamine pyrophosphate HVY54_07940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_07945 PF12697 Alpha/beta hydrolase family HVY54_07950 PF00378 Enoyl-CoA hydratase/isomerase HVY54_07955 PF13378 Enolase C-terminal domain-like HVY54_07960 PF00501 AMP-binding enzyme HVY54_07960 PF13193 AMP-binding enzyme C-terminal domain HVY54_07975 PF00892 EamA-like transporter family HVY54_07980 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HVY54_07985 PF01522 Polysaccharide deacetylase HVY54_07990 PF01370 NAD dependent epimerase/dehydratase family HVY54_07990 PF02911 Formyl transferase, C-terminal domain HVY54_07990 PF00551 Formyl transferase HVY54_07995 PF00535 Glycosyl transferase family 2 HVY54_08000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HVY54_08005 PF00300 Histidine phosphatase superfamily (branch 1) HVY54_08010 PF00293 NUDIX domain HVY54_08015 PF07437 YfaZ precursor HVY54_08020 PF00994 Probable molybdopterin binding domain HVY54_08025 PF09339 IclR helix-turn-helix domain HVY54_08025 PF01614 Bacterial transcriptional regulator HVY54_08030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVY54_08030 PF13378 Enolase C-terminal domain-like HVY54_08035 PF07690 Major Facilitator Superfamily HVY54_08040 PF03328 HpcH/HpaI aldolase/citrate lyase family HVY54_08050 PF04754 Putative transposase, YhgA-like HVY54_08055 PF02754 Cysteine-rich domain HVY54_08055 PF13183 4Fe-4S dicluster domain HVY54_08060 PF00890 FAD binding domain HVY54_08065 PF04324 BFD-like [2Fe-2S] binding domain HVY54_08065 PF01266 FAD dependent oxidoreductase HVY54_08070 PF07690 Major Facilitator Superfamily HVY54_08075 PF03009 Glycerophosphoryl diester phosphodiesterase family HVY54_08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_08080 PF03466 LysR substrate binding domain HVY54_08085 PF07690 Major Facilitator Superfamily HVY54_08095 PF00111 2Fe-2S iron-sulfur cluster binding domain HVY54_08100 PF00268 Ribonucleotide reductase, small chain HVY54_08105 PF03477 ATP cone domain HVY54_08105 PF02867 Ribonucleotide reductase, barrel domain HVY54_08105 PF00317 Ribonucleotide reductase, all-alpha domain HVY54_08110 PF12951 Passenger-associated-transport-repeat HVY54_08110 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat HVY54_08110 PF03797 Autotransporter beta-domain HVY54_08120 PF00521 DNA gyrase/topoisomerase IV, subunit A HVY54_08120 PF03989 DNA gyrase C-terminal domain, beta-propeller HVY54_08125 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) HVY54_08130 PF06672 Protein of unknown function (DUF1175) HVY54_08135 PF00207 Alpha-2-macroglobulin family HVY54_08135 PF01835 MG2 domain HVY54_08135 PF07703 Alpha-2-macroglobulin bait region domain HVY54_08140 PF10062 Predicted secreted protein (DUF2300) HVY54_08140 PF08486 Stage II sporulation protein HVY54_08145 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) HVY54_08150 PF02803 Thiolase, C-terminal domain HVY54_08150 PF00108 Thiolase, N-terminal domain HVY54_08155 PF02667 Short chain fatty acid transporter HVY54_08160 PF01144 Coenzyme A transferase HVY54_08165 PF01144 Coenzyme A transferase HVY54_08170 PF00158 Sigma-54 interaction domain HVY54_08170 PF02954 Bacterial regulatory protein, Fis family HVY54_08170 PF00072 Response regulator receiver domain HVY54_08175 PF00989 PAS fold HVY54_08175 PF00512 His Kinase A (phospho-acceptor) domain HVY54_08175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_08180 PF00072 Response regulator receiver domain HVY54_08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_08180 PF00512 His Kinase A (phospho-acceptor) domain HVY54_08180 PF09456 RcsC Alpha-Beta-Loop (ABL) HVY54_08185 PF00072 Response regulator receiver domain HVY54_08185 PF00196 Bacterial regulatory proteins, luxR family HVY54_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_08190 PF16359 RcsD-ABL domain HVY54_08190 PF01627 Hpt domain HVY54_08195 PF00267 Gram-negative porin HVY54_08200 PF02424 ApbE family HVY54_08205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HVY54_08205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HVY54_08205 PF02805 Metal binding domain of Ada HVY54_08205 PF12833 Helix-turn-helix domain HVY54_08210 PF13532 2OG-Fe(II) oxygenase superfamily HVY54_08215 PF00005 ABC transporter HVY54_08220 PF06039 Malate:quinone oxidoreductase (Mqo) HVY54_08225 PF03974 Ecotin HVY54_08235 PF12800 4Fe-4S binding domain HVY54_08235 PF00037 4Fe-4S binding domain HVY54_08235 PF13187 4Fe-4S dicluster domain HVY54_08240 PF03927 NapD protein HVY54_08245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVY54_08245 PF00384 Molybdopterin oxidoreductase HVY54_08245 PF01568 Molydopterin dinucleotide binding domain HVY54_08250 PF12800 4Fe-4S binding domain HVY54_08250 PF12838 4Fe-4S dicluster domain HVY54_08255 PF13237 4Fe-4S dicluster domain HVY54_08255 PF12801 4Fe-4S binding domain HVY54_08260 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HVY54_08265 PF03264 NapC/NirT cytochrome c family, N-terminal region HVY54_08270 PF00005 ABC transporter HVY54_08275 PF03379 CcmB protein HVY54_08280 PF01578 Cytochrome C assembly protein HVY54_08285 PF04995 Heme exporter protein D (CcmD) HVY54_08290 PF03100 CcmE HVY54_08295 PF01578 Cytochrome C assembly protein HVY54_08295 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HVY54_08300 PF08534 Redoxin HVY54_08305 PF03918 Cytochrome C biogenesis protein HVY54_08310 PF00196 Bacterial regulatory proteins, luxR family HVY54_08310 PF00072 Response regulator receiver domain HVY54_08315 PF16168 Adhesin of bacterial autotransporter system, probable stalk HVY54_08315 PF03797 Autotransporter beta-domain HVY54_08315 PF03212 Pertactin HVY54_08325 PF00884 Sulfatase HVY54_08325 PF11893 Domain of unknown function (DUF3413) HVY54_08330 PF07208 Protein of unknown function (DUF1414) HVY54_08335 PF04245 37-kD nucleoid-associated bacterial protein HVY54_08340 PF01386 Ribosomal L25p family HVY54_08345 PF04851 Type III restriction enzyme, res subunit HVY54_08345 PF00271 Helicase conserved C-terminal domain HVY54_08350 PF00849 RNA pseudouridylate synthase HVY54_08350 PF01479 S4 domain HVY54_08355 PF07690 Major Facilitator Superfamily HVY54_08360 PF13989 YejG-like protein HVY54_08365 PF00005 ABC transporter HVY54_08365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_08370 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_08370 PF12911 N-terminal TM domain of oligopeptide transport permease C HVY54_08375 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_08380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_08385 PF00563 EAL domain HVY54_08385 PF12792 CSS motif domain associated with EAL HVY54_08390 PF00877 NlpC/P60 family HVY54_08395 PF01569 PAP2 superfamily HVY54_08400 PF07683 Cobalamin synthesis protein cobW C-terminal domain HVY54_08400 PF02492 CobW/HypB/UreG, nucleotide-binding domain HVY54_08405 PF01232 Mannitol dehydrogenase Rossmann domain HVY54_08405 PF08125 Mannitol dehydrogenase C-terminal domain HVY54_08410 PF08207 Elongation factor P (EF-P) KOW-like domain HVY54_08410 PF09285 Elongation factor P, C-terminal HVY54_08410 PF01132 Elongation factor P (EF-P) OB domain HVY54_08415 PF03692 Putative zinc- or iron-chelating domain HVY54_08420 PF07690 Major Facilitator Superfamily HVY54_08425 PF00381 PTS HPr component phosphorylation site HVY54_08425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_08430 PF00294 pfkB family carbohydrate kinase HVY54_08435 PF02378 Phosphotransferase system, EIIC HVY54_08435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_08440 PF00294 pfkB family carbohydrate kinase HVY54_08445 PF04227 Indigoidine synthase A like protein HVY54_08450 PF07662 Na+ dependent nucleoside transporter C-terminus HVY54_08450 PF01773 Na+ dependent nucleoside transporter N-terminus HVY54_08455 PF00027 Cyclic nucleotide-binding domain HVY54_08460 PF01156 Inosine-uridine preferring nucleoside hydrolase HVY54_08465 PF01773 Na+ dependent nucleoside transporter N-terminus HVY54_08465 PF07662 Na+ dependent nucleoside transporter C-terminus HVY54_08470 PF00294 pfkB family carbohydrate kinase HVY54_08475 PF01261 Xylose isomerase-like TIM barrel HVY54_08480 PF03601 Conserved hypothetical protein 698 HVY54_08485 PF03466 LysR substrate binding domain HVY54_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_08490 PF00324 Amino acid permease HVY54_08495 PF00593 TonB dependent receptor HVY54_08495 PF07715 TonB-dependent Receptor Plug Domain HVY54_08500 PF00756 Putative esterase HVY54_08505 PF01227 GTP cyclohydrolase I HVY54_08510 PF04235 Protein of unknown function (DUF418) HVY54_08515 PF00356 Bacterial regulatory proteins, lacI family HVY54_08520 PF13407 Periplasmic binding protein domain HVY54_08525 PF00005 ABC transporter HVY54_08530 PF02653 Branched-chain amino acid transport system / permease component HVY54_08535 PF01180 Dihydroorotate dehydrogenase HVY54_08540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVY54_08540 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_08545 PF10808 Protein of unknown function (DUF2542) HVY54_08550 PF02698 DUF218 domain HVY54_08555 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HVY54_08555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HVY54_08560 PF04172 LrgB-like family HVY54_08565 PF03788 LrgA family HVY54_08570 PF03466 LysR substrate binding domain HVY54_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_08575 PF07690 Major Facilitator Superfamily HVY54_08580 PF07883 Cupin domain HVY54_08585 PF01557 Fumarylacetoacetate (FAA) hydrolase family HVY54_08590 PF14497 Glutathione S-transferase, C-terminal domain HVY54_08590 PF02798 Glutathione S-transferase, N-terminal domain HVY54_08595 PF01494 FAD binding domain HVY54_08600 PF01207 Dihydrouridine synthase (Dus) HVY54_08610 PF02321 Outer membrane efflux protein HVY54_08620 PF09335 SNARE associated Golgi protein HVY54_08625 PF04893 Yip1 domain HVY54_08630 PF00768 D-alanyl-D-alanine carboxypeptidase HVY54_08635 PF09330 D-lactate dehydrogenase, membrane binding HVY54_08635 PF01565 FAD binding domain HVY54_08640 PF14310 Fibronectin type III-like domain HVY54_08640 PF01915 Glycosyl hydrolase family 3 C-terminal domain HVY54_08640 PF00933 Glycosyl hydrolase family 3 N terminal domain HVY54_08645 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HVY54_08650 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_08655 PF00005 ABC transporter HVY54_08660 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_08670 PF13411 MerR HTH family regulatory protein HVY54_08675 PF07694 5TMR of 5TMR-LYT HVY54_08675 PF06580 Histidine kinase HVY54_08680 PF04397 LytTr DNA-binding domain HVY54_08680 PF00072 Response regulator receiver domain HVY54_08685 PF07308 Protein of unknown function (DUF1456) HVY54_08690 PF06998 Protein of unknown function (DUF1307) HVY54_08695 PF04434 SWIM zinc finger HVY54_08700 PF05762 VWA domain containing CoxE-like protein HVY54_08710 PF07728 AAA domain (dynein-related subfamily) HVY54_08730 PF13569 Domain of unknown function (DUF4132) HVY54_08735 PF09334 tRNA synthetases class I (M) HVY54_08735 PF01588 Putative tRNA binding domain HVY54_08740 PF10609 NUBPL iron-transfer P-loop NTPase HVY54_08745 PF10836 Protein of unknown function (DUF2574) HVY54_08750 PF00419 Fimbrial protein HVY54_08755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_08755 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_08765 PF00419 Fimbrial protein HVY54_08770 PF11776 Nickel/cobalt transporter regulator HVY54_08775 PF03824 High-affinity nickel-transport protein HVY54_08780 PF02583 Metal-sensitive transcriptional repressor HVY54_08785 PF02110 Hydroxyethylthiazole kinase family HVY54_08790 PF08543 Phosphomethylpyrimidine kinase HVY54_08795 PF01183 Glycosyl hydrolases family 25 HVY54_08800 PF07702 UTRA domain HVY54_08800 PF00392 Bacterial regulatory proteins, gntR family HVY54_08805 PF00294 pfkB family carbohydrate kinase HVY54_08810 PF03747 ADP-ribosylglycohydrolase HVY54_08815 PF03825 Nucleoside H+ symporter HVY54_08820 PF01791 DeoC/LacD family aldolase HVY54_08825 PF01116 Fructose-bisphosphate aldolase class-II HVY54_08835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_08840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_08845 PF03611 PTS system sugar-specific permease component HVY54_08850 PF00107 Zinc-binding dehydrogenase HVY54_08850 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_08855 PF08220 DeoR-like helix-turn-helix domain HVY54_08860 PF00781 Diacylglycerol kinase catalytic domain HVY54_08875 PF07411 Domain of unknown function (DUF1508) HVY54_08880 PF00072 Response regulator receiver domain HVY54_08880 PF00486 Transcriptional regulatory protein, C terminal HVY54_08885 PF00512 His Kinase A (phospho-acceptor) domain HVY54_08885 PF00672 HAMP domain HVY54_08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_08890 PF07690 Major Facilitator Superfamily HVY54_08895 PF00873 AcrB/AcrD/AcrF family HVY54_08900 PF00873 AcrB/AcrD/AcrF family HVY54_08905 PF13533 Biotin-lipoyl like HVY54_08925 PF00092 von Willebrand factor type A domain HVY54_08940 PF00012 Hsp70 protein HVY54_08945 PF06029 AlkA N-terminal domain HVY54_08945 PF00730 HhH-GPD superfamily base excision DNA repair protein HVY54_08950 PF00563 EAL domain HVY54_08950 PF00990 Diguanylate cyclase, GGDEF domain HVY54_08950 PF05231 MASE1 HVY54_08950 PF08447 PAS fold HVY54_08950 PF08448 PAS fold HVY54_08950 PF13426 PAS domain HVY54_08955 PF00485 Phosphoribulokinase / Uridine kinase family HVY54_08960 PF00692 dUTPase HVY54_08965 PF05170 AsmA family HVY54_08970 PF03471 Transporter associated domain HVY54_08970 PF03741 Integral membrane protein TerC family HVY54_08970 PF00571 CBS domain HVY54_08975 PF02563 Polysaccharide biosynthesis/export protein HVY54_08975 PF10531 SLBB domain HVY54_08975 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HVY54_08980 PF01451 Low molecular weight phosphotyrosine protein phosphatase HVY54_08985 PF13807 G-rich domain on putative tyrosine kinase HVY54_08985 PF02706 Chain length determinant protein HVY54_08985 PF13614 AAA domain HVY54_08990 PF00535 Glycosyl transferase family 2 HVY54_08995 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_09000 PF13439 Glycosyltransferase Family 4 HVY54_09000 PF00534 Glycosyl transferases group 1 HVY54_09010 PF00535 Glycosyl transferase family 2 HVY54_09015 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_09020 PF16363 GDP-mannose 4,6 dehydratase HVY54_09025 PF01370 NAD dependent epimerase/dehydratase family HVY54_09030 PF00293 NUDIX domain HVY54_09035 PF00534 Glycosyl transferases group 1 HVY54_09035 PF13579 Glycosyl transferase 4-like domain HVY54_09040 PF01050 Mannose-6-phosphate isomerase HVY54_09040 PF00483 Nucleotidyl transferase HVY54_09045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVY54_09045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVY54_09045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVY54_09045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVY54_09050 PF02397 Bacterial sugar transferase HVY54_09060 PF04230 Polysaccharide pyruvyl transferase HVY54_09065 PF00534 Glycosyl transferases group 1 HVY54_09065 PF13439 Glycosyltransferase Family 4 HVY54_09075 PF00483 Nucleotidyl transferase HVY54_09080 PF16363 GDP-mannose 4,6 dehydratase HVY54_09085 PF04321 RmlD substrate binding domain HVY54_09090 PF00483 Nucleotidyl transferase HVY54_09095 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HVY54_09115 PF00535 Glycosyl transferase family 2 HVY54_09125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVY54_09125 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HVY54_09130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HVY54_09130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HVY54_09130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HVY54_09135 PF02706 Chain length determinant protein HVY54_09140 PF01502 Phosphoribosyl-AMP cyclohydrolase HVY54_09140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HVY54_09145 PF00977 Histidine biosynthesis protein HVY54_09150 PF00977 Histidine biosynthesis protein HVY54_09155 PF00117 Glutamine amidotransferase class-I HVY54_09160 PF08645 Polynucleotide kinase 3 phosphatase HVY54_09160 PF00475 Imidazoleglycerol-phosphate dehydratase HVY54_09165 PF00155 Aminotransferase class I and II HVY54_09170 PF00815 Histidinol dehydrogenase HVY54_09175 PF08029 HisG, C-terminal domain HVY54_09175 PF01634 ATP phosphoribosyltransferase HVY54_09185 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HVY54_09190 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HVY54_09195 PF01370 NAD dependent epimerase/dehydratase family HVY54_09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_09200 PF03466 LysR substrate binding domain HVY54_09210 PF13520 Amino acid permease HVY54_09215 PF04143 Sulphur transport HVY54_09220 PF01206 Sulfurtransferase TusA HVY54_09225 PF00929 Exonuclease HVY54_09225 PF08411 Exonuclease C-terminal HVY54_09230 PF00768 D-alanyl-D-alanine carboxypeptidase HVY54_09230 PF07943 Penicillin-binding protein 5, C-terminal domain HVY54_09235 PF06445 GyrI-like small molecule binding domain HVY54_09240 PF04632 Fusaric acid resistance protein family HVY54_09245 PF04363 Protein of unknown function (DUF496) HVY54_09250 PF10662 Ethanolamine utilisation - propanediol utilisation HVY54_09270 PF06755 CbtA_toxin of type IV toxin-antitoxin system HVY54_09275 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HVY54_09280 PF06174 Protein of unknown function (DUF987) HVY54_09285 PF04002 RadC-like JAB domain HVY54_09290 PF03230 Antirestriction protein HVY54_09330 PF02126 Phosphotriesterase family HVY54_09360 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HVY54_09365 PF02654 Cobalamin-5-phosphate synthase HVY54_09370 PF02277 Phosphoribosyltransferase HVY54_09375 PF03734 L,D-transpeptidase catalytic domain HVY54_09375 PF17969 L,D-transpeptidase C-terminal domain HVY54_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_09385 PF03466 LysR substrate binding domain HVY54_09390 PF03466 LysR substrate binding domain HVY54_09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_09400 PF01554 MatE HVY54_09410 PF01709 Transcriptional regulator HVY54_09415 PF01048 Phosphorylase superfamily HVY54_09415 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HVY54_09420 PF00083 Sugar (and other) transporter HVY54_09420 PF07690 Major Facilitator Superfamily HVY54_09430 PF09134 Invasin, domain 3 HVY54_09430 PF11924 Inverse autotransporter, beta-domain HVY54_09430 PF02369 Bacterial Ig-like domain (group 1) HVY54_09440 PF06167 Glucose-regulated metallo-peptidase M90 HVY54_09450 PF01292 Prokaryotic cytochrome b561 HVY54_09455 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HVY54_09460 PF01794 Ferric reductase like transmembrane component HVY54_09465 PF00174 Oxidoreductase molybdopterin binding domain HVY54_09470 PF00576 HIUase/Transthyretin family HVY54_09475 PF00486 Transcriptional regulatory protein, C terminal HVY54_09475 PF00072 Response regulator receiver domain HVY54_09480 PF00512 His Kinase A (phospho-acceptor) domain HVY54_09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_09490 PF00267 Gram-negative porin HVY54_09500 PF01966 HD domain HVY54_09505 PF18284 DNA methylase N-terminal domain HVY54_09505 PF00145 C-5 cytosine-specific DNA methylase HVY54_09510 PF03852 DNA mismatch endonuclease Vsr HVY54_09515 PF00892 EamA-like transporter family HVY54_09520 PF05661 Protein of unknown function (DUF808) HVY54_09525 PF09926 Uncharacterized small protein (DUF2158) HVY54_09530 PF00990 Diguanylate cyclase, GGDEF domain HVY54_09530 PF17151 Periplasmic sensor domain HVY54_09540 PF10733 Protein of unknown function (DUF2525) HVY54_09545 PF10781 Dextransucrase DSRB HVY54_09550 PF00196 Bacterial regulatory proteins, luxR family HVY54_09555 PF01311 Bacterial export proteins, family 1 HVY54_09560 PF01313 Bacterial export proteins, family 3 HVY54_09565 PF00813 FliP family HVY54_09570 PF04347 Flagellar biosynthesis protein, FliO HVY54_09575 PF16973 Flagellar motor switch protein FliN N-terminal HVY54_09575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVY54_09580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVY54_09580 PF02154 Flagellar motor switch protein FliM HVY54_09585 PF03748 Flagellar basal body-associated protein FliL HVY54_09590 PF02120 Flagellar hook-length control protein FliK HVY54_09595 PF02050 Flagellar FliJ protein HVY54_09600 PF18269 T3SS EscN ATPase C-terminal domain HVY54_09600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVY54_09605 PF02108 Flagellar assembly protein FliH HVY54_09610 PF14841 FliG middle domain HVY54_09610 PF14842 FliG N-terminal domain HVY54_09610 PF01706 FliG C-terminal domain HVY54_09615 PF01514 Secretory protein of YscJ/FliF family HVY54_09615 PF08345 Flagellar M-ring protein C-terminal HVY54_09620 PF02049 Flagellar hook-basal body complex protein FliE HVY54_09630 PF02586 SOS response associated peptidase (SRAP) HVY54_09635 PF01206 Sulfurtransferase TusA HVY54_09640 PF04143 Sulphur transport HVY54_09645 PF13987 YedD-like protein HVY54_09650 PF00128 Alpha amylase, catalytic domain HVY54_09650 PF02806 Alpha amylase, C-terminal all-beta domain HVY54_09655 PF05400 Flagellar protein FliT HVY54_09660 PF02561 Flagellar protein FliS HVY54_09665 PF07195 Flagellar hook-associated protein 2 C-terminus HVY54_09665 PF02465 Flagellar hook-associated protein 2 N-terminus HVY54_09670 PF00669 Bacterial flagellin N-terminal helical region HVY54_09670 PF08884 Flagellin D3 domain HVY54_09670 PF00700 Bacterial flagellin C-terminal helical region HVY54_09675 PF04545 Sigma-70, region 4 HVY54_09675 PF04542 Sigma-70 region 2 HVY54_09675 PF04539 Sigma-70 region 3 HVY54_09680 PF02899 Phage integrase, N-terminal SAM-like domain HVY54_09690 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_09705 PF00196 Bacterial regulatory proteins, luxR family HVY54_09705 PF03472 Autoinducer binding domain HVY54_09710 PF10769 Protein of unknown function (DUF2594) HVY54_09720 PF00072 Response regulator receiver domain HVY54_09720 PF00196 Bacterial regulatory proteins, luxR family HVY54_09730 PF01066 CDP-alcohol phosphatidyltransferase HVY54_09750 PF02810 SEC-C motif HVY54_09750 PF03695 Uncharacterised protein family (UPF0149) HVY54_09755 PF03222 Tryptophan/tyrosine permease family HVY54_09760 PF10678 Protein of unknown function (DUF2492) HVY54_09765 PF00210 Ferritin-like domain HVY54_09770 PF13992 YecR-like lipoprotein HVY54_09780 PF10964 Protein of unknown function (DUF2766) HVY54_09785 PF00210 Ferritin-like domain HVY54_09790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVY54_09795 PF00005 ABC transporter HVY54_09800 PF02653 Branched-chain amino acid transport system / permease component HVY54_09805 PF02358 Trehalose-phosphatase HVY54_09810 PF00982 Glycosyltransferase family 20 HVY54_09815 PF00582 Universal stress protein family HVY54_09820 PF05247 Flagellar transcriptional activator (FlhD) HVY54_09825 PF05280 Flagellar transcriptional activator (FlhC) HVY54_09830 PF01618 MotA/TolQ/ExbB proton channel family HVY54_09835 PF00691 OmpA family HVY54_09835 PF13677 Membrane MotB of proton-channel complex MotA/MotB HVY54_09840 PF09078 CheY binding HVY54_09840 PF02895 Signal transducing histidine kinase, homodimeric domain HVY54_09840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_09840 PF01627 Hpt domain HVY54_09840 PF01584 CheW-like domain HVY54_09845 PF01584 CheW-like domain HVY54_09850 PF02203 Tar ligand binding domain homologue HVY54_09850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVY54_09850 PF00672 HAMP domain HVY54_09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVY54_09855 PF00672 HAMP domain HVY54_09855 PF02203 Tar ligand binding domain homologue HVY54_09860 PF03705 CheR methyltransferase, all-alpha domain HVY54_09860 PF01739 CheR methyltransferase, SAM binding domain HVY54_09865 PF01339 CheB methylesterase HVY54_09865 PF00072 Response regulator receiver domain HVY54_09870 PF00072 Response regulator receiver domain HVY54_09875 PF04344 Chemotaxis phosphatase, CheZ HVY54_09880 PF01312 FlhB HrpN YscU SpaS Family HVY54_09885 PF00771 FHIPEP family HVY54_09890 PF06366 Flagellar protein FlhE HVY54_09895 PF07007 Lysozyme inhibitor LprI HVY54_09900 PF03485 Arginyl tRNA synthetase N terminal domain HVY54_09900 PF00750 tRNA synthetases class I (R) HVY54_09900 PF05746 DALR anticodon binding domain HVY54_09905 PF06185 YecM protein HVY54_09910 PF03932 CutC family HVY54_09915 PF03264 NapC/NirT cytochrome c family, N-terminal region HVY54_09920 PF01568 Molydopterin dinucleotide binding domain HVY54_09920 PF00384 Molybdopterin oxidoreductase HVY54_09920 PF18364 Molybdopterin oxidoreductase N-terminal domain HVY54_09925 PF08003 Protein of unknown function (DUF1698) HVY54_09930 PF13649 Methyltransferase domain HVY54_09935 PF01124 MAPEG family HVY54_09940 PF01904 Protein of unknown function DUF72 HVY54_09945 PF00857 Isochorismatase family HVY54_09950 PF00152 tRNA synthetases class II (D, K and N) HVY54_09950 PF02938 GAD domain HVY54_09950 PF01336 OB-fold nucleic acid binding domain HVY54_09955 PF00293 NUDIX domain HVY54_09960 PF01709 Transcriptional regulator HVY54_09965 PF02075 Crossover junction endodeoxyribonuclease RuvC HVY54_09970 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HVY54_09980 PF01330 RuvA N terminal domain HVY54_09980 PF07499 RuvA, C-terminal domain HVY54_09985 PF17864 RuvB AAA lid domain HVY54_09985 PF05496 Holliday junction DNA helicase RuvB P-loop domain HVY54_09985 PF05491 RuvB C-terminal winged helix domain HVY54_09990 PF00950 ABC 3 transport family HVY54_09995 PF00005 ABC transporter HVY54_10000 PF01297 Zinc-uptake complex component A periplasmic HVY54_10005 PF01551 Peptidase family M23 HVY54_10005 PF01476 LysM domain HVY54_10005 PF08525 Opacity-associated protein A N-terminal motif HVY54_10010 PF03279 Bacterial lipid A biosynthesis acyltransferase HVY54_10015 PF00224 Pyruvate kinase, barrel domain HVY54_10015 PF02887 Pyruvate kinase, alpha/beta domain HVY54_10020 PF01418 Helix-turn-helix domain, rpiR family HVY54_10020 PF01380 SIS domain HVY54_10025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HVY54_10025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HVY54_10030 PF00920 Dehydratase family HVY54_10035 PF01081 KDPG and KHG aldolase HVY54_10040 PF02222 ATP-grasp domain HVY54_10045 PF07130 YebG protein HVY54_10050 PF13995 YebF-like protein HVY54_10055 PF04391 Protein of unknown function (DUF533) HVY54_10060 PF00326 Prolyl oligopeptidase family HVY54_10060 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HVY54_10065 PF00929 Exonuclease HVY54_10070 PF00795 Carbon-nitrogen hydrolase HVY54_10075 PF06440 DNA polymerase III, theta subunit HVY54_10080 PF04234 CopC domain HVY54_10085 PF05425 Copper resistance protein D HVY54_10090 PF10709 Protein of unknown function (DUF2511) HVY54_10095 PF00149 Calcineurin-like phosphoesterase HVY54_10100 PF07358 Protein of unknown function (DUF1482) HVY54_10105 PF07351 Protein of unknown function (DUF1480) HVY54_10110 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HVY54_10110 PF01189 16S rRNA methyltransferase RsmB/F HVY54_10110 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HVY54_10115 PF02470 MlaD protein HVY54_10120 PF04403 Paraquat-inducible protein A HVY54_10125 PF13185 GAF domain HVY54_10130 PF17516 ProQ C-terminal domain HVY54_10130 PF04352 ProQ/FINO family HVY54_10135 PF17804 Tail specific protease N-terminal domain HVY54_10135 PF03572 Peptidase family S41 HVY54_10135 PF00595 PDZ domain HVY54_10135 PF11818 C-terminal domain of tail specific protease (DUF3340) HVY54_10140 PF01435 Peptidase family M48 HVY54_10145 PF07690 Major Facilitator Superfamily HVY54_10150 PF09339 IclR helix-turn-helix domain HVY54_10150 PF01614 Bacterial transcriptional regulator HVY54_10155 PF13996 YobH-like protein HVY54_10160 PF13998 MgrB protein HVY54_10165 PF13974 YebO-like protein HVY54_10170 PF10736 Protein of unknown function (DUF2627) HVY54_10175 PF00313 'Cold-shock' DNA-binding domain HVY54_10180 PF13847 Methyltransferase domain HVY54_10185 PF02659 Putative manganese efflux pump HVY54_10190 PF06173 Protein of unknown function (DUF986) HVY54_10195 PF03613 PTS system mannose/fructose/sorbose family IID component HVY54_10200 PF03609 PTS system sorbose-specific iic component HVY54_10205 PF03610 PTS system fructose IIA component HVY54_10205 PF03830 PTS system sorbose subfamily IIB component HVY54_10210 PF03741 Integral membrane protein TerC family HVY54_10210 PF03471 Transporter associated domain HVY54_10215 PF00563 EAL domain HVY54_10215 PF12792 CSS motif domain associated with EAL HVY54_10220 PF03313 Serine dehydratase alpha chain HVY54_10220 PF03315 Serine dehydratase beta chain HVY54_10225 PF00293 NUDIX domain HVY54_10230 PF04715 Anthranilate synthase component I, N terminal region HVY54_10230 PF00425 chorismate binding enzyme HVY54_10235 PF03701 Uncharacterised protein family (UPF0181) HVY54_10240 PF08986 Domain of unknown function (DUF1889) HVY54_10245 PF01042 Endoribonuclease L-PSP HVY54_10250 PF04851 Type III restriction enzyme, res subunit HVY54_10250 PF13307 Helicase C-terminal domain HVY54_10255 PF00814 Glycoprotease family HVY54_10260 PF03843 Outer membrane lipoprotein Slp family HVY54_10265 PF00501 AMP-binding enzyme HVY54_10265 PF13193 AMP-binding enzyme C-terminal domain HVY54_10270 PF00570 HRDC domain HVY54_10270 PF01612 3'-5' exonuclease HVY54_10275 PF00970 Oxidoreductase FAD-binding domain HVY54_10275 PF00175 Oxidoreductase NAD-binding domain HVY54_10275 PF00111 2Fe-2S iron-sulfur cluster binding domain HVY54_10280 PF00355 Rieske [2Fe-2S] domain HVY54_10280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HVY54_10285 PF02028 BCCT, betaine/carnitine/choline family transporter HVY54_10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_10295 PF03466 LysR substrate binding domain HVY54_10300 PF01810 LysE type translocator HVY54_10305 PF09313 Domain of unknown function (DUF1971) HVY54_10310 PF08956 Domain of unknown function (DUF1869) HVY54_10315 PF04226 Transglycosylase associated protein HVY54_10330 PF00990 Diguanylate cyclase, GGDEF domain HVY54_10330 PF13185 GAF domain HVY54_10335 PF03891 Domain of unknown function (DUF333) HVY54_10340 PF04343 Protein of unknown function, DUF488 HVY54_10345 PF07690 Major Facilitator Superfamily HVY54_10350 PF02311 AraC-like ligand binding domain HVY54_10350 PF12833 Helix-turn-helix domain HVY54_10355 PF04284 Protein of unknown function (DUF441) HVY54_10365 PF04073 Aminoacyl-tRNA editing domain HVY54_10370 PF17155 Gammaproteobacterial periplasmic sensor domain HVY54_10370 PF00990 Diguanylate cyclase, GGDEF domain HVY54_10375 PF00990 Diguanylate cyclase, GGDEF domain HVY54_10375 PF17158 Membrane-associated sensor, integral membrane domain HVY54_10380 PF04285 Protein of unknown function (DUF444) HVY54_10385 PF08298 PrkA AAA domain HVY54_10385 PF06798 PrkA serine protein kinase C-terminal domain HVY54_10390 PF06629 MltA-interacting protein MipA HVY54_10395 PF00248 Aldo/keto reductase family HVY54_10400 PF01263 Aldose 1-epimerase HVY54_10405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HVY54_10405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HVY54_10410 PF01641 SelR domain HVY54_10415 PF07023 Protein of unknown function (DUF1315) HVY54_10420 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_10420 PF00107 Zinc-binding dehydrogenase HVY54_10425 PF00083 Sugar (and other) transporter HVY54_10430 PF00107 Zinc-binding dehydrogenase HVY54_10430 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_10435 PF01116 Fructose-bisphosphate aldolase class-II HVY54_10440 PF00294 pfkB family carbohydrate kinase HVY54_10445 PF00248 Aldo/keto reductase family HVY54_10450 PF00455 DeoR C terminal sensor domain HVY54_10450 PF08220 DeoR-like helix-turn-helix domain HVY54_10455 PF00083 Sugar (and other) transporter HVY54_10460 PF00857 Isochorismatase family HVY54_10465 PF17763 Glutaminase/Asparaginase C-terminal domain HVY54_10465 PF00710 Asparaginase, N-terminal HVY54_10470 PF01343 Peptidase family S49 HVY54_10475 PF00881 Nitroreductase family HVY54_10480 PF00586 AIR synthase related protein, N-terminal domain HVY54_10480 PF02769 AIR synthase related protein, C-terminal domain HVY54_10485 PF01751 Toprim domain HVY54_10485 PF01131 DNA topoisomerase HVY54_10490 PF06889 Protein of unknown function (DUF1266) HVY54_10495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HVY54_10495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HVY54_10500 PF07383 Protein of unknown function (DUF1496) HVY54_10505 PF00293 NUDIX domain HVY54_10510 PF01066 CDP-alcohol phosphatidyltransferase HVY54_10515 PF00581 Rhodanese-like domain HVY54_10520 PF00005 ABC transporter HVY54_10525 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_10530 PF13416 Bacterial extracellular solute-binding protein HVY54_10535 PF02627 Carboxymuconolactone decarboxylase family HVY54_10540 PF09335 SNARE associated Golgi protein HVY54_10550 PF09335 SNARE associated Golgi protein HVY54_10555 PF03372 Endonuclease/Exonuclease/phosphatase family HVY54_10560 PF00202 Aminotransferase class-III HVY54_10565 PF04958 Arginine N-succinyltransferase beta subunit HVY54_10570 PF00171 Aldehyde dehydrogenase family HVY54_10575 PF04996 Succinylarginine dihydrolase HVY54_10580 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HVY54_10585 PF07813 LTXXQ motif family protein HVY54_10590 PF05962 HutD HVY54_10600 PF02540 NAD synthase HVY54_10605 PF04355 SmpA / OmlA family HVY54_10610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_10615 PF02378 Phosphotransferase system, EIIC HVY54_10620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HVY54_10625 PF12833 Helix-turn-helix domain HVY54_10625 PF07883 Cupin domain HVY54_10630 PF11975 Family 4 glycosyl hydrolase C-terminal domain HVY54_10630 PF02056 Family 4 glycosyl hydrolase HVY54_10635 PF04794 YdjC-like protein HVY54_10640 PF18011 C-terminal domain found in long catalases HVY54_10640 PF00199 Catalase HVY54_10640 PF06628 Catalase-related immune-responsive HVY54_10645 PF10729 Cell division activator CedA HVY54_10660 PF04307 LexA-binding, inner membrane-associated putative hydrolase HVY54_10665 PF13419 Haloacid dehalogenase-like hydrolase HVY54_10670 PF14002 YniB-like protein HVY54_10675 PF03881 Fructosamine kinase HVY54_10680 PF11080 Endoribonuclease GhoS HVY54_10685 PF00294 pfkB family carbohydrate kinase HVY54_10690 PF04338 Protein of unknown function, DUF481 HVY54_10705 PF02824 TGS domain HVY54_10705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVY54_10705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HVY54_10705 PF03129 Anticodon binding domain HVY54_10710 PF05198 Translation initiation factor IF-3, N-terminal domain HVY54_10710 PF00707 Translation initiation factor IF-3, C-terminal domain HVY54_10715 PF01632 Ribosomal protein L35 HVY54_10720 PF00453 Ribosomal protein L20 HVY54_10730 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HVY54_10730 PF01409 tRNA synthetases class II core domain (F) HVY54_10735 PF03483 B3/4 domain HVY54_10735 PF01588 Putative tRNA binding domain HVY54_10735 PF03484 tRNA synthetase B5 domain HVY54_10735 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HVY54_10735 PF03147 Ferredoxin-fold anticodon binding domain HVY54_10740 PF00216 Bacterial DNA-binding protein HVY54_10770 PF17482 Phage tail sheath C-terminal domain HVY54_10770 PF04984 Phage tail sheath protein subtilisin-like domain HVY54_10830 PF00589 Phage integrase family HVY54_10830 PF02899 Phage integrase, N-terminal SAM-like domain HVY54_10845 PF01032 FecCD transport family HVY54_10850 PF00255 Glutathione peroxidase HVY54_10855 PF00005 ABC transporter HVY54_10860 PF00877 NlpC/P60 family HVY54_10865 PF00563 EAL domain HVY54_10870 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HVY54_10875 PF10636 Hemin uptake protein hemP HVY54_10880 PF00793 DAHP synthetase I family HVY54_10885 PF03618 Kinase/pyrophosphorylase HVY54_10890 PF00391 PEP-utilising enzyme, mobile domain HVY54_10890 PF02896 PEP-utilising enzyme, TIM barrel domain HVY54_10890 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HVY54_10895 PF13193 AMP-binding enzyme C-terminal domain HVY54_10895 PF00501 AMP-binding enzyme HVY54_10905 PF01494 FAD binding domain HVY54_10910 PF01012 Electron transfer flavoprotein domain HVY54_10910 PF00766 Electron transfer flavoprotein FAD-binding domain HVY54_10915 PF01012 Electron transfer flavoprotein domain HVY54_10925 PF02770 Acyl-CoA dehydrogenase, middle domain HVY54_10925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HVY54_10925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVY54_10930 PF01144 Coenzyme A transferase HVY54_10935 PF01487 Type I 3-dehydroquinase HVY54_10940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HVY54_10940 PF08501 Shikimate dehydrogenase substrate binding domain HVY54_10945 PF07690 Major Facilitator Superfamily HVY54_10950 PF07690 Major Facilitator Superfamily HVY54_10955 PF08965 Domain of unknown function (DUF1870) HVY54_10965 PF01594 AI-2E family transporter HVY54_10970 PF13183 4Fe-4S dicluster domain HVY54_10970 PF01565 FAD binding domain HVY54_10970 PF02913 FAD linked oxidases, C-terminal domain HVY54_10975 PF03061 Thioesterase superfamily HVY54_10980 PF15930 Domain of unknown function HVY54_10985 PF01521 Iron-sulphur cluster biosynthesis HVY54_10990 PF01458 Uncharacterized protein family (UPF0051) HVY54_10995 PF00005 ABC transporter HVY54_11000 PF01458 Uncharacterized protein family (UPF0051) HVY54_11005 PF00266 Aminotransferase class-V HVY54_11010 PF02657 Fe-S metabolism associated domain HVY54_11015 PF17969 L,D-transpeptidase C-terminal domain HVY54_11015 PF01476 LysM domain HVY54_11015 PF03734 L,D-transpeptidase catalytic domain HVY54_11020 PF04728 Lipoprotein leucine-zipper HVY54_11025 PF02887 Pyruvate kinase, alpha/beta domain HVY54_11025 PF00224 Pyruvate kinase, barrel domain HVY54_11030 PF10965 Protein of unknown function (DUF2767) HVY54_11035 PF12800 4Fe-4S binding domain HVY54_11035 PF13247 4Fe-4S dicluster domain HVY54_11040 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain HVY54_11040 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 HVY54_11050 PF13247 4Fe-4S dicluster domain HVY54_11055 PF01292 Prokaryotic cytochrome b561 HVY54_11065 PF13454 FAD-NAD(P)-binding HVY54_11070 PF08803 Putative mono-oxygenase ydhR HVY54_11085 PF03212 Pertactin HVY54_11085 PF16168 Adhesin of bacterial autotransporter system, probable stalk HVY54_11090 PF01554 MatE HVY54_11095 PF00677 Lumazine binding domain HVY54_11105 PF07690 Major Facilitator Superfamily HVY54_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_11110 PF03466 LysR substrate binding domain HVY54_11115 PF00356 Bacterial regulatory proteins, lacI family HVY54_11125 PF07690 Major Facilitator Superfamily HVY54_11130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HVY54_11130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HVY54_11135 PF00877 NlpC/P60 family HVY54_11140 PF00462 Glutaredoxin HVY54_11145 PF00270 DEAD/DEAH box helicase HVY54_11145 PF08494 DEAD/H associated HVY54_11145 PF00271 Helicase conserved C-terminal domain HVY54_11150 PF00929 Exonuclease HVY54_11155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HVY54_11160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HVY54_11165 PF00440 Bacterial regulatory proteins, tetR family HVY54_11165 PF16925 Tetracyclin repressor-like, C-terminal domain HVY54_11170 PF06945 Protein of unknown function (DUF1289) HVY54_11175 PF00248 Aldo/keto reductase family HVY54_11180 PF00080 Copper/zinc superoxide dismutase (SODC) HVY54_11185 PF04632 Fusaric acid resistance protein family HVY54_11190 PF00529 HlyD membrane-fusion protein of T1SS HVY54_11190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_11195 PF07869 Protein of unknown function (DUF1656) HVY54_11200 PF01047 MarR family HVY54_11205 PF05433 Glycine zipper 2TM domain HVY54_11210 PF03702 Anhydro-N-acetylmuramic acid kinase HVY54_11215 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HVY54_11220 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HVY54_11220 PF01243 Pyridoxamine 5'-phosphate oxidase HVY54_11225 PF01479 S4 domain HVY54_11225 PF00579 tRNA synthetases class I (W and Y) HVY54_11230 PF08543 Phosphomethylpyrimidine kinase HVY54_11235 PF00043 Glutathione S-transferase, C-terminal domain HVY54_11235 PF02798 Glutathione S-transferase, N-terminal domain HVY54_11240 PF00854 POT family HVY54_11245 PF00730 HhH-GPD superfamily base excision DNA repair protein HVY54_11245 PF00633 Helix-hairpin-helix motif HVY54_11245 PF10576 Iron-sulfur binding domain of endonuclease III HVY54_11250 PF02508 Rnf-Nqr subunit, membrane protein HVY54_11255 PF04205 FMN-binding domain HVY54_11260 PF03116 NQR2, RnfD, RnfE family HVY54_11265 PF13375 RnfC Barrel sandwich hybrid domain HVY54_11265 PF10531 SLBB domain HVY54_11265 PF12838 4Fe-4S dicluster domain HVY54_11265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HVY54_11270 PF04060 Putative Fe-S cluster HVY54_11275 PF02508 Rnf-Nqr subunit, membrane protein HVY54_11280 PF10754 Protein of unknown function (DUF2569) HVY54_11285 PF05321 Haemolysin expression modulating protein HVY54_11295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HVY54_11295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVY54_11300 PF00962 Adenosine/AMP deaminase HVY54_11305 PF00155 Aminotransferase class I and II HVY54_11310 PF02378 Phosphotransferase system, EIIC HVY54_11310 PF00367 phosphotransferase system, EIIB HVY54_11315 PF00356 Bacterial regulatory proteins, lacI family HVY54_11315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVY54_11325 PF00440 Bacterial regulatory proteins, tetR family HVY54_11330 PF00703 Glycosyl hydrolases family 2 HVY54_11330 PF02837 Glycosyl hydrolases family 2, sugar binding domain HVY54_11330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HVY54_11340 PF03573 outer membrane porin, OprD family HVY54_11345 PF06097 Bacterial protein of unknown function (DUF945) HVY54_11350 PF01238 Phosphomannose isomerase type I HVY54_11355 PF05683 Fumarase C-terminus HVY54_11355 PF05681 Fumarate hydratase (Fumerase) HVY54_11360 PF10415 Fumarase C C-terminus HVY54_11360 PF00206 Lyase HVY54_11365 PF05472 DNA replication terminus site-binding protein (Ter protein) HVY54_11370 PF00512 His Kinase A (phospho-acceptor) domain HVY54_11370 PF00672 HAMP domain HVY54_11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_11380 PF00072 Response regulator receiver domain HVY54_11380 PF00486 Transcriptional regulatory protein, C terminal HVY54_11385 PF06942 GlpM protein HVY54_11395 PF13520 Amino acid permease HVY54_11400 PF07338 Protein of unknown function (DUF1471) HVY54_11405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HVY54_11405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HVY54_11405 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HVY54_11410 PF02233 NAD(P) transhydrogenase beta subunit HVY54_11415 PF01594 AI-2E family transporter HVY54_11420 PF00893 Small Multidrug Resistance protein HVY54_11425 PF00893 Small Multidrug Resistance protein HVY54_11430 PF00089 Trypsin HVY54_11445 PF07690 Major Facilitator Superfamily HVY54_11450 PF03466 LysR substrate binding domain HVY54_11450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_11455 PF00480 ROK family HVY54_11465 PF00654 Voltage gated chloride channel HVY54_11470 PF02613 Nitrate reductase delta subunit HVY54_11475 PF04976 DMSO reductase anchor subunit (DmsC) HVY54_11480 PF12800 4Fe-4S binding domain HVY54_11480 PF13247 4Fe-4S dicluster domain HVY54_11485 PF00384 Molybdopterin oxidoreductase HVY54_11485 PF01568 Molydopterin dinucleotide binding domain HVY54_11485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVY54_11490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVY54_11490 PF01568 Molydopterin dinucleotide binding domain HVY54_11490 PF00384 Molybdopterin oxidoreductase HVY54_11495 PF06649 Protein of unknown function (DUF1161) HVY54_11500 PF06788 Uncharacterised protein family (UPF0257) HVY54_11505 PF13302 Acetyltransferase (GNAT) domain HVY54_11510 PF06932 Protein of unknown function (DUF1283) HVY54_11515 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HVY54_11520 PF13378 Enolase C-terminal domain-like HVY54_11520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVY54_11525 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_11525 PF00107 Zinc-binding dehydrogenase HVY54_11555 PF14282 FlxA-like protein HVY54_11565 PF04221 RelB antitoxin HVY54_11570 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HVY54_11575 PF01848 Hok/gef family HVY54_11590 PF06147 Protein of unknown function (DUF968) HVY54_11595 PF03589 Antitermination protein HVY54_11605 PF00313 'Cold-shock' DNA-binding domain HVY54_11610 PF00313 'Cold-shock' DNA-binding domain HVY54_11615 PF04971 Bacteriophage P21 holin S HVY54_11620 PF07041 Protein of unknown function (DUF1327) HVY54_11625 PF00959 Phage lysozyme HVY54_11630 PF10721 Protein of unknown function (DUF2514) HVY54_11635 PF00313 'Cold-shock' DNA-binding domain HVY54_11655 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system HVY54_11660 PF07166 Protein of unknown function (DUF1398) HVY54_11665 PF13132 Domain of unknown function (DUF3950) HVY54_11675 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVY54_11680 PF00239 Resolvase, N terminal domain HVY54_11680 PF02796 Helix-turn-helix domain of resolvase HVY54_11700 PF01232 Mannitol dehydrogenase Rossmann domain HVY54_11700 PF08125 Mannitol dehydrogenase C-terminal domain HVY54_11705 PF14001 YdfZ protein HVY54_11710 PF07729 FCD domain HVY54_11710 PF00392 Bacterial regulatory proteins, gntR family HVY54_11715 PF00106 short chain dehydrogenase HVY54_11720 PF01432 Peptidase family M3 HVY54_11725 PF02464 Competence-damaged protein HVY54_11730 PF04076 Bacterial OB fold (BOF) protein HVY54_11735 PF00990 Diguanylate cyclase, GGDEF domain HVY54_11745 PF07690 Major Facilitator Superfamily HVY54_11750 PF00892 EamA-like transporter family HVY54_11755 PF13999 MarB protein HVY54_11760 PF12833 Helix-turn-helix domain HVY54_11765 PF01047 MarR family HVY54_11770 PF01914 MarC family integral membrane protein HVY54_11775 PF07690 Major Facilitator Superfamily HVY54_11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_11785 PF03466 LysR substrate binding domain HVY54_11790 PF00171 Aldehyde dehydrogenase family HVY54_11795 PF04960 Glutaminase HVY54_11800 PF13811 Domain of unknown function (DUF4186) HVY54_11810 PF01232 Mannitol dehydrogenase Rossmann domain HVY54_11810 PF08125 Mannitol dehydrogenase C-terminal domain HVY54_11815 PF01062 Bestrophin, RFP-TM, chloride channel HVY54_11820 PF13649 Methyltransferase domain HVY54_11825 PF03992 Antibiotic biosynthesis monooxygenase HVY54_11830 PF01791 DeoC/LacD family aldolase HVY54_11835 PF13407 Periplasmic binding protein domain HVY54_11840 PF02653 Branched-chain amino acid transport system / permease component HVY54_11845 PF02653 Branched-chain amino acid transport system / permease component HVY54_11850 PF00005 ABC transporter HVY54_11855 PF04198 Putative sugar-binding domain HVY54_11860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVY54_11860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVY54_11865 PF13018 Extended Signal Peptide of Type V secretion system HVY54_11870 PF01381 Helix-turn-helix HVY54_11875 PF13657 HipA N-terminal domain HVY54_11875 PF07804 HipA-like C-terminal domain HVY54_11930 PF00263 Bacterial type II and III secretion system protein HVY54_11930 PF03958 Bacterial type II/III secretion system short domain HVY54_11930 PF03958 Bacterial type II/III secretion system short domain HVY54_11930 PF00263 Bacterial type II and III secretion system protein HVY54_11985 PF00263 Bacterial type II and III secretion system protein HVY54_11985 PF03958 Bacterial type II/III secretion system short domain HVY54_11985 PF00263 Bacterial type II and III secretion system protein HVY54_11985 PF03958 Bacterial type II/III secretion system short domain HVY54_12005 PF00419 Fimbrial protein HVY54_12010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_12010 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_12015 PF13954 PapC N-terminal domain HVY54_12015 PF13953 PapC C-terminal domain HVY54_12015 PF00577 Outer membrane usher protein HVY54_12020 PF00419 Fimbrial protein HVY54_12025 PF00419 Fimbrial protein HVY54_12030 PF09160 FimH, mannose binding HVY54_12035 PF00384 Molybdopterin oxidoreductase HVY54_12040 PF17073 Two-component-system connector protein HVY54_12045 PF12833 Helix-turn-helix domain HVY54_12050 PF00884 Sulfatase HVY54_12055 PF13186 Iron-sulfur cluster-binding domain HVY54_12055 PF04055 Radical SAM superfamily HVY54_12065 PF00005 ABC transporter HVY54_12065 PF06472 ABC transporter transmembrane region 2 HVY54_12070 PF07715 TonB-dependent Receptor Plug Domain HVY54_12075 PF05193 Peptidase M16 inactive domain HVY54_12075 PF00675 Insulinase (Peptidase family M16) HVY54_12080 PF00282 Pyridoxal-dependent decarboxylase conserved domain HVY54_12085 PF13520 Amino acid permease HVY54_12100 PF00990 Diguanylate cyclase, GGDEF domain HVY54_12105 PF13426 PAS domain HVY54_12105 PF00990 Diguanylate cyclase, GGDEF domain HVY54_12105 PF00563 EAL domain HVY54_12110 PF01427 D-ala-D-ala dipeptidase HVY54_12115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_12125 PF12911 N-terminal TM domain of oligopeptide transport permease C HVY54_12125 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_12130 PF00005 ABC transporter HVY54_12130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_12135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_12135 PF00005 ABC transporter HVY54_12140 PF03466 LysR substrate binding domain HVY54_12140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_12145 PF01144 Coenzyme A transferase HVY54_12150 PF01144 Coenzyme A transferase HVY54_12155 PF02803 Thiolase, C-terminal domain HVY54_12155 PF00108 Thiolase, N-terminal domain HVY54_12160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HVY54_12160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HVY54_12170 PF00106 short chain dehydrogenase HVY54_12175 PF02566 OsmC-like protein HVY54_12180 PF10684 Putative biofilm-dependent modulation protein HVY54_12185 PF08136 30S ribosomal protein subunit S22 family HVY54_12190 PF00390 Malic enzyme, N-terminal domain HVY54_12190 PF03949 Malic enzyme, NAD binding domain HVY54_12195 PF00107 Zinc-binding dehydrogenase HVY54_12195 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_12200 PF01381 Helix-turn-helix HVY54_12205 PF01292 Prokaryotic cytochrome b561 HVY54_12210 PF09163 Formate dehydrogenase N, transmembrane HVY54_12210 PF12800 4Fe-4S binding domain HVY54_12210 PF13247 4Fe-4S dicluster domain HVY54_12220 PF00892 EamA-like transporter family HVY54_12225 PF00267 Gram-negative porin HVY54_12240 PF07690 Major Facilitator Superfamily HVY54_12245 PF14710 Respiratory nitrate reductase alpha N-terminal HVY54_12245 PF01568 Molydopterin dinucleotide binding domain HVY54_12245 PF00384 Molybdopterin oxidoreductase HVY54_12250 PF14711 Respiratory nitrate reductase beta C-terminal HVY54_12250 PF13247 4Fe-4S dicluster domain HVY54_12255 PF02613 Nitrate reductase delta subunit HVY54_12260 PF02665 Nitrate reductase gamma subunit HVY54_12265 PF02567 Phenazine biosynthesis-like protein HVY54_12270 PF00797 N-acetyltransferase HVY54_12275 PF01613 Flavin reductase like domain HVY54_12280 PF01361 Tautomerase enzyme HVY54_12285 PF01609 Transposase DDE domain HVY54_12285 PF13808 DDE_Tnp_1-associated HVY54_12300 PF15631 NTF2 fold immunity protein HVY54_12320 PF04717 Type VI secretion system, phage-baseplate injector HVY54_12330 PF13417 Glutathione S-transferase, N-terminal domain HVY54_12335 PF00324 Amino acid permease HVY54_12345 PF07715 TonB-dependent Receptor Plug Domain HVY54_12345 PF00593 TonB dependent receptor HVY54_12350 PF07729 FCD domain HVY54_12350 PF00392 Bacterial regulatory proteins, gntR family HVY54_12355 PF00107 Zinc-binding dehydrogenase HVY54_12355 PF16884 N-terminal domain of oxidoreductase HVY54_12360 PF00583 Acetyltransferase (GNAT) family HVY54_12365 PF04657 Putative inner membrane exporter, YdcZ HVY54_12370 PF10735 Protein of unknown function (DUF2526) HVY54_12375 PF10753 Toxin GhoT_OrtT HVY54_12385 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_12390 PF00171 Aldehyde dehydrogenase family HVY54_12395 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_12400 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_12405 PF08402 TOBE domain HVY54_12405 PF00005 ABC transporter HVY54_12410 PF13416 Bacterial extracellular solute-binding protein HVY54_12415 PF00392 Bacterial regulatory proteins, gntR family HVY54_12415 PF00155 Aminotransferase class I and II HVY54_12420 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HVY54_12420 PF01381 Helix-turn-helix HVY54_12425 PF07927 HicA toxin of bacterial toxin-antitoxin, HVY54_12430 PF10829 Protein of unknown function (DUF2554) HVY54_12435 PF12392 Collagenase HVY54_12435 PF01136 Peptidase family U32 HVY54_12440 PF07883 Cupin domain HVY54_12440 PF01381 Helix-turn-helix HVY54_12445 PF03594 Benzoate membrane transport protein HVY54_12450 PF01385 Probable transposase HVY54_12450 PF12323 Helix-turn-helix domain HVY54_12450 PF07282 Putative transposase DNA-binding domain HVY54_12460 PF11769 Protein of unknown function (DUF3313) HVY54_12465 PF03848 Tellurite resistance protein TehB HVY54_12470 PF03595 Voltage-dependent anion channel HVY54_12475 PF18836 Beta solenoid repeat from YDCK HVY54_12480 PF13302 Acetyltransferase (GNAT) domain HVY54_12485 PF04325 Protein of unknown function (DUF465) HVY54_12490 PF04349 Periplasmic glucan biosynthesis protein, MdoG HVY54_12495 PF07063 Domain of unknown function (DUF1338) HVY54_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_12500 PF03466 LysR substrate binding domain HVY54_12505 PF02203 Tar ligand binding domain homologue HVY54_12505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVY54_12505 PF00672 HAMP domain HVY54_12510 PF01848 Hok/gef family HVY54_12520 PF01292 Prokaryotic cytochrome b561 HVY54_12525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HVY54_12525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HVY54_12530 PF00171 Aldehyde dehydrogenase family HVY54_12535 PF02698 DUF218 domain HVY54_12540 PF00270 DEAD/DEAH box helicase HVY54_12540 PF11898 Domain of unknown function (DUF3418) HVY54_12540 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HVY54_12540 PF00271 Helicase conserved C-terminal domain HVY54_12540 PF04408 Helicase associated domain (HA2) HVY54_12545 PF02525 Flavodoxin-like fold HVY54_12550 PF00782 Dual specificity phosphatase, catalytic domain HVY54_12555 PF12147 Putative methyltransferase HVY54_12555 PF12146 Serine aminopeptidase, S33 HVY54_12565 PF01066 CDP-alcohol phosphatidyltransferase HVY54_12570 PF10971 Protein of unknown function (DUF2773) HVY54_12575 PF00248 Aldo/keto reductase family HVY54_12590 PF07027 Protein of unknown function (DUF1318) HVY54_12595 PF13617 YnbE-like lipoprotein HVY54_12600 PF11739 Dicarboxylate transport HVY54_12605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVY54_12605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVY54_12610 PF03724 META domain HVY54_12615 PF03891 Domain of unknown function (DUF333) HVY54_12620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HVY54_12620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_12620 PF10371 Domain of unknown function HVY54_12620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HVY54_12620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HVY54_12625 PF00267 Gram-negative porin HVY54_12630 PF00582 Universal stress protein family HVY54_12635 PF01297 Zinc-uptake complex component A periplasmic HVY54_12640 PF02386 Cation transport protein HVY54_12645 PF06085 Lipoprotein Rz1 precursor HVY54_12650 PF00959 Phage lysozyme HVY54_12655 PF04971 Bacteriophage P21 holin S HVY54_12665 PF06519 TolA C-terminal HVY54_12675 PF07102 Protein of unknown function (DUF1364) HVY54_12695 PF06254 Putative bacterial toxin ydaT HVY54_12710 PF07151 Protein of unknown function (DUF1391) HVY54_12715 PF14163 Super-infection exclusion protein B HVY54_12725 PF04181 Rtr1/RPAP2 family HVY54_12735 PF06630 Enterobacterial exodeoxyribonuclease VIII HVY54_12735 PF12684 PDDEXK-like domain of unknown function (DUF3799) HVY54_12740 PF03837 RecT family HVY54_12750 PF06688 Protein of unknown function (DUF1187) HVY54_12755 PF06806 Putative excisionase (DUF1233) HVY54_12760 PF12167 Arm DNA-binding domain HVY54_12760 PF00589 Phage integrase family HVY54_12765 PF01171 PP-loop family HVY54_12770 PF03880 DbpA RNA binding domain HVY54_12770 PF00271 Helicase conserved C-terminal domain HVY54_12770 PF00270 DEAD/DEAH box helicase HVY54_12780 PF01544 CorA-like Mg2+ transporter protein HVY54_12785 PF00990 Diguanylate cyclase, GGDEF domain HVY54_12785 PF08448 PAS fold HVY54_12790 PF01713 Smr domain HVY54_12795 PF03466 LysR substrate binding domain HVY54_12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_12800 PF01546 Peptidase family M20/M25/M40 HVY54_12800 PF07687 Peptidase dimerisation domain HVY54_12810 PF03806 AbgT putative transporter family HVY54_12815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HVY54_12815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HVY54_12820 PF00027 Cyclic nucleotide-binding domain HVY54_12820 PF00325 Bacterial regulatory proteins, crp family HVY54_12825 PF00582 Universal stress protein family HVY54_12830 PF10749 Protein of unknown function (DUF2534) HVY54_12835 PF00924 Mechanosensitive ion channel HVY54_12840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_12845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_12845 PF03466 LysR substrate binding domain HVY54_12850 PF12146 Serine aminopeptidase, S33 HVY54_12855 PF12146 Serine aminopeptidase, S33 HVY54_12865 PF00246 Zinc carboxypeptidase HVY54_12870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVY54_12870 PF13378 Enolase C-terminal domain-like HVY54_12875 PF08534 Redoxin HVY54_12880 PF18024 Helix-turn-helix domain HVY54_12880 PF00158 Sigma-54 interaction domain HVY54_12880 PF13188 PAS domain HVY54_12885 PF05128 Domain of unknown function (DUF697) HVY54_12890 PF04317 YcjX-like family, DUF463 HVY54_12895 PF00581 Rhodanese-like domain HVY54_12900 PF09584 Phage shock protein PspD (Phageshock_PspD) HVY54_12905 PF04024 PspC domain HVY54_12910 PF06667 Phage shock protein B HVY54_12915 PF04012 PspA/IM30 family HVY54_12920 PF00158 Sigma-54 interaction domain HVY54_12920 PF02954 Bacterial regulatory protein, Fis family HVY54_12925 PF00202 Aminotransferase class-III HVY54_12930 PF01266 FAD dependent oxidoreductase HVY54_12935 PF00171 Aldehyde dehydrogenase family HVY54_12940 PF01381 Helix-turn-helix HVY54_12940 PF07883 Cupin domain HVY54_12945 PF07722 Peptidase C26 HVY54_12950 PF00120 Glutamine synthetase, catalytic domain HVY54_12960 PF00324 Amino acid permease HVY54_12965 PF10820 Protein of unknown function (DUF2543) HVY54_12970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_12975 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_12980 PF12911 N-terminal TM domain of oligopeptide transport permease C HVY54_12980 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_12985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_12985 PF00005 ABC transporter HVY54_12990 PF00005 ABC transporter HVY54_12995 PF07690 Major Facilitator Superfamily HVY54_13000 PF02321 Outer membrane efflux protein HVY54_13010 PF00529 HlyD membrane-fusion protein of T1SS HVY54_13010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_13015 PF16295 Tetracyclin repressor-like, C-terminal domain HVY54_13015 PF00440 Bacterial regulatory proteins, tetR family HVY54_13030 PF00773 RNB domain HVY54_13030 PF08206 Ribonuclease B OB domain HVY54_13030 PF17876 Cold shock domain HVY54_13030 PF00575 S1 RNA binding domain HVY54_13040 PF00563 EAL domain HVY54_13040 PF13426 PAS domain HVY54_13040 PF00990 Diguanylate cyclase, GGDEF domain HVY54_13050 PF08220 DeoR-like helix-turn-helix domain HVY54_13050 PF00455 DeoR C terminal sensor domain HVY54_13055 PF05433 Glycine zipper 2TM domain HVY54_13060 PF01253 Translation initiation factor SUI1 HVY54_13065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HVY54_13070 PF18073 Rubredoxin metal binding domain HVY54_13075 PF06305 Lipopolysaccharide assembly protein A domain HVY54_13080 PF01569 PAP2 superfamily HVY54_13085 PF00925 GTP cyclohydrolase II HVY54_13090 PF00694 Aconitase C-terminal domain HVY54_13090 PF00330 Aconitase family (aconitate hydratase) HVY54_13110 PF03466 LysR substrate binding domain HVY54_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_13115 PF01396 Topoisomerase DNA binding C4 zinc finger HVY54_13115 PF01751 Toprim domain HVY54_13115 PF01131 DNA topoisomerase HVY54_13115 PF08272 Topoisomerase I zinc-ribbon-like HVY54_13120 PF10692 Protein of unknown function (DUF2498) HVY54_13125 PF08496 Peptidase family S49 N-terminal HVY54_13125 PF01343 Peptidase family S49 HVY54_13130 PF00106 short chain dehydrogenase HVY54_13135 PF12557 Cob(I)alamin adenosyltransferase N terminal HVY54_13135 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HVY54_13140 PF01479 S4 domain HVY54_13140 PF00849 RNA pseudouridylate synthase HVY54_13145 PF09972 Predicted membrane protein (DUF2207) HVY54_13150 PF01300 Telomere recombination HVY54_13155 PF02811 PHP domain HVY54_13165 PF00425 chorismate binding enzyme HVY54_13165 PF04715 Anthranilate synthase component I, N terminal region HVY54_13170 PF00117 Glutamine amidotransferase class-I HVY54_13170 PF02885 Glycosyl transferase family, helical bundle domain HVY54_13170 PF00591 Glycosyl transferase family, a/b domain HVY54_13175 PF00218 Indole-3-glycerol phosphate synthase HVY54_13175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HVY54_13180 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_13185 PF00290 Tryptophan synthase alpha chain HVY54_13190 PF10685 Stress-induced bacterial acidophilic repeat motif HVY54_13195 PF05974 Domain of unknown function (DUF892) HVY54_13200 PF05974 Domain of unknown function (DUF892) HVY54_13205 PF03922 OmpW family HVY54_13220 PF04279 Intracellular septation protein A HVY54_13225 PF03061 Thioesterase superfamily HVY54_13230 PF03544 Gram-negative bacterial TonB protein C-terminal HVY54_13235 PF03795 YCII-related domain HVY54_13240 PF02254 TrkA-N domain HVY54_13240 PF07885 Ion channel HVY54_13250 PF13396 Phospholipase_D-nuclease N-terminal HVY54_13250 PF13091 PLD-like domain HVY54_13255 PF04269 Protein of unknown function, DUF440 HVY54_13260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_13260 PF00005 ABC transporter HVY54_13265 PF00005 ABC transporter HVY54_13265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_13270 PF12911 N-terminal TM domain of oligopeptide transport permease C HVY54_13270 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_13275 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_13280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_13285 PF01914 MarC family integral membrane protein HVY54_13290 PF00171 Aldehyde dehydrogenase family HVY54_13290 PF00465 Iron-containing alcohol dehydrogenase HVY54_13295 PF01609 Transposase DDE domain HVY54_13295 PF13006 Insertion element 4 transposase N-terminal HVY54_13300 PF00265 Thymidine kinase HVY54_13305 PF00816 H-NS histone family HVY54_13310 PF00483 Nucleotidyl transferase HVY54_13315 PF00072 Response regulator receiver domain HVY54_13320 PF01734 Patatin-like phospholipase HVY54_13325 PF02810 SEC-C motif HVY54_13330 PF01842 ACT domain HVY54_13330 PF00551 Formyl transferase HVY54_13350 PF02665 Nitrate reductase gamma subunit HVY54_13355 PF02613 Nitrate reductase delta subunit HVY54_13360 PF13247 4Fe-4S dicluster domain HVY54_13360 PF14711 Respiratory nitrate reductase beta C-terminal HVY54_13365 PF14710 Respiratory nitrate reductase alpha N-terminal HVY54_13365 PF00384 Molybdopterin oxidoreductase HVY54_13365 PF01568 Molydopterin dinucleotide binding domain HVY54_13370 PF07690 Major Facilitator Superfamily HVY54_13375 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HVY54_13375 PF07730 Histidine kinase HVY54_13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_13375 PF00672 HAMP domain HVY54_13380 PF00196 Bacterial regulatory proteins, luxR family HVY54_13380 PF00072 Response regulator receiver domain HVY54_13385 PF11924 Inverse autotransporter, beta-domain HVY54_13390 PF02635 DsrE/DsrF-like family HVY54_13395 PF04752 ChaC-like protein HVY54_13400 PF06150 ChaB HVY54_13405 PF01699 Sodium/calcium exchanger protein HVY54_13410 PF13940 Toxin Ldr, type I toxin-antitoxin system HVY54_13415 PF13940 Toxin Ldr, type I toxin-antitoxin system HVY54_13420 PF00793 DAHP synthetase I family HVY54_13425 PF13369 Transglutaminase-like superfamily HVY54_13430 PF04247 Invasion gene expression up-regulator, SirB HVY54_13435 PF13847 Methyltransferase domain HVY54_13435 PF17827 PrmC N-terminal domain HVY54_13440 PF03462 PCRF domain HVY54_13440 PF00472 RF-1 domain HVY54_13445 PF01488 Shikimate / quinate 5-dehydrogenase HVY54_13445 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HVY54_13445 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HVY54_13450 PF03550 Outer membrane lipoprotein LolB HVY54_13455 PF08544 GHMP kinases C terminal HVY54_13455 PF00288 GHMP kinases N terminal domain HVY54_13460 PF14572 Phosphoribosyl synthetase-associated domain HVY54_13460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HVY54_13465 PF00916 Sulfate permease family HVY54_13465 PF01740 STAS domain HVY54_13470 PF10762 Protein of unknown function (DUF2583) HVY54_13475 PF01195 Peptidyl-tRNA hydrolase HVY54_13480 PF01926 50S ribosome-binding GTPase HVY54_13480 PF06071 Protein of unknown function (DUF933) HVY54_13490 PF02954 Bacterial regulatory protein, Fis family HVY54_13490 PF00158 Sigma-54 interaction domain HVY54_13490 PF00989 PAS fold HVY54_13495 PF02733 Dak1 domain HVY54_13500 PF02734 DAK2 domain HVY54_13505 PF03610 PTS system fructose IIA component HVY54_13505 PF00381 PTS HPr component phosphorylation site HVY54_13505 PF05524 PEP-utilising enzyme, N-terminal HVY54_13505 PF00391 PEP-utilising enzyme, mobile domain HVY54_13510 PF01204 Trehalase HVY54_13525 PF00005 ABC transporter HVY54_13530 PF13649 Methyltransferase domain HVY54_13535 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HVY54_13535 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HVY54_13545 PF04226 Transglycosylase associated protein HVY54_13550 PF07317 Flagellar regulator YcgR HVY54_13550 PF07238 PilZ domain HVY54_13555 PF01464 Transglycosylase SLT domain HVY54_13560 PF02016 LD-carboxypeptidase N-terminal domain HVY54_13560 PF17676 LD-carboxypeptidase C-terminal domain HVY54_13565 PF00999 Sodium/hydrogen exchanger family HVY54_13565 PF02080 TrkA-C domain HVY54_13565 PF03471 Transporter associated domain HVY54_13580 PF00842 Alanine racemase, C-terminal domain HVY54_13580 PF01168 Alanine racemase, N-terminal domain HVY54_13585 PF01266 FAD dependent oxidoreductase HVY54_13590 PF04293 SpoVR like protein HVY54_13595 PF00392 Bacterial regulatory proteins, gntR family HVY54_13595 PF07840 FadR C-terminal domain HVY54_13600 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HVY54_13605 PF02600 Disulfide bond formation protein DsbB HVY54_13610 PF11799 impB/mucB/samB family C-terminal domain HVY54_13610 PF00817 impB/mucB/samB family HVY54_13610 PF13438 Domain of unknown function (DUF4113) HVY54_13610 PF11798 IMS family HHH motif HVY54_13615 PF00717 Peptidase S24-like HVY54_13620 PF06109 Haemolysin E (HlyE) HVY54_13625 PF03692 Putative zinc- or iron-chelating domain HVY54_13630 PF01557 Fumarylacetoacetate (FAA) hydrolase family HVY54_13635 PF05166 YcgL domain HVY54_13640 PF04151 Bacterial pre-peptidase C-terminal domain HVY54_13645 PF05666 Fels-1 Prophage Protein-like HVY54_13650 PF03775 Septum formation inhibitor MinC, C-terminal domain HVY54_13650 PF05209 Septum formation inhibitor MinC, N-terminal domain HVY54_13655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HVY54_13660 PF03776 Septum formation topological specificity factor MinE HVY54_13685 PF13436 Glycine-zipper domain HVY54_13690 PF16456 YmgD protein HVY54_13695 PF03797 Autotransporter beta-domain HVY54_13710 PF00563 EAL domain HVY54_13710 PF12792 CSS motif domain associated with EAL HVY54_13720 PF10798 Biofilm development protein YmgB/AriR HVY54_13730 PF10798 Biofilm development protein YmgB/AriR HVY54_13735 PF00563 EAL domain HVY54_13735 PF04940 Sensors of blue-light using FAD HVY54_13740 PF13411 MerR HTH family regulatory protein HVY54_13745 PF07166 Protein of unknown function (DUF1398) HVY54_13765 PF00180 Isocitrate/isopropylmalate dehydrogenase HVY54_13770 PF00849 RNA pseudouridylate synthase HVY54_13775 PF00293 NUDIX domain HVY54_13785 PF04356 Protein of unknown function (DUF489) HVY54_13790 PF00206 Lyase HVY54_13790 PF08328 Adenylosuccinate lyase C-terminal HVY54_13795 PF00072 Response regulator receiver domain HVY54_13795 PF00486 Transcriptional regulatory protein, C terminal HVY54_13800 PF08918 PhoQ Sensor HVY54_13800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_13805 PF08007 Cupin superfamily protein HVY54_13810 PF07687 Peptidase dimerisation domain HVY54_13810 PF01546 Peptidase family M20/M25/M40 HVY54_13815 PF00005 ABC transporter HVY54_13815 PF08402 TOBE domain HVY54_13820 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_13825 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_13830 PF13416 Bacterial extracellular solute-binding protein HVY54_13835 PF02146 Sir2 family HVY54_13840 PF00480 ROK family HVY54_13845 PF02687 FtsX-like permease family HVY54_13845 PF12704 MacB-like periplasmic core domain HVY54_13850 PF00005 ABC transporter HVY54_13855 PF02687 FtsX-like permease family HVY54_13855 PF12704 MacB-like periplasmic core domain HVY54_13860 PF01757 Acyltransferase family HVY54_13865 PF17757 UvrB interaction domain HVY54_13865 PF02559 CarD-like/TRCF domain HVY54_13865 PF03461 TRCF domain HVY54_13865 PF00270 DEAD/DEAH box helicase HVY54_13865 PF00271 Helicase conserved C-terminal domain HVY54_13870 PF17969 L,D-transpeptidase C-terminal domain HVY54_13870 PF01476 LysM domain HVY54_13870 PF03734 L,D-transpeptidase catalytic domain HVY54_13875 PF07338 Protein of unknown function (DUF1471) HVY54_13880 PF00440 Bacterial regulatory proteins, tetR family HVY54_13885 PF05433 Glycine zipper 2TM domain HVY54_13890 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_13895 PF05728 Uncharacterised protein family (UPF0227) HVY54_13900 PF00933 Glycosyl hydrolase family 3 N terminal domain HVY54_13905 PF01636 Phosphotransferase enzyme family HVY54_13910 PF13036 Peptidoglycan-synthase activator LpoB HVY54_13915 PF07233 Protein of unknown function (DUF1425) HVY54_13920 PF01230 HIT domain HVY54_13925 PF07715 TonB-dependent Receptor Plug Domain HVY54_13925 PF00593 TonB dependent receptor HVY54_13930 PF00367 phosphotransferase system, EIIB HVY54_13930 PF02378 Phosphotransferase system, EIIC HVY54_13935 PF01026 TatD related DNase HVY54_13940 PF09115 DNA polymerase III, delta subunit, C terminal HVY54_13945 PF02223 Thymidylate kinase HVY54_13950 PF02618 YceG-like family HVY54_13955 PF01063 Amino-transferase class IV HVY54_13960 PF00109 Beta-ketoacyl synthase, N-terminal domain HVY54_13960 PF02801 Beta-ketoacyl synthase, C-terminal domain HVY54_13965 PF00550 Phosphopantetheine attachment site HVY54_13975 PF00698 Acyl transferase domain HVY54_13980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HVY54_13980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HVY54_13985 PF02504 Fatty acid synthesis protein HVY54_13990 PF01783 Ribosomal L32p protein family HVY54_13995 PF02620 Large ribosomal RNA subunit accumulation protein YceD HVY54_14000 PF02545 Maf-like protein HVY54_14005 PF01479 S4 domain HVY54_14005 PF00849 RNA pseudouridylate synthase HVY54_14010 PF00575 S1 RNA binding domain HVY54_14010 PF10150 Ribonuclease E/G family HVY54_14010 PF12111 Polyribonucleotide phosphorylase C terminal HVY54_14015 PF00669 Bacterial flagellin N-terminal helical region HVY54_14020 PF00460 Flagella basal body rod protein HVY54_14020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVY54_14025 PF10135 Rod binding protein HVY54_14025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HVY54_14030 PF02119 Flagellar P-ring protein HVY54_14035 PF02107 Flagellar L-ring protein HVY54_14040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVY54_14040 PF00460 Flagella basal body rod protein HVY54_14045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVY54_14045 PF00460 Flagella basal body rod protein HVY54_14050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVY54_14050 PF07559 Flagellar basal body protein FlaE HVY54_14050 PF00460 Flagella basal body rod protein HVY54_14055 PF13860 FlgD Ig-like domain HVY54_14055 PF13861 FlgD Tudor-like domain HVY54_14055 PF03963 Flagellar hook capping protein - N-terminal region HVY54_14060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVY54_14060 PF00460 Flagella basal body rod protein HVY54_14065 PF00460 Flagella basal body rod protein HVY54_14070 PF13144 Chaperone for flagella basal body P-ring formation HVY54_14075 PF04316 Anti-sigma-28 factor, FlgM HVY54_14080 PF05130 FlgN protein HVY54_14085 PF03023 Lipid II flippase MurJ HVY54_14090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVY54_14095 PF04337 Protein of unknown function, DUF480 HVY54_14100 PF13302 Acetyltransferase (GNAT) domain HVY54_14105 PF07690 Major Facilitator Superfamily HVY54_14110 PF13417 Glutathione S-transferase, N-terminal domain HVY54_14110 PF04399 Glutaredoxin 2, C terminal domain HVY54_14115 PF07273 Protein of unknown function (DUF1439) HVY54_14120 PF01979 Amidohydrolase family HVY54_14135 PF13991 BssS protein family HVY54_14140 PF01266 FAD dependent oxidoreductase HVY54_14145 PF10968 Protein of unknown function (DUF2770) HVY54_14150 PF01292 Prokaryotic cytochrome b561 HVY54_14155 PF04264 YceI-like domain HVY54_14165 PF03279 Bacterial lipid A biosynthesis acyltransferase HVY54_14170 PF07690 Major Facilitator Superfamily HVY54_14175 PF13984 MsyB protein HVY54_14180 PF07119 Protein of unknown function (DUF1375) HVY54_14185 PF01609 Transposase DDE domain HVY54_14185 PF13006 Insertion element 4 transposase N-terminal HVY54_14190 PF00535 Glycosyl transferase family 2 HVY54_14195 PF04349 Periplasmic glucan biosynthesis protein, MdoG HVY54_14200 PF01757 Acyltransferase family HVY54_14205 PF13091 PLD-like domain HVY54_14210 PF01661 Macro domain HVY54_14220 PF10610 Thin aggregative fimbriae synthesis protein HVY54_14225 PF07012 Curlin associated repeat HVY54_14230 PF07012 Curlin associated repeat HVY54_14235 PF00196 Bacterial regulatory proteins, luxR family HVY54_14240 PF10627 Curli assembly protein CsgE HVY54_14245 PF10614 Type VIII secretion system (T8SS), CsgF protein HVY54_14250 PF03783 Curli production assembly/transport component CsgG HVY54_14255 PF06496 Protein of unknown function (DUF1097) HVY54_14260 PF02613 Nitrate reductase delta subunit HVY54_14265 PF02811 PHP domain HVY54_14270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVY54_14310 PF00005 ABC transporter HVY54_14325 PF02801 Beta-ketoacyl synthase, C-terminal domain HVY54_14325 PF00109 Beta-ketoacyl synthase, N-terminal domain HVY54_14330 PF01571 Aminomethyltransferase folate-binding domain HVY54_14330 PF08669 Glycine cleavage T-protein C-terminal barrel domain HVY54_14340 PF07977 FabA-like domain HVY54_14345 PF00106 short chain dehydrogenase HVY54_14350 PF01648 4'-phosphopantetheinyl transferase superfamily HVY54_14355 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HVY54_14355 PF17287 POTRA domain HVY54_14355 PF08479 POTRA domain, ShlB-type HVY54_14360 PF05860 haemagglutination activity domain HVY54_14360 PF04829 Pre-toxin domain with VENN motif HVY54_14360 PF13332 Hemagglutinin repeat HVY54_14360 PF13018 Extended Signal Peptide of Type V secretion system HVY54_14370 PF16970 Type-1 fimbrial protein, A HVY54_14375 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_14375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_14380 PF13953 PapC C-terminal domain HVY54_14380 PF13954 PapC N-terminal domain HVY54_14380 PF00577 Outer membrane usher protein HVY54_14390 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_14390 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_14410 PF00563 EAL domain HVY54_14410 PF12792 CSS motif domain associated with EAL HVY54_14415 PF00990 Diguanylate cyclase, GGDEF domain HVY54_14415 PF17158 Membrane-associated sensor, integral membrane domain HVY54_14425 PF14883 Hypothetical glycosyl hydrolase family 13 HVY54_14425 PF01522 Polysaccharide deacetylase HVY54_14430 PF00535 Glycosyl transferase family 2 HVY54_14435 PF13994 PgaD-like protein HVY54_14440 PF02562 PhoH-like protein HVY54_14445 PF04261 Dyp-type peroxidase family HVY54_14450 PF09375 Imelysin HVY54_14450 PF13473 Cupredoxin-like domain HVY54_14455 PF03239 Iron permease FTR1 family HVY54_14465 PF00474 Sodium:solute symporter family HVY54_14475 PF14850 DNA-binding domain of Proline dehydrogenase HVY54_14475 PF01619 Proline dehydrogenase HVY54_14475 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HVY54_14475 PF00171 Aldehyde dehydrogenase family HVY54_14480 PF00440 Bacterial regulatory proteins, tetR family HVY54_14480 PF08362 YcdC-like protein, C-terminal region HVY54_14485 PF00296 Luciferase-like monooxygenase HVY54_14490 PF00857 Isochorismatase family HVY54_14495 PF01042 Endoribonuclease L-PSP HVY54_14500 PF00561 alpha/beta hydrolase fold HVY54_14505 PF00881 Nitroreductase family HVY54_14510 PF01613 Flavin reductase like domain HVY54_14515 PF00860 Permease family HVY54_14520 PF10685 Stress-induced bacterial acidophilic repeat motif HVY54_14525 PF03358 NADPH-dependent FMN reductase HVY54_14530 PF13993 YccJ-like protein HVY54_14535 PF00328 Histidine phosphatase superfamily (branch 2) HVY54_14545 PF01556 DnaJ C terminal domain HVY54_14545 PF00226 DnaJ domain HVY54_14555 PF02613 Nitrate reductase delta subunit HVY54_14560 PF00384 Molybdopterin oxidoreductase HVY54_14560 PF01568 Molydopterin dinucleotide binding domain HVY54_14560 PF18364 Molybdopterin oxidoreductase N-terminal domain HVY54_14565 PF03264 NapC/NirT cytochrome c family, N-terminal region HVY54_14570 PF00072 Response regulator receiver domain HVY54_14570 PF00486 Transcriptional regulatory protein, C terminal HVY54_14575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVY54_14580 PF01627 Hpt domain HVY54_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_14580 PF00672 HAMP domain HVY54_14580 PF00072 Response regulator receiver domain HVY54_14580 PF00512 His Kinase A (phospho-acceptor) domain HVY54_14585 PF12801 4Fe-4S binding domain HVY54_14590 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system HVY54_14595 PF15939 Putative antitoxin of bacterial toxin-antitoxin system HVY54_14605 PF00313 'Cold-shock' DNA-binding domain HVY54_14610 PF00313 'Cold-shock' DNA-binding domain HVY54_14620 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HVY54_14625 PF06251 Capsule biosynthesis GfcC HVY54_14630 PF06082 Exopolysaccharide biosynthesis protein YbjH HVY54_14635 PF10531 SLBB domain HVY54_14635 PF02563 Polysaccharide biosynthesis/export protein HVY54_14635 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HVY54_14640 PF01451 Low molecular weight phosphotyrosine protein phosphatase HVY54_14645 PF13807 G-rich domain on putative tyrosine kinase HVY54_14645 PF02706 Chain length determinant protein HVY54_14645 PF13614 AAA domain HVY54_14650 PF00328 Histidine phosphatase superfamily (branch 2) HVY54_14655 PF08173 Membrane bound YbgT-like protein HVY54_14660 PF02322 Cytochrome bd terminal oxidase subunit II HVY54_14665 PF01654 Cytochrome bd terminal oxidase subunit I HVY54_14670 PF04809 HupH hydrogenase expression protein, C-terminal conserved region HVY54_14675 PF07449 Hydrogenase-1 expression protein HyaE HVY54_14680 PF01750 Hydrogenase maturation protease HVY54_14685 PF01292 Prokaryotic cytochrome b561 HVY54_14690 PF00374 Nickel-dependent hydrogenase HVY54_14695 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HVY54_14695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVY54_14705 PF01027 Inhibitor of apoptosis-promoting Bax1 HVY54_14710 PF04358 DsrC like protein HVY54_14715 PF00708 Acylphosphatase HVY54_14720 PF17785 PUA-like domain HVY54_14720 PF10672 S-adenosylmethionine-dependent methyltransferase HVY54_14725 PF08755 Hemimethylated DNA-binding protein YccV like HVY54_14730 PF13380 CoA binding domain HVY54_14735 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HVY54_14740 PF02142 MGS-like domain HVY54_14745 PF12462 DNA helicase IV / RNA helicase N terminal HVY54_14745 PF00580 UvrD/REP helicase N-terminal domain HVY54_14745 PF13361 UvrD-like helicase C-terminal domain HVY54_14750 PF03733 Inner membrane component domain HVY54_14755 PF12805 FUSC-like inner membrane protein yccS HVY54_14760 PF04994 TfoX C-terminal domain HVY54_14760 PF04993 TfoX N-terminal domain HVY54_14765 PF03846 Cell division inhibitor SulA HVY54_14770 PF00691 OmpA family HVY54_14770 PF01389 OmpA-like transmembrane domain HVY54_14775 PF17414 MatP C-terminal ribbon-helix-helix domain HVY54_14775 PF06303 MatP N-terminal domain HVY54_14780 PF05362 Lon protease (S16) C-terminal proteolytic domain HVY54_14780 PF13654 AAA domain HVY54_14785 PF07977 FabA-like domain HVY54_14790 PF04957 Ribosome modulation factor HVY54_14795 PF03886 ABC-type transport auxiliary lipoprotein component HVY54_14800 PF02470 MlaD protein HVY54_14805 PF04403 Paraquat-inducible protein A HVY54_14810 PF12848 ABC transporter HVY54_14810 PF16326 ABC transporter C-terminal domain HVY54_14810 PF00005 ABC transporter HVY54_14815 PF02926 THUMP domain HVY54_14815 PF01170 Putative RNA methylase family UPF0020 HVY54_14815 PF10672 S-adenosylmethionine-dependent methyltransferase HVY54_14820 PF00111 2Fe-2S iron-sulfur cluster binding domain HVY54_14820 PF03473 MOSC domain HVY54_14820 PF03476 MOSC N-terminal beta barrel domain HVY54_14825 PF07126 Cell-division protein ZapC HVY54_14830 PF01180 Dihydroorotate dehydrogenase HVY54_14835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_14835 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_14840 PF00419 Fimbrial protein HVY54_14845 PF00419 Fimbrial protein HVY54_14850 PF00419 Fimbrial protein HVY54_14855 PF13953 PapC C-terminal domain HVY54_14855 PF13954 PapC N-terminal domain HVY54_14855 PF00577 Outer membrane usher protein HVY54_14860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_14860 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_14865 PF00419 Fimbrial protein HVY54_14870 PF03358 NADPH-dependent FMN reductase HVY54_14875 PF09084 NMT1/THI5 like HVY54_14880 PF00296 Luciferase-like monooxygenase HVY54_14885 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_14890 PF00005 ABC transporter HVY54_14895 PF11940 Domain of unknown function (DUF3458) Ig-like fold HVY54_14895 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HVY54_14895 PF01433 Peptidase family M1 domain HVY54_14900 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HVY54_14900 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HVY54_14905 PF01336 OB-fold nucleic acid binding domain HVY54_14905 PF00152 tRNA synthetases class II (D, K and N) HVY54_14910 PF00267 Gram-negative porin HVY54_14915 PF00155 Aminotransferase class I and II HVY54_14920 PF00753 Metallo-beta-lactamase superfamily HVY54_14925 PF05951 Bacterial protein of unknown function (DUF882) HVY54_14930 PF03734 L,D-transpeptidase catalytic domain HVY54_14930 PF01471 Putative peptidoglycan binding domain HVY54_14935 PF04310 MukB N-terminal HVY54_14935 PF16330 MukB hinge domain HVY54_14940 PF04288 MukE-like family HVY54_14945 PF17192 MukF middle domain HVY54_14945 PF17193 MukF C-terminal domain HVY54_14945 PF03882 MukF winged-helix domain HVY54_14950 PF13847 Methyltransferase domain HVY54_14955 PF02698 DUF218 domain HVY54_14960 PF01636 Phosphotransferase enzyme family HVY54_14965 PF02348 Cytidylyltransferase HVY54_14970 PF03966 Trm112p-like protein HVY54_14975 PF06224 Winged helix DNA-binding domain HVY54_14980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HVY54_14985 PF00664 ABC transporter transmembrane region HVY54_14985 PF00005 ABC transporter HVY54_14995 PF00216 Bacterial DNA-binding protein HVY54_15000 PF00575 S1 RNA binding domain HVY54_15005 PF02224 Cytidylate kinase HVY54_15010 PF01435 Peptidase family M48 HVY54_15015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVY54_15020 PF00266 Aminotransferase class-V HVY54_15025 PF04239 Protein of unknown function (DUF421) HVY54_15030 PF18381 YcaO cyclodehydratase C-terminal domain HVY54_15030 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HVY54_15035 PF01226 Formate/nitrite transporter HVY54_15040 PF02901 Pyruvate formate lyase-like HVY54_15040 PF01228 Glycine radical HVY54_15045 PF04606 Ogr/Delta-like zinc finger HVY54_15080 PF04984 Phage tail sheath protein subtilisin-like domain HVY54_15080 PF17482 Phage tail sheath C-terminal domain HVY54_15200 PF12961 Domain of unknown function (DUF3850) HVY54_15205 PF05840 Bacteriophage replication gene A protein (GPA) HVY54_15245 PF00589 Phage integrase family HVY54_15245 PF02899 Phage integrase, N-terminal SAM-like domain HVY54_15250 PF04055 Radical SAM superfamily HVY54_15260 PF13520 Amino acid permease HVY54_15265 PF07690 Major Facilitator Superfamily HVY54_15270 PF00857 Isochorismatase family HVY54_15275 PF04976 DMSO reductase anchor subunit (DmsC) HVY54_15280 PF13247 4Fe-4S dicluster domain HVY54_15280 PF12800 4Fe-4S binding domain HVY54_15285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVY54_15285 PF01568 Molydopterin dinucleotide binding domain HVY54_15285 PF00384 Molybdopterin oxidoreductase HVY54_15290 PF02403 Seryl-tRNA synthetase N-terminal domain HVY54_15290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVY54_15295 PF12002 MgsA AAA+ ATPase C terminal HVY54_15295 PF00004 ATPase family associated with various cellular activities (AAA) HVY54_15295 PF16193 AAA C-terminal domain HVY54_15300 PF03548 Outer membrane lipoprotein carrier protein LolA HVY54_15305 PF01580 FtsK/SpoIIIE family HVY54_15305 PF09397 Ftsk gamma domain HVY54_15305 PF17854 FtsK alpha domain HVY54_15305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HVY54_15310 PF01037 Lrp/AsnC ligand binding domain HVY54_15315 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_15320 PF00664 ABC transporter transmembrane region HVY54_15320 PF00005 ABC transporter HVY54_15325 PF00664 ABC transporter transmembrane region HVY54_15325 PF00005 ABC transporter HVY54_15330 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HVY54_15335 PF01176 Translation initiation factor 1A / IF-1 HVY54_15345 PF00004 ATPase family associated with various cellular activities (AAA) HVY54_15345 PF07724 AAA domain (Cdc48 subfamily) HVY54_15345 PF17871 AAA lid domain HVY54_15345 PF02861 Clp amino terminal domain, pathogenicity island component HVY54_15345 PF10431 C-terminal, D2-small domain, of ClpB protein HVY54_15350 PF02617 ATP-dependent Clp protease adaptor protein ClpS HVY54_15355 PF00313 'Cold-shock' DNA-binding domain HVY54_15360 PF12704 MacB-like periplasmic core domain HVY54_15360 PF02687 FtsX-like permease family HVY54_15360 PF00005 ABC transporter HVY54_15365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_15370 PF04393 Protein of unknown function (DUF535) HVY54_15375 PF11398 Protein of unknown function (DUF2813) HVY54_15380 PF00230 Major intrinsic protein HVY54_15385 PF03956 Lysine exporter LysO HVY54_15390 PF03063 Prismane/CO dehydrogenase family HVY54_15395 PF00111 2Fe-2S iron-sulfur cluster binding domain HVY54_15395 PF00175 Oxidoreductase NAD-binding domain HVY54_15395 PF00970 Oxidoreductase FAD-binding domain HVY54_15400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVY54_15400 PF00205 Thiamine pyrophosphate enzyme, central domain HVY54_15400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_15405 PF01212 Beta-eliminating lyase HVY54_15410 PF13460 NAD(P)H-binding HVY54_15410 PF11066 Protein of unknown function (DUF2867) HVY54_15415 PF01370 NAD dependent epimerase/dehydratase family HVY54_15420 PF01510 N-acetylmuramoyl-L-alanine amidase HVY54_15425 PF01906 Putative heavy-metal-binding HVY54_15435 PF12883 Protein of unknown function (DUF3828) HVY54_15440 PF00005 ABC transporter HVY54_15445 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_15450 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_15455 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_15460 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_15475 PF03611 PTS system sugar-specific permease component HVY54_15480 PF05958 tRNA (Uracil-5-)-methyltransferase HVY54_15485 PF10767 Protein of unknown function (DUF2593) HVY54_15490 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_15495 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_15500 PF08402 TOBE domain HVY54_15500 PF00005 ABC transporter HVY54_15505 PF13416 Bacterial extracellular solute-binding protein HVY54_15510 PF10722 Putative bacterial sensory transduction regulator HVY54_15515 PF18030 RimK PreATP-grasp domain HVY54_15515 PF08443 RimK-like ATP-grasp domain HVY54_15520 PF00881 Nitroreductase family HVY54_15525 PF07214 Protein of unknown function (DUF1418) HVY54_15530 PF00462 Glutaredoxin HVY54_15535 PF11045 Putative inner membrane protein of Enterobacteriaceae HVY54_15540 PF02080 TrkA-C domain HVY54_15540 PF06826 Predicted Permease Membrane Region HVY54_15545 PF00440 Bacterial regulatory proteins, tetR family HVY54_15550 PF07690 Major Facilitator Superfamily HVY54_15565 PF07690 Major Facilitator Superfamily HVY54_15570 PF01569 PAP2 superfamily HVY54_15575 PF00455 DeoR C terminal sensor domain HVY54_15575 PF08220 DeoR-like helix-turn-helix domain HVY54_15580 PF00768 D-alanyl-D-alanine carboxypeptidase HVY54_15580 PF07943 Penicillin-binding protein 5, C-terminal domain HVY54_15585 PF00043 Glutathione S-transferase, C-terminal domain HVY54_15585 PF13417 Glutathione S-transferase, N-terminal domain HVY54_15590 PF07995 Glucose / Sorbosone dehydrogenase HVY54_15595 PF10799 Biofilm formation protein (YliH/bssR) HVY54_15600 PF04055 Radical SAM superfamily HVY54_15600 PF00919 Uncharacterized protein family UPF0004 HVY54_15600 PF18693 TRAM domain HVY54_15615 PF17156 Gammaproteobacterial periplasmic sensor domain HVY54_15615 PF00990 Diguanylate cyclase, GGDEF domain HVY54_15620 PF17153 Periplasmic sensor domain, extracellular HVY54_15620 PF00563 EAL domain HVY54_15625 PF12911 N-terminal TM domain of oligopeptide transport permease C HVY54_15625 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_15630 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_15635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_15640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVY54_15640 PF00005 ABC transporter HVY54_15645 PF01112 Asparaginase HVY54_15650 PF03453 MoeA N-terminal region (domain I and II) HVY54_15650 PF00994 Probable molybdopterin binding domain HVY54_15650 PF03454 MoeA C-terminal region (domain IV) HVY54_15655 PF00899 ThiF family HVY54_15660 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVY54_15665 PF04055 Radical SAM superfamily HVY54_15670 PF02901 Pyruvate formate lyase-like HVY54_15670 PF01228 Glycine radical HVY54_15680 PF07350 Protein of unknown function (DUF1479) HVY54_15685 PF00005 ABC transporter HVY54_15685 PF12848 ABC transporter HVY54_15690 PF03734 L,D-transpeptidase catalytic domain HVY54_15690 PF17969 L,D-transpeptidase C-terminal domain HVY54_15695 PF03600 Citrate transporter HVY54_15700 PF01325 Iron dependent repressor, N-terminal DNA binding domain HVY54_15700 PF02742 Iron dependent repressor, metal binding and dimerisation domain HVY54_15710 PF00884 Sulfatase HVY54_15715 PF13505 Outer membrane protein beta-barrel domain HVY54_15725 PF00892 EamA-like transporter family HVY54_15730 PF00210 Ferritin-like domain HVY54_15735 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_15740 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_15745 PF00005 ABC transporter HVY54_15750 PF00924 Mechanosensitive ion channel HVY54_15755 PF05971 RNA methyltransferase HVY54_15760 PF07338 Protein of unknown function (DUF1471) HVY54_15765 PF07715 TonB-dependent Receptor Plug Domain HVY54_15765 PF00593 TonB dependent receptor HVY54_15770 PF18331 PKHD-type hydroxylase C-terminal domain HVY54_15770 PF13640 2OG-Fe(II) oxygenase superfamily HVY54_15775 PF01258 Prokaryotic dksA/traR C4-type zinc finger HVY54_15780 PF07338 Protein of unknown function (DUF1471) HVY54_15785 PF02615 Malate/L-lactate dehydrogenase HVY54_15790 PF02885 Glycosyl transferase family, helical bundle domain HVY54_15795 PF13307 Helicase C-terminal domain HVY54_15795 PF06733 DEAD_2 HVY54_15795 PF00270 DEAD/DEAH box helicase HVY54_15805 PF00270 DEAD/DEAH box helicase HVY54_15805 PF00271 Helicase conserved C-terminal domain HVY54_15810 PF00440 Bacterial regulatory proteins, tetR family HVY54_15810 PF09209 Tetracyclin repressor-like, C-terminal domain HVY54_15815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_15820 PF00005 ABC transporter HVY54_15835 PF11076 Putative inner membrane protein YbhQ HVY54_15840 PF03372 Endonuclease/Exonuclease/phosphatase family HVY54_15845 PF13091 PLD-like domain HVY54_15850 PF03706 Lysylphosphatidylglycerol synthase TM region HVY54_15855 PF01027 Inhibitor of apoptosis-promoting Bax1 HVY54_15860 PF01027 Inhibitor of apoptosis-promoting Bax1 HVY54_15865 PF02391 MoaE protein HVY54_15870 PF02597 ThiS family HVY54_15875 PF01967 MoaC family HVY54_15880 PF00994 Probable molybdopterin binding domain HVY54_15885 PF06463 Molybdenum Cofactor Synthesis C HVY54_15885 PF04055 Radical SAM superfamily HVY54_15890 PF01933 Uncharacterised protein family UPF0052 HVY54_15895 PF00271 Helicase conserved C-terminal domain HVY54_15895 PF04851 Type III restriction enzyme, res subunit HVY54_15895 PF02151 UvrB/uvrC motif HVY54_15895 PF12344 Ultra-violet resistance protein B HVY54_15895 PF17757 UvrB interaction domain HVY54_15905 PF08241 Methyltransferase domain HVY54_15910 PF00155 Aminotransferase class I and II HVY54_15915 PF06968 Biotin and Thiamin Synthesis associated domain HVY54_15915 PF04055 Radical SAM superfamily HVY54_15920 PF00202 Aminotransferase class-III HVY54_15925 PF01161 Phosphatidylethanolamine-binding protein HVY54_15930 PF00990 Diguanylate cyclase, GGDEF domain HVY54_15930 PF17158 Membrane-associated sensor, integral membrane domain HVY54_15935 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVY54_15940 PF03335 Phage tail fibre repeat HVY54_15940 PF07484 Phage Tail Collar Domain HVY54_15945 PF06316 Enterobacterial Ail/Lom protein HVY54_15975 PF06791 Prophage tail length tape measure protein HVY54_16015 PF03864 Phage major capsid protein E HVY54_16025 PF01972 Serine dehydrogenase proteinase HVY54_16025 PF01957 NfeD-like C-terminal, partner-binding HVY54_16040 PF07471 Phage DNA packaging protein Nu1 HVY54_16055 PF03864 Phage major capsid protein E HVY54_16125 PF02831 gpW HVY54_16130 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVY54_16135 PF07471 Phage DNA packaging protein Nu1 HVY54_16140 PF13132 Domain of unknown function (DUF3950) HVY54_16145 PF07166 Protein of unknown function (DUF1398) HVY54_16150 PF10549 ORF11CD3 domain HVY54_16150 PF09669 Phage regulatory protein Rha (Phage_pRha) HVY54_16160 PF03245 Bacteriophage Rz lysis protein HVY54_16165 PF00959 Phage lysozyme HVY54_16170 PF04971 Bacteriophage P21 holin S HVY54_16175 PF00267 Gram-negative porin HVY54_16180 PF06530 Phage antitermination protein Q HVY54_16190 PF05866 Endodeoxyribonuclease RusA HVY54_16215 PF05772 NinB protein HVY54_16225 PF06992 Replication protein P HVY54_16245 PF01381 Helix-turn-helix HVY54_16245 PF00717 Peptidase S24-like HVY54_16265 PF10800 Protein of unknown function (DUF2528) HVY54_16325 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain HVY54_16325 PF00589 Phage integrase family HVY54_16330 PF01095 Pectinesterase HVY54_16335 PF00330 Aconitase family (aconitate hydratase) HVY54_16335 PF00694 Aconitase C-terminal domain HVY54_16340 PF00939 Sodium:sulfate symporter transmembrane region HVY54_16345 PF04303 PrpF protein HVY54_16350 PF03466 LysR substrate binding domain HVY54_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_16355 PF10282 Lactonase, 7-bladed beta-propeller HVY54_16365 PF03459 TOBE domain HVY54_16365 PF00005 ABC transporter HVY54_16370 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_16380 PF10766 Multidrug efflux pump-associated protein AcrZ HVY54_16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_16385 PF03459 TOBE domain HVY54_16390 PF00005 ABC transporter HVY54_16395 PF16363 GDP-mannose 4,6 dehydratase HVY54_16400 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HVY54_16400 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HVY54_16405 PF08544 GHMP kinases C terminal HVY54_16405 PF10509 Galactokinase galactose-binding signature HVY54_16405 PF00288 GHMP kinases N terminal domain HVY54_16410 PF01263 Aldose 1-epimerase HVY54_16415 PF00300 Histidine phosphatase superfamily (branch 1) HVY54_16420 PF00793 DAHP synthetase I family HVY54_16425 PF13985 YbgS-like protein HVY54_16430 PF01545 Cation efflux family HVY54_16435 PF04973 Nicotinamide mononucleotide transporter HVY54_16440 PF02445 Quinolinate synthetase A protein HVY54_16485 PF13174 Tetratricopeptide repeat HVY54_16485 PF16331 TolA binding protein trimerisation HVY54_16490 PF00691 OmpA family HVY54_16495 PF07676 WD40-like Beta Propeller Repeat HVY54_16495 PF04052 TolB amino-terminal domain HVY54_16500 PF06519 TolA C-terminal HVY54_16505 PF02472 Biopolymer transport protein ExbD/TolR HVY54_16510 PF01618 MotA/TolQ/ExbB proton channel family HVY54_16515 PF03061 Thioesterase superfamily HVY54_16520 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HVY54_16525 PF08173 Membrane bound YbgT-like protein HVY54_16530 PF02322 Cytochrome bd terminal oxidase subunit II HVY54_16535 PF01654 Cytochrome bd terminal oxidase subunit I HVY54_16550 PF02310 B12 binding domain HVY54_16555 PF13941 MutL protein HVY54_16560 PF06368 Methylaspartate mutase E chain (MutE) HVY54_16565 PF07476 Methylaspartate ammonia-lyase C-terminus HVY54_16565 PF05034 Methylaspartate ammonia-lyase N-terminus HVY54_16580 PF00375 Sodium:dicarboxylate symporter family HVY54_16585 PF05683 Fumarase C-terminus HVY54_16585 PF05681 Fumarate hydratase (Fumerase) HVY54_16590 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HVY54_16590 PF12557 Cob(I)alamin adenosyltransferase N terminal HVY54_16595 PF03466 LysR substrate binding domain HVY54_16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_16600 PF02629 CoA binding domain HVY54_16600 PF00549 CoA-ligase HVY54_16605 PF08442 ATP-grasp domain HVY54_16605 PF00549 CoA-ligase HVY54_16610 PF00364 Biotin-requiring enzyme HVY54_16610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HVY54_16610 PF02817 e3 binding domain HVY54_16615 PF16870 2-oxoglutarate dehydrogenase C-terminal HVY54_16615 PF02779 Transketolase, pyrimidine binding domain HVY54_16615 PF16078 2-oxoglutarate dehydrogenase N-terminus HVY54_16615 PF00676 Dehydrogenase E1 component HVY54_16620 PF13085 2Fe-2S iron-sulfur cluster binding domain HVY54_16625 PF00890 FAD binding domain HVY54_16625 PF02910 Fumarate reductase flavoprotein C-term HVY54_16630 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HVY54_16635 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HVY54_16645 PF00285 Citrate synthase, C-terminal domain HVY54_16650 PF00419 Fimbrial protein HVY54_16655 PF00577 Outer membrane usher protein HVY54_16655 PF13954 PapC N-terminal domain HVY54_16655 PF13953 PapC C-terminal domain HVY54_16660 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_16660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_16665 PF00419 Fimbrial protein HVY54_16670 PF05145 Transition state regulatory protein AbrB HVY54_16675 PF06827 Zinc finger found in FPG and IleRS HVY54_16675 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HVY54_16675 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HVY54_16680 PF03746 LamB/YcsF family HVY54_16685 PF02626 Carboxyltransferase domain, subdomain A and B HVY54_16690 PF02682 Carboxyltransferase domain, subdomain C and D HVY54_16695 PF01784 NIF3 (NGG1p interacting factor 3) HVY54_16700 PF00854 POT family HVY54_16705 PF00875 DNA photolyase HVY54_16705 PF03441 FAD binding domain of DNA photolyase HVY54_16710 PF08349 Protein of unknown function (DUF1722) HVY54_16715 PF10725 Protein of unknown function (DUF2517) HVY54_16720 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) HVY54_16725 PF03814 Potassium-transporting ATPase A subunit HVY54_16735 PF02669 K+-transporting ATPase, c chain HVY54_16740 PF02702 Osmosensitive K+ channel His kinase sensor domain HVY54_16740 PF13493 Domain of unknown function (DUF4118) HVY54_16740 PF13492 GAF domain HVY54_16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_16740 PF00512 His Kinase A (phospho-acceptor) domain HVY54_16745 PF00072 Response regulator receiver domain HVY54_16745 PF00486 Transcriptional regulatory protein, C terminal HVY54_16755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVY54_16755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVY54_16755 PF01276 Orn/Lys/Arg decarboxylase, major domain HVY54_16760 PF13520 Amino acid permease HVY54_16765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVY54_16765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVY54_16765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVY54_16765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVY54_16770 PF17206 SeqA protein N-terminal domain HVY54_16770 PF03925 SeqA protein C-terminal domain HVY54_16775 PF12697 Alpha/beta hydrolase family HVY54_16780 PF01402 Ribbon-helix-helix protein, copG family HVY54_16785 PF00258 Flavodoxin HVY54_16795 PF01475 Ferric uptake regulator family HVY54_16800 PF13982 YbfN-like lipoprotein HVY54_16805 PF03573 outer membrane porin, OprD family HVY54_16810 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVY54_16810 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HVY54_16815 PF02378 Phosphotransferase system, EIIC HVY54_16815 PF00367 phosphotransferase system, EIIB HVY54_16815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HVY54_16820 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HVY54_16825 PF01979 Amidohydrolase family HVY54_16830 PF00480 ROK family HVY54_16830 PF01047 MarR family HVY54_16835 PF13344 Haloacid dehalogenase-like hydrolase HVY54_16840 PF13537 Glutamine amidotransferase domain HVY54_16840 PF00733 Asparagine synthase HVY54_16880 PF01494 FAD binding domain HVY54_16885 PF04055 Radical SAM superfamily HVY54_16885 PF01938 TRAM domain HVY54_16885 PF00919 Uncharacterized protein family UPF0004 HVY54_16890 PF02562 PhoH-like protein HVY54_16895 PF02130 Uncharacterized protein family UPF0054 HVY54_16900 PF03471 Transporter associated domain HVY54_16900 PF00571 CBS domain HVY54_16905 PF00795 Carbon-nitrogen hydrolase HVY54_16910 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVY54_16915 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_16920 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_16925 PF00005 ABC transporter HVY54_16930 PF01156 Inosine-uridine preferring nucleoside hydrolase HVY54_16935 PF00012 Hsp70 protein HVY54_16945 PF06889 Protein of unknown function (DUF1266) HVY54_16950 PF08238 Sel1 repeat HVY54_16960 PF06889 Protein of unknown function (DUF1266) HVY54_16965 PF08238 Sel1 repeat HVY54_16970 PF07295 Zinc-ribbon containing domain HVY54_16975 PF00133 tRNA synthetases class I (I, L, M and V) HVY54_16975 PF08264 Anticodon-binding domain of tRNA HVY54_16975 PF13603 Leucyl-tRNA synthetase, Domain 2 HVY54_16980 PF04390 Lipopolysaccharide-assembly HVY54_16985 PF06144 DNA polymerase III, delta subunit HVY54_16985 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HVY54_16990 PF01467 Cytidylyltransferase-like HVY54_16995 PF00300 Histidine phosphatase superfamily (branch 1) HVY54_17005 PF02590 Predicted SPOUT methyltransferase HVY54_17010 PF00905 Penicillin binding protein transpeptidase domain HVY54_17010 PF03717 Penicillin-binding Protein dimerisation domain HVY54_17015 PF01098 Cell cycle protein HVY54_17020 PF03330 Lytic transglycolase HVY54_17020 PF05036 Sporulation related domain HVY54_17025 PF00768 D-alanyl-D-alanine carboxypeptidase HVY54_17025 PF07943 Penicillin-binding protein 5, C-terminal domain HVY54_17030 PF04359 Protein of unknown function (DUF493) HVY54_17035 PF03099 Biotin/lipoate A/B protein ligase family HVY54_17040 PF03466 LysR substrate binding domain HVY54_17040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_17045 PF04055 Radical SAM superfamily HVY54_17045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HVY54_17050 PF02416 mttA/Hcf106 family HVY54_17055 PF00795 Carbon-nitrogen hydrolase HVY54_17060 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HVY54_17065 PF00313 'Cold-shock' DNA-binding domain HVY54_17070 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP HVY54_17075 PF03606 C4-dicarboxylate anaerobic carrier HVY54_17080 PF00072 Response regulator receiver domain HVY54_17080 PF12431 Transcriptional regulator HVY54_17085 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HVY54_17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_17085 PF00989 PAS fold HVY54_17085 PF17203 Single cache domain 3 HVY54_17090 PF08218 Citrate lyase ligase C-terminal domain HVY54_17095 PF06857 Malonate decarboxylase delta subunit (MdcD) HVY54_17100 PF03328 HpcH/HpaI aldolase/citrate lyase family HVY54_17105 PF04223 Citrate lyase, alpha subunit (CitF) HVY54_17110 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HVY54_17115 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HVY54_17120 PF00939 Sodium:sulfate symporter transmembrane region HVY54_17125 PF00445 Ribonuclease T2 family HVY54_17130 PF14760 Rnk N-terminus HVY54_17130 PF01272 Transcription elongation factor, GreA/GreB, C-term HVY54_17135 PF00107 Zinc-binding dehydrogenase HVY54_17135 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_17135 PF13823 Alcohol dehydrogenase GroES-associated HVY54_17140 PF00582 Universal stress protein family HVY54_17145 PF13192 Thioredoxin domain HVY54_17145 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_17150 PF00578 AhpC/TSA family HVY54_17150 PF10417 C-terminal domain of 1-Cys peroxiredoxin HVY54_17155 PF13098 Thioredoxin-like domain HVY54_17160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_17160 PF03466 LysR substrate binding domain HVY54_17165 PF01507 Phosphoadenosine phosphosulfate reductase family HVY54_17165 PF11922 Domain of unknown function (DUF3440) HVY54_17170 PF02195 ParB-like nuclease domain HVY54_17175 PF00155 Aminotransferase class I and II HVY54_17180 PF00465 Iron-containing alcohol dehydrogenase HVY54_17185 PF04328 Selenoprotein, putative HVY54_17190 PF02554 Carbon starvation protein CstA HVY54_17190 PF13722 5TM C-terminal transporter carbon starvation CstA HVY54_17195 PF03061 Thioesterase superfamily HVY54_17205 PF00550 Phosphopantetheine attachment site HVY54_17205 PF00857 Isochorismatase family HVY54_17210 PF13193 AMP-binding enzyme C-terminal domain HVY54_17210 PF00501 AMP-binding enzyme HVY54_17215 PF00425 chorismate binding enzyme HVY54_17220 PF01497 Periplasmic binding protein HVY54_17225 PF05977 Transmembrane secretion effector HVY54_17230 PF01032 FecCD transport family HVY54_17235 PF01032 FecCD transport family HVY54_17240 PF00005 ABC transporter HVY54_17245 PF02706 Chain length determinant protein HVY54_17250 PF00550 Phosphopantetheine attachment site HVY54_17250 PF00668 Condensation domain HVY54_17250 PF00501 AMP-binding enzyme HVY54_17250 PF00975 Thioesterase domain HVY54_17255 PF03621 MbtH-like protein HVY54_17260 PF00756 Putative esterase HVY54_17260 PF11806 Domain of unknown function (DUF3327) HVY54_17265 PF07715 TonB-dependent Receptor Plug Domain HVY54_17265 PF00593 TonB dependent receptor HVY54_17270 PF01648 4'-phosphopantetheinyl transferase superfamily HVY54_17270 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HVY54_17275 PF01848 Hok/gef family HVY54_17280 PF01848 Hok/gef family HVY54_17285 PF04107 Glutamate-cysteine ligase family 2(GCS2) HVY54_17290 PF06643 Protein of unknown function (DUF1158) HVY54_17295 PF04237 YjbR HVY54_17300 PF00881 Nitroreductase family HVY54_17305 PF00924 Mechanosensitive ion channel HVY54_17310 PF00324 Amino acid permease HVY54_17315 PF00873 AcrB/AcrD/AcrF family HVY54_17320 PF00529 HlyD membrane-fusion protein of T1SS HVY54_17320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_17325 PF11604 Copper binding periplasmic protein CusF HVY54_17330 PF02321 Outer membrane efflux protein HVY54_17335 PF00072 Response regulator receiver domain HVY54_17335 PF00486 Transcriptional regulatory protein, C terminal HVY54_17340 PF00512 His Kinase A (phospho-acceptor) domain HVY54_17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_17340 PF00672 HAMP domain HVY54_17350 PF13283 Bacteriophage N adsorption protein A C-term HVY54_17355 PF14488 Domain of unknown function (DUF4434) HVY54_17360 PF12833 Helix-turn-helix domain HVY54_17385 PF00419 Fimbrial protein HVY54_17390 PF00419 Fimbrial protein HVY54_17395 PF13953 PapC C-terminal domain HVY54_17395 PF00577 Outer membrane usher protein HVY54_17395 PF13954 PapC N-terminal domain HVY54_17400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_17400 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_17405 PF00419 Fimbrial protein HVY54_17410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HVY54_17410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HVY54_17420 PF04307 LexA-binding, inner membrane-associated putative hydrolase HVY54_17425 PF01406 tRNA synthetases class I (C) catalytic domain HVY54_17425 PF09190 DALR domain HVY54_17430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HVY54_17435 PF00149 Calcineurin-like phosphoesterase HVY54_17440 PF00731 AIR carboxylase HVY54_17445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HVY54_17445 PF02222 ATP-grasp domain HVY54_17450 PF00696 Amino acid kinase family HVY54_17455 PF11392 Protein of unknown function (DUF2877) HVY54_17460 PF06545 Protein of unknown function (DUF1116) HVY54_17465 PF02629 CoA binding domain HVY54_17465 PF00549 CoA-ligase HVY54_17470 PF02615 Malate/L-lactate dehydrogenase HVY54_17475 PF01546 Peptidase family M20/M25/M40 HVY54_17480 PF07883 Cupin domain HVY54_17480 PF05899 Protein of unknown function (DUF861) HVY54_17485 PF02595 Glycerate kinase family HVY54_17490 PF00860 Permease family HVY54_17495 PF01979 Amidohydrolase family HVY54_17500 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HVY54_17505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVY54_17505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HVY54_17510 PF01261 Xylose isomerase-like TIM barrel HVY54_17515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVY54_17515 PF00205 Thiamine pyrophosphate enzyme, central domain HVY54_17515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_17520 PF09339 IclR helix-turn-helix domain HVY54_17520 PF01614 Bacterial transcriptional regulator HVY54_17525 PF04115 Ureidoglycolate lyase HVY54_17530 PF03466 LysR substrate binding domain HVY54_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_17550 PF05593 RHS Repeat HVY54_17550 PF03527 RHS protein HVY54_17550 PF14220 Domain of unknown function (DUF4329) HVY54_17560 PF00005 ABC transporter HVY54_17565 PF13472 GDSL-like Lipase/Acylhydrolase family HVY54_17570 PF00106 short chain dehydrogenase HVY54_17575 PF00085 Thioredoxin HVY54_17580 PF03649 Uncharacterised protein family (UPF0014) HVY54_17585 PF00005 ABC transporter HVY54_17590 PF16200 C-terminal region of band_7 HVY54_17590 PF01145 SPFH domain / Band 7 family HVY54_17595 PF01957 NfeD-like C-terminal, partner-binding HVY54_17620 PF13411 MerR HTH family regulatory protein HVY54_17625 PF00529 HlyD membrane-fusion protein of T1SS HVY54_17630 PF00005 ABC transporter HVY54_17630 PF00664 ABC transporter transmembrane region HVY54_17650 PF13520 Amino acid permease HVY54_17655 PF04960 Glutaminase HVY54_17660 PF00403 Heavy-metal-associated domain HVY54_17665 PF01381 Helix-turn-helix HVY54_17670 PF01963 TraB family HVY54_17675 PF04073 Aminoacyl-tRNA editing domain HVY54_17680 PF00149 Calcineurin-like phosphoesterase HVY54_17680 PF02872 5'-nucleotidase, C-terminal domain HVY54_17685 PF07690 Major Facilitator Superfamily HVY54_17690 PF00999 Sodium/hydrogen exchanger family HVY54_17690 PF02254 TrkA-N domain HVY54_17695 PF00294 pfkB family carbohydrate kinase HVY54_17700 PF07859 alpha/beta hydrolase fold HVY54_17705 PF00762 Ferrochelatase HVY54_17710 PF05191 Adenylate kinase, active site lid HVY54_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_17715 PF00183 Hsp90 protein HVY54_17720 PF02132 RecR protein HVY54_17720 PF13662 Toprim domain HVY54_17725 PF02575 YbaB/EbfC DNA-binding family HVY54_17730 PF12169 DNA polymerase III subunits gamma and tau domain III HVY54_17730 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HVY54_17730 PF12170 DNA polymerase III tau subunit V interacting with alpha HVY54_17735 PF00156 Phosphoribosyl transferase domain HVY54_17740 PF04304 Protein of unknown function (DUF454) HVY54_17745 PF07445 Primosomal replication protein priC HVY54_17750 PF10689 Protein of unknown function (DUF2496) HVY54_17755 PF00924 Mechanosensitive ion channel HVY54_17755 PF12794 Mechanosensitive ion channel inner membrane domain 1 HVY54_17755 PF12795 Mechanosensitive ion channel porin domain HVY54_17760 PF08361 MAATS-type transcriptional repressor, C-terminal region HVY54_17760 PF00440 Bacterial regulatory proteins, tetR family HVY54_17765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_17765 PF00529 HlyD membrane-fusion protein of T1SS HVY54_17770 PF00873 AcrB/AcrD/AcrF family HVY54_17775 PF10757 Biofilm formation regulator YbaJ HVY54_17780 PF05321 Haemolysin expression modulating protein HVY54_17785 PF14602 Hexapeptide repeat of succinyl-transferase HVY54_17785 PF12464 Maltose acetyltransferase HVY54_17790 PF10777 Inner membrane protein YlaC HVY54_17795 PF00563 EAL domain HVY54_17795 PF12792 CSS motif domain associated with EAL HVY54_17800 PF07237 Protein of unknown function (DUF1428) HVY54_17810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HVY54_17815 PF09619 Type III secretion system lipoprotein chaperone (YscW) HVY54_17825 PF00909 Ammonium Transporter Family HVY54_17830 PF00543 Nitrogen regulatory protein P-II HVY54_17835 PF00664 ABC transporter transmembrane region HVY54_17835 PF00005 ABC transporter HVY54_17840 PF00005 ABC transporter HVY54_17840 PF00664 ABC transporter transmembrane region HVY54_17845 PF01037 Lrp/AsnC ligand binding domain HVY54_17845 PF13404 AsnC-type helix-turn-helix domain HVY54_17855 PF12793 Sugar transport-related sRNA regulator N-term HVY54_17855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_17860 PF06508 Queuosine biosynthesis protein QueC HVY54_17875 PF13145 PPIC-type PPIASE domain HVY54_17880 PF00216 Bacterial DNA-binding protein HVY54_17885 PF05362 Lon protease (S16) C-terminal proteolytic domain HVY54_17885 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVY54_17885 PF00004 ATPase family associated with various cellular activities (AAA) HVY54_17890 PF10431 C-terminal, D2-small domain, of ClpB protein HVY54_17890 PF06689 ClpX C4-type zinc finger HVY54_17890 PF07724 AAA domain (Cdc48 subfamily) HVY54_17895 PF00574 Clp protease HVY54_17900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVY54_17900 PF05698 Bacterial trigger factor protein (TF) C-terminus HVY54_17900 PF05697 Bacterial trigger factor protein (TF) HVY54_17905 PF01722 BolA-like protein HVY54_17910 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HVY54_17910 PF03923 Uncharacterized lipoprotein HVY54_17915 PF07690 Major Facilitator Superfamily HVY54_17920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HVY54_17920 PF06481 COX Aromatic Rich Motif HVY54_17925 PF00115 Cytochrome C and Quinol oxidase polypeptide I HVY54_17930 PF00510 Cytochrome c oxidase subunit III HVY54_17935 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HVY54_17940 PF01040 UbiA prenyltransferase family HVY54_17945 PF07690 Major Facilitator Superfamily HVY54_17950 PF04461 Protein of unknown function (DUF520) HVY54_17955 PF02558 Ketopantoate reductase PanE/ApbA HVY54_17955 PF08546 Ketopantoate reductase PanE/ApbA C terminal HVY54_17960 PF01965 DJ-1/PfpI family HVY54_17965 PF02568 Thiamine biosynthesis protein (ThiI) HVY54_17965 PF02926 THUMP domain HVY54_17970 PF02609 Exonuclease VII small subunit HVY54_17975 PF00348 Polyprenyl synthetase HVY54_17980 PF02780 Transketolase, C-terminal domain HVY54_17980 PF02779 Transketolase, pyrimidine binding domain HVY54_17980 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HVY54_17985 PF00248 Aldo/keto reductase family HVY54_17995 PF04608 Phosphatidylglycerophosphatase A HVY54_18000 PF02769 AIR synthase related protein, C-terminal domain HVY54_18000 PF00586 AIR synthase related protein, N-terminal domain HVY54_18005 PF01029 NusB family HVY54_18010 PF00885 6,7-dimethyl-8-ribityllumazine synthase HVY54_18015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HVY54_18015 PF01872 RibD C-terminal domain HVY54_18020 PF03477 ATP cone domain HVY54_18025 PF11622 Protein of unknown function (DUF3251) HVY54_18030 PF03502 Nucleoside-specific channel-forming protein, Tsx HVY54_18035 PF01844 HNH endonuclease HVY54_18040 PF07549 SecD/SecF GG Motif HVY54_18040 PF02355 Protein export membrane protein HVY54_18045 PF07549 SecD/SecF GG Motif HVY54_18045 PF13721 SecD export protein N-terminal TM region HVY54_18045 PF02355 Protein export membrane protein HVY54_18050 PF02699 Preprotein translocase subunit HVY54_18055 PF01702 Queuine tRNA-ribosyltransferase HVY54_18060 PF02547 Queuosine biosynthesis protein HVY54_18065 PF04336 Acyl carrier protein phosphodiesterase HVY54_18075 PF02903 Alpha amylase, N-terminal ig-like domain HVY54_18075 PF00128 Alpha amylase, catalytic domain HVY54_18080 PF00324 Amino acid permease HVY54_18085 PF05525 Branched-chain amino acid transport protein HVY54_18090 PF11808 Phosphate regulon sensor protein PhoR HVY54_18090 PF00512 His Kinase A (phospho-acceptor) domain HVY54_18090 PF00989 PAS fold HVY54_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_18095 PF00072 Response regulator receiver domain HVY54_18095 PF00486 Transcriptional regulatory protein, C terminal HVY54_18100 PF00149 Calcineurin-like phosphoesterase HVY54_18100 PF12320 Type 5 capsule protein repressor C-terminal domain HVY54_18105 PF13476 AAA domain HVY54_18110 PF07690 Major Facilitator Superfamily HVY54_18115 PF00480 ROK family HVY54_18120 PF04381 Putative exonuclease, RdgC HVY54_18130 PF10971 Protein of unknown function (DUF2773) HVY54_18135 PF06865 Pyrimidine/purine nucleoside phosphorylase HVY54_18140 PF07302 AroM protein HVY54_18145 PF16362 YaiA protein HVY54_18150 PF01202 Shikimate kinase HVY54_18155 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HVY54_18160 PF03807 NADP oxidoreductase coenzyme F420-dependent HVY54_18160 PF14748 Pyrroline-5-carboxylate reductase dimerisation HVY54_18165 PF05230 MASE2 domain HVY54_18165 PF00990 Diguanylate cyclase, GGDEF domain HVY54_18170 PF07769 psiF repeat HVY54_18175 PF00245 Alkaline phosphatase HVY54_18180 PF10796 Sigma-S stabilisation anti-adaptor protein HVY54_18190 PF01820 D-ala D-ala ligase N-terminus HVY54_18190 PF07478 D-ala D-ala ligase C-terminus HVY54_18195 PF10953 Protein of unknown function (DUF2754) HVY54_18200 PF10954 Protein of unknown function (DUF2755) HVY54_18205 PF07759 Protein of unknown function (DUF1615) HVY54_18210 PF05992 SbmA/BacA-like family HVY54_18215 PF00144 Beta-lactamase HVY54_18220 PF15977 Winged helix-turn-helix DNA binding HVY54_18225 PF03797 Autotransporter beta-domain HVY54_18225 PF03212 Pertactin HVY54_18230 PF00490 Delta-aminolevulinic acid dehydratase HVY54_18235 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HVY54_18240 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_18245 PF00005 ABC transporter HVY54_18250 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HVY54_18255 PF00072 Response regulator receiver domain HVY54_18255 PF00196 Bacterial regulatory proteins, luxR family HVY54_18260 PF05231 MASE1 HVY54_18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_18260 PF07730 Histidine kinase HVY54_18265 PF07690 Major Facilitator Superfamily HVY54_18275 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_18280 PF08402 TOBE domain HVY54_18280 PF00005 ABC transporter HVY54_18285 PF02583 Metal-sensitive transcriptional repressor HVY54_18290 PF00107 Zinc-binding dehydrogenase HVY54_18290 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_18295 PF00756 Putative esterase HVY54_18300 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HVY54_18305 PF07690 Major Facilitator Superfamily HVY54_18310 PF07836 DmpG-like communication domain HVY54_18310 PF00682 HMGL-like HVY54_18315 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVY54_18315 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HVY54_18320 PF01557 Fumarylacetoacetate (FAA) hydrolase family HVY54_18325 PF12697 Alpha/beta hydrolase family HVY54_18330 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HVY54_18335 PF01494 FAD binding domain HVY54_18340 PF01614 Bacterial transcriptional regulator HVY54_18340 PF09339 IclR helix-turn-helix domain HVY54_18345 PF12706 Beta-lactamase superfamily domain HVY54_18355 PF00356 Bacterial regulatory proteins, lacI family HVY54_18360 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HVY54_18360 PF00703 Glycosyl hydrolases family 2 HVY54_18360 PF16353 Domain of unknown function(DUF4981) HVY54_18360 PF02929 Beta galactosidase small chain HVY54_18360 PF02837 Glycosyl hydrolases family 2, sugar binding domain HVY54_18365 PF01306 LacY proton/sugar symporter HVY54_18370 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_18370 PF12464 Maltose acetyltransferase HVY54_18375 PF07690 Major Facilitator Superfamily HVY54_18380 PF02560 Cyanate lyase C-terminal domain HVY54_18385 PF00484 Carbonic anhydrase HVY54_18390 PF03466 LysR substrate binding domain HVY54_18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_18395 PF07969 Amidohydrolase family HVY54_18400 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HVY54_18405 PF13193 AMP-binding enzyme C-terminal domain HVY54_18405 PF16177 Acetyl-coenzyme A synthetase N-terminus HVY54_18405 PF00501 AMP-binding enzyme HVY54_18410 PF03972 MmgE/PrpD family HVY54_18415 PF00285 Citrate synthase, C-terminal domain HVY54_18425 PF06506 Propionate catabolism activator HVY54_18425 PF00158 Sigma-54 interaction domain HVY54_18425 PF02954 Bacterial regulatory protein, Fis family HVY54_18430 PF07338 Protein of unknown function (DUF1471) HVY54_18435 PF01810 LysE type translocator HVY54_18450 PF00107 Zinc-binding dehydrogenase HVY54_18450 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_18455 PF02653 Branched-chain amino acid transport system / permease component HVY54_18460 PF02653 Branched-chain amino acid transport system / permease component HVY54_18465 PF00005 ABC transporter HVY54_18470 PF13407 Periplasmic binding protein domain HVY54_18480 PF07969 Amidohydrolase family HVY54_18485 PF00696 Amino acid kinase family HVY54_18495 PF06545 Protein of unknown function (DUF1116) HVY54_18500 PF00549 CoA-ligase HVY54_18500 PF02629 CoA binding domain HVY54_18505 PF11392 Protein of unknown function (DUF2877) HVY54_18510 PF12796 Ankyrin repeats (3 copies) HVY54_18515 PF06496 Protein of unknown function (DUF1097) HVY54_18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_18520 PF03466 LysR substrate binding domain HVY54_18525 PF00563 EAL domain HVY54_18525 PF00196 Bacterial regulatory proteins, luxR family HVY54_18530 PF03797 Autotransporter beta-domain HVY54_18535 PF02028 BCCT, betaine/carnitine/choline family transporter HVY54_18540 PF00440 Bacterial regulatory proteins, tetR family HVY54_18540 PF13977 BetI-type transcriptional repressor, C-terminal HVY54_18545 PF00171 Aldehyde dehydrogenase family HVY54_18550 PF00732 GMC oxidoreductase HVY54_18550 PF05199 GMC oxidoreductase HVY54_18560 PF00196 Bacterial regulatory proteins, luxR family HVY54_18560 PF00563 EAL domain HVY54_18580 PF02589 LUD domain HVY54_18585 PF13183 4Fe-4S dicluster domain HVY54_18585 PF02589 LUD domain HVY54_18585 PF11870 Domain of unknown function (DUF3390) HVY54_18590 PF02754 Cysteine-rich domain HVY54_18595 PF12833 Helix-turn-helix domain HVY54_18595 PF12852 Cupin HVY54_18600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVY54_18600 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_18605 PF07338 Protein of unknown function (DUF1471) HVY54_18610 PF04224 Protein of unknown function, DUF417 HVY54_18630 PF01197 Ribosomal protein L31 HVY54_18635 PF00444 Ribosomal protein L36 HVY54_18645 PF00196 Bacterial regulatory proteins, luxR family HVY54_18650 PF16449 Fimbrillin MatB HVY54_18655 PF18649 EcpB C-terminal domain HVY54_18660 PF15976 CS1-pili formation C-terminal HVY54_18660 PF16967 E-set like domain HVY54_18680 PF12323 Helix-turn-helix domain HVY54_18680 PF07282 Putative transposase DNA-binding domain HVY54_18680 PF01385 Probable transposase HVY54_18685 PF03692 Putative zinc- or iron-chelating domain HVY54_18690 PF07274 Protein of unknown function (DUF1440) HVY54_18695 PF00111 2Fe-2S iron-sulfur cluster binding domain HVY54_18695 PF10518 TAT (twin-arginine translocation) pathway signal sequence HVY54_18695 PF01799 [2Fe-2S] binding domain HVY54_18700 PF00941 FAD binding domain in molybdopterin dehydrogenase HVY54_18700 PF03450 CO dehydrogenase flavoprotein C-terminal domain HVY54_18705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HVY54_18705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HVY54_18710 PF13478 XdhC Rossmann domain HVY54_18710 PF02625 XdhC and CoxI family HVY54_18715 PF07690 Major Facilitator Superfamily HVY54_18720 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HVY54_18725 PF03466 LysR substrate binding domain HVY54_18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_18735 PF00106 short chain dehydrogenase HVY54_18740 PF03466 LysR substrate binding domain HVY54_18745 PF00698 Acyl transferase domain HVY54_18745 PF09277 Erythronolide synthase, docking HVY54_18745 PF14765 Polyketide synthase dehydratase HVY54_18745 PF00550 Phosphopantetheine attachment site HVY54_18745 PF08659 KR domain HVY54_18745 PF02801 Beta-ketoacyl synthase, C-terminal domain HVY54_18745 PF08990 Erythronolide synthase docking HVY54_18745 PF16197 Ketoacyl-synthetase C-terminal extension HVY54_18745 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_18745 PF00109 Beta-ketoacyl synthase, N-terminal domain HVY54_18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_18750 PF03466 LysR substrate binding domain HVY54_18760 PF02796 Helix-turn-helix domain of resolvase HVY54_18760 PF00239 Resolvase, N terminal domain HVY54_18770 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVY54_18775 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVY54_18800 PF07157 DNA circularisation protein N-terminus HVY54_18825 PF10065 Uncharacterized conserved protein (DUF2303) HVY54_18845 PF00589 Phage integrase family HVY54_18855 PF00171 Aldehyde dehydrogenase family HVY54_18860 PF00696 Amino acid kinase family HVY54_18860 PF01472 PUA domain HVY54_18865 PF00267 Gram-negative porin HVY54_18870 PF07417 Sigma factor-binding transcriptional regulator Crl HVY54_18875 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) HVY54_18880 PF00156 Phosphoribosyl transferase domain HVY54_18885 PF07687 Peptidase dimerisation domain HVY54_18885 PF01546 Peptidase family M20/M25/M40 HVY54_18890 PF00472 RF-1 domain HVY54_18900 PF13673 Acetyltransferase (GNAT) domain HVY54_18910 PF11798 IMS family HHH motif HVY54_18910 PF00817 impB/mucB/samB family HVY54_18910 PF11799 impB/mucB/samB family C-terminal domain HVY54_18915 PF13677 Membrane MotB of proton-channel complex MotA/MotB HVY54_18915 PF00691 OmpA family HVY54_18920 PF00771 FHIPEP family HVY54_18930 PF00877 NlpC/P60 family HVY54_18935 PF04221 RelB antitoxin HVY54_18940 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HVY54_18945 PF03734 L,D-transpeptidase catalytic domain HVY54_18950 PF13230 Glutamine amidotransferases class-II HVY54_18955 PF13580 SIS domain HVY54_18960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVY54_18960 PF09317 Domain of unknown function (DUF1974) HVY54_18960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HVY54_18960 PF02770 Acyl-CoA dehydrogenase, middle domain HVY54_18970 PF00795 Carbon-nitrogen hydrolase HVY54_19020 PF00929 Exonuclease HVY54_19025 PF00075 RNase H HVY54_19030 PF08241 Methyltransferase domain HVY54_19035 PF16123 Hydroxyacylglutathione hydrolase C-terminus HVY54_19035 PF00753 Metallo-beta-lactamase superfamily HVY54_19040 PF01464 Transglycosylase SLT domain HVY54_19040 PF01476 LysM domain HVY54_19045 PF08241 Methyltransferase domain HVY54_19050 PF03372 Endonuclease/Exonuclease/phosphatase family HVY54_19055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_19055 PF03466 LysR substrate binding domain HVY54_19060 PF00248 Aldo/keto reductase family HVY54_19100 PF09383 NIL domain HVY54_19100 PF00005 ABC transporter HVY54_19105 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_19110 PF03180 NLPA lipoprotein HVY54_19115 PF16358 RcsF lipoprotein HVY54_19120 PF18389 TrmO C-terminal domain HVY54_19120 PF01980 tRNA-methyltransferase O HVY54_19125 PF04073 Aminoacyl-tRNA editing domain HVY54_19125 PF03129 Anticodon binding domain HVY54_19125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVY54_19130 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HVY54_19135 PF04170 NlpE N-terminal domain HVY54_19135 PF17185 NlpE C-terminal OB domain HVY54_19140 PF00472 RF-1 domain HVY54_19145 PF07152 YaeQ protein HVY54_19150 PF06786 Uncharacterised protein family (UPF0253) HVY54_19155 PF07073 Modulator of Rho-dependent transcription termination (ROF) HVY54_19160 PF09179 TilS substrate binding domain HVY54_19160 PF01171 PP-loop family HVY54_19160 PF11734 TilS substrate C-terminal domain HVY54_19165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HVY54_19175 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HVY54_19180 PF07733 Bacterial DNA polymerase III alpha NTPase domain HVY54_19180 PF01336 OB-fold nucleic acid binding domain HVY54_19180 PF02811 PHP domain HVY54_19180 PF14579 Helix-hairpin-helix motif HVY54_19180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HVY54_19185 PF01351 Ribonuclease HII HVY54_19190 PF02684 Lipid-A-disaccharide synthetase HVY54_19195 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_19195 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HVY54_19200 PF07977 FabA-like domain HVY54_19205 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_19205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HVY54_19210 PF03938 Outer membrane protein (OmpH-like) HVY54_19215 PF01103 Surface antigen HVY54_19215 PF07244 Surface antigen variable number repeat HVY54_19220 PF02163 Peptidase family M50 HVY54_19220 PF17820 PDZ domain HVY54_19230 PF01255 Putative undecaprenyl diphosphate synthase HVY54_19235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HVY54_19235 PF13288 DXP reductoisomerase C-terminal domain HVY54_19235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HVY54_19240 PF01765 Ribosome recycling factor HVY54_19245 PF00696 Amino acid kinase family HVY54_19250 PF00889 Elongation factor TS HVY54_19255 PF00318 Ribosomal protein S2 HVY54_19260 PF00557 Metallopeptidase family M24 HVY54_19265 PF01966 HD domain HVY54_19265 PF01909 Nucleotidyltransferase domain HVY54_19265 PF01842 ACT domain HVY54_19265 PF08335 GlnD PII-uridylyltransferase HVY54_19270 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HVY54_19270 PF14602 Hexapeptide repeat of succinyl-transferase HVY54_19270 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_19275 PF11944 Protein of unknown function (DUF3461) HVY54_19280 PF17853 GGDEF-like domain HVY54_19280 PF13556 PucR C-terminal helix-turn-helix domain HVY54_19280 PF05651 Putative sugar diacid recognition HVY54_19285 PF00595 PDZ domain HVY54_19290 PF13286 Phosphohydrolase-associated domain HVY54_19290 PF01966 HD domain HVY54_19295 PF01048 Phosphorylase superfamily HVY54_19300 PF01497 Periplasmic binding protein HVY54_19305 PF03458 UPF0126 domain HVY54_19310 PF01521 Iron-sulphur cluster biosynthesis HVY54_19320 PF00654 Voltage gated chloride channel HVY54_19325 PF00202 Aminotransferase class-III HVY54_19330 PF01032 FecCD transport family HVY54_19335 PF01497 Periplasmic binding protein HVY54_19340 PF00005 ABC transporter HVY54_19345 PF07715 TonB-dependent Receptor Plug Domain HVY54_19345 PF00593 TonB dependent receptor HVY54_19350 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal HVY54_19350 PF00912 Transglycosylase HVY54_19350 PF00905 Penicillin binding protein transpeptidase domain HVY54_19350 PF14814 Bifunctional transglycosylase second domain HVY54_19355 PF00270 DEAD/DEAH box helicase HVY54_19355 PF04408 Helicase associated domain (HA2) HVY54_19355 PF00271 Helicase conserved C-terminal domain HVY54_19355 PF08482 ATP-dependent helicase C-terminal HVY54_19360 PF02834 LigT like Phosphoesterase HVY54_19365 PF03749 Sugar fermentation stimulation protein RE domain HVY54_19365 PF17746 SfsA N-terminal OB domain HVY54_19370 PF01258 Prokaryotic dksA/traR C4-type zinc finger HVY54_19375 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVY54_19380 PF01743 Poly A polymerase head domain HVY54_19380 PF12626 Polymerase A arginine-rich C-terminus HVY54_19380 PF12627 Probable RNA and SrmB- binding site of polymerase A HVY54_19385 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HVY54_19395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_19395 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_19400 PF00577 Outer membrane usher protein HVY54_19400 PF13953 PapC C-terminal domain HVY54_19400 PF13954 PapC N-terminal domain HVY54_19405 PF00419 Fimbrial protein HVY54_19410 PF00419 Fimbrial protein HVY54_19425 PF02548 Ketopantoate hydroxymethyltransferase HVY54_19430 PF02569 Pantoate-beta-alanine ligase HVY54_19435 PF04754 Putative transposase, YhgA-like HVY54_19440 PF02261 Aspartate decarboxylase HVY54_19445 PF01522 Polysaccharide deacetylase HVY54_19450 PF03610 PTS system fructose IIA component HVY54_19455 PF01061 ABC-2 type transporter HVY54_19460 PF00005 ABC transporter HVY54_19465 PF00484 Carbonic anhydrase HVY54_19470 PF00156 Phosphoribosyl transferase domain HVY54_19475 PF01011 PQQ enzyme repeat HVY54_19480 PF07732 Multicopper oxidase HVY54_19480 PF00394 Multicopper oxidase HVY54_19480 PF07731 Multicopper oxidase HVY54_19485 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HVY54_19490 PF17284 Spermidine synthase tetramerisation domain HVY54_19495 PF02675 S-adenosylmethionine decarboxylase HVY54_19500 PF06062 Uncharacterised protein family (UPF0231) HVY54_19505 PF11791 Aconitate B N-terminal domain HVY54_19505 PF00330 Aconitase family (aconitate hydratase) HVY54_19505 PF06434 Aconitate hydratase 2 N-terminus HVY54_19510 PF11737 Protein of unknown function (DUF3300) HVY54_19515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVY54_19515 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_19520 PF00364 Biotin-requiring enzyme HVY54_19520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HVY54_19520 PF02817 e3 binding domain HVY54_19525 PF00456 Transketolase, thiamine diphosphate binding domain HVY54_19525 PF17831 Pyruvate dehydrogenase E1 component middle domain HVY54_19530 PF00392 Bacterial regulatory proteins, gntR family HVY54_19530 PF07729 FCD domain HVY54_19535 PF00324 Amino acid permease HVY54_19540 PF17113 Regulatory signalling modulator protein AmpE HVY54_19545 PF01510 N-acetylmuramoyl-L-alanine amidase HVY54_19550 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HVY54_19550 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HVY54_19555 PF07963 Prokaryotic N-terminal methylation motif HVY54_19560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HVY54_19560 PF00437 Type II/IV secretion system protein HVY54_19565 PF00482 Type II secretion system (T2SS), protein F HVY54_19570 PF00478 IMP dehydrogenase / GMP reductase domain HVY54_19580 PF01121 Dephospho-CoA kinase HVY54_19585 PF07072 Cell division protein HVY54_19590 PF03884 DNA gyrase inhibitor YacG HVY54_19595 PF00293 NUDIX domain HVY54_19600 PF02810 SEC-C motif HVY54_19600 PF07516 SecA Wing and Scaffold domain HVY54_19600 PF07517 SecA DEAD-like domain HVY54_19600 PF01043 SecA preprotein cross-linking domain HVY54_19605 PF06558 Secretion monitor precursor protein (SecM) HVY54_19610 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HVY54_19615 PF12327 FtsZ family, C-terminal domain HVY54_19615 PF00091 Tubulin/FtsZ family, GTPase domain HVY54_19620 PF02491 SHS2 domain inserted in FTSA HVY54_19625 PF03799 Cell division protein FtsQ HVY54_19625 PF08478 POTRA domain, FtsQ-type HVY54_19630 PF07478 D-ala D-ala ligase C-terminus HVY54_19630 PF01820 D-ala D-ala ligase N-terminus HVY54_19635 PF01225 Mur ligase family, catalytic domain HVY54_19635 PF02875 Mur ligase family, glutamate ligase domain HVY54_19635 PF08245 Mur ligase middle domain HVY54_19640 PF04101 Glycosyltransferase family 28 C-terminal domain HVY54_19640 PF03033 Glycosyltransferase family 28 N-terminal domain HVY54_19645 PF01098 Cell cycle protein HVY54_19650 PF08245 Mur ligase middle domain HVY54_19650 PF02875 Mur ligase family, glutamate ligase domain HVY54_19655 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HVY54_19655 PF00953 Glycosyl transferase family 4 HVY54_19660 PF08245 Mur ligase middle domain HVY54_19660 PF01225 Mur ligase family, catalytic domain HVY54_19660 PF02875 Mur ligase family, glutamate ligase domain HVY54_19665 PF08245 Mur ligase middle domain HVY54_19665 PF01225 Mur ligase family, catalytic domain HVY54_19665 PF02875 Mur ligase family, glutamate ligase domain HVY54_19670 PF03717 Penicillin-binding Protein dimerisation domain HVY54_19670 PF00905 Penicillin binding protein transpeptidase domain HVY54_19675 PF04999 Cell division protein FtsL HVY54_19680 PF01795 MraW methylase family HVY54_19685 PF02381 MraZ protein, putative antitoxin-like HVY54_19690 PF00356 Bacterial regulatory proteins, lacI family HVY54_19690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVY54_19700 PF10369 Small subunit of acetolactate synthase HVY54_19705 PF00205 Thiamine pyrophosphate enzyme, central domain HVY54_19705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_19705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVY54_19710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_19710 PF03466 LysR substrate binding domain HVY54_19715 PF08054 Leucine operon leader peptide HVY54_19720 PF00682 HMGL-like HVY54_19720 PF08502 LeuA allosteric (dimerisation) domain HVY54_19725 PF00180 Isocitrate/isopropylmalate dehydrogenase HVY54_19730 PF00330 Aconitase family (aconitate hydratase) HVY54_19735 PF00694 Aconitase C-terminal domain HVY54_19745 PF12793 Sugar transport-related sRNA regulator N-term HVY54_19745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVY54_19760 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_19765 PF00005 ABC transporter HVY54_19770 PF09335 SNARE associated Golgi protein HVY54_19775 PF12833 Helix-turn-helix domain HVY54_19775 PF02311 AraC-like ligand binding domain HVY54_19780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVY54_19785 PF02610 L-arabinose isomerase HVY54_19785 PF11762 L-arabinose isomerase C-terminal domain HVY54_19790 PF00596 Class II Aldolase and Adducin N-terminal domain HVY54_19795 PF03104 DNA polymerase family B, exonuclease domain HVY54_19795 PF00136 DNA polymerase family B HVY54_19800 PF18339 RapA N-terminal Tudor like domain 1 HVY54_19800 PF18337 RapA N-terminal Tudor like domain HVY54_19800 PF00176 SNF2 family N-terminal domain HVY54_19800 PF12137 RNA polymerase recycling family C-terminal HVY54_19800 PF00271 Helicase conserved C-terminal domain HVY54_19805 PF00849 RNA pseudouridylate synthase HVY54_19810 PF00226 DnaJ domain HVY54_19810 PF05099 Tellurite resistance protein TerB HVY54_19815 PF04453 LPS transport system D HVY54_19815 PF03968 OstA-like protein HVY54_19820 PF00639 PPIC-type PPIASE domain HVY54_19820 PF09312 SurA N-terminal domain HVY54_19825 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HVY54_19830 PF00398 Ribosomal RNA adenine dimethylase HVY54_19835 PF04379 ApaG domain HVY54_19840 PF00149 Calcineurin-like phosphoesterase HVY54_19855 PF00186 Dihydrofolate reductase HVY54_19860 PF02254 TrkA-N domain HVY54_19860 PF00999 Sodium/hydrogen exchanger family HVY54_19870 PF00083 Sugar (and other) transporter HVY54_19880 PF01494 FAD binding domain HVY54_19885 PF01012 Electron transfer flavoprotein domain HVY54_19885 PF00766 Electron transfer flavoprotein FAD-binding domain HVY54_19890 PF01012 Electron transfer flavoprotein domain HVY54_19895 PF02028 BCCT, betaine/carnitine/choline family transporter HVY54_19900 PF02770 Acyl-CoA dehydrogenase, middle domain HVY54_19900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVY54_19900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HVY54_19905 PF02515 CoA-transferase family III HVY54_19910 PF13193 AMP-binding enzyme C-terminal domain HVY54_19910 PF00501 AMP-binding enzyme HVY54_19915 PF00378 Enoyl-CoA hydratase/isomerase HVY54_19920 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_19925 PF07180 CaiF/GrlA transcriptional regulator HVY54_19930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HVY54_19930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HVY54_19930 PF02142 MGS-like domain HVY54_19935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HVY54_19935 PF00117 Glutamine amidotransferase class-I HVY54_19940 PF05173 Dihydrodipicolinate reductase, C-terminus HVY54_19940 PF01113 Dihydrodipicolinate reductase, N-terminus HVY54_19945 PF01156 Inosine-uridine preferring nucleoside hydrolase HVY54_19950 PF02401 LytB protein HVY54_19955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVY54_19960 PF01252 Signal peptidase (SPase) II HVY54_19965 PF00133 tRNA synthetases class I (I, L, M and V) HVY54_19965 PF06827 Zinc finger found in FPG and IleRS HVY54_19965 PF08264 Anticodon-binding domain of tRNA HVY54_19970 PF01687 Riboflavin kinase HVY54_19970 PF06574 FAD synthetase HVY54_19975 PF10837 Protein of unknown function (DUF2575) HVY54_19980 PF01649 Ribosomal protein S20 HVY54_19995 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_19995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_20000 PF13953 PapC C-terminal domain HVY54_20000 PF00577 Outer membrane usher protein HVY54_20000 PF13954 PapC N-terminal domain HVY54_20010 PF03466 LysR substrate binding domain HVY54_20010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_20015 PF06965 Na+/H+ antiporter 1 HVY54_20020 PF01848 Hok/gef family HVY54_20025 PF00684 DnaJ central domain HVY54_20025 PF00226 DnaJ domain HVY54_20025 PF01556 DnaJ C terminal domain HVY54_20030 PF00012 Hsp70 protein HVY54_20035 PF10807 Protein of unknown function (DUF2541) HVY54_20040 PF03981 Ubiquinol-cytochrome C chaperone HVY54_20040 PF13099 Domain of unknown function (DUF3944) HVY54_20045 PF01184 GPR1/FUN34/yaaH family HVY54_20050 PF00994 Probable molybdopterin binding domain HVY54_20055 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVY54_20060 PF01235 Sodium:alanine symporter family HVY54_20065 PF03883 Peroxide stress protein YaaA HVY54_20070 PF10697 Protein of unknown function (DUF2502) HVY54_20075 PF14821 Threonine synthase N terminus HVY54_20075 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_20080 PF08544 GHMP kinases C terminal HVY54_20080 PF00288 GHMP kinases N terminal domain HVY54_20085 PF00696 Amino acid kinase family HVY54_20085 PF13840 ACT domain HVY54_20085 PF03447 Homoserine dehydrogenase, NAD binding domain HVY54_20085 PF01842 ACT domain HVY54_20085 PF00742 Homoserine dehydrogenase HVY54_20090 PF08254 Threonine leader peptide HVY54_20095 PF00588 SpoU rRNA Methylase family HVY54_20105 PF00072 Response regulator receiver domain HVY54_20105 PF00486 Transcriptional regulatory protein, C terminal HVY54_20110 PF06123 Inner membrane protein CreD HVY54_20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_20115 PF00512 His Kinase A (phospho-acceptor) domain HVY54_20115 PF00672 HAMP domain HVY54_20120 PF00486 Transcriptional regulatory protein, C terminal HVY54_20120 PF00072 Response regulator receiver domain HVY54_20125 PF05981 CreA protein HVY54_20130 PF06445 GyrI-like small molecule binding domain HVY54_20130 PF12833 Helix-turn-helix domain HVY54_20135 PF00300 Histidine phosphatase superfamily (branch 1) HVY54_20140 PF01931 Protein of unknown function DUF84 HVY54_20145 PF01371 Trp repressor protein HVY54_20150 PF01464 Transglycosylase SLT domain HVY54_20150 PF14718 Soluble lytic murein transglycosylase L domain HVY54_20155 PF00005 ABC transporter HVY54_20155 PF12848 ABC transporter HVY54_20160 PF01381 Helix-turn-helix HVY54_20160 PF13521 AAA domain HVY54_20165 PF18073 Rubredoxin metal binding domain HVY54_20170 PF18429 Domain of unknown function (DUF5609) HVY54_20175 PF10144 Bacterial virulence factor haemolysin HVY54_20180 PF10437 Bacterial lipoate protein ligase C-terminus HVY54_20180 PF03099 Biotin/lipoate A/B protein ligase family HVY54_20190 PF01048 Phosphorylase superfamily HVY54_20195 PF01676 Metalloenzyme superfamily HVY54_20200 PF02885 Glycosyl transferase family, helical bundle domain HVY54_20200 PF00591 Glycosyl transferase family, a/b domain HVY54_20200 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HVY54_20205 PF01791 DeoC/LacD family aldolase HVY54_20210 PF11230 Protein of unknown function (DUF3029) HVY54_20215 PF04055 Radical SAM superfamily HVY54_20220 PF01026 TatD related DNase HVY54_20225 PF01734 Patatin-like phospholipase HVY54_20230 PF07043 Protein of unknown function (DUF1328) HVY54_20235 PF04972 BON domain HVY54_20240 PF00009 Elongation factor Tu GTP binding domain HVY54_20240 PF03144 Elongation factor Tu domain 2 HVY54_20240 PF16658 Class II release factor RF3, C-terminal domain HVY54_20245 PF13419 Haloacid dehalogenase-like hydrolase HVY54_20250 PF00583 Acetyltransferase (GNAT) family HVY54_20255 PF03603 DNA polymerase III psi subunit HVY54_20260 PF05175 Methyltransferase small domain HVY54_20260 PF08468 Methyltransferase small domain N-terminal HVY54_20280 PF07256 Protein of unknown function (DUF1435) HVY54_20285 PF06276 Ferric iron reductase FhuF-like transporter HVY54_20285 PF11575 FhuF 2Fe-2S C-terminal domain HVY54_20290 PF00196 Bacterial regulatory proteins, luxR family HVY54_20295 PF00196 Bacterial regulatory proteins, luxR family HVY54_20300 PF06738 Putative threonine/serine exporter HVY54_20305 PF12821 Threonine/Serine exporter, ThrE HVY54_20310 PF17948 DnaT DNA-binding domain HVY54_20315 PF01695 IstB-like ATP binding protein HVY54_20320 PF10696 Protein of unknown function (DUF2501) HVY54_20325 PF00884 Sulfatase HVY54_20330 PF00107 Zinc-binding dehydrogenase HVY54_20330 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_20335 PF00392 Bacterial regulatory proteins, gntR family HVY54_20335 PF07729 FCD domain HVY54_20340 PF07690 Major Facilitator Superfamily HVY54_20345 PF02203 Tar ligand binding domain homologue HVY54_20345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVY54_20345 PF00672 HAMP domain HVY54_20355 PF02554 Carbon starvation protein CstA HVY54_20355 PF13722 5TM C-terminal transporter carbon starvation CstA HVY54_20360 PF04328 Selenoprotein, putative HVY54_20365 PF02492 CobW/HypB/UreG, nucleotide-binding domain HVY54_20365 PF07683 Cobalamin synthesis protein cobW C-terminal domain HVY54_20375 PF04851 Type III restriction enzyme, res subunit HVY54_20375 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HVY54_20375 PF00271 Helicase conserved C-terminal domain HVY54_20375 PF08463 EcoEI R protein C-terminal HVY54_20380 PF12161 HsdM N-terminal domain HVY54_20380 PF02384 N-6 DNA Methylase HVY54_20385 PF01420 Type I restriction modification DNA specificity domain HVY54_20390 PF08845 Toxin SymE, type I toxin-antitoxin system HVY54_20400 PF06568 Domain of unknown function (DUF1127) HVY54_20405 PF00155 Aminotransferase class I and II HVY54_20405 PF00392 Bacterial regulatory proteins, gntR family HVY54_20410 PF04754 Putative transposase, YhgA-like HVY54_20415 PF07690 Major Facilitator Superfamily HVY54_20420 PF04286 Protein of unknown function (DUF445) HVY54_20425 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HVY54_20430 PF01869 BadF/BadG/BcrA/BcrD ATPase family HVY54_20435 PF11823 Protein of unknown function (DUF3343) HVY54_20445 PF06977 SdiA-regulated HVY54_20450 PF06779 Uncharacterised MFS-type transporter YbfB HVY54_20460 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family HVY54_20465 PF07670 Nucleoside recognition HVY54_20470 PF07670 Nucleoside recognition HVY54_20475 PF01979 Amidohydrolase family HVY54_20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_20480 PF03466 LysR substrate binding domain HVY54_20485 PF04965 Gene 25-like lysozyme HVY54_20495 PF10887 Protein of unknown function (DUF2686) HVY54_20500 PF07729 FCD domain HVY54_20500 PF00392 Bacterial regulatory proteins, gntR family HVY54_20505 PF08125 Mannitol dehydrogenase C-terminal domain HVY54_20505 PF01232 Mannitol dehydrogenase Rossmann domain HVY54_20510 PF03786 D-mannonate dehydratase (UxuA) HVY54_20520 PF09160 FimH, mannose binding HVY54_20520 PF00419 Fimbrial protein HVY54_20530 PF00419 Fimbrial protein HVY54_20535 PF13954 PapC N-terminal domain HVY54_20535 PF00577 Outer membrane usher protein HVY54_20535 PF13953 PapC C-terminal domain HVY54_20540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_20540 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_20545 PF00419 Fimbrial protein HVY54_20550 PF00419 Fimbrial protein HVY54_20555 PF00589 Phage integrase family HVY54_20560 PF00589 Phage integrase family HVY54_20565 PF06178 Oligogalacturonate-specific porin protein (KdgM) HVY54_20575 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase HVY54_20625 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HVY54_20625 PF04616 Glycosyl hydrolases family 43 HVY54_20640 PF02264 LamB porin HVY54_20675 PF00589 Phage integrase family HVY54_20675 PF13356 Arm DNA-binding domain HVY54_20685 PF13505 Outer membrane protein beta-barrel domain HVY54_20690 PF00884 Sulfatase HVY54_20695 PF00589 Phage integrase family HVY54_20695 PF13356 Arm DNA-binding domain HVY54_20705 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_20705 PF00107 Zinc-binding dehydrogenase HVY54_20710 PF01202 Shikimate kinase HVY54_20715 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_20715 PF00107 Zinc-binding dehydrogenase HVY54_20720 PF00106 short chain dehydrogenase HVY54_20725 PF02447 GntP family permease HVY54_20730 PF00356 Bacterial regulatory proteins, lacI family HVY54_20735 PF05872 Bacterial protein of unknown function (DUF853) HVY54_20740 PF03739 Lipopolysaccharide export system permease LptF/LptG HVY54_20745 PF03739 Lipopolysaccharide export system permease LptF/LptG HVY54_20750 PF00883 Cytosol aminopeptidase family, catalytic domain HVY54_20750 PF02789 Cytosol aminopeptidase family, N-terminal domain HVY54_20755 PF04364 DNA polymerase III chi subunit, HolC HVY54_20760 PF08264 Anticodon-binding domain of tRNA HVY54_20760 PF00133 tRNA synthetases class I (I, L, M and V) HVY54_20760 PF10458 Valyl tRNA synthetase tRNA binding arm HVY54_20765 PF05987 Bacterial protein of unknown function (DUF898) HVY54_20770 PF00583 Acetyltransferase (GNAT) family HVY54_20775 PF06877 Regulator of ribonuclease activity B HVY54_20780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVY54_20780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVY54_20790 PF04074 YhcH/YjgK/YiaL HVY54_20795 PF00440 Bacterial regulatory proteins, tetR family HVY54_20805 PF01042 Endoribonuclease L-PSP HVY54_20810 PF08052 PyrBI operon leader peptide HVY54_20815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVY54_20815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVY54_20820 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HVY54_20820 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HVY54_20825 PF01042 Endoribonuclease L-PSP HVY54_20830 PF00690 Cation transporter/ATPase, N-terminus HVY54_20830 PF00689 Cation transporting ATPase, C-terminus HVY54_20835 PF17059 MgtA leader peptide HVY54_20840 PF00356 Bacterial regulatory proteins, lacI family HVY54_20845 PF02378 Phosphotransferase system, EIIC HVY54_20845 PF00367 phosphotransferase system, EIIB HVY54_20850 PF00128 Alpha amylase, catalytic domain HVY54_20850 PF11941 Domain of unknown function (DUF3459) HVY54_20855 PF13597 Anaerobic ribonucleoside-triphosphate reductase HVY54_20855 PF03477 ATP cone domain HVY54_20865 PF04221 RelB antitoxin HVY54_20870 PF07361 Cytochrome b562 HVY54_20875 PF01523 Putative modulator of DNA gyrase HVY54_20880 PF04751 Protein of unknown function (DUF615) HVY54_20885 PF01225 Mur ligase family, catalytic domain HVY54_20885 PF02875 Mur ligase family, glutamate ligase domain HVY54_20885 PF08245 Mur ligase middle domain HVY54_20890 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HVY54_20895 PF02653 Branched-chain amino acid transport system / permease component HVY54_20900 PF02653 Branched-chain amino acid transport system / permease component HVY54_20905 PF00005 ABC transporter HVY54_20910 PF13407 Periplasmic binding protein domain HVY54_20915 PF00719 Inorganic pyrophosphatase HVY54_20920 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HVY54_20925 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HVY54_20930 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HVY54_20935 PF04357 TamB, inner membrane protein subunit of TAM complex HVY54_20940 PF01103 Surface antigen HVY54_20940 PF17243 POTRA domain TamA domain 1 HVY54_20940 PF07244 Surface antigen variable number repeat HVY54_20945 PF01625 Peptide methionine sulfoxide reductase HVY54_20950 PF03471 Transporter associated domain HVY54_20950 PF01595 Cyclin M transmembrane N-terminal domain HVY54_20950 PF00571 CBS domain HVY54_20955 PF06526 Protein of unknown function (DUF1107) HVY54_20960 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HVY54_20970 PF00459 Inositol monophosphatase family HVY54_20975 PF00149 Calcineurin-like phosphoesterase HVY54_20975 PF02872 5'-nucleotidase, C-terminal domain HVY54_20980 PF01638 HxlR-like helix-turn-helix HVY54_20985 PF05368 NmrA-like family HVY54_20990 PF00892 EamA-like transporter family HVY54_20995 PF04405 Domain of Unknown function (DUF542) HVY54_20995 PF01814 Hemerythrin HHE cation binding domain HVY54_21000 PF00324 Amino acid permease HVY54_21005 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HVY54_21005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVY54_21010 PF04225 Opacity-associated protein A LysM-like domain HVY54_21010 PF08525 Opacity-associated protein A N-terminal motif HVY54_21020 PF07282 Putative transposase DNA-binding domain HVY54_21020 PF12323 Helix-turn-helix domain HVY54_21020 PF01385 Probable transposase HVY54_21025 PF01797 Transposase IS200 like HVY54_21035 PF10887 Protein of unknown function (DUF2686) HVY54_21040 PF03948 Ribosomal protein L9, C-terminal domain HVY54_21040 PF01281 Ribosomal protein L9, N-terminal domain HVY54_21045 PF01084 Ribosomal protein S18 HVY54_21050 PF00436 Single-strand binding protein family HVY54_21055 PF01250 Ribosomal protein S6 HVY54_21060 PF07338 Protein of unknown function (DUF1471) HVY54_21065 PF00596 Class II Aldolase and Adducin N-terminal domain HVY54_21070 PF01261 Xylose isomerase-like TIM barrel HVY54_21075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HVY54_21080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_21085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_21090 PF03611 PTS system sugar-specific permease component HVY54_21100 PF00455 DeoR C terminal sensor domain HVY54_21100 PF08220 DeoR-like helix-turn-helix domain HVY54_21105 PF00326 Prolyl oligopeptidase family HVY54_21110 PF07338 Protein of unknown function (DUF1471) HVY54_21115 PF07338 Protein of unknown function (DUF1471) HVY54_21120 PF02770 Acyl-CoA dehydrogenase, middle domain HVY54_21120 PF18158 Adaptive response protein AidB N-terminal domain HVY54_21120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVY54_21125 PF03738 Glutathionylspermidine synthase preATP-grasp HVY54_21130 PF06693 Protein of unknown function (DUF1190) HVY54_21135 PF03994 Domain of Unknown Function (DUF350) HVY54_21140 PF10679 Protein of unknown function (DUF2491) HVY54_21145 PF04012 PspA/IM30 family HVY54_21150 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) HVY54_21155 PF00588 SpoU rRNA Methylase family HVY54_21155 PF08032 RNA 2'-O ribose methyltransferase substrate binding HVY54_21160 PF08206 Ribonuclease B OB domain HVY54_21160 PF17876 Cold shock domain HVY54_21160 PF00575 S1 RNA binding domain HVY54_21160 PF00773 RNB domain HVY54_21160 PF08461 Ribonuclease R winged-helix domain HVY54_21165 PF02082 Transcriptional regulator HVY54_21170 PF00709 Adenylosuccinate synthetase HVY54_21175 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HVY54_21180 PF01145 SPFH domain / Band 7 family HVY54_21185 PF01145 SPFH domain / Band 7 family HVY54_21185 PF12221 Bacterial membrane protein N terminal HVY54_21190 PF01926 50S ribosome-binding GTPase HVY54_21190 PF13167 GTP-binding GTPase N-terminal HVY54_21190 PF16360 GTP-binding GTPase Middle Region HVY54_21195 PF17209 Hfq protein HVY54_21205 PF08676 MutL C terminal dimerisation domain HVY54_21205 PF01119 DNA mismatch repair protein, C-terminal domain HVY54_21210 PF01520 N-acetylmuramoyl-L-alanine amidase HVY54_21215 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HVY54_21220 PF03853 YjeF-related protein N-terminus HVY54_21220 PF01256 Carbohydrate kinase HVY54_21225 PF08331 Domain of unknown function (DUF1730) HVY54_21250 PF00929 Exonuclease HVY54_21255 PF03193 RsgA GTPase HVY54_21260 PF02666 Phosphatidylserine decarboxylase HVY54_21265 PF00924 Mechanosensitive ion channel HVY54_21265 PF12794 Mechanosensitive ion channel inner membrane domain 1 HVY54_21265 PF12795 Mechanosensitive ion channel porin domain HVY54_21270 PF10840 Protein of unknown function (DUF2645) HVY54_21275 PF13520 Amino acid permease HVY54_21280 PF00152 tRNA synthetases class II (D, K and N) HVY54_21285 PF02910 Fumarate reductase flavoprotein C-term HVY54_21285 PF00890 FAD binding domain HVY54_21290 PF13085 2Fe-2S iron-sulfur cluster binding domain HVY54_21290 PF13183 4Fe-4S dicluster domain HVY54_21295 PF02300 Fumarate reductase subunit C HVY54_21300 PF02313 Fumarate reductase subunit D HVY54_21305 PF00144 Beta-lactamase HVY54_21310 PF08212 Lipocalin-like domain HVY54_21315 PF00893 Small Multidrug Resistance protein HVY54_21320 PF08085 Entericidin EcnA/B family HVY54_21325 PF08085 Entericidin EcnA/B family HVY54_21330 PF01132 Elongation factor P (EF-P) OB domain HVY54_21330 PF09285 Elongation factor P, C-terminal HVY54_21330 PF08207 Elongation factor P (EF-P) KOW-like domain HVY54_21335 PF04055 Radical SAM superfamily HVY54_21340 PF15922 YjeJ-like HVY54_21345 PF13698 Domain of unknown function (DUF4156) HVY54_21350 PF00118 TCP-1/cpn60 chaperonin family HVY54_21355 PF00166 Chaperonin 10 Kd subunit HVY54_21360 PF13520 Amino acid permease HVY54_21365 PF04186 FxsA cytoplasmic membrane protein HVY54_21370 PF10415 Fumarase C C-terminus HVY54_21370 PF00206 Lyase HVY54_21375 PF03605 Anaerobic c4-dicarboxylate membrane transporter HVY54_21380 PF03091 CutA1 divalent ion tolerance protein HVY54_21385 PF02683 Cytochrome C biogenesis protein transmembrane region HVY54_21385 PF11412 Disulphide bond corrector protein DsbC HVY54_21400 PF13356 Arm DNA-binding domain HVY54_21400 PF00589 Phage integrase family HVY54_21410 PF07290 Protein of unknown function (DUF1449) HVY54_21415 PF08971 Glycogen synthesis protein HVY54_21425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_21425 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_21450 PF13361 UvrD-like helicase C-terminal domain HVY54_21450 PF00580 UvrD/REP helicase N-terminal domain HVY54_21455 PF00271 Helicase conserved C-terminal domain HVY54_21455 PF00270 DEAD/DEAH box helicase HVY54_21455 PF09369 Domain of unknown function (DUF1998) HVY54_21465 PF00271 Helicase conserved C-terminal domain HVY54_21465 PF12137 RNA polymerase recycling family C-terminal HVY54_21465 PF00176 SNF2 family N-terminal domain HVY54_21465 PF18339 RapA N-terminal Tudor like domain 1 HVY54_21465 PF18337 RapA N-terminal Tudor like domain HVY54_21475 PF01609 Transposase DDE domain HVY54_21475 PF05598 Transposase domain (DUF772) HVY54_21485 PF13505 Outer membrane protein beta-barrel domain HVY54_21530 PF00816 H-NS histone family HVY54_21565 PF01926 50S ribosome-binding GTPase HVY54_21575 PF06006 Bacterial protein of unknown function (DUF905) HVY54_21580 PF06067 Domain of unknown function (DUF932) HVY54_21585 PF03230 Antirestriction protein HVY54_21590 PF04002 RadC-like JAB domain HVY54_21595 PF06174 Protein of unknown function (DUF987) HVY54_21600 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HVY54_21605 PF06755 CbtA_toxin of type IV toxin-antitoxin system HVY54_21625 PF18500 CadC C-terminal domain 1 HVY54_21625 PF00486 Transcriptional regulatory protein, C terminal HVY54_21630 PF13520 Amino acid permease HVY54_21635 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVY54_21635 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVY54_21635 PF01276 Orn/Lys/Arg decarboxylase, major domain HVY54_21640 PF00854 POT family HVY54_21645 PF01336 OB-fold nucleic acid binding domain HVY54_21645 PF00152 tRNA synthetases class II (D, K and N) HVY54_21650 PF10753 Toxin GhoT_OrtT HVY54_21655 PF11080 Endoribonuclease GhoS HVY54_21660 PF14542 GCN5-related N-acetyl-transferase HVY54_21665 PF06902 Divergent 4Fe-4S mono-cluster HVY54_21670 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HVY54_21670 PF17203 Single cache domain 3 HVY54_21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_21670 PF00989 PAS fold HVY54_21675 PF00072 Response regulator receiver domain HVY54_21680 PF03605 Anaerobic c4-dicarboxylate membrane transporter HVY54_21685 PF05681 Fumarate hydratase (Fumerase) HVY54_21685 PF05683 Fumarase C-terminus HVY54_21690 PF09997 Predicted membrane protein (DUF2238) HVY54_21700 PF11975 Family 4 glycosyl hydrolase C-terminal domain HVY54_21700 PF02056 Family 4 glycosyl hydrolase HVY54_21705 PF12833 Helix-turn-helix domain HVY54_21710 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVY54_21710 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVY54_21710 PF01276 Orn/Lys/Arg decarboxylase, major domain HVY54_21715 PF12833 Helix-turn-helix domain HVY54_21720 PF13520 Amino acid permease HVY54_21725 PF00884 Sulfatase HVY54_21725 PF08019 Phosphoethanolamine transferase EptA/EptB HVY54_21730 PF00486 Transcriptional regulatory protein, C terminal HVY54_21730 PF00072 Response regulator receiver domain HVY54_21735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_21735 PF00512 His Kinase A (phospho-acceptor) domain HVY54_21745 PF00083 Sugar (and other) transporter HVY54_21745 PF08946 Osmosensory transporter coiled coil HVY54_21750 PF13990 YjcZ-like protein HVY54_21755 PF00350 Dynamin family HVY54_21760 PF08274 PhnA Zinc-Ribbon HVY54_21760 PF03831 PhnA domain HVY54_21765 PF06983 3-demethylubiquinone-9 3-methyltransferase HVY54_21770 PF00005 ABC transporter HVY54_21780 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_21785 PF00392 Bacterial regulatory proteins, gntR family HVY54_21785 PF07702 UTRA domain HVY54_21790 PF06754 Phosphonate metabolism protein PhnG HVY54_21795 PF05845 Bacterial phosphonate metabolism protein (PhnH) HVY54_21800 PF05861 Bacterial phosphonate metabolism protein (PhnI) HVY54_21805 PF06007 Phosphonate metabolism protein PhnJ HVY54_21810 PF00005 ABC transporter HVY54_21815 PF00005 ABC transporter HVY54_21820 PF07969 Amidohydrolase family HVY54_21830 PF00583 Acetyltransferase (GNAT) family HVY54_21835 PF12706 Beta-lactamase superfamily domain HVY54_21845 PF13188 PAS domain HVY54_21845 PF00072 Response regulator receiver domain HVY54_21845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_21845 PF08448 PAS fold HVY54_21845 PF00512 His Kinase A (phospho-acceptor) domain HVY54_21850 PF00005 ABC transporter HVY54_21855 PF02653 Branched-chain amino acid transport system / permease component HVY54_21860 PF13407 Periplasmic binding protein domain HVY54_21870 PF01116 Fructose-bisphosphate aldolase class-II HVY54_21875 PF00294 pfkB family carbohydrate kinase HVY54_21880 PF00486 Transcriptional regulatory protein, C terminal HVY54_21880 PF00072 Response regulator receiver domain HVY54_21885 PF14864 Alkyl sulfatase C-terminal HVY54_21885 PF14863 Alkyl sulfatase dimerisation HVY54_21885 PF00753 Metallo-beta-lactamase superfamily HVY54_21890 PF17090 Uncharacterised protein family HVY54_21895 PF00529 HlyD membrane-fusion protein of T1SS HVY54_21895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVY54_21900 PF04632 Fusaric acid resistance protein family HVY54_21915 PF08238 Sel1 repeat HVY54_21920 PF00375 Sodium:dicarboxylate symporter family HVY54_21930 PF03918 Cytochrome C biogenesis protein HVY54_21935 PF01578 Cytochrome C assembly protein HVY54_21935 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HVY54_21940 PF03916 Polysulphide reductase, NrfD HVY54_21945 PF00037 4Fe-4S binding domain HVY54_21945 PF13247 4Fe-4S dicluster domain HVY54_21950 PF13435 Cytochrome c554 and c-prime HVY54_21950 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HVY54_21955 PF02335 Cytochrome c552 HVY54_21960 PF00501 AMP-binding enzyme HVY54_21960 PF13193 AMP-binding enzyme C-terminal domain HVY54_21960 PF16177 Acetyl-coenzyme A synthetase N-terminus HVY54_21965 PF04341 Protein of unknown function, DUF485 HVY54_21970 PF00474 Sodium:solute symporter family HVY54_21975 PF00805 Pentapeptide repeats (8 copies) HVY54_21980 PF00999 Sodium/hydrogen exchanger family HVY54_21985 PF00860 Permease family HVY54_21990 PF00376 MerR family regulatory protein HVY54_21990 PF09278 MerR, DNA binding HVY54_21995 PF12833 Helix-turn-helix domain HVY54_22000 PF12792 CSS motif domain associated with EAL HVY54_22000 PF00563 EAL domain HVY54_22005 PF15940 Family of unknown function HVY54_22010 PF00436 Single-strand binding protein family HVY54_22015 PF00005 ABC transporter HVY54_22015 PF17755 UvrA DNA-binding domain HVY54_22015 PF17760 UvrA interaction domain HVY54_22020 PF04237 YjbR HVY54_22025 PF01894 Uncharacterised protein family UPF0047 HVY54_22030 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HVY54_22040 PF00155 Aminotransferase class I and II HVY54_22050 PF04973 Nicotinamide mononucleotide transporter HVY54_22055 PF00842 Alanine racemase, C-terminal domain HVY54_22055 PF01168 Alanine racemase, N-terminal domain HVY54_22060 PF00772 DnaB-like helicase N terminal domain HVY54_22060 PF03796 DnaB-like helicase C terminal domain HVY54_22065 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_22065 PF00107 Zinc-binding dehydrogenase HVY54_22070 PF09583 Phage shock protein G (Phageshock_PspG) HVY54_22075 PF01207 Dihydrouridine synthase (Dus) HVY54_22080 PF10897 Protein of unknown function (DUF2713) HVY54_22085 PF01475 Ferric uptake regulator family HVY54_22090 PF05532 CsbD-like HVY54_22095 PF01554 MatE HVY54_22100 PF01726 LexA DNA binding domain HVY54_22100 PF00717 Peptidase S24-like HVY54_22105 PF01219 Prokaryotic diacylglycerol kinase HVY54_22110 PF01553 Acyltransferase HVY54_22115 PF01040 UbiA prenyltransferase family HVY54_22120 PF04345 Chorismate lyase HVY54_22130 PF07148 Maltose operon periplasmic protein precursor (MalM) HVY54_22135 PF02264 LamB porin HVY54_22140 PF17912 MalK OB fold domain HVY54_22140 PF00005 ABC transporter HVY54_22145 PF01547 Bacterial extracellular solute-binding protein HVY54_22150 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_22150 PF14785 Maltose transport system permease protein MalF P2 domain HVY54_22155 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_22160 PF00083 Sugar (and other) transporter HVY54_22165 PF06146 Phosphate-starvation-inducible E HVY54_22175 PF17089 Uncharacterised protein family HVY54_22180 PF06082 Exopolysaccharide biosynthesis protein YbjH HVY54_22185 PF06251 Capsule biosynthesis GfcC HVY54_22190 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HVY54_22195 PF11106 Exopolysaccharide production protein YjbE HVY54_22200 PF00342 Phosphoglucose isomerase HVY54_22205 PF00696 Amino acid kinase family HVY54_22205 PF01842 ACT domain HVY54_22210 PF11656 YjbD family (DUF3811) HVY54_22215 PF01479 S4 domain HVY54_22215 PF00849 RNA pseudouridylate synthase HVY54_22220 PF13936 Helix-turn-helix domain HVY54_22220 PF04198 Putative sugar-binding domain HVY54_22225 PF00106 short chain dehydrogenase HVY54_22230 PF03610 PTS system fructose IIA component HVY54_22235 PF03830 PTS system sorbose subfamily IIB component HVY54_22240 PF03609 PTS system sorbose-specific iic component HVY54_22245 PF03613 PTS system mannose/fructose/sorbose family IID component HVY54_22250 PF00107 Zinc-binding dehydrogenase HVY54_22250 PF08240 Alcohol dehydrogenase GroES-like domain HVY54_22255 PF03575 Peptidase family S51 HVY54_22260 PF02690 Na+/Pi-cotransporter HVY54_22265 PF02965 Vitamin B12 dependent methionine synthase, activation domain HVY54_22265 PF00809 Pterin binding enzyme HVY54_22265 PF02607 B12 binding domain HVY54_22265 PF02310 B12 binding domain HVY54_22265 PF02574 Homocysteine S-methyltransferase HVY54_22270 PF09339 IclR helix-turn-helix domain HVY54_22270 PF01614 Bacterial transcriptional regulator HVY54_22275 PF07906 ShET2 enterotoxin, N-terminal region HVY54_22280 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HVY54_22285 PF00463 Isocitrate lyase family HVY54_22290 PF01274 Malate synthase HVY54_22295 PF04204 Homoserine O-succinyltransferase HVY54_22300 PF13673 Acetyltransferase (GNAT) domain HVY54_22325 PF02142 MGS-like domain HVY54_22325 PF01808 AICARFT/IMPCHase bienzyme HVY54_22330 PF02843 Phosphoribosylglycinamide synthetase, C domain HVY54_22330 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HVY54_22330 PF02844 Phosphoribosylglycinamide synthetase, N domain HVY54_22335 PF02954 Bacterial regulatory protein, Fis family HVY54_22335 PF00072 Response regulator receiver domain HVY54_22335 PF00158 Sigma-54 interaction domain HVY54_22340 PF00512 His Kinase A (phospho-acceptor) domain HVY54_22340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_22345 PF13801 Heavy-metal resistance HVY54_22350 PF07356 Protein of unknown function (DUF1481) HVY54_22355 PF00216 Bacterial DNA-binding protein HVY54_22360 PF04222 Protein of unknown function (DUF416) HVY54_22365 PF04493 Endonuclease V HVY54_22370 PF01208 Uroporphyrinogen decarboxylase (URO-D) HVY54_22375 PF00293 NUDIX domain HVY54_22375 PF09297 NADH pyrophosphatase zinc ribbon domain HVY54_22380 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HVY54_22385 PF01964 Radical SAM ThiC family HVY54_22385 PF13667 ThiC-associated domain HVY54_22390 PF02581 Thiamine monophosphate synthase HVY54_22395 PF00899 ThiF family HVY54_22400 PF02597 ThiS family HVY54_22405 PF05690 Thiazole biosynthesis protein ThiG HVY54_22410 PF06968 Biotin and Thiamin Synthesis associated domain HVY54_22410 PF04055 Radical SAM superfamily HVY54_22420 PF00623 RNA polymerase Rpb1, domain 2 HVY54_22420 PF04983 RNA polymerase Rpb1, domain 3 HVY54_22420 PF05000 RNA polymerase Rpb1, domain 4 HVY54_22420 PF04997 RNA polymerase Rpb1, domain 1 HVY54_22420 PF04998 RNA polymerase Rpb1, domain 5 HVY54_22425 PF04560 RNA polymerase Rpb2, domain 7 HVY54_22425 PF04565 RNA polymerase Rpb2, domain 3 HVY54_22425 PF10385 RNA polymerase beta subunit external 1 domain HVY54_22425 PF04561 RNA polymerase Rpb2, domain 2 HVY54_22425 PF04563 RNA polymerase beta subunit HVY54_22425 PF00562 RNA polymerase Rpb2, domain 6 HVY54_22430 PF00542 Ribosomal protein L7/L12 C-terminal domain HVY54_22430 PF16320 Ribosomal protein L7/L12 dimerisation domain HVY54_22435 PF00466 Ribosomal protein L10 HVY54_22440 PF00687 Ribosomal protein L1p/L10e family HVY54_22445 PF00298 Ribosomal protein L11, RNA binding domain HVY54_22445 PF03946 Ribosomal protein L11, N-terminal domain HVY54_22450 PF00467 KOW motif HVY54_22450 PF02357 Transcription termination factor nusG HVY54_22455 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HVY54_22460 PF03143 Elongation factor Tu C-terminal domain HVY54_22460 PF03144 Elongation factor Tu domain 2 HVY54_22460 PF00009 Elongation factor Tu GTP binding domain HVY54_22485 PF00485 Phosphoribulokinase / Uridine kinase family HVY54_22490 PF02237 Biotin protein ligase C terminal domain HVY54_22490 PF03099 Biotin/lipoate A/B protein ligase family HVY54_22490 PF08279 HTH domain HVY54_22495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HVY54_22495 PF01565 FAD binding domain HVY54_22525 PF01177 Asp/Glu/Hydantoin racemase HVY54_22530 PF07715 TonB-dependent Receptor Plug Domain HVY54_22530 PF00593 TonB dependent receptor HVY54_22535 PF05958 tRNA (Uracil-5-)-methyltransferase HVY54_22540 PF07226 Protein of unknown function (DUF1422) HVY54_22545 PF00440 Bacterial regulatory proteins, tetR family HVY54_22550 PF07690 Major Facilitator Superfamily HVY54_22555 PF07687 Peptidase dimerisation domain HVY54_22555 PF01546 Peptidase family M20/M25/M40 HVY54_22560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVY54_22560 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVY54_22565 PF03466 LysR substrate binding domain HVY54_22565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_22570 PF14698 Argininosuccinate lyase C-terminal HVY54_22570 PF00206 Lyase HVY54_22575 PF00696 Amino acid kinase family HVY54_22580 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVY54_22580 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVY54_22585 PF01546 Peptidase family M20/M25/M40 HVY54_22585 PF07687 Peptidase dimerisation domain HVY54_22590 PF00311 Phosphoenolpyruvate carboxylase HVY54_22595 PF00884 Sulfatase HVY54_22600 PF12833 Helix-turn-helix domain HVY54_22605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_22610 PF04055 Radical SAM superfamily HVY54_22615 PF01228 Glycine radical HVY54_22615 PF02901 Pyruvate formate lyase-like HVY54_22620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_22630 PF05524 PEP-utilising enzyme, N-terminal HVY54_22630 PF00391 PEP-utilising enzyme, mobile domain HVY54_22630 PF00381 PTS HPr component phosphorylation site HVY54_22630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_22630 PF02896 PEP-utilising enzyme, TIM barrel domain HVY54_22635 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVY54_22640 PF00465 Iron-containing alcohol dehydrogenase HVY54_22645 PF06940 Domain of unknown function (DUF1287) HVY54_22650 PF00892 EamA-like transporter family HVY54_22655 PF00141 Peroxidase HVY54_22660 PF02219 Methylenetetrahydrofolate reductase HVY54_22670 PF03447 Homoserine dehydrogenase, NAD binding domain HVY54_22670 PF00742 Homoserine dehydrogenase HVY54_22670 PF00696 Amino acid kinase family HVY54_22675 PF01053 Cys/Met metabolism PLP-dependent enzyme HVY54_22680 PF01340 Met Apo-repressor, MetJ HVY54_22685 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HVY54_22705 PF01197 Ribosomal protein L31 HVY54_22710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HVY54_22710 PF17764 3′ DNA-binding domain (3′BD) HVY54_22710 PF00271 Helicase conserved C-terminal domain HVY54_22710 PF00270 DEAD/DEAH box helicase HVY54_22710 PF18074 Primosomal protein N C-terminal domain HVY54_22715 PF00356 Bacterial regulatory proteins, lacI family HVY54_22720 PF05036 Sporulation related domain HVY54_22725 PF00227 Proteasome subunit HVY54_22730 PF00004 ATPase family associated with various cellular activities (AAA) HVY54_22730 PF07724 AAA domain (Cdc48 subfamily) HVY54_22730 PF10431 C-terminal, D2-small domain, of ClpB protein HVY54_22735 PF01040 UbiA prenyltransferase family HVY54_22740 PF03737 Aldolase/RraA HVY54_22755 PF06005 Cell division protein ZapB HVY54_22760 PF00230 Major intrinsic protein HVY54_22765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVY54_22765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVY54_22770 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HVY54_22775 PF00970 Oxidoreductase FAD-binding domain HVY54_22775 PF00175 Oxidoreductase NAD-binding domain HVY54_22780 PF00582 Universal stress protein family HVY54_22785 PF04175 Protein of unknown function (DUF406) HVY54_22790 PF05656 Protein of unknown function (DUF805) HVY54_22795 PF07305 Protein of unknown function (DUF1454) HVY54_22800 PF00121 Triosephosphate isomerase HVY54_22805 PF02611 CDP-diacylglycerol pyrophosphatase HVY54_22815 PF00365 Phosphofructokinase HVY54_22820 PF16916 Dimerisation domain of Zinc Transporter HVY54_22820 PF01545 Cation efflux family HVY54_22825 PF07813 LTXXQ motif family protein HVY54_22830 PF00072 Response regulator receiver domain HVY54_22830 PF00486 Transcriptional regulatory protein, C terminal HVY54_22835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_22835 PF00512 His Kinase A (phospho-acceptor) domain HVY54_22835 PF00672 HAMP domain HVY54_22835 PF16527 Two-component sensor protein CpxA, periplasmic domain HVY54_22840 PF03473 MOSC domain HVY54_22840 PF03475 3-alpha domain HVY54_22845 PF03812 2-keto-3-deoxygluconate permease HVY54_22850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HVY54_22850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HVY54_22855 PF06379 L-rhamnose-proton symport protein (RhaT) HVY54_22860 PF12833 Helix-turn-helix domain HVY54_22860 PF02311 AraC-like ligand binding domain HVY54_22865 PF02311 AraC-like ligand binding domain HVY54_22865 PF12833 Helix-turn-helix domain HVY54_22870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVY54_22870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVY54_22875 PF06134 L-rhamnose isomerase (RhaA) HVY54_22880 PF00596 Class II Aldolase and Adducin N-terminal domain HVY54_22885 PF05336 L-rhamnose mutarotase HVY54_22895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_22900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVY54_22900 PF02378 Phosphotransferase system, EIIC HVY54_22905 PF05343 M42 glutamyl aminopeptidase HVY54_22910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVY54_22910 PF08279 HTH domain HVY54_22915 PF12889 Protein of unknown function (DUF3829) HVY54_22920 PF02634 FdhD/NarQ family HVY54_22930 PF09163 Formate dehydrogenase N, transmembrane HVY54_22930 PF13247 4Fe-4S dicluster domain HVY54_22935 PF01292 Prokaryotic cytochrome b561 HVY54_22940 PF04216 Protein involved in formate dehydrogenase formation HVY54_22950 PF01402 Ribbon-helix-helix protein, copG family HVY54_22960 PF09500 Putative thioesterase (yiiD_Cterm) HVY54_22960 PF00583 Acetyltransferase (GNAT) family HVY54_22965 PF02580 D-Tyr-tRNA(Tyr) deacylase HVY54_22970 PF03631 Virulence factor BrkB HVY54_22975 PF13419 Haloacid dehalogenase-like hydrolase HVY54_22980 PF08220 DeoR-like helix-turn-helix domain HVY54_22980 PF00455 DeoR C terminal sensor domain HVY54_22985 PF00294 pfkB family carbohydrate kinase HVY54_22990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVY54_22990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HVY54_22995 PF01791 DeoC/LacD family aldolase HVY54_23005 PF01263 Aldose 1-epimerase HVY54_23015 PF01055 Glycosyl hydrolases family 31 HVY54_23030 PF06178 Oligogalacturonate-specific porin protein (KdgM) HVY54_23035 PF07690 Major Facilitator Superfamily HVY54_23040 PF01261 Xylose isomerase-like TIM barrel HVY54_23045 PF07702 UTRA domain HVY54_23045 PF00392 Bacterial regulatory proteins, gntR family HVY54_23055 PF00120 Glutamine synthetase, catalytic domain HVY54_23055 PF03951 Glutamine synthetase, beta-Grasp domain HVY54_23060 PF00989 PAS fold HVY54_23060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVY54_23060 PF00512 His Kinase A (phospho-acceptor) domain HVY54_23065 PF00072 Response regulator receiver domain HVY54_23065 PF02954 Bacterial regulatory protein, Fis family HVY54_23065 PF00158 Sigma-54 interaction domain HVY54_23075 PF06969 HemN C-terminal domain HVY54_23075 PF04055 Radical SAM superfamily HVY54_23080 PF04220 Der GTPase activator (YihI) HVY54_23085 PF01926 50S ribosome-binding GTPase HVY54_23090 PF00476 DNA polymerase family A HVY54_23090 PF01612 3'-5' exonuclease HVY54_23090 PF01367 5'-3' exonuclease, C-terminal SAM fold HVY54_23090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HVY54_23095 PF01553 Acyltransferase HVY54_23100 PF06097 Bacterial protein of unknown function (DUF945) HVY54_23105 PF01323 DSBA-like thioredoxin domain HVY54_23110 PF01636 Phosphotransferase enzyme family HVY54_23115 PF06288 Protein of unknown function (DUF1040) HVY54_23120 PF12804 MobA-like NTP transferase domain HVY54_23125 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HVY54_23150 PF12724 Flavodoxin domain HVY54_23155 PF02386 Cation transport protein HVY54_23160 PF09186 Domain of unknown function (DUF1949) HVY54_23160 PF01205 Uncharacterized protein family UPF0029 HVY54_23165 PF00557 Metallopeptidase family M24 HVY54_23170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HVY54_23170 PF00378 Enoyl-CoA hydratase/isomerase HVY54_23170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HVY54_23175 PF02803 Thiolase, C-terminal domain HVY54_23175 PF00108 Thiolase, N-terminal domain HVY54_23180 PF00175 Oxidoreductase NAD-binding domain HVY54_23180 PF00970 Oxidoreductase FAD-binding domain HVY54_23185 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HVY54_23190 PF02357 Transcription termination factor nusG HVY54_23195 PF01026 TatD related DNase HVY54_23200 PF00902 Sec-independent protein translocase protein (TatC) HVY54_23210 PF02416 mttA/Hcf106 family HVY54_23215 PF03109 ABC1 family HVY54_23220 PF02036 SCP-2 sterol transfer family HVY54_23225 PF01209 ubiE/COQ5 methyltransferase family HVY54_23230 PF02646 RmuC family HVY54_23235 PF01048 Phosphorylase superfamily HVY54_23240 PF01738 Dienelactone hydrolase family HVY54_23245 PF08267 Cobalamin-independent synthase, N-terminal domain HVY54_23245 PF01717 Cobalamin-independent synthase, Catalytic domain HVY54_23250 PF03466 LysR substrate binding domain HVY54_23250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_23255 PF00892 EamA-like transporter family HVY54_23265 PF12146 Serine aminopeptidase, S33 HVY54_23270 PF01810 LysE type translocator HVY54_23275 PF01810 LysE type translocator HVY54_23280 PF09382 RQC domain HVY54_23280 PF16124 RecQ zinc-binding HVY54_23280 PF00570 HRDC domain HVY54_23280 PF00271 Helicase conserved C-terminal domain HVY54_23280 PF00270 DEAD/DEAH box helicase HVY54_23285 PF02253 Phospholipase A1 HVY54_23290 PF03061 Thioesterase superfamily HVY54_23295 PF00892 EamA-like transporter family HVY54_23305 PF10947 Protein of unknown function (DUF2628) HVY54_23310 PF01544 CorA-like Mg2+ transporter protein HVY54_23315 PF09992 Phosphodiester glycosidase HVY54_23320 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HVY54_23325 PF13361 UvrD-like helicase C-terminal domain HVY54_23325 PF00580 UvrD/REP helicase N-terminal domain HVY54_23330 PF13419 Haloacid dehalogenase-like hydrolase HVY54_23335 PF02899 Phage integrase, N-terminal SAM-like domain HVY54_23335 PF00589 Phage integrase family HVY54_23340 PF04340 Protein of unknown function, DUF484 HVY54_23345 PF01678 Diaminopimelate epimerase HVY54_23350 PF13627 Prokaryotic lipoprotein-attachment site HVY54_23355 PF01491 Frataxin-like domain HVY54_23360 PF12633 Adenylate cyclase NT domain HVY54_23360 PF01295 Adenylate cyclase, class-I HVY54_23365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HVY54_23365 PF03900 Porphobilinogen deaminase, C-terminal domain HVY54_23370 PF02602 Uroporphyrinogen-III synthase HemD HVY54_23375 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HVY54_23380 PF07719 Tetratricopeptide repeat HVY54_23380 PF07219 HemY protein N-terminus HVY54_23385 PF00884 Sulfatase HVY54_23390 PF04055 Radical SAM superfamily HVY54_23390 PF13186 Iron-sulfur cluster-binding domain HVY54_23415 PF00324 Amino acid permease HVY54_23420 PF03808 Glycosyl transferase WecB/TagA/CpsF family HVY54_23425 PF06899 WzyE protein, O-antigen assembly polymerase HVY54_23430 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 HVY54_23435 PF01943 Polysaccharide biosynthesis protein HVY54_23440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HVY54_23450 PF00483 Nucleotidyl transferase HVY54_23455 PF16363 GDP-mannose 4,6 dehydratase HVY54_23460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HVY54_23460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HVY54_23460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HVY54_23465 PF02350 UDP-N-acetylglucosamine 2-epimerase HVY54_23470 PF02706 Chain length determinant protein HVY54_23475 PF00953 Glycosyl transferase family 4 HVY54_23480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVY54_23480 PF07497 Rho termination factor, RNA-binding domain HVY54_23480 PF07498 Rho termination factor, N-terminal domain HVY54_23490 PF00085 Thioredoxin HVY54_23495 PF00271 Helicase conserved C-terminal domain HVY54_23495 PF00270 DEAD/DEAH box helicase HVY54_23500 PF02541 Ppx/GppA phosphatase family HVY54_23505 PF00580 UvrD/REP helicase N-terminal domain HVY54_23505 PF13361 UvrD-like helicase C-terminal domain HVY54_23510 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HVY54_23520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HVY54_23520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HVY54_23525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_23525 PF03466 LysR substrate binding domain HVY54_23530 PF00291 Pyridoxal-phosphate dependent enzyme HVY54_23530 PF00585 C-terminal regulatory domain of Threonine dehydratase HVY54_23535 PF00920 Dehydratase family HVY54_23540 PF01063 Amino-transferase class IV HVY54_23550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVY54_23550 PF00205 Thiamine pyrophosphate enzyme, central domain HVY54_23550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVY54_23560 PF08046 IlvGEDA operon leader peptide HVY54_23565 PF13335 Magnesium chelatase, subunit ChlI C-terminal HVY54_23565 PF01078 Magnesium chelatase, subunit ChlI HVY54_23570 PF04219 Protein of unknown function, DUF HVY54_23575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_23575 PF03466 LysR substrate binding domain HVY54_23610 PF00392 Bacterial regulatory proteins, gntR family HVY54_23610 PF07729 FCD domain HVY54_23615 PF07690 Major Facilitator Superfamily HVY54_23620 PF00356 Bacterial regulatory proteins, lacI family HVY54_23625 PF00294 pfkB family carbohydrate kinase HVY54_23630 PF13407 Periplasmic binding protein domain HVY54_23635 PF02653 Branched-chain amino acid transport system / permease component HVY54_23640 PF00005 ABC transporter HVY54_23645 PF05025 RbsD / FucU transport protein family HVY54_23655 PF12592 Protein of unknown function (DUF3763) HVY54_23655 PF17868 AAA lid domain HVY54_23655 PF07728 AAA domain (dynein-related subfamily) HVY54_23660 PF05762 VWA domain containing CoxE-like protein HVY54_23665 PF03590 Aspartate-ammonia ligase HVY54_23670 PF01037 Lrp/AsnC ligand binding domain HVY54_23675 PF00258 Flavodoxin HVY54_23680 PF01134 Glucose inhibited division protein A HVY54_23680 PF13932 GidA associated domain HVY54_23685 PF02527 rRNA small subunit methyltransferase G HVY54_23690 PF03899 ATP synthase I chain HVY54_23695 PF00119 ATP synthase A chain HVY54_23700 PF00137 ATP synthase subunit C HVY54_23705 PF00430 ATP synthase B/B' CF(0) HVY54_23710 PF00213 ATP synthase delta (OSCP) subunit HVY54_23715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVY54_23715 PF00306 ATP synthase alpha/beta chain, C terminal domain HVY54_23715 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVY54_23720 PF00231 ATP synthase HVY54_23725 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVY54_23725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVY54_23730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HVY54_23730 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HVY54_23735 PF14602 Hexapeptide repeat of succinyl-transferase HVY54_23735 PF00132 Bacterial transferase hexapeptide (six repeats) HVY54_23735 PF12804 MobA-like NTP transferase domain HVY54_23740 PF01380 SIS domain HVY54_23745 PF00419 Fimbrial protein HVY54_23745 PF09222 Fimbrial adhesin F17-AG, lectin domain HVY54_23750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVY54_23750 PF02753 Pili assembly chaperone PapD, C-terminal domain HVY54_23755 PF00577 Outer membrane usher protein HVY54_23755 PF13954 PapC N-terminal domain HVY54_23755 PF13953 PapC C-terminal domain HVY54_23765 PF12849 PBP superfamily domain HVY54_23770 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_23775 PF00528 Binding-protein-dependent transport system inner membrane component HVY54_23780 PF00005 ABC transporter HVY54_23785 PF01895 PhoU domain HVY54_23810 PF13419 Haloacid dehalogenase-like hydrolase HVY54_23815 PF00860 Permease family HVY54_23820 PF03358 NADPH-dependent FMN reductase HVY54_23830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_23830 PF03466 LysR substrate binding domain HVY54_23835 PF07690 Major Facilitator Superfamily HVY54_23840 PF03222 Tryptophan/tyrosine permease family HVY54_23845 PF01212 Beta-eliminating lyase HVY54_23850 PF08053 Tryptophanase operon leader peptide HVY54_23860 PF01926 50S ribosome-binding GTPase HVY54_23860 PF12631 MnmE helical domain HVY54_23860 PF10396 GTP-binding protein TrmE N-terminus HVY54_23865 PF14849 YidC periplasmic domain HVY54_23865 PF02096 60Kd inner membrane protein HVY54_23870 PF01809 Putative membrane protein insertion efficiency factor HVY54_23875 PF00825 Ribonuclease P HVY54_23880 PF00468 Ribosomal protein L34 HVY54_23890 PF01051 Initiator Replication protein HVY54_23895 PF00589 Phage integrase family HVY54_23940 PF04519 Polymer-forming cytoskeletal HVY54_23950 PF00196 Bacterial regulatory proteins, luxR family HVY54_23950 PF00563 EAL domain HVY54_23970 PF00873 AcrB/AcrD/AcrF family HVY54_23985 PF02796 Helix-turn-helix domain of resolvase HVY54_23985 PF00239 Resolvase, N terminal domain HVY54_24025 PF07690 Major Facilitator Superfamily HVY54_24035 PF14537 Cytochrome c3 HVY54_24035 PF00890 FAD binding domain HVY54_24040 PF03466 LysR substrate binding domain HVY54_24040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVY54_24045 PF02387 IncFII RepA protein family HVY54_24055 PF08048 Tap RepA1 leader peptide HVY54_24060 PF10723 Replication regulatory protein RepB HVY54_24065 PF01848 Hok/gef family HVY54_24075 PF12602 Fertility inhibition protein N terminal HVY54_24075 PF04352 ProQ/FINO family HVY54_24090 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HVY54_24095 PF01850 PIN domain HVY54_24115 PF06406 StbA protein HVY54_24135 PF01845 CcdB protein HVY54_24140 PF07362 Post-segregation antitoxin CcdA HVY54_24185 PF07693 KAP family P-loop domain HVY54_24190 PF10137 Predicted nucleotide-binding protein containing TIR-like domain HVY54_24235 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HVY54_24295 PF00226 DnaJ domain HVY54_24295 PF00684 DnaJ central domain HVY54_24295 PF01556 DnaJ C terminal domain HVY54_24300 PF01051 Initiator Replication protein HVY54_24320 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HVY54_24325 PF02796 Helix-turn-helix domain of resolvase HVY54_24325 PF00239 Resolvase, N terminal domain HVY54_24340 PF00892 EamA-like transporter family HVY54_24345 PF07690 Major Facilitator Superfamily HVY54_24350 PF00440 Bacterial regulatory proteins, tetR family HVY54_24350 PF02909 Tetracyclin repressor-like, C-terminal domain HVY54_24365 PF13610 DDE domain HVY54_24370 PF13599 Pentapeptide repeats (9 copies) HVY54_24380 PF13610 DDE domain HVY54_24390 PF00816 H-NS histone family HVY54_24395 PF01131 DNA topoisomerase HVY54_24395 PF01751 Toprim domain HVY54_24410 PF00565 Staphylococcal nuclease homologue HVY54_24425 PF02534 Type IV secretory system Conjugative DNA transfer HVY54_24430 PF00437 Type II/IV secretion system protein HVY54_24435 PF01024 Colicin pore forming domain HVY54_24450 PF04899 MbeD/MobD like HVY54_24455 PF04837 MbeB-like, N-term conserved region HVY54_24465 PF05713 Bacterial mobilisation protein (MobC) HVY54_24470 PF01815 Rop protein HVY54_24475 PF02402 Lysis protein HVY54_24480 PF03526 Colicin E1 (microcin) immunity protein HVY54_24485 PF01320 Colicin immunity protein / pyocin immunity protein HVY54_24500 PF03389 MobA/MobL family HVY54_24515 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HVY54_24515 PF02402 Lysis protein HVY54_24520 PF15935 RNase LS, bacterial toxin HVY54_24525 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA HVY54_24535 PF01815 Rop protein