locus-tag class description HVZ88_00110 PF07484 Phage Tail Collar Domain HVZ88_00115 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_00120 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_00130 PF02796 Helix-turn-helix domain of resolvase HVZ88_00130 PF00239 Resolvase, N terminal domain HVZ88_00170 PF04606 Ogr/Delta-like zinc finger HVZ88_00175 PF02901 Pyruvate formate lyase-like HVZ88_00175 PF01228 Glycine radical HVZ88_00180 PF01226 Formate/nitrite transporter HVZ88_00185 PF18381 YcaO cyclodehydratase C-terminal domain HVZ88_00185 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HVZ88_00190 PF04239 Protein of unknown function (DUF421) HVZ88_00195 PF00266 Aminotransferase class-V HVZ88_00200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVZ88_00205 PF01435 Peptidase family M48 HVZ88_00210 PF02224 Cytidylate kinase HVZ88_00215 PF00575 S1 RNA binding domain HVZ88_00220 PF00216 Bacterial DNA-binding protein HVZ88_00225 PF03772 Competence protein HVZ88_00225 PF00753 Metallo-beta-lactamase superfamily HVZ88_00230 PF00664 ABC transporter transmembrane region HVZ88_00230 PF00005 ABC transporter HVZ88_00235 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HVZ88_00240 PF06224 Winged helix DNA-binding domain HVZ88_00245 PF03966 Trm112p-like protein HVZ88_00250 PF02348 Cytidylyltransferase HVZ88_00255 PF01636 Phosphotransferase enzyme family HVZ88_00260 PF02698 DUF218 domain HVZ88_00265 PF13847 Methyltransferase domain HVZ88_00270 PF17192 MukF middle domain HVZ88_00270 PF17193 MukF C-terminal domain HVZ88_00270 PF03882 MukF winged-helix domain HVZ88_00275 PF04288 MukE-like family HVZ88_00280 PF04310 MukB N-terminal HVZ88_00280 PF16330 MukB hinge domain HVZ88_00285 PF01471 Putative peptidoglycan binding domain HVZ88_00285 PF03734 L,D-transpeptidase catalytic domain HVZ88_00290 PF05951 Bacterial protein of unknown function (DUF882) HVZ88_00295 PF00753 Metallo-beta-lactamase superfamily HVZ88_00300 PF00155 Aminotransferase class I and II HVZ88_00305 PF00267 Gram-negative porin HVZ88_00310 PF00152 tRNA synthetases class II (D, K and N) HVZ88_00310 PF01336 OB-fold nucleic acid binding domain HVZ88_00315 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HVZ88_00315 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HVZ88_00320 PF11940 Domain of unknown function (DUF3458) Ig-like fold HVZ88_00320 PF01433 Peptidase family M1 domain HVZ88_00320 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HVZ88_00325 PF00005 ABC transporter HVZ88_00330 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_00335 PF00296 Luciferase-like monooxygenase HVZ88_00340 PF09084 NMT1/THI5 like HVZ88_00345 PF03358 NADPH-dependent FMN reductase HVZ88_00350 PF00419 Fimbrial protein HVZ88_00355 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_00355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_00360 PF13954 PapC N-terminal domain HVZ88_00360 PF00577 Outer membrane usher protein HVZ88_00360 PF13953 PapC C-terminal domain HVZ88_00365 PF00419 Fimbrial protein HVZ88_00370 PF00419 Fimbrial protein HVZ88_00375 PF00419 Fimbrial protein HVZ88_00380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_00380 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_00385 PF01180 Dihydroorotate dehydrogenase HVZ88_00390 PF07126 Cell-division protein ZapC HVZ88_00395 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_00395 PF03473 MOSC domain HVZ88_00395 PF03476 MOSC N-terminal beta barrel domain HVZ88_00400 PF02926 THUMP domain HVZ88_00400 PF10672 S-adenosylmethionine-dependent methyltransferase HVZ88_00400 PF01170 Putative RNA methylase family UPF0020 HVZ88_00405 PF12848 ABC transporter HVZ88_00405 PF00005 ABC transporter HVZ88_00405 PF16326 ABC transporter C-terminal domain HVZ88_00410 PF04403 Paraquat-inducible protein A HVZ88_00415 PF02470 MlaD protein HVZ88_00420 PF03886 ABC-type transport auxiliary lipoprotein component HVZ88_00425 PF04957 Ribosome modulation factor HVZ88_00430 PF07977 FabA-like domain HVZ88_00435 PF05362 Lon protease (S16) C-terminal proteolytic domain HVZ88_00435 PF13654 AAA domain HVZ88_00440 PF06303 MatP N-terminal domain HVZ88_00440 PF17414 MatP C-terminal ribbon-helix-helix domain HVZ88_00445 PF00691 OmpA family HVZ88_00445 PF01389 OmpA-like transmembrane domain HVZ88_00450 PF03846 Cell division inhibitor SulA HVZ88_00455 PF04993 TfoX N-terminal domain HVZ88_00455 PF04994 TfoX C-terminal domain HVZ88_00460 PF12805 FUSC-like inner membrane protein yccS HVZ88_00465 PF03733 Inner membrane component domain HVZ88_00470 PF12462 DNA helicase IV / RNA helicase N terminal HVZ88_00470 PF00580 UvrD/REP helicase N-terminal domain HVZ88_00470 PF13361 UvrD-like helicase C-terminal domain HVZ88_00475 PF02142 MGS-like domain HVZ88_00480 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HVZ88_00485 PF13380 CoA binding domain HVZ88_00490 PF08755 Hemimethylated DNA-binding protein YccV like HVZ88_00495 PF17785 PUA-like domain HVZ88_00495 PF10672 S-adenosylmethionine-dependent methyltransferase HVZ88_00500 PF00708 Acylphosphatase HVZ88_00505 PF04358 DsrC like protein HVZ88_00510 PF01027 Inhibitor of apoptosis-promoting Bax1 HVZ88_00520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVZ88_00520 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HVZ88_00525 PF00374 Nickel-dependent hydrogenase HVZ88_00530 PF01292 Prokaryotic cytochrome b561 HVZ88_00535 PF01750 Hydrogenase maturation protease HVZ88_00540 PF07449 Hydrogenase-1 expression protein HyaE HVZ88_00545 PF04809 HupH hydrogenase expression protein, C-terminal conserved region HVZ88_00550 PF01654 Cytochrome bd terminal oxidase subunit I HVZ88_00555 PF02322 Cytochrome bd terminal oxidase subunit II HVZ88_00560 PF08173 Membrane bound YbgT-like protein HVZ88_00565 PF00328 Histidine phosphatase superfamily (branch 2) HVZ88_00575 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HVZ88_00585 PF00313 'Cold-shock' DNA-binding domain HVZ88_00590 PF00313 'Cold-shock' DNA-binding domain HVZ88_00600 PF15939 Putative antitoxin of bacterial toxin-antitoxin system HVZ88_00605 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system HVZ88_00610 PF12801 4Fe-4S binding domain HVZ88_00615 PF00672 HAMP domain HVZ88_00615 PF00072 Response regulator receiver domain HVZ88_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_00615 PF01627 Hpt domain HVZ88_00615 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_00620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVZ88_00625 PF00486 Transcriptional regulatory protein, C terminal HVZ88_00625 PF00072 Response regulator receiver domain HVZ88_00630 PF03264 NapC/NirT cytochrome c family, N-terminal region HVZ88_00635 PF01568 Molydopterin dinucleotide binding domain HVZ88_00635 PF18364 Molybdopterin oxidoreductase N-terminal domain HVZ88_00635 PF00384 Molybdopterin oxidoreductase HVZ88_00640 PF02613 Nitrate reductase delta subunit HVZ88_00650 PF00226 DnaJ domain HVZ88_00650 PF01556 DnaJ C terminal domain HVZ88_00660 PF00328 Histidine phosphatase superfamily (branch 2) HVZ88_00665 PF13993 YccJ-like protein HVZ88_00670 PF03358 NADPH-dependent FMN reductase HVZ88_00675 PF10685 Stress-induced bacterial acidophilic repeat motif HVZ88_00680 PF00860 Permease family HVZ88_00685 PF01613 Flavin reductase like domain HVZ88_00690 PF00881 Nitroreductase family HVZ88_00695 PF12697 Alpha/beta hydrolase family HVZ88_00700 PF01042 Endoribonuclease L-PSP HVZ88_00705 PF00857 Isochorismatase family HVZ88_00710 PF00296 Luciferase-like monooxygenase HVZ88_00715 PF00440 Bacterial regulatory proteins, tetR family HVZ88_00715 PF08362 YcdC-like protein, C-terminal region HVZ88_00720 PF01619 Proline dehydrogenase HVZ88_00720 PF00171 Aldehyde dehydrogenase family HVZ88_00720 PF14850 DNA-binding domain of Proline dehydrogenase HVZ88_00720 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HVZ88_00730 PF00474 Sodium:solute symporter family HVZ88_00735 PF03239 Iron permease FTR1 family HVZ88_00740 PF09375 Imelysin HVZ88_00740 PF13473 Cupredoxin-like domain HVZ88_00745 PF04261 Dyp-type peroxidase family HVZ88_00750 PF02562 PhoH-like protein HVZ88_00755 PF13994 PgaD-like protein HVZ88_00760 PF00535 Glycosyl transferase family 2 HVZ88_00765 PF01522 Polysaccharide deacetylase HVZ88_00765 PF14883 Hypothetical glycosyl hydrolase family 13 HVZ88_00775 PF17158 Membrane-associated sensor, integral membrane domain HVZ88_00775 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_00805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVZ88_00810 PF02811 PHP domain HVZ88_00815 PF02613 Nitrate reductase delta subunit HVZ88_00820 PF06496 Protein of unknown function (DUF1097) HVZ88_00825 PF03783 Curli production assembly/transport component CsgG HVZ88_00830 PF10614 Type VIII secretion system (T8SS), CsgF protein HVZ88_00835 PF10627 Curli assembly protein CsgE HVZ88_00840 PF00196 Bacterial regulatory proteins, luxR family HVZ88_00845 PF07012 Curlin associated repeat HVZ88_00850 PF07012 Curlin associated repeat HVZ88_00855 PF10610 Thin aggregative fimbriae synthesis protein HVZ88_00865 PF01661 Macro domain HVZ88_00870 PF13091 PLD-like domain HVZ88_00875 PF01757 Acyltransferase family HVZ88_00880 PF04349 Periplasmic glucan biosynthesis protein, MdoG HVZ88_00885 PF00535 Glycosyl transferase family 2 HVZ88_00890 PF07119 Protein of unknown function (DUF1375) HVZ88_00895 PF13984 MsyB protein HVZ88_00900 PF07690 Major Facilitator Superfamily HVZ88_00905 PF03279 Bacterial lipid A biosynthesis acyltransferase HVZ88_00915 PF04264 YceI-like domain HVZ88_00920 PF01292 Prokaryotic cytochrome b561 HVZ88_00925 PF10968 Protein of unknown function (DUF2770) HVZ88_00930 PF01266 FAD dependent oxidoreductase HVZ88_00935 PF13991 BssS protein family HVZ88_00940 PF06183 DinI-like family HVZ88_00945 PF01979 Amidohydrolase family HVZ88_00950 PF07273 Protein of unknown function (DUF1439) HVZ88_00955 PF04399 Glutaredoxin 2, C terminal domain HVZ88_00955 PF13417 Glutathione S-transferase, N-terminal domain HVZ88_00960 PF07690 Major Facilitator Superfamily HVZ88_00965 PF13302 Acetyltransferase (GNAT) domain HVZ88_00970 PF04337 Protein of unknown function, DUF480 HVZ88_00975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVZ88_00980 PF03023 Lipid II flippase MurJ HVZ88_00985 PF05130 FlgN protein HVZ88_00990 PF04316 Anti-sigma-28 factor, FlgM HVZ88_00995 PF13144 Chaperone for flagella basal body P-ring formation HVZ88_01000 PF00460 Flagella basal body rod protein HVZ88_01005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_01005 PF00460 Flagella basal body rod protein HVZ88_01010 PF13861 FlgD Tudor-like domain HVZ88_01010 PF13860 FlgD Ig-like domain HVZ88_01010 PF03963 Flagellar hook capping protein - N-terminal region HVZ88_01015 PF07559 Flagellar basal body protein FlaE HVZ88_01015 PF00460 Flagella basal body rod protein HVZ88_01015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_01020 PF00460 Flagella basal body rod protein HVZ88_01020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_01025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_01025 PF00460 Flagella basal body rod protein HVZ88_01030 PF02107 Flagellar L-ring protein HVZ88_01035 PF02119 Flagellar P-ring protein HVZ88_01040 PF10135 Rod binding protein HVZ88_01040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HVZ88_01045 PF00460 Flagella basal body rod protein HVZ88_01045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_01050 PF00669 Bacterial flagellin N-terminal helical region HVZ88_01055 PF00575 S1 RNA binding domain HVZ88_01055 PF12111 Polyribonucleotide phosphorylase C terminal HVZ88_01055 PF10150 Ribonuclease E/G family HVZ88_01060 PF01479 S4 domain HVZ88_01060 PF00849 RNA pseudouridylate synthase HVZ88_01065 PF02545 Maf-like protein HVZ88_01070 PF02620 Large ribosomal RNA subunit accumulation protein YceD HVZ88_01075 PF01783 Ribosomal L32p protein family HVZ88_01080 PF02504 Fatty acid synthesis protein HVZ88_01085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HVZ88_01085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HVZ88_01090 PF00698 Acyl transferase domain HVZ88_01100 PF00550 Phosphopantetheine attachment site HVZ88_01105 PF02801 Beta-ketoacyl synthase, C-terminal domain HVZ88_01105 PF00109 Beta-ketoacyl synthase, N-terminal domain HVZ88_01110 PF01063 Amino-transferase class IV HVZ88_01115 PF02618 YceG-like family HVZ88_01120 PF02223 Thymidylate kinase HVZ88_01125 PF09115 DNA polymerase III, delta subunit, C terminal HVZ88_01130 PF01026 TatD related DNase HVZ88_01135 PF02378 Phosphotransferase system, EIIC HVZ88_01135 PF00367 phosphotransferase system, EIIB HVZ88_01140 PF00593 TonB dependent receptor HVZ88_01140 PF07715 TonB-dependent Receptor Plug Domain HVZ88_01145 PF01230 HIT domain HVZ88_01150 PF07233 Protein of unknown function (DUF1425) HVZ88_01155 PF13036 Peptidoglycan-synthase activator LpoB HVZ88_01160 PF01636 Phosphotransferase enzyme family HVZ88_01165 PF00933 Glycosyl hydrolase family 3 N terminal domain HVZ88_01170 PF05728 Uncharacterised protein family (UPF0227) HVZ88_01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_01180 PF05433 Glycine zipper 2TM domain HVZ88_01185 PF00440 Bacterial regulatory proteins, tetR family HVZ88_01190 PF07338 Protein of unknown function (DUF1471) HVZ88_01195 PF17969 L,D-transpeptidase C-terminal domain HVZ88_01195 PF01476 LysM domain HVZ88_01195 PF03734 L,D-transpeptidase catalytic domain HVZ88_01200 PF17757 UvrB interaction domain HVZ88_01200 PF00270 DEAD/DEAH box helicase HVZ88_01200 PF00271 Helicase conserved C-terminal domain HVZ88_01200 PF03461 TRCF domain HVZ88_01200 PF02559 CarD-like/TRCF domain HVZ88_01205 PF01757 Acyltransferase family HVZ88_01210 PF12704 MacB-like periplasmic core domain HVZ88_01210 PF02687 FtsX-like permease family HVZ88_01215 PF00005 ABC transporter HVZ88_01220 PF12704 MacB-like periplasmic core domain HVZ88_01220 PF02687 FtsX-like permease family HVZ88_01225 PF00480 ROK family HVZ88_01230 PF02146 Sir2 family HVZ88_01235 PF04536 TPM domain HVZ88_01240 PF12158 Protein of unknown function (DUF3592) HVZ88_01245 PF13416 Bacterial extracellular solute-binding protein HVZ88_01250 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_01255 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_01260 PF00005 ABC transporter HVZ88_01260 PF08402 TOBE domain HVZ88_01265 PF01546 Peptidase family M20/M25/M40 HVZ88_01265 PF07687 Peptidase dimerisation domain HVZ88_01270 PF08007 Cupin superfamily protein HVZ88_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_01275 PF08918 PhoQ Sensor HVZ88_01280 PF00486 Transcriptional regulatory protein, C terminal HVZ88_01280 PF00072 Response regulator receiver domain HVZ88_01285 PF08328 Adenylosuccinate lyase C-terminal HVZ88_01285 PF00206 Lyase HVZ88_01290 PF04356 Protein of unknown function (DUF489) HVZ88_01300 PF00293 NUDIX domain HVZ88_01305 PF00849 RNA pseudouridylate synthase HVZ88_01310 PF00180 Isocitrate/isopropylmalate dehydrogenase HVZ88_01330 PF07166 Protein of unknown function (DUF1398) HVZ88_01335 PF13411 MerR HTH family regulatory protein HVZ88_01345 PF10798 Biofilm development protein YmgB/AriR HVZ88_01355 PF10798 Biofilm development protein YmgB/AriR HVZ88_01370 PF12792 CSS motif domain associated with EAL HVZ88_01370 PF00563 EAL domain HVZ88_01385 PF16456 YmgD protein HVZ88_01390 PF13436 Glycine-zipper domain HVZ88_01415 PF03776 Septum formation topological specificity factor MinE HVZ88_01420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HVZ88_01425 PF03775 Septum formation inhibitor MinC, C-terminal domain HVZ88_01425 PF05209 Septum formation inhibitor MinC, N-terminal domain HVZ88_01430 PF05666 Fels-1 Prophage Protein-like HVZ88_01435 PF04151 Bacterial pre-peptidase C-terminal domain HVZ88_01440 PF05166 YcgL domain HVZ88_01445 PF01557 Fumarylacetoacetate (FAA) hydrolase family HVZ88_01450 PF03692 Putative zinc- or iron-chelating domain HVZ88_01460 PF00717 Peptidase S24-like HVZ88_01465 PF00817 impB/mucB/samB family HVZ88_01465 PF11799 impB/mucB/samB family C-terminal domain HVZ88_01465 PF11798 IMS family HHH motif HVZ88_01465 PF13438 Domain of unknown function (DUF4113) HVZ88_01470 PF02600 Disulfide bond formation protein DsbB HVZ88_01475 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HVZ88_01480 PF00392 Bacterial regulatory proteins, gntR family HVZ88_01480 PF07840 FadR C-terminal domain HVZ88_01485 PF04293 SpoVR like protein HVZ88_01490 PF01266 FAD dependent oxidoreductase HVZ88_01495 PF01168 Alanine racemase, N-terminal domain HVZ88_01495 PF00842 Alanine racemase, C-terminal domain HVZ88_01500 PF00999 Sodium/hydrogen exchanger family HVZ88_01500 PF02080 TrkA-C domain HVZ88_01500 PF03471 Transporter associated domain HVZ88_01505 PF17676 LD-carboxypeptidase C-terminal domain HVZ88_01505 PF02016 LD-carboxypeptidase N-terminal domain HVZ88_01510 PF01464 Transglycosylase SLT domain HVZ88_01515 PF07238 PilZ domain HVZ88_01515 PF07317 Flagellar regulator YcgR HVZ88_01520 PF04226 Transglycosylase associated protein HVZ88_01530 PF01204 Trehalase HVZ88_01535 PF00391 PEP-utilising enzyme, mobile domain HVZ88_01535 PF05524 PEP-utilising enzyme, N-terminal HVZ88_01535 PF00381 PTS HPr component phosphorylation site HVZ88_01535 PF03610 PTS system fructose IIA component HVZ88_01540 PF02734 DAK2 domain HVZ88_01545 PF02733 Dak1 domain HVZ88_01550 PF02954 Bacterial regulatory protein, Fis family HVZ88_01550 PF00158 Sigma-54 interaction domain HVZ88_01550 PF00989 PAS fold HVZ88_01555 PF03797 Autotransporter beta-domain HVZ88_01555 PF03212 Pertactin HVZ88_01560 PF01926 50S ribosome-binding GTPase HVZ88_01560 PF06071 Protein of unknown function (DUF933) HVZ88_01565 PF01195 Peptidyl-tRNA hydrolase HVZ88_01570 PF10762 Protein of unknown function (DUF2583) HVZ88_01575 PF01740 STAS domain HVZ88_01575 PF00916 Sulfate permease family HVZ88_01580 PF14572 Phosphoribosyl synthetase-associated domain HVZ88_01580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HVZ88_01585 PF00288 GHMP kinases N terminal domain HVZ88_01585 PF08544 GHMP kinases C terminal HVZ88_01590 PF03550 Outer membrane lipoprotein LolB HVZ88_01595 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HVZ88_01595 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HVZ88_01595 PF01488 Shikimate / quinate 5-dehydrogenase HVZ88_01600 PF00472 RF-1 domain HVZ88_01600 PF03462 PCRF domain HVZ88_01605 PF17827 PrmC N-terminal domain HVZ88_01605 PF13847 Methyltransferase domain HVZ88_01610 PF04247 Invasion gene expression up-regulator, SirB HVZ88_01615 PF13369 Transglutaminase-like superfamily HVZ88_01620 PF00793 DAHP synthetase I family HVZ88_01625 PF13940 Toxin Ldr, type I toxin-antitoxin system HVZ88_01630 PF13940 Toxin Ldr, type I toxin-antitoxin system HVZ88_01635 PF13940 Toxin Ldr, type I toxin-antitoxin system HVZ88_01640 PF01699 Sodium/calcium exchanger protein HVZ88_01645 PF06150 ChaB HVZ88_01650 PF04752 ChaC-like protein HVZ88_01655 PF02635 DsrE/DsrF-like family HVZ88_01660 PF11924 Inverse autotransporter, beta-domain HVZ88_01665 PF00196 Bacterial regulatory proteins, luxR family HVZ88_01665 PF00072 Response regulator receiver domain HVZ88_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_01670 PF07730 Histidine kinase HVZ88_01670 PF00672 HAMP domain HVZ88_01670 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HVZ88_01675 PF07690 Major Facilitator Superfamily HVZ88_01680 PF14710 Respiratory nitrate reductase alpha N-terminal HVZ88_01680 PF01568 Molydopterin dinucleotide binding domain HVZ88_01680 PF00384 Molybdopterin oxidoreductase HVZ88_01685 PF13247 4Fe-4S dicluster domain HVZ88_01685 PF14711 Respiratory nitrate reductase beta C-terminal HVZ88_01690 PF02613 Nitrate reductase delta subunit HVZ88_01695 PF02665 Nitrate reductase gamma subunit HVZ88_01730 PF00551 Formyl transferase HVZ88_01730 PF01842 ACT domain HVZ88_01735 PF02810 SEC-C motif HVZ88_01740 PF01734 Patatin-like phospholipase HVZ88_01745 PF00072 Response regulator receiver domain HVZ88_01750 PF00483 Nucleotidyl transferase HVZ88_01755 PF00816 H-NS histone family HVZ88_01760 PF00265 Thymidine kinase HVZ88_01770 PF00465 Iron-containing alcohol dehydrogenase HVZ88_01770 PF00171 Aldehyde dehydrogenase family HVZ88_01775 PF01914 MarC family integral membrane protein HVZ88_01780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_01785 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_01790 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_01790 PF12911 N-terminal TM domain of oligopeptide transport permease C HVZ88_01795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_01795 PF00005 ABC transporter HVZ88_01800 PF00005 ABC transporter HVZ88_01800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_01805 PF04269 Protein of unknown function, DUF440 HVZ88_01810 PF13091 PLD-like domain HVZ88_01810 PF13396 Phospholipase_D-nuclease N-terminal HVZ88_01820 PF02254 TrkA-N domain HVZ88_01820 PF07885 Ion channel HVZ88_01825 PF03795 YCII-related domain HVZ88_01830 PF03544 Gram-negative bacterial TonB protein C-terminal HVZ88_01835 PF03061 Thioesterase superfamily HVZ88_01840 PF04279 Intracellular septation protein A HVZ88_01855 PF03922 OmpW family HVZ88_01860 PF00589 Phage integrase family HVZ88_01860 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain HVZ88_01875 PF07358 Protein of unknown function (DUF1482) HVZ88_01880 PF05358 DicB protein HVZ88_01890 PF07151 Protein of unknown function (DUF1391) HVZ88_01895 PF01381 Helix-turn-helix HVZ88_01915 PF01695 IstB-like ATP binding protein HVZ88_01920 PF07789 Protein of unknown function (DUF1627) HVZ88_01985 PF06147 Protein of unknown function (DUF968) HVZ88_01990 PF05866 Endodeoxyribonuclease RusA HVZ88_02005 PF01555 DNA methylase HVZ88_02065 PF07471 Phage DNA packaging protein Nu1 HVZ88_02070 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_02075 PF02831 gpW HVZ88_02085 PF01957 NfeD-like C-terminal, partner-binding HVZ88_02085 PF01972 Serine dehydrogenase proteinase HVZ88_02095 PF03864 Phage major capsid protein E HVZ88_02140 PF13693 Winged helix-turn-helix DNA-binding HVZ88_02150 PF13401 AAA domain HVZ88_02150 PF09077 Mu B transposition protein, C terminal HVZ88_02260 PF01555 DNA methylase HVZ88_02270 PF06074 Protein of unknown function (DUF935) HVZ88_02295 PF10124 Mu-like prophage major head subunit gpT HVZ88_02375 PF08400 Prophage tail fibre N-terminal HVZ88_02375 PF03335 Phage tail fibre repeat HVZ88_02375 PF08400 Prophage tail fibre N-terminal HVZ88_02375 PF03335 Phage tail fibre repeat HVZ88_02375 PF07484 Phage Tail Collar Domain HVZ88_02375 PF07484 Phage Tail Collar Domain HVZ88_02380 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_02385 PF03335 Phage tail fibre repeat HVZ88_02385 PF07484 Phage Tail Collar Domain HVZ88_02385 PF08400 Prophage tail fibre N-terminal HVZ88_02400 PF06791 Prophage tail length tape measure protein HVZ88_02430 PF06316 Enterobacterial Ail/Lom protein HVZ88_02450 PF05974 Domain of unknown function (DUF892) HVZ88_02455 PF05974 Domain of unknown function (DUF892) HVZ88_02460 PF10685 Stress-induced bacterial acidophilic repeat motif HVZ88_02465 PF00290 Tryptophan synthase alpha chain HVZ88_02470 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_02475 PF00218 Indole-3-glycerol phosphate synthase HVZ88_02475 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HVZ88_02480 PF00117 Glutamine amidotransferase class-I HVZ88_02480 PF02885 Glycosyl transferase family, helical bundle domain HVZ88_02480 PF00591 Glycosyl transferase family, a/b domain HVZ88_02485 PF04715 Anthranilate synthase component I, N terminal region HVZ88_02485 PF00425 chorismate binding enzyme HVZ88_02490 PF08255 Trp-operon Leader Peptide HVZ88_02495 PF02811 PHP domain HVZ88_02500 PF01300 Telomere recombination HVZ88_02505 PF09972 Predicted membrane protein (DUF2207) HVZ88_02510 PF01479 S4 domain HVZ88_02510 PF00849 RNA pseudouridylate synthase HVZ88_02515 PF12557 Cob(I)alamin adenosyltransferase N terminal HVZ88_02515 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HVZ88_02520 PF00106 short chain dehydrogenase HVZ88_02525 PF08496 Peptidase family S49 N-terminal HVZ88_02525 PF01343 Peptidase family S49 HVZ88_02530 PF10692 Protein of unknown function (DUF2498) HVZ88_02535 PF01396 Topoisomerase DNA binding C4 zinc finger HVZ88_02535 PF01131 DNA topoisomerase HVZ88_02535 PF08272 Topoisomerase I zinc-ribbon-like HVZ88_02535 PF01751 Toprim domain HVZ88_02540 PF03466 LysR substrate binding domain HVZ88_02540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_02560 PF00694 Aconitase C-terminal domain HVZ88_02560 PF00330 Aconitase family (aconitate hydratase) HVZ88_02565 PF00925 GTP cyclohydrolase II HVZ88_02570 PF01569 PAP2 superfamily HVZ88_02575 PF06305 Lipopolysaccharide assembly protein A domain HVZ88_02580 PF18073 Rubredoxin metal binding domain HVZ88_02585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HVZ88_02590 PF01253 Translation initiation factor SUI1 HVZ88_02595 PF05433 Glycine zipper 2TM domain HVZ88_02600 PF08220 DeoR-like helix-turn-helix domain HVZ88_02600 PF00455 DeoR C terminal sensor domain HVZ88_02610 PF00563 EAL domain HVZ88_02610 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_02610 PF13426 PAS domain HVZ88_02620 PF08206 Ribonuclease B OB domain HVZ88_02620 PF00773 RNB domain HVZ88_02620 PF17876 Cold shock domain HVZ88_02620 PF00575 S1 RNA binding domain HVZ88_02635 PF04480 Protein of unknown function (DUF559) HVZ88_02640 PF00005 ABC transporter HVZ88_02645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_02645 PF00005 ABC transporter HVZ88_02650 PF12911 N-terminal TM domain of oligopeptide transport permease C HVZ88_02650 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_02655 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_02660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_02665 PF10820 Protein of unknown function (DUF2543) HVZ88_02670 PF00324 Amino acid permease HVZ88_02680 PF00120 Glutamine synthetase, catalytic domain HVZ88_02685 PF07722 Peptidase C26 HVZ88_02690 PF01381 Helix-turn-helix HVZ88_02690 PF07883 Cupin domain HVZ88_02695 PF00171 Aldehyde dehydrogenase family HVZ88_02700 PF01266 FAD dependent oxidoreductase HVZ88_02705 PF00202 Aminotransferase class-III HVZ88_02710 PF02954 Bacterial regulatory protein, Fis family HVZ88_02710 PF00158 Sigma-54 interaction domain HVZ88_02715 PF04012 PspA/IM30 family HVZ88_02720 PF06667 Phage shock protein B HVZ88_02725 PF04024 PspC domain HVZ88_02730 PF09584 Phage shock protein PspD (Phageshock_PspD) HVZ88_02735 PF00581 Rhodanese-like domain HVZ88_02740 PF00128 Alpha amylase, catalytic domain HVZ88_02745 PF01547 Bacterial extracellular solute-binding protein HVZ88_02750 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_02755 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_02760 PF00107 Zinc-binding dehydrogenase HVZ88_02765 PF01261 Xylose isomerase-like TIM barrel HVZ88_02770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVZ88_02770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HVZ88_02775 PF03633 Glycosyl hydrolase family 65, C-terminal domain HVZ88_02775 PF03636 Glycosyl hydrolase family 65, N-terminal domain HVZ88_02775 PF03632 Glycosyl hydrolase family 65 central catalytic domain HVZ88_02780 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_02785 PF17912 MalK OB fold domain HVZ88_02785 PF00005 ABC transporter HVZ88_02785 PF03459 TOBE domain HVZ88_02790 PF09381 Outer membrane protein G (OmpG) HVZ88_02795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVZ88_02795 PF00356 Bacterial regulatory proteins, lacI family HVZ88_02800 PF04317 YcjX-like family, DUF463 HVZ88_02805 PF05128 Domain of unknown function (DUF697) HVZ88_02810 PF18024 Helix-turn-helix domain HVZ88_02810 PF13188 PAS domain HVZ88_02810 PF00158 Sigma-54 interaction domain HVZ88_02815 PF08534 Redoxin HVZ88_02820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVZ88_02820 PF13378 Enolase C-terminal domain-like HVZ88_02825 PF00246 Zinc carboxypeptidase HVZ88_02840 PF12146 Serine aminopeptidase, S33 HVZ88_02845 PF03466 LysR substrate binding domain HVZ88_02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_02850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_02855 PF00924 Mechanosensitive ion channel HVZ88_02860 PF10749 Protein of unknown function (DUF2534) HVZ88_02865 PF00582 Universal stress protein family HVZ88_02870 PF00325 Bacterial regulatory proteins, crp family HVZ88_02870 PF00027 Cyclic nucleotide-binding domain HVZ88_02875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HVZ88_02875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HVZ88_02880 PF03806 AbgT putative transporter family HVZ88_02885 PF01546 Peptidase family M20/M25/M40 HVZ88_02890 PF01546 Peptidase family M20/M25/M40 HVZ88_02890 PF07687 Peptidase dimerisation domain HVZ88_02895 PF03466 LysR substrate binding domain HVZ88_02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_02900 PF01713 Smr domain HVZ88_02905 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_02905 PF08448 PAS fold HVZ88_02910 PF01544 CorA-like Mg2+ transporter protein HVZ88_02915 PF00270 DEAD/DEAH box helicase HVZ88_02915 PF00271 Helicase conserved C-terminal domain HVZ88_02915 PF03880 DbpA RNA binding domain HVZ88_02920 PF01171 PP-loop family HVZ88_02925 PF00582 Universal stress protein family HVZ88_02930 PF00267 Gram-negative porin HVZ88_02935 PF10371 Domain of unknown function HVZ88_02935 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HVZ88_02935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_02935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HVZ88_02935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HVZ88_02940 PF03891 Domain of unknown function (DUF333) HVZ88_02945 PF03724 META domain HVZ88_02950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVZ88_02950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVZ88_02955 PF11739 Dicarboxylate transport HVZ88_02960 PF13617 YnbE-like lipoprotein HVZ88_02965 PF07027 Protein of unknown function (DUF1318) HVZ88_02970 PF12833 Helix-turn-helix domain HVZ88_02970 PF14525 AraC-binding-like domain HVZ88_02975 PF00171 Aldehyde dehydrogenase family HVZ88_02985 PF00171 Aldehyde dehydrogenase family HVZ88_02985 PF01575 MaoC like domain HVZ88_02990 PF05138 Phenylacetic acid catabolic protein HVZ88_02995 PF06243 Phenylacetic acid degradation B HVZ88_03000 PF05138 Phenylacetic acid catabolic protein HVZ88_03005 PF01883 Iron-sulfur cluster assembly protein HVZ88_03010 PF00970 Oxidoreductase FAD-binding domain HVZ88_03010 PF00175 Oxidoreductase NAD-binding domain HVZ88_03010 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_03015 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_03020 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_03025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HVZ88_03025 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HVZ88_03025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HVZ88_03030 PF03061 Thioesterase superfamily HVZ88_03035 PF00108 Thiolase, N-terminal domain HVZ88_03035 PF02803 Thiolase, C-terminal domain HVZ88_03040 PF14535 AMP-binding enzyme C-terminal domain HVZ88_03040 PF00501 AMP-binding enzyme HVZ88_03045 PF07848 PaaX-like protein HVZ88_03045 PF08223 PaaX-like protein C-terminal domain HVZ88_03050 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_03065 PF00248 Aldo/keto reductase family HVZ88_03070 PF10971 Protein of unknown function (DUF2773) HVZ88_03075 PF01066 CDP-alcohol phosphatidyltransferase HVZ88_03085 PF12146 Serine aminopeptidase, S33 HVZ88_03085 PF12147 Putative methyltransferase HVZ88_03095 PF02525 Flavodoxin-like fold HVZ88_03100 PF00271 Helicase conserved C-terminal domain HVZ88_03100 PF00270 DEAD/DEAH box helicase HVZ88_03100 PF11898 Domain of unknown function (DUF3418) HVZ88_03100 PF04408 Helicase associated domain (HA2) HVZ88_03100 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HVZ88_03105 PF02698 DUF218 domain HVZ88_03110 PF00171 Aldehyde dehydrogenase family HVZ88_03125 PF01292 Prokaryotic cytochrome b561 HVZ88_03135 PF01848 Hok/gef family HVZ88_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVZ88_03140 PF00672 HAMP domain HVZ88_03140 PF02203 Tar ligand binding domain homologue HVZ88_03145 PF03466 LysR substrate binding domain HVZ88_03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_03150 PF07063 Domain of unknown function (DUF1338) HVZ88_03155 PF04349 Periplasmic glucan biosynthesis protein, MdoG HVZ88_03160 PF04325 Protein of unknown function (DUF465) HVZ88_03165 PF13302 Acetyltransferase (GNAT) domain HVZ88_03170 PF18836 Beta solenoid repeat from YDCK HVZ88_03175 PF03595 Voltage-dependent anion channel HVZ88_03180 PF03848 Tellurite resistance protein TehB HVZ88_03185 PF11769 Protein of unknown function (DUF3313) HVZ88_03195 PF01385 Probable transposase HVZ88_03195 PF12323 Helix-turn-helix domain HVZ88_03195 PF07282 Putative transposase DNA-binding domain HVZ88_03200 PF03594 Benzoate membrane transport protein HVZ88_03205 PF07883 Cupin domain HVZ88_03205 PF01381 Helix-turn-helix HVZ88_03210 PF01136 Peptidase family U32 HVZ88_03210 PF12392 Collagenase HVZ88_03215 PF10829 Protein of unknown function (DUF2554) HVZ88_03220 PF07927 HicA toxin of bacterial toxin-antitoxin, HVZ88_03225 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HVZ88_03225 PF01381 Helix-turn-helix HVZ88_03230 PF00392 Bacterial regulatory proteins, gntR family HVZ88_03230 PF00155 Aminotransferase class I and II HVZ88_03235 PF13416 Bacterial extracellular solute-binding protein HVZ88_03240 PF00005 ABC transporter HVZ88_03240 PF08402 TOBE domain HVZ88_03245 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_03250 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_03255 PF00171 Aldehyde dehydrogenase family HVZ88_03265 PF10753 Toxin GhoT_OrtT HVZ88_03270 PF10735 Protein of unknown function (DUF2526) HVZ88_03275 PF04657 Putative inner membrane exporter, YdcZ HVZ88_03280 PF00583 Acetyltransferase (GNAT) family HVZ88_03285 PF00107 Zinc-binding dehydrogenase HVZ88_03285 PF16884 N-terminal domain of oxidoreductase HVZ88_03290 PF07729 FCD domain HVZ88_03290 PF00392 Bacterial regulatory proteins, gntR family HVZ88_03295 PF00593 TonB dependent receptor HVZ88_03295 PF07715 TonB-dependent Receptor Plug Domain HVZ88_03305 PF00324 Amino acid permease HVZ88_03310 PF13417 Glutathione S-transferase, N-terminal domain HVZ88_03315 PF17520 Family of unknown function (DUF5445) HVZ88_03345 PF13808 DDE_Tnp_1-associated HVZ88_03345 PF01609 Transposase DDE domain HVZ88_03350 PF01361 Tautomerase enzyme HVZ88_03355 PF01613 Flavin reductase like domain HVZ88_03360 PF00797 N-acetyltransferase HVZ88_03365 PF02567 Phenazine biosynthesis-like protein HVZ88_03370 PF02665 Nitrate reductase gamma subunit HVZ88_03375 PF02613 Nitrate reductase delta subunit HVZ88_03380 PF14711 Respiratory nitrate reductase beta C-terminal HVZ88_03380 PF13247 4Fe-4S dicluster domain HVZ88_03385 PF00384 Molybdopterin oxidoreductase HVZ88_03385 PF14710 Respiratory nitrate reductase alpha N-terminal HVZ88_03385 PF01568 Molydopterin dinucleotide binding domain HVZ88_03390 PF07690 Major Facilitator Superfamily HVZ88_03400 PF00267 Gram-negative porin HVZ88_03405 PF00892 EamA-like transporter family HVZ88_03415 PF13247 4Fe-4S dicluster domain HVZ88_03415 PF12800 4Fe-4S binding domain HVZ88_03415 PF09163 Formate dehydrogenase N, transmembrane HVZ88_03420 PF01292 Prokaryotic cytochrome b561 HVZ88_03425 PF01381 Helix-turn-helix HVZ88_03430 PF00107 Zinc-binding dehydrogenase HVZ88_03430 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_03435 PF03949 Malic enzyme, NAD binding domain HVZ88_03435 PF00390 Malic enzyme, N-terminal domain HVZ88_03440 PF08136 30S ribosomal protein subunit S22 family HVZ88_03445 PF10684 Putative biofilm-dependent modulation protein HVZ88_03450 PF02566 OsmC-like protein HVZ88_03455 PF00005 ABC transporter HVZ88_03455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_03460 PF00005 ABC transporter HVZ88_03460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_03465 PF12911 N-terminal TM domain of oligopeptide transport permease C HVZ88_03465 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_03470 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_03475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_03480 PF01427 D-ala-D-ala dipeptidase HVZ88_03485 PF00563 EAL domain HVZ88_03485 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_03485 PF13426 PAS domain HVZ88_03490 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_03505 PF13520 Amino acid permease HVZ88_03510 PF00282 Pyridoxal-dependent decarboxylase conserved domain HVZ88_03515 PF05193 Peptidase M16 inactive domain HVZ88_03515 PF00675 Insulinase (Peptidase family M16) HVZ88_03520 PF07715 TonB-dependent Receptor Plug Domain HVZ88_03525 PF00005 ABC transporter HVZ88_03525 PF06472 ABC transporter transmembrane region 2 HVZ88_03535 PF04055 Radical SAM superfamily HVZ88_03535 PF13186 Iron-sulfur cluster-binding domain HVZ88_03540 PF00884 Sulfatase HVZ88_03545 PF12833 Helix-turn-helix domain HVZ88_03550 PF17073 Two-component-system connector protein HVZ88_03555 PF00384 Molybdopterin oxidoreductase HVZ88_03560 PF09160 FimH, mannose binding HVZ88_03565 PF00419 Fimbrial protein HVZ88_03570 PF00419 Fimbrial protein HVZ88_03585 PF14282 FlxA-like protein HVZ88_03595 PF04221 RelB antitoxin HVZ88_03600 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HVZ88_03605 PF01848 Hok/gef family HVZ88_03620 PF06147 Protein of unknown function (DUF968) HVZ88_03625 PF03589 Antitermination protein HVZ88_03635 PF00313 'Cold-shock' DNA-binding domain HVZ88_03640 PF00313 'Cold-shock' DNA-binding domain HVZ88_03645 PF04971 Bacteriophage P21 holin S HVZ88_03650 PF07041 Protein of unknown function (DUF1327) HVZ88_03655 PF00959 Phage lysozyme HVZ88_03660 PF10721 Protein of unknown function (DUF2514) HVZ88_03665 PF00313 'Cold-shock' DNA-binding domain HVZ88_03685 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system HVZ88_03690 PF07166 Protein of unknown function (DUF1398) HVZ88_03695 PF13132 Domain of unknown function (DUF3950) HVZ88_03700 PF07471 Phage DNA packaging protein Nu1 HVZ88_03710 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_03715 PF02796 Helix-turn-helix domain of resolvase HVZ88_03715 PF00239 Resolvase, N terminal domain HVZ88_03735 PF01232 Mannitol dehydrogenase Rossmann domain HVZ88_03735 PF08125 Mannitol dehydrogenase C-terminal domain HVZ88_03740 PF14001 YdfZ protein HVZ88_03745 PF07729 FCD domain HVZ88_03745 PF00392 Bacterial regulatory proteins, gntR family HVZ88_03750 PF00106 short chain dehydrogenase HVZ88_03755 PF01432 Peptidase family M3 HVZ88_03760 PF02464 Competence-damaged protein HVZ88_03765 PF04076 Bacterial OB fold (BOF) protein HVZ88_03770 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_03780 PF07690 Major Facilitator Superfamily HVZ88_03785 PF00892 EamA-like transporter family HVZ88_03790 PF13999 MarB protein HVZ88_03795 PF12833 Helix-turn-helix domain HVZ88_03800 PF01047 MarR family HVZ88_03805 PF01914 MarC family integral membrane protein HVZ88_03810 PF07690 Major Facilitator Superfamily HVZ88_03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_03820 PF03466 LysR substrate binding domain HVZ88_03825 PF00171 Aldehyde dehydrogenase family HVZ88_03830 PF04960 Glutaminase HVZ88_03835 PF13811 Domain of unknown function (DUF4186) HVZ88_03840 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_03845 PF01232 Mannitol dehydrogenase Rossmann domain HVZ88_03845 PF08125 Mannitol dehydrogenase C-terminal domain HVZ88_03850 PF01062 Bestrophin, RFP-TM, chloride channel HVZ88_03855 PF13649 Methyltransferase domain HVZ88_03860 PF03992 Antibiotic biosynthesis monooxygenase HVZ88_03865 PF01791 DeoC/LacD family aldolase HVZ88_03870 PF13407 Periplasmic binding protein domain HVZ88_03875 PF02653 Branched-chain amino acid transport system / permease component HVZ88_03880 PF02653 Branched-chain amino acid transport system / permease component HVZ88_03885 PF00005 ABC transporter HVZ88_03890 PF04198 Putative sugar-binding domain HVZ88_03895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_03895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_03900 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_03905 PF01381 Helix-turn-helix HVZ88_03910 PF13657 HipA N-terminal domain HVZ88_03910 PF07804 HipA-like C-terminal domain HVZ88_03955 PF05358 DicB protein HVZ88_03960 PF07358 Protein of unknown function (DUF1482) HVZ88_03975 PF12167 Arm DNA-binding domain HVZ88_03975 PF00589 Phage integrase family HVZ88_03985 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_03985 PF00107 Zinc-binding dehydrogenase HVZ88_03990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVZ88_03990 PF13378 Enolase C-terminal domain-like HVZ88_03995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HVZ88_04000 PF06932 Protein of unknown function (DUF1283) HVZ88_04005 PF13302 Acetyltransferase (GNAT) domain HVZ88_04010 PF06788 Uncharacterised protein family (UPF0257) HVZ88_04015 PF06649 Protein of unknown function (DUF1161) HVZ88_04020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVZ88_04020 PF00384 Molybdopterin oxidoreductase HVZ88_04020 PF01568 Molydopterin dinucleotide binding domain HVZ88_04025 PF00384 Molybdopterin oxidoreductase HVZ88_04025 PF01568 Molydopterin dinucleotide binding domain HVZ88_04025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVZ88_04030 PF13247 4Fe-4S dicluster domain HVZ88_04030 PF12800 4Fe-4S binding domain HVZ88_04035 PF04976 DMSO reductase anchor subunit (DmsC) HVZ88_04040 PF02613 Nitrate reductase delta subunit HVZ88_04045 PF00654 Voltage gated chloride channel HVZ88_04055 PF00480 ROK family HVZ88_04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_04060 PF03466 LysR substrate binding domain HVZ88_04065 PF07690 Major Facilitator Superfamily HVZ88_04080 PF00089 Trypsin HVZ88_04085 PF00893 Small Multidrug Resistance protein HVZ88_04090 PF00893 Small Multidrug Resistance protein HVZ88_04095 PF01594 AI-2E family transporter HVZ88_04100 PF02233 NAD(P) transhydrogenase beta subunit HVZ88_04105 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HVZ88_04105 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HVZ88_04105 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HVZ88_04110 PF07338 Protein of unknown function (DUF1471) HVZ88_04115 PF13520 Amino acid permease HVZ88_04125 PF06942 GlpM protein HVZ88_04130 PF00072 Response regulator receiver domain HVZ88_04130 PF00486 Transcriptional regulatory protein, C terminal HVZ88_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_04135 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_04135 PF00672 HAMP domain HVZ88_04140 PF05472 DNA replication terminus site-binding protein (Ter protein) HVZ88_04145 PF00206 Lyase HVZ88_04145 PF10415 Fumarase C C-terminus HVZ88_04150 PF05681 Fumarate hydratase (Fumerase) HVZ88_04150 PF05683 Fumarase C-terminus HVZ88_04155 PF01238 Phosphomannose isomerase type I HVZ88_04160 PF06097 Bacterial protein of unknown function (DUF945) HVZ88_04165 PF03573 outer membrane porin, OprD family HVZ88_04175 PF00703 Glycosyl hydrolases family 2 HVZ88_04175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HVZ88_04175 PF02837 Glycosyl hydrolases family 2, sugar binding domain HVZ88_04180 PF00440 Bacterial regulatory proteins, tetR family HVZ88_04190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVZ88_04190 PF00356 Bacterial regulatory proteins, lacI family HVZ88_04195 PF00367 phosphotransferase system, EIIB HVZ88_04195 PF02378 Phosphotransferase system, EIIC HVZ88_04200 PF00155 Aminotransferase class I and II HVZ88_04205 PF00962 Adenosine/AMP deaminase HVZ88_04210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVZ88_04210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HVZ88_04220 PF05321 Haemolysin expression modulating protein HVZ88_04225 PF10754 Protein of unknown function (DUF2569) HVZ88_04230 PF02508 Rnf-Nqr subunit, membrane protein HVZ88_04235 PF04060 Putative Fe-S cluster HVZ88_04240 PF12838 4Fe-4S dicluster domain HVZ88_04240 PF13375 RnfC Barrel sandwich hybrid domain HVZ88_04240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HVZ88_04240 PF10531 SLBB domain HVZ88_04245 PF03116 NQR2, RnfD, RnfE family HVZ88_04250 PF04205 FMN-binding domain HVZ88_04255 PF02508 Rnf-Nqr subunit, membrane protein HVZ88_04260 PF10576 Iron-sulfur binding domain of endonuclease III HVZ88_04260 PF00730 HhH-GPD superfamily base excision DNA repair protein HVZ88_04260 PF00633 Helix-hairpin-helix motif HVZ88_04265 PF00854 POT family HVZ88_04270 PF00043 Glutathione S-transferase, C-terminal domain HVZ88_04270 PF02798 Glutathione S-transferase, N-terminal domain HVZ88_04275 PF08543 Phosphomethylpyrimidine kinase HVZ88_04280 PF00579 tRNA synthetases class I (W and Y) HVZ88_04280 PF01479 S4 domain HVZ88_04285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HVZ88_04285 PF01243 Pyridoxamine 5'-phosphate oxidase HVZ88_04290 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HVZ88_04295 PF03702 Anhydro-N-acetylmuramic acid kinase HVZ88_04300 PF05433 Glycine zipper 2TM domain HVZ88_04305 PF01047 MarR family HVZ88_04310 PF07869 Protein of unknown function (DUF1656) HVZ88_04315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_04315 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_04320 PF04632 Fusaric acid resistance protein family HVZ88_04325 PF00080 Copper/zinc superoxide dismutase (SODC) HVZ88_04330 PF00248 Aldo/keto reductase family HVZ88_04335 PF06945 Protein of unknown function (DUF1289) HVZ88_04340 PF16925 Tetracyclin repressor-like, C-terminal domain HVZ88_04340 PF00440 Bacterial regulatory proteins, tetR family HVZ88_04345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HVZ88_04350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HVZ88_04355 PF00929 Exonuclease HVZ88_04360 PF08494 DEAD/H associated HVZ88_04360 PF00271 Helicase conserved C-terminal domain HVZ88_04360 PF00270 DEAD/DEAH box helicase HVZ88_04365 PF00462 Glutaredoxin HVZ88_04370 PF00877 NlpC/P60 family HVZ88_04375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HVZ88_04375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HVZ88_04380 PF07690 Major Facilitator Superfamily HVZ88_04390 PF00356 Bacterial regulatory proteins, lacI family HVZ88_04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_04395 PF03466 LysR substrate binding domain HVZ88_04400 PF07690 Major Facilitator Superfamily HVZ88_04410 PF00677 Lumazine binding domain HVZ88_04415 PF01554 MatE HVZ88_04420 PF03212 Pertactin HVZ88_04420 PF16168 Adhesin of bacterial autotransporter system, probable stalk HVZ88_04435 PF08803 Putative mono-oxygenase ydhR HVZ88_04440 PF13454 FAD-NAD(P)-binding HVZ88_04450 PF01292 Prokaryotic cytochrome b561 HVZ88_04455 PF13247 4Fe-4S dicluster domain HVZ88_04465 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 HVZ88_04465 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain HVZ88_04470 PF13247 4Fe-4S dicluster domain HVZ88_04470 PF12800 4Fe-4S binding domain HVZ88_04475 PF10965 Protein of unknown function (DUF2767) HVZ88_04480 PF00224 Pyruvate kinase, barrel domain HVZ88_04480 PF02887 Pyruvate kinase, alpha/beta domain HVZ88_04485 PF04728 Lipoprotein leucine-zipper HVZ88_04490 PF17969 L,D-transpeptidase C-terminal domain HVZ88_04490 PF03734 L,D-transpeptidase catalytic domain HVZ88_04490 PF01476 LysM domain HVZ88_04495 PF02657 Fe-S metabolism associated domain HVZ88_04500 PF00266 Aminotransferase class-V HVZ88_04505 PF01458 Uncharacterized protein family (UPF0051) HVZ88_04510 PF00005 ABC transporter HVZ88_04515 PF01458 Uncharacterized protein family (UPF0051) HVZ88_04520 PF01521 Iron-sulphur cluster biosynthesis HVZ88_04525 PF15930 Domain of unknown function HVZ88_04530 PF03061 Thioesterase superfamily HVZ88_04535 PF02913 FAD linked oxidases, C-terminal domain HVZ88_04535 PF01565 FAD binding domain HVZ88_04535 PF13183 4Fe-4S dicluster domain HVZ88_04540 PF01594 AI-2E family transporter HVZ88_04550 PF08965 Domain of unknown function (DUF1870) HVZ88_04555 PF07690 Major Facilitator Superfamily HVZ88_04560 PF07690 Major Facilitator Superfamily HVZ88_04565 PF08501 Shikimate dehydrogenase substrate binding domain HVZ88_04565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HVZ88_04570 PF01487 Type I 3-dehydroquinase HVZ88_04575 PF01144 Coenzyme A transferase HVZ88_04580 PF02770 Acyl-CoA dehydrogenase, middle domain HVZ88_04580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HVZ88_04580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVZ88_04585 PF02311 AraC-like ligand binding domain HVZ88_04585 PF12833 Helix-turn-helix domain HVZ88_04590 PF01012 Electron transfer flavoprotein domain HVZ88_04595 PF01012 Electron transfer flavoprotein domain HVZ88_04595 PF00766 Electron transfer flavoprotein FAD-binding domain HVZ88_04600 PF01494 FAD binding domain HVZ88_04610 PF00501 AMP-binding enzyme HVZ88_04610 PF13193 AMP-binding enzyme C-terminal domain HVZ88_04615 PF00391 PEP-utilising enzyme, mobile domain HVZ88_04615 PF02896 PEP-utilising enzyme, TIM barrel domain HVZ88_04615 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HVZ88_04620 PF03618 Kinase/pyrophosphorylase HVZ88_04625 PF00793 DAHP synthetase I family HVZ88_04630 PF10636 Hemin uptake protein hemP HVZ88_04635 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HVZ88_04640 PF00563 EAL domain HVZ88_04645 PF00877 NlpC/P60 family HVZ88_04650 PF00005 ABC transporter HVZ88_04655 PF00255 Glutathione peroxidase HVZ88_04660 PF01032 FecCD transport family HVZ88_04675 PF00589 Phage integrase family HVZ88_04675 PF02899 Phage integrase, N-terminal SAM-like domain HVZ88_04725 PF05840 Bacteriophage replication gene A protein (GPA) HVZ88_04830 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_04840 PF02796 Helix-turn-helix domain of resolvase HVZ88_04840 PF00239 Resolvase, N terminal domain HVZ88_04870 PF04984 Phage tail sheath protein subtilisin-like domain HVZ88_04870 PF17482 Phage tail sheath C-terminal domain HVZ88_04900 PF00216 Bacterial DNA-binding protein HVZ88_04905 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HVZ88_04905 PF01588 Putative tRNA binding domain HVZ88_04905 PF03147 Ferredoxin-fold anticodon binding domain HVZ88_04905 PF03483 B3/4 domain HVZ88_04905 PF03484 tRNA synthetase B5 domain HVZ88_04910 PF01409 tRNA synthetases class II core domain (F) HVZ88_04910 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HVZ88_04920 PF00453 Ribosomal protein L20 HVZ88_04925 PF01632 Ribosomal protein L35 HVZ88_04930 PF00707 Translation initiation factor IF-3, C-terminal domain HVZ88_04930 PF05198 Translation initiation factor IF-3, N-terminal domain HVZ88_04935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVZ88_04935 PF03129 Anticodon binding domain HVZ88_04935 PF02824 TGS domain HVZ88_04935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HVZ88_04950 PF04338 Protein of unknown function, DUF481 HVZ88_04955 PF00294 pfkB family carbohydrate kinase HVZ88_04960 PF11080 Endoribonuclease GhoS HVZ88_04965 PF03881 Fructosamine kinase HVZ88_04970 PF14002 YniB-like protein HVZ88_04975 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_04980 PF04307 LexA-binding, inner membrane-associated putative hydrolase HVZ88_04995 PF10729 Cell division activator CedA HVZ88_05000 PF06628 Catalase-related immune-responsive HVZ88_05000 PF18011 C-terminal domain found in long catalases HVZ88_05000 PF00199 Catalase HVZ88_05005 PF04794 YdjC-like protein HVZ88_05010 PF02056 Family 4 glycosyl hydrolase HVZ88_05010 PF11975 Family 4 glycosyl hydrolase C-terminal domain HVZ88_05015 PF07883 Cupin domain HVZ88_05015 PF12833 Helix-turn-helix domain HVZ88_05020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HVZ88_05025 PF02378 Phosphotransferase system, EIIC HVZ88_05030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_05035 PF04355 SmpA / OmlA family HVZ88_05040 PF02540 NAD synthase HVZ88_05050 PF05962 HutD HVZ88_05055 PF07813 LTXXQ motif family protein HVZ88_05060 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HVZ88_05065 PF04996 Succinylarginine dihydrolase HVZ88_05070 PF00171 Aldehyde dehydrogenase family HVZ88_05075 PF04958 Arginine N-succinyltransferase beta subunit HVZ88_05080 PF00202 Aminotransferase class-III HVZ88_05085 PF03372 Endonuclease/Exonuclease/phosphatase family HVZ88_05090 PF09335 SNARE associated Golgi protein HVZ88_05100 PF09335 SNARE associated Golgi protein HVZ88_05105 PF02627 Carboxymuconolactone decarboxylase family HVZ88_05110 PF13416 Bacterial extracellular solute-binding protein HVZ88_05115 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_05120 PF00005 ABC transporter HVZ88_05125 PF00581 Rhodanese-like domain HVZ88_05130 PF01066 CDP-alcohol phosphatidyltransferase HVZ88_05135 PF00293 NUDIX domain HVZ88_05140 PF07383 Protein of unknown function (DUF1496) HVZ88_05145 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HVZ88_05145 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HVZ88_05150 PF06889 Protein of unknown function (DUF1266) HVZ88_05155 PF01751 Toprim domain HVZ88_05155 PF01131 DNA topoisomerase HVZ88_05160 PF02769 AIR synthase related protein, C-terminal domain HVZ88_05160 PF00586 AIR synthase related protein, N-terminal domain HVZ88_05165 PF00881 Nitroreductase family HVZ88_05170 PF01343 Peptidase family S49 HVZ88_05175 PF00710 Asparaginase, N-terminal HVZ88_05175 PF17763 Glutaminase/Asparaginase C-terminal domain HVZ88_05180 PF00857 Isochorismatase family HVZ88_05185 PF00083 Sugar (and other) transporter HVZ88_05190 PF08220 DeoR-like helix-turn-helix domain HVZ88_05190 PF00455 DeoR C terminal sensor domain HVZ88_05195 PF00248 Aldo/keto reductase family HVZ88_05200 PF00294 pfkB family carbohydrate kinase HVZ88_05205 PF01116 Fructose-bisphosphate aldolase class-II HVZ88_05210 PF00107 Zinc-binding dehydrogenase HVZ88_05210 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_05215 PF00083 Sugar (and other) transporter HVZ88_05225 PF07023 Protein of unknown function (DUF1315) HVZ88_05230 PF01641 SelR domain HVZ88_05235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HVZ88_05235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HVZ88_05240 PF01263 Aldose 1-epimerase HVZ88_05245 PF00248 Aldo/keto reductase family HVZ88_05250 PF06629 MltA-interacting protein MipA HVZ88_05255 PF06798 PrkA serine protein kinase C-terminal domain HVZ88_05255 PF08298 PrkA AAA domain HVZ88_05260 PF04285 Protein of unknown function (DUF444) HVZ88_05265 PF17158 Membrane-associated sensor, integral membrane domain HVZ88_05265 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_05270 PF17155 Gammaproteobacterial periplasmic sensor domain HVZ88_05270 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_05275 PF04073 Aminoacyl-tRNA editing domain HVZ88_05285 PF04284 Protein of unknown function (DUF441) HVZ88_05290 PF02311 AraC-like ligand binding domain HVZ88_05290 PF12833 Helix-turn-helix domain HVZ88_05295 PF07690 Major Facilitator Superfamily HVZ88_05300 PF04343 Protein of unknown function, DUF488 HVZ88_05305 PF03891 Domain of unknown function (DUF333) HVZ88_05310 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_05310 PF13185 GAF domain HVZ88_05325 PF04226 Transglycosylase associated protein HVZ88_05330 PF08956 Domain of unknown function (DUF1869) HVZ88_05335 PF09313 Domain of unknown function (DUF1971) HVZ88_05340 PF01810 LysE type translocator HVZ88_05345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_05345 PF03466 LysR substrate binding domain HVZ88_05350 PF00180 Isocitrate/isopropylmalate dehydrogenase HVZ88_05360 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HVZ88_05360 PF00355 Rieske [2Fe-2S] domain HVZ88_05365 PF00970 Oxidoreductase FAD-binding domain HVZ88_05365 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_05365 PF00175 Oxidoreductase NAD-binding domain HVZ88_05370 PF00570 HRDC domain HVZ88_05370 PF01612 3'-5' exonuclease HVZ88_05375 PF00501 AMP-binding enzyme HVZ88_05375 PF13193 AMP-binding enzyme C-terminal domain HVZ88_05380 PF03843 Outer membrane lipoprotein Slp family HVZ88_05385 PF00814 Glycoprotease family HVZ88_05390 PF04851 Type III restriction enzyme, res subunit HVZ88_05390 PF13307 Helicase C-terminal domain HVZ88_05395 PF01042 Endoribonuclease L-PSP HVZ88_05400 PF08986 Domain of unknown function (DUF1889) HVZ88_05405 PF03701 Uncharacterised protein family (UPF0181) HVZ88_05410 PF04715 Anthranilate synthase component I, N terminal region HVZ88_05410 PF00425 chorismate binding enzyme HVZ88_05415 PF00293 NUDIX domain HVZ88_05420 PF03313 Serine dehydratase alpha chain HVZ88_05420 PF03315 Serine dehydratase beta chain HVZ88_05425 PF12792 CSS motif domain associated with EAL HVZ88_05425 PF00563 EAL domain HVZ88_05430 PF03471 Transporter associated domain HVZ88_05430 PF03741 Integral membrane protein TerC family HVZ88_05435 PF03610 PTS system fructose IIA component HVZ88_05435 PF03830 PTS system sorbose subfamily IIB component HVZ88_05440 PF03609 PTS system sorbose-specific iic component HVZ88_05445 PF03613 PTS system mannose/fructose/sorbose family IID component HVZ88_05450 PF06173 Protein of unknown function (DUF986) HVZ88_05455 PF02659 Putative manganese efflux pump HVZ88_05460 PF13847 Methyltransferase domain HVZ88_05465 PF00313 'Cold-shock' DNA-binding domain HVZ88_05470 PF10736 Protein of unknown function (DUF2627) HVZ88_05475 PF13974 YebO-like protein HVZ88_05480 PF13998 MgrB protein HVZ88_05485 PF13996 YobH-like protein HVZ88_05490 PF09339 IclR helix-turn-helix domain HVZ88_05490 PF01614 Bacterial transcriptional regulator HVZ88_05495 PF07690 Major Facilitator Superfamily HVZ88_05500 PF01435 Peptidase family M48 HVZ88_05505 PF11818 C-terminal domain of tail specific protease (DUF3340) HVZ88_05505 PF00595 PDZ domain HVZ88_05505 PF17804 Tail specific protease N-terminal domain HVZ88_05505 PF03572 Peptidase family S41 HVZ88_05510 PF04352 ProQ/FINO family HVZ88_05510 PF17516 ProQ C-terminal domain HVZ88_05515 PF13185 GAF domain HVZ88_05520 PF04403 Paraquat-inducible protein A HVZ88_05525 PF02470 MlaD protein HVZ88_05530 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HVZ88_05530 PF01189 16S rRNA methyltransferase RsmB/F HVZ88_05530 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HVZ88_05535 PF07351 Protein of unknown function (DUF1480) HVZ88_05540 PF07358 Protein of unknown function (DUF1482) HVZ88_05545 PF00149 Calcineurin-like phosphoesterase HVZ88_05550 PF10709 Protein of unknown function (DUF2511) HVZ88_05555 PF05425 Copper resistance protein D HVZ88_05560 PF04234 CopC domain HVZ88_05565 PF06440 DNA polymerase III, theta subunit HVZ88_05570 PF00795 Carbon-nitrogen hydrolase HVZ88_05575 PF00929 Exonuclease HVZ88_05580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HVZ88_05580 PF00326 Prolyl oligopeptidase family HVZ88_05585 PF04391 Protein of unknown function (DUF533) HVZ88_05590 PF13995 YebF-like protein HVZ88_05595 PF07130 YebG protein HVZ88_05600 PF02222 ATP-grasp domain HVZ88_05605 PF01081 KDPG and KHG aldolase HVZ88_05610 PF00920 Dehydratase family HVZ88_05615 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HVZ88_05615 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HVZ88_05620 PF01418 Helix-turn-helix domain, rpiR family HVZ88_05620 PF01380 SIS domain HVZ88_05625 PF00224 Pyruvate kinase, barrel domain HVZ88_05625 PF02887 Pyruvate kinase, alpha/beta domain HVZ88_05630 PF03279 Bacterial lipid A biosynthesis acyltransferase HVZ88_05635 PF01551 Peptidase family M23 HVZ88_05635 PF08525 Opacity-associated protein A N-terminal motif HVZ88_05635 PF01476 LysM domain HVZ88_05640 PF01297 Zinc-uptake complex component A periplasmic HVZ88_05645 PF00005 ABC transporter HVZ88_05650 PF00950 ABC 3 transport family HVZ88_05655 PF17864 RuvB AAA lid domain HVZ88_05655 PF05491 RuvB C-terminal winged helix domain HVZ88_05655 PF05496 Holliday junction DNA helicase RuvB P-loop domain HVZ88_05660 PF01330 RuvA N terminal domain HVZ88_05660 PF07499 RuvA, C-terminal domain HVZ88_05670 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HVZ88_05675 PF02075 Crossover junction endodeoxyribonuclease RuvC HVZ88_05680 PF01709 Transcriptional regulator HVZ88_05685 PF00293 NUDIX domain HVZ88_05690 PF01336 OB-fold nucleic acid binding domain HVZ88_05690 PF00152 tRNA synthetases class II (D, K and N) HVZ88_05690 PF02938 GAD domain HVZ88_05695 PF00857 Isochorismatase family HVZ88_05700 PF01904 Protein of unknown function DUF72 HVZ88_05705 PF01124 MAPEG family HVZ88_05710 PF13649 Methyltransferase domain HVZ88_05715 PF08003 Protein of unknown function (DUF1698) HVZ88_05720 PF00384 Molybdopterin oxidoreductase HVZ88_05720 PF01568 Molydopterin dinucleotide binding domain HVZ88_05720 PF18364 Molybdopterin oxidoreductase N-terminal domain HVZ88_05725 PF03264 NapC/NirT cytochrome c family, N-terminal region HVZ88_05730 PF03932 CutC family HVZ88_05735 PF06185 YecM protein HVZ88_05740 PF03485 Arginyl tRNA synthetase N terminal domain HVZ88_05740 PF05746 DALR anticodon binding domain HVZ88_05740 PF00750 tRNA synthetases class I (R) HVZ88_05745 PF07007 Lysozyme inhibitor LprI HVZ88_05750 PF06366 Flagellar protein FlhE HVZ88_05755 PF00771 FHIPEP family HVZ88_05760 PF01312 FlhB HrpN YscU SpaS Family HVZ88_05765 PF04344 Chemotaxis phosphatase, CheZ HVZ88_05770 PF00072 Response regulator receiver domain HVZ88_05775 PF00072 Response regulator receiver domain HVZ88_05775 PF01339 CheB methylesterase HVZ88_05780 PF03705 CheR methyltransferase, all-alpha domain HVZ88_05780 PF01739 CheR methyltransferase, SAM binding domain HVZ88_05785 PF00672 HAMP domain HVZ88_05785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVZ88_05785 PF02203 Tar ligand binding domain homologue HVZ88_05790 PF00672 HAMP domain HVZ88_05790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVZ88_05790 PF02203 Tar ligand binding domain homologue HVZ88_05795 PF01584 CheW-like domain HVZ88_05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_05800 PF01627 Hpt domain HVZ88_05800 PF01584 CheW-like domain HVZ88_05800 PF09078 CheY binding HVZ88_05800 PF02895 Signal transducing histidine kinase, homodimeric domain HVZ88_05805 PF00691 OmpA family HVZ88_05805 PF13677 Membrane MotB of proton-channel complex MotA/MotB HVZ88_05810 PF01618 MotA/TolQ/ExbB proton channel family HVZ88_05815 PF05280 Flagellar transcriptional activator (FlhC) HVZ88_05820 PF05247 Flagellar transcriptional activator (FlhD) HVZ88_05825 PF00582 Universal stress protein family HVZ88_05830 PF00982 Glycosyltransferase family 20 HVZ88_05835 PF02358 Trehalose-phosphatase HVZ88_05840 PF02653 Branched-chain amino acid transport system / permease component HVZ88_05845 PF00005 ABC transporter HVZ88_05850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVZ88_05855 PF00210 Ferritin-like domain HVZ88_05860 PF10964 Protein of unknown function (DUF2766) HVZ88_05870 PF13992 YecR-like lipoprotein HVZ88_05875 PF00210 Ferritin-like domain HVZ88_05880 PF10678 Protein of unknown function (DUF2492) HVZ88_05885 PF03222 Tryptophan/tyrosine permease family HVZ88_05890 PF02810 SEC-C motif HVZ88_05890 PF03695 Uncharacterised protein family (UPF0149) HVZ88_05910 PF01066 CDP-alcohol phosphatidyltransferase HVZ88_05915 PF08459 UvrC Helix-hairpin-helix N-terminal HVZ88_05915 PF02151 UvrB/uvrC motif HVZ88_05915 PF01541 GIY-YIG catalytic domain HVZ88_05920 PF00196 Bacterial regulatory proteins, luxR family HVZ88_05920 PF00072 Response regulator receiver domain HVZ88_05930 PF10769 Protein of unknown function (DUF2594) HVZ88_05935 PF00196 Bacterial regulatory proteins, luxR family HVZ88_05935 PF03472 Autoinducer binding domain HVZ88_05950 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_05960 PF02899 Phage integrase, N-terminal SAM-like domain HVZ88_05965 PF04545 Sigma-70, region 4 HVZ88_05965 PF04539 Sigma-70 region 3 HVZ88_05965 PF04542 Sigma-70 region 2 HVZ88_05970 PF00669 Bacterial flagellin N-terminal helical region HVZ88_05970 PF12445 Flagellin protein HVZ88_05970 PF00700 Bacterial flagellin C-terminal helical region HVZ88_05975 PF07195 Flagellar hook-associated protein 2 C-terminus HVZ88_05975 PF02465 Flagellar hook-associated protein 2 N-terminus HVZ88_05980 PF02561 Flagellar protein FliS HVZ88_05985 PF05400 Flagellar protein FliT HVZ88_05990 PF00128 Alpha amylase, catalytic domain HVZ88_05990 PF02806 Alpha amylase, C-terminal all-beta domain HVZ88_05995 PF13987 YedD-like protein HVZ88_06000 PF04143 Sulphur transport HVZ88_06005 PF01206 Sulfurtransferase TusA HVZ88_06010 PF02586 SOS response associated peptidase (SRAP) HVZ88_06015 PF02049 Flagellar hook-basal body complex protein FliE HVZ88_06020 PF01514 Secretory protein of YscJ/FliF family HVZ88_06020 PF08345 Flagellar M-ring protein C-terminal HVZ88_06025 PF14841 FliG middle domain HVZ88_06025 PF01706 FliG C-terminal domain HVZ88_06025 PF14842 FliG N-terminal domain HVZ88_06030 PF02108 Flagellar assembly protein FliH HVZ88_06035 PF18269 T3SS EscN ATPase C-terminal domain HVZ88_06035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVZ88_06040 PF02050 Flagellar FliJ protein HVZ88_06045 PF02120 Flagellar hook-length control protein FliK HVZ88_06050 PF03748 Flagellar basal body-associated protein FliL HVZ88_06055 PF02154 Flagellar motor switch protein FliM HVZ88_06055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVZ88_06060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVZ88_06060 PF16973 Flagellar motor switch protein FliN N-terminal HVZ88_06065 PF04347 Flagellar biosynthesis protein, FliO HVZ88_06070 PF00813 FliP family HVZ88_06075 PF01313 Bacterial export proteins, family 3 HVZ88_06080 PF01311 Bacterial export proteins, family 1 HVZ88_06085 PF00196 Bacterial regulatory proteins, luxR family HVZ88_06090 PF10781 Dextransucrase DSRB HVZ88_06095 PF10733 Protein of unknown function (DUF2525) HVZ88_06105 PF17151 Periplasmic sensor domain HVZ88_06105 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_06110 PF09926 Uncharacterized small protein (DUF2158) HVZ88_06115 PF05661 Protein of unknown function (DUF808) HVZ88_06120 PF00892 EamA-like transporter family HVZ88_06125 PF03852 DNA mismatch endonuclease Vsr HVZ88_06130 PF00145 C-5 cytosine-specific DNA methylase HVZ88_06130 PF18284 DNA methylase N-terminal domain HVZ88_06135 PF01966 HD domain HVZ88_06145 PF00267 Gram-negative porin HVZ88_06155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_06155 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_06160 PF00072 Response regulator receiver domain HVZ88_06160 PF00486 Transcriptional regulatory protein, C terminal HVZ88_06165 PF00576 HIUase/Transthyretin family HVZ88_06170 PF00174 Oxidoreductase molybdopterin binding domain HVZ88_06175 PF01794 Ferric reductase like transmembrane component HVZ88_06180 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HVZ88_06185 PF01292 Prokaryotic cytochrome b561 HVZ88_06195 PF06167 Glucose-regulated metallo-peptidase M90 HVZ88_06205 PF13356 Arm DNA-binding domain HVZ88_06205 PF00589 Phage integrase family HVZ88_06210 PF00589 Phage integrase family HVZ88_06210 PF13356 Arm DNA-binding domain HVZ88_06235 PF07690 Major Facilitator Superfamily HVZ88_06235 PF00083 Sugar (and other) transporter HVZ88_06240 PF01048 Phosphorylase superfamily HVZ88_06240 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HVZ88_06245 PF01709 Transcriptional regulator HVZ88_06255 PF01554 MatE HVZ88_06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_06265 PF03466 LysR substrate binding domain HVZ88_06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_06270 PF03466 LysR substrate binding domain HVZ88_06280 PF00589 Phage integrase family HVZ88_06280 PF13356 Arm DNA-binding domain HVZ88_06285 PF13356 Arm DNA-binding domain HVZ88_06285 PF00589 Phage integrase family HVZ88_06315 PF01380 SIS domain HVZ88_06325 PF00834 Ribulose-phosphate 3 epimerase family HVZ88_06330 PF03611 PTS system sugar-specific permease component HVZ88_06335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_06345 PF00455 DeoR C terminal sensor domain HVZ88_06345 PF08220 DeoR-like helix-turn-helix domain HVZ88_06350 PF02502 Ribose/Galactose Isomerase HVZ88_06355 PF03611 PTS system sugar-specific permease component HVZ88_06360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_06365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_06370 PF04198 Putative sugar-binding domain HVZ88_06375 PF17969 L,D-transpeptidase C-terminal domain HVZ88_06375 PF03734 L,D-transpeptidase catalytic domain HVZ88_06380 PF02277 Phosphoribosyltransferase HVZ88_06385 PF02654 Cobalamin-5-phosphate synthase HVZ88_06390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HVZ88_06405 PF04363 Protein of unknown function (DUF496) HVZ88_06410 PF04632 Fusaric acid resistance protein family HVZ88_06415 PF06445 GyrI-like small molecule binding domain HVZ88_06420 PF07943 Penicillin-binding protein 5, C-terminal domain HVZ88_06420 PF00768 D-alanyl-D-alanine carboxypeptidase HVZ88_06425 PF08411 Exonuclease C-terminal HVZ88_06425 PF00929 Exonuclease HVZ88_06430 PF01206 Sulfurtransferase TusA HVZ88_06435 PF04143 Sulphur transport HVZ88_06440 PF13520 Amino acid permease HVZ88_06450 PF03466 LysR substrate binding domain HVZ88_06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_06455 PF01370 NAD dependent epimerase/dehydratase family HVZ88_06465 PF08029 HisG, C-terminal domain HVZ88_06465 PF01634 ATP phosphoribosyltransferase HVZ88_06470 PF00815 Histidinol dehydrogenase HVZ88_06475 PF00155 Aminotransferase class I and II HVZ88_06480 PF08645 Polynucleotide kinase 3 phosphatase HVZ88_06480 PF00475 Imidazoleglycerol-phosphate dehydratase HVZ88_06485 PF00117 Glutamine amidotransferase class-I HVZ88_06490 PF00977 Histidine biosynthesis protein HVZ88_06495 PF00977 Histidine biosynthesis protein HVZ88_06500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HVZ88_06500 PF01502 Phosphoribosyl-AMP cyclohydrolase HVZ88_06505 PF02706 Chain length determinant protein HVZ88_06510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HVZ88_06510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HVZ88_06510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HVZ88_06515 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HVZ88_06515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVZ88_06535 PF00535 Glycosyl transferase family 2 HVZ88_06550 PF03275 UDP-galactopyranose mutase HVZ88_06555 PF01943 Polysaccharide biosynthesis protein HVZ88_06560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HVZ88_06565 PF00483 Nucleotidyl transferase HVZ88_06570 PF04321 RmlD substrate binding domain HVZ88_06575 PF16363 GDP-mannose 4,6 dehydratase HVZ88_06580 PF00483 Nucleotidyl transferase HVZ88_06590 PF00534 Glycosyl transferases group 1 HVZ88_06590 PF13439 Glycosyltransferase Family 4 HVZ88_06595 PF04230 Polysaccharide pyruvyl transferase HVZ88_06605 PF02397 Bacterial sugar transferase HVZ88_06610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVZ88_06610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVZ88_06610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVZ88_06610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVZ88_06615 PF01050 Mannose-6-phosphate isomerase HVZ88_06615 PF00483 Nucleotidyl transferase HVZ88_06620 PF00534 Glycosyl transferases group 1 HVZ88_06620 PF13579 Glycosyl transferase 4-like domain HVZ88_06625 PF00293 NUDIX domain HVZ88_06630 PF01370 NAD dependent epimerase/dehydratase family HVZ88_06635 PF16363 GDP-mannose 4,6 dehydratase HVZ88_06640 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_06645 PF00535 Glycosyl transferase family 2 HVZ88_06655 PF00534 Glycosyl transferases group 1 HVZ88_06655 PF13439 Glycosyltransferase Family 4 HVZ88_06660 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_06665 PF00535 Glycosyl transferase family 2 HVZ88_06670 PF13807 G-rich domain on putative tyrosine kinase HVZ88_06670 PF02706 Chain length determinant protein HVZ88_06670 PF13614 AAA domain HVZ88_06675 PF01451 Low molecular weight phosphotyrosine protein phosphatase HVZ88_06680 PF02563 Polysaccharide biosynthesis/export protein HVZ88_06680 PF10531 SLBB domain HVZ88_06680 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HVZ88_06690 PF03471 Transporter associated domain HVZ88_06690 PF00571 CBS domain HVZ88_06690 PF03741 Integral membrane protein TerC family HVZ88_06695 PF05170 AsmA family HVZ88_06700 PF00692 dUTPase HVZ88_06705 PF00485 Phosphoribulokinase / Uridine kinase family HVZ88_06710 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_06710 PF13426 PAS domain HVZ88_06710 PF08447 PAS fold HVZ88_06710 PF05231 MASE1 HVZ88_06710 PF00563 EAL domain HVZ88_06710 PF08448 PAS fold HVZ88_06715 PF00730 HhH-GPD superfamily base excision DNA repair protein HVZ88_06715 PF06029 AlkA N-terminal domain HVZ88_06720 PF00012 Hsp70 protein HVZ88_06730 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) HVZ88_06740 PF00092 von Willebrand factor type A domain HVZ88_06755 PF13533 Biotin-lipoyl like HVZ88_06760 PF00873 AcrB/AcrD/AcrF family HVZ88_06765 PF00873 AcrB/AcrD/AcrF family HVZ88_06770 PF07690 Major Facilitator Superfamily HVZ88_06775 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_06775 PF00672 HAMP domain HVZ88_06780 PF00072 Response regulator receiver domain HVZ88_06780 PF00486 Transcriptional regulatory protein, C terminal HVZ88_06785 PF07411 Domain of unknown function (DUF1508) HVZ88_06800 PF00781 Diacylglycerol kinase catalytic domain HVZ88_06805 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_06810 PF07690 Major Facilitator Superfamily HVZ88_06815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_06815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_06820 PF01232 Mannitol dehydrogenase Rossmann domain HVZ88_06820 PF08125 Mannitol dehydrogenase C-terminal domain HVZ88_06825 PF04198 Putative sugar-binding domain HVZ88_06830 PF00356 Bacterial regulatory proteins, lacI family HVZ88_06835 PF00106 short chain dehydrogenase HVZ88_06840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_06840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_06845 PF07690 Major Facilitator Superfamily HVZ88_06850 PF01791 DeoC/LacD family aldolase HVZ88_06855 PF03825 Nucleoside H+ symporter HVZ88_06860 PF03747 ADP-ribosylglycohydrolase HVZ88_06865 PF00294 pfkB family carbohydrate kinase HVZ88_06870 PF07702 UTRA domain HVZ88_06870 PF00392 Bacterial regulatory proteins, gntR family HVZ88_06875 PF01183 Glycosyl hydrolases family 25 HVZ88_06880 PF08543 Phosphomethylpyrimidine kinase HVZ88_06885 PF02110 Hydroxyethylthiazole kinase family HVZ88_06890 PF02583 Metal-sensitive transcriptional repressor HVZ88_06895 PF03824 High-affinity nickel-transport protein HVZ88_06900 PF11776 Nickel/cobalt transporter regulator HVZ88_06905 PF00419 Fimbrial protein HVZ88_06910 PF00577 Outer membrane usher protein HVZ88_06910 PF13954 PapC N-terminal domain HVZ88_06910 PF13953 PapC C-terminal domain HVZ88_06915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_06915 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_06920 PF00419 Fimbrial protein HVZ88_06925 PF10836 Protein of unknown function (DUF2574) HVZ88_06930 PF10609 NUBPL iron-transfer P-loop NTPase HVZ88_06935 PF01588 Putative tRNA binding domain HVZ88_06935 PF09334 tRNA synthetases class I (M) HVZ88_06945 PF13569 Domain of unknown function (DUF4132) HVZ88_06955 PF07728 AAA domain (dynein-related subfamily) HVZ88_06965 PF05762 VWA domain containing CoxE-like protein HVZ88_06970 PF04434 SWIM zinc finger HVZ88_06975 PF06998 Protein of unknown function (DUF1307) HVZ88_06980 PF07308 Protein of unknown function (DUF1456) HVZ88_06985 PF04397 LytTr DNA-binding domain HVZ88_06985 PF00072 Response regulator receiver domain HVZ88_06990 PF07694 5TMR of 5TMR-LYT HVZ88_06990 PF06580 Histidine kinase HVZ88_06995 PF13411 MerR HTH family regulatory protein HVZ88_07005 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_07010 PF00005 ABC transporter HVZ88_07015 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_07020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HVZ88_07025 PF14310 Fibronectin type III-like domain HVZ88_07025 PF01915 Glycosyl hydrolase family 3 C-terminal domain HVZ88_07025 PF00933 Glycosyl hydrolase family 3 N terminal domain HVZ88_07030 PF09330 D-lactate dehydrogenase, membrane binding HVZ88_07030 PF01565 FAD binding domain HVZ88_07035 PF00768 D-alanyl-D-alanine carboxypeptidase HVZ88_07040 PF04893 Yip1 domain HVZ88_07045 PF09335 SNARE associated Golgi protein HVZ88_07055 PF02321 Outer membrane efflux protein HVZ88_07065 PF01207 Dihydrouridine synthase (Dus) HVZ88_07070 PF03788 LrgA family HVZ88_07075 PF04172 LrgB-like family HVZ88_07080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HVZ88_07080 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HVZ88_07085 PF02698 DUF218 domain HVZ88_07090 PF10808 Protein of unknown function (DUF2542) HVZ88_07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_07095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVZ88_07100 PF01180 Dihydroorotate dehydrogenase HVZ88_07105 PF02653 Branched-chain amino acid transport system / permease component HVZ88_07110 PF00005 ABC transporter HVZ88_07115 PF13407 Periplasmic binding protein domain HVZ88_07120 PF00356 Bacterial regulatory proteins, lacI family HVZ88_07125 PF04235 Protein of unknown function (DUF418) HVZ88_07130 PF01227 GTP cyclohydrolase I HVZ88_07135 PF00756 Putative esterase HVZ88_07140 PF07715 TonB-dependent Receptor Plug Domain HVZ88_07140 PF00593 TonB dependent receptor HVZ88_07145 PF00324 Amino acid permease HVZ88_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_07150 PF03466 LysR substrate binding domain HVZ88_07155 PF03601 Conserved hypothetical protein 698 HVZ88_07160 PF01261 Xylose isomerase-like TIM barrel HVZ88_07165 PF00294 pfkB family carbohydrate kinase HVZ88_07170 PF01773 Na+ dependent nucleoside transporter N-terminus HVZ88_07170 PF07662 Na+ dependent nucleoside transporter C-terminus HVZ88_07175 PF01156 Inosine-uridine preferring nucleoside hydrolase HVZ88_07180 PF00027 Cyclic nucleotide-binding domain HVZ88_07185 PF07662 Na+ dependent nucleoside transporter C-terminus HVZ88_07185 PF01773 Na+ dependent nucleoside transporter N-terminus HVZ88_07190 PF04227 Indigoidine synthase A like protein HVZ88_07195 PF00294 pfkB family carbohydrate kinase HVZ88_07200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_07200 PF02378 Phosphotransferase system, EIIC HVZ88_07205 PF00294 pfkB family carbohydrate kinase HVZ88_07210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_07210 PF00381 PTS HPr component phosphorylation site HVZ88_07215 PF07690 Major Facilitator Superfamily HVZ88_07220 PF03692 Putative zinc- or iron-chelating domain HVZ88_07225 PF01132 Elongation factor P (EF-P) OB domain HVZ88_07225 PF08207 Elongation factor P (EF-P) KOW-like domain HVZ88_07225 PF09285 Elongation factor P, C-terminal HVZ88_07230 PF08125 Mannitol dehydrogenase C-terminal domain HVZ88_07230 PF01232 Mannitol dehydrogenase Rossmann domain HVZ88_07235 PF07683 Cobalamin synthesis protein cobW C-terminal domain HVZ88_07235 PF02492 CobW/HypB/UreG, nucleotide-binding domain HVZ88_07240 PF01569 PAP2 superfamily HVZ88_07245 PF00877 NlpC/P60 family HVZ88_07250 PF12792 CSS motif domain associated with EAL HVZ88_07250 PF00563 EAL domain HVZ88_07255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_07260 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_07265 PF12911 N-terminal TM domain of oligopeptide transport permease C HVZ88_07265 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_07270 PF00005 ABC transporter HVZ88_07270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_07275 PF13989 YejG-like protein HVZ88_07280 PF07690 Major Facilitator Superfamily HVZ88_07285 PF01479 S4 domain HVZ88_07285 PF00849 RNA pseudouridylate synthase HVZ88_07290 PF00271 Helicase conserved C-terminal domain HVZ88_07290 PF04851 Type III restriction enzyme, res subunit HVZ88_07295 PF01386 Ribosomal L25p family HVZ88_07300 PF04245 37-kD nucleoid-associated bacterial protein HVZ88_07305 PF07208 Protein of unknown function (DUF1414) HVZ88_07310 PF00884 Sulfatase HVZ88_07310 PF11893 Domain of unknown function (DUF3413) HVZ88_07335 PF00196 Bacterial regulatory proteins, luxR family HVZ88_07335 PF00072 Response regulator receiver domain HVZ88_07340 PF03918 Cytochrome C biogenesis protein HVZ88_07345 PF08534 Redoxin HVZ88_07350 PF01578 Cytochrome C assembly protein HVZ88_07350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HVZ88_07355 PF03100 CcmE HVZ88_07360 PF04995 Heme exporter protein D (CcmD) HVZ88_07365 PF01578 Cytochrome C assembly protein HVZ88_07370 PF03379 CcmB protein HVZ88_07375 PF00005 ABC transporter HVZ88_07380 PF03264 NapC/NirT cytochrome c family, N-terminal region HVZ88_07385 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HVZ88_07390 PF12801 4Fe-4S binding domain HVZ88_07390 PF13237 4Fe-4S dicluster domain HVZ88_07395 PF12838 4Fe-4S dicluster domain HVZ88_07395 PF12800 4Fe-4S binding domain HVZ88_07400 PF01568 Molydopterin dinucleotide binding domain HVZ88_07400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVZ88_07400 PF00384 Molybdopterin oxidoreductase HVZ88_07405 PF03927 NapD protein HVZ88_07410 PF13187 4Fe-4S dicluster domain HVZ88_07410 PF12800 4Fe-4S binding domain HVZ88_07410 PF00037 4Fe-4S binding domain HVZ88_07420 PF03974 Ecotin HVZ88_07425 PF06039 Malate:quinone oxidoreductase (Mqo) HVZ88_07430 PF00005 ABC transporter HVZ88_07435 PF13532 2OG-Fe(II) oxygenase superfamily HVZ88_07440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HVZ88_07440 PF02805 Metal binding domain of Ada HVZ88_07440 PF12833 Helix-turn-helix domain HVZ88_07440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HVZ88_07445 PF02424 ApbE family HVZ88_07450 PF00267 Gram-negative porin HVZ88_07455 PF16359 RcsD-ABL domain HVZ88_07455 PF01627 Hpt domain HVZ88_07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_07460 PF00196 Bacterial regulatory proteins, luxR family HVZ88_07460 PF00072 Response regulator receiver domain HVZ88_07465 PF00072 Response regulator receiver domain HVZ88_07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_07465 PF09456 RcsC Alpha-Beta-Loop (ABL) HVZ88_07465 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_07470 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_07470 PF00989 PAS fold HVZ88_07475 PF00158 Sigma-54 interaction domain HVZ88_07475 PF00072 Response regulator receiver domain HVZ88_07475 PF02954 Bacterial regulatory protein, Fis family HVZ88_07480 PF01144 Coenzyme A transferase HVZ88_07485 PF01144 Coenzyme A transferase HVZ88_07490 PF02667 Short chain fatty acid transporter HVZ88_07495 PF00108 Thiolase, N-terminal domain HVZ88_07495 PF02803 Thiolase, C-terminal domain HVZ88_07500 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) HVZ88_07505 PF08486 Stage II sporulation protein HVZ88_07505 PF10062 Predicted secreted protein (DUF2300) HVZ88_07515 PF06672 Protein of unknown function (DUF1175) HVZ88_07520 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) HVZ88_07525 PF00521 DNA gyrase/topoisomerase IV, subunit A HVZ88_07525 PF03989 DNA gyrase C-terminal domain, beta-propeller HVZ88_07535 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat HVZ88_07535 PF12951 Passenger-associated-transport-repeat HVZ88_07535 PF03797 Autotransporter beta-domain HVZ88_07540 PF00317 Ribonucleotide reductase, all-alpha domain HVZ88_07540 PF02867 Ribonucleotide reductase, barrel domain HVZ88_07540 PF03477 ATP cone domain HVZ88_07545 PF00268 Ribonucleotide reductase, small chain HVZ88_07550 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_07565 PF03009 Glycerophosphoryl diester phosphodiesterase family HVZ88_07570 PF07690 Major Facilitator Superfamily HVZ88_07575 PF04324 BFD-like [2Fe-2S] binding domain HVZ88_07575 PF01266 FAD dependent oxidoreductase HVZ88_07580 PF00890 FAD binding domain HVZ88_07585 PF13183 4Fe-4S dicluster domain HVZ88_07585 PF02754 Cysteine-rich domain HVZ88_07590 PF04754 Putative transposase, YhgA-like HVZ88_07600 PF03328 HpcH/HpaI aldolase/citrate lyase family HVZ88_07605 PF07690 Major Facilitator Superfamily HVZ88_07610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVZ88_07610 PF13378 Enolase C-terminal domain-like HVZ88_07615 PF09339 IclR helix-turn-helix domain HVZ88_07615 PF01614 Bacterial transcriptional regulator HVZ88_07620 PF00994 Probable molybdopterin binding domain HVZ88_07625 PF07437 YfaZ precursor HVZ88_07630 PF00293 NUDIX domain HVZ88_07635 PF00300 Histidine phosphatase superfamily (branch 1) HVZ88_07640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HVZ88_07645 PF00535 Glycosyl transferase family 2 HVZ88_07650 PF01370 NAD dependent epimerase/dehydratase family HVZ88_07650 PF00551 Formyl transferase HVZ88_07650 PF02911 Formyl transferase, C-terminal domain HVZ88_07655 PF01522 Polysaccharide deacetylase HVZ88_07660 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HVZ88_07665 PF00892 EamA-like transporter family HVZ88_07680 PF00501 AMP-binding enzyme HVZ88_07680 PF13193 AMP-binding enzyme C-terminal domain HVZ88_07685 PF13378 Enolase C-terminal domain-like HVZ88_07690 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_07695 PF12697 Alpha/beta hydrolase family HVZ88_07700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVZ88_07700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_07700 PF16582 Middle domain of thiamine pyrophosphate HVZ88_07705 PF00425 chorismate binding enzyme HVZ88_07710 PF05957 Bacterial protein of unknown function (DUF883) HVZ88_07715 PF13673 Acetyltransferase (GNAT) domain HVZ88_07720 PF12706 Beta-lactamase superfamily domain HVZ88_07735 PF08974 Domain of unknown function (DUF1877) HVZ88_07740 PF00361 Proton-conducting membrane transporter HVZ88_07745 PF00361 Proton-conducting membrane transporter HVZ88_07750 PF00361 Proton-conducting membrane transporter HVZ88_07750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HVZ88_07755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HVZ88_07760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HVZ88_07765 PF12838 4Fe-4S dicluster domain HVZ88_07770 PF00146 NADH dehydrogenase HVZ88_07775 PF01568 Molydopterin dinucleotide binding domain HVZ88_07775 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HVZ88_07775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVZ88_07775 PF00384 Molybdopterin oxidoreductase HVZ88_07780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HVZ88_07780 PF10531 SLBB domain HVZ88_07780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HVZ88_07790 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HVZ88_07790 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HVZ88_07795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVZ88_07800 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HVZ88_07805 PF03466 LysR substrate binding domain HVZ88_07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_07810 PF00155 Aminotransferase class I and II HVZ88_07820 PF03600 Citrate transporter HVZ88_07820 PF02080 TrkA-C domain HVZ88_07825 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_07830 PF03887 YfbU domain HVZ88_07835 PF04217 Protein of unknown function, DUF412 HVZ88_07840 PF00871 Acetokinase family HVZ88_07845 PF01515 Phosphate acetyl/butaryl transferase HVZ88_07845 PF07085 DRTGG domain HVZ88_07850 PF03606 C4-dicarboxylate anaerobic carrier HVZ88_07855 PF00293 NUDIX domain HVZ88_07860 PF12850 Calcineurin-like phosphoesterase superfamily domain HVZ88_07865 PF14834 Glutathione S-transferase, C-terminal domain HVZ88_07865 PF02798 Glutathione S-transferase, N-terminal domain HVZ88_07870 PF00043 Glutathione S-transferase, C-terminal domain HVZ88_07870 PF02798 Glutathione S-transferase, N-terminal domain HVZ88_07875 PF02152 Dihydroneopterin aldolase HVZ88_07880 PF01370 NAD dependent epimerase/dehydratase family HVZ88_07880 PF08338 Domain of unknown function (DUF1731) HVZ88_07885 PF04754 Putative transposase, YhgA-like HVZ88_07890 PF00005 ABC transporter HVZ88_07895 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_07900 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_07905 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_07910 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_07915 PF02441 Flavoprotein HVZ88_07920 PF00156 Phosphoribosyl transferase domain HVZ88_07925 PF02674 Colicin V production protein HVZ88_07930 PF05036 Sporulation related domain HVZ88_07935 PF08245 Mur ligase middle domain HVZ88_07935 PF02875 Mur ligase family, glutamate ligase domain HVZ88_07940 PF01039 Carboxyl transferase domain HVZ88_07940 PF17848 Acetyl-coA carboxylase zinc finger domain HVZ88_07945 PF09335 SNARE associated Golgi protein HVZ88_07950 PF01416 tRNA pseudouridine synthase HVZ88_07955 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVZ88_07955 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVZ88_07960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVZ88_07960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVZ88_07960 PF11890 Domain of unknown function (DUF3410) HVZ88_07970 PF07690 Major Facilitator Superfamily HVZ88_07975 PF00109 Beta-ketoacyl synthase, N-terminal domain HVZ88_07975 PF02801 Beta-ketoacyl synthase, C-terminal domain HVZ88_07980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HVZ88_07980 PF01266 FAD dependent oxidoreductase HVZ88_07985 PF08891 YfcL protein HVZ88_07990 PF04315 Elongation factor P hydroxylase HVZ88_07995 PF01925 Sulfite exporter TauE/SafE HVZ88_08000 PF03411 Penicillin-insensitive murein endopeptidase HVZ88_08005 PF01264 Chorismate synthase HVZ88_08010 PF05175 Methyltransferase small domain HVZ88_08015 PF01713 Smr domain HVZ88_08020 PF11245 Protein of unknown function (DUF2544) HVZ88_08025 PF00419 Fimbrial protein HVZ88_08030 PF00419 Fimbrial protein HVZ88_08035 PF00419 Fimbrial protein HVZ88_08040 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_08040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_08045 PF00577 Outer membrane usher protein HVZ88_08045 PF13954 PapC N-terminal domain HVZ88_08045 PF13953 PapC C-terminal domain HVZ88_08050 PF00419 Fimbrial protein HVZ88_08055 PF00300 Histidine phosphatase superfamily (branch 1) HVZ88_08060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HVZ88_08060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HVZ88_08060 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_08065 PF00108 Thiolase, N-terminal domain HVZ88_08065 PF02803 Thiolase, C-terminal domain HVZ88_08070 PF04175 Protein of unknown function (DUF406) HVZ88_08075 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HVZ88_08085 PF04333 MlaA lipoprotein HVZ88_08090 PF01226 Formate/nitrite transporter HVZ88_08110 PF02447 GntP family permease HVZ88_08115 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_08120 PF07690 Major Facilitator Superfamily HVZ88_08125 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_08125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_08130 PF00196 Bacterial regulatory proteins, luxR family HVZ88_08130 PF00072 Response regulator receiver domain HVZ88_08135 PF00072 Response regulator receiver domain HVZ88_08135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_08135 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_08135 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_08135 PF01627 Hpt domain HVZ88_08140 PF02515 CoA-transferase family III HVZ88_08145 PF03547 Membrane transport protein HVZ88_08150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVZ88_08150 PF00205 Thiamine pyrophosphate enzyme, central domain HVZ88_08150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_08155 PF02515 CoA-transferase family III HVZ88_08160 PF10938 YfdX protein HVZ88_08170 PF10810 Protein of unknown function (DUF2545) HVZ88_08175 PF03279 Bacterial lipid A biosynthesis acyltransferase HVZ88_08185 PF00155 Aminotransferase class I and II HVZ88_08190 PF07694 5TMR of 5TMR-LYT HVZ88_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_08190 PF06580 Histidine kinase HVZ88_08195 PF04397 LytTr DNA-binding domain HVZ88_08195 PF00072 Response regulator receiver domain HVZ88_08200 PF12833 Helix-turn-helix domain HVZ88_08205 PF05524 PEP-utilising enzyme, N-terminal HVZ88_08205 PF00391 PEP-utilising enzyme, mobile domain HVZ88_08205 PF02896 PEP-utilising enzyme, TIM barrel domain HVZ88_08205 PF00381 PTS HPr component phosphorylation site HVZ88_08205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_08210 PF05343 M42 glutamyl aminopeptidase HVZ88_08215 PF00557 Metallopeptidase family M24 HVZ88_08215 PF01321 Creatinase/Prolidase N-terminal domain HVZ88_08220 PF02378 Phosphotransferase system, EIIC HVZ88_08225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_08230 PF02685 Glucokinase HVZ88_08235 PF00654 Voltage gated chloride channel HVZ88_08240 PF10697 Protein of unknown function (DUF2502) HVZ88_08245 PF01566 Natural resistance-associated macrophage protein HVZ88_08250 PF07662 Na+ dependent nucleoside transporter C-terminus HVZ88_08250 PF01773 Na+ dependent nucleoside transporter N-terminus HVZ88_08250 PF07670 Nucleoside recognition HVZ88_08255 PF05231 MASE1 HVZ88_08255 PF00563 EAL domain HVZ88_08270 PF07037 Putative transcription regulator (DUF1323) HVZ88_08275 PF07037 Putative transcription regulator (DUF1323) HVZ88_08280 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVZ88_08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_08305 PF03466 LysR substrate binding domain HVZ88_08315 PF03825 Nucleoside H+ symporter HVZ88_08320 PF01048 Phosphorylase superfamily HVZ88_08325 PF03502 Nucleoside-specific channel-forming protein, Tsx HVZ88_08330 PF03466 LysR substrate binding domain HVZ88_08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_08335 PF13593 SBF-like CPA transporter family (DUF4137) HVZ88_08340 PF12843 Putative quorum-sensing-regulated virulence factor HVZ88_08345 PF12826 Helix-hairpin-helix motif HVZ88_08345 PF01653 NAD-dependent DNA ligase adenylation domain HVZ88_08345 PF03120 NAD-dependent DNA ligase OB-fold domain HVZ88_08345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HVZ88_08345 PF00533 BRCA1 C Terminus (BRCT) domain HVZ88_08350 PF04354 ZipA, C-terminal FtsZ-binding domain HVZ88_08360 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_08365 PF00381 PTS HPr component phosphorylation site HVZ88_08370 PF05524 PEP-utilising enzyme, N-terminal HVZ88_08370 PF02896 PEP-utilising enzyme, TIM barrel domain HVZ88_08370 PF00391 PEP-utilising enzyme, mobile domain HVZ88_08375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HVZ88_08380 PF08543 Phosphomethylpyrimidine kinase HVZ88_08385 PF17263 Family of unknown function (DUF5329) HVZ88_08390 PF05406 WGR domain HVZ88_08395 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_08400 PF00005 ABC transporter HVZ88_08405 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_08410 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_08425 PF01380 SIS domain HVZ88_08425 PF01418 Helix-turn-helix domain, rpiR family HVZ88_08430 PF01380 SIS domain HVZ88_08435 PF00367 phosphotransferase system, EIIB HVZ88_08435 PF02378 Phosphotransferase system, EIIC HVZ88_08440 PF00144 Beta-lactamase HVZ88_08445 PF04261 Dyp-type peroxidase family HVZ88_08450 PF06572 Protein of unknown function (DUF1131) HVZ88_08455 PF11143 Protein of unknown function (DUF2919) HVZ88_08460 PF00583 Acetyltransferase (GNAT) family HVZ88_08465 PF01520 N-acetylmuramoyl-L-alanine amidase HVZ88_08470 PF01218 Coproporphyrinogen III oxidase HVZ88_08475 PF12833 Helix-turn-helix domain HVZ88_08480 PF16365 Ethanolamine utilization protein EutK C-terminus HVZ88_08480 PF00936 BMC domain HVZ88_08485 PF00936 BMC domain HVZ88_08490 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HVZ88_08495 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HVZ88_08500 PF06277 Ethanolamine utilisation protein EutA HVZ88_08505 PF04346 Ethanolamine utilisation protein, EutH HVZ88_08510 PF00465 Iron-containing alcohol dehydrogenase HVZ88_08520 PF00171 Aldehyde dehydrogenase family HVZ88_08525 PF03319 Ethanolamine utilisation protein EutN/carboxysome HVZ88_08530 PF00936 BMC domain HVZ88_08535 PF01515 Phosphate acetyl/butaryl transferase HVZ88_08540 PF01923 Cobalamin adenosyltransferase HVZ88_08545 PF06249 Ethanolamine utilisation protein EutQ HVZ88_08550 PF10662 Ethanolamine utilisation - propanediol utilisation HVZ88_08555 PF00936 BMC domain HVZ88_08560 PF00390 Malic enzyme, N-terminal domain HVZ88_08560 PF01515 Phosphate acetyl/butaryl transferase HVZ88_08560 PF03949 Malic enzyme, NAD binding domain HVZ88_08565 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVZ88_08570 PF00456 Transketolase, thiamine diphosphate binding domain HVZ88_08570 PF02780 Transketolase, C-terminal domain HVZ88_08570 PF02779 Transketolase, pyrimidine binding domain HVZ88_08575 PF06674 Protein of unknown function (DUF1176) HVZ88_08580 PF00293 NUDIX domain HVZ88_08585 PF13247 4Fe-4S dicluster domain HVZ88_08585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVZ88_08585 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_08590 PF07730 Histidine kinase HVZ88_08590 PF00672 HAMP domain HVZ88_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_08590 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HVZ88_08595 PF00873 AcrB/AcrD/AcrF family HVZ88_08605 PF03960 ArsC family HVZ88_08610 PF07687 Peptidase dimerisation domain HVZ88_08610 PF01546 Peptidase family M20/M25/M40 HVZ88_08615 PF13980 Uncharacterised protein family (UPF0370) HVZ88_08620 PF02230 Phospholipase/Carboxylesterase HVZ88_08625 PF05127 Helicase HVZ88_08625 PF17176 tRNA-binding domain HVZ88_08625 PF08351 Domain of unknown function (DUF1726) HVZ88_08625 PF13718 GNAT acetyltransferase 2 HVZ88_08630 PF04228 Putative neutral zinc metallopeptidase HVZ88_08635 PF01259 SAICAR synthetase HVZ88_08640 PF06804 NlpB/DapX lipoprotein HVZ88_08645 PF00701 Dihydrodipicolinate synthetase family HVZ88_08650 PF01842 ACT domain HVZ88_08655 PF00578 AhpC/TSA family HVZ88_08660 PF00037 4Fe-4S binding domain HVZ88_08660 PF12798 4Fe-4S binding domain HVZ88_08670 PF00146 NADH dehydrogenase HVZ88_08675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HVZ88_08675 PF00361 Proton-conducting membrane transporter HVZ88_08680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HVZ88_08685 PF00361 Proton-conducting membrane transporter HVZ88_08685 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HVZ88_08690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HVZ88_08690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HVZ88_08690 PF00374 Nickel-dependent hydrogenase HVZ88_08695 PF12838 4Fe-4S dicluster domain HVZ88_08700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVZ88_08705 PF07450 Formate hydrogenlyase maturation protein HycH HVZ88_08710 PF01590 GAF domain HVZ88_08710 PF00158 Sigma-54 interaction domain HVZ88_08715 PF01226 Formate/nitrite transporter HVZ88_08720 PF01594 AI-2E family transporter HVZ88_08725 PF01435 Peptidase family M48 HVZ88_08730 PF03960 ArsC family HVZ88_08735 PF00308 Bacterial dnaA protein HVZ88_08740 PF00860 Permease family HVZ88_08750 PF02769 AIR synthase related protein, C-terminal domain HVZ88_08750 PF00586 AIR synthase related protein, N-terminal domain HVZ88_08755 PF00551 Formyl transferase HVZ88_08760 PF13090 Polyphosphate kinase C-terminal domain 2 HVZ88_08760 PF02503 Polyphosphate kinase middle domain HVZ88_08760 PF13089 Polyphosphate kinase N-terminal domain HVZ88_08760 PF17941 Polyphosphate kinase C-terminal domain 1 HVZ88_08765 PF02541 Ppx/GppA phosphatase family HVZ88_08770 PF05231 MASE1 HVZ88_08770 PF00563 EAL domain HVZ88_08780 PF11119 Protein of unknown function (DUF2633) HVZ88_08785 PF05433 Glycine zipper 2TM domain HVZ88_08790 PF17358 Family of unknown function (DUF5384) HVZ88_08795 PF02540 NAD synthase HVZ88_08795 PF00958 GMP synthase C terminal domain HVZ88_08795 PF00117 Glutamine amidotransferase class-I HVZ88_08800 PF00571 CBS domain HVZ88_08800 PF00478 IMP dehydrogenase / GMP reductase domain HVZ88_08805 PF02601 Exonuclease VII, large subunit HVZ88_08805 PF13742 OB-fold nucleic acid binding domain HVZ88_08810 PF07191 zinc-ribbons HVZ88_08815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HVZ88_08815 PF01926 50S ribosome-binding GTPase HVZ88_08820 PF13360 PQQ-like domain HVZ88_08825 PF09976 Tetratricopeptide repeat-like domain HVZ88_08830 PF13393 Histidyl-tRNA synthetase HVZ88_08830 PF03129 Anticodon binding domain HVZ88_08835 PF04551 GcpE protein HVZ88_08840 PF13464 Domain of unknown function (DUF4115) HVZ88_08845 PF04055 Radical SAM superfamily HVZ88_08850 PF00334 Nucleoside diphosphate kinase HVZ88_08855 PF00912 Transglycosylase HVZ88_08855 PF00905 Penicillin binding protein transpeptidase domain HVZ88_08855 PF06832 Penicillin-Binding Protein C-terminus Family HVZ88_08860 PF17962 Bacterial macroglobulin domain 6 HVZ88_08860 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HVZ88_08860 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HVZ88_08860 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HVZ88_08860 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HVZ88_08860 PF07678 A-macroglobulin TED domain HVZ88_08860 PF07703 Alpha-2-macroglobulin bait region domain HVZ88_08860 PF00207 Alpha-2-macroglobulin family HVZ88_08860 PF01835 MG2 domain HVZ88_08865 PF00581 Rhodanese-like domain HVZ88_08870 PF07179 SseB protein N-terminal domain HVZ88_08870 PF14581 SseB protein C-terminal domain HVZ88_08875 PF00883 Cytosol aminopeptidase family, catalytic domain HVZ88_08875 PF12404 Peptidase HVZ88_08880 PF04384 Iron-sulphur cluster assembly HVZ88_08885 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_08890 PF00012 Hsp70 protein HVZ88_08895 PF07743 HSCB C-terminal oligomerisation domain HVZ88_08900 PF01521 Iron-sulphur cluster biosynthesis HVZ88_08905 PF01592 NifU-like N terminal domain HVZ88_08910 PF00266 Aminotransferase class-V HVZ88_08915 PF02082 Transcriptional regulator HVZ88_08920 PF00588 SpoU rRNA Methylase family HVZ88_08925 PF00459 Inositol monophosphatase family HVZ88_08930 PF12146 Serine aminopeptidase, S33 HVZ88_08935 PF01609 Transposase DDE domain HVZ88_08945 PF12832 MFS_1 like family HVZ88_08950 PF03466 LysR substrate binding domain HVZ88_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_08955 PF00355 Rieske [2Fe-2S] domain HVZ88_08955 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HVZ88_08960 PF00866 Ring hydroxylating beta subunit HVZ88_08965 PF00355 Rieske [2Fe-2S] domain HVZ88_08970 PF00106 short chain dehydrogenase HVZ88_08975 PF14759 Reductase C-terminal HVZ88_08975 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_08980 PF07681 DoxX HVZ88_08985 PF01263 Aldose 1-epimerase HVZ88_08990 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_08990 PF00107 Zinc-binding dehydrogenase HVZ88_08995 PF02653 Branched-chain amino acid transport system / permease component HVZ88_09000 PF00005 ABC transporter HVZ88_09005 PF01609 Transposase DDE domain HVZ88_09010 PF00005 ABC transporter HVZ88_09015 PF13407 Periplasmic binding protein domain HVZ88_09020 PF13181 Tetratricopeptide repeat HVZ88_09020 PF17128 Domain of unknown function (DUF5107) HVZ88_09025 PF00480 ROK family HVZ88_09030 PF00464 Serine hydroxymethyltransferase HVZ88_09035 PF00175 Oxidoreductase NAD-binding domain HVZ88_09035 PF00042 Globin HVZ88_09035 PF00970 Oxidoreductase FAD-binding domain HVZ88_09040 PF00543 Nitrogen regulatory protein P-II HVZ88_09045 PF00158 Sigma-54 interaction domain HVZ88_09045 PF00072 Response regulator receiver domain HVZ88_09050 PF13942 YfhG lipoprotein HVZ88_09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_09055 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_09060 PF02769 AIR synthase related protein, C-terminal domain HVZ88_09060 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HVZ88_09060 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HVZ88_09065 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_09065 PF01464 Transglycosylase SLT domain HVZ88_09070 PF14437 MafB19-like deaminase HVZ88_09080 PF01380 SIS domain HVZ88_09080 PF01418 Helix-turn-helix domain, rpiR family HVZ88_09085 PF12838 4Fe-4S dicluster domain HVZ88_09095 PF01648 4'-phosphopantetheinyl transferase superfamily HVZ88_09100 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HVZ88_09105 PF02565 Recombination protein O C terminal HVZ88_09105 PF11967 Recombination protein O N terminal HVZ88_09110 PF07650 KH domain HVZ88_09110 PF01926 50S ribosome-binding GTPase HVZ88_09115 PF14622 Ribonuclease-III-like HVZ88_09115 PF00035 Double-stranded RNA binding motif HVZ88_09120 PF10502 Signal peptidase, peptidase S26 HVZ88_09125 PF00679 Elongation factor G C-terminus HVZ88_09125 PF00009 Elongation factor Tu GTP binding domain HVZ88_09125 PF06421 GTP-binding protein LepA C-terminus HVZ88_09125 PF03144 Elongation factor Tu domain 2 HVZ88_09135 PF03888 MucB/RseB N-terminal domain HVZ88_09135 PF17188 MucB/RseB C-terminal domain HVZ88_09140 PF03872 Anti sigma-E protein RseA, N-terminal domain HVZ88_09140 PF03873 Anti sigma-E protein RseA, C-terminal domain HVZ88_09145 PF08281 Sigma-70, region 4 HVZ88_09145 PF04542 Sigma-70 region 2 HVZ88_09155 PF00890 FAD binding domain HVZ88_09155 PF02910 Fumarate reductase flavoprotein C-term HVZ88_09160 PF05175 Methyltransferase small domain HVZ88_09165 PF00271 Helicase conserved C-terminal domain HVZ88_09165 PF00270 DEAD/DEAH box helicase HVZ88_09170 PF03466 LysR substrate binding domain HVZ88_09170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_09175 PF01810 LysE type translocator HVZ88_09180 PF01228 Glycine radical HVZ88_09185 PF03167 Uracil DNA glycosylase superfamily HVZ88_09190 PF00588 SpoU rRNA Methylase family HVZ88_09190 PF08032 RNA 2'-O ribose methyltransferase substrate binding HVZ88_09195 PF00085 Thioredoxin HVZ88_09205 PF13380 CoA binding domain HVZ88_09205 PF00583 Acetyltransferase (GNAT) family HVZ88_09205 PF13607 Succinyl-CoA ligase like flavodoxin domain HVZ88_09210 PF13091 PLD-like domain HVZ88_09215 PF10043 Predicted periplasmic lipoprotein (DUF2279) HVZ88_09220 PF00083 Sugar (and other) transporter HVZ88_09245 PF10431 C-terminal, D2-small domain, of ClpB protein HVZ88_09245 PF02861 Clp amino terminal domain, pathogenicity island component HVZ88_09245 PF07724 AAA domain (Cdc48 subfamily) HVZ88_09245 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_09245 PF17871 AAA lid domain HVZ88_09255 PF01479 S4 domain HVZ88_09255 PF00849 RNA pseudouridylate synthase HVZ88_09260 PF13525 Outer membrane lipoprotein HVZ88_09265 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HVZ88_09275 PF01817 Chorismate mutase type II HVZ88_09275 PF00800 Prephenate dehydratase HVZ88_09280 PF01817 Chorismate mutase type II HVZ88_09280 PF02153 Prephenate dehydrogenase HVZ88_09285 PF00793 DAHP synthetase I family HVZ88_09290 PF10973 Protein of unknown function (DUF2799) HVZ88_09295 PF13689 YfiR/HmsC-like HVZ88_09300 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_09300 PF17152 Periplasmic sensor domain HVZ88_09305 PF00691 OmpA family HVZ88_09310 PF01245 Ribosomal protein L19 HVZ88_09315 PF01746 tRNA (Guanine-1)-methyltransferase HVZ88_09320 PF01782 RimM N-terminal domain HVZ88_09320 PF05239 PRC-barrel domain HVZ88_09325 PF00886 Ribosomal protein S16 HVZ88_09330 PF00448 SRP54-type protein, GTPase domain HVZ88_09330 PF02881 SRP54-type protein, helical bundle domain HVZ88_09330 PF02978 Signal peptide binding domain HVZ88_09335 PF01578 Cytochrome C assembly protein HVZ88_09340 PF00571 CBS domain HVZ88_09340 PF03471 Transporter associated domain HVZ88_09340 PF01595 Cyclin M transmembrane N-terminal domain HVZ88_09345 PF01025 GrpE HVZ88_09350 PF01513 ATP-NAD kinase HVZ88_09355 PF02463 RecF/RecN/SMC N terminal domain HVZ88_09360 PF04355 SmpA / OmlA family HVZ88_09365 PF03658 RnfH family Ubiquitin HVZ88_09370 PF03364 Polyketide cyclase / dehydrase and lipid transport HVZ88_09375 PF01668 SmpB protein HVZ88_09390 PF04606 Ogr/Delta-like zinc finger HVZ88_09425 PF04984 Phage tail sheath protein subtilisin-like domain HVZ88_09425 PF17482 Phage tail sheath C-terminal domain HVZ88_09430 PF00239 Resolvase, N terminal domain HVZ88_09430 PF02796 Helix-turn-helix domain of resolvase HVZ88_09435 PF07484 Phage Tail Collar Domain HVZ88_09440 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_09445 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_09550 PF06183 DinI-like family HVZ88_09560 PF05840 Bacteriophage replication gene A protein (GPA) HVZ88_09565 PF02086 D12 class N6 adenine-specific DNA methyltransferase HVZ88_09570 PF01258 Prokaryotic dksA/traR C4-type zinc finger HVZ88_09580 PF17282 Family of unknown function (DUF5347) HVZ88_09590 PF06892 Phage regulatory protein CII (CP76) HVZ88_09600 PF07022 Bacteriophage CI repressor helix-turn-helix domain HVZ88_09600 PF16452 Bacteriophage CI repressor C-terminal domain HVZ88_09605 PF00589 Phage integrase family HVZ88_09605 PF02899 Phage integrase, N-terminal SAM-like domain HVZ88_09615 PF00589 Phage integrase family HVZ88_09615 PF13356 Arm DNA-binding domain HVZ88_09625 PF17762 HTH domain found in ParB protein HVZ88_09625 PF02195 ParB-like nuclease domain HVZ88_09640 PF00128 Alpha amylase, catalytic domain HVZ88_09650 PF08943 CsiD HVZ88_09655 PF01266 FAD dependent oxidoreductase HVZ88_09660 PF00171 Aldehyde dehydrogenase family HVZ88_09665 PF00202 Aminotransferase class-III HVZ88_09670 PF00324 Amino acid permease HVZ88_09675 PF07729 FCD domain HVZ88_09675 PF00392 Bacterial regulatory proteins, gntR family HVZ88_09680 PF04972 BON domain HVZ88_09680 PF01476 LysM domain HVZ88_09685 PF01679 Proteolipid membrane potential modulator HVZ88_09690 PF01022 Bacterial regulatory protein, arsR family HVZ88_09695 PF11127 Protein of unknown function (DUF2892) HVZ88_09695 PF00581 Rhodanese-like domain HVZ88_09700 PF00816 H-NS histone family HVZ88_09705 PF06610 L-alanine exporter HVZ88_09710 PF09400 Protein of unknown function (DUF2002) HVZ88_09715 PF05957 Bacterial protein of unknown function (DUF883) HVZ88_09720 PF00462 Glutaredoxin HVZ88_09725 PF07972 NrdI Flavodoxin like HVZ88_09730 PF02867 Ribonucleotide reductase, barrel domain HVZ88_09730 PF00317 Ribonucleotide reductase, all-alpha domain HVZ88_09730 PF08343 Ribonucleotide reductase N-terminal HVZ88_09735 PF00268 Ribonucleotide reductase, small chain HVZ88_09740 PF00571 CBS domain HVZ88_09740 PF00005 ABC transporter HVZ88_09745 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_09750 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HVZ88_09755 PF07690 Major Facilitator Superfamily HVZ88_09760 PF03591 AzlC protein HVZ88_09765 PF05437 Branched-chain amino acid transport protein (AzlD) HVZ88_09770 PF01047 MarR family HVZ88_09775 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_09775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_09780 PF07690 Major Facilitator Superfamily HVZ88_09785 PF02664 S-Ribosylhomocysteinase (LuxS) HVZ88_09790 PF04262 Glutamate-cysteine ligase HVZ88_09795 PF09335 SNARE associated Golgi protein HVZ88_09800 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_09830 PF02599 Global regulator protein family HVZ88_09835 PF02272 DHHA1 domain HVZ88_09835 PF01411 tRNA synthetases class II (A) HVZ88_09835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HVZ88_09840 PF02631 RecX family HVZ88_09845 PF00154 recA bacterial DNA recombination protein HVZ88_09850 PF02464 Competence-damaged protein HVZ88_09855 PF13406 Transglycosylase SLT domain HVZ88_09860 PF03608 PTS system enzyme II sorbitol-specific factor HVZ88_09875 PF00106 short chain dehydrogenase HVZ88_09880 PF06923 Glucitol operon activator protein (GutM) HVZ88_09885 PF00455 DeoR C terminal sensor domain HVZ88_09885 PF08220 DeoR-like helix-turn-helix domain HVZ88_09890 PF01380 SIS domain HVZ88_09890 PF00571 CBS domain HVZ88_09895 PF01590 GAF domain HVZ88_09895 PF00158 Sigma-54 interaction domain HVZ88_09900 PF00258 Flavodoxin HVZ88_09900 PF00753 Metallo-beta-lactamase superfamily HVZ88_09900 PF00301 Rubredoxin HVZ88_09905 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_09905 PF18113 Rubredoxin binding C-terminal domain HVZ88_09910 PF00708 Acylphosphatase HVZ88_09910 PF01300 Telomere recombination HVZ88_09910 PF07503 HypF finger HVZ88_09910 PF17788 HypF Kae1-like domain HVZ88_09915 PF13247 4Fe-4S dicluster domain HVZ88_09915 PF12800 4Fe-4S binding domain HVZ88_09920 PF00356 Bacterial regulatory proteins, lacI family HVZ88_09925 PF00367 phosphotransferase system, EIIB HVZ88_09925 PF02378 Phosphotransferase system, EIIC HVZ88_09930 PF00232 Glycosyl hydrolase family 1 HVZ88_09935 PF01750 Hydrogenase maturation protease HVZ88_09940 PF07450 Formate hydrogenlyase maturation protein HycH HVZ88_09945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVZ88_09950 PF12838 4Fe-4S dicluster domain HVZ88_09955 PF00374 Nickel-dependent hydrogenase HVZ88_09955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HVZ88_09955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HVZ88_09960 PF00146 NADH dehydrogenase HVZ88_09965 PF00361 Proton-conducting membrane transporter HVZ88_09970 PF13247 4Fe-4S dicluster domain HVZ88_09975 PF11046 Transcriptional repressor of hyc and hyp operons HVZ88_09980 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HVZ88_09985 PF02492 CobW/HypB/UreG, nucleotide-binding domain HVZ88_09990 PF01455 HupF/HypC family HVZ88_09995 PF01924 Hydrogenase formation hypA family HVZ88_10000 PF02769 AIR synthase related protein, C-terminal domain HVZ88_10000 PF00586 AIR synthase related protein, N-terminal domain HVZ88_10005 PF00158 Sigma-54 interaction domain HVZ88_10005 PF01590 GAF domain HVZ88_10010 PF11756 Nitrous oxide-stimulated promoter HVZ88_10020 PF00488 MutS domain V HVZ88_10020 PF01624 MutS domain I HVZ88_10020 PF05190 MutS family domain IV HVZ88_10020 PF05188 MutS domain II HVZ88_10020 PF05192 MutS domain III HVZ88_10025 PF00149 Calcineurin-like phosphoesterase HVZ88_10030 PF08220 DeoR-like helix-turn-helix domain HVZ88_10030 PF00455 DeoR C terminal sensor domain HVZ88_10035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVZ88_10035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HVZ88_10040 PF07005 Sugar-binding N-terminal domain HVZ88_10040 PF17042 Nucleotide-binding C-terminal domain HVZ88_10045 PF00596 Class II Aldolase and Adducin N-terminal domain HVZ88_10050 PF01261 Xylose isomerase-like TIM barrel HVZ88_10055 PF02447 GntP family permease HVZ88_10060 PF00140 Sigma-70 factor, region 1.2 HVZ88_10060 PF04545 Sigma-70, region 4 HVZ88_10060 PF04542 Sigma-70 region 2 HVZ88_10060 PF04539 Sigma-70 region 3 HVZ88_10065 PF01476 LysM domain HVZ88_10065 PF01551 Peptidase family M23 HVZ88_10075 PF01975 Survival protein SurE HVZ88_10080 PF01142 tRNA pseudouridine synthase D (TruD) HVZ88_10085 PF02542 YgbB family HVZ88_10090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HVZ88_10095 PF04977 Septum formation initiator HVZ88_10100 PF12084 Protein of unknown function (DUF3561) HVZ88_10110 PF00009 Elongation factor Tu GTP binding domain HVZ88_10115 PF01507 Phosphoadenosine phosphosulfate reductase family HVZ88_10120 PF04389 Peptidase family M28 HVZ88_10125 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) HVZ88_10135 PF01609 Transposase DDE domain HVZ88_10140 PF01848 Hok/gef family HVZ88_10145 PF01507 Phosphoadenosine phosphosulfate reductase family HVZ88_10150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HVZ88_10150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HVZ88_10155 PF00258 Flavodoxin HVZ88_10155 PF00175 Oxidoreductase NAD-binding domain HVZ88_10155 PF00667 FAD binding domain HVZ88_10160 PF01242 6-pyruvoyl tetrahydropterin synthase HVZ88_10165 PF01266 FAD dependent oxidoreductase HVZ88_10175 PF04309 Glycerol-3-phosphate responsive antiterminator HVZ88_10180 PF00766 Electron transfer flavoprotein FAD-binding domain HVZ88_10180 PF01012 Electron transfer flavoprotein domain HVZ88_10185 PF01012 Electron transfer flavoprotein domain HVZ88_10190 PF00083 Sugar (and other) transporter HVZ88_10195 PF01565 FAD binding domain HVZ88_10195 PF02913 FAD linked oxidases, C-terminal domain HVZ88_10205 PF07690 Major Facilitator Superfamily HVZ88_10210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_10210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_10215 PF04055 Radical SAM superfamily HVZ88_10225 PF04536 TPM domain HVZ88_10230 PF00113 Enolase, C-terminal TIM barrel domain HVZ88_10230 PF03952 Enolase, N-terminal domain HVZ88_10235 PF06418 CTP synthase N-terminus HVZ88_10235 PF00117 Glutamine amidotransferase class-I HVZ88_10240 PF03819 MazG nucleotide pyrophosphohydrolase domain HVZ88_10245 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HVZ88_10250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HVZ88_10255 PF04607 Region found in RelA / SpoT proteins HVZ88_10255 PF13291 ACT domain HVZ88_10255 PF02824 TGS domain HVZ88_10260 PF01938 TRAM domain HVZ88_10260 PF05958 tRNA (Uracil-5-)-methyltransferase HVZ88_10265 PF00672 HAMP domain HVZ88_10265 PF00072 Response regulator receiver domain HVZ88_10265 PF01627 Hpt domain HVZ88_10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_10265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HVZ88_10265 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_10270 PF13378 Enolase C-terminal domain-like HVZ88_10275 PF13378 Enolase C-terminal domain-like HVZ88_10275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVZ88_10280 PF07690 Major Facilitator Superfamily HVZ88_10285 PF00258 Flavodoxin HVZ88_10290 PF00849 RNA pseudouridylate synthase HVZ88_10295 PF04287 tRNA pseudouridine synthase C HVZ88_10300 PF07348 Syd protein (SUKH-2) HVZ88_10305 PF14489 QueF-like protein HVZ88_10305 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HVZ88_10310 PF03641 Possible lysine decarboxylase HVZ88_10310 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HVZ88_10310 PF11892 Domain of unknown function (DUF3412) HVZ88_10320 PF03313 Serine dehydratase alpha chain HVZ88_10320 PF03315 Serine dehydratase beta chain HVZ88_10325 PF01367 5'-3' exonuclease, C-terminal SAM fold HVZ88_10325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HVZ88_10330 PF00465 Iron-containing alcohol dehydrogenase HVZ88_10335 PF00596 Class II Aldolase and Adducin N-terminal domain HVZ88_10345 PF07882 L-fucose isomerase, second N-terminal domain HVZ88_10345 PF07881 L-fucose isomerase, first N-terminal domain HVZ88_10345 PF02952 L-fucose isomerase, C-terminal domain HVZ88_10350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_10350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_10355 PF05025 RbsD / FucU transport protein family HVZ88_10360 PF08220 DeoR-like helix-turn-helix domain HVZ88_10360 PF00455 DeoR C terminal sensor domain HVZ88_10365 PF18125 RlmM ferredoxin-like domain HVZ88_10365 PF01728 FtsJ-like methyltransferase HVZ88_10370 PF04241 Protein of unknown function (DUF423) HVZ88_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_10375 PF03466 LysR substrate binding domain HVZ88_10380 PF06004 Bacterial protein of unknown function (DUF903) HVZ88_10385 PF00266 Aminotransferase class-V HVZ88_10390 PF02657 Fe-S metabolism associated domain HVZ88_10395 PF00899 ThiF family HVZ88_10400 PF06725 3D domain HVZ88_10400 PF03562 MltA specific insert domain HVZ88_10420 PF11741 AMIN domain HVZ88_10420 PF01520 N-acetylmuramoyl-L-alanine amidase HVZ88_10425 PF00583 Acetyltransferase (GNAT) family HVZ88_10425 PF00696 Amino acid kinase family HVZ88_10430 PF13538 UvrD-like helicase C-terminal domain HVZ88_10435 PF00580 UvrD/REP helicase N-terminal domain HVZ88_10435 PF12705 PD-(D/E)XK nuclease superfamily HVZ88_10435 PF13361 UvrD-like helicase C-terminal domain HVZ88_10440 PF05193 Peptidase M16 inactive domain HVZ88_10440 PF16187 Middle or third domain of peptidase_M16 HVZ88_10440 PF00675 Insulinase (Peptidase family M16) HVZ88_10445 PF17946 RecC C-terminal domain HVZ88_10450 PF07963 Prokaryotic N-terminal methylation motif HVZ88_10450 PF12528 Type II secretion prepilin peptidase dependent protein C HVZ88_10455 PF10713 Protein of unknown function (DUF2509) HVZ88_10460 PF07963 Prokaryotic N-terminal methylation motif HVZ88_10465 PF07963 Prokaryotic N-terminal methylation motif HVZ88_10470 PF00303 Thymidylate synthase HVZ88_10475 PF01790 Prolipoprotein diacylglyceryl transferase HVZ88_10480 PF02896 PEP-utilising enzyme, TIM barrel domain HVZ88_10480 PF00391 PEP-utilising enzyme, mobile domain HVZ88_10480 PF01590 GAF domain HVZ88_10480 PF05524 PEP-utilising enzyme, N-terminal HVZ88_10485 PF00293 NUDIX domain HVZ88_10490 PF02976 DNA mismatch repair enzyme MutH HVZ88_10495 PF03741 Integral membrane protein TerC family HVZ88_10500 PF06004 Bacterial protein of unknown function (DUF903) HVZ88_10505 PF00248 Aldo/keto reductase family HVZ88_10510 PF07690 Major Facilitator Superfamily HVZ88_10515 PF01553 Acyltransferase HVZ88_10515 PF00501 AMP-binding enzyme HVZ88_10520 PF00356 Bacterial regulatory proteins, lacI family HVZ88_10525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HVZ88_10525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HVZ88_10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_10530 PF03466 LysR substrate binding domain HVZ88_10535 PF01177 Asp/Glu/Hydantoin racemase HVZ88_10540 PF00083 Sugar (and other) transporter HVZ88_10550 PF04962 KduI/IolB family HVZ88_10555 PF00108 Thiolase, N-terminal domain HVZ88_10555 PF02803 Thiolase, C-terminal domain HVZ88_10560 PF03222 Tryptophan/tyrosine permease family HVZ88_10565 PF00196 Bacterial regulatory proteins, luxR family HVZ88_10570 PF00486 Transcriptional regulatory protein, C terminal HVZ88_10595 PF07720 Tetratricopeptide repeat HVZ88_10600 PF00486 Transcriptional regulatory protein, C terminal HVZ88_10610 PF01464 Transglycosylase SLT domain HVZ88_10625 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) HVZ88_10630 PF01514 Secretory protein of YscJ/FliF family HVZ88_10640 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF HVZ88_10645 PF09480 Type III secretion system protein PrgH-EprH (PrgH) HVZ88_10660 PF01312 FlhB HrpN YscU SpaS Family HVZ88_10665 PF01312 FlhB HrpN YscU SpaS Family HVZ88_10670 PF01311 Bacterial export proteins, family 1 HVZ88_10675 PF01313 Bacterial export proteins, family 3 HVZ88_10680 PF00813 FliP family HVZ88_10685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVZ88_10700 PF01476 LysM domain HVZ88_10700 PF01551 Peptidase family M23 HVZ88_10705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HVZ88_10705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HVZ88_10710 PF00941 FAD binding domain in molybdopterin dehydrogenase HVZ88_10710 PF03450 CO dehydrogenase flavoprotein C-terminal domain HVZ88_10715 PF01799 [2Fe-2S] binding domain HVZ88_10715 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_10725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVZ88_10725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVZ88_10730 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_10735 PF01546 Peptidase family M20/M25/M40 HVZ88_10735 PF07687 Peptidase dimerisation domain HVZ88_10740 PF01979 Amidohydrolase family HVZ88_10745 PF00696 Amino acid kinase family HVZ88_10750 PF13478 XdhC Rossmann domain HVZ88_10750 PF02625 XdhC and CoxI family HVZ88_10760 PF12804 MobA-like NTP transferase domain HVZ88_10765 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVZ88_10765 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_10770 PF01979 Amidohydrolase family HVZ88_10775 PF00941 FAD binding domain in molybdopterin dehydrogenase HVZ88_10780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HVZ88_10780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HVZ88_10780 PF01799 [2Fe-2S] binding domain HVZ88_10785 PF00860 Permease family HVZ88_10790 PF01979 Amidohydrolase family HVZ88_10795 PF00860 Permease family HVZ88_10800 PF13247 4Fe-4S dicluster domain HVZ88_10805 PF00860 Permease family HVZ88_10820 PF00293 NUDIX domain HVZ88_10825 PF00152 tRNA synthetases class II (D, K and N) HVZ88_10825 PF01336 OB-fold nucleic acid binding domain HVZ88_10835 PF01368 DHH family HVZ88_10835 PF17768 RecJ OB domain HVZ88_10835 PF02272 DHHA1 domain HVZ88_10840 PF13098 Thioredoxin-like domain HVZ88_10840 PF10411 Disulfide bond isomerase protein N-terminus HVZ88_10845 PF02899 Phage integrase, N-terminal SAM-like domain HVZ88_10845 PF00589 Phage integrase family HVZ88_10850 PF00258 Flavodoxin HVZ88_10855 PF07254 Membrane-bound toxin component of toxin-antitoxin system HVZ88_10860 PF03937 Flavinator of succinate dehydrogenase HVZ88_10865 PF01571 Aminomethyltransferase folate-binding domain HVZ88_10870 PF03006 Haemolysin-III related HVZ88_10880 PF00232 Glycosyl hydrolase family 1 HVZ88_10885 PF02347 Glycine cleavage system P-protein HVZ88_10890 PF01597 Glycine cleavage H-protein HVZ88_10895 PF01571 Aminomethyltransferase folate-binding domain HVZ88_10895 PF08669 Glycine cleavage T-protein C-terminal barrel domain HVZ88_10905 PF01494 FAD binding domain HVZ88_10910 PF01494 FAD binding domain HVZ88_10915 PF00557 Metallopeptidase family M24 HVZ88_10915 PF05195 Aminopeptidase P, N-terminal domain HVZ88_10920 PF03695 Uncharacterised protein family (UPF0149) HVZ88_10925 PF05164 Cell division protein ZapA HVZ88_10935 PF01812 5-formyltetrahydrofolate cyclo-ligase family HVZ88_10945 PF01842 ACT domain HVZ88_10945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVZ88_10945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVZ88_10950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HVZ88_10955 PF03466 LysR substrate binding domain HVZ88_10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_10960 PF03466 LysR substrate binding domain HVZ88_10965 PF01642 Methylmalonyl-CoA mutase HVZ88_10965 PF02310 B12 binding domain HVZ88_10975 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_10980 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HVZ88_10980 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HVZ88_10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_10985 PF03466 LysR substrate binding domain HVZ88_10990 PF04402 Protein of unknown function (DUF541) HVZ88_10995 PF01810 LysE type translocator HVZ88_11000 PF00924 Mechanosensitive ion channel HVZ88_11000 PF05552 Conserved TM helix HVZ88_11005 PF01116 Fructose-bisphosphate aldolase class-II HVZ88_11010 PF00162 Phosphoglycerate kinase HVZ88_11015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HVZ88_11015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HVZ88_11025 PF05068 Mannitol repressor HVZ88_11030 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HVZ88_11035 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_11035 PF00107 Zinc-binding dehydrogenase HVZ88_11040 PF02378 Phosphotransferase system, EIIC HVZ88_11040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_11045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_11050 PF02779 Transketolase, pyrimidine binding domain HVZ88_11050 PF02780 Transketolase, C-terminal domain HVZ88_11050 PF00456 Transketolase, thiamine diphosphate binding domain HVZ88_11055 PF01435 Peptidase family M48 HVZ88_11060 PF00491 Arginase family HVZ88_11065 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HVZ88_11065 PF17810 Arginine decarboxylase helical bundle domain HVZ88_11065 PF17944 Arginine decarboxylase C-terminal helical extension HVZ88_11070 PF11036 Virulence promoting factor HVZ88_11075 PF17430 Uncharacterized YqgC-like HVZ88_11080 PF02772 S-adenosylmethionine synthetase, central domain HVZ88_11080 PF00438 S-adenosylmethionine synthetase, N-terminal domain HVZ88_11080 PF02773 S-adenosylmethionine synthetase, C-terminal domain HVZ88_11085 PF00083 Sugar (and other) transporter HVZ88_11090 PF17283 SprT-like zinc ribbon domain HVZ88_11090 PF10263 SprT-like family HVZ88_11095 PF04231 Endonuclease I HVZ88_11100 PF04452 RNA methyltransferase HVZ88_11105 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HVZ88_11105 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HVZ88_11110 PF02622 Uncharacterized ACR, COG1678 HVZ88_11115 PF03652 Holliday junction resolvase HVZ88_11120 PF00437 Type II/IV secretion system protein HVZ88_11125 PF01168 Alanine racemase, N-terminal domain HVZ88_11130 PF02325 YGGT family HVZ88_11135 PF02594 Uncharacterised ACR, YggU family COG1872 HVZ88_11140 PF01725 Ham1 family HVZ88_11145 PF06969 HemN C-terminal domain HVZ88_11145 PF04055 Radical SAM superfamily HVZ88_11150 PF06717 Protein of unknown function (DUF1202) HVZ88_11155 PF00710 Asparaginase, N-terminal HVZ88_11155 PF17763 Glutaminase/Asparaginase C-terminal domain HVZ88_11160 PF11101 Protein of unknown function (DUF2884) HVZ88_11165 PF04320 Protein with unknown function (DUF469) HVZ88_11170 PF02390 Putative methyltransferase HVZ88_11175 PF14815 NUDIX domain HVZ88_11175 PF00730 HhH-GPD superfamily base excision DNA repair protein HVZ88_11175 PF10576 Iron-sulfur binding domain of endonuclease III HVZ88_11175 PF00633 Helix-hairpin-helix motif HVZ88_11180 PF04362 Bacterial Fe(2+) trafficking HVZ88_11185 PF01464 Transglycosylase SLT domain HVZ88_11185 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HVZ88_11190 PF03825 Nucleoside H+ symporter HVZ88_11195 PF01276 Orn/Lys/Arg decarboxylase, major domain HVZ88_11195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVZ88_11195 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVZ88_11200 PF04474 Protein of unknown function (DUF554) HVZ88_11210 PF00589 Phage integrase family HVZ88_11210 PF13356 Arm DNA-binding domain HVZ88_11210 PF14659 Phage integrase, N-terminal SAM-like domain HVZ88_11215 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HVZ88_11225 PF12833 Helix-turn-helix domain HVZ88_11235 PF17158 Membrane-associated sensor, integral membrane domain HVZ88_11235 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_11250 PF01609 Transposase DDE domain HVZ88_11255 PF07690 Major Facilitator Superfamily HVZ88_11260 PF00884 Sulfatase HVZ88_11290 PF13505 Outer membrane protein beta-barrel domain HVZ88_11335 PF00816 H-NS histone family HVZ88_11355 PF05717 IS66 Orf2 like protein HVZ88_11360 PF00665 Integrase core domain HVZ88_11360 PF01527 Transposase HVZ88_11360 PF13276 HTH-like domain HVZ88_11375 PF00145 C-5 cytosine-specific DNA methylase HVZ88_11380 PF00145 C-5 cytosine-specific DNA methylase HVZ88_11495 PF17871 AAA lid domain HVZ88_11495 PF10431 C-terminal, D2-small domain, of ClpB protein HVZ88_11495 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_11495 PF07724 AAA domain (Cdc48 subfamily) HVZ88_11505 PF05736 OprF membrane domain HVZ88_11505 PF00691 OmpA family HVZ88_11585 PF01926 50S ribosome-binding GTPase HVZ88_11590 PF08220 DeoR-like helix-turn-helix domain HVZ88_11590 PF13280 WYL domain HVZ88_11600 PF06006 Bacterial protein of unknown function (DUF905) HVZ88_11605 PF06067 Domain of unknown function (DUF932) HVZ88_11610 PF03230 Antirestriction protein HVZ88_11615 PF04002 RadC-like JAB domain HVZ88_11620 PF06174 Protein of unknown function (DUF987) HVZ88_11625 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HVZ88_11630 PF06755 CbtA_toxin of type IV toxin-antitoxin system HVZ88_11650 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HVZ88_11660 PF00589 Phage integrase family HVZ88_11660 PF13356 Arm DNA-binding domain HVZ88_11670 PF08281 Sigma-70, region 4 HVZ88_11670 PF04542 Sigma-70 region 2 HVZ88_11675 PF04773 FecR protein HVZ88_11675 PF16220 Domain of unknown function (DUF4880) HVZ88_11680 PF00593 TonB dependent receptor HVZ88_11680 PF07660 Secretin and TonB N terminus short domain HVZ88_11680 PF07715 TonB-dependent Receptor Plug Domain HVZ88_11685 PF01497 Periplasmic binding protein HVZ88_11690 PF01032 FecCD transport family HVZ88_11695 PF01032 FecCD transport family HVZ88_11700 PF00005 ABC transporter HVZ88_11720 PF00440 Bacterial regulatory proteins, tetR family HVZ88_11720 PF16925 Tetracyclin repressor-like, C-terminal domain HVZ88_11725 PF10011 Predicted membrane protein (DUF2254) HVZ88_11730 PF02028 BCCT, betaine/carnitine/choline family transporter HVZ88_11760 PF03279 Bacterial lipid A biosynthesis acyltransferase HVZ88_11765 PF04393 Protein of unknown function (DUF535) HVZ88_11770 PF00534 Glycosyl transferases group 1 HVZ88_11770 PF13439 Glycosyltransferase Family 4 HVZ88_11775 PF01522 Polysaccharide deacetylase HVZ88_11790 PF13520 Amino acid permease HVZ88_11795 PF01276 Orn/Lys/Arg decarboxylase, major domain HVZ88_11795 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVZ88_11795 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVZ88_11800 PF13520 Amino acid permease HVZ88_11850 PF02652 L-lactate permease HVZ88_11855 PF01274 Malate synthase HVZ88_11860 PF03928 Haem-degrading HVZ88_11865 PF02754 Cysteine-rich domain HVZ88_11865 PF13183 4Fe-4S dicluster domain HVZ88_11870 PF01565 FAD binding domain HVZ88_11875 PF01565 FAD binding domain HVZ88_11875 PF02913 FAD linked oxidases, C-terminal domain HVZ88_11880 PF00392 Bacterial regulatory proteins, gntR family HVZ88_11880 PF07729 FCD domain HVZ88_11890 PF14535 AMP-binding enzyme C-terminal domain HVZ88_11890 PF00501 AMP-binding enzyme HVZ88_11900 PF00550 Phosphopantetheine attachment site HVZ88_11905 PF00155 Aminotransferase class I and II HVZ88_11915 PF03739 Lipopolysaccharide export system permease LptF/LptG HVZ88_11920 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HVZ88_11955 PF03738 Glutathionylspermidine synthase preATP-grasp HVZ88_11955 PF05257 CHAP domain HVZ88_11960 PF02798 Glutathione S-transferase, N-terminal domain HVZ88_11965 PF01455 HupF/HypC family HVZ88_11970 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HVZ88_11975 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE HVZ88_11980 PF01750 Hydrogenase maturation protease HVZ88_11985 PF00374 Nickel-dependent hydrogenase HVZ88_11990 PF03916 Polysulphide reductase, NrfD HVZ88_11995 PF13247 4Fe-4S dicluster domain HVZ88_12000 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HVZ88_12000 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HVZ88_12005 PF11115 Protein of unknown function (DUF2623) HVZ88_12015 PF00248 Aldo/keto reductase family HVZ88_12020 PF03350 Uncharacterized protein family, UPF0114 HVZ88_12030 PF02472 Biopolymer transport protein ExbD/TolR HVZ88_12035 PF01618 MotA/TolQ/ExbB proton channel family HVZ88_12040 PF01053 Cys/Met metabolism PLP-dependent enzyme HVZ88_12045 PF09335 SNARE associated Golgi protein HVZ88_12050 PF06719 AraC-type transcriptional regulator N-terminus HVZ88_12050 PF12833 Helix-turn-helix domain HVZ88_12055 PF00465 Iron-containing alcohol dehydrogenase HVZ88_12060 PF00248 Aldo/keto reductase family HVZ88_12065 PF12883 Protein of unknown function (DUF3828) HVZ88_12070 PF04728 Lipoprotein leucine-zipper HVZ88_12075 PF08497 Radical SAM N-terminal HVZ88_12075 PF11842 Domain of unknown function (DUF3362) HVZ88_12075 PF04055 Radical SAM superfamily HVZ88_12080 PF07731 Multicopper oxidase HVZ88_12080 PF07732 Multicopper oxidase HVZ88_12080 PF00394 Multicopper oxidase HVZ88_12085 PF01553 Acyltransferase HVZ88_12090 PF00521 DNA gyrase/topoisomerase IV, subunit A HVZ88_12090 PF03989 DNA gyrase C-terminal domain, beta-propeller HVZ88_12095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_12100 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HVZ88_12105 PF15723 Motility quorum-sensing regulator, toxin of MqsA HVZ88_12110 PF06445 GyrI-like small molecule binding domain HVZ88_12115 PF04076 Bacterial OB fold (BOF) protein HVZ88_12120 PF00486 Transcriptional regulatory protein, C terminal HVZ88_12120 PF00072 Response regulator receiver domain HVZ88_12125 PF08521 Two-component sensor kinase N-terminal HVZ88_12125 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_12125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_12130 PF10840 Protein of unknown function (DUF2645) HVZ88_12135 PF02525 Flavodoxin-like fold HVZ88_12140 PF03992 Antibiotic biosynthesis monooxygenase HVZ88_12145 PF00986 DNA gyrase B subunit, carboxyl terminus HVZ88_12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_12145 PF00204 DNA gyrase B HVZ88_12145 PF01751 Toprim domain HVZ88_12150 PF05728 Uncharacterised protein family (UPF0227) HVZ88_12155 PF00149 Calcineurin-like phosphoesterase HVZ88_12160 PF06853 Protein of unknown function (DUF1249) HVZ88_12165 PF00293 NUDIX domain HVZ88_12170 PF02321 Outer membrane efflux protein HVZ88_12175 PF06693 Protein of unknown function (DUF1190) HVZ88_12180 PF03738 Glutathionylspermidine synthase preATP-grasp HVZ88_12185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HVZ88_12190 PF02535 ZIP Zinc transporter HVZ88_12200 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HVZ88_12205 PF04380 Membrane fusogenic activity HVZ88_12210 PF00419 Fimbrial protein HVZ88_12215 PF00577 Outer membrane usher protein HVZ88_12215 PF13954 PapC N-terminal domain HVZ88_12215 PF13953 PapC C-terminal domain HVZ88_12220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_12220 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_12230 PF08971 Glycogen synthesis protein HVZ88_12235 PF07290 Protein of unknown function (DUF1449) HVZ88_12240 PF15975 Flotillin HVZ88_12240 PF01145 SPFH domain / Band 7 family HVZ88_12255 PF00294 pfkB family carbohydrate kinase HVZ88_12255 PF01467 Cytidylyltransferase-like HVZ88_12260 PF08335 GlnD PII-uridylyltransferase HVZ88_12260 PF03710 Glutamate-ammonia ligase adenylyltransferase HVZ88_12265 PF01928 CYTH domain HVZ88_12270 PF08239 Bacterial SH3 domain HVZ88_12275 PF01743 Poly A polymerase head domain HVZ88_12275 PF01966 HD domain HVZ88_12275 PF12627 Probable RNA and SrmB- binding site of polymerase A HVZ88_12280 PF02673 Bacitracin resistance protein BacA HVZ88_12285 PF02152 Dihydroneopterin aldolase HVZ88_12290 PF02660 Glycerol-3-phosphate acyltransferase HVZ88_12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_12295 PF03466 LysR substrate binding domain HVZ88_12300 PF05681 Fumarate hydratase (Fumerase) HVZ88_12305 PF05683 Fumarase C-terminus HVZ88_12310 PF00939 Sodium:sulfate symporter transmembrane region HVZ88_12315 PF00814 Glycoprotease family HVZ88_12320 PF01165 Ribosomal protein S21 HVZ88_12325 PF10410 DnaB-helicase binding domain of primase HVZ88_12325 PF08275 DNA primase catalytic core, N-terminal domain HVZ88_12325 PF01807 CHC2 zinc finger HVZ88_12325 PF08278 DNA primase DnaG DnaB-binding HVZ88_12330 PF04542 Sigma-70 region 2 HVZ88_12330 PF00140 Sigma-70 factor, region 1.2 HVZ88_12330 PF04545 Sigma-70, region 4 HVZ88_12330 PF04539 Sigma-70 region 3 HVZ88_12330 PF03979 Sigma-70 factor, region 1.1 HVZ88_12330 PF04546 Sigma-70, non-essential region HVZ88_12335 PF03167 Uracil DNA glycosylase superfamily HVZ88_12360 PF06755 CbtA_toxin of type IV toxin-antitoxin system HVZ88_12365 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HVZ88_12370 PF06174 Protein of unknown function (DUF987) HVZ88_12375 PF04002 RadC-like JAB domain HVZ88_12380 PF03230 Antirestriction protein HVZ88_12385 PF06067 Domain of unknown function (DUF932) HVZ88_12395 PF01695 IstB-like ATP binding protein HVZ88_12400 PF02796 Helix-turn-helix domain of resolvase HVZ88_12400 PF00665 Integrase core domain HVZ88_12430 PF13990 YjcZ-like protein HVZ88_12435 PF00350 Dynamin family HVZ88_12440 PF16168 Adhesin of bacterial autotransporter system, probable stalk HVZ88_12440 PF03797 Autotransporter beta-domain HVZ88_12440 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_12485 PF14461 Prokaryotic E2 family B HVZ88_12485 PF00899 ThiF family HVZ88_12535 PF05860 haemagglutination activity domain HVZ88_12535 PF04829 Pre-toxin domain with VENN motif HVZ88_12535 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_12535 PF13332 Hemagglutinin repeat HVZ88_12540 PF02794 RTX toxin acyltransferase family HVZ88_12545 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HVZ88_12545 PF08479 POTRA domain, ShlB-type HVZ88_12545 PF17287 POTRA domain HVZ88_12565 PF00271 Helicase conserved C-terminal domain HVZ88_12565 PF00176 SNF2 family N-terminal domain HVZ88_12565 PF12419 SNF2 Helicase protein HVZ88_12585 PF07638 ECF sigma factor HVZ88_12615 PF04954 Siderophore-interacting protein HVZ88_12615 PF08021 Siderophore-interacting FAD-binding domain HVZ88_12620 PF03551 Transcriptional regulator PadR-like family HVZ88_12625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVZ88_12625 PF08447 PAS fold HVZ88_12630 PF00202 Aminotransferase class-III HVZ88_12635 PF01588 Putative tRNA binding domain HVZ88_12640 PF00356 Bacterial regulatory proteins, lacI family HVZ88_12645 PF16353 Domain of unknown function(DUF4981) HVZ88_12645 PF02929 Beta galactosidase small chain HVZ88_12645 PF00703 Glycosyl hydrolases family 2 HVZ88_12645 PF02837 Glycosyl hydrolases family 2, sugar binding domain HVZ88_12645 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HVZ88_12650 PF04074 YhcH/YjgK/YiaL HVZ88_12655 PF13520 Amino acid permease HVZ88_12665 PF01204 Trehalase HVZ88_12670 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_12670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HVZ88_12675 PF01381 Helix-turn-helix HVZ88_12680 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HVZ88_12685 PF05175 Methyltransferase small domain HVZ88_12690 PF01863 Protein of unknown function DUF45 HVZ88_12695 PF02698 DUF218 domain HVZ88_12700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVZ88_12705 PF03741 Integral membrane protein TerC family HVZ88_12710 PF00375 Sodium:dicarboxylate symporter family HVZ88_12715 PF10688 Bacterial inner membrane protein HVZ88_12720 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HVZ88_12720 PF08666 SAF domain HVZ88_12725 PF02614 Glucuronate isomerase HVZ88_12730 PF07690 Major Facilitator Superfamily HVZ88_12735 PF07729 FCD domain HVZ88_12735 PF00392 Bacterial regulatory proteins, gntR family HVZ88_12740 PF09335 SNARE associated Golgi protein HVZ88_12745 PF13721 SecD export protein N-terminal TM region HVZ88_12750 PF06476 Protein of unknown function (DUF1090) HVZ88_12755 PF05957 Bacterial protein of unknown function (DUF883) HVZ88_12760 PF07332 Putative Actinobacterial Holin-X, holin superfamily III HVZ88_12765 PF13997 YqjK-like protein HVZ88_12770 PF07681 DoxX HVZ88_12775 PF13409 Glutathione S-transferase, N-terminal domain HVZ88_12795 PF05656 Protein of unknown function (DUF805) HVZ88_12800 PF03466 LysR substrate binding domain HVZ88_12800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_12805 PF17954 Quercetinase C-terminal cupin domain HVZ88_12805 PF02678 Pirin HVZ88_12815 PF03313 Serine dehydratase alpha chain HVZ88_12825 PF03313 Serine dehydratase alpha chain HVZ88_12825 PF03315 Serine dehydratase beta chain HVZ88_12830 PF01042 Endoribonuclease L-PSP HVZ88_12835 PF01228 Glycine radical HVZ88_12835 PF02901 Pyruvate formate lyase-like HVZ88_12840 PF00871 Acetokinase family HVZ88_12845 PF03222 Tryptophan/tyrosine permease family HVZ88_12850 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_12855 PF03466 LysR substrate binding domain HVZ88_12880 PF02595 Glycerate kinase family HVZ88_12885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVZ88_12885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HVZ88_12890 PF03328 HpcH/HpaI aldolase/citrate lyase family HVZ88_12895 PF07690 Major Facilitator Superfamily HVZ88_12900 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HVZ88_12900 PF08666 SAF domain HVZ88_12905 PF15937 prlF antitoxin for toxin YhaV_toxin HVZ88_12910 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system HVZ88_12915 PF00455 DeoR C terminal sensor domain HVZ88_12915 PF08220 DeoR-like helix-turn-helix domain HVZ88_12920 PF08013 Tagatose 6 phosphate kinase HVZ88_12925 PF03830 PTS system sorbose subfamily IIB component HVZ88_12930 PF03609 PTS system sorbose-specific iic component HVZ88_12935 PF03613 PTS system mannose/fructose/sorbose family IID component HVZ88_12940 PF03610 PTS system fructose IIA component HVZ88_12945 PF01979 Amidohydrolase family HVZ88_12950 PF01380 SIS domain HVZ88_12955 PF01116 Fructose-bisphosphate aldolase class-II HVZ88_12960 PF03830 PTS system sorbose subfamily IIB component HVZ88_12965 PF03609 PTS system sorbose-specific iic component HVZ88_12970 PF03613 PTS system mannose/fructose/sorbose family IID component HVZ88_12975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HVZ88_12980 PF00419 Fimbrial protein HVZ88_12985 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_12985 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_12990 PF13954 PapC N-terminal domain HVZ88_12990 PF00577 Outer membrane usher protein HVZ88_12990 PF13953 PapC C-terminal domain HVZ88_12995 PF00419 Fimbrial protein HVZ88_13000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HVZ88_13005 PF04348 LppC putative lipoprotein HVZ88_13010 PF02021 Uncharacterised protein family UPF0102 HVZ88_13015 PF13580 SIS domain HVZ88_13020 PF04972 BON domain HVZ88_13025 PF03773 Predicted permease HVZ88_13030 PF13460 NAD(P)H-binding HVZ88_13035 PF01965 DJ-1/PfpI family HVZ88_13045 PF01541 GIY-YIG catalytic domain HVZ88_13050 PF13508 Acetyltransferase (GNAT) domain HVZ88_13055 PF02036 SCP-2 sterol transfer family HVZ88_13060 PF01136 Peptidase family U32 HVZ88_13065 PF01136 Peptidase family U32 HVZ88_13070 PF00296 Luciferase-like monooxygenase HVZ88_13075 PF03222 Tryptophan/tyrosine permease family HVZ88_13080 PF00271 Helicase conserved C-terminal domain HVZ88_13080 PF12343 Cold shock protein DEAD box A HVZ88_13080 PF00270 DEAD/DEAH box helicase HVZ88_13080 PF03880 DbpA RNA binding domain HVZ88_13090 PF07719 Tetratricopeptide repeat HVZ88_13090 PF13181 Tetratricopeptide repeat HVZ88_13095 PF01138 3' exoribonuclease family, domain 1 HVZ88_13095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HVZ88_13095 PF00013 KH domain HVZ88_13095 PF00575 S1 RNA binding domain HVZ88_13095 PF03725 3' exoribonuclease family, domain 2 HVZ88_13100 PF00312 Ribosomal protein S15 HVZ88_13105 PF16198 tRNA pseudouridylate synthase B C-terminal domain HVZ88_13105 PF01509 TruB family pseudouridylate synthase (N terminal domain) HVZ88_13105 PF09157 Pseudouridine synthase II TruB, C-terminal HVZ88_13110 PF02033 Ribosome-binding factor A HVZ88_13115 PF00009 Elongation factor Tu GTP binding domain HVZ88_13115 PF11987 Translation-initiation factor 2 HVZ88_13115 PF08364 Bacterial translation initiation factor IF-2 associated region HVZ88_13115 PF04760 Translation initiation factor IF-2, N-terminal region HVZ88_13120 PF00575 S1 RNA binding domain HVZ88_13120 PF13184 NusA-like KH domain HVZ88_13120 PF08529 NusA N-terminal domain HVZ88_13125 PF02576 RimP N-terminal domain HVZ88_13125 PF17384 RimP C-terminal SH3 domain HVZ88_13135 PF00764 Arginosuccinate synthase HVZ88_13140 PF00884 Sulfatase HVZ88_13150 PF03840 Preprotein translocase SecG subunit HVZ88_13155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVZ88_13155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVZ88_13155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVZ88_13155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVZ88_13160 PF00809 Pterin binding enzyme HVZ88_13165 PF01434 Peptidase family M41 HVZ88_13165 PF17862 AAA+ lid domain HVZ88_13165 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_13165 PF06480 FtsH Extracellular HVZ88_13170 PF01728 FtsJ-like methyltransferase HVZ88_13175 PF01985 CRS1 / YhbY (CRM) domain HVZ88_13180 PF01272 Transcription elongation factor, GreA/GreB, C-term HVZ88_13180 PF03449 Transcription elongation factor, N-terminal HVZ88_13185 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HVZ88_13190 PF01926 50S ribosome-binding GTPase HVZ88_13190 PF01018 GTP1/OBG HVZ88_13195 PF00892 EamA-like transporter family HVZ88_13200 PF01016 Ribosomal L27 protein HVZ88_13205 PF00829 Ribosomal prokaryotic L21 protein HVZ88_13210 PF00348 Polyprenyl synthetase HVZ88_13215 PF13693 Winged helix-turn-helix DNA-binding HVZ88_13220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVZ88_13225 PF01722 BolA-like protein HVZ88_13230 PF13466 STAS domain HVZ88_13235 PF05494 MlaC protein HVZ88_13240 PF02470 MlaD protein HVZ88_13245 PF02405 Permease MlaE HVZ88_13250 PF00005 ABC transporter HVZ88_13255 PF01699 Sodium/calcium exchanger protein HVZ88_13260 PF01380 SIS domain HVZ88_13260 PF00571 CBS domain HVZ88_13270 PF06835 Lipopolysaccharide-assembly, LptC-related HVZ88_13275 PF03968 OstA-like protein HVZ88_13280 PF00005 ABC transporter HVZ88_13280 PF12399 Branched-chain amino acid ATP-binding cassette transporter HVZ88_13285 PF04552 Sigma-54, DNA binding domain HVZ88_13285 PF00309 Sigma-54 factor, Activator interacting domain (AID) HVZ88_13285 PF04963 Sigma-54 factor, core binding domain HVZ88_13290 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HVZ88_13295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_13300 PF03668 P-loop ATPase protein family HVZ88_13305 PF00381 PTS HPr component phosphorylation site HVZ88_13310 PF10707 PhoP regulatory network protein YrbL HVZ88_13315 PF00912 Transglycosylase HVZ88_13325 PF00989 PAS fold HVZ88_13325 PF01627 Hpt domain HVZ88_13325 PF00072 Response regulator receiver domain HVZ88_13325 PF18415 Histidine kinase receptor ArcB trans-membrane domain HVZ88_13325 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_13330 PF16199 Radical_SAM C-terminal domain HVZ88_13330 PF04055 Radical SAM superfamily HVZ88_13335 PF01493 GXGXG motif HVZ88_13335 PF04898 Glutamate synthase central domain HVZ88_13335 PF00310 Glutamine amidotransferases class-II HVZ88_13335 PF01645 Conserved region in glutamate synthase HVZ88_13340 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_13340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVZ88_13345 PF06551 Protein of unknown function (DUF1120) HVZ88_13350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_13375 PF06551 Protein of unknown function (DUF1120) HVZ88_13390 PF06250 YhcG PDDEXK nuclease domain HVZ88_13390 PF17761 DUF1016 N-terminal domain HVZ88_13395 PF04074 YhcH/YjgK/YiaL HVZ88_13400 PF00480 ROK family HVZ88_13405 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HVZ88_13410 PF07690 Major Facilitator Superfamily HVZ88_13415 PF00701 Dihydrodipicolinate synthetase family HVZ88_13420 PF00392 Bacterial regulatory proteins, gntR family HVZ88_13420 PF07729 FCD domain HVZ88_13425 PF03606 C4-dicarboxylate anaerobic carrier HVZ88_13430 PF04386 Stringent starvation protein B HVZ88_13435 PF02798 Glutathione S-transferase, N-terminal domain HVZ88_13435 PF00043 Glutathione S-transferase, C-terminal domain HVZ88_13440 PF00380 Ribosomal protein S9/S16 HVZ88_13445 PF00572 Ribosomal protein L13 HVZ88_13450 PF03969 AFG1-like ATPase HVZ88_13455 PF06295 Protein of unknown function (DUF1043) HVZ88_13460 PF13180 PDZ domain HVZ88_13460 PF00595 PDZ domain HVZ88_13465 PF13180 PDZ domain HVZ88_13470 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HVZ88_13470 PF00056 lactate/malate dehydrogenase, NAD binding domain HVZ88_13475 PF01316 Arginine repressor, DNA binding domain HVZ88_13475 PF02863 Arginine repressor, C-terminal domain HVZ88_13480 PF07338 Protein of unknown function (DUF1471) HVZ88_13485 PF01337 Barstar (barnase inhibitor) HVZ88_13490 PF04632 Fusaric acid resistance protein family HVZ88_13495 PF13533 Biotin-lipoyl like HVZ88_13500 PF07869 Protein of unknown function (DUF1656) HVZ88_13505 PF03466 LysR substrate binding domain HVZ88_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_13510 PF01523 Putative modulator of DNA gyrase HVZ88_13515 PF13116 Protein of unknown function HVZ88_13515 PF13502 AsmA-like C-terminal region HVZ88_13520 PF00575 S1 RNA binding domain HVZ88_13520 PF10150 Ribonuclease E/G family HVZ88_13525 PF02545 Maf-like protein HVZ88_13530 PF04093 rod shape-determining protein MreD HVZ88_13535 PF04085 rod shape-determining protein MreC HVZ88_13545 PF00563 EAL domain HVZ88_13545 PF17157 Gammaproteobacterial periplasmic sensor domain HVZ88_13545 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_13550 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_13550 PF00107 Zinc-binding dehydrogenase HVZ88_13555 PF00364 Biotin-requiring enzyme HVZ88_13560 PF02785 Biotin carboxylase C-terminal domain HVZ88_13560 PF00289 Biotin carboxylase, N-terminal domain HVZ88_13560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HVZ88_13565 PF06196 Protein of unknown function (DUF997) HVZ88_13570 PF00474 Sodium:solute symporter family HVZ88_13580 PF01207 Dihydrouridine synthase (Dus) HVZ88_13585 PF02954 Bacterial regulatory protein, Fis family HVZ88_13590 PF01555 DNA methylase HVZ88_13595 PF10831 Protein of unknown function (DUF2556) HVZ88_13600 PF00440 Bacterial regulatory proteins, tetR family HVZ88_13600 PF08361 MAATS-type transcriptional repressor, C-terminal region HVZ88_13605 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_13605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_13610 PF00873 AcrB/AcrD/AcrF family HVZ88_13620 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_13625 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_13630 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_13635 PF00005 ABC transporter HVZ88_13675 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_13680 PF07369 Protein of unknown function (DUF1488) HVZ88_13685 PF01488 Shikimate / quinate 5-dehydrogenase HVZ88_13685 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HVZ88_13685 PF08501 Shikimate dehydrogenase substrate binding domain HVZ88_13690 PF01300 Telomere recombination HVZ88_13695 PF01396 Topoisomerase DNA binding C4 zinc finger HVZ88_13700 PF04361 Protein of unknown function (DUF494) HVZ88_13705 PF17782 DprA winged helix domain HVZ88_13705 PF02481 DNA recombination-mediator protein A HVZ88_13710 PF01327 Polypeptide deformylase HVZ88_13715 PF02911 Formyl transferase, C-terminal domain HVZ88_13715 PF00551 Formyl transferase HVZ88_13720 PF01189 16S rRNA methyltransferase RsmB/F HVZ88_13720 PF01029 NusB family HVZ88_13725 PF02254 TrkA-N domain HVZ88_13725 PF02080 TrkA-C domain HVZ88_13730 PF01741 Large-conductance mechanosensitive channel, MscL HVZ88_13735 PF03889 Alternative ribosome-rescue factor A HVZ88_13740 PF13411 MerR HTH family regulatory protein HVZ88_13745 PF09350 Domain of unknown function (DUF1992) HVZ88_13750 PF01196 Ribosomal protein L17 HVZ88_13755 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HVZ88_13755 PF01000 RNA polymerase Rpb3/RpoA insert domain HVZ88_13755 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HVZ88_13760 PF00163 Ribosomal protein S4/S9 N-terminal domain HVZ88_13760 PF01479 S4 domain HVZ88_13765 PF00411 Ribosomal protein S11 HVZ88_13770 PF00416 Ribosomal protein S13/S18 HVZ88_13775 PF00444 Ribosomal protein L36 HVZ88_13780 PF00344 SecY translocase HVZ88_13785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HVZ88_13790 PF00327 Ribosomal protein L30p/L7e HVZ88_13795 PF00333 Ribosomal protein S5, N-terminal domain HVZ88_13795 PF03719 Ribosomal protein S5, C-terminal domain HVZ88_13800 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HVZ88_13805 PF00347 Ribosomal protein L6 HVZ88_13810 PF00410 Ribosomal protein S8 HVZ88_13815 PF00253 Ribosomal protein S14p/S29e HVZ88_13820 PF00281 Ribosomal protein L5 HVZ88_13820 PF00673 ribosomal L5P family C-terminus HVZ88_13825 PF00467 KOW motif HVZ88_13825 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HVZ88_13830 PF00238 Ribosomal protein L14p/L23e HVZ88_13835 PF00366 Ribosomal protein S17 HVZ88_13840 PF00831 Ribosomal L29 protein HVZ88_13845 PF00252 Ribosomal protein L16p/L10e HVZ88_13850 PF00189 Ribosomal protein S3, C-terminal domain HVZ88_13850 PF07650 KH domain HVZ88_13855 PF00237 Ribosomal protein L22p/L17e HVZ88_13860 PF00203 Ribosomal protein S19 HVZ88_13865 PF00181 Ribosomal Proteins L2, RNA binding domain HVZ88_13865 PF03947 Ribosomal Proteins L2, C-terminal domain HVZ88_13870 PF00276 Ribosomal protein L23 HVZ88_13875 PF00573 Ribosomal protein L4/L1 family HVZ88_13880 PF00297 Ribosomal protein L3 HVZ88_13885 PF00338 Ribosomal protein S10p/S20e HVZ88_13895 PF13401 AAA domain HVZ88_13895 PF01471 Putative peptidoglycan binding domain HVZ88_13900 PF11356 Type II secretion system protein C HVZ88_13905 PF03958 Bacterial type II/III secretion system short domain HVZ88_13905 PF00263 Bacterial type II and III secretion system protein HVZ88_13910 PF00437 Type II/IV secretion system protein HVZ88_13915 PF00482 Type II secretion system (T2SS), protein F HVZ88_13920 PF08334 Type II secretion system (T2SS), protein G HVZ88_13920 PF07963 Prokaryotic N-terminal methylation motif HVZ88_13925 PF07963 Prokaryotic N-terminal methylation motif HVZ88_13925 PF12019 Type II transport protein GspH HVZ88_13930 PF07963 Prokaryotic N-terminal methylation motif HVZ88_13930 PF02501 Type II secretion system (T2SS), protein I HVZ88_13935 PF11612 Type II secretion system (T2SS), protein J HVZ88_13935 PF07963 Prokaryotic N-terminal methylation motif HVZ88_13940 PF03934 Type II secretion system (T2SS), protein K HVZ88_13945 PF05134 Type II secretion system (T2SS), protein L HVZ88_13945 PF12693 GspL periplasmic domain HVZ88_13950 PF04612 Type II secretion system (T2SS), protein M HVZ88_13955 PF01478 Type IV leader peptidase family HVZ88_13960 PF00210 Ferritin-like domain HVZ88_13965 PF04324 BFD-like [2Fe-2S] binding domain HVZ88_13970 PF02839 Carbohydrate binding domain HVZ88_13975 PF00009 Elongation factor Tu GTP binding domain HVZ88_13975 PF03144 Elongation factor Tu domain 2 HVZ88_13975 PF03143 Elongation factor Tu C-terminal domain HVZ88_13980 PF00009 Elongation factor Tu GTP binding domain HVZ88_13980 PF03144 Elongation factor Tu domain 2 HVZ88_13980 PF14492 Elongation Factor G, domain II HVZ88_13980 PF03764 Elongation factor G, domain IV HVZ88_13980 PF00679 Elongation factor G C-terminus HVZ88_13985 PF00177 Ribosomal protein S7p/S5e HVZ88_13990 PF00164 Ribosomal protein S12/S23 HVZ88_13995 PF04077 DsrH like protein HVZ88_14000 PF02635 DsrE/DsrF-like family HVZ88_14005 PF02635 DsrE/DsrF-like family HVZ88_14010 PF13309 HTH domain HVZ88_14010 PF08348 YheO-like PAS domain HVZ88_14015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVZ88_14015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HVZ88_14020 PF04102 SlyX HVZ88_14025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVZ88_14030 PF09526 Probable metal-binding protein (DUF2387) HVZ88_14035 PF00999 Sodium/hydrogen exchanger family HVZ88_14035 PF02254 TrkA-N domain HVZ88_14040 PF02525 Flavodoxin-like fold HVZ88_14045 PF12848 ABC transporter HVZ88_14045 PF00005 ABC transporter HVZ88_14050 PF00561 alpha/beta hydrolase fold HVZ88_14055 PF06794 Uncharacterised protein family (UPF0270) HVZ88_14060 PF00485 Phosphoribulokinase / Uridine kinase family HVZ88_14065 PF02566 OsmC-like protein HVZ88_14070 PF00027 Cyclic nucleotide-binding domain HVZ88_14070 PF13545 Crp-like helix-turn-helix domain HVZ88_14075 PF12805 FUSC-like inner membrane protein yccS HVZ88_14080 PF00202 Aminotransferase class-III HVZ88_14085 PF00117 Glutamine amidotransferase class-I HVZ88_14090 PF02661 Fic/DOC family HVZ88_14095 PF10832 Protein of unknown function (DUF2559) HVZ88_14100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HVZ88_14105 PF07690 Major Facilitator Superfamily HVZ88_14110 PF04324 BFD-like [2Fe-2S] binding domain HVZ88_14110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HVZ88_14110 PF18267 Rubredoxin NAD+ reductase C-terminal domain HVZ88_14110 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_14110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HVZ88_14115 PF13806 Rieske-like [2Fe-2S] domain HVZ88_14120 PF01226 Formate/nitrite transporter HVZ88_14125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HVZ88_14125 PF10414 Sirohaem synthase dimerisation region HVZ88_14125 PF14824 Sirohaem biosynthesis protein central HVZ88_14130 PF13978 Protein of unknown function (DUF4223) HVZ88_14135 PF13520 Amino acid permease HVZ88_14140 PF01380 SIS domain HVZ88_14145 PF01261 Xylose isomerase-like TIM barrel HVZ88_14150 PF00294 pfkB family carbohydrate kinase HVZ88_14155 PF07702 UTRA domain HVZ88_14155 PF00392 Bacterial regulatory proteins, gntR family HVZ88_14160 PF00155 Aminotransferase class I and II HVZ88_14165 PF10797 Protein of unknown function HVZ88_14170 PF10941 Protein of unknown function DUF2620 HVZ88_14175 PF02126 Phosphotriesterase family HVZ88_14180 PF01676 Metalloenzyme superfamily HVZ88_14195 PF14502 Helix-turn-helix domain HVZ88_14195 PF14503 YhfZ C-terminal domain HVZ88_14200 PF00579 tRNA synthetases class I (W and Y) HVZ88_14205 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_14210 PF00834 Ribulose-phosphate 3 epimerase family HVZ88_14215 PF02086 D12 class N6 adenine-specific DNA methyltransferase HVZ88_14220 PF05036 Sporulation related domain HVZ88_14225 PF01761 3-dehydroquinate synthase HVZ88_14230 PF01202 Shikimate kinase HVZ88_14240 PF10748 DNA utilization proteins HofP HVZ88_14250 PF05137 Fimbrial assembly protein (PilN) HVZ88_14260 PF17092 Penicillin-binding protein OB-like domain HVZ88_14260 PF00912 Transglycosylase HVZ88_14260 PF00905 Penicillin binding protein transpeptidase domain HVZ88_14265 PF00293 NUDIX domain HVZ88_14270 PF07095 Intracellular growth attenuator protein IgaA HVZ88_14275 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_14280 PF01479 S4 domain HVZ88_14285 PF01430 Hsp33 protein HVZ88_14290 PF13687 Domain of unknown function (DUF4153) HVZ88_14295 PF01293 Phosphoenolpyruvate carboxykinase HVZ88_14300 PF00672 HAMP domain HVZ88_14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_14300 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_14305 PF00486 Transcriptional regulatory protein, C terminal HVZ88_14305 PF00072 Response regulator receiver domain HVZ88_14310 PF01272 Transcription elongation factor, GreA/GreB, C-term HVZ88_14310 PF03449 Transcription elongation factor, N-terminal HVZ88_14315 PF00575 S1 RNA binding domain HVZ88_14315 PF17674 HHH domain HVZ88_14315 PF16921 Tex protein YqgF-like domain HVZ88_14315 PF09371 Tex-like protein N-terminal domain HVZ88_14320 PF04023 FeoA domain HVZ88_14325 PF07664 Ferrous iron transport protein B C terminus HVZ88_14325 PF02421 Ferrous iron transport protein B HVZ88_14325 PF17910 FeoB cytosolic helical domain HVZ88_14325 PF07670 Nucleoside recognition HVZ88_14330 PF09012 FeoC like transcriptional regulator HVZ88_14335 PF04754 Putative transposase, YhgA-like HVZ88_14340 PF00561 alpha/beta hydrolase fold HVZ88_14345 PF00156 Phosphoribosyl transferase domain HVZ88_14350 PF01106 NifU-like domain HVZ88_14350 PF01521 Iron-sulphur cluster biosynthesis HVZ88_14355 PF02447 GntP family permease HVZ88_14360 PF02446 4-alpha-glucanotransferase HVZ88_14365 PF00343 Carbohydrate phosphorylase HVZ88_14370 PF00196 Bacterial regulatory proteins, luxR family HVZ88_14370 PF17874 MalT-like TPR region HVZ88_14375 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain HVZ88_14375 PF01137 RNA 3'-terminal phosphate cyclase HVZ88_14380 PF01139 tRNA-splicing ligase RtcB HVZ88_14385 PF06956 Regulator of RNA terminal phosphate cyclase HVZ88_14385 PF00158 Sigma-54 interaction domain HVZ88_14390 PF08220 DeoR-like helix-turn-helix domain HVZ88_14390 PF00455 DeoR C terminal sensor domain HVZ88_14395 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HVZ88_14395 PF01694 Rhomboid family HVZ88_14400 PF00581 Rhodanese-like domain HVZ88_14405 PF01266 FAD dependent oxidoreductase HVZ88_14405 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HVZ88_14415 PF00343 Carbohydrate phosphorylase HVZ88_14420 PF08323 Starch synthase catalytic domain HVZ88_14420 PF00534 Glycosyl transferases group 1 HVZ88_14425 PF00483 Nucleotidyl transferase HVZ88_14430 PF18390 Glycogen debranching enzyme C-terminal domain HVZ88_14430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HVZ88_14430 PF00128 Alpha amylase, catalytic domain HVZ88_14435 PF02806 Alpha amylase, C-terminal all-beta domain HVZ88_14435 PF00128 Alpha amylase, catalytic domain HVZ88_14435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HVZ88_14440 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVZ88_14440 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVZ88_14445 PF01914 MarC family integral membrane protein HVZ88_14450 PF02447 GntP family permease HVZ88_14455 PF01202 Shikimate kinase HVZ88_14460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVZ88_14460 PF00356 Bacterial regulatory proteins, lacI family HVZ88_14465 PF02678 Pirin HVZ88_14465 PF17954 Quercetinase C-terminal cupin domain HVZ88_14470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVZ88_14470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HVZ88_14475 PF00583 Acetyltransferase (GNAT) family HVZ88_14480 PF05638 Type VI secretion system effector, Hcp HVZ88_14495 PF15567 Immunity protein 35 HVZ88_14505 PF10956 Protein of unknown function (DUF2756) HVZ88_14510 PF03009 Glycerophosphoryl diester phosphodiesterase family HVZ88_14515 PF17912 MalK OB fold domain HVZ88_14515 PF00005 ABC transporter HVZ88_14520 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_14525 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_14530 PF13416 Bacterial extracellular solute-binding protein HVZ88_14535 PF00005 ABC transporter HVZ88_14540 PF12399 Branched-chain amino acid ATP-binding cassette transporter HVZ88_14540 PF00005 ABC transporter HVZ88_14545 PF02653 Branched-chain amino acid transport system / permease component HVZ88_14545 PF11862 Domain of unknown function (DUF3382) HVZ88_14550 PF02653 Branched-chain amino acid transport system / permease component HVZ88_14555 PF13458 Periplasmic binding protein HVZ88_14560 PF12568 Acetyltransferase (GNAT) domain, PanZ HVZ88_14565 PF13458 Periplasmic binding protein HVZ88_14570 PF04545 Sigma-70, region 4 HVZ88_14570 PF04542 Sigma-70 region 2 HVZ88_14575 PF02687 FtsX-like permease family HVZ88_14575 PF18075 FtsX extracellular domain HVZ88_14580 PF00005 ABC transporter HVZ88_14585 PF00448 SRP54-type protein, GTPase domain HVZ88_14585 PF02881 SRP54-type protein, helical bundle domain HVZ88_14595 PF06611 Protein of unknown function (DUF1145) HVZ88_14600 PF10694 Protein of unknown function (DUF2500) HVZ88_14605 PF07947 YhhN family HVZ88_14610 PF00403 Heavy-metal-associated domain HVZ88_14615 PF01206 Sulfurtransferase TusA HVZ88_14620 PF02592 Putative vitamin uptake transporter HVZ88_14625 PF08786 DcrB HVZ88_14630 PF07690 Major Facilitator Superfamily HVZ88_14635 PF01594 AI-2E family transporter HVZ88_14640 PF01648 4'-phosphopantetheinyl transferase superfamily HVZ88_14645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_14650 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_14655 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_14660 PF00005 ABC transporter HVZ88_14665 PF00005 ABC transporter HVZ88_14670 PF08753 NikR C terminal nickel binding domain HVZ88_14670 PF01402 Ribbon-helix-helix protein, copG family HVZ88_14675 PF05593 RHS Repeat HVZ88_14675 PF03527 RHS protein HVZ88_14675 PF14220 Domain of unknown function (DUF4329) HVZ88_14685 PF03130 PBS lyase HEAT-like repeat HVZ88_14690 PF01609 Transposase DDE domain HVZ88_14690 PF13808 DDE_Tnp_1-associated HVZ88_14700 PF00005 ABC transporter HVZ88_14705 PF13533 Biotin-lipoyl like HVZ88_14710 PF13258 Domain of unknown function (DUF4049) HVZ88_14715 PF13258 Domain of unknown function (DUF4049) HVZ88_14720 PF10951 Protein of unknown function (DUF2776) HVZ88_14730 PF01384 Phosphate transporter family HVZ88_14735 PF10625 Universal stress protein B (UspB) HVZ88_14740 PF00582 Universal stress protein family HVZ88_14745 PF00854 POT family HVZ88_14750 PF04445 Putative SAM-dependent methyltransferase HVZ88_14755 PF01432 Peptidase family M3 HVZ88_14760 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HVZ88_14765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVZ88_14765 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_14775 PF01022 Bacterial regulatory protein, arsR family HVZ88_14780 PF02040 Arsenical pump membrane protein HVZ88_14785 PF03960 ArsC family HVZ88_14795 PF03843 Outer membrane lipoprotein Slp family HVZ88_14800 PF00196 Bacterial regulatory proteins, luxR family HVZ88_14805 PF02308 MgtC family HVZ88_14810 PF06411 HdeA/HdeB family HVZ88_14815 PF06411 HdeA/HdeB family HVZ88_14820 PF03729 Short repeat of unknown function (DUF308) HVZ88_14825 PF00196 Bacterial regulatory proteins, luxR family HVZ88_14835 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_14835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_14840 PF00873 AcrB/AcrD/AcrF family HVZ88_14845 PF12833 Helix-turn-helix domain HVZ88_14850 PF12833 Helix-turn-helix domain HVZ88_14855 PF00282 Pyridoxal-dependent decarboxylase conserved domain HVZ88_14860 PF00034 Cytochrome c HVZ88_14860 PF03150 Di-haem cytochrome c peroxidase HVZ88_14860 PF14376 Haem-binding domain HVZ88_14865 PF01204 Trehalase HVZ88_14870 PF00196 Bacterial regulatory proteins, luxR family HVZ88_14875 PF03466 LysR substrate binding domain HVZ88_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_14880 PF03631 Virulence factor BrkB HVZ88_14885 PF07690 Major Facilitator Superfamily HVZ88_14885 PF00083 Sugar (and other) transporter HVZ88_14890 PF05170 AsmA family HVZ88_14895 PF00563 EAL domain HVZ88_14900 PF00294 pfkB family carbohydrate kinase HVZ88_14905 PF00675 Insulinase (Peptidase family M16) HVZ88_14905 PF05193 Peptidase M16 inactive domain HVZ88_14910 PF00375 Sodium:dicarboxylate symporter family HVZ88_14915 PF00563 EAL domain HVZ88_14915 PF17154 Gammaproteobacterial periplasmic sensor domain HVZ88_14915 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_14915 PF00672 HAMP domain HVZ88_14920 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HVZ88_14930 PF03170 Bacterial cellulose synthase subunit HVZ88_14935 PF03552 Cellulose synthase HVZ88_14935 PF00535 Glycosyl transferase family 2 HVZ88_14935 PF07238 PilZ domain HVZ88_14945 PF11120 Cellulose biosynthesis protein BcsF HVZ88_14950 PF11658 Cellulose biosynthesis protein BcsG HVZ88_14955 PF13940 Toxin Ldr, type I toxin-antitoxin system HVZ88_14960 PF03222 Tryptophan/tyrosine permease family HVZ88_14965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_14965 PF00005 ABC transporter HVZ88_14970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_14970 PF00005 ABC transporter HVZ88_14975 PF12911 N-terminal TM domain of oligopeptide transport permease C HVZ88_14975 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_14980 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_14985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_14995 PF00884 Sulfatase HVZ88_14995 PF08019 Phosphoethanolamine transferase EptA/EptB HVZ88_15000 PF07690 Major Facilitator Superfamily HVZ88_15005 PF03797 Autotransporter beta-domain HVZ88_15010 PF03352 Methyladenine glycosylase HVZ88_15015 PF00583 Acetyltransferase (GNAT) family HVZ88_15020 PF00384 Molybdopterin oxidoreductase HVZ88_15020 PF18364 Molybdopterin oxidoreductase N-terminal domain HVZ88_15020 PF01568 Molydopterin dinucleotide binding domain HVZ88_15025 PF13488 Glycine zipper HVZ88_15025 PF00691 OmpA family HVZ88_15030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVZ88_15030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVZ88_15035 PF11254 Protein of unknown function (DUF3053) HVZ88_15040 PF01381 Helix-turn-helix HVZ88_15045 PF00313 'Cold-shock' DNA-binding domain HVZ88_15050 PF01848 Hok/gef family HVZ88_15060 PF05746 DALR anticodon binding domain HVZ88_15060 PF02092 Glycyl-tRNA synthetase beta subunit HVZ88_15065 PF02091 Glycyl-tRNA synthetase alpha subunit HVZ88_15070 PF13983 YsaB-like lipoprotein HVZ88_15075 PF01757 Acyltransferase family HVZ88_15080 PF05360 yiaA/B two helix domain HVZ88_15085 PF05360 yiaA/B two helix domain HVZ88_15090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_15090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_15100 PF13407 Periplasmic binding protein domain HVZ88_15105 PF00005 ABC transporter HVZ88_15110 PF02653 Branched-chain amino acid transport system / permease component HVZ88_15115 PF12833 Helix-turn-helix domain HVZ88_15120 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HVZ88_15125 PF00128 Alpha amylase, catalytic domain HVZ88_15130 PF00155 Aminotransferase class I and II HVZ88_15135 PF13247 4Fe-4S dicluster domain HVZ88_15140 PF09339 IclR helix-turn-helix domain HVZ88_15140 PF01614 Bacterial transcriptional regulator HVZ88_15145 PF02615 Malate/L-lactate dehydrogenase HVZ88_15150 PF04074 YhcH/YjgK/YiaL HVZ88_15155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HVZ88_15160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HVZ88_15165 PF03480 Bacterial extracellular solute-binding protein, family 7 HVZ88_15170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_15170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_15175 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HVZ88_15180 PF01261 Xylose isomerase-like TIM barrel HVZ88_15185 PF00596 Class II Aldolase and Adducin N-terminal domain HVZ88_15200 PF07944 Beta-L-arabinofuranosidase, GH127 HVZ88_15205 PF06629 MltA-interacting protein MipA HVZ88_15210 PF03466 LysR substrate binding domain HVZ88_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_15215 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_15215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_15220 PF11742 Protein of unknown function (DUF3302) HVZ88_15230 PF00171 Aldehyde dehydrogenase family HVZ88_15235 PF00465 Iron-containing alcohol dehydrogenase HVZ88_15240 PF00009 Elongation factor Tu GTP binding domain HVZ88_15240 PF09106 Elongation factor SelB, winged helix HVZ88_15240 PF09107 Elongation factor SelB, winged helix HVZ88_15240 PF03144 Elongation factor Tu domain 2 HVZ88_15245 PF12390 Selenocysteine synthase N terminal HVZ88_15245 PF03841 L-seryl-tRNA selenium transferase HVZ88_15250 PF13417 Glutathione S-transferase, N-terminal domain HVZ88_15250 PF00043 Glutathione S-transferase, C-terminal domain HVZ88_15255 PF15606 Bacterial toxin 34 HVZ88_15255 PF03527 RHS protein HVZ88_15255 PF05593 RHS Repeat HVZ88_15260 PF03130 PBS lyase HEAT-like repeat HVZ88_15270 PF03527 RHS protein HVZ88_15280 PF15596 Immunity protein 57 HVZ88_15285 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_15285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_15290 PF11742 Protein of unknown function (DUF3302) HVZ88_15295 PF02378 Phosphotransferase system, EIIC HVZ88_15295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_15295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_15300 PF08125 Mannitol dehydrogenase C-terminal domain HVZ88_15300 PF01232 Mannitol dehydrogenase Rossmann domain HVZ88_15305 PF05068 Mannitol repressor HVZ88_15315 PF10928 Protein of unknown function (DUF2810) HVZ88_15320 PF11622 Protein of unknown function (DUF3251) HVZ88_15325 PF03895 YadA-like membrane anchor domain HVZ88_15325 PF05658 Head domain of trimeric autotransporter adhesin HVZ88_15325 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_15325 PF05662 Coiled stalk of trimeric autotransporter adhesin HVZ88_15330 PF02652 L-lactate permease HVZ88_15335 PF07729 FCD domain HVZ88_15335 PF00392 Bacterial regulatory proteins, gntR family HVZ88_15340 PF01070 FMN-dependent dehydrogenase HVZ88_15345 PF00588 SpoU rRNA Methylase family HVZ88_15350 PF06426 Serine acetyltransferase, N-terminal HVZ88_15350 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_15355 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HVZ88_15355 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HVZ88_15360 PF02556 Preprotein translocase subunit SecB HVZ88_15365 PF00462 Glutaredoxin HVZ88_15370 PF00581 Rhodanese-like domain HVZ88_15375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HVZ88_15375 PF01676 Metalloenzyme superfamily HVZ88_15380 PF01551 Peptidase family M23 HVZ88_15385 PF04748 Divergent polysaccharide deacetylase HVZ88_15390 PF00535 Glycosyl transferase family 2 HVZ88_15395 PF00107 Zinc-binding dehydrogenase HVZ88_15395 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_15400 PF00155 Aminotransferase class I and II HVZ88_15405 PF09612 Bacterial protein of unknown function (HtrL_YibB) HVZ88_15410 PF01370 NAD dependent epimerase/dehydratase family HVZ88_15415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HVZ88_15420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HVZ88_15425 PF04932 O-Antigen ligase HVZ88_15430 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HVZ88_15440 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) HVZ88_15445 PF01501 Glycosyl transferase family 8 HVZ88_15445 PF08437 Glycosyl transferase family 8 C-terminal HVZ88_15450 PF01501 Glycosyl transferase family 8 HVZ88_15450 PF08437 Glycosyl transferase family 8 C-terminal HVZ88_15455 PF00534 Glycosyl transferases group 1 HVZ88_15455 PF13439 Glycosyltransferase Family 4 HVZ88_15470 PF00534 Glycosyl transferases group 1 HVZ88_15470 PF13439 Glycosyltransferase Family 4 HVZ88_15475 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HVZ88_15480 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HVZ88_15485 PF01467 Cytidylyltransferase-like HVZ88_15490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HVZ88_15490 PF06827 Zinc finger found in FPG and IleRS HVZ88_15490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HVZ88_15495 PF00471 Ribosomal protein L33 HVZ88_15500 PF00830 Ribosomal L28 family HVZ88_15510 PF02441 Flavoprotein HVZ88_15510 PF04127 DNA / pantothenate metabolism flavoprotein HVZ88_15515 PF00692 dUTPase HVZ88_15520 PF00440 Bacterial regulatory proteins, tetR family HVZ88_15525 PF00156 Phosphoribosyl transferase domain HVZ88_15530 PF01138 3' exoribonuclease family, domain 1 HVZ88_15530 PF03725 3' exoribonuclease family, domain 2 HVZ88_15535 PF03755 YicC-like family, N-terminal region HVZ88_15535 PF08340 Domain of unknown function (DUF1732) HVZ88_15545 PF03458 UPF0126 domain HVZ88_15550 PF01653 NAD-dependent DNA ligase adenylation domain HVZ88_15550 PF03120 NAD-dependent DNA ligase OB-fold domain HVZ88_15555 PF00625 Guanylate kinase HVZ88_15560 PF01192 RNA polymerase Rpb6 HVZ88_15565 PF04607 Region found in RelA / SpoT proteins HVZ88_15565 PF13291 ACT domain HVZ88_15565 PF02824 TGS domain HVZ88_15570 PF00588 SpoU rRNA Methylase family HVZ88_15570 PF12105 SpoU, rRNA methylase, C-terminal HVZ88_15575 PF00270 DEAD/DEAH box helicase HVZ88_15575 PF00271 Helicase conserved C-terminal domain HVZ88_15575 PF17191 RecG wedge domain HVZ88_15580 PF03616 Sodium/glutamate symporter HVZ88_15585 PF00860 Permease family HVZ88_15590 PF05170 AsmA family HVZ88_15595 PF13802 Galactose mutarotase-like HVZ88_15595 PF01055 Glycosyl hydrolases family 31 HVZ88_15610 PF13356 Arm DNA-binding domain HVZ88_15610 PF14659 Phage integrase, N-terminal SAM-like domain HVZ88_15610 PF00589 Phage integrase family HVZ88_15620 PF00884 Sulfatase HVZ88_15645 PF13505 Outer membrane protein beta-barrel domain HVZ88_15655 PF00589 Phage integrase family HVZ88_15655 PF13356 Arm DNA-binding domain HVZ88_15665 PF02463 RecF/RecN/SMC N terminal domain HVZ88_15670 PF01420 Type I restriction modification DNA specificity domain HVZ88_15675 PF02384 N-6 DNA Methylase HVZ88_15675 PF12161 HsdM N-terminal domain HVZ88_15680 PF04851 Type III restriction enzyme, res subunit HVZ88_15680 PF00271 Helicase conserved C-terminal domain HVZ88_15680 PF08463 EcoEI R protein C-terminal HVZ88_15680 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HVZ88_15695 PF06114 IrrE N-terminal-like domain HVZ88_15810 PF07724 AAA domain (Cdc48 subfamily) HVZ88_15810 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_15810 PF10431 C-terminal, D2-small domain, of ClpB protein HVZ88_15810 PF17871 AAA lid domain HVZ88_15820 PF00691 OmpA family HVZ88_15820 PF05736 OprF membrane domain HVZ88_15865 PF03797 Autotransporter beta-domain HVZ88_15875 PF00665 Integrase core domain HVZ88_15885 PF13333 Integrase core domain HVZ88_15885 PF13276 HTH-like domain HVZ88_15885 PF00665 Integrase core domain HVZ88_15895 PF00665 Integrase core domain HVZ88_15895 PF13276 HTH-like domain HVZ88_15895 PF13333 Integrase core domain HVZ88_15910 PF06977 SdiA-regulated HVZ88_15920 PF13005 zinc-finger binding domain of transposase IS66 HVZ88_15920 PF13007 Transposase C of IS166 homeodomain HVZ88_15920 PF03050 Transposase IS66 family HVZ88_15920 PF13817 IS66 C-terminal element HVZ88_15925 PF05717 IS66 Orf2 like protein HVZ88_15955 PF00419 Fimbrial protein HVZ88_15960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HVZ88_15960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVZ88_15965 PF01609 Transposase DDE domain HVZ88_15975 PF00419 Fimbrial protein HVZ88_15980 PF00419 Fimbrial protein HVZ88_15985 PF14855 Pilus-assembly fibrillin subunit, chaperone HVZ88_15990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_15990 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_15995 PF00577 Outer membrane usher protein HVZ88_15995 PF13954 PapC N-terminal domain HVZ88_15995 PF13953 PapC C-terminal domain HVZ88_16005 PF00419 Fimbrial protein HVZ88_16010 PF03333 Adhesin biosynthesis transcription regulatory protein HVZ88_16085 PF01926 50S ribosome-binding GTPase HVZ88_16095 PF06006 Bacterial protein of unknown function (DUF905) HVZ88_16100 PF06067 Domain of unknown function (DUF932) HVZ88_16105 PF03230 Antirestriction protein HVZ88_16110 PF04002 RadC-like JAB domain HVZ88_16115 PF06174 Protein of unknown function (DUF987) HVZ88_16120 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HVZ88_16125 PF06755 CbtA_toxin of type IV toxin-antitoxin system HVZ88_16150 PF07690 Major Facilitator Superfamily HVZ88_16155 PF00892 EamA-like transporter family HVZ88_16160 PF03180 NLPA lipoprotein HVZ88_16170 PF07690 Major Facilitator Superfamily HVZ88_16175 PF06711 Protein of unknown function (DUF1198) HVZ88_16180 PF00860 Permease family HVZ88_16185 PF01979 Amidohydrolase family HVZ88_16185 PF13382 Adenine deaminase C-terminal domain HVZ88_16190 PF07690 Major Facilitator Superfamily HVZ88_16195 PF07690 Major Facilitator Superfamily HVZ88_16200 PF07730 Histidine kinase HVZ88_16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_16200 PF05231 MASE1 HVZ88_16205 PF00196 Bacterial regulatory proteins, luxR family HVZ88_16205 PF00072 Response regulator receiver domain HVZ88_16210 PF01842 ACT domain HVZ88_16215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVZ88_16215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_16215 PF00205 Thiamine pyrophosphate enzyme, central domain HVZ88_16220 PF08049 IlvB leader peptide HVZ88_16225 PF13939 Toxin TisB, type I toxin-antitoxin system HVZ88_16230 PF07690 Major Facilitator Superfamily HVZ88_16240 PF02656 Domain of unknown function (DUF202) HVZ88_16245 PF02656 Domain of unknown function (DUF202) HVZ88_16255 PF16347 Domain of unknown function (DUF4976) HVZ88_16255 PF00884 Sulfatase HVZ88_16260 PF00474 Sodium:solute symporter family HVZ88_16265 PF12833 Helix-turn-helix domain HVZ88_16265 PF02311 AraC-like ligand binding domain HVZ88_16275 PF00367 phosphotransferase system, EIIB HVZ88_16275 PF02378 Phosphotransferase system, EIIC HVZ88_16280 PF00392 Bacterial regulatory proteins, gntR family HVZ88_16280 PF07702 UTRA domain HVZ88_16285 PF02080 TrkA-C domain HVZ88_16285 PF06826 Predicted Permease Membrane Region HVZ88_16290 PF00011 Hsp20/alpha crystallin family HVZ88_16295 PF00011 Hsp20/alpha crystallin family HVZ88_16300 PF07119 Protein of unknown function (DUF1375) HVZ88_16305 PF12566 Protein of unknown function (DUF3748) HVZ88_16305 PF07676 WD40-like Beta Propeller Repeat HVZ88_16310 PF01494 FAD binding domain HVZ88_16315 PF07690 Major Facilitator Superfamily HVZ88_16320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HVZ88_16320 PF13378 Enolase C-terminal domain-like HVZ88_16325 PF01081 KDPG and KHG aldolase HVZ88_16330 PF05035 2-keto-3-deoxy-galactonokinase HVZ88_16335 PF07729 FCD domain HVZ88_16335 PF00392 Bacterial regulatory proteins, gntR family HVZ88_16350 PF06078 Bacterial protein of unknown function (DUF937) HVZ88_16355 PF00204 DNA gyrase B HVZ88_16355 PF01751 Toprim domain HVZ88_16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_16355 PF18053 DNA gyrase B subunit insert domain HVZ88_16355 PF00986 DNA gyrase B subunit, carboxyl terminus HVZ88_16360 PF02463 RecF/RecN/SMC N terminal domain HVZ88_16365 PF02767 DNA polymerase III beta subunit, central domain HVZ88_16365 PF00712 DNA polymerase III beta subunit, N-terminal domain HVZ88_16365 PF02768 DNA polymerase III beta subunit, C-terminal domain HVZ88_16370 PF11638 DnaA N-terminal domain HVZ88_16370 PF00308 Bacterial dnaA protein HVZ88_16370 PF08299 Bacterial dnaA protein helix-turn-helix HVZ88_16380 PF00468 Ribosomal protein L34 HVZ88_16385 PF00825 Ribonuclease P HVZ88_16390 PF01809 Putative membrane protein insertion efficiency factor HVZ88_16395 PF02096 60Kd inner membrane protein HVZ88_16395 PF14849 YidC periplasmic domain HVZ88_16400 PF10396 GTP-binding protein TrmE N-terminus HVZ88_16400 PF12631 MnmE helical domain HVZ88_16400 PF01926 50S ribosome-binding GTPase HVZ88_16405 PF08053 Tryptophanase operon leader peptide HVZ88_16410 PF01212 Beta-eliminating lyase HVZ88_16415 PF03222 Tryptophan/tyrosine permease family HVZ88_16420 PF07690 Major Facilitator Superfamily HVZ88_16425 PF03466 LysR substrate binding domain HVZ88_16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_16435 PF03358 NADPH-dependent FMN reductase HVZ88_16440 PF00860 Permease family HVZ88_16445 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_16455 PF03691 Uncharacterised protein family (UPF0167) HVZ88_16460 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HVZ88_16465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HVZ88_16465 PF00756 Putative esterase HVZ88_16470 PF11471 Maltoporin periplasmic N-terminal extension HVZ88_16470 PF02264 LamB porin HVZ88_16475 PF00232 Glycosyl hydrolase family 1 HVZ88_16480 PF00367 phosphotransferase system, EIIB HVZ88_16480 PF02378 Phosphotransferase system, EIIC HVZ88_16480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HVZ88_16485 PF03123 CAT RNA binding domain HVZ88_16485 PF00874 PRD domain HVZ88_16490 PF01895 PhoU domain HVZ88_16495 PF00005 ABC transporter HVZ88_16500 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_16505 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_16510 PF12849 PBP superfamily domain HVZ88_16515 PF01380 SIS domain HVZ88_16520 PF12804 MobA-like NTP transferase domain HVZ88_16520 PF14602 Hexapeptide repeat of succinyl-transferase HVZ88_16520 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_16525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HVZ88_16525 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HVZ88_16530 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVZ88_16530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVZ88_16535 PF00231 ATP synthase HVZ88_16540 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVZ88_16540 PF00306 ATP synthase alpha/beta chain, C terminal domain HVZ88_16540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVZ88_16545 PF00213 ATP synthase delta (OSCP) subunit HVZ88_16550 PF00430 ATP synthase B/B' CF(0) HVZ88_16555 PF00137 ATP synthase subunit C HVZ88_16560 PF00119 ATP synthase A chain HVZ88_16565 PF03899 ATP synthase I chain HVZ88_16570 PF02527 rRNA small subunit methyltransferase G HVZ88_16575 PF01134 Glucose inhibited division protein A HVZ88_16575 PF13932 GidA associated domain HVZ88_16580 PF00258 Flavodoxin HVZ88_16585 PF01037 Lrp/AsnC ligand binding domain HVZ88_16590 PF03590 Aspartate-ammonia ligase HVZ88_16595 PF05762 VWA domain containing CoxE-like protein HVZ88_16600 PF17868 AAA lid domain HVZ88_16600 PF12592 Protein of unknown function (DUF3763) HVZ88_16600 PF07728 AAA domain (dynein-related subfamily) HVZ88_16605 PF02705 K+ potassium transporter HVZ88_16610 PF05025 RbsD / FucU transport protein family HVZ88_16615 PF00005 ABC transporter HVZ88_16620 PF02653 Branched-chain amino acid transport system / permease component HVZ88_16625 PF13407 Periplasmic binding protein domain HVZ88_16630 PF00294 pfkB family carbohydrate kinase HVZ88_16635 PF00356 Bacterial regulatory proteins, lacI family HVZ88_16640 PF07690 Major Facilitator Superfamily HVZ88_16645 PF07729 FCD domain HVZ88_16645 PF00392 Bacterial regulatory proteins, gntR family HVZ88_16680 PF03466 LysR substrate binding domain HVZ88_16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_16685 PF04219 Protein of unknown function, DUF HVZ88_16690 PF13335 Magnesium chelatase, subunit ChlI C-terminal HVZ88_16690 PF01078 Magnesium chelatase, subunit ChlI HVZ88_16695 PF08046 IlvGEDA operon leader peptide HVZ88_16705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVZ88_16705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_16705 PF00205 Thiamine pyrophosphate enzyme, central domain HVZ88_16715 PF01063 Amino-transferase class IV HVZ88_16720 PF00920 Dehydratase family HVZ88_16725 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_16725 PF00585 C-terminal regulatory domain of Threonine dehydratase HVZ88_16730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_16730 PF03466 LysR substrate binding domain HVZ88_16735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HVZ88_16735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HVZ88_16745 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HVZ88_16750 PF13361 UvrD-like helicase C-terminal domain HVZ88_16750 PF00580 UvrD/REP helicase N-terminal domain HVZ88_16755 PF02541 Ppx/GppA phosphatase family HVZ88_16760 PF00270 DEAD/DEAH box helicase HVZ88_16760 PF00271 Helicase conserved C-terminal domain HVZ88_16765 PF00085 Thioredoxin HVZ88_16775 PF07497 Rho termination factor, RNA-binding domain HVZ88_16775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVZ88_16775 PF07498 Rho termination factor, N-terminal domain HVZ88_16780 PF00953 Glycosyl transferase family 4 HVZ88_16785 PF02706 Chain length determinant protein HVZ88_16790 PF02350 UDP-N-acetylglucosamine 2-epimerase HVZ88_16795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HVZ88_16795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HVZ88_16795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HVZ88_16800 PF16363 GDP-mannose 4,6 dehydratase HVZ88_16805 PF00483 Nucleotidyl transferase HVZ88_16815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HVZ88_16820 PF01943 Polysaccharide biosynthesis protein HVZ88_16825 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 HVZ88_16830 PF06899 WzyE protein, O-antigen assembly polymerase HVZ88_16835 PF03808 Glycosyl transferase WecB/TagA/CpsF family HVZ88_16840 PF00324 Amino acid permease HVZ88_16865 PF13186 Iron-sulfur cluster-binding domain HVZ88_16865 PF04055 Radical SAM superfamily HVZ88_16870 PF00884 Sulfatase HVZ88_16875 PF07719 Tetratricopeptide repeat HVZ88_16875 PF07219 HemY protein N-terminus HVZ88_16880 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HVZ88_16885 PF02602 Uroporphyrinogen-III synthase HemD HVZ88_16890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HVZ88_16890 PF03900 Porphobilinogen deaminase, C-terminal domain HVZ88_16895 PF12633 Adenylate cyclase NT domain HVZ88_16895 PF01295 Adenylate cyclase, class-I HVZ88_16900 PF01491 Frataxin-like domain HVZ88_16905 PF13627 Prokaryotic lipoprotein-attachment site HVZ88_16910 PF01678 Diaminopimelate epimerase HVZ88_16915 PF04340 Protein of unknown function, DUF484 HVZ88_16920 PF00589 Phage integrase family HVZ88_16920 PF02899 Phage integrase, N-terminal SAM-like domain HVZ88_16925 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_16930 PF00580 UvrD/REP helicase N-terminal domain HVZ88_16930 PF13361 UvrD-like helicase C-terminal domain HVZ88_16935 PF09992 Phosphodiester glycosidase HVZ88_16940 PF01544 CorA-like Mg2+ transporter protein HVZ88_16945 PF10947 Protein of unknown function (DUF2628) HVZ88_16955 PF00892 EamA-like transporter family HVZ88_16960 PF03061 Thioesterase superfamily HVZ88_16965 PF02253 Phospholipase A1 HVZ88_16970 PF00270 DEAD/DEAH box helicase HVZ88_16970 PF00570 HRDC domain HVZ88_16970 PF00271 Helicase conserved C-terminal domain HVZ88_16970 PF16124 RecQ zinc-binding HVZ88_16970 PF09382 RQC domain HVZ88_16975 PF01810 LysE type translocator HVZ88_16980 PF01810 LysE type translocator HVZ88_16985 PF12146 Serine aminopeptidase, S33 HVZ88_16995 PF00892 EamA-like transporter family HVZ88_17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_17000 PF03466 LysR substrate binding domain HVZ88_17005 PF08267 Cobalamin-independent synthase, N-terminal domain HVZ88_17005 PF01717 Cobalamin-independent synthase, Catalytic domain HVZ88_17010 PF01738 Dienelactone hydrolase family HVZ88_17015 PF01048 Phosphorylase superfamily HVZ88_17020 PF02646 RmuC family HVZ88_17025 PF01209 ubiE/COQ5 methyltransferase family HVZ88_17030 PF02036 SCP-2 sterol transfer family HVZ88_17035 PF03109 ABC1 family HVZ88_17040 PF02416 mttA/Hcf106 family HVZ88_17050 PF00902 Sec-independent protein translocase protein (TatC) HVZ88_17055 PF01026 TatD related DNase HVZ88_17060 PF02357 Transcription termination factor nusG HVZ88_17065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HVZ88_17070 PF00970 Oxidoreductase FAD-binding domain HVZ88_17070 PF00175 Oxidoreductase NAD-binding domain HVZ88_17075 PF02803 Thiolase, C-terminal domain HVZ88_17075 PF00108 Thiolase, N-terminal domain HVZ88_17080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HVZ88_17080 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_17080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HVZ88_17085 PF00557 Metallopeptidase family M24 HVZ88_17090 PF09186 Domain of unknown function (DUF1949) HVZ88_17090 PF01205 Uncharacterized protein family UPF0029 HVZ88_17095 PF02386 Cation transport protein HVZ88_17100 PF12724 Flavodoxin domain HVZ88_17130 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HVZ88_17135 PF12804 MobA-like NTP transferase domain HVZ88_17140 PF06288 Protein of unknown function (DUF1040) HVZ88_17145 PF01636 Phosphotransferase enzyme family HVZ88_17150 PF01323 DSBA-like thioredoxin domain HVZ88_17155 PF06097 Bacterial protein of unknown function (DUF945) HVZ88_17160 PF01553 Acyltransferase HVZ88_17165 PF01612 3'-5' exonuclease HVZ88_17165 PF00476 DNA polymerase family A HVZ88_17165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HVZ88_17165 PF01367 5'-3' exonuclease, C-terminal SAM fold HVZ88_17170 PF01926 50S ribosome-binding GTPase HVZ88_17175 PF04220 Der GTPase activator (YihI) HVZ88_17180 PF06969 HemN C-terminal domain HVZ88_17180 PF04055 Radical SAM superfamily HVZ88_17190 PF00158 Sigma-54 interaction domain HVZ88_17190 PF02954 Bacterial regulatory protein, Fis family HVZ88_17190 PF00072 Response regulator receiver domain HVZ88_17195 PF00989 PAS fold HVZ88_17195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_17195 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_17200 PF00120 Glutamine synthetase, catalytic domain HVZ88_17200 PF03951 Glutamine synthetase, beta-Grasp domain HVZ88_17210 PF07702 UTRA domain HVZ88_17210 PF00392 Bacterial regulatory proteins, gntR family HVZ88_17215 PF01261 Xylose isomerase-like TIM barrel HVZ88_17220 PF07690 Major Facilitator Superfamily HVZ88_17225 PF06178 Oligogalacturonate-specific porin protein (KdgM) HVZ88_17240 PF01055 Glycosyl hydrolases family 31 HVZ88_17250 PF01263 Aldose 1-epimerase HVZ88_17260 PF01791 DeoC/LacD family aldolase HVZ88_17265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HVZ88_17265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVZ88_17270 PF00294 pfkB family carbohydrate kinase HVZ88_17275 PF00455 DeoR C terminal sensor domain HVZ88_17275 PF08220 DeoR-like helix-turn-helix domain HVZ88_17280 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_17285 PF03631 Virulence factor BrkB HVZ88_17290 PF02580 D-Tyr-tRNA(Tyr) deacylase HVZ88_17295 PF09500 Putative thioesterase (yiiD_Cterm) HVZ88_17295 PF00583 Acetyltransferase (GNAT) family HVZ88_17300 PF01402 Ribbon-helix-helix protein, copG family HVZ88_17310 PF04216 Protein involved in formate dehydrogenase formation HVZ88_17315 PF01292 Prokaryotic cytochrome b561 HVZ88_17320 PF09163 Formate dehydrogenase N, transmembrane HVZ88_17320 PF13247 4Fe-4S dicluster domain HVZ88_17330 PF02634 FdhD/NarQ family HVZ88_17335 PF12889 Protein of unknown function (DUF3829) HVZ88_17340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_17340 PF08279 HTH domain HVZ88_17345 PF05343 M42 glutamyl aminopeptidase HVZ88_17350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_17350 PF02378 Phosphotransferase system, EIIC HVZ88_17355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_17360 PF05336 L-rhamnose mutarotase HVZ88_17365 PF00596 Class II Aldolase and Adducin N-terminal domain HVZ88_17370 PF06134 L-rhamnose isomerase (RhaA) HVZ88_17375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_17375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_17380 PF12833 Helix-turn-helix domain HVZ88_17380 PF02311 AraC-like ligand binding domain HVZ88_17385 PF02311 AraC-like ligand binding domain HVZ88_17385 PF12833 Helix-turn-helix domain HVZ88_17390 PF06379 L-rhamnose-proton symport protein (RhaT) HVZ88_17395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HVZ88_17395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HVZ88_17400 PF03812 2-keto-3-deoxygluconate permease HVZ88_17405 PF03475 3-alpha domain HVZ88_17405 PF03473 MOSC domain HVZ88_17410 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_17410 PF00672 HAMP domain HVZ88_17410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_17410 PF16527 Two-component sensor protein CpxA, periplasmic domain HVZ88_17415 PF00486 Transcriptional regulatory protein, C terminal HVZ88_17415 PF00072 Response regulator receiver domain HVZ88_17420 PF07813 LTXXQ motif family protein HVZ88_17425 PF01545 Cation efflux family HVZ88_17425 PF16916 Dimerisation domain of Zinc Transporter HVZ88_17430 PF00365 Phosphofructokinase HVZ88_17440 PF02611 CDP-diacylglycerol pyrophosphatase HVZ88_17445 PF00121 Triosephosphate isomerase HVZ88_17450 PF07305 Protein of unknown function (DUF1454) HVZ88_17455 PF05656 Protein of unknown function (DUF805) HVZ88_17460 PF04175 Protein of unknown function (DUF406) HVZ88_17465 PF00582 Universal stress protein family HVZ88_17470 PF00175 Oxidoreductase NAD-binding domain HVZ88_17470 PF00970 Oxidoreductase FAD-binding domain HVZ88_17475 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HVZ88_17480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVZ88_17480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_17485 PF00230 Major intrinsic protein HVZ88_17490 PF06005 Cell division protein ZapB HVZ88_17495 PF03737 Aldolase/RraA HVZ88_17500 PF01040 UbiA prenyltransferase family HVZ88_17505 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_17505 PF10431 C-terminal, D2-small domain, of ClpB protein HVZ88_17505 PF07724 AAA domain (Cdc48 subfamily) HVZ88_17510 PF00227 Proteasome subunit HVZ88_17515 PF05036 Sporulation related domain HVZ88_17520 PF00356 Bacterial regulatory proteins, lacI family HVZ88_17525 PF00270 DEAD/DEAH box helicase HVZ88_17525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HVZ88_17525 PF18074 Primosomal protein N C-terminal domain HVZ88_17525 PF17764 3′ DNA-binding domain (3′BD) HVZ88_17525 PF00271 Helicase conserved C-terminal domain HVZ88_17530 PF01197 Ribosomal protein L31 HVZ88_17535 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HVZ88_17540 PF01340 Met Apo-repressor, MetJ HVZ88_17545 PF01053 Cys/Met metabolism PLP-dependent enzyme HVZ88_17550 PF03447 Homoserine dehydrogenase, NAD binding domain HVZ88_17550 PF00742 Homoserine dehydrogenase HVZ88_17550 PF00696 Amino acid kinase family HVZ88_17555 PF02219 Methylenetetrahydrofolate reductase HVZ88_17560 PF00141 Peroxidase HVZ88_17565 PF00892 EamA-like transporter family HVZ88_17570 PF06940 Domain of unknown function (DUF1287) HVZ88_17575 PF00465 Iron-containing alcohol dehydrogenase HVZ88_17580 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVZ88_17585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_17585 PF00381 PTS HPr component phosphorylation site HVZ88_17585 PF02896 PEP-utilising enzyme, TIM barrel domain HVZ88_17585 PF00391 PEP-utilising enzyme, mobile domain HVZ88_17585 PF05524 PEP-utilising enzyme, N-terminal HVZ88_17595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_17600 PF01228 Glycine radical HVZ88_17600 PF02901 Pyruvate formate lyase-like HVZ88_17605 PF04055 Radical SAM superfamily HVZ88_17610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_17615 PF12833 Helix-turn-helix domain HVZ88_17620 PF00884 Sulfatase HVZ88_17625 PF00311 Phosphoenolpyruvate carboxylase HVZ88_17630 PF01546 Peptidase family M20/M25/M40 HVZ88_17630 PF07687 Peptidase dimerisation domain HVZ88_17635 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVZ88_17635 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVZ88_17640 PF00696 Amino acid kinase family HVZ88_17645 PF14698 Argininosuccinate lyase C-terminal HVZ88_17645 PF00206 Lyase HVZ88_17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_17650 PF03466 LysR substrate binding domain HVZ88_17655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVZ88_17655 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_17660 PF00440 Bacterial regulatory proteins, tetR family HVZ88_17665 PF07226 Protein of unknown function (DUF1422) HVZ88_17670 PF05958 tRNA (Uracil-5-)-methyltransferase HVZ88_17675 PF07715 TonB-dependent Receptor Plug Domain HVZ88_17675 PF00593 TonB dependent receptor HVZ88_17680 PF01177 Asp/Glu/Hydantoin racemase HVZ88_17705 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HVZ88_17705 PF01565 FAD binding domain HVZ88_17710 PF03099 Biotin/lipoate A/B protein ligase family HVZ88_17710 PF08279 HTH domain HVZ88_17710 PF02237 Biotin protein ligase C terminal domain HVZ88_17715 PF00485 Phosphoribulokinase / Uridine kinase family HVZ88_17740 PF00009 Elongation factor Tu GTP binding domain HVZ88_17740 PF03144 Elongation factor Tu domain 2 HVZ88_17740 PF03143 Elongation factor Tu C-terminal domain HVZ88_17745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HVZ88_17750 PF02357 Transcription termination factor nusG HVZ88_17750 PF00467 KOW motif HVZ88_17755 PF03946 Ribosomal protein L11, N-terminal domain HVZ88_17755 PF00298 Ribosomal protein L11, RNA binding domain HVZ88_17760 PF00687 Ribosomal protein L1p/L10e family HVZ88_17765 PF00466 Ribosomal protein L10 HVZ88_17770 PF16320 Ribosomal protein L7/L12 dimerisation domain HVZ88_17770 PF00542 Ribosomal protein L7/L12 C-terminal domain HVZ88_17775 PF04565 RNA polymerase Rpb2, domain 3 HVZ88_17775 PF04561 RNA polymerase Rpb2, domain 2 HVZ88_17775 PF00562 RNA polymerase Rpb2, domain 6 HVZ88_17775 PF04563 RNA polymerase beta subunit HVZ88_17775 PF10385 RNA polymerase beta subunit external 1 domain HVZ88_17775 PF04560 RNA polymerase Rpb2, domain 7 HVZ88_17780 PF04998 RNA polymerase Rpb1, domain 5 HVZ88_17780 PF05000 RNA polymerase Rpb1, domain 4 HVZ88_17780 PF04983 RNA polymerase Rpb1, domain 3 HVZ88_17780 PF00623 RNA polymerase Rpb1, domain 2 HVZ88_17780 PF04997 RNA polymerase Rpb1, domain 1 HVZ88_17790 PF06968 Biotin and Thiamin Synthesis associated domain HVZ88_17790 PF04055 Radical SAM superfamily HVZ88_17795 PF05690 Thiazole biosynthesis protein ThiG HVZ88_17800 PF02597 ThiS family HVZ88_17805 PF00899 ThiF family HVZ88_17810 PF02581 Thiamine monophosphate synthase HVZ88_17815 PF13667 ThiC-associated domain HVZ88_17815 PF01964 Radical SAM ThiC family HVZ88_17820 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HVZ88_17825 PF00293 NUDIX domain HVZ88_17825 PF09297 NADH pyrophosphatase zinc ribbon domain HVZ88_17830 PF01208 Uroporphyrinogen decarboxylase (URO-D) HVZ88_17835 PF04493 Endonuclease V HVZ88_17840 PF04222 Protein of unknown function (DUF416) HVZ88_17845 PF00216 Bacterial DNA-binding protein HVZ88_17850 PF07356 Protein of unknown function (DUF1481) HVZ88_17855 PF13801 Heavy-metal resistance HVZ88_17860 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_17860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_17865 PF00158 Sigma-54 interaction domain HVZ88_17865 PF02954 Bacterial regulatory protein, Fis family HVZ88_17865 PF00072 Response regulator receiver domain HVZ88_17870 PF02843 Phosphoribosylglycinamide synthetase, C domain HVZ88_17870 PF02844 Phosphoribosylglycinamide synthetase, N domain HVZ88_17870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HVZ88_17875 PF02142 MGS-like domain HVZ88_17875 PF01808 AICARFT/IMPCHase bienzyme HVZ88_17905 PF13673 Acetyltransferase (GNAT) domain HVZ88_17910 PF04204 Homoserine O-succinyltransferase HVZ88_17915 PF01274 Malate synthase HVZ88_17920 PF00463 Isocitrate lyase family HVZ88_17925 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HVZ88_17935 PF09339 IclR helix-turn-helix domain HVZ88_17935 PF01614 Bacterial transcriptional regulator HVZ88_17940 PF02574 Homocysteine S-methyltransferase HVZ88_17940 PF02310 B12 binding domain HVZ88_17940 PF00809 Pterin binding enzyme HVZ88_17940 PF02607 B12 binding domain HVZ88_17940 PF02965 Vitamin B12 dependent methionine synthase, activation domain HVZ88_17945 PF02690 Na+/Pi-cotransporter HVZ88_17950 PF03575 Peptidase family S51 HVZ88_17955 PF00849 RNA pseudouridylate synthase HVZ88_17955 PF01479 S4 domain HVZ88_17960 PF11656 YjbD family (DUF3811) HVZ88_17965 PF01842 ACT domain HVZ88_17965 PF00696 Amino acid kinase family HVZ88_17970 PF00342 Phosphoglucose isomerase HVZ88_17975 PF11106 Exopolysaccharide production protein YjbE HVZ88_17980 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HVZ88_17985 PF06251 Capsule biosynthesis GfcC HVZ88_17990 PF06082 Exopolysaccharide biosynthesis protein YbjH HVZ88_17995 PF17089 Uncharacterised protein family HVZ88_18000 PF06146 Phosphate-starvation-inducible E HVZ88_18005 PF00083 Sugar (and other) transporter HVZ88_18010 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_18015 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_18015 PF14785 Maltose transport system permease protein MalF P2 domain HVZ88_18020 PF01547 Bacterial extracellular solute-binding protein HVZ88_18025 PF17912 MalK OB fold domain HVZ88_18025 PF00005 ABC transporter HVZ88_18030 PF02264 LamB porin HVZ88_18035 PF07148 Maltose operon periplasmic protein precursor (MalM) HVZ88_18040 PF13599 Pentapeptide repeats (9 copies) HVZ88_18040 PF13981 SopA-like central domain HVZ88_18045 PF04345 Chorismate lyase HVZ88_18050 PF01040 UbiA prenyltransferase family HVZ88_18055 PF01553 Acyltransferase HVZ88_18060 PF01219 Prokaryotic diacylglycerol kinase HVZ88_18065 PF01726 LexA DNA binding domain HVZ88_18065 PF00717 Peptidase S24-like HVZ88_18070 PF01554 MatE HVZ88_18075 PF05532 CsbD-like HVZ88_18080 PF01475 Ferric uptake regulator family HVZ88_18090 PF01207 Dihydrouridine synthase (Dus) HVZ88_18095 PF09583 Phage shock protein G (Phageshock_PspG) HVZ88_18100 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_18100 PF00107 Zinc-binding dehydrogenase HVZ88_18105 PF00772 DnaB-like helicase N terminal domain HVZ88_18105 PF03796 DnaB-like helicase C terminal domain HVZ88_18110 PF00842 Alanine racemase, C-terminal domain HVZ88_18110 PF01168 Alanine racemase, N-terminal domain HVZ88_18115 PF00155 Aminotransferase class I and II HVZ88_18125 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HVZ88_18130 PF01894 Uncharacterised protein family UPF0047 HVZ88_18135 PF04237 YjbR HVZ88_18140 PF17755 UvrA DNA-binding domain HVZ88_18140 PF00005 ABC transporter HVZ88_18140 PF17760 UvrA interaction domain HVZ88_18145 PF00436 Single-strand binding protein family HVZ88_18150 PF15940 Family of unknown function HVZ88_18155 PF12792 CSS motif domain associated with EAL HVZ88_18155 PF00563 EAL domain HVZ88_18160 PF12833 Helix-turn-helix domain HVZ88_18165 PF09278 MerR, DNA binding HVZ88_18165 PF00376 MerR family regulatory protein HVZ88_18170 PF00860 Permease family HVZ88_18175 PF00999 Sodium/hydrogen exchanger family HVZ88_18180 PF00805 Pentapeptide repeats (8 copies) HVZ88_18185 PF00474 Sodium:solute symporter family HVZ88_18190 PF04341 Protein of unknown function, DUF485 HVZ88_18195 PF13193 AMP-binding enzyme C-terminal domain HVZ88_18195 PF00501 AMP-binding enzyme HVZ88_18195 PF16177 Acetyl-coenzyme A synthetase N-terminus HVZ88_18200 PF02335 Cytochrome c552 HVZ88_18205 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HVZ88_18205 PF13435 Cytochrome c554 and c-prime HVZ88_18210 PF13247 4Fe-4S dicluster domain HVZ88_18210 PF00037 4Fe-4S binding domain HVZ88_18215 PF03916 Polysulphide reductase, NrfD HVZ88_18220 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HVZ88_18220 PF01578 Cytochrome C assembly protein HVZ88_18225 PF03918 Cytochrome C biogenesis protein HVZ88_18235 PF00375 Sodium:dicarboxylate symporter family HVZ88_18240 PF08238 Sel1 repeat HVZ88_18255 PF04632 Fusaric acid resistance protein family HVZ88_18260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_18260 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_18265 PF17090 Uncharacterised protein family HVZ88_18270 PF14863 Alkyl sulfatase dimerisation HVZ88_18270 PF14864 Alkyl sulfatase C-terminal HVZ88_18270 PF00753 Metallo-beta-lactamase superfamily HVZ88_18275 PF00480 ROK family HVZ88_18280 PF00834 Ribulose-phosphate 3 epimerase family HVZ88_18285 PF02653 Branched-chain amino acid transport system / permease component HVZ88_18290 PF00005 ABC transporter HVZ88_18295 PF13407 Periplasmic binding protein domain HVZ88_18300 PF01380 SIS domain HVZ88_18300 PF01418 Helix-turn-helix domain, rpiR family HVZ88_18305 PF02502 Ribose/Galactose Isomerase HVZ88_18315 PF12706 Beta-lactamase superfamily domain HVZ88_18320 PF00583 Acetyltransferase (GNAT) family HVZ88_18330 PF07969 Amidohydrolase family HVZ88_18335 PF00005 ABC transporter HVZ88_18340 PF00005 ABC transporter HVZ88_18345 PF06007 Phosphonate metabolism protein PhnJ HVZ88_18350 PF05861 Bacterial phosphonate metabolism protein (PhnI) HVZ88_18355 PF05845 Bacterial phosphonate metabolism protein (PhnH) HVZ88_18360 PF06754 Phosphonate metabolism protein PhnG HVZ88_18365 PF07702 UTRA domain HVZ88_18365 PF00392 Bacterial regulatory proteins, gntR family HVZ88_18370 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_18380 PF00005 ABC transporter HVZ88_18385 PF06983 3-demethylubiquinone-9 3-methyltransferase HVZ88_18390 PF03831 PhnA domain HVZ88_18390 PF08274 PhnA Zinc-Ribbon HVZ88_18395 PF00350 Dynamin family HVZ88_18400 PF13990 YjcZ-like protein HVZ88_18405 PF00083 Sugar (and other) transporter HVZ88_18405 PF08946 Osmosensory transporter coiled coil HVZ88_18415 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_18415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_18420 PF00072 Response regulator receiver domain HVZ88_18420 PF00486 Transcriptional regulatory protein, C terminal HVZ88_18425 PF08019 Phosphoethanolamine transferase EptA/EptB HVZ88_18425 PF00884 Sulfatase HVZ88_18430 PF13520 Amino acid permease HVZ88_18435 PF12833 Helix-turn-helix domain HVZ88_18440 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVZ88_18440 PF01276 Orn/Lys/Arg decarboxylase, major domain HVZ88_18440 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVZ88_18445 PF12833 Helix-turn-helix domain HVZ88_18450 PF11975 Family 4 glycosyl hydrolase C-terminal domain HVZ88_18450 PF02056 Family 4 glycosyl hydrolase HVZ88_18470 PF09997 Predicted membrane protein (DUF2238) HVZ88_18475 PF05683 Fumarase C-terminus HVZ88_18475 PF05681 Fumarate hydratase (Fumerase) HVZ88_18480 PF03605 Anaerobic c4-dicarboxylate membrane transporter HVZ88_18485 PF00072 Response regulator receiver domain HVZ88_18490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_18490 PF00989 PAS fold HVZ88_18490 PF17203 Single cache domain 3 HVZ88_18490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HVZ88_18495 PF06902 Divergent 4Fe-4S mono-cluster HVZ88_18500 PF14542 GCN5-related N-acetyl-transferase HVZ88_18505 PF11080 Endoribonuclease GhoS HVZ88_18510 PF10753 Toxin GhoT_OrtT HVZ88_18515 PF01336 OB-fold nucleic acid binding domain HVZ88_18515 PF00152 tRNA synthetases class II (D, K and N) HVZ88_18520 PF00854 POT family HVZ88_18525 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVZ88_18525 PF01276 Orn/Lys/Arg decarboxylase, major domain HVZ88_18525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVZ88_18530 PF13520 Amino acid permease HVZ88_18535 PF00486 Transcriptional regulatory protein, C terminal HVZ88_18535 PF18500 CadC C-terminal domain 1 HVZ88_18540 PF00196 Bacterial regulatory proteins, luxR family HVZ88_18540 PF00563 EAL domain HVZ88_18550 PF03797 Autotransporter beta-domain HVZ88_18570 PF06755 CbtA_toxin of type IV toxin-antitoxin system HVZ88_18575 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HVZ88_18580 PF06174 Protein of unknown function (DUF987) HVZ88_18585 PF04002 RadC-like JAB domain HVZ88_18590 PF03230 Antirestriction protein HVZ88_18595 PF06067 Domain of unknown function (DUF932) HVZ88_18600 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_18600 PF03797 Autotransporter beta-domain HVZ88_18600 PF16168 Adhesin of bacterial autotransporter system, probable stalk HVZ88_18610 PF13148 Protein of unknown function (DUF3987) HVZ88_18625 PF05321 Haemolysin expression modulating protein HVZ88_18645 PF04703 FaeA-like protein HVZ88_18650 PF03333 Adhesin biosynthesis transcription regulatory protein HVZ88_18655 PF00419 Fimbrial protein HVZ88_18660 PF01609 Transposase DDE domain HVZ88_18670 PF00577 Outer membrane usher protein HVZ88_18670 PF13954 PapC N-terminal domain HVZ88_18670 PF13953 PapC C-terminal domain HVZ88_18675 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_18675 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_18680 PF14855 Pilus-assembly fibrillin subunit, chaperone HVZ88_18685 PF00419 Fimbrial protein HVZ88_18700 PF00419 Fimbrial protein HVZ88_18710 PF01323 DSBA-like thioredoxin domain HVZ88_18725 PF08479 POTRA domain, ShlB-type HVZ88_18725 PF17287 POTRA domain HVZ88_18725 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HVZ88_18730 PF02794 RTX toxin acyltransferase family HVZ88_18735 PF13332 Hemagglutinin repeat HVZ88_18735 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_18735 PF04829 Pre-toxin domain with VENN motif HVZ88_18735 PF05860 haemagglutination activity domain HVZ88_18760 PF04829 Pre-toxin domain with VENN motif HVZ88_18760 PF05860 haemagglutination activity domain HVZ88_18760 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_18760 PF13332 Hemagglutinin repeat HVZ88_18765 PF04829 Pre-toxin domain with VENN motif HVZ88_18765 PF13018 Extended Signal Peptide of Type V secretion system HVZ88_18765 PF05860 haemagglutination activity domain HVZ88_18765 PF13332 Hemagglutinin repeat HVZ88_18790 PF13086 AAA domain HVZ88_18790 PF13087 AAA domain HVZ88_18790 PF13195 Protein of unknown function (DUF4011) HVZ88_18795 PF11922 Domain of unknown function (DUF3440) HVZ88_18795 PF01507 Phosphoadenosine phosphosulfate reductase family HVZ88_18800 PF02195 ParB-like nuclease domain HVZ88_18820 PF08494 DEAD/H associated HVZ88_18820 PF00271 Helicase conserved C-terminal domain HVZ88_18820 PF00270 DEAD/DEAH box helicase HVZ88_18840 PF13505 Outer membrane protein beta-barrel domain HVZ88_18845 PF00884 Sulfatase HVZ88_18850 PF13356 Arm DNA-binding domain HVZ88_18850 PF00589 Phage integrase family HVZ88_18865 PF11412 Disulphide bond corrector protein DsbC HVZ88_18865 PF02683 Cytochrome C biogenesis protein transmembrane region HVZ88_18870 PF03091 CutA1 divalent ion tolerance protein HVZ88_18875 PF03605 Anaerobic c4-dicarboxylate membrane transporter HVZ88_18880 PF00206 Lyase HVZ88_18880 PF10415 Fumarase C C-terminus HVZ88_18885 PF04186 FxsA cytoplasmic membrane protein HVZ88_18890 PF13520 Amino acid permease HVZ88_18895 PF00166 Chaperonin 10 Kd subunit HVZ88_18900 PF00118 TCP-1/cpn60 chaperonin family HVZ88_18905 PF13698 Domain of unknown function (DUF4156) HVZ88_18910 PF15922 YjeJ-like HVZ88_18915 PF04055 Radical SAM superfamily HVZ88_18920 PF01132 Elongation factor P (EF-P) OB domain HVZ88_18920 PF08207 Elongation factor P (EF-P) KOW-like domain HVZ88_18920 PF09285 Elongation factor P, C-terminal HVZ88_18925 PF08085 Entericidin EcnA/B family HVZ88_18930 PF08085 Entericidin EcnA/B family HVZ88_18935 PF00893 Small Multidrug Resistance protein HVZ88_18940 PF08212 Lipocalin-like domain HVZ88_18945 PF00144 Beta-lactamase HVZ88_18950 PF02313 Fumarate reductase subunit D HVZ88_18955 PF02300 Fumarate reductase subunit C HVZ88_18960 PF13085 2Fe-2S iron-sulfur cluster binding domain HVZ88_18960 PF13183 4Fe-4S dicluster domain HVZ88_18965 PF00890 FAD binding domain HVZ88_18965 PF02910 Fumarate reductase flavoprotein C-term HVZ88_18970 PF00152 tRNA synthetases class II (D, K and N) HVZ88_18975 PF13520 Amino acid permease HVZ88_18985 PF10840 Protein of unknown function (DUF2645) HVZ88_18990 PF12795 Mechanosensitive ion channel porin domain HVZ88_18990 PF12794 Mechanosensitive ion channel inner membrane domain 1 HVZ88_18990 PF00924 Mechanosensitive ion channel HVZ88_18995 PF02666 Phosphatidylserine decarboxylase HVZ88_19000 PF03193 RsgA GTPase HVZ88_19005 PF00929 Exonuclease HVZ88_19030 PF08331 Domain of unknown function (DUF1730) HVZ88_19035 PF03853 YjeF-related protein N-terminus HVZ88_19035 PF01256 Carbohydrate kinase HVZ88_19040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HVZ88_19045 PF01520 N-acetylmuramoyl-L-alanine amidase HVZ88_19050 PF01119 DNA mismatch repair protein, C-terminal domain HVZ88_19050 PF08676 MutL C terminal dimerisation domain HVZ88_19060 PF17209 Hfq protein HVZ88_19065 PF16360 GTP-binding GTPase Middle Region HVZ88_19065 PF13167 GTP-binding GTPase N-terminal HVZ88_19065 PF01926 50S ribosome-binding GTPase HVZ88_19070 PF12221 Bacterial membrane protein N terminal HVZ88_19070 PF01145 SPFH domain / Band 7 family HVZ88_19075 PF01145 SPFH domain / Band 7 family HVZ88_19080 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HVZ88_19085 PF00709 Adenylosuccinate synthetase HVZ88_19090 PF02082 Transcriptional regulator HVZ88_19095 PF00773 RNB domain HVZ88_19095 PF08461 Ribonuclease R winged-helix domain HVZ88_19095 PF17876 Cold shock domain HVZ88_19095 PF00575 S1 RNA binding domain HVZ88_19095 PF08206 Ribonuclease B OB domain HVZ88_19100 PF08032 RNA 2'-O ribose methyltransferase substrate binding HVZ88_19100 PF00588 SpoU rRNA Methylase family HVZ88_19105 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) HVZ88_19110 PF04012 PspA/IM30 family HVZ88_19115 PF10679 Protein of unknown function (DUF2491) HVZ88_19120 PF03994 Domain of Unknown Function (DUF350) HVZ88_19125 PF06693 Protein of unknown function (DUF1190) HVZ88_19130 PF03738 Glutathionylspermidine synthase preATP-grasp HVZ88_19135 PF02770 Acyl-CoA dehydrogenase, middle domain HVZ88_19135 PF18158 Adaptive response protein AidB N-terminal domain HVZ88_19135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVZ88_19140 PF07338 Protein of unknown function (DUF1471) HVZ88_19145 PF07338 Protein of unknown function (DUF1471) HVZ88_19150 PF00326 Prolyl oligopeptidase family HVZ88_19155 PF00455 DeoR C terminal sensor domain HVZ88_19155 PF08220 DeoR-like helix-turn-helix domain HVZ88_19165 PF03611 PTS system sugar-specific permease component HVZ88_19170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_19175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_19180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HVZ88_19185 PF01261 Xylose isomerase-like TIM barrel HVZ88_19190 PF00596 Class II Aldolase and Adducin N-terminal domain HVZ88_19195 PF07338 Protein of unknown function (DUF1471) HVZ88_19200 PF01250 Ribosomal protein S6 HVZ88_19205 PF00436 Single-strand binding protein family HVZ88_19210 PF01084 Ribosomal protein S18 HVZ88_19215 PF01281 Ribosomal protein L9, N-terminal domain HVZ88_19215 PF03948 Ribosomal protein L9, C-terminal domain HVZ88_19220 PF07690 Major Facilitator Superfamily HVZ88_19225 PF02910 Fumarate reductase flavoprotein C-term HVZ88_19225 PF00890 FAD binding domain HVZ88_19230 PF01144 Coenzyme A transferase HVZ88_19235 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_19250 PF17938 Tetracyclin repressor-like, C-terminal domain HVZ88_19255 PF04225 Opacity-associated protein A LysM-like domain HVZ88_19255 PF08525 Opacity-associated protein A N-terminal motif HVZ88_19260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HVZ88_19260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVZ88_19265 PF00324 Amino acid permease HVZ88_19270 PF01814 Hemerythrin HHE cation binding domain HVZ88_19270 PF04405 Domain of Unknown function (DUF542) HVZ88_19275 PF00892 EamA-like transporter family HVZ88_19280 PF05368 NmrA-like family HVZ88_19285 PF01638 HxlR-like helix-turn-helix HVZ88_19290 PF02872 5'-nucleotidase, C-terminal domain HVZ88_19290 PF00149 Calcineurin-like phosphoesterase HVZ88_19295 PF00459 Inositol monophosphatase family HVZ88_19300 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HVZ88_19305 PF06526 Protein of unknown function (DUF1107) HVZ88_19310 PF00571 CBS domain HVZ88_19310 PF01595 Cyclin M transmembrane N-terminal domain HVZ88_19310 PF03471 Transporter associated domain HVZ88_19315 PF01625 Peptide methionine sulfoxide reductase HVZ88_19320 PF17243 POTRA domain TamA domain 1 HVZ88_19320 PF07244 Surface antigen variable number repeat HVZ88_19320 PF01103 Surface antigen HVZ88_19325 PF04357 TamB, inner membrane protein subunit of TAM complex HVZ88_19330 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HVZ88_19335 PF00719 Inorganic pyrophosphatase HVZ88_19340 PF13407 Periplasmic binding protein domain HVZ88_19345 PF00005 ABC transporter HVZ88_19350 PF02653 Branched-chain amino acid transport system / permease component HVZ88_19355 PF02653 Branched-chain amino acid transport system / permease component HVZ88_19360 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HVZ88_19365 PF01225 Mur ligase family, catalytic domain HVZ88_19365 PF08245 Mur ligase middle domain HVZ88_19365 PF02875 Mur ligase family, glutamate ligase domain HVZ88_19370 PF04751 Protein of unknown function (DUF615) HVZ88_19375 PF01523 Putative modulator of DNA gyrase HVZ88_19380 PF07361 Cytochrome b562 HVZ88_19390 PF13597 Anaerobic ribonucleoside-triphosphate reductase HVZ88_19390 PF03477 ATP cone domain HVZ88_19395 PF00128 Alpha amylase, catalytic domain HVZ88_19395 PF11941 Domain of unknown function (DUF3459) HVZ88_19400 PF02378 Phosphotransferase system, EIIC HVZ88_19400 PF00367 phosphotransferase system, EIIB HVZ88_19405 PF00356 Bacterial regulatory proteins, lacI family HVZ88_19410 PF17059 MgtA leader peptide HVZ88_19415 PF00690 Cation transporter/ATPase, N-terminus HVZ88_19415 PF00689 Cation transporting ATPase, C-terminus HVZ88_19420 PF01042 Endoribonuclease L-PSP HVZ88_19425 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HVZ88_19425 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HVZ88_19430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVZ88_19430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVZ88_19435 PF08052 PyrBI operon leader peptide HVZ88_19440 PF01042 Endoribonuclease L-PSP HVZ88_19450 PF00440 Bacterial regulatory proteins, tetR family HVZ88_19455 PF04074 YhcH/YjgK/YiaL HVZ88_19465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVZ88_19465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVZ88_19470 PF06877 Regulator of ribonuclease activity B HVZ88_19475 PF00583 Acetyltransferase (GNAT) family HVZ88_19480 PF05987 Bacterial protein of unknown function (DUF898) HVZ88_19485 PF10458 Valyl tRNA synthetase tRNA binding arm HVZ88_19485 PF00133 tRNA synthetases class I (I, L, M and V) HVZ88_19485 PF08264 Anticodon-binding domain of tRNA HVZ88_19490 PF04364 DNA polymerase III chi subunit, HolC HVZ88_19495 PF00883 Cytosol aminopeptidase family, catalytic domain HVZ88_19495 PF02789 Cytosol aminopeptidase family, N-terminal domain HVZ88_19500 PF03739 Lipopolysaccharide export system permease LptF/LptG HVZ88_19505 PF03739 Lipopolysaccharide export system permease LptF/LptG HVZ88_19510 PF05872 Bacterial protein of unknown function (DUF853) HVZ88_19515 PF00107 Zinc-binding dehydrogenase HVZ88_19515 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_19525 PF00589 Phage integrase family HVZ88_19525 PF13356 Arm DNA-binding domain HVZ88_19600 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase HVZ88_19610 PF06178 Oligogalacturonate-specific porin protein (KdgM) HVZ88_19620 PF00589 Phage integrase family HVZ88_19625 PF00589 Phage integrase family HVZ88_19630 PF00419 Fimbrial protein HVZ88_19635 PF00419 Fimbrial protein HVZ88_19640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_19640 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_19645 PF13953 PapC C-terminal domain HVZ88_19645 PF13954 PapC N-terminal domain HVZ88_19645 PF00577 Outer membrane usher protein HVZ88_19650 PF00419 Fimbrial protein HVZ88_19660 PF09160 FimH, mannose binding HVZ88_19660 PF00419 Fimbrial protein HVZ88_19670 PF03786 D-mannonate dehydratase (UxuA) HVZ88_19675 PF08125 Mannitol dehydrogenase C-terminal domain HVZ88_19675 PF01232 Mannitol dehydrogenase Rossmann domain HVZ88_19680 PF07729 FCD domain HVZ88_19680 PF00392 Bacterial regulatory proteins, gntR family HVZ88_19685 PF10887 Protein of unknown function (DUF2686) HVZ88_19695 PF04965 Gene 25-like lysozyme HVZ88_19700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_19700 PF03466 LysR substrate binding domain HVZ88_19705 PF01979 Amidohydrolase family HVZ88_19710 PF07670 Nucleoside recognition HVZ88_19715 PF07670 Nucleoside recognition HVZ88_19720 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family HVZ88_19725 PF06779 Uncharacterised MFS-type transporter YbfB HVZ88_19730 PF06977 SdiA-regulated HVZ88_19735 PF11823 Protein of unknown function (DUF3343) HVZ88_19740 PF01869 BadF/BadG/BcrA/BcrD ATPase family HVZ88_19745 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HVZ88_19750 PF04286 Protein of unknown function (DUF445) HVZ88_19755 PF07690 Major Facilitator Superfamily HVZ88_19760 PF04754 Putative transposase, YhgA-like HVZ88_19765 PF00155 Aminotransferase class I and II HVZ88_19765 PF00392 Bacterial regulatory proteins, gntR family HVZ88_19770 PF06568 Domain of unknown function (DUF1127) HVZ88_19780 PF08845 Toxin SymE, type I toxin-antitoxin system HVZ88_19785 PF01420 Type I restriction modification DNA specificity domain HVZ88_19810 PF07683 Cobalamin synthesis protein cobW C-terminal domain HVZ88_19810 PF02492 CobW/HypB/UreG, nucleotide-binding domain HVZ88_19815 PF04328 Selenoprotein, putative HVZ88_19820 PF13722 5TM C-terminal transporter carbon starvation CstA HVZ88_19820 PF02554 Carbon starvation protein CstA HVZ88_19825 PF01613 Flavin reductase like domain HVZ88_19830 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HVZ88_19830 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HVZ88_19840 PF07690 Major Facilitator Superfamily HVZ88_19845 PF03328 HpcH/HpaI aldolase/citrate lyase family HVZ88_19850 PF01557 Fumarylacetoacetate (FAA) hydrolase family HVZ88_19855 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase HVZ88_19860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HVZ88_19865 PF00171 Aldehyde dehydrogenase family HVZ88_19870 PF01557 Fumarylacetoacetate (FAA) hydrolase family HVZ88_19875 PF01047 MarR family HVZ88_19880 PF02203 Tar ligand binding domain homologue HVZ88_19880 PF00672 HAMP domain HVZ88_19880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVZ88_19885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HVZ88_19895 PF03480 Bacterial extracellular solute-binding protein, family 7 HVZ88_19900 PF00999 Sodium/hydrogen exchanger family HVZ88_19905 PF00392 Bacterial regulatory proteins, gntR family HVZ88_19905 PF07729 FCD domain HVZ88_19910 PF00107 Zinc-binding dehydrogenase HVZ88_19910 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_19915 PF00884 Sulfatase HVZ88_19920 PF10696 Protein of unknown function (DUF2501) HVZ88_19925 PF01695 IstB-like ATP binding protein HVZ88_19930 PF17948 DnaT DNA-binding domain HVZ88_19935 PF12821 Threonine/Serine exporter, ThrE HVZ88_19940 PF06738 Putative threonine/serine exporter HVZ88_19945 PF00196 Bacterial regulatory proteins, luxR family HVZ88_19950 PF00196 Bacterial regulatory proteins, luxR family HVZ88_19955 PF06276 Ferric iron reductase FhuF-like transporter HVZ88_19955 PF11575 FhuF 2Fe-2S C-terminal domain HVZ88_19960 PF07256 Protein of unknown function (DUF1435) HVZ88_19980 PF08468 Methyltransferase small domain N-terminal HVZ88_19980 PF05175 Methyltransferase small domain HVZ88_19985 PF03603 DNA polymerase III psi subunit HVZ88_19990 PF00583 Acetyltransferase (GNAT) family HVZ88_19995 PF13419 Haloacid dehalogenase-like hydrolase HVZ88_20000 PF03144 Elongation factor Tu domain 2 HVZ88_20000 PF00009 Elongation factor Tu GTP binding domain HVZ88_20000 PF16658 Class II release factor RF3, C-terminal domain HVZ88_20005 PF04972 BON domain HVZ88_20010 PF07043 Protein of unknown function (DUF1328) HVZ88_20015 PF01734 Patatin-like phospholipase HVZ88_20020 PF01026 TatD related DNase HVZ88_20025 PF04055 Radical SAM superfamily HVZ88_20030 PF11230 Protein of unknown function (DUF3029) HVZ88_20035 PF01791 DeoC/LacD family aldolase HVZ88_20040 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HVZ88_20040 PF00591 Glycosyl transferase family, a/b domain HVZ88_20040 PF02885 Glycosyl transferase family, helical bundle domain HVZ88_20045 PF01676 Metalloenzyme superfamily HVZ88_20050 PF01048 Phosphorylase superfamily HVZ88_20060 PF03099 Biotin/lipoate A/B protein ligase family HVZ88_20060 PF10437 Bacterial lipoate protein ligase C-terminus HVZ88_20065 PF10144 Bacterial virulence factor haemolysin HVZ88_20070 PF18429 Domain of unknown function (DUF5609) HVZ88_20075 PF18073 Rubredoxin metal binding domain HVZ88_20080 PF01381 Helix-turn-helix HVZ88_20080 PF13521 AAA domain HVZ88_20085 PF00005 ABC transporter HVZ88_20085 PF12848 ABC transporter HVZ88_20090 PF01464 Transglycosylase SLT domain HVZ88_20090 PF14718 Soluble lytic murein transglycosylase L domain HVZ88_20095 PF01371 Trp repressor protein HVZ88_20100 PF01931 Protein of unknown function DUF84 HVZ88_20105 PF00300 Histidine phosphatase superfamily (branch 1) HVZ88_20110 PF12833 Helix-turn-helix domain HVZ88_20110 PF06445 GyrI-like small molecule binding domain HVZ88_20115 PF05981 CreA protein HVZ88_20120 PF00072 Response regulator receiver domain HVZ88_20120 PF00486 Transcriptional regulatory protein, C terminal HVZ88_20125 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_20125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_20125 PF00672 HAMP domain HVZ88_20130 PF06123 Inner membrane protein CreD HVZ88_20135 PF00486 Transcriptional regulatory protein, C terminal HVZ88_20135 PF00072 Response regulator receiver domain HVZ88_20145 PF00588 SpoU rRNA Methylase family HVZ88_20150 PF08254 Threonine leader peptide HVZ88_20155 PF13840 ACT domain HVZ88_20155 PF00696 Amino acid kinase family HVZ88_20155 PF01842 ACT domain HVZ88_20155 PF00742 Homoserine dehydrogenase HVZ88_20155 PF03447 Homoserine dehydrogenase, NAD binding domain HVZ88_20160 PF00288 GHMP kinases N terminal domain HVZ88_20160 PF08544 GHMP kinases C terminal HVZ88_20165 PF00291 Pyridoxal-phosphate dependent enzyme HVZ88_20165 PF14821 Threonine synthase N terminus HVZ88_20170 PF10697 Protein of unknown function (DUF2502) HVZ88_20175 PF03883 Peroxide stress protein YaaA HVZ88_20180 PF01235 Sodium:alanine symporter family HVZ88_20185 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVZ88_20190 PF00994 Probable molybdopterin binding domain HVZ88_20195 PF01184 GPR1/FUN34/yaaH family HVZ88_20200 PF03981 Ubiquinol-cytochrome C chaperone HVZ88_20200 PF13099 Domain of unknown function (DUF3944) HVZ88_20205 PF10807 Protein of unknown function (DUF2541) HVZ88_20210 PF00012 Hsp70 protein HVZ88_20215 PF00684 DnaJ central domain HVZ88_20215 PF01556 DnaJ C terminal domain HVZ88_20215 PF00226 DnaJ domain HVZ88_20220 PF01609 Transposase DDE domain HVZ88_20225 PF01848 Hok/gef family HVZ88_20230 PF06965 Na+/H+ antiporter 1 HVZ88_20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_20235 PF03466 LysR substrate binding domain HVZ88_20255 PF01649 Ribosomal protein S20 HVZ88_20260 PF10837 Protein of unknown function (DUF2575) HVZ88_20265 PF06574 FAD synthetase HVZ88_20265 PF01687 Riboflavin kinase HVZ88_20270 PF06827 Zinc finger found in FPG and IleRS HVZ88_20270 PF00133 tRNA synthetases class I (I, L, M and V) HVZ88_20270 PF08264 Anticodon-binding domain of tRNA HVZ88_20275 PF01252 Signal peptidase (SPase) II HVZ88_20280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVZ88_20285 PF02401 LytB protein HVZ88_20290 PF01156 Inosine-uridine preferring nucleoside hydrolase HVZ88_20295 PF01113 Dihydrodipicolinate reductase, N-terminus HVZ88_20295 PF05173 Dihydrodipicolinate reductase, C-terminus HVZ88_20300 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HVZ88_20300 PF00117 Glutamine amidotransferase class-I HVZ88_20305 PF02142 MGS-like domain HVZ88_20305 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HVZ88_20305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HVZ88_20310 PF07180 CaiF/GrlA transcriptional regulator HVZ88_20315 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_20320 PF00378 Enoyl-CoA hydratase/isomerase HVZ88_20325 PF00501 AMP-binding enzyme HVZ88_20325 PF13193 AMP-binding enzyme C-terminal domain HVZ88_20330 PF02515 CoA-transferase family III HVZ88_20335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HVZ88_20335 PF02770 Acyl-CoA dehydrogenase, middle domain HVZ88_20335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVZ88_20340 PF02028 BCCT, betaine/carnitine/choline family transporter HVZ88_20345 PF01012 Electron transfer flavoprotein domain HVZ88_20350 PF01012 Electron transfer flavoprotein domain HVZ88_20350 PF00766 Electron transfer flavoprotein FAD-binding domain HVZ88_20355 PF01494 FAD binding domain HVZ88_20365 PF00083 Sugar (and other) transporter HVZ88_20370 PF02525 Flavodoxin-like fold HVZ88_20375 PF00999 Sodium/hydrogen exchanger family HVZ88_20375 PF02254 TrkA-N domain HVZ88_20380 PF00186 Dihydrofolate reductase HVZ88_20385 PF00149 Calcineurin-like phosphoesterase HVZ88_20390 PF04379 ApaG domain HVZ88_20395 PF00398 Ribosomal RNA adenine dimethylase HVZ88_20400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HVZ88_20405 PF00639 PPIC-type PPIASE domain HVZ88_20405 PF09312 SurA N-terminal domain HVZ88_20410 PF04453 LPS transport system D HVZ88_20410 PF03968 OstA-like protein HVZ88_20415 PF00226 DnaJ domain HVZ88_20415 PF05099 Tellurite resistance protein TerB HVZ88_20435 PF00849 RNA pseudouridylate synthase HVZ88_20440 PF18339 RapA N-terminal Tudor like domain 1 HVZ88_20440 PF00271 Helicase conserved C-terminal domain HVZ88_20440 PF12137 RNA polymerase recycling family C-terminal HVZ88_20440 PF00176 SNF2 family N-terminal domain HVZ88_20440 PF18337 RapA N-terminal Tudor like domain HVZ88_20445 PF00136 DNA polymerase family B HVZ88_20445 PF03104 DNA polymerase family B, exonuclease domain HVZ88_20450 PF00596 Class II Aldolase and Adducin N-terminal domain HVZ88_20455 PF11762 L-arabinose isomerase C-terminal domain HVZ88_20455 PF02610 L-arabinose isomerase HVZ88_20460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVZ88_20465 PF12833 Helix-turn-helix domain HVZ88_20465 PF02311 AraC-like ligand binding domain HVZ88_20470 PF09335 SNARE associated Golgi protein HVZ88_20475 PF00005 ABC transporter HVZ88_20480 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_20490 PF12793 Sugar transport-related sRNA regulator N-term HVZ88_20490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_20500 PF07690 Major Facilitator Superfamily HVZ88_20505 PF00694 Aconitase C-terminal domain HVZ88_20510 PF00330 Aconitase family (aconitate hydratase) HVZ88_20515 PF00180 Isocitrate/isopropylmalate dehydrogenase HVZ88_20520 PF08502 LeuA allosteric (dimerisation) domain HVZ88_20520 PF00682 HMGL-like HVZ88_20525 PF08054 Leucine operon leader peptide HVZ88_20530 PF03466 LysR substrate binding domain HVZ88_20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_20540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_20540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVZ88_20540 PF00205 Thiamine pyrophosphate enzyme, central domain HVZ88_20545 PF10369 Small subunit of acetolactate synthase HVZ88_20555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HVZ88_20555 PF00356 Bacterial regulatory proteins, lacI family HVZ88_20560 PF02381 MraZ protein, putative antitoxin-like HVZ88_20565 PF01795 MraW methylase family HVZ88_20570 PF04999 Cell division protein FtsL HVZ88_20575 PF03717 Penicillin-binding Protein dimerisation domain HVZ88_20575 PF00905 Penicillin binding protein transpeptidase domain HVZ88_20580 PF01225 Mur ligase family, catalytic domain HVZ88_20580 PF08245 Mur ligase middle domain HVZ88_20580 PF02875 Mur ligase family, glutamate ligase domain HVZ88_20585 PF02875 Mur ligase family, glutamate ligase domain HVZ88_20585 PF08245 Mur ligase middle domain HVZ88_20585 PF01225 Mur ligase family, catalytic domain HVZ88_20590 PF00953 Glycosyl transferase family 4 HVZ88_20590 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HVZ88_20595 PF02875 Mur ligase family, glutamate ligase domain HVZ88_20595 PF08245 Mur ligase middle domain HVZ88_20600 PF01098 Cell cycle protein HVZ88_20605 PF04101 Glycosyltransferase family 28 C-terminal domain HVZ88_20605 PF03033 Glycosyltransferase family 28 N-terminal domain HVZ88_20610 PF02875 Mur ligase family, glutamate ligase domain HVZ88_20610 PF08245 Mur ligase middle domain HVZ88_20610 PF01225 Mur ligase family, catalytic domain HVZ88_20615 PF07478 D-ala D-ala ligase C-terminus HVZ88_20615 PF01820 D-ala D-ala ligase N-terminus HVZ88_20620 PF03799 Cell division protein FtsQ HVZ88_20620 PF08478 POTRA domain, FtsQ-type HVZ88_20625 PF02491 SHS2 domain inserted in FTSA HVZ88_20630 PF12327 FtsZ family, C-terminal domain HVZ88_20630 PF00091 Tubulin/FtsZ family, GTPase domain HVZ88_20635 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HVZ88_20640 PF06558 Secretion monitor precursor protein (SecM) HVZ88_20645 PF01043 SecA preprotein cross-linking domain HVZ88_20645 PF07516 SecA Wing and Scaffold domain HVZ88_20645 PF02810 SEC-C motif HVZ88_20645 PF07517 SecA DEAD-like domain HVZ88_20650 PF00293 NUDIX domain HVZ88_20655 PF03884 DNA gyrase inhibitor YacG HVZ88_20660 PF07072 Cell division protein HVZ88_20665 PF01121 Dephospho-CoA kinase HVZ88_20675 PF00478 IMP dehydrogenase / GMP reductase domain HVZ88_20680 PF00482 Type II secretion system (T2SS), protein F HVZ88_20685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HVZ88_20685 PF00437 Type II/IV secretion system protein HVZ88_20690 PF07963 Prokaryotic N-terminal methylation motif HVZ88_20695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HVZ88_20695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HVZ88_20700 PF01510 N-acetylmuramoyl-L-alanine amidase HVZ88_20705 PF17113 Regulatory signalling modulator protein AmpE HVZ88_20710 PF00324 Amino acid permease HVZ88_20715 PF07729 FCD domain HVZ88_20715 PF00392 Bacterial regulatory proteins, gntR family HVZ88_20720 PF17831 Pyruvate dehydrogenase E1 component middle domain HVZ88_20720 PF00456 Transketolase, thiamine diphosphate binding domain HVZ88_20725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HVZ88_20725 PF02817 e3 binding domain HVZ88_20725 PF00364 Biotin-requiring enzyme HVZ88_20730 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_20730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVZ88_20735 PF11737 Protein of unknown function (DUF3300) HVZ88_20740 PF00330 Aconitase family (aconitate hydratase) HVZ88_20740 PF06434 Aconitate hydratase 2 N-terminus HVZ88_20740 PF11791 Aconitate B N-terminal domain HVZ88_20745 PF06062 Uncharacterised protein family (UPF0231) HVZ88_20750 PF02675 S-adenosylmethionine decarboxylase HVZ88_20755 PF17284 Spermidine synthase tetramerisation domain HVZ88_20760 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HVZ88_20765 PF07731 Multicopper oxidase HVZ88_20765 PF07732 Multicopper oxidase HVZ88_20765 PF00394 Multicopper oxidase HVZ88_20770 PF01011 PQQ enzyme repeat HVZ88_20775 PF00156 Phosphoribosyl transferase domain HVZ88_20780 PF00484 Carbonic anhydrase HVZ88_20785 PF00005 ABC transporter HVZ88_20790 PF01061 ABC-2 type transporter HVZ88_20795 PF03610 PTS system fructose IIA component HVZ88_20800 PF01522 Polysaccharide deacetylase HVZ88_20805 PF02261 Aspartate decarboxylase HVZ88_20810 PF04754 Putative transposase, YhgA-like HVZ88_20815 PF02569 Pantoate-beta-alanine ligase HVZ88_20820 PF02548 Ketopantoate hydroxymethyltransferase HVZ88_20825 PF00419 Fimbrial protein HVZ88_20830 PF00419 Fimbrial protein HVZ88_20835 PF00419 Fimbrial protein HVZ88_20840 PF00419 Fimbrial protein HVZ88_20845 PF13954 PapC N-terminal domain HVZ88_20845 PF00577 Outer membrane usher protein HVZ88_20845 PF13953 PapC C-terminal domain HVZ88_20850 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_20850 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_20855 PF00419 Fimbrial protein HVZ88_20860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HVZ88_20865 PF01743 Poly A polymerase head domain HVZ88_20865 PF12626 Polymerase A arginine-rich C-terminus HVZ88_20865 PF12627 Probable RNA and SrmB- binding site of polymerase A HVZ88_20870 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVZ88_20875 PF01258 Prokaryotic dksA/traR C4-type zinc finger HVZ88_20880 PF03749 Sugar fermentation stimulation protein RE domain HVZ88_20880 PF17746 SfsA N-terminal OB domain HVZ88_20885 PF02834 LigT like Phosphoesterase HVZ88_20890 PF08482 ATP-dependent helicase C-terminal HVZ88_20890 PF04408 Helicase associated domain (HA2) HVZ88_20890 PF00270 DEAD/DEAH box helicase HVZ88_20890 PF00271 Helicase conserved C-terminal domain HVZ88_20895 PF14814 Bifunctional transglycosylase second domain HVZ88_20895 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal HVZ88_20895 PF00912 Transglycosylase HVZ88_20895 PF00905 Penicillin binding protein transpeptidase domain HVZ88_20900 PF07715 TonB-dependent Receptor Plug Domain HVZ88_20900 PF00593 TonB dependent receptor HVZ88_20905 PF00005 ABC transporter HVZ88_20910 PF01497 Periplasmic binding protein HVZ88_20915 PF01032 FecCD transport family HVZ88_20920 PF00202 Aminotransferase class-III HVZ88_20925 PF00654 Voltage gated chloride channel HVZ88_20935 PF01521 Iron-sulphur cluster biosynthesis HVZ88_20940 PF03458 UPF0126 domain HVZ88_20945 PF01497 Periplasmic binding protein HVZ88_20950 PF01048 Phosphorylase superfamily HVZ88_20955 PF13286 Phosphohydrolase-associated domain HVZ88_20955 PF01966 HD domain HVZ88_20960 PF00595 PDZ domain HVZ88_20965 PF13556 PucR C-terminal helix-turn-helix domain HVZ88_20965 PF17853 GGDEF-like domain HVZ88_20965 PF05651 Putative sugar diacid recognition HVZ88_20970 PF11944 Protein of unknown function (DUF3461) HVZ88_20975 PF00149 Calcineurin-like phosphoesterase HVZ88_20980 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_20980 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HVZ88_20980 PF14602 Hexapeptide repeat of succinyl-transferase HVZ88_20985 PF08335 GlnD PII-uridylyltransferase HVZ88_20985 PF01842 ACT domain HVZ88_20985 PF01966 HD domain HVZ88_20985 PF01909 Nucleotidyltransferase domain HVZ88_20990 PF00557 Metallopeptidase family M24 HVZ88_20995 PF00318 Ribosomal protein S2 HVZ88_21000 PF00889 Elongation factor TS HVZ88_21005 PF00696 Amino acid kinase family HVZ88_21010 PF01765 Ribosome recycling factor HVZ88_21015 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HVZ88_21015 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HVZ88_21015 PF13288 DXP reductoisomerase C-terminal domain HVZ88_21020 PF01255 Putative undecaprenyl diphosphate synthase HVZ88_21030 PF17820 PDZ domain HVZ88_21030 PF02163 Peptidase family M50 HVZ88_21035 PF01103 Surface antigen HVZ88_21035 PF07244 Surface antigen variable number repeat HVZ88_21040 PF03938 Outer membrane protein (OmpH-like) HVZ88_21045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HVZ88_21045 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_21050 PF07977 FabA-like domain HVZ88_21055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HVZ88_21055 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_21060 PF02684 Lipid-A-disaccharide synthetase HVZ88_21065 PF01351 Ribonuclease HII HVZ88_21070 PF01336 OB-fold nucleic acid binding domain HVZ88_21070 PF14579 Helix-hairpin-helix motif HVZ88_21070 PF02811 PHP domain HVZ88_21070 PF07733 Bacterial DNA polymerase III alpha NTPase domain HVZ88_21070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HVZ88_21075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HVZ88_21085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HVZ88_21090 PF11734 TilS substrate C-terminal domain HVZ88_21090 PF01171 PP-loop family HVZ88_21090 PF09179 TilS substrate binding domain HVZ88_21095 PF07073 Modulator of Rho-dependent transcription termination (ROF) HVZ88_21100 PF06786 Uncharacterised protein family (UPF0253) HVZ88_21105 PF07152 YaeQ protein HVZ88_21110 PF00472 RF-1 domain HVZ88_21115 PF04170 NlpE N-terminal domain HVZ88_21115 PF17185 NlpE C-terminal OB domain HVZ88_21120 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HVZ88_21125 PF03129 Anticodon binding domain HVZ88_21125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVZ88_21125 PF04073 Aminoacyl-tRNA editing domain HVZ88_21130 PF18389 TrmO C-terminal domain HVZ88_21130 PF01980 tRNA-methyltransferase O HVZ88_21135 PF16358 RcsF lipoprotein HVZ88_21140 PF03180 NLPA lipoprotein HVZ88_21145 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_21150 PF09383 NIL domain HVZ88_21150 PF00005 ABC transporter HVZ88_21190 PF00248 Aldo/keto reductase family HVZ88_21195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_21195 PF03466 LysR substrate binding domain HVZ88_21200 PF03372 Endonuclease/Exonuclease/phosphatase family HVZ88_21210 PF01464 Transglycosylase SLT domain HVZ88_21210 PF01476 LysM domain HVZ88_21215 PF16123 Hydroxyacylglutathione hydrolase C-terminus HVZ88_21215 PF00753 Metallo-beta-lactamase superfamily HVZ88_21220 PF08241 Methyltransferase domain HVZ88_21225 PF00075 RNase H HVZ88_21230 PF00929 Exonuclease HVZ88_21255 PF05638 Type VI secretion system effector, Hcp HVZ88_21280 PF13808 DDE_Tnp_1-associated HVZ88_21280 PF01609 Transposase DDE domain HVZ88_21285 PF00795 Carbon-nitrogen hydrolase HVZ88_21295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HVZ88_21295 PF02770 Acyl-CoA dehydrogenase, middle domain HVZ88_21295 PF09317 Domain of unknown function (DUF1974) HVZ88_21295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HVZ88_21300 PF13580 SIS domain HVZ88_21305 PF13230 Glutamine amidotransferases class-II HVZ88_21310 PF03734 L,D-transpeptidase catalytic domain HVZ88_21315 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HVZ88_21320 PF04221 RelB antitoxin HVZ88_21325 PF00877 NlpC/P60 family HVZ88_21335 PF00771 FHIPEP family HVZ88_21340 PF01312 FlhB HrpN YscU SpaS Family HVZ88_21345 PF01311 Bacterial export proteins, family 1 HVZ88_21350 PF01313 Bacterial export proteins, family 3 HVZ88_21355 PF00813 FliP family HVZ88_21360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVZ88_21370 PF00158 Sigma-54 interaction domain HVZ88_21370 PF00072 Response regulator receiver domain HVZ88_21370 PF02954 Bacterial regulatory protein, Fis family HVZ88_21375 PF02049 Flagellar hook-basal body complex protein FliE HVZ88_21380 PF01514 Secretory protein of YscJ/FliF family HVZ88_21380 PF08345 Flagellar M-ring protein C-terminal HVZ88_21385 PF14842 FliG N-terminal domain HVZ88_21385 PF14841 FliG middle domain HVZ88_21385 PF01706 FliG C-terminal domain HVZ88_21395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVZ88_21395 PF18269 T3SS EscN ATPase C-terminal domain HVZ88_21405 PF01467 Cytidylyltransferase-like HVZ88_21435 PF00460 Flagella basal body rod protein HVZ88_21440 PF00460 Flagella basal body rod protein HVZ88_21440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_21450 PF07559 Flagellar basal body protein FlaE HVZ88_21450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_21455 PF00460 Flagella basal body rod protein HVZ88_21455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_21460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVZ88_21460 PF00460 Flagella basal body rod protein HVZ88_21465 PF02107 Flagellar L-ring protein HVZ88_21470 PF02119 Flagellar P-ring protein HVZ88_21475 PF10135 Rod binding protein HVZ88_21475 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HVZ88_21485 PF00669 Bacterial flagellin N-terminal helical region HVZ88_21500 PF00700 Bacterial flagellin C-terminal helical region HVZ88_21500 PF00669 Bacterial flagellin N-terminal helical region HVZ88_21505 PF02465 Flagellar hook-associated protein 2 N-terminus HVZ88_21505 PF07196 Flagellin hook IN motif HVZ88_21505 PF07195 Flagellar hook-associated protein 2 C-terminus HVZ88_21530 PF04545 Sigma-70, region 4 HVZ88_21530 PF04542 Sigma-70 region 2 HVZ88_21535 PF01618 MotA/TolQ/ExbB proton channel family HVZ88_21540 PF13677 Membrane MotB of proton-channel complex MotA/MotB HVZ88_21540 PF00691 OmpA family HVZ88_21545 PF11799 impB/mucB/samB family C-terminal domain HVZ88_21545 PF11798 IMS family HHH motif HVZ88_21545 PF00817 impB/mucB/samB family HVZ88_21555 PF13957 Toxin YafO, type II toxin-antitoxin system HVZ88_21560 PF13673 Acetyltransferase (GNAT) domain HVZ88_21570 PF00472 RF-1 domain HVZ88_21575 PF07687 Peptidase dimerisation domain HVZ88_21575 PF01546 Peptidase family M20/M25/M40 HVZ88_21580 PF00156 Phosphoribosyl transferase domain HVZ88_21585 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) HVZ88_21590 PF07417 Sigma factor-binding transcriptional regulator Crl HVZ88_21595 PF00267 Gram-negative porin HVZ88_21600 PF00696 Amino acid kinase family HVZ88_21600 PF01472 PUA domain HVZ88_21605 PF00171 Aldehyde dehydrogenase family HVZ88_21615 PF00589 Phage integrase family HVZ88_21650 PF06992 Replication protein P HVZ88_21680 PF07102 Protein of unknown function (DUF1364) HVZ88_21685 PF05866 Endodeoxyribonuclease RusA HVZ88_21695 PF06530 Phage antitermination protein Q HVZ88_21700 PF00267 Gram-negative porin HVZ88_21705 PF04971 Bacteriophage P21 holin S HVZ88_21710 PF00959 Phage lysozyme HVZ88_21715 PF06085 Lipoprotein Rz1 precursor HVZ88_21720 PF06291 Bor protein HVZ88_21755 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_21760 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HVZ88_21770 PF02796 Helix-turn-helix domain of resolvase HVZ88_21770 PF00239 Resolvase, N terminal domain HVZ88_21780 PF01609 Transposase DDE domain HVZ88_21785 PF12833 Helix-turn-helix domain HVZ88_21795 PF03466 LysR substrate binding domain HVZ88_21800 PF13478 XdhC Rossmann domain HVZ88_21800 PF02625 XdhC and CoxI family HVZ88_21805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HVZ88_21805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HVZ88_21810 PF03450 CO dehydrogenase flavoprotein C-terminal domain HVZ88_21810 PF00941 FAD binding domain in molybdopterin dehydrogenase HVZ88_21815 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_21815 PF01799 [2Fe-2S] binding domain HVZ88_21820 PF07274 Protein of unknown function (DUF1440) HVZ88_21825 PF03692 Putative zinc- or iron-chelating domain HVZ88_21840 PF15976 CS1-pili formation C-terminal HVZ88_21840 PF16967 E-set like domain HVZ88_21845 PF18649 EcpB C-terminal domain HVZ88_21850 PF16449 Fimbrillin MatB HVZ88_21855 PF00196 Bacterial regulatory proteins, luxR family HVZ88_21865 PF00444 Ribosomal protein L36 HVZ88_21870 PF01197 Ribosomal protein L31 HVZ88_21885 PF12833 Helix-turn-helix domain HVZ88_21895 PF04224 Protein of unknown function, DUF417 HVZ88_21900 PF07338 Protein of unknown function (DUF1471) HVZ88_21905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVZ88_21905 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_21910 PF12833 Helix-turn-helix domain HVZ88_21910 PF12852 Cupin HVZ88_21915 PF02754 Cysteine-rich domain HVZ88_21920 PF13183 4Fe-4S dicluster domain HVZ88_21920 PF11870 Domain of unknown function (DUF3390) HVZ88_21920 PF02589 LUD domain HVZ88_21925 PF02589 LUD domain HVZ88_21935 PF00732 GMC oxidoreductase HVZ88_21935 PF05199 GMC oxidoreductase HVZ88_21940 PF00171 Aldehyde dehydrogenase family HVZ88_21945 PF00440 Bacterial regulatory proteins, tetR family HVZ88_21945 PF13977 BetI-type transcriptional repressor, C-terminal HVZ88_21950 PF02028 BCCT, betaine/carnitine/choline family transporter HVZ88_21960 PF00196 Bacterial regulatory proteins, luxR family HVZ88_21960 PF00563 EAL domain HVZ88_21965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_21965 PF03466 LysR substrate binding domain HVZ88_21970 PF06496 Protein of unknown function (DUF1097) HVZ88_21975 PF12796 Ankyrin repeats (3 copies) HVZ88_21980 PF11392 Protein of unknown function (DUF2877) HVZ88_21985 PF02629 CoA binding domain HVZ88_21985 PF00549 CoA-ligase HVZ88_21990 PF06545 Protein of unknown function (DUF1116) HVZ88_22000 PF00696 Amino acid kinase family HVZ88_22005 PF07969 Amidohydrolase family HVZ88_22010 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_22010 PF00107 Zinc-binding dehydrogenase HVZ88_22025 PF01810 LysE type translocator HVZ88_22030 PF07338 Protein of unknown function (DUF1471) HVZ88_22035 PF00158 Sigma-54 interaction domain HVZ88_22035 PF06506 Propionate catabolism activator HVZ88_22035 PF02954 Bacterial regulatory protein, Fis family HVZ88_22045 PF00285 Citrate synthase, C-terminal domain HVZ88_22050 PF03972 MmgE/PrpD family HVZ88_22055 PF16177 Acetyl-coenzyme A synthetase N-terminus HVZ88_22055 PF00501 AMP-binding enzyme HVZ88_22055 PF13193 AMP-binding enzyme C-terminal domain HVZ88_22060 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HVZ88_22065 PF07969 Amidohydrolase family HVZ88_22070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_22070 PF03466 LysR substrate binding domain HVZ88_22075 PF00484 Carbonic anhydrase HVZ88_22080 PF02560 Cyanate lyase C-terminal domain HVZ88_22085 PF07690 Major Facilitator Superfamily HVZ88_22090 PF12464 Maltose acetyltransferase HVZ88_22090 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_22095 PF01306 LacY proton/sugar symporter HVZ88_22100 PF02837 Glycosyl hydrolases family 2, sugar binding domain HVZ88_22100 PF02929 Beta galactosidase small chain HVZ88_22100 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HVZ88_22100 PF16353 Domain of unknown function(DUF4981) HVZ88_22100 PF00703 Glycosyl hydrolases family 2 HVZ88_22105 PF00356 Bacterial regulatory proteins, lacI family HVZ88_22110 PF01614 Bacterial transcriptional regulator HVZ88_22110 PF09339 IclR helix-turn-helix domain HVZ88_22115 PF01494 FAD binding domain HVZ88_22120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HVZ88_22125 PF12697 Alpha/beta hydrolase family HVZ88_22130 PF01557 Fumarylacetoacetate (FAA) hydrolase family HVZ88_22135 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HVZ88_22135 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVZ88_22140 PF00682 HMGL-like HVZ88_22140 PF07836 DmpG-like communication domain HVZ88_22145 PF07690 Major Facilitator Superfamily HVZ88_22150 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HVZ88_22155 PF00756 Putative esterase HVZ88_22160 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_22160 PF00107 Zinc-binding dehydrogenase HVZ88_22165 PF02583 Metal-sensitive transcriptional repressor HVZ88_22175 PF00132 Bacterial transferase hexapeptide (six repeats) HVZ88_22180 PF00535 Glycosyl transferase family 2 HVZ88_22185 PF02585 GlcNAc-PI de-N-acetylase HVZ88_22190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HVZ88_22195 PF00005 ABC transporter HVZ88_22200 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_22205 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HVZ88_22210 PF00490 Delta-aminolevulinic acid dehydratase HVZ88_22215 PF03797 Autotransporter beta-domain HVZ88_22230 PF15977 Winged helix-turn-helix DNA binding HVZ88_22235 PF00144 Beta-lactamase HVZ88_22240 PF05992 SbmA/BacA-like family HVZ88_22245 PF07759 Protein of unknown function (DUF1615) HVZ88_22250 PF10954 Protein of unknown function (DUF2755) HVZ88_22255 PF10953 Protein of unknown function (DUF2754) HVZ88_22260 PF01820 D-ala D-ala ligase N-terminus HVZ88_22260 PF07478 D-ala D-ala ligase C-terminus HVZ88_22270 PF10796 Sigma-S stabilisation anti-adaptor protein HVZ88_22275 PF00245 Alkaline phosphatase HVZ88_22280 PF07769 psiF repeat HVZ88_22285 PF05230 MASE2 domain HVZ88_22285 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_22290 PF14748 Pyrroline-5-carboxylate reductase dimerisation HVZ88_22290 PF03807 NADP oxidoreductase coenzyme F420-dependent HVZ88_22295 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HVZ88_22300 PF01202 Shikimate kinase HVZ88_22305 PF16362 YaiA protein HVZ88_22310 PF07302 AroM protein HVZ88_22315 PF06865 Pyrimidine/purine nucleoside phosphorylase HVZ88_22330 PF04381 Putative exonuclease, RdgC HVZ88_22335 PF00480 ROK family HVZ88_22340 PF07690 Major Facilitator Superfamily HVZ88_22345 PF13476 AAA domain HVZ88_22350 PF12320 Type 5 capsule protein repressor C-terminal domain HVZ88_22350 PF00149 Calcineurin-like phosphoesterase HVZ88_22355 PF00072 Response regulator receiver domain HVZ88_22355 PF00486 Transcriptional regulatory protein, C terminal HVZ88_22360 PF11808 Phosphate regulon sensor protein PhoR HVZ88_22360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_22360 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_22360 PF00989 PAS fold HVZ88_22365 PF05525 Branched-chain amino acid transport protein HVZ88_22370 PF00324 Amino acid permease HVZ88_22375 PF00128 Alpha amylase, catalytic domain HVZ88_22375 PF02903 Alpha amylase, N-terminal ig-like domain HVZ88_22380 PF04336 Acyl carrier protein phosphodiesterase HVZ88_22385 PF02547 Queuosine biosynthesis protein HVZ88_22390 PF01702 Queuine tRNA-ribosyltransferase HVZ88_22395 PF02699 Preprotein translocase subunit HVZ88_22400 PF07549 SecD/SecF GG Motif HVZ88_22400 PF13721 SecD export protein N-terminal TM region HVZ88_22400 PF02355 Protein export membrane protein HVZ88_22405 PF02355 Protein export membrane protein HVZ88_22405 PF07549 SecD/SecF GG Motif HVZ88_22410 PF01844 HNH endonuclease HVZ88_22415 PF03502 Nucleoside-specific channel-forming protein, Tsx HVZ88_22420 PF11622 Protein of unknown function (DUF3251) HVZ88_22425 PF03477 ATP cone domain HVZ88_22430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HVZ88_22430 PF01872 RibD C-terminal domain HVZ88_22435 PF00885 6,7-dimethyl-8-ribityllumazine synthase HVZ88_22440 PF01029 NusB family HVZ88_22445 PF02769 AIR synthase related protein, C-terminal domain HVZ88_22445 PF00586 AIR synthase related protein, N-terminal domain HVZ88_22450 PF04608 Phosphatidylglycerophosphatase A HVZ88_22455 PF00248 Aldo/keto reductase family HVZ88_22460 PF02780 Transketolase, C-terminal domain HVZ88_22460 PF02779 Transketolase, pyrimidine binding domain HVZ88_22460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HVZ88_22465 PF00348 Polyprenyl synthetase HVZ88_22470 PF02609 Exonuclease VII small subunit HVZ88_22475 PF02568 Thiamine biosynthesis protein (ThiI) HVZ88_22475 PF02926 THUMP domain HVZ88_22480 PF01965 DJ-1/PfpI family HVZ88_22485 PF02558 Ketopantoate reductase PanE/ApbA HVZ88_22485 PF08546 Ketopantoate reductase PanE/ApbA C terminal HVZ88_22490 PF04461 Protein of unknown function (DUF520) HVZ88_22495 PF07690 Major Facilitator Superfamily HVZ88_22500 PF01040 UbiA prenyltransferase family HVZ88_22505 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HVZ88_22510 PF00510 Cytochrome c oxidase subunit III HVZ88_22515 PF00115 Cytochrome C and Quinol oxidase polypeptide I HVZ88_22520 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HVZ88_22520 PF06481 COX Aromatic Rich Motif HVZ88_22525 PF07690 Major Facilitator Superfamily HVZ88_22530 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HVZ88_22530 PF03923 Uncharacterized lipoprotein HVZ88_22535 PF01722 BolA-like protein HVZ88_22540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVZ88_22540 PF05698 Bacterial trigger factor protein (TF) C-terminus HVZ88_22540 PF05697 Bacterial trigger factor protein (TF) HVZ88_22545 PF00574 Clp protease HVZ88_22550 PF10431 C-terminal, D2-small domain, of ClpB protein HVZ88_22550 PF07724 AAA domain (Cdc48 subfamily) HVZ88_22550 PF06689 ClpX C4-type zinc finger HVZ88_22555 PF05362 Lon protease (S16) C-terminal proteolytic domain HVZ88_22555 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVZ88_22555 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_22560 PF00216 Bacterial DNA-binding protein HVZ88_22565 PF13145 PPIC-type PPIASE domain HVZ88_22580 PF06508 Queuosine biosynthesis protein QueC HVZ88_22585 PF12793 Sugar transport-related sRNA regulator N-term HVZ88_22585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_22595 PF01037 Lrp/AsnC ligand binding domain HVZ88_22595 PF13404 AsnC-type helix-turn-helix domain HVZ88_22600 PF00664 ABC transporter transmembrane region HVZ88_22600 PF00005 ABC transporter HVZ88_22605 PF00005 ABC transporter HVZ88_22605 PF00664 ABC transporter transmembrane region HVZ88_22610 PF00543 Nitrogen regulatory protein P-II HVZ88_22615 PF00909 Ammonium Transporter Family HVZ88_22625 PF09619 Type III secretion system lipoprotein chaperone (YscW) HVZ88_22630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HVZ88_22640 PF07237 Protein of unknown function (DUF1428) HVZ88_22645 PF12792 CSS motif domain associated with EAL HVZ88_22645 PF00563 EAL domain HVZ88_22650 PF10777 Inner membrane protein YlaC HVZ88_22655 PF14602 Hexapeptide repeat of succinyl-transferase HVZ88_22655 PF12464 Maltose acetyltransferase HVZ88_22660 PF05321 Haemolysin expression modulating protein HVZ88_22665 PF10757 Biofilm formation regulator YbaJ HVZ88_22670 PF00873 AcrB/AcrD/AcrF family HVZ88_22675 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_22675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_22680 PF08361 MAATS-type transcriptional repressor, C-terminal region HVZ88_22680 PF00440 Bacterial regulatory proteins, tetR family HVZ88_22685 PF12794 Mechanosensitive ion channel inner membrane domain 1 HVZ88_22685 PF12795 Mechanosensitive ion channel porin domain HVZ88_22685 PF00924 Mechanosensitive ion channel HVZ88_22690 PF10689 Protein of unknown function (DUF2496) HVZ88_22695 PF07445 Primosomal replication protein priC HVZ88_22700 PF04304 Protein of unknown function (DUF454) HVZ88_22705 PF00156 Phosphoribosyl transferase domain HVZ88_22710 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HVZ88_22710 PF12170 DNA polymerase III tau subunit V interacting with alpha HVZ88_22710 PF12169 DNA polymerase III subunits gamma and tau domain III HVZ88_22715 PF02575 YbaB/EbfC DNA-binding family HVZ88_22720 PF13662 Toprim domain HVZ88_22720 PF02132 RecR protein HVZ88_22725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_22725 PF00183 Hsp90 protein HVZ88_22730 PF05191 Adenylate kinase, active site lid HVZ88_22735 PF00762 Ferrochelatase HVZ88_22740 PF07859 alpha/beta hydrolase fold HVZ88_22745 PF00294 pfkB family carbohydrate kinase HVZ88_22750 PF02254 TrkA-N domain HVZ88_22750 PF00999 Sodium/hydrogen exchanger family HVZ88_22755 PF07690 Major Facilitator Superfamily HVZ88_22760 PF00149 Calcineurin-like phosphoesterase HVZ88_22760 PF02872 5'-nucleotidase, C-terminal domain HVZ88_22765 PF04073 Aminoacyl-tRNA editing domain HVZ88_22770 PF01963 TraB family HVZ88_22775 PF01381 Helix-turn-helix HVZ88_22780 PF00403 Heavy-metal-associated domain HVZ88_22785 PF04960 Glutaminase HVZ88_22790 PF13520 Amino acid permease HVZ88_22795 PF13411 MerR HTH family regulatory protein HVZ88_22800 PF01957 NfeD-like C-terminal, partner-binding HVZ88_22805 PF16200 C-terminal region of band_7 HVZ88_22805 PF01145 SPFH domain / Band 7 family HVZ88_22810 PF00005 ABC transporter HVZ88_22815 PF03649 Uncharacterised protein family (UPF0014) HVZ88_22820 PF00085 Thioredoxin HVZ88_22825 PF00106 short chain dehydrogenase HVZ88_22830 PF13472 GDSL-like Lipase/Acylhydrolase family HVZ88_22835 PF00005 ABC transporter HVZ88_22845 PF14220 Domain of unknown function (DUF4329) HVZ88_22845 PF05593 RHS Repeat HVZ88_22845 PF03527 RHS protein HVZ88_22850 PF15631 NTF2 fold immunity protein HVZ88_22855 PF03527 RHS protein HVZ88_22880 PF03466 LysR substrate binding domain HVZ88_22880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_22885 PF04115 Ureidoglycolate lyase HVZ88_22890 PF09339 IclR helix-turn-helix domain HVZ88_22890 PF01614 Bacterial transcriptional regulator HVZ88_22895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVZ88_22895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_22895 PF00205 Thiamine pyrophosphate enzyme, central domain HVZ88_22900 PF01261 Xylose isomerase-like TIM barrel HVZ88_22905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HVZ88_22905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVZ88_22910 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HVZ88_22915 PF01979 Amidohydrolase family HVZ88_22920 PF00860 Permease family HVZ88_22925 PF02595 Glycerate kinase family HVZ88_22930 PF05899 Protein of unknown function (DUF861) HVZ88_22930 PF07883 Cupin domain HVZ88_22935 PF01546 Peptidase family M20/M25/M40 HVZ88_22940 PF02615 Malate/L-lactate dehydrogenase HVZ88_22945 PF02629 CoA binding domain HVZ88_22945 PF00549 CoA-ligase HVZ88_22950 PF06545 Protein of unknown function (DUF1116) HVZ88_22955 PF11392 Protein of unknown function (DUF2877) HVZ88_22960 PF00696 Amino acid kinase family HVZ88_22965 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HVZ88_22965 PF02222 ATP-grasp domain HVZ88_22970 PF00731 AIR carboxylase HVZ88_22975 PF12850 Calcineurin-like phosphoesterase superfamily domain HVZ88_22980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HVZ88_22985 PF01406 tRNA synthetases class I (C) catalytic domain HVZ88_22985 PF09190 DALR domain HVZ88_22990 PF04307 LexA-binding, inner membrane-associated putative hydrolase HVZ88_23000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HVZ88_23000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HVZ88_23005 PF00419 Fimbrial protein HVZ88_23010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_23010 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_23015 PF00577 Outer membrane usher protein HVZ88_23015 PF13954 PapC N-terminal domain HVZ88_23015 PF13953 PapC C-terminal domain HVZ88_23020 PF00419 Fimbrial protein HVZ88_23025 PF00419 Fimbrial protein HVZ88_23030 PF00072 Response regulator receiver domain HVZ88_23030 PF00196 Bacterial regulatory proteins, luxR family HVZ88_23040 PF12833 Helix-turn-helix domain HVZ88_23060 PF04717 Type VI secretion system, phage-baseplate injector HVZ88_23065 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_23065 PF00672 HAMP domain HVZ88_23065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_23070 PF00072 Response regulator receiver domain HVZ88_23070 PF00486 Transcriptional regulatory protein, C terminal HVZ88_23075 PF02321 Outer membrane efflux protein HVZ88_23080 PF11604 Copper binding periplasmic protein CusF HVZ88_23085 PF00529 HlyD membrane-fusion protein of T1SS HVZ88_23085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_23090 PF00873 AcrB/AcrD/AcrF family HVZ88_23095 PF00324 Amino acid permease HVZ88_23100 PF00924 Mechanosensitive ion channel HVZ88_23105 PF00881 Nitroreductase family HVZ88_23110 PF04237 YjbR HVZ88_23115 PF06643 Protein of unknown function (DUF1158) HVZ88_23120 PF04107 Glutamate-cysteine ligase family 2(GCS2) HVZ88_23130 PF01848 Hok/gef family HVZ88_23135 PF01609 Transposase DDE domain HVZ88_23140 PF01648 4'-phosphopantetheinyl transferase superfamily HVZ88_23140 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HVZ88_23145 PF00593 TonB dependent receptor HVZ88_23145 PF07715 TonB-dependent Receptor Plug Domain HVZ88_23150 PF11806 Domain of unknown function (DUF3327) HVZ88_23150 PF00756 Putative esterase HVZ88_23155 PF03621 MbtH-like protein HVZ88_23160 PF00550 Phosphopantetheine attachment site HVZ88_23160 PF00668 Condensation domain HVZ88_23160 PF13193 AMP-binding enzyme C-terminal domain HVZ88_23160 PF00975 Thioesterase domain HVZ88_23160 PF00501 AMP-binding enzyme HVZ88_23165 PF02706 Chain length determinant protein HVZ88_23170 PF00005 ABC transporter HVZ88_23175 PF01032 FecCD transport family HVZ88_23180 PF01032 FecCD transport family HVZ88_23185 PF05977 Transmembrane secretion effector HVZ88_23190 PF01497 Periplasmic binding protein HVZ88_23195 PF00425 chorismate binding enzyme HVZ88_23200 PF13193 AMP-binding enzyme C-terminal domain HVZ88_23200 PF00501 AMP-binding enzyme HVZ88_23205 PF00550 Phosphopantetheine attachment site HVZ88_23205 PF00857 Isochorismatase family HVZ88_23215 PF03061 Thioesterase superfamily HVZ88_23220 PF02554 Carbon starvation protein CstA HVZ88_23220 PF13722 5TM C-terminal transporter carbon starvation CstA HVZ88_23225 PF04328 Selenoprotein, putative HVZ88_23230 PF00465 Iron-containing alcohol dehydrogenase HVZ88_23235 PF00155 Aminotransferase class I and II HVZ88_23240 PF02195 ParB-like nuclease domain HVZ88_23245 PF11922 Domain of unknown function (DUF3440) HVZ88_23245 PF01507 Phosphoadenosine phosphosulfate reductase family HVZ88_23250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_23250 PF03466 LysR substrate binding domain HVZ88_23255 PF13098 Thioredoxin-like domain HVZ88_23260 PF10417 C-terminal domain of 1-Cys peroxiredoxin HVZ88_23260 PF00578 AhpC/TSA family HVZ88_23265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_23265 PF13192 Thioredoxin domain HVZ88_23270 PF00582 Universal stress protein family HVZ88_23275 PF08240 Alcohol dehydrogenase GroES-like domain HVZ88_23275 PF13823 Alcohol dehydrogenase GroES-associated HVZ88_23275 PF00107 Zinc-binding dehydrogenase HVZ88_23280 PF01272 Transcription elongation factor, GreA/GreB, C-term HVZ88_23280 PF14760 Rnk N-terminus HVZ88_23285 PF00445 Ribonuclease T2 family HVZ88_23290 PF00939 Sodium:sulfate symporter transmembrane region HVZ88_23295 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HVZ88_23300 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HVZ88_23305 PF04223 Citrate lyase, alpha subunit (CitF) HVZ88_23310 PF03328 HpcH/HpaI aldolase/citrate lyase family HVZ88_23315 PF06857 Malonate decarboxylase delta subunit (MdcD) HVZ88_23320 PF08218 Citrate lyase ligase C-terminal domain HVZ88_23325 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HVZ88_23325 PF17203 Single cache domain 3 HVZ88_23325 PF00989 PAS fold HVZ88_23325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_23330 PF00072 Response regulator receiver domain HVZ88_23330 PF12431 Transcriptional regulator HVZ88_23335 PF03606 C4-dicarboxylate anaerobic carrier HVZ88_23340 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP HVZ88_23345 PF00313 'Cold-shock' DNA-binding domain HVZ88_23350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HVZ88_23355 PF00795 Carbon-nitrogen hydrolase HVZ88_23360 PF02416 mttA/Hcf106 family HVZ88_23365 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HVZ88_23365 PF04055 Radical SAM superfamily HVZ88_23370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_23370 PF03466 LysR substrate binding domain HVZ88_23375 PF03099 Biotin/lipoate A/B protein ligase family HVZ88_23380 PF04359 Protein of unknown function (DUF493) HVZ88_23385 PF00768 D-alanyl-D-alanine carboxypeptidase HVZ88_23385 PF07943 Penicillin-binding protein 5, C-terminal domain HVZ88_23390 PF05036 Sporulation related domain HVZ88_23390 PF03330 Lytic transglycolase HVZ88_23395 PF01098 Cell cycle protein HVZ88_23400 PF00905 Penicillin binding protein transpeptidase domain HVZ88_23400 PF03717 Penicillin-binding Protein dimerisation domain HVZ88_23405 PF02590 Predicted SPOUT methyltransferase HVZ88_23415 PF00300 Histidine phosphatase superfamily (branch 1) HVZ88_23420 PF01467 Cytidylyltransferase-like HVZ88_23425 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HVZ88_23425 PF06144 DNA polymerase III, delta subunit HVZ88_23430 PF04390 Lipopolysaccharide-assembly HVZ88_23435 PF08264 Anticodon-binding domain of tRNA HVZ88_23435 PF00133 tRNA synthetases class I (I, L, M and V) HVZ88_23435 PF13603 Leucyl-tRNA synthetase, Domain 2 HVZ88_23440 PF07295 Zinc-ribbon containing domain HVZ88_23445 PF08238 Sel1 repeat HVZ88_23450 PF06889 Protein of unknown function (DUF1266) HVZ88_23460 PF08238 Sel1 repeat HVZ88_23465 PF06889 Protein of unknown function (DUF1266) HVZ88_23475 PF00012 Hsp70 protein HVZ88_23480 PF01156 Inosine-uridine preferring nucleoside hydrolase HVZ88_23485 PF00005 ABC transporter HVZ88_23490 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_23495 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_23500 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_23505 PF00795 Carbon-nitrogen hydrolase HVZ88_23510 PF03471 Transporter associated domain HVZ88_23510 PF00571 CBS domain HVZ88_23515 PF02130 Uncharacterized protein family UPF0054 HVZ88_23520 PF02562 PhoH-like protein HVZ88_23525 PF04055 Radical SAM superfamily HVZ88_23525 PF01938 TRAM domain HVZ88_23525 PF00919 Uncharacterized protein family UPF0004 HVZ88_23530 PF01494 FAD binding domain HVZ88_23570 PF13537 Glutamine amidotransferase domain HVZ88_23570 PF00733 Asparagine synthase HVZ88_23575 PF13344 Haloacid dehalogenase-like hydrolase HVZ88_23580 PF00480 ROK family HVZ88_23580 PF01047 MarR family HVZ88_23585 PF01979 Amidohydrolase family HVZ88_23590 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HVZ88_23595 PF02378 Phosphotransferase system, EIIC HVZ88_23595 PF00367 phosphotransferase system, EIIB HVZ88_23595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HVZ88_23600 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVZ88_23600 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HVZ88_23605 PF03573 outer membrane porin, OprD family HVZ88_23610 PF13982 YbfN-like lipoprotein HVZ88_23615 PF01475 Ferric uptake regulator family HVZ88_23625 PF00258 Flavodoxin HVZ88_23630 PF01402 Ribbon-helix-helix protein, copG family HVZ88_23635 PF12697 Alpha/beta hydrolase family HVZ88_23640 PF17206 SeqA protein N-terminal domain HVZ88_23640 PF03925 SeqA protein C-terminal domain HVZ88_23645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVZ88_23645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVZ88_23645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVZ88_23645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVZ88_23655 PF10946 Protein of unknown function DUF2625 HVZ88_23665 PF13520 Amino acid permease HVZ88_23670 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVZ88_23670 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HVZ88_23670 PF01276 Orn/Lys/Arg decarboxylase, major domain HVZ88_23680 PF00072 Response regulator receiver domain HVZ88_23680 PF00486 Transcriptional regulatory protein, C terminal HVZ88_23685 PF13493 Domain of unknown function (DUF4118) HVZ88_23685 PF02702 Osmosensitive K+ channel His kinase sensor domain HVZ88_23685 PF13492 GAF domain HVZ88_23685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVZ88_23685 PF00512 His Kinase A (phospho-acceptor) domain HVZ88_23690 PF02669 K+-transporting ATPase, c chain HVZ88_23700 PF03814 Potassium-transporting ATPase A subunit HVZ88_23705 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) HVZ88_23710 PF10725 Protein of unknown function (DUF2517) HVZ88_23715 PF05593 RHS Repeat HVZ88_23715 PF03527 RHS protein HVZ88_23725 PF05593 RHS Repeat HVZ88_23725 PF03527 RHS protein HVZ88_23750 PF08349 Protein of unknown function (DUF1722) HVZ88_23755 PF03441 FAD binding domain of DNA photolyase HVZ88_23755 PF00875 DNA photolyase HVZ88_23760 PF00854 POT family HVZ88_23765 PF01784 NIF3 (NGG1p interacting factor 3) HVZ88_23770 PF02682 Carboxyltransferase domain, subdomain C and D HVZ88_23775 PF02626 Carboxyltransferase domain, subdomain A and B HVZ88_23780 PF03746 LamB/YcsF family HVZ88_23785 PF06827 Zinc finger found in FPG and IleRS HVZ88_23785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HVZ88_23785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HVZ88_23790 PF05145 Transition state regulatory protein AbrB HVZ88_23795 PF00419 Fimbrial protein HVZ88_23800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HVZ88_23800 PF02753 Pili assembly chaperone PapD, C-terminal domain HVZ88_23805 PF13953 PapC C-terminal domain HVZ88_23805 PF13954 PapC N-terminal domain HVZ88_23805 PF00577 Outer membrane usher protein HVZ88_23810 PF00419 Fimbrial protein HVZ88_23815 PF00285 Citrate synthase, C-terminal domain HVZ88_23825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HVZ88_23830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HVZ88_23835 PF00890 FAD binding domain HVZ88_23835 PF02910 Fumarate reductase flavoprotein C-term HVZ88_23840 PF13085 2Fe-2S iron-sulfur cluster binding domain HVZ88_23845 PF02779 Transketolase, pyrimidine binding domain HVZ88_23845 PF00676 Dehydrogenase E1 component HVZ88_23845 PF16078 2-oxoglutarate dehydrogenase N-terminus HVZ88_23845 PF16870 2-oxoglutarate dehydrogenase C-terminal HVZ88_23850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HVZ88_23850 PF00364 Biotin-requiring enzyme HVZ88_23850 PF02817 e3 binding domain HVZ88_23855 PF00549 CoA-ligase HVZ88_23855 PF08442 ATP-grasp domain HVZ88_23860 PF02629 CoA binding domain HVZ88_23860 PF00549 CoA-ligase HVZ88_23865 PF00392 Bacterial regulatory proteins, gntR family HVZ88_23865 PF07702 UTRA domain HVZ88_23870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HVZ88_23870 PF02378 Phosphotransferase system, EIIC HVZ88_23870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HVZ88_23875 PF07748 Glycosyl hydrolases family 38 C-terminal domain HVZ88_23875 PF09261 Alpha mannosidase middle domain HVZ88_23875 PF01074 Glycosyl hydrolases family 38 N-terminal domain HVZ88_23880 PF01654 Cytochrome bd terminal oxidase subunit I HVZ88_23885 PF02322 Cytochrome bd terminal oxidase subunit II HVZ88_23890 PF08173 Membrane bound YbgT-like protein HVZ88_23895 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HVZ88_23900 PF03061 Thioesterase superfamily HVZ88_23905 PF01618 MotA/TolQ/ExbB proton channel family HVZ88_23910 PF02472 Biopolymer transport protein ExbD/TolR HVZ88_23915 PF06519 TolA C-terminal HVZ88_23920 PF07676 WD40-like Beta Propeller Repeat HVZ88_23920 PF04052 TolB amino-terminal domain HVZ88_23925 PF00691 OmpA family HVZ88_23930 PF16331 TolA binding protein trimerisation HVZ88_23930 PF13174 Tetratricopeptide repeat HVZ88_23970 PF02445 Quinolinate synthetase A protein HVZ88_23975 PF04973 Nicotinamide mononucleotide transporter HVZ88_23980 PF01545 Cation efflux family HVZ88_23985 PF13985 YbgS-like protein HVZ88_23990 PF00793 DAHP synthetase I family HVZ88_23995 PF00300 Histidine phosphatase superfamily (branch 1) HVZ88_24000 PF01263 Aldose 1-epimerase HVZ88_24005 PF08544 GHMP kinases C terminal HVZ88_24005 PF00288 GHMP kinases N terminal domain HVZ88_24005 PF10509 Galactokinase galactose-binding signature HVZ88_24010 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HVZ88_24010 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HVZ88_24015 PF16363 GDP-mannose 4,6 dehydratase HVZ88_24020 PF00005 ABC transporter HVZ88_24025 PF03459 TOBE domain HVZ88_24025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_24030 PF10766 Multidrug efflux pump-associated protein AcrZ HVZ88_24040 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24045 PF00005 ABC transporter HVZ88_24045 PF03459 TOBE domain HVZ88_24055 PF10282 Lactonase, 7-bladed beta-propeller HVZ88_24060 PF03466 LysR substrate binding domain HVZ88_24060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_24065 PF04303 PrpF protein HVZ88_24070 PF00939 Sodium:sulfate symporter transmembrane region HVZ88_24075 PF00330 Aconitase family (aconitate hydratase) HVZ88_24075 PF00694 Aconitase C-terminal domain HVZ88_24080 PF01095 Pectinesterase HVZ88_24085 PF01161 Phosphatidylethanolamine-binding protein HVZ88_24090 PF00202 Aminotransferase class-III HVZ88_24095 PF06968 Biotin and Thiamin Synthesis associated domain HVZ88_24095 PF04055 Radical SAM superfamily HVZ88_24100 PF00155 Aminotransferase class I and II HVZ88_24105 PF08241 Methyltransferase domain HVZ88_24115 PF17757 UvrB interaction domain HVZ88_24115 PF00271 Helicase conserved C-terminal domain HVZ88_24115 PF12344 Ultra-violet resistance protein B HVZ88_24115 PF04851 Type III restriction enzyme, res subunit HVZ88_24115 PF02151 UvrB/uvrC motif HVZ88_24120 PF01933 Uncharacterised protein family UPF0052 HVZ88_24125 PF04055 Radical SAM superfamily HVZ88_24125 PF06463 Molybdenum Cofactor Synthesis C HVZ88_24130 PF00994 Probable molybdopterin binding domain HVZ88_24135 PF01967 MoaC family HVZ88_24140 PF02597 ThiS family HVZ88_24145 PF02391 MoaE protein HVZ88_24150 PF01027 Inhibitor of apoptosis-promoting Bax1 HVZ88_24155 PF01027 Inhibitor of apoptosis-promoting Bax1 HVZ88_24160 PF03706 Lysylphosphatidylglycerol synthase TM region HVZ88_24165 PF13091 PLD-like domain HVZ88_24170 PF03372 Endonuclease/Exonuclease/phosphatase family HVZ88_24175 PF11076 Putative inner membrane protein YbhQ HVZ88_24190 PF00005 ABC transporter HVZ88_24195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_24200 PF00440 Bacterial regulatory proteins, tetR family HVZ88_24200 PF09209 Tetracyclin repressor-like, C-terminal domain HVZ88_24205 PF00270 DEAD/DEAH box helicase HVZ88_24205 PF00271 Helicase conserved C-terminal domain HVZ88_24210 PF08719 Domain of unknown function (DUF1768) HVZ88_24215 PF13307 Helicase C-terminal domain HVZ88_24215 PF06733 DEAD_2 HVZ88_24215 PF00270 DEAD/DEAH box helicase HVZ88_24220 PF02885 Glycosyl transferase family, helical bundle domain HVZ88_24225 PF02615 Malate/L-lactate dehydrogenase HVZ88_24230 PF07338 Protein of unknown function (DUF1471) HVZ88_24235 PF01258 Prokaryotic dksA/traR C4-type zinc finger HVZ88_24240 PF13640 2OG-Fe(II) oxygenase superfamily HVZ88_24240 PF18331 PKHD-type hydroxylase C-terminal domain HVZ88_24245 PF07715 TonB-dependent Receptor Plug Domain HVZ88_24245 PF00593 TonB dependent receptor HVZ88_24250 PF07338 Protein of unknown function (DUF1471) HVZ88_24255 PF05971 RNA methyltransferase HVZ88_24260 PF00924 Mechanosensitive ion channel HVZ88_24265 PF00005 ABC transporter HVZ88_24270 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24275 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_24280 PF00210 Ferritin-like domain HVZ88_24285 PF00892 EamA-like transporter family HVZ88_24295 PF13505 Outer membrane protein beta-barrel domain HVZ88_24300 PF00884 Sulfatase HVZ88_24310 PF02742 Iron dependent repressor, metal binding and dimerisation domain HVZ88_24310 PF01325 Iron dependent repressor, N-terminal DNA binding domain HVZ88_24315 PF03600 Citrate transporter HVZ88_24320 PF03734 L,D-transpeptidase catalytic domain HVZ88_24320 PF17969 L,D-transpeptidase C-terminal domain HVZ88_24325 PF12848 ABC transporter HVZ88_24325 PF00005 ABC transporter HVZ88_24330 PF07350 Protein of unknown function (DUF1479) HVZ88_24340 PF02901 Pyruvate formate lyase-like HVZ88_24340 PF01228 Glycine radical HVZ88_24345 PF04055 Radical SAM superfamily HVZ88_24350 PF00923 Transaldolase/Fructose-6-phosphate aldolase HVZ88_24355 PF00899 ThiF family HVZ88_24360 PF00994 Probable molybdopterin binding domain HVZ88_24360 PF03454 MoeA C-terminal region (domain IV) HVZ88_24360 PF03453 MoeA N-terminal region (domain I and II) HVZ88_24365 PF01112 Asparaginase HVZ88_24370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVZ88_24370 PF00005 ABC transporter HVZ88_24375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVZ88_24380 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24385 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24385 PF12911 N-terminal TM domain of oligopeptide transport permease C HVZ88_24390 PF00563 EAL domain HVZ88_24390 PF17153 Periplasmic sensor domain, extracellular HVZ88_24395 PF00990 Diguanylate cyclase, GGDEF domain HVZ88_24395 PF17156 Gammaproteobacterial periplasmic sensor domain HVZ88_24400 PF04055 Radical SAM superfamily HVZ88_24400 PF18693 TRAM domain HVZ88_24400 PF00919 Uncharacterized protein family UPF0004 HVZ88_24405 PF10799 Biofilm formation protein (YliH/bssR) HVZ88_24410 PF07995 Glucose / Sorbosone dehydrogenase HVZ88_24415 PF00043 Glutathione S-transferase, C-terminal domain HVZ88_24415 PF13417 Glutathione S-transferase, N-terminal domain HVZ88_24420 PF00768 D-alanyl-D-alanine carboxypeptidase HVZ88_24420 PF07943 Penicillin-binding protein 5, C-terminal domain HVZ88_24425 PF08220 DeoR-like helix-turn-helix domain HVZ88_24425 PF00455 DeoR C terminal sensor domain HVZ88_24430 PF01569 PAP2 superfamily HVZ88_24435 PF07690 Major Facilitator Superfamily HVZ88_24450 PF07690 Major Facilitator Superfamily HVZ88_24455 PF00440 Bacterial regulatory proteins, tetR family HVZ88_24460 PF06826 Predicted Permease Membrane Region HVZ88_24460 PF02080 TrkA-C domain HVZ88_24465 PF11045 Putative inner membrane protein of Enterobacteriaceae HVZ88_24470 PF00462 Glutaredoxin HVZ88_24475 PF07214 Protein of unknown function (DUF1418) HVZ88_24480 PF00881 Nitroreductase family HVZ88_24485 PF18030 RimK PreATP-grasp domain HVZ88_24485 PF08443 RimK-like ATP-grasp domain HVZ88_24490 PF10722 Putative bacterial sensory transduction regulator HVZ88_24495 PF13416 Bacterial extracellular solute-binding protein HVZ88_24500 PF08402 TOBE domain HVZ88_24500 PF00005 ABC transporter HVZ88_24505 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24510 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24515 PF10767 Protein of unknown function (DUF2593) HVZ88_24520 PF05958 tRNA (Uracil-5-)-methyltransferase HVZ88_24525 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_24530 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24535 PF00528 Binding-protein-dependent transport system inner membrane component HVZ88_24540 PF00497 Bacterial extracellular solute-binding proteins, family 3 HVZ88_24545 PF00005 ABC transporter HVZ88_24550 PF12883 Protein of unknown function (DUF3828) HVZ88_24555 PF01906 Putative heavy-metal-binding HVZ88_24560 PF01510 N-acetylmuramoyl-L-alanine amidase HVZ88_24565 PF01370 NAD dependent epimerase/dehydratase family HVZ88_24570 PF11066 Protein of unknown function (DUF2867) HVZ88_24570 PF13460 NAD(P)H-binding HVZ88_24575 PF01212 Beta-eliminating lyase HVZ88_24580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVZ88_24580 PF00205 Thiamine pyrophosphate enzyme, central domain HVZ88_24580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVZ88_24585 PF00970 Oxidoreductase FAD-binding domain HVZ88_24585 PF00111 2Fe-2S iron-sulfur cluster binding domain HVZ88_24585 PF00175 Oxidoreductase NAD-binding domain HVZ88_24590 PF03063 Prismane/CO dehydrogenase family HVZ88_24595 PF03956 Lysine exporter LysO HVZ88_24605 PF11398 Protein of unknown function (DUF2813) HVZ88_24610 PF04393 Protein of unknown function (DUF535) HVZ88_24615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HVZ88_24620 PF12704 MacB-like periplasmic core domain HVZ88_24620 PF02687 FtsX-like permease family HVZ88_24620 PF00005 ABC transporter HVZ88_24625 PF00313 'Cold-shock' DNA-binding domain HVZ88_24630 PF02617 ATP-dependent Clp protease adaptor protein ClpS HVZ88_24635 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_24635 PF07724 AAA domain (Cdc48 subfamily) HVZ88_24635 PF02861 Clp amino terminal domain, pathogenicity island component HVZ88_24635 PF10431 C-terminal, D2-small domain, of ClpB protein HVZ88_24635 PF17871 AAA lid domain HVZ88_24645 PF01176 Translation initiation factor 1A / IF-1 HVZ88_24650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HVZ88_24655 PF00005 ABC transporter HVZ88_24655 PF00664 ABC transporter transmembrane region HVZ88_24660 PF00005 ABC transporter HVZ88_24660 PF00664 ABC transporter transmembrane region HVZ88_24665 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVZ88_24670 PF01037 Lrp/AsnC ligand binding domain HVZ88_24675 PF01580 FtsK/SpoIIIE family HVZ88_24675 PF09397 Ftsk gamma domain HVZ88_24675 PF17854 FtsK alpha domain HVZ88_24675 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HVZ88_24680 PF03548 Outer membrane lipoprotein carrier protein LolA HVZ88_24685 PF16193 AAA C-terminal domain HVZ88_24685 PF12002 MgsA AAA+ ATPase C terminal HVZ88_24685 PF00004 ATPase family associated with various cellular activities (AAA) HVZ88_24690 PF02403 Seryl-tRNA synthetase N-terminal domain HVZ88_24690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVZ88_24695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HVZ88_24695 PF00384 Molybdopterin oxidoreductase HVZ88_24695 PF01568 Molydopterin dinucleotide binding domain HVZ88_24700 PF12800 4Fe-4S binding domain HVZ88_24700 PF13247 4Fe-4S dicluster domain HVZ88_24705 PF04976 DMSO reductase anchor subunit (DmsC) HVZ88_24710 PF00857 Isochorismatase family HVZ88_24715 PF07690 Major Facilitator Superfamily HVZ88_24720 PF13520 Amino acid permease HVZ88_24725 PF03466 LysR substrate binding domain HVZ88_24725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVZ88_24730 PF02525 Flavodoxin-like fold HVZ88_24735 PF04055 Radical SAM superfamily HVZ88_24740 PF00589 Phage integrase family HVZ88_24740 PF02899 Phage integrase, N-terminal SAM-like domain HVZ88_24780 PF02387 IncFII RepA protein family HVZ88_24805 PF00872 Transposase, Mutator family HVZ88_24815 PF06406 StbA protein HVZ88_24830 PF01555 DNA methylase HVZ88_24840 PF07128 Protein of unknown function (DUF1380) HVZ88_24845 PF03230 Antirestriction protein HVZ88_24880 PF03432 Relaxase/Mobilisation nuclease domain HVZ88_24925 PF01381 Helix-turn-helix HVZ88_24930 PF05321 Haemolysin expression modulating protein HVZ88_24955 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HVZ88_25025 PF13362 Toprim domain HVZ88_25025 PF08401 Domain of unknown function (DUF1738) HVZ88_25025 PF18818 Metallopeptidase superfamily domain HVZ88_25035 PF00437 Type II/IV secretion system protein HVZ88_25050 PF01464 Transglycosylase SLT domain HVZ88_25080 PF02387 IncFII RepA protein family HVZ88_25105 PF06406 StbA protein HVZ88_25160 PF03432 Relaxase/Mobilisation nuclease domain HVZ88_25170 PF12728 Helix-turn-helix domain HVZ88_25190 PF01850 PIN domain HVZ88_25195 PF06316 Enterobacterial Ail/Lom protein HVZ88_25235 PF01381 Helix-turn-helix HVZ88_25240 PF05321 Haemolysin expression modulating protein HVZ88_25325 PF18818 Metallopeptidase superfamily domain HVZ88_25325 PF13362 Toprim domain HVZ88_25325 PF08401 Domain of unknown function (DUF1738) HVZ88_25335 PF00437 Type II/IV secretion system protein HVZ88_25350 PF01464 Transglycosylase SLT domain HVZ88_25505 PF01815 Rop protein