locus-tag class description JNN61_00095 PF06316 Enterobacterial Ail/Lom protein JNN61_00100 PF08400 Prophage tail fibre N-terminal JNN61_00100 PF03335 Phage tail fibre repeat JNN61_00100 PF07484 Phage Tail Collar Domain JNN61_00105 PF02413 Caudovirales tail fibre assembly protein, lambda gpK JNN61_00110 PF08242 Methyltransferase domain JNN61_00115 PF02413 Caudovirales tail fibre assembly protein, lambda gpK JNN61_00130 PF05974 Domain of unknown function (DUF892) JNN61_00135 PF05974 Domain of unknown function (DUF892) JNN61_00140 PF10685 Stress-induced bacterial acidophilic repeat motif JNN61_00145 PF00290 Tryptophan synthase alpha chain JNN61_00150 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_00155 PF00218 Indole-3-glycerol phosphate synthase JNN61_00155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JNN61_00160 PF00117 Glutamine amidotransferase class-I JNN61_00160 PF02885 Glycosyl transferase family, helical bundle domain JNN61_00160 PF00591 Glycosyl transferase family, a/b domain JNN61_00165 PF00425 chorismate binding enzyme JNN61_00165 PF04715 Anthranilate synthase component I, N terminal region JNN61_00170 PF08255 Trp-operon Leader Peptide JNN61_00175 PF02811 PHP domain JNN61_00180 PF01300 Telomere recombination JNN61_00185 PF09972 Predicted membrane protein (DUF2207) JNN61_00190 PF01479 S4 domain JNN61_00190 PF00849 RNA pseudouridylate synthase JNN61_00205 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JNN61_00205 PF12557 Cob(I)alamin adenosyltransferase N terminal JNN61_00210 PF00106 short chain dehydrogenase JNN61_00215 PF08496 Peptidase family S49 N-terminal JNN61_00215 PF01343 Peptidase family S49 JNN61_00220 PF10692 Protein of unknown function (DUF2498) JNN61_00225 PF01751 Toprim domain JNN61_00225 PF01396 Topoisomerase DNA binding C4 zinc finger JNN61_00225 PF08272 Topoisomerase I zinc-ribbon-like JNN61_00225 PF01131 DNA topoisomerase JNN61_00230 PF03466 LysR substrate binding domain JNN61_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_00250 PF00330 Aconitase family (aconitate hydratase) JNN61_00250 PF00694 Aconitase C-terminal domain JNN61_00255 PF00925 GTP cyclohydrolase II JNN61_00260 PF01569 PAP2 superfamily JNN61_00265 PF06305 Lipopolysaccharide assembly protein A domain JNN61_00270 PF18073 Rubredoxin metal binding domain JNN61_00275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JNN61_00280 PF01253 Translation initiation factor SUI1 JNN61_00285 PF05433 Glycine zipper 2TM domain JNN61_00290 PF00455 DeoR C terminal sensor domain JNN61_00290 PF08220 DeoR-like helix-turn-helix domain JNN61_00300 PF00563 EAL domain JNN61_00300 PF00990 Diguanylate cyclase, GGDEF domain JNN61_00300 PF13426 PAS domain JNN61_00310 PF17876 Cold shock domain JNN61_00310 PF08206 Ribonuclease B OB domain JNN61_00310 PF00773 RNB domain JNN61_00310 PF00575 S1 RNA binding domain JNN61_00325 PF16295 Tetracyclin repressor-like, C-terminal domain JNN61_00325 PF00440 Bacterial regulatory proteins, tetR family JNN61_00330 PF00529 HlyD membrane-fusion protein of T1SS JNN61_00330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_00335 PF00873 AcrB/AcrD/AcrF family JNN61_00340 PF02321 Outer membrane efflux protein JNN61_00345 PF07690 Major Facilitator Superfamily JNN61_00350 PF00005 ABC transporter JNN61_00355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_00355 PF00005 ABC transporter JNN61_00360 PF12911 N-terminal TM domain of oligopeptide transport permease C JNN61_00360 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_00365 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_00370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_00375 PF10820 Protein of unknown function (DUF2543) JNN61_00380 PF00324 Amino acid permease JNN61_00390 PF00120 Glutamine synthetase, catalytic domain JNN61_00395 PF07722 Peptidase C26 JNN61_00400 PF01381 Helix-turn-helix JNN61_00400 PF07883 Cupin domain JNN61_00405 PF00171 Aldehyde dehydrogenase family JNN61_00410 PF01266 FAD dependent oxidoreductase JNN61_00415 PF00202 Aminotransferase class-III JNN61_00420 PF00158 Sigma-54 interaction domain JNN61_00420 PF02954 Bacterial regulatory protein, Fis family JNN61_00425 PF04012 PspA/IM30 family JNN61_00430 PF06667 Phage shock protein B JNN61_00435 PF04024 PspC domain JNN61_00440 PF09584 Phage shock protein PspD (Phageshock_PspD) JNN61_00445 PF00581 Rhodanese-like domain JNN61_00450 PF04317 YcjX-like family, DUF463 JNN61_00455 PF05128 Domain of unknown function (DUF697) JNN61_00460 PF00158 Sigma-54 interaction domain JNN61_00460 PF13188 PAS domain JNN61_00460 PF18024 Helix-turn-helix domain JNN61_00465 PF08534 Redoxin JNN61_00470 PF13378 Enolase C-terminal domain-like JNN61_00470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNN61_00475 PF00246 Zinc carboxypeptidase JNN61_00485 PF12146 Serine aminopeptidase, S33 JNN61_00490 PF03466 LysR substrate binding domain JNN61_00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_00495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_00500 PF00924 Mechanosensitive ion channel JNN61_00505 PF10749 Protein of unknown function (DUF2534) JNN61_00510 PF00582 Universal stress protein family JNN61_00515 PF00325 Bacterial regulatory proteins, crp family JNN61_00515 PF00027 Cyclic nucleotide-binding domain JNN61_00520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JNN61_00520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JNN61_00525 PF03806 AbgT putative transporter family JNN61_00530 PF01546 Peptidase family M20/M25/M40 JNN61_00535 PF01546 Peptidase family M20/M25/M40 JNN61_00535 PF07687 Peptidase dimerisation domain JNN61_00540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_00540 PF03466 LysR substrate binding domain JNN61_00545 PF02311 AraC-like ligand binding domain JNN61_00545 PF12833 Helix-turn-helix domain JNN61_00550 PF13533 Biotin-lipoyl like JNN61_00555 PF07690 Major Facilitator Superfamily JNN61_00560 PF01713 Smr domain JNN61_00565 PF00990 Diguanylate cyclase, GGDEF domain JNN61_00565 PF08448 PAS fold JNN61_00570 PF01544 CorA-like Mg2+ transporter protein JNN61_00575 PF00270 DEAD/DEAH box helicase JNN61_00575 PF03880 DbpA RNA binding domain JNN61_00575 PF00271 Helicase conserved C-terminal domain JNN61_00580 PF01171 PP-loop family JNN61_00585 PF00589 Phage integrase family JNN61_00585 PF12167 Arm DNA-binding domain JNN61_00590 PF06806 Putative excisionase (DUF1233) JNN61_00595 PF06688 Protein of unknown function (DUF1187) JNN61_00605 PF03837 RecT family JNN61_00610 PF06630 Enterobacterial exodeoxyribonuclease VIII JNN61_00610 PF12684 PDDEXK-like domain of unknown function (DUF3799) JNN61_00620 PF04181 Rtr1/RPAP2 family JNN61_00630 PF07151 Protein of unknown function (DUF1391) JNN61_00640 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT JNN61_00645 PF06254 Putative bacterial toxin ydaT JNN61_00655 PF01695 IstB-like ATP binding protein JNN61_00660 PF07789 Protein of unknown function (DUF1627) JNN61_00670 PF01434 Peptidase family M41 JNN61_00670 PF06480 FtsH Extracellular JNN61_00670 PF17862 AAA+ lid domain JNN61_00670 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_00685 PF07102 Protein of unknown function (DUF1364) JNN61_00705 PF04971 Bacteriophage P21 holin S JNN61_00710 PF00959 Phage lysozyme JNN61_00715 PF06085 Lipoprotein Rz1 precursor JNN61_00725 PF02195 ParB-like nuclease domain JNN61_00805 PF06791 Prophage tail length tape measure protein JNN61_00840 PF06316 Enterobacterial Ail/Lom protein JNN61_00845 PF07484 Phage Tail Collar Domain JNN61_00845 PF03335 Phage tail fibre repeat JNN61_00845 PF08400 Prophage tail fibre N-terminal JNN61_00870 PF00950 ABC 3 transport family JNN61_00875 PF00950 ABC 3 transport family JNN61_00880 PF00005 ABC transporter JNN61_00885 PF01297 Zinc-uptake complex component A periplasmic JNN61_00890 PF00582 Universal stress protein family JNN61_00895 PF00267 Gram-negative porin JNN61_00900 PF10371 Domain of unknown function JNN61_00900 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JNN61_00900 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JNN61_00900 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JNN61_00900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_00905 PF03891 Domain of unknown function (DUF333) JNN61_00910 PF03724 META domain JNN61_00915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNN61_00915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNN61_00920 PF11739 Dicarboxylate transport JNN61_00925 PF13617 YnbE-like lipoprotein JNN61_00930 PF07027 Protein of unknown function (DUF1318) JNN61_00935 PF14525 AraC-binding-like domain JNN61_00935 PF12833 Helix-turn-helix domain JNN61_00940 PF00171 Aldehyde dehydrogenase family JNN61_00945 PF02728 Copper amine oxidase, N3 domain JNN61_00945 PF02727 Copper amine oxidase, N2 domain JNN61_00945 PF07833 Copper amine oxidase N-terminal domain JNN61_00945 PF01179 Copper amine oxidase, enzyme domain JNN61_00950 PF00171 Aldehyde dehydrogenase family JNN61_00950 PF01575 MaoC like domain JNN61_00955 PF05138 Phenylacetic acid catabolic protein JNN61_00960 PF06243 Phenylacetic acid degradation B JNN61_00965 PF05138 Phenylacetic acid catabolic protein JNN61_00970 PF01883 Iron-sulfur cluster assembly protein JNN61_00975 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_00975 PF00175 Oxidoreductase NAD-binding domain JNN61_00975 PF00970 Oxidoreductase FAD-binding domain JNN61_00980 PF00378 Enoyl-CoA hydratase/isomerase JNN61_00985 PF00378 Enoyl-CoA hydratase/isomerase JNN61_00990 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JNN61_00990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JNN61_00990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JNN61_00995 PF03061 Thioesterase superfamily JNN61_01000 PF02803 Thiolase, C-terminal domain JNN61_01000 PF00108 Thiolase, N-terminal domain JNN61_01005 PF14535 AMP-binding enzyme C-terminal domain JNN61_01005 PF00501 AMP-binding enzyme JNN61_01010 PF07848 PaaX-like protein JNN61_01010 PF08223 PaaX-like protein C-terminal domain JNN61_01015 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_01025 PF00248 Aldo/keto reductase family JNN61_01030 PF02525 Flavodoxin-like fold JNN61_01035 PF11898 Domain of unknown function (DUF3418) JNN61_01035 PF00271 Helicase conserved C-terminal domain JNN61_01035 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JNN61_01035 PF00270 DEAD/DEAH box helicase JNN61_01035 PF04408 Helicase associated domain (HA2) JNN61_01055 PF02698 DUF218 domain JNN61_01060 PF00171 Aldehyde dehydrogenase family JNN61_01065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JNN61_01065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JNN61_01070 PF01292 Prokaryotic cytochrome b561 JNN61_01080 PF01848 Hok/gef family JNN61_01090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNN61_01090 PF02203 Tar ligand binding domain homologue JNN61_01090 PF00672 HAMP domain JNN61_01095 PF03466 LysR substrate binding domain JNN61_01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_01100 PF07063 Domain of unknown function (DUF1338) JNN61_01105 PF04349 Periplasmic glucan biosynthesis protein, MdoG JNN61_01110 PF04325 Protein of unknown function (DUF465) JNN61_01115 PF13302 Acetyltransferase (GNAT) domain JNN61_01120 PF18836 Beta solenoid repeat from YDCK JNN61_01125 PF03595 Voltage-dependent anion channel JNN61_01130 PF03848 Tellurite resistance protein TehB JNN61_01135 PF11769 Protein of unknown function (DUF3313) JNN61_01140 PF03594 Benzoate membrane transport protein JNN61_01145 PF07883 Cupin domain JNN61_01145 PF01381 Helix-turn-helix JNN61_01150 PF01136 Peptidase family U32 JNN61_01150 PF12392 Collagenase JNN61_01155 PF10829 Protein of unknown function (DUF2554) JNN61_01160 PF07927 HicA toxin of bacterial toxin-antitoxin, JNN61_01165 PF01381 Helix-turn-helix JNN61_01165 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JNN61_01170 PF00155 Aminotransferase class I and II JNN61_01170 PF00392 Bacterial regulatory proteins, gntR family JNN61_01175 PF13416 Bacterial extracellular solute-binding protein JNN61_01180 PF00005 ABC transporter JNN61_01180 PF08402 TOBE domain JNN61_01185 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_01190 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_01195 PF00171 Aldehyde dehydrogenase family JNN61_01205 PF10753 Toxin GhoT_OrtT JNN61_01210 PF10735 Protein of unknown function (DUF2526) JNN61_01215 PF04657 Putative inner membrane exporter, YdcZ JNN61_01220 PF00583 Acetyltransferase (GNAT) family JNN61_01225 PF16884 N-terminal domain of oxidoreductase JNN61_01225 PF00107 Zinc-binding dehydrogenase JNN61_01230 PF00392 Bacterial regulatory proteins, gntR family JNN61_01230 PF07729 FCD domain JNN61_01235 PF01797 Transposase IS200 like JNN61_01240 PF07715 TonB-dependent Receptor Plug Domain JNN61_01240 PF00593 TonB dependent receptor JNN61_01250 PF00324 Amino acid permease JNN61_01265 PF03527 RHS protein JNN61_01265 PF05593 RHS Repeat JNN61_01265 PF14220 Domain of unknown function (DUF4329) JNN61_01280 PF00360 Phytochrome region JNN61_01280 PF01590 GAF domain JNN61_01280 PF00563 EAL domain JNN61_01280 PF00990 Diguanylate cyclase, GGDEF domain JNN61_01285 PF14864 Alkyl sulfatase C-terminal JNN61_01285 PF14863 Alkyl sulfatase dimerisation JNN61_01285 PF00753 Metallo-beta-lactamase superfamily JNN61_01290 PF01361 Tautomerase enzyme JNN61_01295 PF01613 Flavin reductase like domain JNN61_01300 PF00797 N-acetyltransferase JNN61_01305 PF02567 Phenazine biosynthesis-like protein JNN61_01310 PF02665 Nitrate reductase gamma subunit JNN61_01315 PF02613 Nitrate reductase delta subunit JNN61_01320 PF13247 4Fe-4S dicluster domain JNN61_01320 PF14711 Respiratory nitrate reductase beta C-terminal JNN61_01325 PF01568 Molydopterin dinucleotide binding domain JNN61_01325 PF00384 Molybdopterin oxidoreductase JNN61_01325 PF14710 Respiratory nitrate reductase alpha N-terminal JNN61_01330 PF07690 Major Facilitator Superfamily JNN61_01345 PF00267 Gram-negative porin JNN61_01350 PF00892 EamA-like transporter family JNN61_01360 PF13247 4Fe-4S dicluster domain JNN61_01360 PF12800 4Fe-4S binding domain JNN61_01360 PF09163 Formate dehydrogenase N, transmembrane JNN61_01365 PF01292 Prokaryotic cytochrome b561 JNN61_01370 PF01797 Transposase IS200 like JNN61_01375 PF01381 Helix-turn-helix JNN61_01380 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_01380 PF00107 Zinc-binding dehydrogenase JNN61_01385 PF03949 Malic enzyme, NAD binding domain JNN61_01385 PF00390 Malic enzyme, N-terminal domain JNN61_01390 PF08136 30S ribosomal protein subunit S22 family JNN61_01395 PF10684 Putative biofilm-dependent modulation protein JNN61_01400 PF02566 OsmC-like protein JNN61_01405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_01405 PF00005 ABC transporter JNN61_01410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_01410 PF00005 ABC transporter JNN61_01415 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_01415 PF12911 N-terminal TM domain of oligopeptide transport permease C JNN61_01420 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_01425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_01430 PF01427 D-ala-D-ala dipeptidase JNN61_01435 PF00990 Diguanylate cyclase, GGDEF domain JNN61_01435 PF00563 EAL domain JNN61_01435 PF13426 PAS domain JNN61_01440 PF00990 Diguanylate cyclase, GGDEF domain JNN61_01450 PF02638 Glycosyl hydrolase-like 10 JNN61_01455 PF13520 Amino acid permease JNN61_01460 PF00282 Pyridoxal-dependent decarboxylase conserved domain JNN61_01465 PF05193 Peptidase M16 inactive domain JNN61_01465 PF00675 Insulinase (Peptidase family M16) JNN61_01470 PF07715 TonB-dependent Receptor Plug Domain JNN61_01475 PF06472 ABC transporter transmembrane region 2 JNN61_01475 PF00005 ABC transporter JNN61_01485 PF13186 Iron-sulfur cluster-binding domain JNN61_01485 PF04055 Radical SAM superfamily JNN61_01490 PF00884 Sulfatase JNN61_01495 PF12833 Helix-turn-helix domain JNN61_01500 PF17073 Two-component-system connector protein JNN61_01505 PF00384 Molybdopterin oxidoreductase JNN61_01510 PF09160 FimH, mannose binding JNN61_01515 PF00419 Fimbrial protein JNN61_01520 PF00419 Fimbrial protein JNN61_01525 PF13953 PapC C-terminal domain JNN61_01525 PF00577 Outer membrane usher protein JNN61_01525 PF13954 PapC N-terminal domain JNN61_01530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_01530 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_01535 PF00419 Fimbrial protein JNN61_01555 PF00248 Aldo/keto reductase family JNN61_01570 PF00248 Aldo/keto reductase family JNN61_01585 PF03466 LysR substrate binding domain JNN61_01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_01600 PF07804 HipA-like C-terminal domain JNN61_01600 PF13657 HipA N-terminal domain JNN61_01605 PF01381 Helix-turn-helix JNN61_01610 PF03797 Autotransporter beta-domain JNN61_01620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_01620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_01625 PF04198 Putative sugar-binding domain JNN61_01630 PF00005 ABC transporter JNN61_01635 PF02653 Branched-chain amino acid transport system / permease component JNN61_01640 PF02653 Branched-chain amino acid transport system / permease component JNN61_01645 PF13407 Periplasmic binding protein domain JNN61_01650 PF01791 DeoC/LacD family aldolase JNN61_01655 PF03992 Antibiotic biosynthesis monooxygenase JNN61_01660 PF13649 Methyltransferase domain JNN61_01665 PF01062 Bestrophin, RFP-TM, chloride channel JNN61_01670 PF01232 Mannitol dehydrogenase Rossmann domain JNN61_01670 PF08125 Mannitol dehydrogenase C-terminal domain JNN61_01675 PF00990 Diguanylate cyclase, GGDEF domain JNN61_01680 PF13811 Domain of unknown function (DUF4186) JNN61_01685 PF04960 Glutaminase JNN61_01690 PF00171 Aldehyde dehydrogenase family JNN61_01695 PF03466 LysR substrate binding domain JNN61_01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_01705 PF07690 Major Facilitator Superfamily JNN61_01710 PF01914 MarC family integral membrane protein JNN61_01715 PF01047 MarR family JNN61_01720 PF12833 Helix-turn-helix domain JNN61_01725 PF13999 MarB protein JNN61_01730 PF00232 Glycosyl hydrolase family 1 JNN61_01735 PF11471 Maltoporin periplasmic N-terminal extension JNN61_01735 PF02264 LamB porin JNN61_01740 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JNN61_01745 PF02378 Phosphotransferase system, EIIC JNN61_01750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_01755 PF00392 Bacterial regulatory proteins, gntR family JNN61_01755 PF07702 UTRA domain JNN61_01760 PF00892 EamA-like transporter family JNN61_01765 PF07690 Major Facilitator Superfamily JNN61_01775 PF00990 Diguanylate cyclase, GGDEF domain JNN61_01780 PF04076 Bacterial OB fold (BOF) protein JNN61_01785 PF01432 Peptidase family M3 JNN61_01790 PF00106 short chain dehydrogenase JNN61_01795 PF07729 FCD domain JNN61_01795 PF00392 Bacterial regulatory proteins, gntR family JNN61_01800 PF14001 YdfZ protein JNN61_01805 PF08125 Mannitol dehydrogenase C-terminal domain JNN61_01805 PF01232 Mannitol dehydrogenase Rossmann domain JNN61_01810 PF07690 Major Facilitator Superfamily JNN61_01810 PF00083 Sugar (and other) transporter JNN61_01815 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_01815 PF00107 Zinc-binding dehydrogenase JNN61_01820 PF13378 Enolase C-terminal domain-like JNN61_01820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNN61_01825 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JNN61_01830 PF06932 Protein of unknown function (DUF1283) JNN61_01835 PF13302 Acetyltransferase (GNAT) domain JNN61_01840 PF06788 Uncharacterised protein family (UPF0257) JNN61_01845 PF06649 Protein of unknown function (DUF1161) JNN61_01850 PF01568 Molydopterin dinucleotide binding domain JNN61_01850 PF00384 Molybdopterin oxidoreductase JNN61_01850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNN61_01855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNN61_01855 PF00384 Molybdopterin oxidoreductase JNN61_01855 PF01568 Molydopterin dinucleotide binding domain JNN61_01860 PF12800 4Fe-4S binding domain JNN61_01860 PF13247 4Fe-4S dicluster domain JNN61_01865 PF04976 DMSO reductase anchor subunit (DmsC) JNN61_01870 PF02613 Nitrate reductase delta subunit JNN61_01875 PF00654 Voltage gated chloride channel JNN61_01885 PF00480 ROK family JNN61_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_01890 PF03466 LysR substrate binding domain JNN61_01895 PF07690 Major Facilitator Superfamily JNN61_01910 PF00089 Trypsin JNN61_01915 PF00893 Small Multidrug Resistance protein JNN61_01920 PF00893 Small Multidrug Resistance protein JNN61_01925 PF01594 AI-2E family transporter JNN61_01930 PF02233 NAD(P) transhydrogenase beta subunit JNN61_01935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JNN61_01935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JNN61_01935 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JNN61_01940 PF07338 Protein of unknown function (DUF1471) JNN61_01945 PF13520 Amino acid permease JNN61_01955 PF06942 GlpM protein JNN61_01960 PF00072 Response regulator receiver domain JNN61_01960 PF00486 Transcriptional regulatory protein, C terminal JNN61_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_01965 PF00672 HAMP domain JNN61_01965 PF00512 His Kinase A (phospho-acceptor) domain JNN61_01970 PF05472 DNA replication terminus site-binding protein (Ter protein) JNN61_01975 PF10415 Fumarase C C-terminus JNN61_01975 PF00206 Lyase JNN61_01980 PF05681 Fumarate hydratase (Fumerase) JNN61_01980 PF05683 Fumarase C-terminus JNN61_01985 PF01238 Phosphomannose isomerase type I JNN61_01990 PF06097 Bacterial protein of unknown function (DUF945) JNN61_01995 PF03573 outer membrane porin, OprD family JNN61_02005 PF00703 Glycosyl hydrolases family 2 JNN61_02005 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JNN61_02005 PF02837 Glycosyl hydrolases family 2, sugar binding domain JNN61_02010 PF00440 Bacterial regulatory proteins, tetR family JNN61_02020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNN61_02020 PF00356 Bacterial regulatory proteins, lacI family JNN61_02025 PF00367 phosphotransferase system, EIIB JNN61_02025 PF02378 Phosphotransferase system, EIIC JNN61_02030 PF00155 Aminotransferase class I and II JNN61_02035 PF00962 Adenosine/AMP deaminase JNN61_02040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNN61_02040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNN61_02050 PF05321 Haemolysin expression modulating protein JNN61_02055 PF10754 Protein of unknown function (DUF2569) JNN61_02060 PF02508 Rnf-Nqr subunit, membrane protein JNN61_02065 PF04060 Putative Fe-S cluster JNN61_02070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JNN61_02070 PF13375 RnfC Barrel sandwich hybrid domain JNN61_02070 PF10531 SLBB domain JNN61_02070 PF12838 4Fe-4S dicluster domain JNN61_02075 PF03116 NQR2, RnfD, RnfE family JNN61_02080 PF04205 FMN-binding domain JNN61_02085 PF02508 Rnf-Nqr subunit, membrane protein JNN61_02090 PF00633 Helix-hairpin-helix motif JNN61_02090 PF00730 HhH-GPD superfamily base excision DNA repair protein JNN61_02090 PF10576 Iron-sulfur binding domain of endonuclease III JNN61_02095 PF00854 POT family JNN61_02100 PF00043 Glutathione S-transferase, C-terminal domain JNN61_02100 PF02798 Glutathione S-transferase, N-terminal domain JNN61_02105 PF08543 Phosphomethylpyrimidine kinase JNN61_02110 PF01479 S4 domain JNN61_02110 PF00579 tRNA synthetases class I (W and Y) JNN61_02115 PF01243 Pyridoxamine 5'-phosphate oxidase JNN61_02115 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JNN61_02120 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme JNN61_02125 PF03702 Anhydro-N-acetylmuramic acid kinase JNN61_02130 PF05433 Glycine zipper 2TM domain JNN61_02135 PF01047 MarR family JNN61_02140 PF07869 Protein of unknown function (DUF1656) JNN61_02145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_02145 PF00529 HlyD membrane-fusion protein of T1SS JNN61_02150 PF04632 Fusaric acid resistance protein family JNN61_02155 PF00080 Copper/zinc superoxide dismutase (SODC) JNN61_02160 PF00248 Aldo/keto reductase family JNN61_02165 PF06945 Protein of unknown function (DUF1289) JNN61_02170 PF00440 Bacterial regulatory proteins, tetR family JNN61_02170 PF16925 Tetracyclin repressor-like, C-terminal domain JNN61_02175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNN61_02180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNN61_02185 PF00929 Exonuclease JNN61_02190 PF00270 DEAD/DEAH box helicase JNN61_02190 PF00271 Helicase conserved C-terminal domain JNN61_02190 PF08494 DEAD/H associated JNN61_02195 PF00462 Glutaredoxin JNN61_02200 PF00877 NlpC/P60 family JNN61_02205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JNN61_02205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JNN61_02210 PF07690 Major Facilitator Superfamily JNN61_02220 PF00356 Bacterial regulatory proteins, lacI family JNN61_02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_02225 PF03466 LysR substrate binding domain JNN61_02230 PF07690 Major Facilitator Superfamily JNN61_02240 PF00677 Lumazine binding domain JNN61_02245 PF01554 MatE JNN61_02250 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_02250 PF03212 Pertactin JNN61_02265 PF08803 Putative mono-oxygenase ydhR JNN61_02270 PF13454 FAD-NAD(P)-binding JNN61_02280 PF01292 Prokaryotic cytochrome b561 JNN61_02285 PF13247 4Fe-4S dicluster domain JNN61_02295 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain JNN61_02295 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 JNN61_02300 PF12800 4Fe-4S binding domain JNN61_02300 PF13247 4Fe-4S dicluster domain JNN61_02305 PF10965 Protein of unknown function (DUF2767) JNN61_02310 PF00224 Pyruvate kinase, barrel domain JNN61_02310 PF02887 Pyruvate kinase, alpha/beta domain JNN61_02315 PF04728 Lipoprotein leucine-zipper JNN61_02320 PF01476 LysM domain JNN61_02320 PF17969 L,D-transpeptidase C-terminal domain JNN61_02320 PF03734 L,D-transpeptidase catalytic domain JNN61_02325 PF02657 Fe-S metabolism associated domain JNN61_02330 PF00266 Aminotransferase class-V JNN61_02335 PF01458 Uncharacterized protein family (UPF0051) JNN61_02340 PF00005 ABC transporter JNN61_02345 PF01458 Uncharacterized protein family (UPF0051) JNN61_02350 PF01521 Iron-sulphur cluster biosynthesis JNN61_02355 PF15930 Domain of unknown function JNN61_02360 PF03061 Thioesterase superfamily JNN61_02365 PF01565 FAD binding domain JNN61_02365 PF02913 FAD linked oxidases, C-terminal domain JNN61_02365 PF13183 4Fe-4S dicluster domain JNN61_02370 PF01594 AI-2E family transporter JNN61_02380 PF08965 Domain of unknown function (DUF1870) JNN61_02385 PF07690 Major Facilitator Superfamily JNN61_02390 PF07690 Major Facilitator Superfamily JNN61_02395 PF08501 Shikimate dehydrogenase substrate binding domain JNN61_02395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JNN61_02400 PF01487 Type I 3-dehydroquinase JNN61_02405 PF01144 Coenzyme A transferase JNN61_02410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNN61_02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNN61_02410 PF02770 Acyl-CoA dehydrogenase, middle domain JNN61_02415 PF12833 Helix-turn-helix domain JNN61_02415 PF02311 AraC-like ligand binding domain JNN61_02420 PF01012 Electron transfer flavoprotein domain JNN61_02425 PF01012 Electron transfer flavoprotein domain JNN61_02425 PF00766 Electron transfer flavoprotein FAD-binding domain JNN61_02430 PF01494 FAD binding domain JNN61_02440 PF00501 AMP-binding enzyme JNN61_02440 PF13193 AMP-binding enzyme C-terminal domain JNN61_02445 PF02896 PEP-utilising enzyme, TIM barrel domain JNN61_02445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JNN61_02445 PF00391 PEP-utilising enzyme, mobile domain JNN61_02450 PF03618 Kinase/pyrophosphorylase JNN61_02455 PF00793 DAHP synthetase I family JNN61_02460 PF10636 Hemin uptake protein hemP JNN61_02465 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JNN61_02470 PF00563 EAL domain JNN61_02475 PF00877 NlpC/P60 family JNN61_02480 PF00005 ABC transporter JNN61_02485 PF00255 Glutathione peroxidase JNN61_02490 PF01032 FecCD transport family JNN61_02495 PF00216 Bacterial DNA-binding protein JNN61_02500 PF01588 Putative tRNA binding domain JNN61_02500 PF03147 Ferredoxin-fold anticodon binding domain JNN61_02500 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JNN61_02500 PF03484 tRNA synthetase B5 domain JNN61_02500 PF03483 B3/4 domain JNN61_02505 PF01409 tRNA synthetases class II core domain (F) JNN61_02505 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JNN61_02515 PF00453 Ribosomal protein L20 JNN61_02520 PF01632 Ribosomal protein L35 JNN61_02525 PF05198 Translation initiation factor IF-3, N-terminal domain JNN61_02525 PF00707 Translation initiation factor IF-3, C-terminal domain JNN61_02530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNN61_02530 PF03129 Anticodon binding domain JNN61_02530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNN61_02530 PF02824 TGS domain JNN61_02555 PF08400 Prophage tail fibre N-terminal JNN61_02555 PF03335 Phage tail fibre repeat JNN61_02555 PF07484 Phage Tail Collar Domain JNN61_02560 PF06316 Enterobacterial Ail/Lom protein JNN61_02590 PF06791 Prophage tail length tape measure protein JNN61_02630 PF03864 Phage major capsid protein E JNN61_02640 PF01972 Serine dehydrogenase proteinase JNN61_02640 PF01957 NfeD-like C-terminal, partner-binding JNN61_02650 PF02831 gpW JNN61_02655 PF02413 Caudovirales tail fibre assembly protein, lambda gpK JNN61_02660 PF07471 Phage DNA packaging protein Nu1 JNN61_02665 PF06291 Bor protein JNN61_02670 PF06085 Lipoprotein Rz1 precursor JNN61_02675 PF00959 Phage lysozyme JNN61_02680 PF04971 Bacteriophage P21 holin S JNN61_02685 PF12833 Helix-turn-helix domain JNN61_02690 PF08349 Protein of unknown function (DUF1722) JNN61_02695 PF08212 Lipocalin-like domain JNN61_02700 PF06530 Phage antitermination protein Q JNN61_02715 PF07102 Protein of unknown function (DUF1364) JNN61_02735 PF12833 Helix-turn-helix domain JNN61_02740 PF01161 Phosphatidylethanolamine-binding protein JNN61_02745 PF13408 Recombinase zinc beta ribbon domain JNN61_02745 PF00239 Resolvase, N terminal domain JNN61_02745 PF07508 Recombinase JNN61_02755 PF00893 Small Multidrug Resistance protein JNN61_02765 PF06992 Replication protein P JNN61_02785 PF00717 Peptidase S24-like JNN61_02785 PF01381 Helix-turn-helix JNN61_02855 PF04338 Protein of unknown function, DUF481 JNN61_02860 PF00294 pfkB family carbohydrate kinase JNN61_02865 PF11080 Endoribonuclease GhoS JNN61_02870 PF03881 Fructosamine kinase JNN61_02875 PF14002 YniB-like protein JNN61_02880 PF13419 Haloacid dehalogenase-like hydrolase JNN61_02885 PF04307 LexA-binding, inner membrane-associated putative hydrolase JNN61_02890 PF00375 Sodium:dicarboxylate symporter family JNN61_02900 PF10729 Cell division activator CedA JNN61_02905 PF06628 Catalase-related immune-responsive JNN61_02905 PF00199 Catalase JNN61_02905 PF18011 C-terminal domain found in long catalases JNN61_02910 PF04794 YdjC-like protein JNN61_02915 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNN61_02915 PF02056 Family 4 glycosyl hydrolase JNN61_02920 PF12833 Helix-turn-helix domain JNN61_02920 PF07883 Cupin domain JNN61_02925 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JNN61_02930 PF02378 Phosphotransferase system, EIIC JNN61_02935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_02940 PF04355 SmpA / OmlA family JNN61_02945 PF02540 NAD synthase JNN61_02955 PF05962 HutD JNN61_02960 PF07813 LTXXQ motif family protein JNN61_02965 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JNN61_02970 PF04996 Succinylarginine dihydrolase JNN61_02975 PF00171 Aldehyde dehydrogenase family JNN61_02980 PF04958 Arginine N-succinyltransferase beta subunit JNN61_02985 PF00202 Aminotransferase class-III JNN61_02990 PF03372 Endonuclease/Exonuclease/phosphatase family JNN61_02995 PF09335 SNARE associated Golgi protein JNN61_03005 PF09335 SNARE associated Golgi protein JNN61_03010 PF02627 Carboxymuconolactone decarboxylase family JNN61_03015 PF13416 Bacterial extracellular solute-binding protein JNN61_03020 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_03025 PF00005 ABC transporter JNN61_03030 PF00581 Rhodanese-like domain JNN61_03035 PF01066 CDP-alcohol phosphatidyltransferase JNN61_03040 PF00293 NUDIX domain JNN61_03045 PF07383 Protein of unknown function (DUF1496) JNN61_03050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JNN61_03050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JNN61_03055 PF01131 DNA topoisomerase JNN61_03055 PF01751 Toprim domain JNN61_03060 PF02769 AIR synthase related protein, C-terminal domain JNN61_03060 PF00586 AIR synthase related protein, N-terminal domain JNN61_03065 PF00881 Nitroreductase family JNN61_03070 PF01343 Peptidase family S49 JNN61_03075 PF00710 Asparaginase, N-terminal JNN61_03075 PF17763 Glutaminase/Asparaginase C-terminal domain JNN61_03080 PF00857 Isochorismatase family JNN61_03085 PF00083 Sugar (and other) transporter JNN61_03090 PF00455 DeoR C terminal sensor domain JNN61_03090 PF08220 DeoR-like helix-turn-helix domain JNN61_03095 PF00248 Aldo/keto reductase family JNN61_03100 PF00294 pfkB family carbohydrate kinase JNN61_03105 PF01116 Fructose-bisphosphate aldolase class-II JNN61_03110 PF00107 Zinc-binding dehydrogenase JNN61_03110 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_03115 PF00083 Sugar (and other) transporter JNN61_03120 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_03120 PF00107 Zinc-binding dehydrogenase JNN61_03125 PF07023 Protein of unknown function (DUF1315) JNN61_03130 PF01641 SelR domain JNN61_03135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JNN61_03135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JNN61_03140 PF01263 Aldose 1-epimerase JNN61_03145 PF00248 Aldo/keto reductase family JNN61_03150 PF06629 MltA-interacting protein MipA JNN61_03155 PF06798 PrkA serine protein kinase C-terminal domain JNN61_03155 PF08298 PrkA AAA domain JNN61_03160 PF04285 Protein of unknown function (DUF444) JNN61_03165 PF00990 Diguanylate cyclase, GGDEF domain JNN61_03165 PF17158 Membrane-associated sensor, integral membrane domain JNN61_03170 PF00990 Diguanylate cyclase, GGDEF domain JNN61_03170 PF17155 Gammaproteobacterial periplasmic sensor domain JNN61_03175 PF04073 Aminoacyl-tRNA editing domain JNN61_03185 PF04284 Protein of unknown function (DUF441) JNN61_03190 PF12833 Helix-turn-helix domain JNN61_03190 PF02311 AraC-like ligand binding domain JNN61_03195 PF07690 Major Facilitator Superfamily JNN61_03200 PF04343 Protein of unknown function, DUF488 JNN61_03205 PF03891 Domain of unknown function (DUF333) JNN61_03210 PF00990 Diguanylate cyclase, GGDEF domain JNN61_03210 PF13185 GAF domain JNN61_03225 PF04226 Transglycosylase associated protein JNN61_03230 PF08956 Domain of unknown function (DUF1869) JNN61_03235 PF09313 Domain of unknown function (DUF1971) JNN61_03240 PF01810 LysE type translocator JNN61_03245 PF03466 LysR substrate binding domain JNN61_03245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_03250 PF00180 Isocitrate/isopropylmalate dehydrogenase JNN61_03255 PF02028 BCCT, betaine/carnitine/choline family transporter JNN61_03260 PF00355 Rieske [2Fe-2S] domain JNN61_03260 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JNN61_03265 PF00175 Oxidoreductase NAD-binding domain JNN61_03265 PF00970 Oxidoreductase FAD-binding domain JNN61_03265 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_03270 PF01612 3'-5' exonuclease JNN61_03270 PF00570 HRDC domain JNN61_03275 PF13193 AMP-binding enzyme C-terminal domain JNN61_03275 PF00501 AMP-binding enzyme JNN61_03280 PF03843 Outer membrane lipoprotein Slp family JNN61_03285 PF00814 Glycoprotease family JNN61_03290 PF13307 Helicase C-terminal domain JNN61_03290 PF04851 Type III restriction enzyme, res subunit JNN61_03295 PF01042 Endoribonuclease L-PSP JNN61_03300 PF08986 Domain of unknown function (DUF1889) JNN61_03305 PF03701 Uncharacterised protein family (UPF0181) JNN61_03310 PF00425 chorismate binding enzyme JNN61_03310 PF04715 Anthranilate synthase component I, N terminal region JNN61_03315 PF00293 NUDIX domain JNN61_03320 PF03313 Serine dehydratase alpha chain JNN61_03320 PF03315 Serine dehydratase beta chain JNN61_03325 PF12792 CSS motif domain associated with EAL JNN61_03325 PF00563 EAL domain JNN61_03330 PF03741 Integral membrane protein TerC family JNN61_03330 PF03471 Transporter associated domain JNN61_03335 PF03830 PTS system sorbose subfamily IIB component JNN61_03335 PF03610 PTS system fructose IIA component JNN61_03340 PF03609 PTS system sorbose-specific iic component JNN61_03345 PF03613 PTS system mannose/fructose/sorbose family IID component JNN61_03350 PF06173 Protein of unknown function (DUF986) JNN61_03355 PF02659 Putative manganese efflux pump JNN61_03360 PF13847 Methyltransferase domain JNN61_03365 PF00313 'Cold-shock' DNA-binding domain JNN61_03370 PF10736 Protein of unknown function (DUF2627) JNN61_03375 PF13974 YebO-like protein JNN61_03380 PF13998 MgrB protein JNN61_03385 PF13996 YobH-like protein JNN61_03390 PF09339 IclR helix-turn-helix domain JNN61_03390 PF01614 Bacterial transcriptional regulator JNN61_03395 PF07690 Major Facilitator Superfamily JNN61_03400 PF01435 Peptidase family M48 JNN61_03405 PF11818 C-terminal domain of tail specific protease (DUF3340) JNN61_03405 PF03572 Peptidase family S41 JNN61_03405 PF17804 Tail specific protease N-terminal domain JNN61_03405 PF00595 PDZ domain JNN61_03410 PF04352 ProQ/FINO family JNN61_03410 PF17516 ProQ C-terminal domain JNN61_03415 PF13185 GAF domain JNN61_03420 PF04403 Paraquat-inducible protein A JNN61_03425 PF02470 MlaD protein JNN61_03430 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JNN61_03430 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JNN61_03430 PF01189 16S rRNA methyltransferase RsmB/F JNN61_03435 PF07351 Protein of unknown function (DUF1480) JNN61_03440 PF07358 Protein of unknown function (DUF1482) JNN61_03445 PF00149 Calcineurin-like phosphoesterase JNN61_03450 PF10709 Protein of unknown function (DUF2511) JNN61_03455 PF05425 Copper resistance protein D JNN61_03460 PF04234 CopC domain JNN61_03465 PF06440 DNA polymerase III, theta subunit JNN61_03470 PF00795 Carbon-nitrogen hydrolase JNN61_03475 PF00929 Exonuclease JNN61_03480 PF00326 Prolyl oligopeptidase family JNN61_03480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JNN61_03490 PF12323 Helix-turn-helix domain JNN61_03495 PF04391 Protein of unknown function (DUF533) JNN61_03500 PF13995 YebF-like protein JNN61_03505 PF07130 YebG protein JNN61_03510 PF02222 ATP-grasp domain JNN61_03515 PF01081 KDPG and KHG aldolase JNN61_03520 PF00920 Dehydratase family JNN61_03525 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JNN61_03525 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JNN61_03530 PF01418 Helix-turn-helix domain, rpiR family JNN61_03530 PF01380 SIS domain JNN61_03535 PF00224 Pyruvate kinase, barrel domain JNN61_03535 PF02887 Pyruvate kinase, alpha/beta domain JNN61_03540 PF03279 Bacterial lipid A biosynthesis acyltransferase JNN61_03545 PF01476 LysM domain JNN61_03545 PF01551 Peptidase family M23 JNN61_03545 PF08525 Opacity-associated protein A N-terminal motif JNN61_03550 PF01297 Zinc-uptake complex component A periplasmic JNN61_03555 PF00005 ABC transporter JNN61_03560 PF00950 ABC 3 transport family JNN61_03565 PF05496 Holliday junction DNA helicase RuvB P-loop domain JNN61_03565 PF17864 RuvB AAA lid domain JNN61_03565 PF05491 RuvB C-terminal winged helix domain JNN61_03570 PF07499 RuvA, C-terminal domain JNN61_03570 PF01330 RuvA N terminal domain JNN61_03580 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JNN61_03585 PF02075 Crossover junction endodeoxyribonuclease RuvC JNN61_03590 PF01709 Transcriptional regulator JNN61_03595 PF00293 NUDIX domain JNN61_03600 PF01336 OB-fold nucleic acid binding domain JNN61_03600 PF00152 tRNA synthetases class II (D, K and N) JNN61_03600 PF02938 GAD domain JNN61_03605 PF00857 Isochorismatase family JNN61_03610 PF01904 Protein of unknown function DUF72 JNN61_03615 PF01124 MAPEG family JNN61_03620 PF13649 Methyltransferase domain JNN61_03625 PF08003 Protein of unknown function (DUF1698) JNN61_03630 PF00384 Molybdopterin oxidoreductase JNN61_03630 PF01568 Molydopterin dinucleotide binding domain JNN61_03630 PF18364 Molybdopterin oxidoreductase N-terminal domain JNN61_03635 PF03264 NapC/NirT cytochrome c family, N-terminal region JNN61_03640 PF03932 CutC family JNN61_03645 PF06185 YecM protein JNN61_03650 PF05746 DALR anticodon binding domain JNN61_03650 PF00750 tRNA synthetases class I (R) JNN61_03650 PF03485 Arginyl tRNA synthetase N terminal domain JNN61_03655 PF06366 Flagellar protein FlhE JNN61_03660 PF00771 FHIPEP family JNN61_03665 PF01312 FlhB HrpN YscU SpaS Family JNN61_03670 PF04344 Chemotaxis phosphatase, CheZ JNN61_03675 PF00072 Response regulator receiver domain JNN61_03680 PF00072 Response regulator receiver domain JNN61_03680 PF01339 CheB methylesterase JNN61_03685 PF03705 CheR methyltransferase, all-alpha domain JNN61_03685 PF01739 CheR methyltransferase, SAM binding domain JNN61_03690 PF00672 HAMP domain JNN61_03690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNN61_03690 PF02203 Tar ligand binding domain homologue JNN61_03695 PF02203 Tar ligand binding domain homologue JNN61_03695 PF00672 HAMP domain JNN61_03695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNN61_03700 PF01584 CheW-like domain JNN61_03705 PF09078 CheY binding JNN61_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_03705 PF01627 Hpt domain JNN61_03705 PF01584 CheW-like domain JNN61_03705 PF02895 Signal transducing histidine kinase, homodimeric domain JNN61_03710 PF00691 OmpA family JNN61_03710 PF13677 Membrane MotB of proton-channel complex MotA/MotB JNN61_03715 PF01618 MotA/TolQ/ExbB proton channel family JNN61_03720 PF05280 Flagellar transcriptional activator (FlhC) JNN61_03725 PF05247 Flagellar transcriptional activator (FlhD) JNN61_03730 PF00582 Universal stress protein family JNN61_03735 PF00982 Glycosyltransferase family 20 JNN61_03740 PF02358 Trehalose-phosphatase JNN61_03745 PF02653 Branched-chain amino acid transport system / permease component JNN61_03750 PF00005 ABC transporter JNN61_03755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNN61_03760 PF00210 Ferritin-like domain JNN61_03765 PF10964 Protein of unknown function (DUF2766) JNN61_03775 PF13992 YecR-like lipoprotein JNN61_03780 PF00210 Ferritin-like domain JNN61_03785 PF10678 Protein of unknown function (DUF2492) JNN61_03790 PF03222 Tryptophan/tyrosine permease family JNN61_03795 PF03695 Uncharacterised protein family (UPF0149) JNN61_03795 PF02810 SEC-C motif JNN61_03815 PF01066 CDP-alcohol phosphatidyltransferase JNN61_03820 PF08459 UvrC Helix-hairpin-helix N-terminal JNN61_03820 PF01541 GIY-YIG catalytic domain JNN61_03820 PF02151 UvrB/uvrC motif JNN61_03825 PF00196 Bacterial regulatory proteins, luxR family JNN61_03825 PF00072 Response regulator receiver domain JNN61_03835 PF10769 Protein of unknown function (DUF2594) JNN61_03840 PF03472 Autoinducer binding domain JNN61_03840 PF00196 Bacterial regulatory proteins, luxR family JNN61_03845 PF00005 ABC transporter JNN61_03850 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_03855 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_03860 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_03865 PF02899 Phage integrase, N-terminal SAM-like domain JNN61_03870 PF04545 Sigma-70, region 4 JNN61_03870 PF04539 Sigma-70 region 3 JNN61_03870 PF04542 Sigma-70 region 2 JNN61_03875 PF00669 Bacterial flagellin N-terminal helical region JNN61_03875 PF12445 Flagellin protein JNN61_03875 PF00700 Bacterial flagellin C-terminal helical region JNN61_03880 PF02465 Flagellar hook-associated protein 2 N-terminus JNN61_03880 PF07195 Flagellar hook-associated protein 2 C-terminus JNN61_03885 PF02561 Flagellar protein FliS JNN61_03890 PF05400 Flagellar protein FliT JNN61_03895 PF02806 Alpha amylase, C-terminal all-beta domain JNN61_03895 PF00128 Alpha amylase, catalytic domain JNN61_03900 PF13987 YedD-like protein JNN61_03905 PF04143 Sulphur transport JNN61_03910 PF01206 Sulfurtransferase TusA JNN61_03915 PF02586 SOS response associated peptidase (SRAP) JNN61_03925 PF17607 Family of unknown function (DUF5503) JNN61_03930 PF02049 Flagellar hook-basal body complex protein FliE JNN61_03935 PF01514 Secretory protein of YscJ/FliF family JNN61_03935 PF08345 Flagellar M-ring protein C-terminal JNN61_03940 PF14842 FliG N-terminal domain JNN61_03940 PF14841 FliG middle domain JNN61_03940 PF01706 FliG C-terminal domain JNN61_03945 PF02108 Flagellar assembly protein FliH JNN61_03950 PF18269 T3SS EscN ATPase C-terminal domain JNN61_03950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNN61_03955 PF02050 Flagellar FliJ protein JNN61_03960 PF02120 Flagellar hook-length control protein FliK JNN61_03965 PF03748 Flagellar basal body-associated protein FliL JNN61_03970 PF02154 Flagellar motor switch protein FliM JNN61_03970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JNN61_03975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JNN61_03975 PF16973 Flagellar motor switch protein FliN N-terminal JNN61_03980 PF04347 Flagellar biosynthesis protein, FliO JNN61_03985 PF00813 FliP family JNN61_03990 PF01313 Bacterial export proteins, family 3 JNN61_03995 PF01311 Bacterial export proteins, family 1 JNN61_04000 PF00196 Bacterial regulatory proteins, luxR family JNN61_04005 PF10781 Dextransucrase DSRB JNN61_04010 PF10733 Protein of unknown function (DUF2525) JNN61_04025 PF09926 Uncharacterized small protein (DUF2158) JNN61_04030 PF05661 Protein of unknown function (DUF808) JNN61_04035 PF00892 EamA-like transporter family JNN61_04040 PF03852 DNA mismatch endonuclease Vsr JNN61_04045 PF00145 C-5 cytosine-specific DNA methylase JNN61_04045 PF18284 DNA methylase N-terminal domain JNN61_04050 PF01966 HD domain JNN61_04060 PF00267 Gram-negative porin JNN61_04070 PF00512 His Kinase A (phospho-acceptor) domain JNN61_04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_04075 PF00486 Transcriptional regulatory protein, C terminal JNN61_04075 PF00072 Response regulator receiver domain JNN61_04080 PF00576 HIUase/Transthyretin family JNN61_04085 PF00174 Oxidoreductase molybdopterin binding domain JNN61_04090 PF01794 Ferric reductase like transmembrane component JNN61_04095 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JNN61_04100 PF01292 Prokaryotic cytochrome b561 JNN61_04110 PF06167 Glucose-regulated metallo-peptidase M90 JNN61_04120 PF00589 Phage integrase family JNN61_04120 PF13356 Arm DNA-binding domain JNN61_04125 PF00425 chorismate binding enzyme JNN61_04130 PF07690 Major Facilitator Superfamily JNN61_04135 PF00005 ABC transporter JNN61_04135 PF00664 ABC transporter transmembrane region JNN61_04140 PF04954 Siderophore-interacting protein JNN61_04140 PF00664 ABC transporter transmembrane region JNN61_04140 PF00005 ABC transporter JNN61_04140 PF08021 Siderophore-interacting FAD-binding domain JNN61_04150 PF00550 Phosphopantetheine attachment site JNN61_04150 PF00501 AMP-binding enzyme JNN61_04150 PF00668 Condensation domain JNN61_04150 PF08242 Methyltransferase domain JNN61_04155 PF00109 Beta-ketoacyl synthase, N-terminal domain JNN61_04155 PF00550 Phosphopantetheine attachment site JNN61_04155 PF00698 Acyl transferase domain JNN61_04155 PF00668 Condensation domain JNN61_04155 PF16197 Ketoacyl-synthetase C-terminal extension JNN61_04155 PF02801 Beta-ketoacyl synthase, C-terminal domain JNN61_04165 PF00975 Thioesterase domain JNN61_04170 PF00501 AMP-binding enzyme JNN61_04170 PF13193 AMP-binding enzyme C-terminal domain JNN61_04175 PF00593 TonB dependent receptor JNN61_04175 PF07715 TonB-dependent Receptor Plug Domain JNN61_04180 PF02369 Bacterial Ig-like domain (group 1) JNN61_04180 PF09134 Invasin, domain 3 JNN61_04180 PF11924 Inverse autotransporter, beta-domain JNN61_04195 PF07690 Major Facilitator Superfamily JNN61_04195 PF00083 Sugar (and other) transporter JNN61_04200 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JNN61_04200 PF01048 Phosphorylase superfamily JNN61_04205 PF01709 Transcriptional regulator JNN61_04215 PF01554 MatE JNN61_04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_04225 PF03466 LysR substrate binding domain JNN61_04230 PF03466 LysR substrate binding domain JNN61_04230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_04240 PF17969 L,D-transpeptidase C-terminal domain JNN61_04240 PF03734 L,D-transpeptidase catalytic domain JNN61_04245 PF02277 Phosphoribosyltransferase JNN61_04250 PF02654 Cobalamin-5-phosphate synthase JNN61_04270 PF02126 Phosphotriesterase family JNN61_04300 PF05321 Haemolysin expression modulating protein JNN61_04315 PF13148 Protein of unknown function (DUF3987) JNN61_04325 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_04325 PF03797 Autotransporter beta-domain JNN61_04325 PF13018 Extended Signal Peptide of Type V secretion system JNN61_04340 PF06006 Bacterial protein of unknown function (DUF905) JNN61_04345 PF06067 Domain of unknown function (DUF932) JNN61_04350 PF03230 Antirestriction protein JNN61_04355 PF04002 RadC-like JAB domain JNN61_04360 PF06174 Protein of unknown function (DUF987) JNN61_04365 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JNN61_04370 PF06755 CbtA_toxin of type IV toxin-antitoxin system JNN61_04390 PF10662 Ethanolamine utilisation - propanediol utilisation JNN61_04395 PF04363 Protein of unknown function (DUF496) JNN61_04400 PF04632 Fusaric acid resistance protein family JNN61_04405 PF06445 GyrI-like small molecule binding domain JNN61_04410 PF00768 D-alanyl-D-alanine carboxypeptidase JNN61_04410 PF07943 Penicillin-binding protein 5, C-terminal domain JNN61_04415 PF00929 Exonuclease JNN61_04415 PF08411 Exonuclease C-terminal JNN61_04420 PF01206 Sulfurtransferase TusA JNN61_04425 PF04143 Sulphur transport JNN61_04430 PF13520 Amino acid permease JNN61_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_04440 PF03466 LysR substrate binding domain JNN61_04445 PF01370 NAD dependent epimerase/dehydratase family JNN61_04450 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JNN61_04455 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JNN61_04465 PF08029 HisG, C-terminal domain JNN61_04465 PF01634 ATP phosphoribosyltransferase JNN61_04470 PF00815 Histidinol dehydrogenase JNN61_04475 PF00155 Aminotransferase class I and II JNN61_04480 PF00475 Imidazoleglycerol-phosphate dehydratase JNN61_04485 PF00117 Glutamine amidotransferase class-I JNN61_04490 PF00977 Histidine biosynthesis protein JNN61_04495 PF00977 Histidine biosynthesis protein JNN61_04500 PF01502 Phosphoribosyl-AMP cyclohydrolase JNN61_04500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JNN61_04505 PF02706 Chain length determinant protein JNN61_04510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JNN61_04510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JNN61_04510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JNN61_04515 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JNN61_04515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNN61_04540 PF00535 Glycosyl transferase family 2 JNN61_04550 PF00535 Glycosyl transferase family 2 JNN61_04555 PF00483 Nucleotidyl transferase JNN61_04560 PF01370 NAD dependent epimerase/dehydratase family JNN61_04570 PF13439 Glycosyltransferase Family 4 JNN61_04570 PF00534 Glycosyl transferases group 1 JNN61_04575 PF04230 Polysaccharide pyruvyl transferase JNN61_04585 PF02397 Bacterial sugar transferase JNN61_04590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JNN61_04590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JNN61_04590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JNN61_04590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JNN61_04595 PF01050 Mannose-6-phosphate isomerase JNN61_04595 PF00483 Nucleotidyl transferase JNN61_04600 PF00534 Glycosyl transferases group 1 JNN61_04600 PF13579 Glycosyl transferase 4-like domain JNN61_04605 PF00293 NUDIX domain JNN61_04610 PF01370 NAD dependent epimerase/dehydratase family JNN61_04615 PF16363 GDP-mannose 4,6 dehydratase JNN61_04620 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_04625 PF00535 Glycosyl transferase family 2 JNN61_04635 PF00534 Glycosyl transferases group 1 JNN61_04635 PF13439 Glycosyltransferase Family 4 JNN61_04640 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_04645 PF00535 Glycosyl transferase family 2 JNN61_04650 PF13614 AAA domain JNN61_04650 PF13807 G-rich domain on putative tyrosine kinase JNN61_04650 PF02706 Chain length determinant protein JNN61_04655 PF01451 Low molecular weight phosphotyrosine protein phosphatase JNN61_04660 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JNN61_04660 PF10531 SLBB domain JNN61_04660 PF02563 Polysaccharide biosynthesis/export protein JNN61_04665 PF03471 Transporter associated domain JNN61_04665 PF00571 CBS domain JNN61_04665 PF03741 Integral membrane protein TerC family JNN61_04670 PF05170 AsmA family JNN61_04675 PF00692 dUTPase JNN61_04680 PF00485 Phosphoribulokinase / Uridine kinase family JNN61_04685 PF05231 MASE1 JNN61_04685 PF00563 EAL domain JNN61_04685 PF13426 PAS domain JNN61_04685 PF08448 PAS fold JNN61_04685 PF08447 PAS fold JNN61_04685 PF00990 Diguanylate cyclase, GGDEF domain JNN61_04690 PF06029 AlkA N-terminal domain JNN61_04690 PF00730 HhH-GPD superfamily base excision DNA repair protein JNN61_04695 PF00012 Hsp70 protein JNN61_04710 PF00092 von Willebrand factor type A domain JNN61_04730 PF13533 Biotin-lipoyl like JNN61_04735 PF00873 AcrB/AcrD/AcrF family JNN61_04740 PF00873 AcrB/AcrD/AcrF family JNN61_04745 PF07690 Major Facilitator Superfamily JNN61_04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_04750 PF00512 His Kinase A (phospho-acceptor) domain JNN61_04750 PF00672 HAMP domain JNN61_04755 PF00072 Response regulator receiver domain JNN61_04755 PF00486 Transcriptional regulatory protein, C terminal JNN61_04760 PF07411 Domain of unknown function (DUF1508) JNN61_04765 PF16325 Peptidase family U32 C-terminal domain JNN61_04765 PF01136 Peptidase family U32 JNN61_04775 PF00781 Diacylglycerol kinase catalytic domain JNN61_04780 PF08220 DeoR-like helix-turn-helix domain JNN61_04785 PF00107 Zinc-binding dehydrogenase JNN61_04785 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_04790 PF03611 PTS system sugar-specific permease component JNN61_04795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_04800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_04805 PF08013 Tagatose 6 phosphate kinase JNN61_04810 PF01116 Fructose-bisphosphate aldolase class-II JNN61_04815 PF01791 DeoC/LacD family aldolase JNN61_04820 PF03825 Nucleoside H+ symporter JNN61_04825 PF03747 ADP-ribosylglycohydrolase JNN61_04830 PF00294 pfkB family carbohydrate kinase JNN61_04835 PF00392 Bacterial regulatory proteins, gntR family JNN61_04835 PF07702 UTRA domain JNN61_04840 PF01183 Glycosyl hydrolases family 25 JNN61_04845 PF08543 Phosphomethylpyrimidine kinase JNN61_04850 PF02110 Hydroxyethylthiazole kinase family JNN61_04855 PF02583 Metal-sensitive transcriptional repressor JNN61_04860 PF03824 High-affinity nickel-transport protein JNN61_04865 PF11776 Nickel/cobalt transporter regulator JNN61_04870 PF00419 Fimbrial protein JNN61_04875 PF13954 PapC N-terminal domain JNN61_04875 PF13953 PapC C-terminal domain JNN61_04875 PF00577 Outer membrane usher protein JNN61_04880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_04880 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_04885 PF00419 Fimbrial protein JNN61_04890 PF10836 Protein of unknown function (DUF2574) JNN61_04895 PF10609 NUBPL iron-transfer P-loop NTPase JNN61_04900 PF09334 tRNA synthetases class I (M) JNN61_04900 PF01588 Putative tRNA binding domain JNN61_04905 PF13569 Domain of unknown function (DUF4132) JNN61_04910 PF13569 Domain of unknown function (DUF4132) JNN61_04915 PF13569 Domain of unknown function (DUF4132) JNN61_04935 PF05762 VWA domain containing CoxE-like protein JNN61_04940 PF04434 SWIM zinc finger JNN61_04945 PF06998 Protein of unknown function (DUF1307) JNN61_04950 PF07308 Protein of unknown function (DUF1456) JNN61_04955 PF04397 LytTr DNA-binding domain JNN61_04955 PF00072 Response regulator receiver domain JNN61_04960 PF06580 Histidine kinase JNN61_04960 PF07694 5TMR of 5TMR-LYT JNN61_04965 PF13411 MerR HTH family regulatory protein JNN61_04975 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_04980 PF00005 ABC transporter JNN61_04985 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_04990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNN61_04995 PF14310 Fibronectin type III-like domain JNN61_04995 PF01915 Glycosyl hydrolase family 3 C-terminal domain JNN61_04995 PF00933 Glycosyl hydrolase family 3 N terminal domain JNN61_05000 PF01565 FAD binding domain JNN61_05000 PF09330 D-lactate dehydrogenase, membrane binding JNN61_05005 PF00768 D-alanyl-D-alanine carboxypeptidase JNN61_05010 PF04893 Yip1 domain JNN61_05015 PF09335 SNARE associated Golgi protein JNN61_05025 PF02321 Outer membrane efflux protein JNN61_05035 PF01207 Dihydrouridine synthase (Dus) JNN61_05040 PF03788 LrgA family JNN61_05045 PF04172 LrgB-like family JNN61_05050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNN61_05050 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JNN61_05055 PF02698 DUF218 domain JNN61_05060 PF10808 Protein of unknown function (DUF2542) JNN61_05065 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JNN61_05065 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_05070 PF01180 Dihydroorotate dehydrogenase JNN61_05075 PF02653 Branched-chain amino acid transport system / permease component JNN61_05080 PF00005 ABC transporter JNN61_05085 PF13407 Periplasmic binding protein domain JNN61_05090 PF00356 Bacterial regulatory proteins, lacI family JNN61_05095 PF04235 Protein of unknown function (DUF418) JNN61_05100 PF01227 GTP cyclohydrolase I JNN61_05105 PF00756 Putative esterase JNN61_05110 PF07715 TonB-dependent Receptor Plug Domain JNN61_05110 PF00593 TonB dependent receptor JNN61_05115 PF00324 Amino acid permease JNN61_05120 PF03466 LysR substrate binding domain JNN61_05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_05125 PF03601 Conserved hypothetical protein 698 JNN61_05130 PF01261 Xylose isomerase-like TIM barrel JNN61_05135 PF00294 pfkB family carbohydrate kinase JNN61_05140 PF07662 Na+ dependent nucleoside transporter C-terminus JNN61_05140 PF01773 Na+ dependent nucleoside transporter N-terminus JNN61_05145 PF01156 Inosine-uridine preferring nucleoside hydrolase JNN61_05150 PF00027 Cyclic nucleotide-binding domain JNN61_05155 PF01773 Na+ dependent nucleoside transporter N-terminus JNN61_05155 PF07662 Na+ dependent nucleoside transporter C-terminus JNN61_05160 PF04227 Indigoidine synthase A like protein JNN61_05165 PF00294 pfkB family carbohydrate kinase JNN61_05170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_05170 PF02378 Phosphotransferase system, EIIC JNN61_05175 PF00294 pfkB family carbohydrate kinase JNN61_05180 PF00381 PTS HPr component phosphorylation site JNN61_05180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_05185 PF07690 Major Facilitator Superfamily JNN61_05190 PF03692 Putative zinc- or iron-chelating domain JNN61_05195 PF08207 Elongation factor P (EF-P) KOW-like domain JNN61_05195 PF09285 Elongation factor P, C-terminal JNN61_05195 PF01132 Elongation factor P (EF-P) OB domain JNN61_05200 PF01232 Mannitol dehydrogenase Rossmann domain JNN61_05200 PF08125 Mannitol dehydrogenase C-terminal domain JNN61_05205 PF02492 CobW/HypB/UreG, nucleotide-binding domain JNN61_05205 PF07683 Cobalamin synthesis protein cobW C-terminal domain JNN61_05210 PF01569 PAP2 superfamily JNN61_05215 PF00877 NlpC/P60 family JNN61_05220 PF00563 EAL domain JNN61_05220 PF12792 CSS motif domain associated with EAL JNN61_05225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_05230 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_05235 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_05235 PF12911 N-terminal TM domain of oligopeptide transport permease C JNN61_05240 PF00005 ABC transporter JNN61_05240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_05245 PF13989 YejG-like protein JNN61_05250 PF07690 Major Facilitator Superfamily JNN61_05255 PF01479 S4 domain JNN61_05255 PF00849 RNA pseudouridylate synthase JNN61_05260 PF04851 Type III restriction enzyme, res subunit JNN61_05260 PF00271 Helicase conserved C-terminal domain JNN61_05265 PF01386 Ribosomal L25p family JNN61_05270 PF04245 37-kD nucleoid-associated bacterial protein JNN61_05275 PF07208 Protein of unknown function (DUF1414) JNN61_05280 PF11893 Domain of unknown function (DUF3413) JNN61_05280 PF00884 Sulfatase JNN61_05290 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_05290 PF03797 Autotransporter beta-domain JNN61_05290 PF03212 Pertactin JNN61_05295 PF00072 Response regulator receiver domain JNN61_05295 PF00196 Bacterial regulatory proteins, luxR family JNN61_05300 PF03918 Cytochrome C biogenesis protein JNN61_05305 PF08534 Redoxin JNN61_05310 PF01578 Cytochrome C assembly protein JNN61_05310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JNN61_05315 PF03100 CcmE JNN61_05320 PF04995 Heme exporter protein D (CcmD) JNN61_05325 PF01578 Cytochrome C assembly protein JNN61_05330 PF03379 CcmB protein JNN61_05335 PF00005 ABC transporter JNN61_05340 PF03264 NapC/NirT cytochrome c family, N-terminal region JNN61_05345 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JNN61_05350 PF13237 4Fe-4S dicluster domain JNN61_05350 PF12801 4Fe-4S binding domain JNN61_05355 PF12838 4Fe-4S dicluster domain JNN61_05355 PF12800 4Fe-4S binding domain JNN61_05360 PF00384 Molybdopterin oxidoreductase JNN61_05360 PF01568 Molydopterin dinucleotide binding domain JNN61_05360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNN61_05365 PF03927 NapD protein JNN61_05370 PF12800 4Fe-4S binding domain JNN61_05370 PF13187 4Fe-4S dicluster domain JNN61_05370 PF00037 4Fe-4S binding domain JNN61_05375 PF03974 Ecotin JNN61_05380 PF06039 Malate:quinone oxidoreductase (Mqo) JNN61_05385 PF00005 ABC transporter JNN61_05390 PF13532 2OG-Fe(II) oxygenase superfamily JNN61_05395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JNN61_05395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JNN61_05395 PF12833 Helix-turn-helix domain JNN61_05395 PF02805 Metal binding domain of Ada JNN61_05400 PF02424 ApbE family JNN61_05405 PF00267 Gram-negative porin JNN61_05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_05410 PF01627 Hpt domain JNN61_05410 PF16359 RcsD-ABL domain JNN61_05415 PF00072 Response regulator receiver domain JNN61_05415 PF00196 Bacterial regulatory proteins, luxR family JNN61_05420 PF09456 RcsC Alpha-Beta-Loop (ABL) JNN61_05420 PF00512 His Kinase A (phospho-acceptor) domain JNN61_05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_05420 PF00072 Response regulator receiver domain JNN61_05425 PF00512 His Kinase A (phospho-acceptor) domain JNN61_05425 PF00989 PAS fold JNN61_05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_05430 PF02954 Bacterial regulatory protein, Fis family JNN61_05430 PF00072 Response regulator receiver domain JNN61_05430 PF00158 Sigma-54 interaction domain JNN61_05435 PF01144 Coenzyme A transferase JNN61_05440 PF01144 Coenzyme A transferase JNN61_05445 PF02667 Short chain fatty acid transporter JNN61_05450 PF02803 Thiolase, C-terminal domain JNN61_05450 PF00108 Thiolase, N-terminal domain JNN61_05455 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) JNN61_05460 PF10062 Predicted secreted protein (DUF2300) JNN61_05460 PF08486 Stage II sporulation protein JNN61_05465 PF07703 Alpha-2-macroglobulin bait region domain JNN61_05465 PF01835 MG2 domain JNN61_05465 PF00207 Alpha-2-macroglobulin family JNN61_05470 PF06672 Protein of unknown function (DUF1175) JNN61_05475 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) JNN61_05480 PF00521 DNA gyrase/topoisomerase IV, subunit A JNN61_05480 PF03989 DNA gyrase C-terminal domain, beta-propeller JNN61_05490 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JNN61_05490 PF03797 Autotransporter beta-domain JNN61_05490 PF12951 Passenger-associated-transport-repeat JNN61_05495 PF02867 Ribonucleotide reductase, barrel domain JNN61_05495 PF03477 ATP cone domain JNN61_05495 PF00317 Ribonucleotide reductase, all-alpha domain JNN61_05500 PF00268 Ribonucleotide reductase, small chain JNN61_05505 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_05515 PF07690 Major Facilitator Superfamily JNN61_05530 PF03009 Glycerophosphoryl diester phosphodiesterase family JNN61_05535 PF07690 Major Facilitator Superfamily JNN61_05540 PF04324 BFD-like [2Fe-2S] binding domain JNN61_05540 PF01266 FAD dependent oxidoreductase JNN61_05545 PF00890 FAD binding domain JNN61_05550 PF13183 4Fe-4S dicluster domain JNN61_05550 PF02754 Cysteine-rich domain JNN61_05555 PF04754 Putative transposase, YhgA-like JNN61_05560 PF03328 HpcH/HpaI aldolase/citrate lyase family JNN61_05565 PF07690 Major Facilitator Superfamily JNN61_05570 PF13378 Enolase C-terminal domain-like JNN61_05570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNN61_05575 PF09339 IclR helix-turn-helix domain JNN61_05575 PF01614 Bacterial transcriptional regulator JNN61_05580 PF00994 Probable molybdopterin binding domain JNN61_05585 PF07437 YfaZ precursor JNN61_05590 PF00293 NUDIX domain JNN61_05595 PF00300 Histidine phosphatase superfamily (branch 1) JNN61_05600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JNN61_05605 PF00535 Glycosyl transferase family 2 JNN61_05610 PF02911 Formyl transferase, C-terminal domain JNN61_05610 PF01370 NAD dependent epimerase/dehydratase family JNN61_05610 PF00551 Formyl transferase JNN61_05615 PF01522 Polysaccharide deacetylase JNN61_05620 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JNN61_05625 PF00892 EamA-like transporter family JNN61_05640 PF00501 AMP-binding enzyme JNN61_05640 PF13193 AMP-binding enzyme C-terminal domain JNN61_05645 PF13378 Enolase C-terminal domain-like JNN61_05650 PF00378 Enoyl-CoA hydratase/isomerase JNN61_05655 PF12697 Alpha/beta hydrolase family JNN61_05660 PF16582 Middle domain of thiamine pyrophosphate JNN61_05660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNN61_05660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_05665 PF00425 chorismate binding enzyme JNN61_05670 PF05957 Bacterial protein of unknown function (DUF883) JNN61_05675 PF13673 Acetyltransferase (GNAT) domain JNN61_05680 PF12706 Beta-lactamase superfamily domain JNN61_05685 PF02902 Ulp1 protease family, C-terminal catalytic domain JNN61_05690 PF04389 Peptidase family M28 JNN61_05695 PF08974 Domain of unknown function (DUF1877) JNN61_05700 PF01797 Transposase IS200 like JNN61_05705 PF00361 Proton-conducting membrane transporter JNN61_05710 PF00361 Proton-conducting membrane transporter JNN61_05715 PF00361 Proton-conducting membrane transporter JNN61_05715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JNN61_05720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JNN61_05725 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JNN61_05730 PF12838 4Fe-4S dicluster domain JNN61_05735 PF00146 NADH dehydrogenase JNN61_05740 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JNN61_05740 PF01568 Molydopterin dinucleotide binding domain JNN61_05740 PF00384 Molybdopterin oxidoreductase JNN61_05740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNN61_05745 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JNN61_05745 PF10531 SLBB domain JNN61_05745 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JNN61_05755 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JNN61_05755 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JNN61_05760 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JNN61_05765 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JNN61_05770 PF03466 LysR substrate binding domain JNN61_05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_05775 PF00155 Aminotransferase class I and II JNN61_05785 PF02080 TrkA-C domain JNN61_05785 PF03600 Citrate transporter JNN61_05790 PF13419 Haloacid dehalogenase-like hydrolase JNN61_05795 PF03887 YfbU domain JNN61_05800 PF04217 Protein of unknown function, DUF412 JNN61_05805 PF00871 Acetokinase family JNN61_05810 PF07085 DRTGG domain JNN61_05810 PF01515 Phosphate acetyl/butaryl transferase JNN61_05815 PF03606 C4-dicarboxylate anaerobic carrier JNN61_05820 PF00293 NUDIX domain JNN61_05825 PF12850 Calcineurin-like phosphoesterase superfamily domain JNN61_05830 PF02798 Glutathione S-transferase, N-terminal domain JNN61_05830 PF14834 Glutathione S-transferase, C-terminal domain JNN61_05835 PF02798 Glutathione S-transferase, N-terminal domain JNN61_05835 PF00043 Glutathione S-transferase, C-terminal domain JNN61_05840 PF02152 Dihydroneopterin aldolase JNN61_05845 PF08338 Domain of unknown function (DUF1731) JNN61_05845 PF01370 NAD dependent epimerase/dehydratase family JNN61_05850 PF04754 Putative transposase, YhgA-like JNN61_05855 PF00005 ABC transporter JNN61_05860 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_05865 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_05870 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_05875 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_05880 PF02441 Flavoprotein JNN61_05885 PF00156 Phosphoribosyl transferase domain JNN61_05890 PF02674 Colicin V production protein JNN61_05895 PF05036 Sporulation related domain JNN61_05900 PF08245 Mur ligase middle domain JNN61_05900 PF02875 Mur ligase family, glutamate ligase domain JNN61_05905 PF01039 Carboxyl transferase domain JNN61_05905 PF17848 Acetyl-coA carboxylase zinc finger domain JNN61_05910 PF09335 SNARE associated Golgi protein JNN61_05915 PF01416 tRNA pseudouridine synthase JNN61_05920 PF02774 Semialdehyde dehydrogenase, dimerisation domain JNN61_05920 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNN61_05925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNN61_05925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNN61_05925 PF11890 Domain of unknown function (DUF3410) JNN61_05935 PF07690 Major Facilitator Superfamily JNN61_05940 PF00109 Beta-ketoacyl synthase, N-terminal domain JNN61_05940 PF02801 Beta-ketoacyl synthase, C-terminal domain JNN61_05945 PF01266 FAD dependent oxidoreductase JNN61_05945 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JNN61_05950 PF08891 YfcL protein JNN61_05955 PF04315 Elongation factor P hydroxylase JNN61_05960 PF01925 Sulfite exporter TauE/SafE JNN61_05965 PF03411 Penicillin-insensitive murein endopeptidase JNN61_05970 PF01264 Chorismate synthase JNN61_05975 PF05175 Methyltransferase small domain JNN61_05980 PF01713 Smr domain JNN61_05985 PF11245 Protein of unknown function (DUF2544) JNN61_05990 PF00419 Fimbrial protein JNN61_05995 PF00419 Fimbrial protein JNN61_06000 PF00419 Fimbrial protein JNN61_06005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_06005 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_06010 PF13954 PapC N-terminal domain JNN61_06010 PF00577 Outer membrane usher protein JNN61_06010 PF13953 PapC C-terminal domain JNN61_06015 PF00419 Fimbrial protein JNN61_06020 PF00300 Histidine phosphatase superfamily (branch 1) JNN61_06025 PF00378 Enoyl-CoA hydratase/isomerase JNN61_06025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JNN61_06025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JNN61_06030 PF00108 Thiolase, N-terminal domain JNN61_06030 PF02803 Thiolase, C-terminal domain JNN61_06035 PF04175 Protein of unknown function (DUF406) JNN61_06040 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JNN61_06050 PF04333 MlaA lipoprotein JNN61_06055 PF01226 Formate/nitrite transporter JNN61_06070 PF01306 LacY proton/sugar symporter JNN61_06075 PF00294 pfkB family carbohydrate kinase JNN61_06080 PF00251 Glycosyl hydrolases family 32 N-terminal domain JNN61_06080 PF08244 Glycosyl hydrolases family 32 C terminal JNN61_06085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNN61_06085 PF00356 Bacterial regulatory proteins, lacI family JNN61_06095 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_06100 PF07690 Major Facilitator Superfamily JNN61_06105 PF00529 HlyD membrane-fusion protein of T1SS JNN61_06105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_06110 PF00196 Bacterial regulatory proteins, luxR family JNN61_06110 PF00072 Response regulator receiver domain JNN61_06115 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_06115 PF00072 Response regulator receiver domain JNN61_06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_06115 PF00512 His Kinase A (phospho-acceptor) domain JNN61_06120 PF02515 CoA-transferase family III JNN61_06125 PF03547 Membrane transport protein JNN61_06130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNN61_06130 PF00205 Thiamine pyrophosphate enzyme, central domain JNN61_06130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_06135 PF02515 CoA-transferase family III JNN61_06140 PF10938 YfdX protein JNN61_06150 PF10810 Protein of unknown function (DUF2545) JNN61_06155 PF03279 Bacterial lipid A biosynthesis acyltransferase JNN61_06165 PF00155 Aminotransferase class I and II JNN61_06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_06170 PF07694 5TMR of 5TMR-LYT JNN61_06170 PF06580 Histidine kinase JNN61_06175 PF00072 Response regulator receiver domain JNN61_06175 PF04397 LytTr DNA-binding domain JNN61_06180 PF12833 Helix-turn-helix domain JNN61_06185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_06185 PF05524 PEP-utilising enzyme, N-terminal JNN61_06185 PF00391 PEP-utilising enzyme, mobile domain JNN61_06185 PF00381 PTS HPr component phosphorylation site JNN61_06185 PF02896 PEP-utilising enzyme, TIM barrel domain JNN61_06190 PF05343 M42 glutamyl aminopeptidase JNN61_06195 PF01321 Creatinase/Prolidase N-terminal domain JNN61_06195 PF00557 Metallopeptidase family M24 JNN61_06200 PF02378 Phosphotransferase system, EIIC JNN61_06205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_06210 PF02685 Glucokinase JNN61_06215 PF00654 Voltage gated chloride channel JNN61_06220 PF10697 Protein of unknown function (DUF2502) JNN61_06225 PF01566 Natural resistance-associated macrophage protein JNN61_06230 PF07662 Na+ dependent nucleoside transporter C-terminus JNN61_06230 PF07670 Nucleoside recognition JNN61_06230 PF01773 Na+ dependent nucleoside transporter N-terminus JNN61_06235 PF00563 EAL domain JNN61_06235 PF05231 MASE1 JNN61_06250 PF07037 Putative transcription regulator (DUF1323) JNN61_06260 PF02371 Transposase IS116/IS110/IS902 family JNN61_06260 PF01548 Transposase JNN61_06270 PF00749 tRNA synthetases class I (E and Q), catalytic domain JNN61_06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_06295 PF03466 LysR substrate binding domain JNN61_06305 PF03825 Nucleoside H+ symporter JNN61_06310 PF01048 Phosphorylase superfamily JNN61_06315 PF03502 Nucleoside-specific channel-forming protein, Tsx JNN61_06320 PF03466 LysR substrate binding domain JNN61_06320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_06325 PF13593 SBF-like CPA transporter family (DUF4137) JNN61_06330 PF12843 Putative quorum-sensing-regulated virulence factor JNN61_06335 PF12826 Helix-hairpin-helix motif JNN61_06335 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JNN61_06335 PF03120 NAD-dependent DNA ligase OB-fold domain JNN61_06335 PF01653 NAD-dependent DNA ligase adenylation domain JNN61_06335 PF00533 BRCA1 C Terminus (BRCT) domain JNN61_06340 PF04354 ZipA, C-terminal FtsZ-binding domain JNN61_06350 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_06355 PF00381 PTS HPr component phosphorylation site JNN61_06360 PF05524 PEP-utilising enzyme, N-terminal JNN61_06360 PF02896 PEP-utilising enzyme, TIM barrel domain JNN61_06360 PF00391 PEP-utilising enzyme, mobile domain JNN61_06365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JNN61_06370 PF08543 Phosphomethylpyrimidine kinase JNN61_06375 PF17263 Family of unknown function (DUF5329) JNN61_06380 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_06385 PF00005 ABC transporter JNN61_06390 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_06395 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_06410 PF01380 SIS domain JNN61_06410 PF01418 Helix-turn-helix domain, rpiR family JNN61_06415 PF01380 SIS domain JNN61_06420 PF00367 phosphotransferase system, EIIB JNN61_06420 PF02378 Phosphotransferase system, EIIC JNN61_06425 PF00144 Beta-lactamase JNN61_06430 PF04261 Dyp-type peroxidase family JNN61_06435 PF06572 Protein of unknown function (DUF1131) JNN61_06440 PF11143 Protein of unknown function (DUF2919) JNN61_06445 PF00583 Acetyltransferase (GNAT) family JNN61_06450 PF01520 N-acetylmuramoyl-L-alanine amidase JNN61_06455 PF01218 Coproporphyrinogen III oxidase JNN61_06460 PF12833 Helix-turn-helix domain JNN61_06465 PF16365 Ethanolamine utilization protein EutK C-terminus JNN61_06465 PF00936 BMC domain JNN61_06470 PF00936 BMC domain JNN61_06475 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JNN61_06480 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JNN61_06485 PF06277 Ethanolamine utilisation protein EutA JNN61_06490 PF04346 Ethanolamine utilisation protein, EutH JNN61_06495 PF00465 Iron-containing alcohol dehydrogenase JNN61_06505 PF00171 Aldehyde dehydrogenase family JNN61_06510 PF03319 Ethanolamine utilisation protein EutN/carboxysome JNN61_06515 PF00936 BMC domain JNN61_06520 PF01515 Phosphate acetyl/butaryl transferase JNN61_06525 PF01923 Cobalamin adenosyltransferase JNN61_06530 PF06249 Ethanolamine utilisation protein EutQ JNN61_06535 PF10662 Ethanolamine utilisation - propanediol utilisation JNN61_06540 PF00936 BMC domain JNN61_06545 PF01515 Phosphate acetyl/butaryl transferase JNN61_06545 PF03949 Malic enzyme, NAD binding domain JNN61_06545 PF00390 Malic enzyme, N-terminal domain JNN61_06550 PF00923 Transaldolase/Fructose-6-phosphate aldolase JNN61_06555 PF02779 Transketolase, pyrimidine binding domain JNN61_06555 PF02780 Transketolase, C-terminal domain JNN61_06555 PF00456 Transketolase, thiamine diphosphate binding domain JNN61_06560 PF06674 Protein of unknown function (DUF1176) JNN61_06565 PF00293 NUDIX domain JNN61_06570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JNN61_06570 PF13247 4Fe-4S dicluster domain JNN61_06570 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_06575 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JNN61_06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_06575 PF00672 HAMP domain JNN61_06575 PF07730 Histidine kinase JNN61_06580 PF00873 AcrB/AcrD/AcrF family JNN61_06590 PF03960 ArsC family JNN61_06595 PF07687 Peptidase dimerisation domain JNN61_06595 PF01546 Peptidase family M20/M25/M40 JNN61_06600 PF13980 Uncharacterised protein family (UPF0370) JNN61_06605 PF02230 Phospholipase/Carboxylesterase JNN61_06610 PF05127 Helicase JNN61_06610 PF17176 tRNA-binding domain JNN61_06610 PF13718 GNAT acetyltransferase 2 JNN61_06610 PF08351 Domain of unknown function (DUF1726) JNN61_06615 PF04228 Putative neutral zinc metallopeptidase JNN61_06620 PF01259 SAICAR synthetase JNN61_06625 PF06804 NlpB/DapX lipoprotein JNN61_06630 PF00701 Dihydrodipicolinate synthetase family JNN61_06635 PF01842 ACT domain JNN61_06640 PF00578 AhpC/TSA family JNN61_06645 PF12798 4Fe-4S binding domain JNN61_06645 PF00037 4Fe-4S binding domain JNN61_06650 PF00361 Proton-conducting membrane transporter JNN61_06655 PF00146 NADH dehydrogenase JNN61_06660 PF00361 Proton-conducting membrane transporter JNN61_06660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JNN61_06665 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JNN61_06670 PF00361 Proton-conducting membrane transporter JNN61_06670 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JNN61_06675 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JNN61_06675 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JNN61_06675 PF00374 Nickel-dependent hydrogenase JNN61_06680 PF12838 4Fe-4S dicluster domain JNN61_06685 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JNN61_06690 PF07450 Formate hydrogenlyase maturation protein HycH JNN61_06695 PF01590 GAF domain JNN61_06695 PF00158 Sigma-54 interaction domain JNN61_06700 PF01226 Formate/nitrite transporter JNN61_06705 PF01594 AI-2E family transporter JNN61_06710 PF01435 Peptidase family M48 JNN61_06715 PF03960 ArsC family JNN61_06720 PF00308 Bacterial dnaA protein JNN61_06725 PF00860 Permease family JNN61_06735 PF02769 AIR synthase related protein, C-terminal domain JNN61_06735 PF00586 AIR synthase related protein, N-terminal domain JNN61_06740 PF00551 Formyl transferase JNN61_06745 PF17941 Polyphosphate kinase C-terminal domain 1 JNN61_06745 PF13089 Polyphosphate kinase N-terminal domain JNN61_06745 PF13090 Polyphosphate kinase C-terminal domain 2 JNN61_06745 PF02503 Polyphosphate kinase middle domain JNN61_06750 PF02541 Ppx/GppA phosphatase family JNN61_06755 PF05231 MASE1 JNN61_06755 PF00563 EAL domain JNN61_06765 PF11119 Protein of unknown function (DUF2633) JNN61_06770 PF05433 Glycine zipper 2TM domain JNN61_06775 PF17358 Family of unknown function (DUF5384) JNN61_06780 PF00117 Glutamine amidotransferase class-I JNN61_06780 PF02540 NAD synthase JNN61_06780 PF00958 GMP synthase C terminal domain JNN61_06785 PF00478 IMP dehydrogenase / GMP reductase domain JNN61_06785 PF00571 CBS domain JNN61_06790 PF13742 OB-fold nucleic acid binding domain JNN61_06790 PF02601 Exonuclease VII, large subunit JNN61_06795 PF07191 zinc-ribbons JNN61_06800 PF01926 50S ribosome-binding GTPase JNN61_06800 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JNN61_06805 PF13360 PQQ-like domain JNN61_06810 PF09976 Tetratricopeptide repeat-like domain JNN61_06815 PF03129 Anticodon binding domain JNN61_06815 PF13393 Histidyl-tRNA synthetase JNN61_06820 PF04551 GcpE protein JNN61_06825 PF13464 Domain of unknown function (DUF4115) JNN61_06830 PF04055 Radical SAM superfamily JNN61_06835 PF00334 Nucleoside diphosphate kinase JNN61_06840 PF06832 Penicillin-Binding Protein C-terminus Family JNN61_06840 PF00912 Transglycosylase JNN61_06840 PF00905 Penicillin binding protein transpeptidase domain JNN61_06845 PF07678 A-macroglobulin TED domain JNN61_06845 PF01835 MG2 domain JNN61_06845 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JNN61_06845 PF07703 Alpha-2-macroglobulin bait region domain JNN61_06845 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JNN61_06845 PF00207 Alpha-2-macroglobulin family JNN61_06845 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JNN61_06845 PF17962 Bacterial macroglobulin domain 6 JNN61_06845 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JNN61_06850 PF00581 Rhodanese-like domain JNN61_06855 PF07179 SseB protein N-terminal domain JNN61_06855 PF14581 SseB protein C-terminal domain JNN61_06860 PF00883 Cytosol aminopeptidase family, catalytic domain JNN61_06860 PF12404 Peptidase JNN61_06865 PF04384 Iron-sulphur cluster assembly JNN61_06870 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_06875 PF00012 Hsp70 protein JNN61_06880 PF07743 HSCB C-terminal oligomerisation domain JNN61_06885 PF01521 Iron-sulphur cluster biosynthesis JNN61_06890 PF01592 NifU-like N terminal domain JNN61_06895 PF00266 Aminotransferase class-V JNN61_06900 PF02082 Transcriptional regulator JNN61_06905 PF00588 SpoU rRNA Methylase family JNN61_06910 PF00459 Inositol monophosphatase family JNN61_06915 PF12146 Serine aminopeptidase, S33 JNN61_06920 PF00874 PRD domain JNN61_06925 PF12832 MFS_1 like family JNN61_06930 PF03466 LysR substrate binding domain JNN61_06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_06935 PF00355 Rieske [2Fe-2S] domain JNN61_06935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JNN61_06940 PF00866 Ring hydroxylating beta subunit JNN61_06945 PF00355 Rieske [2Fe-2S] domain JNN61_06950 PF00106 short chain dehydrogenase JNN61_06955 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_06955 PF14759 Reductase C-terminal JNN61_06960 PF07681 DoxX JNN61_06965 PF01263 Aldose 1-epimerase JNN61_06970 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_06970 PF00107 Zinc-binding dehydrogenase JNN61_06975 PF02653 Branched-chain amino acid transport system / permease component JNN61_06980 PF00005 ABC transporter JNN61_06985 PF13407 Periplasmic binding protein domain JNN61_06990 PF17128 Domain of unknown function (DUF5107) JNN61_06990 PF13181 Tetratricopeptide repeat JNN61_06995 PF00480 ROK family JNN61_07000 PF00464 Serine hydroxymethyltransferase JNN61_07005 PF00970 Oxidoreductase FAD-binding domain JNN61_07005 PF00042 Globin JNN61_07005 PF00175 Oxidoreductase NAD-binding domain JNN61_07010 PF00543 Nitrogen regulatory protein P-II JNN61_07015 PF00158 Sigma-54 interaction domain JNN61_07015 PF00072 Response regulator receiver domain JNN61_07020 PF13942 YfhG lipoprotein JNN61_07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_07025 PF00512 His Kinase A (phospho-acceptor) domain JNN61_07030 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JNN61_07030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JNN61_07030 PF02769 AIR synthase related protein, C-terminal domain JNN61_07035 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_07035 PF01464 Transglycosylase SLT domain JNN61_07040 PF14437 MafB19-like deaminase JNN61_07050 PF01418 Helix-turn-helix domain, rpiR family JNN61_07050 PF01380 SIS domain JNN61_07055 PF12838 4Fe-4S dicluster domain JNN61_07065 PF01648 4'-phosphopantetheinyl transferase superfamily JNN61_07070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JNN61_07075 PF02565 Recombination protein O C terminal JNN61_07075 PF11967 Recombination protein O N terminal JNN61_07080 PF01926 50S ribosome-binding GTPase JNN61_07080 PF07650 KH domain JNN61_07085 PF00035 Double-stranded RNA binding motif JNN61_07085 PF14622 Ribonuclease-III-like JNN61_07090 PF10502 Signal peptidase, peptidase S26 JNN61_07095 PF00679 Elongation factor G C-terminus JNN61_07095 PF03144 Elongation factor Tu domain 2 JNN61_07095 PF06421 GTP-binding protein LepA C-terminus JNN61_07095 PF00009 Elongation factor Tu GTP binding domain JNN61_07105 PF03888 MucB/RseB N-terminal domain JNN61_07105 PF17188 MucB/RseB C-terminal domain JNN61_07110 PF03873 Anti sigma-E protein RseA, C-terminal domain JNN61_07110 PF03872 Anti sigma-E protein RseA, N-terminal domain JNN61_07115 PF08281 Sigma-70, region 4 JNN61_07115 PF04542 Sigma-70 region 2 JNN61_07125 PF00890 FAD binding domain JNN61_07125 PF02910 Fumarate reductase flavoprotein C-term JNN61_07130 PF05175 Methyltransferase small domain JNN61_07135 PF00270 DEAD/DEAH box helicase JNN61_07135 PF00271 Helicase conserved C-terminal domain JNN61_07140 PF03466 LysR substrate binding domain JNN61_07140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_07145 PF01810 LysE type translocator JNN61_07150 PF01228 Glycine radical JNN61_07155 PF03167 Uracil DNA glycosylase superfamily JNN61_07160 PF00588 SpoU rRNA Methylase family JNN61_07160 PF08032 RNA 2'-O ribose methyltransferase substrate binding JNN61_07165 PF00085 Thioredoxin JNN61_07175 PF00583 Acetyltransferase (GNAT) family JNN61_07175 PF13607 Succinyl-CoA ligase like flavodoxin domain JNN61_07175 PF13380 CoA binding domain JNN61_07180 PF13091 PLD-like domain JNN61_07185 PF10043 Predicted periplasmic lipoprotein (DUF2279) JNN61_07190 PF00083 Sugar (and other) transporter JNN61_07220 PF07724 AAA domain (Cdc48 subfamily) JNN61_07220 PF17871 AAA lid domain JNN61_07220 PF02861 Clp amino terminal domain, pathogenicity island component JNN61_07220 PF10431 C-terminal, D2-small domain, of ClpB protein JNN61_07220 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_07225 PF02578 Multi-copper polyphenol oxidoreductase laccase JNN61_07230 PF00849 RNA pseudouridylate synthase JNN61_07230 PF01479 S4 domain JNN61_07235 PF13525 Outer membrane lipoprotein JNN61_07240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JNN61_07250 PF00800 Prephenate dehydratase JNN61_07250 PF01817 Chorismate mutase type II JNN61_07255 PF01817 Chorismate mutase type II JNN61_07255 PF02153 Prephenate dehydrogenase JNN61_07260 PF00793 DAHP synthetase I family JNN61_07265 PF10973 Protein of unknown function (DUF2799) JNN61_07270 PF13689 YfiR/HmsC-like JNN61_07275 PF00990 Diguanylate cyclase, GGDEF domain JNN61_07275 PF17152 Periplasmic sensor domain JNN61_07280 PF00691 OmpA family JNN61_07285 PF01245 Ribosomal protein L19 JNN61_07290 PF01746 tRNA (Guanine-1)-methyltransferase JNN61_07295 PF05239 PRC-barrel domain JNN61_07295 PF01782 RimM N-terminal domain JNN61_07300 PF00886 Ribosomal protein S16 JNN61_07305 PF02978 Signal peptide binding domain JNN61_07305 PF02881 SRP54-type protein, helical bundle domain JNN61_07305 PF00448 SRP54-type protein, GTPase domain JNN61_07310 PF01578 Cytochrome C assembly protein JNN61_07315 PF01595 Cyclin M transmembrane N-terminal domain JNN61_07315 PF03471 Transporter associated domain JNN61_07315 PF00571 CBS domain JNN61_07320 PF01025 GrpE JNN61_07325 PF01513 ATP-NAD kinase JNN61_07330 PF02463 RecF/RecN/SMC N terminal domain JNN61_07335 PF04355 SmpA / OmlA family JNN61_07340 PF03658 RnfH family Ubiquitin JNN61_07345 PF03364 Polyketide cyclase / dehydrase and lipid transport JNN61_07350 PF01668 SmpB protein JNN61_07360 PF03212 Pertactin JNN61_07360 PF03797 Autotransporter beta-domain JNN61_07360 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_07375 PF17621 Family of unknown function (DUF5508) JNN61_07385 PF00128 Alpha amylase, catalytic domain JNN61_07390 PF08943 CsiD JNN61_07395 PF01266 FAD dependent oxidoreductase JNN61_07400 PF00171 Aldehyde dehydrogenase family JNN61_07405 PF00202 Aminotransferase class-III JNN61_07410 PF00324 Amino acid permease JNN61_07415 PF00392 Bacterial regulatory proteins, gntR family JNN61_07415 PF07729 FCD domain JNN61_07420 PF01476 LysM domain JNN61_07420 PF04972 BON domain JNN61_07425 PF01679 Proteolipid membrane potential modulator JNN61_07430 PF01022 Bacterial regulatory protein, arsR family JNN61_07435 PF00581 Rhodanese-like domain JNN61_07435 PF11127 Protein of unknown function (DUF2892) JNN61_07440 PF00816 H-NS histone family JNN61_07445 PF06610 L-alanine exporter JNN61_07450 PF09400 Protein of unknown function (DUF2002) JNN61_07455 PF05957 Bacterial protein of unknown function (DUF883) JNN61_07460 PF00155 Aminotransferase class I and II JNN61_07460 PF00392 Bacterial regulatory proteins, gntR family JNN61_07465 PF02627 Carboxymuconolactone decarboxylase family JNN61_07470 PF00462 Glutaredoxin JNN61_07475 PF07972 NrdI Flavodoxin like JNN61_07480 PF02867 Ribonucleotide reductase, barrel domain JNN61_07480 PF08343 Ribonucleotide reductase N-terminal JNN61_07480 PF00317 Ribonucleotide reductase, all-alpha domain JNN61_07485 PF00268 Ribonucleotide reductase, small chain JNN61_07490 PF00571 CBS domain JNN61_07490 PF00005 ABC transporter JNN61_07495 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_07500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNN61_07505 PF07690 Major Facilitator Superfamily JNN61_07510 PF03591 AzlC protein JNN61_07515 PF05437 Branched-chain amino acid transport protein (AzlD) JNN61_07520 PF01047 MarR family JNN61_07525 PF00529 HlyD membrane-fusion protein of T1SS JNN61_07525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_07530 PF07690 Major Facilitator Superfamily JNN61_07535 PF02664 S-Ribosylhomocysteinase (LuxS) JNN61_07540 PF04262 Glutamate-cysteine ligase JNN61_07545 PF09335 SNARE associated Golgi protein JNN61_07550 PF13419 Haloacid dehalogenase-like hydrolase JNN61_07580 PF02599 Global regulator protein family JNN61_07585 PF01411 tRNA synthetases class II (A) JNN61_07585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNN61_07585 PF02272 DHHA1 domain JNN61_07590 PF02631 RecX family JNN61_07595 PF00154 recA bacterial DNA recombination protein JNN61_07600 PF02464 Competence-damaged protein JNN61_07605 PF13406 Transglycosylase SLT domain JNN61_07610 PF03608 PTS system enzyme II sorbitol-specific factor JNN61_07615 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JNN61_07615 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JNN61_07620 PF03829 PTS system glucitol/sorbitol-specific IIA component JNN61_07625 PF00106 short chain dehydrogenase JNN61_07630 PF06923 Glucitol operon activator protein (GutM) JNN61_07635 PF00455 DeoR C terminal sensor domain JNN61_07635 PF08220 DeoR-like helix-turn-helix domain JNN61_07640 PF01380 SIS domain JNN61_07640 PF00571 CBS domain JNN61_07645 PF00158 Sigma-54 interaction domain JNN61_07645 PF01590 GAF domain JNN61_07650 PF00258 Flavodoxin JNN61_07650 PF00753 Metallo-beta-lactamase superfamily JNN61_07650 PF00301 Rubredoxin JNN61_07655 PF18113 Rubredoxin binding C-terminal domain JNN61_07655 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_07660 PF17788 HypF Kae1-like domain JNN61_07660 PF01300 Telomere recombination JNN61_07660 PF07503 HypF finger JNN61_07660 PF00708 Acylphosphatase JNN61_07665 PF13247 4Fe-4S dicluster domain JNN61_07665 PF12800 4Fe-4S binding domain JNN61_07670 PF00356 Bacterial regulatory proteins, lacI family JNN61_07675 PF00367 phosphotransferase system, EIIB JNN61_07675 PF02378 Phosphotransferase system, EIIC JNN61_07680 PF00232 Glycosyl hydrolase family 1 JNN61_07685 PF01381 Helix-turn-helix JNN61_07690 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system JNN61_07695 PF01750 Hydrogenase maturation protease JNN61_07700 PF07450 Formate hydrogenlyase maturation protein HycH JNN61_07705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JNN61_07710 PF12838 4Fe-4S dicluster domain JNN61_07715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JNN61_07715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JNN61_07715 PF00374 Nickel-dependent hydrogenase JNN61_07720 PF00146 NADH dehydrogenase JNN61_07725 PF00361 Proton-conducting membrane transporter JNN61_07730 PF13247 4Fe-4S dicluster domain JNN61_07735 PF11046 Transcriptional repressor of hyc and hyp operons JNN61_07740 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JNN61_07745 PF02492 CobW/HypB/UreG, nucleotide-binding domain JNN61_07750 PF01455 HupF/HypC family JNN61_07755 PF01924 Hydrogenase formation hypA family JNN61_07760 PF02769 AIR synthase related protein, C-terminal domain JNN61_07760 PF00586 AIR synthase related protein, N-terminal domain JNN61_07765 PF00158 Sigma-54 interaction domain JNN61_07765 PF01590 GAF domain JNN61_07775 PF11756 Nitrous oxide-stimulated promoter JNN61_07785 PF01624 MutS domain I JNN61_07785 PF05192 MutS domain III JNN61_07785 PF05188 MutS domain II JNN61_07785 PF05190 MutS family domain IV JNN61_07785 PF00488 MutS domain V JNN61_07790 PF00149 Calcineurin-like phosphoesterase JNN61_07795 PF08220 DeoR-like helix-turn-helix domain JNN61_07795 PF00455 DeoR C terminal sensor domain JNN61_07800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNN61_07800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNN61_07805 PF07005 Sugar-binding N-terminal domain JNN61_07805 PF17042 Nucleotide-binding C-terminal domain JNN61_07810 PF00596 Class II Aldolase and Adducin N-terminal domain JNN61_07815 PF01261 Xylose isomerase-like TIM barrel JNN61_07820 PF02447 GntP family permease JNN61_07830 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JNN61_07835 PF02441 Flavoprotein JNN61_07840 PF01047 MarR family JNN61_07845 PF00140 Sigma-70 factor, region 1.2 JNN61_07845 PF04539 Sigma-70 region 3 JNN61_07845 PF04545 Sigma-70, region 4 JNN61_07845 PF04542 Sigma-70 region 2 JNN61_07850 PF01476 LysM domain JNN61_07850 PF01551 Peptidase family M23 JNN61_07860 PF01975 Survival protein SurE JNN61_07865 PF01142 tRNA pseudouridine synthase D (TruD) JNN61_07870 PF02542 YgbB family JNN61_07875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JNN61_07880 PF04977 Septum formation initiator JNN61_07885 PF12084 Protein of unknown function (DUF3561) JNN61_07895 PF00009 Elongation factor Tu GTP binding domain JNN61_07900 PF01507 Phosphoadenosine phosphosulfate reductase family JNN61_07905 PF04389 Peptidase family M28 JNN61_07910 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) JNN61_07915 PF01867 CRISPR associated protein Cas1 JNN61_07925 PF09704 CRISPR-associated protein (Cas_Cas5) JNN61_07930 PF09344 CT1975-like protein JNN61_07940 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) JNN61_07945 PF00270 DEAD/DEAH box helicase JNN61_07945 PF18019 HD domain JNN61_07945 PF00271 Helicase conserved C-terminal domain JNN61_07950 PF01848 Hok/gef family JNN61_07955 PF01507 Phosphoadenosine phosphosulfate reductase family JNN61_07960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JNN61_07960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JNN61_07965 PF00175 Oxidoreductase NAD-binding domain JNN61_07965 PF00258 Flavodoxin JNN61_07965 PF00667 FAD binding domain JNN61_07970 PF01242 6-pyruvoyl tetrahydropterin synthase JNN61_07975 PF01266 FAD dependent oxidoreductase JNN61_07985 PF04309 Glycerol-3-phosphate responsive antiterminator JNN61_07995 PF01012 Electron transfer flavoprotein domain JNN61_07995 PF00766 Electron transfer flavoprotein FAD-binding domain JNN61_08000 PF01012 Electron transfer flavoprotein domain JNN61_08005 PF00083 Sugar (and other) transporter JNN61_08010 PF02913 FAD linked oxidases, C-terminal domain JNN61_08010 PF01565 FAD binding domain JNN61_08020 PF07690 Major Facilitator Superfamily JNN61_08025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_08025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_08030 PF04055 Radical SAM superfamily JNN61_08040 PF04536 TPM domain JNN61_08045 PF00113 Enolase, C-terminal TIM barrel domain JNN61_08045 PF03952 Enolase, N-terminal domain JNN61_08050 PF00117 Glutamine amidotransferase class-I JNN61_08050 PF06418 CTP synthase N-terminus JNN61_08055 PF03819 MazG nucleotide pyrophosphohydrolase domain JNN61_08060 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JNN61_08065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JNN61_08070 PF04607 Region found in RelA / SpoT proteins JNN61_08070 PF13291 ACT domain JNN61_08070 PF02824 TGS domain JNN61_08075 PF01938 TRAM domain JNN61_08075 PF05958 tRNA (Uracil-5-)-methyltransferase JNN61_08080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JNN61_08080 PF00072 Response regulator receiver domain JNN61_08080 PF00512 His Kinase A (phospho-acceptor) domain JNN61_08080 PF00672 HAMP domain JNN61_08080 PF01627 Hpt domain JNN61_08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_08085 PF13378 Enolase C-terminal domain-like JNN61_08090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNN61_08090 PF13378 Enolase C-terminal domain-like JNN61_08095 PF07690 Major Facilitator Superfamily JNN61_08100 PF00258 Flavodoxin JNN61_08105 PF00849 RNA pseudouridylate synthase JNN61_08110 PF04287 tRNA pseudouridine synthase C JNN61_08115 PF07348 Syd protein (SUKH-2) JNN61_08120 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JNN61_08120 PF14489 QueF-like protein JNN61_08125 PF11892 Domain of unknown function (DUF3412) JNN61_08125 PF03641 Possible lysine decarboxylase JNN61_08125 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JNN61_08135 PF03313 Serine dehydratase alpha chain JNN61_08135 PF03315 Serine dehydratase beta chain JNN61_08140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JNN61_08140 PF01367 5'-3' exonuclease, C-terminal SAM fold JNN61_08145 PF00465 Iron-containing alcohol dehydrogenase JNN61_08150 PF00596 Class II Aldolase and Adducin N-terminal domain JNN61_08155 PF07690 Major Facilitator Superfamily JNN61_08160 PF02952 L-fucose isomerase, C-terminal domain JNN61_08160 PF07881 L-fucose isomerase, first N-terminal domain JNN61_08160 PF07882 L-fucose isomerase, second N-terminal domain JNN61_08165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_08165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_08170 PF05025 RbsD / FucU transport protein family JNN61_08175 PF08220 DeoR-like helix-turn-helix domain JNN61_08175 PF00455 DeoR C terminal sensor domain JNN61_08180 PF18125 RlmM ferredoxin-like domain JNN61_08180 PF01728 FtsJ-like methyltransferase JNN61_08185 PF04241 Protein of unknown function (DUF423) JNN61_08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_08190 PF03466 LysR substrate binding domain JNN61_08195 PF06004 Bacterial protein of unknown function (DUF903) JNN61_08200 PF00266 Aminotransferase class-V JNN61_08205 PF02657 Fe-S metabolism associated domain JNN61_08210 PF00899 ThiF family JNN61_08215 PF06725 3D domain JNN61_08215 PF03562 MltA specific insert domain JNN61_08235 PF11741 AMIN domain JNN61_08235 PF01520 N-acetylmuramoyl-L-alanine amidase JNN61_08240 PF00583 Acetyltransferase (GNAT) family JNN61_08240 PF00696 Amino acid kinase family JNN61_08245 PF13538 UvrD-like helicase C-terminal domain JNN61_08250 PF12705 PD-(D/E)XK nuclease superfamily JNN61_08250 PF00580 UvrD/REP helicase N-terminal domain JNN61_08250 PF13361 UvrD-like helicase C-terminal domain JNN61_08255 PF16187 Middle or third domain of peptidase_M16 JNN61_08255 PF05193 Peptidase M16 inactive domain JNN61_08255 PF00675 Insulinase (Peptidase family M16) JNN61_08260 PF17946 RecC C-terminal domain JNN61_08265 PF07963 Prokaryotic N-terminal methylation motif JNN61_08265 PF12528 Type II secretion prepilin peptidase dependent protein C JNN61_08270 PF10713 Protein of unknown function (DUF2509) JNN61_08275 PF07963 Prokaryotic N-terminal methylation motif JNN61_08280 PF07963 Prokaryotic N-terminal methylation motif JNN61_08285 PF00303 Thymidylate synthase JNN61_08290 PF01790 Prolipoprotein diacylglyceryl transferase JNN61_08295 PF02896 PEP-utilising enzyme, TIM barrel domain JNN61_08295 PF00391 PEP-utilising enzyme, mobile domain JNN61_08295 PF01590 GAF domain JNN61_08295 PF05524 PEP-utilising enzyme, N-terminal JNN61_08300 PF00293 NUDIX domain JNN61_08305 PF02976 DNA mismatch repair enzyme MutH JNN61_08310 PF03741 Integral membrane protein TerC family JNN61_08315 PF06004 Bacterial protein of unknown function (DUF903) JNN61_08320 PF00248 Aldo/keto reductase family JNN61_08325 PF07690 Major Facilitator Superfamily JNN61_08330 PF00501 AMP-binding enzyme JNN61_08330 PF01553 Acyltransferase JNN61_08335 PF00356 Bacterial regulatory proteins, lacI family JNN61_08340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JNN61_08340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JNN61_08345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_08345 PF03466 LysR substrate binding domain JNN61_08350 PF01177 Asp/Glu/Hydantoin racemase JNN61_08355 PF00083 Sugar (and other) transporter JNN61_08365 PF04962 KduI/IolB family JNN61_08370 PF00108 Thiolase, N-terminal domain JNN61_08370 PF02803 Thiolase, C-terminal domain JNN61_08375 PF03222 Tryptophan/tyrosine permease family JNN61_08385 PF01551 Peptidase family M23 JNN61_08385 PF01476 LysM domain JNN61_08390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JNN61_08390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JNN61_08395 PF00941 FAD binding domain in molybdopterin dehydrogenase JNN61_08395 PF03450 CO dehydrogenase flavoprotein C-terminal domain JNN61_08400 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_08400 PF01799 [2Fe-2S] binding domain JNN61_08405 PF13188 PAS domain JNN61_08405 PF00158 Sigma-54 interaction domain JNN61_08405 PF02954 Bacterial regulatory protein, Fis family JNN61_08410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JNN61_08410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JNN61_08415 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_08420 PF07687 Peptidase dimerisation domain JNN61_08420 PF01546 Peptidase family M20/M25/M40 JNN61_08425 PF01979 Amidohydrolase family JNN61_08430 PF00696 Amino acid kinase family JNN61_08435 PF02625 XdhC and CoxI family JNN61_08435 PF13478 XdhC Rossmann domain JNN61_08445 PF12804 MobA-like NTP transferase domain JNN61_08450 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JNN61_08450 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_08455 PF01979 Amidohydrolase family JNN61_08460 PF00941 FAD binding domain in molybdopterin dehydrogenase JNN61_08465 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JNN61_08465 PF01799 [2Fe-2S] binding domain JNN61_08465 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JNN61_08470 PF00860 Permease family JNN61_08475 PF01979 Amidohydrolase family JNN61_08480 PF00860 Permease family JNN61_08485 PF13247 4Fe-4S dicluster domain JNN61_08490 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_08490 PF13247 4Fe-4S dicluster domain JNN61_08490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JNN61_08495 PF00860 Permease family JNN61_08510 PF00293 NUDIX domain JNN61_08515 PF00152 tRNA synthetases class II (D, K and N) JNN61_08515 PF01336 OB-fold nucleic acid binding domain JNN61_08525 PF02272 DHHA1 domain JNN61_08525 PF01368 DHH family JNN61_08525 PF17768 RecJ OB domain JNN61_08530 PF13098 Thioredoxin-like domain JNN61_08530 PF10411 Disulfide bond isomerase protein N-terminus JNN61_08535 PF00589 Phage integrase family JNN61_08535 PF02899 Phage integrase, N-terminal SAM-like domain JNN61_08540 PF00258 Flavodoxin JNN61_08545 PF07254 Membrane-bound toxin component of toxin-antitoxin system JNN61_08550 PF03937 Flavinator of succinate dehydrogenase JNN61_08555 PF01571 Aminomethyltransferase folate-binding domain JNN61_08560 PF03006 Haemolysin-III related JNN61_08565 PF04266 ASCH domain JNN61_08570 PF00232 Glycosyl hydrolase family 1 JNN61_08575 PF02347 Glycine cleavage system P-protein JNN61_08580 PF01597 Glycine cleavage H-protein JNN61_08585 PF01571 Aminomethyltransferase folate-binding domain JNN61_08585 PF08669 Glycine cleavage T-protein C-terminal barrel domain JNN61_08595 PF01494 FAD binding domain JNN61_08600 PF01494 FAD binding domain JNN61_08605 PF05195 Aminopeptidase P, N-terminal domain JNN61_08605 PF00557 Metallopeptidase family M24 JNN61_08610 PF03695 Uncharacterised protein family (UPF0149) JNN61_08615 PF05164 Cell division protein ZapA JNN61_08625 PF01812 5-formyltetrahydrofolate cyclo-ligase family JNN61_08635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNN61_08635 PF01842 ACT domain JNN61_08635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNN61_08640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JNN61_08645 PF03466 LysR substrate binding domain JNN61_08650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_08650 PF03466 LysR substrate binding domain JNN61_08655 PF02310 B12 binding domain JNN61_08655 PF01642 Methylmalonyl-CoA mutase JNN61_08665 PF04402 Protein of unknown function (DUF541) JNN61_08670 PF01810 LysE type translocator JNN61_08675 PF05552 Conserved TM helix JNN61_08675 PF00924 Mechanosensitive ion channel JNN61_08680 PF01116 Fructose-bisphosphate aldolase class-II JNN61_08685 PF00162 Phosphoglycerate kinase JNN61_08690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JNN61_08690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JNN61_08710 PF00005 ABC transporter JNN61_08715 PF00005 ABC transporter JNN61_08725 PF05068 Mannitol repressor JNN61_08730 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JNN61_08735 PF00107 Zinc-binding dehydrogenase JNN61_08735 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_08740 PF02378 Phosphotransferase system, EIIC JNN61_08740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_08745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_08750 PF01145 SPFH domain / Band 7 family JNN61_08755 PF02780 Transketolase, C-terminal domain JNN61_08755 PF02779 Transketolase, pyrimidine binding domain JNN61_08755 PF00456 Transketolase, thiamine diphosphate binding domain JNN61_08760 PF01435 Peptidase family M48 JNN61_08765 PF00491 Arginase family JNN61_08775 PF17810 Arginine decarboxylase helical bundle domain JNN61_08775 PF17944 Arginine decarboxylase C-terminal helical extension JNN61_08775 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JNN61_08780 PF11036 Virulence promoting factor JNN61_08785 PF17430 Uncharacterized YqgC-like JNN61_08790 PF02773 S-adenosylmethionine synthetase, C-terminal domain JNN61_08790 PF02772 S-adenosylmethionine synthetase, central domain JNN61_08790 PF00438 S-adenosylmethionine synthetase, N-terminal domain JNN61_08795 PF00083 Sugar (and other) transporter JNN61_08800 PF10263 SprT-like family JNN61_08800 PF17283 SprT-like zinc ribbon domain JNN61_08805 PF04231 Endonuclease I JNN61_08810 PF04452 RNA methyltransferase JNN61_08815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JNN61_08815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JNN61_08820 PF02622 Uncharacterized ACR, COG1678 JNN61_08825 PF03652 Holliday junction resolvase JNN61_08830 PF00437 Type II/IV secretion system protein JNN61_08835 PF01168 Alanine racemase, N-terminal domain JNN61_08840 PF02325 YGGT family JNN61_08845 PF02594 Uncharacterised ACR, YggU family COG1872 JNN61_08850 PF01725 Ham1 family JNN61_08855 PF06969 HemN C-terminal domain JNN61_08855 PF04055 Radical SAM superfamily JNN61_08860 PF03480 Bacterial extracellular solute-binding protein, family 7 JNN61_08865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JNN61_08870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JNN61_08875 PF06717 Protein of unknown function (DUF1202) JNN61_08880 PF00710 Asparaginase, N-terminal JNN61_08880 PF17763 Glutaminase/Asparaginase C-terminal domain JNN61_08885 PF11101 Protein of unknown function (DUF2884) JNN61_08895 PF04320 Protein with unknown function (DUF469) JNN61_08900 PF02390 Putative methyltransferase JNN61_08905 PF00633 Helix-hairpin-helix motif JNN61_08905 PF10576 Iron-sulfur binding domain of endonuclease III JNN61_08905 PF14815 NUDIX domain JNN61_08905 PF00730 HhH-GPD superfamily base excision DNA repair protein JNN61_08910 PF04362 Bacterial Fe(2+) trafficking JNN61_08915 PF01464 Transglycosylase SLT domain JNN61_08915 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JNN61_08920 PF03825 Nucleoside H+ symporter JNN61_08925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JNN61_08925 PF01276 Orn/Lys/Arg decarboxylase, major domain JNN61_08925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNN61_08930 PF04474 Protein of unknown function (DUF554) JNN61_08940 PF13356 Arm DNA-binding domain JNN61_08940 PF00589 Phage integrase family JNN61_08955 PF01047 MarR family JNN61_08975 PF04703 FaeA-like protein JNN61_08985 PF03245 Bacteriophage Rz lysis protein JNN61_09020 PF06276 Ferric iron reductase FhuF-like transporter JNN61_09020 PF04183 IucA / IucC family JNN61_09040 PF04183 IucA / IucC family JNN61_09040 PF06276 Ferric iron reductase FhuF-like transporter JNN61_09045 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JNN61_09050 PF07715 TonB-dependent Receptor Plug Domain JNN61_09050 PF00593 TonB dependent receptor JNN61_09060 PF03797 Autotransporter beta-domain JNN61_09060 PF13018 Extended Signal Peptide of Type V secretion system JNN61_09060 PF02395 Immunoglobulin A1 protease JNN61_09070 PF13936 Helix-turn-helix domain JNN61_09070 PF00665 Integrase core domain JNN61_09120 PF00593 TonB dependent receptor JNN61_09120 PF07715 TonB-dependent Receptor Plug Domain JNN61_09135 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase JNN61_09140 PF00392 Bacterial regulatory proteins, gntR family JNN61_09140 PF07729 FCD domain JNN61_09145 PF07859 alpha/beta hydrolase fold JNN61_09145 PF13472 GDSL-like Lipase/Acylhydrolase family JNN61_09155 PF06178 Oligogalacturonate-specific porin protein (KdgM) JNN61_09165 PF07690 Major Facilitator Superfamily JNN61_09170 PF00480 ROK family JNN61_09175 PF00701 Dihydrodipicolinate synthetase family JNN61_09180 PF13006 Insertion element 4 transposase N-terminal JNN61_09180 PF01609 Transposase DDE domain JNN61_09190 PF05717 IS66 Orf2 like protein JNN61_09200 PF03050 Transposase IS66 family JNN61_09200 PF13817 IS66 C-terminal element JNN61_09200 PF13007 Transposase C of IS166 homeodomain JNN61_09200 PF13005 zinc-finger binding domain of transposase IS66 JNN61_09220 PF05321 Haemolysin expression modulating protein JNN61_09235 PF13148 Protein of unknown function (DUF3987) JNN61_09245 PF03797 Autotransporter beta-domain JNN61_09245 PF13018 Extended Signal Peptide of Type V secretion system JNN61_09245 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_09260 PF06006 Bacterial protein of unknown function (DUF905) JNN61_09265 PF06067 Domain of unknown function (DUF932) JNN61_09270 PF03230 Antirestriction protein JNN61_09275 PF04002 RadC-like JAB domain JNN61_09280 PF06174 Protein of unknown function (DUF987) JNN61_09290 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JNN61_09295 PF06755 CbtA_toxin of type IV toxin-antitoxin system JNN61_09330 PF00571 CBS domain JNN61_09330 PF01380 SIS domain JNN61_09340 PF10531 SLBB domain JNN61_09340 PF02563 Polysaccharide biosynthesis/export protein JNN61_09345 PF02348 Cytidylyltransferase JNN61_09350 PF05159 Capsule polysaccharide biosynthesis protein JNN61_09355 PF05159 Capsule polysaccharide biosynthesis protein JNN61_09360 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_09375 PF00005 ABC transporter JNN61_09380 PF01061 ABC-2 type transporter JNN61_09385 PF04612 Type II secretion system (T2SS), protein M JNN61_09390 PF12693 GspL periplasmic domain JNN61_09395 PF03934 Type II secretion system (T2SS), protein K JNN61_09400 PF11612 Type II secretion system (T2SS), protein J JNN61_09400 PF07963 Prokaryotic N-terminal methylation motif JNN61_09405 PF02501 Type II secretion system (T2SS), protein I JNN61_09405 PF07963 Prokaryotic N-terminal methylation motif JNN61_09410 PF12019 Type II transport protein GspH JNN61_09415 PF07963 Prokaryotic N-terminal methylation motif JNN61_09415 PF08334 Type II secretion system (T2SS), protein G JNN61_09420 PF00482 Type II secretion system (T2SS), protein F JNN61_09425 PF00437 Type II/IV secretion system protein JNN61_09430 PF00263 Bacterial type II and III secretion system protein JNN61_09430 PF03958 Bacterial type II/III secretion system short domain JNN61_09435 PF00263 Bacterial type II and III secretion system protein JNN61_09435 PF03958 Bacterial type II/III secretion system short domain JNN61_09440 PF11356 Type II secretion system protein C JNN61_09445 PF16549 Type II secretion system (T2SS) pilotin, S protein JNN61_09450 PF06750 Bacterial Peptidase A24 N-terminal domain JNN61_09450 PF01478 Type IV leader peptidase family JNN61_09455 PF13402 Peptidase M60, enhancin and enhancin-like JNN61_09455 PF17291 N-terminal domain of M60-like peptidases JNN61_09455 PF13322 Domain of unknown function (DUF4092) JNN61_09460 PF02652 L-lactate permease JNN61_09465 PF01274 Malate synthase JNN61_09470 PF03928 Haem-degrading JNN61_09475 PF13183 4Fe-4S dicluster domain JNN61_09475 PF02754 Cysteine-rich domain JNN61_09480 PF01565 FAD binding domain JNN61_09485 PF01565 FAD binding domain JNN61_09485 PF02913 FAD linked oxidases, C-terminal domain JNN61_09490 PF07729 FCD domain JNN61_09490 PF00392 Bacterial regulatory proteins, gntR family JNN61_09500 PF00501 AMP-binding enzyme JNN61_09500 PF14535 AMP-binding enzyme C-terminal domain JNN61_09510 PF00550 Phosphopantetheine attachment site JNN61_09515 PF00155 Aminotransferase class I and II JNN61_09525 PF03739 Lipopolysaccharide export system permease LptF/LptG JNN61_09530 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JNN61_09540 PF01943 Polysaccharide biosynthesis protein JNN61_09560 PF01384 Phosphate transporter family JNN61_09565 PF05257 CHAP domain JNN61_09565 PF03738 Glutathionylspermidine synthase preATP-grasp JNN61_09570 PF02798 Glutathione S-transferase, N-terminal domain JNN61_09575 PF01455 HupF/HypC family JNN61_09580 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JNN61_09585 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE JNN61_09590 PF01750 Hydrogenase maturation protease JNN61_09595 PF00374 Nickel-dependent hydrogenase JNN61_09600 PF03916 Polysulphide reductase, NrfD JNN61_09605 PF13247 4Fe-4S dicluster domain JNN61_09610 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JNN61_09610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JNN61_09615 PF11115 Protein of unknown function (DUF2623) JNN61_09620 PF01738 Dienelactone hydrolase family JNN61_09625 PF00248 Aldo/keto reductase family JNN61_09630 PF03350 Uncharacterized protein family, UPF0114 JNN61_09640 PF02472 Biopolymer transport protein ExbD/TolR JNN61_09645 PF01618 MotA/TolQ/ExbB proton channel family JNN61_09650 PF01053 Cys/Met metabolism PLP-dependent enzyme JNN61_09655 PF09335 SNARE associated Golgi protein JNN61_09660 PF12833 Helix-turn-helix domain JNN61_09660 PF06719 AraC-type transcriptional regulator N-terminus JNN61_09665 PF00465 Iron-containing alcohol dehydrogenase JNN61_09670 PF00248 Aldo/keto reductase family JNN61_09675 PF12883 Protein of unknown function (DUF3828) JNN61_09680 PF04728 Lipoprotein leucine-zipper JNN61_09685 PF04055 Radical SAM superfamily JNN61_09685 PF11842 Domain of unknown function (DUF3362) JNN61_09685 PF08497 Radical SAM N-terminal JNN61_09690 PF00394 Multicopper oxidase JNN61_09690 PF07731 Multicopper oxidase JNN61_09690 PF07732 Multicopper oxidase JNN61_09695 PF01553 Acyltransferase JNN61_09700 PF00521 DNA gyrase/topoisomerase IV, subunit A JNN61_09700 PF03989 DNA gyrase C-terminal domain, beta-propeller JNN61_09705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_09710 PF06445 GyrI-like small molecule binding domain JNN61_09715 PF04076 Bacterial OB fold (BOF) protein JNN61_09720 PF00486 Transcriptional regulatory protein, C terminal JNN61_09720 PF00072 Response regulator receiver domain JNN61_09725 PF08521 Two-component sensor kinase N-terminal JNN61_09725 PF00512 His Kinase A (phospho-acceptor) domain JNN61_09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_09730 PF10840 Protein of unknown function (DUF2645) JNN61_09735 PF02525 Flavodoxin-like fold JNN61_09740 PF03992 Antibiotic biosynthesis monooxygenase JNN61_09745 PF01380 SIS domain JNN61_09745 PF01418 Helix-turn-helix domain, rpiR family JNN61_09755 PF01032 FecCD transport family JNN61_09760 PF01032 FecCD transport family JNN61_09765 PF00005 ABC transporter JNN61_09770 PF07715 TonB-dependent Receptor Plug Domain JNN61_09775 PF01751 Toprim domain JNN61_09775 PF00204 DNA gyrase B JNN61_09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_09775 PF00986 DNA gyrase B subunit, carboxyl terminus JNN61_09780 PF05728 Uncharacterised protein family (UPF0227) JNN61_09785 PF00149 Calcineurin-like phosphoesterase JNN61_09790 PF06853 Protein of unknown function (DUF1249) JNN61_09795 PF00293 NUDIX domain JNN61_09800 PF02321 Outer membrane efflux protein JNN61_09805 PF06693 Protein of unknown function (DUF1190) JNN61_09810 PF03738 Glutathionylspermidine synthase preATP-grasp JNN61_09815 PF05935 Arylsulfotransferase (ASST) JNN61_09815 PF17425 Arylsulfotransferase Ig-like domain JNN61_09820 PF01323 DSBA-like thioredoxin domain JNN61_09825 PF02600 Disulfide bond formation protein DsbB JNN61_09830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JNN61_09835 PF02535 ZIP Zinc transporter JNN61_09845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JNN61_09850 PF04380 Membrane fusogenic activity JNN61_09855 PF08971 Glycogen synthesis protein JNN61_09860 PF07290 Protein of unknown function (DUF1449) JNN61_09865 PF01145 SPFH domain / Band 7 family JNN61_09865 PF15975 Flotillin JNN61_09880 PF00294 pfkB family carbohydrate kinase JNN61_09880 PF01467 Cytidylyltransferase-like JNN61_09885 PF03710 Glutamate-ammonia ligase adenylyltransferase JNN61_09885 PF08335 GlnD PII-uridylyltransferase JNN61_09890 PF01928 CYTH domain JNN61_09895 PF08239 Bacterial SH3 domain JNN61_09900 PF01966 HD domain JNN61_09900 PF01743 Poly A polymerase head domain JNN61_09900 PF12627 Probable RNA and SrmB- binding site of polymerase A JNN61_09905 PF02673 Bacitracin resistance protein BacA JNN61_09910 PF02152 Dihydroneopterin aldolase JNN61_09915 PF02660 Glycerol-3-phosphate acyltransferase JNN61_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_09920 PF03466 LysR substrate binding domain JNN61_09925 PF05681 Fumarate hydratase (Fumerase) JNN61_09930 PF05683 Fumarase C-terminus JNN61_09935 PF00939 Sodium:sulfate symporter transmembrane region JNN61_09940 PF00814 Glycoprotease family JNN61_09945 PF01165 Ribosomal protein S21 JNN61_09950 PF10410 DnaB-helicase binding domain of primase JNN61_09950 PF08278 DNA primase DnaG DnaB-binding JNN61_09950 PF08275 DNA primase catalytic core, N-terminal domain JNN61_09950 PF01807 CHC2 zinc finger JNN61_09955 PF04542 Sigma-70 region 2 JNN61_09955 PF00140 Sigma-70 factor, region 1.2 JNN61_09955 PF03979 Sigma-70 factor, region 1.1 JNN61_09955 PF04546 Sigma-70, non-essential region JNN61_09955 PF04545 Sigma-70, region 4 JNN61_09955 PF04539 Sigma-70 region 3 JNN61_09960 PF03167 Uracil DNA glycosylase superfamily JNN61_09970 PF04954 Siderophore-interacting protein JNN61_09970 PF08021 Siderophore-interacting FAD-binding domain JNN61_09975 PF03551 Transcriptional regulator PadR-like family JNN61_09980 PF08447 PAS fold JNN61_09980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNN61_09985 PF00202 Aminotransferase class-III JNN61_09990 PF01588 Putative tRNA binding domain JNN61_09995 PF00356 Bacterial regulatory proteins, lacI family JNN61_10000 PF02929 Beta galactosidase small chain JNN61_10000 PF02837 Glycosyl hydrolases family 2, sugar binding domain JNN61_10000 PF16353 Domain of unknown function(DUF4981) JNN61_10000 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JNN61_10000 PF00703 Glycosyl hydrolases family 2 JNN61_10005 PF04074 YhcH/YjgK/YiaL JNN61_10010 PF13520 Amino acid permease JNN61_10020 PF01204 Trehalase JNN61_10030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNN61_10030 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_10035 PF05175 Methyltransferase small domain JNN61_10040 PF01863 Protein of unknown function DUF45 JNN61_10045 PF02698 DUF218 domain JNN61_10050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNN61_10055 PF03741 Integral membrane protein TerC family JNN61_10060 PF00375 Sodium:dicarboxylate symporter family JNN61_10065 PF10688 Bacterial inner membrane protein JNN61_10070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JNN61_10070 PF08666 SAF domain JNN61_10075 PF02614 Glucuronate isomerase JNN61_10080 PF07690 Major Facilitator Superfamily JNN61_10085 PF07729 FCD domain JNN61_10085 PF00392 Bacterial regulatory proteins, gntR family JNN61_10090 PF09335 SNARE associated Golgi protein JNN61_10095 PF13721 SecD export protein N-terminal TM region JNN61_10100 PF06476 Protein of unknown function (DUF1090) JNN61_10105 PF05957 Bacterial protein of unknown function (DUF883) JNN61_10110 PF07332 Putative Actinobacterial Holin-X, holin superfamily III JNN61_10115 PF13997 YqjK-like protein JNN61_10120 PF07681 DoxX JNN61_10125 PF13409 Glutathione S-transferase, N-terminal domain JNN61_10130 PF05656 Protein of unknown function (DUF805) JNN61_10135 PF05656 Protein of unknown function (DUF805) JNN61_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_10140 PF03466 LysR substrate binding domain JNN61_10145 PF17954 Quercetinase C-terminal cupin domain JNN61_10145 PF02678 Pirin JNN61_10155 PF03313 Serine dehydratase alpha chain JNN61_10165 PF03313 Serine dehydratase alpha chain JNN61_10165 PF03315 Serine dehydratase beta chain JNN61_10170 PF01042 Endoribonuclease L-PSP JNN61_10175 PF01228 Glycine radical JNN61_10175 PF02901 Pyruvate formate lyase-like JNN61_10180 PF00871 Acetokinase family JNN61_10185 PF03222 Tryptophan/tyrosine permease family JNN61_10190 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_10195 PF03466 LysR substrate binding domain JNN61_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_10220 PF02595 Glycerate kinase family JNN61_10225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNN61_10225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNN61_10230 PF03328 HpcH/HpaI aldolase/citrate lyase family JNN61_10235 PF07690 Major Facilitator Superfamily JNN61_10240 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JNN61_10240 PF08666 SAF domain JNN61_10245 PF15937 prlF antitoxin for toxin YhaV_toxin JNN61_10250 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system JNN61_10255 PF08220 DeoR-like helix-turn-helix domain JNN61_10255 PF00455 DeoR C terminal sensor domain JNN61_10260 PF08013 Tagatose 6 phosphate kinase JNN61_10265 PF03830 PTS system sorbose subfamily IIB component JNN61_10270 PF03609 PTS system sorbose-specific iic component JNN61_10275 PF03613 PTS system mannose/fructose/sorbose family IID component JNN61_10280 PF03610 PTS system fructose IIA component JNN61_10285 PF01979 Amidohydrolase family JNN61_10290 PF01380 SIS domain JNN61_10295 PF01116 Fructose-bisphosphate aldolase class-II JNN61_10300 PF03830 PTS system sorbose subfamily IIB component JNN61_10305 PF03609 PTS system sorbose-specific iic component JNN61_10310 PF03613 PTS system mannose/fructose/sorbose family IID component JNN61_10315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JNN61_10320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNN61_10325 PF04348 LppC putative lipoprotein JNN61_10330 PF02021 Uncharacterised protein family UPF0102 JNN61_10335 PF13580 SIS domain JNN61_10340 PF04972 BON domain JNN61_10345 PF03773 Predicted permease JNN61_10350 PF13460 NAD(P)H-binding JNN61_10355 PF01965 DJ-1/PfpI family JNN61_10365 PF01541 GIY-YIG catalytic domain JNN61_10370 PF13508 Acetyltransferase (GNAT) domain JNN61_10375 PF02036 SCP-2 sterol transfer family JNN61_10380 PF01136 Peptidase family U32 JNN61_10385 PF01136 Peptidase family U32 JNN61_10390 PF00296 Luciferase-like monooxygenase JNN61_10395 PF03222 Tryptophan/tyrosine permease family JNN61_10400 PF12343 Cold shock protein DEAD box A JNN61_10400 PF03880 DbpA RNA binding domain JNN61_10400 PF00270 DEAD/DEAH box helicase JNN61_10400 PF00271 Helicase conserved C-terminal domain JNN61_10410 PF13181 Tetratricopeptide repeat JNN61_10410 PF07719 Tetratricopeptide repeat JNN61_10415 PF00575 S1 RNA binding domain JNN61_10415 PF03725 3' exoribonuclease family, domain 2 JNN61_10415 PF00013 KH domain JNN61_10415 PF01138 3' exoribonuclease family, domain 1 JNN61_10415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JNN61_10420 PF00312 Ribosomal protein S15 JNN61_10425 PF16198 tRNA pseudouridylate synthase B C-terminal domain JNN61_10425 PF09157 Pseudouridine synthase II TruB, C-terminal JNN61_10425 PF01509 TruB family pseudouridylate synthase (N terminal domain) JNN61_10430 PF02033 Ribosome-binding factor A JNN61_10435 PF00009 Elongation factor Tu GTP binding domain JNN61_10435 PF11987 Translation-initiation factor 2 JNN61_10435 PF08364 Bacterial translation initiation factor IF-2 associated region JNN61_10435 PF04760 Translation initiation factor IF-2, N-terminal region JNN61_10440 PF00575 S1 RNA binding domain JNN61_10440 PF13184 NusA-like KH domain JNN61_10440 PF08529 NusA N-terminal domain JNN61_10445 PF17384 RimP C-terminal SH3 domain JNN61_10445 PF02576 RimP N-terminal domain JNN61_10455 PF00764 Arginosuccinate synthase JNN61_10460 PF00884 Sulfatase JNN61_10470 PF03840 Preprotein translocase SecG subunit JNN61_10475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JNN61_10475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JNN61_10475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JNN61_10475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JNN61_10480 PF00809 Pterin binding enzyme JNN61_10485 PF01434 Peptidase family M41 JNN61_10485 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_10485 PF06480 FtsH Extracellular JNN61_10485 PF17862 AAA+ lid domain JNN61_10490 PF01728 FtsJ-like methyltransferase JNN61_10495 PF01985 CRS1 / YhbY (CRM) domain JNN61_10500 PF01272 Transcription elongation factor, GreA/GreB, C-term JNN61_10500 PF03449 Transcription elongation factor, N-terminal JNN61_10505 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JNN61_10510 PF01018 GTP1/OBG JNN61_10510 PF01926 50S ribosome-binding GTPase JNN61_10515 PF00892 EamA-like transporter family JNN61_10520 PF01016 Ribosomal L27 protein JNN61_10525 PF00829 Ribosomal prokaryotic L21 protein JNN61_10530 PF00348 Polyprenyl synthetase JNN61_10535 PF13693 Winged helix-turn-helix DNA-binding JNN61_10540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNN61_10545 PF01722 BolA-like protein JNN61_10550 PF13466 STAS domain JNN61_10555 PF05494 MlaC protein JNN61_10560 PF02470 MlaD protein JNN61_10565 PF02405 Permease MlaE JNN61_10570 PF00005 ABC transporter JNN61_10575 PF01699 Sodium/calcium exchanger protein JNN61_10580 PF00571 CBS domain JNN61_10580 PF01380 SIS domain JNN61_10590 PF06835 Lipopolysaccharide-assembly, LptC-related JNN61_10595 PF03968 OstA-like protein JNN61_10600 PF12399 Branched-chain amino acid ATP-binding cassette transporter JNN61_10600 PF00005 ABC transporter JNN61_10605 PF04552 Sigma-54, DNA binding domain JNN61_10605 PF04963 Sigma-54 factor, core binding domain JNN61_10605 PF00309 Sigma-54 factor, Activator interacting domain (AID) JNN61_10610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JNN61_10615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_10620 PF03668 P-loop ATPase protein family JNN61_10625 PF00381 PTS HPr component phosphorylation site JNN61_10630 PF10707 PhoP regulatory network protein YrbL JNN61_10635 PF00912 Transglycosylase JNN61_10645 PF00072 Response regulator receiver domain JNN61_10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_10645 PF00512 His Kinase A (phospho-acceptor) domain JNN61_10645 PF18415 Histidine kinase receptor ArcB trans-membrane domain JNN61_10645 PF01627 Hpt domain JNN61_10645 PF00989 PAS fold JNN61_10650 PF04055 Radical SAM superfamily JNN61_10650 PF16199 Radical_SAM C-terminal domain JNN61_10655 PF00310 Glutamine amidotransferases class-II JNN61_10655 PF01645 Conserved region in glutamate synthase JNN61_10655 PF04898 Glutamate synthase central domain JNN61_10655 PF01493 GXGXG motif JNN61_10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_10660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JNN61_10665 PF06250 YhcG PDDEXK nuclease domain JNN61_10665 PF17761 DUF1016 N-terminal domain JNN61_10670 PF04074 YhcH/YjgK/YiaL JNN61_10675 PF00480 ROK family JNN61_10680 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JNN61_10685 PF07690 Major Facilitator Superfamily JNN61_10690 PF00701 Dihydrodipicolinate synthetase family JNN61_10695 PF07729 FCD domain JNN61_10695 PF00392 Bacterial regulatory proteins, gntR family JNN61_10700 PF03606 C4-dicarboxylate anaerobic carrier JNN61_10705 PF04386 Stringent starvation protein B JNN61_10710 PF02798 Glutathione S-transferase, N-terminal domain JNN61_10710 PF00043 Glutathione S-transferase, C-terminal domain JNN61_10715 PF00380 Ribosomal protein S9/S16 JNN61_10720 PF00572 Ribosomal protein L13 JNN61_10725 PF03969 AFG1-like ATPase JNN61_10730 PF06295 Protein of unknown function (DUF1043) JNN61_10735 PF00595 PDZ domain JNN61_10735 PF13180 PDZ domain JNN61_10740 PF13180 PDZ domain JNN61_10745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JNN61_10745 PF00056 lactate/malate dehydrogenase, NAD binding domain JNN61_10750 PF01316 Arginine repressor, DNA binding domain JNN61_10750 PF02863 Arginine repressor, C-terminal domain JNN61_10755 PF07338 Protein of unknown function (DUF1471) JNN61_10760 PF01337 Barstar (barnase inhibitor) JNN61_10765 PF04632 Fusaric acid resistance protein family JNN61_10770 PF13533 Biotin-lipoyl like JNN61_10775 PF07869 Protein of unknown function (DUF1656) JNN61_10780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_10780 PF03466 LysR substrate binding domain JNN61_10785 PF01523 Putative modulator of DNA gyrase JNN61_10790 PF13502 AsmA-like C-terminal region JNN61_10790 PF13116 Protein of unknown function JNN61_10795 PF10150 Ribonuclease E/G family JNN61_10795 PF00575 S1 RNA binding domain JNN61_10800 PF02545 Maf-like protein JNN61_10805 PF04093 rod shape-determining protein MreD JNN61_10810 PF04085 rod shape-determining protein MreC JNN61_10820 PF17157 Gammaproteobacterial periplasmic sensor domain JNN61_10820 PF00563 EAL domain JNN61_10820 PF00990 Diguanylate cyclase, GGDEF domain JNN61_10825 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_10825 PF00107 Zinc-binding dehydrogenase JNN61_10830 PF00364 Biotin-requiring enzyme JNN61_10835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNN61_10835 PF00289 Biotin carboxylase, N-terminal domain JNN61_10835 PF02785 Biotin carboxylase C-terminal domain JNN61_10840 PF06196 Protein of unknown function (DUF997) JNN61_10845 PF00474 Sodium:solute symporter family JNN61_10855 PF01207 Dihydrouridine synthase (Dus) JNN61_10860 PF02954 Bacterial regulatory protein, Fis family JNN61_10865 PF01555 DNA methylase JNN61_10870 PF10831 Protein of unknown function (DUF2556) JNN61_10875 PF08361 MAATS-type transcriptional repressor, C-terminal region JNN61_10875 PF00440 Bacterial regulatory proteins, tetR family JNN61_10880 PF00529 HlyD membrane-fusion protein of T1SS JNN61_10880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_10885 PF00873 AcrB/AcrD/AcrF family JNN61_10905 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_10910 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_10915 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_10920 PF00005 ABC transporter JNN61_10965 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_10970 PF07369 Protein of unknown function (DUF1488) JNN61_10975 PF01488 Shikimate / quinate 5-dehydrogenase JNN61_10975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JNN61_10975 PF08501 Shikimate dehydrogenase substrate binding domain JNN61_10980 PF01300 Telomere recombination JNN61_10985 PF01396 Topoisomerase DNA binding C4 zinc finger JNN61_10990 PF04361 Protein of unknown function (DUF494) JNN61_10995 PF17782 DprA winged helix domain JNN61_10995 PF02481 DNA recombination-mediator protein A JNN61_11000 PF01327 Polypeptide deformylase JNN61_11005 PF02911 Formyl transferase, C-terminal domain JNN61_11005 PF00551 Formyl transferase JNN61_11010 PF01029 NusB family JNN61_11010 PF01189 16S rRNA methyltransferase RsmB/F JNN61_11015 PF02080 TrkA-C domain JNN61_11015 PF02254 TrkA-N domain JNN61_11020 PF01741 Large-conductance mechanosensitive channel, MscL JNN61_11025 PF03889 Alternative ribosome-rescue factor A JNN61_11030 PF13411 MerR HTH family regulatory protein JNN61_11035 PF09350 Domain of unknown function (DUF1992) JNN61_11040 PF01196 Ribosomal protein L17 JNN61_11045 PF01000 RNA polymerase Rpb3/RpoA insert domain JNN61_11045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JNN61_11045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JNN61_11050 PF01479 S4 domain JNN61_11050 PF00163 Ribosomal protein S4/S9 N-terminal domain JNN61_11055 PF00411 Ribosomal protein S11 JNN61_11060 PF00416 Ribosomal protein S13/S18 JNN61_11065 PF00444 Ribosomal protein L36 JNN61_11070 PF00344 SecY translocase JNN61_11075 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JNN61_11080 PF00327 Ribosomal protein L30p/L7e JNN61_11085 PF00333 Ribosomal protein S5, N-terminal domain JNN61_11085 PF03719 Ribosomal protein S5, C-terminal domain JNN61_11090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JNN61_11095 PF00347 Ribosomal protein L6 JNN61_11100 PF00410 Ribosomal protein S8 JNN61_11105 PF00253 Ribosomal protein S14p/S29e JNN61_11110 PF00673 ribosomal L5P family C-terminus JNN61_11110 PF00281 Ribosomal protein L5 JNN61_11115 PF00467 KOW motif JNN61_11115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JNN61_11120 PF00238 Ribosomal protein L14p/L23e JNN61_11125 PF00366 Ribosomal protein S17 JNN61_11130 PF00831 Ribosomal L29 protein JNN61_11135 PF00252 Ribosomal protein L16p/L10e JNN61_11140 PF00189 Ribosomal protein S3, C-terminal domain JNN61_11140 PF07650 KH domain JNN61_11145 PF00237 Ribosomal protein L22p/L17e JNN61_11150 PF00203 Ribosomal protein S19 JNN61_11155 PF03947 Ribosomal Proteins L2, C-terminal domain JNN61_11155 PF00181 Ribosomal Proteins L2, RNA binding domain JNN61_11160 PF00276 Ribosomal protein L23 JNN61_11165 PF00573 Ribosomal protein L4/L1 family JNN61_11170 PF00297 Ribosomal protein L3 JNN61_11175 PF00338 Ribosomal protein S10p/S20e JNN61_11180 PF01478 Type IV leader peptidase family JNN61_11185 PF00210 Ferritin-like domain JNN61_11190 PF04324 BFD-like [2Fe-2S] binding domain JNN61_11195 PF03143 Elongation factor Tu C-terminal domain JNN61_11195 PF03144 Elongation factor Tu domain 2 JNN61_11195 PF00009 Elongation factor Tu GTP binding domain JNN61_11200 PF00679 Elongation factor G C-terminus JNN61_11200 PF03764 Elongation factor G, domain IV JNN61_11200 PF14492 Elongation Factor G, domain II JNN61_11200 PF00009 Elongation factor Tu GTP binding domain JNN61_11200 PF03144 Elongation factor Tu domain 2 JNN61_11205 PF00177 Ribosomal protein S7p/S5e JNN61_11210 PF00164 Ribosomal protein S12/S23 JNN61_11215 PF04077 DsrH like protein JNN61_11220 PF02635 DsrE/DsrF-like family JNN61_11225 PF02635 DsrE/DsrF-like family JNN61_11230 PF08348 YheO-like PAS domain JNN61_11230 PF13309 HTH domain JNN61_11235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JNN61_11235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JNN61_11240 PF04102 SlyX JNN61_11245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JNN61_11250 PF09526 Probable metal-binding protein (DUF2387) JNN61_11255 PF02254 TrkA-N domain JNN61_11255 PF00999 Sodium/hydrogen exchanger family JNN61_11260 PF02525 Flavodoxin-like fold JNN61_11265 PF12848 ABC transporter JNN61_11265 PF00005 ABC transporter JNN61_11270 PF00561 alpha/beta hydrolase fold JNN61_11275 PF06794 Uncharacterised protein family (UPF0270) JNN61_11280 PF00485 Phosphoribulokinase / Uridine kinase family JNN61_11285 PF02566 OsmC-like protein JNN61_11290 PF13545 Crp-like helix-turn-helix domain JNN61_11290 PF00027 Cyclic nucleotide-binding domain JNN61_11295 PF12805 FUSC-like inner membrane protein yccS JNN61_11300 PF00202 Aminotransferase class-III JNN61_11305 PF00117 Glutamine amidotransferase class-I JNN61_11310 PF02661 Fic/DOC family JNN61_11315 PF10832 Protein of unknown function (DUF2559) JNN61_11320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JNN61_11325 PF07690 Major Facilitator Superfamily JNN61_11330 PF18267 Rubredoxin NAD+ reductase C-terminal domain JNN61_11330 PF04324 BFD-like [2Fe-2S] binding domain JNN61_11330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JNN61_11330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JNN61_11330 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_11335 PF13806 Rieske-like [2Fe-2S] domain JNN61_11340 PF01226 Formate/nitrite transporter JNN61_11345 PF14824 Sirohaem biosynthesis protein central JNN61_11345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNN61_11345 PF10414 Sirohaem synthase dimerisation region JNN61_11350 PF13978 Protein of unknown function (DUF4223) JNN61_11355 PF00155 Aminotransferase class I and II JNN61_11360 PF10797 Protein of unknown function JNN61_11365 PF10941 Protein of unknown function DUF2620 JNN61_11370 PF02126 Phosphotriesterase family JNN61_11375 PF01676 Metalloenzyme superfamily JNN61_11380 PF01168 Alanine racemase, N-terminal domain JNN61_11390 PF14502 Helix-turn-helix domain JNN61_11390 PF14503 YhfZ C-terminal domain JNN61_11395 PF00579 tRNA synthetases class I (W and Y) JNN61_11400 PF13419 Haloacid dehalogenase-like hydrolase JNN61_11405 PF00834 Ribulose-phosphate 3 epimerase family JNN61_11410 PF02086 D12 class N6 adenine-specific DNA methyltransferase JNN61_11415 PF05036 Sporulation related domain JNN61_11420 PF01761 3-dehydroquinate synthase JNN61_11425 PF01202 Shikimate kinase JNN61_11430 PF00263 Bacterial type II and III secretion system protein JNN61_11430 PF03958 Bacterial type II/III secretion system short domain JNN61_11435 PF10748 DNA utilization proteins HofP JNN61_11445 PF05137 Fimbrial assembly protein (PilN) JNN61_11455 PF17092 Penicillin-binding protein OB-like domain JNN61_11455 PF00905 Penicillin binding protein transpeptidase domain JNN61_11455 PF00912 Transglycosylase JNN61_11460 PF00293 NUDIX domain JNN61_11465 PF07095 Intracellular growth attenuator protein IgaA JNN61_11470 PF13419 Haloacid dehalogenase-like hydrolase JNN61_11475 PF01479 S4 domain JNN61_11480 PF01430 Hsp33 protein JNN61_11485 PF13687 Domain of unknown function (DUF4153) JNN61_11495 PF01293 Phosphoenolpyruvate carboxykinase JNN61_11510 PF00512 His Kinase A (phospho-acceptor) domain JNN61_11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_11510 PF00672 HAMP domain JNN61_11515 PF00486 Transcriptional regulatory protein, C terminal JNN61_11515 PF00072 Response regulator receiver domain JNN61_11520 PF01272 Transcription elongation factor, GreA/GreB, C-term JNN61_11520 PF03449 Transcription elongation factor, N-terminal JNN61_11525 PF16921 Tex protein YqgF-like domain JNN61_11525 PF09371 Tex-like protein N-terminal domain JNN61_11525 PF00575 S1 RNA binding domain JNN61_11525 PF17674 HHH domain JNN61_11530 PF04023 FeoA domain JNN61_11535 PF07670 Nucleoside recognition JNN61_11535 PF02421 Ferrous iron transport protein B JNN61_11535 PF17910 FeoB cytosolic helical domain JNN61_11535 PF07664 Ferrous iron transport protein B C terminus JNN61_11540 PF09012 FeoC like transcriptional regulator JNN61_11545 PF04754 Putative transposase, YhgA-like JNN61_11550 PF00561 alpha/beta hydrolase fold JNN61_11555 PF00156 Phosphoribosyl transferase domain JNN61_11560 PF01521 Iron-sulphur cluster biosynthesis JNN61_11560 PF01106 NifU-like domain JNN61_11565 PF02447 GntP family permease JNN61_11570 PF02446 4-alpha-glucanotransferase JNN61_11575 PF00343 Carbohydrate phosphorylase JNN61_11580 PF17874 MalT-like TPR region JNN61_11580 PF00196 Bacterial regulatory proteins, luxR family JNN61_11585 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain JNN61_11585 PF01137 RNA 3'-terminal phosphate cyclase JNN61_11590 PF01139 tRNA-splicing ligase RtcB JNN61_11595 PF06956 Regulator of RNA terminal phosphate cyclase JNN61_11595 PF00158 Sigma-54 interaction domain JNN61_11600 PF00455 DeoR C terminal sensor domain JNN61_11600 PF08220 DeoR-like helix-turn-helix domain JNN61_11605 PF01694 Rhomboid family JNN61_11605 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JNN61_11610 PF00581 Rhodanese-like domain JNN61_11615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JNN61_11615 PF01266 FAD dependent oxidoreductase JNN61_11635 PF00343 Carbohydrate phosphorylase JNN61_11640 PF00534 Glycosyl transferases group 1 JNN61_11640 PF08323 Starch synthase catalytic domain JNN61_11645 PF00483 Nucleotidyl transferase JNN61_11650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JNN61_11650 PF00128 Alpha amylase, catalytic domain JNN61_11650 PF18390 Glycogen debranching enzyme C-terminal domain JNN61_11655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JNN61_11655 PF02806 Alpha amylase, C-terminal all-beta domain JNN61_11655 PF00128 Alpha amylase, catalytic domain JNN61_11660 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNN61_11660 PF02774 Semialdehyde dehydrogenase, dimerisation domain JNN61_11665 PF01914 MarC family integral membrane protein JNN61_11675 PF00570 HRDC domain JNN61_11675 PF00270 DEAD/DEAH box helicase JNN61_11675 PF00271 Helicase conserved C-terminal domain JNN61_11675 PF16124 RecQ zinc-binding JNN61_11675 PF09382 RQC domain JNN61_11680 PF02447 GntP family permease JNN61_11685 PF01202 Shikimate kinase JNN61_11690 PF00356 Bacterial regulatory proteins, lacI family JNN61_11690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNN61_11695 PF17954 Quercetinase C-terminal cupin domain JNN61_11695 PF02678 Pirin JNN61_11700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNN61_11700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNN61_11705 PF00583 Acetyltransferase (GNAT) family JNN61_11710 PF05638 Type VI secretion system effector, Hcp JNN61_11725 PF15567 Immunity protein 35 JNN61_11735 PF10956 Protein of unknown function (DUF2756) JNN61_11740 PF03009 Glycerophosphoryl diester phosphodiesterase family JNN61_11745 PF17912 MalK OB fold domain JNN61_11745 PF00005 ABC transporter JNN61_11750 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_11755 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_11760 PF13416 Bacterial extracellular solute-binding protein JNN61_11770 PF00005 ABC transporter JNN61_11775 PF12399 Branched-chain amino acid ATP-binding cassette transporter JNN61_11775 PF00005 ABC transporter JNN61_11780 PF02653 Branched-chain amino acid transport system / permease component JNN61_11780 PF11862 Domain of unknown function (DUF3382) JNN61_11785 PF02653 Branched-chain amino acid transport system / permease component JNN61_11790 PF13458 Periplasmic binding protein JNN61_11795 PF12568 Acetyltransferase (GNAT) domain, PanZ JNN61_11800 PF13458 Periplasmic binding protein JNN61_11805 PF04542 Sigma-70 region 2 JNN61_11805 PF04545 Sigma-70, region 4 JNN61_11810 PF02687 FtsX-like permease family JNN61_11810 PF18075 FtsX extracellular domain JNN61_11815 PF00005 ABC transporter JNN61_11820 PF02881 SRP54-type protein, helical bundle domain JNN61_11820 PF00448 SRP54-type protein, GTPase domain JNN61_11830 PF06611 Protein of unknown function (DUF1145) JNN61_11835 PF10694 Protein of unknown function (DUF2500) JNN61_11840 PF07947 YhhN family JNN61_11845 PF00403 Heavy-metal-associated domain JNN61_11850 PF01206 Sulfurtransferase TusA JNN61_11855 PF02592 Putative vitamin uptake transporter JNN61_11860 PF08786 DcrB JNN61_11865 PF07690 Major Facilitator Superfamily JNN61_11870 PF01594 AI-2E family transporter JNN61_11875 PF01648 4'-phosphopantetheinyl transferase superfamily JNN61_11880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_11885 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_11890 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_11895 PF00005 ABC transporter JNN61_11900 PF00005 ABC transporter JNN61_11905 PF08753 NikR C terminal nickel binding domain JNN61_11905 PF01402 Ribbon-helix-helix protein, copG family JNN61_11910 PF03527 RHS protein JNN61_11910 PF15606 Bacterial toxin 34 JNN61_11910 PF05593 RHS Repeat JNN61_11930 PF05593 RHS Repeat JNN61_11930 PF03527 RHS protein JNN61_11930 PF14220 Domain of unknown function (DUF4329) JNN61_11940 PF03130 PBS lyase HEAT-like repeat JNN61_11970 PF00005 ABC transporter JNN61_11975 PF13533 Biotin-lipoyl like JNN61_11980 PF13258 Domain of unknown function (DUF4049) JNN61_11985 PF13258 Domain of unknown function (DUF4049) JNN61_11990 PF10951 Protein of unknown function (DUF2776) JNN61_12000 PF01384 Phosphate transporter family JNN61_12005 PF10625 Universal stress protein B (UspB) JNN61_12010 PF00582 Universal stress protein family JNN61_12015 PF00854 POT family JNN61_12020 PF04445 Putative SAM-dependent methyltransferase JNN61_12025 PF01432 Peptidase family M3 JNN61_12030 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JNN61_12035 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_12035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNN61_12045 PF01022 Bacterial regulatory protein, arsR family JNN61_12050 PF02040 Arsenical pump membrane protein JNN61_12055 PF03960 ArsC family JNN61_12075 PF03843 Outer membrane lipoprotein Slp family JNN61_12080 PF00196 Bacterial regulatory proteins, luxR family JNN61_12085 PF05171 Haemin-degrading HemS.ChuX domain JNN61_12090 PF00593 TonB dependent receptor JNN61_12090 PF07715 TonB-dependent Receptor Plug Domain JNN61_12095 PF01497 Periplasmic binding protein JNN61_12100 PF04055 Radical SAM superfamily JNN61_12105 PF06228 Haem utilisation ChuX/HutX JNN61_12115 PF01032 FecCD transport family JNN61_12120 PF00005 ABC transporter JNN61_12150 PF06411 HdeA/HdeB family JNN61_12155 PF06411 HdeA/HdeB family JNN61_12160 PF03729 Short repeat of unknown function (DUF308) JNN61_12165 PF00196 Bacterial regulatory proteins, luxR family JNN61_12175 PF00529 HlyD membrane-fusion protein of T1SS JNN61_12175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_12180 PF00873 AcrB/AcrD/AcrF family JNN61_12185 PF12833 Helix-turn-helix domain JNN61_12190 PF12833 Helix-turn-helix domain JNN61_12195 PF00282 Pyridoxal-dependent decarboxylase conserved domain JNN61_12200 PF14376 Haem-binding domain JNN61_12200 PF03150 Di-haem cytochrome c peroxidase JNN61_12200 PF00034 Cytochrome c JNN61_12205 PF01204 Trehalase JNN61_12210 PF00196 Bacterial regulatory proteins, luxR family JNN61_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_12215 PF03466 LysR substrate binding domain JNN61_12220 PF03631 Virulence factor BrkB JNN61_12225 PF07690 Major Facilitator Superfamily JNN61_12225 PF00083 Sugar (and other) transporter JNN61_12230 PF05170 AsmA family JNN61_12235 PF00563 EAL domain JNN61_12240 PF00294 pfkB family carbohydrate kinase JNN61_12245 PF05193 Peptidase M16 inactive domain JNN61_12245 PF00675 Insulinase (Peptidase family M16) JNN61_12250 PF00375 Sodium:dicarboxylate symporter family JNN61_12255 PF00563 EAL domain JNN61_12255 PF00990 Diguanylate cyclase, GGDEF domain JNN61_12255 PF00672 HAMP domain JNN61_12255 PF17154 Gammaproteobacterial periplasmic sensor domain JNN61_12260 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JNN61_12265 PF01270 Glycosyl hydrolases family 8 JNN61_12270 PF03170 Bacterial cellulose synthase subunit JNN61_12275 PF07238 PilZ domain JNN61_12275 PF03552 Cellulose synthase JNN61_12275 PF00535 Glycosyl transferase family 2 JNN61_12280 PF06564 Cellulose biosynthesis protein BcsQ JNN61_12285 PF10945 Cellulose biosynthesis protein BcsR JNN61_12290 PF10995 Cellulose biosynthesis GIL JNN61_12295 PF11120 Cellulose biosynthesis protein BcsF JNN61_12300 PF11658 Cellulose biosynthesis protein BcsG JNN61_12305 PF13940 Toxin Ldr, type I toxin-antitoxin system JNN61_12310 PF13940 Toxin Ldr, type I toxin-antitoxin system JNN61_12315 PF13940 Toxin Ldr, type I toxin-antitoxin system JNN61_12320 PF03222 Tryptophan/tyrosine permease family JNN61_12325 PF00005 ABC transporter JNN61_12325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_12330 PF00005 ABC transporter JNN61_12330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_12335 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_12335 PF12911 N-terminal TM domain of oligopeptide transport permease C JNN61_12340 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_12345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_12360 PF08019 Phosphoethanolamine transferase EptA/EptB JNN61_12360 PF00884 Sulfatase JNN61_12365 PF07690 Major Facilitator Superfamily JNN61_12370 PF03797 Autotransporter beta-domain JNN61_12375 PF03352 Methyladenine glycosylase JNN61_12380 PF00583 Acetyltransferase (GNAT) family JNN61_12385 PF00384 Molybdopterin oxidoreductase JNN61_12385 PF18364 Molybdopterin oxidoreductase N-terminal domain JNN61_12385 PF01568 Molydopterin dinucleotide binding domain JNN61_12390 PF00691 OmpA family JNN61_12390 PF13488 Glycine zipper JNN61_12395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNN61_12395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNN61_12400 PF11254 Protein of unknown function (DUF3053) JNN61_12405 PF01381 Helix-turn-helix JNN61_12410 PF00313 'Cold-shock' DNA-binding domain JNN61_12415 PF01848 Hok/gef family JNN61_12425 PF02092 Glycyl-tRNA synthetase beta subunit JNN61_12425 PF05746 DALR anticodon binding domain JNN61_12430 PF02091 Glycyl-tRNA synthetase alpha subunit JNN61_12435 PF13983 YsaB-like lipoprotein JNN61_12440 PF01757 Acyltransferase family JNN61_12445 PF05360 yiaA/B two helix domain JNN61_12450 PF05360 yiaA/B two helix domain JNN61_12455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_12455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_12465 PF13407 Periplasmic binding protein domain JNN61_12470 PF00005 ABC transporter JNN61_12475 PF02653 Branched-chain amino acid transport system / permease component JNN61_12480 PF12833 Helix-turn-helix domain JNN61_12485 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNN61_12490 PF00128 Alpha amylase, catalytic domain JNN61_12495 PF00155 Aminotransferase class I and II JNN61_12500 PF13247 4Fe-4S dicluster domain JNN61_12505 PF09339 IclR helix-turn-helix domain JNN61_12505 PF01614 Bacterial transcriptional regulator JNN61_12510 PF02615 Malate/L-lactate dehydrogenase JNN61_12515 PF04074 YhcH/YjgK/YiaL JNN61_12520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JNN61_12525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JNN61_12530 PF03480 Bacterial extracellular solute-binding protein, family 7 JNN61_12535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_12535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_12540 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JNN61_12545 PF01261 Xylose isomerase-like TIM barrel JNN61_12550 PF00596 Class II Aldolase and Adducin N-terminal domain JNN61_12565 PF07944 Beta-L-arabinofuranosidase, GH127 JNN61_12570 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JNN61_12570 PF01381 Helix-turn-helix JNN61_12580 PF00171 Aldehyde dehydrogenase family JNN61_12585 PF00465 Iron-containing alcohol dehydrogenase JNN61_12590 PF03144 Elongation factor Tu domain 2 JNN61_12590 PF00009 Elongation factor Tu GTP binding domain JNN61_12590 PF09106 Elongation factor SelB, winged helix JNN61_12590 PF09107 Elongation factor SelB, winged helix JNN61_12595 PF12390 Selenocysteine synthase N terminal JNN61_12595 PF03841 L-seryl-tRNA selenium transferase JNN61_12600 PF00043 Glutathione S-transferase, C-terminal domain JNN61_12600 PF13417 Glutathione S-transferase, N-terminal domain JNN61_12605 PF05593 RHS Repeat JNN61_12605 PF03527 RHS protein JNN61_12615 PF15596 Immunity protein 57 JNN61_12620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_12620 PF00529 HlyD membrane-fusion protein of T1SS JNN61_12625 PF11742 Protein of unknown function (DUF3302) JNN61_12630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_12630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_12630 PF02378 Phosphotransferase system, EIIC JNN61_12635 PF01232 Mannitol dehydrogenase Rossmann domain JNN61_12635 PF08125 Mannitol dehydrogenase C-terminal domain JNN61_12640 PF05068 Mannitol repressor JNN61_12650 PF10928 Protein of unknown function (DUF2810) JNN61_12655 PF11622 Protein of unknown function (DUF3251) JNN61_12660 PF05662 Coiled stalk of trimeric autotransporter adhesin JNN61_12660 PF05658 Head domain of trimeric autotransporter adhesin JNN61_12660 PF13018 Extended Signal Peptide of Type V secretion system JNN61_12660 PF03895 YadA-like membrane anchor domain JNN61_12665 PF02652 L-lactate permease JNN61_12670 PF07729 FCD domain JNN61_12670 PF00392 Bacterial regulatory proteins, gntR family JNN61_12675 PF01070 FMN-dependent dehydrogenase JNN61_12680 PF00588 SpoU rRNA Methylase family JNN61_12685 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_12685 PF06426 Serine acetyltransferase, N-terminal JNN61_12690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JNN61_12690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JNN61_12695 PF02556 Preprotein translocase subunit SecB JNN61_12700 PF00462 Glutaredoxin JNN61_12705 PF00581 Rhodanese-like domain JNN61_12710 PF01676 Metalloenzyme superfamily JNN61_12710 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JNN61_12715 PF01551 Peptidase family M23 JNN61_12720 PF04748 Divergent polysaccharide deacetylase JNN61_12725 PF00535 Glycosyl transferase family 2 JNN61_12730 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_12730 PF00107 Zinc-binding dehydrogenase JNN61_12735 PF00155 Aminotransferase class I and II JNN61_12740 PF01370 NAD dependent epimerase/dehydratase family JNN61_12745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JNN61_12750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JNN61_12765 PF01501 Glycosyl transferase family 8 JNN61_12765 PF08437 Glycosyl transferase family 8 C-terminal JNN61_12770 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) JNN61_12775 PF08437 Glycosyl transferase family 8 C-terminal JNN61_12775 PF01501 Glycosyl transferase family 8 JNN61_12780 PF01501 Glycosyl transferase family 8 JNN61_12780 PF08437 Glycosyl transferase family 8 C-terminal JNN61_12790 PF00534 Glycosyl transferases group 1 JNN61_12790 PF13439 Glycosyltransferase Family 4 JNN61_12795 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JNN61_12800 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JNN61_12805 PF01467 Cytidylyltransferase-like JNN61_12810 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JNN61_12810 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JNN61_12810 PF06827 Zinc finger found in FPG and IleRS JNN61_12815 PF00471 Ribosomal protein L33 JNN61_12820 PF00830 Ribosomal L28 family JNN61_12825 PF04002 RadC-like JAB domain JNN61_12830 PF02441 Flavoprotein JNN61_12830 PF04127 DNA / pantothenate metabolism flavoprotein JNN61_12835 PF00692 dUTPase JNN61_12840 PF00440 Bacterial regulatory proteins, tetR family JNN61_12845 PF00156 Phosphoribosyl transferase domain JNN61_12850 PF01138 3' exoribonuclease family, domain 1 JNN61_12850 PF03725 3' exoribonuclease family, domain 2 JNN61_12855 PF03755 YicC-like family, N-terminal region JNN61_12855 PF08340 Domain of unknown function (DUF1732) JNN61_12915 PF02384 N-6 DNA Methylase JNN61_12915 PF12161 HsdM N-terminal domain JNN61_12920 PF04851 Type III restriction enzyme, res subunit JNN61_12920 PF08463 EcoEI R protein C-terminal JNN61_12920 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) JNN61_12920 PF00271 Helicase conserved C-terminal domain JNN61_12935 PF03458 UPF0126 domain JNN61_12940 PF03120 NAD-dependent DNA ligase OB-fold domain JNN61_12940 PF01653 NAD-dependent DNA ligase adenylation domain JNN61_12945 PF00625 Guanylate kinase JNN61_12950 PF01192 RNA polymerase Rpb6 JNN61_12955 PF02824 TGS domain JNN61_12955 PF13291 ACT domain JNN61_12955 PF04607 Region found in RelA / SpoT proteins JNN61_12960 PF00588 SpoU rRNA Methylase family JNN61_12960 PF12105 SpoU, rRNA methylase, C-terminal JNN61_12965 PF00271 Helicase conserved C-terminal domain JNN61_12965 PF00270 DEAD/DEAH box helicase JNN61_12965 PF17191 RecG wedge domain JNN61_12970 PF03616 Sodium/glutamate symporter JNN61_12975 PF00860 Permease family JNN61_12980 PF05170 AsmA family JNN61_12990 PF00480 ROK family JNN61_12995 PF01116 Fructose-bisphosphate aldolase class-II JNN61_13000 PF01116 Fructose-bisphosphate aldolase class-II JNN61_13005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_13010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_13015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_13015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_13015 PF02378 Phosphotransferase system, EIIC JNN61_13020 PF08279 HTH domain JNN61_13020 PF00874 PRD domain JNN61_13020 PF05043 Mga helix-turn-helix domain JNN61_13020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_13020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_13025 PF01055 Glycosyl hydrolases family 31 JNN61_13025 PF13802 Galactose mutarotase-like JNN61_13040 PF00589 Phage integrase family JNN61_13040 PF14659 Phage integrase, N-terminal SAM-like domain JNN61_13040 PF13356 Arm DNA-binding domain JNN61_13050 PF00884 Sulfatase JNN61_13070 PF13505 Outer membrane protein beta-barrel domain JNN61_13075 PF00589 Phage integrase family JNN61_13075 PF13356 Arm DNA-binding domain JNN61_13100 PF04002 RadC-like JAB domain JNN61_13130 PF13091 PLD-like domain JNN61_13140 PF06406 StbA protein JNN61_13145 PF00589 Phage integrase family JNN61_13220 PF11799 impB/mucB/samB family C-terminal domain JNN61_13220 PF00817 impB/mucB/samB family JNN61_13220 PF13438 Domain of unknown function (DUF4113) JNN61_13225 PF00717 Peptidase S24-like JNN61_13230 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JNN61_13250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_13250 PF03466 LysR substrate binding domain JNN61_13255 PF00905 Penicillin binding protein transpeptidase domain JNN61_13275 PF01420 Type I restriction modification DNA specificity domain JNN61_13280 PF12161 HsdM N-terminal domain JNN61_13280 PF02384 N-6 DNA Methylase JNN61_13285 PF08463 EcoEI R protein C-terminal JNN61_13285 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JNN61_13285 PF00271 Helicase conserved C-terminal domain JNN61_13285 PF04851 Type III restriction enzyme, res subunit JNN61_13300 PF06114 IrrE N-terminal-like domain JNN61_13380 PF01926 50S ribosome-binding GTPase JNN61_13385 PF13280 WYL domain JNN61_13385 PF08220 DeoR-like helix-turn-helix domain JNN61_13395 PF06006 Bacterial protein of unknown function (DUF905) JNN61_13400 PF06067 Domain of unknown function (DUF932) JNN61_13405 PF03230 Antirestriction protein JNN61_13410 PF04002 RadC-like JAB domain JNN61_13415 PF06174 Protein of unknown function (DUF987) JNN61_13420 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JNN61_13425 PF06755 CbtA_toxin of type IV toxin-antitoxin system JNN61_13450 PF07690 Major Facilitator Superfamily JNN61_13455 PF00892 EamA-like transporter family JNN61_13460 PF03180 NLPA lipoprotein JNN61_13470 PF07720 Tetratricopeptide repeat JNN61_13490 PF06511 Type III secretion systems tip complex components JNN61_13495 PF00486 Transcriptional regulatory protein, C terminal JNN61_13500 PF11924 Inverse autotransporter, beta-domain JNN61_13500 PF02369 Bacterial Ig-like domain (group 1) JNN61_13500 PF09134 Invasin, domain 3 JNN61_13505 PF07690 Major Facilitator Superfamily JNN61_13520 PF06711 Protein of unknown function (DUF1198) JNN61_13525 PF00860 Permease family JNN61_13530 PF13382 Adenine deaminase C-terminal domain JNN61_13530 PF01979 Amidohydrolase family JNN61_13535 PF07690 Major Facilitator Superfamily JNN61_13540 PF07690 Major Facilitator Superfamily JNN61_13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_13545 PF07730 Histidine kinase JNN61_13545 PF05231 MASE1 JNN61_13550 PF00196 Bacterial regulatory proteins, luxR family JNN61_13550 PF00072 Response regulator receiver domain JNN61_13565 PF01842 ACT domain JNN61_13570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_13570 PF00205 Thiamine pyrophosphate enzyme, central domain JNN61_13570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNN61_13575 PF08049 IlvB leader peptide JNN61_13580 PF13939 Toxin TisB, type I toxin-antitoxin system JNN61_13585 PF07690 Major Facilitator Superfamily JNN61_13595 PF02656 Domain of unknown function (DUF202) JNN61_13600 PF02656 Domain of unknown function (DUF202) JNN61_13610 PF16347 Domain of unknown function (DUF4976) JNN61_13610 PF00884 Sulfatase JNN61_13615 PF00474 Sodium:solute symporter family JNN61_13620 PF02311 AraC-like ligand binding domain JNN61_13620 PF12833 Helix-turn-helix domain JNN61_13625 PF02056 Family 4 glycosyl hydrolase JNN61_13625 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNN61_13630 PF02378 Phosphotransferase system, EIIC JNN61_13630 PF00367 phosphotransferase system, EIIB JNN61_13635 PF07702 UTRA domain JNN61_13635 PF00392 Bacterial regulatory proteins, gntR family JNN61_13640 PF06826 Predicted Permease Membrane Region JNN61_13640 PF02080 TrkA-C domain JNN61_13645 PF00011 Hsp20/alpha crystallin family JNN61_13650 PF00011 Hsp20/alpha crystallin family JNN61_13655 PF07119 Protein of unknown function (DUF1375) JNN61_13660 PF12566 Protein of unknown function (DUF3748) JNN61_13660 PF07676 WD40-like Beta Propeller Repeat JNN61_13665 PF01494 FAD binding domain JNN61_13670 PF07690 Major Facilitator Superfamily JNN61_13675 PF13378 Enolase C-terminal domain-like JNN61_13675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNN61_13680 PF01081 KDPG and KHG aldolase JNN61_13685 PF05035 2-keto-3-deoxy-galactonokinase JNN61_13690 PF07729 FCD domain JNN61_13690 PF00392 Bacterial regulatory proteins, gntR family JNN61_13705 PF06078 Bacterial protein of unknown function (DUF937) JNN61_13710 PF00204 DNA gyrase B JNN61_13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_13710 PF00986 DNA gyrase B subunit, carboxyl terminus JNN61_13710 PF18053 DNA gyrase B subunit insert domain JNN61_13710 PF01751 Toprim domain JNN61_13715 PF02463 RecF/RecN/SMC N terminal domain JNN61_13720 PF02767 DNA polymerase III beta subunit, central domain JNN61_13720 PF00712 DNA polymerase III beta subunit, N-terminal domain JNN61_13720 PF02768 DNA polymerase III beta subunit, C-terminal domain JNN61_13725 PF08299 Bacterial dnaA protein helix-turn-helix JNN61_13725 PF11638 DnaA N-terminal domain JNN61_13725 PF00308 Bacterial dnaA protein JNN61_13735 PF00468 Ribosomal protein L34 JNN61_13740 PF00825 Ribonuclease P JNN61_13745 PF01809 Putative membrane protein insertion efficiency factor JNN61_13750 PF14849 YidC periplasmic domain JNN61_13750 PF02096 60Kd inner membrane protein JNN61_13755 PF01926 50S ribosome-binding GTPase JNN61_13755 PF12631 MnmE helical domain JNN61_13755 PF10396 GTP-binding protein TrmE N-terminus JNN61_13765 PF08053 Tryptophanase operon leader peptide JNN61_13770 PF01212 Beta-eliminating lyase JNN61_13775 PF03222 Tryptophan/tyrosine permease family JNN61_13780 PF07690 Major Facilitator Superfamily JNN61_13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_13785 PF03466 LysR substrate binding domain JNN61_13795 PF03358 NADPH-dependent FMN reductase JNN61_13800 PF00860 Permease family JNN61_13805 PF13419 Haloacid dehalogenase-like hydrolase JNN61_13825 PF01895 PhoU domain JNN61_13830 PF00005 ABC transporter JNN61_13835 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_13840 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_13845 PF12849 PBP superfamily domain JNN61_13860 PF00186 Dihydrofolate reductase JNN61_13865 PF00583 Acetyltransferase (GNAT) family JNN61_13870 PF01909 Nucleotidyltransferase domain JNN61_13870 PF13427 Domain of unknown function (DUF4111) JNN61_13895 PF18623 TnsE C-terminal domain JNN61_13900 PF15978 Tn7-like transposition protein D JNN61_13900 PF06527 TniQ JNN61_13905 PF11426 Tn7 transposition regulator TnsC JNN61_13905 PF13401 AAA domain JNN61_13910 PF00665 Integrase core domain JNN61_13915 PF08721 TnsA endonuclease C terminal JNN61_13915 PF08722 TnsA endonuclease N terminal JNN61_13920 PF01380 SIS domain JNN61_13925 PF12804 MobA-like NTP transferase domain JNN61_13925 PF14602 Hexapeptide repeat of succinyl-transferase JNN61_13925 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_13930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JNN61_13930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JNN61_13935 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNN61_13935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNN61_13940 PF00231 ATP synthase JNN61_13945 PF00306 ATP synthase alpha/beta chain, C terminal domain JNN61_13945 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNN61_13945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNN61_13950 PF00213 ATP synthase delta (OSCP) subunit JNN61_13955 PF00430 ATP synthase B/B' CF(0) JNN61_13960 PF00137 ATP synthase subunit C JNN61_13965 PF00119 ATP synthase A chain JNN61_13970 PF03899 ATP synthase I chain JNN61_13975 PF02527 rRNA small subunit methyltransferase G JNN61_13980 PF01134 Glucose inhibited division protein A JNN61_13980 PF13932 GidA associated domain JNN61_13985 PF00258 Flavodoxin JNN61_13990 PF01037 Lrp/AsnC ligand binding domain JNN61_13995 PF03590 Aspartate-ammonia ligase JNN61_14000 PF05762 VWA domain containing CoxE-like protein JNN61_14005 PF12592 Protein of unknown function (DUF3763) JNN61_14005 PF07728 AAA domain (dynein-related subfamily) JNN61_14005 PF17868 AAA lid domain JNN61_14010 PF02705 K+ potassium transporter JNN61_14015 PF05025 RbsD / FucU transport protein family JNN61_14020 PF00005 ABC transporter JNN61_14025 PF02653 Branched-chain amino acid transport system / permease component JNN61_14030 PF13407 Periplasmic binding protein domain JNN61_14035 PF00294 pfkB family carbohydrate kinase JNN61_14040 PF00356 Bacterial regulatory proteins, lacI family JNN61_14045 PF07690 Major Facilitator Superfamily JNN61_14050 PF00392 Bacterial regulatory proteins, gntR family JNN61_14050 PF07729 FCD domain JNN61_14085 PF03466 LysR substrate binding domain JNN61_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_14090 PF04219 Protein of unknown function, DUF JNN61_14095 PF01078 Magnesium chelatase, subunit ChlI JNN61_14095 PF13335 Magnesium chelatase, subunit ChlI C-terminal JNN61_14100 PF08046 IlvGEDA operon leader peptide JNN61_14110 PF00205 Thiamine pyrophosphate enzyme, central domain JNN61_14110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNN61_14110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_14120 PF01063 Amino-transferase class IV JNN61_14125 PF00920 Dehydratase family JNN61_14130 PF00585 C-terminal regulatory domain of Threonine dehydratase JNN61_14130 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_14135 PF03466 LysR substrate binding domain JNN61_14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_14140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JNN61_14140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JNN61_14150 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JNN61_14155 PF13361 UvrD-like helicase C-terminal domain JNN61_14155 PF00580 UvrD/REP helicase N-terminal domain JNN61_14160 PF02541 Ppx/GppA phosphatase family JNN61_14165 PF00271 Helicase conserved C-terminal domain JNN61_14165 PF00270 DEAD/DEAH box helicase JNN61_14170 PF00085 Thioredoxin JNN61_14180 PF07498 Rho termination factor, N-terminal domain JNN61_14180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNN61_14180 PF07497 Rho termination factor, RNA-binding domain JNN61_14185 PF00953 Glycosyl transferase family 4 JNN61_14190 PF02706 Chain length determinant protein JNN61_14195 PF02350 UDP-N-acetylglucosamine 2-epimerase JNN61_14200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JNN61_14200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JNN61_14200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JNN61_14205 PF16363 GDP-mannose 4,6 dehydratase JNN61_14210 PF00483 Nucleotidyl transferase JNN61_14220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JNN61_14225 PF01943 Polysaccharide biosynthesis protein JNN61_14230 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 JNN61_14235 PF06899 WzyE protein, O-antigen assembly polymerase JNN61_14240 PF03808 Glycosyl transferase WecB/TagA/CpsF family JNN61_14245 PF00324 Amino acid permease JNN61_14270 PF04055 Radical SAM superfamily JNN61_14270 PF13186 Iron-sulfur cluster-binding domain JNN61_14275 PF00884 Sulfatase JNN61_14280 PF07719 Tetratricopeptide repeat JNN61_14280 PF07219 HemY protein N-terminus JNN61_14285 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JNN61_14290 PF02602 Uroporphyrinogen-III synthase HemD JNN61_14295 PF03900 Porphobilinogen deaminase, C-terminal domain JNN61_14295 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JNN61_14300 PF12633 Adenylate cyclase NT domain JNN61_14300 PF01295 Adenylate cyclase, class-I JNN61_14305 PF01491 Frataxin-like domain JNN61_14315 PF13627 Prokaryotic lipoprotein-attachment site JNN61_14320 PF01678 Diaminopimelate epimerase JNN61_14325 PF04340 Protein of unknown function, DUF484 JNN61_14330 PF02899 Phage integrase, N-terminal SAM-like domain JNN61_14330 PF00589 Phage integrase family JNN61_14335 PF13419 Haloacid dehalogenase-like hydrolase JNN61_14340 PF13361 UvrD-like helicase C-terminal domain JNN61_14340 PF00580 UvrD/REP helicase N-terminal domain JNN61_14345 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase JNN61_14355 PF01544 CorA-like Mg2+ transporter protein JNN61_14370 PF00892 EamA-like transporter family JNN61_14375 PF03061 Thioesterase superfamily JNN61_14380 PF02253 Phospholipase A1 JNN61_14385 PF16124 RecQ zinc-binding JNN61_14385 PF00270 DEAD/DEAH box helicase JNN61_14385 PF00271 Helicase conserved C-terminal domain JNN61_14385 PF09382 RQC domain JNN61_14385 PF00570 HRDC domain JNN61_14390 PF01810 LysE type translocator JNN61_14395 PF01810 LysE type translocator JNN61_14400 PF12146 Serine aminopeptidase, S33 JNN61_14410 PF00892 EamA-like transporter family JNN61_14415 PF03466 LysR substrate binding domain JNN61_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_14420 PF01717 Cobalamin-independent synthase, Catalytic domain JNN61_14420 PF08267 Cobalamin-independent synthase, N-terminal domain JNN61_14430 PF05638 Type VI secretion system effector, Hcp JNN61_14435 PF01738 Dienelactone hydrolase family JNN61_14440 PF01048 Phosphorylase superfamily JNN61_14445 PF02646 RmuC family JNN61_14450 PF01209 ubiE/COQ5 methyltransferase family JNN61_14455 PF02036 SCP-2 sterol transfer family JNN61_14460 PF03109 ABC1 family JNN61_14465 PF02416 mttA/Hcf106 family JNN61_14475 PF00902 Sec-independent protein translocase protein (TatC) JNN61_14480 PF01026 TatD related DNase JNN61_14485 PF02357 Transcription termination factor nusG JNN61_14490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JNN61_14495 PF00970 Oxidoreductase FAD-binding domain JNN61_14495 PF00175 Oxidoreductase NAD-binding domain JNN61_14500 PF02803 Thiolase, C-terminal domain JNN61_14500 PF00108 Thiolase, N-terminal domain JNN61_14505 PF00378 Enoyl-CoA hydratase/isomerase JNN61_14505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JNN61_14505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JNN61_14510 PF00557 Metallopeptidase family M24 JNN61_14515 PF09186 Domain of unknown function (DUF1949) JNN61_14515 PF01205 Uncharacterized protein family UPF0029 JNN61_14520 PF02386 Cation transport protein JNN61_14525 PF12724 Flavodoxin domain JNN61_14555 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JNN61_14560 PF12804 MobA-like NTP transferase domain JNN61_14565 PF06288 Protein of unknown function (DUF1040) JNN61_14570 PF01636 Phosphotransferase enzyme family JNN61_14575 PF01323 DSBA-like thioredoxin domain JNN61_14580 PF06097 Bacterial protein of unknown function (DUF945) JNN61_14585 PF01553 Acyltransferase JNN61_14590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JNN61_14590 PF00476 DNA polymerase family A JNN61_14590 PF01612 3'-5' exonuclease JNN61_14590 PF01367 5'-3' exonuclease, C-terminal SAM fold JNN61_14595 PF01926 50S ribosome-binding GTPase JNN61_14600 PF04220 Der GTPase activator (YihI) JNN61_14605 PF06969 HemN C-terminal domain JNN61_14605 PF04055 Radical SAM superfamily JNN61_14615 PF02954 Bacterial regulatory protein, Fis family JNN61_14615 PF00072 Response regulator receiver domain JNN61_14615 PF00158 Sigma-54 interaction domain JNN61_14620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_14620 PF00512 His Kinase A (phospho-acceptor) domain JNN61_14620 PF00989 PAS fold JNN61_14625 PF00120 Glutamine synthetase, catalytic domain JNN61_14625 PF03951 Glutamine synthetase, beta-Grasp domain JNN61_14630 PF03144 Elongation factor Tu domain 2 JNN61_14630 PF00009 Elongation factor Tu GTP binding domain JNN61_14630 PF00679 Elongation factor G C-terminus JNN61_14635 PF07702 UTRA domain JNN61_14635 PF00392 Bacterial regulatory proteins, gntR family JNN61_14640 PF01261 Xylose isomerase-like TIM barrel JNN61_14645 PF07690 Major Facilitator Superfamily JNN61_14650 PF06178 Oligogalacturonate-specific porin protein (KdgM) JNN61_14665 PF01055 Glycosyl hydrolases family 31 JNN61_14675 PF01263 Aldose 1-epimerase JNN61_14685 PF01791 DeoC/LacD family aldolase JNN61_14690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNN61_14690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNN61_14695 PF00294 pfkB family carbohydrate kinase JNN61_14700 PF08220 DeoR-like helix-turn-helix domain JNN61_14700 PF00455 DeoR C terminal sensor domain JNN61_14705 PF13419 Haloacid dehalogenase-like hydrolase JNN61_14710 PF03631 Virulence factor BrkB JNN61_14715 PF02580 D-Tyr-tRNA(Tyr) deacylase JNN61_14720 PF09500 Putative thioesterase (yiiD_Cterm) JNN61_14720 PF00583 Acetyltransferase (GNAT) family JNN61_14730 PF07859 alpha/beta hydrolase fold JNN61_14735 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system JNN61_14755 PF01402 Ribbon-helix-helix protein, copG family JNN61_14765 PF04216 Protein involved in formate dehydrogenase formation JNN61_14770 PF01292 Prokaryotic cytochrome b561 JNN61_14775 PF09163 Formate dehydrogenase N, transmembrane JNN61_14775 PF13247 4Fe-4S dicluster domain JNN61_14785 PF02634 FdhD/NarQ family JNN61_14795 PF08279 HTH domain JNN61_14795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_14800 PF05343 M42 glutamyl aminopeptidase JNN61_14805 PF02378 Phosphotransferase system, EIIC JNN61_14805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_14810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_14820 PF05336 L-rhamnose mutarotase JNN61_14825 PF00596 Class II Aldolase and Adducin N-terminal domain JNN61_14830 PF06134 L-rhamnose isomerase (RhaA) JNN61_14835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_14835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_14840 PF12833 Helix-turn-helix domain JNN61_14840 PF02311 AraC-like ligand binding domain JNN61_14845 PF12833 Helix-turn-helix domain JNN61_14845 PF02311 AraC-like ligand binding domain JNN61_14850 PF06379 L-rhamnose-proton symport protein (RhaT) JNN61_14855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JNN61_14855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JNN61_14860 PF03812 2-keto-3-deoxygluconate permease JNN61_14865 PF03475 3-alpha domain JNN61_14865 PF03473 MOSC domain JNN61_14870 PF00512 His Kinase A (phospho-acceptor) domain JNN61_14870 PF16527 Two-component sensor protein CpxA, periplasmic domain JNN61_14870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_14870 PF00672 HAMP domain JNN61_14875 PF00072 Response regulator receiver domain JNN61_14875 PF00486 Transcriptional regulatory protein, C terminal JNN61_14880 PF07813 LTXXQ motif family protein JNN61_14885 PF01545 Cation efflux family JNN61_14885 PF16916 Dimerisation domain of Zinc Transporter JNN61_14890 PF00365 Phosphofructokinase JNN61_14900 PF02611 CDP-diacylglycerol pyrophosphatase JNN61_14905 PF00121 Triosephosphate isomerase JNN61_14910 PF07305 Protein of unknown function (DUF1454) JNN61_14915 PF05656 Protein of unknown function (DUF805) JNN61_14920 PF04175 Protein of unknown function (DUF406) JNN61_14925 PF00582 Universal stress protein family JNN61_14930 PF00970 Oxidoreductase FAD-binding domain JNN61_14930 PF00175 Oxidoreductase NAD-binding domain JNN61_14935 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JNN61_14940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_14940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_14945 PF00230 Major intrinsic protein JNN61_14950 PF06005 Cell division protein ZapB JNN61_14955 PF03737 Aldolase/RraA JNN61_14960 PF01040 UbiA prenyltransferase family JNN61_14965 PF10431 C-terminal, D2-small domain, of ClpB protein JNN61_14965 PF07724 AAA domain (Cdc48 subfamily) JNN61_14965 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_14970 PF00227 Proteasome subunit JNN61_14975 PF05036 Sporulation related domain JNN61_14980 PF00356 Bacterial regulatory proteins, lacI family JNN61_14985 PF17764 3′ DNA-binding domain (3′BD) JNN61_14985 PF00271 Helicase conserved C-terminal domain JNN61_14985 PF18074 Primosomal protein N C-terminal domain JNN61_14985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JNN61_14985 PF00270 DEAD/DEAH box helicase JNN61_14990 PF01197 Ribosomal protein L31 JNN61_14995 PF05593 RHS Repeat JNN61_14995 PF03527 RHS protein JNN61_14995 PF15606 Bacterial toxin 34 JNN61_15030 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JNN61_15035 PF01340 Met Apo-repressor, MetJ JNN61_15040 PF01053 Cys/Met metabolism PLP-dependent enzyme JNN61_15045 PF00696 Amino acid kinase family JNN61_15045 PF03447 Homoserine dehydrogenase, NAD binding domain JNN61_15045 PF00742 Homoserine dehydrogenase JNN61_15060 PF02219 Methylenetetrahydrofolate reductase JNN61_15065 PF00141 Peroxidase JNN61_15070 PF00892 EamA-like transporter family JNN61_15075 PF06940 Domain of unknown function (DUF1287) JNN61_15080 PF00465 Iron-containing alcohol dehydrogenase JNN61_15085 PF00923 Transaldolase/Fructose-6-phosphate aldolase JNN61_15090 PF00381 PTS HPr component phosphorylation site JNN61_15090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_15090 PF02896 PEP-utilising enzyme, TIM barrel domain JNN61_15090 PF05524 PEP-utilising enzyme, N-terminal JNN61_15090 PF00391 PEP-utilising enzyme, mobile domain JNN61_15100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_15105 PF01228 Glycine radical JNN61_15105 PF02901 Pyruvate formate lyase-like JNN61_15110 PF04055 Radical SAM superfamily JNN61_15115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_15120 PF12833 Helix-turn-helix domain JNN61_15125 PF00884 Sulfatase JNN61_15130 PF00311 Phosphoenolpyruvate carboxylase JNN61_15135 PF07687 Peptidase dimerisation domain JNN61_15135 PF01546 Peptidase family M20/M25/M40 JNN61_15140 PF02774 Semialdehyde dehydrogenase, dimerisation domain JNN61_15140 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNN61_15145 PF00696 Amino acid kinase family JNN61_15150 PF14698 Argininosuccinate lyase C-terminal JNN61_15150 PF00206 Lyase JNN61_15155 PF00596 Class II Aldolase and Adducin N-terminal domain JNN61_15160 PF08220 DeoR-like helix-turn-helix domain JNN61_15160 PF00455 DeoR C terminal sensor domain JNN61_15170 PF00005 ABC transporter JNN61_15175 PF02653 Branched-chain amino acid transport system / permease component JNN61_15180 PF02653 Branched-chain amino acid transport system / permease component JNN61_15185 PF01261 Xylose isomerase-like TIM barrel JNN61_15190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNN61_15190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_15195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNN61_15195 PF13378 Enolase C-terminal domain-like JNN61_15200 PF07690 Major Facilitator Superfamily JNN61_15205 PF03466 LysR substrate binding domain JNN61_15205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_15210 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_15210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNN61_15215 PF00440 Bacterial regulatory proteins, tetR family JNN61_15220 PF07226 Protein of unknown function (DUF1422) JNN61_15225 PF05958 tRNA (Uracil-5-)-methyltransferase JNN61_15230 PF07715 TonB-dependent Receptor Plug Domain JNN61_15230 PF00593 TonB dependent receptor JNN61_15235 PF01177 Asp/Glu/Hydantoin racemase JNN61_15260 PF01565 FAD binding domain JNN61_15260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JNN61_15265 PF08279 HTH domain JNN61_15265 PF03099 Biotin/lipoate A/B protein ligase family JNN61_15265 PF02237 Biotin protein ligase C terminal domain JNN61_15270 PF00485 Phosphoribulokinase / Uridine kinase family JNN61_15295 PF03143 Elongation factor Tu C-terminal domain JNN61_15295 PF03144 Elongation factor Tu domain 2 JNN61_15295 PF00009 Elongation factor Tu GTP binding domain JNN61_15300 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JNN61_15305 PF00467 KOW motif JNN61_15305 PF02357 Transcription termination factor nusG JNN61_15310 PF00298 Ribosomal protein L11, RNA binding domain JNN61_15310 PF03946 Ribosomal protein L11, N-terminal domain JNN61_15315 PF00687 Ribosomal protein L1p/L10e family JNN61_15320 PF00466 Ribosomal protein L10 JNN61_15325 PF16320 Ribosomal protein L7/L12 dimerisation domain JNN61_15325 PF00542 Ribosomal protein L7/L12 C-terminal domain JNN61_15330 PF04560 RNA polymerase Rpb2, domain 7 JNN61_15330 PF00562 RNA polymerase Rpb2, domain 6 JNN61_15330 PF04561 RNA polymerase Rpb2, domain 2 JNN61_15330 PF10385 RNA polymerase beta subunit external 1 domain JNN61_15330 PF04565 RNA polymerase Rpb2, domain 3 JNN61_15330 PF04563 RNA polymerase beta subunit JNN61_15335 PF04997 RNA polymerase Rpb1, domain 1 JNN61_15335 PF00623 RNA polymerase Rpb1, domain 2 JNN61_15335 PF05000 RNA polymerase Rpb1, domain 4 JNN61_15335 PF04983 RNA polymerase Rpb1, domain 3 JNN61_15335 PF04998 RNA polymerase Rpb1, domain 5 JNN61_15345 PF04055 Radical SAM superfamily JNN61_15345 PF06968 Biotin and Thiamin Synthesis associated domain JNN61_15350 PF05690 Thiazole biosynthesis protein ThiG JNN61_15355 PF02597 ThiS family JNN61_15360 PF00899 ThiF family JNN61_15365 PF02581 Thiamine monophosphate synthase JNN61_15370 PF13667 ThiC-associated domain JNN61_15370 PF01964 Radical SAM ThiC family JNN61_15375 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JNN61_15380 PF00293 NUDIX domain JNN61_15380 PF09297 NADH pyrophosphatase zinc ribbon domain JNN61_15385 PF01208 Uroporphyrinogen decarboxylase (URO-D) JNN61_15390 PF04493 Endonuclease V JNN61_15395 PF04222 Protein of unknown function (DUF416) JNN61_15400 PF00216 Bacterial DNA-binding protein JNN61_15405 PF07356 Protein of unknown function (DUF1481) JNN61_15410 PF13801 Heavy-metal resistance JNN61_15415 PF00512 His Kinase A (phospho-acceptor) domain JNN61_15415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_15420 PF02954 Bacterial regulatory protein, Fis family JNN61_15420 PF00072 Response regulator receiver domain JNN61_15420 PF00158 Sigma-54 interaction domain JNN61_15425 PF02844 Phosphoribosylglycinamide synthetase, N domain JNN61_15425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JNN61_15425 PF02843 Phosphoribosylglycinamide synthetase, C domain JNN61_15430 PF01808 AICARFT/IMPCHase bienzyme JNN61_15430 PF02142 MGS-like domain JNN61_15455 PF13673 Acetyltransferase (GNAT) domain JNN61_15460 PF04204 Homoserine O-succinyltransferase JNN61_15465 PF01274 Malate synthase JNN61_15470 PF00463 Isocitrate lyase family JNN61_15475 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JNN61_15480 PF07906 ShET2 enterotoxin, N-terminal region JNN61_15485 PF09339 IclR helix-turn-helix domain JNN61_15485 PF01614 Bacterial transcriptional regulator JNN61_15490 PF02607 B12 binding domain JNN61_15490 PF02965 Vitamin B12 dependent methionine synthase, activation domain JNN61_15490 PF00809 Pterin binding enzyme JNN61_15490 PF02310 B12 binding domain JNN61_15490 PF02574 Homocysteine S-methyltransferase JNN61_15495 PF02690 Na+/Pi-cotransporter JNN61_15500 PF03575 Peptidase family S51 JNN61_15505 PF00107 Zinc-binding dehydrogenase JNN61_15505 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_15510 PF03613 PTS system mannose/fructose/sorbose family IID component JNN61_15515 PF03609 PTS system sorbose-specific iic component JNN61_15520 PF03830 PTS system sorbose subfamily IIB component JNN61_15525 PF03610 PTS system fructose IIA component JNN61_15530 PF00106 short chain dehydrogenase JNN61_15535 PF04198 Putative sugar-binding domain JNN61_15535 PF13936 Helix-turn-helix domain JNN61_15540 PF00849 RNA pseudouridylate synthase JNN61_15540 PF01479 S4 domain JNN61_15545 PF11656 YjbD family (DUF3811) JNN61_15550 PF01842 ACT domain JNN61_15550 PF00696 Amino acid kinase family JNN61_15555 PF00342 Phosphoglucose isomerase JNN61_15560 PF11106 Exopolysaccharide production protein YjbE JNN61_15565 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF JNN61_15570 PF06251 Capsule biosynthesis GfcC JNN61_15575 PF06082 Exopolysaccharide biosynthesis protein YbjH JNN61_15580 PF17089 Uncharacterised protein family JNN61_15590 PF06146 Phosphate-starvation-inducible E JNN61_15595 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_15600 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_15600 PF14785 Maltose transport system permease protein MalF P2 domain JNN61_15605 PF01547 Bacterial extracellular solute-binding protein JNN61_15610 PF17912 MalK OB fold domain JNN61_15610 PF00005 ABC transporter JNN61_15615 PF02264 LamB porin JNN61_15620 PF07148 Maltose operon periplasmic protein precursor (MalM) JNN61_15625 PF13981 SopA-like central domain JNN61_15625 PF13599 Pentapeptide repeats (9 copies) JNN61_15630 PF04345 Chorismate lyase JNN61_15635 PF01040 UbiA prenyltransferase family JNN61_15640 PF01553 Acyltransferase JNN61_15645 PF01219 Prokaryotic diacylglycerol kinase JNN61_15650 PF00717 Peptidase S24-like JNN61_15650 PF01726 LexA DNA binding domain JNN61_15655 PF01554 MatE JNN61_15660 PF05532 CsbD-like JNN61_15665 PF01475 Ferric uptake regulator family JNN61_15670 PF10897 Protein of unknown function (DUF2713) JNN61_15675 PF01207 Dihydrouridine synthase (Dus) JNN61_15680 PF09583 Phage shock protein G (Phageshock_PspG) JNN61_15685 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_15685 PF00107 Zinc-binding dehydrogenase JNN61_15690 PF00772 DnaB-like helicase N terminal domain JNN61_15690 PF03796 DnaB-like helicase C terminal domain JNN61_15695 PF01168 Alanine racemase, N-terminal domain JNN61_15695 PF00842 Alanine racemase, C-terminal domain JNN61_15700 PF00155 Aminotransferase class I and II JNN61_15710 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JNN61_15715 PF01894 Uncharacterised protein family UPF0047 JNN61_15720 PF04237 YjbR JNN61_15725 PF17755 UvrA DNA-binding domain JNN61_15725 PF17760 UvrA interaction domain JNN61_15725 PF00005 ABC transporter JNN61_15730 PF00436 Single-strand binding protein family JNN61_15735 PF15940 Family of unknown function JNN61_15740 PF00563 EAL domain JNN61_15740 PF12792 CSS motif domain associated with EAL JNN61_15745 PF12833 Helix-turn-helix domain JNN61_15750 PF00376 MerR family regulatory protein JNN61_15750 PF09278 MerR, DNA binding JNN61_15755 PF00860 Permease family JNN61_15760 PF00999 Sodium/hydrogen exchanger family JNN61_15765 PF00805 Pentapeptide repeats (8 copies) JNN61_15770 PF00474 Sodium:solute symporter family JNN61_15775 PF04341 Protein of unknown function, DUF485 JNN61_15780 PF13193 AMP-binding enzyme C-terminal domain JNN61_15780 PF16177 Acetyl-coenzyme A synthetase N-terminus JNN61_15780 PF00501 AMP-binding enzyme JNN61_15785 PF02335 Cytochrome c552 JNN61_15790 PF13435 Cytochrome c554 and c-prime JNN61_15790 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) JNN61_15795 PF00037 4Fe-4S binding domain JNN61_15795 PF13247 4Fe-4S dicluster domain JNN61_15800 PF03916 Polysulphide reductase, NrfD JNN61_15805 PF01578 Cytochrome C assembly protein JNN61_15805 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JNN61_15810 PF03918 Cytochrome C biogenesis protein JNN61_15820 PF00375 Sodium:dicarboxylate symporter family JNN61_15825 PF08238 Sel1 repeat JNN61_15835 PF02321 Outer membrane efflux protein JNN61_15840 PF04632 Fusaric acid resistance protein family JNN61_15845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_15845 PF00529 HlyD membrane-fusion protein of T1SS JNN61_15850 PF17090 Uncharacterised protein family JNN61_15855 PF00753 Metallo-beta-lactamase superfamily JNN61_15855 PF14864 Alkyl sulfatase C-terminal JNN61_15855 PF14863 Alkyl sulfatase dimerisation JNN61_15860 PF02502 Ribose/Galactose Isomerase JNN61_15870 PF12706 Beta-lactamase superfamily domain JNN61_15875 PF00583 Acetyltransferase (GNAT) family JNN61_15885 PF07969 Amidohydrolase family JNN61_15890 PF00005 ABC transporter JNN61_15895 PF00005 ABC transporter JNN61_15900 PF06007 Phosphonate metabolism protein PhnJ JNN61_15905 PF05861 Bacterial phosphonate metabolism protein (PhnI) JNN61_15910 PF05845 Bacterial phosphonate metabolism protein (PhnH) JNN61_15915 PF06754 Phosphonate metabolism protein PhnG JNN61_15920 PF07702 UTRA domain JNN61_15920 PF00392 Bacterial regulatory proteins, gntR family JNN61_15925 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_15935 PF00005 ABC transporter JNN61_15940 PF06983 3-demethylubiquinone-9 3-methyltransferase JNN61_15945 PF08274 PhnA Zinc-Ribbon JNN61_15945 PF03831 PhnA domain JNN61_15950 PF00350 Dynamin family JNN61_15955 PF13990 YjcZ-like protein JNN61_15960 PF00083 Sugar (and other) transporter JNN61_15960 PF08946 Osmosensory transporter coiled coil JNN61_15970 PF00512 His Kinase A (phospho-acceptor) domain JNN61_15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_15975 PF00072 Response regulator receiver domain JNN61_15975 PF00486 Transcriptional regulatory protein, C terminal JNN61_15980 PF00884 Sulfatase JNN61_15980 PF08019 Phosphoethanolamine transferase EptA/EptB JNN61_15985 PF13520 Amino acid permease JNN61_15990 PF12833 Helix-turn-helix domain JNN61_15995 PF01276 Orn/Lys/Arg decarboxylase, major domain JNN61_15995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNN61_15995 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JNN61_16000 PF12833 Helix-turn-helix domain JNN61_16005 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNN61_16005 PF02056 Family 4 glycosyl hydrolase JNN61_16015 PF09997 Predicted membrane protein (DUF2238) JNN61_16020 PF05681 Fumarate hydratase (Fumerase) JNN61_16020 PF05683 Fumarase C-terminus JNN61_16025 PF03605 Anaerobic c4-dicarboxylate membrane transporter JNN61_16030 PF00072 Response regulator receiver domain JNN61_16035 PF00989 PAS fold JNN61_16035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JNN61_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_16035 PF17203 Single cache domain 3 JNN61_16040 PF06902 Divergent 4Fe-4S mono-cluster JNN61_16045 PF14542 GCN5-related N-acetyl-transferase JNN61_16050 PF11080 Endoribonuclease GhoS JNN61_16055 PF10753 Toxin GhoT_OrtT JNN61_16060 PF00152 tRNA synthetases class II (D, K and N) JNN61_16060 PF01336 OB-fold nucleic acid binding domain JNN61_16065 PF00854 POT family JNN61_16070 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNN61_16070 PF01276 Orn/Lys/Arg decarboxylase, major domain JNN61_16070 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JNN61_16075 PF13520 Amino acid permease JNN61_16080 PF18500 CadC C-terminal domain 1 JNN61_16080 PF00486 Transcriptional regulatory protein, C terminal JNN61_16100 PF06755 CbtA_toxin of type IV toxin-antitoxin system JNN61_16105 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JNN61_16110 PF06174 Protein of unknown function (DUF987) JNN61_16115 PF04002 RadC-like JAB domain JNN61_16120 PF03230 Antirestriction protein JNN61_16125 PF06067 Domain of unknown function (DUF932) JNN61_16130 PF06006 Bacterial protein of unknown function (DUF905) JNN61_16140 PF13280 WYL domain JNN61_16140 PF08220 DeoR-like helix-turn-helix domain JNN61_16145 PF01926 50S ribosome-binding GTPase JNN61_16165 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_16165 PF12804 MobA-like NTP transferase domain JNN61_16165 PF14602 Hexapeptide repeat of succinyl-transferase JNN61_16170 PF00294 pfkB family carbohydrate kinase JNN61_16175 PF04227 Indigoidine synthase A like protein JNN61_16180 PF01773 Na+ dependent nucleoside transporter N-terminus JNN61_16180 PF07662 Na+ dependent nucleoside transporter C-terminus JNN61_16185 PF00294 pfkB family carbohydrate kinase JNN61_16220 PF00440 Bacterial regulatory proteins, tetR family JNN61_16220 PF08361 MAATS-type transcriptional repressor, C-terminal region JNN61_16230 PF00936 BMC domain JNN61_16235 PF02772 S-adenosylmethionine synthetase, central domain JNN61_16235 PF02773 S-adenosylmethionine synthetase, C-terminal domain JNN61_16235 PF00438 S-adenosylmethionine synthetase, N-terminal domain JNN61_16240 PF12833 Helix-turn-helix domain JNN61_16245 PF06580 Histidine kinase JNN61_16245 PF02743 Cache domain JNN61_16245 PF00672 HAMP domain JNN61_16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_16265 PF04055 Radical SAM superfamily JNN61_16270 PF01228 Glycine radical JNN61_16270 PF02901 Pyruvate formate lyase-like JNN61_16275 PF01965 DJ-1/PfpI family JNN61_16285 PF00171 Aldehyde dehydrogenase family JNN61_16290 PF00936 BMC domain JNN61_16295 PF00936 BMC domain JNN61_16300 PF00871 Acetokinase family JNN61_16305 PF03928 Haem-degrading JNN61_16310 PF03319 Ethanolamine utilisation protein EutN/carboxysome JNN61_16325 PF06130 Phosphate propanoyltransferase JNN61_16330 PF00465 Iron-containing alcohol dehydrogenase JNN61_16375 PF11922 Domain of unknown function (DUF3440) JNN61_16375 PF01507 Phosphoadenosine phosphosulfate reductase family JNN61_16380 PF02195 ParB-like nuclease domain JNN61_16400 PF08494 DEAD/H associated JNN61_16400 PF00270 DEAD/DEAH box helicase JNN61_16400 PF00271 Helicase conserved C-terminal domain JNN61_16415 PF13505 Outer membrane protein beta-barrel domain JNN61_16420 PF00884 Sulfatase JNN61_16425 PF13356 Arm DNA-binding domain JNN61_16425 PF00589 Phage integrase family JNN61_16440 PF02683 Cytochrome C biogenesis protein transmembrane region JNN61_16440 PF11412 Disulphide bond corrector protein DsbC JNN61_16445 PF03091 CutA1 divalent ion tolerance protein JNN61_16450 PF03605 Anaerobic c4-dicarboxylate membrane transporter JNN61_16455 PF10415 Fumarase C C-terminus JNN61_16455 PF00206 Lyase JNN61_16460 PF04186 FxsA cytoplasmic membrane protein JNN61_16465 PF13520 Amino acid permease JNN61_16470 PF00166 Chaperonin 10 Kd subunit JNN61_16475 PF00118 TCP-1/cpn60 chaperonin family JNN61_16480 PF13698 Domain of unknown function (DUF4156) JNN61_16485 PF15922 YjeJ-like JNN61_16490 PF04055 Radical SAM superfamily JNN61_16495 PF08207 Elongation factor P (EF-P) KOW-like domain JNN61_16495 PF09285 Elongation factor P, C-terminal JNN61_16495 PF01132 Elongation factor P (EF-P) OB domain JNN61_16500 PF08085 Entericidin EcnA/B family JNN61_16505 PF08085 Entericidin EcnA/B family JNN61_16510 PF00893 Small Multidrug Resistance protein JNN61_16515 PF08212 Lipocalin-like domain JNN61_16520 PF00144 Beta-lactamase JNN61_16525 PF02313 Fumarate reductase subunit D JNN61_16530 PF02300 Fumarate reductase subunit C JNN61_16535 PF13183 4Fe-4S dicluster domain JNN61_16535 PF13085 2Fe-2S iron-sulfur cluster binding domain JNN61_16540 PF02910 Fumarate reductase flavoprotein C-term JNN61_16540 PF00890 FAD binding domain JNN61_16545 PF00152 tRNA synthetases class II (D, K and N) JNN61_16550 PF13520 Amino acid permease JNN61_16555 PF10840 Protein of unknown function (DUF2645) JNN61_16560 PF12794 Mechanosensitive ion channel inner membrane domain 1 JNN61_16560 PF00924 Mechanosensitive ion channel JNN61_16560 PF12795 Mechanosensitive ion channel porin domain JNN61_16565 PF02666 Phosphatidylserine decarboxylase JNN61_16570 PF03193 RsgA GTPase JNN61_16575 PF00929 Exonuclease JNN61_16600 PF08331 Domain of unknown function (DUF1730) JNN61_16605 PF01256 Carbohydrate kinase JNN61_16605 PF03853 YjeF-related protein N-terminus JNN61_16610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JNN61_16615 PF01520 N-acetylmuramoyl-L-alanine amidase JNN61_16620 PF01119 DNA mismatch repair protein, C-terminal domain JNN61_16620 PF08676 MutL C terminal dimerisation domain JNN61_16630 PF17209 Hfq protein JNN61_16635 PF16360 GTP-binding GTPase Middle Region JNN61_16635 PF01926 50S ribosome-binding GTPase JNN61_16635 PF13167 GTP-binding GTPase N-terminal JNN61_16640 PF12221 Bacterial membrane protein N terminal JNN61_16640 PF01145 SPFH domain / Band 7 family JNN61_16645 PF01145 SPFH domain / Band 7 family JNN61_16650 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JNN61_16655 PF00709 Adenylosuccinate synthetase JNN61_16660 PF02082 Transcriptional regulator JNN61_16665 PF00575 S1 RNA binding domain JNN61_16665 PF00773 RNB domain JNN61_16665 PF08206 Ribonuclease B OB domain JNN61_16665 PF08461 Ribonuclease R winged-helix domain JNN61_16665 PF17876 Cold shock domain JNN61_16670 PF08032 RNA 2'-O ribose methyltransferase substrate binding JNN61_16670 PF00588 SpoU rRNA Methylase family JNN61_16675 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) JNN61_16680 PF04012 PspA/IM30 family JNN61_16685 PF10679 Protein of unknown function (DUF2491) JNN61_16690 PF03994 Domain of Unknown Function (DUF350) JNN61_16695 PF06693 Protein of unknown function (DUF1190) JNN61_16700 PF03738 Glutathionylspermidine synthase preATP-grasp JNN61_16705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNN61_16705 PF18158 Adaptive response protein AidB N-terminal domain JNN61_16705 PF02770 Acyl-CoA dehydrogenase, middle domain JNN61_16710 PF07338 Protein of unknown function (DUF1471) JNN61_16715 PF07338 Protein of unknown function (DUF1471) JNN61_16720 PF00326 Prolyl oligopeptidase family JNN61_16725 PF00455 DeoR C terminal sensor domain JNN61_16725 PF08220 DeoR-like helix-turn-helix domain JNN61_16735 PF03611 PTS system sugar-specific permease component JNN61_16740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_16745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_16750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JNN61_16755 PF01261 Xylose isomerase-like TIM barrel JNN61_16760 PF00596 Class II Aldolase and Adducin N-terminal domain JNN61_16765 PF07338 Protein of unknown function (DUF1471) JNN61_16770 PF01250 Ribosomal protein S6 JNN61_16775 PF00436 Single-strand binding protein family JNN61_16780 PF01084 Ribosomal protein S18 JNN61_16785 PF03948 Ribosomal protein L9, C-terminal domain JNN61_16785 PF01281 Ribosomal protein L9, N-terminal domain JNN61_16790 PF10887 Protein of unknown function (DUF2686) JNN61_16805 PF01385 Probable transposase JNN61_16805 PF07282 Putative transposase DNA-binding domain JNN61_16805 PF12323 Helix-turn-helix domain JNN61_16815 PF08525 Opacity-associated protein A N-terminal motif JNN61_16815 PF04225 Opacity-associated protein A LysM-like domain JNN61_16820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JNN61_16820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JNN61_16825 PF00324 Amino acid permease JNN61_16830 PF04405 Domain of Unknown function (DUF542) JNN61_16830 PF01814 Hemerythrin HHE cation binding domain JNN61_16835 PF00892 EamA-like transporter family JNN61_16840 PF05368 NmrA-like family JNN61_16845 PF01638 HxlR-like helix-turn-helix JNN61_16850 PF02872 5'-nucleotidase, C-terminal domain JNN61_16850 PF00149 Calcineurin-like phosphoesterase JNN61_16855 PF00459 Inositol monophosphatase family JNN61_16865 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JNN61_16870 PF06526 Protein of unknown function (DUF1107) JNN61_16875 PF01595 Cyclin M transmembrane N-terminal domain JNN61_16875 PF03471 Transporter associated domain JNN61_16875 PF00571 CBS domain JNN61_16880 PF01625 Peptide methionine sulfoxide reductase JNN61_16885 PF07244 Surface antigen variable number repeat JNN61_16885 PF17243 POTRA domain TamA domain 1 JNN61_16885 PF01103 Surface antigen JNN61_16890 PF04357 TamB, inner membrane protein subunit of TAM complex JNN61_16895 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JNN61_16900 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JNN61_16905 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JNN61_16910 PF00719 Inorganic pyrophosphatase JNN61_16915 PF13407 Periplasmic binding protein domain JNN61_16920 PF00005 ABC transporter JNN61_16925 PF02653 Branched-chain amino acid transport system / permease component JNN61_16930 PF02653 Branched-chain amino acid transport system / permease component JNN61_16935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JNN61_16940 PF01225 Mur ligase family, catalytic domain JNN61_16940 PF08245 Mur ligase middle domain JNN61_16940 PF02875 Mur ligase family, glutamate ligase domain JNN61_16945 PF04751 Protein of unknown function (DUF615) JNN61_16950 PF01523 Putative modulator of DNA gyrase JNN61_16955 PF07361 Cytochrome b562 JNN61_16960 PF04221 RelB antitoxin JNN61_16965 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JNN61_16975 PF03477 ATP cone domain JNN61_16975 PF13597 Anaerobic ribonucleoside-triphosphate reductase JNN61_16980 PF00128 Alpha amylase, catalytic domain JNN61_16980 PF11941 Domain of unknown function (DUF3459) JNN61_16985 PF00367 phosphotransferase system, EIIB JNN61_16985 PF02378 Phosphotransferase system, EIIC JNN61_16990 PF00356 Bacterial regulatory proteins, lacI family JNN61_16995 PF17059 MgtA leader peptide JNN61_17000 PF00689 Cation transporting ATPase, C-terminus JNN61_17000 PF00690 Cation transporter/ATPase, N-terminus JNN61_17005 PF01042 Endoribonuclease L-PSP JNN61_17010 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JNN61_17010 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JNN61_17015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JNN61_17015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JNN61_17020 PF08052 PyrBI operon leader peptide JNN61_17025 PF01042 Endoribonuclease L-PSP JNN61_17035 PF00440 Bacterial regulatory proteins, tetR family JNN61_17040 PF04074 YhcH/YjgK/YiaL JNN61_17050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JNN61_17050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JNN61_17055 PF06877 Regulator of ribonuclease activity B JNN61_17060 PF00583 Acetyltransferase (GNAT) family JNN61_17065 PF05987 Bacterial protein of unknown function (DUF898) JNN61_17070 PF10458 Valyl tRNA synthetase tRNA binding arm JNN61_17070 PF08264 Anticodon-binding domain of tRNA JNN61_17070 PF00133 tRNA synthetases class I (I, L, M and V) JNN61_17075 PF04364 DNA polymerase III chi subunit, HolC JNN61_17080 PF00883 Cytosol aminopeptidase family, catalytic domain JNN61_17080 PF02789 Cytosol aminopeptidase family, N-terminal domain JNN61_17085 PF03739 Lipopolysaccharide export system permease LptF/LptG JNN61_17090 PF03739 Lipopolysaccharide export system permease LptF/LptG JNN61_17095 PF05872 Bacterial protein of unknown function (DUF853) JNN61_17100 PF00356 Bacterial regulatory proteins, lacI family JNN61_17105 PF02447 GntP family permease JNN61_17110 PF00106 short chain dehydrogenase JNN61_17115 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_17115 PF00107 Zinc-binding dehydrogenase JNN61_17120 PF01202 Shikimate kinase JNN61_17125 PF00107 Zinc-binding dehydrogenase JNN61_17125 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_17135 PF00589 Phage integrase family JNN61_17135 PF13356 Arm DNA-binding domain JNN61_17145 PF13007 Transposase C of IS166 homeodomain JNN61_17145 PF13817 IS66 C-terminal element JNN61_17145 PF03050 Transposase IS66 family JNN61_17145 PF13005 zinc-finger binding domain of transposase IS66 JNN61_17150 PF05717 IS66 Orf2 like protein JNN61_17165 PF13505 Outer membrane protein beta-barrel domain JNN61_17175 PF03707 Bacterial signalling protein N terminal repeat JNN61_17175 PF00563 EAL domain JNN61_17175 PF00990 Diguanylate cyclase, GGDEF domain JNN61_17185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_17185 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_17190 PF00577 Outer membrane usher protein JNN61_17190 PF13954 PapC N-terminal domain JNN61_17205 PF12833 Helix-turn-helix domain JNN61_17230 PF04754 Putative transposase, YhgA-like JNN61_17235 PF04754 Putative transposase, YhgA-like JNN61_17245 PF02517 CPBP intramembrane metalloprotease JNN61_17255 PF13229 Right handed beta helix region JNN61_17265 PF07883 Cupin domain JNN61_17275 PF14583 Oligogalacturonate lyase JNN61_17305 PF02796 Helix-turn-helix domain of resolvase JNN61_17305 PF00665 Integrase core domain JNN61_17310 PF01695 IstB-like ATP binding protein JNN61_17330 PF05321 Haemolysin expression modulating protein JNN61_17360 PF07690 Major Facilitator Superfamily JNN61_17365 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JNN61_17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_17370 PF03466 LysR substrate binding domain JNN61_17380 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_17380 PF13018 Extended Signal Peptide of Type V secretion system JNN61_17380 PF03797 Autotransporter beta-domain JNN61_17385 PF06006 Bacterial protein of unknown function (DUF905) JNN61_17390 PF06067 Domain of unknown function (DUF932) JNN61_17395 PF03230 Antirestriction protein JNN61_17400 PF04002 RadC-like JAB domain JNN61_17405 PF06174 Protein of unknown function (DUF987) JNN61_17410 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JNN61_17425 PF04198 Putative sugar-binding domain JNN61_17430 PF02447 GntP family permease JNN61_17435 PF00920 Dehydratase family JNN61_17440 PF00701 Dihydrodipicolinate synthetase family JNN61_17445 PF01614 Bacterial transcriptional regulator JNN61_17450 PF00455 DeoR C terminal sensor domain JNN61_17450 PF08220 DeoR-like helix-turn-helix domain JNN61_17455 PF00834 Ribulose-phosphate 3 epimerase family JNN61_17460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNN61_17465 PF03437 BtpA family JNN61_17470 PF03611 PTS system sugar-specific permease component JNN61_17475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNN61_17480 PF05343 M42 glutamyl aminopeptidase JNN61_17495 PF13847 Methyltransferase domain JNN61_17500 PF13847 Methyltransferase domain JNN61_17505 PF00583 Acetyltransferase (GNAT) family JNN61_17510 PF09857 Putative toxin of bacterial toxin-antitoxin pair JNN61_17525 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase JNN61_17535 PF06178 Oligogalacturonate-specific porin protein (KdgM) JNN61_17540 PF00589 Phage integrase family JNN61_17545 PF00589 Phage integrase family JNN61_17550 PF00419 Fimbrial protein JNN61_17555 PF00419 Fimbrial protein JNN61_17560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_17560 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_17565 PF13954 PapC N-terminal domain JNN61_17565 PF13953 PapC C-terminal domain JNN61_17565 PF00577 Outer membrane usher protein JNN61_17570 PF00419 Fimbrial protein JNN61_17580 PF09160 FimH, mannose binding JNN61_17580 PF00419 Fimbrial protein JNN61_17585 PF02447 GntP family permease JNN61_17590 PF03786 D-mannonate dehydratase (UxuA) JNN61_17595 PF01232 Mannitol dehydrogenase Rossmann domain JNN61_17595 PF08125 Mannitol dehydrogenase C-terminal domain JNN61_17600 PF00392 Bacterial regulatory proteins, gntR family JNN61_17600 PF07729 FCD domain JNN61_17605 PF04965 Gene 25-like lysozyme JNN61_17615 PF03466 LysR substrate binding domain JNN61_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_17620 PF01979 Amidohydrolase family JNN61_17625 PF07670 Nucleoside recognition JNN61_17630 PF07670 Nucleoside recognition JNN61_17635 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family JNN61_17640 PF06779 Uncharacterised MFS-type transporter YbfB JNN61_17645 PF06977 SdiA-regulated JNN61_17650 PF11823 Protein of unknown function (DUF3343) JNN61_17655 PF01869 BadF/BadG/BcrA/BcrD ATPase family JNN61_17660 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JNN61_17665 PF13610 DDE domain JNN61_17670 PF00302 Chloramphenicol acetyltransferase JNN61_17680 PF13610 DDE domain JNN61_17700 PF13610 DDE domain JNN61_17715 PF00809 Pterin binding enzyme JNN61_17720 PF01636 Phosphotransferase enzyme family JNN61_17725 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JNN61_17735 PF13610 DDE domain JNN61_17740 PF01636 Phosphotransferase enzyme family JNN61_17745 PF13610 DDE domain JNN61_17750 PF02909 Tetracyclin repressor-like, C-terminal domain JNN61_17750 PF00440 Bacterial regulatory proteins, tetR family JNN61_17755 PF07690 Major Facilitator Superfamily JNN61_17775 PF13610 DDE domain JNN61_17780 PF04286 Protein of unknown function (DUF445) JNN61_17785 PF04754 Putative transposase, YhgA-like JNN61_17790 PF00392 Bacterial regulatory proteins, gntR family JNN61_17790 PF00155 Aminotransferase class I and II JNN61_17800 PF08845 Toxin SymE, type I toxin-antitoxin system JNN61_17805 PF18766 SWI2/SNF2 ATPase JNN61_17805 PF11867 Domain of unknown function (DUF3387) JNN61_17805 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JNN61_17810 PF01420 Type I restriction modification DNA specificity domain JNN61_17815 PF02384 N-6 DNA Methylase JNN61_17820 PF04471 Restriction endonuclease JNN61_17820 PF14338 Mrr N-terminal domain JNN61_17835 PF02492 CobW/HypB/UreG, nucleotide-binding domain JNN61_17835 PF07683 Cobalamin synthesis protein cobW C-terminal domain JNN61_17840 PF04328 Selenoprotein, putative JNN61_17845 PF13722 5TM C-terminal transporter carbon starvation CstA JNN61_17845 PF02554 Carbon starvation protein CstA JNN61_17850 PF00672 HAMP domain JNN61_17850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNN61_17850 PF02203 Tar ligand binding domain homologue JNN61_17855 PF07690 Major Facilitator Superfamily JNN61_17860 PF00392 Bacterial regulatory proteins, gntR family JNN61_17860 PF07729 FCD domain JNN61_17865 PF00107 Zinc-binding dehydrogenase JNN61_17865 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_17870 PF00884 Sulfatase JNN61_17875 PF10696 Protein of unknown function (DUF2501) JNN61_17880 PF01695 IstB-like ATP binding protein JNN61_17885 PF17948 DnaT DNA-binding domain JNN61_17890 PF12821 Threonine/Serine exporter, ThrE JNN61_17895 PF06738 Putative threonine/serine exporter JNN61_17900 PF00196 Bacterial regulatory proteins, luxR family JNN61_17905 PF00196 Bacterial regulatory proteins, luxR family JNN61_17910 PF11575 FhuF 2Fe-2S C-terminal domain JNN61_17910 PF06276 Ferric iron reductase FhuF-like transporter JNN61_17915 PF07256 Protein of unknown function (DUF1435) JNN61_17935 PF08468 Methyltransferase small domain N-terminal JNN61_17935 PF05175 Methyltransferase small domain JNN61_17940 PF03603 DNA polymerase III psi subunit JNN61_17945 PF00583 Acetyltransferase (GNAT) family JNN61_17950 PF13419 Haloacid dehalogenase-like hydrolase JNN61_17955 PF16658 Class II release factor RF3, C-terminal domain JNN61_17955 PF03144 Elongation factor Tu domain 2 JNN61_17955 PF00009 Elongation factor Tu GTP binding domain JNN61_17960 PF04972 BON domain JNN61_17965 PF07043 Protein of unknown function (DUF1328) JNN61_17970 PF01734 Patatin-like phospholipase JNN61_17975 PF01026 TatD related DNase JNN61_17980 PF04055 Radical SAM superfamily JNN61_17985 PF11230 Protein of unknown function (DUF3029) JNN61_17990 PF01791 DeoC/LacD family aldolase JNN61_17995 PF00591 Glycosyl transferase family, a/b domain JNN61_17995 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JNN61_17995 PF02885 Glycosyl transferase family, helical bundle domain JNN61_18000 PF01676 Metalloenzyme superfamily JNN61_18005 PF01048 Phosphorylase superfamily JNN61_18015 PF10437 Bacterial lipoate protein ligase C-terminus JNN61_18015 PF03099 Biotin/lipoate A/B protein ligase family JNN61_18020 PF10144 Bacterial virulence factor haemolysin JNN61_18025 PF18429 Domain of unknown function (DUF5609) JNN61_18030 PF18073 Rubredoxin metal binding domain JNN61_18035 PF01381 Helix-turn-helix JNN61_18035 PF13521 AAA domain JNN61_18040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNN61_18045 PF07338 Protein of unknown function (DUF1471) JNN61_18055 PF00106 short chain dehydrogenase JNN61_18060 PF00248 Aldo/keto reductase family JNN61_18065 PF03466 LysR substrate binding domain JNN61_18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_18070 PF00005 ABC transporter JNN61_18070 PF12848 ABC transporter JNN61_18075 PF14718 Soluble lytic murein transglycosylase L domain JNN61_18075 PF01464 Transglycosylase SLT domain JNN61_18080 PF01371 Trp repressor protein JNN61_18085 PF01931 Protein of unknown function DUF84 JNN61_18090 PF00300 Histidine phosphatase superfamily (branch 1) JNN61_18095 PF06445 GyrI-like small molecule binding domain JNN61_18095 PF12833 Helix-turn-helix domain JNN61_18100 PF05981 CreA protein JNN61_18105 PF00072 Response regulator receiver domain JNN61_18105 PF00486 Transcriptional regulatory protein, C terminal JNN61_18110 PF00672 HAMP domain JNN61_18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_18110 PF00512 His Kinase A (phospho-acceptor) domain JNN61_18115 PF06123 Inner membrane protein CreD JNN61_18120 PF00486 Transcriptional regulatory protein, C terminal JNN61_18120 PF00072 Response regulator receiver domain JNN61_18130 PF00588 SpoU rRNA Methylase family JNN61_18135 PF08254 Threonine leader peptide JNN61_18140 PF01842 ACT domain JNN61_18140 PF13840 ACT domain JNN61_18140 PF00696 Amino acid kinase family JNN61_18140 PF03447 Homoserine dehydrogenase, NAD binding domain JNN61_18140 PF00742 Homoserine dehydrogenase JNN61_18145 PF00288 GHMP kinases N terminal domain JNN61_18145 PF08544 GHMP kinases C terminal JNN61_18150 PF00291 Pyridoxal-phosphate dependent enzyme JNN61_18150 PF14821 Threonine synthase N terminus JNN61_18155 PF10697 Protein of unknown function (DUF2502) JNN61_18160 PF03883 Peroxide stress protein YaaA JNN61_18165 PF01235 Sodium:alanine symporter family JNN61_18170 PF00923 Transaldolase/Fructose-6-phosphate aldolase JNN61_18175 PF00994 Probable molybdopterin binding domain JNN61_18180 PF01184 GPR1/FUN34/yaaH family JNN61_18185 PF13099 Domain of unknown function (DUF3944) JNN61_18185 PF03981 Ubiquinol-cytochrome C chaperone JNN61_18190 PF10807 Protein of unknown function (DUF2541) JNN61_18195 PF00012 Hsp70 protein JNN61_18200 PF00226 DnaJ domain JNN61_18200 PF00684 DnaJ central domain JNN61_18200 PF01556 DnaJ C terminal domain JNN61_18205 PF01848 Hok/gef family JNN61_18210 PF06965 Na+/H+ antiporter 1 JNN61_18215 PF03466 LysR substrate binding domain JNN61_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_18225 PF00577 Outer membrane usher protein JNN61_18225 PF13953 PapC C-terminal domain JNN61_18225 PF13954 PapC N-terminal domain JNN61_18230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_18230 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_18245 PF01649 Ribosomal protein S20 JNN61_18250 PF10837 Protein of unknown function (DUF2575) JNN61_18255 PF01687 Riboflavin kinase JNN61_18255 PF06574 FAD synthetase JNN61_18260 PF00133 tRNA synthetases class I (I, L, M and V) JNN61_18260 PF06827 Zinc finger found in FPG and IleRS JNN61_18260 PF08264 Anticodon-binding domain of tRNA JNN61_18265 PF01252 Signal peptidase (SPase) II JNN61_18270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JNN61_18275 PF02401 LytB protein JNN61_18280 PF01156 Inosine-uridine preferring nucleoside hydrolase JNN61_18285 PF05173 Dihydrodipicolinate reductase, C-terminus JNN61_18285 PF01113 Dihydrodipicolinate reductase, N-terminus JNN61_18290 PF00117 Glutamine amidotransferase class-I JNN61_18290 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JNN61_18295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNN61_18295 PF02142 MGS-like domain JNN61_18295 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JNN61_18300 PF07180 CaiF/GrlA transcriptional regulator JNN61_18305 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_18310 PF00378 Enoyl-CoA hydratase/isomerase JNN61_18315 PF13193 AMP-binding enzyme C-terminal domain JNN61_18315 PF00501 AMP-binding enzyme JNN61_18320 PF02515 CoA-transferase family III JNN61_18325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNN61_18325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNN61_18325 PF02770 Acyl-CoA dehydrogenase, middle domain JNN61_18330 PF02028 BCCT, betaine/carnitine/choline family transporter JNN61_18335 PF01012 Electron transfer flavoprotein domain JNN61_18340 PF00766 Electron transfer flavoprotein FAD-binding domain JNN61_18340 PF01012 Electron transfer flavoprotein domain JNN61_18345 PF01494 FAD binding domain JNN61_18355 PF00083 Sugar (and other) transporter JNN61_18360 PF02525 Flavodoxin-like fold JNN61_18365 PF00999 Sodium/hydrogen exchanger family JNN61_18365 PF02254 TrkA-N domain JNN61_18370 PF00186 Dihydrofolate reductase JNN61_18385 PF00149 Calcineurin-like phosphoesterase JNN61_18390 PF04379 ApaG domain JNN61_18395 PF00398 Ribosomal RNA adenine dimethylase JNN61_18400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JNN61_18405 PF09312 SurA N-terminal domain JNN61_18405 PF00639 PPIC-type PPIASE domain JNN61_18410 PF04453 LPS transport system D JNN61_18410 PF03968 OstA-like protein JNN61_18415 PF00226 DnaJ domain JNN61_18415 PF05099 Tellurite resistance protein TerB JNN61_18430 PF00849 RNA pseudouridylate synthase JNN61_18435 PF18339 RapA N-terminal Tudor like domain 1 JNN61_18435 PF12137 RNA polymerase recycling family C-terminal JNN61_18435 PF00271 Helicase conserved C-terminal domain JNN61_18435 PF18337 RapA N-terminal Tudor like domain JNN61_18435 PF00176 SNF2 family N-terminal domain JNN61_18440 PF03104 DNA polymerase family B, exonuclease domain JNN61_18440 PF00136 DNA polymerase family B JNN61_18445 PF00596 Class II Aldolase and Adducin N-terminal domain JNN61_18450 PF02610 L-arabinose isomerase JNN61_18450 PF11762 L-arabinose isomerase C-terminal domain JNN61_18455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNN61_18460 PF12833 Helix-turn-helix domain JNN61_18460 PF02311 AraC-like ligand binding domain JNN61_18465 PF09335 SNARE associated Golgi protein JNN61_18470 PF00005 ABC transporter JNN61_18475 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_18490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_18490 PF12793 Sugar transport-related sRNA regulator N-term JNN61_18500 PF00694 Aconitase C-terminal domain JNN61_18505 PF00330 Aconitase family (aconitate hydratase) JNN61_18510 PF00180 Isocitrate/isopropylmalate dehydrogenase JNN61_18515 PF00682 HMGL-like JNN61_18515 PF08502 LeuA allosteric (dimerisation) domain JNN61_18520 PF08054 Leucine operon leader peptide JNN61_18525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_18525 PF03466 LysR substrate binding domain JNN61_18535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_18535 PF00205 Thiamine pyrophosphate enzyme, central domain JNN61_18535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNN61_18540 PF10369 Small subunit of acetolactate synthase JNN61_18550 PF00356 Bacterial regulatory proteins, lacI family JNN61_18550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNN61_18555 PF02381 MraZ protein, putative antitoxin-like JNN61_18560 PF01795 MraW methylase family JNN61_18565 PF04999 Cell division protein FtsL JNN61_18570 PF00905 Penicillin binding protein transpeptidase domain JNN61_18570 PF03717 Penicillin-binding Protein dimerisation domain JNN61_18575 PF08245 Mur ligase middle domain JNN61_18575 PF02875 Mur ligase family, glutamate ligase domain JNN61_18575 PF01225 Mur ligase family, catalytic domain JNN61_18580 PF08245 Mur ligase middle domain JNN61_18580 PF02875 Mur ligase family, glutamate ligase domain JNN61_18580 PF01225 Mur ligase family, catalytic domain JNN61_18585 PF00953 Glycosyl transferase family 4 JNN61_18585 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JNN61_18590 PF08245 Mur ligase middle domain JNN61_18590 PF02875 Mur ligase family, glutamate ligase domain JNN61_18595 PF01098 Cell cycle protein JNN61_18600 PF03033 Glycosyltransferase family 28 N-terminal domain JNN61_18600 PF04101 Glycosyltransferase family 28 C-terminal domain JNN61_18605 PF01225 Mur ligase family, catalytic domain JNN61_18605 PF02875 Mur ligase family, glutamate ligase domain JNN61_18605 PF08245 Mur ligase middle domain JNN61_18610 PF01820 D-ala D-ala ligase N-terminus JNN61_18610 PF07478 D-ala D-ala ligase C-terminus JNN61_18615 PF08478 POTRA domain, FtsQ-type JNN61_18615 PF03799 Cell division protein FtsQ JNN61_18620 PF02491 SHS2 domain inserted in FTSA JNN61_18625 PF00091 Tubulin/FtsZ family, GTPase domain JNN61_18625 PF12327 FtsZ family, C-terminal domain JNN61_18630 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JNN61_18635 PF06558 Secretion monitor precursor protein (SecM) JNN61_18640 PF07516 SecA Wing and Scaffold domain JNN61_18640 PF02810 SEC-C motif JNN61_18640 PF07517 SecA DEAD-like domain JNN61_18640 PF01043 SecA preprotein cross-linking domain JNN61_18645 PF00293 NUDIX domain JNN61_18650 PF03884 DNA gyrase inhibitor YacG JNN61_18655 PF07072 Cell division protein JNN61_18660 PF01121 Dephospho-CoA kinase JNN61_18670 PF00478 IMP dehydrogenase / GMP reductase domain JNN61_18675 PF00482 Type II secretion system (T2SS), protein F JNN61_18680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JNN61_18680 PF00437 Type II/IV secretion system protein JNN61_18685 PF01548 Transposase JNN61_18685 PF02371 Transposase IS116/IS110/IS902 family JNN61_18690 PF07963 Prokaryotic N-terminal methylation motif JNN61_18695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JNN61_18695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JNN61_18700 PF01510 N-acetylmuramoyl-L-alanine amidase JNN61_18705 PF17113 Regulatory signalling modulator protein AmpE JNN61_18710 PF00324 Amino acid permease JNN61_18715 PF00392 Bacterial regulatory proteins, gntR family JNN61_18715 PF07729 FCD domain JNN61_18720 PF00456 Transketolase, thiamine diphosphate binding domain JNN61_18720 PF17831 Pyruvate dehydrogenase E1 component middle domain JNN61_18725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNN61_18725 PF00364 Biotin-requiring enzyme JNN61_18725 PF02817 e3 binding domain JNN61_18730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_18730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNN61_18735 PF11737 Protein of unknown function (DUF3300) JNN61_18740 PF11791 Aconitate B N-terminal domain JNN61_18740 PF06434 Aconitate hydratase 2 N-terminus JNN61_18740 PF00330 Aconitase family (aconitate hydratase) JNN61_18745 PF06062 Uncharacterised protein family (UPF0231) JNN61_18750 PF02675 S-adenosylmethionine decarboxylase JNN61_18755 PF17284 Spermidine synthase tetramerisation domain JNN61_18760 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JNN61_18765 PF07732 Multicopper oxidase JNN61_18765 PF00394 Multicopper oxidase JNN61_18765 PF07731 Multicopper oxidase JNN61_18770 PF01011 PQQ enzyme repeat JNN61_18775 PF00156 Phosphoribosyl transferase domain JNN61_18780 PF00484 Carbonic anhydrase JNN61_18785 PF00005 ABC transporter JNN61_18790 PF01061 ABC-2 type transporter JNN61_18795 PF03610 PTS system fructose IIA component JNN61_18800 PF01522 Polysaccharide deacetylase JNN61_18805 PF02261 Aspartate decarboxylase JNN61_18810 PF04754 Putative transposase, YhgA-like JNN61_18815 PF02569 Pantoate-beta-alanine ligase JNN61_18820 PF02548 Ketopantoate hydroxymethyltransferase JNN61_18825 PF00419 Fimbrial protein JNN61_18830 PF00419 Fimbrial protein JNN61_18835 PF00419 Fimbrial protein JNN61_18840 PF13953 PapC C-terminal domain JNN61_18840 PF13954 PapC N-terminal domain JNN61_18840 PF00577 Outer membrane usher protein JNN61_18845 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_18845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_18850 PF00419 Fimbrial protein JNN61_18855 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JNN61_18860 PF12627 Probable RNA and SrmB- binding site of polymerase A JNN61_18860 PF12626 Polymerase A arginine-rich C-terminus JNN61_18860 PF01743 Poly A polymerase head domain JNN61_18865 PF00749 tRNA synthetases class I (E and Q), catalytic domain JNN61_18870 PF01258 Prokaryotic dksA/traR C4-type zinc finger JNN61_18880 PF02834 LigT like Phosphoesterase JNN61_18885 PF00271 Helicase conserved C-terminal domain JNN61_18885 PF04408 Helicase associated domain (HA2) JNN61_18885 PF00270 DEAD/DEAH box helicase JNN61_18885 PF08482 ATP-dependent helicase C-terminal JNN61_18890 PF14814 Bifunctional transglycosylase second domain JNN61_18890 PF00912 Transglycosylase JNN61_18890 PF00905 Penicillin binding protein transpeptidase domain JNN61_18890 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal JNN61_18895 PF00593 TonB dependent receptor JNN61_18895 PF07715 TonB-dependent Receptor Plug Domain JNN61_18900 PF00005 ABC transporter JNN61_18905 PF01497 Periplasmic binding protein JNN61_18910 PF01032 FecCD transport family JNN61_18915 PF00202 Aminotransferase class-III JNN61_18920 PF00654 Voltage gated chloride channel JNN61_18930 PF01521 Iron-sulphur cluster biosynthesis JNN61_18935 PF03458 UPF0126 domain JNN61_18940 PF01497 Periplasmic binding protein JNN61_18945 PF01048 Phosphorylase superfamily JNN61_18950 PF01966 HD domain JNN61_18955 PF00595 PDZ domain JNN61_18960 PF17853 GGDEF-like domain JNN61_18960 PF13556 PucR C-terminal helix-turn-helix domain JNN61_18960 PF05651 Putative sugar diacid recognition JNN61_18965 PF11944 Protein of unknown function (DUF3461) JNN61_18970 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_18970 PF14602 Hexapeptide repeat of succinyl-transferase JNN61_18970 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JNN61_18975 PF01909 Nucleotidyltransferase domain JNN61_18975 PF01966 HD domain JNN61_18975 PF08335 GlnD PII-uridylyltransferase JNN61_18975 PF01842 ACT domain JNN61_18980 PF00557 Metallopeptidase family M24 JNN61_18985 PF00318 Ribosomal protein S2 JNN61_18990 PF00889 Elongation factor TS JNN61_18995 PF00696 Amino acid kinase family JNN61_19000 PF01765 Ribosome recycling factor JNN61_19005 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JNN61_19005 PF13288 DXP reductoisomerase C-terminal domain JNN61_19005 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JNN61_19010 PF01255 Putative undecaprenyl diphosphate synthase JNN61_19020 PF02163 Peptidase family M50 JNN61_19020 PF17820 PDZ domain JNN61_19025 PF07244 Surface antigen variable number repeat JNN61_19025 PF01103 Surface antigen JNN61_19030 PF03938 Outer membrane protein (OmpH-like) JNN61_19035 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_19035 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JNN61_19040 PF07977 FabA-like domain JNN61_19045 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_19045 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JNN61_19050 PF02684 Lipid-A-disaccharide synthetase JNN61_19055 PF01351 Ribonuclease HII JNN61_19060 PF01336 OB-fold nucleic acid binding domain JNN61_19060 PF14579 Helix-hairpin-helix motif JNN61_19060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JNN61_19060 PF07733 Bacterial DNA polymerase III alpha NTPase domain JNN61_19060 PF02811 PHP domain JNN61_19065 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JNN61_19070 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JNN61_19070 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNN61_19070 PF01276 Orn/Lys/Arg decarboxylase, major domain JNN61_19075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNN61_19080 PF11734 TilS substrate C-terminal domain JNN61_19080 PF01171 PP-loop family JNN61_19080 PF09179 TilS substrate binding domain JNN61_19085 PF07073 Modulator of Rho-dependent transcription termination (ROF) JNN61_19090 PF06786 Uncharacterised protein family (UPF0253) JNN61_19095 PF07152 YaeQ protein JNN61_19100 PF00472 RF-1 domain JNN61_19105 PF04170 NlpE N-terminal domain JNN61_19105 PF17185 NlpE C-terminal OB domain JNN61_19110 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JNN61_19115 PF03129 Anticodon binding domain JNN61_19115 PF04073 Aminoacyl-tRNA editing domain JNN61_19115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNN61_19120 PF18389 TrmO C-terminal domain JNN61_19120 PF01980 tRNA-methyltransferase O JNN61_19125 PF16358 RcsF lipoprotein JNN61_19130 PF03180 NLPA lipoprotein JNN61_19135 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_19140 PF00005 ABC transporter JNN61_19140 PF09383 NIL domain JNN61_19180 PF00248 Aldo/keto reductase family JNN61_19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_19185 PF03466 LysR substrate binding domain JNN61_19190 PF03372 Endonuclease/Exonuclease/phosphatase family JNN61_19195 PF08241 Methyltransferase domain JNN61_19200 PF01464 Transglycosylase SLT domain JNN61_19200 PF01476 LysM domain JNN61_19205 PF00753 Metallo-beta-lactamase superfamily JNN61_19205 PF16123 Hydroxyacylglutathione hydrolase C-terminus JNN61_19210 PF08241 Methyltransferase domain JNN61_19215 PF00075 RNase H JNN61_19220 PF00929 Exonuclease JNN61_19245 PF05638 Type VI secretion system effector, Hcp JNN61_19255 PF06761 Intracellular multiplication and human macrophage-killing JNN61_19255 PF14331 ImcF-related N-terminal domain JNN61_19255 PF06744 Type VI secretion protein IcmF C-terminal JNN61_19270 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_19270 PF07724 AAA domain (Cdc48 subfamily) JNN61_19270 PF17871 AAA lid domain JNN61_19270 PF10431 C-terminal, D2-small domain, of ClpB protein JNN61_19280 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JNN61_19300 PF05947 Type VI secretion system, TssF JNN61_19310 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JNN61_19325 PF05638 Type VI secretion system effector, Hcp JNN61_19330 PF04717 Type VI secretion system, phage-baseplate injector JNN61_19345 PF13808 DDE_Tnp_1-associated JNN61_19345 PF01609 Transposase DDE domain JNN61_19355 PF00795 Carbon-nitrogen hydrolase JNN61_19365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNN61_19365 PF02770 Acyl-CoA dehydrogenase, middle domain JNN61_19365 PF09317 Domain of unknown function (DUF1974) JNN61_19365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNN61_19370 PF13580 SIS domain JNN61_19375 PF13230 Glutamine amidotransferases class-II JNN61_19380 PF03734 L,D-transpeptidase catalytic domain JNN61_19385 PF00877 NlpC/P60 family JNN61_19405 PF00691 OmpA family JNN61_19405 PF13677 Membrane MotB of proton-channel complex MotA/MotB JNN61_19410 PF11798 IMS family HHH motif JNN61_19410 PF11799 impB/mucB/samB family C-terminal domain JNN61_19410 PF00817 impB/mucB/samB family JNN61_19420 PF13957 Toxin YafO, type II toxin-antitoxin system JNN61_19425 PF13673 Acetyltransferase (GNAT) domain JNN61_19440 PF07687 Peptidase dimerisation domain JNN61_19440 PF01546 Peptidase family M20/M25/M40 JNN61_19445 PF00156 Phosphoribosyl transferase domain JNN61_19450 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JNN61_19455 PF07417 Sigma factor-binding transcriptional regulator Crl JNN61_19460 PF00267 Gram-negative porin JNN61_19465 PF00696 Amino acid kinase family JNN61_19465 PF01472 PUA domain JNN61_19470 PF00171 Aldehyde dehydrogenase family JNN61_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_19515 PF03466 LysR substrate binding domain JNN61_19520 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JNN61_19525 PF07690 Major Facilitator Superfamily JNN61_19530 PF02625 XdhC and CoxI family JNN61_19530 PF13478 XdhC Rossmann domain JNN61_19535 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JNN61_19535 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JNN61_19540 PF03450 CO dehydrogenase flavoprotein C-terminal domain JNN61_19540 PF00941 FAD binding domain in molybdopterin dehydrogenase JNN61_19545 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_19545 PF01799 [2Fe-2S] binding domain JNN61_19545 PF10518 TAT (twin-arginine translocation) pathway signal sequence JNN61_19550 PF07274 Protein of unknown function (DUF1440) JNN61_19555 PF03692 Putative zinc- or iron-chelating domain JNN61_19570 PF16967 E-set like domain JNN61_19570 PF15976 CS1-pili formation C-terminal JNN61_19575 PF18649 EcpB C-terminal domain JNN61_19580 PF16449 Fimbrillin MatB JNN61_19585 PF00196 Bacterial regulatory proteins, luxR family JNN61_19595 PF00444 Ribosomal protein L36 JNN61_19600 PF01197 Ribosomal protein L31 JNN61_19610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNN61_19615 PF12146 Serine aminopeptidase, S33 JNN61_19620 PF03466 LysR substrate binding domain JNN61_19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_19625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_19625 PF03466 LysR substrate binding domain JNN61_19630 PF00248 Aldo/keto reductase family JNN61_19635 PF00248 Aldo/keto reductase family JNN61_19640 PF11924 Inverse autotransporter, beta-domain JNN61_19645 PF12833 Helix-turn-helix domain JNN61_19650 PF00248 Aldo/keto reductase family JNN61_19655 PF04224 Protein of unknown function, DUF417 JNN61_19660 PF07338 Protein of unknown function (DUF1471) JNN61_19665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNN61_19665 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_19670 PF12852 Cupin JNN61_19670 PF12833 Helix-turn-helix domain JNN61_19675 PF02754 Cysteine-rich domain JNN61_19680 PF11870 Domain of unknown function (DUF3390) JNN61_19680 PF13183 4Fe-4S dicluster domain JNN61_19680 PF02589 LUD domain JNN61_19685 PF02589 LUD domain JNN61_19695 PF00732 GMC oxidoreductase JNN61_19695 PF05199 GMC oxidoreductase JNN61_19700 PF00171 Aldehyde dehydrogenase family JNN61_19705 PF00440 Bacterial regulatory proteins, tetR family JNN61_19705 PF13977 BetI-type transcriptional repressor, C-terminal JNN61_19710 PF02028 BCCT, betaine/carnitine/choline family transporter JNN61_19715 PF00196 Bacterial regulatory proteins, luxR family JNN61_19715 PF00563 EAL domain JNN61_19720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_19720 PF03466 LysR substrate binding domain JNN61_19725 PF06496 Protein of unknown function (DUF1097) JNN61_19730 PF12796 Ankyrin repeats (3 copies) JNN61_19735 PF11392 Protein of unknown function (DUF2877) JNN61_19740 PF02629 CoA binding domain JNN61_19740 PF00549 CoA-ligase JNN61_19745 PF06545 Protein of unknown function (DUF1116) JNN61_19750 PF00696 Amino acid kinase family JNN61_19755 PF07969 Amidohydrolase family JNN61_19765 PF13407 Periplasmic binding protein domain JNN61_19770 PF00005 ABC transporter JNN61_19775 PF02653 Branched-chain amino acid transport system / permease component JNN61_19780 PF02653 Branched-chain amino acid transport system / permease component JNN61_19785 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_19785 PF00107 Zinc-binding dehydrogenase JNN61_19800 PF01810 LysE type translocator JNN61_19805 PF07338 Protein of unknown function (DUF1471) JNN61_19810 PF06506 Propionate catabolism activator JNN61_19810 PF00158 Sigma-54 interaction domain JNN61_19810 PF02954 Bacterial regulatory protein, Fis family JNN61_19820 PF00285 Citrate synthase, C-terminal domain JNN61_19825 PF03972 MmgE/PrpD family JNN61_19830 PF13193 AMP-binding enzyme C-terminal domain JNN61_19830 PF00501 AMP-binding enzyme JNN61_19830 PF16177 Acetyl-coenzyme A synthetase N-terminus JNN61_19835 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JNN61_19840 PF07969 Amidohydrolase family JNN61_19845 PF03466 LysR substrate binding domain JNN61_19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_19850 PF00484 Carbonic anhydrase JNN61_19855 PF02560 Cyanate lyase C-terminal domain JNN61_19860 PF07690 Major Facilitator Superfamily JNN61_19865 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_19865 PF12464 Maltose acetyltransferase JNN61_19870 PF01306 LacY proton/sugar symporter JNN61_19875 PF02929 Beta galactosidase small chain JNN61_19875 PF16353 Domain of unknown function(DUF4981) JNN61_19875 PF00703 Glycosyl hydrolases family 2 JNN61_19875 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JNN61_19875 PF02837 Glycosyl hydrolases family 2, sugar binding domain JNN61_19880 PF00356 Bacterial regulatory proteins, lacI family JNN61_19885 PF01614 Bacterial transcriptional regulator JNN61_19885 PF09339 IclR helix-turn-helix domain JNN61_19890 PF01494 FAD binding domain JNN61_19895 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JNN61_19900 PF12697 Alpha/beta hydrolase family JNN61_19905 PF01557 Fumarylacetoacetate (FAA) hydrolase family JNN61_19910 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation JNN61_19910 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNN61_19915 PF00682 HMGL-like JNN61_19915 PF07836 DmpG-like communication domain JNN61_19920 PF07690 Major Facilitator Superfamily JNN61_19925 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JNN61_19930 PF00756 Putative esterase JNN61_19935 PF00107 Zinc-binding dehydrogenase JNN61_19935 PF08240 Alcohol dehydrogenase GroES-like domain JNN61_19940 PF02583 Metal-sensitive transcriptional repressor JNN61_19950 PF00132 Bacterial transferase hexapeptide (six repeats) JNN61_19955 PF00535 Glycosyl transferase family 2 JNN61_19960 PF02585 GlcNAc-PI de-N-acetylase JNN61_19965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNN61_19970 PF00005 ABC transporter JNN61_19975 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_19980 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JNN61_19985 PF00490 Delta-aminolevulinic acid dehydratase JNN61_19990 PF03212 Pertactin JNN61_19990 PF03797 Autotransporter beta-domain JNN61_19995 PF15977 Winged helix-turn-helix DNA binding JNN61_20000 PF00144 Beta-lactamase JNN61_20005 PF05992 SbmA/BacA-like family JNN61_20010 PF07759 Protein of unknown function (DUF1615) JNN61_20015 PF10954 Protein of unknown function (DUF2755) JNN61_20020 PF10953 Protein of unknown function (DUF2754) JNN61_20025 PF01820 D-ala D-ala ligase N-terminus JNN61_20025 PF07478 D-ala D-ala ligase C-terminus JNN61_20035 PF10796 Sigma-S stabilisation anti-adaptor protein JNN61_20040 PF00245 Alkaline phosphatase JNN61_20045 PF07769 psiF repeat JNN61_20050 PF00990 Diguanylate cyclase, GGDEF domain JNN61_20050 PF05230 MASE2 domain JNN61_20055 PF14748 Pyrroline-5-carboxylate reductase dimerisation JNN61_20055 PF03807 NADP oxidoreductase coenzyme F420-dependent JNN61_20060 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JNN61_20065 PF01202 Shikimate kinase JNN61_20070 PF16362 YaiA protein JNN61_20075 PF07302 AroM protein JNN61_20080 PF06865 Pyrimidine/purine nucleoside phosphorylase JNN61_20095 PF04381 Putative exonuclease, RdgC JNN61_20100 PF00480 ROK family JNN61_20105 PF07690 Major Facilitator Superfamily JNN61_20110 PF13476 AAA domain JNN61_20115 PF00149 Calcineurin-like phosphoesterase JNN61_20115 PF12320 Type 5 capsule protein repressor C-terminal domain JNN61_20120 PF00072 Response regulator receiver domain JNN61_20120 PF00486 Transcriptional regulatory protein, C terminal JNN61_20125 PF00512 His Kinase A (phospho-acceptor) domain JNN61_20125 PF00989 PAS fold JNN61_20125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_20125 PF11808 Phosphate regulon sensor protein PhoR JNN61_20130 PF05525 Branched-chain amino acid transport protein JNN61_20135 PF01797 Transposase IS200 like JNN61_20140 PF00324 Amino acid permease JNN61_20145 PF02903 Alpha amylase, N-terminal ig-like domain JNN61_20145 PF00128 Alpha amylase, catalytic domain JNN61_20155 PF04336 Acyl carrier protein phosphodiesterase JNN61_20160 PF02547 Queuosine biosynthesis protein JNN61_20165 PF01702 Queuine tRNA-ribosyltransferase JNN61_20170 PF02699 Preprotein translocase subunit JNN61_20175 PF13721 SecD export protein N-terminal TM region JNN61_20175 PF02355 Protein export membrane protein JNN61_20175 PF07549 SecD/SecF GG Motif JNN61_20180 PF02355 Protein export membrane protein JNN61_20180 PF07549 SecD/SecF GG Motif JNN61_20185 PF01844 HNH endonuclease JNN61_20190 PF03502 Nucleoside-specific channel-forming protein, Tsx JNN61_20205 PF01385 Probable transposase JNN61_20205 PF07282 Putative transposase DNA-binding domain JNN61_20205 PF12323 Helix-turn-helix domain JNN61_20215 PF03477 ATP cone domain JNN61_20220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNN61_20220 PF01872 RibD C-terminal domain JNN61_20225 PF00885 6,7-dimethyl-8-ribityllumazine synthase JNN61_20230 PF01029 NusB family JNN61_20235 PF00586 AIR synthase related protein, N-terminal domain JNN61_20235 PF02769 AIR synthase related protein, C-terminal domain JNN61_20240 PF04608 Phosphatidylglycerophosphatase A JNN61_20250 PF00248 Aldo/keto reductase family JNN61_20255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JNN61_20255 PF02780 Transketolase, C-terminal domain JNN61_20255 PF02779 Transketolase, pyrimidine binding domain JNN61_20260 PF00348 Polyprenyl synthetase JNN61_20265 PF02609 Exonuclease VII small subunit JNN61_20270 PF02568 Thiamine biosynthesis protein (ThiI) JNN61_20270 PF02926 THUMP domain JNN61_20275 PF01965 DJ-1/PfpI family JNN61_20280 PF08546 Ketopantoate reductase PanE/ApbA C terminal JNN61_20280 PF02558 Ketopantoate reductase PanE/ApbA JNN61_20285 PF04461 Protein of unknown function (DUF520) JNN61_20290 PF07690 Major Facilitator Superfamily JNN61_20295 PF01040 UbiA prenyltransferase family JNN61_20300 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JNN61_20305 PF00510 Cytochrome c oxidase subunit III JNN61_20310 PF00115 Cytochrome C and Quinol oxidase polypeptide I JNN61_20315 PF06481 COX Aromatic Rich Motif JNN61_20315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JNN61_20320 PF07690 Major Facilitator Superfamily JNN61_20325 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JNN61_20325 PF03923 Uncharacterized lipoprotein JNN61_20330 PF01722 BolA-like protein JNN61_20335 PF05697 Bacterial trigger factor protein (TF) JNN61_20335 PF05698 Bacterial trigger factor protein (TF) C-terminus JNN61_20335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JNN61_20340 PF00574 Clp protease JNN61_20345 PF10431 C-terminal, D2-small domain, of ClpB protein JNN61_20345 PF07724 AAA domain (Cdc48 subfamily) JNN61_20345 PF06689 ClpX C4-type zinc finger JNN61_20350 PF05362 Lon protease (S16) C-terminal proteolytic domain JNN61_20350 PF02190 ATP-dependent protease La (LON) substrate-binding domain JNN61_20350 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_20355 PF00216 Bacterial DNA-binding protein JNN61_20360 PF13145 PPIC-type PPIASE domain JNN61_20375 PF06508 Queuosine biosynthesis protein QueC JNN61_20380 PF12793 Sugar transport-related sRNA regulator N-term JNN61_20380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_20390 PF01797 Transposase IS200 like JNN61_20395 PF13404 AsnC-type helix-turn-helix domain JNN61_20395 PF01037 Lrp/AsnC ligand binding domain JNN61_20400 PF00005 ABC transporter JNN61_20400 PF00664 ABC transporter transmembrane region JNN61_20405 PF00005 ABC transporter JNN61_20405 PF00664 ABC transporter transmembrane region JNN61_20410 PF00543 Nitrogen regulatory protein P-II JNN61_20415 PF00909 Ammonium Transporter Family JNN61_20425 PF09619 Type III secretion system lipoprotein chaperone (YscW) JNN61_20430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JNN61_20440 PF07237 Protein of unknown function (DUF1428) JNN61_20445 PF00563 EAL domain JNN61_20445 PF12792 CSS motif domain associated with EAL JNN61_20450 PF10777 Inner membrane protein YlaC JNN61_20455 PF14602 Hexapeptide repeat of succinyl-transferase JNN61_20455 PF12464 Maltose acetyltransferase JNN61_20460 PF05321 Haemolysin expression modulating protein JNN61_20465 PF10757 Biofilm formation regulator YbaJ JNN61_20470 PF00873 AcrB/AcrD/AcrF family JNN61_20475 PF00529 HlyD membrane-fusion protein of T1SS JNN61_20475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_20480 PF00440 Bacterial regulatory proteins, tetR family JNN61_20480 PF08361 MAATS-type transcriptional repressor, C-terminal region JNN61_20485 PF12795 Mechanosensitive ion channel porin domain JNN61_20485 PF00924 Mechanosensitive ion channel JNN61_20485 PF12794 Mechanosensitive ion channel inner membrane domain 1 JNN61_20490 PF10689 Protein of unknown function (DUF2496) JNN61_20495 PF07445 Primosomal replication protein priC JNN61_20500 PF04304 Protein of unknown function (DUF454) JNN61_20505 PF00156 Phosphoribosyl transferase domain JNN61_20510 PF12170 DNA polymerase III tau subunit V interacting with alpha JNN61_20510 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JNN61_20510 PF12169 DNA polymerase III subunits gamma and tau domain III JNN61_20515 PF02575 YbaB/EbfC DNA-binding family JNN61_20520 PF13662 Toprim domain JNN61_20520 PF02132 RecR protein JNN61_20525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_20525 PF00183 Hsp90 protein JNN61_20530 PF05191 Adenylate kinase, active site lid JNN61_20535 PF00762 Ferrochelatase JNN61_20540 PF07859 alpha/beta hydrolase fold JNN61_20545 PF00294 pfkB family carbohydrate kinase JNN61_20550 PF00999 Sodium/hydrogen exchanger family JNN61_20550 PF02254 TrkA-N domain JNN61_20555 PF07690 Major Facilitator Superfamily JNN61_20560 PF00149 Calcineurin-like phosphoesterase JNN61_20560 PF02872 5'-nucleotidase, C-terminal domain JNN61_20565 PF04073 Aminoacyl-tRNA editing domain JNN61_20570 PF01963 TraB family JNN61_20575 PF00403 Heavy-metal-associated domain JNN61_20580 PF04960 Glutaminase JNN61_20585 PF13520 Amino acid permease JNN61_20600 PF00664 ABC transporter transmembrane region JNN61_20600 PF03412 Peptidase C39 family JNN61_20600 PF00005 ABC transporter JNN61_20605 PF00529 HlyD membrane-fusion protein of T1SS JNN61_20610 PF13411 MerR HTH family regulatory protein JNN61_20630 PF01957 NfeD-like C-terminal, partner-binding JNN61_20635 PF16200 C-terminal region of band_7 JNN61_20635 PF01145 SPFH domain / Band 7 family JNN61_20640 PF00005 ABC transporter JNN61_20645 PF03649 Uncharacterised protein family (UPF0014) JNN61_20650 PF00085 Thioredoxin JNN61_20655 PF00106 short chain dehydrogenase JNN61_20660 PF13472 GDSL-like Lipase/Acylhydrolase family JNN61_20665 PF00005 ABC transporter JNN61_20680 PF03466 LysR substrate binding domain JNN61_20680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_20685 PF04115 Ureidoglycolate lyase JNN61_20690 PF01614 Bacterial transcriptional regulator JNN61_20690 PF09339 IclR helix-turn-helix domain JNN61_20695 PF00205 Thiamine pyrophosphate enzyme, central domain JNN61_20695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNN61_20695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_20700 PF01261 Xylose isomerase-like TIM barrel JNN61_20705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNN61_20705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNN61_20710 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JNN61_20715 PF01979 Amidohydrolase family JNN61_20720 PF00860 Permease family JNN61_20725 PF02595 Glycerate kinase family JNN61_20730 PF05899 Protein of unknown function (DUF861) JNN61_20730 PF07883 Cupin domain JNN61_20735 PF01546 Peptidase family M20/M25/M40 JNN61_20740 PF02615 Malate/L-lactate dehydrogenase JNN61_20745 PF00549 CoA-ligase JNN61_20745 PF02629 CoA binding domain JNN61_20750 PF06545 Protein of unknown function (DUF1116) JNN61_20755 PF11392 Protein of unknown function (DUF2877) JNN61_20760 PF00696 Amino acid kinase family JNN61_20765 PF02222 ATP-grasp domain JNN61_20765 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JNN61_20770 PF00731 AIR carboxylase JNN61_20775 PF12850 Calcineurin-like phosphoesterase superfamily domain JNN61_20780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JNN61_20785 PF01406 tRNA synthetases class I (C) catalytic domain JNN61_20785 PF09190 DALR domain JNN61_20790 PF04307 LexA-binding, inner membrane-associated putative hydrolase JNN61_20800 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JNN61_20800 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JNN61_20805 PF00419 Fimbrial protein JNN61_20810 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_20810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_20815 PF00577 Outer membrane usher protein JNN61_20815 PF13954 PapC N-terminal domain JNN61_20815 PF13953 PapC C-terminal domain JNN61_20820 PF00419 Fimbrial protein JNN61_20825 PF00419 Fimbrial protein JNN61_20830 PF00072 Response regulator receiver domain JNN61_20830 PF00196 Bacterial regulatory proteins, luxR family JNN61_20840 PF12833 Helix-turn-helix domain JNN61_20845 PF14488 Domain of unknown function (DUF4434) JNN61_20855 PF13632 Glycosyl transferase family group 2 JNN61_20855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JNN61_20860 PF13808 DDE_Tnp_1-associated JNN61_20860 PF01609 Transposase DDE domain JNN61_20885 PF05488 PAAR motif JNN61_20885 PF05593 RHS Repeat JNN61_20895 PF04717 Type VI secretion system, phage-baseplate injector JNN61_20900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_20900 PF00512 His Kinase A (phospho-acceptor) domain JNN61_20900 PF00672 HAMP domain JNN61_20905 PF00486 Transcriptional regulatory protein, C terminal JNN61_20905 PF00072 Response regulator receiver domain JNN61_20910 PF02321 Outer membrane efflux protein JNN61_20915 PF11604 Copper binding periplasmic protein CusF JNN61_20920 PF00529 HlyD membrane-fusion protein of T1SS JNN61_20920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_20925 PF00873 AcrB/AcrD/AcrF family JNN61_20930 PF00324 Amino acid permease JNN61_20935 PF00924 Mechanosensitive ion channel JNN61_20940 PF00881 Nitroreductase family JNN61_20945 PF04237 YjbR JNN61_20950 PF06643 Protein of unknown function (DUF1158) JNN61_20955 PF04107 Glutamate-cysteine ligase family 2(GCS2) JNN61_20960 PF01848 Hok/gef family JNN61_20965 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JNN61_20965 PF01648 4'-phosphopantetheinyl transferase superfamily JNN61_20970 PF07715 TonB-dependent Receptor Plug Domain JNN61_20970 PF00593 TonB dependent receptor JNN61_20975 PF11806 Domain of unknown function (DUF3327) JNN61_20975 PF00756 Putative esterase JNN61_20980 PF03621 MbtH-like protein JNN61_20985 PF00501 AMP-binding enzyme JNN61_20985 PF13193 AMP-binding enzyme C-terminal domain JNN61_20985 PF00550 Phosphopantetheine attachment site JNN61_20985 PF00975 Thioesterase domain JNN61_20985 PF00668 Condensation domain JNN61_20990 PF02706 Chain length determinant protein JNN61_20995 PF00005 ABC transporter JNN61_21000 PF01032 FecCD transport family JNN61_21005 PF01032 FecCD transport family JNN61_21010 PF05977 Transmembrane secretion effector JNN61_21015 PF01497 Periplasmic binding protein JNN61_21020 PF00425 chorismate binding enzyme JNN61_21025 PF13193 AMP-binding enzyme C-terminal domain JNN61_21025 PF00501 AMP-binding enzyme JNN61_21030 PF00550 Phosphopantetheine attachment site JNN61_21030 PF00857 Isochorismatase family JNN61_21040 PF03061 Thioesterase superfamily JNN61_21045 PF13722 5TM C-terminal transporter carbon starvation CstA JNN61_21045 PF02554 Carbon starvation protein CstA JNN61_21050 PF04328 Selenoprotein, putative JNN61_21055 PF00465 Iron-containing alcohol dehydrogenase JNN61_21060 PF00155 Aminotransferase class I and II JNN61_21065 PF02195 ParB-like nuclease domain JNN61_21070 PF01507 Phosphoadenosine phosphosulfate reductase family JNN61_21070 PF11922 Domain of unknown function (DUF3440) JNN61_21075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_21075 PF03466 LysR substrate binding domain JNN61_21080 PF13098 Thioredoxin-like domain JNN61_21085 PF00578 AhpC/TSA family JNN61_21085 PF10417 C-terminal domain of 1-Cys peroxiredoxin JNN61_21090 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_21090 PF13192 Thioredoxin domain JNN61_21095 PF00582 Universal stress protein family JNN61_21100 PF14760 Rnk N-terminus JNN61_21100 PF01272 Transcription elongation factor, GreA/GreB, C-term JNN61_21105 PF00445 Ribonuclease T2 family JNN61_21110 PF00939 Sodium:sulfate symporter transmembrane region JNN61_21115 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JNN61_21120 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JNN61_21125 PF04223 Citrate lyase, alpha subunit (CitF) JNN61_21130 PF03328 HpcH/HpaI aldolase/citrate lyase family JNN61_21135 PF06857 Malonate decarboxylase delta subunit (MdcD) JNN61_21140 PF08218 Citrate lyase ligase C-terminal domain JNN61_21145 PF00989 PAS fold JNN61_21145 PF17203 Single cache domain 3 JNN61_21145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JNN61_21145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_21150 PF00072 Response regulator receiver domain JNN61_21150 PF12431 Transcriptional regulator JNN61_21155 PF03606 C4-dicarboxylate anaerobic carrier JNN61_21160 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP JNN61_21165 PF00313 'Cold-shock' DNA-binding domain JNN61_21170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JNN61_21175 PF00795 Carbon-nitrogen hydrolase JNN61_21180 PF02416 mttA/Hcf106 family JNN61_21185 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JNN61_21185 PF04055 Radical SAM superfamily JNN61_21190 PF03466 LysR substrate binding domain JNN61_21190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_21195 PF03099 Biotin/lipoate A/B protein ligase family JNN61_21200 PF04359 Protein of unknown function (DUF493) JNN61_21205 PF07943 Penicillin-binding protein 5, C-terminal domain JNN61_21205 PF00768 D-alanyl-D-alanine carboxypeptidase JNN61_21210 PF03330 Lytic transglycolase JNN61_21210 PF05036 Sporulation related domain JNN61_21215 PF01098 Cell cycle protein JNN61_21220 PF03717 Penicillin-binding Protein dimerisation domain JNN61_21220 PF00905 Penicillin binding protein transpeptidase domain JNN61_21225 PF02590 Predicted SPOUT methyltransferase JNN61_21235 PF00300 Histidine phosphatase superfamily (branch 1) JNN61_21240 PF01467 Cytidylyltransferase-like JNN61_21245 PF06144 DNA polymerase III, delta subunit JNN61_21245 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JNN61_21250 PF04390 Lipopolysaccharide-assembly JNN61_21255 PF00133 tRNA synthetases class I (I, L, M and V) JNN61_21255 PF13603 Leucyl-tRNA synthetase, Domain 2 JNN61_21255 PF08264 Anticodon-binding domain of tRNA JNN61_21260 PF07295 Zinc-ribbon containing domain JNN61_21265 PF01156 Inosine-uridine preferring nucleoside hydrolase JNN61_21270 PF00005 ABC transporter JNN61_21275 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_21280 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_21285 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_21290 PF00795 Carbon-nitrogen hydrolase JNN61_21295 PF03471 Transporter associated domain JNN61_21295 PF00571 CBS domain JNN61_21300 PF02130 Uncharacterized protein family UPF0054 JNN61_21305 PF02562 PhoH-like protein JNN61_21310 PF04055 Radical SAM superfamily JNN61_21310 PF01938 TRAM domain JNN61_21310 PF00919 Uncharacterized protein family UPF0004 JNN61_21315 PF01494 FAD binding domain JNN61_21355 PF00733 Asparagine synthase JNN61_21355 PF13537 Glutamine amidotransferase domain JNN61_21360 PF13344 Haloacid dehalogenase-like hydrolase JNN61_21365 PF00480 ROK family JNN61_21365 PF01047 MarR family JNN61_21370 PF01979 Amidohydrolase family JNN61_21375 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JNN61_21380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JNN61_21380 PF00367 phosphotransferase system, EIIB JNN61_21380 PF02378 Phosphotransferase system, EIIC JNN61_21385 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JNN61_21385 PF00749 tRNA synthetases class I (E and Q), catalytic domain JNN61_21390 PF03573 outer membrane porin, OprD family JNN61_21395 PF13982 YbfN-like lipoprotein JNN61_21400 PF01475 Ferric uptake regulator family JNN61_21410 PF00258 Flavodoxin JNN61_21415 PF01402 Ribbon-helix-helix protein, copG family JNN61_21420 PF12697 Alpha/beta hydrolase family JNN61_21425 PF17206 SeqA protein N-terminal domain JNN61_21425 PF03925 SeqA protein C-terminal domain JNN61_21430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JNN61_21430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JNN61_21430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JNN61_21430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JNN61_21435 PF13520 Amino acid permease JNN61_21440 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JNN61_21440 PF01276 Orn/Lys/Arg decarboxylase, major domain JNN61_21440 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNN61_21450 PF00486 Transcriptional regulatory protein, C terminal JNN61_21450 PF00072 Response regulator receiver domain JNN61_21455 PF13493 Domain of unknown function (DUF4118) JNN61_21455 PF00512 His Kinase A (phospho-acceptor) domain JNN61_21455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_21455 PF13492 GAF domain JNN61_21455 PF02702 Osmosensitive K+ channel His kinase sensor domain JNN61_21460 PF02669 K+-transporting ATPase, c chain JNN61_21470 PF03814 Potassium-transporting ATPase A subunit JNN61_21475 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) JNN61_21480 PF10725 Protein of unknown function (DUF2517) JNN61_21485 PF05593 RHS Repeat JNN61_21485 PF03527 RHS protein JNN61_21495 PF15606 Bacterial toxin 34 JNN61_21495 PF03527 RHS protein JNN61_21495 PF05593 RHS Repeat JNN61_21505 PF08349 Protein of unknown function (DUF1722) JNN61_21510 PF03441 FAD binding domain of DNA photolyase JNN61_21510 PF00875 DNA photolyase JNN61_21515 PF00854 POT family JNN61_21520 PF01784 NIF3 (NGG1p interacting factor 3) JNN61_21525 PF02682 Carboxyltransferase domain, subdomain C and D JNN61_21530 PF02626 Carboxyltransferase domain, subdomain A and B JNN61_21535 PF03746 LamB/YcsF family JNN61_21540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JNN61_21540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JNN61_21540 PF06827 Zinc finger found in FPG and IleRS JNN61_21545 PF05145 Transition state regulatory protein AbrB JNN61_21550 PF00419 Fimbrial protein JNN61_21555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_21555 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_21560 PF00577 Outer membrane usher protein JNN61_21560 PF13953 PapC C-terminal domain JNN61_21560 PF13954 PapC N-terminal domain JNN61_21565 PF00419 Fimbrial protein JNN61_21570 PF00285 Citrate synthase, C-terminal domain JNN61_21580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JNN61_21585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JNN61_21590 PF00890 FAD binding domain JNN61_21590 PF02910 Fumarate reductase flavoprotein C-term JNN61_21595 PF13085 2Fe-2S iron-sulfur cluster binding domain JNN61_21600 PF00676 Dehydrogenase E1 component JNN61_21600 PF16078 2-oxoglutarate dehydrogenase N-terminus JNN61_21600 PF16870 2-oxoglutarate dehydrogenase C-terminal JNN61_21600 PF02779 Transketolase, pyrimidine binding domain JNN61_21605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNN61_21605 PF00364 Biotin-requiring enzyme JNN61_21605 PF02817 e3 binding domain JNN61_21610 PF08442 ATP-grasp domain JNN61_21610 PF00549 CoA-ligase JNN61_21615 PF02629 CoA binding domain JNN61_21615 PF00549 CoA-ligase JNN61_21620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_21620 PF03466 LysR substrate binding domain JNN61_21625 PF12557 Cob(I)alamin adenosyltransferase N terminal JNN61_21625 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JNN61_21630 PF05681 Fumarate hydratase (Fumerase) JNN61_21630 PF05683 Fumarase C-terminus JNN61_21635 PF00375 Sodium:dicarboxylate symporter family JNN61_21650 PF07476 Methylaspartate ammonia-lyase C-terminus JNN61_21650 PF05034 Methylaspartate ammonia-lyase N-terminus JNN61_21655 PF06368 Methylaspartate mutase E chain (MutE) JNN61_21660 PF13941 MutL protein JNN61_21665 PF02310 B12 binding domain JNN61_21680 PF01654 Cytochrome bd terminal oxidase subunit I JNN61_21685 PF02322 Cytochrome bd terminal oxidase subunit II JNN61_21690 PF08173 Membrane bound YbgT-like protein JNN61_21695 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JNN61_21700 PF03061 Thioesterase superfamily JNN61_21705 PF01618 MotA/TolQ/ExbB proton channel family JNN61_21710 PF02472 Biopolymer transport protein ExbD/TolR JNN61_21715 PF06519 TolA C-terminal JNN61_21720 PF04052 TolB amino-terminal domain JNN61_21720 PF07676 WD40-like Beta Propeller Repeat JNN61_21725 PF00691 OmpA family JNN61_21730 PF13174 Tetratricopeptide repeat JNN61_21730 PF16331 TolA binding protein trimerisation JNN61_21770 PF02445 Quinolinate synthetase A protein JNN61_21775 PF04973 Nicotinamide mononucleotide transporter JNN61_21780 PF01545 Cation efflux family JNN61_21785 PF13985 YbgS-like protein JNN61_21790 PF00793 DAHP synthetase I family JNN61_21795 PF00300 Histidine phosphatase superfamily (branch 1) JNN61_21800 PF01263 Aldose 1-epimerase JNN61_21805 PF00288 GHMP kinases N terminal domain JNN61_21805 PF08544 GHMP kinases C terminal JNN61_21805 PF10509 Galactokinase galactose-binding signature JNN61_21810 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JNN61_21810 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JNN61_21815 PF16363 GDP-mannose 4,6 dehydratase JNN61_21820 PF00005 ABC transporter JNN61_21825 PF03459 TOBE domain JNN61_21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_21830 PF10766 Multidrug efflux pump-associated protein AcrZ JNN61_21840 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_21845 PF00005 ABC transporter JNN61_21845 PF03459 TOBE domain JNN61_21855 PF10282 Lactonase, 7-bladed beta-propeller JNN61_21860 PF03466 LysR substrate binding domain JNN61_21860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_21865 PF04303 PrpF protein JNN61_21870 PF00939 Sodium:sulfate symporter transmembrane region JNN61_21875 PF00330 Aconitase family (aconitate hydratase) JNN61_21875 PF00694 Aconitase C-terminal domain JNN61_21880 PF01095 Pectinesterase JNN61_21885 PF01161 Phosphatidylethanolamine-binding protein JNN61_21890 PF00202 Aminotransferase class-III JNN61_21895 PF06968 Biotin and Thiamin Synthesis associated domain JNN61_21895 PF04055 Radical SAM superfamily JNN61_21900 PF00155 Aminotransferase class I and II JNN61_21905 PF08241 Methyltransferase domain JNN61_21915 PF12344 Ultra-violet resistance protein B JNN61_21915 PF02151 UvrB/uvrC motif JNN61_21915 PF17757 UvrB interaction domain JNN61_21915 PF00271 Helicase conserved C-terminal domain JNN61_21915 PF04851 Type III restriction enzyme, res subunit JNN61_21920 PF01933 Uncharacterised protein family UPF0052 JNN61_21925 PF06463 Molybdenum Cofactor Synthesis C JNN61_21925 PF04055 Radical SAM superfamily JNN61_21930 PF00994 Probable molybdopterin binding domain JNN61_21935 PF01967 MoaC family JNN61_21940 PF02597 ThiS family JNN61_21945 PF02391 MoaE protein JNN61_21950 PF01027 Inhibitor of apoptosis-promoting Bax1 JNN61_21955 PF01027 Inhibitor of apoptosis-promoting Bax1 JNN61_21960 PF03706 Lysylphosphatidylglycerol synthase TM region JNN61_21965 PF13091 PLD-like domain JNN61_21970 PF03372 Endonuclease/Exonuclease/phosphatase family JNN61_21975 PF11076 Putative inner membrane protein YbhQ JNN61_21990 PF00005 ABC transporter JNN61_21995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_22000 PF00440 Bacterial regulatory proteins, tetR family JNN61_22000 PF09209 Tetracyclin repressor-like, C-terminal domain JNN61_22005 PF00271 Helicase conserved C-terminal domain JNN61_22005 PF00270 DEAD/DEAH box helicase JNN61_22020 PF00270 DEAD/DEAH box helicase JNN61_22020 PF06733 DEAD_2 JNN61_22020 PF13307 Helicase C-terminal domain JNN61_22025 PF02885 Glycosyl transferase family, helical bundle domain JNN61_22030 PF02615 Malate/L-lactate dehydrogenase JNN61_22035 PF07338 Protein of unknown function (DUF1471) JNN61_22040 PF01258 Prokaryotic dksA/traR C4-type zinc finger JNN61_22045 PF18331 PKHD-type hydroxylase C-terminal domain JNN61_22045 PF13640 2OG-Fe(II) oxygenase superfamily JNN61_22050 PF07715 TonB-dependent Receptor Plug Domain JNN61_22050 PF00593 TonB dependent receptor JNN61_22055 PF07338 Protein of unknown function (DUF1471) JNN61_22060 PF05971 RNA methyltransferase JNN61_22065 PF00924 Mechanosensitive ion channel JNN61_22070 PF00005 ABC transporter JNN61_22075 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22080 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_22085 PF00210 Ferritin-like domain JNN61_22090 PF00892 EamA-like transporter family JNN61_22100 PF13505 Outer membrane protein beta-barrel domain JNN61_22105 PF00884 Sulfatase JNN61_22115 PF01325 Iron dependent repressor, N-terminal DNA binding domain JNN61_22115 PF02742 Iron dependent repressor, metal binding and dimerisation domain JNN61_22120 PF03600 Citrate transporter JNN61_22125 PF03734 L,D-transpeptidase catalytic domain JNN61_22125 PF17969 L,D-transpeptidase C-terminal domain JNN61_22130 PF00005 ABC transporter JNN61_22130 PF12848 ABC transporter JNN61_22135 PF16338 Domain of unknown function (DUF4968) JNN61_22135 PF17137 Domain of unknown function (DUF5110) JNN61_22135 PF01055 Glycosyl hydrolases family 31 JNN61_22135 PF13802 Galactose mutarotase-like JNN61_22140 PF07690 Major Facilitator Superfamily JNN61_22145 PF00356 Bacterial regulatory proteins, lacI family JNN61_22150 PF07350 Protein of unknown function (DUF1479) JNN61_22160 PF02901 Pyruvate formate lyase-like JNN61_22160 PF01228 Glycine radical JNN61_22165 PF04055 Radical SAM superfamily JNN61_22170 PF00923 Transaldolase/Fructose-6-phosphate aldolase JNN61_22175 PF00899 ThiF family JNN61_22180 PF03453 MoeA N-terminal region (domain I and II) JNN61_22180 PF03454 MoeA C-terminal region (domain IV) JNN61_22180 PF00994 Probable molybdopterin binding domain JNN61_22185 PF01112 Asparaginase JNN61_22190 PF00005 ABC transporter JNN61_22190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_22195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_22200 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22205 PF12911 N-terminal TM domain of oligopeptide transport permease C JNN61_22205 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22210 PF17153 Periplasmic sensor domain, extracellular JNN61_22210 PF00563 EAL domain JNN61_22215 PF17156 Gammaproteobacterial periplasmic sensor domain JNN61_22215 PF00990 Diguanylate cyclase, GGDEF domain JNN61_22230 PF00919 Uncharacterized protein family UPF0004 JNN61_22230 PF18693 TRAM domain JNN61_22230 PF04055 Radical SAM superfamily JNN61_22235 PF10799 Biofilm formation protein (YliH/bssR) JNN61_22240 PF07995 Glucose / Sorbosone dehydrogenase JNN61_22245 PF00043 Glutathione S-transferase, C-terminal domain JNN61_22245 PF13417 Glutathione S-transferase, N-terminal domain JNN61_22250 PF07943 Penicillin-binding protein 5, C-terminal domain JNN61_22250 PF00768 D-alanyl-D-alanine carboxypeptidase JNN61_22255 PF08220 DeoR-like helix-turn-helix domain JNN61_22255 PF00455 DeoR C terminal sensor domain JNN61_22260 PF01569 PAP2 superfamily JNN61_22265 PF07690 Major Facilitator Superfamily JNN61_22280 PF07690 Major Facilitator Superfamily JNN61_22285 PF00440 Bacterial regulatory proteins, tetR family JNN61_22290 PF06826 Predicted Permease Membrane Region JNN61_22290 PF02080 TrkA-C domain JNN61_22295 PF11045 Putative inner membrane protein of Enterobacteriaceae JNN61_22300 PF00462 Glutaredoxin JNN61_22305 PF07214 Protein of unknown function (DUF1418) JNN61_22315 PF08443 RimK-like ATP-grasp domain JNN61_22315 PF18030 RimK PreATP-grasp domain JNN61_22320 PF10722 Putative bacterial sensory transduction regulator JNN61_22325 PF13416 Bacterial extracellular solute-binding protein JNN61_22330 PF08402 TOBE domain JNN61_22330 PF00005 ABC transporter JNN61_22335 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22340 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22345 PF10767 Protein of unknown function (DUF2593) JNN61_22350 PF05958 tRNA (Uracil-5-)-methyltransferase JNN61_22355 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_22360 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22365 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22370 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNN61_22375 PF00005 ABC transporter JNN61_22380 PF12883 Protein of unknown function (DUF3828) JNN61_22390 PF01906 Putative heavy-metal-binding JNN61_22395 PF01510 N-acetylmuramoyl-L-alanine amidase JNN61_22400 PF01370 NAD dependent epimerase/dehydratase family JNN61_22405 PF13460 NAD(P)H-binding JNN61_22405 PF11066 Protein of unknown function (DUF2867) JNN61_22410 PF01212 Beta-eliminating lyase JNN61_22415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNN61_22415 PF00205 Thiamine pyrophosphate enzyme, central domain JNN61_22415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNN61_22420 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_22420 PF00970 Oxidoreductase FAD-binding domain JNN61_22420 PF00175 Oxidoreductase NAD-binding domain JNN61_22425 PF03063 Prismane/CO dehydrogenase family JNN61_22430 PF03956 Lysine exporter LysO JNN61_22435 PF00230 Major intrinsic protein JNN61_22440 PF11398 Protein of unknown function (DUF2813) JNN61_22445 PF04393 Protein of unknown function (DUF535) JNN61_22450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JNN61_22455 PF02687 FtsX-like permease family JNN61_22455 PF12704 MacB-like periplasmic core domain JNN61_22455 PF00005 ABC transporter JNN61_22460 PF00313 'Cold-shock' DNA-binding domain JNN61_22465 PF02617 ATP-dependent Clp protease adaptor protein ClpS JNN61_22470 PF17871 AAA lid domain JNN61_22470 PF07724 AAA domain (Cdc48 subfamily) JNN61_22470 PF10431 C-terminal, D2-small domain, of ClpB protein JNN61_22470 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_22470 PF02861 Clp amino terminal domain, pathogenicity island component JNN61_22485 PF01176 Translation initiation factor 1A / IF-1 JNN61_22490 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JNN61_22495 PF00664 ABC transporter transmembrane region JNN61_22495 PF00005 ABC transporter JNN61_22500 PF00664 ABC transporter transmembrane region JNN61_22500 PF00005 ABC transporter JNN61_22505 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_22510 PF01037 Lrp/AsnC ligand binding domain JNN61_22515 PF09397 Ftsk gamma domain JNN61_22515 PF01580 FtsK/SpoIIIE family JNN61_22515 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JNN61_22515 PF17854 FtsK alpha domain JNN61_22520 PF03548 Outer membrane lipoprotein carrier protein LolA JNN61_22525 PF16193 AAA C-terminal domain JNN61_22525 PF00004 ATPase family associated with various cellular activities (AAA) JNN61_22525 PF12002 MgsA AAA+ ATPase C terminal JNN61_22530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNN61_22530 PF02403 Seryl-tRNA synthetase N-terminal domain JNN61_22535 PF01568 Molydopterin dinucleotide binding domain JNN61_22535 PF00384 Molybdopterin oxidoreductase JNN61_22535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JNN61_22540 PF12800 4Fe-4S binding domain JNN61_22540 PF13247 4Fe-4S dicluster domain JNN61_22545 PF04976 DMSO reductase anchor subunit (DmsC) JNN61_22550 PF00857 Isochorismatase family JNN61_22555 PF07690 Major Facilitator Superfamily JNN61_22560 PF13520 Amino acid permease JNN61_22570 PF04055 Radical SAM superfamily JNN61_22575 PF01228 Glycine radical JNN61_22575 PF02901 Pyruvate formate lyase-like JNN61_22580 PF01226 Formate/nitrite transporter JNN61_22585 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JNN61_22585 PF18381 YcaO cyclodehydratase C-terminal domain JNN61_22590 PF04239 Protein of unknown function (DUF421) JNN61_22595 PF00266 Aminotransferase class-V JNN61_22600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNN61_22605 PF01435 Peptidase family M48 JNN61_22610 PF02224 Cytidylate kinase JNN61_22615 PF00575 S1 RNA binding domain JNN61_22620 PF00216 Bacterial DNA-binding protein JNN61_22625 PF00753 Metallo-beta-lactamase superfamily JNN61_22625 PF03772 Competence protein JNN61_22630 PF00005 ABC transporter JNN61_22630 PF00664 ABC transporter transmembrane region JNN61_22635 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JNN61_22640 PF06224 Winged helix DNA-binding domain JNN61_22645 PF03966 Trm112p-like protein JNN61_22650 PF02348 Cytidylyltransferase JNN61_22655 PF01636 Phosphotransferase enzyme family JNN61_22660 PF02698 DUF218 domain JNN61_22665 PF13847 Methyltransferase domain JNN61_22670 PF17192 MukF middle domain JNN61_22670 PF17193 MukF C-terminal domain JNN61_22670 PF03882 MukF winged-helix domain JNN61_22675 PF04288 MukE-like family JNN61_22680 PF04310 MukB N-terminal JNN61_22680 PF16330 MukB hinge domain JNN61_22685 PF01471 Putative peptidoglycan binding domain JNN61_22685 PF03734 L,D-transpeptidase catalytic domain JNN61_22690 PF05951 Bacterial protein of unknown function (DUF882) JNN61_22695 PF00753 Metallo-beta-lactamase superfamily JNN61_22700 PF00155 Aminotransferase class I and II JNN61_22705 PF00267 Gram-negative porin JNN61_22710 PF01336 OB-fold nucleic acid binding domain JNN61_22710 PF00152 tRNA synthetases class II (D, K and N) JNN61_22715 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JNN61_22715 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JNN61_22720 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JNN61_22720 PF01433 Peptidase family M1 domain JNN61_22720 PF11940 Domain of unknown function (DUF3458) Ig-like fold JNN61_22725 PF00005 ABC transporter JNN61_22730 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_22735 PF00296 Luciferase-like monooxygenase JNN61_22740 PF09084 NMT1/THI5 like JNN61_22745 PF03358 NADPH-dependent FMN reductase JNN61_22750 PF00419 Fimbrial protein JNN61_22755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_22755 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_22760 PF13954 PapC N-terminal domain JNN61_22760 PF13953 PapC C-terminal domain JNN61_22760 PF00577 Outer membrane usher protein JNN61_22765 PF00419 Fimbrial protein JNN61_22770 PF00419 Fimbrial protein JNN61_22775 PF00419 Fimbrial protein JNN61_22780 PF02753 Pili assembly chaperone PapD, C-terminal domain JNN61_22780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JNN61_22785 PF01180 Dihydroorotate dehydrogenase JNN61_22790 PF07126 Cell-division protein ZapC JNN61_22795 PF00111 2Fe-2S iron-sulfur cluster binding domain JNN61_22795 PF03476 MOSC N-terminal beta barrel domain JNN61_22795 PF03473 MOSC domain JNN61_22800 PF01170 Putative RNA methylase family UPF0020 JNN61_22800 PF02926 THUMP domain JNN61_22800 PF10672 S-adenosylmethionine-dependent methyltransferase JNN61_22805 PF16326 ABC transporter C-terminal domain JNN61_22805 PF00005 ABC transporter JNN61_22805 PF12848 ABC transporter JNN61_22810 PF04403 Paraquat-inducible protein A JNN61_22815 PF02470 MlaD protein JNN61_22820 PF03886 ABC-type transport auxiliary lipoprotein component JNN61_22825 PF04957 Ribosome modulation factor JNN61_22830 PF07977 FabA-like domain JNN61_22835 PF05362 Lon protease (S16) C-terminal proteolytic domain JNN61_22835 PF13654 AAA domain JNN61_22840 PF17414 MatP C-terminal ribbon-helix-helix domain JNN61_22840 PF06303 MatP N-terminal domain JNN61_22845 PF01389 OmpA-like transmembrane domain JNN61_22845 PF00691 OmpA family JNN61_22850 PF03846 Cell division inhibitor SulA JNN61_22855 PF04994 TfoX C-terminal domain JNN61_22855 PF04993 TfoX N-terminal domain JNN61_22860 PF12805 FUSC-like inner membrane protein yccS JNN61_22865 PF03733 Inner membrane component domain JNN61_22870 PF13361 UvrD-like helicase C-terminal domain JNN61_22870 PF00580 UvrD/REP helicase N-terminal domain JNN61_22870 PF12462 DNA helicase IV / RNA helicase N terminal JNN61_22875 PF02142 MGS-like domain JNN61_22880 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JNN61_22885 PF13380 CoA binding domain JNN61_22890 PF08755 Hemimethylated DNA-binding protein YccV like JNN61_22895 PF17785 PUA-like domain JNN61_22895 PF10672 S-adenosylmethionine-dependent methyltransferase JNN61_22900 PF00708 Acylphosphatase JNN61_22905 PF04358 DsrC like protein JNN61_22910 PF01027 Inhibitor of apoptosis-promoting Bax1 JNN61_22920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JNN61_22920 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JNN61_22925 PF00374 Nickel-dependent hydrogenase JNN61_22930 PF01292 Prokaryotic cytochrome b561 JNN61_22935 PF01750 Hydrogenase maturation protease JNN61_22940 PF07449 Hydrogenase-1 expression protein HyaE JNN61_22945 PF04809 HupH hydrogenase expression protein, C-terminal conserved region JNN61_22950 PF01654 Cytochrome bd terminal oxidase subunit I JNN61_22955 PF02322 Cytochrome bd terminal oxidase subunit II JNN61_22960 PF08173 Membrane bound YbgT-like protein JNN61_22965 PF00328 Histidine phosphatase superfamily (branch 2) JNN61_22970 PF00313 'Cold-shock' DNA-binding domain JNN61_22975 PF00313 'Cold-shock' DNA-binding domain JNN61_22985 PF15939 Putative antitoxin of bacterial toxin-antitoxin system JNN61_22990 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system JNN61_22995 PF12801 4Fe-4S binding domain JNN61_23000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_23000 PF00512 His Kinase A (phospho-acceptor) domain JNN61_23000 PF00072 Response regulator receiver domain JNN61_23000 PF01627 Hpt domain JNN61_23000 PF00672 HAMP domain JNN61_23005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JNN61_23010 PF00486 Transcriptional regulatory protein, C terminal JNN61_23010 PF00072 Response regulator receiver domain JNN61_23015 PF03264 NapC/NirT cytochrome c family, N-terminal region JNN61_23020 PF01568 Molydopterin dinucleotide binding domain JNN61_23020 PF00384 Molybdopterin oxidoreductase JNN61_23020 PF18364 Molybdopterin oxidoreductase N-terminal domain JNN61_23025 PF02613 Nitrate reductase delta subunit JNN61_23035 PF00226 DnaJ domain JNN61_23035 PF01556 DnaJ C terminal domain JNN61_23045 PF00328 Histidine phosphatase superfamily (branch 2) JNN61_23050 PF13993 YccJ-like protein JNN61_23055 PF03358 NADPH-dependent FMN reductase JNN61_23060 PF10685 Stress-induced bacterial acidophilic repeat motif JNN61_23065 PF00860 Permease family JNN61_23070 PF01613 Flavin reductase like domain JNN61_23075 PF00881 Nitroreductase family JNN61_23080 PF12697 Alpha/beta hydrolase family JNN61_23085 PF01042 Endoribonuclease L-PSP JNN61_23090 PF00857 Isochorismatase family JNN61_23095 PF00296 Luciferase-like monooxygenase JNN61_23100 PF08362 YcdC-like protein, C-terminal region JNN61_23100 PF00440 Bacterial regulatory proteins, tetR family JNN61_23105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JNN61_23105 PF01619 Proline dehydrogenase JNN61_23105 PF14850 DNA-binding domain of Proline dehydrogenase JNN61_23105 PF00171 Aldehyde dehydrogenase family JNN61_23115 PF00474 Sodium:solute symporter family JNN61_23120 PF03239 Iron permease FTR1 family JNN61_23125 PF09375 Imelysin JNN61_23125 PF13473 Cupredoxin-like domain JNN61_23130 PF04261 Dyp-type peroxidase family JNN61_23135 PF02562 PhoH-like protein JNN61_23140 PF13994 PgaD-like protein JNN61_23145 PF00535 Glycosyl transferase family 2 JNN61_23150 PF14883 Hypothetical glycosyl hydrolase family 13 JNN61_23150 PF01522 Polysaccharide deacetylase JNN61_23160 PF17158 Membrane-associated sensor, integral membrane domain JNN61_23160 PF00990 Diguanylate cyclase, GGDEF domain JNN61_23165 PF13356 Arm DNA-binding domain JNN61_23165 PF00589 Phage integrase family JNN61_23190 PF13148 Protein of unknown function (DUF3987) JNN61_23215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNN61_23225 PF00155 Aminotransferase class I and II JNN61_23230 PF00367 phosphotransferase system, EIIB JNN61_23230 PF02378 Phosphotransferase system, EIIC JNN61_23235 PF01116 Fructose-bisphosphate aldolase class-II JNN61_23240 PF00455 DeoR C terminal sensor domain JNN61_23240 PF08220 DeoR-like helix-turn-helix domain JNN61_23260 PF00455 DeoR C terminal sensor domain JNN61_23260 PF08220 DeoR-like helix-turn-helix domain JNN61_23265 PF00294 pfkB family carbohydrate kinase JNN61_23270 PF07690 Major Facilitator Superfamily JNN61_23285 PF01695 IstB-like ATP binding protein JNN61_23290 PF00665 Integrase core domain JNN61_23290 PF02796 Helix-turn-helix domain of resolvase JNN61_23300 PF01797 Transposase IS200 like JNN61_23305 PF03466 LysR substrate binding domain JNN61_23305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNN61_23310 PF01177 Asp/Glu/Hydantoin racemase JNN61_23315 PF03605 Anaerobic c4-dicarboxylate membrane transporter JNN61_23330 PF13520 Amino acid permease JNN61_23335 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JNN61_23335 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNN61_23335 PF01276 Orn/Lys/Arg decarboxylase, major domain JNN61_23340 PF13520 Amino acid permease JNN61_23355 PF10011 Predicted membrane protein (DUF2254) JNN61_23360 PF02028 BCCT, betaine/carnitine/choline family transporter JNN61_23365 PF13333 Integrase core domain JNN61_23365 PF13276 HTH-like domain JNN61_23365 PF00665 Integrase core domain JNN61_23370 PF03279 Bacterial lipid A biosynthesis acyltransferase JNN61_23375 PF04393 Protein of unknown function (DUF535) JNN61_23380 PF13439 Glycosyltransferase Family 4 JNN61_23380 PF00534 Glycosyl transferases group 1 JNN61_23385 PF01522 Polysaccharide deacetylase JNN61_23395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JNN61_23410 PF00005 ABC transporter JNN61_23415 PF01032 FecCD transport family JNN61_23420 PF01032 FecCD transport family JNN61_23425 PF01497 Periplasmic binding protein JNN61_23430 PF07715 TonB-dependent Receptor Plug Domain JNN61_23430 PF00593 TonB dependent receptor JNN61_23430 PF07660 Secretin and TonB N terminus short domain JNN61_23435 PF16220 Domain of unknown function (DUF4880) JNN61_23435 PF04773 FecR protein JNN61_23440 PF08281 Sigma-70, region 4 JNN61_23440 PF04542 Sigma-70 region 2 JNN61_23470 PF13005 zinc-finger binding domain of transposase IS66 JNN61_23470 PF13817 IS66 C-terminal element JNN61_23470 PF13007 Transposase C of IS166 homeodomain JNN61_23470 PF03050 Transposase IS66 family JNN61_23475 PF05717 IS66 Orf2 like protein JNN61_23500 PF05321 Haemolysin expression modulating protein JNN61_23530 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_23530 PF13018 Extended Signal Peptide of Type V secretion system JNN61_23530 PF03797 Autotransporter beta-domain JNN61_23545 PF06006 Bacterial protein of unknown function (DUF905) JNN61_23550 PF06067 Domain of unknown function (DUF932) JNN61_23555 PF03230 Antirestriction protein JNN61_23560 PF04002 RadC-like JAB domain JNN61_23565 PF06174 Protein of unknown function (DUF987) JNN61_23575 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JNN61_23580 PF06755 CbtA_toxin of type IV toxin-antitoxin system JNN61_23605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNN61_23610 PF02811 PHP domain JNN61_23615 PF02613 Nitrate reductase delta subunit JNN61_23620 PF06496 Protein of unknown function (DUF1097) JNN61_23625 PF03783 Curli production assembly/transport component CsgG JNN61_23630 PF10614 Type VIII secretion system (T8SS), CsgF protein JNN61_23635 PF10627 Curli assembly protein CsgE JNN61_23640 PF00196 Bacterial regulatory proteins, luxR family JNN61_23645 PF07012 Curlin associated repeat JNN61_23650 PF07012 Curlin associated repeat JNN61_23655 PF10610 Thin aggregative fimbriae synthesis protein JNN61_23665 PF01661 Macro domain JNN61_23670 PF13091 PLD-like domain JNN61_23675 PF01757 Acyltransferase family JNN61_23680 PF04349 Periplasmic glucan biosynthesis protein, MdoG JNN61_23685 PF00535 Glycosyl transferase family 2 JNN61_23690 PF07119 Protein of unknown function (DUF1375) JNN61_23695 PF13984 MsyB protein JNN61_23700 PF07690 Major Facilitator Superfamily JNN61_23705 PF03279 Bacterial lipid A biosynthesis acyltransferase JNN61_23710 PF00581 Rhodanese-like domain JNN61_23710 PF12368 Rhodanase C-terminal JNN61_23710 PF17773 UPF0176 acylphosphatase like domain JNN61_23715 PF04264 YceI-like domain JNN61_23720 PF01292 Prokaryotic cytochrome b561 JNN61_23725 PF10968 Protein of unknown function (DUF2770) JNN61_23730 PF01266 FAD dependent oxidoreductase JNN61_23735 PF13991 BssS protein family JNN61_23740 PF06183 DinI-like family JNN61_23745 PF01979 Amidohydrolase family JNN61_23750 PF07273 Protein of unknown function (DUF1439) JNN61_23755 PF04399 Glutaredoxin 2, C terminal domain JNN61_23755 PF13417 Glutathione S-transferase, N-terminal domain JNN61_23760 PF07690 Major Facilitator Superfamily JNN61_23765 PF13302 Acetyltransferase (GNAT) domain JNN61_23770 PF04337 Protein of unknown function, DUF480 JNN61_23775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNN61_23780 PF03023 Lipid II flippase MurJ JNN61_23785 PF05130 FlgN protein JNN61_23790 PF04316 Anti-sigma-28 factor, FlgM JNN61_23795 PF13144 Chaperone for flagella basal body P-ring formation JNN61_23800 PF00460 Flagella basal body rod protein JNN61_23805 PF00460 Flagella basal body rod protein JNN61_23805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNN61_23810 PF13860 FlgD Ig-like domain JNN61_23810 PF13861 FlgD Tudor-like domain JNN61_23810 PF03963 Flagellar hook capping protein - N-terminal region JNN61_23815 PF07559 Flagellar basal body protein FlaE JNN61_23815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNN61_23815 PF00460 Flagella basal body rod protein JNN61_23820 PF00460 Flagella basal body rod protein JNN61_23820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNN61_23825 PF00460 Flagella basal body rod protein JNN61_23825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNN61_23830 PF02107 Flagellar L-ring protein JNN61_23835 PF02119 Flagellar P-ring protein JNN61_23840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNN61_23840 PF10135 Rod binding protein JNN61_23845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNN61_23845 PF00460 Flagella basal body rod protein JNN61_23850 PF00669 Bacterial flagellin N-terminal helical region JNN61_23865 PF00575 S1 RNA binding domain JNN61_23865 PF10150 Ribonuclease E/G family JNN61_23865 PF12111 Polyribonucleotide phosphorylase C terminal JNN61_23870 PF01479 S4 domain JNN61_23870 PF00849 RNA pseudouridylate synthase JNN61_23875 PF02545 Maf-like protein JNN61_23880 PF02620 Large ribosomal RNA subunit accumulation protein YceD JNN61_23885 PF01783 Ribosomal L32p protein family JNN61_23890 PF02504 Fatty acid synthesis protein JNN61_23895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JNN61_23895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JNN61_23900 PF00698 Acyl transferase domain JNN61_23910 PF00550 Phosphopantetheine attachment site JNN61_23915 PF02801 Beta-ketoacyl synthase, C-terminal domain JNN61_23915 PF00109 Beta-ketoacyl synthase, N-terminal domain JNN61_23920 PF01063 Amino-transferase class IV JNN61_23925 PF02618 YceG-like family JNN61_23930 PF02223 Thymidylate kinase JNN61_23935 PF09115 DNA polymerase III, delta subunit, C terminal JNN61_23940 PF01026 TatD related DNase JNN61_23945 PF02378 Phosphotransferase system, EIIC JNN61_23945 PF00367 phosphotransferase system, EIIB JNN61_23955 PF01230 HIT domain JNN61_23960 PF07233 Protein of unknown function (DUF1425) JNN61_23965 PF13036 Peptidoglycan-synthase activator LpoB JNN61_23970 PF01636 Phosphotransferase enzyme family JNN61_23975 PF00933 Glycosyl hydrolase family 3 N terminal domain JNN61_23980 PF05728 Uncharacterised protein family (UPF0227) JNN61_23985 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNN61_23990 PF05433 Glycine zipper 2TM domain JNN61_23995 PF00440 Bacterial regulatory proteins, tetR family JNN61_24000 PF07338 Protein of unknown function (DUF1471) JNN61_24005 PF03734 L,D-transpeptidase catalytic domain JNN61_24005 PF01476 LysM domain JNN61_24005 PF17969 L,D-transpeptidase C-terminal domain JNN61_24010 PF02559 CarD-like/TRCF domain JNN61_24010 PF00270 DEAD/DEAH box helicase JNN61_24010 PF03461 TRCF domain JNN61_24010 PF17757 UvrB interaction domain JNN61_24010 PF00271 Helicase conserved C-terminal domain JNN61_24015 PF01757 Acyltransferase family JNN61_24020 PF02687 FtsX-like permease family JNN61_24020 PF12704 MacB-like periplasmic core domain JNN61_24025 PF00005 ABC transporter JNN61_24030 PF12704 MacB-like periplasmic core domain JNN61_24030 PF02687 FtsX-like permease family JNN61_24035 PF00480 ROK family JNN61_24040 PF02146 Sir2 family JNN61_24045 PF04536 TPM domain JNN61_24050 PF12158 Protein of unknown function (DUF3592) JNN61_24055 PF13416 Bacterial extracellular solute-binding protein JNN61_24060 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_24065 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_24070 PF08402 TOBE domain JNN61_24070 PF00005 ABC transporter JNN61_24075 PF07687 Peptidase dimerisation domain JNN61_24075 PF01546 Peptidase family M20/M25/M40 JNN61_24080 PF08007 Cupin superfamily protein JNN61_24085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_24085 PF08918 PhoQ Sensor JNN61_24090 PF00486 Transcriptional regulatory protein, C terminal JNN61_24090 PF00072 Response regulator receiver domain JNN61_24095 PF00206 Lyase JNN61_24095 PF08328 Adenylosuccinate lyase C-terminal JNN61_24100 PF04356 Protein of unknown function (DUF489) JNN61_24110 PF00293 NUDIX domain JNN61_24115 PF00849 RNA pseudouridylate synthase JNN61_24130 PF00180 Isocitrate/isopropylmalate dehydrogenase JNN61_24135 PF01797 Transposase IS200 like JNN61_24150 PF01797 Transposase IS200 like JNN61_24160 PF07166 Protein of unknown function (DUF1398) JNN61_24165 PF13411 MerR HTH family regulatory protein JNN61_24170 PF04940 Sensors of blue-light using FAD JNN61_24170 PF00563 EAL domain JNN61_24175 PF10798 Biofilm development protein YmgB/AriR JNN61_24185 PF10798 Biofilm development protein YmgB/AriR JNN61_24195 PF12792 CSS motif domain associated with EAL JNN61_24195 PF00563 EAL domain JNN61_24205 PF03797 Autotransporter beta-domain JNN61_24210 PF16456 YmgD protein JNN61_24215 PF13436 Glycine-zipper domain JNN61_24235 PF16168 Adhesin of bacterial autotransporter system, probable stalk JNN61_24235 PF03212 Pertactin JNN61_24235 PF03797 Autotransporter beta-domain JNN61_24240 PF03776 Septum formation topological specificity factor MinE JNN61_24245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JNN61_24250 PF05209 Septum formation inhibitor MinC, N-terminal domain JNN61_24250 PF03775 Septum formation inhibitor MinC, C-terminal domain JNN61_24255 PF05666 Fels-1 Prophage Protein-like JNN61_24260 PF04151 Bacterial pre-peptidase C-terminal domain JNN61_24265 PF05166 YcgL domain JNN61_24270 PF01557 Fumarylacetoacetate (FAA) hydrolase family JNN61_24275 PF03692 Putative zinc- or iron-chelating domain JNN61_24280 PF06109 Haemolysin E (HlyE) JNN61_24285 PF00717 Peptidase S24-like JNN61_24290 PF11799 impB/mucB/samB family C-terminal domain JNN61_24290 PF00817 impB/mucB/samB family JNN61_24290 PF13438 Domain of unknown function (DUF4113) JNN61_24290 PF11798 IMS family HHH motif JNN61_24295 PF02600 Disulfide bond formation protein DsbB JNN61_24300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JNN61_24305 PF07840 FadR C-terminal domain JNN61_24305 PF00392 Bacterial regulatory proteins, gntR family JNN61_24310 PF04293 SpoVR like protein JNN61_24315 PF01266 FAD dependent oxidoreductase JNN61_24320 PF00842 Alanine racemase, C-terminal domain JNN61_24320 PF01168 Alanine racemase, N-terminal domain JNN61_24335 PF03471 Transporter associated domain JNN61_24335 PF02080 TrkA-C domain JNN61_24335 PF00999 Sodium/hydrogen exchanger family JNN61_24340 PF17676 LD-carboxypeptidase C-terminal domain JNN61_24340 PF02016 LD-carboxypeptidase N-terminal domain JNN61_24345 PF01464 Transglycosylase SLT domain JNN61_24350 PF07238 PilZ domain JNN61_24350 PF07317 Flagellar regulator YcgR JNN61_24355 PF04226 Transglycosylase associated protein JNN61_24365 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JNN61_24365 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JNN61_24370 PF13649 Methyltransferase domain JNN61_24375 PF00005 ABC transporter JNN61_24380 PF01032 FecCD transport family JNN61_24385 PF01497 Periplasmic binding protein JNN61_24390 PF01204 Trehalase JNN61_24395 PF03610 PTS system fructose IIA component JNN61_24395 PF00381 PTS HPr component phosphorylation site JNN61_24395 PF05524 PEP-utilising enzyme, N-terminal JNN61_24395 PF00391 PEP-utilising enzyme, mobile domain JNN61_24400 PF02734 DAK2 domain JNN61_24405 PF02733 Dak1 domain JNN61_24410 PF02954 Bacterial regulatory protein, Fis family JNN61_24410 PF00989 PAS fold JNN61_24410 PF00158 Sigma-54 interaction domain JNN61_24415 PF03212 Pertactin JNN61_24415 PF03797 Autotransporter beta-domain JNN61_24420 PF06071 Protein of unknown function (DUF933) JNN61_24420 PF01926 50S ribosome-binding GTPase JNN61_24425 PF01195 Peptidyl-tRNA hydrolase JNN61_24430 PF10762 Protein of unknown function (DUF2583) JNN61_24435 PF01740 STAS domain JNN61_24435 PF00916 Sulfate permease family JNN61_24440 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JNN61_24440 PF14572 Phosphoribosyl synthetase-associated domain JNN61_24445 PF08544 GHMP kinases C terminal JNN61_24445 PF00288 GHMP kinases N terminal domain JNN61_24450 PF03550 Outer membrane lipoprotein LolB JNN61_24455 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JNN61_24455 PF01488 Shikimate / quinate 5-dehydrogenase JNN61_24455 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JNN61_24460 PF03462 PCRF domain JNN61_24460 PF00472 RF-1 domain JNN61_24465 PF13847 Methyltransferase domain JNN61_24465 PF17827 PrmC N-terminal domain JNN61_24470 PF04247 Invasion gene expression up-regulator, SirB JNN61_24475 PF13369 Transglutaminase-like superfamily JNN61_24480 PF00793 DAHP synthetase I family JNN61_24485 PF01797 Transposase IS200 like JNN61_24490 PF13940 Toxin Ldr, type I toxin-antitoxin system JNN61_24495 PF13940 Toxin Ldr, type I toxin-antitoxin system JNN61_24500 PF01699 Sodium/calcium exchanger protein JNN61_24505 PF06150 ChaB JNN61_24510 PF04752 ChaC-like protein JNN61_24515 PF02635 DsrE/DsrF-like family JNN61_24520 PF11924 Inverse autotransporter, beta-domain JNN61_24525 PF00072 Response regulator receiver domain JNN61_24525 PF00196 Bacterial regulatory proteins, luxR family JNN61_24530 PF07730 Histidine kinase JNN61_24530 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JNN61_24530 PF00672 HAMP domain JNN61_24530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNN61_24535 PF07690 Major Facilitator Superfamily JNN61_24540 PF14710 Respiratory nitrate reductase alpha N-terminal JNN61_24540 PF01568 Molydopterin dinucleotide binding domain JNN61_24540 PF00384 Molybdopterin oxidoreductase JNN61_24545 PF14711 Respiratory nitrate reductase beta C-terminal JNN61_24545 PF13247 4Fe-4S dicluster domain JNN61_24550 PF02613 Nitrate reductase delta subunit JNN61_24555 PF02665 Nitrate reductase gamma subunit JNN61_24585 PF01842 ACT domain JNN61_24585 PF00551 Formyl transferase JNN61_24590 PF02810 SEC-C motif JNN61_24595 PF01734 Patatin-like phospholipase JNN61_24600 PF00072 Response regulator receiver domain JNN61_24605 PF00483 Nucleotidyl transferase JNN61_24610 PF00816 H-NS histone family JNN61_24615 PF00265 Thymidine kinase JNN61_24620 PF00171 Aldehyde dehydrogenase family JNN61_24620 PF00465 Iron-containing alcohol dehydrogenase JNN61_24625 PF01914 MarC family integral membrane protein JNN61_24635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNN61_24640 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_24645 PF00528 Binding-protein-dependent transport system inner membrane component JNN61_24645 PF12911 N-terminal TM domain of oligopeptide transport permease C JNN61_24650 PF00005 ABC transporter JNN61_24650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_24655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNN61_24655 PF00005 ABC transporter JNN61_24660 PF04269 Protein of unknown function, DUF440 JNN61_24665 PF13091 PLD-like domain JNN61_24665 PF13396 Phospholipase_D-nuclease N-terminal JNN61_24675 PF02254 TrkA-N domain JNN61_24675 PF07885 Ion channel JNN61_24680 PF03795 YCII-related domain JNN61_24685 PF03544 Gram-negative bacterial TonB protein C-terminal JNN61_24690 PF03061 Thioesterase superfamily JNN61_24695 PF04279 Intracellular septation protein A JNN61_24710 PF03922 OmpW family JNN61_24715 PF00589 Phage integrase family JNN61_24715 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain JNN61_24730 PF07358 Protein of unknown function (DUF1482) JNN61_24735 PF05358 DicB protein JNN61_24740 PF09669 Phage regulatory protein Rha (Phage_pRha) JNN61_24740 PF10549 ORF11CD3 domain JNN61_24760 PF07151 Protein of unknown function (DUF1391) JNN61_24790 PF07789 Protein of unknown function (DUF1627) JNN61_24850 PF01848 Hok/gef family JNN61_24875 PF06147 Protein of unknown function (DUF968) JNN61_24880 PF05866 Endodeoxyribonuclease RusA JNN61_24885 PF03589 Antitermination protein JNN61_24895 PF01555 DNA methylase JNN61_24925 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase JNN61_24930 PF04971 Bacteriophage P21 holin S JNN61_24935 PF07041 Protein of unknown function (DUF1327) JNN61_24945 PF00959 Phage lysozyme JNN61_24965 PF13132 Domain of unknown function (DUF3950)