locus-tag class description HHJ45_00005 PF00308 Bacterial dnaA protein HHJ45_00005 PF08299 Bacterial dnaA protein helix-turn-helix HHJ45_00005 PF11638 DnaA N-terminal domain HHJ45_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HHJ45_00010 PF02767 DNA polymerase III beta subunit, central domain HHJ45_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HHJ45_00015 PF02463 RecF/RecN/SMC N terminal domain HHJ45_00020 PF00204 DNA gyrase B HHJ45_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HHJ45_00020 PF18053 DNA gyrase B subunit insert domain HHJ45_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_00020 PF01751 Toprim domain HHJ45_00030 PF06078 Bacterial protein of unknown function (DUF937) HHJ45_00045 PF00392 Bacterial regulatory proteins, gntR family HHJ45_00045 PF07729 FCD domain HHJ45_00050 PF05035 2-keto-3-deoxy-galactonokinase HHJ45_00055 PF01081 KDPG and KHG aldolase HHJ45_00060 PF13378 Enolase C-terminal domain-like HHJ45_00060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HHJ45_00065 PF07690 Major Facilitator Superfamily HHJ45_00070 PF01494 FAD binding domain HHJ45_00075 PF12566 Protein of unknown function (DUF3748) HHJ45_00075 PF07676 WD40-like Beta Propeller Repeat HHJ45_00080 PF07119 Protein of unknown function (DUF1375) HHJ45_00085 PF00011 Hsp20/alpha crystallin family HHJ45_00090 PF00011 Hsp20/alpha crystallin family HHJ45_00095 PF02080 TrkA-C domain HHJ45_00095 PF06826 Predicted Permease Membrane Region HHJ45_00100 PF07702 UTRA domain HHJ45_00100 PF00392 Bacterial regulatory proteins, gntR family HHJ45_00105 PF00367 phosphotransferase system, EIIB HHJ45_00105 PF02378 Phosphotransferase system, EIIC HHJ45_00110 PF02056 Family 4 glycosyl hydrolase HHJ45_00120 PF12833 Helix-turn-helix domain HHJ45_00120 PF02311 AraC-like ligand binding domain HHJ45_00125 PF00474 Sodium:solute symporter family HHJ45_00130 PF00884 Sulfatase HHJ45_00130 PF16347 Domain of unknown function (DUF4976) HHJ45_00140 PF02656 Domain of unknown function (DUF202) HHJ45_00145 PF02656 Domain of unknown function (DUF202) HHJ45_00155 PF07690 Major Facilitator Superfamily HHJ45_00160 PF13939 Toxin TisB, type I toxin-antitoxin system HHJ45_00165 PF08049 IlvB leader peptide HHJ45_00170 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ45_00170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_00170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ45_00175 PF01842 ACT domain HHJ45_00180 PF00196 Bacterial regulatory proteins, luxR family HHJ45_00180 PF00072 Response regulator receiver domain HHJ45_00185 PF05231 MASE1 HHJ45_00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_00185 PF07730 Histidine kinase HHJ45_00190 PF07690 Major Facilitator Superfamily HHJ45_00195 PF07690 Major Facilitator Superfamily HHJ45_00200 PF01979 Amidohydrolase family HHJ45_00200 PF13382 Adenine deaminase C-terminal domain HHJ45_00205 PF00860 Permease family HHJ45_00210 PF06711 Protein of unknown function (DUF1198) HHJ45_00215 PF07690 Major Facilitator Superfamily HHJ45_00225 PF03180 NLPA lipoprotein HHJ45_00230 PF00892 EamA-like transporter family HHJ45_00235 PF07690 Major Facilitator Superfamily HHJ45_00255 PF13802 Galactose mutarotase-like HHJ45_00255 PF01055 Glycosyl hydrolases family 31 HHJ45_00260 PF05170 AsmA family HHJ45_00265 PF00860 Permease family HHJ45_00270 PF03616 Sodium/glutamate symporter HHJ45_00280 PF17191 RecG wedge domain HHJ45_00280 PF00271 Helicase conserved C-terminal domain HHJ45_00280 PF00270 DEAD/DEAH box helicase HHJ45_00285 PF00588 SpoU rRNA Methylase family HHJ45_00285 PF12105 SpoU, rRNA methylase, C-terminal HHJ45_00290 PF02824 TGS domain HHJ45_00290 PF04607 Region found in RelA / SpoT proteins HHJ45_00290 PF13291 ACT domain HHJ45_00295 PF01192 RNA polymerase Rpb6 HHJ45_00300 PF00625 Guanylate kinase HHJ45_00305 PF01653 NAD-dependent DNA ligase adenylation domain HHJ45_00305 PF03120 NAD-dependent DNA ligase OB-fold domain HHJ45_00310 PF03458 UPF0126 domain HHJ45_00345 PF06069 PerC transcriptional activator HHJ45_00410 PF08340 Domain of unknown function (DUF1732) HHJ45_00410 PF03755 YicC-like family, N-terminal region HHJ45_00415 PF01138 3' exoribonuclease family, domain 1 HHJ45_00415 PF03725 3' exoribonuclease family, domain 2 HHJ45_00420 PF00156 Phosphoribosyl transferase domain HHJ45_00425 PF00440 Bacterial regulatory proteins, tetR family HHJ45_00430 PF00692 dUTPase HHJ45_00435 PF04127 DNA / pantothenate metabolism flavoprotein HHJ45_00435 PF02441 Flavoprotein HHJ45_00440 PF04002 RadC-like JAB domain HHJ45_00445 PF00830 Ribosomal L28 family HHJ45_00450 PF00471 Ribosomal protein L33 HHJ45_00455 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HHJ45_00455 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HHJ45_00455 PF06827 Zinc finger found in FPG and IleRS HHJ45_00460 PF01467 Cytidylyltransferase-like HHJ45_00465 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HHJ45_00470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HHJ45_00475 PF13439 Glycosyltransferase Family 4 HHJ45_00475 PF00534 Glycosyl transferases group 1 HHJ45_00510 PF04932 O-Antigen ligase HHJ45_00515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HHJ45_00520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HHJ45_00525 PF01370 NAD dependent epimerase/dehydratase family HHJ45_00530 PF00155 Aminotransferase class I and II HHJ45_00535 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_00535 PF00107 Zinc-binding dehydrogenase HHJ45_00540 PF00535 Glycosyl transferase family 2 HHJ45_00545 PF04748 Divergent polysaccharide deacetylase HHJ45_00550 PF01551 Peptidase family M23 HHJ45_00555 PF01676 Metalloenzyme superfamily HHJ45_00555 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HHJ45_00560 PF00581 Rhodanese-like domain HHJ45_00565 PF00462 Glutaredoxin HHJ45_00570 PF02556 Preprotein translocase subunit SecB HHJ45_00575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HHJ45_00575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HHJ45_00580 PF06426 Serine acetyltransferase, N-terminal HHJ45_00580 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_00585 PF00588 SpoU rRNA Methylase family HHJ45_00590 PF01070 FMN-dependent dehydrogenase HHJ45_00595 PF00392 Bacterial regulatory proteins, gntR family HHJ45_00595 PF07729 FCD domain HHJ45_00600 PF02652 L-lactate permease HHJ45_00605 PF13018 Extended Signal Peptide of Type V secretion system HHJ45_00605 PF03895 YadA-like membrane anchor domain HHJ45_00605 PF05662 Coiled stalk of trimeric autotransporter adhesin HHJ45_00605 PF05658 Head domain of trimeric autotransporter adhesin HHJ45_00615 PF10928 Protein of unknown function (DUF2810) HHJ45_00625 PF05068 Mannitol repressor HHJ45_00630 PF08125 Mannitol dehydrogenase C-terminal domain HHJ45_00630 PF01232 Mannitol dehydrogenase Rossmann domain HHJ45_00635 PF02378 Phosphotransferase system, EIIC HHJ45_00635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_00635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_00640 PF11742 Protein of unknown function (DUF3302) HHJ45_00645 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_00645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_00650 PF15596 Immunity protein 57 HHJ45_00660 PF03527 RHS protein HHJ45_00670 PF15631 NTF2 fold immunity protein HHJ45_00675 PF14220 Domain of unknown function (DUF4329) HHJ45_00675 PF03527 RHS protein HHJ45_00675 PF05593 RHS Repeat HHJ45_00680 PF00043 Glutathione S-transferase, C-terminal domain HHJ45_00680 PF13417 Glutathione S-transferase, N-terminal domain HHJ45_00685 PF03841 L-seryl-tRNA selenium transferase HHJ45_00685 PF12390 Selenocysteine synthase N terminal HHJ45_00690 PF09106 Elongation factor SelB, winged helix HHJ45_00690 PF03144 Elongation factor Tu domain 2 HHJ45_00690 PF09107 Elongation factor SelB, winged helix HHJ45_00690 PF00009 Elongation factor Tu GTP binding domain HHJ45_00695 PF00465 Iron-containing alcohol dehydrogenase HHJ45_00700 PF00171 Aldehyde dehydrogenase family HHJ45_00710 PF11742 Protein of unknown function (DUF3302) HHJ45_00715 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_00715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_00720 PF03466 LysR substrate binding domain HHJ45_00725 PF06629 MltA-interacting protein MipA HHJ45_00745 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ45_00750 PF01261 Xylose isomerase-like TIM barrel HHJ45_00755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HHJ45_00760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ45_00760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_00765 PF03480 Bacterial extracellular solute-binding protein, family 7 HHJ45_00770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HHJ45_00775 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HHJ45_00780 PF04074 YhcH/YjgK/YiaL HHJ45_00785 PF02615 Malate/L-lactate dehydrogenase HHJ45_00790 PF01614 Bacterial transcriptional regulator HHJ45_00790 PF09339 IclR helix-turn-helix domain HHJ45_00795 PF13247 4Fe-4S dicluster domain HHJ45_00800 PF00155 Aminotransferase class I and II HHJ45_00805 PF00128 Alpha amylase, catalytic domain HHJ45_00810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HHJ45_00815 PF12833 Helix-turn-helix domain HHJ45_00820 PF02653 Branched-chain amino acid transport system / permease component HHJ45_00825 PF00005 ABC transporter HHJ45_00830 PF13407 Periplasmic binding protein domain HHJ45_00840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ45_00840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_00845 PF05360 yiaA/B two helix domain HHJ45_00850 PF05360 yiaA/B two helix domain HHJ45_00855 PF01757 Acyltransferase family HHJ45_00860 PF13983 YsaB-like lipoprotein HHJ45_00865 PF02091 Glycyl-tRNA synthetase alpha subunit HHJ45_00870 PF05746 DALR anticodon binding domain HHJ45_00870 PF02092 Glycyl-tRNA synthetase beta subunit HHJ45_00875 PF01848 Hok/gef family HHJ45_00880 PF00313 'Cold-shock' DNA-binding domain HHJ45_00885 PF01381 Helix-turn-helix HHJ45_00890 PF11254 Protein of unknown function (DUF3053) HHJ45_00895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ45_00895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HHJ45_00900 PF00691 OmpA family HHJ45_00900 PF13488 Glycine zipper HHJ45_00905 PF00384 Molybdopterin oxidoreductase HHJ45_00905 PF18364 Molybdopterin oxidoreductase N-terminal domain HHJ45_00905 PF01568 Molydopterin dinucleotide binding domain HHJ45_00910 PF00583 Acetyltransferase (GNAT) family HHJ45_00915 PF03352 Methyladenine glycosylase HHJ45_00920 PF03797 Autotransporter beta-domain HHJ45_00925 PF07690 Major Facilitator Superfamily HHJ45_00930 PF08019 Phosphoethanolamine transferase EptA/EptB HHJ45_00930 PF00884 Sulfatase HHJ45_00955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_00960 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_00965 PF12911 N-terminal TM domain of oligopeptide transport permease C HHJ45_00965 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_00970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_00970 PF00005 ABC transporter HHJ45_00975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_00975 PF00005 ABC transporter HHJ45_00980 PF03222 Tryptophan/tyrosine permease family HHJ45_00985 PF13940 Toxin Ldr, type I toxin-antitoxin system HHJ45_00995 PF11120 Cellulose biosynthesis protein BcsF HHJ45_01000 PF10995 Cellulose biosynthesis GIL HHJ45_01005 PF10945 Cellulose biosynthesis protein BcsR HHJ45_01015 PF07238 PilZ domain HHJ45_01015 PF03552 Cellulose synthase HHJ45_01015 PF00535 Glycosyl transferase family 2 HHJ45_01020 PF03170 Bacterial cellulose synthase subunit HHJ45_01025 PF01270 Glycosyl hydrolases family 8 HHJ45_01030 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HHJ45_01035 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_01035 PF17154 Gammaproteobacterial periplasmic sensor domain HHJ45_01035 PF00672 HAMP domain HHJ45_01035 PF00563 EAL domain HHJ45_01040 PF00375 Sodium:dicarboxylate symporter family HHJ45_01045 PF00675 Insulinase (Peptidase family M16) HHJ45_01045 PF05193 Peptidase M16 inactive domain HHJ45_01050 PF00294 pfkB family carbohydrate kinase HHJ45_01055 PF00563 EAL domain HHJ45_01060 PF05170 AsmA family HHJ45_01065 PF00083 Sugar (and other) transporter HHJ45_01065 PF07690 Major Facilitator Superfamily HHJ45_01070 PF03631 Virulence factor BrkB HHJ45_01075 PF03466 LysR substrate binding domain HHJ45_01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_01080 PF00196 Bacterial regulatory proteins, luxR family HHJ45_01085 PF01204 Trehalase HHJ45_01090 PF14376 Haem-binding domain HHJ45_01090 PF03150 Di-haem cytochrome c peroxidase HHJ45_01090 PF00034 Cytochrome c HHJ45_01100 PF12833 Helix-turn-helix domain HHJ45_01105 PF12833 Helix-turn-helix domain HHJ45_01110 PF00873 AcrB/AcrD/AcrF family HHJ45_01115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_01115 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_01125 PF00196 Bacterial regulatory proteins, luxR family HHJ45_01130 PF03729 Short repeat of unknown function (DUF308) HHJ45_01135 PF06411 HdeA/HdeB family HHJ45_01140 PF06411 HdeA/HdeB family HHJ45_01145 PF02308 MgtC family HHJ45_01150 PF00196 Bacterial regulatory proteins, luxR family HHJ45_01155 PF03843 Outer membrane lipoprotein Slp family HHJ45_01175 PF03960 ArsC family HHJ45_01180 PF02040 Arsenical pump membrane protein HHJ45_01185 PF01022 Bacterial regulatory protein, arsR family HHJ45_01195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HHJ45_01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_01200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HHJ45_01205 PF01432 Peptidase family M3 HHJ45_01210 PF04445 Putative SAM-dependent methyltransferase HHJ45_01215 PF00854 POT family HHJ45_01220 PF00582 Universal stress protein family HHJ45_01225 PF10625 Universal stress protein B (UspB) HHJ45_01230 PF01384 Phosphate transporter family HHJ45_01240 PF10951 Protein of unknown function (DUF2776) HHJ45_01245 PF13258 Domain of unknown function (DUF4049) HHJ45_01250 PF13258 Domain of unknown function (DUF4049) HHJ45_01255 PF13258 Domain of unknown function (DUF4049) HHJ45_01270 PF13533 Biotin-lipoyl like HHJ45_01275 PF00005 ABC transporter HHJ45_01295 PF01402 Ribbon-helix-helix protein, copG family HHJ45_01295 PF08753 NikR C terminal nickel binding domain HHJ45_01300 PF00005 ABC transporter HHJ45_01305 PF00005 ABC transporter HHJ45_01310 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_01315 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_01320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_01325 PF01648 4'-phosphopantetheinyl transferase superfamily HHJ45_01330 PF01594 AI-2E family transporter HHJ45_01335 PF07690 Major Facilitator Superfamily HHJ45_01340 PF08786 DcrB HHJ45_01345 PF02592 Putative vitamin uptake transporter HHJ45_01350 PF01206 Sulfurtransferase TusA HHJ45_01355 PF00403 Heavy-metal-associated domain HHJ45_01360 PF07947 YhhN family HHJ45_01365 PF10694 Protein of unknown function (DUF2500) HHJ45_01370 PF06611 Protein of unknown function (DUF1145) HHJ45_01380 PF02881 SRP54-type protein, helical bundle domain HHJ45_01380 PF00448 SRP54-type protein, GTPase domain HHJ45_01385 PF00005 ABC transporter HHJ45_01390 PF02687 FtsX-like permease family HHJ45_01390 PF18075 FtsX extracellular domain HHJ45_01395 PF04542 Sigma-70 region 2 HHJ45_01395 PF04545 Sigma-70, region 4 HHJ45_01400 PF13458 Periplasmic binding protein HHJ45_01415 PF12568 Acetyltransferase (GNAT) domain, PanZ HHJ45_01420 PF13458 Periplasmic binding protein HHJ45_01425 PF02653 Branched-chain amino acid transport system / permease component HHJ45_01430 PF11862 Domain of unknown function (DUF3382) HHJ45_01430 PF02653 Branched-chain amino acid transport system / permease component HHJ45_01435 PF00005 ABC transporter HHJ45_01435 PF12399 Branched-chain amino acid ATP-binding cassette transporter HHJ45_01440 PF00005 ABC transporter HHJ45_01445 PF13416 Bacterial extracellular solute-binding protein HHJ45_01450 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_01455 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_01460 PF00005 ABC transporter HHJ45_01460 PF17912 MalK OB fold domain HHJ45_01465 PF03009 Glycerophosphoryl diester phosphodiesterase family HHJ45_01470 PF10956 Protein of unknown function (DUF2756) HHJ45_01480 PF15567 Immunity protein 35 HHJ45_01495 PF00583 Acetyltransferase (GNAT) family HHJ45_01500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ45_01500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ45_01505 PF02678 Pirin HHJ45_01505 PF17954 Quercetinase C-terminal cupin domain HHJ45_01510 PF00356 Bacterial regulatory proteins, lacI family HHJ45_01510 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ45_01515 PF01202 Shikimate kinase HHJ45_01520 PF02447 GntP family permease HHJ45_01525 PF01914 MarC family integral membrane protein HHJ45_01530 PF01118 Semialdehyde dehydrogenase, NAD binding domain HHJ45_01530 PF02774 Semialdehyde dehydrogenase, dimerisation domain HHJ45_01535 PF02806 Alpha amylase, C-terminal all-beta domain HHJ45_01535 PF00128 Alpha amylase, catalytic domain HHJ45_01535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HHJ45_01540 PF00128 Alpha amylase, catalytic domain HHJ45_01540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HHJ45_01540 PF18390 Glycogen debranching enzyme C-terminal domain HHJ45_01545 PF00483 Nucleotidyl transferase HHJ45_01550 PF08323 Starch synthase catalytic domain HHJ45_01550 PF00534 Glycosyl transferases group 1 HHJ45_01555 PF00343 Carbohydrate phosphorylase HHJ45_01580 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HHJ45_01580 PF01266 FAD dependent oxidoreductase HHJ45_01585 PF00581 Rhodanese-like domain HHJ45_01590 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HHJ45_01590 PF01694 Rhomboid family HHJ45_01595 PF00455 DeoR C terminal sensor domain HHJ45_01595 PF08220 DeoR-like helix-turn-helix domain HHJ45_01600 PF06956 Regulator of RNA terminal phosphate cyclase HHJ45_01600 PF00158 Sigma-54 interaction domain HHJ45_01605 PF01139 tRNA-splicing ligase RtcB HHJ45_01610 PF01137 RNA 3'-terminal phosphate cyclase HHJ45_01610 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain HHJ45_01615 PF00196 Bacterial regulatory proteins, luxR family HHJ45_01615 PF17874 MalT-like TPR region HHJ45_01620 PF00343 Carbohydrate phosphorylase HHJ45_01625 PF02446 4-alpha-glucanotransferase HHJ45_01630 PF02447 GntP family permease HHJ45_01635 PF01521 Iron-sulphur cluster biosynthesis HHJ45_01635 PF01106 NifU-like domain HHJ45_01640 PF00156 Phosphoribosyl transferase domain HHJ45_01645 PF00561 alpha/beta hydrolase fold HHJ45_01650 PF04754 Putative transposase, YhgA-like HHJ45_01655 PF09012 FeoC like transcriptional regulator HHJ45_01660 PF07664 Ferrous iron transport protein B C terminus HHJ45_01660 PF17910 FeoB cytosolic helical domain HHJ45_01660 PF02421 Ferrous iron transport protein B HHJ45_01660 PF07670 Nucleoside recognition HHJ45_01665 PF04023 FeoA domain HHJ45_01670 PF17674 HHH domain HHJ45_01670 PF00575 S1 RNA binding domain HHJ45_01670 PF16921 Tex protein YqgF-like domain HHJ45_01670 PF09371 Tex-like protein N-terminal domain HHJ45_01675 PF01272 Transcription elongation factor, GreA/GreB, C-term HHJ45_01675 PF03449 Transcription elongation factor, N-terminal HHJ45_01680 PF00486 Transcriptional regulatory protein, C terminal HHJ45_01680 PF00072 Response regulator receiver domain HHJ45_01685 PF00672 HAMP domain HHJ45_01685 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_01685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_01700 PF01293 Phosphoenolpyruvate carboxykinase HHJ45_01705 PF13687 Domain of unknown function (DUF4153) HHJ45_01710 PF01430 Hsp33 protein HHJ45_01715 PF01479 S4 domain HHJ45_01720 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_01725 PF07095 Intracellular growth attenuator protein IgaA HHJ45_01730 PF00293 NUDIX domain HHJ45_01735 PF00905 Penicillin binding protein transpeptidase domain HHJ45_01735 PF00912 Transglycosylase HHJ45_01735 PF17092 Penicillin-binding protein OB-like domain HHJ45_01745 PF05137 Fimbrial assembly protein (PilN) HHJ45_01755 PF10748 DNA utilization proteins HofP HHJ45_01760 PF03958 Bacterial type II/III secretion system short domain HHJ45_01760 PF00263 Bacterial type II and III secretion system protein HHJ45_01765 PF01202 Shikimate kinase HHJ45_01770 PF01761 3-dehydroquinate synthase HHJ45_01775 PF05036 Sporulation related domain HHJ45_01780 PF02086 D12 class N6 adenine-specific DNA methyltransferase HHJ45_01785 PF00834 Ribulose-phosphate 3 epimerase family HHJ45_01790 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_01795 PF00579 tRNA synthetases class I (W and Y) HHJ45_01800 PF14502 Helix-turn-helix domain HHJ45_01800 PF14503 YhfZ C-terminal domain HHJ45_01810 PF01168 Alanine racemase, N-terminal domain HHJ45_01815 PF01676 Metalloenzyme superfamily HHJ45_01820 PF02126 Phosphotriesterase family HHJ45_01825 PF10941 Protein of unknown function DUF2620 HHJ45_01830 PF10797 Protein of unknown function HHJ45_01835 PF00155 Aminotransferase class I and II HHJ45_01840 PF07702 UTRA domain HHJ45_01840 PF00392 Bacterial regulatory proteins, gntR family HHJ45_01845 PF00294 pfkB family carbohydrate kinase HHJ45_01850 PF01261 Xylose isomerase-like TIM barrel HHJ45_01855 PF01380 SIS domain HHJ45_01860 PF13520 Amino acid permease HHJ45_01865 PF13978 Protein of unknown function (DUF4223) HHJ45_01870 PF14824 Sirohaem biosynthesis protein central HHJ45_01870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HHJ45_01870 PF10414 Sirohaem synthase dimerisation region HHJ45_01875 PF01226 Formate/nitrite transporter HHJ45_01880 PF13806 Rieske-like [2Fe-2S] domain HHJ45_01885 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_01885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HHJ45_01885 PF18267 Rubredoxin NAD+ reductase C-terminal domain HHJ45_01885 PF04324 BFD-like [2Fe-2S] binding domain HHJ45_01885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HHJ45_01890 PF07690 Major Facilitator Superfamily HHJ45_01895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HHJ45_01900 PF10832 Protein of unknown function (DUF2559) HHJ45_01905 PF02661 Fic/DOC family HHJ45_01910 PF00117 Glutamine amidotransferase class-I HHJ45_01915 PF00202 Aminotransferase class-III HHJ45_01920 PF12805 FUSC-like inner membrane protein yccS HHJ45_01925 PF00027 Cyclic nucleotide-binding domain HHJ45_01925 PF13545 Crp-like helix-turn-helix domain HHJ45_01930 PF02566 OsmC-like protein HHJ45_01935 PF00485 Phosphoribulokinase / Uridine kinase family HHJ45_01940 PF06794 Uncharacterised protein family (UPF0270) HHJ45_01945 PF00561 alpha/beta hydrolase fold HHJ45_01950 PF12848 ABC transporter HHJ45_01950 PF00005 ABC transporter HHJ45_01955 PF02525 Flavodoxin-like fold HHJ45_01960 PF02254 TrkA-N domain HHJ45_01960 PF00999 Sodium/hydrogen exchanger family HHJ45_01965 PF09526 Probable metal-binding protein (DUF2387) HHJ45_01970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ45_01975 PF04102 SlyX HHJ45_01980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ45_01980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HHJ45_01985 PF08348 YheO-like PAS domain HHJ45_01985 PF13309 HTH domain HHJ45_01990 PF02635 DsrE/DsrF-like family HHJ45_01995 PF02635 DsrE/DsrF-like family HHJ45_02000 PF04077 DsrH like protein HHJ45_02005 PF00164 Ribosomal protein S12/S23 HHJ45_02010 PF00177 Ribosomal protein S7p/S5e HHJ45_02015 PF03764 Elongation factor G, domain IV HHJ45_02015 PF03144 Elongation factor Tu domain 2 HHJ45_02015 PF00679 Elongation factor G C-terminus HHJ45_02015 PF14492 Elongation Factor G, domain II HHJ45_02015 PF00009 Elongation factor Tu GTP binding domain HHJ45_02020 PF00009 Elongation factor Tu GTP binding domain HHJ45_02020 PF03144 Elongation factor Tu domain 2 HHJ45_02020 PF03143 Elongation factor Tu C-terminal domain HHJ45_02025 PF04324 BFD-like [2Fe-2S] binding domain HHJ45_02030 PF00210 Ferritin-like domain HHJ45_02035 PF01478 Type IV leader peptidase family HHJ45_02040 PF00338 Ribosomal protein S10p/S20e HHJ45_02045 PF00297 Ribosomal protein L3 HHJ45_02050 PF00573 Ribosomal protein L4/L1 family HHJ45_02055 PF00276 Ribosomal protein L23 HHJ45_02060 PF00181 Ribosomal Proteins L2, RNA binding domain HHJ45_02060 PF03947 Ribosomal Proteins L2, C-terminal domain HHJ45_02065 PF00203 Ribosomal protein S19 HHJ45_02070 PF00237 Ribosomal protein L22p/L17e HHJ45_02075 PF07650 KH domain HHJ45_02075 PF00189 Ribosomal protein S3, C-terminal domain HHJ45_02080 PF00252 Ribosomal protein L16p/L10e HHJ45_02085 PF00831 Ribosomal L29 protein HHJ45_02090 PF00366 Ribosomal protein S17 HHJ45_02095 PF00238 Ribosomal protein L14p/L23e HHJ45_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HHJ45_02100 PF00467 KOW motif HHJ45_02105 PF00281 Ribosomal protein L5 HHJ45_02105 PF00673 ribosomal L5P family C-terminus HHJ45_02110 PF00253 Ribosomal protein S14p/S29e HHJ45_02115 PF00410 Ribosomal protein S8 HHJ45_02120 PF00347 Ribosomal protein L6 HHJ45_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HHJ45_02130 PF03719 Ribosomal protein S5, C-terminal domain HHJ45_02130 PF00333 Ribosomal protein S5, N-terminal domain HHJ45_02135 PF00327 Ribosomal protein L30p/L7e HHJ45_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HHJ45_02145 PF00344 SecY translocase HHJ45_02150 PF00444 Ribosomal protein L36 HHJ45_02155 PF00416 Ribosomal protein S13/S18 HHJ45_02160 PF00411 Ribosomal protein S11 HHJ45_02165 PF01479 S4 domain HHJ45_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain HHJ45_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HHJ45_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain HHJ45_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HHJ45_02175 PF01196 Ribosomal protein L17 HHJ45_02180 PF09350 Domain of unknown function (DUF1992) HHJ45_02185 PF13411 MerR HTH family regulatory protein HHJ45_02190 PF03889 Alternative ribosome-rescue factor A HHJ45_02195 PF01741 Large-conductance mechanosensitive channel, MscL HHJ45_02200 PF02254 TrkA-N domain HHJ45_02200 PF02080 TrkA-C domain HHJ45_02205 PF01189 16S rRNA methyltransferase RsmB/F HHJ45_02205 PF01029 NusB family HHJ45_02210 PF00551 Formyl transferase HHJ45_02210 PF02911 Formyl transferase, C-terminal domain HHJ45_02215 PF01327 Polypeptide deformylase HHJ45_02220 PF02481 DNA recombination-mediator protein A HHJ45_02220 PF17782 DprA winged helix domain HHJ45_02225 PF04361 Protein of unknown function (DUF494) HHJ45_02230 PF01396 Topoisomerase DNA binding C4 zinc finger HHJ45_02235 PF01300 Telomere recombination HHJ45_02240 PF08501 Shikimate dehydrogenase substrate binding domain HHJ45_02240 PF01488 Shikimate / quinate 5-dehydrogenase HHJ45_02240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HHJ45_02245 PF07369 Protein of unknown function (DUF1488) HHJ45_02250 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_02290 PF00005 ABC transporter HHJ45_02295 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_02300 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_02305 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_02315 PF00873 AcrB/AcrD/AcrF family HHJ45_02320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_02320 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_02325 PF08361 MAATS-type transcriptional repressor, C-terminal region HHJ45_02325 PF00440 Bacterial regulatory proteins, tetR family HHJ45_02330 PF10831 Protein of unknown function (DUF2556) HHJ45_02335 PF01555 DNA methylase HHJ45_02340 PF02954 Bacterial regulatory protein, Fis family HHJ45_02345 PF01207 Dihydrouridine synthase (Dus) HHJ45_02355 PF00474 Sodium:solute symporter family HHJ45_02360 PF06196 Protein of unknown function (DUF997) HHJ45_02365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HHJ45_02365 PF00289 Biotin carboxylase, N-terminal domain HHJ45_02365 PF02785 Biotin carboxylase C-terminal domain HHJ45_02370 PF00364 Biotin-requiring enzyme HHJ45_02375 PF00107 Zinc-binding dehydrogenase HHJ45_02375 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_02380 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_02380 PF17157 Gammaproteobacterial periplasmic sensor domain HHJ45_02380 PF00563 EAL domain HHJ45_02390 PF04085 rod shape-determining protein MreC HHJ45_02395 PF04093 rod shape-determining protein MreD HHJ45_02400 PF02545 Maf-like protein HHJ45_02405 PF00575 S1 RNA binding domain HHJ45_02405 PF10150 Ribonuclease E/G family HHJ45_02410 PF13116 Protein of unknown function HHJ45_02410 PF13502 AsmA-like C-terminal region HHJ45_02415 PF01523 Putative modulator of DNA gyrase HHJ45_02420 PF03466 LysR substrate binding domain HHJ45_02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_02425 PF07869 Protein of unknown function (DUF1656) HHJ45_02430 PF13533 Biotin-lipoyl like HHJ45_02435 PF04632 Fusaric acid resistance protein family HHJ45_02440 PF01337 Barstar (barnase inhibitor) HHJ45_02445 PF07338 Protein of unknown function (DUF1471) HHJ45_02450 PF02863 Arginine repressor, C-terminal domain HHJ45_02450 PF01316 Arginine repressor, DNA binding domain HHJ45_02455 PF00056 lactate/malate dehydrogenase, NAD binding domain HHJ45_02455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HHJ45_02460 PF13180 PDZ domain HHJ45_02465 PF13180 PDZ domain HHJ45_02465 PF00595 PDZ domain HHJ45_02470 PF06295 Protein of unknown function (DUF1043) HHJ45_02475 PF03969 AFG1-like ATPase HHJ45_02480 PF00572 Ribosomal protein L13 HHJ45_02485 PF00380 Ribosomal protein S9/S16 HHJ45_02490 PF02798 Glutathione S-transferase, N-terminal domain HHJ45_02490 PF00043 Glutathione S-transferase, C-terminal domain HHJ45_02495 PF04386 Stringent starvation protein B HHJ45_02500 PF03606 C4-dicarboxylate anaerobic carrier HHJ45_02505 PF07729 FCD domain HHJ45_02505 PF00392 Bacterial regulatory proteins, gntR family HHJ45_02510 PF00701 Dihydrodipicolinate synthetase family HHJ45_02515 PF07690 Major Facilitator Superfamily HHJ45_02520 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HHJ45_02525 PF00480 ROK family HHJ45_02530 PF04074 YhcH/YjgK/YiaL HHJ45_02535 PF06250 YhcG PDDEXK nuclease domain HHJ45_02535 PF17761 DUF1016 N-terminal domain HHJ45_02540 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_02540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HHJ45_02545 PF04898 Glutamate synthase central domain HHJ45_02545 PF01493 GXGXG motif HHJ45_02545 PF00310 Glutamine amidotransferases class-II HHJ45_02545 PF01645 Conserved region in glutamate synthase HHJ45_02550 PF04055 Radical SAM superfamily HHJ45_02550 PF16199 Radical_SAM C-terminal domain HHJ45_02555 PF18415 Histidine kinase receptor ArcB trans-membrane domain HHJ45_02555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_02555 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_02555 PF00072 Response regulator receiver domain HHJ45_02555 PF01627 Hpt domain HHJ45_02555 PF00989 PAS fold HHJ45_02565 PF00912 Transglycosylase HHJ45_02570 PF10707 PhoP regulatory network protein YrbL HHJ45_02575 PF00381 PTS HPr component phosphorylation site HHJ45_02580 PF03668 P-loop ATPase protein family HHJ45_02585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_02590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HHJ45_02595 PF00309 Sigma-54 factor, Activator interacting domain (AID) HHJ45_02595 PF04552 Sigma-54, DNA binding domain HHJ45_02595 PF04963 Sigma-54 factor, core binding domain HHJ45_02600 PF00005 ABC transporter HHJ45_02600 PF12399 Branched-chain amino acid ATP-binding cassette transporter HHJ45_02605 PF03968 OstA-like protein HHJ45_02610 PF06835 Lipopolysaccharide-assembly, LptC-related HHJ45_02620 PF00571 CBS domain HHJ45_02620 PF01380 SIS domain HHJ45_02625 PF01699 Sodium/calcium exchanger protein HHJ45_02630 PF00005 ABC transporter HHJ45_02635 PF02405 Permease MlaE HHJ45_02640 PF02470 MlaD protein HHJ45_02645 PF05494 MlaC protein HHJ45_02650 PF13466 STAS domain HHJ45_02655 PF01722 BolA-like protein HHJ45_02660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HHJ45_02665 PF13693 Winged helix-turn-helix DNA-binding HHJ45_02670 PF00348 Polyprenyl synthetase HHJ45_02675 PF00829 Ribosomal prokaryotic L21 protein HHJ45_02680 PF01016 Ribosomal L27 protein HHJ45_02685 PF00892 EamA-like transporter family HHJ45_02690 PF01018 GTP1/OBG HHJ45_02690 PF01926 50S ribosome-binding GTPase HHJ45_02695 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HHJ45_02700 PF01272 Transcription elongation factor, GreA/GreB, C-term HHJ45_02700 PF03449 Transcription elongation factor, N-terminal HHJ45_02705 PF01985 CRS1 / YhbY (CRM) domain HHJ45_02710 PF01728 FtsJ-like methyltransferase HHJ45_02715 PF00004 ATPase family associated with various cellular activities (AAA) HHJ45_02715 PF17862 AAA+ lid domain HHJ45_02715 PF06480 FtsH Extracellular HHJ45_02715 PF01434 Peptidase family M41 HHJ45_02720 PF00809 Pterin binding enzyme HHJ45_02725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HHJ45_02725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HHJ45_02725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HHJ45_02725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HHJ45_02730 PF03840 Preprotein translocase SecG subunit HHJ45_02740 PF00884 Sulfatase HHJ45_02745 PF00764 Arginosuccinate synthase HHJ45_02755 PF17384 RimP C-terminal SH3 domain HHJ45_02755 PF02576 RimP N-terminal domain HHJ45_02760 PF08529 NusA N-terminal domain HHJ45_02760 PF00575 S1 RNA binding domain HHJ45_02760 PF13184 NusA-like KH domain HHJ45_02765 PF08364 Bacterial translation initiation factor IF-2 associated region HHJ45_02765 PF00009 Elongation factor Tu GTP binding domain HHJ45_02765 PF11987 Translation-initiation factor 2 HHJ45_02765 PF04760 Translation initiation factor IF-2, N-terminal region HHJ45_02770 PF02033 Ribosome-binding factor A HHJ45_02775 PF16198 tRNA pseudouridylate synthase B C-terminal domain HHJ45_02775 PF01509 TruB family pseudouridylate synthase (N terminal domain) HHJ45_02775 PF09157 Pseudouridine synthase II TruB, C-terminal HHJ45_02780 PF00312 Ribosomal protein S15 HHJ45_02785 PF00013 KH domain HHJ45_02785 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HHJ45_02785 PF01138 3' exoribonuclease family, domain 1 HHJ45_02785 PF00575 S1 RNA binding domain HHJ45_02785 PF03725 3' exoribonuclease family, domain 2 HHJ45_02790 PF13181 Tetratricopeptide repeat HHJ45_02790 PF07719 Tetratricopeptide repeat HHJ45_02800 PF00270 DEAD/DEAH box helicase HHJ45_02800 PF03880 DbpA RNA binding domain HHJ45_02800 PF00271 Helicase conserved C-terminal domain HHJ45_02800 PF12343 Cold shock protein DEAD box A HHJ45_02805 PF03222 Tryptophan/tyrosine permease family HHJ45_02815 PF00296 Luciferase-like monooxygenase HHJ45_02820 PF01136 Peptidase family U32 HHJ45_02825 PF01136 Peptidase family U32 HHJ45_02830 PF02036 SCP-2 sterol transfer family HHJ45_02835 PF13508 Acetyltransferase (GNAT) domain HHJ45_02840 PF01541 GIY-YIG catalytic domain HHJ45_02850 PF01965 DJ-1/PfpI family HHJ45_02855 PF13460 NAD(P)H-binding HHJ45_02860 PF03773 Predicted permease HHJ45_02865 PF04972 BON domain HHJ45_02870 PF13580 SIS domain HHJ45_02875 PF02021 Uncharacterised protein family UPF0102 HHJ45_02880 PF04348 LppC putative lipoprotein HHJ45_02885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HHJ45_02890 PF00419 Fimbrial protein HHJ45_02895 PF13954 PapC N-terminal domain HHJ45_02895 PF13953 PapC C-terminal domain HHJ45_02895 PF00577 Outer membrane usher protein HHJ45_02900 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_02900 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_02905 PF00419 Fimbrial protein HHJ45_02910 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HHJ45_02915 PF03613 PTS system mannose/fructose/sorbose family IID component HHJ45_02920 PF03609 PTS system sorbose-specific iic component HHJ45_02925 PF03830 PTS system sorbose subfamily IIB component HHJ45_02930 PF01116 Fructose-bisphosphate aldolase class-II HHJ45_02935 PF01380 SIS domain HHJ45_02940 PF01979 Amidohydrolase family HHJ45_02945 PF03610 PTS system fructose IIA component HHJ45_02950 PF03613 PTS system mannose/fructose/sorbose family IID component HHJ45_02955 PF03609 PTS system sorbose-specific iic component HHJ45_02960 PF03830 PTS system sorbose subfamily IIB component HHJ45_02965 PF08013 Tagatose 6 phosphate kinase HHJ45_02975 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system HHJ45_02980 PF15937 prlF antitoxin for toxin YhaV_toxin HHJ45_02985 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HHJ45_02985 PF08666 SAF domain HHJ45_02990 PF07690 Major Facilitator Superfamily HHJ45_02995 PF03328 HpcH/HpaI aldolase/citrate lyase family HHJ45_03000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HHJ45_03000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HHJ45_03005 PF02595 Glycerate kinase family HHJ45_03035 PF03466 LysR substrate binding domain HHJ45_03035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_03040 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_03045 PF03222 Tryptophan/tyrosine permease family HHJ45_03050 PF00871 Acetokinase family HHJ45_03055 PF02901 Pyruvate formate lyase-like HHJ45_03055 PF01228 Glycine radical HHJ45_03060 PF01042 Endoribonuclease L-PSP HHJ45_03065 PF03313 Serine dehydratase alpha chain HHJ45_03065 PF03315 Serine dehydratase beta chain HHJ45_03075 PF03313 Serine dehydratase alpha chain HHJ45_03085 PF17954 Quercetinase C-terminal cupin domain HHJ45_03085 PF02678 Pirin HHJ45_03090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_03090 PF03466 LysR substrate binding domain HHJ45_03095 PF05656 Protein of unknown function (DUF805) HHJ45_03100 PF05656 Protein of unknown function (DUF805) HHJ45_03105 PF13409 Glutathione S-transferase, N-terminal domain HHJ45_03110 PF07681 DoxX HHJ45_03115 PF13997 YqjK-like protein HHJ45_03120 PF07332 Putative Actinobacterial Holin-X, holin superfamily III HHJ45_03125 PF05957 Bacterial protein of unknown function (DUF883) HHJ45_03130 PF06476 Protein of unknown function (DUF1090) HHJ45_03135 PF13721 SecD export protein N-terminal TM region HHJ45_03140 PF09335 SNARE associated Golgi protein HHJ45_03145 PF00392 Bacterial regulatory proteins, gntR family HHJ45_03145 PF07729 FCD domain HHJ45_03155 PF04449 CS1 type fimbrial major subunit HHJ45_03160 PF16967 E-set like domain HHJ45_03160 PF15976 CS1-pili formation C-terminal HHJ45_03160 PF17271 TcfC Usher-like barrel domain HHJ45_03170 PF07690 Major Facilitator Superfamily HHJ45_03175 PF02614 Glucuronate isomerase HHJ45_03180 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HHJ45_03180 PF08666 SAF domain HHJ45_03185 PF10688 Bacterial inner membrane protein HHJ45_03190 PF00375 Sodium:dicarboxylate symporter family HHJ45_03200 PF03741 Integral membrane protein TerC family HHJ45_03205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ45_03210 PF02698 DUF218 domain HHJ45_03215 PF01863 Protein of unknown function DUF45 HHJ45_03220 PF05175 Methyltransferase small domain HHJ45_03230 PF01381 Helix-turn-helix HHJ45_03235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HHJ45_03235 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_03240 PF01204 Trehalase HHJ45_03250 PF13520 Amino acid permease HHJ45_03255 PF04074 YhcH/YjgK/YiaL HHJ45_03260 PF02929 Beta galactosidase small chain HHJ45_03260 PF16353 Domain of unknown function(DUF4981) HHJ45_03260 PF00703 Glycosyl hydrolases family 2 HHJ45_03260 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HHJ45_03260 PF02837 Glycosyl hydrolases family 2, sugar binding domain HHJ45_03265 PF00356 Bacterial regulatory proteins, lacI family HHJ45_03270 PF01588 Putative tRNA binding domain HHJ45_03275 PF00202 Aminotransferase class-III HHJ45_03280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HHJ45_03280 PF08447 PAS fold HHJ45_03285 PF03551 Transcriptional regulator PadR-like family HHJ45_03290 PF04954 Siderophore-interacting protein HHJ45_03290 PF08021 Siderophore-interacting FAD-binding domain HHJ45_03300 PF03167 Uracil DNA glycosylase superfamily HHJ45_03305 PF04546 Sigma-70, non-essential region HHJ45_03305 PF03979 Sigma-70 factor, region 1.1 HHJ45_03305 PF00140 Sigma-70 factor, region 1.2 HHJ45_03305 PF04542 Sigma-70 region 2 HHJ45_03305 PF04545 Sigma-70, region 4 HHJ45_03305 PF04539 Sigma-70 region 3 HHJ45_03310 PF10410 DnaB-helicase binding domain of primase HHJ45_03310 PF08275 DNA primase catalytic core, N-terminal domain HHJ45_03310 PF01807 CHC2 zinc finger HHJ45_03310 PF08278 DNA primase DnaG DnaB-binding HHJ45_03315 PF01165 Ribosomal protein S21 HHJ45_03320 PF00814 Glycoprotease family HHJ45_03325 PF00939 Sodium:sulfate symporter transmembrane region HHJ45_03330 PF05683 Fumarase C-terminus HHJ45_03335 PF05681 Fumarate hydratase (Fumerase) HHJ45_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_03340 PF03466 LysR substrate binding domain HHJ45_03345 PF02660 Glycerol-3-phosphate acyltransferase HHJ45_03350 PF02152 Dihydroneopterin aldolase HHJ45_03355 PF02673 Bacitracin resistance protein BacA HHJ45_03360 PF01966 HD domain HHJ45_03360 PF12627 Probable RNA and SrmB- binding site of polymerase A HHJ45_03360 PF01743 Poly A polymerase head domain HHJ45_03365 PF08239 Bacterial SH3 domain HHJ45_03370 PF01928 CYTH domain HHJ45_03375 PF03710 Glutamate-ammonia ligase adenylyltransferase HHJ45_03375 PF08335 GlnD PII-uridylyltransferase HHJ45_03380 PF01467 Cytidylyltransferase-like HHJ45_03380 PF00294 pfkB family carbohydrate kinase HHJ45_03395 PF01145 SPFH domain / Band 7 family HHJ45_03395 PF15975 Flotillin HHJ45_03400 PF07290 Protein of unknown function (DUF1449) HHJ45_03405 PF08971 Glycogen synthesis protein HHJ45_03420 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_03420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_03430 PF00577 Outer membrane usher protein HHJ45_03430 PF13954 PapC N-terminal domain HHJ45_03430 PF13953 PapC C-terminal domain HHJ45_03435 PF00577 Outer membrane usher protein HHJ45_03435 PF13953 PapC C-terminal domain HHJ45_03435 PF13954 PapC N-terminal domain HHJ45_03440 PF00577 Outer membrane usher protein HHJ45_03440 PF13954 PapC N-terminal domain HHJ45_03440 PF13953 PapC C-terminal domain HHJ45_03450 PF04380 Membrane fusogenic activity HHJ45_03455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HHJ45_03465 PF02535 ZIP Zinc transporter HHJ45_03470 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HHJ45_03475 PF03738 Glutathionylspermidine synthase preATP-grasp HHJ45_03480 PF06693 Protein of unknown function (DUF1190) HHJ45_03485 PF02321 Outer membrane efflux protein HHJ45_03490 PF00293 NUDIX domain HHJ45_03495 PF06853 Protein of unknown function (DUF1249) HHJ45_03500 PF00149 Calcineurin-like phosphoesterase HHJ45_03505 PF05728 Uncharacterised protein family (UPF0227) HHJ45_03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_03510 PF00986 DNA gyrase B subunit, carboxyl terminus HHJ45_03510 PF00204 DNA gyrase B HHJ45_03510 PF01751 Toprim domain HHJ45_03530 PF00294 pfkB family carbohydrate kinase HHJ45_03555 PF03992 Antibiotic biosynthesis monooxygenase HHJ45_03560 PF02525 Flavodoxin-like fold HHJ45_03565 PF10840 Protein of unknown function (DUF2645) HHJ45_03570 PF08521 Two-component sensor kinase N-terminal HHJ45_03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_03570 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_03575 PF00486 Transcriptional regulatory protein, C terminal HHJ45_03575 PF00072 Response regulator receiver domain HHJ45_03580 PF04076 Bacterial OB fold (BOF) protein HHJ45_03585 PF06445 GyrI-like small molecule binding domain HHJ45_03590 PF03989 DNA gyrase C-terminal domain, beta-propeller HHJ45_03590 PF00521 DNA gyrase/topoisomerase IV, subunit A HHJ45_03595 PF01553 Acyltransferase HHJ45_03600 PF07732 Multicopper oxidase HHJ45_03600 PF00394 Multicopper oxidase HHJ45_03600 PF07731 Multicopper oxidase HHJ45_03605 PF08497 Radical SAM N-terminal HHJ45_03605 PF11842 Domain of unknown function (DUF3362) HHJ45_03605 PF04055 Radical SAM superfamily HHJ45_03610 PF04728 Lipoprotein leucine-zipper HHJ45_03615 PF12883 Protein of unknown function (DUF3828) HHJ45_03620 PF00248 Aldo/keto reductase family HHJ45_03625 PF00465 Iron-containing alcohol dehydrogenase HHJ45_03630 PF06719 AraC-type transcriptional regulator N-terminus HHJ45_03630 PF12833 Helix-turn-helix domain HHJ45_03635 PF09335 SNARE associated Golgi protein HHJ45_03640 PF01053 Cys/Met metabolism PLP-dependent enzyme HHJ45_03645 PF01618 MotA/TolQ/ExbB proton channel family HHJ45_03650 PF02472 Biopolymer transport protein ExbD/TolR HHJ45_03660 PF03350 Uncharacterized protein family, UPF0114 HHJ45_03665 PF00248 Aldo/keto reductase family HHJ45_03670 PF01738 Dienelactone hydrolase family HHJ45_03675 PF11115 Protein of unknown function (DUF2623) HHJ45_03680 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HHJ45_03680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HHJ45_03685 PF13247 4Fe-4S dicluster domain HHJ45_03690 PF03916 Polysulphide reductase, NrfD HHJ45_03695 PF00374 Nickel-dependent hydrogenase HHJ45_03700 PF01750 Hydrogenase maturation protease HHJ45_03705 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE HHJ45_03710 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HHJ45_03715 PF01455 HupF/HypC family HHJ45_03725 PF02798 Glutathione S-transferase, N-terminal domain HHJ45_03730 PF03738 Glutathionylspermidine synthase preATP-grasp HHJ45_03730 PF05257 CHAP domain HHJ45_03735 PF01384 Phosphate transporter family HHJ45_03755 PF01943 Polysaccharide biosynthesis protein HHJ45_03765 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HHJ45_03770 PF03739 Lipopolysaccharide export system permease LptF/LptG HHJ45_03780 PF00155 Aminotransferase class I and II HHJ45_03785 PF00550 Phosphopantetheine attachment site HHJ45_03795 PF00501 AMP-binding enzyme HHJ45_03795 PF14535 AMP-binding enzyme C-terminal domain HHJ45_03805 PF00392 Bacterial regulatory proteins, gntR family HHJ45_03805 PF07729 FCD domain HHJ45_03810 PF01565 FAD binding domain HHJ45_03810 PF02913 FAD linked oxidases, C-terminal domain HHJ45_03815 PF01565 FAD binding domain HHJ45_03820 PF13183 4Fe-4S dicluster domain HHJ45_03820 PF02754 Cysteine-rich domain HHJ45_03825 PF03928 Haem-degrading HHJ45_03830 PF01274 Malate synthase HHJ45_03835 PF02652 L-lactate permease HHJ45_03840 PF13402 Peptidase M60, enhancin and enhancin-like HHJ45_03840 PF13322 Domain of unknown function (DUF4092) HHJ45_03840 PF17291 N-terminal domain of M60-like peptidases HHJ45_03845 PF01478 Type IV leader peptidase family HHJ45_03845 PF06750 Bacterial Peptidase A24 N-terminal domain HHJ45_03850 PF16549 Type II secretion system (T2SS) pilotin, S protein HHJ45_03855 PF11356 Type II secretion system protein C HHJ45_03860 PF00263 Bacterial type II and III secretion system protein HHJ45_03860 PF03958 Bacterial type II/III secretion system short domain HHJ45_03865 PF00437 Type II/IV secretion system protein HHJ45_03870 PF00482 Type II secretion system (T2SS), protein F HHJ45_03875 PF07963 Prokaryotic N-terminal methylation motif HHJ45_03875 PF08334 Type II secretion system (T2SS), protein G HHJ45_03880 PF07963 Prokaryotic N-terminal methylation motif HHJ45_03885 PF02501 Type II secretion system (T2SS), protein I HHJ45_03885 PF07963 Prokaryotic N-terminal methylation motif HHJ45_03890 PF11612 Type II secretion system (T2SS), protein J HHJ45_03890 PF07963 Prokaryotic N-terminal methylation motif HHJ45_03895 PF03934 Type II secretion system (T2SS), protein K HHJ45_03900 PF12693 GspL periplasmic domain HHJ45_03905 PF04612 Type II secretion system (T2SS), protein M HHJ45_03925 PF06755 CbtA_toxin of type IV toxin-antitoxin system HHJ45_03930 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HHJ45_03935 PF06174 Protein of unknown function (DUF987) HHJ45_03940 PF04002 RadC-like JAB domain HHJ45_03945 PF03230 Antirestriction protein HHJ45_03950 PF06067 Domain of unknown function (DUF932) HHJ45_03955 PF06006 Bacterial protein of unknown function (DUF905) HHJ45_03965 PF08220 DeoR-like helix-turn-helix domain HHJ45_03965 PF13280 WYL domain HHJ45_03970 PF01926 50S ribosome-binding GTPase HHJ45_04035 PF04754 Putative transposase, YhgA-like HHJ45_04060 PF05717 IS66 Orf2 like protein HHJ45_04070 PF01695 IstB-like ATP binding protein HHJ45_04075 PF00665 Integrase core domain HHJ45_04090 PF13978 Protein of unknown function (DUF4223) HHJ45_04095 PF12833 Helix-turn-helix domain HHJ45_04100 PF00582 Universal stress protein family HHJ45_04110 PF03050 Transposase IS66 family HHJ45_04110 PF13007 Transposase C of IS166 homeodomain HHJ45_04110 PF13005 zinc-finger binding domain of transposase IS66 HHJ45_04110 PF13817 IS66 C-terminal element HHJ45_04125 PF13187 4Fe-4S dicluster domain HHJ45_04125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HHJ45_04125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HHJ45_04130 PF00175 Oxidoreductase NAD-binding domain HHJ45_04130 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HHJ45_04135 PF17179 4Fe-4S dicluster domain HHJ45_04185 PF02195 ParB-like nuclease domain HHJ45_04205 PF00270 DEAD/DEAH box helicase HHJ45_04205 PF08494 DEAD/H associated HHJ45_04205 PF00271 Helicase conserved C-terminal domain HHJ45_04240 PF00589 Phage integrase family HHJ45_04240 PF13356 Arm DNA-binding domain HHJ45_04250 PF04474 Protein of unknown function (DUF554) HHJ45_04255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HHJ45_04255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HHJ45_04255 PF01276 Orn/Lys/Arg decarboxylase, major domain HHJ45_04260 PF03825 Nucleoside H+ symporter HHJ45_04265 PF01464 Transglycosylase SLT domain HHJ45_04265 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HHJ45_04270 PF04362 Bacterial Fe(2+) trafficking HHJ45_04275 PF10576 Iron-sulfur binding domain of endonuclease III HHJ45_04275 PF00633 Helix-hairpin-helix motif HHJ45_04275 PF00730 HhH-GPD superfamily base excision DNA repair protein HHJ45_04275 PF14815 NUDIX domain HHJ45_04280 PF02390 Putative methyltransferase HHJ45_04285 PF04320 Protein with unknown function (DUF469) HHJ45_04290 PF11101 Protein of unknown function (DUF2884) HHJ45_04295 PF00710 Asparaginase, N-terminal HHJ45_04295 PF17763 Glutaminase/Asparaginase C-terminal domain HHJ45_04300 PF06717 Protein of unknown function (DUF1202) HHJ45_04305 PF06969 HemN C-terminal domain HHJ45_04305 PF04055 Radical SAM superfamily HHJ45_04310 PF01725 Ham1 family HHJ45_04315 PF02594 Uncharacterised ACR, YggU family COG1872 HHJ45_04320 PF02325 YGGT family HHJ45_04325 PF01168 Alanine racemase, N-terminal domain HHJ45_04330 PF00437 Type II/IV secretion system protein HHJ45_04340 PF03652 Holliday junction resolvase HHJ45_04345 PF02622 Uncharacterized ACR, COG1678 HHJ45_04350 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HHJ45_04350 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HHJ45_04355 PF04452 RNA methyltransferase HHJ45_04360 PF04231 Endonuclease I HHJ45_04365 PF10263 SprT-like family HHJ45_04365 PF17283 SprT-like zinc ribbon domain HHJ45_04370 PF00083 Sugar (and other) transporter HHJ45_04375 PF02773 S-adenosylmethionine synthetase, C-terminal domain HHJ45_04375 PF02772 S-adenosylmethionine synthetase, central domain HHJ45_04375 PF00438 S-adenosylmethionine synthetase, N-terminal domain HHJ45_04380 PF17430 Uncharacterized YqgC-like HHJ45_04385 PF11036 Virulence promoting factor HHJ45_04390 PF17944 Arginine decarboxylase C-terminal helical extension HHJ45_04390 PF17810 Arginine decarboxylase helical bundle domain HHJ45_04390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HHJ45_04400 PF00491 Arginase family HHJ45_04405 PF01435 Peptidase family M48 HHJ45_04410 PF02780 Transketolase, C-terminal domain HHJ45_04410 PF00456 Transketolase, thiamine diphosphate binding domain HHJ45_04410 PF02779 Transketolase, pyrimidine binding domain HHJ45_04415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_04420 PF02378 Phosphotransferase system, EIIC HHJ45_04420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_04425 PF00107 Zinc-binding dehydrogenase HHJ45_04425 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_04430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HHJ45_04435 PF05068 Mannitol repressor HHJ45_04445 PF00005 ABC transporter HHJ45_04450 PF00005 ABC transporter HHJ45_04470 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HHJ45_04470 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HHJ45_04475 PF00162 Phosphoglycerate kinase HHJ45_04480 PF01116 Fructose-bisphosphate aldolase class-II HHJ45_04485 PF00924 Mechanosensitive ion channel HHJ45_04485 PF05552 Conserved TM helix HHJ45_04490 PF01810 LysE type translocator HHJ45_04495 PF04402 Protein of unknown function (DUF541) HHJ45_04500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_04500 PF03466 LysR substrate binding domain HHJ45_04505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HHJ45_04505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HHJ45_04510 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_04520 PF02310 B12 binding domain HHJ45_04520 PF01642 Methylmalonyl-CoA mutase HHJ45_04525 PF03466 LysR substrate binding domain HHJ45_04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_04530 PF03466 LysR substrate binding domain HHJ45_04535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HHJ45_04540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ45_04540 PF01842 ACT domain HHJ45_04540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HHJ45_04555 PF01812 5-formyltetrahydrofolate cyclo-ligase family HHJ45_04565 PF05164 Cell division protein ZapA HHJ45_04570 PF03695 Uncharacterised protein family (UPF0149) HHJ45_04575 PF00557 Metallopeptidase family M24 HHJ45_04575 PF05195 Aminopeptidase P, N-terminal domain HHJ45_04580 PF01494 FAD binding domain HHJ45_04585 PF01494 FAD binding domain HHJ45_04595 PF08669 Glycine cleavage T-protein C-terminal barrel domain HHJ45_04595 PF01571 Aminomethyltransferase folate-binding domain HHJ45_04600 PF01597 Glycine cleavage H-protein HHJ45_04605 PF02347 Glycine cleavage system P-protein HHJ45_04615 PF00232 Glycosyl hydrolase family 1 HHJ45_04625 PF03006 Haemolysin-III related HHJ45_04630 PF01571 Aminomethyltransferase folate-binding domain HHJ45_04635 PF03937 Flavinator of succinate dehydrogenase HHJ45_04640 PF07254 Membrane-bound toxin component of toxin-antitoxin system HHJ45_04645 PF00258 Flavodoxin HHJ45_04650 PF00589 Phage integrase family HHJ45_04650 PF02899 Phage integrase, N-terminal SAM-like domain HHJ45_04655 PF13098 Thioredoxin-like domain HHJ45_04655 PF10411 Disulfide bond isomerase protein N-terminus HHJ45_04660 PF01368 DHH family HHJ45_04660 PF02272 DHHA1 domain HHJ45_04660 PF17768 RecJ OB domain HHJ45_04670 PF01336 OB-fold nucleic acid binding domain HHJ45_04670 PF00152 tRNA synthetases class II (D, K and N) HHJ45_04675 PF00293 NUDIX domain HHJ45_04690 PF00860 Permease family HHJ45_04700 PF13247 4Fe-4S dicluster domain HHJ45_04705 PF00860 Permease family HHJ45_04710 PF01979 Amidohydrolase family HHJ45_04715 PF00860 Permease family HHJ45_04720 PF01799 [2Fe-2S] binding domain HHJ45_04720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HHJ45_04720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HHJ45_04725 PF00941 FAD binding domain in molybdopterin dehydrogenase HHJ45_04730 PF01979 Amidohydrolase family HHJ45_04735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HHJ45_04735 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_04740 PF12804 MobA-like NTP transferase domain HHJ45_04750 PF02625 XdhC and CoxI family HHJ45_04750 PF13478 XdhC Rossmann domain HHJ45_04755 PF00696 Amino acid kinase family HHJ45_04760 PF01979 Amidohydrolase family HHJ45_04765 PF07687 Peptidase dimerisation domain HHJ45_04765 PF01546 Peptidase family M20/M25/M40 HHJ45_04770 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_04775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HHJ45_04775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HHJ45_04785 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_04785 PF01799 [2Fe-2S] binding domain HHJ45_04790 PF00941 FAD binding domain in molybdopterin dehydrogenase HHJ45_04790 PF03450 CO dehydrogenase flavoprotein C-terminal domain HHJ45_04795 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HHJ45_04795 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HHJ45_04800 PF01476 LysM domain HHJ45_04800 PF01551 Peptidase family M23 HHJ45_04820 PF00813 FliP family HHJ45_04825 PF00813 FliP family HHJ45_04835 PF01311 Bacterial export proteins, family 1 HHJ45_04885 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) HHJ45_04890 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) HHJ45_04950 PF03222 Tryptophan/tyrosine permease family HHJ45_04955 PF00108 Thiolase, N-terminal domain HHJ45_04955 PF02803 Thiolase, C-terminal domain HHJ45_04960 PF04962 KduI/IolB family HHJ45_04970 PF00083 Sugar (and other) transporter HHJ45_04975 PF01177 Asp/Glu/Hydantoin racemase HHJ45_04980 PF03466 LysR substrate binding domain HHJ45_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_04985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HHJ45_04985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HHJ45_04990 PF00356 Bacterial regulatory proteins, lacI family HHJ45_04995 PF01553 Acyltransferase HHJ45_04995 PF00501 AMP-binding enzyme HHJ45_05000 PF07690 Major Facilitator Superfamily HHJ45_05005 PF00248 Aldo/keto reductase family HHJ45_05010 PF06004 Bacterial protein of unknown function (DUF903) HHJ45_05015 PF03741 Integral membrane protein TerC family HHJ45_05020 PF02976 DNA mismatch repair enzyme MutH HHJ45_05025 PF00293 NUDIX domain HHJ45_05030 PF01590 GAF domain HHJ45_05030 PF00391 PEP-utilising enzyme, mobile domain HHJ45_05030 PF02896 PEP-utilising enzyme, TIM barrel domain HHJ45_05030 PF05524 PEP-utilising enzyme, N-terminal HHJ45_05035 PF01790 Prolipoprotein diacylglyceryl transferase HHJ45_05040 PF00303 Thymidylate synthase HHJ45_05045 PF07963 Prokaryotic N-terminal methylation motif HHJ45_05050 PF07963 Prokaryotic N-terminal methylation motif HHJ45_05055 PF10713 Protein of unknown function (DUF2509) HHJ45_05060 PF12528 Type II secretion prepilin peptidase dependent protein C HHJ45_05060 PF07963 Prokaryotic N-terminal methylation motif HHJ45_05065 PF17946 RecC C-terminal domain HHJ45_05070 PF16187 Middle or third domain of peptidase_M16 HHJ45_05070 PF05193 Peptidase M16 inactive domain HHJ45_05070 PF00675 Insulinase (Peptidase family M16) HHJ45_05075 PF00580 UvrD/REP helicase N-terminal domain HHJ45_05075 PF13361 UvrD-like helicase C-terminal domain HHJ45_05075 PF12705 PD-(D/E)XK nuclease superfamily HHJ45_05080 PF13538 UvrD-like helicase C-terminal domain HHJ45_05085 PF00583 Acetyltransferase (GNAT) family HHJ45_05085 PF00696 Amino acid kinase family HHJ45_05090 PF01520 N-acetylmuramoyl-L-alanine amidase HHJ45_05090 PF11741 AMIN domain HHJ45_05105 PF03562 MltA specific insert domain HHJ45_05105 PF06725 3D domain HHJ45_05110 PF00899 ThiF family HHJ45_05115 PF02657 Fe-S metabolism associated domain HHJ45_05120 PF00266 Aminotransferase class-V HHJ45_05125 PF06004 Bacterial protein of unknown function (DUF903) HHJ45_05130 PF03466 LysR substrate binding domain HHJ45_05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_05135 PF04241 Protein of unknown function (DUF423) HHJ45_05140 PF18125 RlmM ferredoxin-like domain HHJ45_05140 PF01728 FtsJ-like methyltransferase HHJ45_05145 PF00455 DeoR C terminal sensor domain HHJ45_05145 PF08220 DeoR-like helix-turn-helix domain HHJ45_05150 PF05025 RbsD / FucU transport protein family HHJ45_05155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_05155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ45_05160 PF07882 L-fucose isomerase, second N-terminal domain HHJ45_05160 PF02952 L-fucose isomerase, C-terminal domain HHJ45_05160 PF07881 L-fucose isomerase, first N-terminal domain HHJ45_05165 PF07690 Major Facilitator Superfamily HHJ45_05170 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ45_05175 PF00465 Iron-containing alcohol dehydrogenase HHJ45_05180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HHJ45_05180 PF01367 5'-3' exonuclease, C-terminal SAM fold HHJ45_05185 PF03313 Serine dehydratase alpha chain HHJ45_05185 PF03315 Serine dehydratase beta chain HHJ45_05195 PF11892 Domain of unknown function (DUF3412) HHJ45_05195 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HHJ45_05195 PF03641 Possible lysine decarboxylase HHJ45_05200 PF14489 QueF-like protein HHJ45_05200 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HHJ45_05205 PF07348 Syd protein (SUKH-2) HHJ45_05210 PF04287 tRNA pseudouridine synthase C HHJ45_05215 PF00849 RNA pseudouridylate synthase HHJ45_05220 PF00258 Flavodoxin HHJ45_05225 PF07690 Major Facilitator Superfamily HHJ45_05230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HHJ45_05230 PF13378 Enolase C-terminal domain-like HHJ45_05235 PF13378 Enolase C-terminal domain-like HHJ45_05240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HHJ45_05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_05240 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_05240 PF01627 Hpt domain HHJ45_05240 PF00072 Response regulator receiver domain HHJ45_05240 PF00672 HAMP domain HHJ45_05245 PF05958 tRNA (Uracil-5-)-methyltransferase HHJ45_05245 PF01938 TRAM domain HHJ45_05250 PF02824 TGS domain HHJ45_05250 PF13291 ACT domain HHJ45_05250 PF04607 Region found in RelA / SpoT proteins HHJ45_05255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HHJ45_05260 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HHJ45_05265 PF03819 MazG nucleotide pyrophosphohydrolase domain HHJ45_05270 PF00117 Glutamine amidotransferase class-I HHJ45_05270 PF06418 CTP synthase N-terminus HHJ45_05275 PF03952 Enolase, N-terminal domain HHJ45_05275 PF00113 Enolase, C-terminal TIM barrel domain HHJ45_05285 PF04536 TPM domain HHJ45_05295 PF04055 Radical SAM superfamily HHJ45_05300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ45_05300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_05305 PF01242 6-pyruvoyl tetrahydropterin synthase HHJ45_05310 PF00258 Flavodoxin HHJ45_05310 PF00175 Oxidoreductase NAD-binding domain HHJ45_05310 PF00667 FAD binding domain HHJ45_05315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HHJ45_05315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HHJ45_05320 PF01507 Phosphoadenosine phosphosulfate reductase family HHJ45_05325 PF01848 Hok/gef family HHJ45_05330 PF00271 Helicase conserved C-terminal domain HHJ45_05330 PF18019 HD domain HHJ45_05330 PF00270 DEAD/DEAH box helicase HHJ45_05335 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) HHJ45_05345 PF09344 CT1975-like protein HHJ45_05350 PF09704 CRISPR-associated protein (Cas_Cas5) HHJ45_05360 PF01867 CRISPR associated protein Cas1 HHJ45_05365 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) HHJ45_05370 PF04389 Peptidase family M28 HHJ45_05375 PF01507 Phosphoadenosine phosphosulfate reductase family HHJ45_05380 PF00009 Elongation factor Tu GTP binding domain HHJ45_05390 PF12084 Protein of unknown function (DUF3561) HHJ45_05395 PF04977 Septum formation initiator HHJ45_05400 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HHJ45_05405 PF02542 YgbB family HHJ45_05410 PF01142 tRNA pseudouridine synthase D (TruD) HHJ45_05415 PF01975 Survival protein SurE HHJ45_05425 PF01476 LysM domain HHJ45_05425 PF01551 Peptidase family M23 HHJ45_05430 PF04545 Sigma-70, region 4 HHJ45_05430 PF04539 Sigma-70 region 3 HHJ45_05430 PF04542 Sigma-70 region 2 HHJ45_05430 PF00140 Sigma-70 factor, region 1.2 HHJ45_05435 PF01047 MarR family HHJ45_05440 PF02441 Flavoprotein HHJ45_05445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HHJ45_05455 PF02447 GntP family permease HHJ45_05460 PF01261 Xylose isomerase-like TIM barrel HHJ45_05465 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ45_05470 PF07005 Sugar-binding N-terminal domain HHJ45_05470 PF17042 Nucleotide-binding C-terminal domain HHJ45_05475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HHJ45_05475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HHJ45_05480 PF08220 DeoR-like helix-turn-helix domain HHJ45_05480 PF00455 DeoR C terminal sensor domain HHJ45_05485 PF00149 Calcineurin-like phosphoesterase HHJ45_05490 PF05192 MutS domain III HHJ45_05490 PF05190 MutS family domain IV HHJ45_05490 PF01624 MutS domain I HHJ45_05490 PF05188 MutS domain II HHJ45_05490 PF00488 MutS domain V HHJ45_05590 PF11756 Nitrous oxide-stimulated promoter HHJ45_05595 PF01590 GAF domain HHJ45_05595 PF00158 Sigma-54 interaction domain HHJ45_05600 PF02769 AIR synthase related protein, C-terminal domain HHJ45_05600 PF00586 AIR synthase related protein, N-terminal domain HHJ45_05605 PF01924 Hydrogenase formation hypA family HHJ45_05610 PF01455 HupF/HypC family HHJ45_05615 PF02492 CobW/HypB/UreG, nucleotide-binding domain HHJ45_05620 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HHJ45_05625 PF11046 Transcriptional repressor of hyc and hyp operons HHJ45_05630 PF13247 4Fe-4S dicluster domain HHJ45_05635 PF00361 Proton-conducting membrane transporter HHJ45_05640 PF00146 NADH dehydrogenase HHJ45_05645 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HHJ45_05645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HHJ45_05645 PF00374 Nickel-dependent hydrogenase HHJ45_05650 PF12838 4Fe-4S dicluster domain HHJ45_05655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HHJ45_05660 PF07450 Formate hydrogenlyase maturation protein HycH HHJ45_05665 PF01750 Hydrogenase maturation protease HHJ45_05670 PF00232 Glycosyl hydrolase family 1 HHJ45_05675 PF02378 Phosphotransferase system, EIIC HHJ45_05675 PF00367 phosphotransferase system, EIIB HHJ45_05680 PF00356 Bacterial regulatory proteins, lacI family HHJ45_05685 PF13247 4Fe-4S dicluster domain HHJ45_05685 PF12800 4Fe-4S binding domain HHJ45_05690 PF07503 HypF finger HHJ45_05690 PF01300 Telomere recombination HHJ45_05690 PF00708 Acylphosphatase HHJ45_05690 PF17788 HypF Kae1-like domain HHJ45_05695 PF18113 Rubredoxin binding C-terminal domain HHJ45_05695 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_05700 PF00301 Rubredoxin HHJ45_05700 PF00753 Metallo-beta-lactamase superfamily HHJ45_05700 PF00258 Flavodoxin HHJ45_05705 PF01590 GAF domain HHJ45_05705 PF00158 Sigma-54 interaction domain HHJ45_05710 PF01380 SIS domain HHJ45_05710 PF00571 CBS domain HHJ45_05715 PF08220 DeoR-like helix-turn-helix domain HHJ45_05715 PF00455 DeoR C terminal sensor domain HHJ45_05720 PF06923 Glucitol operon activator protein (GutM) HHJ45_05725 PF00106 short chain dehydrogenase HHJ45_05730 PF03829 PTS system glucitol/sorbitol-specific IIA component HHJ45_05735 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HHJ45_05735 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HHJ45_05740 PF03608 PTS system enzyme II sorbitol-specific factor HHJ45_05745 PF13406 Transglycosylase SLT domain HHJ45_05750 PF02464 Competence-damaged protein HHJ45_05755 PF00154 recA bacterial DNA recombination protein HHJ45_05760 PF02631 RecX family HHJ45_05765 PF02272 DHHA1 domain HHJ45_05765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HHJ45_05765 PF01411 tRNA synthetases class II (A) HHJ45_05770 PF02599 Global regulator protein family HHJ45_05800 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_05805 PF09335 SNARE associated Golgi protein HHJ45_05810 PF04262 Glutamate-cysteine ligase HHJ45_05815 PF02664 S-Ribosylhomocysteinase (LuxS) HHJ45_05820 PF07690 Major Facilitator Superfamily HHJ45_05825 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_05825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_05830 PF01047 MarR family HHJ45_05840 PF05437 Branched-chain amino acid transport protein (AzlD) HHJ45_05845 PF03591 AzlC protein HHJ45_05850 PF07690 Major Facilitator Superfamily HHJ45_05855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HHJ45_05860 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_05865 PF00571 CBS domain HHJ45_05865 PF00005 ABC transporter HHJ45_05870 PF00268 Ribonucleotide reductase, small chain HHJ45_05875 PF02867 Ribonucleotide reductase, barrel domain HHJ45_05875 PF00317 Ribonucleotide reductase, all-alpha domain HHJ45_05875 PF08343 Ribonucleotide reductase N-terminal HHJ45_05880 PF07972 NrdI Flavodoxin like HHJ45_05885 PF00462 Glutaredoxin HHJ45_05890 PF05957 Bacterial protein of unknown function (DUF883) HHJ45_05895 PF09400 Protein of unknown function (DUF2002) HHJ45_05900 PF06610 L-alanine exporter HHJ45_05905 PF00816 H-NS histone family HHJ45_05910 PF11127 Protein of unknown function (DUF2892) HHJ45_05910 PF00581 Rhodanese-like domain HHJ45_05915 PF01022 Bacterial regulatory protein, arsR family HHJ45_05920 PF01679 Proteolipid membrane potential modulator HHJ45_05925 PF04972 BON domain HHJ45_05925 PF01476 LysM domain HHJ45_05930 PF07729 FCD domain HHJ45_05930 PF00392 Bacterial regulatory proteins, gntR family HHJ45_05935 PF00324 Amino acid permease HHJ45_05940 PF00202 Aminotransferase class-III HHJ45_05945 PF00171 Aldehyde dehydrogenase family HHJ45_05950 PF01266 FAD dependent oxidoreductase HHJ45_05955 PF08943 CsiD HHJ45_06010 PF00589 Phage integrase family HHJ45_06010 PF13356 Arm DNA-binding domain HHJ45_06020 PF01668 SmpB protein HHJ45_06025 PF03364 Polyketide cyclase / dehydrase and lipid transport HHJ45_06030 PF03658 RnfH family Ubiquitin HHJ45_06035 PF04355 SmpA / OmlA family HHJ45_06040 PF02463 RecF/RecN/SMC N terminal domain HHJ45_06045 PF01513 ATP-NAD kinase HHJ45_06050 PF01025 GrpE HHJ45_06055 PF00571 CBS domain HHJ45_06055 PF03471 Transporter associated domain HHJ45_06055 PF01595 Cyclin M transmembrane N-terminal domain HHJ45_06060 PF01578 Cytochrome C assembly protein HHJ45_06065 PF02881 SRP54-type protein, helical bundle domain HHJ45_06065 PF02978 Signal peptide binding domain HHJ45_06065 PF00448 SRP54-type protein, GTPase domain HHJ45_06070 PF00886 Ribosomal protein S16 HHJ45_06075 PF05239 PRC-barrel domain HHJ45_06075 PF01782 RimM N-terminal domain HHJ45_06080 PF01746 tRNA (Guanine-1)-methyltransferase HHJ45_06085 PF01245 Ribosomal protein L19 HHJ45_06090 PF00691 OmpA family HHJ45_06095 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_06095 PF17152 Periplasmic sensor domain HHJ45_06100 PF13689 YfiR/HmsC-like HHJ45_06105 PF10973 Protein of unknown function (DUF2799) HHJ45_06110 PF00793 DAHP synthetase I family HHJ45_06115 PF02153 Prephenate dehydrogenase HHJ45_06115 PF01817 Chorismate mutase type II HHJ45_06120 PF01817 Chorismate mutase type II HHJ45_06120 PF00800 Prephenate dehydratase HHJ45_06130 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HHJ45_06135 PF13525 Outer membrane lipoprotein HHJ45_06140 PF00849 RNA pseudouridylate synthase HHJ45_06140 PF01479 S4 domain HHJ45_06150 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ45_06150 PF17871 AAA lid domain HHJ45_06150 PF07724 AAA domain (Cdc48 subfamily) HHJ45_06150 PF00004 ATPase family associated with various cellular activities (AAA) HHJ45_06150 PF02861 Clp amino terminal domain, pathogenicity island component HHJ45_06175 PF00083 Sugar (and other) transporter HHJ45_06180 PF10043 Predicted periplasmic lipoprotein (DUF2279) HHJ45_06185 PF13091 PLD-like domain HHJ45_06190 PF13607 Succinyl-CoA ligase like flavodoxin domain HHJ45_06190 PF13380 CoA binding domain HHJ45_06190 PF00583 Acetyltransferase (GNAT) family HHJ45_06200 PF00085 Thioredoxin HHJ45_06205 PF08032 RNA 2'-O ribose methyltransferase substrate binding HHJ45_06205 PF00588 SpoU rRNA Methylase family HHJ45_06210 PF03167 Uracil DNA glycosylase superfamily HHJ45_06215 PF01228 Glycine radical HHJ45_06220 PF01810 LysE type translocator HHJ45_06225 PF03466 LysR substrate binding domain HHJ45_06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_06230 PF00271 Helicase conserved C-terminal domain HHJ45_06230 PF00270 DEAD/DEAH box helicase HHJ45_06235 PF05175 Methyltransferase small domain HHJ45_06240 PF00890 FAD binding domain HHJ45_06240 PF02910 Fumarate reductase flavoprotein C-term HHJ45_06250 PF04542 Sigma-70 region 2 HHJ45_06250 PF08281 Sigma-70, region 4 HHJ45_06255 PF03873 Anti sigma-E protein RseA, C-terminal domain HHJ45_06255 PF03872 Anti sigma-E protein RseA, N-terminal domain HHJ45_06260 PF03888 MucB/RseB N-terminal domain HHJ45_06260 PF17188 MucB/RseB C-terminal domain HHJ45_06270 PF00679 Elongation factor G C-terminus HHJ45_06270 PF06421 GTP-binding protein LepA C-terminus HHJ45_06270 PF03144 Elongation factor Tu domain 2 HHJ45_06270 PF00009 Elongation factor Tu GTP binding domain HHJ45_06275 PF10502 Signal peptidase, peptidase S26 HHJ45_06280 PF00035 Double-stranded RNA binding motif HHJ45_06280 PF14622 Ribonuclease-III-like HHJ45_06285 PF01926 50S ribosome-binding GTPase HHJ45_06285 PF07650 KH domain HHJ45_06290 PF11967 Recombination protein O N terminal HHJ45_06290 PF02565 Recombination protein O C terminal HHJ45_06295 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HHJ45_06300 PF01648 4'-phosphopantetheinyl transferase superfamily HHJ45_06310 PF12838 4Fe-4S dicluster domain HHJ45_06315 PF01380 SIS domain HHJ45_06315 PF01418 Helix-turn-helix domain, rpiR family HHJ45_06325 PF14437 MafB19-like deaminase HHJ45_06330 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_06330 PF01464 Transglycosylase SLT domain HHJ45_06335 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HHJ45_06335 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HHJ45_06335 PF02769 AIR synthase related protein, C-terminal domain HHJ45_06340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_06340 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_06345 PF13942 YfhG lipoprotein HHJ45_06350 PF00158 Sigma-54 interaction domain HHJ45_06350 PF00072 Response regulator receiver domain HHJ45_06355 PF00543 Nitrogen regulatory protein P-II HHJ45_06360 PF00042 Globin HHJ45_06360 PF00970 Oxidoreductase FAD-binding domain HHJ45_06360 PF00175 Oxidoreductase NAD-binding domain HHJ45_06365 PF00464 Serine hydroxymethyltransferase HHJ45_06370 PF00480 ROK family HHJ45_06380 PF13407 Periplasmic binding protein domain HHJ45_06385 PF00005 ABC transporter HHJ45_06390 PF02653 Branched-chain amino acid transport system / permease component HHJ45_06395 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_06395 PF00107 Zinc-binding dehydrogenase HHJ45_06400 PF01263 Aldose 1-epimerase HHJ45_06405 PF07681 DoxX HHJ45_06410 PF14759 Reductase C-terminal HHJ45_06410 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_06415 PF00106 short chain dehydrogenase HHJ45_06420 PF00355 Rieske [2Fe-2S] domain HHJ45_06425 PF00866 Ring hydroxylating beta subunit HHJ45_06430 PF00355 Rieske [2Fe-2S] domain HHJ45_06430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HHJ45_06435 PF03466 LysR substrate binding domain HHJ45_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_06440 PF12832 MFS_1 like family HHJ45_06445 PF00874 PRD domain HHJ45_06450 PF12146 Serine aminopeptidase, S33 HHJ45_06455 PF00459 Inositol monophosphatase family HHJ45_06460 PF00588 SpoU rRNA Methylase family HHJ45_06465 PF02082 Transcriptional regulator HHJ45_06470 PF00266 Aminotransferase class-V HHJ45_06475 PF01592 NifU-like N terminal domain HHJ45_06480 PF01521 Iron-sulphur cluster biosynthesis HHJ45_06485 PF07743 HSCB C-terminal oligomerisation domain HHJ45_06490 PF00012 Hsp70 protein HHJ45_06495 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_06500 PF04384 Iron-sulphur cluster assembly HHJ45_06505 PF12404 Peptidase HHJ45_06505 PF00883 Cytosol aminopeptidase family, catalytic domain HHJ45_06510 PF14581 SseB protein C-terminal domain HHJ45_06510 PF07179 SseB protein N-terminal domain HHJ45_06515 PF00581 Rhodanese-like domain HHJ45_06520 PF00207 Alpha-2-macroglobulin family HHJ45_06520 PF07678 A-macroglobulin TED domain HHJ45_06520 PF01835 MG2 domain HHJ45_06520 PF17962 Bacterial macroglobulin domain 6 HHJ45_06520 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HHJ45_06520 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HHJ45_06520 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HHJ45_06520 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HHJ45_06520 PF07703 Alpha-2-macroglobulin bait region domain HHJ45_06525 PF00912 Transglycosylase HHJ45_06525 PF06832 Penicillin-Binding Protein C-terminus Family HHJ45_06525 PF00905 Penicillin binding protein transpeptidase domain HHJ45_06530 PF00334 Nucleoside diphosphate kinase HHJ45_06535 PF04055 Radical SAM superfamily HHJ45_06540 PF13464 Domain of unknown function (DUF4115) HHJ45_06545 PF04551 GcpE protein HHJ45_06550 PF03129 Anticodon binding domain HHJ45_06550 PF13393 Histidyl-tRNA synthetase HHJ45_06555 PF09976 Tetratricopeptide repeat-like domain HHJ45_06560 PF13360 PQQ-like domain HHJ45_06565 PF01926 50S ribosome-binding GTPase HHJ45_06565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HHJ45_06570 PF07191 zinc-ribbons HHJ45_06575 PF02601 Exonuclease VII, large subunit HHJ45_06575 PF13742 OB-fold nucleic acid binding domain HHJ45_06580 PF00478 IMP dehydrogenase / GMP reductase domain HHJ45_06580 PF00571 CBS domain HHJ45_06585 PF02540 NAD synthase HHJ45_06585 PF00958 GMP synthase C terminal domain HHJ45_06585 PF00117 Glutamine amidotransferase class-I HHJ45_06590 PF17358 Family of unknown function (DUF5384) HHJ45_06595 PF05433 Glycine zipper 2TM domain HHJ45_06600 PF11119 Protein of unknown function (DUF2633) HHJ45_06610 PF05231 MASE1 HHJ45_06610 PF00563 EAL domain HHJ45_06615 PF02541 Ppx/GppA phosphatase family HHJ45_06620 PF13090 Polyphosphate kinase C-terminal domain 2 HHJ45_06620 PF02503 Polyphosphate kinase middle domain HHJ45_06620 PF13089 Polyphosphate kinase N-terminal domain HHJ45_06620 PF17941 Polyphosphate kinase C-terminal domain 1 HHJ45_06625 PF00551 Formyl transferase HHJ45_06630 PF00586 AIR synthase related protein, N-terminal domain HHJ45_06630 PF02769 AIR synthase related protein, C-terminal domain HHJ45_06640 PF00860 Permease family HHJ45_06645 PF00308 Bacterial dnaA protein HHJ45_06650 PF03960 ArsC family HHJ45_06655 PF01435 Peptidase family M48 HHJ45_06660 PF01594 AI-2E family transporter HHJ45_06675 PF07450 Formate hydrogenlyase maturation protein HycH HHJ45_06685 PF12838 4Fe-4S dicluster domain HHJ45_06690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HHJ45_06690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HHJ45_06690 PF00374 Nickel-dependent hydrogenase HHJ45_06695 PF00361 Proton-conducting membrane transporter HHJ45_06695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HHJ45_06700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HHJ45_06710 PF00146 NADH dehydrogenase HHJ45_06715 PF00361 Proton-conducting membrane transporter HHJ45_06720 PF00037 4Fe-4S binding domain HHJ45_06720 PF12798 4Fe-4S binding domain HHJ45_06725 PF00578 AhpC/TSA family HHJ45_06730 PF01842 ACT domain HHJ45_06735 PF00701 Dihydrodipicolinate synthetase family HHJ45_06740 PF06804 NlpB/DapX lipoprotein HHJ45_06745 PF01259 SAICAR synthetase HHJ45_06750 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HHJ45_06755 PF01850 PIN domain HHJ45_06760 PF04228 Putative neutral zinc metallopeptidase HHJ45_06765 PF13718 GNAT acetyltransferase 2 HHJ45_06765 PF05127 Helicase HHJ45_06765 PF17176 tRNA-binding domain HHJ45_06765 PF08351 Domain of unknown function (DUF1726) HHJ45_06770 PF02230 Phospholipase/Carboxylesterase HHJ45_06775 PF13980 Uncharacterised protein family (UPF0370) HHJ45_06780 PF07687 Peptidase dimerisation domain HHJ45_06780 PF01546 Peptidase family M20/M25/M40 HHJ45_06785 PF03960 ArsC family HHJ45_06795 PF00873 AcrB/AcrD/AcrF family HHJ45_06800 PF07730 Histidine kinase HHJ45_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_06800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HHJ45_06800 PF00672 HAMP domain HHJ45_06805 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_06805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HHJ45_06805 PF13247 4Fe-4S dicluster domain HHJ45_06810 PF00293 NUDIX domain HHJ45_06815 PF06674 Protein of unknown function (DUF1176) HHJ45_06820 PF02779 Transketolase, pyrimidine binding domain HHJ45_06820 PF00456 Transketolase, thiamine diphosphate binding domain HHJ45_06820 PF02780 Transketolase, C-terminal domain HHJ45_06825 PF00923 Transaldolase/Fructose-6-phosphate aldolase HHJ45_06830 PF03949 Malic enzyme, NAD binding domain HHJ45_06830 PF01515 Phosphate acetyl/butaryl transferase HHJ45_06830 PF00390 Malic enzyme, N-terminal domain HHJ45_06835 PF00936 BMC domain HHJ45_06840 PF10662 Ethanolamine utilisation - propanediol utilisation HHJ45_06845 PF06249 Ethanolamine utilisation protein EutQ HHJ45_06850 PF01923 Cobalamin adenosyltransferase HHJ45_06855 PF01515 Phosphate acetyl/butaryl transferase HHJ45_06860 PF00936 BMC domain HHJ45_06865 PF03319 Ethanolamine utilisation protein EutN/carboxysome HHJ45_06870 PF00171 Aldehyde dehydrogenase family HHJ45_06880 PF00465 Iron-containing alcohol dehydrogenase HHJ45_06885 PF04346 Ethanolamine utilisation protein, EutH HHJ45_06890 PF06277 Ethanolamine utilisation protein EutA HHJ45_06895 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HHJ45_06900 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HHJ45_06905 PF00936 BMC domain HHJ45_06910 PF16365 Ethanolamine utilization protein EutK C-terminus HHJ45_06910 PF00936 BMC domain HHJ45_06915 PF12833 Helix-turn-helix domain HHJ45_06920 PF01218 Coproporphyrinogen III oxidase HHJ45_06925 PF01520 N-acetylmuramoyl-L-alanine amidase HHJ45_06930 PF00583 Acetyltransferase (GNAT) family HHJ45_06935 PF11143 Protein of unknown function (DUF2919) HHJ45_06940 PF06572 Protein of unknown function (DUF1131) HHJ45_06945 PF04261 Dyp-type peroxidase family HHJ45_06950 PF00144 Beta-lactamase HHJ45_06955 PF02378 Phosphotransferase system, EIIC HHJ45_06955 PF00367 phosphotransferase system, EIIB HHJ45_06960 PF01380 SIS domain HHJ45_06965 PF01380 SIS domain HHJ45_06965 PF01418 Helix-turn-helix domain, rpiR family HHJ45_06980 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_06985 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_06990 PF00005 ABC transporter HHJ45_06995 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_07000 PF17263 Family of unknown function (DUF5329) HHJ45_07005 PF08543 Phosphomethylpyrimidine kinase HHJ45_07010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HHJ45_07015 PF00391 PEP-utilising enzyme, mobile domain HHJ45_07015 PF02896 PEP-utilising enzyme, TIM barrel domain HHJ45_07015 PF05524 PEP-utilising enzyme, N-terminal HHJ45_07020 PF00381 PTS HPr component phosphorylation site HHJ45_07025 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_07035 PF04354 ZipA, C-terminal FtsZ-binding domain HHJ45_07040 PF12826 Helix-hairpin-helix motif HHJ45_07040 PF03120 NAD-dependent DNA ligase OB-fold domain HHJ45_07040 PF00533 BRCA1 C Terminus (BRCT) domain HHJ45_07040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HHJ45_07040 PF01653 NAD-dependent DNA ligase adenylation domain HHJ45_07045 PF12843 Putative quorum-sensing-regulated virulence factor HHJ45_07050 PF13593 SBF-like CPA transporter family (DUF4137) HHJ45_07055 PF03466 LysR substrate binding domain HHJ45_07055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_07060 PF03502 Nucleoside-specific channel-forming protein, Tsx HHJ45_07065 PF01048 Phosphorylase superfamily HHJ45_07070 PF03825 Nucleoside H+ symporter HHJ45_07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_07080 PF03466 LysR substrate binding domain HHJ45_07115 PF00749 tRNA synthetases class I (E and Q), catalytic domain HHJ45_07120 PF07037 Putative transcription regulator (DUF1323) HHJ45_07125 PF07037 Putative transcription regulator (DUF1323) HHJ45_07140 PF00563 EAL domain HHJ45_07140 PF05231 MASE1 HHJ45_07145 PF07662 Na+ dependent nucleoside transporter C-terminus HHJ45_07145 PF01773 Na+ dependent nucleoside transporter N-terminus HHJ45_07145 PF07670 Nucleoside recognition HHJ45_07150 PF01566 Natural resistance-associated macrophage protein HHJ45_07155 PF10697 Protein of unknown function (DUF2502) HHJ45_07160 PF00654 Voltage gated chloride channel HHJ45_07165 PF02685 Glucokinase HHJ45_07170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_07175 PF02378 Phosphotransferase system, EIIC HHJ45_07180 PF00557 Metallopeptidase family M24 HHJ45_07180 PF01321 Creatinase/Prolidase N-terminal domain HHJ45_07185 PF05343 M42 glutamyl aminopeptidase HHJ45_07190 PF00381 PTS HPr component phosphorylation site HHJ45_07190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_07190 PF05524 PEP-utilising enzyme, N-terminal HHJ45_07190 PF02896 PEP-utilising enzyme, TIM barrel domain HHJ45_07190 PF00391 PEP-utilising enzyme, mobile domain HHJ45_07195 PF12833 Helix-turn-helix domain HHJ45_07200 PF04397 LytTr DNA-binding domain HHJ45_07200 PF00072 Response regulator receiver domain HHJ45_07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_07205 PF06580 Histidine kinase HHJ45_07205 PF07694 5TMR of 5TMR-LYT HHJ45_07210 PF00155 Aminotransferase class I and II HHJ45_07220 PF03279 Bacterial lipid A biosynthesis acyltransferase HHJ45_07225 PF10810 Protein of unknown function (DUF2545) HHJ45_07235 PF10938 YfdX protein HHJ45_07240 PF02515 CoA-transferase family III HHJ45_07245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_07245 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ45_07245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ45_07250 PF03547 Membrane transport protein HHJ45_07255 PF02515 CoA-transferase family III HHJ45_07260 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_07260 PF00072 Response regulator receiver domain HHJ45_07260 PF01627 Hpt domain HHJ45_07260 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_07265 PF00072 Response regulator receiver domain HHJ45_07265 PF00196 Bacterial regulatory proteins, luxR family HHJ45_07270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_07270 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_07275 PF07690 Major Facilitator Superfamily HHJ45_07280 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_07290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ45_07290 PF00356 Bacterial regulatory proteins, lacI family HHJ45_07295 PF08244 Glycosyl hydrolases family 32 C terminal HHJ45_07295 PF00251 Glycosyl hydrolases family 32 N-terminal domain HHJ45_07300 PF00294 pfkB family carbohydrate kinase HHJ45_07305 PF01306 LacY proton/sugar symporter HHJ45_07355 PF03837 RecT family HHJ45_07390 PF01381 Helix-turn-helix HHJ45_07390 PF00717 Peptidase S24-like HHJ45_07415 PF03796 DnaB-like helicase C terminal domain HHJ45_07420 PF05772 NinB protein HHJ45_07450 PF00149 Calcineurin-like phosphoesterase HHJ45_07480 PF03245 Bacteriophage Rz lysis protein HHJ45_07490 PF17288 Terminase RNAseH like domain HHJ45_07490 PF04466 Phage terminase large subunit HHJ45_07495 PF06381 Protein of unknown function (DUF1073) HHJ45_07635 PF00589 Phage integrase family HHJ45_07635 PF14659 Phage integrase, N-terminal SAM-like domain HHJ45_07635 PF13356 Arm DNA-binding domain HHJ45_07645 PF01226 Formate/nitrite transporter HHJ45_07650 PF04333 MlaA lipoprotein HHJ45_07665 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HHJ45_07670 PF04175 Protein of unknown function (DUF406) HHJ45_07675 PF02803 Thiolase, C-terminal domain HHJ45_07675 PF00108 Thiolase, N-terminal domain HHJ45_07680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HHJ45_07680 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_07680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HHJ45_07685 PF00300 Histidine phosphatase superfamily (branch 1) HHJ45_07690 PF00419 Fimbrial protein HHJ45_07695 PF13954 PapC N-terminal domain HHJ45_07695 PF13953 PapC C-terminal domain HHJ45_07695 PF00577 Outer membrane usher protein HHJ45_07700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_07700 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_07705 PF00419 Fimbrial protein HHJ45_07710 PF00419 Fimbrial protein HHJ45_07715 PF00419 Fimbrial protein HHJ45_07720 PF11245 Protein of unknown function (DUF2544) HHJ45_07725 PF01713 Smr domain HHJ45_07730 PF05175 Methyltransferase small domain HHJ45_07735 PF01264 Chorismate synthase HHJ45_07740 PF03411 Penicillin-insensitive murein endopeptidase HHJ45_07745 PF01925 Sulfite exporter TauE/SafE HHJ45_07750 PF04315 Elongation factor P hydroxylase HHJ45_07755 PF08891 YfcL protein HHJ45_07760 PF01266 FAD dependent oxidoreductase HHJ45_07760 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HHJ45_07765 PF00109 Beta-ketoacyl synthase, N-terminal domain HHJ45_07765 PF02801 Beta-ketoacyl synthase, C-terminal domain HHJ45_07770 PF07690 Major Facilitator Superfamily HHJ45_07780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HHJ45_07780 PF11890 Domain of unknown function (DUF3410) HHJ45_07780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ45_07785 PF02774 Semialdehyde dehydrogenase, dimerisation domain HHJ45_07785 PF01118 Semialdehyde dehydrogenase, NAD binding domain HHJ45_07790 PF01416 tRNA pseudouridine synthase HHJ45_07795 PF09335 SNARE associated Golgi protein HHJ45_07800 PF17848 Acetyl-coA carboxylase zinc finger domain HHJ45_07800 PF01039 Carboxyl transferase domain HHJ45_07805 PF08245 Mur ligase middle domain HHJ45_07805 PF02875 Mur ligase family, glutamate ligase domain HHJ45_07810 PF05036 Sporulation related domain HHJ45_07815 PF02674 Colicin V production protein HHJ45_07820 PF00156 Phosphoribosyl transferase domain HHJ45_07825 PF02441 Flavoprotein HHJ45_07830 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_07835 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_07840 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_07845 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_07850 PF00005 ABC transporter HHJ45_07855 PF04754 Putative transposase, YhgA-like HHJ45_07860 PF01370 NAD dependent epimerase/dehydratase family HHJ45_07860 PF08338 Domain of unknown function (DUF1731) HHJ45_07865 PF02152 Dihydroneopterin aldolase HHJ45_07870 PF00043 Glutathione S-transferase, C-terminal domain HHJ45_07870 PF02798 Glutathione S-transferase, N-terminal domain HHJ45_07875 PF02798 Glutathione S-transferase, N-terminal domain HHJ45_07875 PF14834 Glutathione S-transferase, C-terminal domain HHJ45_07880 PF12850 Calcineurin-like phosphoesterase superfamily domain HHJ45_07885 PF00293 NUDIX domain HHJ45_07890 PF03606 C4-dicarboxylate anaerobic carrier HHJ45_07895 PF07085 DRTGG domain HHJ45_07895 PF01515 Phosphate acetyl/butaryl transferase HHJ45_07900 PF00871 Acetokinase family HHJ45_07905 PF04217 Protein of unknown function, DUF412 HHJ45_07910 PF03887 YfbU domain HHJ45_07915 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_07920 PF03600 Citrate transporter HHJ45_07920 PF02080 TrkA-C domain HHJ45_07930 PF00155 Aminotransferase class I and II HHJ45_07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_07935 PF03466 LysR substrate binding domain HHJ45_07940 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HHJ45_07945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HHJ45_07950 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HHJ45_07950 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HHJ45_07960 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HHJ45_07960 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HHJ45_07960 PF10531 SLBB domain HHJ45_07965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HHJ45_07965 PF00384 Molybdopterin oxidoreductase HHJ45_07965 PF01568 Molydopterin dinucleotide binding domain HHJ45_07965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HHJ45_07970 PF00146 NADH dehydrogenase HHJ45_07975 PF12838 4Fe-4S dicluster domain HHJ45_07980 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HHJ45_07985 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HHJ45_07990 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HHJ45_07990 PF00361 Proton-conducting membrane transporter HHJ45_07995 PF00361 Proton-conducting membrane transporter HHJ45_08000 PF00361 Proton-conducting membrane transporter HHJ45_08005 PF08974 Domain of unknown function (DUF1877) HHJ45_08020 PF12706 Beta-lactamase superfamily domain HHJ45_08025 PF13673 Acetyltransferase (GNAT) domain HHJ45_08030 PF05957 Bacterial protein of unknown function (DUF883) HHJ45_08035 PF00425 chorismate binding enzyme HHJ45_08040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ45_08040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_08040 PF16582 Middle domain of thiamine pyrophosphate HHJ45_08050 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_08055 PF13378 Enolase C-terminal domain-like HHJ45_08060 PF00501 AMP-binding enzyme HHJ45_08060 PF13193 AMP-binding enzyme C-terminal domain HHJ45_08075 PF00892 EamA-like transporter family HHJ45_08080 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HHJ45_08085 PF01522 Polysaccharide deacetylase HHJ45_08090 PF01370 NAD dependent epimerase/dehydratase family HHJ45_08090 PF02911 Formyl transferase, C-terminal domain HHJ45_08090 PF00551 Formyl transferase HHJ45_08095 PF00535 Glycosyl transferase family 2 HHJ45_08100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HHJ45_08105 PF00300 Histidine phosphatase superfamily (branch 1) HHJ45_08110 PF00293 NUDIX domain HHJ45_08115 PF07437 YfaZ precursor HHJ45_08120 PF00994 Probable molybdopterin binding domain HHJ45_08125 PF03328 HpcH/HpaI aldolase/citrate lyase family HHJ45_08130 PF04754 Putative transposase, YhgA-like HHJ45_08135 PF13183 4Fe-4S dicluster domain HHJ45_08135 PF02754 Cysteine-rich domain HHJ45_08140 PF00890 FAD binding domain HHJ45_08145 PF04324 BFD-like [2Fe-2S] binding domain HHJ45_08145 PF01266 FAD dependent oxidoreductase HHJ45_08150 PF07690 Major Facilitator Superfamily HHJ45_08155 PF03009 Glycerophosphoryl diester phosphodiesterase family HHJ45_08170 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_08175 PF00268 Ribonucleotide reductase, small chain HHJ45_08180 PF02867 Ribonucleotide reductase, barrel domain HHJ45_08180 PF03477 ATP cone domain HHJ45_08180 PF00317 Ribonucleotide reductase, all-alpha domain HHJ45_08200 PF00521 DNA gyrase/topoisomerase IV, subunit A HHJ45_08200 PF03989 DNA gyrase C-terminal domain, beta-propeller HHJ45_08205 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) HHJ45_08210 PF06672 Protein of unknown function (DUF1175) HHJ45_08215 PF07703 Alpha-2-macroglobulin bait region domain HHJ45_08215 PF01835 MG2 domain HHJ45_08215 PF00207 Alpha-2-macroglobulin family HHJ45_08220 PF10062 Predicted secreted protein (DUF2300) HHJ45_08220 PF08486 Stage II sporulation protein HHJ45_08225 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) HHJ45_08230 PF00072 Response regulator receiver domain HHJ45_08230 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_08230 PF09456 RcsC Alpha-Beta-Loop (ABL) HHJ45_08235 PF00196 Bacterial regulatory proteins, luxR family HHJ45_08235 PF00072 Response regulator receiver domain HHJ45_08240 PF16359 RcsD-ABL domain HHJ45_08240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_08240 PF01627 Hpt domain HHJ45_08245 PF00267 Gram-negative porin HHJ45_08250 PF02424 ApbE family HHJ45_08255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HHJ45_08255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HHJ45_08255 PF12833 Helix-turn-helix domain HHJ45_08255 PF02805 Metal binding domain of Ada HHJ45_08260 PF13532 2OG-Fe(II) oxygenase superfamily HHJ45_08265 PF00005 ABC transporter HHJ45_08270 PF06039 Malate:quinone oxidoreductase (Mqo) HHJ45_08275 PF03974 Ecotin HHJ45_08285 PF13187 4Fe-4S dicluster domain HHJ45_08285 PF12800 4Fe-4S binding domain HHJ45_08285 PF00037 4Fe-4S binding domain HHJ45_08290 PF03927 NapD protein HHJ45_08295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HHJ45_08295 PF00384 Molybdopterin oxidoreductase HHJ45_08295 PF01568 Molydopterin dinucleotide binding domain HHJ45_08300 PF12838 4Fe-4S dicluster domain HHJ45_08300 PF12800 4Fe-4S binding domain HHJ45_08305 PF13237 4Fe-4S dicluster domain HHJ45_08305 PF12801 4Fe-4S binding domain HHJ45_08310 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HHJ45_08315 PF03264 NapC/NirT cytochrome c family, N-terminal region HHJ45_08320 PF00005 ABC transporter HHJ45_08325 PF03379 CcmB protein HHJ45_08330 PF01578 Cytochrome C assembly protein HHJ45_08335 PF04995 Heme exporter protein D (CcmD) HHJ45_08340 PF03100 CcmE HHJ45_08345 PF01578 Cytochrome C assembly protein HHJ45_08345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HHJ45_08350 PF08534 Redoxin HHJ45_08355 PF03918 Cytochrome C biogenesis protein HHJ45_08360 PF00196 Bacterial regulatory proteins, luxR family HHJ45_08360 PF00072 Response regulator receiver domain HHJ45_08375 PF11893 Domain of unknown function (DUF3413) HHJ45_08375 PF00884 Sulfatase HHJ45_08380 PF07208 Protein of unknown function (DUF1414) HHJ45_08385 PF04245 37-kD nucleoid-associated bacterial protein HHJ45_08390 PF01386 Ribosomal L25p family HHJ45_08395 PF00271 Helicase conserved C-terminal domain HHJ45_08395 PF04851 Type III restriction enzyme, res subunit HHJ45_08400 PF00849 RNA pseudouridylate synthase HHJ45_08400 PF01479 S4 domain HHJ45_08405 PF07690 Major Facilitator Superfamily HHJ45_08410 PF13989 YejG-like protein HHJ45_08415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_08415 PF00005 ABC transporter HHJ45_08420 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_08420 PF12911 N-terminal TM domain of oligopeptide transport permease C HHJ45_08425 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_08430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_08435 PF00563 EAL domain HHJ45_08435 PF12792 CSS motif domain associated with EAL HHJ45_08440 PF00877 NlpC/P60 family HHJ45_08445 PF01569 PAP2 superfamily HHJ45_08450 PF07683 Cobalamin synthesis protein cobW C-terminal domain HHJ45_08450 PF02492 CobW/HypB/UreG, nucleotide-binding domain HHJ45_08455 PF08125 Mannitol dehydrogenase C-terminal domain HHJ45_08455 PF01232 Mannitol dehydrogenase Rossmann domain HHJ45_08460 PF01132 Elongation factor P (EF-P) OB domain HHJ45_08460 PF09285 Elongation factor P, C-terminal HHJ45_08460 PF08207 Elongation factor P (EF-P) KOW-like domain HHJ45_08465 PF03692 Putative zinc- or iron-chelating domain HHJ45_08470 PF07690 Major Facilitator Superfamily HHJ45_08475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_08475 PF00381 PTS HPr component phosphorylation site HHJ45_08480 PF00294 pfkB family carbohydrate kinase HHJ45_08485 PF02378 Phosphotransferase system, EIIC HHJ45_08485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_08490 PF00294 pfkB family carbohydrate kinase HHJ45_08495 PF04227 Indigoidine synthase A like protein HHJ45_08500 PF01773 Na+ dependent nucleoside transporter N-terminus HHJ45_08500 PF07662 Na+ dependent nucleoside transporter C-terminus HHJ45_08505 PF00027 Cyclic nucleotide-binding domain HHJ45_08510 PF01156 Inosine-uridine preferring nucleoside hydrolase HHJ45_08515 PF07662 Na+ dependent nucleoside transporter C-terminus HHJ45_08515 PF01773 Na+ dependent nucleoside transporter N-terminus HHJ45_08520 PF00294 pfkB family carbohydrate kinase HHJ45_08525 PF01261 Xylose isomerase-like TIM barrel HHJ45_08530 PF03601 Conserved hypothetical protein 698 HHJ45_08535 PF03466 LysR substrate binding domain HHJ45_08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_08540 PF00324 Amino acid permease HHJ45_08545 PF07715 TonB-dependent Receptor Plug Domain HHJ45_08545 PF00593 TonB dependent receptor HHJ45_08550 PF00756 Putative esterase HHJ45_08555 PF01227 GTP cyclohydrolase I HHJ45_08560 PF04235 Protein of unknown function (DUF418) HHJ45_08565 PF00356 Bacterial regulatory proteins, lacI family HHJ45_08570 PF13407 Periplasmic binding protein domain HHJ45_08575 PF00005 ABC transporter HHJ45_08580 PF02653 Branched-chain amino acid transport system / permease component HHJ45_08585 PF01180 Dihydroorotate dehydrogenase HHJ45_08590 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_08590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HHJ45_08595 PF10808 Protein of unknown function (DUF2542) HHJ45_08600 PF02698 DUF218 domain HHJ45_08605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HHJ45_08605 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HHJ45_08610 PF04172 LrgB-like family HHJ45_08615 PF03788 LrgA family HHJ45_08620 PF01207 Dihydrouridine synthase (Dus) HHJ45_08630 PF02321 Outer membrane efflux protein HHJ45_08640 PF09335 SNARE associated Golgi protein HHJ45_08645 PF04893 Yip1 domain HHJ45_08650 PF00768 D-alanyl-D-alanine carboxypeptidase HHJ45_08655 PF01565 FAD binding domain HHJ45_08655 PF09330 D-lactate dehydrogenase, membrane binding HHJ45_08660 PF00933 Glycosyl hydrolase family 3 N terminal domain HHJ45_08660 PF14310 Fibronectin type III-like domain HHJ45_08660 PF01915 Glycosyl hydrolase family 3 C-terminal domain HHJ45_08665 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HHJ45_08670 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_08675 PF00005 ABC transporter HHJ45_08680 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_08695 PF07694 5TMR of 5TMR-LYT HHJ45_08695 PF06580 Histidine kinase HHJ45_08700 PF00072 Response regulator receiver domain HHJ45_08700 PF04397 LytTr DNA-binding domain HHJ45_08705 PF07308 Protein of unknown function (DUF1456) HHJ45_08710 PF06998 Protein of unknown function (DUF1307) HHJ45_08715 PF04434 SWIM zinc finger HHJ45_08720 PF05762 VWA domain containing CoxE-like protein HHJ45_08730 PF07728 AAA domain (dynein-related subfamily) HHJ45_08740 PF13569 Domain of unknown function (DUF4132) HHJ45_08745 PF13569 Domain of unknown function (DUF4132) HHJ45_08750 PF09334 tRNA synthetases class I (M) HHJ45_08750 PF01588 Putative tRNA binding domain HHJ45_08755 PF10609 NUBPL iron-transfer P-loop NTPase HHJ45_08760 PF10836 Protein of unknown function (DUF2574) HHJ45_08765 PF00419 Fimbrial protein HHJ45_08770 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_08770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_08775 PF00577 Outer membrane usher protein HHJ45_08775 PF13954 PapC N-terminal domain HHJ45_08775 PF13953 PapC C-terminal domain HHJ45_08780 PF00419 Fimbrial protein HHJ45_08785 PF11776 Nickel/cobalt transporter regulator HHJ45_08795 PF02583 Metal-sensitive transcriptional repressor HHJ45_08800 PF02110 Hydroxyethylthiazole kinase family HHJ45_08805 PF08543 Phosphomethylpyrimidine kinase HHJ45_08810 PF01183 Glycosyl hydrolases family 25 HHJ45_08815 PF00392 Bacterial regulatory proteins, gntR family HHJ45_08815 PF07702 UTRA domain HHJ45_08820 PF00294 pfkB family carbohydrate kinase HHJ45_08825 PF03747 ADP-ribosylglycohydrolase HHJ45_08830 PF03825 Nucleoside H+ symporter HHJ45_08835 PF01791 DeoC/LacD family aldolase HHJ45_08840 PF01116 Fructose-bisphosphate aldolase class-II HHJ45_08845 PF08013 Tagatose 6 phosphate kinase HHJ45_08850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_08855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_08860 PF03611 PTS system sugar-specific permease component HHJ45_08865 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_08865 PF00107 Zinc-binding dehydrogenase HHJ45_08870 PF08220 DeoR-like helix-turn-helix domain HHJ45_08875 PF00781 Diacylglycerol kinase catalytic domain HHJ45_08890 PF07411 Domain of unknown function (DUF1508) HHJ45_08895 PF00486 Transcriptional regulatory protein, C terminal HHJ45_08895 PF00072 Response regulator receiver domain HHJ45_08900 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_08900 PF00672 HAMP domain HHJ45_08905 PF07690 Major Facilitator Superfamily HHJ45_08910 PF00873 AcrB/AcrD/AcrF family HHJ45_08915 PF00873 AcrB/AcrD/AcrF family HHJ45_08920 PF13533 Biotin-lipoyl like HHJ45_08935 PF00092 von Willebrand factor type A domain HHJ45_08945 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) HHJ45_08955 PF00012 Hsp70 protein HHJ45_08960 PF06029 AlkA N-terminal domain HHJ45_08960 PF00730 HhH-GPD superfamily base excision DNA repair protein HHJ45_08970 PF00485 Phosphoribulokinase / Uridine kinase family HHJ45_08975 PF00692 dUTPase HHJ45_08980 PF05170 AsmA family HHJ45_08985 PF00571 CBS domain HHJ45_08985 PF03471 Transporter associated domain HHJ45_08985 PF03741 Integral membrane protein TerC family HHJ45_08990 PF00483 Nucleotidyl transferase HHJ45_08995 PF01569 PAP2 superfamily HHJ45_09005 PF14052 Capsule assembly protein Wzi HHJ45_09010 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HHJ45_09010 PF02563 Polysaccharide biosynthesis/export protein HHJ45_09010 PF10531 SLBB domain HHJ45_09015 PF01451 Low molecular weight phosphotyrosine protein phosphatase HHJ45_09050 PF00535 Glycosyl transferase family 2 HHJ45_09070 PF01370 NAD dependent epimerase/dehydratase family HHJ45_09080 PF13579 Glycosyl transferase 4-like domain HHJ45_09080 PF00534 Glycosyl transferases group 1 HHJ45_09090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HHJ45_09090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HHJ45_09110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HHJ45_09110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HHJ45_09110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HHJ45_09135 PF14524 Wzt C-terminal domain HHJ45_09135 PF00005 ABC transporter HHJ45_09140 PF08241 Methyltransferase domain HHJ45_09150 PF13439 Glycosyltransferase Family 4 HHJ45_09150 PF00534 Glycosyl transferases group 1 HHJ45_09160 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HHJ45_09160 PF01502 Phosphoribosyl-AMP cyclohydrolase HHJ45_09165 PF00977 Histidine biosynthesis protein HHJ45_09170 PF00977 Histidine biosynthesis protein HHJ45_09175 PF00117 Glutamine amidotransferase class-I HHJ45_09180 PF08645 Polynucleotide kinase 3 phosphatase HHJ45_09180 PF00475 Imidazoleglycerol-phosphate dehydratase HHJ45_09185 PF00155 Aminotransferase class I and II HHJ45_09190 PF00815 Histidinol dehydrogenase HHJ45_09195 PF01634 ATP phosphoribosyltransferase HHJ45_09195 PF08029 HisG, C-terminal domain HHJ45_09205 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HHJ45_09210 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HHJ45_09215 PF01370 NAD dependent epimerase/dehydratase family HHJ45_09220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_09220 PF03466 LysR substrate binding domain HHJ45_09230 PF13520 Amino acid permease HHJ45_09240 PF01206 Sulfurtransferase TusA HHJ45_09245 PF08411 Exonuclease C-terminal HHJ45_09245 PF00929 Exonuclease HHJ45_09250 PF00768 D-alanyl-D-alanine carboxypeptidase HHJ45_09250 PF07943 Penicillin-binding protein 5, C-terminal domain HHJ45_09255 PF06445 GyrI-like small molecule binding domain HHJ45_09260 PF04632 Fusaric acid resistance protein family HHJ45_09265 PF04363 Protein of unknown function (DUF496) HHJ45_09270 PF10662 Ethanolamine utilisation - propanediol utilisation HHJ45_09290 PF06755 CbtA_toxin of type IV toxin-antitoxin system HHJ45_09295 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HHJ45_09300 PF06174 Protein of unknown function (DUF987) HHJ45_09305 PF04002 RadC-like JAB domain HHJ45_09310 PF03230 Antirestriction protein HHJ45_09315 PF06067 Domain of unknown function (DUF932) HHJ45_09335 PF13990 YjcZ-like protein HHJ45_09340 PF00350 Dynamin family HHJ45_09360 PF00665 Integrase core domain HHJ45_09360 PF02796 Helix-turn-helix domain of resolvase HHJ45_09365 PF01695 IstB-like ATP binding protein HHJ45_09410 PF02126 Phosphotriesterase family HHJ45_09450 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HHJ45_09455 PF02654 Cobalamin-5-phosphate synthase HHJ45_09460 PF02277 Phosphoribosyltransferase HHJ45_09465 PF17969 L,D-transpeptidase C-terminal domain HHJ45_09465 PF03734 L,D-transpeptidase catalytic domain HHJ45_09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_09475 PF03466 LysR substrate binding domain HHJ45_09480 PF03466 LysR substrate binding domain HHJ45_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_09490 PF01554 MatE HHJ45_09500 PF01709 Transcriptional regulator HHJ45_09505 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HHJ45_09505 PF01048 Phosphorylase superfamily HHJ45_09510 PF00083 Sugar (and other) transporter HHJ45_09510 PF07690 Major Facilitator Superfamily HHJ45_09520 PF11924 Inverse autotransporter, beta-domain HHJ45_09520 PF09134 Invasin, domain 3 HHJ45_09520 PF02369 Bacterial Ig-like domain (group 1) HHJ45_09525 PF02369 Bacterial Ig-like domain (group 1) HHJ45_09525 PF11924 Inverse autotransporter, beta-domain HHJ45_09525 PF09134 Invasin, domain 3 HHJ45_09530 PF09134 Invasin, domain 3 HHJ45_09530 PF11924 Inverse autotransporter, beta-domain HHJ45_09530 PF02369 Bacterial Ig-like domain (group 1) HHJ45_09535 PF07715 TonB-dependent Receptor Plug Domain HHJ45_09535 PF00593 TonB dependent receptor HHJ45_09540 PF13193 AMP-binding enzyme C-terminal domain HHJ45_09540 PF00501 AMP-binding enzyme HHJ45_09545 PF00975 Thioesterase domain HHJ45_09555 PF02801 Beta-ketoacyl synthase, C-terminal domain HHJ45_09555 PF00698 Acyl transferase domain HHJ45_09555 PF00668 Condensation domain HHJ45_09555 PF16197 Ketoacyl-synthetase C-terminal extension HHJ45_09555 PF00109 Beta-ketoacyl synthase, N-terminal domain HHJ45_09555 PF00550 Phosphopantetheine attachment site HHJ45_09560 PF00668 Condensation domain HHJ45_09560 PF00550 Phosphopantetheine attachment site HHJ45_09560 PF00501 AMP-binding enzyme HHJ45_09560 PF08242 Methyltransferase domain HHJ45_09570 PF00664 ABC transporter transmembrane region HHJ45_09570 PF08021 Siderophore-interacting FAD-binding domain HHJ45_09570 PF04954 Siderophore-interacting protein HHJ45_09570 PF00005 ABC transporter HHJ45_09575 PF00005 ABC transporter HHJ45_09575 PF00664 ABC transporter transmembrane region HHJ45_09580 PF07690 Major Facilitator Superfamily HHJ45_09585 PF00425 chorismate binding enzyme HHJ45_09590 PF00589 Phage integrase family HHJ45_09590 PF13356 Arm DNA-binding domain HHJ45_09600 PF06167 Glucose-regulated metallo-peptidase M90 HHJ45_09670 PF02086 D12 class N6 adenine-specific DNA methyltransferase HHJ45_09675 PF05866 Endodeoxyribonuclease RusA HHJ45_09680 PF06147 Protein of unknown function (DUF968) HHJ45_09745 PF03354 Phage Terminase HHJ45_09750 PF04860 Phage portal protein HHJ45_09755 PF00574 Clp protease HHJ45_09865 PF00717 Peptidase S24-like HHJ45_09870 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HHJ45_09875 PF01794 Ferric reductase like transmembrane component HHJ45_09880 PF00174 Oxidoreductase molybdopterin binding domain HHJ45_09885 PF00576 HIUase/Transthyretin family HHJ45_09890 PF00486 Transcriptional regulatory protein, C terminal HHJ45_09890 PF00072 Response regulator receiver domain HHJ45_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_09895 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_09900 PF01965 DJ-1/PfpI family HHJ45_09905 PF00267 Gram-negative porin HHJ45_09915 PF01966 HD domain HHJ45_09920 PF00145 C-5 cytosine-specific DNA methylase HHJ45_09920 PF18284 DNA methylase N-terminal domain HHJ45_09925 PF03852 DNA mismatch endonuclease Vsr HHJ45_09930 PF00892 EamA-like transporter family HHJ45_09935 PF05661 Protein of unknown function (DUF808) HHJ45_09940 PF09926 Uncharacterized small protein (DUF2158) HHJ45_09945 PF17151 Periplasmic sensor domain HHJ45_09945 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_09955 PF10733 Protein of unknown function (DUF2525) HHJ45_09960 PF10781 Dextransucrase DSRB HHJ45_09965 PF00196 Bacterial regulatory proteins, luxR family HHJ45_09970 PF01311 Bacterial export proteins, family 1 HHJ45_09975 PF01313 Bacterial export proteins, family 3 HHJ45_09980 PF00813 FliP family HHJ45_09985 PF04347 Flagellar biosynthesis protein, FliO HHJ45_09990 PF16973 Flagellar motor switch protein FliN N-terminal HHJ45_09990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HHJ45_09995 PF02154 Flagellar motor switch protein FliM HHJ45_09995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HHJ45_10000 PF03748 Flagellar basal body-associated protein FliL HHJ45_10005 PF02120 Flagellar hook-length control protein FliK HHJ45_10010 PF02050 Flagellar FliJ protein HHJ45_10015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HHJ45_10015 PF18269 T3SS EscN ATPase C-terminal domain HHJ45_10025 PF02108 Flagellar assembly protein FliH HHJ45_10030 PF01706 FliG C-terminal domain HHJ45_10030 PF14841 FliG middle domain HHJ45_10030 PF14842 FliG N-terminal domain HHJ45_10035 PF01514 Secretory protein of YscJ/FliF family HHJ45_10035 PF08345 Flagellar M-ring protein C-terminal HHJ45_10040 PF02049 Flagellar hook-basal body complex protein FliE HHJ45_10045 PF02586 SOS response associated peptidase (SRAP) HHJ45_10050 PF01206 Sulfurtransferase TusA HHJ45_10055 PF04143 Sulphur transport HHJ45_10060 PF13987 YedD-like protein HHJ45_10065 PF02806 Alpha amylase, C-terminal all-beta domain HHJ45_10065 PF00128 Alpha amylase, catalytic domain HHJ45_10070 PF05400 Flagellar protein FliT HHJ45_10075 PF02561 Flagellar protein FliS HHJ45_10080 PF07195 Flagellar hook-associated protein 2 C-terminus HHJ45_10080 PF02465 Flagellar hook-associated protein 2 N-terminus HHJ45_10085 PF00669 Bacterial flagellin N-terminal helical region HHJ45_10085 PF08884 Flagellin D3 domain HHJ45_10085 PF00700 Bacterial flagellin C-terminal helical region HHJ45_10090 PF04542 Sigma-70 region 2 HHJ45_10090 PF04545 Sigma-70, region 4 HHJ45_10090 PF04539 Sigma-70 region 3 HHJ45_10095 PF02899 Phage integrase, N-terminal SAM-like domain HHJ45_10105 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_10120 PF00196 Bacterial regulatory proteins, luxR family HHJ45_10120 PF03472 Autoinducer binding domain HHJ45_10125 PF10769 Protein of unknown function (DUF2594) HHJ45_10135 PF00196 Bacterial regulatory proteins, luxR family HHJ45_10135 PF00072 Response regulator receiver domain HHJ45_10140 PF01541 GIY-YIG catalytic domain HHJ45_10140 PF02151 UvrB/uvrC motif HHJ45_10140 PF08459 UvrC Helix-hairpin-helix N-terminal HHJ45_10145 PF01066 CDP-alcohol phosphatidyltransferase HHJ45_10165 PF03695 Uncharacterised protein family (UPF0149) HHJ45_10165 PF02810 SEC-C motif HHJ45_10170 PF03222 Tryptophan/tyrosine permease family HHJ45_10175 PF10678 Protein of unknown function (DUF2492) HHJ45_10180 PF00210 Ferritin-like domain HHJ45_10185 PF13992 YecR-like lipoprotein HHJ45_10195 PF10964 Protein of unknown function (DUF2766) HHJ45_10200 PF00210 Ferritin-like domain HHJ45_10205 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ45_10210 PF00005 ABC transporter HHJ45_10215 PF02653 Branched-chain amino acid transport system / permease component HHJ45_10220 PF02358 Trehalose-phosphatase HHJ45_10225 PF00982 Glycosyltransferase family 20 HHJ45_10230 PF00582 Universal stress protein family HHJ45_10235 PF05247 Flagellar transcriptional activator (FlhD) HHJ45_10240 PF05280 Flagellar transcriptional activator (FlhC) HHJ45_10245 PF01618 MotA/TolQ/ExbB proton channel family HHJ45_10250 PF00691 OmpA family HHJ45_10250 PF13677 Membrane MotB of proton-channel complex MotA/MotB HHJ45_10255 PF01627 Hpt domain HHJ45_10255 PF09078 CheY binding HHJ45_10255 PF01584 CheW-like domain HHJ45_10255 PF02895 Signal transducing histidine kinase, homodimeric domain HHJ45_10255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_10260 PF01584 CheW-like domain HHJ45_10265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HHJ45_10265 PF02203 Tar ligand binding domain homologue HHJ45_10265 PF00672 HAMP domain HHJ45_10270 PF02203 Tar ligand binding domain homologue HHJ45_10270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HHJ45_10270 PF00672 HAMP domain HHJ45_10275 PF01739 CheR methyltransferase, SAM binding domain HHJ45_10275 PF03705 CheR methyltransferase, all-alpha domain HHJ45_10280 PF01339 CheB methylesterase HHJ45_10280 PF00072 Response regulator receiver domain HHJ45_10285 PF00072 Response regulator receiver domain HHJ45_10290 PF04344 Chemotaxis phosphatase, CheZ HHJ45_10295 PF01312 FlhB HrpN YscU SpaS Family HHJ45_10300 PF00771 FHIPEP family HHJ45_10305 PF06366 Flagellar protein FlhE HHJ45_10310 PF07007 Lysozyme inhibitor LprI HHJ45_10315 PF03485 Arginyl tRNA synthetase N terminal domain HHJ45_10315 PF05746 DALR anticodon binding domain HHJ45_10315 PF00750 tRNA synthetases class I (R) HHJ45_10320 PF06185 YecM protein HHJ45_10325 PF03932 CutC family HHJ45_10330 PF03264 NapC/NirT cytochrome c family, N-terminal region HHJ45_10345 PF08003 Protein of unknown function (DUF1698) HHJ45_10350 PF13649 Methyltransferase domain HHJ45_10355 PF01124 MAPEG family HHJ45_10360 PF01904 Protein of unknown function DUF72 HHJ45_10365 PF00857 Isochorismatase family HHJ45_10370 PF01336 OB-fold nucleic acid binding domain HHJ45_10370 PF02938 GAD domain HHJ45_10370 PF00152 tRNA synthetases class II (D, K and N) HHJ45_10375 PF00293 NUDIX domain HHJ45_10380 PF01709 Transcriptional regulator HHJ45_10385 PF02075 Crossover junction endodeoxyribonuclease RuvC HHJ45_10390 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HHJ45_10395 PF07499 RuvA, C-terminal domain HHJ45_10395 PF01330 RuvA N terminal domain HHJ45_10400 PF05491 RuvB C-terminal winged helix domain HHJ45_10400 PF17864 RuvB AAA lid domain HHJ45_10400 PF05496 Holliday junction DNA helicase RuvB P-loop domain HHJ45_10405 PF00950 ABC 3 transport family HHJ45_10410 PF00005 ABC transporter HHJ45_10415 PF01297 Zinc-uptake complex component A periplasmic HHJ45_10420 PF08525 Opacity-associated protein A N-terminal motif HHJ45_10420 PF01476 LysM domain HHJ45_10420 PF01551 Peptidase family M23 HHJ45_10425 PF03279 Bacterial lipid A biosynthesis acyltransferase HHJ45_10430 PF00224 Pyruvate kinase, barrel domain HHJ45_10430 PF02887 Pyruvate kinase, alpha/beta domain HHJ45_10435 PF01418 Helix-turn-helix domain, rpiR family HHJ45_10435 PF01380 SIS domain HHJ45_10440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HHJ45_10440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HHJ45_10445 PF00920 Dehydratase family HHJ45_10450 PF01081 KDPG and KHG aldolase HHJ45_10455 PF02222 ATP-grasp domain HHJ45_10460 PF07130 YebG protein HHJ45_10465 PF13995 YebF-like protein HHJ45_10470 PF04391 Protein of unknown function (DUF533) HHJ45_10475 PF00326 Prolyl oligopeptidase family HHJ45_10475 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HHJ45_10480 PF00929 Exonuclease HHJ45_10485 PF00795 Carbon-nitrogen hydrolase HHJ45_10490 PF06440 DNA polymerase III, theta subunit HHJ45_10495 PF04234 CopC domain HHJ45_10500 PF05425 Copper resistance protein D HHJ45_10505 PF10709 Protein of unknown function (DUF2511) HHJ45_10510 PF00149 Calcineurin-like phosphoesterase HHJ45_10515 PF07358 Protein of unknown function (DUF1482) HHJ45_10520 PF07351 Protein of unknown function (DUF1480) HHJ45_10525 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HHJ45_10525 PF01189 16S rRNA methyltransferase RsmB/F HHJ45_10525 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HHJ45_10530 PF02470 MlaD protein HHJ45_10535 PF04403 Paraquat-inducible protein A HHJ45_10540 PF13185 GAF domain HHJ45_10545 PF17516 ProQ C-terminal domain HHJ45_10545 PF04352 ProQ/FINO family HHJ45_10550 PF17804 Tail specific protease N-terminal domain HHJ45_10550 PF11818 C-terminal domain of tail specific protease (DUF3340) HHJ45_10550 PF00595 PDZ domain HHJ45_10550 PF03572 Peptidase family S41 HHJ45_10555 PF01435 Peptidase family M48 HHJ45_10560 PF07690 Major Facilitator Superfamily HHJ45_10565 PF01614 Bacterial transcriptional regulator HHJ45_10565 PF09339 IclR helix-turn-helix domain HHJ45_10570 PF13996 YobH-like protein HHJ45_10575 PF13998 MgrB protein HHJ45_10580 PF13974 YebO-like protein HHJ45_10585 PF10736 Protein of unknown function (DUF2627) HHJ45_10590 PF00313 'Cold-shock' DNA-binding domain HHJ45_10595 PF13847 Methyltransferase domain HHJ45_10600 PF02659 Putative manganese efflux pump HHJ45_10605 PF06173 Protein of unknown function (DUF986) HHJ45_10610 PF03613 PTS system mannose/fructose/sorbose family IID component HHJ45_10615 PF03609 PTS system sorbose-specific iic component HHJ45_10620 PF03610 PTS system fructose IIA component HHJ45_10620 PF03830 PTS system sorbose subfamily IIB component HHJ45_10625 PF03471 Transporter associated domain HHJ45_10625 PF03741 Integral membrane protein TerC family HHJ45_10630 PF12792 CSS motif domain associated with EAL HHJ45_10630 PF00563 EAL domain HHJ45_10635 PF03313 Serine dehydratase alpha chain HHJ45_10635 PF03315 Serine dehydratase beta chain HHJ45_10640 PF00293 NUDIX domain HHJ45_10645 PF00425 chorismate binding enzyme HHJ45_10645 PF04715 Anthranilate synthase component I, N terminal region HHJ45_10650 PF03701 Uncharacterised protein family (UPF0181) HHJ45_10655 PF08986 Domain of unknown function (DUF1889) HHJ45_10665 PF01042 Endoribonuclease L-PSP HHJ45_10670 PF13307 Helicase C-terminal domain HHJ45_10670 PF04851 Type III restriction enzyme, res subunit HHJ45_10675 PF00814 Glycoprotease family HHJ45_10680 PF03843 Outer membrane lipoprotein Slp family HHJ45_10685 PF13193 AMP-binding enzyme C-terminal domain HHJ45_10685 PF00501 AMP-binding enzyme HHJ45_10690 PF01612 3'-5' exonuclease HHJ45_10690 PF00570 HRDC domain HHJ45_10695 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_10695 PF00970 Oxidoreductase FAD-binding domain HHJ45_10695 PF00175 Oxidoreductase NAD-binding domain HHJ45_10700 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HHJ45_10700 PF00355 Rieske [2Fe-2S] domain HHJ45_10705 PF02028 BCCT, betaine/carnitine/choline family transporter HHJ45_10710 PF00180 Isocitrate/isopropylmalate dehydrogenase HHJ45_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_10715 PF03466 LysR substrate binding domain HHJ45_10720 PF01810 LysE type translocator HHJ45_10735 PF04226 Transglycosylase associated protein HHJ45_10750 PF13185 GAF domain HHJ45_10750 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_10755 PF03891 Domain of unknown function (DUF333) HHJ45_10760 PF04343 Protein of unknown function, DUF488 HHJ45_10770 PF12833 Helix-turn-helix domain HHJ45_10770 PF02311 AraC-like ligand binding domain HHJ45_10775 PF04284 Protein of unknown function (DUF441) HHJ45_10785 PF04073 Aminoacyl-tRNA editing domain HHJ45_10790 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_10790 PF17155 Gammaproteobacterial periplasmic sensor domain HHJ45_10800 PF04285 Protein of unknown function (DUF444) HHJ45_10805 PF08298 PrkA AAA domain HHJ45_10805 PF06798 PrkA serine protein kinase C-terminal domain HHJ45_10810 PF06629 MltA-interacting protein MipA HHJ45_10815 PF00248 Aldo/keto reductase family HHJ45_10820 PF01263 Aldose 1-epimerase HHJ45_10825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HHJ45_10825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HHJ45_10830 PF01641 SelR domain HHJ45_10835 PF07023 Protein of unknown function (DUF1315) HHJ45_10840 PF00857 Isochorismatase family HHJ45_10845 PF17763 Glutaminase/Asparaginase C-terminal domain HHJ45_10845 PF00710 Asparaginase, N-terminal HHJ45_10850 PF01343 Peptidase family S49 HHJ45_10855 PF00881 Nitroreductase family HHJ45_10860 PF00586 AIR synthase related protein, N-terminal domain HHJ45_10860 PF02769 AIR synthase related protein, C-terminal domain HHJ45_10865 PF01751 Toprim domain HHJ45_10865 PF01131 DNA topoisomerase HHJ45_10875 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HHJ45_10875 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HHJ45_10880 PF07383 Protein of unknown function (DUF1496) HHJ45_10885 PF00293 NUDIX domain HHJ45_10890 PF01066 CDP-alcohol phosphatidyltransferase HHJ45_10895 PF00581 Rhodanese-like domain HHJ45_10900 PF00005 ABC transporter HHJ45_10905 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_10910 PF13416 Bacterial extracellular solute-binding protein HHJ45_10915 PF02627 Carboxymuconolactone decarboxylase family HHJ45_10920 PF09335 SNARE associated Golgi protein HHJ45_10930 PF09335 SNARE associated Golgi protein HHJ45_10935 PF03372 Endonuclease/Exonuclease/phosphatase family HHJ45_10940 PF00202 Aminotransferase class-III HHJ45_10945 PF04958 Arginine N-succinyltransferase beta subunit HHJ45_10950 PF00171 Aldehyde dehydrogenase family HHJ45_10955 PF04996 Succinylarginine dihydrolase HHJ45_10960 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HHJ45_10965 PF07813 LTXXQ motif family protein HHJ45_10970 PF05962 HutD HHJ45_10980 PF02540 NAD synthase HHJ45_10985 PF04355 SmpA / OmlA family HHJ45_10990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_10995 PF02378 Phosphotransferase system, EIIC HHJ45_11000 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HHJ45_11005 PF12833 Helix-turn-helix domain HHJ45_11005 PF07883 Cupin domain HHJ45_11010 PF02056 Family 4 glycosyl hydrolase HHJ45_11010 PF11975 Family 4 glycosyl hydrolase C-terminal domain HHJ45_11015 PF04794 YdjC-like protein HHJ45_11020 PF00199 Catalase HHJ45_11020 PF06628 Catalase-related immune-responsive HHJ45_11020 PF18011 C-terminal domain found in long catalases HHJ45_11025 PF10729 Cell division activator CedA HHJ45_11045 PF04307 LexA-binding, inner membrane-associated putative hydrolase HHJ45_11050 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_11055 PF14002 YniB-like protein HHJ45_11060 PF03881 Fructosamine kinase HHJ45_11065 PF11080 Endoribonuclease GhoS HHJ45_11070 PF00294 pfkB family carbohydrate kinase HHJ45_11075 PF04338 Protein of unknown function, DUF481 HHJ45_11090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HHJ45_11090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HHJ45_11090 PF03129 Anticodon binding domain HHJ45_11090 PF02824 TGS domain HHJ45_11095 PF00707 Translation initiation factor IF-3, C-terminal domain HHJ45_11095 PF05198 Translation initiation factor IF-3, N-terminal domain HHJ45_11100 PF01632 Ribosomal protein L35 HHJ45_11105 PF00453 Ribosomal protein L20 HHJ45_11115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HHJ45_11115 PF01409 tRNA synthetases class II core domain (F) HHJ45_11120 PF03483 B3/4 domain HHJ45_11120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HHJ45_11120 PF01588 Putative tRNA binding domain HHJ45_11120 PF03147 Ferredoxin-fold anticodon binding domain HHJ45_11120 PF03484 tRNA synthetase B5 domain HHJ45_11125 PF00216 Bacterial DNA-binding protein HHJ45_11130 PF01032 FecCD transport family HHJ45_11135 PF00255 Glutathione peroxidase HHJ45_11140 PF00005 ABC transporter HHJ45_11145 PF00877 NlpC/P60 family HHJ45_11150 PF00563 EAL domain HHJ45_11155 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HHJ45_11160 PF10636 Hemin uptake protein hemP HHJ45_11165 PF00793 DAHP synthetase I family HHJ45_11170 PF03618 Kinase/pyrophosphorylase HHJ45_11175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HHJ45_11175 PF02896 PEP-utilising enzyme, TIM barrel domain HHJ45_11175 PF00391 PEP-utilising enzyme, mobile domain HHJ45_11180 PF00501 AMP-binding enzyme HHJ45_11180 PF13193 AMP-binding enzyme C-terminal domain HHJ45_11190 PF01494 FAD binding domain HHJ45_11195 PF00766 Electron transfer flavoprotein FAD-binding domain HHJ45_11195 PF01012 Electron transfer flavoprotein domain HHJ45_11200 PF01012 Electron transfer flavoprotein domain HHJ45_11205 PF02311 AraC-like ligand binding domain HHJ45_11205 PF12833 Helix-turn-helix domain HHJ45_11210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HHJ45_11210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HHJ45_11210 PF02770 Acyl-CoA dehydrogenase, middle domain HHJ45_11215 PF01144 Coenzyme A transferase HHJ45_11220 PF01487 Type I 3-dehydroquinase HHJ45_11225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HHJ45_11225 PF08501 Shikimate dehydrogenase substrate binding domain HHJ45_11230 PF07690 Major Facilitator Superfamily HHJ45_11235 PF07690 Major Facilitator Superfamily HHJ45_11240 PF08965 Domain of unknown function (DUF1870) HHJ45_11250 PF01594 AI-2E family transporter HHJ45_11255 PF02913 FAD linked oxidases, C-terminal domain HHJ45_11255 PF01565 FAD binding domain HHJ45_11255 PF13183 4Fe-4S dicluster domain HHJ45_11260 PF03061 Thioesterase superfamily HHJ45_11265 PF15930 Domain of unknown function HHJ45_11270 PF01521 Iron-sulphur cluster biosynthesis HHJ45_11275 PF01458 Uncharacterized protein family (UPF0051) HHJ45_11280 PF00005 ABC transporter HHJ45_11285 PF01458 Uncharacterized protein family (UPF0051) HHJ45_11290 PF00266 Aminotransferase class-V HHJ45_11295 PF02657 Fe-S metabolism associated domain HHJ45_11300 PF03734 L,D-transpeptidase catalytic domain HHJ45_11300 PF17969 L,D-transpeptidase C-terminal domain HHJ45_11300 PF01476 LysM domain HHJ45_11305 PF04728 Lipoprotein leucine-zipper HHJ45_11310 PF00224 Pyruvate kinase, barrel domain HHJ45_11310 PF02887 Pyruvate kinase, alpha/beta domain HHJ45_11315 PF10965 Protein of unknown function (DUF2767) HHJ45_11325 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain HHJ45_11325 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 HHJ45_11335 PF13247 4Fe-4S dicluster domain HHJ45_11340 PF01292 Prokaryotic cytochrome b561 HHJ45_11350 PF13454 FAD-NAD(P)-binding HHJ45_11355 PF08803 Putative mono-oxygenase ydhR HHJ45_11370 PF16168 Adhesin of bacterial autotransporter system, probable stalk HHJ45_11370 PF03212 Pertactin HHJ45_11375 PF01554 MatE HHJ45_11380 PF00677 Lumazine binding domain HHJ45_11390 PF07690 Major Facilitator Superfamily HHJ45_11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_11395 PF03466 LysR substrate binding domain HHJ45_11400 PF00356 Bacterial regulatory proteins, lacI family HHJ45_11410 PF07690 Major Facilitator Superfamily HHJ45_11415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HHJ45_11415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HHJ45_11420 PF00877 NlpC/P60 family HHJ45_11425 PF00462 Glutaredoxin HHJ45_11430 PF00270 DEAD/DEAH box helicase HHJ45_11430 PF00271 Helicase conserved C-terminal domain HHJ45_11430 PF08494 DEAD/H associated HHJ45_11435 PF00929 Exonuclease HHJ45_11440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HHJ45_11445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HHJ45_11450 PF00440 Bacterial regulatory proteins, tetR family HHJ45_11450 PF16925 Tetracyclin repressor-like, C-terminal domain HHJ45_11455 PF06945 Protein of unknown function (DUF1289) HHJ45_11460 PF00248 Aldo/keto reductase family HHJ45_11465 PF00080 Copper/zinc superoxide dismutase (SODC) HHJ45_11470 PF04632 Fusaric acid resistance protein family HHJ45_11475 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_11475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_11480 PF07869 Protein of unknown function (DUF1656) HHJ45_11485 PF01047 MarR family HHJ45_11490 PF05433 Glycine zipper 2TM domain HHJ45_11495 PF03702 Anhydro-N-acetylmuramic acid kinase HHJ45_11500 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HHJ45_11505 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HHJ45_11505 PF01243 Pyridoxamine 5'-phosphate oxidase HHJ45_11510 PF01479 S4 domain HHJ45_11510 PF00579 tRNA synthetases class I (W and Y) HHJ45_11515 PF08543 Phosphomethylpyrimidine kinase HHJ45_11520 PF00043 Glutathione S-transferase, C-terminal domain HHJ45_11520 PF02798 Glutathione S-transferase, N-terminal domain HHJ45_11525 PF00854 POT family HHJ45_11530 PF10576 Iron-sulfur binding domain of endonuclease III HHJ45_11530 PF00633 Helix-hairpin-helix motif HHJ45_11530 PF00730 HhH-GPD superfamily base excision DNA repair protein HHJ45_11535 PF02508 Rnf-Nqr subunit, membrane protein HHJ45_11540 PF04205 FMN-binding domain HHJ45_11545 PF03116 NQR2, RnfD, RnfE family HHJ45_11550 PF10531 SLBB domain HHJ45_11550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HHJ45_11550 PF12838 4Fe-4S dicluster domain HHJ45_11550 PF13375 RnfC Barrel sandwich hybrid domain HHJ45_11555 PF04060 Putative Fe-S cluster HHJ45_11560 PF02508 Rnf-Nqr subunit, membrane protein HHJ45_11565 PF10754 Protein of unknown function (DUF2569) HHJ45_11570 PF05321 Haemolysin expression modulating protein HHJ45_11580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ45_11580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ45_11585 PF00962 Adenosine/AMP deaminase HHJ45_11590 PF00155 Aminotransferase class I and II HHJ45_11595 PF02378 Phosphotransferase system, EIIC HHJ45_11595 PF00367 phosphotransferase system, EIIB HHJ45_11600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ45_11600 PF00356 Bacterial regulatory proteins, lacI family HHJ45_11610 PF00440 Bacterial regulatory proteins, tetR family HHJ45_11615 PF02837 Glycosyl hydrolases family 2, sugar binding domain HHJ45_11615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HHJ45_11615 PF00703 Glycosyl hydrolases family 2 HHJ45_11625 PF03573 outer membrane porin, OprD family HHJ45_11630 PF06097 Bacterial protein of unknown function (DUF945) HHJ45_11635 PF01238 Phosphomannose isomerase type I HHJ45_11640 PF05681 Fumarate hydratase (Fumerase) HHJ45_11640 PF05683 Fumarase C-terminus HHJ45_11645 PF10415 Fumarase C C-terminus HHJ45_11645 PF00206 Lyase HHJ45_11650 PF05472 DNA replication terminus site-binding protein (Ter protein) HHJ45_11655 PF00672 HAMP domain HHJ45_11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_11655 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_11660 PF00072 Response regulator receiver domain HHJ45_11660 PF00486 Transcriptional regulatory protein, C terminal HHJ45_11665 PF06942 GlpM protein HHJ45_11675 PF13520 Amino acid permease HHJ45_11680 PF07338 Protein of unknown function (DUF1471) HHJ45_11685 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HHJ45_11685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HHJ45_11685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HHJ45_11690 PF02233 NAD(P) transhydrogenase beta subunit HHJ45_11695 PF01594 AI-2E family transporter HHJ45_11700 PF00893 Small Multidrug Resistance protein HHJ45_11705 PF00893 Small Multidrug Resistance protein HHJ45_11710 PF00089 Trypsin HHJ45_11725 PF07690 Major Facilitator Superfamily HHJ45_11730 PF03466 LysR substrate binding domain HHJ45_11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_11735 PF00480 ROK family HHJ45_11745 PF00654 Voltage gated chloride channel HHJ45_11750 PF02613 Nitrate reductase delta subunit HHJ45_11755 PF04976 DMSO reductase anchor subunit (DmsC) HHJ45_11760 PF13247 4Fe-4S dicluster domain HHJ45_11760 PF12800 4Fe-4S binding domain HHJ45_11765 PF00384 Molybdopterin oxidoreductase HHJ45_11765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HHJ45_11765 PF01568 Molydopterin dinucleotide binding domain HHJ45_11770 PF01568 Molydopterin dinucleotide binding domain HHJ45_11770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HHJ45_11770 PF00384 Molybdopterin oxidoreductase HHJ45_11775 PF06649 Protein of unknown function (DUF1161) HHJ45_11780 PF06788 Uncharacterised protein family (UPF0257) HHJ45_11785 PF13302 Acetyltransferase (GNAT) domain HHJ45_11790 PF06932 Protein of unknown function (DUF1283) HHJ45_11795 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HHJ45_11800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HHJ45_11800 PF13378 Enolase C-terminal domain-like HHJ45_11805 PF00107 Zinc-binding dehydrogenase HHJ45_11805 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_11830 PF14001 YdfZ protein HHJ45_11835 PF07729 FCD domain HHJ45_11835 PF00392 Bacterial regulatory proteins, gntR family HHJ45_11840 PF00106 short chain dehydrogenase HHJ45_11845 PF01432 Peptidase family M3 HHJ45_11850 PF02464 Competence-damaged protein HHJ45_11855 PF04076 Bacterial OB fold (BOF) protein HHJ45_11860 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_11870 PF07690 Major Facilitator Superfamily HHJ45_11875 PF00892 EamA-like transporter family HHJ45_11880 PF00392 Bacterial regulatory proteins, gntR family HHJ45_11880 PF07702 UTRA domain HHJ45_11885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_11890 PF02378 Phosphotransferase system, EIIC HHJ45_11895 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HHJ45_11900 PF02264 LamB porin HHJ45_11900 PF11471 Maltoporin periplasmic N-terminal extension HHJ45_11905 PF00232 Glycosyl hydrolase family 1 HHJ45_11910 PF13999 MarB protein HHJ45_11915 PF12833 Helix-turn-helix domain HHJ45_11920 PF01047 MarR family HHJ45_11925 PF01914 MarC family integral membrane protein HHJ45_11930 PF07690 Major Facilitator Superfamily HHJ45_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_11940 PF03466 LysR substrate binding domain HHJ45_11945 PF00171 Aldehyde dehydrogenase family HHJ45_11950 PF04960 Glutaminase HHJ45_11955 PF13811 Domain of unknown function (DUF4186) HHJ45_11960 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_11965 PF01232 Mannitol dehydrogenase Rossmann domain HHJ45_11965 PF08125 Mannitol dehydrogenase C-terminal domain HHJ45_11970 PF01062 Bestrophin, RFP-TM, chloride channel HHJ45_11975 PF13649 Methyltransferase domain HHJ45_11980 PF03992 Antibiotic biosynthesis monooxygenase HHJ45_11985 PF01791 DeoC/LacD family aldolase HHJ45_11990 PF13407 Periplasmic binding protein domain HHJ45_11995 PF02653 Branched-chain amino acid transport system / permease component HHJ45_12000 PF02653 Branched-chain amino acid transport system / permease component HHJ45_12005 PF00005 ABC transporter HHJ45_12010 PF04198 Putative sugar-binding domain HHJ45_12015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ45_12015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_12020 PF13018 Extended Signal Peptide of Type V secretion system HHJ45_12025 PF01381 Helix-turn-helix HHJ45_12030 PF07804 HipA-like C-terminal domain HHJ45_12030 PF13657 HipA N-terminal domain HHJ45_12040 PF00419 Fimbrial protein HHJ45_12045 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_12045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_12050 PF13953 PapC C-terminal domain HHJ45_12050 PF13954 PapC N-terminal domain HHJ45_12050 PF00577 Outer membrane usher protein HHJ45_12055 PF00419 Fimbrial protein HHJ45_12060 PF00419 Fimbrial protein HHJ45_12065 PF09160 FimH, mannose binding HHJ45_12070 PF00384 Molybdopterin oxidoreductase HHJ45_12075 PF17073 Two-component-system connector protein HHJ45_12085 PF00884 Sulfatase HHJ45_12090 PF13186 Iron-sulfur cluster-binding domain HHJ45_12090 PF04055 Radical SAM superfamily HHJ45_12100 PF06472 ABC transporter transmembrane region 2 HHJ45_12100 PF00005 ABC transporter HHJ45_12105 PF07715 TonB-dependent Receptor Plug Domain HHJ45_12110 PF00675 Insulinase (Peptidase family M16) HHJ45_12110 PF05193 Peptidase M16 inactive domain HHJ45_12115 PF00282 Pyridoxal-dependent decarboxylase conserved domain HHJ45_12120 PF13520 Amino acid permease HHJ45_12130 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_12135 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_12135 PF13426 PAS domain HHJ45_12135 PF00563 EAL domain HHJ45_12140 PF01427 D-ala-D-ala dipeptidase HHJ45_12145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_12150 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12155 PF12911 N-terminal TM domain of oligopeptide transport permease C HHJ45_12155 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12160 PF00005 ABC transporter HHJ45_12160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_12165 PF00005 ABC transporter HHJ45_12165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_12170 PF02566 OsmC-like protein HHJ45_12175 PF10684 Putative biofilm-dependent modulation protein HHJ45_12180 PF08136 30S ribosomal protein subunit S22 family HHJ45_12185 PF00390 Malic enzyme, N-terminal domain HHJ45_12185 PF03949 Malic enzyme, NAD binding domain HHJ45_12190 PF00107 Zinc-binding dehydrogenase HHJ45_12190 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_12195 PF01381 Helix-turn-helix HHJ45_12200 PF01292 Prokaryotic cytochrome b561 HHJ45_12205 PF09163 Formate dehydrogenase N, transmembrane HHJ45_12205 PF13247 4Fe-4S dicluster domain HHJ45_12205 PF12800 4Fe-4S binding domain HHJ45_12215 PF00892 EamA-like transporter family HHJ45_12220 PF00267 Gram-negative porin HHJ45_12230 PF07690 Major Facilitator Superfamily HHJ45_12235 PF00384 Molybdopterin oxidoreductase HHJ45_12235 PF01568 Molydopterin dinucleotide binding domain HHJ45_12235 PF14710 Respiratory nitrate reductase alpha N-terminal HHJ45_12240 PF14711 Respiratory nitrate reductase beta C-terminal HHJ45_12240 PF13247 4Fe-4S dicluster domain HHJ45_12245 PF02613 Nitrate reductase delta subunit HHJ45_12250 PF02665 Nitrate reductase gamma subunit HHJ45_12255 PF02567 Phenazine biosynthesis-like protein HHJ45_12260 PF00797 N-acetyltransferase HHJ45_12265 PF01613 Flavin reductase like domain HHJ45_12270 PF01361 Tautomerase enzyme HHJ45_12285 PF14220 Domain of unknown function (DUF4329) HHJ45_12285 PF05593 RHS Repeat HHJ45_12285 PF03527 RHS protein HHJ45_12315 PF14220 Domain of unknown function (DUF4329) HHJ45_12315 PF03527 RHS protein HHJ45_12315 PF05593 RHS Repeat HHJ45_12335 PF00324 Amino acid permease HHJ45_12345 PF00593 TonB dependent receptor HHJ45_12345 PF07715 TonB-dependent Receptor Plug Domain HHJ45_12350 PF00392 Bacterial regulatory proteins, gntR family HHJ45_12350 PF07729 FCD domain HHJ45_12355 PF00107 Zinc-binding dehydrogenase HHJ45_12355 PF16884 N-terminal domain of oxidoreductase HHJ45_12360 PF00583 Acetyltransferase (GNAT) family HHJ45_12365 PF04657 Putative inner membrane exporter, YdcZ HHJ45_12370 PF10735 Protein of unknown function (DUF2526) HHJ45_12375 PF10753 Toxin GhoT_OrtT HHJ45_12385 PF00171 Aldehyde dehydrogenase family HHJ45_12390 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12395 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12415 PF13416 Bacterial extracellular solute-binding protein HHJ45_12420 PF00392 Bacterial regulatory proteins, gntR family HHJ45_12420 PF00155 Aminotransferase class I and II HHJ45_12425 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HHJ45_12425 PF01381 Helix-turn-helix HHJ45_12430 PF07927 HicA toxin of bacterial toxin-antitoxin, HHJ45_12435 PF10829 Protein of unknown function (DUF2554) HHJ45_12440 PF01136 Peptidase family U32 HHJ45_12440 PF12392 Collagenase HHJ45_12445 PF01381 Helix-turn-helix HHJ45_12445 PF07883 Cupin domain HHJ45_12450 PF03594 Benzoate membrane transport protein HHJ45_12455 PF07282 Putative transposase DNA-binding domain HHJ45_12455 PF12323 Helix-turn-helix domain HHJ45_12455 PF01385 Probable transposase HHJ45_12465 PF11769 Protein of unknown function (DUF3313) HHJ45_12470 PF03848 Tellurite resistance protein TehB HHJ45_12475 PF03595 Voltage-dependent anion channel HHJ45_12480 PF18836 Beta solenoid repeat from YDCK HHJ45_12485 PF13302 Acetyltransferase (GNAT) domain HHJ45_12490 PF04325 Protein of unknown function (DUF465) HHJ45_12495 PF04349 Periplasmic glucan biosynthesis protein, MdoG HHJ45_12500 PF07063 Domain of unknown function (DUF1338) HHJ45_12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_12505 PF03466 LysR substrate binding domain HHJ45_12510 PF00672 HAMP domain HHJ45_12510 PF02203 Tar ligand binding domain homologue HHJ45_12510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HHJ45_12515 PF01848 Hok/gef family HHJ45_12525 PF01292 Prokaryotic cytochrome b561 HHJ45_12530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HHJ45_12530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HHJ45_12535 PF00171 Aldehyde dehydrogenase family HHJ45_12540 PF02698 DUF218 domain HHJ45_12545 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HHJ45_12545 PF00270 DEAD/DEAH box helicase HHJ45_12545 PF00271 Helicase conserved C-terminal domain HHJ45_12545 PF04408 Helicase associated domain (HA2) HHJ45_12545 PF11898 Domain of unknown function (DUF3418) HHJ45_12550 PF02525 Flavodoxin-like fold HHJ45_12555 PF00782 Dual specificity phosphatase, catalytic domain HHJ45_12560 PF12147 Putative methyltransferase HHJ45_12560 PF12146 Serine aminopeptidase, S33 HHJ45_12570 PF01066 CDP-alcohol phosphatidyltransferase HHJ45_12580 PF00248 Aldo/keto reductase family HHJ45_12585 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_12590 PF07848 PaaX-like protein HHJ45_12590 PF08223 PaaX-like protein C-terminal domain HHJ45_12595 PF14535 AMP-binding enzyme C-terminal domain HHJ45_12595 PF00501 AMP-binding enzyme HHJ45_12600 PF00108 Thiolase, N-terminal domain HHJ45_12600 PF02803 Thiolase, C-terminal domain HHJ45_12605 PF03061 Thioesterase superfamily HHJ45_12610 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HHJ45_12610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HHJ45_12610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HHJ45_12615 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_12620 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_12625 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_12625 PF00970 Oxidoreductase FAD-binding domain HHJ45_12625 PF00175 Oxidoreductase NAD-binding domain HHJ45_12630 PF01883 Iron-sulfur cluster assembly protein HHJ45_12635 PF05138 Phenylacetic acid catabolic protein HHJ45_12640 PF06243 Phenylacetic acid degradation B HHJ45_12645 PF05138 Phenylacetic acid catabolic protein HHJ45_12650 PF01575 MaoC like domain HHJ45_12650 PF00171 Aldehyde dehydrogenase family HHJ45_12655 PF02727 Copper amine oxidase, N2 domain HHJ45_12655 PF02728 Copper amine oxidase, N3 domain HHJ45_12655 PF01179 Copper amine oxidase, enzyme domain HHJ45_12655 PF07833 Copper amine oxidase N-terminal domain HHJ45_12660 PF00171 Aldehyde dehydrogenase family HHJ45_12665 PF14525 AraC-binding-like domain HHJ45_12665 PF12833 Helix-turn-helix domain HHJ45_12670 PF07027 Protein of unknown function (DUF1318) HHJ45_12675 PF13617 YnbE-like lipoprotein HHJ45_12680 PF11739 Dicarboxylate transport HHJ45_12685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HHJ45_12685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ45_12690 PF03724 META domain HHJ45_12695 PF03891 Domain of unknown function (DUF333) HHJ45_12700 PF10371 Domain of unknown function HHJ45_12700 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HHJ45_12700 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HHJ45_12700 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HHJ45_12700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_12710 PF00582 Universal stress protein family HHJ45_12715 PF01171 PP-loop family HHJ45_12720 PF00271 Helicase conserved C-terminal domain HHJ45_12720 PF00270 DEAD/DEAH box helicase HHJ45_12720 PF03880 DbpA RNA binding domain HHJ45_12725 PF01544 CorA-like Mg2+ transporter protein HHJ45_12730 PF08448 PAS fold HHJ45_12730 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_12735 PF01713 Smr domain HHJ45_12740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_12740 PF03466 LysR substrate binding domain HHJ45_12745 PF01546 Peptidase family M20/M25/M40 HHJ45_12745 PF07687 Peptidase dimerisation domain HHJ45_12750 PF01546 Peptidase family M20/M25/M40 HHJ45_12755 PF03806 AbgT putative transporter family HHJ45_12760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HHJ45_12760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HHJ45_12765 PF00027 Cyclic nucleotide-binding domain HHJ45_12765 PF00325 Bacterial regulatory proteins, crp family HHJ45_12770 PF00582 Universal stress protein family HHJ45_12775 PF10749 Protein of unknown function (DUF2534) HHJ45_12780 PF00924 Mechanosensitive ion channel HHJ45_12785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_12790 PF03466 LysR substrate binding domain HHJ45_12795 PF12146 Serine aminopeptidase, S33 HHJ45_12810 PF00246 Zinc carboxypeptidase HHJ45_12815 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HHJ45_12815 PF13378 Enolase C-terminal domain-like HHJ45_12820 PF08534 Redoxin HHJ45_12825 PF00158 Sigma-54 interaction domain HHJ45_12825 PF18024 Helix-turn-helix domain HHJ45_12825 PF13188 PAS domain HHJ45_12830 PF05128 Domain of unknown function (DUF697) HHJ45_12835 PF04317 YcjX-like family, DUF463 HHJ45_12840 PF00356 Bacterial regulatory proteins, lacI family HHJ45_12840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ45_12845 PF09381 Outer membrane protein G (OmpG) HHJ45_12850 PF17912 MalK OB fold domain HHJ45_12850 PF00005 ABC transporter HHJ45_12850 PF03459 TOBE domain HHJ45_12855 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_12860 PF03636 Glycosyl hydrolase family 65, N-terminal domain HHJ45_12860 PF03632 Glycosyl hydrolase family 65 central catalytic domain HHJ45_12860 PF03633 Glycosyl hydrolase family 65, C-terminal domain HHJ45_12865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ45_12865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ45_12870 PF01261 Xylose isomerase-like TIM barrel HHJ45_12875 PF00107 Zinc-binding dehydrogenase HHJ45_12880 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12885 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12890 PF01547 Bacterial extracellular solute-binding protein HHJ45_12895 PF00128 Alpha amylase, catalytic domain HHJ45_12900 PF00581 Rhodanese-like domain HHJ45_12905 PF09584 Phage shock protein PspD (Phageshock_PspD) HHJ45_12910 PF04024 PspC domain HHJ45_12915 PF06667 Phage shock protein B HHJ45_12920 PF04012 PspA/IM30 family HHJ45_12925 PF02954 Bacterial regulatory protein, Fis family HHJ45_12925 PF00158 Sigma-54 interaction domain HHJ45_12930 PF00202 Aminotransferase class-III HHJ45_12935 PF01266 FAD dependent oxidoreductase HHJ45_12940 PF00171 Aldehyde dehydrogenase family HHJ45_12945 PF07883 Cupin domain HHJ45_12945 PF01381 Helix-turn-helix HHJ45_12950 PF07722 Peptidase C26 HHJ45_12955 PF00120 Glutamine synthetase, catalytic domain HHJ45_12965 PF00324 Amino acid permease HHJ45_12970 PF10820 Protein of unknown function (DUF2543) HHJ45_12975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_12980 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12985 PF12911 N-terminal TM domain of oligopeptide transport permease C HHJ45_12985 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_12990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_12990 PF00005 ABC transporter HHJ45_12995 PF00005 ABC transporter HHJ45_13000 PF04480 Protein of unknown function (DUF559) HHJ45_13015 PF00773 RNB domain HHJ45_13015 PF08206 Ribonuclease B OB domain HHJ45_13015 PF00575 S1 RNA binding domain HHJ45_13015 PF17876 Cold shock domain HHJ45_13025 PF00563 EAL domain HHJ45_13025 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_13025 PF13426 PAS domain HHJ45_13035 PF08220 DeoR-like helix-turn-helix domain HHJ45_13035 PF00455 DeoR C terminal sensor domain HHJ45_13040 PF05433 Glycine zipper 2TM domain HHJ45_13045 PF01253 Translation initiation factor SUI1 HHJ45_13050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HHJ45_13055 PF18073 Rubredoxin metal binding domain HHJ45_13060 PF06305 Lipopolysaccharide assembly protein A domain HHJ45_13065 PF01569 PAP2 superfamily HHJ45_13070 PF00925 GTP cyclohydrolase II HHJ45_13075 PF00330 Aconitase family (aconitate hydratase) HHJ45_13075 PF00694 Aconitase C-terminal domain HHJ45_13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_13100 PF03466 LysR substrate binding domain HHJ45_13105 PF01131 DNA topoisomerase HHJ45_13105 PF01751 Toprim domain HHJ45_13105 PF01396 Topoisomerase DNA binding C4 zinc finger HHJ45_13105 PF08272 Topoisomerase I zinc-ribbon-like HHJ45_13110 PF10692 Protein of unknown function (DUF2498) HHJ45_13115 PF08496 Peptidase family S49 N-terminal HHJ45_13115 PF01343 Peptidase family S49 HHJ45_13120 PF00106 short chain dehydrogenase HHJ45_13125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HHJ45_13125 PF12557 Cob(I)alamin adenosyltransferase N terminal HHJ45_13130 PF00849 RNA pseudouridylate synthase HHJ45_13130 PF01479 S4 domain HHJ45_13135 PF01300 Telomere recombination HHJ45_13140 PF02811 PHP domain HHJ45_13145 PF08255 Trp-operon Leader Peptide HHJ45_13150 PF04715 Anthranilate synthase component I, N terminal region HHJ45_13150 PF00425 chorismate binding enzyme HHJ45_13155 PF00591 Glycosyl transferase family, a/b domain HHJ45_13155 PF00117 Glutamine amidotransferase class-I HHJ45_13155 PF02885 Glycosyl transferase family, helical bundle domain HHJ45_13160 PF00218 Indole-3-glycerol phosphate synthase HHJ45_13160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HHJ45_13165 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_13170 PF00290 Tryptophan synthase alpha chain HHJ45_13175 PF10685 Stress-induced bacterial acidophilic repeat motif HHJ45_13180 PF05974 Domain of unknown function (DUF892) HHJ45_13185 PF05974 Domain of unknown function (DUF892) HHJ45_13190 PF03922 OmpW family HHJ45_13205 PF04279 Intracellular septation protein A HHJ45_13210 PF03061 Thioesterase superfamily HHJ45_13215 PF03544 Gram-negative bacterial TonB protein C-terminal HHJ45_13220 PF03795 YCII-related domain HHJ45_13225 PF02254 TrkA-N domain HHJ45_13225 PF07885 Ion channel HHJ45_13235 PF13396 Phospholipase_D-nuclease N-terminal HHJ45_13235 PF13091 PLD-like domain HHJ45_13240 PF04269 Protein of unknown function, DUF440 HHJ45_13245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_13245 PF00005 ABC transporter HHJ45_13250 PF00005 ABC transporter HHJ45_13250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_13255 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_13255 PF12911 N-terminal TM domain of oligopeptide transport permease C HHJ45_13260 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_13265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_13275 PF01914 MarC family integral membrane protein HHJ45_13280 PF00171 Aldehyde dehydrogenase family HHJ45_13280 PF00465 Iron-containing alcohol dehydrogenase HHJ45_13285 PF00265 Thymidine kinase HHJ45_13295 PF00483 Nucleotidyl transferase HHJ45_13300 PF00072 Response regulator receiver domain HHJ45_13305 PF01734 Patatin-like phospholipase HHJ45_13310 PF02810 SEC-C motif HHJ45_13315 PF00551 Formyl transferase HHJ45_13315 PF01842 ACT domain HHJ45_13335 PF02665 Nitrate reductase gamma subunit HHJ45_13340 PF02613 Nitrate reductase delta subunit HHJ45_13345 PF13247 4Fe-4S dicluster domain HHJ45_13345 PF14711 Respiratory nitrate reductase beta C-terminal HHJ45_13350 PF00384 Molybdopterin oxidoreductase HHJ45_13350 PF01568 Molydopterin dinucleotide binding domain HHJ45_13350 PF14710 Respiratory nitrate reductase alpha N-terminal HHJ45_13355 PF07690 Major Facilitator Superfamily HHJ45_13360 PF07730 Histidine kinase HHJ45_13360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_13360 PF00672 HAMP domain HHJ45_13360 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HHJ45_13365 PF00072 Response regulator receiver domain HHJ45_13365 PF00196 Bacterial regulatory proteins, luxR family HHJ45_13370 PF11924 Inverse autotransporter, beta-domain HHJ45_13375 PF02635 DsrE/DsrF-like family HHJ45_13380 PF04752 ChaC-like protein HHJ45_13385 PF06150 ChaB HHJ45_13390 PF01699 Sodium/calcium exchanger protein HHJ45_13395 PF13940 Toxin Ldr, type I toxin-antitoxin system HHJ45_13400 PF13940 Toxin Ldr, type I toxin-antitoxin system HHJ45_13405 PF13940 Toxin Ldr, type I toxin-antitoxin system HHJ45_13410 PF00793 DAHP synthetase I family HHJ45_13415 PF13369 Transglutaminase-like superfamily HHJ45_13420 PF04247 Invasion gene expression up-regulator, SirB HHJ45_13425 PF13847 Methyltransferase domain HHJ45_13425 PF17827 PrmC N-terminal domain HHJ45_13430 PF00472 RF-1 domain HHJ45_13430 PF03462 PCRF domain HHJ45_13435 PF01488 Shikimate / quinate 5-dehydrogenase HHJ45_13435 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HHJ45_13435 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HHJ45_13440 PF03550 Outer membrane lipoprotein LolB HHJ45_13445 PF00288 GHMP kinases N terminal domain HHJ45_13445 PF08544 GHMP kinases C terminal HHJ45_13450 PF14572 Phosphoribosyl synthetase-associated domain HHJ45_13450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HHJ45_13455 PF00916 Sulfate permease family HHJ45_13455 PF01740 STAS domain HHJ45_13460 PF10762 Protein of unknown function (DUF2583) HHJ45_13465 PF01195 Peptidyl-tRNA hydrolase HHJ45_13470 PF06071 Protein of unknown function (DUF933) HHJ45_13470 PF01926 50S ribosome-binding GTPase HHJ45_13475 PF03212 Pertactin HHJ45_13475 PF03797 Autotransporter beta-domain HHJ45_13480 PF00989 PAS fold HHJ45_13480 PF02954 Bacterial regulatory protein, Fis family HHJ45_13480 PF00158 Sigma-54 interaction domain HHJ45_13485 PF02733 Dak1 domain HHJ45_13490 PF02734 DAK2 domain HHJ45_13495 PF00391 PEP-utilising enzyme, mobile domain HHJ45_13495 PF00381 PTS HPr component phosphorylation site HHJ45_13495 PF03610 PTS system fructose IIA component HHJ45_13495 PF05524 PEP-utilising enzyme, N-terminal HHJ45_13500 PF01204 Trehalase HHJ45_13510 PF04226 Transglycosylase associated protein HHJ45_13515 PF07317 Flagellar regulator YcgR HHJ45_13515 PF07238 PilZ domain HHJ45_13520 PF01464 Transglycosylase SLT domain HHJ45_13525 PF17676 LD-carboxypeptidase C-terminal domain HHJ45_13525 PF02016 LD-carboxypeptidase N-terminal domain HHJ45_13530 PF02080 TrkA-C domain HHJ45_13530 PF00999 Sodium/hydrogen exchanger family HHJ45_13530 PF03471 Transporter associated domain HHJ45_13535 PF00842 Alanine racemase, C-terminal domain HHJ45_13535 PF01168 Alanine racemase, N-terminal domain HHJ45_13540 PF01266 FAD dependent oxidoreductase HHJ45_13545 PF04293 SpoVR like protein HHJ45_13550 PF00392 Bacterial regulatory proteins, gntR family HHJ45_13550 PF07840 FadR C-terminal domain HHJ45_13555 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HHJ45_13560 PF02600 Disulfide bond formation protein DsbB HHJ45_13565 PF00817 impB/mucB/samB family HHJ45_13565 PF13438 Domain of unknown function (DUF4113) HHJ45_13565 PF11798 IMS family HHH motif HHJ45_13565 PF11799 impB/mucB/samB family C-terminal domain HHJ45_13570 PF00717 Peptidase S24-like HHJ45_13575 PF06109 Haemolysin E (HlyE) HHJ45_13580 PF03692 Putative zinc- or iron-chelating domain HHJ45_13585 PF01557 Fumarylacetoacetate (FAA) hydrolase family HHJ45_13590 PF05166 YcgL domain HHJ45_13595 PF04151 Bacterial pre-peptidase C-terminal domain HHJ45_13600 PF05666 Fels-1 Prophage Protein-like HHJ45_13605 PF03775 Septum formation inhibitor MinC, C-terminal domain HHJ45_13605 PF05209 Septum formation inhibitor MinC, N-terminal domain HHJ45_13610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HHJ45_13615 PF03776 Septum formation topological specificity factor MinE HHJ45_13640 PF13436 Glycine-zipper domain HHJ45_13645 PF16456 YmgD protein HHJ45_13650 PF03797 Autotransporter beta-domain HHJ45_13665 PF00563 EAL domain HHJ45_13665 PF12792 CSS motif domain associated with EAL HHJ45_13680 PF07166 Protein of unknown function (DUF1398) HHJ45_13695 PF00180 Isocitrate/isopropylmalate dehydrogenase HHJ45_13700 PF00849 RNA pseudouridylate synthase HHJ45_13705 PF00293 NUDIX domain HHJ45_13715 PF04356 Protein of unknown function (DUF489) HHJ45_13720 PF08328 Adenylosuccinate lyase C-terminal HHJ45_13720 PF00206 Lyase HHJ45_13725 PF00486 Transcriptional regulatory protein, C terminal HHJ45_13725 PF00072 Response regulator receiver domain HHJ45_13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_13730 PF08918 PhoQ Sensor HHJ45_13735 PF08007 Cupin superfamily protein HHJ45_13740 PF07687 Peptidase dimerisation domain HHJ45_13740 PF01546 Peptidase family M20/M25/M40 HHJ45_13745 PF08402 TOBE domain HHJ45_13745 PF00005 ABC transporter HHJ45_13750 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_13755 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_13760 PF13416 Bacterial extracellular solute-binding protein HHJ45_13765 PF12158 Protein of unknown function (DUF3592) HHJ45_13770 PF04536 TPM domain HHJ45_13775 PF04536 TPM domain HHJ45_13780 PF02146 Sir2 family HHJ45_13785 PF00480 ROK family HHJ45_13790 PF02687 FtsX-like permease family HHJ45_13790 PF12704 MacB-like periplasmic core domain HHJ45_13795 PF00005 ABC transporter HHJ45_13800 PF12704 MacB-like periplasmic core domain HHJ45_13800 PF02687 FtsX-like permease family HHJ45_13805 PF01757 Acyltransferase family HHJ45_13810 PF00270 DEAD/DEAH box helicase HHJ45_13810 PF02559 CarD-like/TRCF domain HHJ45_13810 PF00271 Helicase conserved C-terminal domain HHJ45_13810 PF17757 UvrB interaction domain HHJ45_13810 PF03461 TRCF domain HHJ45_13815 PF17969 L,D-transpeptidase C-terminal domain HHJ45_13815 PF01476 LysM domain HHJ45_13815 PF03734 L,D-transpeptidase catalytic domain HHJ45_13820 PF07338 Protein of unknown function (DUF1471) HHJ45_13825 PF00440 Bacterial regulatory proteins, tetR family HHJ45_13830 PF05433 Glycine zipper 2TM domain HHJ45_13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_13840 PF05728 Uncharacterised protein family (UPF0227) HHJ45_13845 PF00933 Glycosyl hydrolase family 3 N terminal domain HHJ45_13850 PF01636 Phosphotransferase enzyme family HHJ45_13855 PF13036 Peptidoglycan-synthase activator LpoB HHJ45_13860 PF07233 Protein of unknown function (DUF1425) HHJ45_13865 PF01230 HIT domain HHJ45_13870 PF00593 TonB dependent receptor HHJ45_13870 PF07715 TonB-dependent Receptor Plug Domain HHJ45_13875 PF02378 Phosphotransferase system, EIIC HHJ45_13875 PF00367 phosphotransferase system, EIIB HHJ45_13880 PF01026 TatD related DNase HHJ45_13885 PF09115 DNA polymerase III, delta subunit, C terminal HHJ45_13890 PF02223 Thymidylate kinase HHJ45_13895 PF02618 YceG-like family HHJ45_13900 PF01063 Amino-transferase class IV HHJ45_13905 PF02801 Beta-ketoacyl synthase, C-terminal domain HHJ45_13905 PF00109 Beta-ketoacyl synthase, N-terminal domain HHJ45_13910 PF00550 Phosphopantetheine attachment site HHJ45_13920 PF00698 Acyl transferase domain HHJ45_13925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HHJ45_13925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HHJ45_13930 PF02504 Fatty acid synthesis protein HHJ45_13935 PF01783 Ribosomal L32p protein family HHJ45_13940 PF02620 Large ribosomal RNA subunit accumulation protein YceD HHJ45_13945 PF02545 Maf-like protein HHJ45_13950 PF00849 RNA pseudouridylate synthase HHJ45_13950 PF01479 S4 domain HHJ45_13955 PF00575 S1 RNA binding domain HHJ45_13955 PF12111 Polyribonucleotide phosphorylase C terminal HHJ45_13955 PF10150 Ribonuclease E/G family HHJ45_13960 PF00669 Bacterial flagellin N-terminal helical region HHJ45_13965 PF00460 Flagella basal body rod protein HHJ45_13965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HHJ45_13970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HHJ45_13970 PF10135 Rod binding protein HHJ45_13975 PF02119 Flagellar P-ring protein HHJ45_13980 PF02107 Flagellar L-ring protein HHJ45_13985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HHJ45_13985 PF00460 Flagella basal body rod protein HHJ45_13990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HHJ45_13990 PF00460 Flagella basal body rod protein HHJ45_13995 PF07559 Flagellar basal body protein FlaE HHJ45_13995 PF00460 Flagella basal body rod protein HHJ45_13995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HHJ45_14000 PF13860 FlgD Ig-like domain HHJ45_14000 PF03963 Flagellar hook capping protein - N-terminal region HHJ45_14000 PF13861 FlgD Tudor-like domain HHJ45_14005 PF00460 Flagella basal body rod protein HHJ45_14005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HHJ45_14010 PF00460 Flagella basal body rod protein HHJ45_14015 PF13144 Chaperone for flagella basal body P-ring formation HHJ45_14020 PF04316 Anti-sigma-28 factor, FlgM HHJ45_14025 PF05130 FlgN protein HHJ45_14030 PF03023 Lipid II flippase MurJ HHJ45_14035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ45_14040 PF04337 Protein of unknown function, DUF480 HHJ45_14045 PF13302 Acetyltransferase (GNAT) domain HHJ45_14050 PF07690 Major Facilitator Superfamily HHJ45_14055 PF04399 Glutaredoxin 2, C terminal domain HHJ45_14055 PF13417 Glutathione S-transferase, N-terminal domain HHJ45_14060 PF07273 Protein of unknown function (DUF1439) HHJ45_14065 PF01979 Amidohydrolase family HHJ45_14070 PF06183 DinI-like family HHJ45_14075 PF13991 BssS protein family HHJ45_14080 PF01266 FAD dependent oxidoreductase HHJ45_14085 PF10968 Protein of unknown function (DUF2770) HHJ45_14090 PF01292 Prokaryotic cytochrome b561 HHJ45_14095 PF04264 YceI-like domain HHJ45_14105 PF03279 Bacterial lipid A biosynthesis acyltransferase HHJ45_14110 PF07690 Major Facilitator Superfamily HHJ45_14115 PF13984 MsyB protein HHJ45_14120 PF07119 Protein of unknown function (DUF1375) HHJ45_14125 PF00535 Glycosyl transferase family 2 HHJ45_14130 PF04349 Periplasmic glucan biosynthesis protein, MdoG HHJ45_14135 PF01757 Acyltransferase family HHJ45_14140 PF13091 PLD-like domain HHJ45_14145 PF01661 Macro domain HHJ45_14155 PF10610 Thin aggregative fimbriae synthesis protein HHJ45_14160 PF07012 Curlin associated repeat HHJ45_14165 PF07012 Curlin associated repeat HHJ45_14170 PF00196 Bacterial regulatory proteins, luxR family HHJ45_14175 PF10627 Curli assembly protein CsgE HHJ45_14180 PF10614 Type VIII secretion system (T8SS), CsgF protein HHJ45_14185 PF03783 Curli production assembly/transport component CsgG HHJ45_14190 PF06496 Protein of unknown function (DUF1097) HHJ45_14195 PF02613 Nitrate reductase delta subunit HHJ45_14200 PF02811 PHP domain HHJ45_14205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ45_14240 PF14883 Hypothetical glycosyl hydrolase family 13 HHJ45_14240 PF01522 Polysaccharide deacetylase HHJ45_14245 PF00535 Glycosyl transferase family 2 HHJ45_14250 PF13994 PgaD-like protein HHJ45_14255 PF02562 PhoH-like protein HHJ45_14260 PF04261 Dyp-type peroxidase family HHJ45_14265 PF13473 Cupredoxin-like domain HHJ45_14265 PF09375 Imelysin HHJ45_14270 PF03239 Iron permease FTR1 family HHJ45_14275 PF00474 Sodium:solute symporter family HHJ45_14285 PF01619 Proline dehydrogenase HHJ45_14285 PF14850 DNA-binding domain of Proline dehydrogenase HHJ45_14285 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HHJ45_14285 PF00171 Aldehyde dehydrogenase family HHJ45_14290 PF08362 YcdC-like protein, C-terminal region HHJ45_14290 PF00440 Bacterial regulatory proteins, tetR family HHJ45_14295 PF00296 Luciferase-like monooxygenase HHJ45_14300 PF00857 Isochorismatase family HHJ45_14305 PF01042 Endoribonuclease L-PSP HHJ45_14310 PF00561 alpha/beta hydrolase fold HHJ45_14315 PF00881 Nitroreductase family HHJ45_14320 PF01613 Flavin reductase like domain HHJ45_14325 PF00860 Permease family HHJ45_14330 PF10685 Stress-induced bacterial acidophilic repeat motif HHJ45_14335 PF03358 NADPH-dependent FMN reductase HHJ45_14340 PF13993 YccJ-like protein HHJ45_14345 PF00328 Histidine phosphatase superfamily (branch 2) HHJ45_14355 PF01556 DnaJ C terminal domain HHJ45_14355 PF00226 DnaJ domain HHJ45_14365 PF02613 Nitrate reductase delta subunit HHJ45_14370 PF00384 Molybdopterin oxidoreductase HHJ45_14370 PF01568 Molydopterin dinucleotide binding domain HHJ45_14370 PF18364 Molybdopterin oxidoreductase N-terminal domain HHJ45_14375 PF03264 NapC/NirT cytochrome c family, N-terminal region HHJ45_14380 PF00072 Response regulator receiver domain HHJ45_14380 PF00486 Transcriptional regulatory protein, C terminal HHJ45_14385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ45_14390 PF00072 Response regulator receiver domain HHJ45_14390 PF01627 Hpt domain HHJ45_14390 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_14390 PF00672 HAMP domain HHJ45_14395 PF12801 4Fe-4S binding domain HHJ45_14400 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system HHJ45_14405 PF15939 Putative antitoxin of bacterial toxin-antitoxin system HHJ45_14415 PF00313 'Cold-shock' DNA-binding domain HHJ45_14420 PF00313 'Cold-shock' DNA-binding domain HHJ45_14430 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HHJ45_14435 PF06251 Capsule biosynthesis GfcC HHJ45_14440 PF06082 Exopolysaccharide biosynthesis protein YbjH HHJ45_14445 PF02563 Polysaccharide biosynthesis/export protein HHJ45_14445 PF10531 SLBB domain HHJ45_14445 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HHJ45_14450 PF01451 Low molecular weight phosphotyrosine protein phosphatase HHJ45_14455 PF13807 G-rich domain on putative tyrosine kinase HHJ45_14455 PF13614 AAA domain HHJ45_14455 PF02706 Chain length determinant protein HHJ45_14460 PF00328 Histidine phosphatase superfamily (branch 2) HHJ45_14465 PF08173 Membrane bound YbgT-like protein HHJ45_14470 PF02322 Cytochrome bd terminal oxidase subunit II HHJ45_14475 PF01654 Cytochrome bd terminal oxidase subunit I HHJ45_14480 PF04809 HupH hydrogenase expression protein, C-terminal conserved region HHJ45_14485 PF07449 Hydrogenase-1 expression protein HyaE HHJ45_14490 PF01750 Hydrogenase maturation protease HHJ45_14495 PF01292 Prokaryotic cytochrome b561 HHJ45_14500 PF00374 Nickel-dependent hydrogenase HHJ45_14505 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HHJ45_14505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HHJ45_14515 PF01027 Inhibitor of apoptosis-promoting Bax1 HHJ45_14520 PF04358 DsrC like protein HHJ45_14525 PF00708 Acylphosphatase HHJ45_14530 PF10672 S-adenosylmethionine-dependent methyltransferase HHJ45_14530 PF17785 PUA-like domain HHJ45_14535 PF08755 Hemimethylated DNA-binding protein YccV like HHJ45_14540 PF13380 CoA binding domain HHJ45_14545 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HHJ45_14550 PF02142 MGS-like domain HHJ45_14555 PF12462 DNA helicase IV / RNA helicase N terminal HHJ45_14555 PF00580 UvrD/REP helicase N-terminal domain HHJ45_14555 PF13361 UvrD-like helicase C-terminal domain HHJ45_14560 PF03733 Inner membrane component domain HHJ45_14565 PF12805 FUSC-like inner membrane protein yccS HHJ45_14570 PF04994 TfoX C-terminal domain HHJ45_14570 PF04993 TfoX N-terminal domain HHJ45_14575 PF03846 Cell division inhibitor SulA HHJ45_14580 PF00691 OmpA family HHJ45_14580 PF01389 OmpA-like transmembrane domain HHJ45_14585 PF17414 MatP C-terminal ribbon-helix-helix domain HHJ45_14585 PF06303 MatP N-terminal domain HHJ45_14590 PF13654 AAA domain HHJ45_14590 PF05362 Lon protease (S16) C-terminal proteolytic domain HHJ45_14595 PF07977 FabA-like domain HHJ45_14600 PF04957 Ribosome modulation factor HHJ45_14605 PF03886 ABC-type transport auxiliary lipoprotein component HHJ45_14610 PF02470 MlaD protein HHJ45_14615 PF04403 Paraquat-inducible protein A HHJ45_14620 PF00005 ABC transporter HHJ45_14620 PF16326 ABC transporter C-terminal domain HHJ45_14620 PF12848 ABC transporter HHJ45_14625 PF01170 Putative RNA methylase family UPF0020 HHJ45_14625 PF02926 THUMP domain HHJ45_14625 PF10672 S-adenosylmethionine-dependent methyltransferase HHJ45_14630 PF03476 MOSC N-terminal beta barrel domain HHJ45_14630 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_14630 PF03473 MOSC domain HHJ45_14635 PF07126 Cell-division protein ZapC HHJ45_14640 PF01180 Dihydroorotate dehydrogenase HHJ45_14645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_14645 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_14650 PF00419 Fimbrial protein HHJ45_14655 PF00419 Fimbrial protein HHJ45_14660 PF00419 Fimbrial protein HHJ45_14665 PF13953 PapC C-terminal domain HHJ45_14665 PF00577 Outer membrane usher protein HHJ45_14665 PF13954 PapC N-terminal domain HHJ45_14670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_14670 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_14675 PF00419 Fimbrial protein HHJ45_14680 PF03358 NADPH-dependent FMN reductase HHJ45_14685 PF09084 NMT1/THI5 like HHJ45_14690 PF00296 Luciferase-like monooxygenase HHJ45_14695 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_14700 PF00005 ABC transporter HHJ45_14705 PF01433 Peptidase family M1 domain HHJ45_14705 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HHJ45_14705 PF11940 Domain of unknown function (DUF3458) Ig-like fold HHJ45_14710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HHJ45_14710 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HHJ45_14715 PF01336 OB-fold nucleic acid binding domain HHJ45_14715 PF00152 tRNA synthetases class II (D, K and N) HHJ45_14720 PF00267 Gram-negative porin HHJ45_14725 PF00155 Aminotransferase class I and II HHJ45_14735 PF00753 Metallo-beta-lactamase superfamily HHJ45_14740 PF05951 Bacterial protein of unknown function (DUF882) HHJ45_14745 PF01471 Putative peptidoglycan binding domain HHJ45_14745 PF03734 L,D-transpeptidase catalytic domain HHJ45_14750 PF16330 MukB hinge domain HHJ45_14750 PF04310 MukB N-terminal HHJ45_14755 PF04288 MukE-like family HHJ45_14760 PF03882 MukF winged-helix domain HHJ45_14760 PF17192 MukF middle domain HHJ45_14760 PF17193 MukF C-terminal domain HHJ45_14765 PF13847 Methyltransferase domain HHJ45_14770 PF02698 DUF218 domain HHJ45_14775 PF01636 Phosphotransferase enzyme family HHJ45_14780 PF02348 Cytidylyltransferase HHJ45_14785 PF03966 Trm112p-like protein HHJ45_14790 PF06224 Winged helix DNA-binding domain HHJ45_14795 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HHJ45_14800 PF00005 ABC transporter HHJ45_14800 PF00664 ABC transporter transmembrane region HHJ45_14805 PF00753 Metallo-beta-lactamase superfamily HHJ45_14805 PF03772 Competence protein HHJ45_14810 PF00216 Bacterial DNA-binding protein HHJ45_14815 PF00575 S1 RNA binding domain HHJ45_14820 PF02224 Cytidylate kinase HHJ45_14825 PF01435 Peptidase family M48 HHJ45_14830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HHJ45_14835 PF00266 Aminotransferase class-V HHJ45_14840 PF04239 Protein of unknown function (DUF421) HHJ45_14845 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HHJ45_14845 PF18381 YcaO cyclodehydratase C-terminal domain HHJ45_14850 PF01226 Formate/nitrite transporter HHJ45_14855 PF02901 Pyruvate formate lyase-like HHJ45_14855 PF01228 Glycine radical HHJ45_14860 PF04055 Radical SAM superfamily HHJ45_14865 PF02525 Flavodoxin-like fold HHJ45_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_14870 PF03466 LysR substrate binding domain HHJ45_14875 PF13520 Amino acid permease HHJ45_14880 PF07690 Major Facilitator Superfamily HHJ45_14885 PF00857 Isochorismatase family HHJ45_14890 PF04976 DMSO reductase anchor subunit (DmsC) HHJ45_14895 PF12800 4Fe-4S binding domain HHJ45_14895 PF13247 4Fe-4S dicluster domain HHJ45_14900 PF00384 Molybdopterin oxidoreductase HHJ45_14900 PF01568 Molydopterin dinucleotide binding domain HHJ45_14900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HHJ45_14905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HHJ45_14905 PF02403 Seryl-tRNA synthetase N-terminal domain HHJ45_14910 PF12002 MgsA AAA+ ATPase C terminal HHJ45_14910 PF00004 ATPase family associated with various cellular activities (AAA) HHJ45_14910 PF16193 AAA C-terminal domain HHJ45_14915 PF03548 Outer membrane lipoprotein carrier protein LolA HHJ45_14920 PF01580 FtsK/SpoIIIE family HHJ45_14920 PF09397 Ftsk gamma domain HHJ45_14920 PF17854 FtsK alpha domain HHJ45_14920 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HHJ45_14925 PF01037 Lrp/AsnC ligand binding domain HHJ45_14930 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_14935 PF00664 ABC transporter transmembrane region HHJ45_14935 PF00005 ABC transporter HHJ45_14940 PF00005 ABC transporter HHJ45_14940 PF00664 ABC transporter transmembrane region HHJ45_14945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HHJ45_14950 PF01176 Translation initiation factor 1A / IF-1 HHJ45_14975 PF06755 CbtA_toxin of type IV toxin-antitoxin system HHJ45_14980 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HHJ45_14990 PF06174 Protein of unknown function (DUF987) HHJ45_14995 PF04002 RadC-like JAB domain HHJ45_15000 PF03230 Antirestriction protein HHJ45_15005 PF06067 Domain of unknown function (DUF932) HHJ45_15010 PF06006 Bacterial protein of unknown function (DUF905) HHJ45_15025 PF16168 Adhesin of bacterial autotransporter system, probable stalk HHJ45_15025 PF03797 Autotransporter beta-domain HHJ45_15025 PF13018 Extended Signal Peptide of Type V secretion system HHJ45_15055 PF05321 Haemolysin expression modulating protein HHJ45_15110 PF08281 Sigma-70, region 4 HHJ45_15110 PF04542 Sigma-70 region 2 HHJ45_15115 PF16220 Domain of unknown function (DUF4880) HHJ45_15115 PF04773 FecR protein HHJ45_15120 PF07715 TonB-dependent Receptor Plug Domain HHJ45_15120 PF07660 Secretin and TonB N terminus short domain HHJ45_15120 PF00593 TonB dependent receptor HHJ45_15125 PF01497 Periplasmic binding protein HHJ45_15130 PF01032 FecCD transport family HHJ45_15135 PF01032 FecCD transport family HHJ45_15140 PF00005 ABC transporter HHJ45_15165 PF01522 Polysaccharide deacetylase HHJ45_15170 PF13439 Glycosyltransferase Family 4 HHJ45_15170 PF00534 Glycosyl transferases group 1 HHJ45_15175 PF04393 Protein of unknown function (DUF535) HHJ45_15180 PF03279 Bacterial lipid A biosynthesis acyltransferase HHJ45_15190 PF02028 BCCT, betaine/carnitine/choline family transporter HHJ45_15195 PF10011 Predicted membrane protein (DUF2254) HHJ45_15210 PF13520 Amino acid permease HHJ45_15215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HHJ45_15215 PF01276 Orn/Lys/Arg decarboxylase, major domain HHJ45_15215 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HHJ45_15220 PF13520 Amino acid permease HHJ45_15235 PF03605 Anaerobic c4-dicarboxylate membrane transporter HHJ45_15240 PF01177 Asp/Glu/Hydantoin racemase HHJ45_15245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_15245 PF03466 LysR substrate binding domain HHJ45_15260 PF02796 Helix-turn-helix domain of resolvase HHJ45_15260 PF00665 Integrase core domain HHJ45_15265 PF01695 IstB-like ATP binding protein HHJ45_15275 PF07690 Major Facilitator Superfamily HHJ45_15280 PF00294 pfkB family carbohydrate kinase HHJ45_15285 PF00455 DeoR C terminal sensor domain HHJ45_15285 PF08220 DeoR-like helix-turn-helix domain HHJ45_15300 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HHJ45_15300 PF08666 SAF domain HHJ45_15305 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HHJ45_15305 PF08666 SAF domain HHJ45_15310 PF00455 DeoR C terminal sensor domain HHJ45_15310 PF08220 DeoR-like helix-turn-helix domain HHJ45_15315 PF01116 Fructose-bisphosphate aldolase class-II HHJ45_15320 PF00367 phosphotransferase system, EIIB HHJ45_15320 PF02378 Phosphotransferase system, EIIC HHJ45_15325 PF00155 Aminotransferase class I and II HHJ45_15335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HHJ45_15360 PF13148 Protein of unknown function (DUF3987) HHJ45_15390 PF00589 Phage integrase family HHJ45_15390 PF13356 Arm DNA-binding domain HHJ45_15395 PF02861 Clp amino terminal domain, pathogenicity island component HHJ45_15395 PF07724 AAA domain (Cdc48 subfamily) HHJ45_15395 PF17871 AAA lid domain HHJ45_15395 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ45_15395 PF00004 ATPase family associated with various cellular activities (AAA) HHJ45_15400 PF02617 ATP-dependent Clp protease adaptor protein ClpS HHJ45_15405 PF00313 'Cold-shock' DNA-binding domain HHJ45_15410 PF12704 MacB-like periplasmic core domain HHJ45_15410 PF00005 ABC transporter HHJ45_15410 PF02687 FtsX-like permease family HHJ45_15415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_15420 PF04393 Protein of unknown function (DUF535) HHJ45_15425 PF11398 Protein of unknown function (DUF2813) HHJ45_15430 PF00230 Major intrinsic protein HHJ45_15435 PF03956 Lysine exporter LysO HHJ45_15440 PF03063 Prismane/CO dehydrogenase family HHJ45_15445 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_15445 PF00970 Oxidoreductase FAD-binding domain HHJ45_15445 PF00175 Oxidoreductase NAD-binding domain HHJ45_15450 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ45_15450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_15450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ45_15455 PF01212 Beta-eliminating lyase HHJ45_15465 PF01370 NAD dependent epimerase/dehydratase family HHJ45_15470 PF01510 N-acetylmuramoyl-L-alanine amidase HHJ45_15475 PF01906 Putative heavy-metal-binding HHJ45_15480 PF12883 Protein of unknown function (DUF3828) HHJ45_15485 PF00005 ABC transporter HHJ45_15490 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_15495 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_15500 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_15505 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_15510 PF05958 tRNA (Uracil-5-)-methyltransferase HHJ45_15515 PF10767 Protein of unknown function (DUF2593) HHJ45_15520 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_15525 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_15530 PF00005 ABC transporter HHJ45_15530 PF08402 TOBE domain HHJ45_15535 PF13416 Bacterial extracellular solute-binding protein HHJ45_15540 PF10722 Putative bacterial sensory transduction regulator HHJ45_15545 PF08443 RimK-like ATP-grasp domain HHJ45_15545 PF18030 RimK PreATP-grasp domain HHJ45_15565 PF07214 Protein of unknown function (DUF1418) HHJ45_15570 PF00462 Glutaredoxin HHJ45_15575 PF11045 Putative inner membrane protein of Enterobacteriaceae HHJ45_15580 PF02080 TrkA-C domain HHJ45_15580 PF06826 Predicted Permease Membrane Region HHJ45_15585 PF00440 Bacterial regulatory proteins, tetR family HHJ45_15590 PF07690 Major Facilitator Superfamily HHJ45_15605 PF07690 Major Facilitator Superfamily HHJ45_15610 PF01569 PAP2 superfamily HHJ45_15615 PF08220 DeoR-like helix-turn-helix domain HHJ45_15615 PF00455 DeoR C terminal sensor domain HHJ45_15620 PF07943 Penicillin-binding protein 5, C-terminal domain HHJ45_15620 PF00768 D-alanyl-D-alanine carboxypeptidase HHJ45_15625 PF13417 Glutathione S-transferase, N-terminal domain HHJ45_15625 PF00043 Glutathione S-transferase, C-terminal domain HHJ45_15630 PF07995 Glucose / Sorbosone dehydrogenase HHJ45_15635 PF10799 Biofilm formation protein (YliH/bssR) HHJ45_15640 PF00919 Uncharacterized protein family UPF0004 HHJ45_15640 PF04055 Radical SAM superfamily HHJ45_15640 PF18693 TRAM domain HHJ45_15645 PF17156 Gammaproteobacterial periplasmic sensor domain HHJ45_15645 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_15655 PF12911 N-terminal TM domain of oligopeptide transport permease C HHJ45_15655 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_15660 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_15665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_15670 PF00005 ABC transporter HHJ45_15670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ45_15675 PF01112 Asparaginase HHJ45_15680 PF03453 MoeA N-terminal region (domain I and II) HHJ45_15680 PF03454 MoeA C-terminal region (domain IV) HHJ45_15680 PF00994 Probable molybdopterin binding domain HHJ45_15685 PF00899 ThiF family HHJ45_15690 PF00923 Transaldolase/Fructose-6-phosphate aldolase HHJ45_15695 PF04055 Radical SAM superfamily HHJ45_15700 PF01228 Glycine radical HHJ45_15700 PF02901 Pyruvate formate lyase-like HHJ45_15710 PF07350 Protein of unknown function (DUF1479) HHJ45_15720 PF12848 ABC transporter HHJ45_15720 PF00005 ABC transporter HHJ45_15725 PF03734 L,D-transpeptidase catalytic domain HHJ45_15725 PF17969 L,D-transpeptidase C-terminal domain HHJ45_15730 PF03600 Citrate transporter HHJ45_15735 PF01325 Iron dependent repressor, N-terminal DNA binding domain HHJ45_15735 PF02742 Iron dependent repressor, metal binding and dimerisation domain HHJ45_15745 PF00884 Sulfatase HHJ45_15750 PF13505 Outer membrane protein beta-barrel domain HHJ45_15760 PF00892 EamA-like transporter family HHJ45_15765 PF00210 Ferritin-like domain HHJ45_15770 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_15775 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_15780 PF00005 ABC transporter HHJ45_15785 PF00924 Mechanosensitive ion channel HHJ45_15790 PF05971 RNA methyltransferase HHJ45_15795 PF07338 Protein of unknown function (DUF1471) HHJ45_15800 PF07715 TonB-dependent Receptor Plug Domain HHJ45_15800 PF00593 TonB dependent receptor HHJ45_15805 PF13640 2OG-Fe(II) oxygenase superfamily HHJ45_15805 PF18331 PKHD-type hydroxylase C-terminal domain HHJ45_15810 PF01258 Prokaryotic dksA/traR C4-type zinc finger HHJ45_15815 PF07338 Protein of unknown function (DUF1471) HHJ45_15825 PF02615 Malate/L-lactate dehydrogenase HHJ45_15830 PF02885 Glycosyl transferase family, helical bundle domain HHJ45_15835 PF13307 Helicase C-terminal domain HHJ45_15835 PF06733 DEAD_2 HHJ45_15835 PF00270 DEAD/DEAH box helicase HHJ45_15840 PF08719 Domain of unknown function (DUF1768) HHJ45_15845 PF00271 Helicase conserved C-terminal domain HHJ45_15845 PF00270 DEAD/DEAH box helicase HHJ45_15850 PF09209 Tetracyclin repressor-like, C-terminal domain HHJ45_15850 PF00440 Bacterial regulatory proteins, tetR family HHJ45_15855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_15860 PF00005 ABC transporter HHJ45_15875 PF11076 Putative inner membrane protein YbhQ HHJ45_15880 PF03372 Endonuclease/Exonuclease/phosphatase family HHJ45_15885 PF13091 PLD-like domain HHJ45_15890 PF03706 Lysylphosphatidylglycerol synthase TM region HHJ45_15895 PF01027 Inhibitor of apoptosis-promoting Bax1 HHJ45_15905 PF01027 Inhibitor of apoptosis-promoting Bax1 HHJ45_15910 PF02391 MoaE protein HHJ45_15915 PF02597 ThiS family HHJ45_15920 PF01967 MoaC family HHJ45_15925 PF00994 Probable molybdopterin binding domain HHJ45_15930 PF06463 Molybdenum Cofactor Synthesis C HHJ45_15930 PF04055 Radical SAM superfamily HHJ45_15935 PF01933 Uncharacterised protein family UPF0052 HHJ45_15940 PF04851 Type III restriction enzyme, res subunit HHJ45_15940 PF02151 UvrB/uvrC motif HHJ45_15940 PF17757 UvrB interaction domain HHJ45_15940 PF00271 Helicase conserved C-terminal domain HHJ45_15940 PF12344 Ultra-violet resistance protein B HHJ45_15950 PF08241 Methyltransferase domain HHJ45_15955 PF00155 Aminotransferase class I and II HHJ45_15960 PF04055 Radical SAM superfamily HHJ45_15960 PF06968 Biotin and Thiamin Synthesis associated domain HHJ45_15965 PF00202 Aminotransferase class-III HHJ45_15970 PF01161 Phosphatidylethanolamine-binding protein HHJ45_15975 PF01095 Pectinesterase HHJ45_15980 PF00694 Aconitase C-terminal domain HHJ45_15980 PF00330 Aconitase family (aconitate hydratase) HHJ45_15985 PF00939 Sodium:sulfate symporter transmembrane region HHJ45_15990 PF04303 PrpF protein HHJ45_15995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_15995 PF03466 LysR substrate binding domain HHJ45_16000 PF10282 Lactonase, 7-bladed beta-propeller HHJ45_16010 PF00005 ABC transporter HHJ45_16010 PF03459 TOBE domain HHJ45_16015 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_16025 PF10766 Multidrug efflux pump-associated protein AcrZ HHJ45_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_16030 PF03459 TOBE domain HHJ45_16035 PF00005 ABC transporter HHJ45_16040 PF16363 GDP-mannose 4,6 dehydratase HHJ45_16045 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HHJ45_16045 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HHJ45_16050 PF00288 GHMP kinases N terminal domain HHJ45_16050 PF10509 Galactokinase galactose-binding signature HHJ45_16050 PF08544 GHMP kinases C terminal HHJ45_16055 PF01263 Aldose 1-epimerase HHJ45_16060 PF00300 Histidine phosphatase superfamily (branch 1) HHJ45_16065 PF00793 DAHP synthetase I family HHJ45_16070 PF13985 YbgS-like protein HHJ45_16075 PF01545 Cation efflux family HHJ45_16080 PF04973 Nicotinamide mononucleotide transporter HHJ45_16085 PF02445 Quinolinate synthetase A protein HHJ45_16130 PF13174 Tetratricopeptide repeat HHJ45_16130 PF16331 TolA binding protein trimerisation HHJ45_16135 PF00691 OmpA family HHJ45_16140 PF04052 TolB amino-terminal domain HHJ45_16140 PF07676 WD40-like Beta Propeller Repeat HHJ45_16145 PF06519 TolA C-terminal HHJ45_16150 PF02472 Biopolymer transport protein ExbD/TolR HHJ45_16155 PF01618 MotA/TolQ/ExbB proton channel family HHJ45_16160 PF03061 Thioesterase superfamily HHJ45_16165 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HHJ45_16170 PF08173 Membrane bound YbgT-like protein HHJ45_16175 PF02322 Cytochrome bd terminal oxidase subunit II HHJ45_16180 PF01654 Cytochrome bd terminal oxidase subunit I HHJ45_16190 PF01074 Glycosyl hydrolases family 38 N-terminal domain HHJ45_16190 PF07748 Glycosyl hydrolases family 38 C-terminal domain HHJ45_16190 PF09261 Alpha mannosidase middle domain HHJ45_16195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_16195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_16195 PF02378 Phosphotransferase system, EIIC HHJ45_16200 PF07702 UTRA domain HHJ45_16200 PF00392 Bacterial regulatory proteins, gntR family HHJ45_16205 PF02629 CoA binding domain HHJ45_16205 PF00549 CoA-ligase HHJ45_16210 PF00549 CoA-ligase HHJ45_16210 PF08442 ATP-grasp domain HHJ45_16215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HHJ45_16215 PF00364 Biotin-requiring enzyme HHJ45_16215 PF02817 e3 binding domain HHJ45_16220 PF02779 Transketolase, pyrimidine binding domain HHJ45_16220 PF16870 2-oxoglutarate dehydrogenase C-terminal HHJ45_16220 PF16078 2-oxoglutarate dehydrogenase N-terminus HHJ45_16220 PF00676 Dehydrogenase E1 component HHJ45_16225 PF13085 2Fe-2S iron-sulfur cluster binding domain HHJ45_16230 PF00890 FAD binding domain HHJ45_16230 PF02910 Fumarate reductase flavoprotein C-term HHJ45_16235 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HHJ45_16240 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HHJ45_16250 PF00285 Citrate synthase, C-terminal domain HHJ45_16260 PF00577 Outer membrane usher protein HHJ45_16260 PF13954 PapC N-terminal domain HHJ45_16260 PF13953 PapC C-terminal domain HHJ45_16265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_16265 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_16270 PF00419 Fimbrial protein HHJ45_16275 PF05145 Transition state regulatory protein AbrB HHJ45_16280 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HHJ45_16280 PF06827 Zinc finger found in FPG and IleRS HHJ45_16280 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HHJ45_16285 PF03746 LamB/YcsF family HHJ45_16290 PF02626 Carboxyltransferase domain, subdomain A and B HHJ45_16295 PF02682 Carboxyltransferase domain, subdomain C and D HHJ45_16300 PF01784 NIF3 (NGG1p interacting factor 3) HHJ45_16305 PF00854 POT family HHJ45_16310 PF00875 DNA photolyase HHJ45_16310 PF03441 FAD binding domain of DNA photolyase HHJ45_16315 PF08349 Protein of unknown function (DUF1722) HHJ45_16335 PF03527 RHS protein HHJ45_16335 PF05593 RHS Repeat HHJ45_16360 PF10725 Protein of unknown function (DUF2517) HHJ45_16365 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) HHJ45_16370 PF03814 Potassium-transporting ATPase A subunit HHJ45_16380 PF02669 K+-transporting ATPase, c chain HHJ45_16385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_16385 PF02702 Osmosensitive K+ channel His kinase sensor domain HHJ45_16385 PF13492 GAF domain HHJ45_16385 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_16385 PF13493 Domain of unknown function (DUF4118) HHJ45_16390 PF00072 Response regulator receiver domain HHJ45_16390 PF00486 Transcriptional regulatory protein, C terminal HHJ45_16405 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HHJ45_16405 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HHJ45_16405 PF01276 Orn/Lys/Arg decarboxylase, major domain HHJ45_16410 PF13520 Amino acid permease HHJ45_16415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HHJ45_16415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HHJ45_16415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HHJ45_16415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HHJ45_16420 PF03925 SeqA protein C-terminal domain HHJ45_16420 PF17206 SeqA protein N-terminal domain HHJ45_16425 PF12697 Alpha/beta hydrolase family HHJ45_16430 PF01402 Ribbon-helix-helix protein, copG family HHJ45_16435 PF00258 Flavodoxin HHJ45_16445 PF01475 Ferric uptake regulator family HHJ45_16450 PF13982 YbfN-like lipoprotein HHJ45_16455 PF03573 outer membrane porin, OprD family HHJ45_16460 PF00749 tRNA synthetases class I (E and Q), catalytic domain HHJ45_16460 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HHJ45_16465 PF00367 phosphotransferase system, EIIB HHJ45_16465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HHJ45_16465 PF02378 Phosphotransferase system, EIIC HHJ45_16470 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HHJ45_16475 PF01979 Amidohydrolase family HHJ45_16480 PF00480 ROK family HHJ45_16480 PF01047 MarR family HHJ45_16485 PF13344 Haloacid dehalogenase-like hydrolase HHJ45_16490 PF00733 Asparagine synthase HHJ45_16490 PF13537 Glutamine amidotransferase domain HHJ45_16530 PF01494 FAD binding domain HHJ45_16535 PF01938 TRAM domain HHJ45_16535 PF00919 Uncharacterized protein family UPF0004 HHJ45_16535 PF04055 Radical SAM superfamily HHJ45_16540 PF02562 PhoH-like protein HHJ45_16545 PF02130 Uncharacterized protein family UPF0054 HHJ45_16550 PF00571 CBS domain HHJ45_16550 PF03471 Transporter associated domain HHJ45_16555 PF00795 Carbon-nitrogen hydrolase HHJ45_16560 PF01694 Rhomboid family HHJ45_16565 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ45_16570 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_16575 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_16580 PF00005 ABC transporter HHJ45_16585 PF01156 Inosine-uridine preferring nucleoside hydrolase HHJ45_16590 PF00012 Hsp70 protein HHJ45_16615 PF06889 Protein of unknown function (DUF1266) HHJ45_16620 PF08238 Sel1 repeat HHJ45_16625 PF07295 Zinc-ribbon containing domain HHJ45_16630 PF13603 Leucyl-tRNA synthetase, Domain 2 HHJ45_16630 PF08264 Anticodon-binding domain of tRNA HHJ45_16630 PF00133 tRNA synthetases class I (I, L, M and V) HHJ45_16635 PF04390 Lipopolysaccharide-assembly HHJ45_16640 PF06144 DNA polymerase III, delta subunit HHJ45_16640 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HHJ45_16645 PF01467 Cytidylyltransferase-like HHJ45_16650 PF00300 Histidine phosphatase superfamily (branch 1) HHJ45_16660 PF02590 Predicted SPOUT methyltransferase HHJ45_16665 PF00905 Penicillin binding protein transpeptidase domain HHJ45_16665 PF03717 Penicillin-binding Protein dimerisation domain HHJ45_16670 PF01098 Cell cycle protein HHJ45_16675 PF05036 Sporulation related domain HHJ45_16675 PF03330 Lytic transglycolase HHJ45_16680 PF00768 D-alanyl-D-alanine carboxypeptidase HHJ45_16680 PF07943 Penicillin-binding protein 5, C-terminal domain HHJ45_16685 PF04359 Protein of unknown function (DUF493) HHJ45_16690 PF03099 Biotin/lipoate A/B protein ligase family HHJ45_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_16695 PF03466 LysR substrate binding domain HHJ45_16700 PF04055 Radical SAM superfamily HHJ45_16700 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HHJ45_16705 PF02416 mttA/Hcf106 family HHJ45_16710 PF00795 Carbon-nitrogen hydrolase HHJ45_16715 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HHJ45_16720 PF00313 'Cold-shock' DNA-binding domain HHJ45_16730 PF03606 C4-dicarboxylate anaerobic carrier HHJ45_16735 PF12431 Transcriptional regulator HHJ45_16735 PF00072 Response regulator receiver domain HHJ45_16740 PF17203 Single cache domain 3 HHJ45_16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_16740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HHJ45_16740 PF00989 PAS fold HHJ45_16745 PF08218 Citrate lyase ligase C-terminal domain HHJ45_16750 PF06857 Malonate decarboxylase delta subunit (MdcD) HHJ45_16755 PF03328 HpcH/HpaI aldolase/citrate lyase family HHJ45_16760 PF04223 Citrate lyase, alpha subunit (CitF) HHJ45_16765 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HHJ45_16770 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HHJ45_16775 PF00939 Sodium:sulfate symporter transmembrane region HHJ45_16780 PF00445 Ribonuclease T2 family HHJ45_16785 PF01272 Transcription elongation factor, GreA/GreB, C-term HHJ45_16785 PF14760 Rnk N-terminus HHJ45_16790 PF00107 Zinc-binding dehydrogenase HHJ45_16790 PF13823 Alcohol dehydrogenase GroES-associated HHJ45_16790 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_16795 PF00582 Universal stress protein family HHJ45_16800 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_16800 PF13192 Thioredoxin domain HHJ45_16805 PF10417 C-terminal domain of 1-Cys peroxiredoxin HHJ45_16805 PF00578 AhpC/TSA family HHJ45_16810 PF13098 Thioredoxin-like domain HHJ45_16815 PF03466 LysR substrate binding domain HHJ45_16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_16820 PF11922 Domain of unknown function (DUF3440) HHJ45_16820 PF01507 Phosphoadenosine phosphosulfate reductase family HHJ45_16825 PF02195 ParB-like nuclease domain HHJ45_16830 PF00155 Aminotransferase class I and II HHJ45_16835 PF00465 Iron-containing alcohol dehydrogenase HHJ45_16840 PF04328 Selenoprotein, putative HHJ45_16845 PF13722 5TM C-terminal transporter carbon starvation CstA HHJ45_16845 PF02554 Carbon starvation protein CstA HHJ45_16850 PF03061 Thioesterase superfamily HHJ45_16860 PF00550 Phosphopantetheine attachment site HHJ45_16860 PF00857 Isochorismatase family HHJ45_16865 PF00501 AMP-binding enzyme HHJ45_16865 PF13193 AMP-binding enzyme C-terminal domain HHJ45_16870 PF00425 chorismate binding enzyme HHJ45_16875 PF01497 Periplasmic binding protein HHJ45_16880 PF05977 Transmembrane secretion effector HHJ45_16885 PF01032 FecCD transport family HHJ45_16890 PF01032 FecCD transport family HHJ45_16895 PF00005 ABC transporter HHJ45_16900 PF02706 Chain length determinant protein HHJ45_16905 PF00550 Phosphopantetheine attachment site HHJ45_16905 PF00501 AMP-binding enzyme HHJ45_16905 PF00668 Condensation domain HHJ45_16905 PF00975 Thioesterase domain HHJ45_16905 PF13193 AMP-binding enzyme C-terminal domain HHJ45_16910 PF03621 MbtH-like protein HHJ45_16915 PF00756 Putative esterase HHJ45_16915 PF11806 Domain of unknown function (DUF3327) HHJ45_16920 PF00593 TonB dependent receptor HHJ45_16920 PF07715 TonB-dependent Receptor Plug Domain HHJ45_16925 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HHJ45_16925 PF01648 4'-phosphopantetheinyl transferase superfamily HHJ45_16930 PF01848 Hok/gef family HHJ45_16935 PF01848 Hok/gef family HHJ45_16940 PF04107 Glutamate-cysteine ligase family 2(GCS2) HHJ45_16945 PF06643 Protein of unknown function (DUF1158) HHJ45_16950 PF04237 YjbR HHJ45_16955 PF00881 Nitroreductase family HHJ45_16960 PF00924 Mechanosensitive ion channel HHJ45_16965 PF00324 Amino acid permease HHJ45_16970 PF00873 AcrB/AcrD/AcrF family HHJ45_16975 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_16975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_16980 PF11604 Copper binding periplasmic protein CusF HHJ45_16985 PF02321 Outer membrane efflux protein HHJ45_16990 PF00072 Response regulator receiver domain HHJ45_16990 PF00486 Transcriptional regulatory protein, C terminal HHJ45_16995 PF00672 HAMP domain HHJ45_16995 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_17005 PF04717 Type VI secretion system, phage-baseplate injector HHJ45_17020 PF03400 IS1 transposase HHJ45_17040 PF13632 Glycosyl transferase family group 2 HHJ45_17040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HHJ45_17045 PF13283 Bacteriophage N adsorption protein A C-term HHJ45_17050 PF14488 Domain of unknown function (DUF4434) HHJ45_17055 PF12833 Helix-turn-helix domain HHJ45_17060 PF01278 Omptin family HHJ45_17090 PF00239 Resolvase, N terminal domain HHJ45_17090 PF02796 Helix-turn-helix domain of resolvase HHJ45_17095 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HHJ45_17100 PF07484 Phage Tail Collar Domain HHJ45_17100 PF08400 Prophage tail fibre N-terminal HHJ45_17100 PF03335 Phage tail fibre repeat HHJ45_17105 PF06316 Enterobacterial Ail/Lom protein HHJ45_17135 PF06791 Prophage tail length tape measure protein HHJ45_17175 PF03864 Phage major capsid protein E HHJ45_17185 PF01957 NfeD-like C-terminal, partner-binding HHJ45_17185 PF01972 Serine dehydrogenase proteinase HHJ45_17195 PF02831 gpW HHJ45_17200 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HHJ45_17205 PF07471 Phage DNA packaging protein Nu1 HHJ45_17210 PF13132 Domain of unknown function (DUF3950) HHJ45_17215 PF06291 Bor protein HHJ45_17220 PF06085 Lipoprotein Rz1 precursor HHJ45_17225 PF00959 Phage lysozyme HHJ45_17230 PF04971 Bacteriophage P21 holin S HHJ45_17235 PF00267 Gram-negative porin HHJ45_17240 PF06530 Phage antitermination protein Q HHJ45_17250 PF05866 Endodeoxyribonuclease RusA HHJ45_17255 PF07102 Protein of unknown function (DUF1364) HHJ45_17290 PF06992 Replication protein P HHJ45_17310 PF00717 Peptidase S24-like HHJ45_17310 PF01381 Helix-turn-helix HHJ45_17370 PF00589 Phage integrase family HHJ45_17380 PF00196 Bacterial regulatory proteins, luxR family HHJ45_17380 PF00072 Response regulator receiver domain HHJ45_17385 PF00419 Fimbrial protein HHJ45_17390 PF00419 Fimbrial protein HHJ45_17395 PF13953 PapC C-terminal domain HHJ45_17395 PF00577 Outer membrane usher protein HHJ45_17395 PF13954 PapC N-terminal domain HHJ45_17400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_17400 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_17405 PF00419 Fimbrial protein HHJ45_17410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HHJ45_17410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HHJ45_17420 PF04307 LexA-binding, inner membrane-associated putative hydrolase HHJ45_17425 PF09190 DALR domain HHJ45_17425 PF01406 tRNA synthetases class I (C) catalytic domain HHJ45_17430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HHJ45_17435 PF12850 Calcineurin-like phosphoesterase superfamily domain HHJ45_17440 PF00731 AIR carboxylase HHJ45_17445 PF02222 ATP-grasp domain HHJ45_17445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HHJ45_17450 PF00696 Amino acid kinase family HHJ45_17455 PF11392 Protein of unknown function (DUF2877) HHJ45_17460 PF06545 Protein of unknown function (DUF1116) HHJ45_17465 PF00549 CoA-ligase HHJ45_17465 PF02629 CoA binding domain HHJ45_17470 PF02615 Malate/L-lactate dehydrogenase HHJ45_17475 PF01546 Peptidase family M20/M25/M40 HHJ45_17480 PF05899 Protein of unknown function (DUF861) HHJ45_17480 PF07883 Cupin domain HHJ45_17485 PF02595 Glycerate kinase family HHJ45_17490 PF00860 Permease family HHJ45_17495 PF01979 Amidohydrolase family HHJ45_17500 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HHJ45_17505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HHJ45_17505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HHJ45_17510 PF01261 Xylose isomerase-like TIM barrel HHJ45_17515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ45_17515 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ45_17515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_17520 PF09339 IclR helix-turn-helix domain HHJ45_17520 PF01614 Bacterial transcriptional regulator HHJ45_17525 PF04115 Ureidoglycolate lyase HHJ45_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_17530 PF03466 LysR substrate binding domain HHJ45_17545 PF00005 ABC transporter HHJ45_17550 PF13472 GDSL-like Lipase/Acylhydrolase family HHJ45_17555 PF00106 short chain dehydrogenase HHJ45_17560 PF00085 Thioredoxin HHJ45_17565 PF03649 Uncharacterised protein family (UPF0014) HHJ45_17570 PF00005 ABC transporter HHJ45_17575 PF16200 C-terminal region of band_7 HHJ45_17575 PF01145 SPFH domain / Band 7 family HHJ45_17580 PF01957 NfeD-like C-terminal, partner-binding HHJ45_17585 PF13411 MerR HTH family regulatory protein HHJ45_17590 PF13520 Amino acid permease HHJ45_17595 PF04960 Glutaminase HHJ45_17600 PF00403 Heavy-metal-associated domain HHJ45_17605 PF01381 Helix-turn-helix HHJ45_17610 PF01963 TraB family HHJ45_17615 PF04073 Aminoacyl-tRNA editing domain HHJ45_17620 PF02872 5'-nucleotidase, C-terminal domain HHJ45_17620 PF00149 Calcineurin-like phosphoesterase HHJ45_17625 PF07690 Major Facilitator Superfamily HHJ45_17630 PF00999 Sodium/hydrogen exchanger family HHJ45_17630 PF02254 TrkA-N domain HHJ45_17635 PF00294 pfkB family carbohydrate kinase HHJ45_17640 PF07859 alpha/beta hydrolase fold HHJ45_17645 PF00762 Ferrochelatase HHJ45_17650 PF05191 Adenylate kinase, active site lid HHJ45_17655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_17655 PF00183 Hsp90 protein HHJ45_17660 PF13662 Toprim domain HHJ45_17660 PF02132 RecR protein HHJ45_17665 PF02575 YbaB/EbfC DNA-binding family HHJ45_17670 PF12170 DNA polymerase III tau subunit V interacting with alpha HHJ45_17670 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HHJ45_17670 PF12169 DNA polymerase III subunits gamma and tau domain III HHJ45_17675 PF00156 Phosphoribosyl transferase domain HHJ45_17680 PF04304 Protein of unknown function (DUF454) HHJ45_17685 PF07445 Primosomal replication protein priC HHJ45_17690 PF10689 Protein of unknown function (DUF2496) HHJ45_17695 PF00924 Mechanosensitive ion channel HHJ45_17695 PF12795 Mechanosensitive ion channel porin domain HHJ45_17695 PF12794 Mechanosensitive ion channel inner membrane domain 1 HHJ45_17700 PF00440 Bacterial regulatory proteins, tetR family HHJ45_17700 PF08361 MAATS-type transcriptional repressor, C-terminal region HHJ45_17705 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_17705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_17710 PF00873 AcrB/AcrD/AcrF family HHJ45_17715 PF10757 Biofilm formation regulator YbaJ HHJ45_17720 PF05321 Haemolysin expression modulating protein HHJ45_17725 PF12464 Maltose acetyltransferase HHJ45_17725 PF14602 Hexapeptide repeat of succinyl-transferase HHJ45_17730 PF10777 Inner membrane protein YlaC HHJ45_17735 PF00563 EAL domain HHJ45_17735 PF12792 CSS motif domain associated with EAL HHJ45_17740 PF07237 Protein of unknown function (DUF1428) HHJ45_17750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HHJ45_17755 PF09619 Type III secretion system lipoprotein chaperone (YscW) HHJ45_17765 PF00909 Ammonium Transporter Family HHJ45_17770 PF00543 Nitrogen regulatory protein P-II HHJ45_17775 PF00664 ABC transporter transmembrane region HHJ45_17775 PF00005 ABC transporter HHJ45_17780 PF00664 ABC transporter transmembrane region HHJ45_17780 PF00005 ABC transporter HHJ45_17785 PF01037 Lrp/AsnC ligand binding domain HHJ45_17785 PF13404 AsnC-type helix-turn-helix domain HHJ45_17795 PF12793 Sugar transport-related sRNA regulator N-term HHJ45_17795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_17800 PF06508 Queuosine biosynthesis protein QueC HHJ45_17815 PF13145 PPIC-type PPIASE domain HHJ45_17820 PF00216 Bacterial DNA-binding protein HHJ45_17825 PF00004 ATPase family associated with various cellular activities (AAA) HHJ45_17825 PF05362 Lon protease (S16) C-terminal proteolytic domain HHJ45_17825 PF02190 ATP-dependent protease La (LON) substrate-binding domain HHJ45_17830 PF07724 AAA domain (Cdc48 subfamily) HHJ45_17830 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ45_17830 PF06689 ClpX C4-type zinc finger HHJ45_17835 PF00574 Clp protease HHJ45_17840 PF05698 Bacterial trigger factor protein (TF) C-terminus HHJ45_17840 PF05697 Bacterial trigger factor protein (TF) HHJ45_17840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ45_17845 PF01722 BolA-like protein HHJ45_17850 PF03923 Uncharacterized lipoprotein HHJ45_17850 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HHJ45_17855 PF07690 Major Facilitator Superfamily HHJ45_17860 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HHJ45_17860 PF06481 COX Aromatic Rich Motif HHJ45_17865 PF00115 Cytochrome C and Quinol oxidase polypeptide I HHJ45_17870 PF00510 Cytochrome c oxidase subunit III HHJ45_17875 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HHJ45_17880 PF01040 UbiA prenyltransferase family HHJ45_17900 PF07690 Major Facilitator Superfamily HHJ45_17905 PF04461 Protein of unknown function (DUF520) HHJ45_17910 PF02558 Ketopantoate reductase PanE/ApbA HHJ45_17910 PF08546 Ketopantoate reductase PanE/ApbA C terminal HHJ45_17915 PF01965 DJ-1/PfpI family HHJ45_17920 PF02568 Thiamine biosynthesis protein (ThiI) HHJ45_17920 PF02926 THUMP domain HHJ45_17925 PF02609 Exonuclease VII small subunit HHJ45_17930 PF00348 Polyprenyl synthetase HHJ45_17935 PF02779 Transketolase, pyrimidine binding domain HHJ45_17935 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HHJ45_17935 PF02780 Transketolase, C-terminal domain HHJ45_17940 PF00248 Aldo/keto reductase family HHJ45_17945 PF04608 Phosphatidylglycerophosphatase A HHJ45_17950 PF02769 AIR synthase related protein, C-terminal domain HHJ45_17950 PF00586 AIR synthase related protein, N-terminal domain HHJ45_17955 PF01029 NusB family HHJ45_17960 PF00885 6,7-dimethyl-8-ribityllumazine synthase HHJ45_17965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HHJ45_17965 PF01872 RibD C-terminal domain HHJ45_17970 PF03477 ATP cone domain HHJ45_17975 PF11622 Protein of unknown function (DUF3251) HHJ45_17980 PF03502 Nucleoside-specific channel-forming protein, Tsx HHJ45_17985 PF01844 HNH endonuclease HHJ45_17990 PF07549 SecD/SecF GG Motif HHJ45_17990 PF02355 Protein export membrane protein HHJ45_17995 PF02355 Protein export membrane protein HHJ45_17995 PF07549 SecD/SecF GG Motif HHJ45_17995 PF13721 SecD export protein N-terminal TM region HHJ45_18000 PF02699 Preprotein translocase subunit HHJ45_18005 PF01702 Queuine tRNA-ribosyltransferase HHJ45_18010 PF02547 Queuosine biosynthesis protein HHJ45_18015 PF04336 Acyl carrier protein phosphodiesterase HHJ45_18025 PF00324 Amino acid permease HHJ45_18030 PF05525 Branched-chain amino acid transport protein HHJ45_18035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_18035 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_18035 PF11808 Phosphate regulon sensor protein PhoR HHJ45_18035 PF00989 PAS fold HHJ45_18040 PF00486 Transcriptional regulatory protein, C terminal HHJ45_18040 PF00072 Response regulator receiver domain HHJ45_18045 PF00149 Calcineurin-like phosphoesterase HHJ45_18045 PF12320 Type 5 capsule protein repressor C-terminal domain HHJ45_18050 PF13476 AAA domain HHJ45_18055 PF07690 Major Facilitator Superfamily HHJ45_18060 PF00480 ROK family HHJ45_18065 PF04381 Putative exonuclease, RdgC HHJ45_18075 PF06865 Pyrimidine/purine nucleoside phosphorylase HHJ45_18080 PF07302 AroM protein HHJ45_18085 PF16362 YaiA protein HHJ45_18090 PF01202 Shikimate kinase HHJ45_18095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HHJ45_18100 PF14748 Pyrroline-5-carboxylate reductase dimerisation HHJ45_18100 PF03807 NADP oxidoreductase coenzyme F420-dependent HHJ45_18105 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_18105 PF05230 MASE2 domain HHJ45_18110 PF07769 psiF repeat HHJ45_18115 PF00245 Alkaline phosphatase HHJ45_18120 PF10796 Sigma-S stabilisation anti-adaptor protein HHJ45_18130 PF07478 D-ala D-ala ligase C-terminus HHJ45_18130 PF01820 D-ala D-ala ligase N-terminus HHJ45_18135 PF10953 Protein of unknown function (DUF2754) HHJ45_18140 PF10954 Protein of unknown function (DUF2755) HHJ45_18145 PF07759 Protein of unknown function (DUF1615) HHJ45_18150 PF05992 SbmA/BacA-like family HHJ45_18155 PF00144 Beta-lactamase HHJ45_18160 PF15977 Winged helix-turn-helix DNA binding HHJ45_18165 PF03212 Pertactin HHJ45_18165 PF03797 Autotransporter beta-domain HHJ45_18170 PF00490 Delta-aminolevulinic acid dehydratase HHJ45_18175 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HHJ45_18180 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_18185 PF00005 ABC transporter HHJ45_18190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HHJ45_18195 PF02585 GlcNAc-PI de-N-acetylase HHJ45_18200 PF00535 Glycosyl transferase family 2 HHJ45_18205 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_18215 PF02583 Metal-sensitive transcriptional repressor HHJ45_18220 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_18220 PF00107 Zinc-binding dehydrogenase HHJ45_18225 PF00756 Putative esterase HHJ45_18230 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HHJ45_18235 PF07690 Major Facilitator Superfamily HHJ45_18240 PF00682 HMGL-like HHJ45_18240 PF07836 DmpG-like communication domain HHJ45_18245 PF01118 Semialdehyde dehydrogenase, NAD binding domain HHJ45_18245 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HHJ45_18250 PF01557 Fumarylacetoacetate (FAA) hydrolase family HHJ45_18255 PF12697 Alpha/beta hydrolase family HHJ45_18260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HHJ45_18265 PF01494 FAD binding domain HHJ45_18270 PF09339 IclR helix-turn-helix domain HHJ45_18270 PF01614 Bacterial transcriptional regulator HHJ45_18275 PF00356 Bacterial regulatory proteins, lacI family HHJ45_18280 PF02929 Beta galactosidase small chain HHJ45_18280 PF16353 Domain of unknown function(DUF4981) HHJ45_18280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HHJ45_18280 PF00703 Glycosyl hydrolases family 2 HHJ45_18280 PF02837 Glycosyl hydrolases family 2, sugar binding domain HHJ45_18285 PF01306 LacY proton/sugar symporter HHJ45_18290 PF12464 Maltose acetyltransferase HHJ45_18290 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_18300 PF07690 Major Facilitator Superfamily HHJ45_18305 PF02560 Cyanate lyase C-terminal domain HHJ45_18310 PF00484 Carbonic anhydrase HHJ45_18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_18315 PF03466 LysR substrate binding domain HHJ45_18320 PF07969 Amidohydrolase family HHJ45_18325 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HHJ45_18330 PF16177 Acetyl-coenzyme A synthetase N-terminus HHJ45_18330 PF00501 AMP-binding enzyme HHJ45_18330 PF13193 AMP-binding enzyme C-terminal domain HHJ45_18335 PF03972 MmgE/PrpD family HHJ45_18340 PF00285 Citrate synthase, C-terminal domain HHJ45_18350 PF00158 Sigma-54 interaction domain HHJ45_18350 PF02954 Bacterial regulatory protein, Fis family HHJ45_18350 PF06506 Propionate catabolism activator HHJ45_18355 PF07338 Protein of unknown function (DUF1471) HHJ45_18360 PF01810 LysE type translocator HHJ45_18375 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_18375 PF00107 Zinc-binding dehydrogenase HHJ45_18380 PF02653 Branched-chain amino acid transport system / permease component HHJ45_18385 PF02653 Branched-chain amino acid transport system / permease component HHJ45_18390 PF00005 ABC transporter HHJ45_18395 PF13407 Periplasmic binding protein domain HHJ45_18405 PF07969 Amidohydrolase family HHJ45_18410 PF00696 Amino acid kinase family HHJ45_18415 PF06545 Protein of unknown function (DUF1116) HHJ45_18420 PF00549 CoA-ligase HHJ45_18420 PF02629 CoA binding domain HHJ45_18425 PF11392 Protein of unknown function (DUF2877) HHJ45_18430 PF12796 Ankyrin repeats (3 copies) HHJ45_18435 PF06496 Protein of unknown function (DUF1097) HHJ45_18440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_18440 PF03466 LysR substrate binding domain HHJ45_18445 PF00196 Bacterial regulatory proteins, luxR family HHJ45_18445 PF00563 EAL domain HHJ45_18450 PF03797 Autotransporter beta-domain HHJ45_18455 PF02028 BCCT, betaine/carnitine/choline family transporter HHJ45_18460 PF00440 Bacterial regulatory proteins, tetR family HHJ45_18460 PF13977 BetI-type transcriptional repressor, C-terminal HHJ45_18465 PF00171 Aldehyde dehydrogenase family HHJ45_18470 PF00732 GMC oxidoreductase HHJ45_18470 PF05199 GMC oxidoreductase HHJ45_18495 PF00563 EAL domain HHJ45_18495 PF00196 Bacterial regulatory proteins, luxR family HHJ45_18515 PF03212 Pertactin HHJ45_18515 PF03797 Autotransporter beta-domain HHJ45_18525 PF02589 LUD domain HHJ45_18530 PF11870 Domain of unknown function (DUF3390) HHJ45_18530 PF02589 LUD domain HHJ45_18530 PF13183 4Fe-4S dicluster domain HHJ45_18535 PF02754 Cysteine-rich domain HHJ45_18540 PF12833 Helix-turn-helix domain HHJ45_18540 PF12852 Cupin HHJ45_18545 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_18545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HHJ45_18550 PF07338 Protein of unknown function (DUF1471) HHJ45_18555 PF04224 Protein of unknown function, DUF417 HHJ45_18565 PF12833 Helix-turn-helix domain HHJ45_18570 PF11924 Inverse autotransporter, beta-domain HHJ45_18580 PF01197 Ribosomal protein L31 HHJ45_18590 PF00196 Bacterial regulatory proteins, luxR family HHJ45_18595 PF16449 Fimbrillin MatB HHJ45_18600 PF18649 EcpB C-terminal domain HHJ45_18605 PF16967 E-set like domain HHJ45_18605 PF15976 CS1-pili formation C-terminal HHJ45_18620 PF03692 Putative zinc- or iron-chelating domain HHJ45_18625 PF07274 Protein of unknown function (DUF1440) HHJ45_18630 PF01799 [2Fe-2S] binding domain HHJ45_18630 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ45_18635 PF03450 CO dehydrogenase flavoprotein C-terminal domain HHJ45_18635 PF00941 FAD binding domain in molybdopterin dehydrogenase HHJ45_18645 PF13478 XdhC Rossmann domain HHJ45_18645 PF02625 XdhC and CoxI family HHJ45_18650 PF03466 LysR substrate binding domain HHJ45_18660 PF00171 Aldehyde dehydrogenase family HHJ45_18665 PF01472 PUA domain HHJ45_18665 PF00696 Amino acid kinase family HHJ45_18670 PF00267 Gram-negative porin HHJ45_18675 PF07417 Sigma factor-binding transcriptional regulator Crl HHJ45_18680 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) HHJ45_18685 PF00156 Phosphoribosyl transferase domain HHJ45_18690 PF01546 Peptidase family M20/M25/M40 HHJ45_18690 PF07687 Peptidase dimerisation domain HHJ45_18695 PF00472 RF-1 domain HHJ45_18705 PF13673 Acetyltransferase (GNAT) domain HHJ45_18710 PF11798 IMS family HHH motif HHJ45_18710 PF00817 impB/mucB/samB family HHJ45_18710 PF11799 impB/mucB/samB family C-terminal domain HHJ45_18715 PF00691 OmpA family HHJ45_18715 PF13677 Membrane MotB of proton-channel complex MotA/MotB HHJ45_18720 PF00771 FHIPEP family HHJ45_18735 PF00877 NlpC/P60 family HHJ45_18740 PF04221 RelB antitoxin HHJ45_18745 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HHJ45_18750 PF03734 L,D-transpeptidase catalytic domain HHJ45_18755 PF13230 Glutamine amidotransferases class-II HHJ45_18760 PF13580 SIS domain HHJ45_18765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HHJ45_18765 PF02770 Acyl-CoA dehydrogenase, middle domain HHJ45_18765 PF09317 Domain of unknown function (DUF1974) HHJ45_18765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HHJ45_18775 PF00795 Carbon-nitrogen hydrolase HHJ45_18820 PF14220 Domain of unknown function (DUF4329) HHJ45_18820 PF03527 RHS protein HHJ45_18820 PF05593 RHS Repeat HHJ45_18825 PF04717 Type VI secretion system, phage-baseplate injector HHJ45_18830 PF05638 Type VI secretion system effector, Hcp HHJ45_18885 PF17871 AAA lid domain HHJ45_18885 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ45_18885 PF07724 AAA domain (Cdc48 subfamily) HHJ45_18885 PF00004 ATPase family associated with various cellular activities (AAA) HHJ45_18910 PF05638 Type VI secretion system effector, Hcp HHJ45_18935 PF00929 Exonuclease HHJ45_18940 PF00075 RNase H HHJ45_18945 PF08241 Methyltransferase domain HHJ45_18955 PF01464 Transglycosylase SLT domain HHJ45_18955 PF01476 LysM domain HHJ45_18960 PF08241 Methyltransferase domain HHJ45_18965 PF03372 Endonuclease/Exonuclease/phosphatase family HHJ45_18970 PF03466 LysR substrate binding domain HHJ45_18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_18975 PF00248 Aldo/keto reductase family HHJ45_19015 PF00005 ABC transporter HHJ45_19015 PF09383 NIL domain HHJ45_19020 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_19025 PF03180 NLPA lipoprotein HHJ45_19030 PF16358 RcsF lipoprotein HHJ45_19035 PF01980 tRNA-methyltransferase O HHJ45_19035 PF18389 TrmO C-terminal domain HHJ45_19040 PF04073 Aminoacyl-tRNA editing domain HHJ45_19040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HHJ45_19040 PF03129 Anticodon binding domain HHJ45_19055 PF04170 NlpE N-terminal domain HHJ45_19055 PF17185 NlpE C-terminal OB domain HHJ45_19060 PF00472 RF-1 domain HHJ45_19065 PF07152 YaeQ protein HHJ45_19070 PF06786 Uncharacterised protein family (UPF0253) HHJ45_19075 PF07073 Modulator of Rho-dependent transcription termination (ROF) HHJ45_19080 PF11734 TilS substrate C-terminal domain HHJ45_19080 PF01171 PP-loop family HHJ45_19080 PF09179 TilS substrate binding domain HHJ45_19085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HHJ45_19095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HHJ45_19100 PF02811 PHP domain HHJ45_19100 PF01336 OB-fold nucleic acid binding domain HHJ45_19100 PF07733 Bacterial DNA polymerase III alpha NTPase domain HHJ45_19100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HHJ45_19100 PF14579 Helix-hairpin-helix motif HHJ45_19105 PF01351 Ribonuclease HII HHJ45_19110 PF02684 Lipid-A-disaccharide synthetase HHJ45_19115 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_19115 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HHJ45_19120 PF07977 FabA-like domain HHJ45_19125 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_19125 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HHJ45_19130 PF03938 Outer membrane protein (OmpH-like) HHJ45_19135 PF01103 Surface antigen HHJ45_19135 PF07244 Surface antigen variable number repeat HHJ45_19140 PF17820 PDZ domain HHJ45_19140 PF02163 Peptidase family M50 HHJ45_19150 PF01255 Putative undecaprenyl diphosphate synthase HHJ45_19155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HHJ45_19155 PF13288 DXP reductoisomerase C-terminal domain HHJ45_19155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HHJ45_19160 PF01765 Ribosome recycling factor HHJ45_19165 PF00696 Amino acid kinase family HHJ45_19170 PF00889 Elongation factor TS HHJ45_19175 PF00318 Ribosomal protein S2 HHJ45_19180 PF00557 Metallopeptidase family M24 HHJ45_19185 PF01909 Nucleotidyltransferase domain HHJ45_19185 PF01966 HD domain HHJ45_19185 PF01842 ACT domain HHJ45_19185 PF08335 GlnD PII-uridylyltransferase HHJ45_19190 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_19190 PF14602 Hexapeptide repeat of succinyl-transferase HHJ45_19190 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HHJ45_19195 PF11944 Protein of unknown function (DUF3461) HHJ45_19200 PF05651 Putative sugar diacid recognition HHJ45_19200 PF17853 GGDEF-like domain HHJ45_19200 PF13556 PucR C-terminal helix-turn-helix domain HHJ45_19205 PF00595 PDZ domain HHJ45_19210 PF13286 Phosphohydrolase-associated domain HHJ45_19210 PF01966 HD domain HHJ45_19215 PF01048 Phosphorylase superfamily HHJ45_19220 PF01497 Periplasmic binding protein HHJ45_19225 PF03458 UPF0126 domain HHJ45_19230 PF01521 Iron-sulphur cluster biosynthesis HHJ45_19240 PF00654 Voltage gated chloride channel HHJ45_19245 PF00202 Aminotransferase class-III HHJ45_19250 PF01032 FecCD transport family HHJ45_19255 PF01497 Periplasmic binding protein HHJ45_19260 PF00005 ABC transporter HHJ45_19265 PF07715 TonB-dependent Receptor Plug Domain HHJ45_19265 PF00593 TonB dependent receptor HHJ45_19270 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal HHJ45_19270 PF00905 Penicillin binding protein transpeptidase domain HHJ45_19270 PF00912 Transglycosylase HHJ45_19270 PF14814 Bifunctional transglycosylase second domain HHJ45_19275 PF08482 ATP-dependent helicase C-terminal HHJ45_19275 PF04408 Helicase associated domain (HA2) HHJ45_19275 PF00270 DEAD/DEAH box helicase HHJ45_19275 PF00271 Helicase conserved C-terminal domain HHJ45_19280 PF02834 LigT like Phosphoesterase HHJ45_19285 PF03749 Sugar fermentation stimulation protein RE domain HHJ45_19285 PF17746 SfsA N-terminal OB domain HHJ45_19290 PF01258 Prokaryotic dksA/traR C4-type zinc finger HHJ45_19295 PF00749 tRNA synthetases class I (E and Q), catalytic domain HHJ45_19300 PF12627 Probable RNA and SrmB- binding site of polymerase A HHJ45_19300 PF01743 Poly A polymerase head domain HHJ45_19300 PF12626 Polymerase A arginine-rich C-terminus HHJ45_19305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HHJ45_19310 PF00419 Fimbrial protein HHJ45_19315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_19315 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_19320 PF13953 PapC C-terminal domain HHJ45_19320 PF00577 Outer membrane usher protein HHJ45_19320 PF13954 PapC N-terminal domain HHJ45_19325 PF00419 Fimbrial protein HHJ45_19330 PF00419 Fimbrial protein HHJ45_19335 PF00419 Fimbrial protein HHJ45_19340 PF00419 Fimbrial protein HHJ45_19345 PF02548 Ketopantoate hydroxymethyltransferase HHJ45_19350 PF02569 Pantoate-beta-alanine ligase HHJ45_19355 PF04754 Putative transposase, YhgA-like HHJ45_19360 PF02261 Aspartate decarboxylase HHJ45_19365 PF01522 Polysaccharide deacetylase HHJ45_19370 PF03610 PTS system fructose IIA component HHJ45_19375 PF01061 ABC-2 type transporter HHJ45_19380 PF00005 ABC transporter HHJ45_19385 PF00484 Carbonic anhydrase HHJ45_19390 PF00156 Phosphoribosyl transferase domain HHJ45_19395 PF01011 PQQ enzyme repeat HHJ45_19405 PF00394 Multicopper oxidase HHJ45_19405 PF07732 Multicopper oxidase HHJ45_19405 PF07731 Multicopper oxidase HHJ45_19410 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HHJ45_19415 PF17284 Spermidine synthase tetramerisation domain HHJ45_19420 PF02675 S-adenosylmethionine decarboxylase HHJ45_19425 PF06062 Uncharacterised protein family (UPF0231) HHJ45_19430 PF11791 Aconitate B N-terminal domain HHJ45_19430 PF00330 Aconitase family (aconitate hydratase) HHJ45_19430 PF06434 Aconitate hydratase 2 N-terminus HHJ45_19435 PF11737 Protein of unknown function (DUF3300) HHJ45_19440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HHJ45_19440 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_19445 PF02817 e3 binding domain HHJ45_19445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HHJ45_19445 PF00364 Biotin-requiring enzyme HHJ45_19450 PF00456 Transketolase, thiamine diphosphate binding domain HHJ45_19450 PF17831 Pyruvate dehydrogenase E1 component middle domain HHJ45_19455 PF00392 Bacterial regulatory proteins, gntR family HHJ45_19455 PF07729 FCD domain HHJ45_19460 PF00324 Amino acid permease HHJ45_19465 PF17113 Regulatory signalling modulator protein AmpE HHJ45_19470 PF01510 N-acetylmuramoyl-L-alanine amidase HHJ45_19475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HHJ45_19475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HHJ45_19480 PF07963 Prokaryotic N-terminal methylation motif HHJ45_19485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HHJ45_19485 PF00437 Type II/IV secretion system protein HHJ45_19490 PF00482 Type II secretion system (T2SS), protein F HHJ45_19495 PF00478 IMP dehydrogenase / GMP reductase domain HHJ45_19500 PF01121 Dephospho-CoA kinase HHJ45_19505 PF07072 Cell division protein HHJ45_19510 PF03884 DNA gyrase inhibitor YacG HHJ45_19515 PF00293 NUDIX domain HHJ45_19520 PF07516 SecA Wing and Scaffold domain HHJ45_19520 PF07517 SecA DEAD-like domain HHJ45_19520 PF02810 SEC-C motif HHJ45_19520 PF01043 SecA preprotein cross-linking domain HHJ45_19525 PF06558 Secretion monitor precursor protein (SecM) HHJ45_19530 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HHJ45_19535 PF00091 Tubulin/FtsZ family, GTPase domain HHJ45_19535 PF12327 FtsZ family, C-terminal domain HHJ45_19540 PF02491 SHS2 domain inserted in FTSA HHJ45_19545 PF03799 Cell division protein FtsQ HHJ45_19545 PF08478 POTRA domain, FtsQ-type HHJ45_19550 PF07478 D-ala D-ala ligase C-terminus HHJ45_19550 PF01820 D-ala D-ala ligase N-terminus HHJ45_19555 PF02875 Mur ligase family, glutamate ligase domain HHJ45_19555 PF01225 Mur ligase family, catalytic domain HHJ45_19555 PF08245 Mur ligase middle domain HHJ45_19560 PF03033 Glycosyltransferase family 28 N-terminal domain HHJ45_19560 PF04101 Glycosyltransferase family 28 C-terminal domain HHJ45_19565 PF01098 Cell cycle protein HHJ45_19570 PF08245 Mur ligase middle domain HHJ45_19570 PF02875 Mur ligase family, glutamate ligase domain HHJ45_19575 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HHJ45_19575 PF00953 Glycosyl transferase family 4 HHJ45_19580 PF01225 Mur ligase family, catalytic domain HHJ45_19580 PF02875 Mur ligase family, glutamate ligase domain HHJ45_19580 PF08245 Mur ligase middle domain HHJ45_19585 PF08245 Mur ligase middle domain HHJ45_19585 PF01225 Mur ligase family, catalytic domain HHJ45_19585 PF02875 Mur ligase family, glutamate ligase domain HHJ45_19590 PF00905 Penicillin binding protein transpeptidase domain HHJ45_19590 PF03717 Penicillin-binding Protein dimerisation domain HHJ45_19595 PF04999 Cell division protein FtsL HHJ45_19600 PF01795 MraW methylase family HHJ45_19605 PF02381 MraZ protein, putative antitoxin-like HHJ45_19610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ45_19610 PF00356 Bacterial regulatory proteins, lacI family HHJ45_19620 PF10369 Small subunit of acetolactate synthase HHJ45_19625 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ45_19625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_19625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ45_19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_19630 PF03466 LysR substrate binding domain HHJ45_19635 PF08054 Leucine operon leader peptide HHJ45_19640 PF00682 HMGL-like HHJ45_19640 PF08502 LeuA allosteric (dimerisation) domain HHJ45_19645 PF00180 Isocitrate/isopropylmalate dehydrogenase HHJ45_19650 PF00330 Aconitase family (aconitate hydratase) HHJ45_19655 PF00694 Aconitase C-terminal domain HHJ45_19660 PF07690 Major Facilitator Superfamily HHJ45_19670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ45_19670 PF12793 Sugar transport-related sRNA regulator N-term HHJ45_19680 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_19685 PF00005 ABC transporter HHJ45_19690 PF09335 SNARE associated Golgi protein HHJ45_19695 PF12833 Helix-turn-helix domain HHJ45_19695 PF02311 AraC-like ligand binding domain HHJ45_19700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_19705 PF02610 L-arabinose isomerase HHJ45_19705 PF11762 L-arabinose isomerase C-terminal domain HHJ45_19710 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ45_19715 PF03104 DNA polymerase family B, exonuclease domain HHJ45_19715 PF00136 DNA polymerase family B HHJ45_19720 PF00271 Helicase conserved C-terminal domain HHJ45_19720 PF00176 SNF2 family N-terminal domain HHJ45_19720 PF12137 RNA polymerase recycling family C-terminal HHJ45_19720 PF18339 RapA N-terminal Tudor like domain 1 HHJ45_19720 PF18337 RapA N-terminal Tudor like domain HHJ45_19725 PF00849 RNA pseudouridylate synthase HHJ45_19735 PF05099 Tellurite resistance protein TerB HHJ45_19735 PF00226 DnaJ domain HHJ45_19740 PF03968 OstA-like protein HHJ45_19740 PF04453 LPS transport system D HHJ45_19745 PF00639 PPIC-type PPIASE domain HHJ45_19745 PF09312 SurA N-terminal domain HHJ45_19750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HHJ45_19755 PF00398 Ribosomal RNA adenine dimethylase HHJ45_19760 PF04379 ApaG domain HHJ45_19765 PF00149 Calcineurin-like phosphoesterase HHJ45_19770 PF00186 Dihydrofolate reductase HHJ45_19775 PF02254 TrkA-N domain HHJ45_19775 PF00999 Sodium/hydrogen exchanger family HHJ45_19780 PF02525 Flavodoxin-like fold HHJ45_19785 PF00083 Sugar (and other) transporter HHJ45_19795 PF01494 FAD binding domain HHJ45_19800 PF01012 Electron transfer flavoprotein domain HHJ45_19800 PF00766 Electron transfer flavoprotein FAD-binding domain HHJ45_19805 PF01012 Electron transfer flavoprotein domain HHJ45_19825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HHJ45_19825 PF02770 Acyl-CoA dehydrogenase, middle domain HHJ45_19825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HHJ45_19830 PF02515 CoA-transferase family III HHJ45_19835 PF13193 AMP-binding enzyme C-terminal domain HHJ45_19835 PF00501 AMP-binding enzyme HHJ45_19840 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_19845 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_19850 PF07180 CaiF/GrlA transcriptional regulator HHJ45_19855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HHJ45_19855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HHJ45_19855 PF02142 MGS-like domain HHJ45_19860 PF00117 Glutamine amidotransferase class-I HHJ45_19860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HHJ45_19870 PF01156 Inosine-uridine preferring nucleoside hydrolase HHJ45_19875 PF02401 LytB protein HHJ45_19880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ45_19885 PF01252 Signal peptidase (SPase) II HHJ45_19890 PF08264 Anticodon-binding domain of tRNA HHJ45_19890 PF06827 Zinc finger found in FPG and IleRS HHJ45_19890 PF00133 tRNA synthetases class I (I, L, M and V) HHJ45_19895 PF01687 Riboflavin kinase HHJ45_19895 PF06574 FAD synthetase HHJ45_19900 PF10837 Protein of unknown function (DUF2575) HHJ45_19905 PF01649 Ribosomal protein S20 HHJ45_19925 PF03466 LysR substrate binding domain HHJ45_19925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_19930 PF06965 Na+/H+ antiporter 1 HHJ45_19935 PF01848 Hok/gef family HHJ45_19940 PF00226 DnaJ domain HHJ45_19940 PF00684 DnaJ central domain HHJ45_19940 PF01556 DnaJ C terminal domain HHJ45_19945 PF00012 Hsp70 protein HHJ45_19950 PF10807 Protein of unknown function (DUF2541) HHJ45_19955 PF13099 Domain of unknown function (DUF3944) HHJ45_19955 PF03981 Ubiquinol-cytochrome C chaperone HHJ45_19960 PF01184 GPR1/FUN34/yaaH family HHJ45_19965 PF00994 Probable molybdopterin binding domain HHJ45_19970 PF00923 Transaldolase/Fructose-6-phosphate aldolase HHJ45_19975 PF01235 Sodium:alanine symporter family HHJ45_19980 PF03883 Peroxide stress protein YaaA HHJ45_19990 PF10697 Protein of unknown function (DUF2502) HHJ45_19995 PF14821 Threonine synthase N terminus HHJ45_19995 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_20000 PF08544 GHMP kinases C terminal HHJ45_20000 PF00288 GHMP kinases N terminal domain HHJ45_20005 PF13840 ACT domain HHJ45_20005 PF00742 Homoserine dehydrogenase HHJ45_20005 PF01842 ACT domain HHJ45_20005 PF00696 Amino acid kinase family HHJ45_20005 PF03447 Homoserine dehydrogenase, NAD binding domain HHJ45_20010 PF08254 Threonine leader peptide HHJ45_20015 PF00588 SpoU rRNA Methylase family HHJ45_20025 PF00486 Transcriptional regulatory protein, C terminal HHJ45_20025 PF00072 Response regulator receiver domain HHJ45_20030 PF06123 Inner membrane protein CreD HHJ45_20035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_20035 PF00672 HAMP domain HHJ45_20035 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_20040 PF00072 Response regulator receiver domain HHJ45_20040 PF00486 Transcriptional regulatory protein, C terminal HHJ45_20045 PF05981 CreA protein HHJ45_20050 PF12833 Helix-turn-helix domain HHJ45_20050 PF06445 GyrI-like small molecule binding domain HHJ45_20055 PF00300 Histidine phosphatase superfamily (branch 1) HHJ45_20060 PF01931 Protein of unknown function DUF84 HHJ45_20065 PF01371 Trp repressor protein HHJ45_20070 PF14718 Soluble lytic murein transglycosylase L domain HHJ45_20070 PF01464 Transglycosylase SLT domain HHJ45_20075 PF12848 ABC transporter HHJ45_20075 PF00005 ABC transporter HHJ45_20080 PF13521 AAA domain HHJ45_20080 PF01381 Helix-turn-helix HHJ45_20085 PF18073 Rubredoxin metal binding domain HHJ45_20090 PF18429 Domain of unknown function (DUF5609) HHJ45_20095 PF10144 Bacterial virulence factor haemolysin HHJ45_20100 PF03099 Biotin/lipoate A/B protein ligase family HHJ45_20100 PF10437 Bacterial lipoate protein ligase C-terminus HHJ45_20110 PF01048 Phosphorylase superfamily HHJ45_20115 PF01676 Metalloenzyme superfamily HHJ45_20120 PF02885 Glycosyl transferase family, helical bundle domain HHJ45_20120 PF00591 Glycosyl transferase family, a/b domain HHJ45_20120 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HHJ45_20125 PF01791 DeoC/LacD family aldolase HHJ45_20130 PF11230 Protein of unknown function (DUF3029) HHJ45_20135 PF04055 Radical SAM superfamily HHJ45_20140 PF01026 TatD related DNase HHJ45_20145 PF01734 Patatin-like phospholipase HHJ45_20150 PF07043 Protein of unknown function (DUF1328) HHJ45_20155 PF04972 BON domain HHJ45_20160 PF16658 Class II release factor RF3, C-terminal domain HHJ45_20160 PF03144 Elongation factor Tu domain 2 HHJ45_20160 PF00009 Elongation factor Tu GTP binding domain HHJ45_20165 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_20170 PF00583 Acetyltransferase (GNAT) family HHJ45_20175 PF03603 DNA polymerase III psi subunit HHJ45_20180 PF05175 Methyltransferase small domain HHJ45_20180 PF08468 Methyltransferase small domain N-terminal HHJ45_20200 PF07256 Protein of unknown function (DUF1435) HHJ45_20205 PF11575 FhuF 2Fe-2S C-terminal domain HHJ45_20205 PF06276 Ferric iron reductase FhuF-like transporter HHJ45_20210 PF00196 Bacterial regulatory proteins, luxR family HHJ45_20215 PF00196 Bacterial regulatory proteins, luxR family HHJ45_20220 PF06738 Putative threonine/serine exporter HHJ45_20225 PF12821 Threonine/Serine exporter, ThrE HHJ45_20230 PF17948 DnaT DNA-binding domain HHJ45_20235 PF01695 IstB-like ATP binding protein HHJ45_20240 PF10696 Protein of unknown function (DUF2501) HHJ45_20245 PF00884 Sulfatase HHJ45_20250 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_20250 PF00107 Zinc-binding dehydrogenase HHJ45_20255 PF00392 Bacterial regulatory proteins, gntR family HHJ45_20255 PF07729 FCD domain HHJ45_20260 PF07690 Major Facilitator Superfamily HHJ45_20265 PF00672 HAMP domain HHJ45_20265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HHJ45_20265 PF02203 Tar ligand binding domain homologue HHJ45_20270 PF01047 MarR family HHJ45_20275 PF01557 Fumarylacetoacetate (FAA) hydrolase family HHJ45_20280 PF00171 Aldehyde dehydrogenase family HHJ45_20285 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HHJ45_20290 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase HHJ45_20295 PF01557 Fumarylacetoacetate (FAA) hydrolase family HHJ45_20300 PF03328 HpcH/HpaI aldolase/citrate lyase family HHJ45_20305 PF07690 Major Facilitator Superfamily HHJ45_20315 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HHJ45_20315 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HHJ45_20320 PF01613 Flavin reductase like domain HHJ45_20325 PF13722 5TM C-terminal transporter carbon starvation CstA HHJ45_20325 PF02554 Carbon starvation protein CstA HHJ45_20330 PF04328 Selenoprotein, putative HHJ45_20335 PF07683 Cobalamin synthesis protein cobW C-terminal domain HHJ45_20335 PF02492 CobW/HypB/UreG, nucleotide-binding domain HHJ45_20340 PF01804 Penicillin amidase HHJ45_20345 PF06568 Domain of unknown function (DUF1127) HHJ45_20350 PF00155 Aminotransferase class I and II HHJ45_20350 PF00392 Bacterial regulatory proteins, gntR family HHJ45_20355 PF04754 Putative transposase, YhgA-like HHJ45_20360 PF07690 Major Facilitator Superfamily HHJ45_20365 PF04286 Protein of unknown function (DUF445) HHJ45_20370 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HHJ45_20375 PF01869 BadF/BadG/BcrA/BcrD ATPase family HHJ45_20380 PF11823 Protein of unknown function (DUF3343) HHJ45_20385 PF06977 SdiA-regulated HHJ45_20390 PF06779 Uncharacterised MFS-type transporter YbfB HHJ45_20395 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family HHJ45_20400 PF07670 Nucleoside recognition HHJ45_20405 PF07670 Nucleoside recognition HHJ45_20410 PF01979 Amidohydrolase family HHJ45_20415 PF03466 LysR substrate binding domain HHJ45_20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_20420 PF04965 Gene 25-like lysozyme HHJ45_20430 PF10887 Protein of unknown function (DUF2686) HHJ45_20435 PF07729 FCD domain HHJ45_20435 PF00392 Bacterial regulatory proteins, gntR family HHJ45_20440 PF08125 Mannitol dehydrogenase C-terminal domain HHJ45_20440 PF01232 Mannitol dehydrogenase Rossmann domain HHJ45_20445 PF03786 D-mannonate dehydratase (UxuA) HHJ45_20450 PF02447 GntP family permease HHJ45_20455 PF00419 Fimbrial protein HHJ45_20455 PF09160 FimH, mannose binding HHJ45_20465 PF00419 Fimbrial protein HHJ45_20470 PF13954 PapC N-terminal domain HHJ45_20470 PF00577 Outer membrane usher protein HHJ45_20470 PF13953 PapC C-terminal domain HHJ45_20475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_20475 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_20480 PF00419 Fimbrial protein HHJ45_20485 PF00419 Fimbrial protein HHJ45_20490 PF00589 Phage integrase family HHJ45_20495 PF00589 Phage integrase family HHJ45_20500 PF06178 Oligogalacturonate-specific porin protein (KdgM) HHJ45_20510 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase HHJ45_20605 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_20605 PF00107 Zinc-binding dehydrogenase HHJ45_20610 PF05872 Bacterial protein of unknown function (DUF853) HHJ45_20615 PF03739 Lipopolysaccharide export system permease LptF/LptG HHJ45_20620 PF03739 Lipopolysaccharide export system permease LptF/LptG HHJ45_20625 PF00883 Cytosol aminopeptidase family, catalytic domain HHJ45_20625 PF02789 Cytosol aminopeptidase family, N-terminal domain HHJ45_20630 PF04364 DNA polymerase III chi subunit, HolC HHJ45_20635 PF00133 tRNA synthetases class I (I, L, M and V) HHJ45_20635 PF08264 Anticodon-binding domain of tRNA HHJ45_20635 PF10458 Valyl tRNA synthetase tRNA binding arm HHJ45_20645 PF00583 Acetyltransferase (GNAT) family HHJ45_20650 PF06877 Regulator of ribonuclease activity B HHJ45_20655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HHJ45_20655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HHJ45_20670 PF04074 YhcH/YjgK/YiaL HHJ45_20675 PF00440 Bacterial regulatory proteins, tetR family HHJ45_20685 PF01042 Endoribonuclease L-PSP HHJ45_20690 PF08052 PyrBI operon leader peptide HHJ45_20695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HHJ45_20695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HHJ45_20700 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HHJ45_20700 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HHJ45_20705 PF01042 Endoribonuclease L-PSP HHJ45_20715 PF00690 Cation transporter/ATPase, N-terminus HHJ45_20715 PF00689 Cation transporting ATPase, C-terminus HHJ45_20720 PF17059 MgtA leader peptide HHJ45_20725 PF00356 Bacterial regulatory proteins, lacI family HHJ45_20730 PF00367 phosphotransferase system, EIIB HHJ45_20730 PF02378 Phosphotransferase system, EIIC HHJ45_20735 PF11941 Domain of unknown function (DUF3459) HHJ45_20735 PF00128 Alpha amylase, catalytic domain HHJ45_20740 PF03477 ATP cone domain HHJ45_20740 PF13597 Anaerobic ribonucleoside-triphosphate reductase HHJ45_20750 PF07361 Cytochrome b562 HHJ45_20755 PF01523 Putative modulator of DNA gyrase HHJ45_20760 PF04751 Protein of unknown function (DUF615) HHJ45_20765 PF01225 Mur ligase family, catalytic domain HHJ45_20765 PF02875 Mur ligase family, glutamate ligase domain HHJ45_20765 PF08245 Mur ligase middle domain HHJ45_20770 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HHJ45_20775 PF02653 Branched-chain amino acid transport system / permease component HHJ45_20780 PF02653 Branched-chain amino acid transport system / permease component HHJ45_20785 PF00005 ABC transporter HHJ45_20790 PF13407 Periplasmic binding protein domain HHJ45_20795 PF00719 Inorganic pyrophosphatase HHJ45_20800 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HHJ45_20805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HHJ45_20810 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HHJ45_20815 PF04357 TamB, inner membrane protein subunit of TAM complex HHJ45_20820 PF17243 POTRA domain TamA domain 1 HHJ45_20820 PF07244 Surface antigen variable number repeat HHJ45_20820 PF01103 Surface antigen HHJ45_20825 PF01625 Peptide methionine sulfoxide reductase HHJ45_20830 PF00571 CBS domain HHJ45_20830 PF03471 Transporter associated domain HHJ45_20830 PF01595 Cyclin M transmembrane N-terminal domain HHJ45_20835 PF06526 Protein of unknown function (DUF1107) HHJ45_20840 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HHJ45_20845 PF00459 Inositol monophosphatase family HHJ45_20850 PF00149 Calcineurin-like phosphoesterase HHJ45_20850 PF02872 5'-nucleotidase, C-terminal domain HHJ45_20855 PF01638 HxlR-like helix-turn-helix HHJ45_20860 PF05368 NmrA-like family HHJ45_20865 PF00892 EamA-like transporter family HHJ45_20870 PF04405 Domain of Unknown function (DUF542) HHJ45_20870 PF01814 Hemerythrin HHE cation binding domain HHJ45_20875 PF00324 Amino acid permease HHJ45_20880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ45_20880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HHJ45_20885 PF04225 Opacity-associated protein A LysM-like domain HHJ45_20885 PF08525 Opacity-associated protein A N-terminal motif HHJ45_20890 PF17938 Tetracyclin repressor-like, C-terminal domain HHJ45_20905 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_20910 PF01144 Coenzyme A transferase HHJ45_20915 PF00890 FAD binding domain HHJ45_20915 PF02910 Fumarate reductase flavoprotein C-term HHJ45_20920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HHJ45_20925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HHJ45_20930 PF03480 Bacterial extracellular solute-binding protein, family 7 HHJ45_20935 PF01281 Ribosomal protein L9, N-terminal domain HHJ45_20935 PF03948 Ribosomal protein L9, C-terminal domain HHJ45_20940 PF01084 Ribosomal protein S18 HHJ45_20945 PF00436 Single-strand binding protein family HHJ45_20950 PF01250 Ribosomal protein S6 HHJ45_20955 PF07338 Protein of unknown function (DUF1471) HHJ45_20960 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ45_20965 PF01261 Xylose isomerase-like TIM barrel HHJ45_20970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HHJ45_20975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_20980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_20985 PF03611 PTS system sugar-specific permease component HHJ45_20995 PF08220 DeoR-like helix-turn-helix domain HHJ45_20995 PF00455 DeoR C terminal sensor domain HHJ45_21000 PF00326 Prolyl oligopeptidase family HHJ45_21005 PF07338 Protein of unknown function (DUF1471) HHJ45_21010 PF07338 Protein of unknown function (DUF1471) HHJ45_21015 PF02770 Acyl-CoA dehydrogenase, middle domain HHJ45_21015 PF18158 Adaptive response protein AidB N-terminal domain HHJ45_21015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HHJ45_21020 PF03738 Glutathionylspermidine synthase preATP-grasp HHJ45_21025 PF06693 Protein of unknown function (DUF1190) HHJ45_21030 PF03994 Domain of Unknown Function (DUF350) HHJ45_21035 PF10679 Protein of unknown function (DUF2491) HHJ45_21040 PF04012 PspA/IM30 family HHJ45_21045 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) HHJ45_21050 PF08032 RNA 2'-O ribose methyltransferase substrate binding HHJ45_21050 PF00588 SpoU rRNA Methylase family HHJ45_21055 PF08206 Ribonuclease B OB domain HHJ45_21055 PF00575 S1 RNA binding domain HHJ45_21055 PF17876 Cold shock domain HHJ45_21055 PF08461 Ribonuclease R winged-helix domain HHJ45_21055 PF00773 RNB domain HHJ45_21060 PF02082 Transcriptional regulator HHJ45_21065 PF00709 Adenylosuccinate synthetase HHJ45_21070 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HHJ45_21075 PF01145 SPFH domain / Band 7 family HHJ45_21080 PF12221 Bacterial membrane protein N terminal HHJ45_21080 PF01145 SPFH domain / Band 7 family HHJ45_21085 PF01926 50S ribosome-binding GTPase HHJ45_21085 PF13167 GTP-binding GTPase N-terminal HHJ45_21085 PF16360 GTP-binding GTPase Middle Region HHJ45_21090 PF17209 Hfq protein HHJ45_21100 PF08676 MutL C terminal dimerisation domain HHJ45_21100 PF01119 DNA mismatch repair protein, C-terminal domain HHJ45_21105 PF01520 N-acetylmuramoyl-L-alanine amidase HHJ45_21110 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HHJ45_21115 PF01256 Carbohydrate kinase HHJ45_21115 PF03853 YjeF-related protein N-terminus HHJ45_21120 PF08331 Domain of unknown function (DUF1730) HHJ45_21145 PF00929 Exonuclease HHJ45_21150 PF03193 RsgA GTPase HHJ45_21155 PF02666 Phosphatidylserine decarboxylase HHJ45_21160 PF00924 Mechanosensitive ion channel HHJ45_21160 PF12794 Mechanosensitive ion channel inner membrane domain 1 HHJ45_21160 PF12795 Mechanosensitive ion channel porin domain HHJ45_21165 PF13520 Amino acid permease HHJ45_21170 PF00152 tRNA synthetases class II (D, K and N) HHJ45_21175 PF00890 FAD binding domain HHJ45_21175 PF02910 Fumarate reductase flavoprotein C-term HHJ45_21180 PF13085 2Fe-2S iron-sulfur cluster binding domain HHJ45_21180 PF13183 4Fe-4S dicluster domain HHJ45_21185 PF02300 Fumarate reductase subunit C HHJ45_21190 PF02313 Fumarate reductase subunit D HHJ45_21195 PF00144 Beta-lactamase HHJ45_21200 PF08212 Lipocalin-like domain HHJ45_21205 PF00893 Small Multidrug Resistance protein HHJ45_21210 PF08085 Entericidin EcnA/B family HHJ45_21215 PF08085 Entericidin EcnA/B family HHJ45_21220 PF01132 Elongation factor P (EF-P) OB domain HHJ45_21220 PF09285 Elongation factor P, C-terminal HHJ45_21220 PF08207 Elongation factor P (EF-P) KOW-like domain HHJ45_21225 PF04055 Radical SAM superfamily HHJ45_21230 PF15922 YjeJ-like HHJ45_21235 PF13698 Domain of unknown function (DUF4156) HHJ45_21240 PF00118 TCP-1/cpn60 chaperonin family HHJ45_21245 PF00166 Chaperonin 10 Kd subunit HHJ45_21250 PF13520 Amino acid permease HHJ45_21255 PF04186 FxsA cytoplasmic membrane protein HHJ45_21260 PF10415 Fumarase C C-terminus HHJ45_21260 PF00206 Lyase HHJ45_21265 PF03605 Anaerobic c4-dicarboxylate membrane transporter HHJ45_21270 PF03091 CutA1 divalent ion tolerance protein HHJ45_21275 PF11412 Disulphide bond corrector protein DsbC HHJ45_21275 PF02683 Cytochrome C biogenesis protein transmembrane region HHJ45_21300 PF05775 Enterobacteria AfaD invasin protein HHJ45_21305 PF00577 Outer membrane usher protein HHJ45_21305 PF13954 PapC N-terminal domain HHJ45_21305 PF13953 PapC C-terminal domain HHJ45_21310 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_21310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_21315 PF03333 Adhesin biosynthesis transcription regulatory protein HHJ45_21320 PF04703 FaeA-like protein HHJ45_21335 PF01047 MarR family HHJ45_21350 PF03627 PapG carbohydrate binding domain HHJ45_21350 PF03628 PapG chaperone-binding domain HHJ45_21355 PF00419 Fimbrial protein HHJ45_21360 PF00419 Fimbrial protein HHJ45_21365 PF00419 Fimbrial protein HHJ45_21370 PF14855 Pilus-assembly fibrillin subunit, chaperone HHJ45_21375 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_21375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_21380 PF13954 PapC N-terminal domain HHJ45_21380 PF13953 PapC C-terminal domain HHJ45_21380 PF00577 Outer membrane usher protein HHJ45_21390 PF00419 Fimbrial protein HHJ45_21395 PF03333 Adhesin biosynthesis transcription regulatory protein HHJ45_21400 PF04703 FaeA-like protein HHJ45_21420 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HHJ45_21495 PF00665 Integrase core domain HHJ45_21495 PF02796 Helix-turn-helix domain of resolvase HHJ45_21500 PF01695 IstB-like ATP binding protein HHJ45_21520 PF05717 IS66 Orf2 like protein HHJ45_21525 PF13817 IS66 C-terminal element HHJ45_21525 PF13007 Transposase C of IS166 homeodomain HHJ45_21525 PF13005 zinc-finger binding domain of transposase IS66 HHJ45_21525 PF03050 Transposase IS66 family HHJ45_21560 PF01926 50S ribosome-binding GTPase HHJ45_21565 PF08220 DeoR-like helix-turn-helix domain HHJ45_21565 PF13280 WYL domain HHJ45_21580 PF06067 Domain of unknown function (DUF932) HHJ45_21585 PF03230 Antirestriction protein HHJ45_21590 PF04002 RadC-like JAB domain HHJ45_21595 PF06174 Protein of unknown function (DUF987) HHJ45_21600 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HHJ45_21605 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HHJ45_21615 PF06755 CbtA_toxin of type IV toxin-antitoxin system HHJ45_21635 PF00486 Transcriptional regulatory protein, C terminal HHJ45_21635 PF18500 CadC C-terminal domain 1 HHJ45_21640 PF13520 Amino acid permease HHJ45_21645 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HHJ45_21645 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HHJ45_21645 PF01276 Orn/Lys/Arg decarboxylase, major domain HHJ45_21650 PF00854 POT family HHJ45_21655 PF01336 OB-fold nucleic acid binding domain HHJ45_21655 PF00152 tRNA synthetases class II (D, K and N) HHJ45_21660 PF10753 Toxin GhoT_OrtT HHJ45_21665 PF11080 Endoribonuclease GhoS HHJ45_21670 PF14542 GCN5-related N-acetyl-transferase HHJ45_21675 PF06902 Divergent 4Fe-4S mono-cluster HHJ45_21680 PF17203 Single cache domain 3 HHJ45_21680 PF00989 PAS fold HHJ45_21680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HHJ45_21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_21685 PF00072 Response regulator receiver domain HHJ45_21690 PF03605 Anaerobic c4-dicarboxylate membrane transporter HHJ45_21695 PF05683 Fumarase C-terminus HHJ45_21695 PF05681 Fumarate hydratase (Fumerase) HHJ45_21700 PF09997 Predicted membrane protein (DUF2238) HHJ45_21710 PF11975 Family 4 glycosyl hydrolase C-terminal domain HHJ45_21710 PF02056 Family 4 glycosyl hydrolase HHJ45_21715 PF12833 Helix-turn-helix domain HHJ45_21720 PF01276 Orn/Lys/Arg decarboxylase, major domain HHJ45_21720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HHJ45_21720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HHJ45_21725 PF12833 Helix-turn-helix domain HHJ45_21730 PF13520 Amino acid permease HHJ45_21735 PF00884 Sulfatase HHJ45_21735 PF08019 Phosphoethanolamine transferase EptA/EptB HHJ45_21740 PF00486 Transcriptional regulatory protein, C terminal HHJ45_21740 PF00072 Response regulator receiver domain HHJ45_21745 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_21745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_21755 PF08946 Osmosensory transporter coiled coil HHJ45_21755 PF00083 Sugar (and other) transporter HHJ45_21760 PF13990 YjcZ-like protein HHJ45_21765 PF00350 Dynamin family HHJ45_21770 PF03831 PhnA domain HHJ45_21770 PF08274 PhnA Zinc-Ribbon HHJ45_21775 PF06983 3-demethylubiquinone-9 3-methyltransferase HHJ45_21780 PF00005 ABC transporter HHJ45_21790 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_21795 PF00392 Bacterial regulatory proteins, gntR family HHJ45_21795 PF07702 UTRA domain HHJ45_21800 PF06754 Phosphonate metabolism protein PhnG HHJ45_21805 PF05845 Bacterial phosphonate metabolism protein (PhnH) HHJ45_21810 PF05861 Bacterial phosphonate metabolism protein (PhnI) HHJ45_21815 PF06007 Phosphonate metabolism protein PhnJ HHJ45_21820 PF00005 ABC transporter HHJ45_21825 PF00005 ABC transporter HHJ45_21830 PF07969 Amidohydrolase family HHJ45_21840 PF00583 Acetyltransferase (GNAT) family HHJ45_21845 PF12706 Beta-lactamase superfamily domain HHJ45_21855 PF02502 Ribose/Galactose Isomerase HHJ45_21860 PF00753 Metallo-beta-lactamase superfamily HHJ45_21860 PF14863 Alkyl sulfatase dimerisation HHJ45_21860 PF14864 Alkyl sulfatase C-terminal HHJ45_21865 PF17090 Uncharacterised protein family HHJ45_21870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_21870 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_21875 PF04632 Fusaric acid resistance protein family HHJ45_21880 PF02321 Outer membrane efflux protein HHJ45_21890 PF08238 Sel1 repeat HHJ45_21895 PF00375 Sodium:dicarboxylate symporter family HHJ45_21905 PF03918 Cytochrome C biogenesis protein HHJ45_21910 PF01578 Cytochrome C assembly protein HHJ45_21910 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HHJ45_21915 PF03916 Polysulphide reductase, NrfD HHJ45_21920 PF13247 4Fe-4S dicluster domain HHJ45_21920 PF00037 4Fe-4S binding domain HHJ45_21925 PF13435 Cytochrome c554 and c-prime HHJ45_21925 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HHJ45_21930 PF02335 Cytochrome c552 HHJ45_21935 PF13193 AMP-binding enzyme C-terminal domain HHJ45_21935 PF16177 Acetyl-coenzyme A synthetase N-terminus HHJ45_21935 PF00501 AMP-binding enzyme HHJ45_21940 PF04341 Protein of unknown function, DUF485 HHJ45_21945 PF00474 Sodium:solute symporter family HHJ45_21955 PF00999 Sodium/hydrogen exchanger family HHJ45_21960 PF00860 Permease family HHJ45_21965 PF00376 MerR family regulatory protein HHJ45_21965 PF09278 MerR, DNA binding HHJ45_21970 PF12833 Helix-turn-helix domain HHJ45_21975 PF12792 CSS motif domain associated with EAL HHJ45_21975 PF00563 EAL domain HHJ45_21980 PF15940 Family of unknown function HHJ45_21985 PF00436 Single-strand binding protein family HHJ45_21990 PF00005 ABC transporter HHJ45_21990 PF17760 UvrA interaction domain HHJ45_21990 PF17755 UvrA DNA-binding domain HHJ45_21995 PF04237 YjbR HHJ45_22000 PF01894 Uncharacterised protein family UPF0047 HHJ45_22005 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HHJ45_22020 PF00155 Aminotransferase class I and II HHJ45_22025 PF00842 Alanine racemase, C-terminal domain HHJ45_22025 PF01168 Alanine racemase, N-terminal domain HHJ45_22030 PF03796 DnaB-like helicase C terminal domain HHJ45_22030 PF00772 DnaB-like helicase N terminal domain HHJ45_22035 PF00107 Zinc-binding dehydrogenase HHJ45_22035 PF08240 Alcohol dehydrogenase GroES-like domain HHJ45_22040 PF09583 Phage shock protein G (Phageshock_PspG) HHJ45_22045 PF01207 Dihydrouridine synthase (Dus) HHJ45_22055 PF01475 Ferric uptake regulator family HHJ45_22060 PF05532 CsbD-like HHJ45_22065 PF01554 MatE HHJ45_22070 PF00717 Peptidase S24-like HHJ45_22070 PF01726 LexA DNA binding domain HHJ45_22075 PF01219 Prokaryotic diacylglycerol kinase HHJ45_22080 PF01553 Acyltransferase HHJ45_22085 PF01040 UbiA prenyltransferase family HHJ45_22090 PF04345 Chorismate lyase HHJ45_22100 PF07148 Maltose operon periplasmic protein precursor (MalM) HHJ45_22105 PF02264 LamB porin HHJ45_22110 PF17912 MalK OB fold domain HHJ45_22110 PF00005 ABC transporter HHJ45_22115 PF01547 Bacterial extracellular solute-binding protein HHJ45_22120 PF14785 Maltose transport system permease protein MalF P2 domain HHJ45_22120 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_22125 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_22130 PF00083 Sugar (and other) transporter HHJ45_22135 PF06146 Phosphate-starvation-inducible E HHJ45_22140 PF17089 Uncharacterised protein family HHJ45_22145 PF06082 Exopolysaccharide biosynthesis protein YbjH HHJ45_22150 PF06251 Capsule biosynthesis GfcC HHJ45_22155 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HHJ45_22160 PF11106 Exopolysaccharide production protein YjbE HHJ45_22165 PF00342 Phosphoglucose isomerase HHJ45_22170 PF01842 ACT domain HHJ45_22170 PF00696 Amino acid kinase family HHJ45_22175 PF06414 Zeta toxin HHJ45_22180 PF10127 RNA repair pathway DNA polymerase beta family HHJ45_22190 PF11656 YjbD family (DUF3811) HHJ45_22195 PF00849 RNA pseudouridylate synthase HHJ45_22195 PF01479 S4 domain HHJ45_22200 PF03575 Peptidase family S51 HHJ45_22205 PF02690 Na+/Pi-cotransporter HHJ45_22210 PF00809 Pterin binding enzyme HHJ45_22210 PF02310 B12 binding domain HHJ45_22210 PF02607 B12 binding domain HHJ45_22210 PF02965 Vitamin B12 dependent methionine synthase, activation domain HHJ45_22210 PF02574 Homocysteine S-methyltransferase HHJ45_22215 PF09339 IclR helix-turn-helix domain HHJ45_22215 PF01614 Bacterial transcriptional regulator HHJ45_22225 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HHJ45_22230 PF00463 Isocitrate lyase family HHJ45_22235 PF01274 Malate synthase HHJ45_22240 PF04204 Homoserine O-succinyltransferase HHJ45_22245 PF13673 Acetyltransferase (GNAT) domain HHJ45_22270 PF01808 AICARFT/IMPCHase bienzyme HHJ45_22270 PF02142 MGS-like domain HHJ45_22275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HHJ45_22275 PF02843 Phosphoribosylglycinamide synthetase, C domain HHJ45_22275 PF02844 Phosphoribosylglycinamide synthetase, N domain HHJ45_22280 PF02954 Bacterial regulatory protein, Fis family HHJ45_22280 PF00072 Response regulator receiver domain HHJ45_22280 PF00158 Sigma-54 interaction domain HHJ45_22285 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_22290 PF13801 Heavy-metal resistance HHJ45_22295 PF07356 Protein of unknown function (DUF1481) HHJ45_22300 PF00216 Bacterial DNA-binding protein HHJ45_22305 PF04222 Protein of unknown function (DUF416) HHJ45_22310 PF04493 Endonuclease V HHJ45_22315 PF01208 Uroporphyrinogen decarboxylase (URO-D) HHJ45_22320 PF00293 NUDIX domain HHJ45_22320 PF09297 NADH pyrophosphatase zinc ribbon domain HHJ45_22325 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HHJ45_22330 PF13667 ThiC-associated domain HHJ45_22330 PF01964 Radical SAM ThiC family HHJ45_22335 PF02581 Thiamine monophosphate synthase HHJ45_22340 PF00899 ThiF family HHJ45_22345 PF02597 ThiS family HHJ45_22350 PF05690 Thiazole biosynthesis protein ThiG HHJ45_22355 PF06968 Biotin and Thiamin Synthesis associated domain HHJ45_22355 PF04055 Radical SAM superfamily HHJ45_22365 PF04997 RNA polymerase Rpb1, domain 1 HHJ45_22365 PF00623 RNA polymerase Rpb1, domain 2 HHJ45_22365 PF04983 RNA polymerase Rpb1, domain 3 HHJ45_22365 PF05000 RNA polymerase Rpb1, domain 4 HHJ45_22365 PF04998 RNA polymerase Rpb1, domain 5 HHJ45_22370 PF10385 RNA polymerase beta subunit external 1 domain HHJ45_22370 PF04561 RNA polymerase Rpb2, domain 2 HHJ45_22370 PF00562 RNA polymerase Rpb2, domain 6 HHJ45_22370 PF04563 RNA polymerase beta subunit HHJ45_22370 PF04560 RNA polymerase Rpb2, domain 7 HHJ45_22370 PF04565 RNA polymerase Rpb2, domain 3 HHJ45_22375 PF00542 Ribosomal protein L7/L12 C-terminal domain HHJ45_22375 PF16320 Ribosomal protein L7/L12 dimerisation domain HHJ45_22380 PF00466 Ribosomal protein L10 HHJ45_22385 PF00687 Ribosomal protein L1p/L10e family HHJ45_22390 PF03946 Ribosomal protein L11, N-terminal domain HHJ45_22390 PF00298 Ribosomal protein L11, RNA binding domain HHJ45_22395 PF02357 Transcription termination factor nusG HHJ45_22395 PF00467 KOW motif HHJ45_22400 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HHJ45_22405 PF00009 Elongation factor Tu GTP binding domain HHJ45_22405 PF03144 Elongation factor Tu domain 2 HHJ45_22405 PF03143 Elongation factor Tu C-terminal domain HHJ45_22430 PF00485 Phosphoribulokinase / Uridine kinase family HHJ45_22435 PF08279 HTH domain HHJ45_22435 PF03099 Biotin/lipoate A/B protein ligase family HHJ45_22435 PF02237 Biotin protein ligase C terminal domain HHJ45_22440 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HHJ45_22440 PF01565 FAD binding domain HHJ45_22465 PF01177 Asp/Glu/Hydantoin racemase HHJ45_22470 PF00593 TonB dependent receptor HHJ45_22470 PF07715 TonB-dependent Receptor Plug Domain HHJ45_22475 PF05958 tRNA (Uracil-5-)-methyltransferase HHJ45_22480 PF07226 Protein of unknown function (DUF1422) HHJ45_22485 PF00440 Bacterial regulatory proteins, tetR family HHJ45_22490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HHJ45_22490 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_22495 PF03466 LysR substrate binding domain HHJ45_22495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_22500 PF07690 Major Facilitator Superfamily HHJ45_22505 PF13378 Enolase C-terminal domain-like HHJ45_22505 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HHJ45_22510 PF00206 Lyase HHJ45_22510 PF14698 Argininosuccinate lyase C-terminal HHJ45_22515 PF00696 Amino acid kinase family HHJ45_22520 PF02774 Semialdehyde dehydrogenase, dimerisation domain HHJ45_22520 PF01118 Semialdehyde dehydrogenase, NAD binding domain HHJ45_22525 PF01546 Peptidase family M20/M25/M40 HHJ45_22525 PF07687 Peptidase dimerisation domain HHJ45_22530 PF00311 Phosphoenolpyruvate carboxylase HHJ45_22535 PF00884 Sulfatase HHJ45_22540 PF12833 Helix-turn-helix domain HHJ45_22545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_22550 PF04055 Radical SAM superfamily HHJ45_22555 PF01228 Glycine radical HHJ45_22555 PF02901 Pyruvate formate lyase-like HHJ45_22560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_22570 PF05524 PEP-utilising enzyme, N-terminal HHJ45_22570 PF00391 PEP-utilising enzyme, mobile domain HHJ45_22570 PF02896 PEP-utilising enzyme, TIM barrel domain HHJ45_22570 PF00381 PTS HPr component phosphorylation site HHJ45_22570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_22575 PF00923 Transaldolase/Fructose-6-phosphate aldolase HHJ45_22580 PF00465 Iron-containing alcohol dehydrogenase HHJ45_22585 PF06940 Domain of unknown function (DUF1287) HHJ45_22590 PF00892 EamA-like transporter family HHJ45_22595 PF00141 Peroxidase HHJ45_22600 PF02219 Methylenetetrahydrofolate reductase HHJ45_22605 PF00696 Amino acid kinase family HHJ45_22605 PF03447 Homoserine dehydrogenase, NAD binding domain HHJ45_22605 PF00742 Homoserine dehydrogenase HHJ45_22610 PF01053 Cys/Met metabolism PLP-dependent enzyme HHJ45_22615 PF01340 Met Apo-repressor, MetJ HHJ45_22620 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HHJ45_22660 PF01197 Ribosomal protein L31 HHJ45_22665 PF18074 Primosomal protein N C-terminal domain HHJ45_22665 PF17764 3′ DNA-binding domain (3′BD) HHJ45_22665 PF00271 Helicase conserved C-terminal domain HHJ45_22665 PF00270 DEAD/DEAH box helicase HHJ45_22665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HHJ45_22670 PF00356 Bacterial regulatory proteins, lacI family HHJ45_22675 PF05036 Sporulation related domain HHJ45_22680 PF00227 Proteasome subunit HHJ45_22685 PF07724 AAA domain (Cdc48 subfamily) HHJ45_22685 PF00004 ATPase family associated with various cellular activities (AAA) HHJ45_22685 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ45_22690 PF01040 UbiA prenyltransferase family HHJ45_22695 PF03737 Aldolase/RraA HHJ45_22700 PF06005 Cell division protein ZapB HHJ45_22705 PF00230 Major intrinsic protein HHJ45_22710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_22710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ45_22715 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HHJ45_22720 PF00970 Oxidoreductase FAD-binding domain HHJ45_22720 PF00175 Oxidoreductase NAD-binding domain HHJ45_22725 PF00582 Universal stress protein family HHJ45_22730 PF04175 Protein of unknown function (DUF406) HHJ45_22735 PF05656 Protein of unknown function (DUF805) HHJ45_22740 PF07305 Protein of unknown function (DUF1454) HHJ45_22745 PF00121 Triosephosphate isomerase HHJ45_22750 PF02611 CDP-diacylglycerol pyrophosphatase HHJ45_22760 PF00365 Phosphofructokinase HHJ45_22765 PF01545 Cation efflux family HHJ45_22765 PF16916 Dimerisation domain of Zinc Transporter HHJ45_22770 PF07813 LTXXQ motif family protein HHJ45_22775 PF00072 Response regulator receiver domain HHJ45_22775 PF00486 Transcriptional regulatory protein, C terminal HHJ45_22780 PF00672 HAMP domain HHJ45_22780 PF16527 Two-component sensor protein CpxA, periplasmic domain HHJ45_22780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_22780 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_22785 PF03475 3-alpha domain HHJ45_22785 PF03473 MOSC domain HHJ45_22790 PF03812 2-keto-3-deoxygluconate permease HHJ45_22805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HHJ45_22805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HHJ45_22810 PF06379 L-rhamnose-proton symport protein (RhaT) HHJ45_22815 PF02311 AraC-like ligand binding domain HHJ45_22815 PF12833 Helix-turn-helix domain HHJ45_22820 PF12833 Helix-turn-helix domain HHJ45_22820 PF02311 AraC-like ligand binding domain HHJ45_22825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ45_22825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ45_22830 PF06134 L-rhamnose isomerase (RhaA) HHJ45_22835 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ45_22840 PF05336 L-rhamnose mutarotase HHJ45_22845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_22850 PF02378 Phosphotransferase system, EIIC HHJ45_22850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ45_22855 PF05343 M42 glutamyl aminopeptidase HHJ45_22860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ45_22860 PF08279 HTH domain HHJ45_22865 PF12889 Protein of unknown function (DUF3829) HHJ45_22870 PF02634 FdhD/NarQ family HHJ45_22880 PF13247 4Fe-4S dicluster domain HHJ45_22880 PF09163 Formate dehydrogenase N, transmembrane HHJ45_22885 PF01292 Prokaryotic cytochrome b561 HHJ45_22890 PF04216 Protein involved in formate dehydrogenase formation HHJ45_22900 PF01402 Ribbon-helix-helix protein, copG family HHJ45_22910 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system HHJ45_22915 PF07859 alpha/beta hydrolase fold HHJ45_22920 PF00583 Acetyltransferase (GNAT) family HHJ45_22920 PF09500 Putative thioesterase (yiiD_Cterm) HHJ45_22925 PF02580 D-Tyr-tRNA(Tyr) deacylase HHJ45_22930 PF03631 Virulence factor BrkB HHJ45_22935 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_22940 PF00455 DeoR C terminal sensor domain HHJ45_22940 PF08220 DeoR-like helix-turn-helix domain HHJ45_22945 PF00294 pfkB family carbohydrate kinase HHJ45_22950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HHJ45_22950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HHJ45_22955 PF01791 DeoC/LacD family aldolase HHJ45_22965 PF01263 Aldose 1-epimerase HHJ45_22970 PF01055 Glycosyl hydrolases family 31 HHJ45_22985 PF06178 Oligogalacturonate-specific porin protein (KdgM) HHJ45_22990 PF07690 Major Facilitator Superfamily HHJ45_22995 PF01261 Xylose isomerase-like TIM barrel HHJ45_23000 PF07702 UTRA domain HHJ45_23000 PF00392 Bacterial regulatory proteins, gntR family HHJ45_23010 PF00120 Glutamine synthetase, catalytic domain HHJ45_23010 PF03951 Glutamine synthetase, beta-Grasp domain HHJ45_23015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ45_23015 PF00512 His Kinase A (phospho-acceptor) domain HHJ45_23015 PF00989 PAS fold HHJ45_23020 PF00158 Sigma-54 interaction domain HHJ45_23020 PF00072 Response regulator receiver domain HHJ45_23020 PF02954 Bacterial regulatory protein, Fis family HHJ45_23030 PF04055 Radical SAM superfamily HHJ45_23030 PF06969 HemN C-terminal domain HHJ45_23035 PF04220 Der GTPase activator (YihI) HHJ45_23040 PF01926 50S ribosome-binding GTPase HHJ45_23045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HHJ45_23045 PF00476 DNA polymerase family A HHJ45_23045 PF01367 5'-3' exonuclease, C-terminal SAM fold HHJ45_23045 PF01612 3'-5' exonuclease HHJ45_23050 PF01553 Acyltransferase HHJ45_23075 PF01636 Phosphotransferase enzyme family HHJ45_23080 PF06288 Protein of unknown function (DUF1040) HHJ45_23085 PF12804 MobA-like NTP transferase domain HHJ45_23090 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HHJ45_23120 PF12724 Flavodoxin domain HHJ45_23125 PF02386 Cation transport protein HHJ45_23130 PF09186 Domain of unknown function (DUF1949) HHJ45_23130 PF01205 Uncharacterized protein family UPF0029 HHJ45_23135 PF00557 Metallopeptidase family M24 HHJ45_23140 PF00378 Enoyl-CoA hydratase/isomerase HHJ45_23140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HHJ45_23140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HHJ45_23145 PF02803 Thiolase, C-terminal domain HHJ45_23145 PF00108 Thiolase, N-terminal domain HHJ45_23150 PF00970 Oxidoreductase FAD-binding domain HHJ45_23150 PF00175 Oxidoreductase NAD-binding domain HHJ45_23155 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HHJ45_23160 PF02357 Transcription termination factor nusG HHJ45_23165 PF01026 TatD related DNase HHJ45_23170 PF00902 Sec-independent protein translocase protein (TatC) HHJ45_23180 PF02416 mttA/Hcf106 family HHJ45_23185 PF03109 ABC1 family HHJ45_23190 PF02036 SCP-2 sterol transfer family HHJ45_23195 PF01209 ubiE/COQ5 methyltransferase family HHJ45_23200 PF02646 RmuC family HHJ45_23205 PF01048 Phosphorylase superfamily HHJ45_23210 PF01738 Dienelactone hydrolase family HHJ45_23215 PF08267 Cobalamin-independent synthase, N-terminal domain HHJ45_23215 PF01717 Cobalamin-independent synthase, Catalytic domain HHJ45_23220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_23220 PF03466 LysR substrate binding domain HHJ45_23225 PF00892 EamA-like transporter family HHJ45_23235 PF12146 Serine aminopeptidase, S33 HHJ45_23240 PF01810 LysE type translocator HHJ45_23245 PF01810 LysE type translocator HHJ45_23250 PF00270 DEAD/DEAH box helicase HHJ45_23250 PF00271 Helicase conserved C-terminal domain HHJ45_23250 PF00570 HRDC domain HHJ45_23250 PF16124 RecQ zinc-binding HHJ45_23250 PF09382 RQC domain HHJ45_23255 PF02253 Phospholipase A1 HHJ45_23260 PF03061 Thioesterase superfamily HHJ45_23265 PF00892 EamA-like transporter family HHJ45_23275 PF01544 CorA-like Mg2+ transporter protein HHJ45_23290 PF01544 CorA-like Mg2+ transporter protein HHJ45_23295 PF09992 Phosphodiester glycosidase HHJ45_23300 PF00580 UvrD/REP helicase N-terminal domain HHJ45_23300 PF13361 UvrD-like helicase C-terminal domain HHJ45_23305 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_23310 PF02899 Phage integrase, N-terminal SAM-like domain HHJ45_23310 PF00589 Phage integrase family HHJ45_23315 PF04340 Protein of unknown function, DUF484 HHJ45_23320 PF01678 Diaminopimelate epimerase HHJ45_23325 PF13627 Prokaryotic lipoprotein-attachment site HHJ45_23345 PF01491 Frataxin-like domain HHJ45_23350 PF01295 Adenylate cyclase, class-I HHJ45_23350 PF12633 Adenylate cyclase NT domain HHJ45_23355 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HHJ45_23355 PF03900 Porphobilinogen deaminase, C-terminal domain HHJ45_23360 PF02602 Uroporphyrinogen-III synthase HemD HHJ45_23365 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HHJ45_23370 PF07719 Tetratricopeptide repeat HHJ45_23370 PF07219 HemY protein N-terminus HHJ45_23375 PF00884 Sulfatase HHJ45_23380 PF04055 Radical SAM superfamily HHJ45_23380 PF13186 Iron-sulfur cluster-binding domain HHJ45_23405 PF00324 Amino acid permease HHJ45_23410 PF03808 Glycosyl transferase WecB/TagA/CpsF family HHJ45_23415 PF06899 WzyE protein, O-antigen assembly polymerase HHJ45_23420 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 HHJ45_23425 PF01943 Polysaccharide biosynthesis protein HHJ45_23430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HHJ45_23440 PF00483 Nucleotidyl transferase HHJ45_23445 PF16363 GDP-mannose 4,6 dehydratase HHJ45_23450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HHJ45_23450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HHJ45_23450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HHJ45_23455 PF02350 UDP-N-acetylglucosamine 2-epimerase HHJ45_23460 PF02706 Chain length determinant protein HHJ45_23465 PF00953 Glycosyl transferase family 4 HHJ45_23470 PF07497 Rho termination factor, RNA-binding domain HHJ45_23470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HHJ45_23470 PF07498 Rho termination factor, N-terminal domain HHJ45_23480 PF00085 Thioredoxin HHJ45_23485 PF00271 Helicase conserved C-terminal domain HHJ45_23485 PF00270 DEAD/DEAH box helicase HHJ45_23490 PF02541 Ppx/GppA phosphatase family HHJ45_23495 PF13361 UvrD-like helicase C-terminal domain HHJ45_23495 PF00580 UvrD/REP helicase N-terminal domain HHJ45_23500 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HHJ45_23510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HHJ45_23510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HHJ45_23515 PF03466 LysR substrate binding domain HHJ45_23515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_23525 PF00585 C-terminal regulatory domain of Threonine dehydratase HHJ45_23525 PF00291 Pyridoxal-phosphate dependent enzyme HHJ45_23530 PF00920 Dehydratase family HHJ45_23535 PF01063 Amino-transferase class IV HHJ45_23545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ45_23545 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ45_23545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ45_23555 PF08046 IlvGEDA operon leader peptide HHJ45_23560 PF13335 Magnesium chelatase, subunit ChlI C-terminal HHJ45_23560 PF01078 Magnesium chelatase, subunit ChlI HHJ45_23565 PF04219 Protein of unknown function, DUF HHJ45_23570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_23570 PF03466 LysR substrate binding domain HHJ45_23605 PF00392 Bacterial regulatory proteins, gntR family HHJ45_23605 PF07729 FCD domain HHJ45_23610 PF07690 Major Facilitator Superfamily HHJ45_23615 PF00356 Bacterial regulatory proteins, lacI family HHJ45_23620 PF00294 pfkB family carbohydrate kinase HHJ45_23625 PF13407 Periplasmic binding protein domain HHJ45_23630 PF02653 Branched-chain amino acid transport system / permease component HHJ45_23635 PF00005 ABC transporter HHJ45_23640 PF05025 RbsD / FucU transport protein family HHJ45_23645 PF02705 K+ potassium transporter HHJ45_23650 PF07728 AAA domain (dynein-related subfamily) HHJ45_23650 PF12592 Protein of unknown function (DUF3763) HHJ45_23650 PF17868 AAA lid domain HHJ45_23655 PF05762 VWA domain containing CoxE-like protein HHJ45_23660 PF03590 Aspartate-ammonia ligase HHJ45_23665 PF01037 Lrp/AsnC ligand binding domain HHJ45_23670 PF00258 Flavodoxin HHJ45_23675 PF13932 GidA associated domain HHJ45_23675 PF01134 Glucose inhibited division protein A HHJ45_23680 PF02527 rRNA small subunit methyltransferase G HHJ45_23685 PF03899 ATP synthase I chain HHJ45_23690 PF00119 ATP synthase A chain HHJ45_23695 PF00137 ATP synthase subunit C HHJ45_23700 PF00430 ATP synthase B/B' CF(0) HHJ45_23705 PF00213 ATP synthase delta (OSCP) subunit HHJ45_23710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HHJ45_23710 PF00306 ATP synthase alpha/beta chain, C terminal domain HHJ45_23710 PF02874 ATP synthase alpha/beta family, beta-barrel domain HHJ45_23715 PF00231 ATP synthase HHJ45_23720 PF02874 ATP synthase alpha/beta family, beta-barrel domain HHJ45_23720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HHJ45_23725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HHJ45_23725 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HHJ45_23730 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ45_23730 PF14602 Hexapeptide repeat of succinyl-transferase HHJ45_23730 PF12804 MobA-like NTP transferase domain HHJ45_23735 PF01380 SIS domain HHJ45_23740 PF00419 Fimbrial protein HHJ45_23745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ45_23745 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ45_23750 PF13954 PapC N-terminal domain HHJ45_23750 PF00577 Outer membrane usher protein HHJ45_23750 PF13953 PapC C-terminal domain HHJ45_23760 PF12849 PBP superfamily domain HHJ45_23765 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_23770 PF00528 Binding-protein-dependent transport system inner membrane component HHJ45_23775 PF00005 ABC transporter HHJ45_23780 PF01895 PhoU domain HHJ45_23785 PF03123 CAT RNA binding domain HHJ45_23785 PF00874 PRD domain HHJ45_23790 PF00367 phosphotransferase system, EIIB HHJ45_23790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HHJ45_23790 PF02378 Phosphotransferase system, EIIC HHJ45_23795 PF00232 Glycosyl hydrolase family 1 HHJ45_23800 PF02264 LamB porin HHJ45_23800 PF11471 Maltoporin periplasmic N-terminal extension HHJ45_23805 PF00756 Putative esterase HHJ45_23805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HHJ45_23810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HHJ45_23815 PF03691 Uncharacterised protein family (UPF0167) HHJ45_23825 PF13419 Haloacid dehalogenase-like hydrolase HHJ45_23830 PF00860 Permease family HHJ45_23835 PF03358 NADPH-dependent FMN reductase HHJ45_23845 PF03466 LysR substrate binding domain HHJ45_23845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ45_23850 PF07690 Major Facilitator Superfamily HHJ45_23855 PF03222 Tryptophan/tyrosine permease family HHJ45_23860 PF01212 Beta-eliminating lyase HHJ45_23865 PF08053 Tryptophanase operon leader peptide HHJ45_23870 PF10396 GTP-binding protein TrmE N-terminus HHJ45_23870 PF01926 50S ribosome-binding GTPase HHJ45_23870 PF12631 MnmE helical domain HHJ45_23875 PF02096 60Kd inner membrane protein HHJ45_23875 PF14849 YidC periplasmic domain HHJ45_23880 PF01809 Putative membrane protein insertion efficiency factor HHJ45_23885 PF00825 Ribonuclease P HHJ45_23890 PF00468 Ribosomal protein L34 HHJ45_23900 PF01051 Initiator Replication protein HHJ45_23905 PF00589 Phage integrase family HHJ45_23940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HHJ45_23970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_23975 PF02687 FtsX-like permease family HHJ45_23975 PF00005 ABC transporter HHJ45_23975 PF12704 MacB-like periplasmic core domain HHJ45_23980 PF02321 Outer membrane efflux protein HHJ45_24005 PF07683 Cobalamin synthesis protein cobW C-terminal domain HHJ45_24005 PF02492 CobW/HypB/UreG, nucleotide-binding domain HHJ45_24015 PF06291 Bor protein HHJ45_24030 PF06722 Protein of unknown function (DUF1205) HHJ45_24035 PF00005 ABC transporter HHJ45_24035 PF00664 ABC transporter transmembrane region HHJ45_24040 PF00756 Putative esterase HHJ45_24040 PF11806 Domain of unknown function (DUF3327) HHJ45_24045 PF00756 Putative esterase HHJ45_24050 PF07715 TonB-dependent Receptor Plug Domain HHJ45_24050 PF00593 TonB dependent receptor HHJ45_24055 PF00793 DAHP synthetase I family HHJ45_24075 PF00529 HlyD membrane-fusion protein of T1SS HHJ45_24075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ45_24080 PF00664 ABC transporter transmembrane region HHJ45_24080 PF00005 ABC transporter HHJ45_24080 PF03412 Peptidase C39 family HHJ45_24085 PF17508 Microcin V bacteriocin HHJ45_24100 PF04193 PQ loop repeat HHJ45_24105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HHJ45_24105 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_24130 PF03526 Colicin E1 (microcin) immunity protein HHJ45_24135 PF11504 Colicin Ia HHJ45_24135 PF01024 Colicin pore forming domain HHJ45_24155 PF13700 Domain of unknown function (DUF4158) HHJ45_24155 PF01526 Tn3 transposase DDE domain HHJ45_24160 PF00239 Resolvase, N terminal domain HHJ45_24160 PF02796 Helix-turn-helix domain of resolvase HHJ45_24170 PF11809 Domain of unknown function (DUF3330) HHJ45_24170 PF00563 EAL domain HHJ45_24175 PF00589 Phage integrase family HHJ45_24175 PF13495 Phage integrase, N-terminal SAM-like domain HHJ45_24180 PF00186 Dihydrofolate reductase HHJ45_24185 PF13610 DDE domain HHJ45_24190 PF00239 Resolvase, N terminal domain HHJ45_24190 PF02796 Helix-turn-helix domain of resolvase HHJ45_24205 PF13610 DDE domain HHJ45_24225 PF00809 Pterin binding enzyme HHJ45_24230 PF01636 Phosphotransferase enzyme family HHJ45_24235 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HHJ45_24240 PF13610 DDE domain HHJ45_24250 PF03707 Bacterial signalling protein N terminal repeat HHJ45_24250 PF00990 Diguanylate cyclase, GGDEF domain HHJ45_24250 PF00563 EAL domain HHJ45_24250 PF13188 PAS domain HHJ45_24255 PF05052 MerE protein HHJ45_24260 PF13411 MerR HTH family regulatory protein HHJ45_24265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HHJ45_24265 PF00403 Heavy-metal-associated domain HHJ45_24265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ45_24270 PF03203 MerC mercury resistance protein HHJ45_24275 PF00403 Heavy-metal-associated domain HHJ45_24280 PF02411 MerT mercuric transport protein HHJ45_24285 PF09278 MerR, DNA binding HHJ45_24285 PF00376 MerR family regulatory protein HHJ45_24290 PF02387 IncFII RepA protein family HHJ45_24295 PF08048 Tap RepA1 leader peptide HHJ45_24300 PF10723 Replication regulatory protein RepB HHJ45_24310 PF05321 Haemolysin expression modulating protein HHJ45_24315 PF00565 Staphylococcal nuclease homologue HHJ45_24325 PF04352 ProQ/FINO family HHJ45_24325 PF12602 Fertility inhibition protein N terminal HHJ45_24330 PF00561 alpha/beta hydrolase fold HHJ45_24335 PF05857 TraX protein HHJ45_24340 PF08751 TrwC relaxase HHJ45_24340 PF18272 single-stranded DNA binding TraI N-terminal subdomain HHJ45_24340 PF07057 DNA helicase TraI HHJ45_24340 PF18340 DNA relaxase TraI 2B/2B-like domain HHJ45_24345 PF12615 F sex factor protein N terminal HHJ45_24345 PF10412 Type IV secretion-system coupling protein DNA-binding domain HHJ45_24350 PF05818 Enterobacterial TraT complement resistance protein HHJ45_24360 PF07916 TraG-like protein, N-terminal region HHJ45_24365 PF06122 Conjugative relaxosome accessory transposon protein HHJ45_24375 PF13728 F plasmid transfer operon protein HHJ45_24380 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) HHJ45_24390 PF13728 F plasmid transfer operon protein HHJ45_24395 PF11100 Conjugal transfer protein TrbE HHJ45_24400 PF06986 Type-1V conjugative transfer system mating pair stabilisation HHJ45_24405 PF09673 Type-F conjugative transfer system pilin assembly protein HHJ45_24410 PF06834 TraU protein HHJ45_24415 PF12477 Sex factor F TraW protein N terminal HHJ45_24420 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) HHJ45_24425 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer HHJ45_24430 PF01258 Prokaryotic dksA/traR C4-type zinc finger HHJ45_24435 PF09676 Type IV conjugative transfer system lipoprotein (TraV) HHJ45_24445 PF10894 Protein of unknown function (DUF2689) HHJ45_24450 PF07296 TraP protein HHJ45_24455 PF03743 Bacterial conjugation TrbI-like protein HHJ45_24460 PF06586 TraK protein HHJ45_24465 PF05309 TraE protein HHJ45_24470 PF07178 TraL protein HHJ45_24475 PF05513 TraA HHJ45_24480 PF05509 TraY domain HHJ45_24490 PF05261 TraM protein, DNA-binding HHJ45_24500 PF06067 Domain of unknown function (DUF932) HHJ45_24515 PF01848 Hok/gef family HHJ45_24520 PF06952 PsiA protein HHJ45_24525 PF06290 Plasmid SOS inhibition protein (PsiB) HHJ45_24530 PF02195 ParB-like nuclease domain HHJ45_24535 PF06006 Bacterial protein of unknown function (DUF905) HHJ45_24540 PF00436 Single-strand binding protein family HHJ45_24575 PF07128 Protein of unknown function (DUF1380) HHJ45_24580 PF03230 Antirestriction protein HHJ45_24610 PF02195 ParB-like nuclease domain HHJ45_24610 PF18090 Centromere-binding protein HTH domain HHJ45_24615 PF13614 AAA domain HHJ45_24625 PF07715 TonB-dependent Receptor Plug Domain HHJ45_24625 PF00593 TonB dependent receptor HHJ45_24630 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HHJ45_24635 PF04183 IucA / IucC family HHJ45_24635 PF06276 Ferric iron reductase FhuF-like transporter HHJ45_24645 PF06276 Ferric iron reductase FhuF-like transporter HHJ45_24645 PF04183 IucA / IucC family HHJ45_24655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HHJ45_24670 PF00950 ABC 3 transport family HHJ45_24675 PF00950 ABC 3 transport family HHJ45_24680 PF00005 ABC transporter HHJ45_24685 PF01297 Zinc-uptake complex component A periplasmic HHJ45_24710 PF13700 Domain of unknown function (DUF4158) HHJ45_24710 PF01526 Tn3 transposase DDE domain HHJ45_24715 PF13610 DDE domain HHJ45_24745 PF02517 CPBP intramembrane metalloprotease HHJ45_24755 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HHJ45_24760 PF00717 Peptidase S24-like HHJ45_24765 PF13438 Domain of unknown function (DUF4113) HHJ45_24765 PF11799 impB/mucB/samB family C-terminal domain HHJ45_24765 PF00817 impB/mucB/samB family HHJ45_24840 PF00589 Phage integrase family HHJ45_24845 PF06406 StbA protein HHJ45_24855 PF13091 PLD-like domain HHJ45_24890 PF01022 Bacterial regulatory protein, arsR family HHJ45_24895 PF06953 Arsenical resistance operon trans-acting repressor ArsD HHJ45_24900 PF02374 Anion-transporting ATPase HHJ45_24905 PF02040 Arsenical pump membrane protein HHJ45_24910 PF03960 ArsC family HHJ45_24915 PF02374 Anion-transporting ATPase HHJ45_24920 PF02796 Helix-turn-helix domain of resolvase HHJ45_24920 PF00239 Resolvase, N terminal domain HHJ45_24925 PF13700 Domain of unknown function (DUF4158) HHJ45_24925 PF01526 Tn3 transposase DDE domain HHJ45_24955 PF05321 Haemolysin expression modulating protein HHJ45_24975 PF03230 Antirestriction protein HHJ45_24990 PF00436 Single-strand binding protein family HHJ45_25015 PF03432 Relaxase/Mobilisation nuclease domain