locus-tag class description EYD11_00005 PF11638 DnaA N-terminal domain EYD11_00005 PF00308 Bacterial dnaA protein EYD11_00005 PF08299 Bacterial dnaA protein helix-turn-helix EYD11_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain EYD11_00010 PF02767 DNA polymerase III beta subunit, central domain EYD11_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain EYD11_00015 PF02463 RecF/RecN/SMC N terminal domain EYD11_00020 PF01751 Toprim domain EYD11_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_00020 PF18053 DNA gyrase B subunit insert domain EYD11_00020 PF00204 DNA gyrase B EYD11_00020 PF00986 DNA gyrase B subunit, carboxyl terminus EYD11_00025 PF06078 Bacterial protein of unknown function (DUF937) EYD11_00040 PF07729 FCD domain EYD11_00040 PF00392 Bacterial regulatory proteins, gntR family EYD11_00045 PF05035 2-keto-3-deoxy-galactonokinase EYD11_00050 PF01081 KDPG and KHG aldolase EYD11_00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD11_00055 PF13378 Enolase C-terminal domain-like EYD11_00060 PF07690 Major Facilitator Superfamily EYD11_00065 PF01494 FAD binding domain EYD11_00070 PF12566 Protein of unknown function (DUF3748) EYD11_00070 PF07676 WD40-like Beta Propeller Repeat EYD11_00075 PF07119 Protein of unknown function (DUF1375) EYD11_00080 PF00011 Hsp20/alpha crystallin family EYD11_00085 PF00011 Hsp20/alpha crystallin family EYD11_00090 PF06826 Predicted Permease Membrane Region EYD11_00090 PF02080 TrkA-C domain EYD11_00095 PF00392 Bacterial regulatory proteins, gntR family EYD11_00095 PF07702 UTRA domain EYD11_00100 PF00367 phosphotransferase system, EIIB EYD11_00100 PF02378 Phosphotransferase system, EIIC EYD11_00110 PF02311 AraC-like ligand binding domain EYD11_00110 PF12833 Helix-turn-helix domain EYD11_00115 PF00474 Sodium:solute symporter family EYD11_00120 PF16347 Domain of unknown function (DUF4976) EYD11_00120 PF00884 Sulfatase EYD11_00130 PF02656 Domain of unknown function (DUF202) EYD11_00135 PF02656 Domain of unknown function (DUF202) EYD11_00145 PF07690 Major Facilitator Superfamily EYD11_00150 PF13939 Toxin TisB, type I toxin-antitoxin system EYD11_00155 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 EYD11_00155 PF01610 Transposase EYD11_00155 PF13542 Helix-turn-helix domain of transposase family ISL3 EYD11_00160 PF08049 IlvB leader peptide EYD11_00165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_00165 PF00205 Thiamine pyrophosphate enzyme, central domain EYD11_00165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD11_00170 PF01842 ACT domain EYD11_00175 PF00196 Bacterial regulatory proteins, luxR family EYD11_00175 PF00072 Response regulator receiver domain EYD11_00180 PF07730 Histidine kinase EYD11_00180 PF05231 MASE1 EYD11_00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_00185 PF07690 Major Facilitator Superfamily EYD11_00190 PF07690 Major Facilitator Superfamily EYD11_00195 PF01979 Amidohydrolase family EYD11_00195 PF13382 Adenine deaminase C-terminal domain EYD11_00200 PF00860 Permease family EYD11_00205 PF06711 Protein of unknown function (DUF1198) EYD11_00210 PF07690 Major Facilitator Superfamily EYD11_00220 PF03180 NLPA lipoprotein EYD11_00225 PF00892 EamA-like transporter family EYD11_00230 PF07690 Major Facilitator Superfamily EYD11_00250 PF01055 Glycosyl hydrolases family 31 EYD11_00250 PF13802 Galactose mutarotase-like EYD11_00255 PF05170 AsmA family EYD11_00260 PF00860 Permease family EYD11_00265 PF03616 Sodium/glutamate symporter EYD11_00270 PF00270 DEAD/DEAH box helicase EYD11_00270 PF00271 Helicase conserved C-terminal domain EYD11_00270 PF17191 RecG wedge domain EYD11_00275 PF00588 SpoU rRNA Methylase family EYD11_00275 PF12105 SpoU, rRNA methylase, C-terminal EYD11_00280 PF02824 TGS domain EYD11_00280 PF04607 Region found in RelA / SpoT proteins EYD11_00280 PF13291 ACT domain EYD11_00285 PF01192 RNA polymerase Rpb6 EYD11_00290 PF00625 Guanylate kinase EYD11_00295 PF03120 NAD-dependent DNA ligase OB-fold domain EYD11_00295 PF01653 NAD-dependent DNA ligase adenylation domain EYD11_00300 PF03458 UPF0126 domain EYD11_00310 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 EYD11_00310 PF13542 Helix-turn-helix domain of transposase family ISL3 EYD11_00310 PF01610 Transposase EYD11_00315 PF08340 Domain of unknown function (DUF1732) EYD11_00315 PF03755 YicC-like family, N-terminal region EYD11_00320 PF03725 3' exoribonuclease family, domain 2 EYD11_00320 PF01138 3' exoribonuclease family, domain 1 EYD11_00325 PF00156 Phosphoribosyl transferase domain EYD11_00330 PF00440 Bacterial regulatory proteins, tetR family EYD11_00335 PF00692 dUTPase EYD11_00340 PF04127 DNA / pantothenate metabolism flavoprotein EYD11_00340 PF02441 Flavoprotein EYD11_00345 PF04002 RadC-like JAB domain EYD11_00350 PF00830 Ribosomal L28 family EYD11_00355 PF00471 Ribosomal protein L33 EYD11_00360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EYD11_00360 PF06827 Zinc finger found in FPG and IleRS EYD11_00360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EYD11_00365 PF01467 Cytidylyltransferase-like EYD11_00370 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EYD11_00375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EYD11_00380 PF13439 Glycosyltransferase Family 4 EYD11_00380 PF00534 Glycosyl transferases group 1 EYD11_00390 PF08437 Glycosyl transferase family 8 C-terminal EYD11_00390 PF01501 Glycosyl transferase family 8 EYD11_00395 PF00534 Glycosyl transferases group 1 EYD11_00395 PF13439 Glycosyltransferase Family 4 EYD11_00400 PF08437 Glycosyl transferase family 8 C-terminal EYD11_00400 PF01501 Glycosyl transferase family 8 EYD11_00405 PF08437 Glycosyl transferase family 8 C-terminal EYD11_00405 PF01501 Glycosyl transferase family 8 EYD11_00410 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) EYD11_00420 PF00534 Glycosyl transferases group 1 EYD11_00425 PF04932 O-Antigen ligase EYD11_00430 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EYD11_00435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EYD11_00440 PF01370 NAD dependent epimerase/dehydratase family EYD11_00445 PF00155 Aminotransferase class I and II EYD11_00450 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_00450 PF00107 Zinc-binding dehydrogenase EYD11_00455 PF00535 Glycosyl transferase family 2 EYD11_00460 PF04748 Divergent polysaccharide deacetylase EYD11_00465 PF01551 Peptidase family M23 EYD11_00470 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EYD11_00470 PF01676 Metalloenzyme superfamily EYD11_00480 PF00581 Rhodanese-like domain EYD11_00485 PF00462 Glutaredoxin EYD11_00490 PF02556 Preprotein translocase subunit SecB EYD11_00495 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EYD11_00495 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EYD11_00500 PF06426 Serine acetyltransferase, N-terminal EYD11_00500 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_00505 PF00588 SpoU rRNA Methylase family EYD11_00510 PF01070 FMN-dependent dehydrogenase EYD11_00515 PF07729 FCD domain EYD11_00515 PF00392 Bacterial regulatory proteins, gntR family EYD11_00520 PF02652 L-lactate permease EYD11_00525 PF10928 Protein of unknown function (DUF2810) EYD11_00535 PF05068 Mannitol repressor EYD11_00540 PF08125 Mannitol dehydrogenase C-terminal domain EYD11_00540 PF01232 Mannitol dehydrogenase Rossmann domain EYD11_00545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_00545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_00545 PF02378 Phosphotransferase system, EIIC EYD11_00550 PF11742 Protein of unknown function (DUF3302) EYD11_00555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_00555 PF00529 HlyD membrane-fusion protein of T1SS EYD11_00560 PF15596 Immunity protein 57 EYD11_00590 PF03130 PBS lyase HEAT-like repeat EYD11_00595 PF05593 RHS Repeat EYD11_00595 PF03527 RHS protein EYD11_00595 PF15606 Bacterial toxin 34 EYD11_00600 PF00043 Glutathione S-transferase, C-terminal domain EYD11_00600 PF13417 Glutathione S-transferase, N-terminal domain EYD11_00605 PF03841 L-seryl-tRNA selenium transferase EYD11_00605 PF12390 Selenocysteine synthase N terminal EYD11_00610 PF00009 Elongation factor Tu GTP binding domain EYD11_00610 PF03144 Elongation factor Tu domain 2 EYD11_00610 PF09106 Elongation factor SelB, winged helix EYD11_00610 PF09107 Elongation factor SelB, winged helix EYD11_00615 PF00465 Iron-containing alcohol dehydrogenase EYD11_00620 PF00171 Aldehyde dehydrogenase family EYD11_00630 PF11742 Protein of unknown function (DUF3302) EYD11_00635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_00635 PF00529 HlyD membrane-fusion protein of T1SS EYD11_00640 PF03466 LysR substrate binding domain EYD11_00640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_00645 PF06629 MltA-interacting protein MipA EYD11_00655 PF00596 Class II Aldolase and Adducin N-terminal domain EYD11_00660 PF01261 Xylose isomerase-like TIM barrel EYD11_00665 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EYD11_00670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_00670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD11_00675 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD11_00680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD11_00685 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EYD11_00690 PF04074 YhcH/YjgK/YiaL EYD11_00695 PF02615 Malate/L-lactate dehydrogenase EYD11_00700 PF09339 IclR helix-turn-helix domain EYD11_00700 PF01614 Bacterial transcriptional regulator EYD11_00705 PF13247 4Fe-4S dicluster domain EYD11_00710 PF00155 Aminotransferase class I and II EYD11_00715 PF00128 Alpha amylase, catalytic domain EYD11_00720 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EYD11_00725 PF12833 Helix-turn-helix domain EYD11_00730 PF02653 Branched-chain amino acid transport system / permease component EYD11_00735 PF00005 ABC transporter EYD11_00740 PF13407 Periplasmic binding protein domain EYD11_00750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_00750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD11_00755 PF05360 yiaA/B two helix domain EYD11_00760 PF05360 yiaA/B two helix domain EYD11_00765 PF01757 Acyltransferase family EYD11_00770 PF13983 YsaB-like lipoprotein EYD11_00775 PF02091 Glycyl-tRNA synthetase alpha subunit EYD11_00780 PF05746 DALR anticodon binding domain EYD11_00780 PF02092 Glycyl-tRNA synthetase beta subunit EYD11_00790 PF01848 Hok/gef family EYD11_00795 PF00313 'Cold-shock' DNA-binding domain EYD11_00800 PF01381 Helix-turn-helix EYD11_00805 PF11254 Protein of unknown function (DUF3053) EYD11_00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD11_00810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD11_00815 PF00691 OmpA family EYD11_00815 PF13488 Glycine zipper EYD11_00820 PF18364 Molybdopterin oxidoreductase N-terminal domain EYD11_00820 PF01568 Molydopterin dinucleotide binding domain EYD11_00820 PF00384 Molybdopterin oxidoreductase EYD11_00825 PF00583 Acetyltransferase (GNAT) family EYD11_00830 PF03352 Methyladenine glycosylase EYD11_00835 PF03797 Autotransporter beta-domain EYD11_00840 PF07690 Major Facilitator Superfamily EYD11_00845 PF08019 Phosphoethanolamine transferase EptA/EptB EYD11_00845 PF00884 Sulfatase EYD11_00855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_00865 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_00870 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_00870 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD11_00875 PF00005 ABC transporter EYD11_00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_00880 PF00005 ABC transporter EYD11_00880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_00885 PF03222 Tryptophan/tyrosine permease family EYD11_00890 PF13940 Toxin Ldr, type I toxin-antitoxin system EYD11_00895 PF11658 Cellulose biosynthesis protein BcsG EYD11_00900 PF11120 Cellulose biosynthesis protein BcsF EYD11_00905 PF10995 Cellulose biosynthesis GIL EYD11_00910 PF10945 Cellulose biosynthesis protein BcsR EYD11_00920 PF03552 Cellulose synthase EYD11_00920 PF00535 Glycosyl transferase family 2 EYD11_00920 PF07238 PilZ domain EYD11_00925 PF03170 Bacterial cellulose synthase subunit EYD11_00930 PF01270 Glycosyl hydrolases family 8 EYD11_00935 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) EYD11_00940 PF00672 HAMP domain EYD11_00940 PF00990 Diguanylate cyclase, GGDEF domain EYD11_00940 PF17154 Gammaproteobacterial periplasmic sensor domain EYD11_00940 PF00563 EAL domain EYD11_00945 PF00375 Sodium:dicarboxylate symporter family EYD11_00950 PF05193 Peptidase M16 inactive domain EYD11_00950 PF00675 Insulinase (Peptidase family M16) EYD11_00955 PF00294 pfkB family carbohydrate kinase EYD11_00960 PF00563 EAL domain EYD11_00965 PF05170 AsmA family EYD11_00970 PF07690 Major Facilitator Superfamily EYD11_00970 PF00083 Sugar (and other) transporter EYD11_00975 PF03631 Virulence factor BrkB EYD11_00980 PF03466 LysR substrate binding domain EYD11_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_00985 PF00196 Bacterial regulatory proteins, luxR family EYD11_00990 PF01204 Trehalase EYD11_00995 PF03150 Di-haem cytochrome c peroxidase EYD11_00995 PF00034 Cytochrome c EYD11_00995 PF14376 Haem-binding domain EYD11_01000 PF00282 Pyridoxal-dependent decarboxylase conserved domain EYD11_01005 PF12833 Helix-turn-helix domain EYD11_01010 PF12833 Helix-turn-helix domain EYD11_01015 PF00873 AcrB/AcrD/AcrF family EYD11_01020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_01020 PF00529 HlyD membrane-fusion protein of T1SS EYD11_01030 PF00196 Bacterial regulatory proteins, luxR family EYD11_01035 PF03729 Short repeat of unknown function (DUF308) EYD11_01040 PF06411 HdeA/HdeB family EYD11_01045 PF06411 HdeA/HdeB family EYD11_01050 PF02308 MgtC family EYD11_01055 PF00196 Bacterial regulatory proteins, luxR family EYD11_01060 PF03843 Outer membrane lipoprotein Slp family EYD11_01070 PF03960 ArsC family EYD11_01075 PF02040 Arsenical pump membrane protein EYD11_01080 PF01022 Bacterial regulatory protein, arsR family EYD11_01090 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_01090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD11_01095 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EYD11_01100 PF01432 Peptidase family M3 EYD11_01105 PF04445 Putative SAM-dependent methyltransferase EYD11_01110 PF00854 POT family EYD11_01115 PF00582 Universal stress protein family EYD11_01120 PF10625 Universal stress protein B (UspB) EYD11_01125 PF01384 Phosphate transporter family EYD11_01135 PF10951 Protein of unknown function (DUF2776) EYD11_01140 PF13258 Domain of unknown function (DUF4049) EYD11_01145 PF13258 Domain of unknown function (DUF4049) EYD11_01150 PF13533 Biotin-lipoyl like EYD11_01155 PF00005 ABC transporter EYD11_01165 PF01609 Transposase DDE domain EYD11_01165 PF13808 DDE_Tnp_1-associated EYD11_01170 PF03130 PBS lyase HEAT-like repeat EYD11_01175 PF15631 NTF2 fold immunity protein EYD11_01180 PF03527 RHS protein EYD11_01180 PF14220 Domain of unknown function (DUF4329) EYD11_01180 PF05593 RHS Repeat EYD11_01185 PF01402 Ribbon-helix-helix protein, copG family EYD11_01185 PF08753 NikR C terminal nickel binding domain EYD11_01190 PF00005 ABC transporter EYD11_01195 PF00005 ABC transporter EYD11_01200 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_01205 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_01210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_01215 PF01648 4'-phosphopantetheinyl transferase superfamily EYD11_01220 PF01594 AI-2E family transporter EYD11_01225 PF07690 Major Facilitator Superfamily EYD11_01230 PF08786 DcrB EYD11_01235 PF02592 Putative vitamin uptake transporter EYD11_01240 PF01206 Sulfurtransferase TusA EYD11_01245 PF00403 Heavy-metal-associated domain EYD11_01250 PF07947 YhhN family EYD11_01255 PF10694 Protein of unknown function (DUF2500) EYD11_01260 PF06611 Protein of unknown function (DUF1145) EYD11_01270 PF00448 SRP54-type protein, GTPase domain EYD11_01270 PF02881 SRP54-type protein, helical bundle domain EYD11_01275 PF00005 ABC transporter EYD11_01280 PF18075 FtsX extracellular domain EYD11_01280 PF02687 FtsX-like permease family EYD11_01285 PF04545 Sigma-70, region 4 EYD11_01285 PF04542 Sigma-70 region 2 EYD11_01290 PF13458 Periplasmic binding protein EYD11_01295 PF12568 Acetyltransferase (GNAT) domain, PanZ EYD11_01300 PF13458 Periplasmic binding protein EYD11_01305 PF02653 Branched-chain amino acid transport system / permease component EYD11_01310 PF02653 Branched-chain amino acid transport system / permease component EYD11_01310 PF11862 Domain of unknown function (DUF3382) EYD11_01315 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYD11_01315 PF00005 ABC transporter EYD11_01320 PF00005 ABC transporter EYD11_01325 PF13416 Bacterial extracellular solute-binding protein EYD11_01330 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_01335 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_01340 PF17912 MalK OB fold domain EYD11_01340 PF00005 ABC transporter EYD11_01345 PF03009 Glycerophosphoryl diester phosphodiesterase family EYD11_01360 PF15567 Immunity protein 35 EYD11_01380 PF05638 Type VI secretion system effector, Hcp EYD11_01385 PF00583 Acetyltransferase (GNAT) family EYD11_01390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD11_01390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD11_01395 PF17954 Quercetinase C-terminal cupin domain EYD11_01395 PF02678 Pirin EYD11_01400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD11_01400 PF00356 Bacterial regulatory proteins, lacI family EYD11_01405 PF01202 Shikimate kinase EYD11_01410 PF02447 GntP family permease EYD11_01415 PF01914 MarC family integral membrane protein EYD11_01420 PF01118 Semialdehyde dehydrogenase, NAD binding domain EYD11_01420 PF02774 Semialdehyde dehydrogenase, dimerisation domain EYD11_01425 PF02806 Alpha amylase, C-terminal all-beta domain EYD11_01425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD11_01425 PF00128 Alpha amylase, catalytic domain EYD11_01430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD11_01430 PF18390 Glycogen debranching enzyme C-terminal domain EYD11_01430 PF00128 Alpha amylase, catalytic domain EYD11_01435 PF00483 Nucleotidyl transferase EYD11_01440 PF00534 Glycosyl transferases group 1 EYD11_01440 PF08323 Starch synthase catalytic domain EYD11_01445 PF00343 Carbohydrate phosphorylase EYD11_01455 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EYD11_01455 PF01266 FAD dependent oxidoreductase EYD11_01460 PF00581 Rhodanese-like domain EYD11_01465 PF01694 Rhomboid family EYD11_01465 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EYD11_01470 PF00455 DeoR C terminal sensor domain EYD11_01470 PF08220 DeoR-like helix-turn-helix domain EYD11_01475 PF06956 Regulator of RNA terminal phosphate cyclase EYD11_01475 PF00158 Sigma-54 interaction domain EYD11_01480 PF01139 tRNA-splicing ligase RtcB EYD11_01485 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain EYD11_01485 PF01137 RNA 3'-terminal phosphate cyclase EYD11_01490 PF17874 MalT-like TPR region EYD11_01490 PF00196 Bacterial regulatory proteins, luxR family EYD11_01495 PF00343 Carbohydrate phosphorylase EYD11_01500 PF02446 4-alpha-glucanotransferase EYD11_01505 PF02447 GntP family permease EYD11_01510 PF01521 Iron-sulphur cluster biosynthesis EYD11_01510 PF01106 NifU-like domain EYD11_01515 PF00156 Phosphoribosyl transferase domain EYD11_01520 PF00561 alpha/beta hydrolase fold EYD11_01525 PF04754 Putative transposase, YhgA-like EYD11_01530 PF09012 FeoC like transcriptional regulator EYD11_01535 PF07670 Nucleoside recognition EYD11_01535 PF02421 Ferrous iron transport protein B EYD11_01535 PF17910 FeoB cytosolic helical domain EYD11_01535 PF07664 Ferrous iron transport protein B C terminus EYD11_01540 PF04023 FeoA domain EYD11_01545 PF17674 HHH domain EYD11_01545 PF16921 Tex protein YqgF-like domain EYD11_01545 PF09371 Tex-like protein N-terminal domain EYD11_01545 PF00575 S1 RNA binding domain EYD11_01550 PF03449 Transcription elongation factor, N-terminal EYD11_01550 PF01272 Transcription elongation factor, GreA/GreB, C-term EYD11_01555 PF00486 Transcriptional regulatory protein, C terminal EYD11_01555 PF00072 Response regulator receiver domain EYD11_01560 PF00672 HAMP domain EYD11_01560 PF00512 His Kinase A (phospho-acceptor) domain EYD11_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_01565 PF01293 Phosphoenolpyruvate carboxykinase EYD11_01570 PF13687 Domain of unknown function (DUF4153) EYD11_01575 PF01430 Hsp33 protein EYD11_01580 PF01479 S4 domain EYD11_01585 PF13419 Haloacid dehalogenase-like hydrolase EYD11_01590 PF07095 Intracellular growth attenuator protein IgaA EYD11_01595 PF00293 NUDIX domain EYD11_01600 PF17092 Penicillin-binding protein OB-like domain EYD11_01600 PF00912 Transglycosylase EYD11_01600 PF00905 Penicillin binding protein transpeptidase domain EYD11_01610 PF05137 Fimbrial assembly protein (PilN) EYD11_01620 PF10748 DNA utilization proteins HofP EYD11_01625 PF00263 Bacterial type II and III secretion system protein EYD11_01625 PF03958 Bacterial type II/III secretion system short domain EYD11_01630 PF01202 Shikimate kinase EYD11_01635 PF01761 3-dehydroquinate synthase EYD11_01640 PF05036 Sporulation related domain EYD11_01645 PF02086 D12 class N6 adenine-specific DNA methyltransferase EYD11_01650 PF00834 Ribulose-phosphate 3 epimerase family EYD11_01655 PF13419 Haloacid dehalogenase-like hydrolase EYD11_01660 PF00579 tRNA synthetases class I (W and Y) EYD11_01670 PF14503 YhfZ C-terminal domain EYD11_01670 PF14502 Helix-turn-helix domain EYD11_01680 PF01168 Alanine racemase, N-terminal domain EYD11_01685 PF01676 Metalloenzyme superfamily EYD11_01690 PF02126 Phosphotriesterase family EYD11_01695 PF10941 Protein of unknown function DUF2620 EYD11_01700 PF10797 Protein of unknown function EYD11_01705 PF00155 Aminotransferase class I and II EYD11_01710 PF07702 UTRA domain EYD11_01710 PF00392 Bacterial regulatory proteins, gntR family EYD11_01715 PF00294 pfkB family carbohydrate kinase EYD11_01720 PF01261 Xylose isomerase-like TIM barrel EYD11_01725 PF01380 SIS domain EYD11_01730 PF13520 Amino acid permease EYD11_01735 PF13978 Protein of unknown function (DUF4223) EYD11_01740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD11_01740 PF14824 Sirohaem biosynthesis protein central EYD11_01740 PF10414 Sirohaem synthase dimerisation region EYD11_01745 PF01226 Formate/nitrite transporter EYD11_01750 PF13806 Rieske-like [2Fe-2S] domain EYD11_01755 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_01755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EYD11_01755 PF18267 Rubredoxin NAD+ reductase C-terminal domain EYD11_01755 PF04324 BFD-like [2Fe-2S] binding domain EYD11_01755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EYD11_01760 PF07690 Major Facilitator Superfamily EYD11_01765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EYD11_01770 PF10832 Protein of unknown function (DUF2559) EYD11_01775 PF02661 Fic/DOC family EYD11_01780 PF00117 Glutamine amidotransferase class-I EYD11_01785 PF00202 Aminotransferase class-III EYD11_01790 PF12805 FUSC-like inner membrane protein yccS EYD11_01795 PF00027 Cyclic nucleotide-binding domain EYD11_01795 PF13545 Crp-like helix-turn-helix domain EYD11_01800 PF02566 OsmC-like protein EYD11_01805 PF00485 Phosphoribulokinase / Uridine kinase family EYD11_01810 PF06794 Uncharacterised protein family (UPF0270) EYD11_01815 PF00561 alpha/beta hydrolase fold EYD11_01820 PF00005 ABC transporter EYD11_01820 PF12848 ABC transporter EYD11_01825 PF02525 Flavodoxin-like fold EYD11_01830 PF00999 Sodium/hydrogen exchanger family EYD11_01830 PF02254 TrkA-N domain EYD11_01835 PF09526 Probable metal-binding protein (DUF2387) EYD11_01840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYD11_01845 PF04102 SlyX EYD11_01850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYD11_01850 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EYD11_01855 PF13309 HTH domain EYD11_01855 PF08348 YheO-like PAS domain EYD11_01860 PF02635 DsrE/DsrF-like family EYD11_01865 PF02635 DsrE/DsrF-like family EYD11_01870 PF04077 DsrH like protein EYD11_01875 PF00164 Ribosomal protein S12/S23 EYD11_01880 PF00177 Ribosomal protein S7p/S5e EYD11_01885 PF00679 Elongation factor G C-terminus EYD11_01885 PF14492 Elongation Factor G, domain II EYD11_01885 PF03764 Elongation factor G, domain IV EYD11_01885 PF00009 Elongation factor Tu GTP binding domain EYD11_01885 PF03144 Elongation factor Tu domain 2 EYD11_01890 PF00009 Elongation factor Tu GTP binding domain EYD11_01890 PF03144 Elongation factor Tu domain 2 EYD11_01890 PF03143 Elongation factor Tu C-terminal domain EYD11_01895 PF02839 Carbohydrate binding domain EYD11_01900 PF04324 BFD-like [2Fe-2S] binding domain EYD11_01905 PF00210 Ferritin-like domain EYD11_01910 PF01478 Type IV leader peptidase family EYD11_01915 PF04612 Type II secretion system (T2SS), protein M EYD11_01920 PF05134 Type II secretion system (T2SS), protein L EYD11_01920 PF12693 GspL periplasmic domain EYD11_01925 PF03934 Type II secretion system (T2SS), protein K EYD11_01930 PF11612 Type II secretion system (T2SS), protein J EYD11_01930 PF07963 Prokaryotic N-terminal methylation motif EYD11_01935 PF02501 Type II secretion system (T2SS), protein I EYD11_01935 PF07963 Prokaryotic N-terminal methylation motif EYD11_01940 PF07963 Prokaryotic N-terminal methylation motif EYD11_01940 PF12019 Type II transport protein GspH EYD11_01945 PF08334 Type II secretion system (T2SS), protein G EYD11_01945 PF07963 Prokaryotic N-terminal methylation motif EYD11_01950 PF00482 Type II secretion system (T2SS), protein F EYD11_01955 PF00437 Type II/IV secretion system protein EYD11_01960 PF03958 Bacterial type II/III secretion system short domain EYD11_01960 PF00263 Bacterial type II and III secretion system protein EYD11_01965 PF11356 Type II secretion system protein C EYD11_01970 PF13401 AAA domain EYD11_01970 PF01471 Putative peptidoglycan binding domain EYD11_01980 PF00338 Ribosomal protein S10p/S20e EYD11_01985 PF00297 Ribosomal protein L3 EYD11_01990 PF00573 Ribosomal protein L4/L1 family EYD11_01995 PF00276 Ribosomal protein L23 EYD11_02000 PF03947 Ribosomal Proteins L2, C-terminal domain EYD11_02000 PF00181 Ribosomal Proteins L2, RNA binding domain EYD11_02005 PF00203 Ribosomal protein S19 EYD11_02010 PF00237 Ribosomal protein L22p/L17e EYD11_02015 PF07650 KH domain EYD11_02015 PF00189 Ribosomal protein S3, C-terminal domain EYD11_02020 PF00252 Ribosomal protein L16p/L10e EYD11_02025 PF00831 Ribosomal L29 protein EYD11_02030 PF00366 Ribosomal protein S17 EYD11_02035 PF00238 Ribosomal protein L14p/L23e EYD11_02040 PF00467 KOW motif EYD11_02040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EYD11_02045 PF00281 Ribosomal protein L5 EYD11_02045 PF00673 ribosomal L5P family C-terminus EYD11_02050 PF00253 Ribosomal protein S14p/S29e EYD11_02055 PF00410 Ribosomal protein S8 EYD11_02060 PF00347 Ribosomal protein L6 EYD11_02065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EYD11_02070 PF03719 Ribosomal protein S5, C-terminal domain EYD11_02070 PF00333 Ribosomal protein S5, N-terminal domain EYD11_02075 PF00327 Ribosomal protein L30p/L7e EYD11_02080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EYD11_02085 PF00344 SecY translocase EYD11_02090 PF00444 Ribosomal protein L36 EYD11_02095 PF00416 Ribosomal protein S13/S18 EYD11_02100 PF00411 Ribosomal protein S11 EYD11_02105 PF00163 Ribosomal protein S4/S9 N-terminal domain EYD11_02105 PF01479 S4 domain EYD11_02110 PF01000 RNA polymerase Rpb3/RpoA insert domain EYD11_02110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EYD11_02110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EYD11_02115 PF01196 Ribosomal protein L17 EYD11_02120 PF09350 Domain of unknown function (DUF1992) EYD11_02125 PF13411 MerR HTH family regulatory protein EYD11_02130 PF03889 Alternative ribosome-rescue factor A EYD11_02135 PF01741 Large-conductance mechanosensitive channel, MscL EYD11_02140 PF02080 TrkA-C domain EYD11_02140 PF02254 TrkA-N domain EYD11_02145 PF01189 16S rRNA methyltransferase RsmB/F EYD11_02145 PF01029 NusB family EYD11_02150 PF00551 Formyl transferase EYD11_02150 PF02911 Formyl transferase, C-terminal domain EYD11_02155 PF01327 Polypeptide deformylase EYD11_02160 PF17782 DprA winged helix domain EYD11_02160 PF02481 DNA recombination-mediator protein A EYD11_02165 PF04361 Protein of unknown function (DUF494) EYD11_02170 PF01396 Topoisomerase DNA binding C4 zinc finger EYD11_02175 PF01300 Telomere recombination EYD11_02180 PF08501 Shikimate dehydrogenase substrate binding domain EYD11_02180 PF01488 Shikimate / quinate 5-dehydrogenase EYD11_02180 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EYD11_02185 PF07369 Protein of unknown function (DUF1488) EYD11_02190 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_02230 PF00005 ABC transporter EYD11_02235 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_02240 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_02245 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_02255 PF00873 AcrB/AcrD/AcrF family EYD11_02265 PF13737 Transposase DDE domain EYD11_02275 PF01555 DNA methylase EYD11_02280 PF02954 Bacterial regulatory protein, Fis family EYD11_02285 PF01207 Dihydrouridine synthase (Dus) EYD11_02295 PF00474 Sodium:solute symporter family EYD11_02300 PF06196 Protein of unknown function (DUF997) EYD11_02305 PF00289 Biotin carboxylase, N-terminal domain EYD11_02305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD11_02305 PF02785 Biotin carboxylase C-terminal domain EYD11_02310 PF00364 Biotin-requiring enzyme EYD11_02315 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_02315 PF00107 Zinc-binding dehydrogenase EYD11_02320 PF00990 Diguanylate cyclase, GGDEF domain EYD11_02320 PF00563 EAL domain EYD11_02320 PF17157 Gammaproteobacterial periplasmic sensor domain EYD11_02335 PF04085 rod shape-determining protein MreC EYD11_02340 PF04093 rod shape-determining protein MreD EYD11_02345 PF02545 Maf-like protein EYD11_02350 PF10150 Ribonuclease E/G family EYD11_02350 PF00575 S1 RNA binding domain EYD11_02355 PF13502 AsmA-like C-terminal region EYD11_02355 PF13116 Protein of unknown function EYD11_02360 PF01523 Putative modulator of DNA gyrase EYD11_02365 PF03466 LysR substrate binding domain EYD11_02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_02370 PF07869 Protein of unknown function (DUF1656) EYD11_02375 PF13533 Biotin-lipoyl like EYD11_02380 PF04632 Fusaric acid resistance protein family EYD11_02385 PF01337 Barstar (barnase inhibitor) EYD11_02390 PF07338 Protein of unknown function (DUF1471) EYD11_02395 PF02863 Arginine repressor, C-terminal domain EYD11_02395 PF01316 Arginine repressor, DNA binding domain EYD11_02400 PF00056 lactate/malate dehydrogenase, NAD binding domain EYD11_02400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EYD11_02405 PF13180 PDZ domain EYD11_02410 PF13180 PDZ domain EYD11_02410 PF00595 PDZ domain EYD11_02415 PF06295 Protein of unknown function (DUF1043) EYD11_02420 PF03969 AFG1-like ATPase EYD11_02425 PF00572 Ribosomal protein L13 EYD11_02430 PF00380 Ribosomal protein S9/S16 EYD11_02435 PF02798 Glutathione S-transferase, N-terminal domain EYD11_02435 PF00043 Glutathione S-transferase, C-terminal domain EYD11_02440 PF04386 Stringent starvation protein B EYD11_02445 PF03606 C4-dicarboxylate anaerobic carrier EYD11_02450 PF00392 Bacterial regulatory proteins, gntR family EYD11_02450 PF07729 FCD domain EYD11_02455 PF00701 Dihydrodipicolinate synthetase family EYD11_02460 PF07690 Major Facilitator Superfamily EYD11_02465 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EYD11_02470 PF00480 ROK family EYD11_02475 PF04074 YhcH/YjgK/YiaL EYD11_02480 PF06250 YhcG PDDEXK nuclease domain EYD11_02480 PF17761 DUF1016 N-terminal domain EYD11_02495 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EYD11_02510 PF06551 Protein of unknown function (DUF1120) EYD11_02520 PF00577 Outer membrane usher protein EYD11_02520 PF13954 PapC N-terminal domain EYD11_02520 PF13953 PapC C-terminal domain EYD11_02525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_02530 PF06551 Protein of unknown function (DUF1120) EYD11_02535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EYD11_02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_02540 PF00310 Glutamine amidotransferases class-II EYD11_02540 PF01493 GXGXG motif EYD11_02540 PF01645 Conserved region in glutamate synthase EYD11_02540 PF04898 Glutamate synthase central domain EYD11_02545 PF16199 Radical_SAM C-terminal domain EYD11_02545 PF04055 Radical SAM superfamily EYD11_02550 PF18415 Histidine kinase receptor ArcB trans-membrane domain EYD11_02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_02550 PF00989 PAS fold EYD11_02550 PF01627 Hpt domain EYD11_02550 PF00512 His Kinase A (phospho-acceptor) domain EYD11_02550 PF00072 Response regulator receiver domain EYD11_02560 PF00912 Transglycosylase EYD11_02565 PF10707 PhoP regulatory network protein YrbL EYD11_02570 PF00381 PTS HPr component phosphorylation site EYD11_02575 PF03668 P-loop ATPase protein family EYD11_02580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_02585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EYD11_02590 PF04963 Sigma-54 factor, core binding domain EYD11_02590 PF00309 Sigma-54 factor, Activator interacting domain (AID) EYD11_02590 PF04552 Sigma-54, DNA binding domain EYD11_02595 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYD11_02595 PF00005 ABC transporter EYD11_02600 PF03968 OstA-like protein EYD11_02605 PF06835 Lipopolysaccharide-assembly, LptC-related EYD11_02615 PF01380 SIS domain EYD11_02615 PF00571 CBS domain EYD11_02620 PF01699 Sodium/calcium exchanger protein EYD11_02625 PF00005 ABC transporter EYD11_02630 PF02405 Permease MlaE EYD11_02635 PF02470 MlaD protein EYD11_02640 PF05494 MlaC protein EYD11_02645 PF13466 STAS domain EYD11_02650 PF01722 BolA-like protein EYD11_02655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EYD11_02660 PF13693 Winged helix-turn-helix DNA-binding EYD11_02665 PF00348 Polyprenyl synthetase EYD11_02670 PF00829 Ribosomal prokaryotic L21 protein EYD11_02675 PF01016 Ribosomal L27 protein EYD11_02680 PF00892 EamA-like transporter family EYD11_02685 PF01018 GTP1/OBG EYD11_02685 PF01926 50S ribosome-binding GTPase EYD11_02690 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EYD11_02695 PF01272 Transcription elongation factor, GreA/GreB, C-term EYD11_02695 PF03449 Transcription elongation factor, N-terminal EYD11_02700 PF01985 CRS1 / YhbY (CRM) domain EYD11_02705 PF01728 FtsJ-like methyltransferase EYD11_02710 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_02710 PF06480 FtsH Extracellular EYD11_02710 PF17862 AAA+ lid domain EYD11_02710 PF01434 Peptidase family M41 EYD11_02715 PF00809 Pterin binding enzyme EYD11_02720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYD11_02720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYD11_02720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYD11_02720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYD11_02725 PF03840 Preprotein translocase SecG subunit EYD11_02735 PF00884 Sulfatase EYD11_02740 PF00764 Arginosuccinate synthase EYD11_02750 PF17384 RimP C-terminal SH3 domain EYD11_02750 PF02576 RimP N-terminal domain EYD11_02755 PF13184 NusA-like KH domain EYD11_02755 PF00575 S1 RNA binding domain EYD11_02755 PF08529 NusA N-terminal domain EYD11_02760 PF04760 Translation initiation factor IF-2, N-terminal region EYD11_02760 PF08364 Bacterial translation initiation factor IF-2 associated region EYD11_02760 PF11987 Translation-initiation factor 2 EYD11_02760 PF00009 Elongation factor Tu GTP binding domain EYD11_02765 PF02033 Ribosome-binding factor A EYD11_02770 PF09157 Pseudouridine synthase II TruB, C-terminal EYD11_02770 PF16198 tRNA pseudouridylate synthase B C-terminal domain EYD11_02770 PF01509 TruB family pseudouridylate synthase (N terminal domain) EYD11_02775 PF00312 Ribosomal protein S15 EYD11_02780 PF00013 KH domain EYD11_02780 PF01138 3' exoribonuclease family, domain 1 EYD11_02780 PF03725 3' exoribonuclease family, domain 2 EYD11_02780 PF00575 S1 RNA binding domain EYD11_02780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EYD11_02785 PF13181 Tetratricopeptide repeat EYD11_02785 PF07719 Tetratricopeptide repeat EYD11_02795 PF00270 DEAD/DEAH box helicase EYD11_02795 PF12343 Cold shock protein DEAD box A EYD11_02795 PF00271 Helicase conserved C-terminal domain EYD11_02795 PF03880 DbpA RNA binding domain EYD11_02800 PF03222 Tryptophan/tyrosine permease family EYD11_02805 PF00296 Luciferase-like monooxygenase EYD11_02825 PF13508 Acetyltransferase (GNAT) domain EYD11_02830 PF01541 GIY-YIG catalytic domain EYD11_02840 PF01965 DJ-1/PfpI family EYD11_02845 PF13460 NAD(P)H-binding EYD11_02850 PF03773 Predicted permease EYD11_02855 PF04972 BON domain EYD11_02860 PF13580 SIS domain EYD11_02865 PF02021 Uncharacterised protein family UPF0102 EYD11_02870 PF04348 LppC putative lipoprotein EYD11_02875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD11_02880 PF00419 Fimbrial protein EYD11_02885 PF13953 PapC C-terminal domain EYD11_02885 PF13954 PapC N-terminal domain EYD11_02885 PF00577 Outer membrane usher protein EYD11_02890 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_02890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_02895 PF00419 Fimbrial protein EYD11_02900 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EYD11_02905 PF03613 PTS system mannose/fructose/sorbose family IID component EYD11_02910 PF03609 PTS system sorbose-specific iic component EYD11_02920 PF03830 PTS system sorbose subfamily IIB component EYD11_02925 PF01116 Fructose-bisphosphate aldolase class-II EYD11_02930 PF01380 SIS domain EYD11_02935 PF01979 Amidohydrolase family EYD11_02940 PF03610 PTS system fructose IIA component EYD11_02945 PF03613 PTS system mannose/fructose/sorbose family IID component EYD11_02950 PF03609 PTS system sorbose-specific iic component EYD11_02955 PF03830 PTS system sorbose subfamily IIB component EYD11_02960 PF08013 Tagatose 6 phosphate kinase EYD11_02965 PF08220 DeoR-like helix-turn-helix domain EYD11_02965 PF00455 DeoR C terminal sensor domain EYD11_02970 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system EYD11_02975 PF15937 prlF antitoxin for toxin YhaV_toxin EYD11_02980 PF08666 SAF domain EYD11_02980 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EYD11_02985 PF07690 Major Facilitator Superfamily EYD11_02990 PF03328 HpcH/HpaI aldolase/citrate lyase family EYD11_02995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD11_02995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD11_03000 PF02595 Glycerate kinase family EYD11_03025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_03025 PF03466 LysR substrate binding domain EYD11_03040 PF05656 Protein of unknown function (DUF805) EYD11_03045 PF13409 Glutathione S-transferase, N-terminal domain EYD11_03050 PF07681 DoxX EYD11_03055 PF13997 YqjK-like protein EYD11_03060 PF07332 Putative Actinobacterial Holin-X, holin superfamily III EYD11_03065 PF05957 Bacterial protein of unknown function (DUF883) EYD11_03070 PF06476 Protein of unknown function (DUF1090) EYD11_03075 PF13721 SecD export protein N-terminal TM region EYD11_03080 PF09335 SNARE associated Golgi protein EYD11_03085 PF07729 FCD domain EYD11_03085 PF00392 Bacterial regulatory proteins, gntR family EYD11_03090 PF07690 Major Facilitator Superfamily EYD11_03095 PF02614 Glucuronate isomerase EYD11_03100 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EYD11_03100 PF08666 SAF domain EYD11_03105 PF10688 Bacterial inner membrane protein EYD11_03110 PF00375 Sodium:dicarboxylate symporter family EYD11_03115 PF03741 Integral membrane protein TerC family EYD11_03120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD11_03125 PF02698 DUF218 domain EYD11_03130 PF01863 Protein of unknown function DUF45 EYD11_03135 PF05175 Methyltransferase small domain EYD11_03140 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system EYD11_03145 PF01381 Helix-turn-helix EYD11_03150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EYD11_03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_03155 PF01204 Trehalase EYD11_03165 PF13520 Amino acid permease EYD11_03170 PF04074 YhcH/YjgK/YiaL EYD11_03175 PF02837 Glycosyl hydrolases family 2, sugar binding domain EYD11_03175 PF02929 Beta galactosidase small chain EYD11_03175 PF00703 Glycosyl hydrolases family 2 EYD11_03175 PF16353 Domain of unknown function(DUF4981) EYD11_03175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EYD11_03180 PF00356 Bacterial regulatory proteins, lacI family EYD11_03185 PF01588 Putative tRNA binding domain EYD11_03190 PF00202 Aminotransferase class-III EYD11_03195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD11_03195 PF08447 PAS fold EYD11_03200 PF03551 Transcriptional regulator PadR-like family EYD11_03205 PF08021 Siderophore-interacting FAD-binding domain EYD11_03205 PF04954 Siderophore-interacting protein EYD11_03215 PF03167 Uracil DNA glycosylase superfamily EYD11_03220 PF04545 Sigma-70, region 4 EYD11_03220 PF04539 Sigma-70 region 3 EYD11_03220 PF04542 Sigma-70 region 2 EYD11_03220 PF00140 Sigma-70 factor, region 1.2 EYD11_03220 PF04546 Sigma-70, non-essential region EYD11_03220 PF03979 Sigma-70 factor, region 1.1 EYD11_03225 PF08275 DNA primase catalytic core, N-terminal domain EYD11_03225 PF01807 CHC2 zinc finger EYD11_03225 PF10410 DnaB-helicase binding domain of primase EYD11_03225 PF08278 DNA primase DnaG DnaB-binding EYD11_03230 PF01165 Ribosomal protein S21 EYD11_03235 PF00814 Glycoprotease family EYD11_03240 PF00939 Sodium:sulfate symporter transmembrane region EYD11_03245 PF05683 Fumarase C-terminus EYD11_03250 PF05681 Fumarate hydratase (Fumerase) EYD11_03255 PF03466 LysR substrate binding domain EYD11_03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_03260 PF02660 Glycerol-3-phosphate acyltransferase EYD11_03265 PF02152 Dihydroneopterin aldolase EYD11_03270 PF02673 Bacitracin resistance protein BacA EYD11_03275 PF01966 HD domain EYD11_03275 PF01743 Poly A polymerase head domain EYD11_03275 PF12627 Probable RNA and SrmB- binding site of polymerase A EYD11_03280 PF08239 Bacterial SH3 domain EYD11_03285 PF01928 CYTH domain EYD11_03290 PF08335 GlnD PII-uridylyltransferase EYD11_03290 PF03710 Glutamate-ammonia ligase adenylyltransferase EYD11_03295 PF00294 pfkB family carbohydrate kinase EYD11_03295 PF01467 Cytidylyltransferase-like EYD11_03310 PF01145 SPFH domain / Band 7 family EYD11_03310 PF15975 Flotillin EYD11_03315 PF07290 Protein of unknown function (DUF1449) EYD11_03320 PF08971 Glycogen synthesis protein EYD11_03330 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_03330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_03335 PF00577 Outer membrane usher protein EYD11_03335 PF13954 PapC N-terminal domain EYD11_03335 PF13953 PapC C-terminal domain EYD11_03340 PF13737 Transposase DDE domain EYD11_03350 PF00419 Fimbrial protein EYD11_03355 PF04380 Membrane fusogenic activity EYD11_03360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EYD11_03365 PF02535 ZIP Zinc transporter EYD11_03370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EYD11_03375 PF03738 Glutathionylspermidine synthase preATP-grasp EYD11_03380 PF06693 Protein of unknown function (DUF1190) EYD11_03385 PF02321 Outer membrane efflux protein EYD11_03390 PF00293 NUDIX domain EYD11_03395 PF06853 Protein of unknown function (DUF1249) EYD11_03400 PF00149 Calcineurin-like phosphoesterase EYD11_03405 PF05728 Uncharacterised protein family (UPF0227) EYD11_03410 PF00986 DNA gyrase B subunit, carboxyl terminus EYD11_03410 PF01751 Toprim domain EYD11_03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_03410 PF00204 DNA gyrase B EYD11_03415 PF03992 Antibiotic biosynthesis monooxygenase EYD11_03420 PF02525 Flavodoxin-like fold EYD11_03425 PF10840 Protein of unknown function (DUF2645) EYD11_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_03430 PF00512 His Kinase A (phospho-acceptor) domain EYD11_03430 PF08521 Two-component sensor kinase N-terminal EYD11_03435 PF00072 Response regulator receiver domain EYD11_03435 PF00486 Transcriptional regulatory protein, C terminal EYD11_03440 PF04076 Bacterial OB fold (BOF) protein EYD11_03445 PF06445 GyrI-like small molecule binding domain EYD11_03450 PF15723 Motility quorum-sensing regulator, toxin of MqsA EYD11_03455 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA EYD11_03460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_03465 PF00521 DNA gyrase/topoisomerase IV, subunit A EYD11_03465 PF03989 DNA gyrase C-terminal domain, beta-propeller EYD11_03470 PF01553 Acyltransferase EYD11_03475 PF00394 Multicopper oxidase EYD11_03475 PF07731 Multicopper oxidase EYD11_03475 PF07732 Multicopper oxidase EYD11_03480 PF11842 Domain of unknown function (DUF3362) EYD11_03480 PF08497 Radical SAM N-terminal EYD11_03480 PF04055 Radical SAM superfamily EYD11_03485 PF04728 Lipoprotein leucine-zipper EYD11_03490 PF12883 Protein of unknown function (DUF3828) EYD11_03495 PF00248 Aldo/keto reductase family EYD11_03500 PF00465 Iron-containing alcohol dehydrogenase EYD11_03505 PF12833 Helix-turn-helix domain EYD11_03505 PF06719 AraC-type transcriptional regulator N-terminus EYD11_03510 PF09335 SNARE associated Golgi protein EYD11_03515 PF01053 Cys/Met metabolism PLP-dependent enzyme EYD11_03520 PF01618 MotA/TolQ/ExbB proton channel family EYD11_03525 PF02472 Biopolymer transport protein ExbD/TolR EYD11_03535 PF03350 Uncharacterized protein family, UPF0114 EYD11_03540 PF00248 Aldo/keto reductase family EYD11_03550 PF11115 Protein of unknown function (DUF2623) EYD11_03555 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EYD11_03555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYD11_03560 PF13247 4Fe-4S dicluster domain EYD11_03565 PF03916 Polysulphide reductase, NrfD EYD11_03570 PF00374 Nickel-dependent hydrogenase EYD11_03575 PF01750 Hydrogenase maturation protease EYD11_03580 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE EYD11_03585 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EYD11_03590 PF01455 HupF/HypC family EYD11_03595 PF02798 Glutathione S-transferase, N-terminal domain EYD11_03600 PF03738 Glutathionylspermidine synthase preATP-grasp EYD11_03600 PF05257 CHAP domain EYD11_03605 PF01384 Phosphate transporter family EYD11_03625 PF01943 Polysaccharide biosynthesis protein EYD11_03635 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) EYD11_03640 PF03739 Lipopolysaccharide export system permease LptF/LptG EYD11_03650 PF00155 Aminotransferase class I and II EYD11_03655 PF00550 Phosphopantetheine attachment site EYD11_03665 PF00501 AMP-binding enzyme EYD11_03665 PF14535 AMP-binding enzyme C-terminal domain EYD11_03675 PF00392 Bacterial regulatory proteins, gntR family EYD11_03675 PF07729 FCD domain EYD11_03680 PF02913 FAD linked oxidases, C-terminal domain EYD11_03680 PF01565 FAD binding domain EYD11_03685 PF01565 FAD binding domain EYD11_03690 PF13183 4Fe-4S dicluster domain EYD11_03690 PF02754 Cysteine-rich domain EYD11_03695 PF03928 Haem-degrading EYD11_03700 PF01274 Malate synthase EYD11_03705 PF02652 L-lactate permease EYD11_03710 PF17291 N-terminal domain of M60-like peptidases EYD11_03710 PF13402 Peptidase M60, enhancin and enhancin-like EYD11_03710 PF13322 Domain of unknown function (DUF4092) EYD11_03715 PF06750 Bacterial Peptidase A24 N-terminal domain EYD11_03715 PF01478 Type IV leader peptidase family EYD11_03720 PF16549 Type II secretion system (T2SS) pilotin, S protein EYD11_03725 PF11356 Type II secretion system protein C EYD11_03730 PF00263 Bacterial type II and III secretion system protein EYD11_03730 PF03958 Bacterial type II/III secretion system short domain EYD11_03740 PF00482 Type II secretion system (T2SS), protein F EYD11_03745 PF08334 Type II secretion system (T2SS), protein G EYD11_03745 PF07963 Prokaryotic N-terminal methylation motif EYD11_03750 PF07963 Prokaryotic N-terminal methylation motif EYD11_03755 PF02501 Type II secretion system (T2SS), protein I EYD11_03755 PF07963 Prokaryotic N-terminal methylation motif EYD11_03760 PF11612 Type II secretion system (T2SS), protein J EYD11_03760 PF07963 Prokaryotic N-terminal methylation motif EYD11_03765 PF03934 Type II secretion system (T2SS), protein K EYD11_03770 PF12693 GspL periplasmic domain EYD11_03775 PF04612 Type II secretion system (T2SS), protein M EYD11_03795 PF06755 CbtA_toxin of type IV toxin-antitoxin system EYD11_03800 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A EYD11_03805 PF06174 Protein of unknown function (DUF987) EYD11_03810 PF04002 RadC-like JAB domain EYD11_03815 PF03230 Antirestriction protein EYD11_03820 PF06067 Domain of unknown function (DUF932) EYD11_03825 PF06006 Bacterial protein of unknown function (DUF905) EYD11_03835 PF08220 DeoR-like helix-turn-helix domain EYD11_03835 PF13280 WYL domain EYD11_03840 PF01926 50S ribosome-binding GTPase EYD11_03875 PF14602 Hexapeptide repeat of succinyl-transferase EYD11_03875 PF12804 MobA-like NTP transferase domain EYD11_03875 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_03880 PF00294 pfkB family carbohydrate kinase EYD11_03885 PF04227 Indigoidine synthase A like protein EYD11_03890 PF01773 Na+ dependent nucleoside transporter N-terminus EYD11_03890 PF07662 Na+ dependent nucleoside transporter C-terminus EYD11_03895 PF00294 pfkB family carbohydrate kinase EYD11_03930 PF08361 MAATS-type transcriptional repressor, C-terminal region EYD11_03930 PF00440 Bacterial regulatory proteins, tetR family EYD11_03940 PF00936 BMC domain EYD11_03945 PF02773 S-adenosylmethionine synthetase, C-terminal domain EYD11_03945 PF02772 S-adenosylmethionine synthetase, central domain EYD11_03945 PF00438 S-adenosylmethionine synthetase, N-terminal domain EYD11_03950 PF12833 Helix-turn-helix domain EYD11_03955 PF00672 HAMP domain EYD11_03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_03955 PF06580 Histidine kinase EYD11_03955 PF02743 Cache domain EYD11_03965 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EYD11_03985 PF13187 4Fe-4S dicluster domain EYD11_03985 PF04055 Radical SAM superfamily EYD11_03995 PF01965 DJ-1/PfpI family EYD11_04005 PF00171 Aldehyde dehydrogenase family EYD11_04010 PF00936 BMC domain EYD11_04015 PF00936 BMC domain EYD11_04020 PF00871 Acetokinase family EYD11_04025 PF03928 Haem-degrading EYD11_04030 PF03319 Ethanolamine utilisation protein EutN/carboxysome EYD11_04045 PF06130 Phosphate propanoyltransferase EYD11_04050 PF00465 Iron-containing alcohol dehydrogenase EYD11_04100 PF01507 Phosphoadenosine phosphosulfate reductase family EYD11_04100 PF11922 Domain of unknown function (DUF3440) EYD11_04105 PF02195 ParB-like nuclease domain EYD11_04125 PF00271 Helicase conserved C-terminal domain EYD11_04125 PF08494 DEAD/H associated EYD11_04125 PF00270 DEAD/DEAH box helicase EYD11_04145 PF13505 Outer membrane protein beta-barrel domain EYD11_04150 PF00884 Sulfatase EYD11_04155 PF00589 Phage integrase family EYD11_04155 PF13356 Arm DNA-binding domain EYD11_04165 PF04474 Protein of unknown function (DUF554) EYD11_04170 PF01276 Orn/Lys/Arg decarboxylase, major domain EYD11_04170 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EYD11_04170 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EYD11_04175 PF03825 Nucleoside H+ symporter EYD11_04180 PF01464 Transglycosylase SLT domain EYD11_04180 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EYD11_04185 PF04362 Bacterial Fe(2+) trafficking EYD11_04190 PF00730 HhH-GPD superfamily base excision DNA repair protein EYD11_04190 PF14815 NUDIX domain EYD11_04190 PF00633 Helix-hairpin-helix motif EYD11_04190 PF10576 Iron-sulfur binding domain of endonuclease III EYD11_04195 PF02390 Putative methyltransferase EYD11_04200 PF04320 Protein with unknown function (DUF469) EYD11_04205 PF11101 Protein of unknown function (DUF2884) EYD11_04210 PF17763 Glutaminase/Asparaginase C-terminal domain EYD11_04210 PF00710 Asparaginase, N-terminal EYD11_04215 PF06717 Protein of unknown function (DUF1202) EYD11_04220 PF04055 Radical SAM superfamily EYD11_04220 PF06969 HemN C-terminal domain EYD11_04225 PF01725 Ham1 family EYD11_04230 PF02594 Uncharacterised ACR, YggU family COG1872 EYD11_04235 PF02325 YGGT family EYD11_04240 PF01168 Alanine racemase, N-terminal domain EYD11_04245 PF00437 Type II/IV secretion system protein EYD11_04250 PF03652 Holliday junction resolvase EYD11_04255 PF02622 Uncharacterized ACR, COG1678 EYD11_04260 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EYD11_04260 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EYD11_04265 PF04452 RNA methyltransferase EYD11_04270 PF04231 Endonuclease I EYD11_04275 PF17283 SprT-like zinc ribbon domain EYD11_04275 PF10263 SprT-like family EYD11_04280 PF00083 Sugar (and other) transporter EYD11_04285 PF02773 S-adenosylmethionine synthetase, C-terminal domain EYD11_04285 PF02772 S-adenosylmethionine synthetase, central domain EYD11_04285 PF00438 S-adenosylmethionine synthetase, N-terminal domain EYD11_04295 PF17430 Uncharacterized YqgC-like EYD11_04300 PF11036 Virulence promoting factor EYD11_04305 PF17810 Arginine decarboxylase helical bundle domain EYD11_04305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EYD11_04305 PF17944 Arginine decarboxylase C-terminal helical extension EYD11_04310 PF00491 Arginase family EYD11_04315 PF01435 Peptidase family M48 EYD11_04320 PF02779 Transketolase, pyrimidine binding domain EYD11_04320 PF02780 Transketolase, C-terminal domain EYD11_04320 PF00456 Transketolase, thiamine diphosphate binding domain EYD11_04325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_04330 PF02378 Phosphotransferase system, EIIC EYD11_04330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_04335 PF00107 Zinc-binding dehydrogenase EYD11_04335 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_04340 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EYD11_04345 PF05068 Mannitol repressor EYD11_04355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EYD11_04355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EYD11_04360 PF00162 Phosphoglycerate kinase EYD11_04365 PF01116 Fructose-bisphosphate aldolase class-II EYD11_04370 PF05552 Conserved TM helix EYD11_04370 PF00924 Mechanosensitive ion channel EYD11_04375 PF01810 LysE type translocator EYD11_04380 PF04402 Protein of unknown function (DUF541) EYD11_04385 PF03466 LysR substrate binding domain EYD11_04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_04390 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EYD11_04390 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EYD11_04395 PF00378 Enoyl-CoA hydratase/isomerase EYD11_04405 PF01642 Methylmalonyl-CoA mutase EYD11_04405 PF02310 B12 binding domain EYD11_04410 PF03466 LysR substrate binding domain EYD11_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_04415 PF03466 LysR substrate binding domain EYD11_04420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EYD11_04425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD11_04425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD11_04425 PF01842 ACT domain EYD11_04435 PF01812 5-formyltetrahydrofolate cyclo-ligase family EYD11_04445 PF05164 Cell division protein ZapA EYD11_04450 PF03695 Uncharacterised protein family (UPF0149) EYD11_04455 PF00557 Metallopeptidase family M24 EYD11_04455 PF05195 Aminopeptidase P, N-terminal domain EYD11_04460 PF01494 FAD binding domain EYD11_04465 PF01494 FAD binding domain EYD11_04475 PF01571 Aminomethyltransferase folate-binding domain EYD11_04475 PF08669 Glycine cleavage T-protein C-terminal barrel domain EYD11_04480 PF01597 Glycine cleavage H-protein EYD11_04485 PF02347 Glycine cleavage system P-protein EYD11_04495 PF00232 Glycosyl hydrolase family 1 EYD11_04505 PF03006 Haemolysin-III related EYD11_04510 PF01571 Aminomethyltransferase folate-binding domain EYD11_04515 PF03937 Flavinator of succinate dehydrogenase EYD11_04520 PF07254 Membrane-bound toxin component of toxin-antitoxin system EYD11_04525 PF00258 Flavodoxin EYD11_04530 PF00589 Phage integrase family EYD11_04530 PF02899 Phage integrase, N-terminal SAM-like domain EYD11_04535 PF10411 Disulfide bond isomerase protein N-terminus EYD11_04535 PF13098 Thioredoxin-like domain EYD11_04540 PF01368 DHH family EYD11_04540 PF17768 RecJ OB domain EYD11_04540 PF02272 DHHA1 domain EYD11_04550 PF01336 OB-fold nucleic acid binding domain EYD11_04550 PF00152 tRNA synthetases class II (D, K and N) EYD11_04555 PF00293 NUDIX domain EYD11_04570 PF00860 Permease family EYD11_04580 PF13247 4Fe-4S dicluster domain EYD11_04585 PF00860 Permease family EYD11_04590 PF01979 Amidohydrolase family EYD11_04595 PF00860 Permease family EYD11_04600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EYD11_04600 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EYD11_04600 PF01799 [2Fe-2S] binding domain EYD11_04605 PF00941 FAD binding domain in molybdopterin dehydrogenase EYD11_04610 PF01979 Amidohydrolase family EYD11_04615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EYD11_04615 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_04620 PF12804 MobA-like NTP transferase domain EYD11_04630 PF02625 XdhC and CoxI family EYD11_04630 PF13478 XdhC Rossmann domain EYD11_04635 PF00696 Amino acid kinase family EYD11_04640 PF01979 Amidohydrolase family EYD11_04645 PF07687 Peptidase dimerisation domain EYD11_04645 PF01546 Peptidase family M20/M25/M40 EYD11_04650 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_04655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EYD11_04655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EYD11_04665 PF01799 [2Fe-2S] binding domain EYD11_04665 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_04670 PF03450 CO dehydrogenase flavoprotein C-terminal domain EYD11_04670 PF00941 FAD binding domain in molybdopterin dehydrogenase EYD11_04675 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EYD11_04675 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EYD11_04680 PF01476 LysM domain EYD11_04680 PF01551 Peptidase family M23 EYD11_04690 PF02899 Phage integrase, N-terminal SAM-like domain EYD11_04690 PF00589 Phage integrase family EYD11_04715 PF00665 Integrase core domain EYD11_04720 PF01695 IstB-like ATP binding protein EYD11_04735 PF01609 Transposase DDE domain EYD11_04745 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYD11_04750 PF00813 FliP family EYD11_04755 PF01313 Bacterial export proteins, family 3 EYD11_04760 PF01311 Bacterial export proteins, family 1 EYD11_04765 PF01312 FlhB HrpN YscU SpaS Family EYD11_04770 PF01312 FlhB HrpN YscU SpaS Family EYD11_04785 PF09480 Type III secretion system protein PrgH-EprH (PrgH) EYD11_04790 PF09480 Type III secretion system protein PrgH-EprH (PrgH) EYD11_04795 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF EYD11_04805 PF01514 Secretory protein of YscJ/FliF family EYD11_04810 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) EYD11_04825 PF01464 Transglycosylase SLT domain EYD11_04835 PF00486 Transcriptional regulatory protein, C terminal EYD11_04840 PF07720 Tetratricopeptide repeat EYD11_04865 PF00486 Transcriptional regulatory protein, C terminal EYD11_04870 PF00196 Bacterial regulatory proteins, luxR family EYD11_04875 PF03222 Tryptophan/tyrosine permease family EYD11_04880 PF00108 Thiolase, N-terminal domain EYD11_04880 PF02803 Thiolase, C-terminal domain EYD11_04885 PF04962 KduI/IolB family EYD11_04895 PF00083 Sugar (and other) transporter EYD11_04900 PF01177 Asp/Glu/Hydantoin racemase EYD11_04905 PF03466 LysR substrate binding domain EYD11_04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_04910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EYD11_04910 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EYD11_04915 PF00356 Bacterial regulatory proteins, lacI family EYD11_04920 PF01553 Acyltransferase EYD11_04920 PF00501 AMP-binding enzyme EYD11_04925 PF07690 Major Facilitator Superfamily EYD11_04930 PF00248 Aldo/keto reductase family EYD11_04935 PF06004 Bacterial protein of unknown function (DUF903) EYD11_04940 PF03741 Integral membrane protein TerC family EYD11_04945 PF02976 DNA mismatch repair enzyme MutH EYD11_04955 PF00293 NUDIX domain EYD11_04960 PF01590 GAF domain EYD11_04960 PF02896 PEP-utilising enzyme, TIM barrel domain EYD11_04960 PF00391 PEP-utilising enzyme, mobile domain EYD11_04960 PF05524 PEP-utilising enzyme, N-terminal EYD11_04965 PF01790 Prolipoprotein diacylglyceryl transferase EYD11_04970 PF00303 Thymidylate synthase EYD11_04975 PF07963 Prokaryotic N-terminal methylation motif EYD11_04980 PF07963 Prokaryotic N-terminal methylation motif EYD11_04985 PF10713 Protein of unknown function (DUF2509) EYD11_04990 PF07963 Prokaryotic N-terminal methylation motif EYD11_04990 PF12528 Type II secretion prepilin peptidase dependent protein C EYD11_04995 PF17946 RecC C-terminal domain EYD11_05000 PF00675 Insulinase (Peptidase family M16) EYD11_05000 PF05193 Peptidase M16 inactive domain EYD11_05000 PF16187 Middle or third domain of peptidase_M16 EYD11_05005 PF00580 UvrD/REP helicase N-terminal domain EYD11_05005 PF13361 UvrD-like helicase C-terminal domain EYD11_05005 PF12705 PD-(D/E)XK nuclease superfamily EYD11_05010 PF13538 UvrD-like helicase C-terminal domain EYD11_05015 PF00583 Acetyltransferase (GNAT) family EYD11_05015 PF00696 Amino acid kinase family EYD11_05020 PF01520 N-acetylmuramoyl-L-alanine amidase EYD11_05020 PF11741 AMIN domain EYD11_05040 PF03562 MltA specific insert domain EYD11_05040 PF06725 3D domain EYD11_05045 PF00899 ThiF family EYD11_05050 PF02657 Fe-S metabolism associated domain EYD11_05055 PF00266 Aminotransferase class-V EYD11_05060 PF06004 Bacterial protein of unknown function (DUF903) EYD11_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_05065 PF03466 LysR substrate binding domain EYD11_05070 PF04241 Protein of unknown function (DUF423) EYD11_05075 PF18125 RlmM ferredoxin-like domain EYD11_05075 PF01728 FtsJ-like methyltransferase EYD11_05080 PF00455 DeoR C terminal sensor domain EYD11_05080 PF08220 DeoR-like helix-turn-helix domain EYD11_05085 PF05025 RbsD / FucU transport protein family EYD11_05090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD11_05090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_05095 PF07881 L-fucose isomerase, first N-terminal domain EYD11_05095 PF07882 L-fucose isomerase, second N-terminal domain EYD11_05095 PF02952 L-fucose isomerase, C-terminal domain EYD11_05100 PF07690 Major Facilitator Superfamily EYD11_05105 PF00596 Class II Aldolase and Adducin N-terminal domain EYD11_05110 PF00465 Iron-containing alcohol dehydrogenase EYD11_05115 PF01367 5'-3' exonuclease, C-terminal SAM fold EYD11_05115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EYD11_05120 PF03313 Serine dehydratase alpha chain EYD11_05120 PF03315 Serine dehydratase beta chain EYD11_05130 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EYD11_05130 PF03641 Possible lysine decarboxylase EYD11_05130 PF11892 Domain of unknown function (DUF3412) EYD11_05135 PF14489 QueF-like protein EYD11_05135 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EYD11_05140 PF07348 Syd protein (SUKH-2) EYD11_05145 PF04287 tRNA pseudouridine synthase C EYD11_05150 PF00849 RNA pseudouridylate synthase EYD11_05155 PF00258 Flavodoxin EYD11_05160 PF07690 Major Facilitator Superfamily EYD11_05165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD11_05165 PF13378 Enolase C-terminal domain-like EYD11_05170 PF13378 Enolase C-terminal domain-like EYD11_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_05175 PF01627 Hpt domain EYD11_05175 PF00512 His Kinase A (phospho-acceptor) domain EYD11_05175 PF00072 Response regulator receiver domain EYD11_05175 PF00672 HAMP domain EYD11_05175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EYD11_05180 PF05958 tRNA (Uracil-5-)-methyltransferase EYD11_05180 PF01938 TRAM domain EYD11_05185 PF02824 TGS domain EYD11_05185 PF13291 ACT domain EYD11_05185 PF04607 Region found in RelA / SpoT proteins EYD11_05190 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EYD11_05195 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EYD11_05200 PF03819 MazG nucleotide pyrophosphohydrolase domain EYD11_05205 PF00117 Glutamine amidotransferase class-I EYD11_05205 PF06418 CTP synthase N-terminus EYD11_05210 PF03952 Enolase, N-terminal domain EYD11_05210 PF00113 Enolase, C-terminal TIM barrel domain EYD11_05215 PF04536 TPM domain EYD11_05225 PF04055 Radical SAM superfamily EYD11_05230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD11_05230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_05235 PF07690 Major Facilitator Superfamily EYD11_05245 PF01565 FAD binding domain EYD11_05245 PF02913 FAD linked oxidases, C-terminal domain EYD11_05250 PF00083 Sugar (and other) transporter EYD11_05255 PF01012 Electron transfer flavoprotein domain EYD11_05260 PF00766 Electron transfer flavoprotein FAD-binding domain EYD11_05260 PF01012 Electron transfer flavoprotein domain EYD11_05265 PF04309 Glycerol-3-phosphate responsive antiterminator EYD11_05275 PF01266 FAD dependent oxidoreductase EYD11_05280 PF01242 6-pyruvoyl tetrahydropterin synthase EYD11_05285 PF00667 FAD binding domain EYD11_05285 PF00175 Oxidoreductase NAD-binding domain EYD11_05285 PF00258 Flavodoxin EYD11_05290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EYD11_05290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EYD11_05295 PF01507 Phosphoadenosine phosphosulfate reductase family EYD11_05305 PF18019 HD domain EYD11_05305 PF00270 DEAD/DEAH box helicase EYD11_05305 PF00271 Helicase conserved C-terminal domain EYD11_05310 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) EYD11_05315 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) EYD11_05320 PF09344 CT1975-like protein EYD11_05325 PF09704 CRISPR-associated protein (Cas_Cas5) EYD11_05330 PF08798 CRISPR associated protein EYD11_05335 PF01867 CRISPR associated protein Cas1 EYD11_05340 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) EYD11_05345 PF04389 Peptidase family M28 EYD11_05350 PF01507 Phosphoadenosine phosphosulfate reductase family EYD11_05355 PF00009 Elongation factor Tu GTP binding domain EYD11_05365 PF12084 Protein of unknown function (DUF3561) EYD11_05370 PF04977 Septum formation initiator EYD11_05375 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EYD11_05380 PF02542 YgbB family EYD11_05385 PF01142 tRNA pseudouridine synthase D (TruD) EYD11_05390 PF01975 Survival protein SurE EYD11_05400 PF01476 LysM domain EYD11_05400 PF01551 Peptidase family M23 EYD11_05405 PF04542 Sigma-70 region 2 EYD11_05405 PF00140 Sigma-70 factor, region 1.2 EYD11_05405 PF04539 Sigma-70 region 3 EYD11_05405 PF04545 Sigma-70, region 4 EYD11_05410 PF02447 GntP family permease EYD11_05415 PF01261 Xylose isomerase-like TIM barrel EYD11_05420 PF00596 Class II Aldolase and Adducin N-terminal domain EYD11_05425 PF17042 Nucleotide-binding C-terminal domain EYD11_05425 PF07005 Sugar-binding N-terminal domain EYD11_05430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD11_05430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD11_05435 PF08220 DeoR-like helix-turn-helix domain EYD11_05435 PF00455 DeoR C terminal sensor domain EYD11_05440 PF00149 Calcineurin-like phosphoesterase EYD11_05445 PF01624 MutS domain I EYD11_05445 PF05188 MutS domain II EYD11_05445 PF05192 MutS domain III EYD11_05445 PF05190 MutS family domain IV EYD11_05445 PF00488 MutS domain V EYD11_05450 PF11756 Nitrous oxide-stimulated promoter EYD11_05455 PF00158 Sigma-54 interaction domain EYD11_05455 PF01590 GAF domain EYD11_05460 PF02769 AIR synthase related protein, C-terminal domain EYD11_05460 PF00586 AIR synthase related protein, N-terminal domain EYD11_05465 PF01924 Hydrogenase formation hypA family EYD11_05470 PF01455 HupF/HypC family EYD11_05475 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD11_05480 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EYD11_05490 PF11046 Transcriptional repressor of hyc and hyp operons EYD11_05495 PF13247 4Fe-4S dicluster domain EYD11_05500 PF00361 Proton-conducting membrane transporter EYD11_05505 PF00146 NADH dehydrogenase EYD11_05510 PF00374 Nickel-dependent hydrogenase EYD11_05510 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EYD11_05510 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EYD11_05515 PF12838 4Fe-4S dicluster domain EYD11_05520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYD11_05525 PF07450 Formate hydrogenlyase maturation protein HycH EYD11_05530 PF01750 Hydrogenase maturation protease EYD11_05535 PF00232 Glycosyl hydrolase family 1 EYD11_05540 PF02378 Phosphotransferase system, EIIC EYD11_05540 PF00367 phosphotransferase system, EIIB EYD11_05545 PF00356 Bacterial regulatory proteins, lacI family EYD11_05550 PF12800 4Fe-4S binding domain EYD11_05550 PF13247 4Fe-4S dicluster domain EYD11_05555 PF00708 Acylphosphatase EYD11_05555 PF01300 Telomere recombination EYD11_05555 PF17788 HypF Kae1-like domain EYD11_05555 PF07503 HypF finger EYD11_05560 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_05560 PF18113 Rubredoxin binding C-terminal domain EYD11_05565 PF00301 Rubredoxin EYD11_05565 PF00753 Metallo-beta-lactamase superfamily EYD11_05565 PF00258 Flavodoxin EYD11_05570 PF00158 Sigma-54 interaction domain EYD11_05570 PF01590 GAF domain EYD11_05575 PF00571 CBS domain EYD11_05575 PF01380 SIS domain EYD11_05580 PF08220 DeoR-like helix-turn-helix domain EYD11_05580 PF00455 DeoR C terminal sensor domain EYD11_05585 PF06923 Glucitol operon activator protein (GutM) EYD11_05590 PF00106 short chain dehydrogenase EYD11_05595 PF03829 PTS system glucitol/sorbitol-specific IIA component EYD11_05600 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EYD11_05600 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EYD11_05605 PF03608 PTS system enzyme II sorbitol-specific factor EYD11_05610 PF13406 Transglycosylase SLT domain EYD11_05615 PF02464 Competence-damaged protein EYD11_05620 PF00154 recA bacterial DNA recombination protein EYD11_05625 PF02631 RecX family EYD11_05630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EYD11_05630 PF01411 tRNA synthetases class II (A) EYD11_05630 PF02272 DHHA1 domain EYD11_05635 PF02599 Global regulator protein family EYD11_05665 PF13419 Haloacid dehalogenase-like hydrolase EYD11_05670 PF09335 SNARE associated Golgi protein EYD11_05675 PF04262 Glutamate-cysteine ligase EYD11_05680 PF02664 S-Ribosylhomocysteinase (LuxS) EYD11_05685 PF07690 Major Facilitator Superfamily EYD11_05690 PF00529 HlyD membrane-fusion protein of T1SS EYD11_05690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_05695 PF01047 MarR family EYD11_05700 PF05437 Branched-chain amino acid transport protein (AzlD) EYD11_05705 PF03591 AzlC protein EYD11_05710 PF07690 Major Facilitator Superfamily EYD11_05715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EYD11_05720 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_05725 PF00571 CBS domain EYD11_05725 PF00005 ABC transporter EYD11_05735 PF00268 Ribonucleotide reductase, small chain EYD11_05740 PF02867 Ribonucleotide reductase, barrel domain EYD11_05740 PF00317 Ribonucleotide reductase, all-alpha domain EYD11_05740 PF08343 Ribonucleotide reductase N-terminal EYD11_05745 PF07972 NrdI Flavodoxin like EYD11_05750 PF00462 Glutaredoxin EYD11_05755 PF05957 Bacterial protein of unknown function (DUF883) EYD11_05760 PF09400 Protein of unknown function (DUF2002) EYD11_05765 PF06610 L-alanine exporter EYD11_05770 PF00816 H-NS histone family EYD11_05775 PF11127 Protein of unknown function (DUF2892) EYD11_05775 PF00581 Rhodanese-like domain EYD11_05780 PF01022 Bacterial regulatory protein, arsR family EYD11_05785 PF01679 Proteolipid membrane potential modulator EYD11_05790 PF01476 LysM domain EYD11_05790 PF04972 BON domain EYD11_05795 PF07729 FCD domain EYD11_05795 PF00392 Bacterial regulatory proteins, gntR family EYD11_05800 PF00324 Amino acid permease EYD11_05805 PF00202 Aminotransferase class-III EYD11_05810 PF00171 Aldehyde dehydrogenase family EYD11_05815 PF01266 FAD dependent oxidoreductase EYD11_05820 PF08943 CsiD EYD11_05830 PF00128 Alpha amylase, catalytic domain EYD11_05855 PF16168 Adhesin of bacterial autotransporter system, probable stalk EYD11_05855 PF03797 Autotransporter beta-domain EYD11_05855 PF03212 Pertactin EYD11_05865 PF01668 SmpB protein EYD11_05870 PF03364 Polyketide cyclase / dehydrase and lipid transport EYD11_05875 PF03658 RnfH family Ubiquitin EYD11_05880 PF04355 SmpA / OmlA family EYD11_05885 PF02463 RecF/RecN/SMC N terminal domain EYD11_05890 PF01513 ATP-NAD kinase EYD11_05900 PF01025 GrpE EYD11_05905 PF03471 Transporter associated domain EYD11_05905 PF00571 CBS domain EYD11_05905 PF01595 Cyclin M transmembrane N-terminal domain EYD11_05910 PF01578 Cytochrome C assembly protein EYD11_05915 PF02881 SRP54-type protein, helical bundle domain EYD11_05915 PF00448 SRP54-type protein, GTPase domain EYD11_05915 PF02978 Signal peptide binding domain EYD11_05920 PF00886 Ribosomal protein S16 EYD11_05925 PF05239 PRC-barrel domain EYD11_05925 PF01782 RimM N-terminal domain EYD11_05930 PF01746 tRNA (Guanine-1)-methyltransferase EYD11_05935 PF01245 Ribosomal protein L19 EYD11_05940 PF00691 OmpA family EYD11_05945 PF17152 Periplasmic sensor domain EYD11_05945 PF00990 Diguanylate cyclase, GGDEF domain EYD11_05950 PF13689 YfiR/HmsC-like EYD11_05955 PF10973 Protein of unknown function (DUF2799) EYD11_05960 PF00793 DAHP synthetase I family EYD11_05965 PF01817 Chorismate mutase type II EYD11_05965 PF02153 Prephenate dehydrogenase EYD11_05970 PF00800 Prephenate dehydratase EYD11_05970 PF01817 Chorismate mutase type II EYD11_05980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EYD11_05985 PF13525 Outer membrane lipoprotein EYD11_05990 PF00849 RNA pseudouridylate synthase EYD11_05990 PF01479 S4 domain EYD11_06000 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_06000 PF07724 AAA domain (Cdc48 subfamily) EYD11_06000 PF17871 AAA lid domain EYD11_06000 PF02861 Clp amino terminal domain, pathogenicity island component EYD11_06000 PF10431 C-terminal, D2-small domain, of ClpB protein EYD11_06025 PF00083 Sugar (and other) transporter EYD11_06030 PF10043 Predicted periplasmic lipoprotein (DUF2279) EYD11_06035 PF13091 PLD-like domain EYD11_06040 PF13380 CoA binding domain EYD11_06040 PF13607 Succinyl-CoA ligase like flavodoxin domain EYD11_06040 PF00583 Acetyltransferase (GNAT) family EYD11_06050 PF00085 Thioredoxin EYD11_06055 PF08032 RNA 2'-O ribose methyltransferase substrate binding EYD11_06055 PF00588 SpoU rRNA Methylase family EYD11_06060 PF03167 Uracil DNA glycosylase superfamily EYD11_06065 PF01228 Glycine radical EYD11_06070 PF01810 LysE type translocator EYD11_06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_06075 PF03466 LysR substrate binding domain EYD11_06080 PF00270 DEAD/DEAH box helicase EYD11_06080 PF00271 Helicase conserved C-terminal domain EYD11_06085 PF05175 Methyltransferase small domain EYD11_06090 PF00890 FAD binding domain EYD11_06090 PF02910 Fumarate reductase flavoprotein C-term EYD11_06100 PF04542 Sigma-70 region 2 EYD11_06100 PF08281 Sigma-70, region 4 EYD11_06105 PF03872 Anti sigma-E protein RseA, N-terminal domain EYD11_06105 PF03873 Anti sigma-E protein RseA, C-terminal domain EYD11_06110 PF17188 MucB/RseB C-terminal domain EYD11_06110 PF03888 MucB/RseB N-terminal domain EYD11_06120 PF06421 GTP-binding protein LepA C-terminus EYD11_06120 PF03144 Elongation factor Tu domain 2 EYD11_06120 PF00679 Elongation factor G C-terminus EYD11_06120 PF00009 Elongation factor Tu GTP binding domain EYD11_06125 PF10502 Signal peptidase, peptidase S26 EYD11_06130 PF00035 Double-stranded RNA binding motif EYD11_06130 PF14622 Ribonuclease-III-like EYD11_06135 PF07650 KH domain EYD11_06135 PF01926 50S ribosome-binding GTPase EYD11_06140 PF02565 Recombination protein O C terminal EYD11_06140 PF11967 Recombination protein O N terminal EYD11_06145 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EYD11_06150 PF01648 4'-phosphopantetheinyl transferase superfamily EYD11_06160 PF12838 4Fe-4S dicluster domain EYD11_06165 PF01380 SIS domain EYD11_06165 PF01418 Helix-turn-helix domain, rpiR family EYD11_06175 PF14437 MafB19-like deaminase EYD11_06180 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_06180 PF01464 Transglycosylase SLT domain EYD11_06185 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EYD11_06185 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EYD11_06185 PF02769 AIR synthase related protein, C-terminal domain EYD11_06190 PF00512 His Kinase A (phospho-acceptor) domain EYD11_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_06195 PF13942 YfhG lipoprotein EYD11_06200 PF00158 Sigma-54 interaction domain EYD11_06200 PF00072 Response regulator receiver domain EYD11_06205 PF00543 Nitrogen regulatory protein P-II EYD11_06210 PF00175 Oxidoreductase NAD-binding domain EYD11_06210 PF00970 Oxidoreductase FAD-binding domain EYD11_06210 PF00042 Globin EYD11_06215 PF00464 Serine hydroxymethyltransferase EYD11_06220 PF00480 ROK family EYD11_06225 PF13181 Tetratricopeptide repeat EYD11_06225 PF17128 Domain of unknown function (DUF5107) EYD11_06230 PF13407 Periplasmic binding protein domain EYD11_06235 PF00005 ABC transporter EYD11_06240 PF02653 Branched-chain amino acid transport system / permease component EYD11_06245 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_06245 PF00107 Zinc-binding dehydrogenase EYD11_06250 PF01263 Aldose 1-epimerase EYD11_06255 PF07681 DoxX EYD11_06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_06260 PF14759 Reductase C-terminal EYD11_06265 PF00106 short chain dehydrogenase EYD11_06270 PF00355 Rieske [2Fe-2S] domain EYD11_06275 PF00866 Ring hydroxylating beta subunit EYD11_06280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EYD11_06280 PF00355 Rieske [2Fe-2S] domain EYD11_06285 PF03466 LysR substrate binding domain EYD11_06285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_06290 PF12832 MFS_1 like family EYD11_06295 PF00874 PRD domain EYD11_06300 PF12146 Serine aminopeptidase, S33 EYD11_06305 PF00459 Inositol monophosphatase family EYD11_06310 PF00588 SpoU rRNA Methylase family EYD11_06315 PF02082 Transcriptional regulator EYD11_06320 PF00266 Aminotransferase class-V EYD11_06325 PF01592 NifU-like N terminal domain EYD11_06330 PF01521 Iron-sulphur cluster biosynthesis EYD11_06335 PF07743 HSCB C-terminal oligomerisation domain EYD11_06340 PF00012 Hsp70 protein EYD11_06345 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_06350 PF04384 Iron-sulphur cluster assembly EYD11_06355 PF00883 Cytosol aminopeptidase family, catalytic domain EYD11_06355 PF12404 Peptidase EYD11_06360 PF07179 SseB protein N-terminal domain EYD11_06360 PF14581 SseB protein C-terminal domain EYD11_06365 PF00581 Rhodanese-like domain EYD11_06370 PF00207 Alpha-2-macroglobulin family EYD11_06370 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain EYD11_06370 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain EYD11_06370 PF17962 Bacterial macroglobulin domain 6 EYD11_06370 PF01835 MG2 domain EYD11_06370 PF07678 A-macroglobulin TED domain EYD11_06370 PF07703 Alpha-2-macroglobulin bait region domain EYD11_06370 PF11974 Bacterial alpha-2-macroglobulin MG3 domain EYD11_06370 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain EYD11_06375 PF06832 Penicillin-Binding Protein C-terminus Family EYD11_06375 PF00912 Transglycosylase EYD11_06375 PF00905 Penicillin binding protein transpeptidase domain EYD11_06380 PF00334 Nucleoside diphosphate kinase EYD11_06385 PF04055 Radical SAM superfamily EYD11_06390 PF13464 Domain of unknown function (DUF4115) EYD11_06395 PF04551 GcpE protein EYD11_06400 PF03129 Anticodon binding domain EYD11_06400 PF13393 Histidyl-tRNA synthetase EYD11_06405 PF09976 Tetratricopeptide repeat-like domain EYD11_06410 PF13360 PQQ-like domain EYD11_06415 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EYD11_06415 PF01926 50S ribosome-binding GTPase EYD11_06420 PF07191 zinc-ribbons EYD11_06425 PF02601 Exonuclease VII, large subunit EYD11_06425 PF13742 OB-fold nucleic acid binding domain EYD11_06430 PF00478 IMP dehydrogenase / GMP reductase domain EYD11_06430 PF00571 CBS domain EYD11_06435 PF00117 Glutamine amidotransferase class-I EYD11_06435 PF00958 GMP synthase C terminal domain EYD11_06435 PF02540 NAD synthase EYD11_06440 PF17358 Family of unknown function (DUF5384) EYD11_06445 PF05433 Glycine zipper 2TM domain EYD11_06450 PF11119 Protein of unknown function (DUF2633) EYD11_06455 PF00563 EAL domain EYD11_06455 PF05231 MASE1 EYD11_06460 PF02541 Ppx/GppA phosphatase family EYD11_06465 PF13090 Polyphosphate kinase C-terminal domain 2 EYD11_06465 PF13089 Polyphosphate kinase N-terminal domain EYD11_06465 PF17941 Polyphosphate kinase C-terminal domain 1 EYD11_06465 PF02503 Polyphosphate kinase middle domain EYD11_06470 PF00551 Formyl transferase EYD11_06475 PF02769 AIR synthase related protein, C-terminal domain EYD11_06475 PF00586 AIR synthase related protein, N-terminal domain EYD11_06485 PF00860 Permease family EYD11_06490 PF00308 Bacterial dnaA protein EYD11_06495 PF03960 ArsC family EYD11_06500 PF01435 Peptidase family M48 EYD11_06505 PF01594 AI-2E family transporter EYD11_06510 PF01226 Formate/nitrite transporter EYD11_06515 PF01590 GAF domain EYD11_06515 PF00158 Sigma-54 interaction domain EYD11_06520 PF07450 Formate hydrogenlyase maturation protein HycH EYD11_06525 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYD11_06530 PF12838 4Fe-4S dicluster domain EYD11_06535 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EYD11_06535 PF00374 Nickel-dependent hydrogenase EYD11_06535 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EYD11_06540 PF00361 Proton-conducting membrane transporter EYD11_06540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EYD11_06545 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EYD11_06550 PF00361 Proton-conducting membrane transporter EYD11_06550 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EYD11_06555 PF00146 NADH dehydrogenase EYD11_06560 PF00361 Proton-conducting membrane transporter EYD11_06565 PF12798 4Fe-4S binding domain EYD11_06565 PF00037 4Fe-4S binding domain EYD11_06570 PF00578 AhpC/TSA family EYD11_06575 PF01842 ACT domain EYD11_06580 PF00701 Dihydrodipicolinate synthetase family EYD11_06585 PF06804 NlpB/DapX lipoprotein EYD11_06590 PF01259 SAICAR synthetase EYD11_06595 PF04228 Putative neutral zinc metallopeptidase EYD11_06600 PF08351 Domain of unknown function (DUF1726) EYD11_06600 PF13718 GNAT acetyltransferase 2 EYD11_06600 PF17176 tRNA-binding domain EYD11_06600 PF05127 Helicase EYD11_06605 PF02230 Phospholipase/Carboxylesterase EYD11_06610 PF13980 Uncharacterised protein family (UPF0370) EYD11_06615 PF01546 Peptidase family M20/M25/M40 EYD11_06615 PF07687 Peptidase dimerisation domain EYD11_06620 PF03960 ArsC family EYD11_06630 PF00873 AcrB/AcrD/AcrF family EYD11_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_06635 PF00672 HAMP domain EYD11_06635 PF07730 Histidine kinase EYD11_06635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EYD11_06640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EYD11_06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_06640 PF13247 4Fe-4S dicluster domain EYD11_06645 PF00293 NUDIX domain EYD11_06650 PF06674 Protein of unknown function (DUF1176) EYD11_06655 PF00456 Transketolase, thiamine diphosphate binding domain EYD11_06655 PF02779 Transketolase, pyrimidine binding domain EYD11_06655 PF02780 Transketolase, C-terminal domain EYD11_06660 PF00923 Transaldolase/Fructose-6-phosphate aldolase EYD11_06665 PF00390 Malic enzyme, N-terminal domain EYD11_06665 PF03949 Malic enzyme, NAD binding domain EYD11_06665 PF01515 Phosphate acetyl/butaryl transferase EYD11_06670 PF00936 BMC domain EYD11_06675 PF10662 Ethanolamine utilisation - propanediol utilisation EYD11_06680 PF06249 Ethanolamine utilisation protein EutQ EYD11_06685 PF01923 Cobalamin adenosyltransferase EYD11_06690 PF01515 Phosphate acetyl/butaryl transferase EYD11_06695 PF00936 BMC domain EYD11_06700 PF03319 Ethanolamine utilisation protein EutN/carboxysome EYD11_06705 PF00171 Aldehyde dehydrogenase family EYD11_06715 PF00465 Iron-containing alcohol dehydrogenase EYD11_06720 PF04346 Ethanolamine utilisation protein, EutH EYD11_06725 PF06277 Ethanolamine utilisation protein EutA EYD11_06730 PF06751 Ethanolamine ammonia lyase large subunit (EutB) EYD11_06735 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EYD11_06740 PF00936 BMC domain EYD11_06745 PF16365 Ethanolamine utilization protein EutK C-terminus EYD11_06745 PF00936 BMC domain EYD11_06750 PF12833 Helix-turn-helix domain EYD11_06755 PF01218 Coproporphyrinogen III oxidase EYD11_06760 PF01520 N-acetylmuramoyl-L-alanine amidase EYD11_06765 PF00583 Acetyltransferase (GNAT) family EYD11_06770 PF11143 Protein of unknown function (DUF2919) EYD11_06775 PF06572 Protein of unknown function (DUF1131) EYD11_06780 PF04261 Dyp-type peroxidase family EYD11_06785 PF00144 Beta-lactamase EYD11_06790 PF00367 phosphotransferase system, EIIB EYD11_06790 PF02378 Phosphotransferase system, EIIC EYD11_06795 PF01380 SIS domain EYD11_06800 PF01418 Helix-turn-helix domain, rpiR family EYD11_06800 PF01380 SIS domain EYD11_06815 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_06820 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_06825 PF00005 ABC transporter EYD11_06830 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_06835 PF05406 WGR domain EYD11_06840 PF17263 Family of unknown function (DUF5329) EYD11_06845 PF08543 Phosphomethylpyrimidine kinase EYD11_06850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EYD11_06855 PF05524 PEP-utilising enzyme, N-terminal EYD11_06855 PF00391 PEP-utilising enzyme, mobile domain EYD11_06855 PF02896 PEP-utilising enzyme, TIM barrel domain EYD11_06860 PF00381 PTS HPr component phosphorylation site EYD11_06865 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_06875 PF04354 ZipA, C-terminal FtsZ-binding domain EYD11_06880 PF01653 NAD-dependent DNA ligase adenylation domain EYD11_06880 PF12826 Helix-hairpin-helix motif EYD11_06880 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EYD11_06880 PF03120 NAD-dependent DNA ligase OB-fold domain EYD11_06880 PF00533 BRCA1 C Terminus (BRCT) domain EYD11_06885 PF12843 Putative quorum-sensing-regulated virulence factor EYD11_06890 PF13593 SBF-like CPA transporter family (DUF4137) EYD11_06895 PF03466 LysR substrate binding domain EYD11_06895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_06900 PF03502 Nucleoside-specific channel-forming protein, Tsx EYD11_06905 PF01048 Phosphorylase superfamily EYD11_06910 PF03825 Nucleoside H+ symporter EYD11_06920 PF03466 LysR substrate binding domain EYD11_06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_06945 PF00749 tRNA synthetases class I (E and Q), catalytic domain EYD11_06950 PF07037 Putative transcription regulator (DUF1323) EYD11_06955 PF07037 Putative transcription regulator (DUF1323) EYD11_06970 PF05231 MASE1 EYD11_06970 PF00563 EAL domain EYD11_06975 PF01609 Transposase DDE domain EYD11_06980 PF07670 Nucleoside recognition EYD11_06980 PF01773 Na+ dependent nucleoside transporter N-terminus EYD11_06980 PF07662 Na+ dependent nucleoside transporter C-terminus EYD11_06985 PF01566 Natural resistance-associated macrophage protein EYD11_06990 PF10697 Protein of unknown function (DUF2502) EYD11_06995 PF00654 Voltage gated chloride channel EYD11_07000 PF02685 Glucokinase EYD11_07005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_07010 PF02378 Phosphotransferase system, EIIC EYD11_07015 PF01321 Creatinase/Prolidase N-terminal domain EYD11_07015 PF00557 Metallopeptidase family M24 EYD11_07020 PF05343 M42 glutamyl aminopeptidase EYD11_07025 PF00391 PEP-utilising enzyme, mobile domain EYD11_07025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_07025 PF02896 PEP-utilising enzyme, TIM barrel domain EYD11_07025 PF05524 PEP-utilising enzyme, N-terminal EYD11_07025 PF00381 PTS HPr component phosphorylation site EYD11_07035 PF00072 Response regulator receiver domain EYD11_07035 PF04397 LytTr DNA-binding domain EYD11_07040 PF07694 5TMR of 5TMR-LYT EYD11_07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_07040 PF06580 Histidine kinase EYD11_07045 PF00155 Aminotransferase class I and II EYD11_07055 PF03279 Bacterial lipid A biosynthesis acyltransferase EYD11_07060 PF10810 Protein of unknown function (DUF2545) EYD11_07070 PF10938 YfdX protein EYD11_07075 PF02515 CoA-transferase family III EYD11_07080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD11_07080 PF00205 Thiamine pyrophosphate enzyme, central domain EYD11_07080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_07085 PF03547 Membrane transport protein EYD11_07090 PF02515 CoA-transferase family III EYD11_07095 PF00072 Response regulator receiver domain EYD11_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_07095 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_07095 PF00512 His Kinase A (phospho-acceptor) domain EYD11_07095 PF01627 Hpt domain EYD11_07100 PF00196 Bacterial regulatory proteins, luxR family EYD11_07100 PF00072 Response regulator receiver domain EYD11_07105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_07105 PF00529 HlyD membrane-fusion protein of T1SS EYD11_07110 PF07690 Major Facilitator Superfamily EYD11_07115 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_07125 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD11_07125 PF00356 Bacterial regulatory proteins, lacI family EYD11_07130 PF00251 Glycosyl hydrolases family 32 N-terminal domain EYD11_07130 PF08244 Glycosyl hydrolases family 32 C terminal EYD11_07135 PF00294 pfkB family carbohydrate kinase EYD11_07140 PF01306 LacY proton/sugar symporter EYD11_07150 PF01226 Formate/nitrite transporter EYD11_07155 PF04333 MlaA lipoprotein EYD11_07165 PF01548 Transposase EYD11_07165 PF02371 Transposase IS116/IS110/IS902 family EYD11_07170 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EYD11_07175 PF04175 Protein of unknown function (DUF406) EYD11_07180 PF02803 Thiolase, C-terminal domain EYD11_07180 PF00108 Thiolase, N-terminal domain EYD11_07185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EYD11_07185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EYD11_07185 PF00378 Enoyl-CoA hydratase/isomerase EYD11_07190 PF00300 Histidine phosphatase superfamily (branch 1) EYD11_07195 PF00419 Fimbrial protein EYD11_07200 PF00577 Outer membrane usher protein EYD11_07200 PF13954 PapC N-terminal domain EYD11_07200 PF13953 PapC C-terminal domain EYD11_07205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_07205 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_07210 PF00419 Fimbrial protein EYD11_07215 PF00419 Fimbrial protein EYD11_07220 PF00419 Fimbrial protein EYD11_07225 PF11245 Protein of unknown function (DUF2544) EYD11_07230 PF01713 Smr domain EYD11_07235 PF05175 Methyltransferase small domain EYD11_07240 PF01264 Chorismate synthase EYD11_07245 PF03411 Penicillin-insensitive murein endopeptidase EYD11_07250 PF01925 Sulfite exporter TauE/SafE EYD11_07255 PF04315 Elongation factor P hydroxylase EYD11_07260 PF08891 YfcL protein EYD11_07265 PF01266 FAD dependent oxidoreductase EYD11_07265 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EYD11_07270 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD11_07270 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD11_07275 PF07690 Major Facilitator Superfamily EYD11_07285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD11_07285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD11_07285 PF11890 Domain of unknown function (DUF3410) EYD11_07290 PF02774 Semialdehyde dehydrogenase, dimerisation domain EYD11_07290 PF01118 Semialdehyde dehydrogenase, NAD binding domain EYD11_07295 PF01416 tRNA pseudouridine synthase EYD11_07300 PF09335 SNARE associated Golgi protein EYD11_07305 PF01039 Carboxyl transferase domain EYD11_07305 PF17848 Acetyl-coA carboxylase zinc finger domain EYD11_07310 PF02875 Mur ligase family, glutamate ligase domain EYD11_07310 PF08245 Mur ligase middle domain EYD11_07315 PF05036 Sporulation related domain EYD11_07320 PF02674 Colicin V production protein EYD11_07325 PF00156 Phosphoribosyl transferase domain EYD11_07330 PF02441 Flavoprotein EYD11_07335 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_07340 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_07345 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_07350 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_07355 PF00005 ABC transporter EYD11_07360 PF04754 Putative transposase, YhgA-like EYD11_07365 PF01370 NAD dependent epimerase/dehydratase family EYD11_07365 PF08338 Domain of unknown function (DUF1731) EYD11_07370 PF02152 Dihydroneopterin aldolase EYD11_07375 PF00043 Glutathione S-transferase, C-terminal domain EYD11_07375 PF02798 Glutathione S-transferase, N-terminal domain EYD11_07380 PF02798 Glutathione S-transferase, N-terminal domain EYD11_07380 PF14834 Glutathione S-transferase, C-terminal domain EYD11_07385 PF12850 Calcineurin-like phosphoesterase superfamily domain EYD11_07390 PF00293 NUDIX domain EYD11_07395 PF03606 C4-dicarboxylate anaerobic carrier EYD11_07400 PF07085 DRTGG domain EYD11_07400 PF01515 Phosphate acetyl/butaryl transferase EYD11_07405 PF00871 Acetokinase family EYD11_07410 PF04217 Protein of unknown function, DUF412 EYD11_07415 PF03887 YfbU domain EYD11_07420 PF13419 Haloacid dehalogenase-like hydrolase EYD11_07425 PF03600 Citrate transporter EYD11_07425 PF02080 TrkA-C domain EYD11_07435 PF00155 Aminotransferase class I and II EYD11_07440 PF03466 LysR substrate binding domain EYD11_07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_07445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EYD11_07450 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYD11_07455 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EYD11_07455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EYD11_07465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EYD11_07465 PF10531 SLBB domain EYD11_07465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EYD11_07470 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EYD11_07470 PF00384 Molybdopterin oxidoreductase EYD11_07470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD11_07470 PF01568 Molydopterin dinucleotide binding domain EYD11_07475 PF00146 NADH dehydrogenase EYD11_07480 PF12838 4Fe-4S dicluster domain EYD11_07485 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EYD11_07490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EYD11_07495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EYD11_07495 PF00361 Proton-conducting membrane transporter EYD11_07500 PF00361 Proton-conducting membrane transporter EYD11_07505 PF00361 Proton-conducting membrane transporter EYD11_07525 PF08974 Domain of unknown function (DUF1877) EYD11_07530 PF04389 Peptidase family M28 EYD11_07535 PF12034 Domain of unknown function (DUF3520) EYD11_07535 PF00092 von Willebrand factor type A domain EYD11_07535 PF12450 von Willebrand factor EYD11_07540 PF02902 Ulp1 protease family, C-terminal catalytic domain EYD11_07545 PF12706 Beta-lactamase superfamily domain EYD11_07550 PF13673 Acetyltransferase (GNAT) domain EYD11_07555 PF05957 Bacterial protein of unknown function (DUF883) EYD11_07560 PF00425 chorismate binding enzyme EYD11_07565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD11_07565 PF16582 Middle domain of thiamine pyrophosphate EYD11_07565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_07570 PF12697 Alpha/beta hydrolase family EYD11_07575 PF00378 Enoyl-CoA hydratase/isomerase EYD11_07580 PF13378 Enolase C-terminal domain-like EYD11_07585 PF13193 AMP-binding enzyme C-terminal domain EYD11_07585 PF00501 AMP-binding enzyme EYD11_07600 PF00892 EamA-like transporter family EYD11_07605 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EYD11_07610 PF01522 Polysaccharide deacetylase EYD11_07615 PF02911 Formyl transferase, C-terminal domain EYD11_07615 PF00551 Formyl transferase EYD11_07615 PF01370 NAD dependent epimerase/dehydratase family EYD11_07620 PF00535 Glycosyl transferase family 2 EYD11_07625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EYD11_07630 PF00300 Histidine phosphatase superfamily (branch 1) EYD11_07635 PF00293 NUDIX domain EYD11_07640 PF07437 YfaZ precursor EYD11_07645 PF00994 Probable molybdopterin binding domain EYD11_07655 PF13378 Enolase C-terminal domain-like EYD11_07655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD11_07660 PF07690 Major Facilitator Superfamily EYD11_07665 PF03328 HpcH/HpaI aldolase/citrate lyase family EYD11_07675 PF04754 Putative transposase, YhgA-like EYD11_07680 PF13183 4Fe-4S dicluster domain EYD11_07680 PF02754 Cysteine-rich domain EYD11_07685 PF00890 FAD binding domain EYD11_07690 PF04324 BFD-like [2Fe-2S] binding domain EYD11_07690 PF01266 FAD dependent oxidoreductase EYD11_07695 PF07690 Major Facilitator Superfamily EYD11_07700 PF03009 Glycerophosphoryl diester phosphodiesterase family EYD11_07715 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_07720 PF00268 Ribonucleotide reductase, small chain EYD11_07725 PF03477 ATP cone domain EYD11_07725 PF02867 Ribonucleotide reductase, barrel domain EYD11_07725 PF00317 Ribonucleotide reductase, all-alpha domain EYD11_07730 PF12951 Passenger-associated-transport-repeat EYD11_07730 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat EYD11_07730 PF03797 Autotransporter beta-domain EYD11_07740 PF03989 DNA gyrase C-terminal domain, beta-propeller EYD11_07740 PF00521 DNA gyrase/topoisomerase IV, subunit A EYD11_07745 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) EYD11_07750 PF06672 Protein of unknown function (DUF1175) EYD11_07755 PF01835 MG2 domain EYD11_07755 PF07703 Alpha-2-macroglobulin bait region domain EYD11_07755 PF00207 Alpha-2-macroglobulin family EYD11_07760 PF08486 Stage II sporulation protein EYD11_07760 PF10062 Predicted secreted protein (DUF2300) EYD11_07765 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) EYD11_07770 PF00108 Thiolase, N-terminal domain EYD11_07770 PF02803 Thiolase, C-terminal domain EYD11_07775 PF02667 Short chain fatty acid transporter EYD11_07780 PF01144 Coenzyme A transferase EYD11_07785 PF01144 Coenzyme A transferase EYD11_07790 PF02954 Bacterial regulatory protein, Fis family EYD11_07790 PF00072 Response regulator receiver domain EYD11_07790 PF00158 Sigma-54 interaction domain EYD11_07795 PF00989 PAS fold EYD11_07795 PF00512 His Kinase A (phospho-acceptor) domain EYD11_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_07800 PF09456 RcsC Alpha-Beta-Loop (ABL) EYD11_07800 PF00512 His Kinase A (phospho-acceptor) domain EYD11_07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_07800 PF00072 Response regulator receiver domain EYD11_07805 PF00196 Bacterial regulatory proteins, luxR family EYD11_07805 PF00072 Response regulator receiver domain EYD11_07810 PF16359 RcsD-ABL domain EYD11_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_07810 PF01627 Hpt domain EYD11_07815 PF00267 Gram-negative porin EYD11_07820 PF02424 ApbE family EYD11_07825 PF02805 Metal binding domain of Ada EYD11_07825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD11_07825 PF12833 Helix-turn-helix domain EYD11_07825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD11_07830 PF13532 2OG-Fe(II) oxygenase superfamily EYD11_07835 PF00005 ABC transporter EYD11_07840 PF06039 Malate:quinone oxidoreductase (Mqo) EYD11_07845 PF03974 Ecotin EYD11_07850 PF00037 4Fe-4S binding domain EYD11_07850 PF12800 4Fe-4S binding domain EYD11_07850 PF13187 4Fe-4S dicluster domain EYD11_07855 PF03927 NapD protein EYD11_07860 PF01568 Molydopterin dinucleotide binding domain EYD11_07860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD11_07860 PF00384 Molybdopterin oxidoreductase EYD11_07865 PF12800 4Fe-4S binding domain EYD11_07865 PF12838 4Fe-4S dicluster domain EYD11_07870 PF12801 4Fe-4S binding domain EYD11_07870 PF13237 4Fe-4S dicluster domain EYD11_07875 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EYD11_07880 PF03264 NapC/NirT cytochrome c family, N-terminal region EYD11_07885 PF00005 ABC transporter EYD11_07890 PF03379 CcmB protein EYD11_07895 PF01578 Cytochrome C assembly protein EYD11_07900 PF04995 Heme exporter protein D (CcmD) EYD11_07905 PF03100 CcmE EYD11_07910 PF01578 Cytochrome C assembly protein EYD11_07910 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EYD11_07915 PF08534 Redoxin EYD11_07920 PF03918 Cytochrome C biogenesis protein EYD11_07925 PF00196 Bacterial regulatory proteins, luxR family EYD11_07925 PF00072 Response regulator receiver domain EYD11_07930 PF16168 Adhesin of bacterial autotransporter system, probable stalk EYD11_07930 PF03797 Autotransporter beta-domain EYD11_07930 PF03212 Pertactin EYD11_07940 PF11893 Domain of unknown function (DUF3413) EYD11_07940 PF00884 Sulfatase EYD11_07945 PF07208 Protein of unknown function (DUF1414) EYD11_07950 PF04245 37-kD nucleoid-associated bacterial protein EYD11_07955 PF01386 Ribosomal L25p family EYD11_07960 PF04851 Type III restriction enzyme, res subunit EYD11_07960 PF00271 Helicase conserved C-terminal domain EYD11_07965 PF01479 S4 domain EYD11_07965 PF00849 RNA pseudouridylate synthase EYD11_07970 PF07690 Major Facilitator Superfamily EYD11_07975 PF13989 YejG-like protein EYD11_07980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_07980 PF00005 ABC transporter EYD11_07985 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_07985 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD11_07990 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_07995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_08000 PF12792 CSS motif domain associated with EAL EYD11_08000 PF00563 EAL domain EYD11_08005 PF00877 NlpC/P60 family EYD11_08010 PF01569 PAP2 superfamily EYD11_08015 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD11_08015 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYD11_08020 PF01232 Mannitol dehydrogenase Rossmann domain EYD11_08020 PF08125 Mannitol dehydrogenase C-terminal domain EYD11_08025 PF08207 Elongation factor P (EF-P) KOW-like domain EYD11_08025 PF09285 Elongation factor P, C-terminal EYD11_08025 PF01132 Elongation factor P (EF-P) OB domain EYD11_08030 PF03692 Putative zinc- or iron-chelating domain EYD11_08035 PF07690 Major Facilitator Superfamily EYD11_08040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_08040 PF00381 PTS HPr component phosphorylation site EYD11_08045 PF00294 pfkB family carbohydrate kinase EYD11_08050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_08050 PF02378 Phosphotransferase system, EIIC EYD11_08055 PF00294 pfkB family carbohydrate kinase EYD11_08060 PF04227 Indigoidine synthase A like protein EYD11_08065 PF01773 Na+ dependent nucleoside transporter N-terminus EYD11_08065 PF07662 Na+ dependent nucleoside transporter C-terminus EYD11_08070 PF00027 Cyclic nucleotide-binding domain EYD11_08075 PF01156 Inosine-uridine preferring nucleoside hydrolase EYD11_08080 PF07662 Na+ dependent nucleoside transporter C-terminus EYD11_08080 PF01773 Na+ dependent nucleoside transporter N-terminus EYD11_08085 PF00294 pfkB family carbohydrate kinase EYD11_08090 PF01261 Xylose isomerase-like TIM barrel EYD11_08095 PF03601 Conserved hypothetical protein 698 EYD11_08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_08100 PF03466 LysR substrate binding domain EYD11_08105 PF00324 Amino acid permease EYD11_08120 PF00756 Putative esterase EYD11_08125 PF01227 GTP cyclohydrolase I EYD11_08130 PF04235 Protein of unknown function (DUF418) EYD11_08135 PF00356 Bacterial regulatory proteins, lacI family EYD11_08140 PF13407 Periplasmic binding protein domain EYD11_08145 PF00005 ABC transporter EYD11_08150 PF02653 Branched-chain amino acid transport system / permease component EYD11_08155 PF01180 Dihydroorotate dehydrogenase EYD11_08160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EYD11_08160 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_08165 PF10808 Protein of unknown function (DUF2542) EYD11_08170 PF02698 DUF218 domain EYD11_08175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EYD11_08175 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region EYD11_08180 PF04172 LrgB-like family EYD11_08185 PF03788 LrgA family EYD11_08190 PF01207 Dihydrouridine synthase (Dus) EYD11_08200 PF02321 Outer membrane efflux protein EYD11_08210 PF09335 SNARE associated Golgi protein EYD11_08215 PF04893 Yip1 domain EYD11_08220 PF00768 D-alanyl-D-alanine carboxypeptidase EYD11_08225 PF09330 D-lactate dehydrogenase, membrane binding EYD11_08225 PF01565 FAD binding domain EYD11_08230 PF00933 Glycosyl hydrolase family 3 N terminal domain EYD11_08230 PF01915 Glycosyl hydrolase family 3 C-terminal domain EYD11_08230 PF14310 Fibronectin type III-like domain EYD11_08235 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EYD11_08240 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_08245 PF00005 ABC transporter EYD11_08250 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_08260 PF13411 MerR HTH family regulatory protein EYD11_08265 PF06580 Histidine kinase EYD11_08265 PF07694 5TMR of 5TMR-LYT EYD11_08270 PF00072 Response regulator receiver domain EYD11_08270 PF04397 LytTr DNA-binding domain EYD11_08275 PF07308 Protein of unknown function (DUF1456) EYD11_08280 PF06998 Protein of unknown function (DUF1307) EYD11_08285 PF04434 SWIM zinc finger EYD11_08290 PF05762 VWA domain containing CoxE-like protein EYD11_08310 PF13569 Domain of unknown function (DUF4132) EYD11_08315 PF13569 Domain of unknown function (DUF4132) EYD11_08320 PF13569 Domain of unknown function (DUF4132) EYD11_08325 PF09334 tRNA synthetases class I (M) EYD11_08325 PF01588 Putative tRNA binding domain EYD11_08330 PF10609 NUBPL iron-transfer P-loop NTPase EYD11_08335 PF10836 Protein of unknown function (DUF2574) EYD11_08340 PF00419 Fimbrial protein EYD11_08345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_08345 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_08350 PF13954 PapC N-terminal domain EYD11_08350 PF13953 PapC C-terminal domain EYD11_08350 PF00577 Outer membrane usher protein EYD11_08355 PF00419 Fimbrial protein EYD11_08360 PF11776 Nickel/cobalt transporter regulator EYD11_08365 PF03824 High-affinity nickel-transport protein EYD11_08370 PF02583 Metal-sensitive transcriptional repressor EYD11_08375 PF02110 Hydroxyethylthiazole kinase family EYD11_08380 PF08543 Phosphomethylpyrimidine kinase EYD11_08385 PF01183 Glycosyl hydrolases family 25 EYD11_08390 PF00392 Bacterial regulatory proteins, gntR family EYD11_08390 PF07702 UTRA domain EYD11_08395 PF00294 pfkB family carbohydrate kinase EYD11_08400 PF03747 ADP-ribosylglycohydrolase EYD11_08405 PF03825 Nucleoside H+ symporter EYD11_08410 PF01791 DeoC/LacD family aldolase EYD11_08415 PF01116 Fructose-bisphosphate aldolase class-II EYD11_08420 PF08013 Tagatose 6 phosphate kinase EYD11_08425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_08430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_08435 PF03611 PTS system sugar-specific permease component EYD11_08440 PF00107 Zinc-binding dehydrogenase EYD11_08440 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_08445 PF08220 DeoR-like helix-turn-helix domain EYD11_08450 PF00781 Diacylglycerol kinase catalytic domain EYD11_08465 PF07411 Domain of unknown function (DUF1508) EYD11_08470 PF00486 Transcriptional regulatory protein, C terminal EYD11_08470 PF00072 Response regulator receiver domain EYD11_08475 PF00512 His Kinase A (phospho-acceptor) domain EYD11_08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_08475 PF00672 HAMP domain EYD11_08480 PF07690 Major Facilitator Superfamily EYD11_08485 PF00873 AcrB/AcrD/AcrF family EYD11_08490 PF00873 AcrB/AcrD/AcrF family EYD11_08495 PF13533 Biotin-lipoyl like EYD11_08515 PF00092 von Willebrand factor type A domain EYD11_08530 PF00012 Hsp70 protein EYD11_08535 PF06029 AlkA N-terminal domain EYD11_08535 PF00730 HhH-GPD superfamily base excision DNA repair protein EYD11_08545 PF02371 Transposase IS116/IS110/IS902 family EYD11_08545 PF01548 Transposase EYD11_08555 PF00485 Phosphoribulokinase / Uridine kinase family EYD11_08560 PF00692 dUTPase EYD11_08565 PF05170 AsmA family EYD11_08570 PF00571 CBS domain EYD11_08570 PF03741 Integral membrane protein TerC family EYD11_08570 PF03471 Transporter associated domain EYD11_08580 PF00483 Nucleotidyl transferase EYD11_08590 PF13936 Helix-turn-helix domain EYD11_08590 PF00665 Integrase core domain EYD11_08595 PF01527 Transposase EYD11_08605 PF14052 Capsule assembly protein Wzi EYD11_08610 PF02563 Polysaccharide biosynthesis/export protein EYD11_08610 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EYD11_08610 PF10531 SLBB domain EYD11_08615 PF01451 Low molecular weight phosphotyrosine protein phosphatase EYD11_08620 PF02706 Chain length determinant protein EYD11_08620 PF13614 AAA domain EYD11_08620 PF13807 G-rich domain on putative tyrosine kinase EYD11_08630 PF04230 Polysaccharide pyruvyl transferase EYD11_08640 PF00534 Glycosyl transferases group 1 EYD11_08640 PF13439 Glycosyltransferase Family 4 EYD11_08665 PF08548 Peptidase M10 serralysin C terminal EYD11_08665 PF12708 Pectate lyase superfamily protein EYD11_08665 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) EYD11_08675 PF02397 Bacterial sugar transferase EYD11_08680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD11_08680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EYD11_08685 PF00483 Nucleotidyl transferase EYD11_08685 PF01050 Mannose-6-phosphate isomerase EYD11_08690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYD11_08690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYD11_08690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYD11_08690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYD11_08695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EYD11_08695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EYD11_08695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EYD11_08710 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EYD11_08710 PF01502 Phosphoribosyl-AMP cyclohydrolase EYD11_08715 PF00977 Histidine biosynthesis protein EYD11_08720 PF00977 Histidine biosynthesis protein EYD11_08725 PF00117 Glutamine amidotransferase class-I EYD11_08730 PF00475 Imidazoleglycerol-phosphate dehydratase EYD11_08730 PF08645 Polynucleotide kinase 3 phosphatase EYD11_08735 PF00155 Aminotransferase class I and II EYD11_08740 PF00815 Histidinol dehydrogenase EYD11_08745 PF01634 ATP phosphoribosyltransferase EYD11_08745 PF08029 HisG, C-terminal domain EYD11_08755 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EYD11_08760 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EYD11_08765 PF01370 NAD dependent epimerase/dehydratase family EYD11_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_08770 PF03466 LysR substrate binding domain EYD11_08780 PF13520 Amino acid permease EYD11_08785 PF04143 Sulphur transport EYD11_08790 PF01206 Sulfurtransferase TusA EYD11_08795 PF00929 Exonuclease EYD11_08795 PF08411 Exonuclease C-terminal EYD11_08800 PF07943 Penicillin-binding protein 5, C-terminal domain EYD11_08800 PF00768 D-alanyl-D-alanine carboxypeptidase EYD11_08805 PF13542 Helix-turn-helix domain of transposase family ISL3 EYD11_08805 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 EYD11_08805 PF01610 Transposase EYD11_08810 PF06445 GyrI-like small molecule binding domain EYD11_08815 PF04632 Fusaric acid resistance protein family EYD11_08820 PF04363 Protein of unknown function (DUF496) EYD11_08825 PF10662 Ethanolamine utilisation - propanediol utilisation EYD11_08835 PF01548 Transposase EYD11_08835 PF02371 Transposase IS116/IS110/IS902 family EYD11_08845 PF05717 IS66 Orf2 like protein EYD11_08850 PF03050 Transposase IS66 family EYD11_08850 PF13007 Transposase C of IS166 homeodomain EYD11_08850 PF13817 IS66 C-terminal element EYD11_08850 PF13005 zinc-finger binding domain of transposase IS66 EYD11_08865 PF06755 CbtA_toxin of type IV toxin-antitoxin system EYD11_08870 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A EYD11_08875 PF06174 Protein of unknown function (DUF987) EYD11_08880 PF04002 RadC-like JAB domain EYD11_08885 PF03230 Antirestriction protein EYD11_08895 PF06067 Domain of unknown function (DUF932) EYD11_08905 PF06006 Bacterial protein of unknown function (DUF905) EYD11_08910 PF03797 Autotransporter beta-domain EYD11_08910 PF13018 Extended Signal Peptide of Type V secretion system EYD11_08910 PF16168 Adhesin of bacterial autotransporter system, probable stalk EYD11_08915 PF00665 Integrase core domain EYD11_08920 PF01695 IstB-like ATP binding protein EYD11_08975 PF05321 Haemolysin expression modulating protein EYD11_09015 PF00665 Integrase core domain EYD11_09015 PF13936 Helix-turn-helix domain EYD11_09020 PF01527 Transposase EYD11_09035 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EYD11_09040 PF02654 Cobalamin-5-phosphate synthase EYD11_09045 PF02277 Phosphoribosyltransferase EYD11_09050 PF17969 L,D-transpeptidase C-terminal domain EYD11_09050 PF03734 L,D-transpeptidase catalytic domain EYD11_09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_09060 PF03466 LysR substrate binding domain EYD11_09065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_09065 PF03466 LysR substrate binding domain EYD11_09090 PF01709 Transcriptional regulator EYD11_09095 PF01048 Phosphorylase superfamily EYD11_09095 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus EYD11_09100 PF00083 Sugar (and other) transporter EYD11_09100 PF07690 Major Facilitator Superfamily EYD11_09110 PF02369 Bacterial Ig-like domain (group 1) EYD11_09110 PF11924 Inverse autotransporter, beta-domain EYD11_09110 PF09134 Invasin, domain 3 EYD11_09120 PF06167 Glucose-regulated metallo-peptidase M90 EYD11_09130 PF01292 Prokaryotic cytochrome b561 EYD11_09135 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EYD11_09140 PF01794 Ferric reductase like transmembrane component EYD11_09145 PF00174 Oxidoreductase molybdopterin binding domain EYD11_09150 PF00576 HIUase/Transthyretin family EYD11_09155 PF00072 Response regulator receiver domain EYD11_09155 PF00486 Transcriptional regulatory protein, C terminal EYD11_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_09160 PF00512 His Kinase A (phospho-acceptor) domain EYD11_09175 PF00267 Gram-negative porin EYD11_09185 PF01966 HD domain EYD11_09190 PF18284 DNA methylase N-terminal domain EYD11_09190 PF00145 C-5 cytosine-specific DNA methylase EYD11_09195 PF03852 DNA mismatch endonuclease Vsr EYD11_09200 PF00892 EamA-like transporter family EYD11_09205 PF05661 Protein of unknown function (DUF808) EYD11_09210 PF09926 Uncharacterized small protein (DUF2158) EYD11_09225 PF10733 Protein of unknown function (DUF2525) EYD11_09235 PF10781 Dextransucrase DSRB EYD11_09240 PF00196 Bacterial regulatory proteins, luxR family EYD11_09245 PF01311 Bacterial export proteins, family 1 EYD11_09250 PF01313 Bacterial export proteins, family 3 EYD11_09255 PF00813 FliP family EYD11_09260 PF04347 Flagellar biosynthesis protein, FliO EYD11_09265 PF16973 Flagellar motor switch protein FliN N-terminal EYD11_09265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYD11_09270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYD11_09270 PF02154 Flagellar motor switch protein FliM EYD11_09275 PF03748 Flagellar basal body-associated protein FliL EYD11_09280 PF02120 Flagellar hook-length control protein FliK EYD11_09285 PF02050 Flagellar FliJ protein EYD11_09295 PF02108 Flagellar assembly protein FliH EYD11_09300 PF01706 FliG C-terminal domain EYD11_09300 PF14842 FliG N-terminal domain EYD11_09300 PF14841 FliG middle domain EYD11_09305 PF08345 Flagellar M-ring protein C-terminal EYD11_09305 PF01514 Secretory protein of YscJ/FliF family EYD11_09310 PF02049 Flagellar hook-basal body complex protein FliE EYD11_09320 PF17607 Family of unknown function (DUF5503) EYD11_09330 PF02586 SOS response associated peptidase (SRAP) EYD11_09335 PF01206 Sulfurtransferase TusA EYD11_09340 PF04143 Sulphur transport EYD11_09345 PF13987 YedD-like protein EYD11_09350 PF02806 Alpha amylase, C-terminal all-beta domain EYD11_09350 PF00128 Alpha amylase, catalytic domain EYD11_09355 PF05400 Flagellar protein FliT EYD11_09360 PF02561 Flagellar protein FliS EYD11_09365 PF02465 Flagellar hook-associated protein 2 N-terminus EYD11_09365 PF07195 Flagellar hook-associated protein 2 C-terminus EYD11_09370 PF00700 Bacterial flagellin C-terminal helical region EYD11_09370 PF00669 Bacterial flagellin N-terminal helical region EYD11_09370 PF12445 Flagellin protein EYD11_09375 PF04542 Sigma-70 region 2 EYD11_09375 PF04539 Sigma-70 region 3 EYD11_09375 PF04545 Sigma-70, region 4 EYD11_09380 PF02899 Phage integrase, N-terminal SAM-like domain EYD11_09390 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_09405 PF03472 Autoinducer binding domain EYD11_09405 PF00196 Bacterial regulatory proteins, luxR family EYD11_09410 PF10769 Protein of unknown function (DUF2594) EYD11_09425 PF00072 Response regulator receiver domain EYD11_09425 PF00196 Bacterial regulatory proteins, luxR family EYD11_09430 PF02151 UvrB/uvrC motif EYD11_09430 PF08459 UvrC Helix-hairpin-helix N-terminal EYD11_09430 PF01541 GIY-YIG catalytic domain EYD11_09435 PF01066 CDP-alcohol phosphatidyltransferase EYD11_09455 PF03695 Uncharacterised protein family (UPF0149) EYD11_09455 PF02810 SEC-C motif EYD11_09460 PF03222 Tryptophan/tyrosine permease family EYD11_09465 PF10678 Protein of unknown function (DUF2492) EYD11_09470 PF00210 Ferritin-like domain EYD11_09475 PF13992 YecR-like lipoprotein EYD11_09485 PF10964 Protein of unknown function (DUF2766) EYD11_09490 PF00210 Ferritin-like domain EYD11_09495 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD11_09500 PF00005 ABC transporter EYD11_09505 PF02653 Branched-chain amino acid transport system / permease component EYD11_09510 PF02358 Trehalose-phosphatase EYD11_09515 PF00982 Glycosyltransferase family 20 EYD11_09520 PF00582 Universal stress protein family EYD11_09525 PF05247 Flagellar transcriptional activator (FlhD) EYD11_09530 PF05280 Flagellar transcriptional activator (FlhC) EYD11_09535 PF01618 MotA/TolQ/ExbB proton channel family EYD11_09540 PF13677 Membrane MotB of proton-channel complex MotA/MotB EYD11_09540 PF00691 OmpA family EYD11_09545 PF01584 CheW-like domain EYD11_09545 PF09078 CheY binding EYD11_09545 PF02895 Signal transducing histidine kinase, homodimeric domain EYD11_09545 PF01627 Hpt domain EYD11_09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_09550 PF01584 CheW-like domain EYD11_09555 PF02203 Tar ligand binding domain homologue EYD11_09555 PF00672 HAMP domain EYD11_09555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD11_09560 PF02203 Tar ligand binding domain homologue EYD11_09560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD11_09560 PF00672 HAMP domain EYD11_09565 PF01739 CheR methyltransferase, SAM binding domain EYD11_09565 PF03705 CheR methyltransferase, all-alpha domain EYD11_09570 PF00072 Response regulator receiver domain EYD11_09570 PF01339 CheB methylesterase EYD11_09575 PF00072 Response regulator receiver domain EYD11_09580 PF04344 Chemotaxis phosphatase, CheZ EYD11_09585 PF01312 FlhB HrpN YscU SpaS Family EYD11_09590 PF00771 FHIPEP family EYD11_09595 PF06366 Flagellar protein FlhE EYD11_09600 PF07007 Lysozyme inhibitor LprI EYD11_09605 PF00750 tRNA synthetases class I (R) EYD11_09605 PF03485 Arginyl tRNA synthetase N terminal domain EYD11_09605 PF05746 DALR anticodon binding domain EYD11_09610 PF06185 YecM protein EYD11_09615 PF03932 CutC family EYD11_09620 PF03264 NapC/NirT cytochrome c family, N-terminal region EYD11_09625 PF00384 Molybdopterin oxidoreductase EYD11_09625 PF01568 Molydopterin dinucleotide binding domain EYD11_09625 PF18364 Molybdopterin oxidoreductase N-terminal domain EYD11_09630 PF08003 Protein of unknown function (DUF1698) EYD11_09635 PF13649 Methyltransferase domain EYD11_09640 PF01124 MAPEG family EYD11_09645 PF01904 Protein of unknown function DUF72 EYD11_09650 PF00857 Isochorismatase family EYD11_09655 PF00152 tRNA synthetases class II (D, K and N) EYD11_09655 PF01336 OB-fold nucleic acid binding domain EYD11_09655 PF02938 GAD domain EYD11_09660 PF00293 NUDIX domain EYD11_09665 PF01709 Transcriptional regulator EYD11_09670 PF02075 Crossover junction endodeoxyribonuclease RuvC EYD11_09675 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family EYD11_09685 PF07499 RuvA, C-terminal domain EYD11_09685 PF01330 RuvA N terminal domain EYD11_09690 PF17864 RuvB AAA lid domain EYD11_09690 PF05491 RuvB C-terminal winged helix domain EYD11_09690 PF05496 Holliday junction DNA helicase RuvB P-loop domain EYD11_09695 PF00950 ABC 3 transport family EYD11_09700 PF00005 ABC transporter EYD11_09705 PF01297 Zinc-uptake complex component A periplasmic EYD11_09710 PF01476 LysM domain EYD11_09710 PF08525 Opacity-associated protein A N-terminal motif EYD11_09710 PF01551 Peptidase family M23 EYD11_09715 PF03279 Bacterial lipid A biosynthesis acyltransferase EYD11_09720 PF00224 Pyruvate kinase, barrel domain EYD11_09720 PF02887 Pyruvate kinase, alpha/beta domain EYD11_09725 PF01380 SIS domain EYD11_09725 PF01418 Helix-turn-helix domain, rpiR family EYD11_09730 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EYD11_09730 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EYD11_09735 PF00920 Dehydratase family EYD11_09740 PF01081 KDPG and KHG aldolase EYD11_09745 PF02222 ATP-grasp domain EYD11_09750 PF07130 YebG protein EYD11_09755 PF13995 YebF-like protein EYD11_09760 PF04391 Protein of unknown function (DUF533) EYD11_09765 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EYD11_09765 PF00326 Prolyl oligopeptidase family EYD11_09770 PF00929 Exonuclease EYD11_09775 PF00795 Carbon-nitrogen hydrolase EYD11_09780 PF06440 DNA polymerase III, theta subunit EYD11_09785 PF04234 CopC domain EYD11_09790 PF05425 Copper resistance protein D EYD11_09795 PF10709 Protein of unknown function (DUF2511) EYD11_09800 PF00149 Calcineurin-like phosphoesterase EYD11_09805 PF07358 Protein of unknown function (DUF1482) EYD11_09810 PF07351 Protein of unknown function (DUF1480) EYD11_09815 PF01189 16S rRNA methyltransferase RsmB/F EYD11_09815 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EYD11_09815 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF EYD11_09820 PF02470 MlaD protein EYD11_09825 PF04403 Paraquat-inducible protein A EYD11_09830 PF13185 GAF domain EYD11_09835 PF17516 ProQ C-terminal domain EYD11_09835 PF04352 ProQ/FINO family EYD11_09840 PF17804 Tail specific protease N-terminal domain EYD11_09840 PF11818 C-terminal domain of tail specific protease (DUF3340) EYD11_09840 PF03572 Peptidase family S41 EYD11_09840 PF00595 PDZ domain EYD11_09845 PF01435 Peptidase family M48 EYD11_09850 PF07690 Major Facilitator Superfamily EYD11_09855 PF09339 IclR helix-turn-helix domain EYD11_09855 PF01614 Bacterial transcriptional regulator EYD11_09860 PF13996 YobH-like protein EYD11_09865 PF13998 MgrB protein EYD11_09870 PF13974 YebO-like protein EYD11_09875 PF10736 Protein of unknown function (DUF2627) EYD11_09880 PF00313 'Cold-shock' DNA-binding domain EYD11_09885 PF13847 Methyltransferase domain EYD11_09890 PF02659 Putative manganese efflux pump EYD11_09895 PF06173 Protein of unknown function (DUF986) EYD11_09900 PF03613 PTS system mannose/fructose/sorbose family IID component EYD11_09905 PF03609 PTS system sorbose-specific iic component EYD11_09910 PF03830 PTS system sorbose subfamily IIB component EYD11_09910 PF03610 PTS system fructose IIA component EYD11_09915 PF03741 Integral membrane protein TerC family EYD11_09915 PF03471 Transporter associated domain EYD11_09920 PF00563 EAL domain EYD11_09920 PF12792 CSS motif domain associated with EAL EYD11_09925 PF03313 Serine dehydratase alpha chain EYD11_09925 PF03315 Serine dehydratase beta chain EYD11_09930 PF00293 NUDIX domain EYD11_09935 PF00425 chorismate binding enzyme EYD11_09935 PF04715 Anthranilate synthase component I, N terminal region EYD11_09940 PF03701 Uncharacterised protein family (UPF0181) EYD11_09945 PF08986 Domain of unknown function (DUF1889) EYD11_09950 PF01042 Endoribonuclease L-PSP EYD11_09955 PF13307 Helicase C-terminal domain EYD11_09955 PF04851 Type III restriction enzyme, res subunit EYD11_09960 PF00814 Glycoprotease family EYD11_09965 PF03843 Outer membrane lipoprotein Slp family EYD11_09970 PF00501 AMP-binding enzyme EYD11_09970 PF13193 AMP-binding enzyme C-terminal domain EYD11_09975 PF00570 HRDC domain EYD11_09975 PF01612 3'-5' exonuclease EYD11_09980 PF00175 Oxidoreductase NAD-binding domain EYD11_09980 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_09980 PF00970 Oxidoreductase FAD-binding domain EYD11_09985 PF00355 Rieske [2Fe-2S] domain EYD11_09985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EYD11_09990 PF02028 BCCT, betaine/carnitine/choline family transporter EYD11_09995 PF00180 Isocitrate/isopropylmalate dehydrogenase EYD11_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_10000 PF03466 LysR substrate binding domain EYD11_10005 PF01810 LysE type translocator EYD11_10010 PF09313 Domain of unknown function (DUF1971) EYD11_10015 PF08956 Domain of unknown function (DUF1869) EYD11_10020 PF04226 Transglycosylase associated protein EYD11_10035 PF00990 Diguanylate cyclase, GGDEF domain EYD11_10035 PF13185 GAF domain EYD11_10040 PF03891 Domain of unknown function (DUF333) EYD11_10045 PF04343 Protein of unknown function, DUF488 EYD11_10050 PF07690 Major Facilitator Superfamily EYD11_10055 PF02311 AraC-like ligand binding domain EYD11_10055 PF12833 Helix-turn-helix domain EYD11_10060 PF04284 Protein of unknown function (DUF441) EYD11_10070 PF04073 Aminoacyl-tRNA editing domain EYD11_10075 PF00990 Diguanylate cyclase, GGDEF domain EYD11_10075 PF17155 Gammaproteobacterial periplasmic sensor domain EYD11_10080 PF00990 Diguanylate cyclase, GGDEF domain EYD11_10080 PF17158 Membrane-associated sensor, integral membrane domain EYD11_10085 PF04285 Protein of unknown function (DUF444) EYD11_10090 PF06798 PrkA serine protein kinase C-terminal domain EYD11_10090 PF08298 PrkA AAA domain EYD11_10095 PF06629 MltA-interacting protein MipA EYD11_10100 PF00248 Aldo/keto reductase family EYD11_10105 PF01263 Aldose 1-epimerase EYD11_10110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EYD11_10110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EYD11_10115 PF01641 SelR domain EYD11_10120 PF07023 Protein of unknown function (DUF1315) EYD11_10125 PF00107 Zinc-binding dehydrogenase EYD11_10125 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_10130 PF00083 Sugar (and other) transporter EYD11_10135 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_10135 PF00107 Zinc-binding dehydrogenase EYD11_10140 PF01116 Fructose-bisphosphate aldolase class-II EYD11_10145 PF00294 pfkB family carbohydrate kinase EYD11_10150 PF00248 Aldo/keto reductase family EYD11_10155 PF00455 DeoR C terminal sensor domain EYD11_10155 PF08220 DeoR-like helix-turn-helix domain EYD11_10160 PF00083 Sugar (and other) transporter EYD11_10165 PF00857 Isochorismatase family EYD11_10170 PF00710 Asparaginase, N-terminal EYD11_10170 PF17763 Glutaminase/Asparaginase C-terminal domain EYD11_10175 PF01343 Peptidase family S49 EYD11_10180 PF00881 Nitroreductase family EYD11_10185 PF02769 AIR synthase related protein, C-terminal domain EYD11_10185 PF00586 AIR synthase related protein, N-terminal domain EYD11_10190 PF01131 DNA topoisomerase EYD11_10190 PF01751 Toprim domain EYD11_10195 PF06889 Protein of unknown function (DUF1266) EYD11_10200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EYD11_10200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EYD11_10205 PF07383 Protein of unknown function (DUF1496) EYD11_10210 PF00293 NUDIX domain EYD11_10215 PF01066 CDP-alcohol phosphatidyltransferase EYD11_10220 PF00581 Rhodanese-like domain EYD11_10225 PF00005 ABC transporter EYD11_10230 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_10235 PF13416 Bacterial extracellular solute-binding protein EYD11_10240 PF02627 Carboxymuconolactone decarboxylase family EYD11_10245 PF09335 SNARE associated Golgi protein EYD11_10255 PF09335 SNARE associated Golgi protein EYD11_10260 PF03372 Endonuclease/Exonuclease/phosphatase family EYD11_10265 PF00202 Aminotransferase class-III EYD11_10270 PF04958 Arginine N-succinyltransferase beta subunit EYD11_10275 PF00171 Aldehyde dehydrogenase family EYD11_10280 PF04996 Succinylarginine dihydrolase EYD11_10285 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EYD11_10290 PF07813 LTXXQ motif family protein EYD11_10295 PF05962 HutD EYD11_10305 PF02540 NAD synthase EYD11_10310 PF04355 SmpA / OmlA family EYD11_10320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_10325 PF02378 Phosphotransferase system, EIIC EYD11_10330 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EYD11_10335 PF12833 Helix-turn-helix domain EYD11_10335 PF07883 Cupin domain EYD11_10340 PF02056 Family 4 glycosyl hydrolase EYD11_10340 PF11975 Family 4 glycosyl hydrolase C-terminal domain EYD11_10345 PF04794 YdjC-like protein EYD11_10350 PF18011 C-terminal domain found in long catalases EYD11_10350 PF06628 Catalase-related immune-responsive EYD11_10350 PF00199 Catalase EYD11_10355 PF10729 Cell division activator CedA EYD11_10370 PF04307 LexA-binding, inner membrane-associated putative hydrolase EYD11_10375 PF13419 Haloacid dehalogenase-like hydrolase EYD11_10380 PF14002 YniB-like protein EYD11_10390 PF11080 Endoribonuclease GhoS EYD11_10395 PF00294 pfkB family carbohydrate kinase EYD11_10400 PF04338 Protein of unknown function, DUF481 EYD11_10415 PF03129 Anticodon binding domain EYD11_10415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYD11_10415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EYD11_10415 PF02824 TGS domain EYD11_10420 PF05198 Translation initiation factor IF-3, N-terminal domain EYD11_10420 PF00707 Translation initiation factor IF-3, C-terminal domain EYD11_10425 PF01632 Ribosomal protein L35 EYD11_10430 PF00453 Ribosomal protein L20 EYD11_10440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EYD11_10440 PF01409 tRNA synthetases class II core domain (F) EYD11_10445 PF01588 Putative tRNA binding domain EYD11_10445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EYD11_10445 PF03483 B3/4 domain EYD11_10445 PF03484 tRNA synthetase B5 domain EYD11_10445 PF03147 Ferredoxin-fold anticodon binding domain EYD11_10450 PF00216 Bacterial DNA-binding protein EYD11_10455 PF01032 FecCD transport family EYD11_10460 PF00255 Glutathione peroxidase EYD11_10465 PF00005 ABC transporter EYD11_10470 PF00877 NlpC/P60 family EYD11_10475 PF00563 EAL domain EYD11_10480 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EYD11_10485 PF10636 Hemin uptake protein hemP EYD11_10490 PF00793 DAHP synthetase I family EYD11_10495 PF03618 Kinase/pyrophosphorylase EYD11_10500 PF00391 PEP-utilising enzyme, mobile domain EYD11_10500 PF02896 PEP-utilising enzyme, TIM barrel domain EYD11_10500 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EYD11_10505 PF00501 AMP-binding enzyme EYD11_10505 PF13193 AMP-binding enzyme C-terminal domain EYD11_10515 PF01494 FAD binding domain EYD11_10520 PF00766 Electron transfer flavoprotein FAD-binding domain EYD11_10520 PF01012 Electron transfer flavoprotein domain EYD11_10525 PF01012 Electron transfer flavoprotein domain EYD11_10530 PF12833 Helix-turn-helix domain EYD11_10530 PF02311 AraC-like ligand binding domain EYD11_10535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD11_10535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD11_10535 PF02770 Acyl-CoA dehydrogenase, middle domain EYD11_10540 PF01144 Coenzyme A transferase EYD11_10545 PF01487 Type I 3-dehydroquinase EYD11_10550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EYD11_10550 PF08501 Shikimate dehydrogenase substrate binding domain EYD11_10555 PF07690 Major Facilitator Superfamily EYD11_10560 PF07690 Major Facilitator Superfamily EYD11_10565 PF08965 Domain of unknown function (DUF1870) EYD11_10575 PF01594 AI-2E family transporter EYD11_10580 PF01565 FAD binding domain EYD11_10580 PF02913 FAD linked oxidases, C-terminal domain EYD11_10580 PF13183 4Fe-4S dicluster domain EYD11_10585 PF03061 Thioesterase superfamily EYD11_10590 PF15930 Domain of unknown function EYD11_10595 PF01521 Iron-sulphur cluster biosynthesis EYD11_10600 PF01458 Uncharacterized protein family (UPF0051) EYD11_10605 PF00005 ABC transporter EYD11_10610 PF01458 Uncharacterized protein family (UPF0051) EYD11_10615 PF00266 Aminotransferase class-V EYD11_10620 PF02657 Fe-S metabolism associated domain EYD11_10625 PF01476 LysM domain EYD11_10625 PF17969 L,D-transpeptidase C-terminal domain EYD11_10625 PF03734 L,D-transpeptidase catalytic domain EYD11_10630 PF04728 Lipoprotein leucine-zipper EYD11_10635 PF00224 Pyruvate kinase, barrel domain EYD11_10635 PF02887 Pyruvate kinase, alpha/beta domain EYD11_10640 PF10965 Protein of unknown function (DUF2767) EYD11_10645 PF13247 4Fe-4S dicluster domain EYD11_10645 PF12800 4Fe-4S binding domain EYD11_10650 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 EYD11_10650 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain EYD11_10660 PF13247 4Fe-4S dicluster domain EYD11_10665 PF01292 Prokaryotic cytochrome b561 EYD11_10675 PF13454 FAD-NAD(P)-binding EYD11_10680 PF08803 Putative mono-oxygenase ydhR EYD11_10695 PF03212 Pertactin EYD11_10695 PF16168 Adhesin of bacterial autotransporter system, probable stalk EYD11_10700 PF01554 MatE EYD11_10705 PF00677 Lumazine binding domain EYD11_10715 PF07690 Major Facilitator Superfamily EYD11_10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_10720 PF03466 LysR substrate binding domain EYD11_10725 PF00356 Bacterial regulatory proteins, lacI family EYD11_10735 PF07690 Major Facilitator Superfamily EYD11_10740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EYD11_10740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EYD11_10745 PF00877 NlpC/P60 family EYD11_10750 PF00462 Glutaredoxin EYD11_10755 PF00271 Helicase conserved C-terminal domain EYD11_10755 PF00270 DEAD/DEAH box helicase EYD11_10755 PF08494 DEAD/H associated EYD11_10760 PF00929 Exonuclease EYD11_10765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD11_10770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EYD11_10775 PF00440 Bacterial regulatory proteins, tetR family EYD11_10775 PF16925 Tetracyclin repressor-like, C-terminal domain EYD11_10780 PF06945 Protein of unknown function (DUF1289) EYD11_10785 PF00248 Aldo/keto reductase family EYD11_10790 PF00080 Copper/zinc superoxide dismutase (SODC) EYD11_10795 PF04632 Fusaric acid resistance protein family EYD11_10800 PF00529 HlyD membrane-fusion protein of T1SS EYD11_10800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_10805 PF07869 Protein of unknown function (DUF1656) EYD11_10810 PF01047 MarR family EYD11_10815 PF05433 Glycine zipper 2TM domain EYD11_10820 PF03702 Anhydro-N-acetylmuramic acid kinase EYD11_10825 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme EYD11_10830 PF01243 Pyridoxamine 5'-phosphate oxidase EYD11_10830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EYD11_10835 PF00579 tRNA synthetases class I (W and Y) EYD11_10835 PF01479 S4 domain EYD11_10840 PF08543 Phosphomethylpyrimidine kinase EYD11_10845 PF00043 Glutathione S-transferase, C-terminal domain EYD11_10845 PF02798 Glutathione S-transferase, N-terminal domain EYD11_10850 PF00854 POT family EYD11_10855 PF00633 Helix-hairpin-helix motif EYD11_10855 PF00730 HhH-GPD superfamily base excision DNA repair protein EYD11_10855 PF10576 Iron-sulfur binding domain of endonuclease III EYD11_10860 PF02508 Rnf-Nqr subunit, membrane protein EYD11_10865 PF04205 FMN-binding domain EYD11_10870 PF03116 NQR2, RnfD, RnfE family EYD11_10875 PF13375 RnfC Barrel sandwich hybrid domain EYD11_10875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EYD11_10875 PF10531 SLBB domain EYD11_10875 PF12838 4Fe-4S dicluster domain EYD11_10880 PF04060 Putative Fe-S cluster EYD11_10885 PF02508 Rnf-Nqr subunit, membrane protein EYD11_10890 PF10754 Protein of unknown function (DUF2569) EYD11_10895 PF05321 Haemolysin expression modulating protein EYD11_10905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD11_10905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD11_10910 PF00962 Adenosine/AMP deaminase EYD11_10915 PF00155 Aminotransferase class I and II EYD11_10920 PF02378 Phosphotransferase system, EIIC EYD11_10920 PF00367 phosphotransferase system, EIIB EYD11_10925 PF00356 Bacterial regulatory proteins, lacI family EYD11_10925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD11_10935 PF00440 Bacterial regulatory proteins, tetR family EYD11_10940 PF02837 Glycosyl hydrolases family 2, sugar binding domain EYD11_10940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EYD11_10940 PF00703 Glycosyl hydrolases family 2 EYD11_10950 PF03573 outer membrane porin, OprD family EYD11_10955 PF06097 Bacterial protein of unknown function (DUF945) EYD11_10960 PF01238 Phosphomannose isomerase type I EYD11_10965 PF05683 Fumarase C-terminus EYD11_10965 PF05681 Fumarate hydratase (Fumerase) EYD11_10970 PF10415 Fumarase C C-terminus EYD11_10970 PF00206 Lyase EYD11_10975 PF05472 DNA replication terminus site-binding protein (Ter protein) EYD11_10980 PF00512 His Kinase A (phospho-acceptor) domain EYD11_10980 PF00672 HAMP domain EYD11_10980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_10985 PF00072 Response regulator receiver domain EYD11_10985 PF00486 Transcriptional regulatory protein, C terminal EYD11_10990 PF06942 GlpM protein EYD11_11000 PF13520 Amino acid permease EYD11_11005 PF07338 Protein of unknown function (DUF1471) EYD11_11010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EYD11_11010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EYD11_11010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EYD11_11015 PF02233 NAD(P) transhydrogenase beta subunit EYD11_11020 PF01594 AI-2E family transporter EYD11_11030 PF00893 Small Multidrug Resistance protein EYD11_11035 PF00893 Small Multidrug Resistance protein EYD11_11040 PF00089 Trypsin EYD11_11055 PF07690 Major Facilitator Superfamily EYD11_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_11060 PF03466 LysR substrate binding domain EYD11_11065 PF00480 ROK family EYD11_11075 PF00654 Voltage gated chloride channel EYD11_11080 PF02613 Nitrate reductase delta subunit EYD11_11085 PF04976 DMSO reductase anchor subunit (DmsC) EYD11_11090 PF13247 4Fe-4S dicluster domain EYD11_11090 PF12800 4Fe-4S binding domain EYD11_11095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD11_11095 PF00384 Molybdopterin oxidoreductase EYD11_11095 PF01568 Molydopterin dinucleotide binding domain EYD11_11100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD11_11100 PF00384 Molybdopterin oxidoreductase EYD11_11100 PF01568 Molydopterin dinucleotide binding domain EYD11_11105 PF06649 Protein of unknown function (DUF1161) EYD11_11110 PF06788 Uncharacterised protein family (UPF0257) EYD11_11115 PF13302 Acetyltransferase (GNAT) domain EYD11_11120 PF06932 Protein of unknown function (DUF1283) EYD11_11125 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EYD11_11130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD11_11130 PF13378 Enolase C-terminal domain-like EYD11_11135 PF00107 Zinc-binding dehydrogenase EYD11_11135 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_11140 PF00083 Sugar (and other) transporter EYD11_11140 PF07690 Major Facilitator Superfamily EYD11_11145 PF01232 Mannitol dehydrogenase Rossmann domain EYD11_11145 PF08125 Mannitol dehydrogenase C-terminal domain EYD11_11150 PF14001 YdfZ protein EYD11_11155 PF07729 FCD domain EYD11_11155 PF00392 Bacterial regulatory proteins, gntR family EYD11_11160 PF00106 short chain dehydrogenase EYD11_11165 PF01432 Peptidase family M3 EYD11_11170 PF02464 Competence-damaged protein EYD11_11175 PF04076 Bacterial OB fold (BOF) protein EYD11_11180 PF00990 Diguanylate cyclase, GGDEF domain EYD11_11190 PF07690 Major Facilitator Superfamily EYD11_11195 PF00892 EamA-like transporter family EYD11_11200 PF13999 MarB protein EYD11_11205 PF12833 Helix-turn-helix domain EYD11_11210 PF01047 MarR family EYD11_11215 PF01914 MarC family integral membrane protein EYD11_11220 PF07690 Major Facilitator Superfamily EYD11_11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_11230 PF03466 LysR substrate binding domain EYD11_11235 PF00171 Aldehyde dehydrogenase family EYD11_11240 PF04960 Glutaminase EYD11_11245 PF13811 Domain of unknown function (DUF4186) EYD11_11250 PF00990 Diguanylate cyclase, GGDEF domain EYD11_11255 PF08125 Mannitol dehydrogenase C-terminal domain EYD11_11255 PF01232 Mannitol dehydrogenase Rossmann domain EYD11_11260 PF01062 Bestrophin, RFP-TM, chloride channel EYD11_11265 PF13649 Methyltransferase domain EYD11_11270 PF03992 Antibiotic biosynthesis monooxygenase EYD11_11275 PF01791 DeoC/LacD family aldolase EYD11_11280 PF13407 Periplasmic binding protein domain EYD11_11285 PF02653 Branched-chain amino acid transport system / permease component EYD11_11290 PF02653 Branched-chain amino acid transport system / permease component EYD11_11295 PF00005 ABC transporter EYD11_11300 PF04198 Putative sugar-binding domain EYD11_11305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_11305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD11_11310 PF13018 Extended Signal Peptide of Type V secretion system EYD11_11315 PF01381 Helix-turn-helix EYD11_11320 PF07804 HipA-like C-terminal domain EYD11_11320 PF13657 HipA N-terminal domain EYD11_11335 PF00419 Fimbrial protein EYD11_11340 PF00419 Fimbrial protein EYD11_11345 PF09160 FimH, mannose binding EYD11_11350 PF00384 Molybdopterin oxidoreductase EYD11_11355 PF17073 Two-component-system connector protein EYD11_11360 PF12833 Helix-turn-helix domain EYD11_11365 PF00884 Sulfatase EYD11_11370 PF04055 Radical SAM superfamily EYD11_11370 PF13186 Iron-sulfur cluster-binding domain EYD11_11380 PF00005 ABC transporter EYD11_11380 PF06472 ABC transporter transmembrane region 2 EYD11_11385 PF07715 TonB-dependent Receptor Plug Domain EYD11_11390 PF00675 Insulinase (Peptidase family M16) EYD11_11390 PF05193 Peptidase M16 inactive domain EYD11_11395 PF00282 Pyridoxal-dependent decarboxylase conserved domain EYD11_11400 PF13520 Amino acid permease EYD11_11410 PF00990 Diguanylate cyclase, GGDEF domain EYD11_11415 PF13426 PAS domain EYD11_11415 PF00990 Diguanylate cyclase, GGDEF domain EYD11_11415 PF00563 EAL domain EYD11_11420 PF01427 D-ala-D-ala dipeptidase EYD11_11425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_11430 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_11435 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_11435 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD11_11440 PF00005 ABC transporter EYD11_11440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_11445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_11445 PF00005 ABC transporter EYD11_11450 PF02566 OsmC-like protein EYD11_11455 PF10684 Putative biofilm-dependent modulation protein EYD11_11460 PF08136 30S ribosomal protein subunit S22 family EYD11_11465 PF03949 Malic enzyme, NAD binding domain EYD11_11465 PF00390 Malic enzyme, N-terminal domain EYD11_11470 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_11470 PF00107 Zinc-binding dehydrogenase EYD11_11475 PF01381 Helix-turn-helix EYD11_11480 PF01292 Prokaryotic cytochrome b561 EYD11_11485 PF13247 4Fe-4S dicluster domain EYD11_11485 PF09163 Formate dehydrogenase N, transmembrane EYD11_11485 PF12800 4Fe-4S binding domain EYD11_11495 PF00892 EamA-like transporter family EYD11_11500 PF00267 Gram-negative porin EYD11_11515 PF07690 Major Facilitator Superfamily EYD11_11525 PF13247 4Fe-4S dicluster domain EYD11_11525 PF14711 Respiratory nitrate reductase beta C-terminal EYD11_11530 PF02613 Nitrate reductase delta subunit EYD11_11535 PF02665 Nitrate reductase gamma subunit EYD11_11540 PF02567 Phenazine biosynthesis-like protein EYD11_11545 PF00797 N-acetyltransferase EYD11_11550 PF01613 Flavin reductase like domain EYD11_11555 PF01361 Tautomerase enzyme EYD11_11560 PF01609 Transposase DDE domain EYD11_11560 PF13808 DDE_Tnp_1-associated EYD11_11580 PF03527 RHS protein EYD11_11580 PF14220 Domain of unknown function (DUF4329) EYD11_11580 PF05593 RHS Repeat EYD11_11585 PF04717 Type VI secretion system, phage-baseplate injector EYD11_11590 PF17520 Family of unknown function (DUF5445) EYD11_11595 PF13417 Glutathione S-transferase, N-terminal domain EYD11_11600 PF00324 Amino acid permease EYD11_11610 PF00593 TonB dependent receptor EYD11_11610 PF07715 TonB-dependent Receptor Plug Domain EYD11_11615 PF00392 Bacterial regulatory proteins, gntR family EYD11_11615 PF07729 FCD domain EYD11_11620 PF00107 Zinc-binding dehydrogenase EYD11_11620 PF16884 N-terminal domain of oxidoreductase EYD11_11625 PF00583 Acetyltransferase (GNAT) family EYD11_11630 PF04657 Putative inner membrane exporter, YdcZ EYD11_11635 PF10735 Protein of unknown function (DUF2526) EYD11_11640 PF10753 Toxin GhoT_OrtT EYD11_11650 PF00171 Aldehyde dehydrogenase family EYD11_11655 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_11660 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_11665 PF08402 TOBE domain EYD11_11665 PF00005 ABC transporter EYD11_11670 PF13416 Bacterial extracellular solute-binding protein EYD11_11675 PF00155 Aminotransferase class I and II EYD11_11675 PF00392 Bacterial regulatory proteins, gntR family EYD11_11680 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system EYD11_11680 PF01381 Helix-turn-helix EYD11_11685 PF07927 HicA toxin of bacterial toxin-antitoxin, EYD11_11690 PF10829 Protein of unknown function (DUF2554) EYD11_11695 PF12392 Collagenase EYD11_11695 PF01136 Peptidase family U32 EYD11_11700 PF07883 Cupin domain EYD11_11700 PF01381 Helix-turn-helix EYD11_11705 PF03594 Benzoate membrane transport protein EYD11_11710 PF12323 Helix-turn-helix domain EYD11_11710 PF07282 Putative transposase DNA-binding domain EYD11_11710 PF01385 Probable transposase EYD11_11720 PF11769 Protein of unknown function (DUF3313) EYD11_11725 PF03848 Tellurite resistance protein TehB EYD11_11730 PF03595 Voltage-dependent anion channel EYD11_11735 PF18836 Beta solenoid repeat from YDCK EYD11_11740 PF13302 Acetyltransferase (GNAT) domain EYD11_11745 PF04325 Protein of unknown function (DUF465) EYD11_11750 PF04349 Periplasmic glucan biosynthesis protein, MdoG EYD11_11755 PF07063 Domain of unknown function (DUF1338) EYD11_11760 PF03466 LysR substrate binding domain EYD11_11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_11765 PF00672 HAMP domain EYD11_11765 PF02203 Tar ligand binding domain homologue EYD11_11765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD11_11775 PF01848 Hok/gef family EYD11_11785 PF01292 Prokaryotic cytochrome b561 EYD11_11795 PF00171 Aldehyde dehydrogenase family EYD11_11800 PF02698 DUF218 domain EYD11_11805 PF00271 Helicase conserved C-terminal domain EYD11_11805 PF00270 DEAD/DEAH box helicase EYD11_11805 PF04408 Helicase associated domain (HA2) EYD11_11805 PF11898 Domain of unknown function (DUF3418) EYD11_11805 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EYD11_11810 PF02525 Flavodoxin-like fold EYD11_11815 PF00782 Dual specificity phosphatase, catalytic domain EYD11_11820 PF12146 Serine aminopeptidase, S33 EYD11_11820 PF12147 Putative methyltransferase EYD11_11830 PF01066 CDP-alcohol phosphatidyltransferase EYD11_11835 PF10971 Protein of unknown function (DUF2773) EYD11_11840 PF00248 Aldo/keto reductase family EYD11_11865 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_11870 PF08223 PaaX-like protein C-terminal domain EYD11_11870 PF07848 PaaX-like protein EYD11_11875 PF14535 AMP-binding enzyme C-terminal domain EYD11_11875 PF00501 AMP-binding enzyme EYD11_11880 PF00108 Thiolase, N-terminal domain EYD11_11880 PF02803 Thiolase, C-terminal domain EYD11_11885 PF03061 Thioesterase superfamily EYD11_11890 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EYD11_11890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EYD11_11890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EYD11_11895 PF00378 Enoyl-CoA hydratase/isomerase EYD11_11900 PF00378 Enoyl-CoA hydratase/isomerase EYD11_11905 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_11905 PF00970 Oxidoreductase FAD-binding domain EYD11_11905 PF00175 Oxidoreductase NAD-binding domain EYD11_11910 PF01883 Iron-sulfur cluster assembly protein EYD11_11915 PF05138 Phenylacetic acid catabolic protein EYD11_11920 PF06243 Phenylacetic acid degradation B EYD11_11925 PF05138 Phenylacetic acid catabolic protein EYD11_11930 PF00171 Aldehyde dehydrogenase family EYD11_11930 PF01575 MaoC like domain EYD11_11935 PF07833 Copper amine oxidase N-terminal domain EYD11_11935 PF01179 Copper amine oxidase, enzyme domain EYD11_11935 PF02728 Copper amine oxidase, N3 domain EYD11_11935 PF02727 Copper amine oxidase, N2 domain EYD11_11940 PF00171 Aldehyde dehydrogenase family EYD11_11945 PF14525 AraC-binding-like domain EYD11_11945 PF12833 Helix-turn-helix domain EYD11_11950 PF07027 Protein of unknown function (DUF1318) EYD11_11955 PF13617 YnbE-like lipoprotein EYD11_11960 PF11739 Dicarboxylate transport EYD11_11965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD11_11965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD11_11970 PF03724 META domain EYD11_11975 PF03891 Domain of unknown function (DUF333) EYD11_11980 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EYD11_11980 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EYD11_11980 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EYD11_11980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_11980 PF10371 Domain of unknown function EYD11_11985 PF00267 Gram-negative porin EYD11_11990 PF00582 Universal stress protein family EYD11_11995 PF01171 PP-loop family EYD11_12000 PF03880 DbpA RNA binding domain EYD11_12000 PF00270 DEAD/DEAH box helicase EYD11_12000 PF00271 Helicase conserved C-terminal domain EYD11_12005 PF01544 CorA-like Mg2+ transporter protein EYD11_12165 PF00959 Phage lysozyme EYD11_12260 PF05866 Endodeoxyribonuclease RusA EYD11_12345 PF00436 Single-strand binding protein family EYD11_12390 PF00772 DnaB-like helicase N terminal domain EYD11_12390 PF03796 DnaB-like helicase C terminal domain EYD11_12410 PF05772 NinB protein EYD11_12435 PF01713 Smr domain EYD11_12440 PF03466 LysR substrate binding domain EYD11_12440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_12445 PF07687 Peptidase dimerisation domain EYD11_12445 PF01546 Peptidase family M20/M25/M40 EYD11_12450 PF01546 Peptidase family M20/M25/M40 EYD11_12455 PF03806 AbgT putative transporter family EYD11_12460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD11_12460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD11_12465 PF00325 Bacterial regulatory proteins, crp family EYD11_12465 PF00027 Cyclic nucleotide-binding domain EYD11_12470 PF00582 Universal stress protein family EYD11_12475 PF10749 Protein of unknown function (DUF2534) EYD11_12480 PF00924 Mechanosensitive ion channel EYD11_12485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_12490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_12490 PF03466 LysR substrate binding domain EYD11_12495 PF12146 Serine aminopeptidase, S33 EYD11_12510 PF00246 Zinc carboxypeptidase EYD11_12515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD11_12515 PF13378 Enolase C-terminal domain-like EYD11_12520 PF08534 Redoxin EYD11_12525 PF18024 Helix-turn-helix domain EYD11_12525 PF00158 Sigma-54 interaction domain EYD11_12525 PF13188 PAS domain EYD11_12530 PF05128 Domain of unknown function (DUF697) EYD11_12535 PF04317 YcjX-like family, DUF463 EYD11_12540 PF00356 Bacterial regulatory proteins, lacI family EYD11_12540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD11_12545 PF09381 Outer membrane protein G (OmpG) EYD11_12550 PF17912 MalK OB fold domain EYD11_12550 PF00005 ABC transporter EYD11_12550 PF03459 TOBE domain EYD11_12555 PF13419 Haloacid dehalogenase-like hydrolase EYD11_12560 PF03636 Glycosyl hydrolase family 65, N-terminal domain EYD11_12560 PF03633 Glycosyl hydrolase family 65, C-terminal domain EYD11_12560 PF03632 Glycosyl hydrolase family 65 central catalytic domain EYD11_12565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD11_12565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD11_12570 PF01261 Xylose isomerase-like TIM barrel EYD11_12575 PF00107 Zinc-binding dehydrogenase EYD11_12580 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_12585 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_12595 PF00128 Alpha amylase, catalytic domain EYD11_12600 PF00581 Rhodanese-like domain EYD11_12605 PF09584 Phage shock protein PspD (Phageshock_PspD) EYD11_12610 PF04024 PspC domain EYD11_12615 PF06667 Phage shock protein B EYD11_12620 PF04012 PspA/IM30 family EYD11_12625 PF02954 Bacterial regulatory protein, Fis family EYD11_12625 PF00158 Sigma-54 interaction domain EYD11_12630 PF00202 Aminotransferase class-III EYD11_12635 PF01266 FAD dependent oxidoreductase EYD11_12640 PF00171 Aldehyde dehydrogenase family EYD11_12645 PF07883 Cupin domain EYD11_12645 PF01381 Helix-turn-helix EYD11_12650 PF07722 Peptidase C26 EYD11_12655 PF00120 Glutamine synthetase, catalytic domain EYD11_12665 PF00324 Amino acid permease EYD11_12670 PF10820 Protein of unknown function (DUF2543) EYD11_12675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_12680 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_12685 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_12685 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD11_12690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_12690 PF00005 ABC transporter EYD11_12695 PF00005 ABC transporter EYD11_12700 PF04480 Protein of unknown function (DUF559) EYD11_12715 PF08206 Ribonuclease B OB domain EYD11_12715 PF00773 RNB domain EYD11_12715 PF00575 S1 RNA binding domain EYD11_12715 PF17876 Cold shock domain EYD11_12725 PF00990 Diguanylate cyclase, GGDEF domain EYD11_12725 PF13426 PAS domain EYD11_12725 PF00563 EAL domain EYD11_12735 PF00455 DeoR C terminal sensor domain EYD11_12735 PF08220 DeoR-like helix-turn-helix domain EYD11_12740 PF05433 Glycine zipper 2TM domain EYD11_12745 PF01253 Translation initiation factor SUI1 EYD11_12750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EYD11_12755 PF18073 Rubredoxin metal binding domain EYD11_12760 PF06305 Lipopolysaccharide assembly protein A domain EYD11_12765 PF01569 PAP2 superfamily EYD11_12770 PF00925 GTP cyclohydrolase II EYD11_12775 PF00330 Aconitase family (aconitate hydratase) EYD11_12775 PF00694 Aconitase C-terminal domain EYD11_12800 PF03466 LysR substrate binding domain EYD11_12800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_12805 PF08272 Topoisomerase I zinc-ribbon-like EYD11_12805 PF01131 DNA topoisomerase EYD11_12805 PF01751 Toprim domain EYD11_12805 PF01396 Topoisomerase DNA binding C4 zinc finger EYD11_12810 PF10692 Protein of unknown function (DUF2498) EYD11_12815 PF08496 Peptidase family S49 N-terminal EYD11_12815 PF01343 Peptidase family S49 EYD11_12820 PF00106 short chain dehydrogenase EYD11_12825 PF12557 Cob(I)alamin adenosyltransferase N terminal EYD11_12825 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EYD11_12830 PF00849 RNA pseudouridylate synthase EYD11_12830 PF01479 S4 domain EYD11_12835 PF09972 Predicted membrane protein (DUF2207) EYD11_12840 PF01300 Telomere recombination EYD11_12845 PF02811 PHP domain EYD11_12850 PF08255 Trp-operon Leader Peptide EYD11_12855 PF04715 Anthranilate synthase component I, N terminal region EYD11_12855 PF00425 chorismate binding enzyme EYD11_12860 PF00117 Glutamine amidotransferase class-I EYD11_12860 PF02885 Glycosyl transferase family, helical bundle domain EYD11_12860 PF00591 Glycosyl transferase family, a/b domain EYD11_12865 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EYD11_12865 PF00218 Indole-3-glycerol phosphate synthase EYD11_12870 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_12875 PF00290 Tryptophan synthase alpha chain EYD11_12880 PF10685 Stress-induced bacterial acidophilic repeat motif EYD11_12885 PF05974 Domain of unknown function (DUF892) EYD11_12890 PF05974 Domain of unknown function (DUF892) EYD11_12895 PF03922 OmpW family EYD11_12910 PF04279 Intracellular septation protein A EYD11_12915 PF03061 Thioesterase superfamily EYD11_12920 PF03544 Gram-negative bacterial TonB protein C-terminal EYD11_12925 PF03795 YCII-related domain EYD11_12930 PF07885 Ion channel EYD11_12930 PF02254 TrkA-N domain EYD11_12940 PF13396 Phospholipase_D-nuclease N-terminal EYD11_12940 PF13091 PLD-like domain EYD11_12945 PF04269 Protein of unknown function, DUF440 EYD11_12950 PF00005 ABC transporter EYD11_12950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_12955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_12955 PF00005 ABC transporter EYD11_12960 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_12960 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD11_12965 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_12970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_12975 PF01914 MarC family integral membrane protein EYD11_12980 PF00465 Iron-containing alcohol dehydrogenase EYD11_12980 PF00171 Aldehyde dehydrogenase family EYD11_12990 PF00265 Thymidine kinase EYD11_12995 PF00816 H-NS histone family EYD11_13000 PF00483 Nucleotidyl transferase EYD11_13005 PF00072 Response regulator receiver domain EYD11_13010 PF01734 Patatin-like phospholipase EYD11_13015 PF02810 SEC-C motif EYD11_13020 PF01842 ACT domain EYD11_13020 PF00551 Formyl transferase EYD11_13055 PF02665 Nitrate reductase gamma subunit EYD11_13060 PF02613 Nitrate reductase delta subunit EYD11_13065 PF13247 4Fe-4S dicluster domain EYD11_13065 PF14711 Respiratory nitrate reductase beta C-terminal EYD11_13070 PF14710 Respiratory nitrate reductase alpha N-terminal EYD11_13070 PF01568 Molydopterin dinucleotide binding domain EYD11_13070 PF00384 Molybdopterin oxidoreductase EYD11_13075 PF07690 Major Facilitator Superfamily EYD11_13080 PF00672 HAMP domain EYD11_13080 PF07730 Histidine kinase EYD11_13080 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EYD11_13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_13085 PF00196 Bacterial regulatory proteins, luxR family EYD11_13085 PF00072 Response regulator receiver domain EYD11_13090 PF11924 Inverse autotransporter, beta-domain EYD11_13095 PF02635 DsrE/DsrF-like family EYD11_13100 PF04752 ChaC-like protein EYD11_13105 PF06150 ChaB EYD11_13110 PF01699 Sodium/calcium exchanger protein EYD11_13120 PF13940 Toxin Ldr, type I toxin-antitoxin system EYD11_13125 PF13940 Toxin Ldr, type I toxin-antitoxin system EYD11_13130 PF13940 Toxin Ldr, type I toxin-antitoxin system EYD11_13135 PF00793 DAHP synthetase I family EYD11_13140 PF13369 Transglutaminase-like superfamily EYD11_13145 PF04247 Invasion gene expression up-regulator, SirB EYD11_13150 PF17827 PrmC N-terminal domain EYD11_13150 PF13847 Methyltransferase domain EYD11_13155 PF00472 RF-1 domain EYD11_13155 PF03462 PCRF domain EYD11_13160 PF01488 Shikimate / quinate 5-dehydrogenase EYD11_13160 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EYD11_13160 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EYD11_13165 PF03550 Outer membrane lipoprotein LolB EYD11_13170 PF08544 GHMP kinases C terminal EYD11_13170 PF00288 GHMP kinases N terminal domain EYD11_13175 PF14572 Phosphoribosyl synthetase-associated domain EYD11_13175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EYD11_13180 PF00916 Sulfate permease family EYD11_13180 PF01740 STAS domain EYD11_13185 PF10762 Protein of unknown function (DUF2583) EYD11_13190 PF01195 Peptidyl-tRNA hydrolase EYD11_13195 PF01926 50S ribosome-binding GTPase EYD11_13195 PF06071 Protein of unknown function (DUF933) EYD11_13200 PF03212 Pertactin EYD11_13200 PF03797 Autotransporter beta-domain EYD11_13205 PF00989 PAS fold EYD11_13205 PF00158 Sigma-54 interaction domain EYD11_13205 PF02954 Bacterial regulatory protein, Fis family EYD11_13210 PF02733 Dak1 domain EYD11_13215 PF02734 DAK2 domain EYD11_13220 PF05524 PEP-utilising enzyme, N-terminal EYD11_13220 PF03610 PTS system fructose IIA component EYD11_13220 PF00391 PEP-utilising enzyme, mobile domain EYD11_13220 PF00381 PTS HPr component phosphorylation site EYD11_13225 PF01204 Trehalase EYD11_13235 PF04226 Transglycosylase associated protein EYD11_13240 PF07317 Flagellar regulator YcgR EYD11_13240 PF07238 PilZ domain EYD11_13245 PF01464 Transglycosylase SLT domain EYD11_13250 PF02016 LD-carboxypeptidase N-terminal domain EYD11_13250 PF17676 LD-carboxypeptidase C-terminal domain EYD11_13255 PF03471 Transporter associated domain EYD11_13255 PF00999 Sodium/hydrogen exchanger family EYD11_13255 PF02080 TrkA-C domain EYD11_13260 PF01168 Alanine racemase, N-terminal domain EYD11_13260 PF00842 Alanine racemase, C-terminal domain EYD11_13265 PF01266 FAD dependent oxidoreductase EYD11_13270 PF04293 SpoVR like protein EYD11_13275 PF00392 Bacterial regulatory proteins, gntR family EYD11_13275 PF07840 FadR C-terminal domain EYD11_13280 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EYD11_13285 PF02600 Disulfide bond formation protein DsbB EYD11_13290 PF13438 Domain of unknown function (DUF4113) EYD11_13290 PF00817 impB/mucB/samB family EYD11_13290 PF11798 IMS family HHH motif EYD11_13290 PF11799 impB/mucB/samB family C-terminal domain EYD11_13295 PF00717 Peptidase S24-like EYD11_13300 PF06109 Haemolysin E (HlyE) EYD11_13305 PF03692 Putative zinc- or iron-chelating domain EYD11_13310 PF01557 Fumarylacetoacetate (FAA) hydrolase family EYD11_13315 PF05166 YcgL domain EYD11_13320 PF04151 Bacterial pre-peptidase C-terminal domain EYD11_13325 PF05666 Fels-1 Prophage Protein-like EYD11_13330 PF05209 Septum formation inhibitor MinC, N-terminal domain EYD11_13330 PF03775 Septum formation inhibitor MinC, C-terminal domain EYD11_13335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYD11_13340 PF03776 Septum formation topological specificity factor MinE EYD11_13360 PF13436 Glycine-zipper domain EYD11_13380 PF12792 CSS motif domain associated with EAL EYD11_13380 PF00563 EAL domain EYD11_13390 PF10798 Biofilm development protein YmgB/AriR EYD11_13400 PF10798 Biofilm development protein YmgB/AriR EYD11_13405 PF04940 Sensors of blue-light using FAD EYD11_13405 PF00563 EAL domain EYD11_13410 PF13411 MerR HTH family regulatory protein EYD11_13415 PF07166 Protein of unknown function (DUF1398) EYD11_13430 PF00180 Isocitrate/isopropylmalate dehydrogenase EYD11_13435 PF00849 RNA pseudouridylate synthase EYD11_13440 PF00293 NUDIX domain EYD11_13450 PF04356 Protein of unknown function (DUF489) EYD11_13455 PF00206 Lyase EYD11_13455 PF08328 Adenylosuccinate lyase C-terminal EYD11_13460 PF00072 Response regulator receiver domain EYD11_13460 PF00486 Transcriptional regulatory protein, C terminal EYD11_13465 PF08918 PhoQ Sensor EYD11_13465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_13470 PF08007 Cupin superfamily protein EYD11_13475 PF01546 Peptidase family M20/M25/M40 EYD11_13475 PF07687 Peptidase dimerisation domain EYD11_13480 PF00005 ABC transporter EYD11_13480 PF08402 TOBE domain EYD11_13485 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_13495 PF08242 Methyltransferase domain EYD11_13525 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EYD11_13545 PF06316 Enterobacterial Ail/Lom protein EYD11_13650 PF06291 Bor protein EYD11_13655 PF06085 Lipoprotein Rz1 precursor EYD11_13660 PF00959 Phage lysozyme EYD11_13665 PF07041 Protein of unknown function (DUF1327) EYD11_13670 PF04971 Bacteriophage P21 holin S EYD11_13700 PF03589 Antitermination protein EYD11_13705 PF05866 Endodeoxyribonuclease RusA EYD11_13710 PF06147 Protein of unknown function (DUF968) EYD11_13720 PF01848 Hok/gef family EYD11_13755 PF17948 DnaT DNA-binding domain EYD11_13790 PF05358 DicB protein EYD11_13795 PF07358 Protein of unknown function (DUF1482) EYD11_13800 PF06630 Enterobacterial exodeoxyribonuclease VIII EYD11_13800 PF12684 PDDEXK-like domain of unknown function (DUF3799) EYD11_13810 PF00589 Phage integrase family EYD11_13810 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain EYD11_13815 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_13820 PF13416 Bacterial extracellular solute-binding protein EYD11_13825 PF12158 Protein of unknown function (DUF3592) EYD11_13830 PF04536 TPM domain EYD11_13835 PF02146 Sir2 family EYD11_13840 PF00480 ROK family EYD11_13845 PF02687 FtsX-like permease family EYD11_13845 PF12704 MacB-like periplasmic core domain EYD11_13850 PF00005 ABC transporter EYD11_13855 PF12704 MacB-like periplasmic core domain EYD11_13855 PF02687 FtsX-like permease family EYD11_13860 PF01757 Acyltransferase family EYD11_13865 PF00270 DEAD/DEAH box helicase EYD11_13865 PF03461 TRCF domain EYD11_13865 PF00271 Helicase conserved C-terminal domain EYD11_13865 PF17757 UvrB interaction domain EYD11_13865 PF02559 CarD-like/TRCF domain EYD11_13870 PF03734 L,D-transpeptidase catalytic domain EYD11_13870 PF17969 L,D-transpeptidase C-terminal domain EYD11_13870 PF01476 LysM domain EYD11_13875 PF07338 Protein of unknown function (DUF1471) EYD11_13880 PF00440 Bacterial regulatory proteins, tetR family EYD11_13885 PF05433 Glycine zipper 2TM domain EYD11_13890 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_13895 PF05728 Uncharacterised protein family (UPF0227) EYD11_13900 PF00933 Glycosyl hydrolase family 3 N terminal domain EYD11_13905 PF01636 Phosphotransferase enzyme family EYD11_13910 PF13036 Peptidoglycan-synthase activator LpoB EYD11_13915 PF07233 Protein of unknown function (DUF1425) EYD11_13920 PF01230 HIT domain EYD11_13925 PF07715 TonB-dependent Receptor Plug Domain EYD11_13925 PF00593 TonB dependent receptor EYD11_13930 PF02378 Phosphotransferase system, EIIC EYD11_13930 PF00367 phosphotransferase system, EIIB EYD11_13935 PF01026 TatD related DNase EYD11_13940 PF09115 DNA polymerase III, delta subunit, C terminal EYD11_13945 PF02223 Thymidylate kinase EYD11_13950 PF02618 YceG-like family EYD11_13955 PF01063 Amino-transferase class IV EYD11_13960 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD11_13960 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD11_13965 PF00550 Phosphopantetheine attachment site EYD11_13975 PF00698 Acyl transferase domain EYD11_13980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EYD11_13980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EYD11_13985 PF02504 Fatty acid synthesis protein EYD11_13990 PF01783 Ribosomal L32p protein family EYD11_13995 PF02620 Large ribosomal RNA subunit accumulation protein YceD EYD11_14000 PF02545 Maf-like protein EYD11_14005 PF01479 S4 domain EYD11_14005 PF00849 RNA pseudouridylate synthase EYD11_14020 PF00575 S1 RNA binding domain EYD11_14020 PF10150 Ribonuclease E/G family EYD11_14020 PF12111 Polyribonucleotide phosphorylase C terminal EYD11_14025 PF00669 Bacterial flagellin N-terminal helical region EYD11_14030 PF00460 Flagella basal body rod protein EYD11_14030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD11_14035 PF10135 Rod binding protein EYD11_14035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EYD11_14040 PF02119 Flagellar P-ring protein EYD11_14045 PF02107 Flagellar L-ring protein EYD11_14050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD11_14050 PF00460 Flagella basal body rod protein EYD11_14055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD11_14055 PF00460 Flagella basal body rod protein EYD11_14060 PF00460 Flagella basal body rod protein EYD11_14060 PF07559 Flagellar basal body protein FlaE EYD11_14060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD11_14065 PF03963 Flagellar hook capping protein - N-terminal region EYD11_14065 PF13860 FlgD Ig-like domain EYD11_14065 PF13861 FlgD Tudor-like domain EYD11_14070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD11_14070 PF00460 Flagella basal body rod protein EYD11_14075 PF00460 Flagella basal body rod protein EYD11_14080 PF13144 Chaperone for flagella basal body P-ring formation EYD11_14085 PF04316 Anti-sigma-28 factor, FlgM EYD11_14090 PF05130 FlgN protein EYD11_14095 PF03023 Lipid II flippase MurJ EYD11_14100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD11_14105 PF04337 Protein of unknown function, DUF480 EYD11_14110 PF13302 Acetyltransferase (GNAT) domain EYD11_14115 PF07690 Major Facilitator Superfamily EYD11_14120 PF13417 Glutathione S-transferase, N-terminal domain EYD11_14120 PF04399 Glutaredoxin 2, C terminal domain EYD11_14125 PF07273 Protein of unknown function (DUF1439) EYD11_14130 PF01979 Amidohydrolase family EYD11_14135 PF06183 DinI-like family EYD11_14140 PF13991 BssS protein family EYD11_14145 PF01266 FAD dependent oxidoreductase EYD11_14150 PF10968 Protein of unknown function (DUF2770) EYD11_14155 PF01292 Prokaryotic cytochrome b561 EYD11_14160 PF04264 YceI-like domain EYD11_14170 PF03279 Bacterial lipid A biosynthesis acyltransferase EYD11_14175 PF07690 Major Facilitator Superfamily EYD11_14180 PF13984 MsyB protein EYD11_14185 PF07119 Protein of unknown function (DUF1375) EYD11_14190 PF00535 Glycosyl transferase family 2 EYD11_14195 PF04349 Periplasmic glucan biosynthesis protein, MdoG EYD11_14200 PF01757 Acyltransferase family EYD11_14205 PF13091 PLD-like domain EYD11_14210 PF01661 Macro domain EYD11_14220 PF10610 Thin aggregative fimbriae synthesis protein EYD11_14225 PF07012 Curlin associated repeat EYD11_14230 PF07012 Curlin associated repeat EYD11_14235 PF00196 Bacterial regulatory proteins, luxR family EYD11_14240 PF10627 Curli assembly protein CsgE EYD11_14245 PF10614 Type VIII secretion system (T8SS), CsgF protein EYD11_14250 PF03783 Curli production assembly/transport component CsgG EYD11_14255 PF06496 Protein of unknown function (DUF1097) EYD11_14260 PF02613 Nitrate reductase delta subunit EYD11_14265 PF02811 PHP domain EYD11_14270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD11_14300 PF00990 Diguanylate cyclase, GGDEF domain EYD11_14300 PF17158 Membrane-associated sensor, integral membrane domain EYD11_14310 PF01522 Polysaccharide deacetylase EYD11_14310 PF14883 Hypothetical glycosyl hydrolase family 13 EYD11_14315 PF00535 Glycosyl transferase family 2 EYD11_14320 PF13994 PgaD-like protein EYD11_14325 PF02562 PhoH-like protein EYD11_14330 PF04261 Dyp-type peroxidase family EYD11_14335 PF09375 Imelysin EYD11_14335 PF13473 Cupredoxin-like domain EYD11_14340 PF03239 Iron permease FTR1 family EYD11_14345 PF00474 Sodium:solute symporter family EYD11_14355 PF01619 Proline dehydrogenase EYD11_14355 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EYD11_14355 PF00171 Aldehyde dehydrogenase family EYD11_14355 PF14850 DNA-binding domain of Proline dehydrogenase EYD11_14360 PF00440 Bacterial regulatory proteins, tetR family EYD11_14360 PF08362 YcdC-like protein, C-terminal region EYD11_14370 PF00296 Luciferase-like monooxygenase EYD11_14375 PF00857 Isochorismatase family EYD11_14380 PF01042 Endoribonuclease L-PSP EYD11_14385 PF12697 Alpha/beta hydrolase family EYD11_14390 PF00881 Nitroreductase family EYD11_14395 PF01613 Flavin reductase like domain EYD11_14400 PF00860 Permease family EYD11_14405 PF10685 Stress-induced bacterial acidophilic repeat motif EYD11_14410 PF03358 NADPH-dependent FMN reductase EYD11_14415 PF13993 YccJ-like protein EYD11_14420 PF00328 Histidine phosphatase superfamily (branch 2) EYD11_14430 PF00226 DnaJ domain EYD11_14430 PF01556 DnaJ C terminal domain EYD11_14440 PF02613 Nitrate reductase delta subunit EYD11_14445 PF18364 Molybdopterin oxidoreductase N-terminal domain EYD11_14445 PF01568 Molydopterin dinucleotide binding domain EYD11_14445 PF00384 Molybdopterin oxidoreductase EYD11_14450 PF03264 NapC/NirT cytochrome c family, N-terminal region EYD11_14455 PF00072 Response regulator receiver domain EYD11_14455 PF00486 Transcriptional regulatory protein, C terminal EYD11_14460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD11_14465 PF00072 Response regulator receiver domain EYD11_14465 PF00512 His Kinase A (phospho-acceptor) domain EYD11_14465 PF01627 Hpt domain EYD11_14465 PF00672 HAMP domain EYD11_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_14470 PF12801 4Fe-4S binding domain EYD11_14475 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system EYD11_14480 PF15939 Putative antitoxin of bacterial toxin-antitoxin system EYD11_14490 PF00313 'Cold-shock' DNA-binding domain EYD11_14495 PF00313 'Cold-shock' DNA-binding domain EYD11_14505 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF EYD11_14510 PF06251 Capsule biosynthesis GfcC EYD11_14515 PF06082 Exopolysaccharide biosynthesis protein YbjH EYD11_14520 PF10531 SLBB domain EYD11_14520 PF02563 Polysaccharide biosynthesis/export protein EYD11_14520 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EYD11_14525 PF01451 Low molecular weight phosphotyrosine protein phosphatase EYD11_14530 PF02706 Chain length determinant protein EYD11_14530 PF13807 G-rich domain on putative tyrosine kinase EYD11_14530 PF13614 AAA domain EYD11_14535 PF00328 Histidine phosphatase superfamily (branch 2) EYD11_14540 PF08173 Membrane bound YbgT-like protein EYD11_14545 PF02322 Cytochrome bd terminal oxidase subunit II EYD11_14550 PF01654 Cytochrome bd terminal oxidase subunit I EYD11_14555 PF04809 HupH hydrogenase expression protein, C-terminal conserved region EYD11_14560 PF07449 Hydrogenase-1 expression protein HyaE EYD11_14565 PF01750 Hydrogenase maturation protease EYD11_14570 PF01292 Prokaryotic cytochrome b561 EYD11_14575 PF00374 Nickel-dependent hydrogenase EYD11_14580 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EYD11_14580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYD11_14590 PF01027 Inhibitor of apoptosis-promoting Bax1 EYD11_14595 PF04358 DsrC like protein EYD11_14600 PF00708 Acylphosphatase EYD11_14605 PF10672 S-adenosylmethionine-dependent methyltransferase EYD11_14605 PF17785 PUA-like domain EYD11_14610 PF08755 Hemimethylated DNA-binding protein YccV like EYD11_14615 PF13380 CoA binding domain EYD11_14620 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EYD11_14625 PF02142 MGS-like domain EYD11_14630 PF12462 DNA helicase IV / RNA helicase N terminal EYD11_14630 PF00580 UvrD/REP helicase N-terminal domain EYD11_14630 PF13361 UvrD-like helicase C-terminal domain EYD11_14635 PF03733 Inner membrane component domain EYD11_14640 PF12805 FUSC-like inner membrane protein yccS EYD11_14645 PF04994 TfoX C-terminal domain EYD11_14645 PF04993 TfoX N-terminal domain EYD11_14650 PF03846 Cell division inhibitor SulA EYD11_14655 PF01389 OmpA-like transmembrane domain EYD11_14655 PF00691 OmpA family EYD11_14660 PF17414 MatP C-terminal ribbon-helix-helix domain EYD11_14660 PF06303 MatP N-terminal domain EYD11_14665 PF05362 Lon protease (S16) C-terminal proteolytic domain EYD11_14665 PF13654 AAA domain EYD11_14670 PF07977 FabA-like domain EYD11_14675 PF04957 Ribosome modulation factor EYD11_14680 PF03886 ABC-type transport auxiliary lipoprotein component EYD11_14685 PF02470 MlaD protein EYD11_14690 PF04403 Paraquat-inducible protein A EYD11_14695 PF00005 ABC transporter EYD11_14695 PF12848 ABC transporter EYD11_14695 PF16326 ABC transporter C-terminal domain EYD11_14700 PF10672 S-adenosylmethionine-dependent methyltransferase EYD11_14700 PF02926 THUMP domain EYD11_14700 PF01170 Putative RNA methylase family UPF0020 EYD11_14705 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_14705 PF03473 MOSC domain EYD11_14705 PF03476 MOSC N-terminal beta barrel domain EYD11_14710 PF07126 Cell-division protein ZapC EYD11_14715 PF01180 Dihydroorotate dehydrogenase EYD11_14720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_14720 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_14725 PF00419 Fimbrial protein EYD11_14730 PF00419 Fimbrial protein EYD11_14735 PF00419 Fimbrial protein EYD11_14740 PF00577 Outer membrane usher protein EYD11_14740 PF13953 PapC C-terminal domain EYD11_14740 PF13954 PapC N-terminal domain EYD11_14745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_14745 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_14750 PF00419 Fimbrial protein EYD11_14755 PF03358 NADPH-dependent FMN reductase EYD11_14760 PF09084 NMT1/THI5 like EYD11_14765 PF00296 Luciferase-like monooxygenase EYD11_14770 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_14775 PF00005 ABC transporter EYD11_14780 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EYD11_14780 PF01433 Peptidase family M1 domain EYD11_14780 PF11940 Domain of unknown function (DUF3458) Ig-like fold EYD11_14785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EYD11_14785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EYD11_14790 PF01336 OB-fold nucleic acid binding domain EYD11_14790 PF00152 tRNA synthetases class II (D, K and N) EYD11_14795 PF00267 Gram-negative porin EYD11_14800 PF00155 Aminotransferase class I and II EYD11_14805 PF00753 Metallo-beta-lactamase superfamily EYD11_14810 PF05951 Bacterial protein of unknown function (DUF882) EYD11_14815 PF01471 Putative peptidoglycan binding domain EYD11_14815 PF03734 L,D-transpeptidase catalytic domain EYD11_14820 PF04310 MukB N-terminal EYD11_14820 PF16330 MukB hinge domain EYD11_14825 PF04288 MukE-like family EYD11_14830 PF17193 MukF C-terminal domain EYD11_14830 PF17192 MukF middle domain EYD11_14830 PF03882 MukF winged-helix domain EYD11_14835 PF13847 Methyltransferase domain EYD11_14840 PF02698 DUF218 domain EYD11_14845 PF01636 Phosphotransferase enzyme family EYD11_14850 PF02348 Cytidylyltransferase EYD11_14855 PF03966 Trm112p-like protein EYD11_14860 PF06224 Winged helix DNA-binding domain EYD11_14865 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EYD11_14870 PF00005 ABC transporter EYD11_14870 PF00664 ABC transporter transmembrane region EYD11_14875 PF00753 Metallo-beta-lactamase superfamily EYD11_14875 PF03772 Competence protein EYD11_14880 PF00216 Bacterial DNA-binding protein EYD11_14885 PF00575 S1 RNA binding domain EYD11_14890 PF02224 Cytidylate kinase EYD11_14895 PF01435 Peptidase family M48 EYD11_14900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EYD11_14905 PF00266 Aminotransferase class-V EYD11_14910 PF04239 Protein of unknown function (DUF421) EYD11_14915 PF18381 YcaO cyclodehydratase C-terminal domain EYD11_14915 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EYD11_14920 PF01226 Formate/nitrite transporter EYD11_14925 PF02901 Pyruvate formate lyase-like EYD11_14925 PF01228 Glycine radical EYD11_14930 PF04055 Radical SAM superfamily EYD11_14935 PF02525 Flavodoxin-like fold EYD11_14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_14940 PF03466 LysR substrate binding domain EYD11_14945 PF13520 Amino acid permease EYD11_14950 PF07690 Major Facilitator Superfamily EYD11_14955 PF00857 Isochorismatase family EYD11_14960 PF04976 DMSO reductase anchor subunit (DmsC) EYD11_14965 PF13247 4Fe-4S dicluster domain EYD11_14965 PF12800 4Fe-4S binding domain EYD11_14970 PF00384 Molybdopterin oxidoreductase EYD11_14970 PF01568 Molydopterin dinucleotide binding domain EYD11_14970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD11_14975 PF02403 Seryl-tRNA synthetase N-terminal domain EYD11_14975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYD11_14980 PF12002 MgsA AAA+ ATPase C terminal EYD11_14980 PF16193 AAA C-terminal domain EYD11_14980 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_14985 PF03548 Outer membrane lipoprotein carrier protein LolA EYD11_14990 PF17854 FtsK alpha domain EYD11_14990 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EYD11_14990 PF01580 FtsK/SpoIIIE family EYD11_14990 PF09397 Ftsk gamma domain EYD11_14995 PF01037 Lrp/AsnC ligand binding domain EYD11_15000 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_15005 PF00664 ABC transporter transmembrane region EYD11_15005 PF00005 ABC transporter EYD11_15010 PF00664 ABC transporter transmembrane region EYD11_15010 PF00005 ABC transporter EYD11_15015 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EYD11_15020 PF01176 Translation initiation factor 1A / IF-1 EYD11_15035 PF02861 Clp amino terminal domain, pathogenicity island component EYD11_15035 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_15035 PF07724 AAA domain (Cdc48 subfamily) EYD11_15035 PF10431 C-terminal, D2-small domain, of ClpB protein EYD11_15035 PF17871 AAA lid domain EYD11_15040 PF02617 ATP-dependent Clp protease adaptor protein ClpS EYD11_15045 PF00313 'Cold-shock' DNA-binding domain EYD11_15050 PF12704 MacB-like periplasmic core domain EYD11_15050 PF00005 ABC transporter EYD11_15050 PF02687 FtsX-like permease family EYD11_15055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_15060 PF04393 Protein of unknown function (DUF535) EYD11_15065 PF11398 Protein of unknown function (DUF2813) EYD11_15070 PF00230 Major intrinsic protein EYD11_15075 PF03956 Lysine exporter LysO EYD11_15080 PF03063 Prismane/CO dehydrogenase family EYD11_15085 PF00970 Oxidoreductase FAD-binding domain EYD11_15085 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_15085 PF00175 Oxidoreductase NAD-binding domain EYD11_15090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_15090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD11_15090 PF00205 Thiamine pyrophosphate enzyme, central domain EYD11_15095 PF01212 Beta-eliminating lyase EYD11_15100 PF13460 NAD(P)H-binding EYD11_15100 PF11066 Protein of unknown function (DUF2867) EYD11_15105 PF01370 NAD dependent epimerase/dehydratase family EYD11_15110 PF01510 N-acetylmuramoyl-L-alanine amidase EYD11_15115 PF01906 Putative heavy-metal-binding EYD11_15120 PF12883 Protein of unknown function (DUF3828) EYD11_15125 PF00005 ABC transporter EYD11_15130 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_15135 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15140 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15145 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_15150 PF05958 tRNA (Uracil-5-)-methyltransferase EYD11_15155 PF10767 Protein of unknown function (DUF2593) EYD11_15160 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15165 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15170 PF08402 TOBE domain EYD11_15170 PF00005 ABC transporter EYD11_15175 PF13416 Bacterial extracellular solute-binding protein EYD11_15180 PF10722 Putative bacterial sensory transduction regulator EYD11_15185 PF18030 RimK PreATP-grasp domain EYD11_15185 PF08443 RimK-like ATP-grasp domain EYD11_15190 PF00881 Nitroreductase family EYD11_15195 PF07214 Protein of unknown function (DUF1418) EYD11_15200 PF00462 Glutaredoxin EYD11_15205 PF11045 Putative inner membrane protein of Enterobacteriaceae EYD11_15210 PF02080 TrkA-C domain EYD11_15210 PF06826 Predicted Permease Membrane Region EYD11_15215 PF00440 Bacterial regulatory proteins, tetR family EYD11_15220 PF07690 Major Facilitator Superfamily EYD11_15235 PF07690 Major Facilitator Superfamily EYD11_15240 PF01569 PAP2 superfamily EYD11_15245 PF00455 DeoR C terminal sensor domain EYD11_15245 PF08220 DeoR-like helix-turn-helix domain EYD11_15250 PF07943 Penicillin-binding protein 5, C-terminal domain EYD11_15250 PF00768 D-alanyl-D-alanine carboxypeptidase EYD11_15255 PF00043 Glutathione S-transferase, C-terminal domain EYD11_15255 PF13417 Glutathione S-transferase, N-terminal domain EYD11_15260 PF07995 Glucose / Sorbosone dehydrogenase EYD11_15265 PF10799 Biofilm formation protein (YliH/bssR) EYD11_15270 PF00919 Uncharacterized protein family UPF0004 EYD11_15270 PF18693 TRAM domain EYD11_15270 PF04055 Radical SAM superfamily EYD11_15275 PF17156 Gammaproteobacterial periplasmic sensor domain EYD11_15275 PF00990 Diguanylate cyclase, GGDEF domain EYD11_15285 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15285 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD11_15290 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_15300 PF00005 ABC transporter EYD11_15300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD11_15305 PF01112 Asparaginase EYD11_15310 PF00994 Probable molybdopterin binding domain EYD11_15310 PF03454 MoeA C-terminal region (domain IV) EYD11_15310 PF03453 MoeA N-terminal region (domain I and II) EYD11_15315 PF00899 ThiF family EYD11_15320 PF00923 Transaldolase/Fructose-6-phosphate aldolase EYD11_15325 PF04055 Radical SAM superfamily EYD11_15340 PF07350 Protein of unknown function (DUF1479) EYD11_15345 PF12848 ABC transporter EYD11_15345 PF00005 ABC transporter EYD11_15350 PF03734 L,D-transpeptidase catalytic domain EYD11_15350 PF17969 L,D-transpeptidase C-terminal domain EYD11_15355 PF03600 Citrate transporter EYD11_15360 PF02742 Iron dependent repressor, metal binding and dimerisation domain EYD11_15360 PF01325 Iron dependent repressor, N-terminal DNA binding domain EYD11_15370 PF00884 Sulfatase EYD11_15375 PF13505 Outer membrane protein beta-barrel domain EYD11_15385 PF00892 EamA-like transporter family EYD11_15390 PF00210 Ferritin-like domain EYD11_15395 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_15400 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15405 PF00005 ABC transporter EYD11_15410 PF00924 Mechanosensitive ion channel EYD11_15415 PF05971 RNA methyltransferase EYD11_15420 PF07338 Protein of unknown function (DUF1471) EYD11_15425 PF07715 TonB-dependent Receptor Plug Domain EYD11_15425 PF00593 TonB dependent receptor EYD11_15430 PF18331 PKHD-type hydroxylase C-terminal domain EYD11_15430 PF13640 2OG-Fe(II) oxygenase superfamily EYD11_15435 PF01258 Prokaryotic dksA/traR C4-type zinc finger EYD11_15440 PF07338 Protein of unknown function (DUF1471) EYD11_15445 PF02615 Malate/L-lactate dehydrogenase EYD11_15450 PF02885 Glycosyl transferase family, helical bundle domain EYD11_15455 PF13307 Helicase C-terminal domain EYD11_15455 PF00270 DEAD/DEAH box helicase EYD11_15455 PF06733 DEAD_2 EYD11_15460 PF08719 Domain of unknown function (DUF1768) EYD11_15465 PF00271 Helicase conserved C-terminal domain EYD11_15465 PF00270 DEAD/DEAH box helicase EYD11_15470 PF00440 Bacterial regulatory proteins, tetR family EYD11_15470 PF09209 Tetracyclin repressor-like, C-terminal domain EYD11_15475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_15480 PF00005 ABC transporter EYD11_15495 PF11076 Putative inner membrane protein YbhQ EYD11_15500 PF03372 Endonuclease/Exonuclease/phosphatase family EYD11_15505 PF13091 PLD-like domain EYD11_15510 PF03706 Lysylphosphatidylglycerol synthase TM region EYD11_15515 PF01027 Inhibitor of apoptosis-promoting Bax1 EYD11_15520 PF01027 Inhibitor of apoptosis-promoting Bax1 EYD11_15525 PF02391 MoaE protein EYD11_15530 PF02597 ThiS family EYD11_15535 PF01967 MoaC family EYD11_15540 PF00994 Probable molybdopterin binding domain EYD11_15545 PF04055 Radical SAM superfamily EYD11_15545 PF06463 Molybdenum Cofactor Synthesis C EYD11_15550 PF01933 Uncharacterised protein family UPF0052 EYD11_15555 PF00271 Helicase conserved C-terminal domain EYD11_15555 PF02151 UvrB/uvrC motif EYD11_15555 PF17757 UvrB interaction domain EYD11_15555 PF04851 Type III restriction enzyme, res subunit EYD11_15555 PF12344 Ultra-violet resistance protein B EYD11_15565 PF08241 Methyltransferase domain EYD11_15570 PF00155 Aminotransferase class I and II EYD11_15575 PF04055 Radical SAM superfamily EYD11_15575 PF06968 Biotin and Thiamin Synthesis associated domain EYD11_15580 PF00202 Aminotransferase class-III EYD11_15585 PF01161 Phosphatidylethanolamine-binding protein EYD11_15590 PF01095 Pectinesterase EYD11_15595 PF00694 Aconitase C-terminal domain EYD11_15595 PF00330 Aconitase family (aconitate hydratase) EYD11_15600 PF00939 Sodium:sulfate symporter transmembrane region EYD11_15605 PF04303 PrpF protein EYD11_15610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_15610 PF03466 LysR substrate binding domain EYD11_15615 PF10282 Lactonase, 7-bladed beta-propeller EYD11_15625 PF00005 ABC transporter EYD11_15625 PF03459 TOBE domain EYD11_15630 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_15640 PF10766 Multidrug efflux pump-associated protein AcrZ EYD11_15645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_15645 PF03459 TOBE domain EYD11_15650 PF00005 ABC transporter EYD11_15655 PF16363 GDP-mannose 4,6 dehydratase EYD11_15660 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EYD11_15660 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EYD11_15665 PF08544 GHMP kinases C terminal EYD11_15665 PF00288 GHMP kinases N terminal domain EYD11_15665 PF10509 Galactokinase galactose-binding signature EYD11_15670 PF01263 Aldose 1-epimerase EYD11_15675 PF00300 Histidine phosphatase superfamily (branch 1) EYD11_15680 PF00793 DAHP synthetase I family EYD11_15685 PF13985 YbgS-like protein EYD11_15690 PF01545 Cation efflux family EYD11_15695 PF04973 Nicotinamide mononucleotide transporter EYD11_15700 PF02445 Quinolinate synthetase A protein EYD11_15745 PF13174 Tetratricopeptide repeat EYD11_15745 PF16331 TolA binding protein trimerisation EYD11_15750 PF00691 OmpA family EYD11_15755 PF04052 TolB amino-terminal domain EYD11_15755 PF07676 WD40-like Beta Propeller Repeat EYD11_15760 PF06519 TolA C-terminal EYD11_15765 PF02472 Biopolymer transport protein ExbD/TolR EYD11_15770 PF01618 MotA/TolQ/ExbB proton channel family EYD11_15775 PF03061 Thioesterase superfamily EYD11_15780 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) EYD11_15785 PF08173 Membrane bound YbgT-like protein EYD11_15790 PF02322 Cytochrome bd terminal oxidase subunit II EYD11_15795 PF01654 Cytochrome bd terminal oxidase subunit I EYD11_15805 PF09261 Alpha mannosidase middle domain EYD11_15805 PF07748 Glycosyl hydrolases family 38 C-terminal domain EYD11_15805 PF01074 Glycosyl hydrolases family 38 N-terminal domain EYD11_15810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_15810 PF02378 Phosphotransferase system, EIIC EYD11_15810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_15815 PF07702 UTRA domain EYD11_15815 PF00392 Bacterial regulatory proteins, gntR family EYD11_15820 PF00549 CoA-ligase EYD11_15820 PF02629 CoA binding domain EYD11_15825 PF00549 CoA-ligase EYD11_15825 PF08442 ATP-grasp domain EYD11_15830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EYD11_15830 PF00364 Biotin-requiring enzyme EYD11_15830 PF02817 e3 binding domain EYD11_15835 PF16078 2-oxoglutarate dehydrogenase N-terminus EYD11_15835 PF00676 Dehydrogenase E1 component EYD11_15835 PF02779 Transketolase, pyrimidine binding domain EYD11_15835 PF16870 2-oxoglutarate dehydrogenase C-terminal EYD11_15840 PF13085 2Fe-2S iron-sulfur cluster binding domain EYD11_15845 PF02910 Fumarate reductase flavoprotein C-term EYD11_15845 PF00890 FAD binding domain EYD11_15850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EYD11_15855 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EYD11_15865 PF00285 Citrate synthase, C-terminal domain EYD11_15870 PF00419 Fimbrial protein EYD11_15875 PF13953 PapC C-terminal domain EYD11_15875 PF13954 PapC N-terminal domain EYD11_15875 PF00577 Outer membrane usher protein EYD11_15880 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_15880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_15885 PF00419 Fimbrial protein EYD11_15890 PF05145 Transition state regulatory protein AbrB EYD11_15895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EYD11_15895 PF06827 Zinc finger found in FPG and IleRS EYD11_15895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EYD11_15900 PF03746 LamB/YcsF family EYD11_15905 PF02626 Carboxyltransferase domain, subdomain A and B EYD11_15910 PF02682 Carboxyltransferase domain, subdomain C and D EYD11_15915 PF01784 NIF3 (NGG1p interacting factor 3) EYD11_15920 PF00854 POT family EYD11_15925 PF00875 DNA photolyase EYD11_15925 PF03441 FAD binding domain of DNA photolyase EYD11_15930 PF08349 Protein of unknown function (DUF1722) EYD11_15965 PF05593 RHS Repeat EYD11_15965 PF03527 RHS protein EYD11_15970 PF10725 Protein of unknown function (DUF2517) EYD11_15975 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) EYD11_15980 PF03814 Potassium-transporting ATPase A subunit EYD11_15990 PF02669 K+-transporting ATPase, c chain EYD11_15995 PF02702 Osmosensitive K+ channel His kinase sensor domain EYD11_15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_15995 PF13493 Domain of unknown function (DUF4118) EYD11_15995 PF13492 GAF domain EYD11_15995 PF00512 His Kinase A (phospho-acceptor) domain EYD11_16000 PF00486 Transcriptional regulatory protein, C terminal EYD11_16000 PF00072 Response regulator receiver domain EYD11_16015 PF13520 Amino acid permease EYD11_16025 PF10946 Protein of unknown function DUF2625 EYD11_16035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYD11_16035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYD11_16035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYD11_16035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYD11_16040 PF03925 SeqA protein C-terminal domain EYD11_16040 PF17206 SeqA protein N-terminal domain EYD11_16045 PF12697 Alpha/beta hydrolase family EYD11_16050 PF01402 Ribbon-helix-helix protein, copG family EYD11_16055 PF00258 Flavodoxin EYD11_16065 PF01475 Ferric uptake regulator family EYD11_16070 PF13982 YbfN-like lipoprotein EYD11_16075 PF03573 outer membrane porin, OprD family EYD11_16080 PF00749 tRNA synthetases class I (E and Q), catalytic domain EYD11_16080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EYD11_16085 PF02378 Phosphotransferase system, EIIC EYD11_16085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EYD11_16085 PF00367 phosphotransferase system, EIIB EYD11_16090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EYD11_16095 PF01979 Amidohydrolase family EYD11_16100 PF00480 ROK family EYD11_16100 PF01047 MarR family EYD11_16105 PF13344 Haloacid dehalogenase-like hydrolase EYD11_16110 PF00733 Asparagine synthase EYD11_16110 PF13537 Glutamine amidotransferase domain EYD11_16150 PF01494 FAD binding domain EYD11_16155 PF04055 Radical SAM superfamily EYD11_16155 PF01938 TRAM domain EYD11_16155 PF00919 Uncharacterized protein family UPF0004 EYD11_16160 PF02562 PhoH-like protein EYD11_16165 PF02130 Uncharacterized protein family UPF0054 EYD11_16170 PF00571 CBS domain EYD11_16170 PF03471 Transporter associated domain EYD11_16175 PF00795 Carbon-nitrogen hydrolase EYD11_16180 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD11_16185 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_16190 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_16195 PF00005 ABC transporter EYD11_16200 PF01156 Inosine-uridine preferring nucleoside hydrolase EYD11_16205 PF00012 Hsp70 protein EYD11_16215 PF06889 Protein of unknown function (DUF1266) EYD11_16220 PF08238 Sel1 repeat EYD11_16230 PF06889 Protein of unknown function (DUF1266) EYD11_16235 PF08238 Sel1 repeat EYD11_16240 PF07295 Zinc-ribbon containing domain EYD11_16245 PF13603 Leucyl-tRNA synthetase, Domain 2 EYD11_16245 PF08264 Anticodon-binding domain of tRNA EYD11_16245 PF00133 tRNA synthetases class I (I, L, M and V) EYD11_16250 PF04390 Lipopolysaccharide-assembly EYD11_16255 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EYD11_16255 PF06144 DNA polymerase III, delta subunit EYD11_16260 PF01467 Cytidylyltransferase-like EYD11_16265 PF00300 Histidine phosphatase superfamily (branch 1) EYD11_16275 PF02590 Predicted SPOUT methyltransferase EYD11_16280 PF00905 Penicillin binding protein transpeptidase domain EYD11_16280 PF03717 Penicillin-binding Protein dimerisation domain EYD11_16285 PF01098 Cell cycle protein EYD11_16290 PF03330 Lytic transglycolase EYD11_16290 PF05036 Sporulation related domain EYD11_16295 PF07943 Penicillin-binding protein 5, C-terminal domain EYD11_16295 PF00768 D-alanyl-D-alanine carboxypeptidase EYD11_16300 PF04359 Protein of unknown function (DUF493) EYD11_16305 PF03099 Biotin/lipoate A/B protein ligase family EYD11_16310 PF03466 LysR substrate binding domain EYD11_16310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_16315 PF04055 Radical SAM superfamily EYD11_16315 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EYD11_16320 PF02416 mttA/Hcf106 family EYD11_16330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EYD11_16335 PF00313 'Cold-shock' DNA-binding domain EYD11_16340 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP EYD11_16345 PF03606 C4-dicarboxylate anaerobic carrier EYD11_16350 PF12431 Transcriptional regulator EYD11_16350 PF00072 Response regulator receiver domain EYD11_16355 PF17203 Single cache domain 3 EYD11_16355 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EYD11_16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_16355 PF00989 PAS fold EYD11_16360 PF08218 Citrate lyase ligase C-terminal domain EYD11_16365 PF06857 Malonate decarboxylase delta subunit (MdcD) EYD11_16370 PF03328 HpcH/HpaI aldolase/citrate lyase family EYD11_16375 PF04223 Citrate lyase, alpha subunit (CitF) EYD11_16380 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase EYD11_16385 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EYD11_16390 PF00939 Sodium:sulfate symporter transmembrane region EYD11_16395 PF00445 Ribonuclease T2 family EYD11_16400 PF14760 Rnk N-terminus EYD11_16400 PF01272 Transcription elongation factor, GreA/GreB, C-term EYD11_16405 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_16405 PF13823 Alcohol dehydrogenase GroES-associated EYD11_16405 PF00107 Zinc-binding dehydrogenase EYD11_16410 PF00582 Universal stress protein family EYD11_16415 PF13192 Thioredoxin domain EYD11_16415 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_16420 PF10417 C-terminal domain of 1-Cys peroxiredoxin EYD11_16420 PF00578 AhpC/TSA family EYD11_16425 PF13098 Thioredoxin-like domain EYD11_16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_16430 PF03466 LysR substrate binding domain EYD11_16435 PF11922 Domain of unknown function (DUF3440) EYD11_16435 PF01507 Phosphoadenosine phosphosulfate reductase family EYD11_16440 PF02195 ParB-like nuclease domain EYD11_16445 PF00155 Aminotransferase class I and II EYD11_16450 PF00465 Iron-containing alcohol dehydrogenase EYD11_16455 PF04328 Selenoprotein, putative EYD11_16460 PF02554 Carbon starvation protein CstA EYD11_16460 PF13722 5TM C-terminal transporter carbon starvation CstA EYD11_16465 PF03061 Thioesterase superfamily EYD11_16475 PF00550 Phosphopantetheine attachment site EYD11_16475 PF00857 Isochorismatase family EYD11_16480 PF13193 AMP-binding enzyme C-terminal domain EYD11_16480 PF00501 AMP-binding enzyme EYD11_16485 PF00425 chorismate binding enzyme EYD11_16490 PF01497 Periplasmic binding protein EYD11_16495 PF05977 Transmembrane secretion effector EYD11_16500 PF01032 FecCD transport family EYD11_16505 PF01032 FecCD transport family EYD11_16510 PF00005 ABC transporter EYD11_16515 PF02706 Chain length determinant protein EYD11_16520 PF00668 Condensation domain EYD11_16520 PF00975 Thioesterase domain EYD11_16520 PF13193 AMP-binding enzyme C-terminal domain EYD11_16520 PF00501 AMP-binding enzyme EYD11_16520 PF00550 Phosphopantetheine attachment site EYD11_16525 PF03621 MbtH-like protein EYD11_16530 PF11806 Domain of unknown function (DUF3327) EYD11_16530 PF00756 Putative esterase EYD11_16535 PF07715 TonB-dependent Receptor Plug Domain EYD11_16535 PF00593 TonB dependent receptor EYD11_16540 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EYD11_16540 PF01648 4'-phosphopantetheinyl transferase superfamily EYD11_16545 PF01609 Transposase DDE domain EYD11_16550 PF01848 Hok/gef family EYD11_16565 PF04107 Glutamate-cysteine ligase family 2(GCS2) EYD11_16590 PF13693 Winged helix-turn-helix DNA-binding EYD11_16595 PF13737 Transposase DDE domain EYD11_16605 PF00534 Glycosyl transferases group 1 EYD11_16610 PF08003 Protein of unknown function (DUF1698) EYD11_16615 PF13477 Glycosyl transferase 4-like EYD11_16615 PF00534 Glycosyl transferases group 1 EYD11_16620 PF00534 Glycosyl transferases group 1 EYD11_16625 PF00005 ABC transporter EYD11_16630 PF01061 ABC-2 type transporter EYD11_16640 PF16363 GDP-mannose 4,6 dehydratase EYD11_16645 PF00483 Nucleotidyl transferase EYD11_16665 PF00881 Nitroreductase family EYD11_16670 PF00924 Mechanosensitive ion channel EYD11_16675 PF00324 Amino acid permease EYD11_16680 PF00873 AcrB/AcrD/AcrF family EYD11_16685 PF00529 HlyD membrane-fusion protein of T1SS EYD11_16685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_16690 PF11604 Copper binding periplasmic protein CusF EYD11_16695 PF02321 Outer membrane efflux protein EYD11_16700 PF00072 Response regulator receiver domain EYD11_16700 PF00486 Transcriptional regulatory protein, C terminal EYD11_16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_16705 PF00672 HAMP domain EYD11_16705 PF00512 His Kinase A (phospho-acceptor) domain EYD11_16710 PF13632 Glycosyl transferase family group 2 EYD11_16710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EYD11_16715 PF13283 Bacteriophage N adsorption protein A C-term EYD11_16720 PF14488 Domain of unknown function (DUF4434) EYD11_16725 PF12833 Helix-turn-helix domain EYD11_16735 PF00196 Bacterial regulatory proteins, luxR family EYD11_16735 PF00072 Response regulator receiver domain EYD11_16740 PF00419 Fimbrial protein EYD11_16745 PF00419 Fimbrial protein EYD11_16750 PF13954 PapC N-terminal domain EYD11_16750 PF13953 PapC C-terminal domain EYD11_16750 PF00577 Outer membrane usher protein EYD11_16755 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_16755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_16760 PF00419 Fimbrial protein EYD11_16765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EYD11_16765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EYD11_16775 PF04307 LexA-binding, inner membrane-associated putative hydrolase EYD11_16780 PF09190 DALR domain EYD11_16780 PF01406 tRNA synthetases class I (C) catalytic domain EYD11_16785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EYD11_16790 PF12850 Calcineurin-like phosphoesterase superfamily domain EYD11_16795 PF00731 AIR carboxylase EYD11_16800 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EYD11_16800 PF02222 ATP-grasp domain EYD11_16805 PF00696 Amino acid kinase family EYD11_16810 PF11392 Protein of unknown function (DUF2877) EYD11_16815 PF06545 Protein of unknown function (DUF1116) EYD11_16820 PF00549 CoA-ligase EYD11_16820 PF02629 CoA binding domain EYD11_16825 PF02615 Malate/L-lactate dehydrogenase EYD11_16830 PF01546 Peptidase family M20/M25/M40 EYD11_16835 PF05899 Protein of unknown function (DUF861) EYD11_16835 PF07883 Cupin domain EYD11_16840 PF02595 Glycerate kinase family EYD11_16845 PF00860 Permease family EYD11_16850 PF01979 Amidohydrolase family EYD11_16855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EYD11_16860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD11_16860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD11_16870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD11_16870 PF00205 Thiamine pyrophosphate enzyme, central domain EYD11_16870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_16875 PF01614 Bacterial transcriptional regulator EYD11_16875 PF09339 IclR helix-turn-helix domain EYD11_16880 PF04115 Ureidoglycolate lyase EYD11_16885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_16885 PF03466 LysR substrate binding domain EYD11_16910 PF15631 NTF2 fold immunity protein EYD11_16915 PF03527 RHS protein EYD11_16915 PF05593 RHS Repeat EYD11_16915 PF14220 Domain of unknown function (DUF4329) EYD11_16925 PF00005 ABC transporter EYD11_16930 PF13472 GDSL-like Lipase/Acylhydrolase family EYD11_16935 PF00106 short chain dehydrogenase EYD11_16940 PF00085 Thioredoxin EYD11_16945 PF03649 Uncharacterised protein family (UPF0014) EYD11_16950 PF00005 ABC transporter EYD11_16955 PF16200 C-terminal region of band_7 EYD11_16955 PF01145 SPFH domain / Band 7 family EYD11_16960 PF01957 NfeD-like C-terminal, partner-binding EYD11_16965 PF13411 MerR HTH family regulatory protein EYD11_16970 PF13520 Amino acid permease EYD11_16975 PF04960 Glutaminase EYD11_16980 PF00403 Heavy-metal-associated domain EYD11_16985 PF01381 Helix-turn-helix EYD11_16995 PF01963 TraB family EYD11_17000 PF04073 Aminoacyl-tRNA editing domain EYD11_17005 PF02872 5'-nucleotidase, C-terminal domain EYD11_17005 PF00149 Calcineurin-like phosphoesterase EYD11_17010 PF07690 Major Facilitator Superfamily EYD11_17015 PF02254 TrkA-N domain EYD11_17015 PF00999 Sodium/hydrogen exchanger family EYD11_17020 PF00294 pfkB family carbohydrate kinase EYD11_17025 PF07859 alpha/beta hydrolase fold EYD11_17030 PF00762 Ferrochelatase EYD11_17035 PF05191 Adenylate kinase, active site lid EYD11_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_17040 PF00183 Hsp90 protein EYD11_17045 PF02132 RecR protein EYD11_17045 PF13662 Toprim domain EYD11_17050 PF02575 YbaB/EbfC DNA-binding family EYD11_17055 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EYD11_17055 PF12169 DNA polymerase III subunits gamma and tau domain III EYD11_17055 PF12170 DNA polymerase III tau subunit V interacting with alpha EYD11_17060 PF00156 Phosphoribosyl transferase domain EYD11_17065 PF04304 Protein of unknown function (DUF454) EYD11_17070 PF07445 Primosomal replication protein priC EYD11_17075 PF10689 Protein of unknown function (DUF2496) EYD11_17080 PF12795 Mechanosensitive ion channel porin domain EYD11_17080 PF12794 Mechanosensitive ion channel inner membrane domain 1 EYD11_17080 PF00924 Mechanosensitive ion channel EYD11_17090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_17090 PF00529 HlyD membrane-fusion protein of T1SS EYD11_17095 PF00873 AcrB/AcrD/AcrF family EYD11_17100 PF10757 Biofilm formation regulator YbaJ EYD11_17105 PF05321 Haemolysin expression modulating protein EYD11_17110 PF14602 Hexapeptide repeat of succinyl-transferase EYD11_17110 PF12464 Maltose acetyltransferase EYD11_17115 PF10777 Inner membrane protein YlaC EYD11_17120 PF00563 EAL domain EYD11_17120 PF12792 CSS motif domain associated with EAL EYD11_17125 PF07237 Protein of unknown function (DUF1428) EYD11_17135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD11_17140 PF09619 Type III secretion system lipoprotein chaperone (YscW) EYD11_17150 PF00909 Ammonium Transporter Family EYD11_17155 PF00543 Nitrogen regulatory protein P-II EYD11_17160 PF00664 ABC transporter transmembrane region EYD11_17160 PF00005 ABC transporter EYD11_17165 PF00664 ABC transporter transmembrane region EYD11_17165 PF00005 ABC transporter EYD11_17170 PF01037 Lrp/AsnC ligand binding domain EYD11_17170 PF13404 AsnC-type helix-turn-helix domain EYD11_17180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_17180 PF12793 Sugar transport-related sRNA regulator N-term EYD11_17185 PF06508 Queuosine biosynthesis protein QueC EYD11_17200 PF13145 PPIC-type PPIASE domain EYD11_17205 PF00216 Bacterial DNA-binding protein EYD11_17210 PF05362 Lon protease (S16) C-terminal proteolytic domain EYD11_17210 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_17210 PF02190 ATP-dependent protease La (LON) substrate-binding domain EYD11_17215 PF07724 AAA domain (Cdc48 subfamily) EYD11_17215 PF06689 ClpX C4-type zinc finger EYD11_17215 PF10431 C-terminal, D2-small domain, of ClpB protein EYD11_17220 PF00574 Clp protease EYD11_17225 PF05698 Bacterial trigger factor protein (TF) C-terminus EYD11_17225 PF05697 Bacterial trigger factor protein (TF) EYD11_17225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYD11_17230 PF01722 BolA-like protein EYD11_17235 PF08139 Prokaryotic membrane lipoprotein lipid attachment site EYD11_17235 PF03923 Uncharacterized lipoprotein EYD11_17240 PF07690 Major Facilitator Superfamily EYD11_17245 PF06481 COX Aromatic Rich Motif EYD11_17245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EYD11_17250 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYD11_17255 PF00510 Cytochrome c oxidase subunit III EYD11_17260 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EYD11_17265 PF01040 UbiA prenyltransferase family EYD11_17270 PF07690 Major Facilitator Superfamily EYD11_17275 PF04461 Protein of unknown function (DUF520) EYD11_17280 PF08546 Ketopantoate reductase PanE/ApbA C terminal EYD11_17280 PF02558 Ketopantoate reductase PanE/ApbA EYD11_17285 PF01965 DJ-1/PfpI family EYD11_17290 PF02568 Thiamine biosynthesis protein (ThiI) EYD11_17290 PF02926 THUMP domain EYD11_17295 PF02609 Exonuclease VII small subunit EYD11_17300 PF00348 Polyprenyl synthetase EYD11_17305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EYD11_17305 PF02779 Transketolase, pyrimidine binding domain EYD11_17305 PF02780 Transketolase, C-terminal domain EYD11_17310 PF00248 Aldo/keto reductase family EYD11_17315 PF04608 Phosphatidylglycerophosphatase A EYD11_17320 PF02769 AIR synthase related protein, C-terminal domain EYD11_17320 PF00586 AIR synthase related protein, N-terminal domain EYD11_17325 PF01029 NusB family EYD11_17330 PF00885 6,7-dimethyl-8-ribityllumazine synthase EYD11_17335 PF01872 RibD C-terminal domain EYD11_17335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EYD11_17340 PF03477 ATP cone domain EYD11_17345 PF11622 Protein of unknown function (DUF3251) EYD11_17350 PF03502 Nucleoside-specific channel-forming protein, Tsx EYD11_17355 PF01844 HNH endonuclease EYD11_17360 PF07549 SecD/SecF GG Motif EYD11_17360 PF02355 Protein export membrane protein EYD11_17365 PF02355 Protein export membrane protein EYD11_17365 PF13721 SecD export protein N-terminal TM region EYD11_17365 PF07549 SecD/SecF GG Motif EYD11_17370 PF02699 Preprotein translocase subunit EYD11_17375 PF01702 Queuine tRNA-ribosyltransferase EYD11_17380 PF02547 Queuosine biosynthesis protein EYD11_17385 PF04336 Acyl carrier protein phosphodiesterase EYD11_17390 PF00128 Alpha amylase, catalytic domain EYD11_17390 PF02903 Alpha amylase, N-terminal ig-like domain EYD11_17395 PF00324 Amino acid permease EYD11_17400 PF05525 Branched-chain amino acid transport protein EYD11_17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_17405 PF11808 Phosphate regulon sensor protein PhoR EYD11_17405 PF00989 PAS fold EYD11_17405 PF00512 His Kinase A (phospho-acceptor) domain EYD11_17410 PF00072 Response regulator receiver domain EYD11_17410 PF00486 Transcriptional regulatory protein, C terminal EYD11_17415 PF12320 Type 5 capsule protein repressor C-terminal domain EYD11_17415 PF00149 Calcineurin-like phosphoesterase EYD11_17420 PF13476 AAA domain EYD11_17425 PF07690 Major Facilitator Superfamily EYD11_17430 PF00480 ROK family EYD11_17435 PF04381 Putative exonuclease, RdgC EYD11_17450 PF06865 Pyrimidine/purine nucleoside phosphorylase EYD11_17455 PF07302 AroM protein EYD11_17460 PF16362 YaiA protein EYD11_17465 PF01202 Shikimate kinase EYD11_17470 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EYD11_17475 PF03807 NADP oxidoreductase coenzyme F420-dependent EYD11_17475 PF14748 Pyrroline-5-carboxylate reductase dimerisation EYD11_17480 PF05230 MASE2 domain EYD11_17480 PF00990 Diguanylate cyclase, GGDEF domain EYD11_17485 PF07769 psiF repeat EYD11_17490 PF00245 Alkaline phosphatase EYD11_17495 PF10796 Sigma-S stabilisation anti-adaptor protein EYD11_17500 PF07478 D-ala D-ala ligase C-terminus EYD11_17500 PF01820 D-ala D-ala ligase N-terminus EYD11_17505 PF10953 Protein of unknown function (DUF2754) EYD11_17510 PF10954 Protein of unknown function (DUF2755) EYD11_17515 PF07759 Protein of unknown function (DUF1615) EYD11_17520 PF05992 SbmA/BacA-like family EYD11_17525 PF00144 Beta-lactamase EYD11_17530 PF15977 Winged helix-turn-helix DNA binding EYD11_17535 PF03212 Pertactin EYD11_17535 PF03797 Autotransporter beta-domain EYD11_17540 PF00490 Delta-aminolevulinic acid dehydratase EYD11_17545 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EYD11_17550 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_17555 PF00005 ABC transporter EYD11_17560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EYD11_17570 PF02585 GlcNAc-PI de-N-acetylase EYD11_17575 PF00535 Glycosyl transferase family 2 EYD11_17580 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_17590 PF01548 Transposase EYD11_17590 PF02371 Transposase IS116/IS110/IS902 family EYD11_17595 PF02583 Metal-sensitive transcriptional repressor EYD11_17600 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_17600 PF00107 Zinc-binding dehydrogenase EYD11_17605 PF00756 Putative esterase EYD11_17610 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EYD11_17615 PF07690 Major Facilitator Superfamily EYD11_17620 PF00682 HMGL-like EYD11_17620 PF07836 DmpG-like communication domain EYD11_17625 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation EYD11_17625 PF01118 Semialdehyde dehydrogenase, NAD binding domain EYD11_17630 PF01557 Fumarylacetoacetate (FAA) hydrolase family EYD11_17635 PF12697 Alpha/beta hydrolase family EYD11_17640 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EYD11_17645 PF01494 FAD binding domain EYD11_17650 PF09339 IclR helix-turn-helix domain EYD11_17650 PF01614 Bacterial transcriptional regulator EYD11_17655 PF00356 Bacterial regulatory proteins, lacI family EYD11_17660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EYD11_17660 PF02929 Beta galactosidase small chain EYD11_17660 PF16353 Domain of unknown function(DUF4981) EYD11_17660 PF02837 Glycosyl hydrolases family 2, sugar binding domain EYD11_17660 PF00703 Glycosyl hydrolases family 2 EYD11_17665 PF01306 LacY proton/sugar symporter EYD11_17670 PF12464 Maltose acetyltransferase EYD11_17670 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_17675 PF07690 Major Facilitator Superfamily EYD11_17680 PF02560 Cyanate lyase C-terminal domain EYD11_17685 PF00484 Carbonic anhydrase EYD11_17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_17690 PF03466 LysR substrate binding domain EYD11_17695 PF07969 Amidohydrolase family EYD11_17700 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EYD11_17705 PF00501 AMP-binding enzyme EYD11_17705 PF16177 Acetyl-coenzyme A synthetase N-terminus EYD11_17705 PF13193 AMP-binding enzyme C-terminal domain EYD11_17710 PF03972 MmgE/PrpD family EYD11_17715 PF00285 Citrate synthase, C-terminal domain EYD11_17725 PF00158 Sigma-54 interaction domain EYD11_17725 PF02954 Bacterial regulatory protein, Fis family EYD11_17725 PF06506 Propionate catabolism activator EYD11_17730 PF07338 Protein of unknown function (DUF1471) EYD11_17735 PF01810 LysE type translocator EYD11_17750 PF00107 Zinc-binding dehydrogenase EYD11_17750 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_17755 PF07969 Amidohydrolase family EYD11_17760 PF00696 Amino acid kinase family EYD11_17770 PF06545 Protein of unknown function (DUF1116) EYD11_17775 PF02629 CoA binding domain EYD11_17775 PF00549 CoA-ligase EYD11_17780 PF11392 Protein of unknown function (DUF2877) EYD11_17785 PF12796 Ankyrin repeats (3 copies) EYD11_17790 PF06496 Protein of unknown function (DUF1097) EYD11_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_17795 PF03466 LysR substrate binding domain EYD11_17800 PF00196 Bacterial regulatory proteins, luxR family EYD11_17800 PF00563 EAL domain EYD11_17810 PF02028 BCCT, betaine/carnitine/choline family transporter EYD11_17815 PF13977 BetI-type transcriptional repressor, C-terminal EYD11_17815 PF00440 Bacterial regulatory proteins, tetR family EYD11_17820 PF00171 Aldehyde dehydrogenase family EYD11_17825 PF00732 GMC oxidoreductase EYD11_17825 PF05199 GMC oxidoreductase EYD11_17835 PF02589 LUD domain EYD11_17840 PF11870 Domain of unknown function (DUF3390) EYD11_17840 PF02589 LUD domain EYD11_17840 PF13183 4Fe-4S dicluster domain EYD11_17845 PF02754 Cysteine-rich domain EYD11_17850 PF12852 Cupin EYD11_17850 PF12833 Helix-turn-helix domain EYD11_17855 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_17855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD11_17860 PF07338 Protein of unknown function (DUF1471) EYD11_17865 PF04224 Protein of unknown function, DUF417 EYD11_17875 PF12833 Helix-turn-helix domain EYD11_17880 PF11924 Inverse autotransporter, beta-domain EYD11_17895 PF01197 Ribosomal protein L31 EYD11_17900 PF00444 Ribosomal protein L36 EYD11_17910 PF00196 Bacterial regulatory proteins, luxR family EYD11_17915 PF16449 Fimbrillin MatB EYD11_17920 PF18649 EcpB C-terminal domain EYD11_17925 PF16967 E-set like domain EYD11_17925 PF15976 CS1-pili formation C-terminal EYD11_17940 PF03692 Putative zinc- or iron-chelating domain EYD11_17945 PF07274 Protein of unknown function (DUF1440) EYD11_17950 PF01799 [2Fe-2S] binding domain EYD11_17950 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD11_17955 PF00941 FAD binding domain in molybdopterin dehydrogenase EYD11_17955 PF03450 CO dehydrogenase flavoprotein C-terminal domain EYD11_17960 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EYD11_17960 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EYD11_17965 PF13478 XdhC Rossmann domain EYD11_17965 PF02625 XdhC and CoxI family EYD11_17970 PF03466 LysR substrate binding domain EYD11_18045 PF14659 Phage integrase, N-terminal SAM-like domain EYD11_18045 PF00589 Phage integrase family EYD11_18045 PF13356 Arm DNA-binding domain EYD11_18055 PF00171 Aldehyde dehydrogenase family EYD11_18060 PF00696 Amino acid kinase family EYD11_18060 PF01472 PUA domain EYD11_18065 PF00267 Gram-negative porin EYD11_18070 PF07417 Sigma factor-binding transcriptional regulator Crl EYD11_18075 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) EYD11_18080 PF00156 Phosphoribosyl transferase domain EYD11_18085 PF07687 Peptidase dimerisation domain EYD11_18085 PF01546 Peptidase family M20/M25/M40 EYD11_18090 PF00472 RF-1 domain EYD11_18100 PF13673 Acetyltransferase (GNAT) domain EYD11_18105 PF13957 Toxin YafO, type II toxin-antitoxin system EYD11_18115 PF11798 IMS family HHH motif EYD11_18115 PF11799 impB/mucB/samB family C-terminal domain EYD11_18115 PF00817 impB/mucB/samB family EYD11_18120 PF00691 OmpA family EYD11_18120 PF13677 Membrane MotB of proton-channel complex MotA/MotB EYD11_18125 PF00771 FHIPEP family EYD11_18135 PF00877 NlpC/P60 family EYD11_18140 PF04221 RelB antitoxin EYD11_18145 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EYD11_18150 PF03734 L,D-transpeptidase catalytic domain EYD11_18155 PF13230 Glutamine amidotransferases class-II EYD11_18160 PF13580 SIS domain EYD11_18165 PF02770 Acyl-CoA dehydrogenase, middle domain EYD11_18165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD11_18165 PF09317 Domain of unknown function (DUF1974) EYD11_18165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD11_18175 PF00795 Carbon-nitrogen hydrolase EYD11_18180 PF01609 Transposase DDE domain EYD11_18180 PF13808 DDE_Tnp_1-associated EYD11_18190 PF14220 Domain of unknown function (DUF4329) EYD11_18190 PF05593 RHS Repeat EYD11_18190 PF03527 RHS protein EYD11_18195 PF04717 Type VI secretion system, phage-baseplate injector EYD11_18200 PF05638 Type VI secretion system effector, Hcp EYD11_18255 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_18255 PF17871 AAA lid domain EYD11_18255 PF07724 AAA domain (Cdc48 subfamily) EYD11_18255 PF10431 C-terminal, D2-small domain, of ClpB protein EYD11_18280 PF05638 Type VI secretion system effector, Hcp EYD11_18305 PF00929 Exonuclease EYD11_18310 PF00075 RNase H EYD11_18315 PF08241 Methyltransferase domain EYD11_18320 PF00753 Metallo-beta-lactamase superfamily EYD11_18320 PF16123 Hydroxyacylglutathione hydrolase C-terminus EYD11_18325 PF01476 LysM domain EYD11_18325 PF01464 Transglycosylase SLT domain EYD11_18330 PF08241 Methyltransferase domain EYD11_18335 PF03372 Endonuclease/Exonuclease/phosphatase family EYD11_18340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_18340 PF03466 LysR substrate binding domain EYD11_18345 PF00248 Aldo/keto reductase family EYD11_18385 PF09383 NIL domain EYD11_18385 PF00005 ABC transporter EYD11_18390 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_18395 PF03180 NLPA lipoprotein EYD11_18400 PF16358 RcsF lipoprotein EYD11_18405 PF18389 TrmO C-terminal domain EYD11_18405 PF01980 tRNA-methyltransferase O EYD11_18410 PF04073 Aminoacyl-tRNA editing domain EYD11_18410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYD11_18410 PF03129 Anticodon binding domain EYD11_18415 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family EYD11_18420 PF04170 NlpE N-terminal domain EYD11_18420 PF17185 NlpE C-terminal OB domain EYD11_18425 PF00472 RF-1 domain EYD11_18430 PF07152 YaeQ protein EYD11_18435 PF06786 Uncharacterised protein family (UPF0253) EYD11_18440 PF07073 Modulator of Rho-dependent transcription termination (ROF) EYD11_18445 PF01171 PP-loop family EYD11_18445 PF09179 TilS substrate binding domain EYD11_18445 PF11734 TilS substrate C-terminal domain EYD11_18450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD11_18460 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EYD11_18465 PF01336 OB-fold nucleic acid binding domain EYD11_18465 PF07733 Bacterial DNA polymerase III alpha NTPase domain EYD11_18465 PF14579 Helix-hairpin-helix motif EYD11_18465 PF02811 PHP domain EYD11_18465 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EYD11_18470 PF01351 Ribonuclease HII EYD11_18475 PF02684 Lipid-A-disaccharide synthetase EYD11_18480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EYD11_18480 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_18485 PF07977 FabA-like domain EYD11_18490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EYD11_18490 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_18495 PF03938 Outer membrane protein (OmpH-like) EYD11_18500 PF01103 Surface antigen EYD11_18500 PF07244 Surface antigen variable number repeat EYD11_18505 PF02163 Peptidase family M50 EYD11_18505 PF17820 PDZ domain EYD11_18515 PF01255 Putative undecaprenyl diphosphate synthase EYD11_18520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EYD11_18520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EYD11_18520 PF13288 DXP reductoisomerase C-terminal domain EYD11_18525 PF01765 Ribosome recycling factor EYD11_18530 PF00696 Amino acid kinase family EYD11_18535 PF00889 Elongation factor TS EYD11_18540 PF00318 Ribosomal protein S2 EYD11_18545 PF00557 Metallopeptidase family M24 EYD11_18550 PF01842 ACT domain EYD11_18550 PF08335 GlnD PII-uridylyltransferase EYD11_18550 PF01909 Nucleotidyltransferase domain EYD11_18550 PF01966 HD domain EYD11_18555 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_18555 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EYD11_18555 PF14602 Hexapeptide repeat of succinyl-transferase EYD11_18560 PF00149 Calcineurin-like phosphoesterase EYD11_18570 PF11944 Protein of unknown function (DUF3461) EYD11_18575 PF05651 Putative sugar diacid recognition EYD11_18575 PF17853 GGDEF-like domain EYD11_18575 PF13556 PucR C-terminal helix-turn-helix domain EYD11_18580 PF00595 PDZ domain EYD11_18585 PF13286 Phosphohydrolase-associated domain EYD11_18585 PF01966 HD domain EYD11_18590 PF01048 Phosphorylase superfamily EYD11_18595 PF01497 Periplasmic binding protein EYD11_18600 PF03458 UPF0126 domain EYD11_18605 PF01521 Iron-sulphur cluster biosynthesis EYD11_18615 PF00654 Voltage gated chloride channel EYD11_18620 PF00202 Aminotransferase class-III EYD11_18625 PF01032 FecCD transport family EYD11_18630 PF01497 Periplasmic binding protein EYD11_18635 PF00005 ABC transporter EYD11_18640 PF07715 TonB-dependent Receptor Plug Domain EYD11_18640 PF00593 TonB dependent receptor EYD11_18645 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal EYD11_18645 PF00905 Penicillin binding protein transpeptidase domain EYD11_18645 PF14814 Bifunctional transglycosylase second domain EYD11_18645 PF00912 Transglycosylase EYD11_18650 PF00270 DEAD/DEAH box helicase EYD11_18650 PF08482 ATP-dependent helicase C-terminal EYD11_18650 PF00271 Helicase conserved C-terminal domain EYD11_18650 PF04408 Helicase associated domain (HA2) EYD11_18655 PF02834 LigT like Phosphoesterase EYD11_18660 PF03749 Sugar fermentation stimulation protein RE domain EYD11_18660 PF17746 SfsA N-terminal OB domain EYD11_18665 PF01258 Prokaryotic dksA/traR C4-type zinc finger EYD11_18670 PF00749 tRNA synthetases class I (E and Q), catalytic domain EYD11_18675 PF01743 Poly A polymerase head domain EYD11_18675 PF12626 Polymerase A arginine-rich C-terminus EYD11_18675 PF12627 Probable RNA and SrmB- binding site of polymerase A EYD11_18680 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EYD11_18685 PF00419 Fimbrial protein EYD11_18690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EYD11_18690 PF02753 Pili assembly chaperone PapD, C-terminal domain EYD11_18695 PF13954 PapC N-terminal domain EYD11_18695 PF13953 PapC C-terminal domain EYD11_18695 PF00577 Outer membrane usher protein EYD11_18700 PF00419 Fimbrial protein EYD11_18705 PF00419 Fimbrial protein EYD11_18710 PF00419 Fimbrial protein EYD11_18715 PF00419 Fimbrial protein EYD11_18720 PF02548 Ketopantoate hydroxymethyltransferase EYD11_18725 PF02569 Pantoate-beta-alanine ligase EYD11_18730 PF04754 Putative transposase, YhgA-like EYD11_18735 PF02261 Aspartate decarboxylase EYD11_18740 PF01522 Polysaccharide deacetylase EYD11_18745 PF03610 PTS system fructose IIA component EYD11_18750 PF01061 ABC-2 type transporter EYD11_18755 PF00005 ABC transporter EYD11_18760 PF00484 Carbonic anhydrase EYD11_18765 PF00156 Phosphoribosyl transferase domain EYD11_18770 PF01011 PQQ enzyme repeat EYD11_18775 PF00394 Multicopper oxidase EYD11_18775 PF07732 Multicopper oxidase EYD11_18775 PF07731 Multicopper oxidase EYD11_18780 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) EYD11_18785 PF17284 Spermidine synthase tetramerisation domain EYD11_18790 PF02675 S-adenosylmethionine decarboxylase EYD11_18795 PF06062 Uncharacterised protein family (UPF0231) EYD11_18800 PF00330 Aconitase family (aconitate hydratase) EYD11_18800 PF11791 Aconitate B N-terminal domain EYD11_18800 PF06434 Aconitate hydratase 2 N-terminus EYD11_18805 PF11737 Protein of unknown function (DUF3300) EYD11_18810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD11_18810 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_18815 PF00364 Biotin-requiring enzyme EYD11_18815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EYD11_18815 PF02817 e3 binding domain EYD11_18820 PF00456 Transketolase, thiamine diphosphate binding domain EYD11_18820 PF17831 Pyruvate dehydrogenase E1 component middle domain EYD11_18825 PF00392 Bacterial regulatory proteins, gntR family EYD11_18825 PF07729 FCD domain EYD11_18830 PF00324 Amino acid permease EYD11_18835 PF17113 Regulatory signalling modulator protein AmpE EYD11_18840 PF01510 N-acetylmuramoyl-L-alanine amidase EYD11_18845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EYD11_18845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EYD11_18850 PF07963 Prokaryotic N-terminal methylation motif EYD11_18855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EYD11_18855 PF00437 Type II/IV secretion system protein EYD11_18860 PF00482 Type II secretion system (T2SS), protein F EYD11_18865 PF00478 IMP dehydrogenase / GMP reductase domain EYD11_18870 PF01121 Dephospho-CoA kinase EYD11_18875 PF07072 Cell division protein EYD11_18880 PF03884 DNA gyrase inhibitor YacG EYD11_18885 PF00293 NUDIX domain EYD11_18890 PF07516 SecA Wing and Scaffold domain EYD11_18890 PF01043 SecA preprotein cross-linking domain EYD11_18890 PF07517 SecA DEAD-like domain EYD11_18890 PF02810 SEC-C motif EYD11_18895 PF06558 Secretion monitor precursor protein (SecM) EYD11_18900 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EYD11_18905 PF12327 FtsZ family, C-terminal domain EYD11_18905 PF00091 Tubulin/FtsZ family, GTPase domain EYD11_18910 PF02491 SHS2 domain inserted in FTSA EYD11_18915 PF08478 POTRA domain, FtsQ-type EYD11_18915 PF03799 Cell division protein FtsQ EYD11_18920 PF07478 D-ala D-ala ligase C-terminus EYD11_18920 PF01820 D-ala D-ala ligase N-terminus EYD11_18925 PF02875 Mur ligase family, glutamate ligase domain EYD11_18925 PF01225 Mur ligase family, catalytic domain EYD11_18925 PF08245 Mur ligase middle domain EYD11_18930 PF04101 Glycosyltransferase family 28 C-terminal domain EYD11_18930 PF03033 Glycosyltransferase family 28 N-terminal domain EYD11_18935 PF01098 Cell cycle protein EYD11_18940 PF08245 Mur ligase middle domain EYD11_18940 PF02875 Mur ligase family, glutamate ligase domain EYD11_18945 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EYD11_18945 PF00953 Glycosyl transferase family 4 EYD11_18950 PF08245 Mur ligase middle domain EYD11_18950 PF02875 Mur ligase family, glutamate ligase domain EYD11_18950 PF01225 Mur ligase family, catalytic domain EYD11_18955 PF01225 Mur ligase family, catalytic domain EYD11_18955 PF08245 Mur ligase middle domain EYD11_18955 PF02875 Mur ligase family, glutamate ligase domain EYD11_18960 PF03717 Penicillin-binding Protein dimerisation domain EYD11_18960 PF00905 Penicillin binding protein transpeptidase domain EYD11_18965 PF04999 Cell division protein FtsL EYD11_18970 PF01795 MraW methylase family EYD11_18975 PF02381 MraZ protein, putative antitoxin-like EYD11_18980 PF00356 Bacterial regulatory proteins, lacI family EYD11_18980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD11_18990 PF10369 Small subunit of acetolactate synthase EYD11_18995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_18995 PF00205 Thiamine pyrophosphate enzyme, central domain EYD11_18995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD11_19005 PF03466 LysR substrate binding domain EYD11_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_19010 PF08054 Leucine operon leader peptide EYD11_19015 PF00682 HMGL-like EYD11_19015 PF08502 LeuA allosteric (dimerisation) domain EYD11_19020 PF00180 Isocitrate/isopropylmalate dehydrogenase EYD11_19025 PF00330 Aconitase family (aconitate hydratase) EYD11_19030 PF00694 Aconitase C-terminal domain EYD11_19035 PF07690 Major Facilitator Superfamily EYD11_19045 PF12793 Sugar transport-related sRNA regulator N-term EYD11_19045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD11_19055 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_19060 PF00005 ABC transporter EYD11_19065 PF09335 SNARE associated Golgi protein EYD11_19070 PF12833 Helix-turn-helix domain EYD11_19070 PF02311 AraC-like ligand binding domain EYD11_19075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_19080 PF02610 L-arabinose isomerase EYD11_19080 PF11762 L-arabinose isomerase C-terminal domain EYD11_19085 PF00596 Class II Aldolase and Adducin N-terminal domain EYD11_19090 PF00136 DNA polymerase family B EYD11_19090 PF03104 DNA polymerase family B, exonuclease domain EYD11_19095 PF18339 RapA N-terminal Tudor like domain 1 EYD11_19095 PF00176 SNF2 family N-terminal domain EYD11_19095 PF00271 Helicase conserved C-terminal domain EYD11_19095 PF12137 RNA polymerase recycling family C-terminal EYD11_19095 PF18337 RapA N-terminal Tudor like domain EYD11_19100 PF00849 RNA pseudouridylate synthase EYD11_19120 PF00226 DnaJ domain EYD11_19120 PF05099 Tellurite resistance protein TerB EYD11_19125 PF03968 OstA-like protein EYD11_19125 PF04453 LPS transport system D EYD11_19130 PF00639 PPIC-type PPIASE domain EYD11_19130 PF09312 SurA N-terminal domain EYD11_19135 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EYD11_19140 PF00398 Ribosomal RNA adenine dimethylase EYD11_19145 PF04379 ApaG domain EYD11_19150 PF00149 Calcineurin-like phosphoesterase EYD11_19155 PF00186 Dihydrofolate reductase EYD11_19160 PF02254 TrkA-N domain EYD11_19160 PF00999 Sodium/hydrogen exchanger family EYD11_19165 PF02525 Flavodoxin-like fold EYD11_19170 PF00083 Sugar (and other) transporter EYD11_19180 PF01494 FAD binding domain EYD11_19185 PF01012 Electron transfer flavoprotein domain EYD11_19185 PF00766 Electron transfer flavoprotein FAD-binding domain EYD11_19190 PF01012 Electron transfer flavoprotein domain EYD11_19195 PF02028 BCCT, betaine/carnitine/choline family transporter EYD11_19200 PF02770 Acyl-CoA dehydrogenase, middle domain EYD11_19200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD11_19200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD11_19205 PF02515 CoA-transferase family III EYD11_19210 PF13193 AMP-binding enzyme C-terminal domain EYD11_19210 PF00501 AMP-binding enzyme EYD11_19215 PF00378 Enoyl-CoA hydratase/isomerase EYD11_19220 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_19225 PF07180 CaiF/GrlA transcriptional regulator EYD11_19230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD11_19230 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EYD11_19230 PF02142 MGS-like domain EYD11_19235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EYD11_19235 PF00117 Glutamine amidotransferase class-I EYD11_19240 PF05173 Dihydrodipicolinate reductase, C-terminus EYD11_19240 PF01113 Dihydrodipicolinate reductase, N-terminus EYD11_19245 PF01156 Inosine-uridine preferring nucleoside hydrolase EYD11_19250 PF02401 LytB protein EYD11_19255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYD11_19260 PF01252 Signal peptidase (SPase) II EYD11_19265 PF00133 tRNA synthetases class I (I, L, M and V) EYD11_19265 PF06827 Zinc finger found in FPG and IleRS EYD11_19265 PF08264 Anticodon-binding domain of tRNA EYD11_19270 PF01687 Riboflavin kinase EYD11_19270 PF06574 FAD synthetase EYD11_19275 PF10837 Protein of unknown function (DUF2575) EYD11_19280 PF01649 Ribosomal protein S20 EYD11_19300 PF03466 LysR substrate binding domain EYD11_19300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_19305 PF06965 Na+/H+ antiporter 1 EYD11_19315 PF01848 Hok/gef family EYD11_19320 PF01609 Transposase DDE domain EYD11_19325 PF01556 DnaJ C terminal domain EYD11_19325 PF00684 DnaJ central domain EYD11_19325 PF00226 DnaJ domain EYD11_19330 PF00012 Hsp70 protein EYD11_19335 PF10807 Protein of unknown function (DUF2541) EYD11_19340 PF13099 Domain of unknown function (DUF3944) EYD11_19340 PF03981 Ubiquinol-cytochrome C chaperone EYD11_19345 PF01184 GPR1/FUN34/yaaH family EYD11_19350 PF00994 Probable molybdopterin binding domain EYD11_19355 PF00923 Transaldolase/Fructose-6-phosphate aldolase EYD11_19360 PF01235 Sodium:alanine symporter family EYD11_19365 PF03883 Peroxide stress protein YaaA EYD11_19370 PF10697 Protein of unknown function (DUF2502) EYD11_19375 PF14821 Threonine synthase N terminus EYD11_19375 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_19380 PF00288 GHMP kinases N terminal domain EYD11_19380 PF08544 GHMP kinases C terminal EYD11_19385 PF01842 ACT domain EYD11_19385 PF00696 Amino acid kinase family EYD11_19385 PF00742 Homoserine dehydrogenase EYD11_19385 PF03447 Homoserine dehydrogenase, NAD binding domain EYD11_19385 PF13840 ACT domain EYD11_19390 PF08254 Threonine leader peptide EYD11_19395 PF00588 SpoU rRNA Methylase family EYD11_19405 PF00486 Transcriptional regulatory protein, C terminal EYD11_19405 PF00072 Response regulator receiver domain EYD11_19410 PF06123 Inner membrane protein CreD EYD11_19415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_19415 PF00512 His Kinase A (phospho-acceptor) domain EYD11_19415 PF00672 HAMP domain EYD11_19420 PF00072 Response regulator receiver domain EYD11_19420 PF00486 Transcriptional regulatory protein, C terminal EYD11_19425 PF05981 CreA protein EYD11_19430 PF12833 Helix-turn-helix domain EYD11_19430 PF06445 GyrI-like small molecule binding domain EYD11_19435 PF00300 Histidine phosphatase superfamily (branch 1) EYD11_19440 PF01931 Protein of unknown function DUF84 EYD11_19445 PF01371 Trp repressor protein EYD11_19450 PF01464 Transglycosylase SLT domain EYD11_19450 PF14718 Soluble lytic murein transglycosylase L domain EYD11_19455 PF00005 ABC transporter EYD11_19455 PF12848 ABC transporter EYD11_19460 PF01381 Helix-turn-helix EYD11_19460 PF13521 AAA domain EYD11_19465 PF18073 Rubredoxin metal binding domain EYD11_19470 PF18429 Domain of unknown function (DUF5609) EYD11_19475 PF10144 Bacterial virulence factor haemolysin EYD11_19480 PF03099 Biotin/lipoate A/B protein ligase family EYD11_19480 PF10437 Bacterial lipoate protein ligase C-terminus EYD11_19485 PF01048 Phosphorylase superfamily EYD11_19490 PF01676 Metalloenzyme superfamily EYD11_19495 PF02885 Glycosyl transferase family, helical bundle domain EYD11_19495 PF00591 Glycosyl transferase family, a/b domain EYD11_19495 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EYD11_19500 PF01791 DeoC/LacD family aldolase EYD11_19505 PF11230 Protein of unknown function (DUF3029) EYD11_19510 PF04055 Radical SAM superfamily EYD11_19515 PF01026 TatD related DNase EYD11_19520 PF01734 Patatin-like phospholipase EYD11_19525 PF07043 Protein of unknown function (DUF1328) EYD11_19530 PF04972 BON domain EYD11_19535 PF16658 Class II release factor RF3, C-terminal domain EYD11_19535 PF00009 Elongation factor Tu GTP binding domain EYD11_19535 PF03144 Elongation factor Tu domain 2 EYD11_19540 PF13419 Haloacid dehalogenase-like hydrolase EYD11_19545 PF00583 Acetyltransferase (GNAT) family EYD11_19550 PF03603 DNA polymerase III psi subunit EYD11_19555 PF05175 Methyltransferase small domain EYD11_19555 PF08468 Methyltransferase small domain N-terminal EYD11_19575 PF07256 Protein of unknown function (DUF1435) EYD11_19580 PF11575 FhuF 2Fe-2S C-terminal domain EYD11_19580 PF06276 Ferric iron reductase FhuF-like transporter EYD11_19585 PF00196 Bacterial regulatory proteins, luxR family EYD11_19590 PF00196 Bacterial regulatory proteins, luxR family EYD11_19595 PF06738 Putative threonine/serine exporter EYD11_19600 PF12821 Threonine/Serine exporter, ThrE EYD11_19605 PF17948 DnaT DNA-binding domain EYD11_19610 PF01695 IstB-like ATP binding protein EYD11_19615 PF10696 Protein of unknown function (DUF2501) EYD11_19620 PF00884 Sulfatase EYD11_19625 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_19625 PF00107 Zinc-binding dehydrogenase EYD11_19630 PF07729 FCD domain EYD11_19630 PF00392 Bacterial regulatory proteins, gntR family EYD11_19635 PF07690 Major Facilitator Superfamily EYD11_19640 PF00672 HAMP domain EYD11_19640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD11_19640 PF02203 Tar ligand binding domain homologue EYD11_19645 PF13722 5TM C-terminal transporter carbon starvation CstA EYD11_19645 PF02554 Carbon starvation protein CstA EYD11_19650 PF04328 Selenoprotein, putative EYD11_19655 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYD11_19655 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD11_19675 PF07690 Major Facilitator Superfamily EYD11_19680 PF04286 Protein of unknown function (DUF445) EYD11_19685 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component EYD11_19690 PF01869 BadF/BadG/BcrA/BcrD ATPase family EYD11_19695 PF11823 Protein of unknown function (DUF3343) EYD11_19700 PF06977 SdiA-regulated EYD11_19705 PF06779 Uncharacterised MFS-type transporter YbfB EYD11_19710 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family EYD11_19715 PF07670 Nucleoside recognition EYD11_19720 PF07670 Nucleoside recognition EYD11_19725 PF01979 Amidohydrolase family EYD11_19730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_19730 PF03466 LysR substrate binding domain EYD11_19735 PF04965 Gene 25-like lysozyme EYD11_19750 PF07729 FCD domain EYD11_19750 PF00392 Bacterial regulatory proteins, gntR family EYD11_19755 PF01232 Mannitol dehydrogenase Rossmann domain EYD11_19755 PF08125 Mannitol dehydrogenase C-terminal domain EYD11_19760 PF03786 D-mannonate dehydratase (UxuA) EYD11_19765 PF02447 GntP family permease EYD11_19770 PF09160 FimH, mannose binding EYD11_19770 PF00419 Fimbrial protein EYD11_19785 PF06178 Oligogalacturonate-specific porin protein (KdgM) EYD11_19795 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase EYD11_19815 PF05717 IS66 Orf2 like protein EYD11_19820 PF03050 Transposase IS66 family EYD11_19820 PF13007 Transposase C of IS166 homeodomain EYD11_19820 PF13817 IS66 C-terminal element EYD11_19820 PF13005 zinc-finger binding domain of transposase IS66 EYD11_19835 PF13737 Transposase DDE domain EYD11_19860 PF04542 Sigma-70 region 2 EYD11_19860 PF08281 Sigma-70, region 4 EYD11_19865 PF04773 FecR protein EYD11_19865 PF16220 Domain of unknown function (DUF4880) EYD11_19870 PF00593 TonB dependent receptor EYD11_19870 PF07660 Secretin and TonB N terminus short domain EYD11_19870 PF07715 TonB-dependent Receptor Plug Domain EYD11_19875 PF01497 Periplasmic binding protein EYD11_19880 PF01032 FecCD transport family EYD11_19885 PF01032 FecCD transport family EYD11_19890 PF00005 ABC transporter EYD11_19905 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EYD11_19920 PF01695 IstB-like ATP binding protein EYD11_19925 PF16925 Tetracyclin repressor-like, C-terminal domain EYD11_19925 PF00440 Bacterial regulatory proteins, tetR family EYD11_19935 PF10011 Predicted membrane protein (DUF2254) EYD11_19945 PF02028 BCCT, betaine/carnitine/choline family transporter EYD11_19950 PF00665 Integrase core domain EYD11_19950 PF13276 HTH-like domain EYD11_19950 PF13333 Integrase core domain EYD11_19955 PF03279 Bacterial lipid A biosynthesis acyltransferase EYD11_19960 PF04393 Protein of unknown function (DUF535) EYD11_19965 PF00534 Glycosyl transferases group 1 EYD11_19965 PF13439 Glycosyltransferase Family 4 EYD11_19970 PF01522 Polysaccharide deacetylase EYD11_19985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EYD11_20000 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EYD11_20065 PF13356 Arm DNA-binding domain EYD11_20065 PF00589 Phage integrase family EYD11_20075 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_20075 PF00107 Zinc-binding dehydrogenase EYD11_20080 PF05872 Bacterial protein of unknown function (DUF853) EYD11_20085 PF03739 Lipopolysaccharide export system permease LptF/LptG EYD11_20090 PF03739 Lipopolysaccharide export system permease LptF/LptG EYD11_20095 PF00883 Cytosol aminopeptidase family, catalytic domain EYD11_20095 PF02789 Cytosol aminopeptidase family, N-terminal domain EYD11_20100 PF04364 DNA polymerase III chi subunit, HolC EYD11_20105 PF10458 Valyl tRNA synthetase tRNA binding arm EYD11_20105 PF00133 tRNA synthetases class I (I, L, M and V) EYD11_20105 PF08264 Anticodon-binding domain of tRNA EYD11_20110 PF05987 Bacterial protein of unknown function (DUF898) EYD11_20115 PF00583 Acetyltransferase (GNAT) family EYD11_20120 PF06877 Regulator of ribonuclease activity B EYD11_20125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EYD11_20125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EYD11_20135 PF04074 YhcH/YjgK/YiaL EYD11_20140 PF00440 Bacterial regulatory proteins, tetR family EYD11_20150 PF01042 Endoribonuclease L-PSP EYD11_20155 PF08052 PyrBI operon leader peptide EYD11_20160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EYD11_20160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EYD11_20165 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain EYD11_20165 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain EYD11_20170 PF01042 Endoribonuclease L-PSP EYD11_20175 PF00690 Cation transporter/ATPase, N-terminus EYD11_20175 PF00689 Cation transporting ATPase, C-terminus EYD11_20180 PF17059 MgtA leader peptide EYD11_20185 PF00356 Bacterial regulatory proteins, lacI family EYD11_20190 PF02378 Phosphotransferase system, EIIC EYD11_20190 PF00367 phosphotransferase system, EIIB EYD11_20195 PF00128 Alpha amylase, catalytic domain EYD11_20195 PF11941 Domain of unknown function (DUF3459) EYD11_20200 PF03477 ATP cone domain EYD11_20200 PF13597 Anaerobic ribonucleoside-triphosphate reductase EYD11_20210 PF07361 Cytochrome b562 EYD11_20215 PF01523 Putative modulator of DNA gyrase EYD11_20220 PF04751 Protein of unknown function (DUF615) EYD11_20225 PF01225 Mur ligase family, catalytic domain EYD11_20225 PF08245 Mur ligase middle domain EYD11_20225 PF02875 Mur ligase family, glutamate ligase domain EYD11_20230 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EYD11_20235 PF02653 Branched-chain amino acid transport system / permease component EYD11_20240 PF02653 Branched-chain amino acid transport system / permease component EYD11_20245 PF00005 ABC transporter EYD11_20250 PF13407 Periplasmic binding protein domain EYD11_20255 PF00719 Inorganic pyrophosphatase EYD11_20260 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EYD11_20265 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EYD11_20270 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like EYD11_20275 PF04357 TamB, inner membrane protein subunit of TAM complex EYD11_20280 PF07244 Surface antigen variable number repeat EYD11_20280 PF01103 Surface antigen EYD11_20280 PF17243 POTRA domain TamA domain 1 EYD11_20285 PF01625 Peptide methionine sulfoxide reductase EYD11_20290 PF03471 Transporter associated domain EYD11_20290 PF01595 Cyclin M transmembrane N-terminal domain EYD11_20290 PF00571 CBS domain EYD11_20295 PF06526 Protein of unknown function (DUF1107) EYD11_20300 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) EYD11_20310 PF00459 Inositol monophosphatase family EYD11_20315 PF02872 5'-nucleotidase, C-terminal domain EYD11_20315 PF00149 Calcineurin-like phosphoesterase EYD11_20320 PF01638 HxlR-like helix-turn-helix EYD11_20325 PF05368 NmrA-like family EYD11_20330 PF00892 EamA-like transporter family EYD11_20335 PF04405 Domain of Unknown function (DUF542) EYD11_20335 PF01814 Hemerythrin HHE cation binding domain EYD11_20340 PF00324 Amino acid permease EYD11_20345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYD11_20345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EYD11_20355 PF04225 Opacity-associated protein A LysM-like domain EYD11_20355 PF08525 Opacity-associated protein A N-terminal motif EYD11_20365 PF12323 Helix-turn-helix domain EYD11_20365 PF07282 Putative transposase DNA-binding domain EYD11_20365 PF01385 Probable transposase EYD11_20370 PF01797 Transposase IS200 like EYD11_20380 PF10887 Protein of unknown function (DUF2686) EYD11_20385 PF01281 Ribosomal protein L9, N-terminal domain EYD11_20385 PF03948 Ribosomal protein L9, C-terminal domain EYD11_20390 PF01084 Ribosomal protein S18 EYD11_20395 PF00436 Single-strand binding protein family EYD11_20400 PF01250 Ribosomal protein S6 EYD11_20405 PF07338 Protein of unknown function (DUF1471) EYD11_20410 PF07274 Protein of unknown function (DUF1440) EYD11_20415 PF00596 Class II Aldolase and Adducin N-terminal domain EYD11_20420 PF01261 Xylose isomerase-like TIM barrel EYD11_20425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EYD11_20430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_20435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_20450 PF00455 DeoR C terminal sensor domain EYD11_20450 PF08220 DeoR-like helix-turn-helix domain EYD11_20455 PF00326 Prolyl oligopeptidase family EYD11_20460 PF07338 Protein of unknown function (DUF1471) EYD11_20465 PF07338 Protein of unknown function (DUF1471) EYD11_20470 PF18158 Adaptive response protein AidB N-terminal domain EYD11_20470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD11_20470 PF02770 Acyl-CoA dehydrogenase, middle domain EYD11_20475 PF03738 Glutathionylspermidine synthase preATP-grasp EYD11_20480 PF06693 Protein of unknown function (DUF1190) EYD11_20485 PF03994 Domain of Unknown Function (DUF350) EYD11_20490 PF10679 Protein of unknown function (DUF2491) EYD11_20505 PF08666 SAF domain EYD11_20505 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EYD11_20510 PF07690 Major Facilitator Superfamily EYD11_20515 PF00701 Dihydrodipicolinate synthetase family EYD11_20520 PF09339 IclR helix-turn-helix domain EYD11_20520 PF01614 Bacterial transcriptional regulator EYD11_20525 PF00588 SpoU rRNA Methylase family EYD11_20525 PF08032 RNA 2'-O ribose methyltransferase substrate binding EYD11_20535 PF08206 Ribonuclease B OB domain EYD11_20535 PF00773 RNB domain EYD11_20535 PF17876 Cold shock domain EYD11_20535 PF08461 Ribonuclease R winged-helix domain EYD11_20535 PF00575 S1 RNA binding domain EYD11_20540 PF02082 Transcriptional regulator EYD11_20545 PF00709 Adenylosuccinate synthetase EYD11_20550 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) EYD11_20555 PF01145 SPFH domain / Band 7 family EYD11_20560 PF12221 Bacterial membrane protein N terminal EYD11_20560 PF01145 SPFH domain / Band 7 family EYD11_20565 PF13167 GTP-binding GTPase N-terminal EYD11_20565 PF16360 GTP-binding GTPase Middle Region EYD11_20565 PF01926 50S ribosome-binding GTPase EYD11_20570 PF17209 Hfq protein EYD11_20580 PF01119 DNA mismatch repair protein, C-terminal domain EYD11_20580 PF08676 MutL C terminal dimerisation domain EYD11_20585 PF01520 N-acetylmuramoyl-L-alanine amidase EYD11_20590 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EYD11_20595 PF01256 Carbohydrate kinase EYD11_20595 PF03853 YjeF-related protein N-terminus EYD11_20600 PF08331 Domain of unknown function (DUF1730) EYD11_20625 PF00929 Exonuclease EYD11_20630 PF03193 RsgA GTPase EYD11_20635 PF02666 Phosphatidylserine decarboxylase EYD11_20640 PF12794 Mechanosensitive ion channel inner membrane domain 1 EYD11_20640 PF12795 Mechanosensitive ion channel porin domain EYD11_20640 PF00924 Mechanosensitive ion channel EYD11_20645 PF10840 Protein of unknown function (DUF2645) EYD11_20655 PF13520 Amino acid permease EYD11_20660 PF00152 tRNA synthetases class II (D, K and N) EYD11_20665 PF00890 FAD binding domain EYD11_20665 PF02910 Fumarate reductase flavoprotein C-term EYD11_20670 PF13085 2Fe-2S iron-sulfur cluster binding domain EYD11_20670 PF13183 4Fe-4S dicluster domain EYD11_20675 PF02300 Fumarate reductase subunit C EYD11_20680 PF02313 Fumarate reductase subunit D EYD11_20685 PF00144 Beta-lactamase EYD11_20690 PF08212 Lipocalin-like domain EYD11_20695 PF00893 Small Multidrug Resistance protein EYD11_20700 PF08085 Entericidin EcnA/B family EYD11_20705 PF08085 Entericidin EcnA/B family EYD11_20710 PF09285 Elongation factor P, C-terminal EYD11_20710 PF08207 Elongation factor P (EF-P) KOW-like domain EYD11_20710 PF01132 Elongation factor P (EF-P) OB domain EYD11_20715 PF04055 Radical SAM superfamily EYD11_20720 PF15922 YjeJ-like EYD11_20725 PF13698 Domain of unknown function (DUF4156) EYD11_20730 PF00118 TCP-1/cpn60 chaperonin family EYD11_20735 PF00166 Chaperonin 10 Kd subunit EYD11_20740 PF13520 Amino acid permease EYD11_20745 PF04186 FxsA cytoplasmic membrane protein EYD11_20750 PF00206 Lyase EYD11_20750 PF10415 Fumarase C C-terminus EYD11_20755 PF03605 Anaerobic c4-dicarboxylate membrane transporter EYD11_20760 PF03091 CutA1 divalent ion tolerance protein EYD11_20765 PF11412 Disulphide bond corrector protein DsbC EYD11_20765 PF02683 Cytochrome C biogenesis protein transmembrane region EYD11_20780 PF18500 CadC C-terminal domain 1 EYD11_20780 PF00486 Transcriptional regulatory protein, C terminal EYD11_20785 PF13520 Amino acid permease EYD11_20790 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EYD11_20790 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EYD11_20790 PF01276 Orn/Lys/Arg decarboxylase, major domain EYD11_20795 PF00854 POT family EYD11_20800 PF00152 tRNA synthetases class II (D, K and N) EYD11_20800 PF01336 OB-fold nucleic acid binding domain EYD11_20805 PF10753 Toxin GhoT_OrtT EYD11_20810 PF11080 Endoribonuclease GhoS EYD11_20815 PF14542 GCN5-related N-acetyl-transferase EYD11_20820 PF06902 Divergent 4Fe-4S mono-cluster EYD11_20825 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EYD11_20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_20825 PF17203 Single cache domain 3 EYD11_20825 PF00989 PAS fold EYD11_20830 PF00072 Response regulator receiver domain EYD11_20835 PF03605 Anaerobic c4-dicarboxylate membrane transporter EYD11_20840 PF05681 Fumarate hydratase (Fumerase) EYD11_20840 PF05683 Fumarase C-terminus EYD11_20845 PF09997 Predicted membrane protein (DUF2238) EYD11_20855 PF11975 Family 4 glycosyl hydrolase C-terminal domain EYD11_20855 PF02056 Family 4 glycosyl hydrolase EYD11_20860 PF12833 Helix-turn-helix domain EYD11_20865 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EYD11_20865 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EYD11_20865 PF01276 Orn/Lys/Arg decarboxylase, major domain EYD11_20870 PF12833 Helix-turn-helix domain EYD11_20875 PF13520 Amino acid permease EYD11_20880 PF00884 Sulfatase EYD11_20880 PF08019 Phosphoethanolamine transferase EptA/EptB EYD11_20885 PF00072 Response regulator receiver domain EYD11_20885 PF00486 Transcriptional regulatory protein, C terminal EYD11_20890 PF00512 His Kinase A (phospho-acceptor) domain EYD11_20890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_20900 PF00083 Sugar (and other) transporter EYD11_20900 PF08946 Osmosensory transporter coiled coil EYD11_20905 PF13990 YjcZ-like protein EYD11_20915 PF08274 PhnA Zinc-Ribbon EYD11_20915 PF03831 PhnA domain EYD11_20920 PF06983 3-demethylubiquinone-9 3-methyltransferase EYD11_20925 PF00005 ABC transporter EYD11_20940 PF07702 UTRA domain EYD11_20940 PF00392 Bacterial regulatory proteins, gntR family EYD11_20945 PF06754 Phosphonate metabolism protein PhnG EYD11_20950 PF05845 Bacterial phosphonate metabolism protein (PhnH) EYD11_20955 PF05861 Bacterial phosphonate metabolism protein (PhnI) EYD11_20960 PF06007 Phosphonate metabolism protein PhnJ EYD11_20965 PF00005 ABC transporter EYD11_20970 PF00005 ABC transporter EYD11_20975 PF07969 Amidohydrolase family EYD11_20985 PF00583 Acetyltransferase (GNAT) family EYD11_20990 PF12706 Beta-lactamase superfamily domain EYD11_21000 PF02502 Ribose/Galactose Isomerase EYD11_21005 PF01380 SIS domain EYD11_21005 PF01418 Helix-turn-helix domain, rpiR family EYD11_21010 PF13407 Periplasmic binding protein domain EYD11_21015 PF00005 ABC transporter EYD11_21020 PF02653 Branched-chain amino acid transport system / permease component EYD11_21025 PF00834 Ribulose-phosphate 3 epimerase family EYD11_21030 PF00480 ROK family EYD11_21035 PF14864 Alkyl sulfatase C-terminal EYD11_21035 PF14863 Alkyl sulfatase dimerisation EYD11_21035 PF00753 Metallo-beta-lactamase superfamily EYD11_21040 PF17090 Uncharacterised protein family EYD11_21045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_21045 PF00529 HlyD membrane-fusion protein of T1SS EYD11_21050 PF04632 Fusaric acid resistance protein family EYD11_21055 PF02321 Outer membrane efflux protein EYD11_21065 PF08238 Sel1 repeat EYD11_21070 PF00375 Sodium:dicarboxylate symporter family EYD11_21080 PF03918 Cytochrome C biogenesis protein EYD11_21085 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EYD11_21085 PF01578 Cytochrome C assembly protein EYD11_21090 PF03916 Polysulphide reductase, NrfD EYD11_21095 PF13247 4Fe-4S dicluster domain EYD11_21095 PF00037 4Fe-4S binding domain EYD11_21100 PF13435 Cytochrome c554 and c-prime EYD11_21100 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) EYD11_21105 PF02335 Cytochrome c552 EYD11_21110 PF13193 AMP-binding enzyme C-terminal domain EYD11_21110 PF00501 AMP-binding enzyme EYD11_21110 PF16177 Acetyl-coenzyme A synthetase N-terminus EYD11_21115 PF04341 Protein of unknown function, DUF485 EYD11_21120 PF00474 Sodium:solute symporter family EYD11_21125 PF00805 Pentapeptide repeats (8 copies) EYD11_21130 PF00999 Sodium/hydrogen exchanger family EYD11_21135 PF00860 Permease family EYD11_21140 PF09278 MerR, DNA binding EYD11_21140 PF00376 MerR family regulatory protein EYD11_21145 PF12833 Helix-turn-helix domain EYD11_21150 PF12792 CSS motif domain associated with EAL EYD11_21150 PF00563 EAL domain EYD11_21155 PF15940 Family of unknown function EYD11_21190 PF02899 Phage integrase, N-terminal SAM-like domain EYD11_21190 PF00589 Phage integrase family EYD11_21195 PF00436 Single-strand binding protein family EYD11_21200 PF00005 ABC transporter EYD11_21200 PF17755 UvrA DNA-binding domain EYD11_21200 PF17760 UvrA interaction domain EYD11_21205 PF04237 YjbR EYD11_21210 PF01894 Uncharacterised protein family UPF0047 EYD11_21215 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EYD11_21225 PF00155 Aminotransferase class I and II EYD11_21230 PF01168 Alanine racemase, N-terminal domain EYD11_21230 PF00842 Alanine racemase, C-terminal domain EYD11_21235 PF00772 DnaB-like helicase N terminal domain EYD11_21235 PF03796 DnaB-like helicase C terminal domain EYD11_21240 PF08240 Alcohol dehydrogenase GroES-like domain EYD11_21240 PF00107 Zinc-binding dehydrogenase EYD11_21245 PF09583 Phage shock protein G (Phageshock_PspG) EYD11_21250 PF01207 Dihydrouridine synthase (Dus) EYD11_21255 PF10897 Protein of unknown function (DUF2713) EYD11_21265 PF01475 Ferric uptake regulator family EYD11_21270 PF05532 CsbD-like EYD11_21275 PF01554 MatE EYD11_21280 PF01726 LexA DNA binding domain EYD11_21280 PF00717 Peptidase S24-like EYD11_21285 PF01219 Prokaryotic diacylglycerol kinase EYD11_21290 PF01553 Acyltransferase EYD11_21295 PF01040 UbiA prenyltransferase family EYD11_21300 PF04345 Chorismate lyase EYD11_21310 PF07148 Maltose operon periplasmic protein precursor (MalM) EYD11_21315 PF02264 LamB porin EYD11_21320 PF00005 ABC transporter EYD11_21320 PF17912 MalK OB fold domain EYD11_21325 PF01547 Bacterial extracellular solute-binding protein EYD11_21350 PF14785 Maltose transport system permease protein MalF P2 domain EYD11_21350 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_21355 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_21360 PF00083 Sugar (and other) transporter EYD11_21365 PF06146 Phosphate-starvation-inducible E EYD11_21370 PF17089 Uncharacterised protein family EYD11_21375 PF06082 Exopolysaccharide biosynthesis protein YbjH EYD11_21380 PF06251 Capsule biosynthesis GfcC EYD11_21385 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF EYD11_21390 PF11106 Exopolysaccharide production protein YjbE EYD11_21395 PF00342 Phosphoglucose isomerase EYD11_21405 PF01842 ACT domain EYD11_21405 PF00696 Amino acid kinase family EYD11_21410 PF11656 YjbD family (DUF3811) EYD11_21415 PF01479 S4 domain EYD11_21415 PF00849 RNA pseudouridylate synthase EYD11_21420 PF03575 Peptidase family S51 EYD11_21425 PF02690 Na+/Pi-cotransporter EYD11_21430 PF02965 Vitamin B12 dependent methionine synthase, activation domain EYD11_21430 PF02607 B12 binding domain EYD11_21430 PF00809 Pterin binding enzyme EYD11_21430 PF02310 B12 binding domain EYD11_21430 PF02574 Homocysteine S-methyltransferase EYD11_21435 PF01614 Bacterial transcriptional regulator EYD11_21435 PF09339 IclR helix-turn-helix domain EYD11_21440 PF07906 ShET2 enterotoxin, N-terminal region EYD11_21445 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EYD11_21450 PF00463 Isocitrate lyase family EYD11_21455 PF01274 Malate synthase EYD11_21460 PF04204 Homoserine O-succinyltransferase EYD11_21465 PF13673 Acetyltransferase (GNAT) domain EYD11_21495 PF01808 AICARFT/IMPCHase bienzyme EYD11_21495 PF02142 MGS-like domain EYD11_21500 PF02844 Phosphoribosylglycinamide synthetase, N domain EYD11_21500 PF02843 Phosphoribosylglycinamide synthetase, C domain EYD11_21500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EYD11_21505 PF00072 Response regulator receiver domain EYD11_21505 PF02954 Bacterial regulatory protein, Fis family EYD11_21505 PF00158 Sigma-54 interaction domain EYD11_21510 PF00512 His Kinase A (phospho-acceptor) domain EYD11_21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_21515 PF13801 Heavy-metal resistance EYD11_21520 PF07356 Protein of unknown function (DUF1481) EYD11_21525 PF00216 Bacterial DNA-binding protein EYD11_21530 PF04222 Protein of unknown function (DUF416) EYD11_21535 PF04493 Endonuclease V EYD11_21540 PF01208 Uroporphyrinogen decarboxylase (URO-D) EYD11_21545 PF00293 NUDIX domain EYD11_21545 PF09297 NADH pyrophosphatase zinc ribbon domain EYD11_21550 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EYD11_21555 PF01964 Radical SAM ThiC family EYD11_21555 PF13667 ThiC-associated domain EYD11_21560 PF02581 Thiamine monophosphate synthase EYD11_21565 PF00899 ThiF family EYD11_21570 PF02597 ThiS family EYD11_21575 PF05690 Thiazole biosynthesis protein ThiG EYD11_21580 PF06968 Biotin and Thiamin Synthesis associated domain EYD11_21580 PF04055 Radical SAM superfamily EYD11_21590 PF04998 RNA polymerase Rpb1, domain 5 EYD11_21590 PF05000 RNA polymerase Rpb1, domain 4 EYD11_21590 PF04997 RNA polymerase Rpb1, domain 1 EYD11_21590 PF04983 RNA polymerase Rpb1, domain 3 EYD11_21590 PF00623 RNA polymerase Rpb1, domain 2 EYD11_21595 PF04561 RNA polymerase Rpb2, domain 2 EYD11_21595 PF04565 RNA polymerase Rpb2, domain 3 EYD11_21595 PF10385 RNA polymerase beta subunit external 1 domain EYD11_21595 PF00562 RNA polymerase Rpb2, domain 6 EYD11_21595 PF04563 RNA polymerase beta subunit EYD11_21595 PF04560 RNA polymerase Rpb2, domain 7 EYD11_21600 PF16320 Ribosomal protein L7/L12 dimerisation domain EYD11_21600 PF00542 Ribosomal protein L7/L12 C-terminal domain EYD11_21605 PF00466 Ribosomal protein L10 EYD11_21610 PF00687 Ribosomal protein L1p/L10e family EYD11_21615 PF00298 Ribosomal protein L11, RNA binding domain EYD11_21615 PF03946 Ribosomal protein L11, N-terminal domain EYD11_21620 PF00467 KOW motif EYD11_21620 PF02357 Transcription termination factor nusG EYD11_21625 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EYD11_21630 PF03144 Elongation factor Tu domain 2 EYD11_21630 PF00009 Elongation factor Tu GTP binding domain EYD11_21630 PF03143 Elongation factor Tu C-terminal domain EYD11_21655 PF00485 Phosphoribulokinase / Uridine kinase family EYD11_21660 PF02237 Biotin protein ligase C terminal domain EYD11_21660 PF03099 Biotin/lipoate A/B protein ligase family EYD11_21660 PF08279 HTH domain EYD11_21665 PF01565 FAD binding domain EYD11_21665 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EYD11_21690 PF01177 Asp/Glu/Hydantoin racemase EYD11_21695 PF07715 TonB-dependent Receptor Plug Domain EYD11_21695 PF00593 TonB dependent receptor EYD11_21700 PF05958 tRNA (Uracil-5-)-methyltransferase EYD11_21705 PF07226 Protein of unknown function (DUF1422) EYD11_21710 PF00440 Bacterial regulatory proteins, tetR family EYD11_21715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD11_21715 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD11_21720 PF03466 LysR substrate binding domain EYD11_21720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_21725 PF14698 Argininosuccinate lyase C-terminal EYD11_21725 PF00206 Lyase EYD11_21730 PF00696 Amino acid kinase family EYD11_21735 PF02774 Semialdehyde dehydrogenase, dimerisation domain EYD11_21735 PF01118 Semialdehyde dehydrogenase, NAD binding domain EYD11_21740 PF01546 Peptidase family M20/M25/M40 EYD11_21740 PF07687 Peptidase dimerisation domain EYD11_21745 PF00311 Phosphoenolpyruvate carboxylase EYD11_21750 PF00884 Sulfatase EYD11_21755 PF12833 Helix-turn-helix domain EYD11_21760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_21765 PF04055 Radical SAM superfamily EYD11_21775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_21785 PF02896 PEP-utilising enzyme, TIM barrel domain EYD11_21785 PF00381 PTS HPr component phosphorylation site EYD11_21785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_21785 PF00391 PEP-utilising enzyme, mobile domain EYD11_21785 PF05524 PEP-utilising enzyme, N-terminal EYD11_21790 PF00923 Transaldolase/Fructose-6-phosphate aldolase EYD11_21795 PF00465 Iron-containing alcohol dehydrogenase EYD11_21800 PF06940 Domain of unknown function (DUF1287) EYD11_21805 PF00892 EamA-like transporter family EYD11_21810 PF00141 Peroxidase EYD11_21815 PF02219 Methylenetetrahydrofolate reductase EYD11_21820 PF00696 Amino acid kinase family EYD11_21820 PF00742 Homoserine dehydrogenase EYD11_21820 PF03447 Homoserine dehydrogenase, NAD binding domain EYD11_21825 PF01053 Cys/Met metabolism PLP-dependent enzyme EYD11_21830 PF01340 Met Apo-repressor, MetJ EYD11_21835 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family EYD11_21840 PF01197 Ribosomal protein L31 EYD11_21845 PF18074 Primosomal protein N C-terminal domain EYD11_21845 PF00270 DEAD/DEAH box helicase EYD11_21845 PF00271 Helicase conserved C-terminal domain EYD11_21845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EYD11_21845 PF17764 3′ DNA-binding domain (3′BD) EYD11_21850 PF00356 Bacterial regulatory proteins, lacI family EYD11_21855 PF05036 Sporulation related domain EYD11_21860 PF00227 Proteasome subunit EYD11_21865 PF10431 C-terminal, D2-small domain, of ClpB protein EYD11_21865 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_21865 PF07724 AAA domain (Cdc48 subfamily) EYD11_21870 PF01040 UbiA prenyltransferase family EYD11_21875 PF03737 Aldolase/RraA EYD11_21880 PF06005 Cell division protein ZapB EYD11_21885 PF00230 Major intrinsic protein EYD11_21890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD11_21890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_21895 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EYD11_21900 PF00970 Oxidoreductase FAD-binding domain EYD11_21900 PF00175 Oxidoreductase NAD-binding domain EYD11_21905 PF00582 Universal stress protein family EYD11_21910 PF04175 Protein of unknown function (DUF406) EYD11_21915 PF05656 Protein of unknown function (DUF805) EYD11_21920 PF07305 Protein of unknown function (DUF1454) EYD11_21925 PF00121 Triosephosphate isomerase EYD11_21930 PF02611 CDP-diacylglycerol pyrophosphatase EYD11_21940 PF00365 Phosphofructokinase EYD11_21945 PF16916 Dimerisation domain of Zinc Transporter EYD11_21945 PF01545 Cation efflux family EYD11_21960 PF04606 Ogr/Delta-like zinc finger EYD11_22000 PF02796 Helix-turn-helix domain of resolvase EYD11_22000 PF00239 Resolvase, N terminal domain EYD11_22005 PF03050 Transposase IS66 family EYD11_22005 PF13007 Transposase C of IS166 homeodomain EYD11_22005 PF13817 IS66 C-terminal element EYD11_22005 PF13005 zinc-finger binding domain of transposase IS66 EYD11_22010 PF05717 IS66 Orf2 like protein EYD11_22025 PF07484 Phage Tail Collar Domain EYD11_22030 PF02413 Caudovirales tail fibre assembly protein, lambda gpK EYD11_22035 PF02413 Caudovirales tail fibre assembly protein, lambda gpK EYD11_22150 PF01695 IstB-like ATP binding protein EYD11_22155 PF00665 Integrase core domain EYD11_22200 PF00589 Phage integrase family EYD11_22200 PF02899 Phage integrase, N-terminal SAM-like domain EYD11_22205 PF07813 LTXXQ motif family protein EYD11_22210 PF00072 Response regulator receiver domain EYD11_22210 PF00486 Transcriptional regulatory protein, C terminal EYD11_22215 PF16527 Two-component sensor protein CpxA, periplasmic domain EYD11_22215 PF00672 HAMP domain EYD11_22215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_22215 PF00512 His Kinase A (phospho-acceptor) domain EYD11_22220 PF03473 MOSC domain EYD11_22220 PF03475 3-alpha domain EYD11_22225 PF03812 2-keto-3-deoxygluconate permease EYD11_22230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EYD11_22230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EYD11_22235 PF06379 L-rhamnose-proton symport protein (RhaT) EYD11_22240 PF12833 Helix-turn-helix domain EYD11_22240 PF02311 AraC-like ligand binding domain EYD11_22245 PF02311 AraC-like ligand binding domain EYD11_22245 PF12833 Helix-turn-helix domain EYD11_22250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD11_22250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD11_22255 PF06134 L-rhamnose isomerase (RhaA) EYD11_22260 PF00596 Class II Aldolase and Adducin N-terminal domain EYD11_22265 PF05336 L-rhamnose mutarotase EYD11_22270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_22275 PF02378 Phosphotransferase system, EIIC EYD11_22275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EYD11_22280 PF05343 M42 glutamyl aminopeptidase EYD11_22285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD11_22285 PF08279 HTH domain EYD11_22290 PF12889 Protein of unknown function (DUF3829) EYD11_22295 PF02634 FdhD/NarQ family EYD11_22300 PF01568 Molydopterin dinucleotide binding domain EYD11_22300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD11_22300 PF00384 Molybdopterin oxidoreductase EYD11_22305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD11_22305 PF01568 Molydopterin dinucleotide binding domain EYD11_22305 PF00384 Molybdopterin oxidoreductase EYD11_22310 PF13247 4Fe-4S dicluster domain EYD11_22310 PF09163 Formate dehydrogenase N, transmembrane EYD11_22315 PF01292 Prokaryotic cytochrome b561 EYD11_22320 PF04216 Protein involved in formate dehydrogenase formation EYD11_22330 PF01402 Ribbon-helix-helix protein, copG family EYD11_22335 PF00583 Acetyltransferase (GNAT) family EYD11_22335 PF09500 Putative thioesterase (yiiD_Cterm) EYD11_22340 PF02580 D-Tyr-tRNA(Tyr) deacylase EYD11_22345 PF03631 Virulence factor BrkB EYD11_22350 PF13419 Haloacid dehalogenase-like hydrolase EYD11_22355 PF00455 DeoR C terminal sensor domain EYD11_22355 PF08220 DeoR-like helix-turn-helix domain EYD11_22360 PF00294 pfkB family carbohydrate kinase EYD11_22365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD11_22365 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD11_22370 PF01791 DeoC/LacD family aldolase EYD11_22380 PF01263 Aldose 1-epimerase EYD11_22385 PF01055 Glycosyl hydrolases family 31 EYD11_22400 PF06178 Oligogalacturonate-specific porin protein (KdgM) EYD11_22405 PF07690 Major Facilitator Superfamily EYD11_22410 PF01261 Xylose isomerase-like TIM barrel EYD11_22415 PF07702 UTRA domain EYD11_22415 PF00392 Bacterial regulatory proteins, gntR family EYD11_22425 PF00120 Glutamine synthetase, catalytic domain EYD11_22425 PF03951 Glutamine synthetase, beta-Grasp domain EYD11_22430 PF00989 PAS fold EYD11_22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD11_22430 PF00512 His Kinase A (phospho-acceptor) domain EYD11_22435 PF02954 Bacterial regulatory protein, Fis family EYD11_22435 PF00072 Response regulator receiver domain EYD11_22435 PF00158 Sigma-54 interaction domain EYD11_22445 PF04055 Radical SAM superfamily EYD11_22445 PF06969 HemN C-terminal domain EYD11_22450 PF04220 Der GTPase activator (YihI) EYD11_22455 PF01926 50S ribosome-binding GTPase EYD11_22460 PF01367 5'-3' exonuclease, C-terminal SAM fold EYD11_22460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EYD11_22460 PF00476 DNA polymerase family A EYD11_22460 PF01612 3'-5' exonuclease EYD11_22470 PF01553 Acyltransferase EYD11_22475 PF06097 Bacterial protein of unknown function (DUF945) EYD11_22480 PF01323 DSBA-like thioredoxin domain EYD11_22485 PF01636 Phosphotransferase enzyme family EYD11_22490 PF06288 Protein of unknown function (DUF1040) EYD11_22495 PF12804 MobA-like NTP transferase domain EYD11_22500 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EYD11_22530 PF12724 Flavodoxin domain EYD11_22535 PF02386 Cation transport protein EYD11_22540 PF01205 Uncharacterized protein family UPF0029 EYD11_22540 PF09186 Domain of unknown function (DUF1949) EYD11_22545 PF00557 Metallopeptidase family M24 EYD11_22550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EYD11_22550 PF00378 Enoyl-CoA hydratase/isomerase EYD11_22550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EYD11_22555 PF00108 Thiolase, N-terminal domain EYD11_22555 PF02803 Thiolase, C-terminal domain EYD11_22560 PF00175 Oxidoreductase NAD-binding domain EYD11_22560 PF00970 Oxidoreductase FAD-binding domain EYD11_22565 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EYD11_22570 PF02357 Transcription termination factor nusG EYD11_22575 PF01026 TatD related DNase EYD11_22580 PF00902 Sec-independent protein translocase protein (TatC) EYD11_22590 PF02416 mttA/Hcf106 family EYD11_22595 PF03109 ABC1 family EYD11_22600 PF02036 SCP-2 sterol transfer family EYD11_22605 PF01209 ubiE/COQ5 methyltransferase family EYD11_22610 PF02646 RmuC family EYD11_22615 PF01048 Phosphorylase superfamily EYD11_22620 PF01738 Dienelactone hydrolase family EYD11_22625 PF08267 Cobalamin-independent synthase, N-terminal domain EYD11_22625 PF01717 Cobalamin-independent synthase, Catalytic domain EYD11_22630 PF03466 LysR substrate binding domain EYD11_22630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_22635 PF00892 EamA-like transporter family EYD11_22645 PF12146 Serine aminopeptidase, S33 EYD11_22650 PF01810 LysE type translocator EYD11_22655 PF01810 LysE type translocator EYD11_22660 PF00270 DEAD/DEAH box helicase EYD11_22660 PF00271 Helicase conserved C-terminal domain EYD11_22660 PF00570 HRDC domain EYD11_22660 PF16124 RecQ zinc-binding EYD11_22660 PF09382 RQC domain EYD11_22665 PF02253 Phospholipase A1 EYD11_22670 PF03061 Thioesterase superfamily EYD11_22675 PF00892 EamA-like transporter family EYD11_22685 PF10947 Protein of unknown function (DUF2628) EYD11_22690 PF01544 CorA-like Mg2+ transporter protein EYD11_22695 PF09992 Phosphodiester glycosidase EYD11_22700 PF00580 UvrD/REP helicase N-terminal domain EYD11_22700 PF13361 UvrD-like helicase C-terminal domain EYD11_22705 PF13419 Haloacid dehalogenase-like hydrolase EYD11_22710 PF00589 Phage integrase family EYD11_22710 PF02899 Phage integrase, N-terminal SAM-like domain EYD11_22715 PF04340 Protein of unknown function, DUF484 EYD11_22720 PF01678 Diaminopimelate epimerase EYD11_22725 PF13627 Prokaryotic lipoprotein-attachment site EYD11_22735 PF01491 Frataxin-like domain EYD11_22740 PF01295 Adenylate cyclase, class-I EYD11_22740 PF12633 Adenylate cyclase NT domain EYD11_22745 PF03900 Porphobilinogen deaminase, C-terminal domain EYD11_22745 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EYD11_22750 PF02602 Uroporphyrinogen-III synthase HemD EYD11_22755 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EYD11_22760 PF07719 Tetratricopeptide repeat EYD11_22760 PF07219 HemY protein N-terminus EYD11_22765 PF00884 Sulfatase EYD11_22770 PF04055 Radical SAM superfamily EYD11_22770 PF13186 Iron-sulfur cluster-binding domain EYD11_22795 PF00324 Amino acid permease EYD11_22800 PF03808 Glycosyl transferase WecB/TagA/CpsF family EYD11_22805 PF06899 WzyE protein, O-antigen assembly polymerase EYD11_22810 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 EYD11_22815 PF01943 Polysaccharide biosynthesis protein EYD11_22820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EYD11_22830 PF00483 Nucleotidyl transferase EYD11_22835 PF16363 GDP-mannose 4,6 dehydratase EYD11_22840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EYD11_22840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EYD11_22840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EYD11_22845 PF02350 UDP-N-acetylglucosamine 2-epimerase EYD11_22850 PF02706 Chain length determinant protein EYD11_22855 PF00953 Glycosyl transferase family 4 EYD11_22860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYD11_22860 PF07497 Rho termination factor, RNA-binding domain EYD11_22860 PF07498 Rho termination factor, N-terminal domain EYD11_22870 PF00085 Thioredoxin EYD11_22875 PF00271 Helicase conserved C-terminal domain EYD11_22875 PF00270 DEAD/DEAH box helicase EYD11_22880 PF02541 Ppx/GppA phosphatase family EYD11_22885 PF00580 UvrD/REP helicase N-terminal domain EYD11_22885 PF13361 UvrD-like helicase C-terminal domain EYD11_22900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EYD11_22900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EYD11_22905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_22905 PF03466 LysR substrate binding domain EYD11_22910 PF00291 Pyridoxal-phosphate dependent enzyme EYD11_22910 PF00585 C-terminal regulatory domain of Threonine dehydratase EYD11_22915 PF00920 Dehydratase family EYD11_22920 PF01063 Amino-transferase class IV EYD11_22930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD11_22930 PF00205 Thiamine pyrophosphate enzyme, central domain EYD11_22930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD11_22940 PF08046 IlvGEDA operon leader peptide EYD11_22945 PF13335 Magnesium chelatase, subunit ChlI C-terminal EYD11_22945 PF01078 Magnesium chelatase, subunit ChlI EYD11_22950 PF04219 Protein of unknown function, DUF EYD11_22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_22955 PF03466 LysR substrate binding domain EYD11_22990 PF07729 FCD domain EYD11_22990 PF00392 Bacterial regulatory proteins, gntR family EYD11_22995 PF07690 Major Facilitator Superfamily EYD11_23000 PF00356 Bacterial regulatory proteins, lacI family EYD11_23005 PF00294 pfkB family carbohydrate kinase EYD11_23010 PF13407 Periplasmic binding protein domain EYD11_23015 PF02653 Branched-chain amino acid transport system / permease component EYD11_23020 PF00005 ABC transporter EYD11_23025 PF05025 RbsD / FucU transport protein family EYD11_23030 PF02705 K+ potassium transporter EYD11_23035 PF17868 AAA lid domain EYD11_23035 PF07728 AAA domain (dynein-related subfamily) EYD11_23035 PF12592 Protein of unknown function (DUF3763) EYD11_23040 PF05762 VWA domain containing CoxE-like protein EYD11_23045 PF03590 Aspartate-ammonia ligase EYD11_23050 PF01037 Lrp/AsnC ligand binding domain EYD11_23055 PF00258 Flavodoxin EYD11_23060 PF13932 GidA associated domain EYD11_23060 PF01134 Glucose inhibited division protein A EYD11_23065 PF02527 rRNA small subunit methyltransferase G EYD11_23070 PF03899 ATP synthase I chain EYD11_23075 PF00119 ATP synthase A chain EYD11_23080 PF00137 ATP synthase subunit C EYD11_23085 PF00430 ATP synthase B/B' CF(0) EYD11_23090 PF00213 ATP synthase delta (OSCP) subunit EYD11_23095 PF02874 ATP synthase alpha/beta family, beta-barrel domain EYD11_23095 PF00306 ATP synthase alpha/beta chain, C terminal domain EYD11_23095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYD11_23100 PF00231 ATP synthase EYD11_23105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYD11_23105 PF02874 ATP synthase alpha/beta family, beta-barrel domain EYD11_23110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EYD11_23110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EYD11_23115 PF12804 MobA-like NTP transferase domain EYD11_23115 PF14602 Hexapeptide repeat of succinyl-transferase EYD11_23115 PF00132 Bacterial transferase hexapeptide (six repeats) EYD11_23120 PF01380 SIS domain EYD11_23125 PF12849 PBP superfamily domain EYD11_23130 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_23135 PF00528 Binding-protein-dependent transport system inner membrane component EYD11_23140 PF00005 ABC transporter EYD11_23145 PF01895 PhoU domain EYD11_23150 PF00874 PRD domain EYD11_23150 PF03123 CAT RNA binding domain EYD11_23155 PF02378 Phosphotransferase system, EIIC EYD11_23155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EYD11_23155 PF00367 phosphotransferase system, EIIB EYD11_23160 PF00232 Glycosyl hydrolase family 1 EYD11_23170 PF00756 Putative esterase EYD11_23170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD11_23175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EYD11_23180 PF03691 Uncharacterised protein family (UPF0167) EYD11_23190 PF05717 IS66 Orf2 like protein EYD11_23195 PF13817 IS66 C-terminal element EYD11_23195 PF13007 Transposase C of IS166 homeodomain EYD11_23195 PF03050 Transposase IS66 family EYD11_23195 PF13005 zinc-finger binding domain of transposase IS66 EYD11_23210 PF13419 Haloacid dehalogenase-like hydrolase EYD11_23215 PF00860 Permease family EYD11_23220 PF03358 NADPH-dependent FMN reductase EYD11_23230 PF03466 LysR substrate binding domain EYD11_23230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_23235 PF07690 Major Facilitator Superfamily EYD11_23240 PF03222 Tryptophan/tyrosine permease family EYD11_23245 PF01212 Beta-eliminating lyase EYD11_23250 PF08053 Tryptophanase operon leader peptide EYD11_23255 PF12631 MnmE helical domain EYD11_23255 PF01926 50S ribosome-binding GTPase EYD11_23255 PF10396 GTP-binding protein TrmE N-terminus EYD11_23260 PF14849 YidC periplasmic domain EYD11_23260 PF02096 60Kd inner membrane protein EYD11_23265 PF01809 Putative membrane protein insertion efficiency factor EYD11_23270 PF00825 Ribonuclease P EYD11_23275 PF00468 Ribosomal protein L34 EYD11_23285 PF01051 Initiator Replication protein EYD11_23300 PF01609 Transposase DDE domain EYD11_23350 PF13614 AAA domain EYD11_23380 PF06406 StbA protein EYD11_23410 PF10502 Signal peptidase, peptidase S26 EYD11_23420 PF06834 TraU protein EYD11_23435 PF13361 UvrD-like helicase C-terminal domain EYD11_23435 PF00580 UvrD/REP helicase N-terminal domain EYD11_23555 PF05321 Haemolysin expression modulating protein EYD11_23575 PF00092 von Willebrand factor type A domain EYD11_23580 PF00092 von Willebrand factor type A domain EYD11_23585 PF02342 TerD domain EYD11_23610 PF15608 PELOTA RNA binding domain EYD11_23610 PF11202 Phosphoribosyl transferase (PRTase) EYD11_23630 PF02342 TerD domain EYD11_23635 PF02342 TerD domain EYD11_23640 PF05099 Tellurite resistance protein TerB EYD11_23645 PF03741 Integral membrane protein TerC family EYD11_23650 PF02342 TerD domain EYD11_23655 PF02342 TerD domain EYD11_23665 PF02342 TerD domain EYD11_23700 PF07804 HipA-like C-terminal domain EYD11_23700 PF13657 HipA N-terminal domain EYD11_23755 PF18284 DNA methylase N-terminal domain EYD11_23755 PF00145 C-5 cytosine-specific DNA methylase EYD11_23760 PF00565 Staphylococcal nuclease homologue EYD11_23820 PF00892 EamA-like transporter family EYD11_23825 PF07690 Major Facilitator Superfamily EYD11_23830 PF00440 Bacterial regulatory proteins, tetR family EYD11_23830 PF02909 Tetracyclin repressor-like, C-terminal domain EYD11_23845 PF13700 Domain of unknown function (DUF4158) EYD11_23845 PF01526 Tn3 transposase DDE domain EYD11_23850 PF00239 Resolvase, N terminal domain EYD11_23850 PF02796 Helix-turn-helix domain of resolvase EYD11_23865 PF12706 Beta-lactamase superfamily domain EYD11_23895 PF13700 Domain of unknown function (DUF4158) EYD11_23895 PF01526 Tn3 transposase DDE domain EYD11_23900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD11_23915 PF00529 HlyD membrane-fusion protein of T1SS EYD11_23915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD11_23920 PF00873 AcrB/AcrD/AcrF family EYD11_23940 PF13091 PLD-like domain EYD11_23960 PF01636 Phosphotransferase enzyme family EYD11_23985 PF13610 DDE domain EYD11_23995 PF03551 Transcriptional regulator PadR-like family EYD11_24015 PF00809 Pterin binding enzyme EYD11_24020 PF00893 Small Multidrug Resistance protein EYD11_24025 PF13427 Domain of unknown function (DUF4111) EYD11_24025 PF01909 Nucleotidyltransferase domain EYD11_24030 PF00186 Dihydrofolate reductase EYD11_24040 PF00589 Phage integrase family EYD11_24040 PF13495 Phage integrase, N-terminal SAM-like domain EYD11_24065 PF01051 Initiator Replication protein EYD11_24095 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EYD11_24105 PF00717 Peptidase S24-like EYD11_24110 PF00817 impB/mucB/samB family EYD11_24110 PF13438 Domain of unknown function (DUF4113) EYD11_24110 PF11799 impB/mucB/samB family C-terminal domain EYD11_24115 PF06965 Na+/H+ antiporter 1 EYD11_24115 PF13462 Thioredoxin EYD11_24135 PF13098 Thioredoxin-like domain EYD11_24135 PF10411 Disulfide bond isomerase protein N-terminus EYD11_24190 PF05598 Transposase domain (DUF772) EYD11_24190 PF01609 Transposase DDE domain EYD11_24255 PF08378 Nuclease-related domain EYD11_24330 PF01848 Hok/gef family EYD11_24495 PF05175 Methyltransferase small domain EYD11_24495 PF17827 PrmC N-terminal domain EYD11_24520 PF01051 Initiator Replication protein EYD11_24555 PF02086 D12 class N6 adenine-specific DNA methyltransferase EYD11_24585 PF00437 Type II/IV secretion system protein EYD11_24595 PF03743 Bacterial conjugation TrbI-like protein EYD11_24625 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EYD11_24695 PF00226 DnaJ domain EYD11_24695 PF00684 DnaJ central domain EYD11_24695 PF01556 DnaJ C terminal domain EYD11_24705 PF01051 Initiator Replication protein EYD11_24735 PF13614 AAA domain EYD11_24740 PF02796 Helix-turn-helix domain of resolvase EYD11_24740 PF00239 Resolvase, N terminal domain EYD11_24745 PF01610 Transposase EYD11_24745 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 EYD11_24745 PF13542 Helix-turn-helix domain of transposase family ISL3 EYD11_24755 PF00717 Peptidase S24-like EYD11_24775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD11_24780 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EYD11_24790 PF00753 Metallo-beta-lactamase superfamily EYD11_24795 PF01609 Transposase DDE domain EYD11_24795 PF05598 Transposase domain (DUF772) EYD11_24800 PF00665 Integrase core domain EYD11_24800 PF13936 Helix-turn-helix domain EYD11_24855 PF00816 H-NS histone family EYD11_24860 PF01131 DNA topoisomerase EYD11_24860 PF01751 Toprim domain EYD11_24865 PF17862 AAA+ lid domain EYD11_24865 PF01434 Peptidase family M41 EYD11_24865 PF06480 FtsH Extracellular EYD11_24865 PF00004 ATPase family associated with various cellular activities (AAA) EYD11_24870 PF00565 Staphylococcal nuclease homologue EYD11_24890 PF08048 Tap RepA1 leader peptide EYD11_24895 PF02387 IncFII RepA protein family EYD11_24905 PF02517 CPBP intramembrane metalloprotease EYD11_24915 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EYD11_24935 PF00186 Dihydrofolate reductase EYD11_24950 PF04986 Putative transposase EYD11_24950 PF14319 Transposase zinc-binding domain EYD11_24965 PF00589 Phage integrase family EYD11_24990 PF07693 KAP family P-loop domain EYD11_24995 PF10137 Predicted nucleotide-binding protein containing TIR-like domain EYD11_25010 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EYD11_25015 PF01850 PIN domain EYD11_25035 PF00005 ABC transporter EYD11_25060 PF01051 Initiator Replication protein EYD11_25075 PF00239 Resolvase, N terminal domain EYD11_25075 PF02796 Helix-turn-helix domain of resolvase EYD11_25110 PF01548 Transposase EYD11_25110 PF02371 Transposase IS116/IS110/IS902 family EYD11_25125 PF00809 Pterin binding enzyme EYD11_25130 PF01636 Phosphotransferase enzyme family EYD11_25135 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase EYD11_25150 PF02909 Tetracyclin repressor-like, C-terminal domain EYD11_25150 PF00440 Bacterial regulatory proteins, tetR family EYD11_25155 PF07690 Major Facilitator Superfamily EYD11_25165 PF03466 LysR substrate binding domain EYD11_25165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD11_25170 PF07690 Major Facilitator Superfamily EYD11_25190 PF02796 Helix-turn-helix domain of resolvase EYD11_25190 PF00239 Resolvase, N terminal domain EYD11_25210 PF02796 Helix-turn-helix domain of resolvase EYD11_25210 PF00239 Resolvase, N terminal domain EYD11_25220 PF07091 Ribosomal RNA methyltransferase (FmrO) EYD11_25240 PF03400 IS1 transposase EYD11_25265 PF10784 Plasmid stability protein EYD11_25270 PF06406 StbA protein EYD11_25285 PF01555 DNA methylase EYD11_25295 PF07128 Protein of unknown function (DUF1380) EYD11_25305 PF07339 Protein of unknown function (DUF1472) EYD11_25310 PF03230 Antirestriction protein EYD11_25315 PF07128 Protein of unknown function (DUF1380) EYD11_25365 PF00436 Single-strand binding protein family EYD11_25370 PF06006 Bacterial protein of unknown function (DUF905) EYD11_25380 PF06290 Plasmid SOS inhibition protein (PsiB) EYD11_25385 PF06952 PsiA protein EYD11_25390 PF01848 Hok/gef family EYD11_25415 PF06067 Domain of unknown function (DUF932) EYD11_25420 PF01464 Transglycosylase SLT domain EYD11_25425 PF05261 TraM protein, DNA-binding EYD11_25430 PF00989 PAS fold EYD11_25435 PF05509 TraY domain EYD11_25440 PF05513 TraA EYD11_25445 PF07178 TraL protein EYD11_25450 PF05309 TraE protein EYD11_25455 PF06586 TraK protein EYD11_25460 PF03743 Bacterial conjugation TrbI-like protein EYD11_25465 PF07296 TraP protein EYD11_25470 PF10894 Protein of unknown function (DUF2689) EYD11_25480 PF09676 Type IV conjugative transfer system lipoprotein (TraV) EYD11_25485 PF01258 Prokaryotic dksA/traR C4-type zinc finger EYD11_25490 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer EYD11_25495 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) EYD11_25500 PF12477 Sex factor F TraW protein N terminal EYD11_25505 PF06834 TraU protein EYD11_25520 PF09673 Type-F conjugative transfer system pilin assembly protein EYD11_25535 PF06986 Type-1V conjugative transfer system mating pair stabilisation EYD11_25540 PF11100 Conjugal transfer protein TrbE EYD11_25545 PF13728 F plasmid transfer operon protein EYD11_25550 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) EYD11_25555 PF13728 F plasmid transfer operon protein EYD11_25570 PF06122 Conjugative relaxosome accessory transposon protein EYD11_25575 PF07916 TraG-like protein, N-terminal region EYD11_25585 PF05818 Enterobacterial TraT complement resistance protein EYD11_25595 PF12615 F sex factor protein N terminal EYD11_25595 PF10412 Type IV secretion-system coupling protein DNA-binding domain EYD11_25600 PF08751 TrwC relaxase EYD11_25600 PF07057 DNA helicase TraI EYD11_25600 PF18272 single-stranded DNA binding TraI N-terminal subdomain EYD11_25600 PF18340 DNA relaxase TraI 2B/2B-like domain EYD11_25605 PF05857 TraX protein EYD11_25610 PF04352 ProQ/FINO family EYD11_25610 PF12602 Fertility inhibition protein N terminal EYD11_25635 PF01848 Hok/gef family EYD11_25640 PF10723 Replication regulatory protein RepB EYD11_25655 PF02387 IncFII RepA protein family EYD11_25685 PF00005 ABC transporter EYD11_25710 PF02796 Helix-turn-helix domain of resolvase EYD11_25710 PF00239 Resolvase, N terminal domain EYD11_25715 PF09217 Restriction endonuclease EcoRII, N-terminal EYD11_25715 PF09019 EcoRII C terminal EYD11_25720 PF00145 C-5 cytosine-specific DNA methylase EYD11_25720 PF18284 DNA methylase N-terminal domain EYD11_25735 PF01909 Nucleotidyltransferase domain EYD11_25735 PF13427 Domain of unknown function (DUF4111) EYD11_25740 PF13495 Phage integrase, N-terminal SAM-like domain EYD11_25740 PF00589 Phage integrase family EYD11_25765 PF00398 Ribosomal RNA adenine dimethylase EYD11_25770 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) EYD11_25830 PF00589 Phage integrase family EYD11_25840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYD11_25845 PF06406 StbA protein EYD11_25855 PF13438 Domain of unknown function (DUF4113) EYD11_25855 PF00817 impB/mucB/samB family EYD11_25855 PF11799 impB/mucB/samB family C-terminal domain EYD11_25860 PF00717 Peptidase S24-like EYD11_25865 PF06183 DinI-like family EYD11_25875 PF18406 Ferredoxin-like domain in Api92-like protein EYD11_25875 PF06924 Protein of unknown function (DUF1281) EYD11_25885 PF01555 DNA methylase EYD11_25895 PF07128 Protein of unknown function (DUF1380) EYD11_25910 PF03230 Antirestriction protein EYD11_25915 PF07128 Protein of unknown function (DUF1380) EYD11_25935 PF00436 Single-strand binding protein family EYD11_25940 PF06006 Bacterial protein of unknown function (DUF905) EYD11_25945 PF02195 ParB-like nuclease domain EYD11_25950 PF06290 Plasmid SOS inhibition protein (PsiB) EYD11_25955 PF06952 PsiA protein EYD11_25965 PF07339 Protein of unknown function (DUF1472) EYD11_25995 PF04754 Putative transposase, YhgA-like EYD11_26030 PF03432 Relaxase/Mobilisation nuclease domain EYD11_26040 PF00436 Single-strand binding protein family EYD11_26060 PF01751 Toprim domain EYD11_26060 PF01131 DNA topoisomerase EYD11_26105 PF13091 PLD-like domain EYD11_26155 PF00437 Type II/IV secretion system protein EYD11_26185 PF00589 Phage integrase family EYD11_26190 PF04917 Bacterial shufflon protein, N-terminal constant region EYD11_26195 PF04917 Bacterial shufflon protein, N-terminal constant region EYD11_26200 PF04917 Bacterial shufflon protein, N-terminal constant region EYD11_26205 PF04917 Bacterial shufflon protein, N-terminal constant region EYD11_26210 PF04917 Bacterial shufflon protein, N-terminal constant region EYD11_26220 PF01464 Transglycosylase SLT domain EYD11_26235 PF00437 Type II/IV secretion system protein EYD11_26345 PF01815 Rop protein EYD11_26410 PF01076 Plasmid recombination enzyme