RN84_00015	SM00838	Elongation factor G C-terminus
RN84_00015	SM00889	Elongation factor G, domain IV
RN84_00050	SM00463	Small MutS-related domain
RN84_00130	SM00840	RN84_00130
RN84_00140	SM00463	Small MutS-related domain
RN84_00140	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RN84_00140	SM00534	ATPase domain of DNA mismatch repair MUTS family
RN84_00165	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RN84_00200	SM00900	RN84_00200
RN84_00255	SM00788	Adenylosuccinate synthetase
RN84_00290	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_00300	SM00382	ATPases associated with a variety of cellular activities
RN84_00395	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RN84_00400	SM01374	RN84_00400
RN84_00420	SM00322	K homology RNA-binding domain
RN84_00435	SM01382	RN84_00435
RN84_00435	SM01383	RN84_00435
RN84_00455	SM01403	RN84_00455
RN84_00465	SM00382	ATPases associated with a variety of cellular activities
RN84_00470	SM00382	ATPases associated with a variety of cellular activities
RN84_00525	SM00487	DEAD-like helicases superfamily
RN84_00525	SM00490	helicase superfamily c-terminal domain
RN84_00645	SM00858	RN84_00645
RN84_00755	SM00316	Ribosomal protein S1-like RNA-binding domain
RN84_00755	SM00322	K homology RNA-binding domain
RN84_00805	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RN84_00805	SM00292	breast cancer carboxy-terminal domain
RN84_00805	SM00532	Ligase N family
RN84_00810	SM00957	SecA DEAD-like domain
RN84_00810	SM00958	SecA preprotein cross-linking domain
RN84_00825	SM01228	RN84_00825
RN84_00885	SM00382	ATPases associated with a variety of cellular activities
RN84_00925	SM00876	Biotin and Thiamin Synthesis associated domain
RN84_00980	SM01192	RN84_00980
RN84_00980	SM01193	RN84_00980
RN84_01050	SM00316	Ribosomal protein S1-like RNA-binding domain
RN84_01060	SM00842	Cell division protein FtsA
RN84_01125	SM00382	ATPases associated with a variety of cellular activities
RN84_01190	SM00382	ATPases associated with a variety of cellular activities
RN84_01230	SM00382	ATPases associated with a variety of cellular activities
RN84_01290	SM00271	DnaJ molecular chaperone homology domain
RN84_01405	SM00797	Allophanate hydrolase subunit 2
RN84_01470	SM00877	RN84_01470
RN84_01475	SM00877	RN84_01475
RN84_01480	SM00877	RN84_01480
RN84_01505	SM00448	cheY-homologous receiver domain
RN84_01505	SM01012	RN84_01505
RN84_01515	SM00877	RN84_01515
RN84_01525	SM00905	Dihydroneopterin aldolase
RN84_01555	SM00387	Histidine kinase-like ATPases
RN84_01560	SM00316	Ribosomal protein S1-like RNA-binding domain
RN84_01560	SM00732	Likely ribonuclease with RNase H fold.
RN84_01600	SM00478	endonuclease III
RN84_01600	SM00525	RN84_01600
RN84_01630	SM00900	RN84_01630
RN84_01665	SM00830	Chorismate mutase type II
RN84_01690	SM00493	RN84_01690
RN84_01785	SM00363	S4 RNA-binding domain
RN84_01790	SM00487	DEAD-like helicases superfamily
RN84_01790	SM00490	helicase superfamily c-terminal domain
RN84_01790	SM00982	RN84_01790
RN84_01790	SM01058	CarD-like/TRCF domain
RN84_01850	SM01228	RN84_01850
RN84_01860	SM00393	Putative single-stranded nucleic acids-binding domain
RN84_01860	SM01245	RN84_01860
RN84_01870	SM01234	RN84_01870
RN84_01905	SM00387	Histidine kinase-like ATPases
RN84_01905	SM00433	TopoisomeraseII
RN84_01910	SM00434	DNA Topoisomerase IV
RN84_01925	SM00873	B3/4 domain
RN84_01925	SM00874	tRNA synthetase B5 domain
RN84_01925	SM00896	Ferredoxin-fold anticodon binding domain
RN84_02025	SM00382	ATPases associated with a variety of cellular activities
RN84_02140	SM00382	ATPases associated with a variety of cellular activities
RN84_02155	SM00530	Helix-turn-helix XRE-family like proteins 
RN84_02200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RN84_02215	SM00530	Helix-turn-helix XRE-family like proteins 
RN84_02255	SM00869	Autotransporter beta-domain
RN84_02300	SM00869	Autotransporter beta-domain
RN84_02325	SM00244	prohibitin homologues
RN84_02340	SM00838	Elongation factor G C-terminus
RN84_02340	SM00889	Elongation factor G, domain IV
RN84_02400	SM00893	Electron transfer flavoprotein domain
RN84_02405	SM00893	Electron transfer flavoprotein domain
RN84_02440	SM00382	ATPases associated with a variety of cellular activities
RN84_02445	SM00382	ATPases associated with a variety of cellular activities
RN84_02470	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RN84_02555	SM00382	ATPases associated with a variety of cellular activities
RN84_02560	SM00382	ATPases associated with a variety of cellular activities
RN84_02620	SM00116	Domain in cystathionine beta-synthase and other proteins.
RN84_02620	SM01091	Transporter associated domain
RN84_02630	SM00028	Tetratricopeptide repeats
RN84_02640	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RN84_02640	SM00954	Region found in RelA / SpoT proteins
RN84_02650	SM00116	Domain in cystathionine beta-synthase and other proteins.
RN84_02650	SM00924	MgtE intracellular N domain
RN84_02675	SM01130	RN84_02675
RN84_02695	SM00354	helix_turn _helix lactose operon repressor
RN84_02710	SM00903	Flavin reductase like domain
RN84_02735	SM00861	Transketolase, pyrimidine binding domain
RN84_02745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RN84_02795	SM00842	Cell division protein FtsA
RN84_02800	SM00864	Tubulin/FtsZ family, GTPase domain
RN84_02800	SM00865	Tubulin/FtsZ family, C-terminal domain
RN84_02810	SM00869	Autotransporter beta-domain
RN84_02855	SM00901	RN84_02855
RN84_02885	SM00420	helix_turn_helix, Deoxyribose operon repressor
RN84_02885	SM01134	RN84_02885
RN84_02910	SM00028	Tetratricopeptide repeats
RN84_02935	SM00382	ATPases associated with a variety of cellular activities
RN84_02940	SM00382	ATPases associated with a variety of cellular activities
RN84_02950	SM00869	Autotransporter beta-domain
RN84_02955	SM01011	Aminopeptidase P, N-terminal domain
RN84_02975	SM00849	Metallo-beta-lactamase superfamily
RN84_02985	SM00890	Domain of unknown function
RN84_03000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RN84_03005	SM01007	Class II Aldolase and Adducin N-terminal domain
RN84_03010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RN84_03050	SM01221	RN84_03050
RN84_03050	SM01222	RN84_03050
RN84_03085	SM00028	Tetratricopeptide repeats
RN84_03085	SM01043	Bacterial transcriptional activator domain
RN84_03115	SM00382	ATPases associated with a variety of cellular activities
RN84_03115	SM00962	SRP54-type protein, GTPase domain
RN84_03115	SM00963	SRP54-type protein, helical bundle domain
RN84_03150	SM00487	DEAD-like helicases superfamily
RN84_03150	SM00490	helicase superfamily c-terminal domain
RN84_03165	SM00481	DNA polymerase alpha chain like domain
RN84_03220	SM00363	S4 RNA-binding domain
RN84_03265	SM00382	ATPases associated with a variety of cellular activities
RN84_03270	SM00382	ATPases associated with a variety of cellular activities
RN84_03315	SM00382	ATPases associated with a variety of cellular activities
RN84_03320	SM00900	RN84_03320
RN84_03335	SM00382	ATPases associated with a variety of cellular activities
RN84_03375	SM00937	RN84_03375
RN84_03445	SM00530	Helix-turn-helix XRE-family like proteins 
RN84_03510	SM00479	RN84_03510
RN84_03525	SM00493	RN84_03525
RN84_03740	SM01323	RN84_03740
RN84_03745	SM00646	RN84_03745
RN84_03755	SM00937	RN84_03755
RN84_03815	SM00448	cheY-homologous receiver domain
RN84_03825	SM00400	zinc finger
RN84_03825	SM00493	RN84_03825
RN84_03915	SM00382	ATPases associated with a variety of cellular activities
RN84_03975	SM00316	Ribosomal protein S1-like RNA-binding domain
RN84_03995	SM00363	S4 RNA-binding domain
RN84_03995	SM01390	RN84_03995
RN84_04000	SM00662	RNA polymerases D
RN84_04010	SM00645	Papain family cysteine protease
RN84_04015	SM00477	DNA/RNA non-specific endonuclease
RN84_04015	SM00892	DNA/RNA non-specific endonuclease
RN84_04020	SM00849	Metallo-beta-lactamase superfamily
RN84_04080	SM00028	Tetratricopeptide repeats
RN84_04110	SM00448	cheY-homologous receiver domain
RN84_04110	SM00862	Transcriptional regulatory protein, C terminal
RN84_04115	SM00387	Histidine kinase-like ATPases
RN84_04115	SM00388	His Kinase A (phosphoacceptor) domain
RN84_04120	SM00986	Uracil DNA glycosylase superfamily
RN84_04120	SM00987	UreE urease accessory protein, C-terminal domain 
RN84_04240	SM00248	ankyrin repeats
RN84_04260	SM00116	Domain in cystathionine beta-synthase and other proteins.
RN84_04260	SM01240	RN84_04260
RN84_04280	SM00986	Uracil DNA glycosylase superfamily
RN84_04280	SM00987	UreE urease accessory protein, C-terminal domain 
RN84_04325	SM00382	ATPases associated with a variety of cellular activities
RN84_04340	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_04360	SM00849	Metallo-beta-lactamase superfamily
RN84_04365	SM01103	RN84_04365
RN84_04370	SM00861	Transketolase, pyrimidine binding domain
RN84_04385	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RN84_04385	SM00245	tail specific protease
RN84_04470	SM00062	Bacterial periplasmic substrate-binding proteins
RN84_04470	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RN84_04510	SM00487	DEAD-like helicases superfamily
RN84_04550	SM00890	Domain of unknown function
RN84_04570	SM00382	ATPases associated with a variety of cellular activities
RN84_04590	SM00849	Metallo-beta-lactamase superfamily
RN84_04600	SM00487	DEAD-like helicases superfamily
RN84_04600	SM00490	helicase superfamily c-terminal domain
RN84_04620	SM00487	DEAD-like helicases superfamily
RN84_04620	SM00490	helicase superfamily c-terminal domain
RN84_04625	SM00740	RN84_04625
RN84_04690	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_04720	SM00382	ATPases associated with a variety of cellular activities
RN84_04755	SM00968	SMC proteins Flexible Hinge Domain
RN84_04790	SM00563	Phosphate acyltransferases
RN84_04850	SM00382	ATPases associated with a variety of cellular activities
RN84_04855	SM00382	ATPases associated with a variety of cellular activities
RN84_04940	SM00331	Sigma factor PP2C-like phosphatases
RN84_04945	SM00465	GIY-YIG type nucleases (URI domain)
RN84_04995	SM00382	ATPases associated with a variety of cellular activities
RN84_05025	SM00382	ATPases associated with a variety of cellular activities
RN84_05025	SM00962	SRP54-type protein, GTPase domain
RN84_05025	SM00963	SRP54-type protein, helical bundle domain
RN84_05050	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RN84_05050	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RN84_05050	SM00493	RN84_05050
RN84_05060	SM00028	Tetratricopeptide repeats
RN84_05100	SM00773	Proposed nucleic acid binding domain
RN84_05190	SM00316	Ribosomal protein S1-like RNA-binding domain
RN84_05235	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RN84_05270	SM00363	S4 RNA-binding domain
RN84_05280	SM00411	bacterial (prokaryotic) histone like domain
RN84_05290	SM00831	Cation transporter/ATPase, N-terminus
RN84_05405	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_05405	SM00876	Biotin and Thiamin Synthesis associated domain
RN84_05455	SM01211	RN84_05455
RN84_05460	SM01001	AIR carboxylase
RN84_05495	SM00798	AICARFT/IMPCHase bienzyme
RN84_05495	SM00851	MGS-like domain
RN84_05500	SM01209	RN84_05500
RN84_05500	SM01210	RN84_05500
RN84_05710	SM00448	cheY-homologous receiver domain
RN84_05715	SM00387	Histidine kinase-like ATPases
RN84_05795	SM00954	Region found in RelA / SpoT proteins
RN84_05810	SM00155	Phospholipase D. Active site motifs.
RN84_05865	SM00855	Phosphoglycerate mutase family
RN84_05910	SM00116	Domain in cystathionine beta-synthase and other proteins.
RN84_05925	SM00849	Metallo-beta-lactamase superfamily
RN84_05970	SM00476	deoxyribonuclease I
RN84_05975	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
RN84_06010	SM00382	ATPases associated with a variety of cellular activities
RN84_06020	SM00382	ATPases associated with a variety of cellular activities
RN84_06055	SM00450	Rhodanese Homology Domain
RN84_06070	SM00563	Phosphate acyltransferases
RN84_06120	SM00642	Alpha-amylase domain
RN84_06160	SM00028	Tetratricopeptide repeats
RN84_06195	SM00886	Stress responsive A/B Barrel Domain
RN84_06240	SM00382	ATPases associated with a variety of cellular activities
RN84_06280	SM00028	Tetratricopeptide repeats
RN84_06285	SM00411	bacterial (prokaryotic) histone like domain
RN84_06305	SM00882	Coenzyme A transferase
RN84_06325	SM00487	DEAD-like helicases superfamily
RN84_06345	SM00855	Phosphoglycerate mutase family
RN84_06365	SM00382	ATPases associated with a variety of cellular activities
RN84_06375	SM00900	RN84_06375
RN84_06385	SM00382	ATPases associated with a variety of cellular activities
RN84_06420	SM00382	ATPases associated with a variety of cellular activities
RN84_06425	SM00062	Bacterial periplasmic substrate-binding proteins
RN84_06425	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RN84_06430	SM00642	Alpha-amylase domain
RN84_06450	SM00116	Domain in cystathionine beta-synthase and other proteins.
RN84_06490	SM00893	Electron transfer flavoprotein domain
RN84_06495	SM00893	Electron transfer flavoprotein domain
RN84_06530	SM00838	Elongation factor G C-terminus
RN84_06560	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_06565	SM00382	ATPases associated with a variety of cellular activities
RN84_06630	SM00363	S4 RNA-binding domain
RN84_06645	SM00845	GatB domain
RN84_06655	SM00870	RN84_06655
RN84_06700	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RN84_06710	SM00487	DEAD-like helicases superfamily
RN84_06710	SM00488	RN84_06710
RN84_06710	SM00491	RN84_06710
RN84_06720	SM01221	RN84_06720
RN84_06720	SM01222	RN84_06720
RN84_06755	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_06780	SM00855	Phosphoglycerate mutase family
RN84_06820	SM00255	Toll - interleukin 1 - resistance
RN84_06820	SM00320	WD40 repeats
RN84_06830	SM00841	Elongation factor P, C-terminal
RN84_06830	SM01185	RN84_06830
RN84_06845	SM00363	S4 RNA-binding domain
RN84_06895	SM00904	Riboflavin kinase
RN84_06905	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RN84_06905	SM00475	5'-3' exonuclease
RN84_06905	SM00482	DNA polymerase A domain
RN84_06935	SM00732	Likely ribonuclease with RNase H fold.
RN84_06940	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RN84_06950	SM00382	ATPases associated with a variety of cellular activities
RN84_06960	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RN84_06960	SM00534	ATPase domain of DNA mismatch repair MUTS family
RN84_07020	SM00347	helix_turn_helix multiple antibiotic resistance protein
RN84_07035	SM00740	RN84_07035
RN84_07045	SM00883	Chaperonin 10 Kd subunit
RN84_07080	SM00382	ATPases associated with a variety of cellular activities
RN84_07135	SM00382	ATPases associated with a variety of cellular activities
RN84_07135	SM00930	RN84_07135
RN84_07155	SM00900	RN84_07155
RN84_07160	SM00900	RN84_07160
RN84_07175	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RN84_07200	SM01043	Bacterial transcriptional activator domain
RN84_07325	SM00478	endonuclease III
RN84_07350	SM00480	DNA polymerase III beta subunit
RN84_07360	SM00382	ATPases associated with a variety of cellular activities
RN84_07365	SM00382	ATPases associated with a variety of cellular activities
RN84_07380	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RN84_07395	SM00357	Cold shock protein domain
RN84_07395	SM00955	RN84_07395
RN84_07400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RN84_07450	SM00382	ATPases associated with a variety of cellular activities
RN84_07510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RN84_07510	SM00387	Histidine kinase-like ATPases
RN84_07510	SM00388	His Kinase A (phosphoacceptor) domain
RN84_07515	SM00448	cheY-homologous receiver domain
RN84_07515	SM00862	Transcriptional regulatory protein, C terminal
RN84_07530	SM00382	ATPases associated with a variety of cellular activities
RN84_07550	SM01359	RN84_07550
RN84_07550	SM01360	RN84_07550
RN84_07555	SM00341	Helicase and RNase D C-terminal
RN84_07555	SM00487	DEAD-like helicases superfamily
RN84_07555	SM00490	helicase superfamily c-terminal domain
RN84_07555	SM00956	RN84_07555
RN84_07565	SM00327	von Willebrand factor (vWF) type A domain
RN84_07620	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_07650	SM00530	Helix-turn-helix XRE-family like proteins 
RN84_07665	SM01119	RN84_07665
RN84_07690	SM00382	ATPases associated with a variety of cellular activities
RN84_07740	SM01207	RN84_07740
RN84_07745	SM00480	DNA polymerase III beta subunit
RN84_07780	SM00849	Metallo-beta-lactamase superfamily
RN84_07855	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RN84_07860	SM00357	Cold shock protein domain
RN84_07885	SM00836	DALR anticodon binding domain
RN84_07885	SM01016	Arginyl tRNA synthetase N terminal dom
RN84_07940	SM00287	Bacterial SH3 domain homologues
RN84_07950	SM00822	RN84_07950
RN84_07965	SM01005	Alanine racemase, C-terminal domain
RN84_07980	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
RN84_08025	SM00257	Lysin motif
RN84_08030	SM00357	Cold shock protein domain
RN84_08030	SM00382	ATPases associated with a variety of cellular activities
RN84_08035	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_08100	SM00853	MutL C terminal dimerisation domain
RN84_08100	SM01340	RN84_08100
RN84_08110	SM01004	Delta-aminolevulinic acid dehydratase
RN84_08180	SM00796	Allophanate hydrolase subunit 1
RN84_08185	SM00797	Allophanate hydrolase subunit 2
RN84_08220	SM00797	Allophanate hydrolase subunit 2
RN84_08225	SM00796	Allophanate hydrolase subunit 1
RN84_08260	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RN84_08285	SM00851	MGS-like domain
RN84_08285	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RN84_08290	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RN84_08310	SM00487	DEAD-like helicases superfamily
RN84_08345	SM00487	DEAD-like helicases superfamily
RN84_08345	SM00490	helicase superfamily c-terminal domain
RN84_08355	SM00493	RN84_08355
RN84_08385	SM01005	Alanine racemase, C-terminal domain
RN84_08415	SM00382	ATPases associated with a variety of cellular activities
RN84_08420	SM00382	ATPases associated with a variety of cellular activities
RN84_08455	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_08480	SM00869	Autotransporter beta-domain
RN84_08530	SM00382	ATPases associated with a variety of cellular activities
RN84_08565	SM00998	Adenylosuccinate lyase C-terminus
RN84_08615	SM00382	ATPases associated with a variety of cellular activities
RN84_08815	SM00764	Citrate lyase ligase C-terminal domain
RN84_08830	SM00966	SpoVT / AbrB like domain 
RN84_08870	SM00342	helix_turn_helix, arabinose operon control protein
RN84_08870	SM00871	Bacterial transcription activator, effector binding domain
RN84_08895	SM00382	ATPases associated with a variety of cellular activities
RN84_08910	SM00382	ATPases associated with a variety of cellular activities
RN84_08935	SM00382	ATPases associated with a variety of cellular activities
RN84_08960	SM00382	ATPases associated with a variety of cellular activities
RN84_08980	SM00861	Transketolase, pyrimidine binding domain
RN84_09000	SM00650	Ribosomal RNA adenine dimethylases
RN84_09030	SM00479	RN84_09030
RN84_09030	SM00481	DNA polymerase alpha chain like domain
RN84_09065	SM00882	Coenzyme A transferase
RN84_09070	SM00882	Coenzyme A transferase
RN84_09090	SM00382	ATPases associated with a variety of cellular activities
RN84_09130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RN84_09155	SM00869	Autotransporter beta-domain
RN84_09190	SM00530	Helix-turn-helix XRE-family like proteins 
RN84_09265	SM00382	ATPases associated with a variety of cellular activities
RN84_09290	SM00420	helix_turn_helix, Deoxyribose operon repressor
RN84_09290	SM01134	RN84_09290
RN84_09310	SM00487	DEAD-like helicases superfamily
RN84_09310	SM00490	helicase superfamily c-terminal domain
RN84_09335	SM00448	cheY-homologous receiver domain
RN84_09335	SM00850	LytTr DNA-binding domain
RN84_09345	SM00419	helix_turn_helix, cAMP Regulatory protein
RN84_09415	SM00882	Coenzyme A transferase
RN84_09420	SM00882	Coenzyme A transferase
RN84_09455	SM00382	ATPases associated with a variety of cellular activities
RN84_09485	SM00342	helix_turn_helix, arabinose operon control protein
RN84_09485	SM00448	cheY-homologous receiver domain
RN84_09540	SM00248	ankyrin repeats
RN84_09545	SM00248	ankyrin repeats
RN84_09580	SM00363	S4 RNA-binding domain
RN84_09620	SM00644	RN84_09620
RN84_09640	SM00382	ATPases associated with a variety of cellular activities
RN84_09660	SM00729	Elongator protein 3, MiaB family, Radical SAM
RN84_09665	SM00358	Double-stranded RNA binding motif
RN84_09665	SM00535	Ribonuclease III family
RN84_09670	SM00825	Beta-ketoacyl synthase
RN84_09675	SM00823	Phosphopantetheine attachment site
RN84_09680	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RN84_09715	SM00382	ATPases associated with a variety of cellular activities
RN84_09720	SM00382	ATPases associated with a variety of cellular activities
RN84_09735	SM00116	Domain in cystathionine beta-synthase and other proteins.
RN84_09735	SM01131	RN84_09735
RN84_09765	SM00382	ATPases associated with a variety of cellular activities
RN84_09770	SM00382	ATPases associated with a variety of cellular activities
RN84_09795	SM00028	Tetratricopeptide repeats
RN84_09820	SM01120	RN84_09820
RN84_09855	SM00849	Metallo-beta-lactamase superfamily
RN84_09895	SM00882	Coenzyme A transferase
RN84_09900	SM00882	Coenzyme A transferase
RN84_09935	SM00534	ATPase domain of DNA mismatch repair MUTS family
RN84_10080	SM00047	Lysozyme subfamily 2
RN84_10100	SM00382	ATPases associated with a variety of cellular activities
RN84_10115	SM00100	Cyclic nucleotide-monophosphate binding domain
RN84_10125	SM00450	Rhodanese Homology Domain
RN84_10135	SM00869	Autotransporter beta-domain
RN84_10160	SM00935	Outer membrane protein (OmpH-like)
RN84_10175	SM00322	K homology RNA-binding domain
RN84_10175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RN84_10185	SM00387	Histidine kinase-like ATPases
RN84_10240	SM00116	Domain in cystathionine beta-synthase and other proteins.
RN84_10245	SM01120	RN84_10245
RN84_10245	SM01121	RN84_10245
RN84_10250	SM00530	Helix-turn-helix XRE-family like proteins 
RN84_10255	SM00852	Probable molybdopterin binding domain
RN84_10325	SM00382	ATPases associated with a variety of cellular activities
RN84_10325	SM01086	C-terminal, D2-small domain, of ClpB protein
RN84_10360	SM01011	Aminopeptidase P, N-terminal domain
RN84_10365	SM00869	Autotransporter beta-domain
RN84_10370	SM00506	Appr-1"-p processing enzyme
RN84_10430	SM00028	Tetratricopeptide repeats
RN84_10435	SM00028	Tetratricopeptide repeats
RN84_10450	SM00382	ATPases associated with a variety of cellular activities
RN84_10480	SM00487	DEAD-like helicases superfamily
RN84_10480	SM00490	helicase superfamily c-terminal domain
RN84_10485	SM00487	DEAD-like helicases superfamily
RN84_10485	SM00490	helicase superfamily c-terminal domain
RN84_10495	SM00977	TilS substrate C-terminal domain
RN84_10500	SM00382	ATPases associated with a variety of cellular activities
RN84_10505	SM01387	RN84_10505
RN84_10540	SM01324	RN84_10540
RN84_10545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RN84_10560	SM00271	DnaJ molecular chaperone homology domain
RN84_10570	SM01400	RN84_10570
RN84_10595	SM00530	Helix-turn-helix XRE-family like proteins 
RN84_10620	SM00382	ATPases associated with a variety of cellular activities
RN84_10625	SM00382	ATPases associated with a variety of cellular activities
RN84_10640	SM00382	ATPases associated with a variety of cellular activities
RN84_10650	SM00347	helix_turn_helix multiple antibiotic resistance protein
RN84_10685	SM00382	ATPases associated with a variety of cellular activities
RN84_10685	SM00464	Found in ATP-dependent protease La (LON)
RN84_10690	SM00382	ATPases associated with a variety of cellular activities
RN84_10690	SM00994	ClpX C4-type zinc finger
RN84_10690	SM01086	C-terminal, D2-small domain, of ClpB protein
RN84_10725	SM00316	Ribosomal protein S1-like RNA-binding domain
RN84_10755	SM00797	Allophanate hydrolase subunit 2
RN84_10760	SM00796	Allophanate hydrolase subunit 1
RN84_10790	SM01409	RN84_10790
RN84_10795	SM00072	Guanylate kinase homologues.
RN84_10810	SM00663	RNA polymerase I subunit A N-terminus
RN84_10835	SM00649	Ribosomal protein L11/L12
RN84_10840	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RN84_10840	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
