locus-tag class description BV122_1 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BV122_1 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BV122_10 PF04216 Protein involved in formate dehydrogenase formation BV122_100 PF02447 GntP family permease BV122_1006 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BV122_1006 PF06827 Zinc finger found in FPG and IleRS BV122_1006 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BV122_1008 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BV122_1009 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BV122_101 PF13649 Methyltransferase domain BV122_1010 PF02592 Putative vitamin uptake transporter BV122_1011 PF01243 Pyridoxamine 5'-phosphate oxidase BV122_1011 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BV122_1013 PF06002 Alpha-2,3-sialyltransferase (CST-I) BV122_1015 PF03951 Glutamine synthetase, beta-Grasp domain BV122_1015 PF00120 Glutamine synthetase, catalytic domain BV122_1016 PF16363 GDP-mannose 4,6 dehydratase BV122_1017 PF00883 Cytosol aminopeptidase family, catalytic domain BV122_1017 PF12404 Peptidase BV122_1018 PF00334 Nucleoside diphosphate kinase BV122_1019 PF01018 GTP1/OBG BV122_1019 PF01926 50S ribosome-binding GTPase BV122_1020 PF00892 EamA-like transporter family BV122_1021 PF01016 Ribosomal L27 protein BV122_1022 PF00829 Ribosomal prokaryotic L21 protein BV122_1024 PF00348 Polyprenyl synthetase BV122_1025 PF02677 Epoxyqueuosine reductase QueH BV122_1026 PF01235 Sodium:alanine symporter family BV122_1027 PF00486 Transcriptional regulatory protein, C terminal BV122_1027 PF00072 Response regulator receiver domain BV122_1028 PF00085 Thioredoxin BV122_1028 PF02683 Cytochrome C biogenesis protein transmembrane region BV122_1028 PF11412 Disulphide bond corrector protein DsbC BV122_1029 PF07681 DoxX BV122_103 PF01547 Bacterial extracellular solute-binding protein BV122_1030 PF01808 AICARFT/IMPCHase bienzyme BV122_1030 PF02142 MGS-like domain BV122_1031 PF02844 Phosphoribosylglycinamide synthetase, N domain BV122_1031 PF02843 Phosphoribosylglycinamide synthetase, C domain BV122_1031 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BV122_1033 PF00464 Serine hydroxymethyltransferase BV122_1034 PF01121 Dephospho-CoA kinase BV122_1035 PF03884 DNA gyrase inhibitor YacG BV122_1036 PF00271 Helicase conserved C-terminal domain BV122_1036 PF00270 DEAD/DEAH box helicase BV122_1037 PF00440 Bacterial regulatory proteins, tetR family BV122_1038 PF00440 Bacterial regulatory proteins, tetR family BV122_1039 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BV122_104 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1040 PF00873 AcrB/AcrD/AcrF family BV122_1041 PF05036 Sporulation related domain BV122_1042 PF07690 Major Facilitator Superfamily BV122_1043 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BV122_1043 PF00529 HlyD membrane-fusion protein of T1SS BV122_1045 PF00186 Dihydrofolate reductase BV122_1046 PF01472 PUA domain BV122_1046 PF00696 Amino acid kinase family BV122_1047 PF00293 NUDIX domain BV122_1048 PF01925 Sulfite exporter TauE/SafE BV122_1049 PF01790 Prolipoprotein diacylglyceryl transferase BV122_105 PF00005 ABC transporter BV122_1050 PF00303 Thymidylate synthase BV122_1051 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BV122_1052 PF05258 Dna[CI] antecedent, DciA BV122_1053 PF10818 Protein of unknown function (DUF2547) BV122_1054 PF01043 SecA preprotein cross-linking domain BV122_1054 PF07517 SecA DEAD-like domain BV122_1054 PF02810 SEC-C motif BV122_1054 PF07516 SecA Wing and Scaffold domain BV122_1055 PF00293 NUDIX domain BV122_1056 PF00999 Sodium/hydrogen exchanger family BV122_1056 PF02254 TrkA-N domain BV122_1057 PF08241 Methyltransferase domain BV122_1058 PF00318 Ribosomal protein S2 BV122_1059 PF00889 Elongation factor TS BV122_106 PF02557 D-alanyl-D-alanine carboxypeptidase BV122_1060 PF00132 Bacterial transferase hexapeptide (six repeats) BV122_1060 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BV122_1061 PF03938 Outer membrane protein (OmpH-like) BV122_1062 PF07244 Surface antigen variable number repeat BV122_1062 PF01103 Surface antigen BV122_1063 PF02163 Peptidase family M50 BV122_1065 PF01255 Putative undecaprenyl diphosphate synthase BV122_1067 PF13603 Leucyl-tRNA synthetase, Domain 2 BV122_1067 PF00133 tRNA synthetases class I (I, L, M and V) BV122_1067 PF08264 Anticodon-binding domain of tRNA BV122_1068 PF04390 Lipopolysaccharide-assembly BV122_1069 PF06144 DNA polymerase III, delta subunit BV122_1069 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BV122_107 PF01546 Peptidase family M20/M25/M40 BV122_107 PF07687 Peptidase dimerisation domain BV122_1071 PF02092 Glycyl-tRNA synthetase beta subunit BV122_1071 PF05746 DALR anticodon binding domain BV122_1072 PF04480 Protein of unknown function (DUF559) BV122_1074 PF02091 Glycyl-tRNA synthetase alpha subunit BV122_1075 PF06628 Catalase-related immune-responsive BV122_1075 PF00199 Catalase BV122_1076 PF03738 Glutathionylspermidine synthase preATP-grasp BV122_1078 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) BV122_1079 PF00113 Enolase, C-terminal TIM barrel domain BV122_1079 PF03952 Enolase, N-terminal domain BV122_108 PF03960 ArsC family BV122_1081 PF03918 Cytochrome C biogenesis protein BV122_1082 PF08534 Redoxin BV122_1083 PF01578 Cytochrome C assembly protein BV122_1083 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BV122_1084 PF00459 Inositol monophosphatase family BV122_1085 PF07963 Prokaryotic N-terminal methylation motif BV122_1087 PF10833 Protein of unknown function (DUF2572) BV122_1088 PF17344 Family of unknown function (DUF5374) BV122_1089 PF17946 RecC C-terminal domain BV122_109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BV122_109 PF00183 Hsp90 protein BV122_1090 PF03477 ATP cone domain BV122_1091 PF01872 RibD C-terminal domain BV122_1091 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BV122_1092 PF13180 PDZ domain BV122_1093 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BV122_1093 PF06827 Zinc finger found in FPG and IleRS BV122_1093 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BV122_1094 PF00282 Pyridoxal-dependent decarboxylase conserved domain BV122_1095 PF01850 PIN domain BV122_1096 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BV122_1097 PF00202 Aminotransferase class-III BV122_1098 PF00471 Ribosomal protein L33 BV122_1099 PF00830 Ribosomal L28 family BV122_11 PF00583 Acetyltransferase (GNAT) family BV122_110 PF01784 NIF3 (NGG1p interacting factor 3) BV122_1100 PF04002 RadC-like JAB domain BV122_1101 PF02441 Flavoprotein BV122_1101 PF04127 DNA / pantothenate metabolism flavoprotein BV122_1102 PF00692 dUTPase BV122_1103 PF00440 Bacterial regulatory proteins, tetR family BV122_1104 PF06794 Uncharacterised protein family (UPF0270) BV122_1105 PF13545 Crp-like helix-turn-helix domain BV122_1105 PF00027 Cyclic nucleotide-binding domain BV122_1106 PF05958 tRNA (Uracil-5-)-methyltransferase BV122_1107 PF00933 Glycosyl hydrolase family 3 N terminal domain BV122_1108 PF07233 Protein of unknown function (DUF1425) BV122_1109 PF01230 HIT domain BV122_111 PF02384 N-6 DNA Methylase BV122_1110 PF00133 tRNA synthetases class I (I, L, M and V) BV122_1110 PF06827 Zinc finger found in FPG and IleRS BV122_1110 PF08264 Anticodon-binding domain of tRNA BV122_1111 PF01687 Riboflavin kinase BV122_1111 PF06574 FAD synthetase BV122_1112 PF03023 Lipid II flippase MurJ BV122_1113 PF01649 Ribosomal protein S20 BV122_1114 PF17311 Family of unknown function (DUF5358) BV122_1115 PF00378 Enoyl-CoA hydratase/isomerase BV122_1116 PF13378 Enolase C-terminal domain-like BV122_1117 PF01220 Dehydroquinase class II BV122_1118 PF00364 Biotin-requiring enzyme BV122_1119 PF02785 Biotin carboxylase C-terminal domain BV122_1119 PF00289 Biotin carboxylase, N-terminal domain BV122_1119 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BV122_1120 PF06196 Protein of unknown function (DUF997) BV122_1121 PF00474 Sodium:solute symporter family BV122_1122 PF00892 EamA-like transporter family BV122_1123 PF02661 Fic/DOC family BV122_1125 PF01207 Dihydrouridine synthase (Dus) BV122_1126 PF02954 Bacterial regulatory protein, Fis family BV122_1127 PF01668 SmpB protein BV122_1128 PF00365 Phosphofructokinase BV122_1130 PF03883 Peroxide stress protein YaaA BV122_1131 PF17782 DprA winged helix domain BV122_1131 PF02481 DNA recombination-mediator protein A BV122_1132 PF00682 HMGL-like BV122_1132 PF08502 LeuA allosteric (dimerisation) domain BV122_1133 PF00180 Isocitrate/isopropylmalate dehydrogenase BV122_1134 PF00330 Aconitase family (aconitate hydratase) BV122_1135 PF00694 Aconitase C-terminal domain BV122_1136 PF03212 Pertactin BV122_1136 PF03797 Autotransporter beta-domain BV122_1136 PF02395 Immunoglobulin A1 protease BV122_1137 PF02463 RecF/RecN/SMC N terminal domain BV122_1138 PF02768 DNA polymerase III beta subunit, C-terminal domain BV122_1138 PF02767 DNA polymerase III beta subunit, central domain BV122_1138 PF00712 DNA polymerase III beta subunit, N-terminal domain BV122_1139 PF11638 DnaA N-terminal domain BV122_1139 PF08299 Bacterial dnaA protein helix-turn-helix BV122_1139 PF00308 Bacterial dnaA protein BV122_1140 PF00593 TonB dependent receptor BV122_1140 PF07715 TonB-dependent Receptor Plug Domain BV122_1141 PF17484 N-Lobe handle Tf-binding protein B BV122_1141 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B BV122_1141 PF17483 C-lobe handle domain of Tf-binding protein B BV122_1143 PF00468 Ribosomal protein L34 BV122_1144 PF00825 Ribonuclease P BV122_1145 PF01809 Putative membrane protein insertion efficiency factor BV122_1146 PF02096 60Kd inner membrane protein BV122_1146 PF14849 YidC periplasmic domain BV122_1147 PF12631 MnmE helical domain BV122_1147 PF01926 50S ribosome-binding GTPase BV122_1147 PF10396 GTP-binding protein TrmE N-terminus BV122_1148 PF13145 PPIC-type PPIASE domain BV122_1149 PF00884 Sulfatase BV122_115 PF00448 SRP54-type protein, GTPase domain BV122_115 PF02881 SRP54-type protein, helical bundle domain BV122_115 PF02978 Signal peptide binding domain BV122_1150 PF01252 Signal peptidase (SPase) II BV122_1151 PF02401 LytB protein BV122_1154 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1155 PF00005 ABC transporter BV122_1156 PF06968 Biotin and Thiamin Synthesis associated domain BV122_1156 PF04055 Radical SAM superfamily BV122_1157 PF02780 Transketolase, C-terminal domain BV122_1157 PF00456 Transketolase, thiamine diphosphate binding domain BV122_1157 PF02779 Transketolase, pyrimidine binding domain BV122_1158 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BV122_1159 PF00596 Class II Aldolase and Adducin N-terminal domain BV122_1160 PF01261 Xylose isomerase-like TIM barrel BV122_1161 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BV122_1161 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BV122_1162 PF03480 Bacterial extracellular solute-binding protein, family 7 BV122_1163 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BV122_1164 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BV122_1165 PF02615 Malate/L-lactate dehydrogenase BV122_1166 PF01614 Bacterial transcriptional regulator BV122_1166 PF09339 IclR helix-turn-helix domain BV122_1167 PF18429 Domain of unknown function (DUF5609) BV122_1168 PF04461 Protein of unknown function (DUF520) BV122_1169 PF01544 CorA-like Mg2+ transporter protein BV122_117 PF03471 Transporter associated domain BV122_117 PF00571 CBS domain BV122_117 PF01595 Cyclin M transmembrane N-terminal domain BV122_1170 PF02325 YGGT family BV122_1171 PF13230 Glutamine amidotransferases class-II BV122_1172 PF13173 AAA domain BV122_1172 PF13635 Domain of unknown function (DUF4143) BV122_1175 PF02310 B12 binding domain BV122_1175 PF02607 B12 binding domain BV122_1175 PF02965 Vitamin B12 dependent methionine synthase, activation domain BV122_1176 PF02965 Vitamin B12 dependent methionine synthase, activation domain BV122_1176 PF02310 B12 binding domain BV122_1176 PF02607 B12 binding domain BV122_1177 PF12838 4Fe-4S dicluster domain BV122_1177 PF00037 4Fe-4S binding domain BV122_1178 PF02613 Nitrate reductase delta subunit BV122_1179 PF04976 DMSO reductase anchor subunit (DmsC) BV122_118 PF12821 Threonine/Serine exporter, ThrE BV122_118 PF06738 Putative threonine/serine exporter BV122_1180 PF12800 4Fe-4S binding domain BV122_1180 PF13247 4Fe-4S dicluster domain BV122_1181 PF12800 4Fe-4S binding domain BV122_1181 PF13247 4Fe-4S dicluster domain BV122_1182 PF01568 Molydopterin dinucleotide binding domain BV122_1182 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BV122_1182 PF00384 Molybdopterin oxidoreductase BV122_1183 PF01841 Transglutaminase-like superfamily BV122_1185 PF00403 Heavy-metal-associated domain BV122_1186 PF00005 ABC transporter BV122_1186 PF00664 ABC transporter transmembrane region BV122_1187 PF12833 Helix-turn-helix domain BV122_1187 PF02311 AraC-like ligand binding domain BV122_1188 PF02627 Carboxymuconolactone decarboxylase family BV122_1189 PF04851 Type III restriction enzyme, res subunit BV122_119 PF12821 Threonine/Serine exporter, ThrE BV122_119 PF06738 Putative threonine/serine exporter BV122_1190 PF01555 DNA methylase BV122_1191 PF01351 Ribonuclease HII BV122_1192 PF02684 Lipid-A-disaccharide synthetase BV122_1193 PF00132 Bacterial transferase hexapeptide (six repeats) BV122_1193 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BV122_1194 PF07977 FabA-like domain BV122_1195 PF00884 Sulfatase BV122_1196 PF00696 Amino acid kinase family BV122_1197 PF03916 Polysulphide reductase, NrfD BV122_1198 PF13247 4Fe-4S dicluster domain BV122_12 PF03603 DNA polymerase III psi subunit BV122_1200 PF02335 Cytochrome c552 BV122_1201 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BV122_1201 PF00271 Helicase conserved C-terminal domain BV122_1201 PF04408 Helicase associated domain (HA2) BV122_1201 PF11898 Domain of unknown function (DUF3418) BV122_1201 PF00270 DEAD/DEAH box helicase BV122_1202 PF04241 Protein of unknown function (DUF423) BV122_1203 PF04284 Protein of unknown function (DUF441) BV122_1204 PF02322 Cytochrome bd terminal oxidase subunit II BV122_1205 PF01654 Cytochrome bd terminal oxidase subunit I BV122_1206 PF00117 Glutamine amidotransferase class-I BV122_1206 PF06418 CTP synthase N-terminus BV122_1207 PF04973 Nicotinamide mononucleotide transporter BV122_1208 PF00005 ABC transporter BV122_1209 PF00528 Binding-protein-dependent transport system inner membrane component BV122_121 PF02403 Seryl-tRNA synthetase N-terminal domain BV122_121 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BV122_1210 PF00497 Bacterial extracellular solute-binding proteins, family 3 BV122_1211 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BV122_1212 PF01722 BolA-like protein BV122_1213 PF13466 STAS domain BV122_1214 PF05494 MlaC protein BV122_1215 PF02470 MlaD protein BV122_1216 PF02405 Permease MlaE BV122_1217 PF00005 ABC transporter BV122_1218 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BV122_1218 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BV122_1219 PF00005 ABC transporter BV122_122 PF00043 Glutathione S-transferase, C-terminal domain BV122_122 PF02798 Glutathione S-transferase, N-terminal domain BV122_1220 PF03379 CcmB protein BV122_1221 PF01578 Cytochrome C assembly protein BV122_1222 PF04995 Heme exporter protein D (CcmD) BV122_1223 PF03100 CcmE BV122_1224 PF01578 Cytochrome C assembly protein BV122_1224 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BV122_1225 PF08534 Redoxin BV122_1226 PF03918 Cytochrome C biogenesis protein BV122_1227 PF03918 Cytochrome C biogenesis protein BV122_123 PF00593 TonB dependent receptor BV122_123 PF07715 TonB-dependent Receptor Plug Domain BV122_1230 PF00533 BRCA1 C Terminus (BRCT) domain BV122_1230 PF01653 NAD-dependent DNA ligase adenylation domain BV122_1230 PF12826 Helix-hairpin-helix motif BV122_1230 PF03120 NAD-dependent DNA ligase OB-fold domain BV122_1230 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BV122_1231 PF04354 ZipA, C-terminal FtsZ-binding domain BV122_1234 PF00291 Pyridoxal-phosphate dependent enzyme BV122_1235 PF07690 Major Facilitator Superfamily BV122_1236 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BV122_1237 PF12833 Helix-turn-helix domain BV122_1238 PF03553 Na+/H+ antiporter family BV122_1239 PF00155 Aminotransferase class I and II BV122_1241 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BV122_1241 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BV122_1242 PF01370 NAD dependent epimerase/dehydratase family BV122_1243 PF00578 AhpC/TSA family BV122_1244 PF01791 DeoC/LacD family aldolase BV122_1245 PF01078 Magnesium chelatase, subunit ChlI BV122_1245 PF13335 Magnesium chelatase, subunit ChlI C-terminal BV122_1246 PF01926 50S ribosome-binding GTPase BV122_1247 PF04393 Protein of unknown function (DUF535) BV122_1248 PF00005 ABC transporter BV122_1248 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BV122_1249 PF00005 ABC transporter BV122_1249 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BV122_1250 PF12911 N-terminal TM domain of oligopeptide transport permease C BV122_1250 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1251 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1253 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BV122_1254 PF00923 Transaldolase/Fructose-6-phosphate aldolase BV122_1255 PF02554 Carbon starvation protein CstA BV122_1256 PF02381 MraZ protein, putative antitoxin-like BV122_1257 PF01795 MraW methylase family BV122_1258 PF04999 Cell division protein FtsL BV122_1259 PF03717 Penicillin-binding Protein dimerisation domain BV122_1259 PF00905 Penicillin binding protein transpeptidase domain BV122_1260 PF01225 Mur ligase family, catalytic domain BV122_1260 PF02875 Mur ligase family, glutamate ligase domain BV122_1260 PF08245 Mur ligase middle domain BV122_1261 PF01225 Mur ligase family, catalytic domain BV122_1261 PF08245 Mur ligase middle domain BV122_1261 PF02875 Mur ligase family, glutamate ligase domain BV122_1262 PF00953 Glycosyl transferase family 4 BV122_1262 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BV122_1263 PF08245 Mur ligase middle domain BV122_1263 PF02875 Mur ligase family, glutamate ligase domain BV122_1264 PF01098 Cell cycle protein BV122_1265 PF04101 Glycosyltransferase family 28 C-terminal domain BV122_1265 PF03033 Glycosyltransferase family 28 N-terminal domain BV122_1267 PF01225 Mur ligase family, catalytic domain BV122_1267 PF02875 Mur ligase family, glutamate ligase domain BV122_1267 PF08245 Mur ligase middle domain BV122_1268 PF01820 D-ala D-ala ligase N-terminus BV122_1268 PF07478 D-ala D-ala ligase C-terminus BV122_1269 PF03799 Cell division protein FtsQ BV122_1269 PF08478 POTRA domain, FtsQ-type BV122_1270 PF02491 SHS2 domain inserted in FTSA BV122_1271 PF00091 Tubulin/FtsZ family, GTPase domain BV122_1271 PF12327 FtsZ family, C-terminal domain BV122_1272 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BV122_1273 PF01817 Chorismate mutase type II BV122_1273 PF00800 Prephenate dehydratase BV122_1274 PF03668 P-loop ATPase protein family BV122_1275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BV122_1276 PF12399 Branched-chain amino acid ATP-binding cassette transporter BV122_1276 PF00005 ABC transporter BV122_1277 PF03968 OstA-like protein BV122_1278 PF06835 Lipopolysaccharide-assembly, LptC-related BV122_1279 PF04751 Protein of unknown function (DUF615) BV122_1280 PF01523 Putative modulator of DNA gyrase BV122_1281 PF00156 Phosphoribosyl transferase domain BV122_1282 PF01810 LysE type translocator BV122_1283 PF00375 Sodium:dicarboxylate symporter family BV122_1286 PF00005 ABC transporter BV122_1286 PF00664 ABC transporter transmembrane region BV122_1287 PF00664 ABC transporter transmembrane region BV122_1287 PF00005 ABC transporter BV122_1288 PF07992 Pyridine nucleotide-disulphide oxidoreductase BV122_1290 PF00762 Ferrochelatase BV122_1291 PF03061 Thioesterase superfamily BV122_1292 PF02913 FAD linked oxidases, C-terminal domain BV122_1292 PF13183 4Fe-4S dicluster domain BV122_1292 PF01565 FAD binding domain BV122_1293 PF00691 OmpA family BV122_1293 PF01389 OmpA-like transmembrane domain BV122_1294 PF00462 Glutaredoxin BV122_1295 PF00155 Aminotransferase class I and II BV122_1296 PF00266 Aminotransferase class-V BV122_1297 PF04363 Protein of unknown function (DUF496) BV122_1298 PF01063 Amino-transferase class IV BV122_1299 PF00425 chorismate binding enzyme BV122_13 PF05175 Methyltransferase small domain BV122_13 PF08468 Methyltransferase small domain N-terminal BV122_1300 PF00117 Glutamine amidotransferase class-I BV122_1301 PF02773 S-adenosylmethionine synthetase, C-terminal domain BV122_1301 PF00438 S-adenosylmethionine synthetase, N-terminal domain BV122_1301 PF02772 S-adenosylmethionine synthetase, central domain BV122_1302 PF10263 SprT-like family BV122_1302 PF17283 SprT-like zinc ribbon domain BV122_1303 PF02462 Opacity family porin protein BV122_1306 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1307 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1308 PF00497 Bacterial extracellular solute-binding proteins, family 3 BV122_1309 PF00005 ABC transporter BV122_131 PF01170 Putative RNA methylase family UPF0020 BV122_131 PF10672 S-adenosylmethionine-dependent methyltransferase BV122_131 PF02926 THUMP domain BV122_1310 PF13580 SIS domain BV122_1312 PF01068 ATP dependent DNA ligase domain BV122_1312 PF14743 DNA ligase OB-like domain BV122_1313 PF00005 ABC transporter BV122_1313 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BV122_1314 PF00005 ABC transporter BV122_1314 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BV122_1315 PF12911 N-terminal TM domain of oligopeptide transport permease C BV122_1315 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1316 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1318 PF13361 UvrD-like helicase C-terminal domain BV122_1318 PF00580 UvrD/REP helicase N-terminal domain BV122_1319 PF04055 Radical SAM superfamily BV122_1320 PF01242 6-pyruvoyl tetrahydropterin synthase BV122_1321 PF06508 Queuosine biosynthesis protein QueC BV122_1323 PF01063 Amino-transferase class IV BV122_1324 PF03466 LysR substrate binding domain BV122_1324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_1325 PF03466 LysR substrate binding domain BV122_1325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_1326 PF01728 FtsJ-like methyltransferase BV122_1326 PF18125 RlmM ferredoxin-like domain BV122_1327 PF00549 CoA-ligase BV122_1327 PF08442 ATP-grasp domain BV122_1328 PF02629 CoA binding domain BV122_1328 PF00549 CoA-ligase BV122_1329 PF01300 Telomere recombination BV122_133 PF03562 MltA specific insert domain BV122_133 PF06725 3D domain BV122_1330 PF00849 RNA pseudouridylate synthase BV122_1330 PF01479 S4 domain BV122_1331 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_1331 PF03466 LysR substrate binding domain BV122_1332 PF05175 Methyltransferase small domain BV122_1333 PF01713 Smr domain BV122_1334 PF01515 Phosphate acetyl/butaryl transferase BV122_1334 PF07085 DRTGG domain BV122_1335 PF00871 Acetokinase family BV122_1336 PF04217 Protein of unknown function, DUF412 BV122_1337 PF02674 Colicin V production protein BV122_1338 PF00156 Phosphoribosyl transferase domain BV122_1339 PF01370 NAD dependent epimerase/dehydratase family BV122_1339 PF08338 Domain of unknown function (DUF1731) BV122_134 PF00899 ThiF family BV122_1340 PF02863 Arginine repressor, C-terminal domain BV122_1340 PF01316 Arginine repressor, DNA binding domain BV122_1341 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BV122_1341 PF00056 lactate/malate dehydrogenase, NAD binding domain BV122_1342 PF00152 tRNA synthetases class II (D, K and N) BV122_1342 PF01336 OB-fold nucleic acid binding domain BV122_1343 PF03462 PCRF domain BV122_1343 PF00472 RF-1 domain BV122_1344 PF10411 Disulfide bond isomerase protein N-terminus BV122_1344 PF13098 Thioredoxin-like domain BV122_1345 PF01368 DHH family BV122_1345 PF02272 DHHA1 domain BV122_1345 PF17768 RecJ OB domain BV122_1347 PF01048 Phosphorylase superfamily BV122_1348 PF07715 TonB-dependent Receptor Plug Domain BV122_1348 PF00593 TonB dependent receptor BV122_1349 PF02652 L-lactate permease BV122_135 PF01297 Zinc-uptake complex component A periplasmic BV122_1350 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BV122_1351 PF01416 tRNA pseudouridine synthase BV122_1352 PF03601 Conserved hypothetical protein 698 BV122_1353 PF00005 ABC transporter BV122_1354 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BV122_1354 PF00005 ABC transporter BV122_1355 PF12911 N-terminal TM domain of oligopeptide transport permease C BV122_1355 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1356 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1357 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BV122_1358 PF04317 YcjX-like family, DUF463 BV122_1359 PF00311 Phosphoenolpyruvate carboxylase BV122_136 PF10063 Uncharacterized integral membrane protein (DUF2301) BV122_1360 PF00356 Bacterial regulatory proteins, lacI family BV122_1362 PF14602 Hexapeptide repeat of succinyl-transferase BV122_1362 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BV122_1362 PF00132 Bacterial transferase hexapeptide (six repeats) BV122_1363 PF00709 Adenylosuccinate synthetase BV122_1364 PF00696 Amino acid kinase family BV122_137 PF08245 Mur ligase middle domain BV122_137 PF02875 Mur ligase family, glutamate ligase domain BV122_137 PF01225 Mur ligase family, catalytic domain BV122_1370 PF01386 Ribosomal L25p family BV122_1371 PF09335 SNARE associated Golgi protein BV122_1372 PF06295 Protein of unknown function (DUF1043) BV122_1373 PF01042 Endoribonuclease L-PSP BV122_1374 PF14256 YwiC-like protein BV122_1375 PF08238 Sel1 repeat BV122_1376 PF13411 MerR HTH family regulatory protein BV122_1377 PF10670 Domain of unknown function (DUF4198) BV122_1379 PF01891 Cobalt uptake substrate-specific transmembrane region BV122_138 PF01053 Cys/Met metabolism PLP-dependent enzyme BV122_1381 PF00005 ABC transporter BV122_1382 PF00155 Aminotransferase class I and II BV122_1383 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BV122_1383 PF02222 ATP-grasp domain BV122_1384 PF00731 AIR carboxylase BV122_1387 PF01433 Peptidase family M1 domain BV122_1387 PF11940 Domain of unknown function (DUF3458) Ig-like fold BV122_1387 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BV122_1388 PF00677 Lumazine binding domain BV122_1389 PF01554 MatE BV122_139 PF10417 C-terminal domain of 1-Cys peroxiredoxin BV122_139 PF00578 AhpC/TSA family BV122_1390 PF17746 SfsA N-terminal OB domain BV122_1390 PF03749 Sugar fermentation stimulation protein RE domain BV122_1391 PF01479 S4 domain BV122_1391 PF00579 tRNA synthetases class I (W and Y) BV122_1392 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BV122_1392 PF14572 Phosphoribosyl synthetase-associated domain BV122_1393 PF08544 GHMP kinases C terminal BV122_1393 PF00288 GHMP kinases N terminal domain BV122_1394 PF03550 Outer membrane lipoprotein LolB BV122_1395 PF12627 Probable RNA and SrmB- binding site of polymerase A BV122_1395 PF01743 Poly A polymerase head domain BV122_1395 PF01966 HD domain BV122_1396 PF08239 Bacterial SH3 domain BV122_1397 PF01384 Phosphate transporter family BV122_1398 PF01865 Protein of unknown function DUF47 BV122_1399 PF07681 DoxX BV122_14 PF07650 KH domain BV122_14 PF01926 50S ribosome-binding GTPase BV122_140 PF01066 CDP-alcohol phosphatidyltransferase BV122_1401 PF05114 Protein of unknown function (DUF692) BV122_1402 PF09836 Putative DNA-binding domain BV122_1404 PF08765 Mor transcription activator family BV122_1405 PF00950 ABC 3 transport family BV122_1406 PF00950 ABC 3 transport family BV122_1409 PF18254 HMW1 domain 2 BV122_1409 PF18071 HMW1C N-terminal BV122_1412 PF01928 CYTH domain BV122_1413 PF18073 Rubredoxin metal binding domain BV122_1414 PF01037 Lrp/AsnC ligand binding domain BV122_1415 PF17854 FtsK alpha domain BV122_1415 PF09397 Ftsk gamma domain BV122_1415 PF01580 FtsK/SpoIIIE family BV122_1416 PF03548 Outer membrane lipoprotein carrier protein LolA BV122_1417 PF00004 ATPase family associated with various cellular activities (AAA) BV122_1417 PF16193 AAA C-terminal domain BV122_1417 PF12002 MgsA AAA+ ATPase C terminal BV122_1418 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BV122_1419 PF00551 Formyl transferase BV122_1419 PF01842 ACT domain BV122_1420 PF00816 H-NS histone family BV122_1421 PF03553 Na+/H+ antiporter family BV122_1422 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BV122_1422 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BV122_1422 PF00205 Thiamine pyrophosphate enzyme, central domain BV122_1423 PF10369 Small subunit of acetolactate synthase BV122_1424 PF05746 DALR anticodon binding domain BV122_1424 PF03485 Arginyl tRNA synthetase N terminal domain BV122_1424 PF00750 tRNA synthetases class I (R) BV122_1425 PF06185 YecM protein BV122_1427 PF05433 Glycine zipper 2TM domain BV122_1428 PF00535 Glycosyl transferase family 2 BV122_1430 PF00342 Phosphoglucose isomerase BV122_1431 PF01168 Alanine racemase, N-terminal domain BV122_1431 PF00842 Alanine racemase, C-terminal domain BV122_1432 PF00772 DnaB-like helicase N terminal domain BV122_1432 PF03796 DnaB-like helicase C terminal domain BV122_1433 PF02887 Pyruvate kinase, alpha/beta domain BV122_1433 PF00224 Pyruvate kinase, barrel domain BV122_1436 PF00589 Phage integrase family BV122_1437 PF00589 Phage integrase family BV122_1439 PF06074 Protein of unknown function (DUF935) BV122_144 PF00719 Inorganic pyrophosphatase BV122_1442 PF04315 Elongation factor P hydroxylase BV122_1443 PF08238 Sel1 repeat BV122_1447 PF00472 RF-1 domain BV122_1447 PF03462 PCRF domain BV122_1448 PF06271 RDD family BV122_1449 PF17827 PrmC N-terminal domain BV122_1449 PF13847 Methyltransferase domain BV122_145 PF00860 Permease family BV122_1450 PF13369 Transglutaminase-like superfamily BV122_1451 PF00793 DAHP synthetase I family BV122_1452 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BV122_1452 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BV122_1453 PF12704 MacB-like periplasmic core domain BV122_1453 PF02687 FtsX-like permease family BV122_1454 PF00202 Aminotransferase class-III BV122_1455 PF00155 Aminotransferase class I and II BV122_1456 PF04301 Protein of unknown function (DUF452) BV122_1457 PF08241 Methyltransferase domain BV122_1459 PF00005 ABC transporter BV122_1460 PF02687 FtsX-like permease family BV122_1460 PF12704 MacB-like periplasmic core domain BV122_1461 PF00793 DAHP synthetase I family BV122_1462 PF00717 Peptidase S24-like BV122_1463 PF00375 Sodium:dicarboxylate symporter family BV122_1464 PF02525 Flavodoxin-like fold BV122_1466 PF00881 Nitroreductase family BV122_1467 PF01343 Peptidase family S49 BV122_1468 PF04991 LicD family BV122_1469 PF12804 MobA-like NTP transferase domain BV122_147 PF00485 Phosphoribulokinase / Uridine kinase family BV122_1470 PF00892 EamA-like transporter family BV122_1472 PF01266 FAD dependent oxidoreductase BV122_1472 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BV122_1473 PF00109 Beta-ketoacyl synthase, N-terminal domain BV122_1473 PF02801 Beta-ketoacyl synthase, C-terminal domain BV122_1474 PF00462 Glutaredoxin BV122_1475 PF18030 RimK PreATP-grasp domain BV122_1475 PF08443 RimK-like ATP-grasp domain BV122_1476 PF03616 Sodium/glutamate symporter BV122_1477 PF00521 DNA gyrase/topoisomerase IV, subunit A BV122_1477 PF03989 DNA gyrase C-terminal domain, beta-propeller BV122_1478 PF01751 Toprim domain BV122_1478 PF00986 DNA gyrase B subunit, carboxyl terminus BV122_1478 PF00204 DNA gyrase B BV122_1478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BV122_1479 PF03279 Bacterial lipid A biosynthesis acyltransferase BV122_148 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) BV122_1480 PF01467 Cytidylyltransferase-like BV122_1480 PF00294 pfkB family carbohydrate kinase BV122_1481 PF00145 C-5 cytosine-specific DNA methylase BV122_1486 PF00484 Carbonic anhydrase BV122_1488 PF01336 OB-fold nucleic acid binding domain BV122_1488 PF00152 tRNA synthetases class II (D, K and N) BV122_1489 PF00885 6,7-dimethyl-8-ribityllumazine synthase BV122_1490 PF01029 NusB family BV122_1491 PF00586 AIR synthase related protein, N-terminal domain BV122_1491 PF02769 AIR synthase related protein, C-terminal domain BV122_1492 PF04608 Phosphatidylglycerophosphatase A BV122_1493 PF01810 LysE type translocator BV122_1494 PF00111 2Fe-2S iron-sulfur cluster binding domain BV122_1495 PF05173 Dihydrodipicolinate reductase, C-terminus BV122_1495 PF01113 Dihydrodipicolinate reductase, N-terminus BV122_1497 PF01409 tRNA synthetases class II core domain (F) BV122_1497 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BV122_1498 PF03484 tRNA synthetase B5 domain BV122_1498 PF03483 B3/4 domain BV122_1498 PF03147 Ferredoxin-fold anticodon binding domain BV122_1498 PF01588 Putative tRNA binding domain BV122_1498 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BV122_1499 PF00216 Bacterial DNA-binding protein BV122_15 PF14622 Ribonuclease-III-like BV122_15 PF00035 Double-stranded RNA binding motif BV122_150 PF07690 Major Facilitator Superfamily BV122_1500 PF00877 NlpC/P60 family BV122_1502 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BV122_1503 PF02146 Sir2 family BV122_1505 PF01580 FtsK/SpoIIIE family BV122_1505 PF17854 FtsK alpha domain BV122_1505 PF09397 Ftsk gamma domain BV122_1505 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BV122_1506 PF02146 Sir2 family BV122_1509 PF00004 ATPase family associated with various cellular activities (AAA) BV122_1509 PF05362 Lon protease (S16) C-terminal proteolytic domain BV122_1509 PF02190 ATP-dependent protease La (LON) substrate-binding domain BV122_151 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BV122_151 PF01926 50S ribosome-binding GTPase BV122_1510 PF16347 Domain of unknown function (DUF4976) BV122_1511 PF01263 Aldose 1-epimerase BV122_1512 PF05198 Translation initiation factor IF-3, N-terminal domain BV122_1512 PF00707 Translation initiation factor IF-3, C-terminal domain BV122_1513 PF01632 Ribosomal protein L35 BV122_1514 PF00453 Ribosomal protein L20 BV122_1515 PF13361 UvrD-like helicase C-terminal domain BV122_1515 PF00580 UvrD/REP helicase N-terminal domain BV122_1515 PF12705 PD-(D/E)XK nuclease superfamily BV122_1516 PF13538 UvrD-like helicase C-terminal domain BV122_1517 PF06303 MatP N-terminal domain BV122_1517 PF17414 MatP C-terminal ribbon-helix-helix domain BV122_1518 PF05362 Lon protease (S16) C-terminal proteolytic domain BV122_1518 PF13654 AAA domain BV122_1519 PF07977 FabA-like domain BV122_1522 PF00312 Ribosomal protein S15 BV122_1523 PF12762 ISXO2-like transposase domain BV122_1526 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BV122_1527 PF01272 Transcription elongation factor, GreA/GreB, C-term BV122_1527 PF03449 Transcription elongation factor, N-terminal BV122_1528 PF01985 CRS1 / YhbY (CRM) domain BV122_1529 PF01728 FtsJ-like methyltransferase BV122_1530 PF17862 AAA+ lid domain BV122_1530 PF00004 ATPase family associated with various cellular activities (AAA) BV122_1530 PF01434 Peptidase family M41 BV122_1530 PF06480 FtsH Extracellular BV122_1531 PF00809 Pterin binding enzyme BV122_1532 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BV122_1532 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BV122_1532 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BV122_1532 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BV122_1533 PF00300 Histidine phosphatase superfamily (branch 1) BV122_1535 PF02321 Outer membrane efflux protein BV122_1539 PF08281 Sigma-70, region 4 BV122_1539 PF04542 Sigma-70 region 2 BV122_154 PF00929 Exonuclease BV122_1543 PF01625 Peptide methionine sulfoxide reductase BV122_1543 PF01641 SelR domain BV122_1544 PF02683 Cytochrome C biogenesis protein transmembrane region BV122_1545 PF08534 Redoxin BV122_1546 PF04269 Protein of unknown function, DUF440 BV122_1547 PF00899 ThiF family BV122_1548 PF03453 MoeA N-terminal region (domain I and II) BV122_1548 PF00994 Probable molybdopterin binding domain BV122_1548 PF03454 MoeA C-terminal region (domain IV) BV122_1549 PF01227 GTP cyclohydrolase I BV122_155 PF00075 RNase H BV122_1550 PF05166 YcgL domain BV122_1552 PF02219 Methylenetetrahydrofolate reductase BV122_1553 PF00572 Ribosomal protein L13 BV122_1554 PF00380 Ribosomal protein S9/S16 BV122_1555 PF02798 Glutathione S-transferase, N-terminal domain BV122_1555 PF00043 Glutathione S-transferase, C-terminal domain BV122_1556 PF04386 Stringent starvation protein B BV122_1557 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BV122_1557 PF02779 Transketolase, pyrimidine binding domain BV122_1557 PF02780 Transketolase, C-terminal domain BV122_1558 PF02780 Transketolase, C-terminal domain BV122_1558 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BV122_1558 PF02779 Transketolase, pyrimidine binding domain BV122_1559 PF00348 Polyprenyl synthetase BV122_1560 PF02609 Exonuclease VII small subunit BV122_1561 PF02926 THUMP domain BV122_1561 PF02568 Thiamine biosynthesis protein (ThiI) BV122_1562 PF04287 tRNA pseudouridine synthase C BV122_1563 PF00849 RNA pseudouridylate synthase BV122_1564 PF03701 Uncharacterised protein family (UPF0181) BV122_1565 PF00313 'Cold-shock' DNA-binding domain BV122_1566 PF04073 Aminoacyl-tRNA editing domain BV122_1568 PF00290 Tryptophan synthase alpha chain BV122_1569 PF00291 Pyridoxal-phosphate dependent enzyme BV122_157 PF13609 Gram-negative porin BV122_1570 PF00106 short chain dehydrogenase BV122_1571 PF02769 AIR synthase related protein, C-terminal domain BV122_1571 PF00586 AIR synthase related protein, N-terminal domain BV122_1572 PF00551 Formyl transferase BV122_1573 PF10670 Domain of unknown function (DUF4198) BV122_1574 PF00582 Universal stress protein family BV122_1575 PF00027 Cyclic nucleotide-binding domain BV122_1575 PF13545 Crp-like helix-turn-helix domain BV122_1577 PF00589 Phage integrase family BV122_158 PF01979 Amidohydrolase family BV122_1586 PF04381 Putative exonuclease, RdgC BV122_1588 PF00436 Single-strand binding protein family BV122_159 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BV122_1591 PF03837 RecT family BV122_1598 PF00145 C-5 cytosine-specific DNA methylase BV122_16 PF10502 Signal peptidase, peptidase S26 BV122_160 PF00701 Dihydrodipicolinate synthetase family BV122_161 PF01380 SIS domain BV122_161 PF01418 Helix-turn-helix domain, rpiR family BV122_1618 PF10828 Protein of unknown function (DUF2570) BV122_162 PF00480 ROK family BV122_1622 PF03592 Terminase small subunit BV122_1623 PF04466 Phage terminase large subunit BV122_1623 PF17288 Terminase RNAseH like domain BV122_1624 PF04466 Phage terminase large subunit BV122_1624 PF17288 Terminase RNAseH like domain BV122_1625 PF06381 Protein of unknown function (DUF1073) BV122_1626 PF04233 Phage Mu protein F like protein BV122_1627 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) BV122_1628 PF01180 Dihydroorotate dehydrogenase BV122_1629 PF02811 PHP domain BV122_163 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BV122_1630 PF16036 Chalcone isomerase-like BV122_1631 PF00206 Lyase BV122_1631 PF10415 Fumarase C C-terminus BV122_1632 PF01501 Glycosyl transferase family 8 BV122_1635 PF04364 DNA polymerase III chi subunit, HolC BV122_1637 PF06414 Zeta toxin BV122_1638 PF06414 Zeta toxin BV122_164 PF03480 Bacterial extracellular solute-binding protein, family 7 BV122_1641 PF08264 Anticodon-binding domain of tRNA BV122_1641 PF00133 tRNA synthetases class I (I, L, M and V) BV122_1641 PF10458 Valyl tRNA synthetase tRNA binding arm BV122_1642 PF01455 HupF/HypC family BV122_1643 PF00218 Indole-3-glycerol phosphate synthase BV122_1643 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BV122_1644 PF02885 Glycosyl transferase family, helical bundle domain BV122_1644 PF00591 Glycosyl transferase family, a/b domain BV122_1645 PF14552 Tautomerase enzyme BV122_1646 PF00117 Glutamine amidotransferase class-I BV122_1647 PF04715 Anthranilate synthase component I, N terminal region BV122_1647 PF00425 chorismate binding enzyme BV122_1649 PF00210 Ferritin-like domain BV122_165 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BV122_165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BV122_1650 PF00210 Ferritin-like domain BV122_1651 PF12849 PBP superfamily domain BV122_1652 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1653 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1654 PF00005 ABC transporter BV122_1655 PF00486 Transcriptional regulatory protein, C terminal BV122_1655 PF00072 Response regulator receiver domain BV122_1656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BV122_1656 PF00512 His Kinase A (phospho-acceptor) domain BV122_1657 PF08411 Exonuclease C-terminal BV122_1657 PF00929 Exonuclease BV122_166 PF01344 Kelch motif BV122_1660 PF04310 MukB N-terminal BV122_1660 PF16330 MukB hinge domain BV122_1661 PF04288 MukE-like family BV122_1662 PF09554 HaeII restriction endonuclease BV122_1663 PF00145 C-5 cytosine-specific DNA methylase BV122_1664 PF17192 MukF middle domain BV122_1664 PF17193 MukF C-terminal domain BV122_1664 PF03882 MukF winged-helix domain BV122_1665 PF01171 PP-loop family BV122_1666 PF04358 DsrC like protein BV122_1667 PF03459 TOBE domain BV122_1668 PF07715 TonB-dependent Receptor Plug Domain BV122_1669 PF00675 Insulinase (Peptidase family M16) BV122_1669 PF05193 Peptidase M16 inactive domain BV122_1670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BV122_1670 PF03129 Anticodon binding domain BV122_1670 PF02824 TGS domain BV122_1670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BV122_1672 PF02525 Flavodoxin-like fold BV122_1673 PF08272 Topoisomerase I zinc-ribbon-like BV122_1673 PF01131 DNA topoisomerase BV122_1673 PF01751 Toprim domain BV122_1673 PF01396 Topoisomerase DNA binding C4 zinc finger BV122_1674 PF03466 LysR substrate binding domain BV122_1674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_1675 PF02233 NAD(P) transhydrogenase beta subunit BV122_1676 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BV122_1676 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BV122_1676 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BV122_1677 PF00343 Carbohydrate phosphorylase BV122_1679 PF08323 Starch synthase catalytic domain BV122_1679 PF00534 Glycosyl transferases group 1 BV122_168 PF01145 SPFH domain / Band 7 family BV122_1680 PF00483 Nucleotidyl transferase BV122_1681 PF00128 Alpha amylase, catalytic domain BV122_1681 PF18390 Glycogen debranching enzyme C-terminal domain BV122_1681 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BV122_1682 PF02806 Alpha amylase, C-terminal all-beta domain BV122_1682 PF00128 Alpha amylase, catalytic domain BV122_1682 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BV122_1683 PF02446 4-alpha-glucanotransferase BV122_1684 PF03692 Putative zinc- or iron-chelating domain BV122_1685 PF00749 tRNA synthetases class I (E and Q), catalytic domain BV122_1685 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BV122_1686 PF00575 S1 RNA binding domain BV122_1686 PF10150 Ribonuclease E/G family BV122_1687 PF00474 Sodium:solute symporter family BV122_1688 PF08003 Protein of unknown function (DUF1698) BV122_1689 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BV122_1689 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BV122_169 PF01145 SPFH domain / Band 7 family BV122_1690 PF00210 Ferritin-like domain BV122_1691 PF07687 Peptidase dimerisation domain BV122_1691 PF01546 Peptidase family M20/M25/M40 BV122_1693 PF00005 ABC transporter BV122_1693 PF08402 TOBE domain BV122_1694 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1695 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1696 PF13416 Bacterial extracellular solute-binding protein BV122_1698 PF13286 Phosphohydrolase-associated domain BV122_1698 PF01966 HD domain BV122_1699 PF04172 LrgB-like family BV122_17 PF03144 Elongation factor Tu domain 2 BV122_17 PF00009 Elongation factor Tu GTP binding domain BV122_17 PF00679 Elongation factor G C-terminus BV122_17 PF06421 GTP-binding protein LepA C-terminus BV122_170 PF01648 4'-phosphopantetheinyl transferase superfamily BV122_1700 PF03788 LrgA family BV122_1701 PF00565 Staphylococcal nuclease homologue BV122_1702 PF00266 Aminotransferase class-V BV122_1703 PF02657 Fe-S metabolism associated domain BV122_1704 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) BV122_1705 PF14489 QueF-like protein BV122_1705 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BV122_1706 PF01817 Chorismate mutase type II BV122_1706 PF02153 Prephenate dehydrogenase BV122_1707 PF01509 TruB family pseudouridylate synthase (N terminal domain) BV122_1707 PF16198 tRNA pseudouridylate synthase B C-terminal domain BV122_1707 PF09157 Pseudouridine synthase II TruB, C-terminal BV122_1708 PF02033 Ribosome-binding factor A BV122_1709 PF02384 N-6 DNA Methylase BV122_171 PF03605 Anaerobic c4-dicarboxylate membrane transporter BV122_1710 PF01420 Type I restriction modification DNA specificity domain BV122_1712 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BV122_1712 PF11867 Domain of unknown function (DUF3387) BV122_1712 PF18766 SWI2/SNF2 ATPase BV122_1713 PF00009 Elongation factor Tu GTP binding domain BV122_1713 PF08364 Bacterial translation initiation factor IF-2 associated region BV122_1713 PF04760 Translation initiation factor IF-2, N-terminal region BV122_1713 PF11987 Translation-initiation factor 2 BV122_1714 PF00575 S1 RNA binding domain BV122_1714 PF08529 NusA N-terminal domain BV122_1714 PF13184 NusA-like KH domain BV122_1715 PF02576 RimP N-terminal domain BV122_1715 PF17384 RimP C-terminal SH3 domain BV122_172 PF00550 Phosphopantetheine attachment site BV122_174 PF00698 Acyl transferase domain BV122_1746 PF03406 Phage tail fibre repeat BV122_175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BV122_175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BV122_176 PF01783 Ribosomal L32p protein family BV122_1768 PF00959 Phage lysozyme BV122_177 PF02620 Large ribosomal RNA subunit accumulation protein YceD BV122_1777 PF02348 Cytidylyltransferase BV122_1778 PF00881 Nitroreductase family BV122_1779 PF10609 NUBPL iron-transfer P-loop NTPase BV122_178 PF02666 Phosphatidylserine decarboxylase BV122_1780 PF08264 Anticodon-binding domain of tRNA BV122_1780 PF09334 tRNA synthetases class I (M) BV122_1780 PF01588 Putative tRNA binding domain BV122_1781 PF09313 Domain of unknown function (DUF1971) BV122_1781 PF03848 Tellurite resistance protein TehB BV122_1782 PF12706 Beta-lactamase superfamily domain BV122_1782 PF16123 Hydroxyacylglutathione hydrolase C-terminus BV122_1783 PF13649 Methyltransferase domain BV122_1785 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BV122_1785 PF18381 YcaO cyclodehydratase C-terminal domain BV122_1786 PF00521 DNA gyrase/topoisomerase IV, subunit A BV122_1786 PF03989 DNA gyrase C-terminal domain, beta-propeller BV122_1787 PF00561 alpha/beta hydrolase fold BV122_1788 PF02698 DUF218 domain BV122_1789 PF08245 Mur ligase middle domain BV122_179 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BV122_179 PF07992 Pyridine nucleotide-disulphide oxidoreductase BV122_1790 PF01039 Carboxyl transferase domain BV122_1790 PF17848 Acetyl-coA carboxylase zinc finger domain BV122_1791 PF00595 PDZ domain BV122_1792 PF00270 DEAD/DEAH box helicase BV122_1792 PF00271 Helicase conserved C-terminal domain BV122_1792 PF03461 TRCF domain BV122_1792 PF17757 UvrB interaction domain BV122_1792 PF02559 CarD-like/TRCF domain BV122_1793 PF17320 Family of unknown function (DUF5363) BV122_1794 PF05127 Helicase BV122_1794 PF13718 GNAT acetyltransferase 2 BV122_1794 PF17176 tRNA-binding domain BV122_1795 PF04247 Invasion gene expression up-regulator, SirB BV122_1796 PF12848 ABC transporter BV122_1796 PF00005 ABC transporter BV122_1797 PF01381 Helix-turn-helix BV122_1798 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BV122_1799 PF06226 Protein of unknown function (DUF1007) BV122_180 PF03923 Uncharacterized lipoprotein BV122_1800 PF03824 High-affinity nickel-transport protein BV122_1802 PF12344 Ultra-violet resistance protein B BV122_1802 PF17757 UvrB interaction domain BV122_1802 PF04851 Type III restriction enzyme, res subunit BV122_1802 PF00271 Helicase conserved C-terminal domain BV122_1802 PF02151 UvrB/uvrC motif BV122_1803 PF00884 Sulfatase BV122_1804 PF03949 Malic enzyme, NAD binding domain BV122_1804 PF01515 Phosphate acetyl/butaryl transferase BV122_1804 PF00390 Malic enzyme, N-terminal domain BV122_1805 PF08942 Domain of unknown function (DUF1919) BV122_1806 PF00849 RNA pseudouridylate synthase BV122_1806 PF01479 S4 domain BV122_1807 PF07690 Major Facilitator Superfamily BV122_1809 PF03458 UPF0126 domain BV122_181 PF01722 BolA-like protein BV122_1810 PF00171 Aldehyde dehydrogenase family BV122_1811 PF00226 DnaJ domain BV122_1811 PF01556 DnaJ C terminal domain BV122_1811 PF00684 DnaJ central domain BV122_1812 PF00012 Hsp70 protein BV122_1813 PF06097 Bacterial protein of unknown function (DUF945) BV122_1814 PF02142 MGS-like domain BV122_1815 PF17831 Pyruvate dehydrogenase E1 component middle domain BV122_1815 PF00456 Transketolase, thiamine diphosphate binding domain BV122_1816 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BV122_1816 PF02817 e3 binding domain BV122_1816 PF00364 Biotin-requiring enzyme BV122_1817 PF07992 Pyridine nucleotide-disulphide oxidoreductase BV122_1817 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BV122_1818 PF00156 Phosphoribosyl transferase domain BV122_1819 PF12169 DNA polymerase III subunits gamma and tau domain III BV122_1819 PF12170 DNA polymerase III tau subunit V interacting with alpha BV122_182 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BV122_182 PF11973 NQRA C-terminal domain BV122_1821 PF00860 Permease family BV122_1822 PF00308 Bacterial dnaA protein BV122_1823 PF01253 Translation initiation factor SUI1 BV122_1824 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BV122_1825 PF18073 Rubredoxin metal binding domain BV122_1826 PF06305 Lipopolysaccharide assembly protein A domain BV122_1827 PF00216 Bacterial DNA-binding protein BV122_1828 PF00575 S1 RNA binding domain BV122_1829 PF02224 Cytidylate kinase BV122_183 PF03116 NQR2, RnfD, RnfE family BV122_1830 PF01680 SOR/SNZ family BV122_1831 PF01174 SNO glutamine amidotransferase family BV122_1832 PF09330 D-lactate dehydrogenase, membrane binding BV122_1832 PF01565 FAD binding domain BV122_1834 PF00877 NlpC/P60 family BV122_1835 PF01523 Putative modulator of DNA gyrase BV122_1836 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BV122_1837 PF04348 LppC putative lipoprotein BV122_1838 PF02021 Uncharacterised protein family UPF0102 BV122_1839 PF13580 SIS domain BV122_184 PF04205 FMN-binding domain BV122_1840 PF04972 BON domain BV122_1841 PF02867 Ribonucleotide reductase, barrel domain BV122_1841 PF03477 ATP cone domain BV122_1841 PF00317 Ribonucleotide reductase, all-alpha domain BV122_1842 PF00268 Ribonucleotide reductase, small chain BV122_1843 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BV122_1843 PF00364 Biotin-requiring enzyme BV122_1843 PF02817 e3 binding domain BV122_1844 PF02779 Transketolase, pyrimidine binding domain BV122_1844 PF16870 2-oxoglutarate dehydrogenase C-terminal BV122_1844 PF00676 Dehydrogenase E1 component BV122_1844 PF16078 2-oxoglutarate dehydrogenase N-terminus BV122_1845 PF00753 Metallo-beta-lactamase superfamily BV122_1846 PF01026 TatD related DNase BV122_1847 PF05951 Bacterial protein of unknown function (DUF882) BV122_1848 PF03734 L,D-transpeptidase catalytic domain BV122_1849 PF11818 C-terminal domain of tail specific protease (DUF3340) BV122_1849 PF00595 PDZ domain BV122_1849 PF03572 Peptidase family S41 BV122_1849 PF17804 Tail specific protease N-terminal domain BV122_185 PF02508 Rnf-Nqr subunit, membrane protein BV122_1850 PF04352 ProQ/FINO family BV122_1850 PF17516 ProQ C-terminal domain BV122_1852 PF04403 Paraquat-inducible protein A BV122_1853 PF02470 MlaD protein BV122_1854 PF02391 MoaE protein BV122_1855 PF02597 ThiS family BV122_1856 PF01967 MoaC family BV122_1857 PF04055 Radical SAM superfamily BV122_1857 PF06463 Molybdenum Cofactor Synthesis C BV122_1858 PF04405 Domain of Unknown function (DUF542) BV122_1858 PF01814 Hemerythrin HHE cation binding domain BV122_1859 PF01380 SIS domain BV122_1859 PF00571 CBS domain BV122_186 PF02508 Rnf-Nqr subunit, membrane protein BV122_1863 PF18254 HMW1 domain 2 BV122_1863 PF18071 HMW1C N-terminal BV122_1864 PF12805 FUSC-like inner membrane protein yccS BV122_1865 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BV122_1867 PF01343 Peptidase family S49 BV122_1867 PF08496 Peptidase family S49 N-terminal BV122_1868 PF02508 Rnf-Nqr subunit, membrane protein BV122_1869 PF04060 Putative Fe-S cluster BV122_187 PF00175 Oxidoreductase NAD-binding domain BV122_187 PF00970 Oxidoreductase FAD-binding domain BV122_187 PF00111 2Fe-2S iron-sulfur cluster binding domain BV122_1870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BV122_1870 PF10531 SLBB domain BV122_1870 PF13375 RnfC Barrel sandwich hybrid domain BV122_1870 PF12838 4Fe-4S dicluster domain BV122_1870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BV122_1870 PF12838 4Fe-4S dicluster domain BV122_1870 PF13375 RnfC Barrel sandwich hybrid domain BV122_1870 PF10531 SLBB domain BV122_1871 PF03116 NQR2, RnfD, RnfE family BV122_1872 PF04205 FMN-binding domain BV122_1873 PF02508 Rnf-Nqr subunit, membrane protein BV122_1874 PF00633 Helix-hairpin-helix motif BV122_1874 PF00730 HhH-GPD superfamily base excision DNA repair protein BV122_1874 PF10576 Iron-sulfur binding domain of endonuclease III BV122_1875 PF00209 Sodium:neurotransmitter symporter family BV122_1876 PF03459 TOBE domain BV122_1876 PF00005 ABC transporter BV122_1877 PF00528 Binding-protein-dependent transport system inner membrane component BV122_1879 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_1879 PF03459 TOBE domain BV122_188 PF02424 ApbE family BV122_1880 PF00535 Glycosyl transferase family 2 BV122_1881 PF00535 Glycosyl transferase family 2 BV122_1882 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BV122_1883 PF13439 Glycosyltransferase Family 4 BV122_1883 PF00534 Glycosyl transferases group 1 BV122_1884 PF07922 Glycosyltransferase family 52 BV122_1885 PF01943 Polysaccharide biosynthesis protein BV122_1886 PF02698 DUF218 domain BV122_1887 PF01717 Cobalamin-independent synthase, Catalytic domain BV122_1887 PF08267 Cobalamin-independent synthase, N-terminal domain BV122_1888 PF03739 Lipopolysaccharide export system permease LptF/LptG BV122_1889 PF03739 Lipopolysaccharide export system permease LptF/LptG BV122_189 PF04400 (Na+)-NQR maturation NqrM BV122_1890 PF00883 Cytosol aminopeptidase family, catalytic domain BV122_1890 PF02789 Cytosol aminopeptidase family, N-terminal domain BV122_1891 PF02028 BCCT, betaine/carnitine/choline family transporter BV122_1892 PF00512 His Kinase A (phospho-acceptor) domain BV122_1892 PF08521 Two-component sensor kinase N-terminal BV122_1892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BV122_1893 PF00486 Transcriptional regulatory protein, C terminal BV122_1893 PF00072 Response regulator receiver domain BV122_1894 PF04076 Bacterial OB fold (BOF) protein BV122_1896 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BV122_1897 PF00391 PEP-utilising enzyme, mobile domain BV122_1897 PF02896 PEP-utilising enzyme, TIM barrel domain BV122_1897 PF05524 PEP-utilising enzyme, N-terminal BV122_1898 PF00381 PTS HPr component phosphorylation site BV122_1899 PF03193 RsgA GTPase BV122_19 PF01228 Glycine radical BV122_1900 PF00929 Exonuclease BV122_1903 PF00953 Glycosyl transferase family 4 BV122_1904 PF08335 GlnD PII-uridylyltransferase BV122_1904 PF01966 HD domain BV122_1905 PF00557 Metallopeptidase family M24 BV122_1906 PF01521 Iron-sulphur cluster biosynthesis BV122_1907 PF06062 Uncharacterised protein family (UPF0231) BV122_1908 PF00912 Transglycosylase BV122_1908 PF14814 Bifunctional transglycosylase second domain BV122_1908 PF00905 Penicillin binding protein transpeptidase domain BV122_1909 PF01259 SAICAR synthetase BV122_1910 PF00764 Arginosuccinate synthase BV122_1911 PF01566 Natural resistance-associated macrophage protein BV122_1912 PF03746 LamB/YcsF family BV122_1913 PF02626 Carboxyltransferase domain, subdomain A and B BV122_1914 PF02682 Carboxyltransferase domain, subdomain C and D BV122_1915 PF00773 RNB domain BV122_1915 PF00575 S1 RNA binding domain BV122_1915 PF08206 Ribonuclease B OB domain BV122_1917 PF16658 Class II release factor RF3, C-terminal domain BV122_1917 PF00009 Elongation factor Tu GTP binding domain BV122_1917 PF03144 Elongation factor Tu domain 2 BV122_1918 PF10688 Bacterial inner membrane protein BV122_192 PF01479 S4 domain BV122_192 PF00849 RNA pseudouridylate synthase BV122_1920 PF05437 Branched-chain amino acid transport protein (AzlD) BV122_1921 PF03591 AzlC protein BV122_1922 PF03466 LysR substrate binding domain BV122_1922 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_1928 PF01070 FMN-dependent dehydrogenase BV122_1929 PF01177 Asp/Glu/Hydantoin racemase BV122_193 PF13525 Outer membrane lipoprotein BV122_1930 PF17191 RecG wedge domain BV122_1930 PF00271 Helicase conserved C-terminal domain BV122_1930 PF00270 DEAD/DEAH box helicase BV122_1931 PF02824 TGS domain BV122_1931 PF04607 Region found in RelA / SpoT proteins BV122_1931 PF13291 ACT domain BV122_1932 PF01192 RNA polymerase Rpb6 BV122_1933 PF00625 Guanylate kinase BV122_194 PF16747 Surface-adhesin protein E BV122_195 PF04055 Radical SAM superfamily BV122_196 PF01228 Glycine radical BV122_196 PF02901 Pyruvate formate lyase-like BV122_197 PF01226 Formate/nitrite transporter BV122_198 PF00480 ROK family BV122_199 PF01235 Sodium:alanine symporter family BV122_2 PF00501 AMP-binding enzyme BV122_20 PF03167 Uracil DNA glycosylase superfamily BV122_200 PF00756 Putative esterase BV122_201 PF08240 Alcohol dehydrogenase GroES-like domain BV122_201 PF00107 Zinc-binding dehydrogenase BV122_202 PF13411 MerR HTH family regulatory protein BV122_203 PF02416 mttA/Hcf106 family BV122_205 PF00902 Sec-independent protein translocase protein (TatC) BV122_206 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BV122_206 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BV122_207 PF01475 Ferric uptake regulator family BV122_208 PF00258 Flavodoxin BV122_209 PF00561 alpha/beta hydrolase fold BV122_21 PF01938 TRAM domain BV122_21 PF00919 Uncharacterized protein family UPF0004 BV122_21 PF04055 Radical SAM superfamily BV122_210 PF03925 SeqA protein C-terminal domain BV122_210 PF17206 SeqA protein N-terminal domain BV122_211 PF00501 AMP-binding enzyme BV122_212 PF00924 Mechanosensitive ion channel BV122_212 PF12795 Mechanosensitive ion channel porin domain BV122_212 PF12794 Mechanosensitive ion channel inner membrane domain 1 BV122_213 PF01264 Chorismate synthase BV122_214 PF03411 Penicillin-insensitive murein endopeptidase BV122_215 PF01925 Sulfite exporter TauE/SafE BV122_216 PF01925 Sulfite exporter TauE/SafE BV122_217 PF03279 Bacterial lipid A biosynthesis acyltransferase BV122_218 PF00586 AIR synthase related protein, N-terminal domain BV122_218 PF02769 AIR synthase related protein, C-terminal domain BV122_219 PF01245 Ribosomal protein L19 BV122_22 PF00939 Sodium:sulfate symporter transmembrane region BV122_220 PF01746 tRNA (Guanine-1)-methyltransferase BV122_221 PF01782 RimM N-terminal domain BV122_221 PF05239 PRC-barrel domain BV122_222 PF00886 Ribosomal protein S16 BV122_224 PF00149 Calcineurin-like phosphoesterase BV122_224 PF02872 5'-nucleotidase, C-terminal domain BV122_225 PF01202 Shikimate kinase BV122_226 PF01761 3-dehydroquinate synthase BV122_227 PF02086 D12 class N6 adenine-specific DNA methyltransferase BV122_228 PF01569 PAP2 superfamily BV122_229 PF00925 GTP cyclohydrolase II BV122_23 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BV122_23 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BV122_230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BV122_231 PF04304 Protein of unknown function (DUF454) BV122_232 PF01432 Peptidase family M3 BV122_233 PF12161 HsdM N-terminal domain BV122_233 PF02384 N-6 DNA Methylase BV122_234 PF01420 Type I restriction modification DNA specificity domain BV122_237 PF12008 Type I restriction and modification enzyme - subunit R C terminal BV122_237 PF18766 SWI2/SNF2 ATPase BV122_237 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BV122_238 PF04224 Protein of unknown function, DUF417 BV122_239 PF18415 Histidine kinase receptor ArcB trans-membrane domain BV122_239 PF00512 His Kinase A (phospho-acceptor) domain BV122_239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BV122_24 PF04223 Citrate lyase, alpha subunit (CitF) BV122_240 PF03167 Uracil DNA glycosylase superfamily BV122_246 PF02237 Biotin protein ligase C terminal domain BV122_246 PF03099 Biotin/lipoate A/B protein ligase family BV122_247 PF00478 IMP dehydrogenase / GMP reductase domain BV122_247 PF00571 CBS domain BV122_248 PF00117 Glutamine amidotransferase class-I BV122_248 PF00958 GMP synthase C terminal domain BV122_248 PF02540 NAD synthase BV122_249 PF00892 EamA-like transporter family BV122_25 PF03328 HpcH/HpaI aldolase/citrate lyase family BV122_250 PF01037 Lrp/AsnC ligand binding domain BV122_251 PF06965 Na+/H+ antiporter 1 BV122_253 PF05525 Branched-chain amino acid transport protein BV122_254 PF04074 YhcH/YjgK/YiaL BV122_256 PF00013 KH domain BV122_256 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BV122_256 PF00575 S1 RNA binding domain BV122_256 PF01138 3' exoribonuclease family, domain 1 BV122_256 PF03725 3' exoribonuclease family, domain 2 BV122_258 PF00270 DEAD/DEAH box helicase BV122_258 PF00271 Helicase conserved C-terminal domain BV122_258 PF03880 DbpA RNA binding domain BV122_259 PF00497 Bacterial extracellular solute-binding proteins, family 3 BV122_259 PF01464 Transglycosylase SLT domain BV122_26 PF06857 Malonate decarboxylase delta subunit (MdcD) BV122_260 PF01464 Transglycosylase SLT domain BV122_260 PF00497 Bacterial extracellular solute-binding proteins, family 3 BV122_262 PF17347 Family of unknown function (DUF5377) BV122_263 PF03889 Alternative ribosome-rescue factor A BV122_264 PF03960 ArsC family BV122_265 PF01594 AI-2E family transporter BV122_266 PF07549 SecD/SecF GG Motif BV122_266 PF02355 Protein export membrane protein BV122_267 PF02355 Protein export membrane protein BV122_267 PF07549 SecD/SecF GG Motif BV122_267 PF13721 SecD export protein N-terminal TM region BV122_268 PF02699 Preprotein translocase subunit BV122_269 PF01206 Sulfurtransferase TusA BV122_27 PF08218 Citrate lyase ligase C-terminal domain BV122_270 PF01814 Hemerythrin HHE cation binding domain BV122_271 PF01702 Queuine tRNA-ribosyltransferase BV122_272 PF02547 Queuosine biosynthesis protein BV122_274 PF03212 Pertactin BV122_274 PF02395 Immunoglobulin A1 protease BV122_275 PF17760 UvrA interaction domain BV122_275 PF17755 UvrA DNA-binding domain BV122_276 PF00436 Single-strand binding protein family BV122_277 PF03544 Gram-negative bacterial TonB protein C-terminal BV122_278 PF02472 Biopolymer transport protein ExbD/TolR BV122_28 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BV122_28 PF04055 Radical SAM superfamily BV122_280 PF01618 MotA/TolQ/ExbB proton channel family BV122_281 PF00578 AhpC/TSA family BV122_282 PF00701 Dihydrodipicolinate synthetase family BV122_283 PF06804 NlpB/DapX lipoprotein BV122_284 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BV122_287 PF01501 Glycosyl transferase family 8 BV122_288 PF01725 Ham1 family BV122_29 PF03099 Biotin/lipoate A/B protein ligase family BV122_290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BV122_291 PF00593 TonB dependent receptor BV122_291 PF07715 TonB-dependent Receptor Plug Domain BV122_292 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BV122_292 PF08479 POTRA domain, ShlB-type BV122_293 PF05860 haemagglutination activity domain BV122_294 PF02152 Dihydroneopterin aldolase BV122_295 PF02660 Glycerol-3-phosphate acyltransferase BV122_296 PF00672 HAMP domain BV122_296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BV122_296 PF07730 Histidine kinase BV122_296 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BV122_297 PF01565 FAD binding domain BV122_297 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BV122_298 PF00140 Sigma-70 factor, region 1.2 BV122_298 PF04542 Sigma-70 region 2 BV122_298 PF04545 Sigma-70, region 4 BV122_299 PF01207 Dihydrouridine synthase (Dus) BV122_30 PF04359 Protein of unknown function (DUF493) BV122_300 PF05099 Tellurite resistance protein TerB BV122_300 PF00226 DnaJ domain BV122_301 PF00156 Phosphoribosyl transferase domain BV122_302 PF01138 3' exoribonuclease family, domain 1 BV122_302 PF03725 3' exoribonuclease family, domain 2 BV122_304 PF00749 tRNA synthetases class I (E and Q), catalytic domain BV122_309 PF00884 Sulfatase BV122_31 PF07943 Penicillin-binding protein 5, C-terminal domain BV122_31 PF00768 D-alanyl-D-alanine carboxypeptidase BV122_310 PF03631 Virulence factor BrkB BV122_311 PF02810 SEC-C motif BV122_312 PF03473 MOSC domain BV122_313 PF01048 Phosphorylase superfamily BV122_314 PF07690 Major Facilitator Superfamily BV122_315 PF00561 alpha/beta hydrolase fold BV122_316 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BV122_316 PF16582 Middle domain of thiamine pyrophosphate BV122_316 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BV122_317 PF00425 chorismate binding enzyme BV122_318 PF00155 Aminotransferase class I and II BV122_319 PF03222 Tryptophan/tyrosine permease family BV122_32 PF03330 Lytic transglycolase BV122_32 PF05036 Sporulation related domain BV122_320 PF03315 Serine dehydratase beta chain BV122_320 PF03313 Serine dehydratase alpha chain BV122_321 PF03222 Tryptophan/tyrosine permease family BV122_322 PF00403 Heavy-metal-associated domain BV122_323 PF00403 Heavy-metal-associated domain BV122_324 PF00403 Heavy-metal-associated domain BV122_325 PF00403 Heavy-metal-associated domain BV122_326 PF00403 Heavy-metal-associated domain BV122_327 PF09278 MerR, DNA binding BV122_327 PF00376 MerR family regulatory protein BV122_328 PF01340 Met Apo-repressor, MetJ BV122_329 PF07497 Rho termination factor, RNA-binding domain BV122_329 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BV122_329 PF07498 Rho termination factor, N-terminal domain BV122_33 PF01098 Cell cycle protein BV122_330 PF01478 Type IV leader peptidase family BV122_331 PF00482 Type II secretion system (T2SS), protein F BV122_332 PF00437 Type II/IV secretion system protein BV122_332 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BV122_333 PF07963 Prokaryotic N-terminal methylation motif BV122_334 PF01510 N-acetylmuramoyl-L-alanine amidase BV122_335 PF00571 CBS domain BV122_335 PF03471 Transporter associated domain BV122_336 PF00795 Carbon-nitrogen hydrolase BV122_337 PF04452 RNA methyltransferase BV122_338 PF02622 Uncharacterized ACR, COG1678 BV122_339 PF03652 Holliday junction resolvase BV122_34 PF03717 Penicillin-binding Protein dimerisation domain BV122_34 PF00905 Penicillin binding protein transpeptidase domain BV122_340 PF04381 Putative exonuclease, RdgC BV122_341 PF04381 Putative exonuclease, RdgC BV122_342 PF14748 Pyrroline-5-carboxylate reductase dimerisation BV122_342 PF03807 NADP oxidoreductase coenzyme F420-dependent BV122_343 PF12832 MFS_1 like family BV122_344 PF00589 Phage integrase family BV122_344 PF02899 Phage integrase, N-terminal SAM-like domain BV122_345 PF17274 Family of unknown function (DUF5339) BV122_346 PF05496 Holliday junction DNA helicase RuvB P-loop domain BV122_346 PF05491 RuvB C-terminal winged helix domain BV122_346 PF17864 RuvB AAA lid domain BV122_347 PF01330 RuvA N terminal domain BV122_347 PF07499 RuvA, C-terminal domain BV122_348 PF02075 Crossover junction endodeoxyribonuclease RuvC BV122_349 PF01709 Transcriptional regulator BV122_35 PF02590 Predicted SPOUT methyltransferase BV122_350 PF00293 NUDIX domain BV122_351 PF02938 GAD domain BV122_351 PF00152 tRNA synthetases class II (D, K and N) BV122_351 PF01336 OB-fold nucleic acid binding domain BV122_353 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BV122_354 PF13649 Methyltransferase domain BV122_355 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BV122_356 PF01850 PIN domain BV122_357 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BV122_358 PF00929 Exonuclease BV122_359 PF03553 Na+/H+ antiporter family BV122_359 PF13726 Na+-H+ antiporter family BV122_360 PF07445 Primosomal replication protein priC BV122_362 PF08207 Elongation factor P (EF-P) KOW-like domain BV122_362 PF01132 Elongation factor P (EF-P) OB domain BV122_362 PF09285 Elongation factor P, C-terminal BV122_363 PF04055 Radical SAM superfamily BV122_364 PF08525 Opacity-associated protein A N-terminal motif BV122_364 PF04225 Opacity-associated protein A LysM-like domain BV122_365 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme BV122_366 PF02565 Recombination protein O C terminal BV122_366 PF11967 Recombination protein O N terminal BV122_367 PF01938 TRAM domain BV122_367 PF05958 tRNA (Uracil-5-)-methyltransferase BV122_368 PF13291 ACT domain BV122_368 PF04607 Region found in RelA / SpoT proteins BV122_368 PF02824 TGS domain BV122_369 PF01219 Prokaryotic diacylglycerol kinase BV122_37 PF02080 TrkA-C domain BV122_37 PF06826 Predicted Permease Membrane Region BV122_370 PF00994 Probable molybdopterin binding domain BV122_371 PF00543 Nitrogen regulatory protein P-II BV122_372 PF01594 AI-2E family transporter BV122_373 PF00270 DEAD/DEAH box helicase BV122_373 PF17764 3′ DNA-binding domain (3′BD) BV122_373 PF18074 Primosomal protein N C-terminal domain BV122_373 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BV122_373 PF00271 Helicase conserved C-terminal domain BV122_374 PF02390 Putative methyltransferase BV122_375 PF04320 Protein with unknown function (DUF469) BV122_376 PF13187 4Fe-4S dicluster domain BV122_376 PF12838 4Fe-4S dicluster domain BV122_377 PF03927 NapD protein BV122_378 PF10518 TAT (twin-arginine translocation) pathway signal sequence BV122_378 PF01568 Molydopterin dinucleotide binding domain BV122_378 PF00384 Molybdopterin oxidoreductase BV122_378 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BV122_379 PF12800 4Fe-4S binding domain BV122_379 PF12838 4Fe-4S dicluster domain BV122_38 PF00005 ABC transporter BV122_38 PF06472 ABC transporter transmembrane region 2 BV122_380 PF12801 4Fe-4S binding domain BV122_380 PF12837 4Fe-4S binding domain BV122_381 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BV122_382 PF03264 NapC/NirT cytochrome c family, N-terminal region BV122_383 PF05191 Adenylate kinase, active site lid BV122_384 PF07690 Major Facilitator Superfamily BV122_386 PF01370 NAD dependent epimerase/dehydratase family BV122_387 PF06002 Alpha-2,3-sialyltransferase (CST-I) BV122_388 PF00005 ABC transporter BV122_389 PF00528 Binding-protein-dependent transport system inner membrane component BV122_390 PF09084 NMT1/THI5 like BV122_391 PF03070 TENA/THI-4/PQQC family BV122_392 PF00950 ABC 3 transport family BV122_393 PF00950 ABC 3 transport family BV122_394 PF00005 ABC transporter BV122_395 PF01297 Zinc-uptake complex component A periplasmic BV122_396 PF00768 D-alanyl-D-alanine carboxypeptidase BV122_398 PF04055 Radical SAM superfamily BV122_4 PF02130 Uncharacterized protein family UPF0054 BV122_40 PF04085 rod shape-determining protein MreC BV122_400 PF13464 Domain of unknown function (DUF4115) BV122_401 PF04551 GcpE protein BV122_402 PF03129 Anticodon binding domain BV122_402 PF13393 Histidyl-tRNA synthetase BV122_403 PF09976 Tetratricopeptide repeat-like domain BV122_404 PF04384 Iron-sulphur cluster assembly BV122_405 PF00111 2Fe-2S iron-sulfur cluster binding domain BV122_406 PF00012 Hsp70 protein BV122_407 PF10946 Protein of unknown function DUF2625 BV122_408 PF07743 HSCB C-terminal oligomerisation domain BV122_409 PF01521 Iron-sulphur cluster biosynthesis BV122_41 PF04093 rod shape-determining protein MreD BV122_410 PF01592 NifU-like N terminal domain BV122_411 PF00266 Aminotransferase class-V BV122_412 PF02082 Transcriptional regulator BV122_413 PF00588 SpoU rRNA Methylase family BV122_42 PF06877 Regulator of ribonuclease activity B BV122_42 PF05117 Family of unknown function (DUF695) BV122_423 PF02498 BRO family, N-terminal domain BV122_423 PF10548 P22AR C-terminal domain BV122_43 PF03372 Endonuclease/Exonuclease/phosphatase family BV122_44 PF00849 RNA pseudouridylate synthase BV122_444 PF10828 Protein of unknown function (DUF2570) BV122_445 PF00182 Chitinase class I BV122_446 PF05106 Phage holin family (Lysis protein S) BV122_45 PF05128 Domain of unknown function (DUF697) BV122_46 PF01027 Inhibitor of apoptosis-promoting Bax1 BV122_460 PF10548 P22AR C-terminal domain BV122_460 PF02498 BRO family, N-terminal domain BV122_463 PF03837 RecT family BV122_465 PF00436 Single-strand binding protein family BV122_470 PF00145 C-5 cytosine-specific DNA methylase BV122_472 PF00589 Phage integrase family BV122_474 PF00691 OmpA family BV122_475 PF04052 TolB amino-terminal domain BV122_475 PF07676 WD40-like Beta Propeller Repeat BV122_476 PF06519 TolA C-terminal BV122_477 PF02472 Biopolymer transport protein ExbD/TolR BV122_478 PF01618 MotA/TolQ/ExbB proton channel family BV122_479 PF03061 Thioesterase superfamily BV122_48 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BV122_480 PF13307 Helicase C-terminal domain BV122_480 PF06733 DEAD_2 BV122_481 PF00814 Glycoprotease family BV122_482 PF03843 Outer membrane lipoprotein Slp family BV122_483 PF13193 AMP-binding enzyme C-terminal domain BV122_483 PF00501 AMP-binding enzyme BV122_484 PF00570 HRDC domain BV122_484 PF01612 3'-5' exonuclease BV122_486 PF01757 Acyltransferase family BV122_487 PF01926 50S ribosome-binding GTPase BV122_487 PF06071 Protein of unknown function (DUF933) BV122_488 PF01195 Peptidyl-tRNA hydrolase BV122_489 PF03658 RnfH family Ubiquitin BV122_49 PF03831 PhnA domain BV122_49 PF08274 PhnA Zinc-Ribbon BV122_490 PF08007 Cupin superfamily protein BV122_491 PF13742 OB-fold nucleic acid binding domain BV122_491 PF02601 Exonuclease VII, large subunit BV122_492 PF00293 NUDIX domain BV122_493 PF00149 Calcineurin-like phosphoesterase BV122_494 PF04175 Protein of unknown function (DUF406) BV122_495 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BV122_496 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BV122_496 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BV122_497 PF02976 DNA mismatch repair enzyme MutH BV122_498 PF01171 PP-loop family BV122_498 PF09179 TilS substrate binding domain BV122_498 PF11734 TilS substrate C-terminal domain BV122_499 PF08543 Phosphomethylpyrimidine kinase BV122_5 PF02634 FdhD/NarQ family BV122_50 PF01081 KDPG and KHG aldolase BV122_500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BV122_501 PF00950 ABC 3 transport family BV122_502 PF00005 ABC transporter BV122_503 PF01551 Peptidase family M23 BV122_503 PF04225 Opacity-associated protein A LysM-like domain BV122_504 PF18024 Helix-turn-helix domain BV122_504 PF00158 Sigma-54 interaction domain BV122_505 PF17209 Hfq protein BV122_506 PF01479 S4 domain BV122_506 PF00849 RNA pseudouridylate synthase BV122_508 PF10150 Ribonuclease E/G family BV122_508 PF12111 Polyribonucleotide phosphorylase C terminal BV122_508 PF00575 S1 RNA binding domain BV122_509 PF02462 Opacity family porin protein BV122_51 PF00106 short chain dehydrogenase BV122_510 PF02110 Hydroxyethylthiazole kinase family BV122_511 PF08543 Phosphomethylpyrimidine kinase BV122_512 PF02581 Thiamine monophosphate synthase BV122_513 PF00083 Sugar (and other) transporter BV122_515 PF00271 Helicase conserved C-terminal domain BV122_515 PF00270 DEAD/DEAH box helicase BV122_516 PF05175 Methyltransferase small domain BV122_517 PF08032 RNA 2'-O ribose methyltransferase substrate binding BV122_517 PF00588 SpoU rRNA Methylase family BV122_518 PF13091 PLD-like domain BV122_519 PF07840 FadR C-terminal domain BV122_519 PF00392 Bacterial regulatory proteins, gntR family BV122_52 PF00294 pfkB family carbohydrate kinase BV122_520 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BV122_521 PF02600 Disulfide bond formation protein DsbB BV122_522 PF01380 SIS domain BV122_523 PF00216 Bacterial DNA-binding protein BV122_524 PF04222 Protein of unknown function (DUF416) BV122_525 PF09297 NADH pyrophosphatase zinc ribbon domain BV122_525 PF00293 NUDIX domain BV122_526 PF01521 Iron-sulphur cluster biosynthesis BV122_526 PF01106 NifU-like domain BV122_527 PF00156 Phosphoribosyl transferase domain BV122_528 PF00263 Bacterial type II and III secretion system protein BV122_528 PF03958 Bacterial type II/III secretion system short domain BV122_529 PF04351 Pilus assembly protein, PilP BV122_53 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BV122_532 PF11104 Type IV pilus assembly protein PilM; BV122_533 PF17092 Penicillin-binding protein OB-like domain BV122_533 PF00905 Penicillin binding protein transpeptidase domain BV122_533 PF00912 Transglycosylase BV122_534 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BV122_536 PF02575 YbaB/EbfC DNA-binding family BV122_537 PF02132 RecR protein BV122_537 PF13662 Toprim domain BV122_538 PF01751 Toprim domain BV122_538 PF01131 DNA topoisomerase BV122_539 PF03840 Preprotein translocase SecG subunit BV122_54 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BV122_541 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BV122_542 PF00294 pfkB family carbohydrate kinase BV122_543 PF00381 PTS HPr component phosphorylation site BV122_543 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BV122_545 PF03471 Transporter associated domain BV122_545 PF01595 Cyclin M transmembrane N-terminal domain BV122_545 PF00571 CBS domain BV122_546 PF07509 Protein of unknown function (DUF1523) BV122_547 PF01026 TatD related DNase BV122_548 PF09115 DNA polymerase III, delta subunit, C terminal BV122_55 PF03480 Bacterial extracellular solute-binding protein, family 7 BV122_552 PF03797 Autotransporter beta-domain BV122_554 PF02223 Thymidylate kinase BV122_555 PF02618 YceG-like family BV122_556 PF09312 SurA N-terminal domain BV122_556 PF00639 PPIC-type PPIASE domain BV122_557 PF00156 Phosphoribosyl transferase domain BV122_558 PF03819 MazG nucleotide pyrophosphohydrolase domain BV122_559 PF04393 Protein of unknown function (DUF535) BV122_56 PF00107 Zinc-binding dehydrogenase BV122_56 PF08240 Alcohol dehydrogenase GroES-like domain BV122_560 PF00004 ATPase family associated with various cellular activities (AAA) BV122_560 PF05362 Lon protease (S16) C-terminal proteolytic domain BV122_560 PF02190 ATP-dependent protease La (LON) substrate-binding domain BV122_561 PF06969 HemN C-terminal domain BV122_561 PF04055 Radical SAM superfamily BV122_562 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BV122_563 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BV122_563 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BV122_564 PF01571 Aminomethyltransferase folate-binding domain BV122_565 PF03755 YicC-like family, N-terminal region BV122_565 PF08340 Domain of unknown function (DUF1732) BV122_566 PF08029 HisG, C-terminal domain BV122_566 PF01634 ATP phosphoribosyltransferase BV122_567 PF00815 Histidinol dehydrogenase BV122_568 PF00155 Aminotransferase class I and II BV122_569 PF00475 Imidazoleglycerol-phosphate dehydratase BV122_57 PF00392 Bacterial regulatory proteins, gntR family BV122_57 PF07729 FCD domain BV122_570 PF00117 Glutamine amidotransferase class-I BV122_571 PF00977 Histidine biosynthesis protein BV122_572 PF00977 Histidine biosynthesis protein BV122_573 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BV122_573 PF01502 Phosphoribosyl-AMP cyclohydrolase BV122_574 PF03222 Tryptophan/tyrosine permease family BV122_575 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BV122_576 PF02874 ATP synthase alpha/beta family, beta-barrel domain BV122_576 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BV122_577 PF00231 ATP synthase BV122_578 PF02874 ATP synthase alpha/beta family, beta-barrel domain BV122_578 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BV122_578 PF00306 ATP synthase alpha/beta chain, C terminal domain BV122_579 PF00213 ATP synthase delta (OSCP) subunit BV122_58 PF03786 D-mannonate dehydratase (UxuA) BV122_580 PF00430 ATP synthase B/B' CF(0) BV122_581 PF00137 ATP synthase subunit C BV122_582 PF00119 ATP synthase A chain BV122_583 PF03899 ATP synthase I chain BV122_584 PF02527 rRNA small subunit methyltransferase G BV122_585 PF00874 PRD domain BV122_587 PF13419 Haloacid dehalogenase-like hydrolase BV122_589 PF02664 S-Ribosylhomocysteinase (LuxS) BV122_59 PF03741 Integral membrane protein TerC family BV122_590 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BV122_591 PF00227 Proteasome subunit BV122_592 PF00004 ATPase family associated with various cellular activities (AAA) BV122_592 PF10431 C-terminal, D2-small domain, of ClpB protein BV122_592 PF07724 AAA domain (Cdc48 subfamily) BV122_593 PF13416 Bacterial extracellular solute-binding protein BV122_594 PF01266 FAD dependent oxidoreductase BV122_595 PF02646 RmuC family BV122_596 PF05025 RbsD / FucU transport protein family BV122_597 PF00005 ABC transporter BV122_598 PF02653 Branched-chain amino acid transport system / permease component BV122_599 PF13407 Periplasmic binding protein domain BV122_6 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BV122_6 PF00384 Molybdopterin oxidoreductase BV122_6 PF01568 Molydopterin dinucleotide binding domain BV122_60 PF01541 GIY-YIG catalytic domain BV122_60 PF02151 UvrB/uvrC motif BV122_60 PF08459 UvrC Helix-hairpin-helix N-terminal BV122_600 PF00294 pfkB family carbohydrate kinase BV122_601 PF00356 Bacterial regulatory proteins, lacI family BV122_602 PF03350 Uncharacterized protein family, UPF0114 BV122_603 PF03737 Aldolase/RraA BV122_604 PF01040 UbiA prenyltransferase family BV122_605 PF18389 TrmO C-terminal domain BV122_605 PF01980 tRNA-methyltransferase O BV122_606 PF03595 Voltage-dependent anion channel BV122_607 PF05000 RNA polymerase Rpb1, domain 4 BV122_607 PF04997 RNA polymerase Rpb1, domain 1 BV122_607 PF00623 RNA polymerase Rpb1, domain 2 BV122_607 PF04983 RNA polymerase Rpb1, domain 3 BV122_607 PF04998 RNA polymerase Rpb1, domain 5 BV122_608 PF10385 RNA polymerase beta subunit external 1 domain BV122_608 PF00562 RNA polymerase Rpb2, domain 6 BV122_608 PF04563 RNA polymerase beta subunit BV122_608 PF04565 RNA polymerase Rpb2, domain 3 BV122_608 PF04560 RNA polymerase Rpb2, domain 7 BV122_608 PF04561 RNA polymerase Rpb2, domain 2 BV122_609 PF00687 Ribosomal protein L1p/L10e family BV122_61 PF02348 Cytidylyltransferase BV122_610 PF03946 Ribosomal protein L11, N-terminal domain BV122_610 PF00298 Ribosomal protein L11, RNA binding domain BV122_611 PF01048 Phosphorylase superfamily BV122_612 PF07662 Na+ dependent nucleoside transporter C-terminus BV122_612 PF01773 Na+ dependent nucleoside transporter N-terminus BV122_612 PF07670 Nucleoside recognition BV122_613 PF04055 Radical SAM superfamily BV122_614 PF11230 Protein of unknown function (DUF3029) BV122_615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BV122_617 PF01116 Fructose-bisphosphate aldolase class-II BV122_618 PF00162 Phosphoglycerate kinase BV122_619 PF00445 Ribonuclease T2 family BV122_62 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BV122_620 PF00037 4Fe-4S binding domain BV122_621 PF03222 Tryptophan/tyrosine permease family BV122_622 PF00265 Thymidine kinase BV122_623 PF00814 Glycoprotease family BV122_624 PF01165 Ribosomal protein S21 BV122_625 PF08275 DNA primase catalytic core, N-terminal domain BV122_625 PF08278 DNA primase DnaG DnaB-binding BV122_625 PF01807 CHC2 zinc finger BV122_625 PF10410 DnaB-helicase binding domain of primase BV122_626 PF04539 Sigma-70 region 3 BV122_626 PF00140 Sigma-70 factor, region 1.2 BV122_626 PF04542 Sigma-70 region 2 BV122_626 PF04545 Sigma-70, region 4 BV122_626 PF03979 Sigma-70 factor, region 1.1 BV122_626 PF04546 Sigma-70, non-essential region BV122_628 PF00206 Lyase BV122_628 PF10415 Fumarase C C-terminus BV122_629 PF01774 UreD urease accessory protein BV122_63 PF00664 ABC transporter transmembrane region BV122_63 PF00005 ABC transporter BV122_630 PF02492 CobW/HypB/UreG, nucleotide-binding domain BV122_631 PF01730 UreF BV122_632 PF02814 UreE urease accessory protein, N-terminal domain BV122_632 PF05194 UreE urease accessory protein, C-terminal domain BV122_633 PF01979 Amidohydrolase family BV122_633 PF00449 Urease alpha-subunit, N-terminal domain BV122_634 PF00699 Urease beta subunit BV122_635 PF00547 Urease, gamma subunit BV122_636 PF00166 Chaperonin 10 Kd subunit BV122_637 PF00118 TCP-1/cpn60 chaperonin family BV122_638 PF01281 Ribosomal protein L9, N-terminal domain BV122_638 PF03948 Ribosomal protein L9, C-terminal domain BV122_639 PF01084 Ribosomal protein S18 BV122_64 PF13567 Domain of unknown function (DUF4131) BV122_64 PF03772 Competence protein BV122_64 PF00753 Metallo-beta-lactamase superfamily BV122_640 PF00436 Single-strand binding protein family BV122_641 PF01250 Ribosomal protein S6 BV122_642 PF01176 Translation initiation factor 1A / IF-1 BV122_645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BV122_646 PF00398 Ribosomal RNA adenine dimethylase BV122_647 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BV122_648 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BV122_649 PF00149 Calcineurin-like phosphoesterase BV122_65 PF01258 Prokaryotic dksA/traR C4-type zinc finger BV122_650 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) BV122_651 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BV122_651 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BV122_653 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BV122_654 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BV122_654 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BV122_655 PF00459 Inositol monophosphatase family BV122_657 PF03169 OPT oligopeptide transporter protein BV122_658 PF01479 S4 domain BV122_659 PF13404 AsnC-type helix-turn-helix domain BV122_659 PF01037 Lrp/AsnC ligand binding domain BV122_66 PF12627 Probable RNA and SrmB- binding site of polymerase A BV122_66 PF12626 Polymerase A arginine-rich C-terminus BV122_66 PF01743 Poly A polymerase head domain BV122_660 PF03590 Aspartate-ammonia ligase BV122_661 PF00665 Integrase core domain BV122_661 PF13333 Integrase core domain BV122_665 PF13419 Haloacid dehalogenase-like hydrolase BV122_666 PF00834 Ribulose-phosphate 3 epimerase family BV122_667 PF18053 DNA gyrase B subunit insert domain BV122_667 PF01751 Toprim domain BV122_667 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BV122_667 PF00204 DNA gyrase B BV122_667 PF00986 DNA gyrase B subunit, carboxyl terminus BV122_668 PF09371 Tex-like protein N-terminal domain BV122_668 PF00575 S1 RNA binding domain BV122_668 PF17674 HHH domain BV122_668 PF16921 Tex protein YqgF-like domain BV122_669 PF01272 Transcription elongation factor, GreA/GreB, C-term BV122_669 PF03449 Transcription elongation factor, N-terminal BV122_67 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BV122_670 PF00440 Bacterial regulatory proteins, tetR family BV122_671 PF03466 LysR substrate binding domain BV122_671 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_672 PF00462 Glutaredoxin BV122_672 PF08534 Redoxin BV122_673 PF04102 SlyX BV122_674 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BV122_674 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BV122_675 PF13309 HTH domain BV122_675 PF08348 YheO-like PAS domain BV122_676 PF02635 DsrE/DsrF-like family BV122_677 PF02635 DsrE/DsrF-like family BV122_678 PF04077 DsrH like protein BV122_679 PF00009 Elongation factor Tu GTP binding domain BV122_679 PF03144 Elongation factor Tu domain 2 BV122_679 PF03143 Elongation factor Tu C-terminal domain BV122_68 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BV122_680 PF14492 Elongation Factor G, domain II BV122_680 PF03764 Elongation factor G, domain IV BV122_680 PF00009 Elongation factor Tu GTP binding domain BV122_680 PF03144 Elongation factor Tu domain 2 BV122_680 PF00679 Elongation factor G C-terminus BV122_681 PF00177 Ribosomal protein S7p/S5e BV122_682 PF00164 Ribosomal protein S12/S23 BV122_683 PF13932 GidA associated domain BV122_683 PF01134 Glucose inhibited division protein A BV122_685 PF00149 Calcineurin-like phosphoesterase BV122_685 PF02872 5'-nucleotidase, C-terminal domain BV122_686 PF01546 Peptidase family M20/M25/M40 BV122_686 PF07687 Peptidase dimerisation domain BV122_687 PF03606 C4-dicarboxylate anaerobic carrier BV122_688 PF03575 Peptidase family S51 BV122_689 PF00593 TonB dependent receptor BV122_689 PF04886 PT repeat BV122_689 PF07715 TonB-dependent Receptor Plug Domain BV122_69 PF01476 LysM domain BV122_69 PF01520 N-acetylmuramoyl-L-alanine amidase BV122_690 PF03606 C4-dicarboxylate anaerobic carrier BV122_691 PF00696 Amino acid kinase family BV122_692 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BV122_692 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BV122_694 PF02631 RecX family BV122_695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BV122_696 PF00154 recA bacterial DNA recombination protein BV122_697 PF04993 TfoX N-terminal domain BV122_697 PF04994 TfoX C-terminal domain BV122_7 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BV122_7 PF00384 Molybdopterin oxidoreductase BV122_7 PF01568 Molydopterin dinucleotide binding domain BV122_70 PF01119 DNA mismatch repair protein, C-terminal domain BV122_70 PF08676 MutL C terminal dimerisation domain BV122_704 PF01327 Polypeptide deformylase BV122_705 PF02911 Formyl transferase, C-terminal domain BV122_705 PF00551 Formyl transferase BV122_706 PF01189 16S rRNA methyltransferase RsmB/F BV122_706 PF01029 NusB family BV122_707 PF02080 TrkA-C domain BV122_707 PF02254 TrkA-N domain BV122_708 PF01741 Large-conductance mechanosensitive channel, MscL BV122_709 PF03937 Flavinator of succinate dehydrogenase BV122_710 PF08281 Sigma-70, region 4 BV122_710 PF04542 Sigma-70 region 2 BV122_711 PF03873 Anti sigma-E protein RseA, C-terminal domain BV122_711 PF03872 Anti sigma-E protein RseA, N-terminal domain BV122_712 PF17188 MucB/RseB C-terminal domain BV122_712 PF03888 MucB/RseB N-terminal domain BV122_713 PF00485 Phosphoribulokinase / Uridine kinase family BV122_718 PF03143 Elongation factor Tu C-terminal domain BV122_718 PF00009 Elongation factor Tu GTP binding domain BV122_718 PF03144 Elongation factor Tu domain 2 BV122_72 PF03710 Glutamate-ammonia ligase adenylyltransferase BV122_72 PF08335 GlnD PII-uridylyltransferase BV122_721 PF00654 Voltage gated chloride channel BV122_722 PF01207 Dihydrouridine synthase (Dus) BV122_723 PF04175 Protein of unknown function (DUF406) BV122_724 PF00579 tRNA synthetases class I (W and Y) BV122_725 PF04356 Protein of unknown function (DUF489) BV122_726 PF08328 Adenylosuccinate lyase C-terminal BV122_726 PF00206 Lyase BV122_727 PF00466 Ribosomal protein L10 BV122_728 PF00542 Ribosomal protein L7/L12 C-terminal domain BV122_728 PF16320 Ribosomal protein L7/L12 dimerisation domain BV122_729 PF12804 MobA-like NTP transferase domain BV122_729 PF00132 Bacterial transferase hexapeptide (six repeats) BV122_73 PF02463 RecF/RecN/SMC N terminal domain BV122_730 PF17364 Family of unknown function (DUF5389) BV122_734 PF18364 Molybdopterin oxidoreductase N-terminal domain BV122_734 PF01568 Molydopterin dinucleotide binding domain BV122_734 PF00384 Molybdopterin oxidoreductase BV122_735 PF03264 NapC/NirT cytochrome c family, N-terminal region BV122_736 PF12146 Serine aminopeptidase, S33 BV122_737 PF01118 Semialdehyde dehydrogenase, NAD binding domain BV122_737 PF02774 Semialdehyde dehydrogenase, dimerisation domain BV122_738 PF02308 MgtC family BV122_739 PF02525 Flavodoxin-like fold BV122_74 PF01513 ATP-NAD kinase BV122_740 PF03466 LysR substrate binding domain BV122_740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_741 PF13361 UvrD-like helicase C-terminal domain BV122_741 PF00580 UvrD/REP helicase N-terminal domain BV122_742 PF07119 Protein of unknown function (DUF1375) BV122_743 PF01467 Cytidylyltransferase-like BV122_744 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BV122_744 PF00534 Glycosyl transferases group 1 BV122_745 PF03352 Methyladenine glycosylase BV122_746 PF00535 Glycosyl transferase family 2 BV122_748 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BV122_748 PF08501 Shikimate dehydrogenase substrate binding domain BV122_748 PF01488 Shikimate / quinate 5-dehydrogenase BV122_749 PF01300 Telomere recombination BV122_75 PF01025 GrpE BV122_750 PF01396 Topoisomerase DNA binding C4 zinc finger BV122_753 PF04886 PT repeat BV122_753 PF07715 TonB-dependent Receptor Plug Domain BV122_753 PF00593 TonB dependent receptor BV122_754 PF00593 TonB dependent receptor BV122_754 PF07715 TonB-dependent Receptor Plug Domain BV122_754 PF04886 PT repeat BV122_755 PF00005 ABC transporter BV122_755 PF00664 ABC transporter transmembrane region BV122_756 PF00664 ABC transporter transmembrane region BV122_756 PF00005 ABC transporter BV122_757 PF07804 HipA-like C-terminal domain BV122_758 PF13657 HipA N-terminal domain BV122_759 PF01381 Helix-turn-helix BV122_76 PF01909 Nucleotidyltransferase domain BV122_760 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BV122_761 PF06005 Cell division protein ZapB BV122_762 PF00258 Flavodoxin BV122_763 PF02580 D-Tyr-tRNA(Tyr) deacylase BV122_764 PF02542 YgbB family BV122_765 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BV122_766 PF04977 Septum formation initiator BV122_767 PF00156 Phosphoribosyl transferase domain BV122_768 PF01546 Peptidase family M20/M25/M40 BV122_768 PF07687 Peptidase dimerisation domain BV122_769 PF02899 Phage integrase, N-terminal SAM-like domain BV122_769 PF00589 Phage integrase family BV122_77 PF08780 Nucleotidyltransferase substrate binding protein like BV122_771 PF00121 Triosephosphate isomerase BV122_773 PF00581 Rhodanese-like domain BV122_774 PF00892 EamA-like transporter family BV122_775 PF03466 LysR substrate binding domain BV122_775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_776 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BV122_776 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BV122_777 PF13183 4Fe-4S dicluster domain BV122_777 PF02754 Cysteine-rich domain BV122_778 PF00890 FAD binding domain BV122_779 PF04324 BFD-like [2Fe-2S] binding domain BV122_779 PF01266 FAD dependent oxidoreductase BV122_78 PF03477 ATP cone domain BV122_78 PF13597 Anaerobic ribonucleoside-triphosphate reductase BV122_780 PF07690 Major Facilitator Superfamily BV122_781 PF03009 Glycerophosphoryl diester phosphodiesterase family BV122_782 PF00230 Major intrinsic protein BV122_783 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BV122_783 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BV122_784 PF00156 Phosphoribosyl transferase domain BV122_785 PF03009 Glycerophosphoryl diester phosphodiesterase family BV122_786 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BV122_787 PF00849 RNA pseudouridylate synthase BV122_788 PF02541 Ppx/GppA phosphatase family BV122_789 PF04357 TamB, inner membrane protein subunit of TAM complex BV122_79 PF02551 Acyl-CoA thioesterase BV122_790 PF01103 Surface antigen BV122_790 PF17243 POTRA domain TamA domain 1 BV122_791 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BV122_792 PF06877 Regulator of ribonuclease activity B BV122_793 PF01142 tRNA pseudouridine synthase D (TruD) BV122_794 PF01975 Survival protein SurE BV122_795 PF09335 SNARE associated Golgi protein BV122_798 PF01551 Peptidase family M23 BV122_798 PF01476 LysM domain BV122_799 PF01212 Beta-eliminating lyase BV122_8 PF13247 4Fe-4S dicluster domain BV122_8 PF09163 Formate dehydrogenase N, transmembrane BV122_80 PF09190 DALR domain BV122_80 PF01406 tRNA synthetases class I (C) catalytic domain BV122_801 PF03222 Tryptophan/tyrosine permease family BV122_802 PF05192 MutS domain III BV122_802 PF05188 MutS domain II BV122_802 PF00488 MutS domain V BV122_802 PF05190 MutS family domain IV BV122_802 PF01624 MutS domain I BV122_804 PF12390 Selenocysteine synthase N terminal BV122_804 PF03841 L-seryl-tRNA selenium transferase BV122_805 PF09107 Elongation factor SelB, winged helix BV122_805 PF03144 Elongation factor Tu domain 2 BV122_805 PF00009 Elongation factor Tu GTP binding domain BV122_805 PF09106 Elongation factor SelB, winged helix BV122_807 PF00593 TonB dependent receptor BV122_807 PF04886 PT repeat BV122_807 PF07715 TonB-dependent Receptor Plug Domain BV122_808 PF05698 Bacterial trigger factor protein (TF) C-terminus BV122_808 PF05697 Bacterial trigger factor protein (TF) BV122_808 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BV122_809 PF00574 Clp protease BV122_81 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BV122_810 PF07724 AAA domain (Cdc48 subfamily) BV122_810 PF10431 C-terminal, D2-small domain, of ClpB protein BV122_810 PF06689 ClpX C4-type zinc finger BV122_811 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BV122_812 PF02357 Transcription termination factor nusG BV122_812 PF00467 KOW motif BV122_813 PF04333 MlaA lipoprotein BV122_814 PF01042 Endoribonuclease L-PSP BV122_815 PF01435 Peptidase family M48 BV122_816 PF01206 Sulfurtransferase TusA BV122_817 PF01205 Uncharacterized protein family UPF0029 BV122_817 PF09186 Domain of unknown function (DUF1949) BV122_818 PF02386 Cation transport protein BV122_827 PF06146 Phosphate-starvation-inducible E BV122_828 PF07219 HemY protein N-terminus BV122_829 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BV122_83 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BV122_830 PF12633 Adenylate cyclase NT domain BV122_830 PF01295 Adenylate cyclase, class-I BV122_831 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BV122_831 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BV122_832 PF00132 Bacterial transferase hexapeptide (six repeats) BV122_832 PF06426 Serine acetyltransferase, N-terminal BV122_833 PF08501 Shikimate dehydrogenase substrate binding domain BV122_834 PF00939 Sodium:sulfate symporter transmembrane region BV122_835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BV122_835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BV122_838 PF07690 Major Facilitator Superfamily BV122_839 PF00596 Class II Aldolase and Adducin N-terminal domain BV122_84 PF01026 TatD related DNase BV122_840 PF05025 RbsD / FucU transport protein family BV122_841 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BV122_841 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BV122_842 PF07882 L-fucose isomerase, second N-terminal domain BV122_842 PF07881 L-fucose isomerase, first N-terminal domain BV122_842 PF02952 L-fucose isomerase, C-terminal domain BV122_843 PF08220 DeoR-like helix-turn-helix domain BV122_843 PF00455 DeoR C terminal sensor domain BV122_844 PF04851 Type III restriction enzyme, res subunit BV122_844 PF00271 Helicase conserved C-terminal domain BV122_844 PF18339 RapA N-terminal Tudor like domain 1 BV122_844 PF12137 RNA polymerase recycling family C-terminal BV122_844 PF18337 RapA N-terminal Tudor like domain BV122_845 PF00849 RNA pseudouridylate synthase BV122_846 PF01694 Rhomboid family BV122_847 PF00455 DeoR C terminal sensor domain BV122_847 PF08220 DeoR-like helix-turn-helix domain BV122_848 PF03180 NLPA lipoprotein BV122_849 PF00528 Binding-protein-dependent transport system inner membrane component BV122_85 PF00085 Thioredoxin BV122_850 PF00005 ABC transporter BV122_850 PF09383 NIL domain BV122_856 PF04220 Der GTPase activator (YihI) BV122_857 PF10675 Protein of unknown function (DUF2489) BV122_858 PF00196 Bacterial regulatory proteins, luxR family BV122_858 PF00072 Response regulator receiver domain BV122_859 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BV122_859 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BV122_861 PF01491 Frataxin-like domain BV122_862 PF00570 HRDC domain BV122_862 PF00271 Helicase conserved C-terminal domain BV122_862 PF00270 DEAD/DEAH box helicase BV122_862 PF16124 RecQ zinc-binding BV122_862 PF09382 RQC domain BV122_863 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BV122_863 PF03129 Anticodon binding domain BV122_863 PF04073 Aminoacyl-tRNA editing domain BV122_864 PF03968 OstA-like protein BV122_864 PF04453 LPS transport system D BV122_865 PF07732 Multicopper oxidase BV122_865 PF00394 Multicopper oxidase BV122_865 PF07731 Multicopper oxidase BV122_866 PF01553 Acyltransferase BV122_867 PF00149 Calcineurin-like phosphoesterase BV122_869 PF00209 Sodium:neurotransmitter symporter family BV122_87 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BV122_87 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BV122_870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BV122_871 PF00920 Dehydratase family BV122_872 PF00585 C-terminal regulatory domain of Threonine dehydratase BV122_872 PF00291 Pyridoxal-phosphate dependent enzyme BV122_873 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BV122_873 PF14579 Helix-hairpin-helix motif BV122_873 PF01336 OB-fold nucleic acid binding domain BV122_873 PF07733 Bacterial DNA polymerase III alpha NTPase domain BV122_873 PF02811 PHP domain BV122_874 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BV122_874 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BV122_874 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BV122_874 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BV122_875 PF02556 Preprotein translocase subunit SecB BV122_876 PF00581 Rhodanese-like domain BV122_877 PF03605 Anaerobic c4-dicarboxylate membrane transporter BV122_878 PF07992 Pyridine nucleotide-disulphide oxidoreductase BV122_879 PF01553 Acyltransferase BV122_88 PF01053 Cys/Met metabolism PLP-dependent enzyme BV122_880 PF01726 LexA DNA binding domain BV122_880 PF00717 Peptidase S24-like BV122_881 PF01678 Diaminopimelate epimerase BV122_882 PF08534 Redoxin BV122_883 PF07274 Protein of unknown function (DUF1440) BV122_884 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BV122_884 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BV122_884 PF02769 AIR synthase related protein, C-terminal domain BV122_885 PF03702 Anhydro-N-acetylmuramic acid kinase BV122_886 PF01380 SIS domain BV122_887 PF04748 Divergent polysaccharide deacetylase BV122_888 PF01551 Peptidase family M23 BV122_889 PF01551 Peptidase family M23 BV122_890 PF00300 Histidine phosphatase superfamily (branch 1) BV122_891 PF01197 Ribosomal protein L31 BV122_893 PF00730 HhH-GPD superfamily base excision DNA repair protein BV122_893 PF14815 NUDIX domain BV122_894 PF04362 Bacterial Fe(2+) trafficking BV122_895 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BV122_895 PF01464 Transglycosylase SLT domain BV122_898 PF00149 Calcineurin-like phosphoesterase BV122_899 PF13521 AAA domain BV122_899 PF01467 Cytidylyltransferase-like BV122_9 PF01292 Prokaryotic cytochrome b561 BV122_900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BV122_901 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BV122_902 PF00588 SpoU rRNA Methylase family BV122_904 PF00448 SRP54-type protein, GTPase domain BV122_904 PF02881 SRP54-type protein, helical bundle domain BV122_905 PF00005 ABC transporter BV122_906 PF18075 FtsX extracellular domain BV122_907 PF02803 Thiolase, C-terminal domain BV122_907 PF00108 Thiolase, N-terminal domain BV122_908 PF02667 Short chain fatty acid transporter BV122_909 PF01144 Coenzyme A transferase BV122_910 PF01144 Coenzyme A transferase BV122_911 PF03466 LysR substrate binding domain BV122_911 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BV122_912 PF00338 Ribosomal protein S10p/S20e BV122_913 PF00297 Ribosomal protein L3 BV122_914 PF00573 Ribosomal protein L4/L1 family BV122_915 PF00276 Ribosomal protein L23 BV122_916 PF00181 Ribosomal Proteins L2, RNA binding domain BV122_916 PF03947 Ribosomal Proteins L2, C-terminal domain BV122_917 PF00203 Ribosomal protein S19 BV122_918 PF00237 Ribosomal protein L22p/L17e BV122_919 PF07650 KH domain BV122_919 PF00189 Ribosomal protein S3, C-terminal domain BV122_920 PF00252 Ribosomal protein L16p/L10e BV122_921 PF00831 Ribosomal L29 protein BV122_922 PF00366 Ribosomal protein S17 BV122_924 PF00238 Ribosomal protein L14p/L23e BV122_925 PF00467 KOW motif BV122_925 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BV122_926 PF00673 ribosomal L5P family C-terminus BV122_926 PF00281 Ribosomal protein L5 BV122_927 PF00253 Ribosomal protein S14p/S29e BV122_928 PF00410 Ribosomal protein S8 BV122_929 PF00347 Ribosomal protein L6 BV122_93 PF14821 Threonine synthase N terminus BV122_93 PF00291 Pyridoxal-phosphate dependent enzyme BV122_930 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BV122_931 PF00333 Ribosomal protein S5, N-terminal domain BV122_931 PF03719 Ribosomal protein S5, C-terminal domain BV122_932 PF00327 Ribosomal protein L30p/L7e BV122_933 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BV122_934 PF00344 SecY translocase BV122_935 PF00444 Ribosomal protein L36 BV122_936 PF00416 Ribosomal protein S13/S18 BV122_937 PF00411 Ribosomal protein S11 BV122_938 PF01479 S4 domain BV122_938 PF00163 Ribosomal protein S4/S9 N-terminal domain BV122_939 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BV122_939 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BV122_939 PF01000 RNA polymerase Rpb3/RpoA insert domain BV122_94 PF00288 GHMP kinases N terminal domain BV122_94 PF08544 GHMP kinases C terminal BV122_940 PF01196 Ribosomal protein L17 BV122_941 PF00027 Cyclic nucleotide-binding domain BV122_942 PF04055 Radical SAM superfamily BV122_942 PF13186 Iron-sulfur cluster-binding domain BV122_943 PF04055 Radical SAM superfamily BV122_943 PF13186 Iron-sulfur cluster-binding domain BV122_944 PF01925 Sulfite exporter TauE/SafE BV122_945 PF13288 DXP reductoisomerase C-terminal domain BV122_945 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BV122_945 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BV122_946 PF01765 Ribosome recycling factor BV122_947 PF01293 Phosphoenolpyruvate carboxykinase BV122_948 PF01430 Hsp33 protein BV122_949 PF00206 Lyase BV122_949 PF14698 Argininosuccinate lyase C-terminal BV122_95 PF13840 ACT domain BV122_95 PF01842 ACT domain BV122_95 PF00696 Amino acid kinase family BV122_95 PF03447 Homoserine dehydrogenase, NAD binding domain BV122_95 PF00742 Homoserine dehydrogenase BV122_950 PF00483 Nucleotidyl transferase BV122_951 PF02599 Global regulator protein family BV122_952 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BV122_952 PF01411 tRNA synthetases class II (A) BV122_952 PF02272 DHHA1 domain BV122_953 PF00582 Universal stress protein family BV122_954 PF05195 Aminopeptidase P, N-terminal domain BV122_954 PF00557 Metallopeptidase family M24 BV122_955 PF03695 Uncharacterised protein family (UPF0149) BV122_956 PF01263 Aldose 1-epimerase BV122_957 PF00288 GHMP kinases N terminal domain BV122_957 PF10509 Galactokinase galactose-binding signature BV122_957 PF08544 GHMP kinases C terminal BV122_958 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BV122_958 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BV122_959 PF00356 Bacterial regulatory proteins, lacI family BV122_96 PF01168 Alanine racemase, N-terminal domain BV122_960 PF13407 Periplasmic binding protein domain BV122_961 PF00005 ABC transporter BV122_962 PF02653 Branched-chain amino acid transport system / permease component BV122_964 PF04279 Intracellular septation protein A BV122_965 PF03061 Thioesterase superfamily BV122_966 PF03795 YCII-related domain BV122_967 PF14718 Soluble lytic murein transglycosylase L domain BV122_967 PF01464 Transglycosylase SLT domain BV122_968 PF01371 Trp repressor protein BV122_969 PF00912 Transglycosylase BV122_97 PF02595 Glycerate kinase family BV122_970 PF02313 Fumarate reductase subunit D BV122_971 PF02300 Fumarate reductase subunit C BV122_972 PF13085 2Fe-2S iron-sulfur cluster binding domain BV122_972 PF13183 4Fe-4S dicluster domain BV122_973 PF02910 Fumarate reductase flavoprotein C-term BV122_973 PF00890 FAD binding domain BV122_974 PF00152 tRNA synthetases class II (D, K and N) BV122_975 PF00486 Transcriptional regulatory protein, C terminal BV122_975 PF00072 Response regulator receiver domain BV122_976 PF04355 SmpA / OmlA family BV122_977 PF04245 37-kD nucleoid-associated bacterial protein BV122_978 PF07208 Protein of unknown function (DUF1414) BV122_979 PF11893 Domain of unknown function (DUF3413) BV122_979 PF00884 Sulfatase BV122_98 PF02447 GntP family permease BV122_981 PF12804 MobA-like NTP transferase domain BV122_982 PF06288 Protein of unknown function (DUF1040) BV122_983 PF01323 DSBA-like thioredoxin domain BV122_984 PF04219 Protein of unknown function, DUF BV122_985 PF05958 tRNA (Uracil-5-)-methyltransferase BV122_986 PF04445 Putative SAM-dependent methyltransferase BV122_988 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BV122_989 PF07690 Major Facilitator Superfamily BV122_99 PF17853 GGDEF-like domain BV122_99 PF13556 PucR C-terminal helix-turn-helix domain BV122_99 PF05651 Putative sugar diacid recognition BV122_990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BV122_991 PF01243 Pyridoxamine 5'-phosphate oxidase BV122_991 PF10615 Protein of unknown function (DUF2470) BV122_993 PF01612 3'-5' exonuclease BV122_993 PF01367 5'-3' exonuclease, C-terminal SAM fold BV122_993 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BV122_993 PF00476 DNA polymerase family A BV122_994 PF05164 Cell division protein ZapA BV122_995 PF01812 5-formyltetrahydrofolate cyclo-ligase family BV122_996 PF02861 Clp amino terminal domain, pathogenicity island component BV122_996 PF10431 C-terminal, D2-small domain, of ClpB protein BV122_996 PF17871 AAA lid domain BV122_996 PF07724 AAA domain (Cdc48 subfamily) BV122_996 PF00004 ATPase family associated with various cellular activities (AAA) BV122_997 PF00588 SpoU rRNA Methylase family BV122_997 PF08032 RNA 2'-O ribose methyltransferase substrate binding BV122_998 PF00773 RNB domain BV122_998 PF08461 Ribonuclease R winged-helix domain BV122_998 PF00575 S1 RNA binding domain BV122_998 PF08206 Ribonuclease B OB domain BV122_998 PF17876 Cold shock domain