CH621_00005 PF00308 Bacterial dnaA protein CH621_00005 PF08299 Bacterial dnaA protein helix-turn-helix CH621_00005 PF11638 DnaA N-terminal domain CH621_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CH621_00010 PF02767 DNA polymerase III beta subunit, central domain CH621_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CH621_00015 PF02463 RecF/RecN/SMC N terminal domain CH621_00025 PF00694 Aconitase C-terminal domain CH621_00030 PF00330 Aconitase family (aconitate hydratase) CH621_00035 PF00180 Isocitrate/isopropylmalate dehydrogenase CH621_00040 PF00682 HMGL-like CH621_00040 PF08502 LeuA allosteric (dimerisation) domain CH621_00045 PF02481 DNA recombination-mediator protein A CH621_00050 PF03883 CH621_00050 CH621_00060 PF00365 Phosphofructokinase CH621_00065 PF01668 SmpB protein CH621_00070 PF02954 Bacterial regulatory protein, Fis family CH621_00075 PF01207 Dihydrouridine synthase (Dus) CH621_00080 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CH621_00085 PF02661 Fic/DOC family CH621_00090 PF00892 EamA-like transporter family CH621_00095 PF00474 Sodium:solute symporter family CH621_00100 PF06196 CH621_00100 CH621_00105 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CH621_00105 PF02785 Biotin carboxylase C-terminal domain CH621_00105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH621_00110 PF00364 Biotin-requiring enzyme CH621_00115 PF01220 Dehydroquinase class II CH621_00120 PF13378 Enolase C-terminal domain-like CH621_00125 PF00378 Enoyl-CoA hydratase/isomerase family CH621_00140 PF01649 Ribosomal protein S20 CH621_00150 PF03023 CH621_00150 CH621_00155 PF01687 Riboflavin kinase CH621_00155 PF06574 FAD synthetase CH621_00160 PF00133 tRNA synthetases class I (I, L, M and V) CH621_00160 PF06827 Zinc finger found in FPG and IleRS CH621_00160 PF08264 Anticodon-binding domain of tRNA CH621_00165 PF01230 HIT domain CH621_00170 PF07233 Protein of unknown function (DUF1425) CH621_00175 PF00933 Glycosyl hydrolase family 3 N terminal domain CH621_00180 PF05958 tRNA (Uracil-5-)-methyltransferase CH621_00185 PF00027 Cyclic nucleotide-binding domain CH621_00185 PF00325 Bacterial regulatory proteins, crp family CH621_00190 PF06794 Uncharacterised protein family (UPF0270) CH621_00195 PF00440 Bacterial regulatory proteins, tetR family CH621_00200 PF00692 dUTPase CH621_00205 PF02441 Flavoprotein CH621_00205 PF04127 DNA / pantothenate metabolism flavoprotein CH621_00210 PF04002 RadC-like JAB domain CH621_00215 PF00830 Ribosomal L28 family CH621_00220 PF00471 Ribosomal protein L33 CH621_00225 PF00202 Aminotransferase class-III CH621_00230 PF04014 Antidote-toxin recognition MazE CH621_00235 PF01850 PIN domain CH621_00240 PF00282 Pyridoxal-dependent decarboxylase conserved domain CH621_00245 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CH621_00245 PF06827 Zinc finger found in FPG and IleRS CH621_00245 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CH621_00250 PF13180 PDZ domain CH621_00250 PF13365 Trypsin-like peptidase domain CH621_00255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH621_00255 PF01872 RibD C-terminal domain CH621_00260 PF03477 ATP cone domain CH621_00265 PF04257 Exodeoxyribonuclease V, gamma subunit CH621_00270 PF17344 CH621_00270 CH621_00275 PF10833 CH621_00275 CH621_00285 PF07963 Prokaryotic N-terminal methylation motif CH621_00290 PF00459 Inositol monophosphatase family CH621_00295 PF01578 CH621_00295 CH621_00295 PF16327 CH621_00295 CH621_00300 PF08534 Redoxin CH621_00305 PF03918 Cytochrome C biogenesis protein CH621_00310 PF03486 HI0933-like protein CH621_00315 PF00113 Enolase, C-terminal TIM barrel domain CH621_00315 PF03952 Enolase, N-terminal domain CH621_00320 PF10008 CH621_00320 CH621_00330 PF03738 Glutathionylspermidine synthase preATP-grasp CH621_00335 PF00199 Catalase CH621_00335 PF06628 Catalase-related immune-responsive CH621_00340 PF02091 Glycyl-tRNA synthetase alpha subunit CH621_00350 PF04480 Protein of unknown function (DUF559) CH621_00360 PF02092 CH621_00360 CH621_00360 PF05746 DALR anticodon binding domain CH621_00370 PF06144 DNA polymerase III, delta subunit CH621_00370 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CH621_00375 PF04390 Lipopolysaccharide-assembly CH621_00380 PF00133 tRNA synthetases class I (I, L, M and V) CH621_00380 PF08264 Anticodon-binding domain of tRNA CH621_00380 PF13603 Leucyl-tRNA synthetase, Domain 2 CH621_00385 PF01255 Putative undecaprenyl diphosphate synthase CH621_00390 PF01148 Cytidylyltransferase family CH621_00395 PF02163 Peptidase family M50 CH621_00400 PF01103 Surface antigen CH621_00400 PF07244 Surface antigen variable number repeat CH621_00405 PF03938 Outer membrane protein (OmpH-like) CH621_00410 PF00132 Bacterial transferase hexapeptide (six repeats) CH621_00410 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CH621_00415 PF00889 Elongation factor TS CH621_00420 PF00318 Ribosomal protein S2 CH621_00425 PF08241 Methyltransferase domain CH621_00430 PF00999 Sodium/hydrogen exchanger family CH621_00430 PF02254 TrkA-N domain CH621_00435 PF00293 NUDIX domain CH621_00440 PF01043 SecA preprotein cross-linking domain CH621_00440 PF02810 SEC-C motif CH621_00440 PF07516 SecA Wing and Scaffold domain CH621_00440 PF07517 SecA DEAD-like domain CH621_00445 PF10818 CH621_00445 CH621_00450 PF05258 CH621_00450 CH621_00455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH621_00460 PF00303 Thymidylate synthase CH621_00465 PF01790 CH621_00465 CH621_00470 PF01925 CH621_00470 CH621_00475 PF00293 NUDIX domain CH621_00480 PF00696 Amino acid kinase family CH621_00480 PF01472 PUA domain CH621_00485 PF00186 Dihydrofolate reductase CH621_00490 PF00529 HlyD family secretion protein CH621_00490 PF16576 CH621_00490 CH621_00495 PF07690 Major Facilitator Superfamily CH621_00500 PF05036 Sporulation related domain CH621_00505 PF00873 AcrB/AcrD/AcrF family CH621_00510 PF16576 CH621_00510 CH621_00515 PF00440 Bacterial regulatory proteins, tetR family CH621_00520 PF00270 DEAD/DEAH box helicase CH621_00520 PF00271 Helicase conserved C-terminal domain CH621_00525 PF03884 Domain of unknown function (DUF329) CH621_00530 PF01121 Dephospho-CoA kinase CH621_00535 PF00464 Serine hydroxymethyltransferase CH621_00540 PF00884 Sulfatase CH621_00545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CH621_00545 PF02843 Phosphoribosylglycinamide synthetase, C domain CH621_00545 PF02844 Phosphoribosylglycinamide synthetase, N domain CH621_00550 PF01808 AICARFT/IMPCHase bienzyme CH621_00550 PF02142 MGS-like domain CH621_00555 PF07681 CH621_00555 CH621_00560 PF00085 Thioredoxin CH621_00560 PF02683 CH621_00560 CH621_00560 PF11412 Disulphide bond corrector protein DsbC CH621_00565 PF00072 Response regulator receiver domain CH621_00565 PF00486 Transcriptional regulatory protein, C terminal CH621_00570 PF01235 CH621_00570 CH621_00575 PF02677 CH621_00575 CH621_00580 PF00348 Polyprenyl synthetase CH621_00585 PF00829 Ribosomal prokaryotic L21 protein CH621_00590 PF01016 Ribosomal L27 protein CH621_00595 PF00892 EamA-like transporter family CH621_00600 PF01018 GTP1/OBG CH621_00600 PF01926 50S ribosome-binding GTPase CH621_00605 PF00334 Nucleoside diphosphate kinase CH621_00610 PF00883 Cytosol aminopeptidase family, catalytic domain CH621_00610 PF12404 CH621_00610 CH621_00615 PF16363 CH621_00615 CH621_00620 PF00120 Glutamine synthetase, catalytic domain CH621_00620 PF03951 Glutamine synthetase, beta-Grasp domain CH621_00625 PF06002 Alpha-2,3-sialyltransferase (CST-I) CH621_00630 PF00009 Elongation factor Tu GTP binding domain CH621_00630 PF00679 Elongation factor G C-terminus CH621_00630 PF03144 Elongation factor Tu domain 2 CH621_00635 PF01243 Pyridoxamine 5'-phosphate oxidase CH621_00635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CH621_00640 PF02592 CH621_00640 CH621_00655 PF01755 CH621_00655 CH621_00660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH621_00665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CH621_00665 PF06827 Zinc finger found in FPG and IleRS CH621_00665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CH621_00670 PF13531 Bacterial extracellular solute-binding protein CH621_00675 PF00005 ABC transporter CH621_00690 PF03895 YadA-like C-terminal region CH621_00695 PF00575 S1 RNA binding domain CH621_00695 PF00773 RNB domain CH621_00695 PF08206 Ribonuclease B OB domain CH621_00695 PF08461 Ribonuclease R winged-helix domain CH621_00700 PF00588 SpoU rRNA Methylase family CH621_00700 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH621_00705 PF00004 ATPase family associated with various cellular activities (AAA) CH621_00705 PF02861 Clp amino terminal domain CH621_00705 PF07724 AAA domain (Cdc48 subfamily) CH621_00705 PF10431 C-terminal, D2-small domain, of ClpB protein CH621_00710 PF01812 5-formyltetrahydrofolate cyclo-ligase family CH621_00720 PF05164 Cell division protein ZapA CH621_00725 PF00476 DNA polymerase family A CH621_00725 PF01367 5'-3' exonuclease, C-terminal SAM fold CH621_00725 PF01612 3'-5' exonuclease CH621_00725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH621_00735 PF01243 Pyridoxamine 5'-phosphate oxidase CH621_00735 PF10615 Protein of unknown function (DUF2470) CH621_00740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH621_00745 PF07690 Major Facilitator Superfamily CH621_00750 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CH621_00760 PF04246 CH621_00760 CH621_00765 PF04445 Putative SAM-dependent methyltransferase CH621_00770 PF05958 tRNA (Uracil-5-)-methyltransferase CH621_00775 PF04219 CH621_00775 CH621_00780 PF01323 DSBA-like thioredoxin domain CH621_00785 PF06288 Protein of unknown function (DUF1040) CH621_00790 PF12804 MobA-like NTP transferase domain CH621_00795 PF01979 Amidohydrolase family CH621_00800 PF00884 Sulfatase CH621_00800 PF11893 CH621_00800 CH621_00805 PF07208 Protein of unknown function (DUF1414) CH621_00810 PF04245 CH621_00810 CH621_00815 PF04355 SmpA / OmlA family CH621_00820 PF00072 Response regulator receiver domain CH621_00820 PF00486 Transcriptional regulatory protein, C terminal CH621_00825 PF00152 tRNA synthetases class II (D, K and N) CH621_00830 PF00890 FAD binding domain CH621_00830 PF02910 Fumarate reductase flavoprotein C-term CH621_00835 PF13085 2Fe-2S iron-sulfur cluster binding domain CH621_00835 PF13183 4Fe-4S dicluster domain CH621_00840 PF02300 Fumarate reductase subunit C CH621_00845 PF02313 Fumarate reductase subunit D CH621_00850 PF00912 Transglycosylase CH621_00855 PF01371 Trp repressor protein CH621_00860 PF01464 Transglycosylase SLT domain CH621_00860 PF14718 Soluble lytic murein transglycosylase L domain CH621_00865 PF03795 YCII-related domain CH621_00870 PF03061 Thioesterase superfamily CH621_00875 PF04279 CH621_00875 CH621_00885 PF02653 CH621_00885 CH621_00890 PF00005 ABC transporter CH621_00895 PF13407 Periplasmic binding protein domain CH621_00900 PF00356 Bacterial regulatory proteins, lacI family CH621_00900 PF13377 Periplasmic binding protein-like domain CH621_00905 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CH621_00905 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CH621_00910 PF00288 GHMP kinases N terminal domain CH621_00910 PF08544 GHMP kinases C terminal CH621_00910 PF10509 Galactokinase galactose-binding signature CH621_00915 PF01263 Aldose 1-epimerase CH621_00920 PF03695 Uncharacterised protein family (UPF0149) CH621_00925 PF00557 Metallopeptidase family M24 CH621_00925 PF05195 Aminopeptidase P, N-terminal domain CH621_00930 PF00582 Universal stress protein family CH621_00935 PF01411 tRNA synthetases class II (A) CH621_00935 PF02272 DHHA1 domain CH621_00935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH621_00940 PF02599 Global regulator protein family CH621_00945 PF00483 Nucleotidyl transferase CH621_00950 PF00206 Lyase CH621_00950 PF14698 Argininosuccinate lyase C-terminal CH621_00955 PF01430 Hsp33 protein CH621_00960 PF01293 Phosphoenolpyruvate carboxykinase CH621_00965 PF01765 Ribosome recycling factor CH621_00970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CH621_00970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CH621_00970 PF13288 DXP reductoisomerase C-terminal domain CH621_00975 PF01925 CH621_00975 CH621_00985 PF00027 Cyclic nucleotide-binding domain CH621_00990 PF01196 Ribosomal protein L17 CH621_00995 PF01000 RNA polymerase Rpb3/RpoA insert domain CH621_00995 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CH621_00995 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CH621_01000 PF00163 Ribosomal protein S4/S9 N-terminal domain CH621_01000 PF01479 S4 domain CH621_01005 PF00411 Ribosomal protein S11 CH621_01010 PF00416 Ribosomal protein S13/S18 CH621_01015 PF00444 Ribosomal protein L36 CH621_01020 PF00344 SecY translocase CH621_01025 PF00828 Ribosomal protein L18e/L15 CH621_01030 PF00327 Ribosomal protein L30p/L7e CH621_01035 PF00333 Ribosomal protein S5, N-terminal domain CH621_01035 PF03719 Ribosomal protein S5, C-terminal domain CH621_01040 PF00861 Ribosomal L18p/L5e family CH621_01045 PF00347 Ribosomal protein L6 CH621_01050 PF00410 Ribosomal protein S8 CH621_01055 PF00253 Ribosomal protein S14p/S29e CH621_01060 PF00281 Ribosomal protein L5 CH621_01060 PF00673 ribosomal L5P family C-terminus CH621_01065 PF00467 KOW motif CH621_01065 PF17136 CH621_01065 CH621_01070 PF00238 Ribosomal protein L14p/L23e CH621_01080 PF00366 Ribosomal protein S17 CH621_01085 PF00831 Ribosomal L29 protein CH621_01090 PF00252 Ribosomal protein L16p/L10e CH621_01095 PF00189 Ribosomal protein S3, C-terminal domain CH621_01095 PF07650 KH domain CH621_01100 PF00237 Ribosomal protein L22p/L17e CH621_01105 PF00203 Ribosomal protein S19 CH621_01110 PF00181 Ribosomal Proteins L2, RNA binding domain CH621_01110 PF03947 Ribosomal Proteins L2, C-terminal domain CH621_01115 PF00276 Ribosomal protein L23 CH621_01120 PF00573 Ribosomal protein L4/L1 family CH621_01125 PF00297 Ribosomal protein L3 CH621_01130 PF00338 Ribosomal protein S10p/S20e CH621_01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_01135 PF03466 LysR substrate binding domain CH621_01140 PF01144 Coenzyme A transferase CH621_01145 PF01144 Coenzyme A transferase CH621_01150 PF02667 CH621_01150 CH621_01155 PF00108 Thiolase, N-terminal domain CH621_01155 PF02803 Thiolase, C-terminal domain CH621_01160 PF02687 CH621_01160 CH621_01165 PF00005 ABC transporter CH621_01170 PF00448 SRP54-type protein, GTPase domain CH621_01170 PF02881 SRP54-type protein, helical bundle domain CH621_01175 PF03602 Conserved hypothetical protein 95 CH621_01180 PF00588 SpoU rRNA Methylase family CH621_01190 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CH621_01195 PF01467 Cytidylyltransferase CH621_01195 PF13521 AAA domain CH621_01200 PF00149 Calcineurin-like phosphoesterase CH621_01215 PF01464 Transglycosylase SLT domain CH621_01215 PF11873 Domain of unknown function (DUF3393) CH621_01220 PF04362 Bacterial Fe(2+) trafficking CH621_01225 PF00730 HhH-GPD superfamily base excision DNA repair protein CH621_01225 PF14815 NUDIX domain CH621_01230 PF01197 Ribosomal protein L31 CH621_01235 PF00300 Histidine phosphatase superfamily (branch 1) CH621_01240 PF01551 Peptidase family M23 CH621_01245 PF04748 Divergent polysaccharide deacetylase CH621_01250 PF01755 CH621_01250 CH621_01260 PF02769 AIR synthase related protein, C-terminal domain CH621_01260 PF13507 CobB/CobQ-like glutamine amidotransferase domain CH621_01270 PF08534 Redoxin CH621_01275 PF01678 Diaminopimelate epimerase CH621_01280 PF00717 Peptidase S24-like CH621_01280 PF01726 LexA DNA binding domain CH621_01285 PF01553 Acyltransferase CH621_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH621_01295 PF03605 CH621_01295 CH621_01300 PF00581 Rhodanese-like domain CH621_01305 PF02556 Preprotein translocase subunit SecB CH621_01310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH621_01310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH621_01310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH621_01310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH621_01315 PF01336 OB-fold nucleic acid binding domain CH621_01315 PF02811 PHP domain CH621_01315 PF07733 Bacterial DNA polymerase III alpha subunit CH621_01315 PF14579 Helix-hairpin-helix motif CH621_01320 PF00291 Pyridoxal-phosphate dependent enzyme CH621_01320 PF00585 C-terminal regulatory domain of Threonine dehydratase CH621_01325 PF00920 Dehydratase family CH621_01330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH621_01330 PF13710 ACT domain CH621_01340 PF00209 Sodium:neurotransmitter symporter family CH621_01345 PF16951 CH621_01345 CH621_01350 PF00149 Calcineurin-like phosphoesterase CH621_01355 PF01553 Acyltransferase CH621_01360 PF00394 Multicopper oxidase CH621_01360 PF07731 Multicopper oxidase CH621_01360 PF07732 Multicopper oxidase CH621_01365 PF03968 OstA-like protein CH621_01365 PF04453 Organic solvent tolerance protein CH621_01370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH621_01370 PF03129 Anticodon binding domain CH621_01370 PF04073 Aminoacyl-tRNA editing domain CH621_01375 PF00270 DEAD/DEAH box helicase CH621_01375 PF00271 Helicase conserved C-terminal domain CH621_01375 PF00570 HRDC domain CH621_01375 PF09382 RQC domain CH621_01375 PF16124 CH621_01375 CH621_01380 PF01491 Frataxin-like domain CH621_01385 PF13627 CH621_01385 CH621_01390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CH621_01390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH621_01395 PF00072 Response regulator receiver domain CH621_01395 PF00196 Bacterial regulatory proteins, luxR family CH621_01400 PF10675 CH621_01400 CH621_01405 PF04220 CH621_01405 CH621_01435 PF13242 HAD-hyrolase-like CH621_01440 PF00005 ABC transporter CH621_01440 PF09383 NIL domain CH621_01445 PF00528 Binding-protein-dependent transport system inner membrane component CH621_01450 PF03180 NLPA lipoprotein CH621_01455 PF00455 CH621_01455 CH621_01455 PF08220 DeoR-like helix-turn-helix domain CH621_01460 PF01694 Rhomboid family CH621_01465 PF00849 RNA pseudouridylate synthase CH621_01470 PF00271 Helicase conserved C-terminal domain CH621_01470 PF04851 Type III restriction enzyme, res subunit CH621_01470 PF12137 RNA polymerase recycling family C-terminal CH621_01475 PF00455 CH621_01475 CH621_01475 PF08220 DeoR-like helix-turn-helix domain CH621_01480 PF02952 L-fucose isomerase, C-terminal domain CH621_01480 PF07881 L-fucose isomerase, first N-terminal domain CH621_01480 PF07882 L-fucose isomerase, second N-terminal domain CH621_01485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH621_01485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH621_01490 PF05025 RbsD / FucU transport protein family CH621_01495 PF00596 Class II Aldolase and Adducin N-terminal domain CH621_01515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CH621_01515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CH621_01520 PF00939 Sodium:sulfate symporter transmembrane region CH621_01525 PF08501 Shikimate dehydrogenase substrate binding domain CH621_01530 PF00132 Bacterial transferase hexapeptide (six repeats) CH621_01530 PF06426 Serine acetyltransferase, N-terminal CH621_01535 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CH621_01535 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CH621_01540 PF01295 CH621_01540 CH621_01540 PF12633 CH621_01540 CH621_01545 PF04375 CH621_01545 CH621_01550 PF07219 CH621_01550 CH621_01555 PF06146 CH621_01555 CH621_01600 PF02386 Cation transport protein CH621_01605 PF01205 Uncharacterized protein family UPF0029 CH621_01605 PF09186 Domain of unknown function (DUF1949) CH621_01610 PF01206 Sulfurtransferase TusA CH621_01615 PF01435 Peptidase family M48 CH621_01620 PF01042 Endoribonuclease L-PSP CH621_01625 PF04333 CH621_01625 CH621_01630 PF00467 KOW motif CH621_01630 PF02357 Transcription termination factor nusG CH621_01635 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CH621_01640 PF06689 ClpX C4-type zinc finger CH621_01640 PF07724 AAA domain (Cdc48 subfamily) CH621_01640 PF10431 C-terminal, D2-small domain, of ClpB protein CH621_01645 PF00574 Clp protease CH621_01650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH621_01650 PF05697 Bacterial trigger factor protein (TF) CH621_01650 PF05698 Bacterial trigger factor protein (TF) C-terminus CH621_01655 PF00593 TonB dependent receptor CH621_01655 PF04886 CH621_01655 CH621_01655 PF07715 TonB-dependent Receptor Plug Domain CH621_01660 PF11738 Protein of unknown function (DUF3298) CH621_01670 PF03841 L-seryl-tRNA selenium transferase CH621_01670 PF12390 CH621_01670 CH621_01680 PF00488 MutS domain V CH621_01680 PF01624 MutS domain I CH621_01680 PF05188 MutS domain II CH621_01680 PF05190 MutS family domain IV CH621_01680 PF05192 MutS domain III CH621_01685 PF03222 Tryptophan/tyrosine permease family CH621_01700 PF01476 LysM domain CH621_01700 PF01551 Peptidase family M23 CH621_01710 PF09335 CH621_01710 CH621_01715 PF01975 Survival protein SurE CH621_01720 PF01142 tRNA pseudouridine synthase D (TruD) CH621_01725 PF06877 Regulator of ribonuclease activity B CH621_01730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH621_01735 PF01103 Surface antigen CH621_01735 PF07244 Surface antigen variable number repeat CH621_01735 PF17243 CH621_01735 CH621_01740 PF04357 CH621_01740 CH621_01745 PF02541 Ppx/GppA phosphatase family CH621_01750 PF00849 RNA pseudouridylate synthase CH621_01755 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CH621_01765 PF00156 Phosphoribosyl transferase domain CH621_01770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH621_01770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH621_01780 PF03009 Glycerophosphoryl diester phosphodiesterase family CH621_01785 PF07690 Major Facilitator Superfamily CH621_01790 PF01266 FAD dependent oxidoreductase CH621_01790 PF04324 BFD-like [2Fe-2S] binding domain CH621_01795 PF00890 FAD binding domain CH621_01800 PF02754 CH621_01800 CH621_01800 PF13183 4Fe-4S dicluster domain CH621_01805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CH621_01805 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CH621_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_01810 PF03466 LysR substrate binding domain CH621_01815 PF00892 EamA-like transporter family CH621_01820 PF00581 Rhodanese-like domain CH621_01825 PF00121 Triosephosphate isomerase CH621_01835 PF00589 Phage integrase family CH621_01835 PF02899 Phage integrase, N-terminal SAM-like domain CH621_01840 PF01546 Peptidase family M20/M25/M40 CH621_01840 PF07687 Peptidase dimerisation domain CH621_01845 PF00156 Phosphoribosyl transferase domain CH621_01850 PF04977 Septum formation initiator CH621_01855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CH621_01860 PF02542 YgbB family CH621_01865 PF02580 D-Tyr-tRNA(Tyr) deacylase CH621_01870 PF00258 Flavodoxin CH621_01875 PF06005 Protein of unknown function (DUF904) CH621_01880 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CH621_01885 PF00005 ABC transporter CH621_01885 PF00664 ABC transporter transmembrane region CH621_01890 PF00005 ABC transporter CH621_01890 PF00664 ABC transporter transmembrane region CH621_01900 PF00593 TonB dependent receptor CH621_01900 PF04886 CH621_01900 CH621_01900 PF07715 TonB-dependent Receptor Plug Domain CH621_01905 PF00005 ABC transporter CH621_01905 PF12848 ABC transporter CH621_01910 PF01396 CH621_01910 CH621_01915 PF01300 Telomere recombination CH621_01920 PF01488 Shikimate / quinate 5-dehydrogenase CH621_01920 PF08501 Shikimate dehydrogenase substrate binding domain CH621_01925 PF12686 CH621_01925 CH621_01930 PF03352 Methyladenine glycosylase CH621_01935 PF00535 Glycosyl transferase family 2 CH621_01940 PF00534 Glycosyl transferases group 1 CH621_01940 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CH621_01945 PF01467 Cytidylyltransferase CH621_01950 PF07119 CH621_01950 CH621_01955 PF00580 UvrD/REP helicase N-terminal domain CH621_01955 PF13361 UvrD-like helicase C-terminal domain CH621_01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_01960 PF03466 LysR substrate binding domain CH621_01965 PF02525 Flavodoxin-like fold CH621_01970 PF02308 CH621_01970 CH621_01975 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH621_01975 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH621_01980 PF12146 Putative lysophospholipase CH621_01985 PF03264 NapC/NirT cytochrome c family, N-terminal region CH621_01990 PF00384 Molybdopterin oxidoreductase CH621_01990 PF01568 Molydopterin dinucleotide binding domain CH621_02010 PF17364 CH621_02010 CH621_02015 PF00132 Bacterial transferase hexapeptide (six repeats) CH621_02015 PF12804 MobA-like NTP transferase domain CH621_02020 PF00542 Ribosomal protein L7/L12 C-terminal domain CH621_02020 PF16320 CH621_02020 CH621_02025 PF00466 Ribosomal protein L10 CH621_02030 PF00206 Lyase CH621_02030 PF08328 Adenylosuccinate lyase C-terminal CH621_02035 PF04356 Protein of unknown function (DUF489) CH621_02040 PF00579 tRNA synthetases class I (W and Y) CH621_02045 PF04175 Protein of unknown function (DUF406) CH621_02050 PF00593 TonB dependent receptor CH621_02050 PF07715 TonB-dependent Receptor Plug Domain CH621_02060 PF01207 Dihydrouridine synthase (Dus) CH621_02065 PF00654 Voltage gated chloride channel CH621_02070 PF00009 Elongation factor Tu GTP binding domain CH621_02070 PF03143 Elongation factor Tu C-terminal domain CH621_02070 PF03144 Elongation factor Tu domain 2 CH621_02095 PF00485 Phosphoribulokinase / Uridine kinase family CH621_02100 PF03888 MucB/RseB family CH621_02100 PF17188 CH621_02100 CH621_02105 PF03872 Anti sigma-E protein RseA, N-terminal domain CH621_02105 PF03873 Anti sigma-E protein RseA, C-terminal domain CH621_02110 PF04542 Sigma-70 region 2 CH621_02110 PF08281 Sigma-70, region 4 CH621_02115 PF03937 Flavinator of succinate dehydrogenase CH621_02120 PF01741 Large-conductance mechanosensitive channel, MscL CH621_02125 PF02080 TrkA-C domain CH621_02125 PF02254 TrkA-N domain CH621_02130 PF01029 NusB family CH621_02130 PF01189 NOL1/NOP2/sun family CH621_02135 PF00551 Formyl transferase CH621_02135 PF02911 Formyl transferase, C-terminal domain CH621_02140 PF01327 Polypeptide deformylase CH621_02145 PF10722 Putative bacterial sensory transduction regulator CH621_02175 PF04993 TfoX N-terminal domain CH621_02175 PF04994 TfoX C-terminal domain CH621_02180 PF00154 recA bacterial DNA recombination protein CH621_02185 PF02631 RecX family CH621_02190 PF02537 CH621_02190 CH621_02195 PF08282 haloacid dehalogenase-like hydrolase CH621_02200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH621_02200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH621_02205 PF00696 Amino acid kinase family CH621_02210 PF03606 CH621_02210 CH621_02230 PF00593 TonB dependent receptor CH621_02230 PF07715 TonB-dependent Receptor Plug Domain CH621_02235 PF07751 CH621_02235 CH621_02245 PF03606 CH621_02245 CH621_02250 PF01546 Peptidase family M20/M25/M40 CH621_02250 PF07687 Peptidase dimerisation domain CH621_02255 PF00149 Calcineurin-like phosphoesterase CH621_02255 PF02872 5'-nucleotidase, C-terminal domain CH621_02260 PF13411 MerR HTH family regulatory protein CH621_02265 PF01545 Cation efflux family CH621_02270 PF01134 Glucose inhibited division protein A CH621_02270 PF13932 GidA associated domain 3 CH621_02275 PF00164 Ribosomal protein S12/S23 CH621_02280 PF00177 Ribosomal protein S7p/S5e CH621_02285 PF00009 Elongation factor Tu GTP binding domain CH621_02285 PF00679 Elongation factor G C-terminus CH621_02285 PF03144 Elongation factor Tu domain 2 CH621_02285 PF03764 Elongation factor G, domain IV CH621_02285 PF14492 Elongation Factor G, domain II CH621_02290 PF00009 Elongation factor Tu GTP binding domain CH621_02290 PF03143 Elongation factor Tu C-terminal domain CH621_02290 PF03144 Elongation factor Tu domain 2 CH621_02295 PF04077 DsrH like protein CH621_02300 PF02635 DsrE/DsrF-like family CH621_02305 PF02635 DsrE/DsrF-like family CH621_02310 PF08348 CH621_02310 CH621_02310 PF13309 CH621_02310 CH621_02315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH621_02315 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH621_02320 PF04102 SlyX CH621_02325 PF00462 Glutaredoxin CH621_02325 PF08534 Redoxin CH621_02330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_02330 PF03466 LysR substrate binding domain CH621_02335 PF00440 Bacterial regulatory proteins, tetR family CH621_02340 PF01272 Transcription elongation factor, GreA/GreB, C-term CH621_02340 PF03449 Transcription elongation factor, N-terminal CH621_02345 PF00575 S1 RNA binding domain CH621_02345 PF09371 Tex-like protein N-terminal domain CH621_02345 PF12836 Helix-hairpin-helix motif CH621_02345 PF16921 CH621_02345 CH621_02350 PF00204 DNA gyrase B CH621_02350 PF00986 DNA gyrase B subunit, carboxyl terminus CH621_02350 PF01751 Toprim domain CH621_02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH621_02355 PF00834 Ribulose-phosphate 3 epimerase family CH621_02360 PF13419 Haloacid dehalogenase-like hydrolase CH621_02365 PF03590 Aspartate-ammonia ligase CH621_02370 PF01037 AsnC family CH621_02370 PF13404 AsnC-type helix-turn-helix domain CH621_02375 PF01479 S4 domain CH621_02380 PF03169 CH621_02380 CH621_02390 PF00459 Inositol monophosphatase family CH621_02395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CH621_02395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CH621_02400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CH621_02410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CH621_02410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH621_02415 PF10786 CH621_02415 CH621_02420 PF00149 Calcineurin-like phosphoesterase CH621_02430 PF00398 Ribosomal RNA adenine dimethylase CH621_02450 PF01176 Translation initiation factor 1A / IF-1 CH621_02455 PF01250 Ribosomal protein S6 CH621_02460 PF00436 Single-strand binding protein family CH621_02465 PF01084 Ribosomal protein S18 CH621_02470 PF01281 Ribosomal protein L9, N-terminal domain CH621_02470 PF03948 Ribosomal protein L9, C-terminal domain CH621_02475 PF00118 TCP-1/cpn60 chaperonin family CH621_02480 PF00166 Chaperonin 10 Kd subunit CH621_02485 PF00547 Urease, gamma subunit CH621_02490 PF00699 Urease beta subunit CH621_02495 PF00449 Urease alpha-subunit, N-terminal domain CH621_02495 PF01979 Amidohydrolase family CH621_02500 PF02814 UreE urease accessory protein, N-terminal domain CH621_02500 PF05194 UreE urease accessory protein, C-terminal domain CH621_02505 PF01730 UreF CH621_02510 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH621_02515 PF01774 UreD urease accessory protein CH621_02520 PF00206 Lyase CH621_02520 PF10415 Fumarase C C-terminus CH621_02525 PF00140 Sigma-70 factor, region 1 CH621_02525 PF03979 Sigma-70 factor, region 1 CH621_02525 PF04539 Sigma-70 region 3 CH621_02525 PF04542 Sigma-70 region 2 CH621_02525 PF04545 Sigma-70, region 4 CH621_02525 PF04546 Sigma-70, non-essential region CH621_02530 PF01807 CHC2 zinc finger CH621_02530 PF08275 DNA primase catalytic core, N-terminal domain CH621_02530 PF08278 DNA primase DnaG DnaB-binding CH621_02530 PF10410 DnaB-helicase binding domain of primase CH621_02530 PF13155 Toprim-like CH621_02535 PF01165 Ribosomal protein S21 CH621_02540 PF00814 Glycoprotease family CH621_02545 PF00265 Thymidine kinase CH621_02550 PF03222 Tryptophan/tyrosine permease family CH621_02555 PF00037 4Fe-4S binding domain CH621_02560 PF00445 Ribonuclease T2 family CH621_02565 PF00162 Phosphoglycerate kinase CH621_02570 PF01116 Fructose-bisphosphate aldolase class-II CH621_02575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH621_02585 PF11230 CH621_02585 CH621_02590 PF04055 Radical SAM superfamily CH621_02590 PF13353 4Fe-4S single cluster domain CH621_02595 PF01773 Na+ dependent nucleoside transporter N-terminus CH621_02595 PF07662 Na+ dependent nucleoside transporter C-terminus CH621_02595 PF07670 Nucleoside recognition CH621_02600 PF01048 Phosphorylase superfamily CH621_02605 PF00298 Ribosomal protein L11, RNA binding domain CH621_02605 PF03946 Ribosomal protein L11, N-terminal domain CH621_02610 PF00687 Ribosomal protein L1p/L10e family CH621_02620 PF00562 RNA polymerase Rpb2, domain 6 CH621_02620 PF04560 RNA polymerase Rpb2, domain 7 CH621_02620 PF04561 RNA polymerase Rpb2, domain 2 CH621_02620 PF04563 RNA polymerase beta subunit CH621_02620 PF04565 RNA polymerase Rpb2, domain 3 CH621_02620 PF10385 RNA polymerase beta subunit external 1 domain CH621_02630 PF00623 RNA polymerase Rpb1, domain 2 CH621_02630 PF04983 RNA polymerase Rpb1, domain 3 CH621_02630 PF04997 RNA polymerase Rpb1, domain 1 CH621_02630 PF04998 RNA polymerase Rpb1, domain 5 CH621_02630 PF05000 RNA polymerase Rpb1, domain 4 CH621_02635 PF03595 Voltage-dependent anion channel CH621_02640 PF01980 Uncharacterised protein family UPF0066 CH621_02645 PF01040 UbiA prenyltransferase family CH621_02655 PF03350 CH621_02655 CH621_02660 PF00356 Bacterial regulatory proteins, lacI family CH621_02660 PF13377 Periplasmic binding protein-like domain CH621_02665 PF00294 pfkB family carbohydrate kinase CH621_02670 PF13407 Periplasmic binding protein domain CH621_02675 PF02653 CH621_02675 CH621_02680 PF00005 ABC transporter CH621_02685 PF05025 RbsD / FucU transport protein family CH621_02690 PF02646 CH621_02690 CH621_02695 PF01266 FAD dependent oxidoreductase CH621_02700 PF13416 Bacterial extracellular solute-binding protein CH621_02705 PF00004 ATPase family associated with various cellular activities (AAA) CH621_02705 PF07724 AAA domain (Cdc48 subfamily) CH621_02705 PF10431 C-terminal, D2-small domain, of ClpB protein CH621_02710 PF00227 Proteasome subunit CH621_02715 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CH621_02725 PF02664 S-Ribosylhomocysteinase (LuxS) CH621_02730 PF09335 CH621_02730 CH621_02735 PF13419 Haloacid dehalogenase-like hydrolase CH621_02740 PF00874 PRD domain CH621_02745 PF02527 rRNA small subunit methyltransferase G CH621_02750 PF03899 CH621_02750 CH621_02755 PF00119 ATP synthase A chain CH621_02760 PF00137 ATP synthase subunit C CH621_02765 PF00430 ATP synthase B/B' CF(0) CH621_02770 PF00213 ATP synthase delta (OSCP) subunit CH621_02775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH621_02775 PF00306 ATP synthase alpha/beta chain, C terminal domain CH621_02775 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH621_02780 PF00231 ATP synthase CH621_02785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH621_02785 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH621_02790 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CH621_02795 PF03222 Tryptophan/tyrosine permease family CH621_02805 PF01502 Phosphoribosyl-AMP cyclohydrolase CH621_02805 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CH621_02810 PF00977 Histidine biosynthesis protein CH621_02815 PF00977 Histidine biosynthesis protein CH621_02820 PF00117 Glutamine amidotransferase class-I CH621_02825 PF00475 Imidazoleglycerol-phosphate dehydratase CH621_02825 PF13242 HAD-hyrolase-like CH621_02830 PF00155 Aminotransferase class I and II CH621_02835 PF00815 Histidinol dehydrogenase CH621_02840 PF01634 ATP phosphoribosyltransferase CH621_02840 PF08029 HisG, C-terminal domain CH621_02845 PF03755 CH621_02845 CH621_02845 PF08340 CH621_02845 CH621_02850 PF01571 Aminomethyltransferase folate-binding domain CH621_02855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH621_02855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH621_02860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH621_02865 PF04055 Radical SAM superfamily CH621_02865 PF06969 HemN C-terminal domain CH621_02870 PF00004 ATPase family associated with various cellular activities (AAA) CH621_02870 PF02190 ATP-dependent protease La (LON) domain CH621_02870 PF05362 Lon protease (S16) C-terminal proteolytic domain CH621_02875 PF04393 CH621_02875 CH621_02880 PF03819 MazG nucleotide pyrophosphohydrolase domain CH621_02885 PF00156 Phosphoribosyl transferase domain CH621_02890 PF00639 PPIC-type PPIASE domain CH621_02890 PF09312 SurA N-terminal domain CH621_02895 PF02618 YceG-like family CH621_02900 PF02223 Thymidylate kinase CH621_02905 PF03797 Autotransporter beta-domain CH621_02910 PF09115 DNA polymerase III, delta subunit, C terminal CH621_02910 PF13177 DNA polymerase III, delta subunit CH621_02915 PF01026 TatD related DNase CH621_02920 PF07509 CH621_02920 CH621_02925 PF00571 CBS domain CH621_02925 PF01595 CH621_02925 CH621_02925 PF03471 Transporter associated domain CH621_02930 PF17375 CH621_02930 CH621_02935 PF09827 CRISPR associated protein Cas2 CH621_02945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH621_02945 PF00381 PTS HPr component phosphorylation site CH621_02950 PF00294 pfkB family carbohydrate kinase CH621_02955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH621_02965 PF03840 Preprotein translocase SecG subunit CH621_02970 PF01131 DNA topoisomerase CH621_02970 PF01751 Toprim domain CH621_02975 PF02132 RecR protein CH621_02975 PF13662 Toprim domain CH621_02980 PF02575 YbaB/EbfC DNA-binding family CH621_02985 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ CH621_02990 PF00905 Penicillin binding protein transpeptidase domain CH621_02990 PF00912 Transglycosylase CH621_02990 PF17092 CH621_02990 CH621_02995 PF11104 Type IV pilus assembly protein PilM; CH621_03010 PF04351 Pilus assembly protein, PilP CH621_03015 PF00263 CH621_03015 CH621_03015 PF03958 Bacterial type II/III secretion system short domain CH621_03020 PF00156 Phosphoribosyl transferase domain CH621_03025 PF01106 NifU-like domain CH621_03025 PF01521 Iron-sulphur cluster biosynthesis CH621_03030 PF00293 NUDIX domain CH621_03030 PF09297 NADH pyrophosphatase zinc ribbon domain CH621_03035 PF04222 Protein of unknown function (DUF416) CH621_03040 PF00216 Bacterial DNA-binding protein CH621_03045 PF01380 SIS domain CH621_03045 PF13522 Glutamine amidotransferase domain CH621_03050 PF02600 Disulfide bond formation protein DsbB CH621_03055 PF06450 CH621_03055 CH621_03060 PF00392 Bacterial regulatory proteins, gntR family CH621_03060 PF07840 FadR C-terminal domain CH621_03065 PF13091 PLD-like domain CH621_03070 PF00588 SpoU rRNA Methylase family CH621_03070 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH621_03075 PF05175 Methyltransferase small domain CH621_03080 PF00270 DEAD/DEAH box helicase CH621_03080 PF00271 Helicase conserved C-terminal domain CH621_03085 PF01136 CH621_03085 CH621_03085 PF16325 CH621_03085 CH621_03090 PF00083 Sugar (and other) transporter CH621_03095 PF02581 Thiamine monophosphate synthase/TENI CH621_03100 PF08543 Phosphomethylpyrimidine kinase CH621_03105 PF02110 Hydroxyethylthiazole kinase family CH621_03110 PF02462 Opacity family porin protein CH621_03115 PF00575 S1 RNA binding domain CH621_03115 PF10150 Ribonuclease E/G family CH621_03115 PF12111 Polyribonucleotide phosphorylase C terminal CH621_03120 PF00849 RNA pseudouridylate synthase CH621_03120 PF01479 S4 domain CH621_03125 PF17209 CH621_03125 CH621_03130 PF00158 Sigma-54 interaction domain CH621_03135 PF01551 Peptidase family M23 CH621_03140 PF00005 ABC transporter CH621_03145 PF00950 CH621_03145 CH621_03150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CH621_03155 PF08543 Phosphomethylpyrimidine kinase CH621_03160 PF01171 PP-loop family CH621_03160 PF09179 TilS substrate binding domain CH621_03160 PF11734 TilS substrate C-terminal domain CH621_03165 PF02976 DNA mismatch repair enzyme MutH CH621_03170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH621_03170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH621_03180 PF04175 Protein of unknown function (DUF406) CH621_03185 PF00149 Calcineurin-like phosphoesterase CH621_03190 PF00293 NUDIX domain CH621_03195 PF02601 CH621_03195 CH621_03195 PF13742 CH621_03195 CH621_03200 PF08007 Cupin superfamily protein CH621_03205 PF03658 RnfH family Ubiquitin CH621_03210 PF01195 Peptidyl-tRNA hydrolase CH621_03215 PF01926 50S ribosome-binding GTPase CH621_03215 PF06071 Protein of unknown function (DUF933) CH621_03225 PF00570 HRDC domain CH621_03225 PF01612 3'-5' exonuclease CH621_03230 PF00501 AMP-binding enzyme CH621_03230 PF13193 AMP-binding enzyme C-terminal domain CH621_03235 PF03843 CH621_03235 CH621_03240 PF00814 Glycoprotease family CH621_03245 PF06733 DEAD_2 CH621_03245 PF13307 Helicase C-terminal domain CH621_03250 PF03061 Thioesterase superfamily CH621_03255 PF01618 CH621_03255 CH621_03260 PF02472 Biopolymer transport protein ExbD/TolR CH621_03265 PF06519 TolA C-terminal CH621_03270 PF04052 TolB amino-terminal domain CH621_03270 PF07676 WD40-like Beta Propeller Repeat CH621_03275 PF00691 OmpA family CH621_03320 PF00145 C-5 cytosine-specific DNA methylase CH621_03335 PF04381 Putative exonuclease, RdgC CH621_03345 PF00436 Single-strand binding protein family CH621_03355 PF03837 CH621_03355 CH621_03370 PF01555 DNA methylase CH621_03375 PF10548 CH621_03375 CH621_03375 PF13392 HNH endonuclease CH621_03400 PF07411 Domain of unknown function (DUF1508) CH621_03405 PF12686 CH621_03405 CH621_03410 PF00717 Peptidase S24-like CH621_03410 PF01381 Helix-turn-helix CH621_03415 PF15943 CH621_03415 CH621_03420 PF03374 CH621_03420 CH621_03420 PF08346 CH621_03420 CH621_03425 PF13730 CH621_03425 CH621_03430 PF06992 CH621_03430 CH621_03440 PF05772 NinB protein CH621_03445 PF05766 CH621_03445 CH621_03465 PF00959 Phage lysozyme CH621_03470 PF10828 CH621_03470 CH621_03480 PF07278 CH621_03480 CH621_03485 PF05876 CH621_03485 CH621_03495 PF05136 CH621_03495 CH621_03500 PF00574 Clp protease CH621_03500 PF10124 CH621_03500 CH621_03505 PF09956 CH621_03505 CH621_03510 PF13856 ATP-binding sugar transporter from pro-phage CH621_03515 PF06763 CH621_03515 CH621_03520 PF06141 Phage minor tail protein U CH621_03535 PF13227 CH621_03535 CH621_03540 PF05973 CH621_03540 CH621_03545 PF13744 Helix-turn-helix domain CH621_03560 PF05939 CH621_03560 CH621_03565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CH621_03570 PF10547 CH621_03570 CH621_03570 PF10548 CH621_03570 CH621_03575 PF10547 CH621_03575 CH621_03580 PF05100 CH621_03580 CH621_03585 PF00877 NlpC/P60 family CH621_03585 PF14464 Prokaryotic homologs of the JAB domain CH621_03590 PF06805 CH621_03590 CH621_03595 PF13550 CH621_03595 CH621_03600 PF07484 Phage Tail Collar Domain CH621_03615 PF00588 SpoU rRNA Methylase family CH621_03625 PF00266 Aminotransferase class-V CH621_03630 PF01592 NifU-like N terminal domain CH621_03635 PF01521 Iron-sulphur cluster biosynthesis CH621_03640 PF07743 HSCB C-terminal oligomerisation domain CH621_03645 PF10946 CH621_03645 CH621_03650 PF00012 Hsp70 protein CH621_03655 PF00111 2Fe-2S iron-sulfur cluster binding domain CH621_03660 PF04384 Iron-sulphur cluster assembly CH621_03665 PF09976 Tetratricopeptide repeat CH621_03670 PF03129 Anticodon binding domain CH621_03670 PF13393 Histidyl-tRNA synthetase CH621_03675 PF04551 GcpE protein CH621_03680 PF13413 Helix-turn-helix domain CH621_03680 PF13464 CH621_03680 CH621_03690 PF04055 Radical SAM superfamily CH621_03695 PF00768 D-alanyl-D-alanine carboxypeptidase CH621_03705 PF01297 Periplasmic solute binding protein family CH621_03710 PF00005 ABC transporter CH621_03715 PF00950 CH621_03715 CH621_03720 PF00950 CH621_03720 CH621_03725 PF03070 TENA/THI-4/PQQC family CH621_03730 PF09084 NMT1/THI5 like CH621_03735 PF00528 Binding-protein-dependent transport system inner membrane component CH621_03740 PF00005 ABC transporter CH621_03745 PF06002 Alpha-2,3-sialyltransferase (CST-I) CH621_03750 PF01370 NAD dependent epimerase/dehydratase family CH621_03755 PF07690 Major Facilitator Superfamily CH621_03760 PF00406 Adenylate kinase CH621_03760 PF05191 Adenylate kinase, active site lid CH621_03765 PF03264 NapC/NirT cytochrome c family, N-terminal region CH621_03770 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CH621_03775 PF12801 CH621_03775 CH621_03775 PF12837 4Fe-4S binding domain CH621_03780 PF12800 4Fe-4S binding domain CH621_03780 PF12838 4Fe-4S dicluster domain CH621_03785 PF00384 Molybdopterin oxidoreductase CH621_03785 PF01568 Molydopterin dinucleotide binding domain CH621_03785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH621_03785 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH621_03790 PF03927 NapD protein CH621_03795 PF13187 4Fe-4S dicluster domain CH621_03800 PF04320 CH621_03800 CH621_03805 PF02390 Putative methyltransferase CH621_03810 PF00270 DEAD/DEAH box helicase CH621_03810 PF00271 Helicase conserved C-terminal domain CH621_03815 PF01594 CH621_03815 CH621_03820 PF00543 Nitrogen regulatory protein P-II CH621_03825 PF00994 Probable molybdopterin binding domain CH621_03830 PF01219 Prokaryotic diacylglycerol kinase CH621_03835 PF02824 TGS domain CH621_03835 PF04607 Region found in RelA / SpoT proteins CH621_03835 PF13291 ACT domain CH621_03835 PF13328 HD domain CH621_03840 PF01938 TRAM domain CH621_03840 PF05958 tRNA (Uracil-5-)-methyltransferase CH621_03845 PF02565 Recombination protein O C terminal CH621_03845 PF11967 Recombination protein O N terminal CH621_03850 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CH621_03855 PF04225 Opacity-associated protein A LysM-like domain CH621_03855 PF08525 CH621_03855 CH621_03860 PF04055 Radical SAM superfamily CH621_03860 PF13394 4Fe-4S single cluster domain CH621_03865 PF01132 Elongation factor P (EF-P) OB domain CH621_03865 PF08207 Elongation factor P (EF-P) KOW-like domain CH621_03865 PF09285 Elongation factor P, C-terminal CH621_03875 PF07445 Primosomal replication protein priB and priC CH621_03880 PF03553 CH621_03880 CH621_03880 PF13726 CH621_03880 CH621_03885 PF00929 Exonuclease CH621_03890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH621_03895 PF01850 PIN domain CH621_03900 PF04014 Antidote-toxin recognition MazE CH621_03905 PF13649 Methyltransferase domain CH621_03910 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CH621_03915 PF00152 tRNA synthetases class II (D, K and N) CH621_03915 PF01336 OB-fold nucleic acid binding domain CH621_03915 PF02938 GAD domain CH621_03920 PF00293 NUDIX domain CH621_03925 PF01709 Transcriptional regulator CH621_03930 PF02075 Crossover junction endodeoxyribonuclease RuvC CH621_03935 PF01330 RuvA N terminal domain CH621_03935 PF07499 RuvA, C-terminal domain CH621_03935 PF14520 Helix-hairpin-helix domain CH621_03940 PF05491 Holliday junction DNA helicase ruvB C-terminus CH621_03940 PF05496 Holliday junction DNA helicase ruvB N-terminus CH621_03945 PF17274 CH621_03945 CH621_03950 PF00589 Phage integrase family CH621_03950 PF02899 Phage integrase, N-terminal SAM-like domain CH621_03955 PF12832 MFS_1 like family CH621_03960 PF03807 NADP oxidoreductase coenzyme F420-dependent CH621_03960 PF14748 Pyrroline-5-carboxylate reductase dimerisation CH621_03965 PF03090 CH621_03965 CH621_03965 PF08708 Primase C terminal 1 (PriCT-1) CH621_03970 PF12728 Helix-turn-helix domain CH621_03990 PF01381 Helix-turn-helix CH621_03995 PF00589 Phage integrase family CH621_03995 PF13356 Domain of unknown function (DUF4102) CH621_04005 PF03652 Uncharacterised protein family (UPF0081) CH621_04010 PF02622 Uncharacterized ACR, COG1678 CH621_04015 PF04452 RNA methyltransferase CH621_04020 PF00795 Carbon-nitrogen hydrolase CH621_04025 PF00571 CBS domain CH621_04025 PF03471 Transporter associated domain CH621_04030 PF01510 N-acetylmuramoyl-L-alanine amidase CH621_04035 PF07963 Prokaryotic N-terminal methylation motif CH621_04040 PF00437 Type II/IV secretion system protein CH621_04040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CH621_04045 PF00482 Type II secretion system (T2SS), protein F CH621_04050 PF01478 Type IV leader peptidase family CH621_04055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH621_04055 PF07497 Rho termination factor, RNA-binding domain CH621_04055 PF07498 Rho termination factor, N-terminal domain CH621_04060 PF01340 Met Apo-repressor, MetJ CH621_04065 PF00376 MerR family regulatory protein CH621_04065 PF09278 MerR, DNA binding CH621_04070 PF00403 Heavy-metal-associated domain CH621_04075 PF00403 Heavy-metal-associated domain CH621_04080 PF00122 E1-E2 ATPase CH621_04080 PF00403 Heavy-metal-associated domain CH621_04080 PF00702 haloacid dehalogenase-like hydrolase CH621_04085 PF03222 Tryptophan/tyrosine permease family CH621_04090 PF03313 CH621_04090 CH621_04090 PF03315 Serine dehydratase beta chain CH621_04095 PF03222 Tryptophan/tyrosine permease family CH621_04100 PF00155 Aminotransferase class I and II CH621_04110 PF00425 chorismate binding enzyme CH621_04115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH621_04115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH621_04115 PF16582 CH621_04115 CH621_04120 PF00561 alpha/beta hydrolase fold CH621_04125 PF07690 Major Facilitator Superfamily CH621_04130 PF01048 Phosphorylase superfamily CH621_04135 PF03473 MOSC domain CH621_04140 PF02810 SEC-C motif CH621_04145 PF03631 CH621_04145 CH621_04150 PF00884 Sulfatase CH621_04175 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH621_04185 PF01138 3' exoribonuclease family, domain 1 CH621_04185 PF03725 3' exoribonuclease family, domain 2 CH621_04190 PF00156 Phosphoribosyl transferase domain CH621_04195 PF00226 DnaJ domain CH621_04195 PF05099 Tellurite resistance protein TerB CH621_04205 PF00140 Sigma-70 factor, region 1 CH621_04205 PF04542 Sigma-70 region 2 CH621_04205 PF04545 Sigma-70, region 4 CH621_04210 PF01565 FAD binding domain CH621_04210 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CH621_04220 PF02660 CH621_04220 CH621_04225 PF02152 Dihydroneopterin aldolase CH621_04230 PF05860 haemagglutination activity domain CH621_04235 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH621_04235 PF08479 POTRA domain, ShlB-type CH621_04240 PF00593 TonB dependent receptor CH621_04240 PF07715 TonB-dependent Receptor Plug Domain CH621_04245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH621_04250 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family CH621_04255 PF01725 Ham1 family CH621_04265 PF01501 Glycosyl transferase family 8 CH621_04275 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CH621_04280 PF06804 NlpB/DapX lipoprotein CH621_04285 PF00701 Dihydrodipicolinate synthetase family CH621_04290 PF00578 AhpC/TSA family CH621_04295 PF01618 CH621_04295 CH621_04300 PF02472 Biopolymer transport protein ExbD/TolR CH621_04305 PF03544 Gram-negative bacterial TonB protein C-terminal CH621_04305 PF16031 CH621_04305 CH621_04310 PF00436 Single-strand binding protein family CH621_04315 PF00005 ABC transporter CH621_04320 PF02395 Immunoglobulin A1 protease CH621_04320 PF03212 Pertactin CH621_04330 PF02547 Queuosine biosynthesis protein CH621_04335 PF01702 Queuine tRNA-ribosyltransferase CH621_04340 PF01814 Hemerythrin HHE cation binding domain CH621_04345 PF01206 Sulfurtransferase TusA CH621_04350 PF02699 Preprotein translocase subunit CH621_04355 PF02355 Protein export membrane protein CH621_04355 PF07549 SecD/SecF GG Motif CH621_04355 PF13721 SecD export protein N-terminal TM region CH621_04360 PF02355 Protein export membrane protein CH621_04360 PF07549 SecD/SecF GG Motif CH621_04365 PF01594 CH621_04365 CH621_04370 PF03960 ArsC family CH621_04375 PF03889 CH621_04375 CH621_04380 PF17347 CH621_04380 CH621_04385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH621_04385 PF01464 Transglycosylase SLT domain CH621_04390 PF00270 DEAD/DEAH box helicase CH621_04390 PF00271 Helicase conserved C-terminal domain CH621_04390 PF03880 DbpA RNA binding domain CH621_04400 PF00013 KH domain CH621_04400 PF00575 S1 RNA binding domain CH621_04400 PF01138 3' exoribonuclease family, domain 1 CH621_04400 PF03725 3' exoribonuclease family, domain 2 CH621_04400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CH621_04410 PF04074 Domain of unknown function (DUF386) CH621_04415 PF05525 CH621_04415 CH621_04420 PF06965 Na+/H+ antiporter 1 CH621_04425 PF01037 AsnC family CH621_04425 PF13412 Winged helix-turn-helix DNA-binding CH621_04430 PF00892 EamA-like transporter family CH621_04435 PF00117 Glutamine amidotransferase class-I CH621_04435 PF00958 GMP synthase C terminal domain CH621_04435 PF02540 NAD synthase CH621_04440 PF00478 IMP dehydrogenase / GMP reductase domain CH621_04440 PF00571 CBS domain CH621_04445 PF02237 Biotin protein ligase C terminal domain CH621_04445 PF03099 Biotin/lipoate A/B protein ligase family CH621_04470 PF03167 Uracil DNA glycosylase superfamily CH621_04475 PF00072 Response regulator receiver domain CH621_04475 PF00512 His Kinase A (phospho-acceptor) domain CH621_04475 PF01627 Hpt domain CH621_04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH621_04480 PF04224 CH621_04480 CH621_04485 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CH621_04485 PF04851 Type III restriction enzyme, res subunit CH621_04485 PF12008 Type I restriction and modification enzyme - subunit R C terminal CH621_04490 PF13310 CH621_04490 CH621_04495 PF13166 CH621_04495 CH621_04500 PF01420 Type I restriction modification DNA specificity domain CH621_04510 PF01432 Peptidase family M3 CH621_04515 PF04304 CH621_04515 CH621_04520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH621_04525 PF00925 GTP cyclohydrolase II CH621_04530 PF01569 PAP2 superfamily CH621_04535 PF02086 D12 class N6 adenine-specific DNA methyltransferase CH621_04540 PF01761 3-dehydroquinate synthase CH621_04545 PF01202 Shikimate kinase CH621_04550 PF00149 Calcineurin-like phosphoesterase CH621_04550 PF02872 5'-nucleotidase, C-terminal domain CH621_04560 PF00886 Ribosomal protein S16 CH621_04565 PF01782 RimM N-terminal domain CH621_04565 PF05239 PRC-barrel domain CH621_04570 PF01746 tRNA (Guanine-1)-methyltransferase CH621_04575 PF01245 Ribosomal protein L19 CH621_04585 PF03279 CH621_04585 CH621_04590 PF01925 CH621_04590 CH621_04595 PF03411 Penicillin-insensitive murein endopeptidase CH621_04600 PF01264 Chorismate synthase CH621_04605 PF00924 Mechanosensitive ion channel CH621_04605 PF12794 CH621_04605 CH621_04605 PF12795 CH621_04605 CH621_04610 PF00501 AMP-binding enzyme CH621_04615 PF03925 SeqA protein CH621_04615 PF17206 CH621_04615 CH621_04620 PF00561 alpha/beta hydrolase fold CH621_04625 PF00258 Flavodoxin CH621_04630 PF01475 Ferric uptake regulator family CH621_04635 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH621_04635 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CH621_04640 PF00902 Sec-independent protein translocase protein (TatC) CH621_04655 PF13411 MerR HTH family regulatory protein CH621_04660 PF00107 Zinc-binding dehydrogenase CH621_04660 PF08240 Alcohol dehydrogenase GroES-like domain CH621_04665 PF00756 Putative esterase CH621_04670 PF01235 CH621_04670 CH621_04675 PF00480 ROK family CH621_04680 PF01226 Formate/nitrite transporter CH621_04685 PF01228 Glycine radical CH621_04685 PF02901 Pyruvate formate lyase CH621_04690 PF04055 Radical SAM superfamily CH621_04690 PF13353 4Fe-4S single cluster domain CH621_04695 PF16747 CH621_04695 CH621_04700 PF13525 Outer membrane lipoprotein CH621_04705 PF00849 RNA pseudouridylate synthase CH621_04705 PF01479 S4 domain CH621_04710 PF02578 Multi-copper polyphenol oxidoreductase laccase CH621_04715 PF03054 tRNA methyl transferase CH621_04720 PF04400 CH621_04720 CH621_04725 PF02424 ApbE family CH621_04730 PF00111 2Fe-2S iron-sulfur cluster binding domain CH621_04730 PF00175 Oxidoreductase NAD-binding domain CH621_04730 PF00970 Oxidoreductase FAD-binding domain CH621_04735 PF02508 CH621_04735 CH621_04740 PF02508 CH621_04740 CH621_04745 PF04205 FMN-binding domain CH621_04750 PF03116 CH621_04750 CH621_04755 PF05896 CH621_04755 CH621_04755 PF11973 CH621_04755 CH621_04765 PF03923 CH621_04765 CH621_04770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH621_04770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH621_04775 PF02666 CH621_04775 CH621_04780 PF02620 CH621_04780 CH621_04785 PF01783 Ribosomal L32p protein family CH621_04790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH621_04790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH621_04800 PF00698 Acyl transferase domain CH621_04805 PF13561 Enoyl-(Acyl carrier protein) reductase CH621_04810 PF00550 Phosphopantetheine attachment site CH621_04815 PF03605 CH621_04815 CH621_04820 PF01648 4'-phosphopantetheinyl transferase superfamily CH621_04825 PF01145 SPFH domain / Band 7 family CH621_04830 PF01145 SPFH domain / Band 7 family CH621_04835 PF04191 Phospholipid methyltransferase CH621_04840 PF01344 Kelch motif CH621_04845 PF04290 CH621_04845 CH621_04845 PF06808 CH621_04845 CH621_04850 PF03480 Bacterial extracellular solute-binding protein, family 7 CH621_04855 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CH621_04860 PF00480 ROK family CH621_04865 PF01380 SIS domain CH621_04865 PF01418 Helix-turn-helix domain, rpiR family CH621_04870 PF00701 Dihydrodipicolinate synthetase family CH621_04875 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CH621_04880 PF01979 Amidohydrolase family CH621_04885 PF13609 Gram-negative porin CH621_04890 PF00075 RNase H CH621_04895 PF00929 Exonuclease CH621_04910 PF01926 50S ribosome-binding GTPase CH621_04910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CH621_04915 PF07690 Major Facilitator Superfamily CH621_04920 PF13502 CH621_04920 CH621_04925 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) CH621_04930 PF00485 Phosphoribulokinase / Uridine kinase family CH621_04935 PF00860 Permease family CH621_04940 PF00719 Inorganic pyrophosphatase CH621_04960 PF01066 CDP-alcohol phosphatidyltransferase CH621_04965 PF01053 Cys/Met metabolism PLP-dependent enzyme CH621_04975 PF01225 Mur ligase family, catalytic domain CH621_04975 PF02875 Mur ligase family, glutamate ligase domain CH621_04975 PF08245 Mur ligase middle domain CH621_04980 PF10063 CH621_04980 CH621_04985 PF01297 Periplasmic solute binding protein family CH621_04990 PF00899 ThiF family CH621_04995 PF03562 MltA specific insert domain CH621_04995 PF06725 3D domain CH621_05005 PF01170 Putative RNA methylase family UPF0020 CH621_05005 PF02926 THUMP domain CH621_05005 PF10672 S-adenosylmethionine-dependent methyltransferase CH621_05045 PF00593 TonB dependent receptor CH621_05045 PF07715 TonB-dependent Receptor Plug Domain CH621_05055 PF00043 Glutathione S-transferase, C-terminal domain CH621_05055 PF02798 Glutathione S-transferase, N-terminal domain CH621_05060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH621_05060 PF02403 Seryl-tRNA synthetase N-terminal domain CH621_05070 PF12821 CH621_05070 CH621_05075 PF06738 CH621_05075 CH621_05080 PF00571 CBS domain CH621_05080 PF01595 CH621_05080 CH621_05080 PF03471 Transporter associated domain CH621_05085 PF00448 SRP54-type protein, GTPase domain CH621_05085 PF02881 SRP54-type protein, helical bundle domain CH621_05085 PF02978 Signal peptide binding domain CH621_05095 PF01420 Type I restriction modification DNA specificity domain CH621_05105 PF02316 Mu DNA-binding domain CH621_05110 PF13693 Winged helix-turn-helix DNA-binding CH621_05115 PF02316 Mu DNA-binding domain CH621_05115 PF02914 Bacteriophage Mu transposase CH621_05115 PF09039 Mu DNA binding, I gamma subdomain CH621_05115 PF09299 Mu transposase, C-terminal CH621_05120 PF01381 Helix-turn-helix CH621_05120 PF09077 Mu B transposition protein, C terminal CH621_05120 PF13401 AAA domain CH621_05130 PF07352 Bacteriophage Mu Gam like protein CH621_05150 PF06252 CH621_05150 CH621_05155 PF08765 Mor transcription activator family CH621_05165 PF01510 N-acetylmuramoyl-L-alanine amidase CH621_05170 PF10841 CH621_05170 CH621_05175 PF10883 CH621_05175 CH621_05190 PF11985 CH621_05190 CH621_05195 PF03237 Terminase-like family CH621_05195 PF17289 CH621_05195 CH621_05200 PF06074 CH621_05200 CH621_05205 PF04233 CH621_05205 CH621_05215 PF05069 CH621_05215 CH621_05235 PF07030 CH621_05235 CH621_05240 PF09646 Gp37 protein CH621_05245 PF04984 Phage tail sheath protein CH621_05250 PF04985 CH621_05250 CH621_05255 PF10109 CH621_05255 CH621_05260 PF06528 CH621_05260 CH621_05270 PF10145 CH621_05270 CH621_05275 PF06995 CH621_05275 CH621_05280 PF05489 Phage Tail Protein X CH621_05285 PF05954 Phage late control gene D protein (GPD) CH621_05290 PF04717 Phage-related baseplate assembly protein CH621_05295 PF04965 Gene 25-like lysozyme CH621_05300 PF04865 CH621_05300 CH621_05305 PF09684 CH621_05305 CH621_05310 PF03406 CH621_05310 CH621_05310 PF07484 Phage Tail Collar Domain CH621_05325 PF10122 CH621_05325 CH621_05350 PF02384 N-6 DNA Methylase CH621_05350 PF12161 HsdM N-terminal domain CH621_05355 PF01784 NIF3 (NGG1p interacting factor 3) CH621_05360 PF00183 Hsp90 protein CH621_05360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH621_05365 PF03960 ArsC family CH621_05370 PF01546 Peptidase family M20/M25/M40 CH621_05370 PF07687 Peptidase dimerisation domain CH621_05375 PF02557 D-alanyl-D-alanine carboxypeptidase CH621_05380 PF00005 ABC transporter CH621_05385 PF00528 Binding-protein-dependent transport system inner membrane component CH621_05390 PF01547 Bacterial extracellular solute-binding protein CH621_05395 PF10119 CH621_05395 CH621_05395 PF13847 Methyltransferase domain CH621_05400 PF01168 Alanine racemase, N-terminal domain CH621_05405 PF00696 Amino acid kinase family CH621_05405 PF00742 Homoserine dehydrogenase CH621_05405 PF01842 ACT domain CH621_05405 PF03447 Homoserine dehydrogenase, NAD binding domain CH621_05405 PF13840 ACT domain CH621_05410 PF00288 GHMP kinases N terminal domain CH621_05410 PF08544 GHMP kinases C terminal CH621_05415 PF00291 Pyridoxal-phosphate dependent enzyme CH621_05415 PF14821 Threonine synthase N terminus CH621_05440 PF01053 Cys/Met metabolism PLP-dependent enzyme CH621_05445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH621_05445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH621_05450 PF00085 Thioredoxin CH621_05460 PF01026 TatD related DNase CH621_05465 PF02452 PemK-like protein CH621_05470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH621_05475 PF01406 tRNA synthetases class I (C) catalytic domain CH621_05475 PF09190 DALR domain CH621_05480 PF02551 Acyl-CoA thioesterase CH621_05485 PF03477 ATP cone domain CH621_05485 PF13597 Anaerobic ribonucleoside-triphosphate reductase CH621_05490 PF08780 Nucleotidyltransferase substrate binding protein like CH621_05495 PF01909 Nucleotidyltransferase domain CH621_05500 PF01025 GrpE CH621_05505 PF01513 ATP-NAD kinase CH621_05510 PF02463 RecF/RecN/SMC N terminal domain CH621_05515 PF03710 Glutamate-ammonia ligase adenylyltransferase CH621_05515 PF08335 GlnD PII-uridylyltransferase CH621_05520 PF01715 IPP transferase CH621_05525 PF01119 DNA mismatch repair protein, C-terminal domain CH621_05525 PF08676 MutL C terminal dimerisation domain CH621_05525 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH621_05530 PF01476 LysM domain CH621_05530 PF01520 N-acetylmuramoyl-L-alanine amidase CH621_05535 PF02367 Uncharacterised P-loop hydrolase UPF0079 CH621_05540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CH621_05545 PF01743 Poly A polymerase head domain CH621_05545 PF12626 Polymerase A arginine-rich C-terminus CH621_05545 PF12627 Probable RNA and SrmB- binding site of polymerase A CH621_05550 PF01258 Prokaryotic dksA/traR C4-type zinc finger CH621_05555 PF00753 Metallo-beta-lactamase superfamily CH621_05555 PF03772 CH621_05555 CH621_05555 PF13567 CH621_05555 CH621_05560 PF00005 ABC transporter CH621_05560 PF00664 ABC transporter transmembrane region CH621_05565 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CH621_05570 PF02348 Cytidylyltransferase CH621_05580 PF01541 GIY-YIG catalytic domain CH621_05580 PF02151 UvrB/uvrC motif CH621_05580 PF08459 UvrC Helix-hairpin-helix N-terminal CH621_05580 PF14520 Helix-hairpin-helix domain CH621_05585 PF03741 CH621_05585 CH621_05590 PF03786 D-mannonate dehydratase (UxuA) CH621_05595 PF00392 Bacterial regulatory proteins, gntR family CH621_05595 PF07729 FCD domain CH621_05600 PF00107 Zinc-binding dehydrogenase CH621_05600 PF08240 Alcohol dehydrogenase GroES-like domain CH621_05605 PF03480 Bacterial extracellular solute-binding protein, family 7 CH621_05610 PF04290 CH621_05610 CH621_05615 PF06808 CH621_05615 CH621_05620 PF00294 pfkB family carbohydrate kinase CH621_05625 PF00106 short chain dehydrogenase CH621_05630 PF01081 KDPG and KHG aldolase CH621_05635 PF03831 PhnA protein CH621_05635 PF08274 PhnA Zinc-Ribbon CH621_05640 PF09695 CH621_05640 CH621_05650 PF01027 Inhibitor of apoptosis-promoting Bax1 CH621_05655 PF05128 CH621_05655 CH621_05660 PF00849 RNA pseudouridylate synthase CH621_05665 PF03372 Endonuclease/Exonuclease/phosphatase family CH621_05670 PF05117 CH621_05670 CH621_05670 PF06877 Regulator of ribonuclease activity B CH621_05675 PF04093 CH621_05675 CH621_05680 PF04085 rod shape-determining protein MreC CH621_05685 PF06723 MreB/Mbl protein CH621_05690 PF00005 ABC transporter CH621_05690 PF06472 CH621_05690 CH621_05695 PF02080 TrkA-C domain CH621_05695 PF06826 CH621_05695 CH621_05700 PF02410 Oligomerisation domain CH621_05705 PF02590 Predicted SPOUT methyltransferase CH621_05710 PF00905 Penicillin binding protein transpeptidase domain CH621_05710 PF03717 Penicillin-binding Protein dimerisation domain CH621_05715 PF01098 CH621_05715 CH621_05720 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CH621_05720 PF05036 Sporulation related domain CH621_05725 PF00768 D-alanyl-D-alanine carboxypeptidase CH621_05725 PF07943 Penicillin-binding protein 5, C-terminal domain CH621_05730 PF04359 Protein of unknown function (DUF493) CH621_05735 PF03099 Biotin/lipoate A/B protein ligase family CH621_05740 PF04055 Radical SAM superfamily CH621_05740 PF16881 CH621_05740 CH621_05745 PF08218 Citrate lyase ligase C-terminal domain CH621_05750 PF06857 CH621_05750 CH621_05755 PF03328 HpcH/HpaI aldolase/citrate lyase family CH621_05760 PF04223 Citrate lyase, alpha subunit (CitF) CH621_05765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CH621_05765 PF03802 CH621_05765 CH621_05770 PF00939 Sodium:sulfate symporter transmembrane region CH621_05775 PF00919 Uncharacterized protein family UPF0004 CH621_05775 PF01938 TRAM domain CH621_05775 PF04055 Radical SAM superfamily CH621_05780 PF03167 Uracil DNA glycosylase superfamily CH621_05785 PF01228 Glycine radical CH621_05790 PF00009 Elongation factor Tu GTP binding domain CH621_05790 PF00679 Elongation factor G C-terminus CH621_05790 PF03144 Elongation factor Tu domain 2 CH621_05790 PF06421 GTP-binding protein LepA C-terminus CH621_05795 PF00717 Peptidase S24-like CH621_05795 PF10502 Signal peptidase, peptidase S26 CH621_05800 PF00035 Double-stranded RNA binding motif CH621_05800 PF14622 Ribonuclease-III-like CH621_05805 PF01926 50S ribosome-binding GTPase CH621_05805 PF07650 KH domain CH621_05810 PF05175 Methyltransferase small domain CH621_05810 PF08468 Methyltransferase small domain N-terminal CH621_05815 PF03603 DNA polymerase III psi subunit CH621_05820 PF00583 Acetyltransferase (GNAT) family CH621_05825 PF04216 Protein involved in formate dehydrogenase formation CH621_05830 PF01292 Prokaryotic cytochrome b561 CH621_05835 PF09163 Formate dehydrogenase N, transmembrane CH621_05835 PF13247 4Fe-4S dicluster domain CH621_05840 PF00384 Molybdopterin oxidoreductase CH621_05840 PF01568 Molydopterin dinucleotide binding domain CH621_05845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH621_05850 PF02634 FdhD/NarQ family CH621_05855 PF02130 Uncharacterized protein family UPF0054 CH621_05860 PF08282 haloacid dehalogenase-like hydrolase CH621_05865 PF00501 AMP-binding enzyme CH621_05870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH621_05870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH621_05875 PF00625 Guanylate kinase CH621_05885 PF02824 TGS domain CH621_05885 PF04607 Region found in RelA / SpoT proteins CH621_05885 PF13291 ACT domain CH621_05885 PF13328 HD domain CH621_05890 PF00270 DEAD/DEAH box helicase CH621_05890 PF00271 Helicase conserved C-terminal domain CH621_05890 PF17191 CH621_05890 CH621_05895 PF01177 Asp/Glu/Hydantoin racemase CH621_05900 PF01070 FMN-dependent dehydrogenase CH621_05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_05930 PF03466 LysR substrate binding domain CH621_05935 PF03591 CH621_05935 CH621_05940 PF05437 CH621_05940 CH621_05945 PF10688 CH621_05945 CH621_05950 PF00009 Elongation factor Tu GTP binding domain CH621_05950 PF03144 Elongation factor Tu domain 2 CH621_05950 PF16658 CH621_05950 CH621_05955 PF13561 Enoyl-(Acyl carrier protein) reductase CH621_05960 PF00575 S1 RNA binding domain CH621_05960 PF00773 RNB domain CH621_05960 PF08206 Ribonuclease B OB domain CH621_05965 PF02682 Allophanate hydrolase subunit 1 CH621_05970 PF02626 Allophanate hydrolase subunit 2 CH621_05975 PF03746 LamB/YcsF family CH621_05980 PF01566 CH621_05980 CH621_05985 PF00764 Arginosuccinate synthase CH621_05990 PF01259 SAICAR synthetase CH621_05995 PF00905 Penicillin binding protein transpeptidase domain CH621_05995 PF00912 Transglycosylase CH621_05995 PF14814 Bifunctional transglycosylase second domain CH621_06000 PF06062 CH621_06000 CH621_06005 PF01521 Iron-sulphur cluster biosynthesis CH621_06010 PF00557 Metallopeptidase family M24 CH621_06015 PF01966 HD domain CH621_06015 PF03445 CH621_06015 CH621_06015 PF08335 GlnD PII-uridylyltransferase CH621_06020 PF00953 Glycosyl transferase family 4 CH621_06030 PF00929 Exonuclease CH621_06035 PF03193 Protein of unknown function, DUF258 CH621_06040 PF00381 PTS HPr component phosphorylation site CH621_06045 PF00391 PEP-utilising enzyme, mobile domain CH621_06045 PF02896 PEP-utilising enzyme, TIM barrel domain CH621_06045 PF05524 PEP-utilising enzyme, N-terminal CH621_06050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH621_06060 PF04076 Bacterial OB fold (BOF) protein CH621_06070 PF00512 His Kinase A (phospho-acceptor) domain CH621_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH621_06070 PF08521 CH621_06070 CH621_06075 PF02028 BCCT family transporter CH621_06080 PF00883 Cytosol aminopeptidase family, catalytic domain CH621_06080 PF02789 Cytosol aminopeptidase family, N-terminal domain CH621_06085 PF03739 CH621_06085 CH621_06090 PF03739 CH621_06090 CH621_06095 PF01717 Cobalamin-independent synthase, Catalytic domain CH621_06095 PF08267 Cobalamin-independent synthase, N-terminal domain CH621_06100 PF02698 DUF218 domain CH621_06105 PF01943 CH621_06105 CH621_06110 PF07922 Glycosyltransferase family 52 CH621_06115 PF00534 Glycosyl transferases group 1 CH621_06115 PF13439 Glycosyltransferase Family 4 CH621_06120 PF01755 CH621_06120 CH621_06125 PF00535 Glycosyl transferase family 2 CH621_06130 PF00535 Glycosyl transferase family 2 CH621_06135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_06135 PF03459 TOBE domain CH621_06140 PF13531 Bacterial extracellular solute-binding protein CH621_06145 PF00528 Binding-protein-dependent transport system inner membrane component CH621_06150 PF00005 ABC transporter CH621_06150 PF03459 TOBE domain CH621_06155 PF00209 Sodium:neurotransmitter symporter family CH621_06160 PF00633 Helix-hairpin-helix motif CH621_06160 PF00730 HhH-GPD superfamily base excision DNA repair protein CH621_06160 PF10576 Iron-sulfur binding domain of endonuclease III CH621_06165 PF02508 CH621_06165 CH621_06170 PF04205 FMN-binding domain CH621_06175 PF03116 CH621_06175 CH621_06180 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH621_06180 PF10531 SLBB domain CH621_06180 PF12838 4Fe-4S dicluster domain CH621_06180 PF13375 RnfC Barrel sandwich hybrid domain CH621_06185 PF04060 Putative Fe-S cluster CH621_06185 PF14697 4Fe-4S dicluster domain CH621_06190 PF02508 CH621_06190 CH621_06200 PF01343 Peptidase family S49 CH621_06200 PF08496 CH621_06200 CH621_06205 PF09829 CH621_06205 CH621_06210 PF12805 CH621_06210 CH621_06210 PF13515 CH621_06210 CH621_06220 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH621_06225 PF05860 haemagglutination activity domain CH621_06225 PF13018 CH621_06225 CH621_06230 PF08282 haloacid dehalogenase-like hydrolase CH621_06235 PF00571 CBS domain CH621_06235 PF01380 SIS domain CH621_06245 PF01814 Hemerythrin HHE cation binding domain CH621_06245 PF04405 CH621_06245 CH621_06250 PF04055 Radical SAM superfamily CH621_06250 PF06463 Molybdenum Cofactor Synthesis C CH621_06250 PF13353 4Fe-4S single cluster domain CH621_06255 PF01967 MoaC family CH621_06260 PF02597 ThiS family CH621_06265 PF02391 MoaE protein CH621_06270 PF02470 CH621_06270 CH621_06275 PF04403 CH621_06275 CH621_06285 PF00595 PDZ domain (Also known as DHR or GLGF) CH621_06285 PF03572 Peptidase family S41 CH621_06285 PF11818 CH621_06285 CH621_06290 PF03734 L,D-transpeptidase catalytic domain CH621_06295 PF05951 CH621_06295 CH621_06300 PF01026 TatD related DNase CH621_06305 PF00753 Metallo-beta-lactamase superfamily CH621_06310 PF00676 Dehydrogenase E1 component CH621_06310 PF02779 Transketolase, pyrimidine binding domain CH621_06310 PF16078 CH621_06310 CH621_06310 PF16870 CH621_06310 CH621_06315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH621_06315 PF00364 Biotin-requiring enzyme CH621_06315 PF02817 e3 binding domain CH621_06320 PF00268 Ribonucleotide reductase, small chain CH621_06325 PF00317 Ribonucleotide reductase, all-alpha domain CH621_06325 PF02867 Ribonucleotide reductase, barrel domain CH621_06325 PF03477 ATP cone domain CH621_06330 PF04972 BON domain CH621_06335 PF13580 SIS domain CH621_06340 PF02021 Uncharacterised protein family UPF0102 CH621_06345 PF04348 LppC putative lipoprotein CH621_06350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH621_06355 PF01523 Putative modulator of DNA gyrase CH621_06360 PF00877 NlpC/P60 family CH621_06380 PF01565 FAD binding domain CH621_06380 PF09330 D-lactate dehydrogenase, membrane binding CH621_06385 PF01174 SNO glutamine amidotransferase family CH621_06390 PF01680 SOR/SNZ family CH621_06395 PF02224 Cytidylate kinase CH621_06400 PF00575 S1 RNA binding domain CH621_06405 PF00216 Bacterial DNA-binding protein CH621_06410 PF06305 CH621_06410 CH621_06415 PF14559 Tetratricopeptide repeat CH621_06420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CH621_06425 PF01253 Translation initiation factor SUI1 CH621_06430 PF00308 Bacterial dnaA protein CH621_06435 PF00860 Permease family CH621_06440 PF14681 Uracil phosphoribosyltransferase CH621_06445 PF12169 DNA polymerase III subunits gamma and tau domain III CH621_06445 PF12170 DNA polymerase III tau subunit V interacting with alpha CH621_06445 PF13177 DNA polymerase III, delta subunit CH621_06450 PF00156 Phosphoribosyl transferase domain CH621_06455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH621_06455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH621_06460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH621_06460 PF00364 Biotin-requiring enzyme CH621_06460 PF02817 e3 binding domain CH621_06465 PF00456 Transketolase, thiamine diphosphate binding domain CH621_06470 PF02142 MGS-like domain CH621_06475 PF06097 CH621_06475 CH621_06480 PF00012 Hsp70 protein CH621_06485 PF00226 DnaJ domain CH621_06485 PF00684 DnaJ central domain CH621_06485 PF01556 DnaJ C terminal domain CH621_06490 PF00171 Aldehyde dehydrogenase family CH621_06495 PF03458 CH621_06495 CH621_06505 PF07690 Major Facilitator Superfamily CH621_06510 PF00849 RNA pseudouridylate synthase CH621_06510 PF01479 S4 domain CH621_06515 PF08942 Domain of unknown function (DUF1919) CH621_06520 PF00390 Malic enzyme, N-terminal domain CH621_06520 PF01515 Phosphate acetyl/butaryl transferase CH621_06520 PF03949 Malic enzyme, NAD binding domain CH621_06525 PF00884 Sulfatase CH621_06530 PF00271 Helicase conserved C-terminal domain CH621_06530 PF02151 UvrB/uvrC motif CH621_06530 PF04851 Type III restriction enzyme, res subunit CH621_06530 PF12344 Ultra-violet resistance protein B CH621_06540 PF03824 CH621_06540 CH621_06545 PF06226 CH621_06545 CH621_06550 PF05015 Plasmid maintenance system killer protein CH621_06555 PF01381 Helix-turn-helix CH621_06560 PF00005 ABC transporter CH621_06560 PF12848 ABC transporter CH621_06565 PF04247 CH621_06565 CH621_06570 PF05127 Helicase CH621_06570 PF08351 Domain of unknown function (DUF1726) CH621_06570 PF13718 GNAT acetyltransferase 2 CH621_06570 PF17176 CH621_06570 CH621_06575 PF00270 DEAD/DEAH box helicase CH621_06575 PF00271 Helicase conserved C-terminal domain CH621_06575 PF02559 CarD-like/TRCF domain CH621_06575 PF03461 TRCF domain CH621_06580 PF00595 PDZ domain (Also known as DHR or GLGF) CH621_06580 PF13365 Trypsin-like peptidase domain CH621_06585 PF01039 Carboxyl transferase domain CH621_06590 PF08245 Mur ligase middle domain CH621_06595 PF02698 DUF218 domain CH621_06600 PF00561 alpha/beta hydrolase fold CH621_06605 PF00521 DNA gyrase/topoisomerase IV, subunit A CH621_06605 PF03989 DNA gyrase C-terminal domain, beta-propeller CH621_06615 PF02624 YcaO-like family CH621_06625 PF01497 Periplasmic binding protein CH621_06630 PF01032 FecCD transport family CH621_06640 PF13649 Methyltransferase domain CH621_06645 PF12706 Beta-lactamase superfamily domain CH621_06645 PF16123 CH621_06645 CH621_06650 PF03848 Tellurite resistance protein TehB CH621_06650 PF09313 Domain of unknown function (DUF1971) CH621_06655 PF01588 Putative tRNA binding domain CH621_06655 PF09334 tRNA synthetases class I (M) CH621_06660 PF10609 ParA/MinD ATPase like CH621_06665 PF00881 Nitroreductase family CH621_06670 PF02348 Cytidylyltransferase CH621_06685 PF03237 Terminase-like family CH621_06685 PF06056 Putative ATPase subunit of terminase (gpP-like) CH621_06685 PF17289 CH621_06685 CH621_06690 PF05929 CH621_06690 CH621_06695 PF05125 CH621_06695 CH621_06700 PF05944 CH621_06700 CH621_06705 PF05926 CH621_06705 CH621_06710 PF05489 Phage Tail Protein X CH621_06715 PF16080 CH621_06715 CH621_06720 PF00959 Phage lysozyme CH621_06735 PF01258 Prokaryotic dksA/traR C4-type zinc finger CH621_06740 PF06891 CH621_06740 CH621_06745 PF05069 CH621_06745 CH621_06755 PF05069 CH621_06755 CH621_06765 PF05069 CH621_06765 CH621_06795 PF04717 Phage-related baseplate assembly protein CH621_06800 PF04965 Gene 25-like lysozyme CH621_06805 PF04865 CH621_06805 CH621_06810 PF09684 CH621_06810 CH621_06815 PF03406 CH621_06815 CH621_06815 PF07484 Phage Tail Collar Domain CH621_06815 PF12571 CH621_06815 CH621_06865 PF02576 Uncharacterised BCR, YhbC family COG0779 CH621_06865 PF17384 CH621_06865 CH621_06870 PF00575 S1 RNA binding domain CH621_06870 PF08529 NusA N-terminal domain CH621_06870 PF13184 NusA-like KH domain CH621_06870 PF14520 Helix-hairpin-helix domain CH621_06875 PF00009 Elongation factor Tu GTP binding domain CH621_06875 PF04760 Translation initiation factor IF-2, N-terminal region CH621_06875 PF08364 CH621_06875 CH621_06875 PF11987 Translation-initiation factor 2 CH621_06880 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CH621_06880 PF04851 Type III restriction enzyme, res subunit CH621_06880 PF11867 CH621_06880 CH621_06885 PF14355 CH621_06885 CH621_06890 PF01420 Type I restriction modification DNA specificity domain CH621_06895 PF02384 N-6 DNA Methylase CH621_06895 PF12161 HsdM N-terminal domain CH621_06900 PF02033 Ribosome-binding factor A CH621_06905 PF01509 TruB family pseudouridylate synthase (N terminal domain) CH621_06905 PF09157 Pseudouridine synthase II TruB, C-terminal CH621_06905 PF16198 CH621_06905 CH621_06910 PF01817 Chorismate mutase type II CH621_06910 PF02153 Prephenate dehydrogenase CH621_06915 PF14489 QueF-like protein CH621_06915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CH621_06920 PF10071 CH621_06920 CH621_06925 PF02657 Fe-S metabolism associated domain CH621_06930 PF00266 Aminotransferase class-V CH621_06935 PF00565 Staphylococcal nuclease homologue CH621_06940 PF03788 CH621_06940 CH621_06945 PF04172 CH621_06945 CH621_06950 PF01966 HD domain CH621_06950 PF13286 Phosphohydrolase-associated domain CH621_06955 PF00005 ABC transporter CH621_06955 PF12848 ABC transporter CH621_06955 PF16326 CH621_06955 CH621_06960 PF13416 Bacterial extracellular solute-binding protein CH621_06965 PF00528 Binding-protein-dependent transport system inner membrane component CH621_06970 PF00528 Binding-protein-dependent transport system inner membrane component CH621_06975 PF00005 ABC transporter CH621_06975 PF08402 TOBE domain CH621_06985 PF00210 Ferritin-like domain CH621_06990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH621_06990 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CH621_06995 PF08003 Protein of unknown function (DUF1698) CH621_07000 PF00474 Sodium:solute symporter family CH621_07005 PF00575 S1 RNA binding domain CH621_07005 PF10150 Ribonuclease E/G family CH621_07010 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH621_07010 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CH621_07015 PF03692 CH621_07015 CH621_07020 PF02446 4-alpha-glucanotransferase CH621_07025 PF00128 Alpha amylase, catalytic domain CH621_07025 PF02806 Alpha amylase, C-terminal all-beta domain CH621_07025 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH621_07030 PF00128 Alpha amylase, catalytic domain CH621_07030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH621_07035 PF00483 Nucleotidyl transferase CH621_07040 PF00534 Glycosyl transferases group 1 CH621_07040 PF08323 Starch synthase catalytic domain CH621_07045 PF00343 Carbohydrate phosphorylase CH621_07050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CH621_07050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CH621_07050 PF12769 Domain of unknown function (DUF3814) CH621_07055 PF02233 NAD(P) transhydrogenase beta subunit CH621_07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_07060 PF03466 LysR substrate binding domain CH621_07065 PF01131 DNA topoisomerase CH621_07065 PF01396 CH621_07065 CH621_07065 PF01751 Toprim domain CH621_07065 PF08272 Topoisomerase I zinc-ribbon-like CH621_07070 PF02525 Flavodoxin-like fold CH621_07075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH621_07075 PF02824 TGS domain CH621_07075 PF03129 Anticodon binding domain CH621_07075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH621_07080 PF00675 Insulinase (Peptidase family M16) CH621_07080 PF05193 Peptidase M16 inactive domain CH621_07090 PF03459 TOBE domain CH621_07095 PF04358 DsrC like protein CH621_07100 PF01171 PP-loop family CH621_07105 PF03882 KicB killing factor CH621_07105 PF17192 CH621_07105 CH621_07105 PF17193 CH621_07105 CH621_07110 PF00145 C-5 cytosine-specific DNA methylase CH621_07115 PF09554 CH621_07115 CH621_07120 PF04288 MukE-like family CH621_07125 PF04310 MukB N-terminal CH621_07125 PF13558 Putative exonuclease SbcCD, C subunit CH621_07125 PF16330 CH621_07125 CH621_07140 PF00929 Exonuclease CH621_07140 PF08411 Exonuclease C-terminal CH621_07145 PF00512 His Kinase A (phospho-acceptor) domain CH621_07145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH621_07150 PF00072 Response regulator receiver domain CH621_07150 PF00486 Transcriptional regulatory protein, C terminal CH621_07155 PF00005 ABC transporter CH621_07160 PF00528 Binding-protein-dependent transport system inner membrane component CH621_07165 PF00528 Binding-protein-dependent transport system inner membrane component CH621_07170 PF12849 PBP superfamily domain CH621_07175 PF00210 Ferritin-like domain CH621_07180 PF00210 Ferritin-like domain CH621_07185 PF00535 Glycosyl transferase family 2 CH621_07185 PF04886 CH621_07185 CH621_07190 PF00425 chorismate binding enzyme CH621_07190 PF04715 Anthranilate synthase component I, N terminal region CH621_07195 PF00117 Glutamine amidotransferase class-I CH621_07200 PF14552 Tautomerase enzyme CH621_07205 PF00591 Glycosyl transferase family, a/b domain CH621_07205 PF02885 Glycosyl transferase family, helical bundle domain CH621_07210 PF00218 Indole-3-glycerol phosphate synthase CH621_07210 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CH621_07215 PF01455 HupF/HypC family CH621_07220 PF00133 tRNA synthetases class I (I, L, M and V) CH621_07220 PF08264 Anticodon-binding domain of tRNA CH621_07220 PF10458 Valyl tRNA synthetase tRNA binding arm CH621_07230 PF04266 ASCH domain CH621_07245 PF04364 DNA polymerase III chi subunit, HolC CH621_07260 PF01501 Glycosyl transferase family 8 CH621_07265 PF00206 Lyase CH621_07265 PF10415 Fumarase C C-terminus CH621_07270 PF16036 CH621_07270 CH621_07275 PF02811 PHP domain CH621_07280 PF01180 Dihydroorotate dehydrogenase CH621_07285 PF09979 CH621_07285 CH621_07290 PF04233 CH621_07290 CH621_07295 PF06381 CH621_07295 CH621_07300 PF04466 Phage terminase large subunit CH621_07300 PF17288 CH621_07300 CH621_07305 PF03592 Terminase small subunit CH621_07310 PF01381 Helix-turn-helix CH621_07320 PF10828 CH621_07320 CH621_07325 PF00182 Chitinase class I CH621_07330 PF05106 CH621_07330 CH621_07335 PF02498 CH621_07335 CH621_07335 PF10548 CH621_07335 CH621_07340 PF10546 CH621_07340 CH621_07360 PF05772 NinB protein CH621_07370 PF06992 CH621_07370 CH621_07375 PF13730 CH621_07375 CH621_07380 PF03374 CH621_07380 CH621_07380 PF09669 CH621_07380 CH621_07390 PF15943 CH621_07390 CH621_07395 PF00717 Peptidase S24-like CH621_07395 PF01381 Helix-turn-helix CH621_07405 PF14213 CH621_07405 CH621_07415 PF07411 Domain of unknown function (DUF1508) CH621_07440 PF08346 CH621_07440 CH621_07445 PF00589 Phage integrase family CH621_07455 PF00027 Cyclic nucleotide-binding domain CH621_07455 PF13545 Crp-like helix-turn-helix domain CH621_07460 PF00582 Universal stress protein family CH621_07465 PF10670 CH621_07465 CH621_07470 PF00551 Formyl transferase CH621_07475 PF00586 AIR synthase related protein, N-terminal domain CH621_07475 PF02769 AIR synthase related protein, C-terminal domain CH621_07480 PF00106 short chain dehydrogenase CH621_07485 PF00291 Pyridoxal-phosphate dependent enzyme CH621_07490 PF00290 Tryptophan synthase alpha chain CH621_07495 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH621_07500 PF04073 Aminoacyl-tRNA editing domain CH621_07505 PF00313 'Cold-shock' DNA-binding domain CH621_07510 PF03701 CH621_07510 CH621_07515 PF00849 RNA pseudouridylate synthase CH621_07520 PF04287 tRNA pseudouridine synthase C CH621_07525 PF02568 Thiamine biosynthesis protein (ThiI) CH621_07525 PF02926 THUMP domain CH621_07530 PF02609 Exonuclease VII small subunit CH621_07535 PF00348 Polyprenyl synthetase CH621_07540 PF02779 Transketolase, pyrimidine binding domain CH621_07540 PF02780 Transketolase, C-terminal domain CH621_07540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CH621_07545 PF04386 Stringent starvation protein B CH621_07550 PF00043 Glutathione S-transferase, C-terminal domain CH621_07550 PF02798 Glutathione S-transferase, N-terminal domain CH621_07555 PF00380 Ribosomal protein S9/S16 CH621_07560 PF00572 Ribosomal protein L13 CH621_07565 PF02219 Methylenetetrahydrofolate reductase CH621_07570 PF13500 AAA domain CH621_07575 PF05166 YcgL domain CH621_07580 PF01227 GTP cyclohydrolase I CH621_07585 PF00994 Probable molybdopterin binding domain CH621_07585 PF03453 MoeA N-terminal region (domain I and II) CH621_07585 PF03454 MoeA C-terminal region (domain IV) CH621_07590 PF00899 ThiF family CH621_07595 PF04269 Protein of unknown function, DUF440 CH621_07600 PF00578 AhpC/TSA family CH621_07605 PF02683 CH621_07605 CH621_07610 PF01625 Peptide methionine sulfoxide reductase CH621_07610 PF01641 SelR domain CH621_07615 PF00892 EamA-like transporter family CH621_07620 PF13490 Putative zinc-finger CH621_07625 PF04542 Sigma-70 region 2 CH621_07625 PF08281 Sigma-70, region 4 CH621_07635 PF05658 Head domain of trimeric autotransporter adhesin CH621_07645 PF02321 Outer membrane efflux protein CH621_07650 PF02987 CH621_07650 CH621_07655 PF00300 Histidine phosphatase superfamily (branch 1) CH621_07660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH621_07660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH621_07660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH621_07660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH621_07665 PF00809 Pterin binding enzyme CH621_07670 PF00004 ATPase family associated with various cellular activities (AAA) CH621_07670 PF01434 Peptidase family M41 CH621_07670 PF06480 FtsH Extracellular CH621_07675 PF01728 FtsJ-like methyltransferase CH621_07680 PF01985 CRS1 / YhbY (CRM) domain CH621_07685 PF01272 Transcription elongation factor, GreA/GreB, C-term CH621_07685 PF03449 Transcription elongation factor, N-terminal CH621_07690 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CH621_07700 PF00312 Ribosomal protein S15 CH621_07715 PF07977 FabA-like domain CH621_07720 PF05362 Lon protease (S16) C-terminal proteolytic domain CH621_07720 PF13654 AAA domain CH621_07725 PF06303 Organiser of macrodomain of Terminus of chromosome CH621_07725 PF17414 CH621_07725 CH621_07730 PF13245 Part of AAA domain CH621_07730 PF13538 UvrD-like helicase C-terminal domain CH621_07735 PF00580 UvrD/REP helicase N-terminal domain CH621_07735 PF12705 PD-(D/E)XK nuclease superfamily CH621_07735 PF13361 UvrD-like helicase C-terminal domain CH621_07740 PF00453 Ribosomal protein L20 CH621_07745 PF01632 Ribosomal protein L35 CH621_07750 PF00707 Translation initiation factor IF-3, C-terminal domain CH621_07750 PF05198 Translation initiation factor IF-3, N-terminal domain CH621_07755 PF01263 Aldose 1-epimerase CH621_07760 PF16347 CH621_07760 CH621_07765 PF00004 ATPase family associated with various cellular activities (AAA) CH621_07770 PF04471 Restriction endonuclease CH621_07775 PF13672 Protein phosphatase 2C CH621_07780 PF02146 Sir2 family CH621_07785 PF09397 Ftsk gamma domain CH621_07790 PF02661 Fic/DOC family CH621_07790 PF13310 CH621_07790 CH621_07795 PF02146 Sir2 family CH621_07805 PF13280 CH621_07805 CH621_07810 PF00877 NlpC/P60 family CH621_07815 PF00216 Bacterial DNA-binding protein CH621_07820 PF01588 Putative tRNA binding domain CH621_07820 PF03147 Ferredoxin-fold anticodon binding domain CH621_07820 PF03483 B3/4 domain CH621_07820 PF03484 tRNA synthetase B5 domain CH621_07825 PF01409 tRNA synthetases class II core domain (F) CH621_07825 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CH621_07835 PF00111 2Fe-2S iron-sulfur cluster binding domain CH621_07840 PF01113 Dihydrodipicolinate reductase, N-terminus CH621_07840 PF05173 Dihydrodipicolinate reductase, C-terminus CH621_07845 PF01810 CH621_07845 CH621_07850 PF04608 Phosphatidylglycerophosphatase A CH621_07855 PF00586 AIR synthase related protein, N-terminal domain CH621_07855 PF02769 AIR synthase related protein, C-terminal domain CH621_07860 PF01029 NusB family CH621_07865 PF00885 6,7-dimethyl-8-ribityllumazine synthase CH621_07870 PF00152 tRNA synthetases class II (D, K and N) CH621_07870 PF01336 OB-fold nucleic acid binding domain CH621_07875 PF00484 Carbonic anhydrase CH621_07880 PF16326 CH621_07880 CH621_07885 PF12848 ABC transporter CH621_07890 PF00005 ABC transporter CH621_07895 PF14355 CH621_07895 CH621_07910 PF00294 pfkB family carbohydrate kinase CH621_07910 PF01467 Cytidylyltransferase CH621_07915 PF03279 CH621_07915 CH621_07920 PF00204 DNA gyrase B CH621_07920 PF00986 DNA gyrase B subunit, carboxyl terminus CH621_07920 PF01751 Toprim domain CH621_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH621_07925 PF00521 DNA gyrase/topoisomerase IV, subunit A CH621_07925 PF03989 DNA gyrase C-terminal domain, beta-propeller CH621_07930 PF03616 CH621_07930 CH621_07935 PF08443 RimK-like ATP-grasp domain CH621_07940 PF00462 Glutaredoxin CH621_07945 PF00109 Beta-ketoacyl synthase, N-terminal domain CH621_07945 PF02801 Beta-ketoacyl synthase, C-terminal domain CH621_07950 PF01266 FAD dependent oxidoreductase CH621_07950 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CH621_07960 PF01633 Choline/ethanolamine kinase CH621_07965 PF00892 EamA-like transporter family CH621_07970 PF12804 MobA-like NTP transferase domain CH621_07975 PF04991 CH621_07975 CH621_07980 PF01343 Peptidase family S49 CH621_07985 PF00881 Nitroreductase family CH621_07995 PF02525 Flavodoxin-like fold CH621_08000 PF00375 Sodium:dicarboxylate symporter family CH621_08005 PF00717 Peptidase S24-like CH621_08010 PF00793 DAHP synthetase I family CH621_08015 PF02687 CH621_08015 CH621_08015 PF12704 MacB-like periplasmic core domain CH621_08020 PF00005 ABC transporter CH621_08025 PF13500 AAA domain CH621_08030 PF08241 Methyltransferase domain CH621_08035 PF04301 CH621_08035 CH621_08040 PF00155 Aminotransferase class I and II CH621_08045 PF00202 Aminotransferase class-III CH621_08050 PF02687 CH621_08050 CH621_08050 PF12704 MacB-like periplasmic core domain CH621_08055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH621_08055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH621_08060 PF00793 DAHP synthetase I family CH621_08065 PF13369 CH621_08065 CH621_08065 PF13371 Tetratricopeptide repeat CH621_08070 PF13847 Methyltransferase domain CH621_08075 PF06271 CH621_08075 CH621_08080 PF00472 RF-1 domain CH621_08080 PF03462 PCRF domain CH621_08085 PF08238 Sel1 repeat CH621_08090 PF08238 Sel1 repeat CH621_08095 PF08238 Sel1 repeat CH621_08100 PF04315 CH621_08100 CH621_08110 PF06074 CH621_08110 CH621_08130 PF00224 Pyruvate kinase, barrel domain CH621_08130 PF02887 Pyruvate kinase, alpha/beta domain CH621_08135 PF00772 DnaB-like helicase N terminal domain CH621_08135 PF03796 DnaB-like helicase C terminal domain CH621_08140 PF00842 Alanine racemase, C-terminal domain CH621_08140 PF01168 Alanine racemase, N-terminal domain CH621_08145 PF00342 Phosphoglucose isomerase CH621_08155 PF00535 Glycosyl transferase family 2 CH621_08160 PF05433 CH621_08160 CH621_08170 PF06185 YecM protein CH621_08175 PF00750 tRNA synthetases class I (R) CH621_08175 PF03485 Arginyl tRNA synthetase N terminal domain CH621_08175 PF05746 DALR anticodon binding domain CH621_08180 PF10369 Small subunit of acetolactate synthase CH621_08180 PF13710 ACT domain CH621_08185 PF00205 Thiamine pyrophosphate enzyme, central domain CH621_08185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH621_08185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH621_08195 PF03553 CH621_08195 CH621_08200 PF00816 H-NS histone family CH621_08205 PF00551 Formyl transferase CH621_08205 PF01842 ACT domain CH621_08210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH621_08215 PF00004 ATPase family associated with various cellular activities (AAA) CH621_08215 PF12002 MgsA AAA+ ATPase C terminal CH621_08215 PF16193 CH621_08215 CH621_08220 PF03548 Outer membrane lipoprotein carrier protein LolA CH621_08225 PF01580 FtsK/SpoIIIE family CH621_08225 PF09397 Ftsk gamma domain CH621_08225 PF13491 CH621_08225 CH621_08230 PF01037 AsnC family CH621_08230 PF13412 Winged helix-turn-helix DNA-binding CH621_08235 PF13481 AAA domain CH621_08235 PF13541 Subunit ChlI of Mg-chelatase CH621_08240 PF01928 CYTH domain CH621_08245 PF05860 haemagglutination activity domain CH621_08245 PF13018 CH621_08245 CH621_08250 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH621_08270 PF13683 CH621_08270 CH621_08275 PF13384 Homeodomain-like domain CH621_08285 PF08765 Mor transcription activator family CH621_08290 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) CH621_08295 PF05114 Protein of unknown function (DUF692) CH621_08305 PF07681 CH621_08305 CH621_08310 PF01865 Protein of unknown function DUF47 CH621_08315 PF01384 CH621_08315 CH621_08320 PF08239 Bacterial SH3 domain CH621_08325 PF01743 Poly A polymerase head domain CH621_08325 PF01966 HD domain CH621_08325 PF12627 Probable RNA and SrmB- binding site of polymerase A CH621_08330 PF03550 Outer membrane lipoprotein LolB CH621_08335 PF00288 GHMP kinases N terminal domain CH621_08335 PF08544 GHMP kinases C terminal CH621_08340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CH621_08340 PF14572 Phosphoribosyl synthetase-associated domain CH621_08345 PF00579 tRNA synthetases class I (W and Y) CH621_08345 PF01479 S4 domain CH621_08350 PF03749 Sugar fermentation stimulation protein CH621_08355 PF01554 MatE CH621_08360 PF00677 Lumazine binding domain CH621_08365 PF01433 Peptidase family M1 CH621_08365 PF11940 Domain of unknown function (DUF3458) CH621_08365 PF17432 CH621_08365 CH621_08370 PF05534 CH621_08370 CH621_08375 PF07927 YcfA-like protein CH621_08380 PF00731 AIR carboxylase CH621_08385 PF02222 ATP-grasp domain CH621_08390 PF00155 Aminotransferase class I and II CH621_08395 PF00005 ABC transporter CH621_08400 PF02361 Cobalt transport protein CH621_08405 PF01891 Cobalt uptake substrate-specific transmembrane region CH621_08415 PF10670 CH621_08415 CH621_08420 PF13411 MerR HTH family regulatory protein CH621_08425 PF08238 Sel1 repeat CH621_08430 PF14256 CH621_08430 CH621_08435 PF01042 Endoribonuclease L-PSP CH621_08440 PF06295 CH621_08440 CH621_08450 PF01386 Ribosomal L25p family CH621_08480 PF00709 Adenylosuccinate synthetase CH621_08485 PF00132 Bacterial transferase hexapeptide (six repeats) CH621_08485 PF14602 Hexapeptide repeat of succinyl-transferase CH621_08485 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CH621_08490 PF00356 Bacterial regulatory proteins, lacI family CH621_08490 PF13377 Periplasmic binding protein-like domain CH621_08495 PF00311 Phosphoenolpyruvate carboxylase CH621_08500 PF04317 CH621_08500 CH621_08505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH621_08510 PF00528 Binding-protein-dependent transport system inner membrane component CH621_08515 PF00528 Binding-protein-dependent transport system inner membrane component CH621_08515 PF12911 CH621_08515 CH621_08520 PF00005 ABC transporter CH621_08520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH621_08525 PF00005 ABC transporter CH621_08530 PF03601 CH621_08530 CH621_08535 PF01416 tRNA pseudouridine synthase CH621_08540 PF00316 Fructose-1-6-bisphosphatase CH621_08550 PF02652 CH621_08550 CH621_08555 PF00593 TonB dependent receptor CH621_08555 PF07715 TonB-dependent Receptor Plug Domain CH621_08560 PF01048 Phosphorylase superfamily CH621_08565 PF01323 DSBA-like thioredoxin domain CH621_08570 PF01368 DHH family CH621_08570 PF02272 DHHA1 domain CH621_08575 PF10411 Disulfide bond isomerase protein N-terminus CH621_08575 PF13098 Thioredoxin-like domain CH621_08585 PF00152 tRNA synthetases class II (D, K and N) CH621_08585 PF01336 OB-fold nucleic acid binding domain CH621_08590 PF00056 lactate/malate dehydrogenase, NAD binding domain CH621_08590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CH621_08595 PF01316 Arginine repressor, DNA binding domain CH621_08595 PF02863 Arginine repressor, C-terminal domain CH621_08600 PF01370 NAD dependent epimerase/dehydratase family CH621_08600 PF08338 Domain of unknown function (DUF1731) CH621_08605 PF00156 Phosphoribosyl transferase domain CH621_08605 PF13522 Glutamine amidotransferase domain CH621_08610 PF02674 CH621_08610 CH621_08615 PF04217 CH621_08615 CH621_08620 PF00871 Acetokinase family CH621_08625 PF01515 Phosphate acetyl/butaryl transferase CH621_08625 PF07085 DRTGG domain CH621_08625 PF13500 AAA domain CH621_08630 PF01713 Smr domain CH621_08635 PF05175 Methyltransferase small domain CH621_08640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_08640 PF03466 LysR substrate binding domain CH621_08645 PF00849 RNA pseudouridylate synthase CH621_08645 PF01479 S4 domain CH621_08650 PF01300 Telomere recombination CH621_08655 PF00549 CoA-ligase CH621_08655 PF02629 CoA binding domain CH621_08660 PF00549 CoA-ligase CH621_08660 PF08442 ATP-grasp domain CH621_08665 PF01728 FtsJ-like methyltransferase CH621_08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH621_08670 PF03466 LysR substrate binding domain CH621_08675 PF01063 Aminotransferase class IV CH621_08685 PF06508 Queuosine biosynthesis protein QueC CH621_08690 PF01242 6-pyruvoyl tetrahydropterin synthase CH621_08695 PF04055 Radical SAM superfamily CH621_08695 PF13394 4Fe-4S single cluster domain CH621_08705 PF00580 UvrD/REP helicase N-terminal domain CH621_08705 PF13361 UvrD-like helicase C-terminal domain CH621_08710 PF00528 Binding-protein-dependent transport system inner membrane component CH621_08715 PF00528 Binding-protein-dependent transport system inner membrane component CH621_08715 PF12911 CH621_08715 CH621_08720 PF00005 ABC transporter CH621_08720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH621_08725 PF00005 ABC transporter CH621_08725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH621_08730 PF01068 ATP dependent DNA ligase domain CH621_08730 PF14743 DNA ligase OB-like domain CH621_08735 PF13580 SIS domain CH621_08740 PF00005 ABC transporter CH621_08745 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH621_08750 PF00528 Binding-protein-dependent transport system inner membrane component CH621_08755 PF00528 Binding-protein-dependent transport system inner membrane component CH621_08765 PF02462 Opacity family porin protein CH621_08770 PF10263 CH621_08770 CH621_08770 PF17283 CH621_08770 CH621_08775 PF00438 S-adenosylmethionine synthetase, N-terminal domain CH621_08775 PF02772 S-adenosylmethionine synthetase, central domain CH621_08775 PF02773 S-adenosylmethionine synthetase, C-terminal domain CH621_08780 PF00117 Glutamine amidotransferase class-I CH621_08785 PF00425 chorismate binding enzyme CH621_08790 PF01063 Aminotransferase class IV CH621_08795 PF04363 CH621_08795 CH621_08800 PF00266 Aminotransferase class-V CH621_08805 PF00155 Aminotransferase class I and II CH621_08810 PF00462 Glutaredoxin CH621_08815 PF00691 OmpA family CH621_08815 PF01389 OmpA-like transmembrane domain CH621_08820 PF01565 FAD binding domain CH621_08820 PF02913 FAD linked oxidases, C-terminal domain CH621_08820 PF13183 4Fe-4S dicluster domain CH621_08825 PF03061 Thioesterase superfamily CH621_08830 PF00762 Ferrochelatase CH621_08835 PF00085 Thioredoxin CH621_08835 PF14559 Tetratricopeptide repeat CH621_08835 PF14561 Tetratricopeptide repeat CH621_08840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH621_08845 PF00005 ABC transporter CH621_08845 PF00664 ABC transporter transmembrane region CH621_08850 PF00005 ABC transporter CH621_08850 PF00664 ABC transporter transmembrane region CH621_08860 PF13353 4Fe-4S single cluster domain CH621_08865 PF00375 Sodium:dicarboxylate symporter family CH621_08875 PF00156 Phosphoribosyl transferase domain CH621_08880 PF01523 Putative modulator of DNA gyrase CH621_08885 PF04751 Protein of unknown function (DUF615) CH621_08890 PF06835 Lipopolysaccharide-assembly, LptC-related CH621_08895 PF03968 OstA-like protein CH621_08900 PF00005 ABC transporter CH621_08900 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH621_08905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH621_08910 PF03668 CH621_08910 CH621_08915 PF00800 Prephenate dehydratase CH621_08915 PF01817 Chorismate mutase type II CH621_08920 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CH621_08925 PF00091 Tubulin/FtsZ family, GTPase domain CH621_08925 PF12327 FtsZ family, C-terminal domain CH621_08930 PF02491 SHS2 domain inserted in FTSA CH621_08930 PF14450 Cell division protein FtsA CH621_08935 PF03799 Cell division protein FtsQ CH621_08935 PF08478 POTRA domain, FtsQ-type CH621_08940 PF01820 D-ala D-ala ligase N-terminus CH621_08940 PF07478 D-ala D-ala ligase C-terminus CH621_08945 PF01225 Mur ligase family, catalytic domain CH621_08945 PF02875 Mur ligase family, glutamate ligase domain CH621_08945 PF08245 Mur ligase middle domain CH621_08950 PF03033 Glycosyltransferase family 28 N-terminal domain CH621_08950 PF04101 Glycosyltransferase family 28 C-terminal domain CH621_08955 PF01098 CH621_08955 CH621_08960 PF02875 Mur ligase family, glutamate ligase domain CH621_08960 PF08245 Mur ligase middle domain CH621_08965 PF00953 Glycosyl transferase family 4 CH621_08965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CH621_08970 PF01225 Mur ligase family, catalytic domain CH621_08970 PF02875 Mur ligase family, glutamate ligase domain CH621_08970 PF08245 Mur ligase middle domain CH621_08975 PF01225 Mur ligase family, catalytic domain CH621_08975 PF02875 Mur ligase family, glutamate ligase domain CH621_08975 PF08245 Mur ligase middle domain CH621_08980 PF00905 Penicillin binding protein transpeptidase domain CH621_08980 PF03717 Penicillin-binding Protein dimerisation domain CH621_08985 PF04999 CH621_08985 CH621_08990 PF01795 MraW methylase family CH621_08995 PF02381 MraZ protein CH621_09000 PF02554 CH621_09000 CH621_09000 PF13722 CH621_09000 CH621_09005 PF10571 CH621_09005 CH621_09010 PF00923 Transaldolase CH621_09015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH621_09020 PF00528 Binding-protein-dependent transport system inner membrane component CH621_09025 PF00528 Binding-protein-dependent transport system inner membrane component CH621_09025 PF12911 CH621_09025 CH621_09030 PF00005 ABC transporter CH621_09030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH621_09035 PF00005 ABC transporter CH621_09035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH621_09040 PF04393 CH621_09040 CH621_09045 PF01926 50S ribosome-binding GTPase CH621_09050 PF01078 Magnesium chelatase, subunit ChlI CH621_09050 PF13335 CH621_09050 CH621_09050 PF13541 Subunit ChlI of Mg-chelatase CH621_09055 PF01791 DeoC/LacD family aldolase CH621_09060 PF00578 AhpC/TSA family CH621_09065 PF01370 NAD dependent epimerase/dehydratase family CH621_09070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH621_09070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH621_09080 PF00155 Aminotransferase class I and II CH621_09085 PF03553 CH621_09085 CH621_09090 PF12833 Helix-turn-helix domain CH621_09090 PF13377 Periplasmic binding protein-like domain CH621_09095 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH621_09100 PF07690 Major Facilitator Superfamily CH621_09105 PF00291 Pyridoxal-phosphate dependent enzyme CH621_09110 PF07264 Etoposide-induced protein 2 CH621_09115 PF04354 ZipA, C-terminal FtsZ-binding domain CH621_09120 PF00533 BRCA1 C Terminus (BRCT) domain CH621_09120 PF01653 NAD-dependent DNA ligase adenylation domain CH621_09120 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CH621_09120 PF03120 NAD-dependent DNA ligase OB-fold domain CH621_09120 PF12826 Helix-hairpin-helix motif CH621_09120 PF14520 Helix-hairpin-helix domain CH621_09140 PF03918 Cytochrome C biogenesis protein CH621_09145 PF08534 Redoxin CH621_09150 PF01578 CH621_09150 CH621_09150 PF16327 CH621_09150 CH621_09155 PF03100 CcmE CH621_09160 PF04995 CH621_09160 CH621_09165 PF01578 CH621_09165 CH621_09170 PF03379 CH621_09170 CH621_09175 PF00005 ABC transporter CH621_09180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH621_09180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH621_09185 PF00005 ABC transporter CH621_09190 PF02405 CH621_09190 CH621_09195 PF02470 CH621_09195 CH621_09200 PF05494 Toluene tolerance, Ttg2 CH621_09205 PF13466 STAS domain CH621_09210 PF01722 BolA-like protein CH621_09215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH621_09220 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH621_09225 PF00528 Binding-protein-dependent transport system inner membrane component CH621_09230 PF00005 ABC transporter CH621_09235 PF04973 CH621_09235 CH621_09240 PF00117 Glutamine amidotransferase class-I CH621_09240 PF06418 CTP synthase N-terminus CH621_09250 PF01654 CH621_09250 CH621_09255 PF02322 CH621_09255 CH621_09260 PF04284 CH621_09260 CH621_09265 PF04241 CH621_09265 CH621_09270 PF00270 DEAD/DEAH box helicase CH621_09270 PF00271 Helicase conserved C-terminal domain CH621_09270 PF04408 Helicase associated domain (HA2) CH621_09270 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CH621_09270 PF11898 CH621_09270 CH621_09275 PF02335 Cytochrome c552 CH621_09285 PF13247 4Fe-4S dicluster domain CH621_09290 PF03916 CH621_09290 CH621_09295 PF00696 Amino acid kinase family CH621_09300 PF00884 Sulfatase CH621_09305 PF07977 FabA-like domain CH621_09310 PF00132 Bacterial transferase hexapeptide (six repeats) CH621_09310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CH621_09315 PF02684 CH621_09315 CH621_09320 PF01351 Ribonuclease HII CH621_09330 PF01555 DNA methylase CH621_09330 PF12564 CH621_09330 CH621_09335 PF04851 Type III restriction enzyme, res subunit CH621_09340 PF02627 Carboxymuconolactone decarboxylase family CH621_09345 PF12833 Helix-turn-helix domain CH621_09345 PF12852 Cupin CH621_09350 PF00005 ABC transporter CH621_09350 PF00664 ABC transporter transmembrane region CH621_09355 PF00403 Heavy-metal-associated domain CH621_09365 PF01841 Transglutaminase-like superfamily CH621_09370 PF00384 Molybdopterin oxidoreductase CH621_09370 PF01568 Molydopterin dinucleotide binding domain CH621_09370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH621_09375 PF12800 4Fe-4S binding domain CH621_09375 PF13247 4Fe-4S dicluster domain CH621_09380 PF04976 CH621_09380 CH621_09385 PF02613 Nitrate reductase delta subunit CH621_09390 PF00037 4Fe-4S binding domain CH621_09390 PF12838 4Fe-4S dicluster domain CH621_09395 PF02607 B12 binding domain CH621_09400 PF02310 B12 binding domain CH621_09400 PF02965 Vitamin B12 dependent methionine synthase, activation domain CH621_09405 PF07693 CH621_09405 CH621_09410 PF13173 AAA domain CH621_09410 PF13635 CH621_09410 CH621_09415 PF13230 Glutamine amidotransferases class-II CH621_09420 PF02325 CH621_09420 CH621_09425 PF01544 CorA-like Mg2+ transporter protein CH621_09430 PF04461 Protein of unknown function (DUF520) CH621_09435 PF12710 haloacid dehalogenase-like hydrolase CH621_09440 PF01614 Bacterial transcriptional regulator CH621_09440 PF09339 IclR helix-turn-helix domain CH621_09445 PF02615 Malate/L-lactate dehydrogenase CH621_09450 PF04290 CH621_09450 CH621_09455 PF06808 CH621_09455 CH621_09460 PF03480 Bacterial extracellular solute-binding protein, family 7 CH621_09465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH621_09465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH621_09470 PF01261 Xylose isomerase-like TIM barrel CH621_09475 PF00596 Class II Aldolase and Adducin N-terminal domain CH621_09480 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CH621_09485 PF00456 Transketolase, thiamine diphosphate binding domain CH621_09485 PF02779 Transketolase, pyrimidine binding domain CH621_09485 PF02780 Transketolase, C-terminal domain CH621_09490 PF04055 Radical SAM superfamily CH621_09490 PF06968 Biotin and Thiamin Synthesis associated domain CH621_09495 PF00005 ABC transporter CH621_09500 PF00528 Binding-protein-dependent transport system inner membrane component CH621_09505 PF13343 Bacterial extracellular solute-binding protein CH621_09510 PF12836 Helix-hairpin-helix motif CH621_09515 PF02401 LytB protein CH621_09520 PF01252 CH621_09520 CH621_09525 PF00884 Sulfatase CH621_09530 PF13145 PPIC-type PPIASE domain CH621_09530 PF13624 SurA N-terminal domain CH621_09535 PF01926 50S ribosome-binding GTPase CH621_09535 PF10396 GTP-binding protein TrmE N-terminus CH621_09535 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CH621_09540 PF02096 60Kd inner membrane protein CH621_09540 PF14849 YidC periplasmic domain CH621_09545 PF01809 CH621_09545 CH621_09550 PF00825 Ribonuclease P CH621_09555 PF00468 Ribosomal protein L34 CH621_09560 PF04575 CH621_09560 CH621_09565 PF01298 Transferrin binding protein-like solute binding protein CH621_09565 PF17483 CH621_09565 CH621_09565 PF17484 CH621_09565 CH621_09570 PF00593 TonB dependent receptor CH621_09570 PF07715 TonB-dependent Receptor Plug Domain