HCD_00005 IPR006027 NusB/RsmB/TIM44 HCD_00005 IPR011605 NusB antitermination factor HCD_00005 IPR035926 HCD_00005 HCD_00010 IPR002180 6,7-dimethyl-8-ribityllumazine synthase HCD_00010 IPR034964 HCD_00010 HCD_00010 IPR036467 HCD_00010 HCD_00015 IPR006218 DAHP synthetase I/KDSA HCD_00015 IPR006269 3-deoxy-8-phosphooctulonate synthase HCD_00015 IPR013785 Aldolase-type TIM barrel HCD_00020 IPR001765 Carbonic anhydrase HCD_00020 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site HCD_00020 IPR036874 HCD_00020 HCD_00025 IPR001754 Orotidine 5'-phosphate decarboxylase domain HCD_00025 IPR011060 Ribulose-phosphate binding barrel HCD_00025 IPR013785 Aldolase-type TIM barrel HCD_00025 IPR014732 Orotidine 5'-phosphate decarboxylase HCD_00025 IPR018089 Orotidine 5'-phosphate decarboxylase, active site HCD_00030 IPR003721 Pantoate-beta-alanine ligase HCD_00030 IPR004821 Cytidyltransferase-like domain HCD_00030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_00035 IPR001844 Chaperonin Cpn60 HCD_00035 IPR002423 Chaperonin Cpn60/TCP-1 HCD_00035 IPR018370 Chaperonin Cpn60, conserved site HCD_00035 IPR027409 GroEL-like apical domain HCD_00035 IPR027410 TCP-1-like chaperonin intermediate domain HCD_00035 IPR027413 GroEL-like equatorial domain HCD_00040 IPR011032 GroES (chaperonin 10)-like HCD_00040 IPR018369 Chaperonin Cpn10, conserved site HCD_00040 IPR020818 Chaperonin Cpn10 HCD_00040 IPR037124 HCD_00040 HCD_00045 IPR002718 Outer membrane protein, Helicobacter HCD_00050 IPR002718 Outer membrane protein, Helicobacter HCD_00055 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain HCD_00055 IPR028614 GDP-L-fucose synthase HCD_00055 IPR036291 HCD_00055 HCD_00060 IPR006368 GDP-mannose 4,6-dehydratase HCD_00060 IPR016040 NAD(P)-binding domain HCD_00060 IPR036291 HCD_00060 HCD_00075 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI HCD_00080 IPR010258 Conjugal transfer, TrbG/VirB9/CagX HCD_00080 IPR038161 HCD_00080 HCD_00085 IPR007430 Bacterial virulence protein VirB8 HCD_00085 IPR032710 HCD_00085 HCD_00095 IPR007688 Conjugal transfer, TrbL/VirB6 HCD_00100 IPR001478 PDZ domain HCD_00100 IPR036034 HCD_00100 HCD_00105 IPR004401 Nucleoid-associated protein YbaB HCD_00105 IPR036894 HCD_00105 HCD_00110 IPR003190 Aspartate decarboxylase HCD_00110 IPR009010 Aspartate decarboxylase-like domain HCD_00115 IPR001270 ClpA/B family HCD_00115 IPR003593 AAA+ ATPase domain HCD_00115 IPR003959 ATPase, AAA-type, core HCD_00115 IPR004176 Clp, N-terminal HCD_00115 IPR018368 ClpA/B, conserved site 1 HCD_00115 IPR019489 Clp ATPase, C-terminal HCD_00115 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_00115 IPR036628 HCD_00115 HCD_00120 IPR003769 Adaptor protein ClpS, core HCD_00120 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like HCD_00120 IPR022935 ATP-dependent Clp protease adaptor protein ClpS HCD_00125 IPR006016 UspA HCD_00125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_00130 IPR004472 Dethiobiotin synthase BioD HCD_00130 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_00135 IPR011088 Bacteriophage phiNM3, A0EWY4 HCD_00140 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic HCD_00140 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site HCD_00140 IPR024084 Isopropylmalate dehydrogenase-like domain HCD_00145 IPR002020 Citrate synthase-like HCD_00145 IPR016142 Citrate synthase-like, large alpha subdomain HCD_00145 IPR016143 Citrate synthase-like, small alpha subdomain HCD_00145 IPR019810 Citrate synthase active site HCD_00145 IPR024176 Citrate synthase, bacterial-type HCD_00145 IPR036969 HCD_00145 HCD_00150 IPR002718 Outer membrane protein, Helicobacter HCD_00155 IPR000917 Sulfatase HCD_00155 IPR012549 Domain of unknown function DUF1705 HCD_00155 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha HCD_00155 IPR017850 Alkaline-phosphatase-like, core domain HCD_00160 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HCD_00160 IPR036938 HCD_00160 HCD_00165 IPR005730 Carboxynorspermidine decarboxylase HCD_00165 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal HCD_00165 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal HCD_00165 IPR029066 PLP-binding barrel HCD_00170 IPR001789 Signal transduction response regulator, receiver domain HCD_00170 IPR002545 CheW-like protein HCD_00170 IPR011006 CheY-like superfamily HCD_00170 IPR024181 Chemotaxis response regulator CheV HCD_00170 IPR036061 HCD_00170 HCD_00180 IPR002543 FtsK domain HCD_00180 IPR004346 CagE, TrbE, VirB component of type IV transporter system HCD_00180 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain HCD_00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_00190 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 HCD_00200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_00205 IPR002694 Zinc finger, CHC2-type HCD_00205 IPR006171 Toprim domain HCD_00205 IPR006295 DNA primase, DnaG HCD_00205 IPR013264 DNA primase, catalytic core, N-terminal HCD_00205 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal HCD_00205 IPR030846 HCD_00205 HCD_00205 IPR031988 HCD_00205 HCD_00205 IPR036977 HCD_00205 HCD_00205 IPR037068 HCD_00205 HCD_00210 IPR021907 Protein of unknown function DUF3519 HCD_00225 IPR001207 Transposase, mutator type HCD_00230 IPR001207 Transposase, mutator type HCD_00255 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 HCD_00255 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal HCD_00255 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HCD_00255 IPR016039 Thiolase-like HCD_00260 IPR003664 Fatty acid synthesis PlsX protein HCD_00260 IPR012281 Phospholipid biosynthesis protein, PlsX-like HCD_00265 IPR002677 Ribosomal protein L32p HCD_00265 IPR011332 Zinc-binding ribosomal protein HCD_00275 IPR001564 Nucleoside diphosphate kinase HCD_00275 IPR023005 Nucleoside diphosphate kinase, active site HCD_00275 IPR034907 HCD_00275 HCD_00275 IPR036850 HCD_00275 HCD_00280 IPR002133 S-adenosylmethionine synthetase HCD_00280 IPR022628 S-adenosylmethionine synthetase, N-terminal HCD_00280 IPR022629 S-adenosylmethionine synthetase, central domain HCD_00280 IPR022630 S-adenosylmethionine synthetase, C-terminal HCD_00280 IPR022631 S-adenosylmethionine synthetase, conserved site HCD_00280 IPR022636 S-adenosylmethionine synthetase superfamily HCD_00285 IPR001451 Bacterial transferase hexapeptide repeat HCD_00285 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase HCD_00285 IPR011004 Trimeric LpxA-like HCD_00285 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region HCD_00290 IPR002347 Glucose/ribitol dehydrogenase HCD_00290 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) HCD_00290 IPR036291 HCD_00290 HCD_00295 IPR000652 Triosephosphate isomerase HCD_00295 IPR013785 Aldolase-type TIM barrel HCD_00295 IPR020861 Triosephosphate isomerase, active site HCD_00295 IPR035990 HCD_00295 HCD_00300 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit HCD_00300 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit HCD_00300 IPR034804 HCD_00300 HCD_00305 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site HCD_00305 IPR003953 FAD binding domain HCD_00305 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal HCD_00305 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain HCD_00305 IPR036188 HCD_00305 HCD_00305 IPR037099 HCD_00305 HCD_00310 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein HCD_00310 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site HCD_00310 IPR009051 Alpha-helical ferredoxin HCD_00310 IPR012675 Beta-grasp domain HCD_00310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_00310 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_00310 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal HCD_00310 IPR036010 HCD_00310 HCD_00315 IPR001736 Phospholipase D/Transphosphatidylase HCD_00315 IPR025202 Phospholipase D-like domain HCD_00320 IPR002718 Outer membrane protein, Helicobacter HCD_00325 IPR002718 Outer membrane protein, Helicobacter HCD_00330 IPR001648 Ribosomal protein S18 HCD_00330 IPR018275 Ribosomal protein S18, conserved site HCD_00330 IPR036870 HCD_00330 HCD_00335 IPR000424 Primosome PriB/single-strand DNA-binding HCD_00335 IPR011344 Single-stranded DNA-binding protein HCD_00335 IPR012340 Nucleic acid-binding, OB-fold HCD_00340 IPR000529 Ribosomal protein S6 HCD_00340 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 HCD_00340 IPR020814 Ribosomal protein S6, plastid/chloroplast HCD_00340 IPR020815 Ribosomal protein S6, conserved site HCD_00340 IPR035980 HCD_00340 HCD_00345 IPR010372 DNA polymerase III, delta HCD_00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_00350 IPR001900 HCD_00350 HCD_00350 IPR012340 Nucleic acid-binding, OB-fold HCD_00350 IPR022966 Ribonuclease II/R, conserved site HCD_00355 IPR011342 Shikimate dehydrogenase HCD_00355 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal HCD_00355 IPR022893 Shikimate, quinate/shikimate dehydrogenase HCD_00355 IPR036291 HCD_00355 HCD_00360 IPR003646 SH3-like domain, bacterial-type HCD_00365 IPR000515 MetI-like domain HCD_00365 IPR035906 HCD_00365 HCD_00370 IPR000914 Bacterial extracellular solute-binding protein, family 5 HCD_00370 IPR030678 HCD_00370 HCD_00375 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_00375 IPR002305 Aminoacyl-tRNA synthetase, class Ic HCD_00375 IPR002306 Tryptophan-tRNA ligase HCD_00375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_00375 IPR024109 Tryptophan-tRNA ligase, bacterial-type HCD_00380 IPR025714 Methyltransferase domain HCD_00380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_00385 IPR004692 Preprotein translocase SecG subunit HCD_00390 IPR002661 Ribosome recycling factor HCD_00390 IPR023584 Ribosome recycling factor domain HCD_00390 IPR036191 HCD_00390 HCD_00395 IPR000836 Phosphoribosyltransferase domain HCD_00395 IPR006273 Orotate phosphoribosyltransferase, bacterial HCD_00395 IPR023031 Orotate phosphoribosyltransferase HCD_00395 IPR029057 Phosphoribosyltransferase-like HCD_00400 IPR010432 RDD HCD_00405 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 HCD_00405 IPR038430 HCD_00405 HCD_00410 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit HCD_00410 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit HCD_00415 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit HCD_00415 IPR010218 NADH dehydrogenase, subunit C HCD_00415 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site HCD_00415 IPR037232 HCD_00415 HCD_00420 IPR001135 NADH-quinone oxidoreductase, subunit D HCD_00420 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H HCD_00420 IPR029014 NiFe hydrogenase-like HCD_00420 IPR038290 HCD_00420 HCD_00425 IPR032424 HCD_00425 HCD_00425 IPR036868 HCD_00425 HCD_00435 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain HCD_00435 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_00435 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding HCD_00435 IPR036010 HCD_00435 HCD_00440 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H HCD_00440 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site HCD_00445 IPR009051 Alpha-helical ferredoxin HCD_00445 IPR010226 NADH-quinone oxidoreductase, chain I HCD_00445 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_00445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_00450 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 HCD_00455 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K HCD_00455 IPR039428 HCD_00455 HCD_00460 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal HCD_00460 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase HCD_00460 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 HCD_00460 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup HCD_00465 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase HCD_00465 IPR003918 NADH:ubiquinone oxidoreductase HCD_00465 IPR010227 NADH-quinone oxidoreductase, chain M/4 HCD_00470 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase HCD_00470 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 HCD_00475 IPR011990 Tetratricopeptide-like helical domain HCD_00475 IPR018704 Domain of unknown function DUF09976 HCD_00475 IPR019734 Tetratricopeptide repeat HCD_00480 IPR005841 Alpha-D-phosphohexomutase superfamily HCD_00480 IPR005843 Alpha-D-phosphohexomutase, C-terminal HCD_00480 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I HCD_00480 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II HCD_00480 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III HCD_00480 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III HCD_00480 IPR016066 Alpha-D-phosphohexomutase, conserved site HCD_00480 IPR036900 HCD_00480 HCD_00485 IPR025272 Domain of unknown function DUF4065 HCD_00495 IPR006282 Thiamin pyrophosphokinase HCD_00495 IPR007371 Thiamin pyrophosphokinase, catalytic domain HCD_00495 IPR036759 HCD_00495 HCD_00500 IPR006419 Nicotinamide mononucleotide transporter PnuC HCD_00505 IPR004305 Thiaminase-2/PQQC HCD_00505 IPR016084 Haem oxygenase-like, multi-helical HCD_00505 IPR027574 Thiaminase II HCD_00515 IPR005519 Acid phosphatase (Class B) HCD_00515 IPR006423 5-nucleotidase lipoprotein e(P4) HCD_00515 IPR023214 HAD-like domain HCD_00515 IPR036412 HCD_00515 HCD_00520 IPR002201 Glycosyl transferase, family 9 HCD_00525 IPR035235 HCD_00525 HCD_00530 IPR001525 C-5 cytosine methyltransferase HCD_00530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_00535 IPR001525 C-5 cytosine methyltransferase HCD_00535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_00540 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial HCD_00540 IPR005801 ADC synthase HCD_00540 IPR006805 Anthranilate synthase component I, N-terminal HCD_00540 IPR015890 Chorismate binding, C-terminal HCD_00540 IPR019999 Anthranilate synthase component I - like HCD_00545 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain HCD_00545 IPR017926 Glutamine amidotransferase HCD_00545 IPR029062 Class I glutamine amidotransferase-like HCD_00550 IPR000312 Glycosyl transferase, family 3 HCD_00550 IPR005940 Anthranilate phosphoribosyl transferase HCD_00550 IPR017459 Glycosyl transferase family 3, N-terminal domain HCD_00550 IPR035902 HCD_00550 HCD_00550 IPR036320 HCD_00550 HCD_00555 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain HCD_00555 IPR001468 Indole-3-glycerol phosphate synthase, conserved site HCD_00555 IPR011060 Ribulose-phosphate binding barrel HCD_00555 IPR013785 Aldolase-type TIM barrel HCD_00555 IPR013798 Indole-3-glycerol phosphate synthase HCD_00560 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HCD_00560 IPR006653 Tryptophan synthase, beta chain, conserved site HCD_00560 IPR006654 Tryptophan synthase, beta chain HCD_00560 IPR023026 Tryptophan synthase beta chain/beta chain-like HCD_00560 IPR036052 HCD_00560 HCD_00565 IPR002028 Tryptophan synthase, alpha chain HCD_00565 IPR011060 Ribulose-phosphate binding barrel HCD_00565 IPR013785 Aldolase-type TIM barrel HCD_00595 IPR011089 Domain of unknown function DUF1524 HCD_00605 IPR006597 Sel1-like HCD_00605 IPR011990 Tetratricopeptide-like helical domain HCD_00610 IPR011990 Tetratricopeptide-like helical domain HCD_00620 IPR000612 Proteolipid membrane potential modulator HCD_00630 IPR029470 PD-(D/E)XK nuclease superfamily HCD_00645 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 HCD_00645 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF HCD_00650 IPR004394 Protein Iojap/ribosomal silencing factor RsfS HCD_00655 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase HCD_00660 IPR025272 Domain of unknown function DUF4065 HCD_00670 IPR002495 Glycosyl transferase, family 8 HCD_00670 IPR029044 Nucleotide-diphospho-sugar transferases HCD_00675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_00675 IPR025247 Adenine-specific methylase EcoRI HCD_00680 IPR004221 Restriction endonuclease, type II, EcoRI HCD_00680 IPR011335 Restriction endonuclease type II-like HCD_00680 IPR011336 Restriction endonuclease, type II, EcoRI/MunI HCD_00685 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase HCD_00685 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal HCD_00685 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 HCD_00685 IPR036318 HCD_00685 HCD_00685 IPR036635 HCD_00685 HCD_00690 IPR002191 Bacterial export protein family 3 HCD_00690 IPR006305 Flagellar biosynthesis protein FliQ HCD_00695 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain HCD_00695 IPR003593 AAA+ ATPase domain HCD_00695 IPR005714 ATPase, type III secretion system, FliI/YscN HCD_00695 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site HCD_00695 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_00700 IPR001482 Type II secretion system protein E HCD_00700 IPR003593 AAA+ ATPase domain HCD_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_00705 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_00705 IPR002300 Aminoacyl-tRNA synthetase, class Ia HCD_00705 IPR002301 Isoleucine-tRNA ligase HCD_00705 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain HCD_00705 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding HCD_00705 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding HCD_00705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_00705 IPR023585 Isoleucine-tRNA ligase, type 1 HCD_00710 IPR002942 RNA-binding S4 domain HCD_00710 IPR025490 RNA-binding protein, HP1423 type HCD_00710 IPR036986 HCD_00710 HCD_00720 IPR002718 Outer membrane protein, Helicobacter HCD_00730 IPR001737 Ribosomal RNA adenine methylase transferase HCD_00730 IPR011530 Ribosomal RNA adenine dimethylase HCD_00730 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site HCD_00730 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal HCD_00730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_00735 IPR001279 Beta-lactamase-like HCD_00735 IPR001587 Ribonuclease J, conserved site HCD_00735 IPR004613 Ribonuclease J HCD_00735 IPR011108 RNA-metabolising metallo-beta-lactamase HCD_00735 IPR030854 HCD_00735 HCD_00735 IPR036866 HCD_00735 HCD_00740 IPR000644 CBS domain HCD_00740 IPR001347 Sugar isomerase (SIS) HCD_00740 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type HCD_00745 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr HCD_00745 IPR007197 Radical SAM HCD_00745 IPR013785 Aldolase-type TIM barrel HCD_00745 IPR027492 Dual-specificity RNA methyltransferase RlmN HCD_00750 IPR002718 Outer membrane protein, Helicobacter HCD_00760 IPR005828 General substrate transporter HCD_00760 IPR036259 HCD_00760 HCD_00770 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain HCD_00770 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site HCD_00770 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase HCD_00770 IPR029000 Cyclophilin-like domain HCD_00775 IPR003751 Carbon storage regulator HCD_00775 IPR036107 HCD_00775 HCD_00780 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase HCD_00780 IPR006204 GHMP kinase N-terminal domain HCD_00780 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_00780 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_00780 IPR036554 HCD_00780 HCD_00785 IPR000037 SsrA-binding protein HCD_00785 IPR020081 SsrA-binding protein, conserved site HCD_00785 IPR023620 Small protein B HCD_00790 IPR002898 MotA/TolQ/ExbB proton channel HCD_00790 IPR014172 TonB-system energizer ExbB type-2 HCD_00795 IPR003400 Biopolymer transport protein ExbD/TolR HCD_00800 IPR000271 Ribosomal protein L34 HCD_00800 IPR020939 Ribosomal protein L34, conserved site HCD_00805 IPR000100 Ribonuclease P HCD_00805 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_00810 IPR002696 Putative membrane protein insertion efficiency factor HCD_00815 IPR001708 Membrane insertase OXA1/ALB3/YidC HCD_00815 IPR019998 Membrane insertase YidC HCD_00815 IPR028053 Membrane insertase YidC, N-terminal HCD_00815 IPR028055 Membrane insertase YidC/Oxa1, C-terminal HCD_00815 IPR038210 HCD_00815 HCD_00820 IPR015946 K homology domain-like, alpha/beta HCD_00820 IPR032782 HCD_00820 HCD_00820 IPR038247 HCD_00820 HCD_00825 IPR004520 tRNA modification GTPase MnmE HCD_00825 IPR005225 Small GTP-binding protein domain HCD_00825 IPR006073 GTP binding domain HCD_00825 IPR018948 GTP-binding protein TrmE, N-terminal HCD_00825 IPR025867 tRNA modification GTPase MnmE C-terminal domain HCD_00825 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 HCD_00825 IPR027368 tRNA modification GTPase MnmE domain 2 HCD_00825 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_00835 IPR002718 Outer membrane protein, Helicobacter HCD_00840 IPR002718 Outer membrane protein, Helicobacter HCD_00855 IPR002142 Peptidase S49 HCD_00855 IPR004635 Peptidase S49, SppA HCD_00855 IPR029045 ClpP/crotonase-like domain HCD_00860 IPR002376 Formyl transferase, N-terminal HCD_00860 IPR004810 Formyltetrahydrofolate deformylase HCD_00860 IPR036477 HCD_00860 HCD_00865 IPR024952 Lipoprotein LPP20-like HCD_00875 IPR002217 Lipoprotein LPP20 HCD_00875 IPR024952 Lipoprotein LPP20-like HCD_00880 IPR014094 Penicillin-binding protein activator LpoB HCD_00885 IPR005746 Thioredoxin HCD_00885 IPR013766 Thioredoxin domain HCD_00885 IPR036249 HCD_00885 HCD_00890 IPR002495 Glycosyl transferase, family 8 HCD_00890 IPR029044 Nucleotide-diphospho-sugar transferases HCD_00900 IPR009057 Homeodomain-like HCD_00925 IPR025267 Protein of unknown function DUF4043 HCD_00970 IPR021907 Protein of unknown function DUF3519 HCD_00990 IPR006481 Bacteriophage lambda, GpS, holin HCD_01015 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_01015 IPR010095 Transposase IS605, OrfB, C-terminal HCD_01015 IPR021027 Transposase, putative, helix-turn-helix domain HCD_01020 IPR002686 Transposase IS200-like HCD_01020 IPR036515 HCD_01020 HCD_01030 IPR002718 Outer membrane protein, Helicobacter HCD_01035 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_01035 IPR004090 Chemotaxis methyl-accepting receptor HCD_01040 IPR013767 PAS fold HCD_01040 IPR035965 HCD_01040 HCD_01045 IPR004602 UvrABC system subunit A HCD_01045 IPR017871 ABC transporter, conserved site HCD_01045 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01050 IPR002718 Outer membrane protein, Helicobacter HCD_01055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_01060 IPR002903 Ribosomal RNA small subunit methyltransferase H HCD_01060 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain HCD_01060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01070 IPR002718 Outer membrane protein, Helicobacter HCD_01080 IPR006674 HD domain HCD_01085 IPR000394 RNA polymerase sigma factor 54 HCD_01085 IPR007046 RNA polymerase sigma factor 54, core-binding HCD_01085 IPR007634 RNA polymerase sigma factor 54, DNA-binding HCD_01085 IPR038709 HCD_01085 HCD_01090 IPR003439 ABC transporter-like HCD_01090 IPR003593 AAA+ ATPase domain HCD_01090 IPR017871 ABC transporter, conserved site HCD_01090 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01090 IPR030921 HCD_01090 HCD_01095 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE HCD_01095 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01100 IPR003593 AAA+ ATPase domain HCD_01100 IPR012763 DNA polymerase III, subunit gamma/ tau HCD_01100 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01105 IPR004668 Anaerobic c4-dicarboxylate membrane transporter HCD_01110 IPR004550 L-asparaginase, type II HCD_01110 IPR006034 Asparaginase/glutaminase HCD_01110 IPR020827 Asparaginase/glutaminase, active site 1 HCD_01110 IPR027473 L-asparaginase, C-terminal domain HCD_01110 IPR027474 L-asparaginase, N-terminal HCD_01110 IPR027475 Asparaginase/glutaminase, active site 2 HCD_01110 IPR036152 HCD_01110 HCD_01110 IPR037152 HCD_01110 HCD_01115 IPR009488 Protein of unknown function DUF1104 HCD_01120 IPR009488 Protein of unknown function DUF1104 HCD_01125 IPR004630 Uncharacterised protein family UPF0324, bacteria HCD_01125 IPR018383 Uncharacterised protein family UPF0324, prokaryote HCD_01130 IPR001123 Lysine-type exporter protein (LYSE/YGGA) HCD_01135 IPR002718 Outer membrane protein, Helicobacter HCD_01140 IPR001269 tRNA-dihydrouridine synthase HCD_01140 IPR013785 Aldolase-type TIM barrel HCD_01140 IPR018517 tRNA-dihydrouridine synthase, conserved site HCD_01140 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal HCD_01145 IPR002646 Poly A polymerase, head domain HCD_01145 IPR032828 HCD_01145 HCD_01150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_01150 IPR018317 Queuosine biosynthesis protein QueC HCD_01155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01175 IPR000671 Peptidase A31 family HCD_01175 IPR004419 Peptidase A31, hydrogenase expression/formation protein HCD_01175 IPR023430 Peptidase HybD-like domain HCD_01180 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit HCD_01180 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase HCD_01180 IPR016174 Di-haem cytochrome, transmembrane HCD_01185 IPR001501 Nickel-dependent hydrogenase, large subunit HCD_01185 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site HCD_01185 IPR029014 NiFe hydrogenase-like HCD_01190 IPR002686 Transposase IS200-like HCD_01190 IPR036515 HCD_01190 HCD_01195 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_01195 IPR010095 Transposase IS605, OrfB, C-terminal HCD_01195 IPR021027 Transposase, putative, helix-turn-helix domain HCD_01200 IPR001501 Nickel-dependent hydrogenase, large subunit HCD_01200 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site HCD_01200 IPR029014 NiFe hydrogenase-like HCD_01205 IPR001821 [NiFe]-hydrogenase, small subunit HCD_01205 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit HCD_01205 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal HCD_01205 IPR027394 Cytochrome-c3 hydrogenase, C-terminal HCD_01205 IPR037024 HCD_01205 HCD_01205 IPR037148 HCD_01205 HCD_01215 IPR002718 Outer membrane protein, Helicobacter HCD_01220 IPR001036 Acriflavin resistance protein HCD_01220 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains HCD_01225 IPR006143 RND efflux pump, membrane fusion protein HCD_01225 IPR032317 HCD_01225 HCD_01230 IPR003423 Outer membrane efflux protein HCD_01235 IPR000257 Uroporphyrinogen decarboxylase (URO-D) HCD_01235 IPR006361 Uroporphyrinogen decarboxylase HemE HCD_01235 IPR038071 HCD_01235 HCD_01245 IPR000445 Helix-hairpin-helix motif HCD_01245 IPR003265 HhH-GPD domain HCD_01245 IPR011257 DNA glycosylase HCD_01245 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal HCD_01250 IPR001029 Flagellin, D0/D1 domain HCD_01250 IPR001492 Flagellin HCD_01250 IPR010810 Flagellin hook, IN motif HCD_01255 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_01255 IPR004090 Chemotaxis methyl-accepting receptor HCD_01255 IPR025991 Chemoreceptor zinc-binding domain HCD_01260 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site HCD_01260 IPR004839 Aminotransferase, class I/classII HCD_01260 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_01260 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_01260 IPR015424 Pyridoxal phosphate-dependent transferase HCD_01265 IPR001264 Glycosyl transferase, family 51 HCD_01265 IPR001460 Penicillin-binding protein, transpeptidase HCD_01265 IPR012338 Beta-lactamase/transpeptidase-like HCD_01265 IPR023346 Lysozyme-like domain HCD_01265 IPR036950 HCD_01265 HCD_01270 IPR031923 HCD_01270 HCD_01270 IPR038285 HCD_01270 HCD_01275 IPR003752 Disulphide bond formation protein DsbB/BdbC HCD_01275 IPR023380 Disulphide bond formation protein DsbB-like domain HCD_01285 IPR002718 Outer membrane protein, Helicobacter HCD_01295 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain HCD_01295 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain HCD_01300 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding HCD_01300 IPR029061 Thiamin diphosphate-binding fold HCD_01305 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal HCD_01305 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II HCD_01305 IPR029061 Thiamin diphosphate-binding fold HCD_01305 IPR033412 HCD_01305 HCD_01310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_01310 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_01315 IPR003770 Uncharacterised protein family UPF0755, YceG-like HCD_01320 IPR025263 Domain of unknown function DUF3971 HCD_01320 IPR039441 HCD_01320 HCD_01325 IPR007167 Ferrous iron transporter FeoA domain HCD_01325 IPR008988 Transcriptional repressor, C-terminal HCD_01325 IPR038157 HCD_01325 HCD_01330 IPR000445 Helix-hairpin-helix motif HCD_01330 IPR003265 HhH-GPD domain HCD_01330 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif HCD_01330 IPR004035 Endonuclease III, iron-sulphur binding site HCD_01330 IPR005759 Endonuclease III HCD_01330 IPR011257 DNA glycosylase HCD_01330 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal HCD_01335 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb HCD_01335 IPR001543 Surface presentation of antigen (SpoA) HCD_01335 IPR012826 Flagellar motor switch FliN HCD_01335 IPR036429 HCD_01335 HCD_01345 IPR003538 Gram-negative bacterial TonB protein HCD_01345 IPR006260 TonB, C-terminal HCD_01345 IPR037682 HCD_01345 HCD_01350 IPR002195 Dihydroorotase, conserved site HCD_01350 IPR004721 Dihydroorotase homodimeric type HCD_01350 IPR032466 HCD_01350 HCD_01355 IPR011040 Sialidases HCD_01355 IPR036278 HCD_01355 HCD_01365 IPR000917 Sulfatase HCD_01365 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha HCD_01365 IPR017850 Alkaline-phosphatase-like, core domain HCD_01370 IPR001763 Rhodanese-like domain HCD_01370 IPR017582 tRNA 2-selenouridine synthase HCD_01370 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01370 IPR036873 HCD_01370 HCD_01375 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase HCD_01375 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HCD_01375 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HCD_01375 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site HCD_01375 IPR036291 HCD_01375 HCD_01380 IPR000223 Peptidase S26A, signal peptidase I HCD_01380 IPR015927 Peptidase S24/S26A/S26B/S26C HCD_01380 IPR019758 Peptidase S26A, signal peptidase I, conserved site HCD_01380 IPR036286 HCD_01380 HCD_01390 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family HCD_01390 IPR004785 Ribose 5-phosphate isomerase B HCD_01390 IPR036569 HCD_01390 HCD_01400 IPR000836 Phosphoribosyltransferase domain HCD_01400 IPR005764 Adenine phosphoribosyl transferase HCD_01400 IPR029057 Phosphoribosyltransferase-like HCD_01405 IPR032816 HCD_01405 HCD_01410 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal HCD_01410 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal HCD_01410 IPR011356 Leucine aminopeptidase/peptidase B HCD_01410 IPR023042 Peptidase M17, leucine aminopeptidase HCD_01415 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 HCD_01415 IPR006073 GTP binding domain HCD_01415 IPR012675 Beta-grasp domain HCD_01415 IPR012676 TGS-like HCD_01415 IPR013029 Domain of unknown function DUF933 HCD_01415 IPR023192 TGS-like domain HCD_01415 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01420 IPR023885 4Fe4S-binding SPASM domain HCD_01425 IPR002549 Uncharacterised protein family UPF0118 HCD_01430 IPR001653 Diaminopimelate epimerase, DapF HCD_01430 IPR018510 Diaminopimelate epimerase, active site HCD_01435 IPR007339 Protein of unknown function DUF417 HCD_01440 IPR010985 Ribbon-helix-helix HCD_01440 IPR013321 Arc-type ribbon-helix-helix HCD_01440 IPR031895 HCD_01440 HCD_01450 IPR001911 Ribosomal protein S21 HCD_01450 IPR018278 Ribosomal protein S21, conserved site HCD_01450 IPR038380 HCD_01450 HCD_01455 IPR002347 Glucose/ribitol dehydrogenase HCD_01455 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase HCD_01455 IPR020904 Short-chain dehydrogenase/reductase, conserved site HCD_01455 IPR036291 HCD_01455 HCD_01460 IPR003231 Acyl carrier protein (ACP) HCD_01460 IPR006162 Phosphopantetheine attachment site HCD_01460 IPR009081 Acyl carrier protein-like HCD_01460 IPR036736 HCD_01460 HCD_01465 IPR014030 Beta-ketoacyl synthase, N-terminal HCD_01465 IPR014031 Beta-ketoacyl synthase, C-terminal HCD_01465 IPR016039 Thiolase-like HCD_01465 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 HCD_01465 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain HCD_01470 IPR001095 Acetyl-CoA carboxylase, alpha subunit HCD_01470 IPR029045 ClpP/crotonase-like domain HCD_01480 IPR000531 TonB-dependent receptor, beta-barrel HCD_01480 IPR012910 TonB-dependent receptor, plug HCD_01480 IPR036942 HCD_01480 HCD_01480 IPR037066 HCD_01480 HCD_01485 IPR002718 Outer membrane protein, Helicobacter HCD_01490 IPR002582 Holo-[acyl carrier protein] synthase HCD_01490 IPR004568 Phosphopantethiene-protein transferase domain HCD_01490 IPR008278 4'-phosphopantetheinyl transferase superfamily HCD_01490 IPR037143 HCD_01490 HCD_01495 IPR005503 Flagellar basal body-associated protein FliL HCD_01500 IPR004398 RNA methyltransferase, RsmD HCD_01500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01510 IPR002718 Outer membrane protein, Helicobacter HCD_01515 IPR018576 Restriction endonuclease, type II, Pab1 HCD_01520 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_01520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01525 IPR000565 DNA topoisomerase, type IIA, subunit B HCD_01525 IPR001241 DNA topoisomerase, type IIA HCD_01525 IPR002288 DNA gyrase B subunit, C-terminal HCD_01525 IPR003594 Histidine kinase-like ATPase, C-terminal domain HCD_01525 IPR006171 Toprim domain HCD_01525 IPR011557 DNA gyrase, subunit B HCD_01525 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 HCD_01525 IPR013760 DNA topoisomerase, type IIA-like domain HCD_01525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_01525 IPR018522 DNA topoisomerase, type IIA, conserved site HCD_01525 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_01525 IPR036890 HCD_01525 HCD_01530 IPR001001 DNA polymerase III, beta chain HCD_01530 IPR022634 DNA polymerase III, beta chain, N-terminal HCD_01530 IPR022635 DNA polymerase III, beta chain, C-terminal HCD_01530 IPR022637 DNA polymerase III, beta chain, central HCD_01535 IPR003187 Phospholipase A1 HCD_01535 IPR036541 HCD_01535 HCD_01540 IPR000175 Sodium:neurotransmitter symporter HCD_01540 IPR037272 HCD_01540 HCD_01545 IPR037272 HCD_01545 HCD_01550 IPR000175 Sodium:neurotransmitter symporter HCD_01550 IPR037272 HCD_01550 HCD_01555 IPR006683 Thioesterase superfamily HCD_01555 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family HCD_01555 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site HCD_01555 IPR029069 HotDog domain HCD_01560 IPR007454 Uncharacterised protein family UPF0250 HCD_01560 IPR027471 YbeD-like domain HCD_01565 IPR004101 Mur ligase, C-terminal HCD_01565 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase HCD_01565 IPR013221 Mur ligase, central HCD_01565 IPR018109 Folylpolyglutamate synthetase, conserved site HCD_01565 IPR036565 HCD_01565 HCD_01565 IPR036615 HCD_01565 HCD_01570 IPR000715 Glycosyl transferase, family 4 HCD_01570 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase HCD_01570 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site HCD_01575 IPR007876 Neuraminyllactose-binding hemagglutinin HCD_01575 IPR038531 HCD_01575 HCD_01580 IPR001383 Ribosomal protein L28 HCD_01580 IPR026569 Ribosomal protein L28/L24 HCD_01580 IPR034704 HCD_01580 HCD_01580 IPR037147 HCD_01580 HCD_01585 IPR003148 Regulator of K+ conductance, N-terminal HCD_01585 IPR006037 Regulator of K+ conductance, C-terminal HCD_01585 IPR036291 HCD_01585 HCD_01585 IPR036721 HCD_01585 HCD_01590 IPR000504 RNA recognition motif domain HCD_01590 IPR012677 Nucleotide-binding, alpha-beta plait HCD_01590 IPR035979 HCD_01590 HCD_01595 IPR000568 ATPase, F0 complex, subunit A HCD_01595 IPR023011 ATPase, F0 complex, subunit A, active site HCD_01595 IPR035908 HCD_01595 HCD_01600 IPR000644 CBS domain HCD_01600 IPR001093 IMP dehydrogenase/GMP reductase HCD_01600 IPR005990 Inosine-5'-monophosphate dehydrogenase HCD_01600 IPR013785 Aldolase-type TIM barrel HCD_01600 IPR015875 IMP dehydrogenase / GMP reductase, conserved site HCD_01605 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit HCD_01605 IPR020556 Amidase, conserved site HCD_01605 IPR023631 Amidase signature domain HCD_01605 IPR036928 HCD_01605 HCD_01610 IPR001977 Dephospho-CoA kinase HCD_01610 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01615 IPR001045 Spermidine/spermine synthases family HCD_01615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01615 IPR035246 HCD_01615 HCD_01615 IPR037163 HCD_01615 HCD_01625 IPR005225 Small GTP-binding protein domain HCD_01625 IPR006073 GTP binding domain HCD_01625 IPR015946 K homology domain-like, alpha/beta HCD_01625 IPR016484 GTP-binding protein EngA HCD_01625 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01625 IPR032859 HCD_01625 HCD_01630 IPR000119 Histone-like bacterial DNA-binding protein HCD_01630 IPR010992 Integration host factor (IHF)-like DNA-binding domain HCD_01635 IPR024952 Lipoprotein LPP20-like HCD_01645 IPR005017 Membrane protein, aromatic hydrocarbon degradation HCD_01650 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain HCD_01650 IPR020025 Pseudaminic acid biosynthesis, PseB HCD_01650 IPR036291 HCD_01650 HCD_01655 IPR003382 Flavoprotein HCD_01655 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC HCD_01655 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal HCD_01655 IPR035929 HCD_01655 HCD_01655 IPR036551 HCD_01655 HCD_01665 IPR001207 Transposase, mutator type HCD_01670 IPR001207 Transposase, mutator type HCD_01680 IPR009251 Alpha-2,3-sialyltransferase HCD_01680 IPR036715 HCD_01680 HCD_01685 IPR003329 Acylneuraminate cytidylyltransferase HCD_01685 IPR029044 Nucleotide-diphospho-sugar transferases HCD_01690 IPR003331 UDP-N-acetylglucosamine 2-epimerase HCD_01690 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing HCD_01695 IPR013132 N-acetylneuraminic acid synthase, N-terminal HCD_01695 IPR013785 Aldolase-type TIM barrel HCD_01695 IPR013974 SAF domain HCD_01695 IPR036732 HCD_01695 HCD_01700 IPR013785 Aldolase-type TIM barrel HCD_01700 IPR022998 Thiamin phosphate synthase superfamily HCD_01700 IPR034291 HCD_01700 HCD_01700 IPR036206 HCD_01700 HCD_01705 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase HCD_01705 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase HCD_01705 IPR029056 Ribokinase-like HCD_01710 IPR000417 Hydroxyethylthiazole kinase HCD_01710 IPR029056 Ribokinase-like HCD_01715 IPR007759 DNA-directed RNA polymerase delta subunit/Asxl HCD_01720 IPR003439 ABC transporter-like HCD_01720 IPR003593 AAA+ ATPase domain HCD_01720 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01720 IPR032781 HCD_01720 HCD_01725 IPR002686 Transposase IS200-like HCD_01725 IPR036515 HCD_01725 HCD_01730 IPR021027 Transposase, putative, helix-turn-helix domain HCD_01735 IPR010095 Transposase IS605, OrfB, C-terminal HCD_01760 IPR001347 Sugar isomerase (SIS) HCD_01760 IPR004515 Phosphoheptose isomerase HCD_01765 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site HCD_01765 IPR004821 Cytidyltransferase-like domain HCD_01765 IPR011611 Carbohydrate kinase PfkB HCD_01765 IPR011913 RfaE bifunctional protein, domain I HCD_01765 IPR011914 RfaE bifunctional protein, domain II HCD_01765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_01765 IPR023030 Bifunctional protein HldE HCD_01765 IPR029056 Ribokinase-like HCD_01770 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain HCD_01770 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase HCD_01770 IPR036291 HCD_01770 HCD_01775 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase HCD_01775 IPR006543 Histidinol-phosphate phosphatase HCD_01775 IPR006549 HAD-superfamily hydrolase,subfamily IIIA HCD_01775 IPR023214 HAD-like domain HCD_01775 IPR036412 HCD_01775 HCD_01780 IPR039447 HCD_01780 HCD_01785 IPR004619 Type III pantothenate kinase HCD_01790 IPR015943 WD40/YVTN repeat-like-containing domain HCD_01790 IPR036322 HCD_01790 HCD_01800 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase HCD_01800 IPR029054 dUTPase-like HCD_01800 IPR036157 HCD_01800 HCD_01805 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal HCD_01805 IPR006359 Transcription elongation factor GreA HCD_01805 IPR018151 Transcription elongation factor, GreA/GreB, conserved site HCD_01805 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal HCD_01805 IPR023459 Transcription elongation factor GreA/GreB family HCD_01805 IPR028624 Transcription elongation factor GreA/GreB HCD_01805 IPR036805 HCD_01805 HCD_01805 IPR036953 HCD_01805 HCD_01810 IPR003835 Glycosyl transferase, family 19 HCD_01820 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF HCD_01820 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site HCD_01825 IPR001444 Flagellar basal body rod protein, N-terminal HCD_01825 IPR010810 Flagellin hook, IN motif HCD_01825 IPR010930 Flagellar basal-body/hook protein, C-terminal domain HCD_01825 IPR011491 Flagellar basal body FlaE HCD_01825 IPR012835 Flagellar hook FlgE HCD_01825 IPR020013 Fagellar hook-basal body protein, FlgE/F/G HCD_01825 IPR037058 HCD_01825 HCD_01825 IPR037925 HCD_01825 HCD_01830 IPR004624 PhnA protein HCD_01830 IPR013987 PhnA protein, N-terminal HCD_01830 IPR013988 PhnA protein, C-terminal HCD_01845 IPR002226 Catalase haem-binding site HCD_01845 IPR010582 Catalase immune-responsive domain HCD_01845 IPR011614 Catalase core domain HCD_01845 IPR018028 Catalase, mono-functional, haem-containing HCD_01845 IPR020835 Catalase-like domain HCD_01845 IPR024708 Catalase active site HCD_01845 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 HCD_01845 IPR037060 HCD_01845 HCD_01860 IPR002176 Crossover junction endodeoxyribonuclease RuvC HCD_01860 IPR012337 Ribonuclease H-like domain HCD_01860 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site HCD_01860 IPR036397 HCD_01860 HCD_01865 IPR003842 Vacuolating cytotoxin HCD_01865 IPR005546 Autotransporter beta-domain HCD_01865 IPR006315 Outer membrane autotransporter barrel HCD_01865 IPR036709 HCD_01865 HCD_01870 IPR003842 Vacuolating cytotoxin HCD_01870 IPR005546 Autotransporter beta-domain HCD_01870 IPR036709 HCD_01870 HCD_01875 IPR003842 Vacuolating cytotoxin HCD_01875 IPR005546 Autotransporter beta-domain HCD_01875 IPR036709 HCD_01875 HCD_01880 IPR000085 Bacterial DNA recombination protein RuvA HCD_01880 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 HCD_01880 IPR010994 RuvA domain 2-like HCD_01880 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal HCD_01880 IPR012340 Nucleic acid-binding, OB-fold HCD_01880 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial HCD_01880 IPR036267 HCD_01880 HCD_01885 IPR005646 Protein of unknown function DUF342 HCD_01890 IPR004268 Flagellin assembly, membrane protein MviN HCD_01895 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding HCD_01895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_01895 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR HCD_01895 IPR015803 Cysteine-tRNA ligase HCD_01895 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase HCD_01895 IPR032678 HCD_01895 HCD_01900 IPR003842 Vacuolating cytotoxin HCD_01900 IPR005546 Autotransporter beta-domain HCD_01900 IPR006315 Outer membrane autotransporter barrel HCD_01900 IPR036709 HCD_01900 HCD_01905 IPR024445 Transposase, ISXO2-like HCD_01910 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_01910 IPR012327 D12 class N6 adenine-specific DNA methyltransferase HCD_01910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01915 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_01915 IPR012263 Adenine modification methylase, M.EcoRV-type HCD_01915 IPR012327 D12 class N6 adenine-specific DNA methyltransferase HCD_01915 IPR023095 Adenine-specific methyltransferase, domain 2 HCD_01915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01920 IPR018573 Restriction endonuclease, type II, AlwI HCD_01925 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_01925 IPR011639 Restriction modification methylase Eco57I HCD_01925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01930 IPR013986 DExx box DNA helicase domain HCD_01930 IPR014017 DNA helicase, UvrD-like, C-terminal HCD_01930 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_01930 IPR034739 HCD_01930 HCD_01950 IPR001525 C-5 cytosine methyltransferase HCD_01950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01950 IPR031303 HCD_01950 HCD_01955 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_01955 IPR010095 Transposase IS605, OrfB, C-terminal HCD_01955 IPR021027 Transposase, putative, helix-turn-helix domain HCD_01960 IPR002686 Transposase IS200-like HCD_01960 IPR036515 HCD_01960 HCD_01965 IPR001525 C-5 cytosine methyltransferase HCD_01965 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_01965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_01970 IPR018461 Na+/H+ antiporter, NhaC-like HCD_01975 IPR006056 Enamine/imine deaminase YjgF-like HCD_01975 IPR006175 YjgF/Yer057p/UK114 family HCD_01975 IPR019897 YjgF-like protein, conserved site HCD_01975 IPR035959 HCD_01975 HCD_01980 IPR006076 FAD dependent oxidoreductase HCD_01980 IPR036188 HCD_01980 HCD_01985 IPR001463 Sodium:alanine symporter HCD_01985 IPR002293 Amino acid/polyamine transporter I HCD_01990 IPR000821 Alanine racemase HCD_01990 IPR001608 Alanine racemase, N-terminal HCD_01990 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal HCD_01990 IPR011079 Alanine racemase, C-terminal HCD_01990 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site HCD_01990 IPR029066 PLP-binding barrel HCD_01995 IPR001638 Extracellular solute-binding protein, family 3 HCD_01995 IPR018313 Extracellular solute-binding protein, family 3, conserved site HCD_02000 IPR000515 MetI-like domain HCD_02000 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family HCD_02000 IPR035906 HCD_02000 HCD_02005 IPR002718 Outer membrane protein, Helicobacter HCD_02010 IPR002718 Outer membrane protein, Helicobacter HCD_02025 IPR003742 SPOUT methyltransferase, predicted HCD_02025 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HCD_02025 IPR029028 Alpha/beta knot methyltransferases HCD_02030 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit HCD_02030 IPR029045 ClpP/crotonase-like domain HCD_02030 IPR034733 HCD_02030 HCD_02035 IPR022572 DNA replication/recombination mediator RecO, N-terminal HCD_02040 IPR008136 CinA, C-terminal HCD_02040 IPR036653 HCD_02040 HCD_02045 IPR003959 ATPase, AAA-type, core HCD_02045 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02050 IPR011856 tRNA endonuclease-like domain HCD_02055 IPR001525 C-5 cytosine methyltransferase HCD_02055 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_02055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_02055 IPR031303 HCD_02055 HCD_02060 IPR000640 Translation elongation factor EFG, V domain HCD_02060 IPR000795 Elongation factor, GTP-binding domain HCD_02060 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 HCD_02060 IPR005225 Small GTP-binding protein domain HCD_02060 IPR006297 Elongation factor 4 HCD_02060 IPR009000 Translation protein, beta-barrel domain HCD_02060 IPR013842 GTP-binding protein LepA, C-terminal HCD_02060 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02060 IPR031157 HCD_02060 HCD_02060 IPR035647 HCD_02060 HCD_02060 IPR038363 HCD_02060 HCD_02065 IPR005474 Transketolase, N-terminal HCD_02065 IPR005475 Transketolase-like, pyrimidine-binding domain HCD_02065 IPR005477 Deoxyxylulose-5-phosphate synthase HCD_02065 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II HCD_02065 IPR020826 Transketolase binding site HCD_02065 IPR029061 Thiamin diphosphate-binding fold HCD_02065 IPR033248 HCD_02065 HCD_02070 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE HCD_02075 IPR000090 Flagellar motor switch protein FliG HCD_02075 IPR011002 Flagellar motor switch protein FliG, alpha-helical HCD_02075 IPR023087 HCD_02075 HCD_02075 IPR028263 Flagellar motor switch protein FliG, N-terminal domain HCD_02075 IPR032779 HCD_02075 HCD_02080 IPR000067 Flagellar M-ring protein FliF HCD_02080 IPR006182 Secretory protein YscJ/FliF HCD_02080 IPR013556 Flagellar M-ring C-terminal HCD_02085 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HCD_02085 IPR036938 HCD_02085 HCD_02090 IPR004468 CTP synthase HCD_02090 IPR017456 CTP synthase, N-terminal HCD_02090 IPR017926 Glutamine amidotransferase HCD_02090 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02090 IPR029062 Class I glutamine amidotransferase-like HCD_02095 IPR001667 DDH domain HCD_02095 IPR003156 DHHA1 domain HCD_02095 IPR004610 Bacterial RecJ exonuclease HCD_02095 IPR038763 HCD_02095 HCD_02100 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F HCD_02100 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site HCD_02100 IPR020103 Pseudouridine synthase, catalytic domain HCD_02105 IPR000055 Restriction endonuclease, type I, HsdS HCD_02110 IPR003356 DNA methylase, adenine-specific HCD_02110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_02115 IPR005227 Resolvase, holliday junction-type, YqgF-like HCD_02115 IPR006641 YqgF/RNase H-like domain HCD_02115 IPR012337 Ribonuclease H-like domain HCD_02115 IPR037027 HCD_02115 HCD_02120 IPR003488 DNA recombination-mediator protein A HCD_02125 IPR005527 Septum formation topological specificity factor MinE HCD_02125 IPR036707 HCD_02125 HCD_02130 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain HCD_02130 IPR010223 ATP binding protein MinD, bacterial-type HCD_02130 IPR025501 ATP binding protein MinD HCD_02130 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02135 IPR000506 Acetohydroxy acid isomeroreductase C-terminal HCD_02135 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like HCD_02135 IPR013023 Acetohydroxy acid isomeroreductase HCD_02135 IPR013116 Acetohydroxy acid isomeroreductase, catalytic HCD_02135 IPR014359 Ketol-acid reductoisomerase, gammaproteobacteria HCD_02135 IPR036291 HCD_02135 HCD_02140 IPR003694 NAD(+) synthetase HCD_02140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_02140 IPR022310 NAD/GMP synthase HCD_02140 IPR022926 NH(3)-dependent NAD(+) synthetase HCD_02145 IPR003758 Tetraacyldisaccharide 4'-kinase HCD_02150 IPR000182 GNAT domain HCD_02150 IPR016181 Acyl-CoA N-acyltransferase HCD_02150 IPR020036 Pseudaminic acid biosynthesis, PseH HCD_02160 IPR003329 Acylneuraminate cytidylyltransferase HCD_02160 IPR020039 Pseudaminic acid biosynthesis, PseF HCD_02160 IPR029044 Nucleotide-diphospho-sugar transferases HCD_02165 IPR000527 Flagellar L-ring protein HCD_02170 IPR002718 Outer membrane protein, Helicobacter HCD_02175 IPR001736 Phospholipase D/Transphosphatidylase HCD_02175 IPR025202 Phospholipase D-like domain HCD_02185 IPR008145 Guanylate kinase/L-type calcium channel beta subunit HCD_02185 IPR017665 Guanylate kinase HCD_02185 IPR020590 Guanylate kinase, conserved site HCD_02185 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02190 IPR003369 Sec-independent protein translocase protein TatA/B/E HCD_02190 IPR006312 Sec-independent protein translocase protein TatA/E HCD_02195 IPR001278 Arginine-tRNA ligase HCD_02195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_02195 IPR005148 Arginyl tRNA synthetase N-terminal domain HCD_02195 IPR008909 DALR anticodon binding HCD_02195 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding HCD_02195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_02195 IPR035684 HCD_02195 HCD_02195 IPR036695 HCD_02195 HCD_02200 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain HCD_02200 IPR012349 FMN-binding split barrel HCD_02200 IPR019595 Domain of unknown function DUF2470 HCD_02200 IPR026324 Haem oxygenase, HugZ HCD_02200 IPR037119 HCD_02200 HCD_02215 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_02215 IPR010095 Transposase IS605, OrfB, C-terminal HCD_02215 IPR021027 Transposase, putative, helix-turn-helix domain HCD_02220 IPR002686 Transposase IS200-like HCD_02220 IPR036515 HCD_02220 HCD_02225 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain HCD_02225 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02250 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain HCD_02270 IPR004311 Vacuolating cytotoxin, putative HCD_02270 IPR005546 Autotransporter beta-domain HCD_02270 IPR036709 HCD_02270 HCD_02275 IPR025423 Domain of unknown function DUF4149 HCD_02280 IPR029058 Alpha/Beta hydrolase fold HCD_02285 IPR003593 AAA+ ATPase domain HCD_02285 IPR003959 ATPase, AAA-type, core HCD_02285 IPR003960 ATPase, AAA-type, conserved site HCD_02285 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02285 IPR037219 HCD_02285 HCD_02290 IPR005839 Methylthiotransferase HCD_02290 IPR006467 MiaB-like tRNA modifying enzyme HCD_02290 IPR006638 Elongator protein 3/MiaB/NifB HCD_02290 IPR007197 Radical SAM HCD_02290 IPR013848 Methylthiotransferase, N-terminal HCD_02290 IPR020612 Methylthiotransferase, conserved site HCD_02290 IPR023404 Radical SAM, alpha/beta horseshoe HCD_02290 IPR038135 HCD_02290 HCD_02295 IPR006685 Mechanosensitive ion channel MscS HCD_02295 IPR010920 Like-Sm (LSM) domain HCD_02300 IPR016037 3-dehydroquinate synthase AroB HCD_02300 IPR030960 HCD_02300 HCD_02300 IPR030963 HCD_02300 HCD_02305 IPR006037 Regulator of K+ conductance, C-terminal HCD_02305 IPR036721 HCD_02305 HCD_02310 IPR002616 tRNA-guanine(15) transglycosylase-like HCD_02310 IPR004803 Queuine tRNA-ribosyltransferase HCD_02310 IPR036511 HCD_02310 HCD_02315 IPR004960 Bacterial lipid A biosynthesis acyltransferase HCD_02320 IPR002201 Glycosyl transferase, family 9 HCD_02320 IPR011908 Lipopolysaccharide heptosyltransferase I HCD_02325 IPR003695 Ppx/GppA phosphatase HCD_02325 IPR030673 HCD_02325 HCD_02330 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_02330 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_02335 IPR011060 Ribulose-phosphate binding barrel HCD_02335 IPR013785 Aldolase-type TIM barrel HCD_02335 IPR013798 Indole-3-glycerol phosphate synthase HCD_02340 IPR002885 Pentatricopeptide repeat HCD_02340 IPR011990 Tetratricopeptide-like helical domain HCD_02345 IPR005358 Putative zinc- or iron-chelating domain containing protein HCD_02365 IPR007172 Domain of unknown function DUF374 HCD_02370 IPR005839 Methylthiotransferase HCD_02370 IPR006463 tRNA-i(6)A37 modification enzyme MiaB HCD_02370 IPR006638 Elongator protein 3/MiaB/NifB HCD_02370 IPR007197 Radical SAM HCD_02370 IPR013848 Methylthiotransferase, N-terminal HCD_02370 IPR020612 Methylthiotransferase, conserved site HCD_02370 IPR023404 Radical SAM, alpha/beta horseshoe HCD_02370 IPR038135 HCD_02370 HCD_02380 IPR006680 Amidohydrolase 1 HCD_02380 IPR011059 Metal-dependent hydrolase, composite domain HCD_02380 IPR032466 HCD_02380 HCD_02385 IPR006680 Amidohydrolase 1 HCD_02385 IPR011059 Metal-dependent hydrolase, composite domain HCD_02385 IPR032466 HCD_02385 HCD_02390 IPR003834 Cytochrome c assembly protein, transmembrane domain HCD_02395 IPR001270 ClpA/B family HCD_02395 IPR003593 AAA+ ATPase domain HCD_02395 IPR003959 ATPase, AAA-type, core HCD_02395 IPR004176 Clp, N-terminal HCD_02395 IPR018368 ClpA/B, conserved site 1 HCD_02395 IPR019489 Clp ATPase, C-terminal HCD_02395 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02395 IPR028299 ClpA/B, conserved site 2 HCD_02395 IPR036628 HCD_02395 HCD_02400 IPR001091 Restriction/modification DNA-methylase HCD_02400 IPR002941 DNA methylase N-4/N-6 HCD_02400 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site HCD_02400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_02410 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_02410 IPR010095 Transposase IS605, OrfB, C-terminal HCD_02410 IPR021027 Transposase, putative, helix-turn-helix domain HCD_02415 IPR002686 Transposase IS200-like HCD_02415 IPR036515 HCD_02415 HCD_02430 IPR012893 HipA-like, C-terminal HCD_02435 IPR002104 Integrase, catalytic HCD_02435 IPR011010 DNA breaking-rejoining enzyme, catalytic core HCD_02435 IPR013762 Integrase-like, catalytic core HCD_02445 IPR005094 Endonuclease relaxase, MobA/VirD2 HCD_02470 IPR000808 Mrp, conserved site HCD_02470 IPR002744 Domain of unknown function DUF59 HCD_02470 IPR019591 Mrp/NBP35 ATP-binding protein HCD_02470 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02470 IPR033756 HCD_02470 HCD_02470 IPR034904 HCD_02470 HCD_02475 IPR002686 Transposase IS200-like HCD_02475 IPR036515 HCD_02475 HCD_02480 IPR021027 Transposase, putative, helix-turn-helix domain HCD_02485 IPR010095 Transposase IS605, OrfB, C-terminal HCD_02490 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02500 IPR002718 Outer membrane protein, Helicobacter HCD_02505 IPR005271 tRNA (cmo5U34)-methyltransferase HCD_02505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_02510 IPR001189 Manganese/iron superoxide dismutase HCD_02510 IPR019831 Manganese/iron superoxide dismutase, N-terminal HCD_02510 IPR019832 Manganese/iron superoxide dismutase, C-terminal HCD_02510 IPR019833 Manganese/iron superoxide dismutase, binding site HCD_02510 IPR036314 HCD_02510 HCD_02510 IPR036324 HCD_02510 HCD_02515 IPR013740 Redoxin HCD_02515 IPR018219 Thiol peroxidase conserved site HCD_02515 IPR036249 HCD_02515 HCD_02525 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain HCD_02525 IPR005886 UDP-glucose 4-epimerase GalE HCD_02525 IPR036291 HCD_02525 HCD_02530 IPR001406 Pseudouridine synthase I, TruA HCD_02530 IPR020095 Pseudouridine synthase I, TruA, C-terminal HCD_02530 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain HCD_02530 IPR020103 Pseudouridine synthase, catalytic domain HCD_02535 IPR005495 Permease YjgP/YjgQ, predicted HCD_02540 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase HCD_02540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_02545 IPR000358 Ribonucleotide reductase small subunit HCD_02545 IPR009078 Ferritin-like superfamily HCD_02545 IPR012348 Ribonucleotide reductase-related HCD_02545 IPR030475 HCD_02545 HCD_02555 IPR003753 Exonuclease VII, large subunit HCD_02555 IPR020579 Exonuclease VII, large subunit, C-terminal HCD_02555 IPR025824 OB-fold nucleic acid binding domain HCD_02560 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase HCD_02560 IPR008915 Peptidase M50 HCD_02560 IPR036034 HCD_02560 HCD_02565 IPR006668 Magnesium transporter, MgtE intracellular domain HCD_02565 IPR038076 HCD_02565 HCD_02570 IPR012823 Flagellar export FliJ HCD_02575 IPR001114 Adenylosuccinate synthetase HCD_02575 IPR018220 Adenylosuccinate synthase, active site HCD_02575 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02575 IPR033128 HCD_02575 HCD_02580 IPR002718 Outer membrane protein, Helicobacter HCD_02585 IPR002718 Outer membrane protein, Helicobacter HCD_02590 IPR000515 MetI-like domain HCD_02590 IPR025966 Oligopeptide transport permease C-like, N-terminal domain HCD_02590 IPR035906 HCD_02590 HCD_02595 IPR003439 ABC transporter-like HCD_02595 IPR003593 AAA+ ATPase domain HCD_02595 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal HCD_02595 IPR017871 ABC transporter, conserved site HCD_02595 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02600 IPR007876 Neuraminyllactose-binding hemagglutinin HCD_02600 IPR038531 HCD_02600 HCD_02605 IPR001674 GMP synthase, C-terminal HCD_02605 IPR004739 GMP synthase, N-terminal HCD_02605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_02605 IPR017926 Glutamine amidotransferase HCD_02605 IPR022310 NAD/GMP synthase HCD_02605 IPR022955 GMP synthase HCD_02605 IPR029062 Class I glutamine amidotransferase-like HCD_02615 IPR036909 HCD_02615 HCD_02620 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site HCD_02620 IPR006656 Molybdopterin oxidoreductase HCD_02620 IPR006657 Molydopterin dinucleotide-binding domain HCD_02620 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase HCD_02620 IPR009010 Aspartate decarboxylase-like domain HCD_02625 IPR025002 Domain of unknown function DUF3972 HCD_02630 IPR000192 Aminotransferase class V domain HCD_02630 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_02630 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_02630 IPR015424 Pyridoxal phosphate-dependent transferase HCD_02635 IPR001310 Histidine triad (HIT) protein HCD_02635 IPR019808 Histidine triad, conserved site HCD_02635 IPR036265 HCD_02635 HCD_02640 IPR002319 Phenylalanyl-tRNA synthetase HCD_02640 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal HCD_02640 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit HCD_02640 IPR010978 tRNA-binding arm HCD_02640 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial HCD_02645 IPR002547 tRNA-binding domain HCD_02645 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit HCD_02645 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding HCD_02645 IPR005147 tRNA synthetase, B5-domain HCD_02645 IPR009061 DNA binding domain, putative HCD_02645 IPR012340 Nucleic acid-binding, OB-fold HCD_02645 IPR036690 HCD_02645 HCD_02650 IPR001986 Enolpyruvate transferase domain HCD_02650 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase HCD_02650 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta HCD_02650 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site HCD_02650 IPR036968 HCD_02650 HCD_02655 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase HCD_02660 IPR000110 Ribosomal protein S1 HCD_02660 IPR003029 Ribosomal protein S1, RNA-binding domain HCD_02660 IPR012340 Nucleic acid-binding, OB-fold HCD_02660 IPR022967 RNA-binding domain, S1 HCD_02670 IPR002912 ACT domain HCD_02670 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCD_02670 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain HCD_02670 IPR006236 D-3-phosphoglycerate dehydrogenase HCD_02670 IPR029009 Allosteric substrate binding domain HCD_02670 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 HCD_02670 IPR036291 HCD_02670 HCD_02675 IPR002830 UbiD decarboxylyase family HCD_02675 IPR022390 Menaquinone biosynthesis decarboxylase, SCO4490 HCD_02680 IPR001608 Alanine racemase, N-terminal HCD_02680 IPR011078 Uncharacterised protein family UPF0001 HCD_02680 IPR029066 PLP-binding barrel HCD_02685 IPR029052 Metallo-dependent phosphatase-like HCD_02690 IPR001789 Signal transduction response regulator, receiver domain HCD_02690 IPR002545 CheW-like protein HCD_02690 IPR011006 CheY-like superfamily HCD_02690 IPR024181 Chemotaxis response regulator CheV HCD_02690 IPR036061 HCD_02690 HCD_02695 IPR001789 Signal transduction response regulator, receiver domain HCD_02695 IPR002545 CheW-like protein HCD_02695 IPR003594 Histidine kinase-like ATPase, C-terminal domain HCD_02695 IPR004105 Histidine kinase CheA-like, homodimeric domain HCD_02695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal HCD_02695 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain HCD_02695 IPR011006 CheY-like superfamily HCD_02695 IPR036061 HCD_02695 HCD_02695 IPR036097 HCD_02695 HCD_02695 IPR036641 HCD_02695 HCD_02695 IPR036890 HCD_02695 HCD_02695 IPR037006 HCD_02695 HCD_02700 IPR002545 CheW-like protein HCD_02700 IPR036061 HCD_02700 HCD_02705 IPR002019 Urease, beta subunit HCD_02705 IPR002026 Urease, gamma/gamma-beta subunit HCD_02705 IPR008223 Urease, gamma-beta subunit HCD_02705 IPR036461 HCD_02705 HCD_02705 IPR036463 HCD_02705 HCD_02710 IPR005848 Urease, alpha subunit HCD_02710 IPR006680 Amidohydrolase 1 HCD_02710 IPR011059 Metal-dependent hydrolase, composite domain HCD_02710 IPR011612 Urease alpha-subunit, N-terminal domain HCD_02710 IPR032466 HCD_02710 HCD_02715 IPR025591 RloB-like protein HCD_02720 IPR003959 ATPase, AAA-type, core HCD_02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02730 IPR002347 Glucose/ribitol dehydrogenase HCD_02730 IPR020904 Short-chain dehydrogenase/reductase, conserved site HCD_02730 IPR036291 HCD_02730 HCD_02735 IPR002718 Outer membrane protein, Helicobacter HCD_02740 IPR000055 Restriction endonuclease, type I, HsdS HCD_02745 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_02745 IPR003356 DNA methylase, adenine-specific HCD_02745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_02750 IPR000845 Nucleoside phosphorylase domain HCD_02750 IPR004402 Purine nucleoside phosphorylase DeoD-type HCD_02750 IPR018016 Nucleoside phosphorylase, conserved site HCD_02750 IPR035994 HCD_02750 HCD_02755 IPR006124 Metalloenzyme HCD_02755 IPR010045 Phosphopentomutase HCD_02755 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha HCD_02755 IPR017850 Alkaline-phosphatase-like, core domain HCD_02755 IPR024052 Phosphopentomutase DeoB cap domain HCD_02760 IPR002668 Concentrative nucleoside transporter N-terminal domain HCD_02760 IPR011642 Nucleoside recognition Gate HCD_02760 IPR011657 Concentrative nucleoside transporter C-terminal domain HCD_02760 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial HCD_02765 IPR011701 Major facilitator superfamily HCD_02765 IPR036259 HCD_02765 HCD_02770 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase HCD_02770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_02770 IPR035107 HCD_02770 HCD_02775 IPR006153 Cation/H+ exchanger HCD_02775 IPR038770 HCD_02775 HCD_02780 IPR002528 Multi antimicrobial extrusion protein HCD_02785 IPR001148 Alpha carbonic anhydrase HCD_02785 IPR036398 HCD_02785 HCD_02790 IPR001763 Rhodanese-like domain HCD_02790 IPR036873 HCD_02790 HCD_02795 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site HCD_02795 IPR000534 Semialdehyde dehydrogenase, NAD-binding HCD_02795 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type HCD_02795 IPR012080 Aspartate-semialdehyde dehydrogenase HCD_02795 IPR012280 Semialdehyde dehydrogenase, dimerisation domain HCD_02795 IPR036291 HCD_02795 HCD_02800 IPR004154 Anticodon-binding HCD_02800 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit HCD_02800 IPR015807 Histidine-tRNA ligase HCD_02800 IPR036621 HCD_02800 HCD_02805 IPR002201 Glycosyl transferase, family 9 HCD_02805 IPR011910 Lipopolysaccharide heptosyltransferase II HCD_02810 IPR002563 Flavin reductase-like, FMN-binding HCD_02810 IPR012349 FMN-binding split barrel HCD_02820 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_02820 IPR010095 Transposase IS605, OrfB, C-terminal HCD_02820 IPR021027 Transposase, putative, helix-turn-helix domain HCD_02825 IPR002686 Transposase IS200-like HCD_02825 IPR036515 HCD_02825 HCD_02830 IPR001650 Helicase, C-terminal HCD_02830 IPR001943 UVR domain HCD_02830 IPR004807 UvrABC system, subunit B HCD_02830 IPR006935 Helicase/UvrB domain HCD_02830 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_02830 IPR024759 UvrB, YAD/RRR-motif-containing domain HCD_02830 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02830 IPR036876 HCD_02830 HCD_02855 IPR000640 Translation elongation factor EFG, V domain HCD_02855 IPR000795 Elongation factor, GTP-binding domain HCD_02855 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 HCD_02855 IPR004540 Translation elongation factor EFG/EF2 HCD_02855 IPR005225 Small GTP-binding protein domain HCD_02855 IPR005517 Translation elongation factor EFG/EF2, domain IV HCD_02855 IPR009000 Translation protein, beta-barrel domain HCD_02855 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_02855 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_02855 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02855 IPR031157 HCD_02855 HCD_02855 IPR035647 HCD_02855 HCD_02860 IPR000235 Ribosomal protein S5/S7 HCD_02860 IPR005717 Ribosomal protein S7, bacterial/organellar-type HCD_02860 IPR020606 Ribosomal protein S7, conserved site HCD_02860 IPR023798 Ribosomal protein S7 domain HCD_02860 IPR036823 HCD_02860 HCD_02865 IPR005679 Ribosomal protein S12, bacteria HCD_02865 IPR006032 Ribosomal protein S12/S23 HCD_02865 IPR012340 Nucleic acid-binding, OB-fold HCD_02870 IPR000722 RNA polymerase, alpha subunit HCD_02870 IPR006592 RNA polymerase, N-terminal HCD_02870 IPR007066 RNA polymerase Rpb1, domain 3 HCD_02870 IPR007080 RNA polymerase Rpb1, domain 1 HCD_02870 IPR007081 RNA polymerase Rpb1, domain 5 HCD_02870 IPR007083 RNA polymerase Rpb1, domain 4 HCD_02870 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 HCD_02870 IPR007121 RNA polymerase, beta subunit, conserved site HCD_02870 IPR007641 RNA polymerase Rpb2, domain 7 HCD_02870 IPR007642 RNA polymerase Rpb2, domain 2 HCD_02870 IPR007644 RNA polymerase, beta subunit, protrusion HCD_02870 IPR007645 RNA polymerase Rpb2, domain 3 HCD_02870 IPR010243 DNA-directed RNA polymerase, beta subunit HCD_02870 IPR012754 DNA-directed RNA polymerase, subunit beta-prime HCD_02870 IPR014724 RNA polymerase Rpb2, OB-fold HCD_02870 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain HCD_02870 IPR037033 HCD_02870 HCD_02870 IPR037034 HCD_02870 HCD_02870 IPR038120 HCD_02870 HCD_02875 IPR000206 Ribosomal protein L7/L12 HCD_02875 IPR008932 Ribosomal protein L7/L12, oligomerisation HCD_02875 IPR013823 Ribosomal protein L7/L12, C-terminal HCD_02875 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like HCD_02875 IPR036235 HCD_02875 HCD_02880 IPR001790 Ribosomal protein L10/acidic P0 HCD_02880 IPR002363 Ribosomal protein L10, eubacterial, conserved site HCD_02880 IPR022973 Ribosomal protein L10 HCD_02885 IPR002143 Ribosomal protein L1 HCD_02885 IPR005878 Ribosomal protein L1, bacterial-type HCD_02885 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich HCD_02885 IPR023673 Ribosomal protein L1, conserved site HCD_02885 IPR023674 Ribosomal protein L1-like HCD_02885 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein HCD_02890 IPR000911 Ribosomal protein L11/L12 HCD_02890 IPR006519 Ribosomal protein L11, bacterial-type HCD_02890 IPR020783 Ribosomal protein L11, C-terminal HCD_02890 IPR020784 Ribosomal protein L11, N-terminal HCD_02890 IPR020785 Ribosomal protein L11, conserved site HCD_02890 IPR036769 HCD_02890 HCD_02890 IPR036796 HCD_02890 HCD_02895 IPR001062 Transcription antitermination protein, NusG HCD_02895 IPR005824 KOW HCD_02895 IPR006645 NusG, N-terminal HCD_02895 IPR008991 Translation protein SH3-like domain HCD_02895 IPR014722 Ribosomal protein L2 domain 2 HCD_02895 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site HCD_02895 IPR036735 HCD_02895 HCD_02900 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit HCD_02900 IPR005807 SecE subunit of protein translocation complex HCD_02900 IPR038379 HCD_02900 HCD_02905 IPR001705 Ribosomal protein L33 HCD_02905 IPR011332 Zinc-binding ribosomal protein HCD_02905 IPR018264 Ribosomal protein L33, conserved site HCD_02905 IPR038584 HCD_02905 HCD_02910 IPR000795 Elongation factor, GTP-binding domain HCD_02910 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal HCD_02910 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 HCD_02910 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle HCD_02910 IPR005225 Small GTP-binding protein domain HCD_02910 IPR009000 Translation protein, beta-barrel domain HCD_02910 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal HCD_02910 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02910 IPR031157 HCD_02910 HCD_02915 IPR003439 ABC transporter-like HCD_02915 IPR003593 AAA+ ATPase domain HCD_02915 IPR017871 ABC transporter, conserved site HCD_02915 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_02915 IPR036640 HCD_02915 HCD_02925 IPR023198 Phosphoglycolate phosphatase, domain 2 HCD_02925 IPR023214 HAD-like domain HCD_02925 IPR036412 HCD_02925 HCD_02930 IPR009488 Protein of unknown function DUF1104 HCD_02935 IPR002718 Outer membrane protein, Helicobacter HCD_02940 IPR000454 ATPase, F0 complex, subunit C HCD_02940 IPR002379 V-ATPase proteolipid subunit C-like domain HCD_02940 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site HCD_02940 IPR035921 HCD_02940 HCD_02940 IPR038662 HCD_02940 HCD_02945 IPR001247 Exoribonuclease, phosphorolytic domain 1 HCD_02945 IPR004087 K Homology domain HCD_02945 IPR004088 K Homology domain, type 1 HCD_02945 IPR012162 Polyribonucleotide nucleotidyltransferase HCD_02945 IPR012340 Nucleic acid-binding, OB-fold HCD_02945 IPR015847 Exoribonuclease, phosphorolytic domain 2 HCD_02945 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain HCD_02945 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_02945 IPR022967 RNA-binding domain, S1 HCD_02945 IPR027408 PNPase/RNase PH domain HCD_02945 IPR036345 HCD_02945 HCD_02945 IPR036456 HCD_02945 HCD_02945 IPR036612 HCD_02945 HCD_02950 IPR029057 Phosphoribosyltransferase-like HCD_02955 IPR007543 Organic solvent tolerance protein, C-terminal HCD_02955 IPR020889 Lipopolysaccharide assembly, LptD HCD_02960 IPR010432 RDD HCD_02965 IPR000115 Phosphoribosylglycinamide synthetase HCD_02965 IPR011054 Rudiment single hybrid motif HCD_02965 IPR013815 ATP-grasp fold, subdomain 1 HCD_02965 IPR016185 Pre-ATP-grasp domain HCD_02965 IPR020560 Phosphoribosylglycinamide synthetase, C-domain HCD_02965 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HCD_02965 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal HCD_02965 IPR037123 HCD_02965 HCD_02975 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_02975 IPR010095 Transposase IS605, OrfB, C-terminal HCD_02975 IPR021027 Transposase, putative, helix-turn-helix domain HCD_02980 IPR002686 Transposase IS200-like HCD_02980 IPR036515 HCD_02980 HCD_02985 IPR002104 Integrase, catalytic HCD_02985 IPR010998 Integrase, Lambda-type, N-terminal HCD_02985 IPR011010 DNA breaking-rejoining enzyme, catalytic core HCD_02985 IPR013762 Integrase-like, catalytic core HCD_03010 IPR015061 Domain of unknown function DUF1882 HCD_03015 IPR001085 Serine hydroxymethyltransferase HCD_03015 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_03015 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_03015 IPR015424 Pyridoxal phosphate-dependent transferase HCD_03015 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site HCD_03015 IPR039429 HCD_03015 HCD_03020 IPR002313 Lysine-tRNA ligase, class II HCD_03020 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) HCD_03020 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type HCD_03020 IPR012340 Nucleic acid-binding, OB-fold HCD_03020 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal HCD_03025 IPR003825 Colicin V production, CvpA HCD_03030 IPR003010 Carbon-nitrogen hydrolase HCD_03030 IPR004563 Apolipoprotein N-acyltransferase HCD_03030 IPR036526 HCD_03030 HCD_03035 IPR003439 ABC transporter-like HCD_03035 IPR003593 AAA+ ATPase domain HCD_03035 IPR017871 ABC transporter, conserved site HCD_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03040 IPR013132 N-acetylneuraminic acid synthase, N-terminal HCD_03040 IPR013785 Aldolase-type TIM barrel HCD_03040 IPR013974 SAF domain HCD_03040 IPR020030 Pseudaminic acid biosynthesis, PseI HCD_03040 IPR036732 HCD_03040 HCD_03045 IPR001059 Translation elongation factor P/YeiP, central HCD_03045 IPR008991 Translation protein SH3-like domain HCD_03045 IPR011768 Translation elongation factor P HCD_03045 IPR012340 Nucleic acid-binding, OB-fold HCD_03045 IPR013185 Translation elongation factor, KOW-like HCD_03045 IPR013852 Translation elongation factor P/YeiP, conserved site HCD_03045 IPR014722 Ribosomal protein L2 domain 2 HCD_03045 IPR015365 Elongation factor P, C-terminal HCD_03045 IPR020599 Translation elongation factor P/YeiP HCD_03050 IPR000771 Ketose-bisphosphate aldolase, class-II HCD_03050 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 HCD_03050 IPR013785 Aldolase-type TIM barrel HCD_03055 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type HCD_03055 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site HCD_03055 IPR027304 Trigger factor/SurA domain HCD_03065 IPR002010 Type III secretion system inner membrane R protein HCD_03065 IPR006303 Flagellar biosynthesis protein FliR HCD_03070 IPR001453 Molybdopterin binding domain HCD_03070 IPR005110 MoeA, N-terminal and linker domain HCD_03070 IPR008284 Molybdenum cofactor biosynthesis, conserved site HCD_03070 IPR036135 HCD_03070 HCD_03070 IPR036425 HCD_03070 HCD_03070 IPR036688 HCD_03070 HCD_03075 IPR000352 Peptide chain release factor class I/class II HCD_03075 IPR004374 Peptide chain release factor 2 HCD_03075 IPR005139 Peptide chain release factor HCD_03085 IPR001539 Peptidase U32 HCD_03090 IPR011990 Tetratricopeptide-like helical domain HCD_03100 IPR001789 Signal transduction response regulator, receiver domain HCD_03100 IPR001867 Signal transduction response regulator, C-terminal HCD_03100 IPR011006 CheY-like superfamily HCD_03100 IPR016032 Signal transduction response regulator, C-terminal effector HCD_03100 IPR036388 HCD_03100 HCD_03105 IPR003594 Histidine kinase-like ATPase, C-terminal domain HCD_03105 IPR003660 HAMP linker domain HCD_03105 IPR036097 HCD_03105 HCD_03105 IPR036890 HCD_03105 HCD_03110 IPR001731 Porphobilinogen synthase HCD_03110 IPR013785 Aldolase-type TIM barrel HCD_03110 IPR030656 HCD_03110 HCD_03115 IPR002876 Transcriptional regulator TACO1-like HCD_03115 IPR017856 Integrase, N-terminal zinc-binding domain-like HCD_03115 IPR026564 Transcriptional regulator TACO1-like, domain 3 HCD_03115 IPR029072 YebC-like HCD_03120 IPR006597 Sel1-like HCD_03120 IPR011990 Tetratricopeptide-like helical domain HCD_03125 IPR002495 Glycosyl transferase, family 8 HCD_03125 IPR029044 Nucleotide-diphospho-sugar transferases HCD_03130 IPR002718 Outer membrane protein, Helicobacter HCD_03140 IPR029151 Periplasmic sensor domain-like HCD_03145 IPR000623 Shikimate kinase/Threonine synthase-like 1 HCD_03145 IPR023000 Shikimate kinase, conserved site HCD_03145 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03145 IPR031322 HCD_03145 HCD_03150 IPR021731 AMIN domain HCD_03160 IPR000941 Enolase HCD_03160 IPR020809 Enolase, conserved site HCD_03160 IPR020810 Enolase, C-terminal HCD_03160 IPR020811 Enolase, N-terminal HCD_03160 IPR029017 Enolase N-terminal domain-like HCD_03160 IPR036849 HCD_03160 HCD_03165 IPR003593 AAA+ ATPase domain HCD_03165 IPR013765 DNA recombination and repair protein RecA HCD_03165 IPR020584 DNA recombination/repair protein RecA, conserved site HCD_03165 IPR023400 DNA recombination and repair protein RecA, C-terminal HCD_03165 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03170 IPR003773 Menaquinone biosynthesis enzyme HCD_03170 IPR030869 HCD_03170 HCD_03195 IPR025065 Protein of unknown function DUF4006 HCD_03200 IPR004678 Cytochrome c oxidase cbb3-type, subunit III HCD_03200 IPR009056 Cytochrome c-like domain HCD_03200 IPR032858 HCD_03200 HCD_03200 IPR036909 HCD_03200 HCD_03200 IPR038414 HCD_03200 HCD_03205 IPR008621 Cbb3-type cytochrome oxidase component HCD_03205 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ HCD_03210 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO HCD_03210 IPR036909 HCD_03210 HCD_03215 IPR000883 Cytochrome c oxidase subunit I HCD_03215 IPR004677 Cytochrome c oxidase cbb3-type, subunit I HCD_03215 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site HCD_03215 IPR036927 HCD_03215 HCD_03220 IPR001898 Sodium/sulphate symporter HCD_03220 IPR030676 HCD_03220 HCD_03225 IPR000445 Helix-hairpin-helix motif HCD_03225 IPR003265 HhH-GPD domain HCD_03225 IPR011257 DNA glycosylase HCD_03225 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal HCD_03235 IPR003804 L-lactate permease HCD_03240 IPR003804 L-lactate permease HCD_03245 IPR004017 Cysteine-rich domain HCD_03250 IPR003741 Domain of unknown function DUF162 HCD_03250 IPR004452 4Fe-4S binding protein HCD_03250 IPR009051 Alpha-helical ferredoxin HCD_03250 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_03250 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_03250 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain HCD_03250 IPR024569 4Fe-4S binding protein, C-terminal HCD_03250 IPR037171 HCD_03250 HCD_03255 IPR003741 Domain of unknown function DUF162 HCD_03255 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain HCD_03255 IPR037171 HCD_03255 HCD_03260 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant HCD_03260 IPR036249 HCD_03260 HCD_03275 IPR006597 Sel1-like HCD_03275 IPR011990 Tetratricopeptide-like helical domain HCD_03295 IPR003697 Maf-like protein HCD_03295 IPR029001 Inosine triphosphate pyrophosphatase-like HCD_03300 IPR002318 Alanine-tRNA ligase, class IIc HCD_03300 IPR003156 DHHA1 domain HCD_03300 IPR009000 Translation protein, beta-barrel domain HCD_03300 IPR012947 Threonyl/alanyl tRNA synthetase, SAD HCD_03300 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain HCD_03300 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain HCD_03300 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal HCD_03300 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria HCD_03305 IPR007420 Protein of unknown function DUF465 HCD_03330 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain HCD_03330 IPR006274 Carbamoyl-phosphate synthase, small subunit HCD_03330 IPR017926 Glutamine amidotransferase HCD_03330 IPR029062 Class I glutamine amidotransferase-like HCD_03330 IPR036480 HCD_03330 HCD_03335 IPR007463 Protein of unknown function DUF507 HCD_03340 IPR038731 HCD_03340 HCD_03345 IPR000620 Drug/metabolite transporter HCD_03360 IPR009488 Protein of unknown function DUF1104 HCD_03365 IPR002718 Outer membrane protein, Helicobacter HCD_03370 IPR005813 Ribosomal protein L20 HCD_03370 IPR035566 HCD_03370 HCD_03375 IPR001706 Ribosomal protein L35, non-mitochondrial HCD_03375 IPR018265 Ribosomal protein L35, conserved site HCD_03375 IPR021137 Ribosomal protein L35 HCD_03375 IPR037229 HCD_03375 HCD_03380 IPR001288 Translation initiation factor 3 HCD_03380 IPR019813 Translation initiation factor 3, conserved site HCD_03380 IPR019814 Translation initiation factor 3, N-terminal HCD_03380 IPR019815 Translation initiation factor 3, C-terminal HCD_03380 IPR036787 HCD_03380 HCD_03380 IPR036788 HCD_03380 HCD_03385 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain HCD_03385 IPR002320 Threonine-tRNA ligase, class IIa HCD_03385 IPR004154 Anticodon-binding HCD_03385 IPR012947 Threonyl/alanyl tRNA synthetase, SAD HCD_03385 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain HCD_03385 IPR036621 HCD_03385 HCD_03390 IPR000121 PEP-utilising enzyme, C-terminal HCD_03390 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding HCD_03390 IPR006319 Phosphoenolpyruvate synthase HCD_03390 IPR008279 PEP-utilising enzyme, mobile domain HCD_03390 IPR013815 ATP-grasp fold, subdomain 1 HCD_03390 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain HCD_03390 IPR018274 PEP-utilising enzyme, active site HCD_03390 IPR023151 PEP-utilising enzyme, conserved site HCD_03390 IPR036637 HCD_03390 HCD_03400 IPR032811 HCD_03400 HCD_03405 IPR002718 Outer membrane protein, Helicobacter HCD_03410 IPR001173 Glycosyltransferase 2-like HCD_03410 IPR029044 Nucleotide-diphospho-sugar transferases HCD_03415 IPR003660 HAMP linker domain HCD_03415 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_03415 IPR004090 Chemotaxis methyl-accepting receptor HCD_03415 IPR033480 HCD_03415 HCD_03420 IPR012725 Chaperone DnaK HCD_03420 IPR013126 Heat shock protein 70 family HCD_03420 IPR018181 Heat shock protein 70, conserved site HCD_03420 IPR029047 Heat shock protein 70kD, peptide-binding domain HCD_03420 IPR029048 Heat shock protein 70kD, C-terminal domain HCD_03425 IPR000740 GrpE nucleotide exchange factor HCD_03425 IPR009012 GrpE nucleotide exchange factor, head HCD_03425 IPR013805 GrpE nucleotide exchange factor, coiled-coil HCD_03430 IPR036388 HCD_03430 HCD_03430 IPR036390 HCD_03430 HCD_03435 IPR001303 Class II aldolase/adducin N-terminal HCD_03435 IPR036409 HCD_03435 HCD_03445 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like HCD_03450 IPR001029 Flagellin, D0/D1 domain HCD_03450 IPR001492 Flagellin HCD_03450 IPR010810 Flagellin hook, IN motif HCD_03455 IPR003601 DNA topoisomerase, type IA, domain 2 HCD_03455 IPR003602 DNA topoisomerase, type IA, DNA-binding domain HCD_03455 IPR005733 DNA topoisomerase I, bacterial-type HCD_03455 IPR006171 Toprim domain HCD_03455 IPR013497 DNA topoisomerase, type IA, central HCD_03455 IPR013498 DNA topoisomerase, type IA, zn finger HCD_03455 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 HCD_03455 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 HCD_03455 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 HCD_03455 IPR023405 DNA topoisomerase, type IA, core domain HCD_03455 IPR023406 DNA topoisomerase, type IA, active site HCD_03455 IPR028612 DNA topoisomerase I, type IA HCD_03460 IPR007197 Radical SAM HCD_03460 IPR013785 Aldolase-type TIM barrel HCD_03465 IPR002718 Outer membrane protein, Helicobacter HCD_03470 IPR002718 Outer membrane protein, Helicobacter HCD_03475 IPR003828 Protein of unknown function DUF208 HCD_03480 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_03485 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site HCD_03485 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HCD_03485 IPR004450 Threonine synthase-like HCD_03485 IPR036052 HCD_03485 HCD_03485 IPR037158 HCD_03485 HCD_03495 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCD_03495 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain HCD_03495 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site HCD_03495 IPR036291 HCD_03495 HCD_03505 IPR001227 Acyl transferase domain HCD_03505 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type HCD_03505 IPR014043 Acyl transferase HCD_03505 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase HCD_03505 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding HCD_03505 IPR020801 Polyketide synthase, acyl transferase domain HCD_03505 IPR024925 Malonyl CoA-acyl carrier protein transacylase HCD_03510 IPR000845 Nucleoside phosphorylase domain HCD_03510 IPR010049 MTA/SAH nucleosidase HCD_03510 IPR035994 HCD_03510 HCD_03515 IPR000943 RNA polymerase sigma-70 HCD_03515 IPR007624 RNA polymerase sigma-70 region 3 HCD_03515 IPR007627 RNA polymerase sigma-70 region 2 HCD_03515 IPR007630 RNA polymerase sigma-70 region 4 HCD_03515 IPR009042 RNA polymerase sigma-70 region 1.2 HCD_03515 IPR012760 RNA polymerase sigma factor RpoD, C-terminal HCD_03515 IPR013324 RNA polymerase sigma factor, region 3/4 HCD_03515 IPR013325 RNA polymerase sigma factor, region 2 HCD_03515 IPR014284 RNA polymerase sigma-70 like domain HCD_03515 IPR028630 RNA polymerase sigma factor RpoD HCD_03515 IPR036388 HCD_03515 HCD_03520 IPR000064 Endopeptidase, NLPC/P60 domain HCD_03520 IPR025606 NLPC/P60, N-terminal domain HCD_03520 IPR026864 SH3b2-type SH3 domain HCD_03520 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type HCD_03520 IPR038765 HCD_03520 HCD_03520 IPR039439 HCD_03520 HCD_03525 IPR006231 Malate:quinone-oxidoreductase HCD_03525 IPR036188 HCD_03525 HCD_03530 IPR035366 HCD_03530 HCD_03535 IPR005822 Ribosomal protein L13 HCD_03535 IPR005823 Ribosomal protein L13, bacterial-type HCD_03535 IPR023563 Ribosomal protein L13, conserved site HCD_03535 IPR036899 HCD_03535 HCD_03540 IPR000754 Ribosomal protein S9 HCD_03540 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_03540 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_03540 IPR020574 Ribosomal protein S9, conserved site HCD_03540 IPR023035 Ribosomal protein S9, bacterial/plastid HCD_03545 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_03560 IPR000352 Peptide chain release factor class I/class II HCD_03560 IPR004373 Peptide chain release factor 1 HCD_03560 IPR005139 Peptide chain release factor HCD_03565 IPR002583 Ribosomal protein S20 HCD_03565 IPR036510 HCD_03565 HCD_03570 IPR005841 Alpha-D-phosphohexomutase superfamily HCD_03570 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I HCD_03570 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II HCD_03570 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III HCD_03570 IPR006352 Phosphoglucosamine mutase HCD_03570 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III HCD_03570 IPR016066 Alpha-D-phosphohexomutase, conserved site HCD_03570 IPR036900 HCD_03570 HCD_03575 IPR001872 Peptidase A8, signal peptidase II HCD_03580 IPR002019 Urease, beta subunit HCD_03580 IPR002026 Urease, gamma/gamma-beta subunit HCD_03580 IPR008223 Urease, gamma-beta subunit HCD_03580 IPR036461 HCD_03580 HCD_03580 IPR036463 HCD_03580 HCD_03585 IPR005848 Urease, alpha subunit HCD_03585 IPR006680 Amidohydrolase 1 HCD_03585 IPR011059 Metal-dependent hydrolase, composite domain HCD_03585 IPR011612 Urease alpha-subunit, N-terminal domain HCD_03585 IPR017950 Urease active site HCD_03585 IPR029754 Urease nickel binding site HCD_03585 IPR032466 HCD_03585 HCD_03590 IPR003211 AmiS/UreI transporter HCD_03590 IPR038523 HCD_03590 HCD_03595 IPR004029 UreE urease accessory, N-terminal HCD_03595 IPR007864 Urease accessory protein UreE, C-terminal domain HCD_03595 IPR012406 Urease accessory protein UreE HCD_03595 IPR036118 HCD_03595 HCD_03595 IPR036675 HCD_03595 HCD_03600 IPR002639 Urease accessory protein UreF HCD_03600 IPR038277 HCD_03600 HCD_03605 IPR003495 CobW/HypB/UreG domain HCD_03605 IPR004400 Urease accessory protein UreG HCD_03605 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase HCD_03605 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03610 IPR002669 Urease accessory protein UreD HCD_03620 IPR005126 NapC/NirT cytochrome c, N-terminal HCD_03620 IPR024717 Denitrification system component NapC/NirT/NrfH HCD_03620 IPR036280 HCD_03620 HCD_03620 IPR038266 HCD_03620 HCD_03625 IPR023155 Cytochrome c-552/4 HCD_03625 IPR036280 HCD_03625 HCD_03630 IPR002872 Proline dehydrogenase domain HCD_03630 IPR015590 Aldehyde dehydrogenase domain HCD_03630 IPR016160 Aldehyde dehydrogenase, cysteine active site HCD_03630 IPR016161 Aldehyde/histidinol dehydrogenase HCD_03630 IPR016162 Aldehyde dehydrogenase, N-terminal HCD_03630 IPR016163 Aldehyde dehydrogenase, C-terminal HCD_03630 IPR025703 Bifunctional protein PutA HCD_03630 IPR029041 FAD-linked oxidoreductase-like HCD_03630 IPR029510 Aldehyde dehydrogenase, glutamic acid active site HCD_03635 IPR001734 Sodium/solute symporter HCD_03635 IPR011851 Sodium/proline symporter HCD_03635 IPR038377 HCD_03635 HCD_03640 IPR001525 C-5 cytosine methyltransferase HCD_03640 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_03640 IPR011639 Restriction modification methylase Eco57I HCD_03640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_03655 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA HCD_03655 IPR037539 HCD_03655 HCD_03660 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ HCD_03660 IPR013785 Aldolase-type TIM barrel HCD_03660 IPR036130 HCD_03660 HCD_03665 IPR000715 Glycosyl transferase, family 4 HCD_03670 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HCD_03670 IPR036938 HCD_03670 HCD_03685 IPR002718 Outer membrane protein, Helicobacter HCD_03690 IPR000515 MetI-like domain HCD_03690 IPR035906 HCD_03690 HCD_03695 IPR003439 ABC transporter-like HCD_03695 IPR003593 AAA+ ATPase domain HCD_03695 IPR017871 ABC transporter, conserved site HCD_03695 IPR018449 NIL domain HCD_03695 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03700 IPR004683 Type III secretion system substrate exporter FlhB-like HCD_03700 IPR006135 Type III secretion system substrate exporter HCD_03700 IPR029025 Type III secretion system substrate exporter, C-terminal HCD_03705 IPR001783 Lumazine-binding protein HCD_03705 IPR017938 Riboflavin synthase-like beta-barrel HCD_03705 IPR023366 ATP synthase subunit alpha-like domain HCD_03705 IPR026017 Lumazine-binding domain HCD_03710 IPR001130 TatD family HCD_03710 IPR015991 Uncharacterised deoxyribonuclease TatD-type HCD_03710 IPR018228 Deoxyribonuclease, TatD-related, conserved site HCD_03710 IPR032466 HCD_03710 HCD_03715 IPR008258 Lytic transglycosylase-like SLT domain HCD_03715 IPR018392 LysM domain HCD_03715 IPR023346 Lysozyme-like domain HCD_03715 IPR036779 HCD_03715 HCD_03720 IPR007730 Sporulation-related domain HCD_03720 IPR009009 RlpA-like double-psi beta-barrel domain HCD_03720 IPR012997 Rare lipoprotein A, bacterial HCD_03720 IPR034718 HCD_03720 HCD_03720 IPR036680 HCD_03720 HCD_03720 IPR036908 HCD_03720 HCD_03725 IPR006549 HAD-superfamily hydrolase,subfamily IIIA HCD_03725 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase HCD_03725 IPR023214 HAD-like domain HCD_03725 IPR036412 HCD_03725 HCD_03735 IPR005653 Organic solvent tolerance-like, N-terminal HCD_03735 IPR014340 Lipopolysaccharide assembly, LptA HCD_03740 IPR006073 GTP binding domain HCD_03740 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC HCD_03740 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03750 IPR001460 Penicillin-binding protein, transpeptidase HCD_03750 IPR005311 Penicillin-binding protein, dimerisation domain HCD_03750 IPR012338 Beta-lactamase/transpeptidase-like HCD_03750 IPR017790 Penicillin-binding protein 2 HCD_03750 IPR036138 HCD_03750 HCD_03755 IPR004872 Lipoprotein NlpA family HCD_03760 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant HCD_03760 IPR019479 Peroxiredoxin, C-terminal HCD_03760 IPR024706 Peroxiredoxin, AhpC-type HCD_03760 IPR036249 HCD_03760 HCD_03765 IPR002491 ABC transporter periplasmic binding domain HCD_03770 IPR001182 Cell cycle protein FtsW/RodA HCD_03770 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site HCD_03775 IPR001444 Flagellar basal body rod protein, N-terminal HCD_03775 IPR006300 Flagellar basal-body rod protein FlgB HCD_03775 IPR019776 Flagellar basal body rod protein, conserved site HCD_03780 IPR001444 Flagellar basal body rod protein, N-terminal HCD_03780 IPR006299 Flagellar basal-body rod protein FlgC HCD_03780 IPR010930 Flagellar basal-body/hook protein, C-terminal domain HCD_03780 IPR019776 Flagellar basal body rod protein, conserved site HCD_03785 IPR001624 Flagellar hook-basal body complex protein FliE HCD_03790 IPR001460 Penicillin-binding protein, transpeptidase HCD_03790 IPR005311 Penicillin-binding protein, dimerisation domain HCD_03790 IPR012338 Beta-lactamase/transpeptidase-like HCD_03790 IPR036138 HCD_03790 HCD_03795 IPR007488 Protein of unknown function DUF535 HCD_03795 IPR016024 Armadillo-type fold HCD_03800 IPR003959 ATPase, AAA-type, core HCD_03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03810 IPR022742 Putative lysophospholipase HCD_03810 IPR029058 Alpha/Beta hydrolase fold HCD_03815 IPR002326 Cytochrome c1 HCD_03815 IPR009056 Cytochrome c-like domain HCD_03815 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted HCD_03815 IPR036909 HCD_03815 HCD_03820 IPR005797 Cytochrome b/b6, N-terminal HCD_03820 IPR005798 Cytochrome b/b6, C-terminal HCD_03820 IPR016174 Di-haem cytochrome, transmembrane HCD_03820 IPR027387 Cytochrome b/b6-like domain HCD_03820 IPR036150 HCD_03820 HCD_03825 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit HCD_03825 IPR017941 Rieske [2Fe-2S] iron-sulphur domain HCD_03825 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal HCD_03825 IPR036922 HCD_03825 HCD_03830 IPR001650 Helicase, C-terminal HCD_03830 IPR003711 CarD-like/TRCF domain HCD_03830 IPR004576 Transcription-repair coupling factor HCD_03830 IPR005118 Transcription-repair-coupling factor, C-terminal domain HCD_03830 IPR011545 DEAD/DEAH box helicase domain HCD_03830 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_03830 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03830 IPR036101 HCD_03830 HCD_03830 IPR037235 HCD_03830 HCD_03835 IPR007607 Protein of unknown function DUF583 HCD_03840 IPR011055 Duplicated hybrid motif HCD_03840 IPR016047 Peptidase M23 HCD_03845 IPR011055 Duplicated hybrid motif HCD_03845 IPR016047 Peptidase M23 HCD_03850 IPR001645 Folylpolyglutamate synthetase HCD_03850 IPR013221 Mur ligase, central HCD_03850 IPR018109 Folylpolyglutamate synthetase, conserved site HCD_03850 IPR036565 HCD_03850 HCD_03850 IPR036615 HCD_03850 HCD_03855 IPR007485 Lipopolysaccharide assembly, LptE HCD_03860 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_03860 IPR002300 Aminoacyl-tRNA synthetase, class Ia HCD_03860 IPR002302 Leucine-tRNA ligase HCD_03860 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain HCD_03860 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding HCD_03860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_03860 IPR015413 Methionyl/Leucyl tRNA synthetase HCD_03860 IPR025709 Leucyl-tRNA synthetase, editing domain HCD_03870 IPR005665 Protein-export membrane protein SecF, bacterial HCD_03870 IPR022645 Protein-export membrane protein SecD/SecF, bacterial HCD_03870 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site HCD_03870 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial HCD_03875 IPR001036 Acriflavin resistance protein HCD_03875 IPR005791 Protein translocase subunit SecD HCD_03875 IPR022645 Protein-export membrane protein SecD/SecF, bacterial HCD_03875 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial HCD_03880 IPR003849 Preprotein translocase YajC HCD_03885 IPR004670 Na+/H+ antiporter NhaA HCD_03885 IPR023171 Na/H antiporter domain HCD_03890 IPR014017 DNA helicase, UvrD-like, C-terminal HCD_03890 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_03890 IPR034739 HCD_03890 HCD_03895 IPR001865 Ribosomal protein S2 HCD_03895 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid HCD_03895 IPR018130 Ribosomal protein S2, conserved site HCD_03895 IPR023591 Ribosomal protein S2, flavodoxin-like domain HCD_03900 IPR001816 Translation elongation factor EFTs/EF1B HCD_03900 IPR009060 UBA-like HCD_03900 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation HCD_03900 IPR018101 Translation elongation factor Ts, conserved site HCD_03900 IPR036402 HCD_03900 HCD_03920 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_03920 IPR012263 Adenine modification methylase, M.EcoRV-type HCD_03920 IPR012327 D12 class N6 adenine-specific DNA methyltransferase HCD_03920 IPR023095 Adenine-specific methyltransferase, domain 2 HCD_03920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_03925 IPR001525 C-5 cytosine methyltransferase HCD_03925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_03930 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted HCD_03930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_03935 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_03935 IPR012327 D12 class N6 adenine-specific DNA methyltransferase HCD_03935 IPR023095 Adenine-specific methyltransferase, domain 2 HCD_03935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_03940 IPR000456 Ribosomal protein L17 HCD_03940 IPR036373 HCD_03940 HCD_03945 IPR011260 RNA polymerase, alpha subunit, C-terminal HCD_03945 IPR011262 DNA-directed RNA polymerase, insert domain HCD_03945 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type HCD_03945 IPR011773 DNA-directed RNA polymerase, alpha subunit HCD_03945 IPR036603 HCD_03945 HCD_03945 IPR036643 HCD_03945 HCD_03950 IPR001912 Ribosomal protein S4/S9, N-terminal HCD_03950 IPR002942 RNA-binding S4 domain HCD_03950 IPR005709 Ribosomal protein S4, bacterial-type HCD_03950 IPR018079 Ribosomal protein S4, conserved site HCD_03950 IPR036986 HCD_03950 HCD_03955 IPR001971 Ribosomal protein S11 HCD_03955 IPR018102 Ribosomal S11, conserved site HCD_03955 IPR019981 Ribosomal protein S11, bacterial-type HCD_03955 IPR036967 HCD_03955 HCD_03960 IPR001892 Ribosomal protein S13 HCD_03960 IPR010979 Ribosomal protein S13-like, H2TH HCD_03960 IPR018269 Ribosomal protein S13, conserved site HCD_03960 IPR019980 Ribosomal protein S13, bacterial-type HCD_03960 IPR027437 30s ribosomal protein S13, C-terminal HCD_03965 IPR000473 Ribosomal protein L36 HCD_03965 IPR035977 HCD_03965 HCD_03970 IPR004368 Translation initiation factor IF-1 HCD_03970 IPR006196 RNA-binding domain, S1, IF1 type HCD_03970 IPR012340 Nucleic acid-binding, OB-fold HCD_03970 IPR022967 RNA-binding domain, S1 HCD_03975 IPR000994 Peptidase M24, structural domain HCD_03975 IPR001714 Peptidase M24, methionine aminopeptidase HCD_03975 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 HCD_03975 IPR036005 HCD_03975 HCD_03980 IPR002208 SecY/SEC61-alpha family HCD_03980 IPR023201 SecY subunit domain HCD_03980 IPR026593 Protein translocase subunit SecY HCD_03980 IPR030659 HCD_03980 HCD_03985 IPR005749 Ribosomal protein L15, bacterial-type HCD_03985 IPR021131 Ribosomal protein L18e/L15P HCD_03985 IPR030878 HCD_03985 HCD_03985 IPR036227 HCD_03985 HCD_03990 IPR005324 Ribosomal protein S5, C-terminal HCD_03990 IPR005712 Ribosomal protein S5, bacterial-type HCD_03990 IPR013810 Ribosomal protein S5, N-terminal HCD_03990 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_03990 IPR018192 Ribosomal protein S5, N-terminal, conserved site HCD_03990 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_03995 IPR004389 Ribosomal protein L18, bacterial-type HCD_03995 IPR005484 Ribosomal protein L18/L5 HCD_04000 IPR000702 Ribosomal protein L6 HCD_04000 IPR002358 Ribosomal protein L6, conserved site HCD_04000 IPR019906 Ribosomal protein L6, bacterial-type HCD_04000 IPR020040 Ribosomal protein L6, alpha-beta domain HCD_04000 IPR036789 HCD_04000 HCD_04005 IPR000630 Ribosomal protein S8 HCD_04005 IPR035987 HCD_04005 HCD_04010 IPR001209 Ribosomal protein S14 HCD_04010 IPR018271 Ribosomal protein S14, conserved site HCD_04010 IPR023053 Ribosomal protein S14, type Z HCD_04015 IPR002132 Ribosomal protein L5 HCD_04015 IPR020929 Ribosomal protein L5, conserved site HCD_04015 IPR020930 Ribosomal protein L5, bacterial-type HCD_04015 IPR022803 Ribosomal protein L5 domain HCD_04015 IPR031309 HCD_04015 HCD_04015 IPR031310 HCD_04015 HCD_04020 IPR003256 Ribosomal protein L24 HCD_04020 IPR005824 KOW HCD_04020 IPR005825 Ribosomal protein L24/L26, conserved site HCD_04020 IPR008991 Translation protein SH3-like domain HCD_04025 IPR000218 Ribosomal protein L14b/L23e HCD_04025 IPR005745 Ribosomal protein L14, bacterial-type HCD_04025 IPR019972 Ribosomal protein L14 conserved site HCD_04025 IPR036853 HCD_04025 HCD_04030 IPR000266 Ribosomal protein S17 HCD_04030 IPR012340 Nucleic acid-binding, OB-fold HCD_04030 IPR019979 Ribosomal protein S17, conserved site HCD_04030 IPR019984 Ribosomal protein S17, bacterial-type HCD_04035 IPR001854 Ribosomal protein L29 HCD_04035 IPR018254 Ribosomal protein L29, conserved site HCD_04035 IPR036049 HCD_04035 HCD_04040 IPR000114 Ribosomal protein L16 HCD_04040 IPR016180 Ribosomal protein L10e/L16 HCD_04040 IPR020798 Ribosomal protein L16, conserved site HCD_04040 IPR036920 HCD_04040 HCD_04045 IPR001351 Ribosomal protein S3, C-terminal HCD_04045 IPR004044 K Homology domain, type 2 HCD_04045 IPR004087 K Homology domain HCD_04045 IPR005704 Ribosomal protein S3, bacterial HCD_04045 IPR009019 K homology domain, prokaryotic type HCD_04045 IPR015946 K homology domain-like, alpha/beta HCD_04045 IPR018280 Ribosomal protein S3, conserved site HCD_04045 IPR036419 HCD_04045 HCD_04050 IPR001063 Ribosomal protein L22/L17 HCD_04050 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type HCD_04050 IPR018260 Ribosomal protein L22/L17, conserved site HCD_04050 IPR036394 HCD_04050 HCD_04055 IPR002222 Ribosomal protein S19/S15 HCD_04055 IPR005732 Ribosomal protein S19, bacterial-type HCD_04055 IPR020934 Ribosomal protein S19 conserved site HCD_04055 IPR023575 Ribosomal protein S19, superfamily HCD_04060 IPR002171 Ribosomal protein L2 HCD_04060 IPR005880 Ribosomal protein L2, bacterial/organellar-type HCD_04060 IPR008991 Translation protein SH3-like domain HCD_04060 IPR012340 Nucleic acid-binding, OB-fold HCD_04060 IPR014722 Ribosomal protein L2 domain 2 HCD_04060 IPR014726 Ribosomal protein L2, domain 3 HCD_04060 IPR022666 Ribosomal Proteins L2, RNA binding domain HCD_04060 IPR022669 Ribosomal protein L2, C-terminal HCD_04060 IPR022671 Ribosomal protein L2, conserved site HCD_04065 IPR012677 Nucleotide-binding, alpha-beta plait HCD_04065 IPR012678 Ribosomal protein L23/L15e core domain HCD_04065 IPR013025 Ribosomal protein L25/L23 HCD_04070 IPR002136 Ribosomal protein L4/L1e HCD_04070 IPR013005 Ribosomal protein L4/L1e, bacterial-type HCD_04070 IPR023574 Ribosomal protein L4 domain HCD_04075 IPR000597 Ribosomal protein L3 HCD_04075 IPR009000 Translation protein, beta-barrel domain HCD_04075 IPR019927 Ribosomal protein L3, bacterial/organelle-type HCD_04080 IPR001848 Ribosomal protein S10 HCD_04080 IPR018268 Ribosomal protein S10, conserved site HCD_04080 IPR027486 Ribosomal protein S10 domain HCD_04080 IPR036838 HCD_04080 HCD_04085 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04095 IPR012337 Ribonuclease H-like domain HCD_04095 IPR022898 Ribonuclease HII HCD_04095 IPR024567 Ribonuclease HII/HIII domain HCD_04095 IPR036397 HCD_04095 HCD_04100 IPR000362 Fumarate lyase family HCD_04100 IPR005677 Fumarate hydratase, class II HCD_04100 IPR008948 L-Aspartase-like HCD_04100 IPR018951 Fumarase C, C-terminal HCD_04100 IPR020557 Fumarate lyase, conserved site HCD_04100 IPR022761 Fumarate lyase, N-terminal HCD_04100 IPR024083 Fumarase/histidase, N-terminal HCD_04105 IPR036866 HCD_04105 HCD_04105 IPR036922 HCD_04105 HCD_04110 IPR032693 HCD_04110 HCD_04115 IPR003423 Outer membrane efflux protein HCD_04120 IPR032317 HCD_04120 HCD_04125 IPR001036 Acriflavin resistance protein HCD_04125 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA HCD_04125 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains HCD_04130 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_04130 IPR003356 DNA methylase, adenine-specific HCD_04130 IPR004546 Restriction endonuclease, type I, HsdM HCD_04130 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain HCD_04130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04130 IPR038333 HCD_04130 HCD_04135 IPR004386 Toxin-antitoxin system, YafQ-like toxin HCD_04135 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family HCD_04135 IPR035093 HCD_04135 HCD_04140 IPR007337 RelB antitoxin/Antitoxin DinJ HCD_04140 IPR013321 Arc-type ribbon-helix-helix HCD_04145 IPR000055 Restriction endonuclease, type I, HsdS HCD_04150 IPR004473 Restriction endonuclease, type I, HsdR HCD_04150 IPR006935 Helicase/UvrB domain HCD_04150 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal HCD_04150 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_04150 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04155 IPR002725 Protein of unknown function DUF45 HCD_04160 IPR001789 Signal transduction response regulator, receiver domain HCD_04160 IPR001867 Signal transduction response regulator, C-terminal HCD_04160 IPR011006 CheY-like superfamily HCD_04160 IPR036388 HCD_04160 HCD_04165 IPR003594 Histidine kinase-like ATPase, C-terminal domain HCD_04165 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain HCD_04165 IPR036097 HCD_04165 HCD_04165 IPR036890 HCD_04165 HCD_04170 IPR000631 YjeF C-terminal domain HCD_04170 IPR004443 YjeF N-terminal domain HCD_04170 IPR017953 Carbohydrate kinase, predicted, conserved site HCD_04170 IPR029056 Ribokinase-like HCD_04170 IPR030677 HCD_04170 HCD_04170 IPR036652 HCD_04170 HCD_04175 IPR000055 Restriction endonuclease, type I, HsdS HCD_04180 IPR007692 DNA helicase, DnaB type HCD_04180 IPR007693 DNA helicase, DnaB-like, N-terminal HCD_04180 IPR007694 DNA helicase, DnaB-like, C-terminal HCD_04180 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal HCD_04180 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04180 IPR036185 HCD_04180 HCD_04185 IPR004477 ComEC/Rec2-related protein HCD_04190 IPR007462 Protein of unknown function DUF502 HCD_04195 IPR000537 UbiA prenyltransferase family HCD_04195 IPR006371 4-hydroxybenzoate polyprenyltransferase-related HCD_04210 IPR003817 Phosphatidylserine decarboxylase-related HCD_04210 IPR033177 HCD_04210 HCD_04215 IPR003473 Quinolinate synthetase A HCD_04215 IPR036094 HCD_04215 HCD_04220 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal HCD_04220 IPR004393 Nicotinate-nucleotide pyrophosphorylase HCD_04220 IPR013785 Aldolase-type TIM barrel HCD_04220 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal HCD_04220 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD HCD_04220 IPR036068 HCD_04220 HCD_04220 IPR037128 HCD_04220 HCD_04230 IPR001091 Restriction/modification DNA-methylase HCD_04230 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_04230 IPR002941 DNA methylase N-4/N-6 HCD_04230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04235 IPR011335 Restriction endonuclease type II-like HCD_04245 IPR001478 PDZ domain HCD_04245 IPR004447 C-terminal-processing peptidase S41A HCD_04245 IPR005151 Tail specific protease HCD_04245 IPR029045 ClpP/crotonase-like domain HCD_04245 IPR036034 HCD_04245 HCD_04255 IPR002123 Phospholipid/glycerol acyltransferase HCD_04255 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase HCD_04260 IPR002043 Uracil-DNA glycosylase HCD_04260 IPR005122 Uracil-DNA glycosylase-like HCD_04260 IPR018085 Uracil-DNA glycosylase, active site HCD_04260 IPR036895 HCD_04260 HCD_04265 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I HCD_04265 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain HCD_04265 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain HCD_04265 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family HCD_04265 IPR036291 HCD_04265 HCD_04270 IPR001576 Phosphoglycerate kinase HCD_04270 IPR015824 Phosphoglycerate kinase, N-terminal HCD_04270 IPR015911 Phosphoglycerate kinase, conserved site HCD_04270 IPR036043 HCD_04270 HCD_04275 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB HCD_04275 IPR004488 Magnesium/cobalt transport protein CorA HCD_04280 IPR005496 Integral membrane protein TerC HCD_04300 IPR003356 DNA methylase, adenine-specific HCD_04300 IPR014883 VRR-NUC domain HCD_04300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04305 IPR029057 Phosphoribosyltransferase-like HCD_04310 IPR018094 Thymidylate kinase HCD_04310 IPR018095 Thymidylate kinase, conserved site HCD_04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04310 IPR039430 HCD_04310 HCD_04315 IPR001980 Coenzyme A biosynthesis protein HCD_04315 IPR004821 Cytidyltransferase-like domain HCD_04315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_04320 IPR003382 Flavoprotein HCD_04320 IPR004507 Decarboxylase UbiX/Pad1 HCD_04320 IPR036551 HCD_04320 HCD_04325 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal HCD_04330 IPR013986 DExx box DNA helicase domain HCD_04330 IPR014017 DNA helicase, UvrD-like, C-terminal HCD_04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04330 IPR034739 HCD_04330 HCD_04335 IPR011990 Tetratricopeptide-like helical domain HCD_04335 IPR019734 Tetratricopeptide repeat HCD_04340 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain HCD_04340 IPR002317 Serine-tRNA ligase, type1 HCD_04340 IPR010978 tRNA-binding arm HCD_04340 IPR015866 Serine-tRNA synthetase, type1, N-terminal HCD_04345 IPR003010 Carbon-nitrogen hydrolase HCD_04345 IPR036526 HCD_04345 HCD_04350 IPR003761 Exonuclease VII, small subunit HCD_04350 IPR037004 HCD_04350 HCD_04355 IPR004033 UbiE/COQ5 methyltransferase HCD_04355 IPR023576 UbiE/COQ5 methyltransferase, conserved site HCD_04355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04360 IPR005265 Uncharacterised protein family UPF0093 HCD_04365 IPR001498 Impact, N-terminal HCD_04365 IPR015796 Impact family, bacterial/archaeal HCD_04365 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_04365 IPR036956 HCD_04365 HCD_04380 IPR032317 HCD_04380 HCD_04385 IPR003423 Outer membrane efflux protein HCD_04390 IPR000644 CBS domain HCD_04390 IPR002550 Domain of unknown function DUF21 HCD_04390 IPR005170 Transporter-associated domain HCD_04390 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 HCD_04390 IPR036318 HCD_04390 HCD_04395 IPR001204 Phosphate transporter HCD_04400 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal HCD_04400 IPR034904 HCD_04400 HCD_04410 IPR004101 Mur ligase, C-terminal HCD_04410 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase HCD_04410 IPR013221 Mur ligase, central HCD_04410 IPR018109 Folylpolyglutamate synthetase, conserved site HCD_04410 IPR036565 HCD_04410 HCD_04410 IPR036615 HCD_04410 HCD_04415 IPR001585 Transaldolase HCD_04415 IPR004732 Transaldolase type 2 HCD_04415 IPR013785 Aldolase-type TIM barrel HCD_04415 IPR018225 Transaldolase, active site HCD_04420 IPR001021 Ribosomal protein L25, long-form HCD_04420 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain HCD_04420 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain HCD_04420 IPR020057 Ribosomal protein L25, beta domain HCD_04420 IPR029751 Ribosomal protein L25 HCD_04420 IPR037121 HCD_04420 HCD_04425 IPR001328 Peptidyl-tRNA hydrolase HCD_04425 IPR018171 Peptidyl-tRNA hydrolase, conserved site HCD_04425 IPR036416 HCD_04425 HCD_04435 IPR005495 Permease YjgP/YjgQ, predicted HCD_04440 IPR007488 Protein of unknown function DUF535 HCD_04445 IPR011455 Protein of unknown function DUF1561 HCD_04450 IPR001525 C-5 cytosine methyltransferase HCD_04450 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_04450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04465 IPR002718 Outer membrane protein, Helicobacter HCD_04470 IPR007418 Protein of unknown function DUF474 HCD_04475 IPR001757 Cation-transporting P-type ATPase HCD_04475 IPR006121 Heavy metal-associated domain, HMA HCD_04475 IPR008250 P-type ATPase, A domain HCD_04475 IPR018303 P-type ATPase, phosphorylation site HCD_04475 IPR021993 Putative metal-binding domain of cation transport ATPase HCD_04475 IPR023214 HAD-like domain HCD_04475 IPR023298 P-type ATPase, transmembrane domain HCD_04475 IPR023299 P-type ATPase, cytoplasmic domain N HCD_04475 IPR027256 Cation-transporting P-type ATPase, subfamily IB HCD_04475 IPR036163 HCD_04475 HCD_04475 IPR036412 HCD_04475 HCD_04480 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_04480 IPR007848 Methyltransferase small domain HCD_04480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04485 IPR002125 CMP/dCMP deaminase, zinc-binding HCD_04485 IPR016193 Cytidine deaminase-like HCD_04485 IPR024072 Dihydrofolate reductase-like domain HCD_04490 IPR004445 Sodium/glutamate symporter HCD_04495 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase HCD_04495 IPR032095 HCD_04495 HCD_04495 IPR036291 HCD_04495 HCD_04500 IPR013783 Immunoglobulin-like fold HCD_04500 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG HCD_04500 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_04500 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_04500 IPR032879 HCD_04500 HCD_04505 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY HCD_04510 IPR006157 Dihydroneopterin aldolase/epimerase domain HCD_04520 IPR000531 TonB-dependent receptor, beta-barrel HCD_04520 IPR012910 TonB-dependent receptor, plug HCD_04520 IPR036942 HCD_04520 HCD_04520 IPR037066 HCD_04520 HCD_04530 IPR004534 L-seryl-tRNA selenium transferase HCD_04530 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_04530 IPR015424 Pyridoxal phosphate-dependent transferase HCD_04530 IPR018319 L-seryl-tRNA selenium transferase-like HCD_04535 IPR009019 K homology domain, prokaryotic type HCD_04535 IPR010213 Transcription termination factor NusA HCD_04535 IPR012340 Nucleic acid-binding, OB-fold HCD_04535 IPR013735 Transcription factor NusA, N-terminal HCD_04535 IPR015946 K homology domain-like, alpha/beta HCD_04535 IPR022967 RNA-binding domain, S1 HCD_04535 IPR025249 KH domain, NusA-like HCD_04535 IPR030842 HCD_04535 HCD_04535 IPR036555 HCD_04535 HCD_04540 IPR001091 Restriction/modification DNA-methylase HCD_04540 IPR002941 DNA methylase N-4/N-6 HCD_04540 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site HCD_04540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04565 IPR006935 Helicase/UvrB domain HCD_04565 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_04570 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class HCD_04570 IPR002941 DNA methylase N-4/N-6 HCD_04570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04575 IPR001650 Helicase, C-terminal HCD_04575 IPR006935 Helicase/UvrB domain HCD_04575 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_04575 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04585 IPR002718 Outer membrane protein, Helicobacter HCD_04590 IPR004808 AP endonuclease 1 HCD_04590 IPR005135 Endonuclease/exonuclease/phosphatase HCD_04590 IPR020847 AP endonuclease 1, binding site HCD_04590 IPR020848 AP endonuclease 1, conserved site HCD_04590 IPR036691 HCD_04590 HCD_04605 IPR001957 Chromosomal replication control, initiator DnaA HCD_04605 IPR003593 AAA+ ATPase domain HCD_04605 IPR010921 Trp repressor/replication initiator HCD_04605 IPR013159 Chromosomal replication initiator, DnaA C-terminal HCD_04605 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) HCD_04605 IPR018312 Chromosomal replication control, initiator DnaA, conserved site HCD_04605 IPR020591 Chromosomal replication control, initiator DnaA-like HCD_04605 IPR024633 DnaA N-terminal domain HCD_04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04605 IPR038454 HCD_04605 HCD_04615 IPR035994 HCD_04615 HCD_04620 IPR019469 Protein of unknown function DUF2443 HCD_04620 IPR038018 HCD_04620 HCD_04625 IPR001347 Sugar isomerase (SIS) HCD_04625 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising HCD_04625 IPR029055 Nucleophile aminohydrolases, N-terminal HCD_04635 IPR014017 DNA helicase, UvrD-like, C-terminal HCD_04635 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04640 IPR003669 Thymidylate synthase ThyX HCD_04640 IPR036098 HCD_04640 HCD_04650 IPR015032 MTH538 TIR-like domain HCD_04650 IPR035897 HCD_04650 HCD_04650 IPR036490 HCD_04650 HCD_04655 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_04655 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class HCD_04655 IPR002941 DNA methylase N-4/N-6 HCD_04655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04660 IPR006935 Helicase/UvrB domain HCD_04660 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04665 IPR001098 DNA-directed DNA polymerase, family A, palm domain HCD_04665 IPR002298 DNA polymerase A HCD_04665 IPR002421 5'-3' exonuclease, N-terminal HCD_04665 IPR002562 3'-5' exonuclease domain HCD_04665 IPR008918 Helix-hairpin-helix motif, class 2 HCD_04665 IPR012337 Ribonuclease H-like domain HCD_04665 IPR018320 DNA polymerase 1 HCD_04665 IPR019760 DNA-directed DNA polymerase, family A, conserved site HCD_04665 IPR020045 5'-3' exonuclease, C-terminal domain HCD_04665 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal HCD_04665 IPR029060 PIN domain-like HCD_04665 IPR036279 HCD_04665 HCD_04665 IPR036397 HCD_04665 HCD_04670 IPR002718 Outer membrane protein, Helicobacter HCD_04675 IPR001544 Aminotransferase, class IV HCD_04675 IPR005786 Branched-chain amino acid aminotransferase II HCD_04675 IPR018300 Aminotransferase, class IV, conserved site HCD_04675 IPR036038 HCD_04675 HCD_04690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04700 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase HCD_04700 IPR023079 Sedoheptulose-1,7-bisphosphatase HCD_04700 IPR033391 HCD_04700 HCD_04705 IPR000056 Ribulose-phosphate 3-epimerase-like HCD_04705 IPR011060 Ribulose-phosphate binding barrel HCD_04705 IPR013785 Aldolase-type TIM barrel HCD_04705 IPR026019 Ribulose-phosphate 3-epimerase HCD_04710 IPR006054 DNA polymerase III, epsilon subunit HCD_04710 IPR012337 Ribonuclease H-like domain HCD_04710 IPR013520 Exonuclease, RNase T/DNA polymerase III HCD_04710 IPR036397 HCD_04710 HCD_04720 IPR008532 Domain of unknown function DUF814 HCD_04725 IPR004604 DNA recombination/repair protein RecN HCD_04725 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04730 IPR002504 Inorganic polyphosphate/ATP-NAD kinase HCD_04730 IPR016064 ATP-NAD kinase-like domain HCD_04730 IPR017437 ATP-NAD kinase, PpnK-type, all-beta HCD_04730 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 HCD_04735 IPR002718 Outer membrane protein, Helicobacter HCD_04740 IPR004919 Domain of unknown function DUF262 HCD_04740 IPR011089 Domain of unknown function DUF1524 HCD_04745 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_04745 IPR029151 Periplasmic sensor domain-like HCD_04745 IPR033479 HCD_04745 HCD_04750 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site HCD_04750 IPR011032 GroES (chaperonin 10)-like HCD_04750 IPR013149 Alcohol dehydrogenase, C-terminal HCD_04750 IPR013154 Alcohol dehydrogenase GroES-like HCD_04750 IPR020843 Polyketide synthase, enoylreductase HCD_04750 IPR036291 HCD_04750 HCD_04755 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain HCD_04755 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal HCD_04755 IPR036291 HCD_04755 HCD_04760 IPR002293 Amino acid/polyamine transporter I HCD_04760 IPR004840 Amino acid permease, conserved site HCD_04760 IPR004841 Amino acid permease/ SLC12A domain HCD_04765 IPR006035 Ureohydrolase HCD_04765 IPR014033 Arginase HCD_04765 IPR023696 Ureohydrolase domain HCD_04770 IPR002718 Outer membrane protein, Helicobacter HCD_04775 IPR001891 Malic oxidoreductase HCD_04775 IPR012301 Malic enzyme, N-terminal domain HCD_04775 IPR012302 Malic enzyme, NAD-binding HCD_04775 IPR036291 HCD_04775 HCD_04775 IPR037062 HCD_04775 HCD_04780 IPR006935 Helicase/UvrB domain HCD_04780 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal HCD_04780 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_04780 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04785 IPR000055 Restriction endonuclease, type I, HsdS HCD_04790 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_04790 IPR003356 DNA methylase, adenine-specific HCD_04790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_04795 IPR003099 Prephenate dehydrogenase HCD_04795 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like HCD_04795 IPR036291 HCD_04795 HCD_04800 IPR003111 Peptidase S16, lon N-terminal HCD_04800 IPR003593 AAA+ ATPase domain HCD_04800 IPR003959 ATPase, AAA-type, core HCD_04800 IPR004815 Lon protease, bacterial/eukaryotic-type HCD_04800 IPR008268 Peptidase S16, active site HCD_04800 IPR008269 Peptidase S16, Lon C-terminal HCD_04800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_04800 IPR015947 PUA-like domain HCD_04800 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04800 IPR027543 Lon protease, bacterial HCD_04805 IPR011990 Tetratricopeptide-like helical domain HCD_04805 IPR017689 Outer membrane protein assembly factor BamD HCD_04805 IPR039565 HCD_04805 HCD_04810 IPR003775 Flagellar assembly factor FliW HCD_04810 IPR024046 Flagellar assembly factor FliW domain HCD_04815 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ HCD_04815 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ HCD_04815 IPR029069 HotDog domain HCD_04820 IPR001451 Bacterial transferase hexapeptide repeat HCD_04820 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase HCD_04820 IPR011004 Trimeric LpxA-like HCD_04820 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal HCD_04820 IPR037157 HCD_04820 HCD_04825 IPR003593 AAA+ ATPase domain HCD_04825 IPR003959 ATPase, AAA-type, core HCD_04825 IPR004487 Clp protease, ATP-binding subunit ClpX HCD_04825 IPR010603 Zinc finger, ClpX C4-type HCD_04825 IPR019489 Clp ATPase, C-terminal HCD_04825 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04830 IPR004753 Cell shape determining protein MreB/Mrl HCD_04835 IPR007221 Rod shape-determining protein MreC HCD_04850 IPR008407 Branched-chain amino acid transport, AzlD HCD_04855 IPR004471 Branched-chain amino acid transport, AzlC HCD_04855 IPR011606 Branched-chain amino acid transport, permease HCD_04860 IPR001305 Heat shock protein DnaJ, cysteine-rich domain HCD_04860 IPR001623 DnaJ domain HCD_04860 IPR002939 Chaperone DnaJ, C-terminal HCD_04860 IPR008971 HSP40/DnaJ peptide-binding HCD_04860 IPR012724 Chaperone DnaJ HCD_04860 IPR036410 HCD_04860 HCD_04860 IPR036869 HCD_04860 HCD_04870 IPR004506 tRNA-specific 2-thiouridylase HCD_04870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_04870 IPR023382 Adenine nucleotide alpha hydrolase-like domains HCD_04875 IPR001623 DnaJ domain HCD_04875 IPR036869 HCD_04875 HCD_04880 IPR004821 Cytidyltransferase-like domain HCD_04880 IPR005248 Probable nicotinate-nucleotide adenylyltransferase HCD_04880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_04885 IPR002145 Ribbon-helix-helix protein, copG HCD_04885 IPR010985 Ribbon-helix-helix HCD_04885 IPR013321 Arc-type ribbon-helix-helix HCD_04885 IPR014864 Transcription factor, NikR, nickel binding C-terminal HCD_04885 IPR022988 Nickel-responsive transcriptional regulator NikR HCD_04885 IPR027271 HCD_04885 HCD_04890 IPR002898 MotA/TolQ/ExbB proton channel HCD_04890 IPR014172 TonB-system energizer ExbB type-2 HCD_04895 IPR003400 Biopolymer transport protein ExbD/TolR HCD_04895 IPR014171 TonB system transport protein ExbD type-2 HCD_04900 IPR003538 Gram-negative bacterial TonB protein HCD_04900 IPR006260 TonB, C-terminal HCD_04900 IPR037682 HCD_04900 HCD_04920 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB HCD_04920 IPR006638 Elongator protein 3/MiaB/NifB HCD_04920 IPR007197 Radical SAM HCD_04920 IPR010722 Biotin and thiamin synthesis-associated domain HCD_04920 IPR013785 Aldolase-type TIM barrel HCD_04920 IPR024177 Biotin synthase HCD_04925 IPR017039 Virulence factor BrkB HCD_04930 IPR002718 Outer membrane protein, Helicobacter HCD_04935 IPR003453 Permease domain HCD_04935 IPR030802 HCD_04935 HCD_04935 IPR036513 HCD_04935 HCD_04940 IPR003439 ABC transporter-like HCD_04940 IPR003593 AAA+ ATPase domain HCD_04940 IPR017871 ABC transporter, conserved site HCD_04940 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_04945 IPR003399 Mammalian cell entry-related HCD_04955 IPR005184 Domain of unknown function DUF306, Meta/HslJ HCD_04955 IPR038670 HCD_04955 HCD_04960 IPR007488 Protein of unknown function DUF535 HCD_04965 IPR004852 Di-haem cytochrome c peroxidase HCD_04965 IPR009056 Cytochrome c-like domain HCD_04965 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase HCD_04965 IPR036909 HCD_04965 HCD_04970 IPR003141 Polymerase/histidinol phosphatase, N-terminal HCD_04970 IPR004013 PHP, C-terminal HCD_04970 IPR004805 DNA polymerase III, alpha subunit HCD_04970 IPR011708 Bacterial DNA polymerase III, alpha subunit HCD_04970 IPR016195 Polymerase/histidinol phosphatase-like HCD_04970 IPR029460 DNA polymerase, helix-hairpin-helix motif HCD_04975 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F HCD_04975 IPR002942 RNA-binding S4 domain HCD_04975 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F HCD_04975 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site HCD_04975 IPR020103 Pseudouridine synthase, catalytic domain HCD_04975 IPR036986 HCD_04975 HCD_04980 IPR021907 Protein of unknown function DUF3519 HCD_05025 IPR025267 Protein of unknown function DUF4043 HCD_05050 IPR009241 Addiction module killer protein HCD_05050 IPR014056 Addiction module killer protein, predicted HCD_05055 IPR010982 Lambda repressor-like, DNA-binding domain HCD_05055 IPR014057 Addiction module antidote protein, HI1420 HCD_05060 IPR009057 Homeodomain-like HCD_05070 IPR001712 Type III secretion system FHIPEP HCD_05070 IPR006301 Flagellar biosynthesis protein FlhA HCD_05070 IPR025505 FHIPEP conserved site HCD_05075 IPR038763 HCD_05075 HCD_05080 IPR001789 Signal transduction response regulator, receiver domain HCD_05080 IPR001867 Signal transduction response regulator, C-terminal HCD_05080 IPR011006 CheY-like superfamily HCD_05080 IPR016032 Signal transduction response regulator, C-terminal effector HCD_05080 IPR036388 HCD_05080 HCD_05085 IPR004843 Calcineurin-like phosphoesterase domain, apaH type HCD_05085 IPR029052 Metallo-dependent phosphatase-like HCD_05090 IPR018573 Restriction endonuclease, type II, AlwI HCD_05095 IPR010443 Restriction endonuclease, type II, Tsp45I HCD_05100 IPR002104 Integrase, catalytic HCD_05100 IPR011010 DNA breaking-rejoining enzyme, catalytic core HCD_05100 IPR013762 Integrase-like, catalytic core HCD_05105 IPR002686 Transposase IS200-like HCD_05105 IPR036515 HCD_05105 HCD_05110 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_05110 IPR010095 Transposase IS605, OrfB, C-terminal HCD_05110 IPR021027 Transposase, putative, helix-turn-helix domain HCD_05115 IPR036597 HCD_05115 HCD_05125 IPR001789 Signal transduction response regulator, receiver domain HCD_05125 IPR002078 RNA polymerase sigma factor 54 interaction domain HCD_05125 IPR003593 AAA+ ATPase domain HCD_05125 IPR011006 CheY-like superfamily HCD_05125 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 HCD_05125 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 HCD_05125 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05135 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal HCD_05135 IPR005743 DNA gyrase, subunit A HCD_05135 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel HCD_05135 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain HCD_05135 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta HCD_05135 IPR013760 DNA topoisomerase, type IIA-like domain HCD_05135 IPR035516 HCD_05135 HCD_05140 IPR000829 Diacylglycerol kinase, prokaryotic HCD_05140 IPR036945 HCD_05140 HCD_05150 IPR018707 Protein of unknown function DUF2219 HCD_05150 IPR037107 HCD_05150 HCD_05155 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_05155 IPR010095 Transposase IS605, OrfB, C-terminal HCD_05155 IPR021027 Transposase, putative, helix-turn-helix domain HCD_05160 IPR002686 Transposase IS200-like HCD_05160 IPR036515 HCD_05160 HCD_05165 IPR019064 Type-2 restriction enzyme NlaIV HCD_05170 IPR001525 C-5 cytosine methyltransferase HCD_05170 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_05170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_05175 IPR012337 Ribonuclease H-like domain HCD_05175 IPR019288 Predicted 3'-5' exonuclease, PolB-like HCD_05175 IPR036397 HCD_05175 HCD_05180 IPR003373 Ferrous iron transport protein B HCD_05180 IPR005225 Small GTP-binding protein domain HCD_05180 IPR011640 Ferrous iron transport protein B, C-terminal HCD_05180 IPR011642 Nucleoside recognition Gate HCD_05180 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05180 IPR030389 HCD_05180 HCD_05185 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_05185 IPR010095 Transposase IS605, OrfB, C-terminal HCD_05185 IPR021027 Transposase, putative, helix-turn-helix domain HCD_05190 IPR002686 Transposase IS200-like HCD_05190 IPR036515 HCD_05190 HCD_05195 IPR002495 Glycosyl transferase, family 8 HCD_05195 IPR029044 Nucleotide-diphospho-sugar transferases HCD_05205 IPR005837 Flagellar transport protein FliP HCD_05205 IPR005838 Type III secretion system inner membrane P protein HCD_05210 IPR001451 Bacterial transferase hexapeptide repeat HCD_05210 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase HCD_05210 IPR011004 Trimeric LpxA-like HCD_05210 IPR025877 MobA-like NTP transferase domain HCD_05210 IPR029044 Nucleotide-diphospho-sugar transferases HCD_05215 IPR000788 Ribonucleotide reductase large subunit, C-terminal HCD_05215 IPR005144 ATP-cone HCD_05215 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal HCD_05215 IPR013346 Ribonucleotide reductase, class I , alpha subunit HCD_05215 IPR013509 Ribonucleotide reductase large subunit, N-terminal HCD_05220 IPR000683 Oxidoreductase, N-terminal HCD_05220 IPR004104 Oxidoreductase, C-terminal HCD_05220 IPR036291 HCD_05220 HCD_05225 IPR002781 Transmembrane protein TauE like HCD_05230 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site HCD_05230 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain HCD_05230 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding HCD_05230 IPR036217 HCD_05230 HCD_05230 IPR036388 HCD_05230 HCD_05230 IPR036631 HCD_05230 HCD_05235 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_05235 IPR003356 DNA methylase, adenine-specific HCD_05235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_05240 IPR002104 Integrase, catalytic HCD_05240 IPR011010 DNA breaking-rejoining enzyme, catalytic core HCD_05240 IPR013762 Integrase-like, catalytic core HCD_05240 IPR033683 HCD_05240 HCD_05245 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site HCD_05245 IPR004839 Aminotransferase, class I/classII HCD_05245 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_05245 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_05245 IPR015424 Pyridoxal phosphate-dependent transferase HCD_05250 IPR002718 Outer membrane protein, Helicobacter HCD_05255 IPR004017 Cysteine-rich domain HCD_05255 IPR009051 Alpha-helical ferredoxin HCD_05255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_05255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_05260 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN HCD_05260 IPR006638 Elongator protein 3/MiaB/NifB HCD_05260 IPR007197 Radical SAM HCD_05260 IPR010723 HemN, C-terminal domain HCD_05260 IPR023404 Radical SAM, alpha/beta horseshoe HCD_05265 IPR019724 Uncharacterised protein family UPF0763 HCD_05270 IPR000453 Chorismate synthase HCD_05270 IPR020541 Chorismate synthase, conserved site HCD_05270 IPR035904 HCD_05270 HCD_05275 IPR000999 Ribonuclease III domain HCD_05275 IPR011907 Ribonuclease III HCD_05275 IPR014720 Double-stranded RNA-binding domain HCD_05275 IPR036389 HCD_05275 HCD_05280 IPR002156 Ribonuclease H domain HCD_05280 IPR012337 Ribonuclease H-like domain HCD_05280 IPR036397 HCD_05280 HCD_05285 IPR011990 Tetratricopeptide-like helical domain HCD_05290 IPR015391 SurA N-terminal HCD_05290 IPR027304 Trigger factor/SurA domain HCD_05295 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related HCD_05295 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit HCD_05295 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic HCD_05295 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain HCD_05295 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site HCD_05295 IPR018027 Asn/Gln amidotransferase HCD_05295 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal HCD_05300 IPR007863 Peptidase M16, C-terminal domain HCD_05300 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like HCD_05300 IPR011765 Peptidase M16, N-terminal HCD_05305 IPR007197 Radical SAM HCD_05305 IPR013785 Aldolase-type TIM barrel HCD_05305 IPR020050 FO synthase, subunit 2 HCD_05305 IPR022431 Menaquinone biosynthesis, SCO4550 HCD_05310 IPR000184 Bacterial surface antigen (D15) HCD_05310 IPR010827 Surface antigen variable number HCD_05310 IPR023707 Outer membrane protein assembly factor BamA HCD_05315 IPR007197 Radical SAM HCD_05315 IPR013785 Aldolase-type TIM barrel HCD_05315 IPR020050 FO synthase, subunit 2 HCD_05315 IPR022432 Menaquinone biosynthesis, SCO4494, predicted HCD_05330 IPR008162 Inorganic pyrophosphatase HCD_05330 IPR036649 HCD_05330 HCD_05340 IPR002654 Glycosyl transferase, family 25 HCD_05345 IPR002654 Glycosyl transferase, family 25 HCD_05350 IPR002654 Glycosyl transferase, family 25 HCD_05355 IPR000850 Adenylate kinase/UMP-CMP kinase HCD_05355 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05355 IPR033690 HCD_05355 HCD_05360 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb HCD_05360 IPR004115 GAD-like domain HCD_05360 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) HCD_05360 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type HCD_05360 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type HCD_05360 IPR012340 Nucleic acid-binding, OB-fold HCD_05360 IPR029351 GAD domain HCD_05365 IPR001789 Signal transduction response regulator, receiver domain HCD_05365 IPR002545 CheW-like protein HCD_05365 IPR011006 CheY-like superfamily HCD_05365 IPR024181 Chemotaxis response regulator CheV HCD_05365 IPR036061 HCD_05365 HCD_05370 IPR001357 BRCT domain HCD_05370 IPR001679 NAD-dependent DNA ligase HCD_05370 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 HCD_05370 IPR004150 NAD-dependent DNA ligase, OB-fold HCD_05370 IPR010994 RuvA domain 2-like HCD_05370 IPR012340 Nucleic acid-binding, OB-fold HCD_05370 IPR013839 NAD-dependent DNA ligase, adenylation HCD_05370 IPR013840 NAD-dependent DNA ligase, N-terminal HCD_05370 IPR018239 NAD-dependent DNA ligase, active site HCD_05370 IPR033136 HCD_05370 HCD_05370 IPR036420 HCD_05370 HCD_05375 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_05375 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_05380 IPR036411 HCD_05380 HCD_05390 IPR006656 Molybdopterin oxidoreductase HCD_05390 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain HCD_05390 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal HCD_05395 IPR006656 Molybdopterin oxidoreductase HCD_05395 IPR006657 Molydopterin dinucleotide-binding domain HCD_05395 IPR009010 Aspartate decarboxylase-like domain HCD_05400 IPR000813 7Fe ferredoxin HCD_05400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_05400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_05405 IPR006471 Formate dehydrogenase, gamma subunit HCD_05405 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase HCD_05405 IPR016174 Di-haem cytochrome, transmembrane HCD_05420 IPR001537 tRNA/rRNA methyltransferase, SpoU type HCD_05420 IPR004441 RNA methyltransferase TrmH family HCD_05420 IPR013123 RNA 2-O ribose methyltransferase, substrate binding HCD_05420 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HCD_05420 IPR029028 Alpha/beta knot methyltransferases HCD_05420 IPR029064 50S ribosomal protein L30e-like HCD_05425 IPR000878 Tetrapyrrole methylase HCD_05425 IPR008189 rRNA small subunit methyltransferase I HCD_05425 IPR014776 Tetrapyrrole methylase, subdomain 2 HCD_05425 IPR014777 Tetrapyrrole methylase, subdomain 1 HCD_05425 IPR035996 HCD_05425 HCD_05430 IPR002150 Ribosomal protein L31 HCD_05430 IPR027491 Ribosomal protein L31 type A HCD_05430 IPR034704 HCD_05430 HCD_05435 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain HCD_05435 IPR003593 AAA+ ATPase domain HCD_05435 IPR004665 Transcription termination factor Rho HCD_05435 IPR011112 Rho termination factor, N-terminal HCD_05435 IPR011113 Rho termination factor, RNA-binding HCD_05435 IPR011129 Cold shock protein HCD_05435 IPR012340 Nucleic acid-binding, OB-fold HCD_05435 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05435 IPR036269 HCD_05435 HCD_05440 IPR001920 Asp/Glu racemase HCD_05440 IPR004391 Glutamate racemase HCD_05440 IPR015942 Asp/Glu/hydantoin racemase HCD_05440 IPR018187 Asp/Glu racemase, active site HCD_05440 IPR033134 HCD_05440 HCD_05445 IPR005490 L,D-transpeptidase catalytic domain HCD_05445 IPR032710 HCD_05445 HCD_05445 IPR038063 HCD_05445 HCD_05450 IPR004044 K Homology domain, type 2 HCD_05450 IPR005225 Small GTP-binding protein domain HCD_05450 IPR005662 GTP-binding protein Era HCD_05450 IPR006073 GTP binding domain HCD_05450 IPR009019 K homology domain, prokaryotic type HCD_05450 IPR015946 K homology domain-like, alpha/beta HCD_05450 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05455 IPR003593 AAA+ ATPase domain HCD_05455 IPR003959 ATPase, AAA-type, core HCD_05455 IPR004491 Heat shock protein HslU HCD_05455 IPR019489 Clp ATPase, C-terminal HCD_05455 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05460 IPR001353 Proteasome, subunit alpha/beta HCD_05460 IPR022281 ATP-dependent protease, HslV subunit HCD_05460 IPR029055 Nucleophile aminohydrolases, N-terminal HCD_05465 IPR009027 Ribosomal protein L9/RNase H1, N-terminal HCD_05465 IPR020069 Ribosomal protein L9, C-terminal HCD_05465 IPR020070 Ribosomal protein L9, N-terminal HCD_05465 IPR020594 Ribosomal protein L9, bacteria/chloroplast HCD_05465 IPR036791 HCD_05465 HCD_05465 IPR036935 HCD_05465 HCD_05470 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain HCD_05470 IPR004090 Chemotaxis methyl-accepting receptor HCD_05470 IPR033480 HCD_05470 HCD_05475 IPR004809 Glutamine synthetase type I HCD_05475 IPR008146 Glutamine synthetase, catalytic domain HCD_05475 IPR008147 Glutamine synthetase, beta-Grasp HCD_05475 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain HCD_05475 IPR027303 Glutamine synthetase, glycine-rich site HCD_05475 IPR036651 HCD_05475 HCD_05485 IPR002718 Outer membrane protein, Helicobacter HCD_05490 IPR004311 Vacuolating cytotoxin, putative HCD_05490 IPR005546 Autotransporter beta-domain HCD_05490 IPR006626 Parallel beta-helix repeat HCD_05490 IPR036709 HCD_05490 HCD_05495 IPR000846 Dihydrodipicolinate reductase, N-terminal HCD_05495 IPR022663 Dihydrodipicolinate reductase, C-terminal HCD_05495 IPR022664 Dihydrodipicolinate reductase, conserved site HCD_05495 IPR023940 Dihydrodipicolinate reductase, bacterial HCD_05495 IPR036291 HCD_05495 HCD_05500 IPR003615 HNH nuclease HCD_05510 IPR001525 C-5 cytosine methyltransferase HCD_05510 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_05510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_05515 IPR004113 FAD-linked oxidase, C-terminal HCD_05515 IPR004490 Glycolate oxidase subunit GlcD HCD_05515 IPR006094 FAD linked oxidase, N-terminal HCD_05515 IPR016164 FAD-linked oxidase-like, C-terminal HCD_05515 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 HCD_05515 IPR036318 HCD_05515 HCD_05520 IPR029276 Plasminogen-binding protein PgbA, N-terminal HCD_05520 IPR032737 HCD_05520 HCD_05525 IPR004385 Nucleoside diphosphate pyrophosphatase HCD_05525 IPR015797 NUDIX hydrolase domain-like HCD_05530 IPR011055 Duplicated hybrid motif HCD_05530 IPR016047 Peptidase M23 HCD_05535 IPR004536 Selenide water dikinase HCD_05535 IPR010918 AIR synthase-related protein, C-terminal domain HCD_05535 IPR016188 PurM, N-terminal-like HCD_05535 IPR036676 HCD_05535 HCD_05535 IPR036921 HCD_05535 HCD_05545 IPR003678 Putative outer membrane protein HCD_05555 IPR004564 Outer membrane lipoprotein carrier protein LolA-like HCD_05555 IPR029046 Lipoprotein localisation LolA/LolB/LppX HCD_05560 IPR000185 Protein translocase subunit SecA HCD_05560 IPR001650 Helicase, C-terminal HCD_05560 IPR004027 SEC-C motif HCD_05560 IPR011115 SecA DEAD-like, N-terminal HCD_05560 IPR011116 SecA Wing/Scaffold HCD_05560 IPR011130 SecA preprotein, cross-linking domain HCD_05560 IPR020937 SecA conserved site HCD_05560 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05560 IPR036266 HCD_05560 HCD_05560 IPR036670 HCD_05560 HCD_05565 IPR003838 Permease FtsX-like HCD_05565 IPR025857 MacB-like periplasmic core domain HCD_05570 IPR003678 Putative outer membrane protein HCD_05575 IPR002718 Outer membrane protein, Helicobacter HCD_05580 IPR002718 Outer membrane protein, Helicobacter HCD_05585 IPR002718 Outer membrane protein, Helicobacter HCD_05590 IPR001757 Cation-transporting P-type ATPase HCD_05590 IPR006121 Heavy metal-associated domain, HMA HCD_05590 IPR008250 P-type ATPase, A domain HCD_05590 IPR017969 Heavy-metal-associated, conserved site HCD_05590 IPR018303 P-type ATPase, phosphorylation site HCD_05590 IPR023214 HAD-like domain HCD_05590 IPR023298 P-type ATPase, transmembrane domain HCD_05590 IPR023299 P-type ATPase, cytoplasmic domain N HCD_05590 IPR027256 Cation-transporting P-type ATPase, subfamily IB HCD_05590 IPR036163 HCD_05590 HCD_05590 IPR036412 HCD_05590 HCD_05595 IPR000523 Magnesium chelatase, ChlI subunit HCD_05595 IPR004482 Mg chelatase-related protein HCD_05595 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_05595 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_05595 IPR025158 Mg chelatase-related protein, C-terminal domain HCD_05595 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 HCD_05595 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05600 IPR023635 Peptide deformylase HCD_05600 IPR036821 HCD_05600 HCD_05605 IPR001907 ATP-dependent Clp protease proteolytic subunit HCD_05605 IPR018215 ClpP, active site HCD_05605 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA HCD_05605 IPR029045 ClpP/crotonase-like domain HCD_05605 IPR033135 HCD_05605 HCD_05610 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain HCD_05610 IPR005215 Trigger factor HCD_05610 IPR008880 Trigger factor, C-terminal domain HCD_05610 IPR008881 Trigger factor, ribosome-binding, bacterial HCD_05610 IPR027304 Trigger factor/SurA domain HCD_05610 IPR036611 HCD_05610 HCD_05610 IPR037041 HCD_05610 HCD_05615 IPR005623 Chaperone NapD, nitrate reductase assembly HCD_05620 IPR011886 Ferredoxin-type protein, NapH/MauN family HCD_05620 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_05620 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_05625 IPR004494 MauM/NapG ferredoxin-type protein HCD_05625 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_05625 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_05630 IPR006656 Molybdopterin oxidoreductase HCD_05630 IPR006657 Molydopterin dinucleotide-binding domain HCD_05630 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain HCD_05630 IPR009010 Aspartate decarboxylase-like domain HCD_05630 IPR010051 Periplasmic nitrate reductase, large subunit HCD_05630 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site HCD_05635 IPR007876 Neuraminyllactose-binding hemagglutinin HCD_05635 IPR038531 HCD_05635 HCD_05640 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain HCD_05640 IPR023045 Molybdenum cofactor biosynthesis C HCD_05640 IPR036522 HCD_05640 HCD_05645 IPR001453 Molybdopterin binding domain HCD_05645 IPR008284 Molybdenum cofactor biosynthesis, conserved site HCD_05645 IPR036425 HCD_05645 HCD_05650 IPR003448 Molybdopterin biosynthesis MoaE HCD_05650 IPR036563 HCD_05650 HCD_05655 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 HCD_05655 IPR012675 Beta-grasp domain HCD_05655 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp HCD_05660 IPR001453 Molybdopterin binding domain HCD_05660 IPR005110 MoeA, N-terminal and linker domain HCD_05660 IPR008284 Molybdenum cofactor biosynthesis, conserved site HCD_05660 IPR036135 HCD_05660 HCD_05660 IPR036425 HCD_05660 HCD_05660 IPR036688 HCD_05660 HCD_05665 IPR000926 GTP cyclohydrolase II, RibA HCD_05665 IPR032677 HCD_05665 HCD_05665 IPR036144 HCD_05665 HCD_05670 IPR025079 Domain of unknown function DUF3943 HCD_05675 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB HCD_05675 IPR017945 DHBP synthase RibB-like alpha/beta domain HCD_05675 IPR032677 HCD_05675 HCD_05675 IPR036144 HCD_05675 HCD_05680 IPR005950 Molybdenum ABC transporter, periplasmic binding protein HCD_05685 IPR000515 MetI-like domain HCD_05685 IPR011867 Molybdate ABC transporter, permease protein HCD_05685 IPR035906 HCD_05685 HCD_05690 IPR003439 ABC transporter-like HCD_05690 IPR003593 AAA+ ATPase domain HCD_05690 IPR017871 ABC transporter, conserved site HCD_05690 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05695 IPR002654 Glycosyl transferase, family 25 HCD_05700 IPR002725 Protein of unknown function DUF45 HCD_05705 IPR006597 Sel1-like HCD_05705 IPR011990 Tetratricopeptide-like helical domain HCD_05710 IPR001451 Bacterial transferase hexapeptide repeat HCD_05710 IPR011004 Trimeric LpxA-like HCD_05710 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family HCD_05710 IPR032784 HCD_05710 HCD_05710 IPR038361 HCD_05710 HCD_05715 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type HCD_05715 IPR011005 Dihydropteroate synthase-like HCD_05715 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial HCD_05715 IPR036849 HCD_05715 HCD_05720 IPR004839 Aminotransferase, class I/classII HCD_05720 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_05720 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_05720 IPR015424 Pyridoxal phosphate-dependent transferase HCD_05725 IPR000713 Mur ligase, N-terminal HCD_05725 IPR004101 Mur ligase, C-terminal HCD_05725 IPR005758 UDP-N-acetylmuramate-alanine ligase HCD_05725 IPR013221 Mur ligase, central HCD_05725 IPR036565 HCD_05725 HCD_05725 IPR036615 HCD_05725 HCD_05735 IPR000432 DNA mismatch repair protein MutS, C-terminal HCD_05735 IPR002625 Smr protein/MutS2 C-terminal HCD_05735 IPR005747 Endonuclease MutS2 HCD_05735 IPR007696 DNA mismatch repair protein MutS, core HCD_05735 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05735 IPR036063 HCD_05735 HCD_05735 IPR036187 HCD_05735 HCD_05740 IPR002654 Glycosyl transferase, family 25 HCD_05745 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II HCD_05745 IPR005982 Thioredoxin reductase HCD_05745 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site HCD_05745 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain HCD_05745 IPR036188 HCD_05745 HCD_05750 IPR005746 Thioredoxin HCD_05750 IPR013766 Thioredoxin domain HCD_05750 IPR017937 Thioredoxin, conserved site HCD_05750 IPR036249 HCD_05750 HCD_05755 IPR003509 Uncharacterised protein family UPF0102 HCD_05755 IPR011335 Restriction endonuclease type II-like HCD_05755 IPR011856 tRNA endonuclease-like domain HCD_05760 IPR001342 Homoserine dehydrogenase, catalytic HCD_05760 IPR002912 ACT domain HCD_05760 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding HCD_05760 IPR016204 Homoserine dehydrogenase HCD_05760 IPR019811 Homoserine dehydrogenase, conserved site HCD_05760 IPR036291 HCD_05760 HCD_05765 IPR000305 GIY-YIG nuclease superfamily HCD_05765 IPR001162 UvrC family homology region HCD_05765 IPR001943 UVR domain HCD_05765 IPR004791 UvrABC system, subunit C HCD_05765 IPR010994 RuvA domain 2-like HCD_05765 IPR035901 HCD_05765 HCD_05765 IPR036876 HCD_05765 HCD_05765 IPR038476 HCD_05765 HCD_05775 IPR003439 ABC transporter-like HCD_05775 IPR003593 AAA+ ATPase domain HCD_05775 IPR017871 ABC transporter, conserved site HCD_05775 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05780 IPR000515 MetI-like domain HCD_05780 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain HCD_05780 IPR035906 HCD_05780 HCD_05785 IPR002718 Outer membrane protein, Helicobacter HCD_05790 IPR002718 Outer membrane protein, Helicobacter HCD_05805 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal HCD_05805 IPR025713 Motility protein B, N-terminal domain HCD_05805 IPR036737 HCD_05805 HCD_05810 IPR000540 Flagellar motor protein MotA, conserved site HCD_05810 IPR002898 MotA/TolQ/ExbB proton channel HCD_05815 IPR000594 UBA/THIF-type NAD/FAD binding fold HCD_05815 IPR035985 HCD_05815 HCD_05820 IPR001279 Beta-lactamase-like HCD_05820 IPR036866 HCD_05820 HCD_05825 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA HCD_05825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_05825 IPR038375 HCD_05825 HCD_05830 IPR003678 Putative outer membrane protein HCD_05835 IPR003678 Putative outer membrane protein HCD_05840 IPR003678 Putative outer membrane protein HCD_05845 IPR003678 Putative outer membrane protein HCD_05850 IPR003678 Putative outer membrane protein HCD_05855 IPR000531 TonB-dependent receptor, beta-barrel HCD_05855 IPR012910 TonB-dependent receptor, plug HCD_05855 IPR037066 HCD_05855 HCD_05860 IPR017945 DHBP synthase RibB-like alpha/beta domain HCD_05865 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain HCD_05865 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain HCD_05865 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain HCD_05865 IPR006275 Carbamoyl-phosphate synthase, large subunit HCD_05865 IPR011607 Methylglyoxal synthase-like domain HCD_05865 IPR016185 Pre-ATP-grasp domain HCD_05865 IPR036897 HCD_05865 HCD_05865 IPR036914 HCD_05865 HCD_05870 IPR006214 Bax inhibitor 1-related HCD_05875 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I HCD_05875 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain HCD_05875 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain HCD_05875 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site HCD_05875 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family HCD_05875 IPR036291 HCD_05875 HCD_05885 IPR004311 Vacuolating cytotoxin, putative HCD_05885 IPR005546 Autotransporter beta-domain HCD_05885 IPR036709 HCD_05885 HCD_05890 IPR004370 4-oxalocrotonate tautomerase HCD_05890 IPR014347 Tautomerase/MIF superfamily HCD_05890 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type HCD_05895 IPR000093 DNA recombination protein RecR HCD_05895 IPR015967 Recombination protein RecR, conserved site HCD_05895 IPR023627 Recombination protein RecR HCD_05895 IPR023628 Recombination protein RecR, C4-type zinc finger HCD_05900 IPR001656 Pseudouridine synthase, TruD HCD_05900 IPR020103 Pseudouridine synthase, catalytic domain HCD_05900 IPR020119 Pseudouridine synthase TruD, conserved site HCD_05905 IPR001915 Peptidase M48 HCD_05905 IPR022919 Peptidase M48, protease HtpX, putative HCD_05910 IPR001474 GTP cyclohydrolase I HCD_05910 IPR018234 GTP cyclohydrolase I, conserved site HCD_05910 IPR020602 GTP cyclohydrolase I domain HCD_05915 IPR000092 Polyprenyl synthetase HCD_05915 IPR008949 Terpenoid synthase HCD_05915 IPR033749 HCD_05915 HCD_05920 IPR002828 Survival protein SurE-like phosphatase/nucleotidase HCD_05920 IPR030048 HCD_05920 HCD_05920 IPR036523 HCD_05920 HCD_05930 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein HCD_05930 IPR038418 HCD_05930 HCD_05935 IPR013785 Aldolase-type TIM barrel HCD_05935 IPR024924 7-carboxy-7-deazaguanine synthase-like HCD_05940 IPR004919 Domain of unknown function DUF262 HCD_05945 IPR000640 Translation elongation factor EFG, V domain HCD_05945 IPR000795 Elongation factor, GTP-binding domain HCD_05945 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 HCD_05945 IPR005225 Small GTP-binding protein domain HCD_05945 IPR006298 GTP-binding protein TypA HCD_05945 IPR009000 Translation protein, beta-barrel domain HCD_05945 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_05945 IPR031157 HCD_05945 HCD_05945 IPR035647 HCD_05945 HCD_05955 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_05955 IPR003356 DNA methylase, adenine-specific HCD_05955 IPR025931 TaqI-like C-terminal specificity domain HCD_05955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_05960 IPR002718 Outer membrane protein, Helicobacter HCD_05965 IPR000924 Glutamyl/glutaminyl-tRNA synthetase HCD_05965 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_05965 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial HCD_05965 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding HCD_05965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_05965 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain HCD_05965 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 HCD_05970 IPR002718 Outer membrane protein, Helicobacter HCD_05975 IPR006153 Cation/H+ exchanger HCD_05975 IPR038770 HCD_05975 HCD_05980 IPR001567 Peptidase M3A/M3B HCD_05980 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 HCD_05980 IPR013647 Oligopeptidase F, N-terminal domain HCD_05990 IPR012675 Beta-grasp domain HCD_06000 IPR007791 Heat shock protein DnaJ-like protein DjlA HCD_06000 IPR029024 TerB-like HCD_06015 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like HCD_06020 IPR003414 Polyphosphate kinase HCD_06020 IPR024953 Polyphosphate kinase middle domain HCD_06020 IPR025198 Polyphosphate kinase N-terminal domain HCD_06020 IPR025200 Polyphosphate kinase C-terminal domain HCD_06020 IPR036830 HCD_06020 HCD_06020 IPR036832 HCD_06020 HCD_06025 IPR001295 Dihydroorotate dehydrogenase, conserved site HCD_06025 IPR005719 Dihydroorotate dehydrogenase, class 2 HCD_06025 IPR005720 Dihydroorotate dehydrogenase domain HCD_06025 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 HCD_06025 IPR013785 Aldolase-type TIM barrel HCD_06030 IPR001431 Peptidase M16, zinc-binding site HCD_06030 IPR007863 Peptidase M16, C-terminal domain HCD_06030 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like HCD_06030 IPR011765 Peptidase M16, N-terminal HCD_06035 IPR002220 DapA-like HCD_06035 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA HCD_06035 IPR013785 Aldolase-type TIM barrel HCD_06035 IPR020625 Dihydrodipicolinate synthetase, active site HCD_06040 IPR002347 Glucose/ribitol dehydrogenase HCD_06040 IPR036291 HCD_06040 HCD_06050 IPR000462 CDP-alcohol phosphatidyltransferase HCD_06050 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase HCD_06055 IPR002293 Amino acid/polyamine transporter I HCD_06055 IPR004840 Amino acid permease, conserved site HCD_06055 IPR004841 Amino acid permease/ SLC12A domain HCD_06060 IPR001478 PDZ domain HCD_06060 IPR001940 Peptidase S1C HCD_06060 IPR009003 Trypsin-like cysteine/serine peptidase domain HCD_06060 IPR011782 Peptidase S1C, Do HCD_06060 IPR036034 HCD_06060 HCD_06065 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase HCD_06065 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site HCD_06065 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site HCD_06065 IPR026596 Bifunctional enzyme IspD/IspF HCD_06065 IPR029044 Nucleotide-diphospho-sugar transferases HCD_06065 IPR034683 HCD_06065 HCD_06065 IPR036571 HCD_06065 HCD_06070 IPR001789 Signal transduction response regulator, receiver domain HCD_06070 IPR011006 CheY-like superfamily HCD_06070 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted HCD_06075 IPR002421 5'-3' exonuclease, N-terminal HCD_06075 IPR008918 Helix-hairpin-helix motif, class 2 HCD_06075 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal HCD_06075 IPR029060 PIN domain-like HCD_06075 IPR036279 HCD_06075 HCD_06085 IPR001623 DnaJ domain HCD_06085 IPR002939 Chaperone DnaJ, C-terminal HCD_06085 IPR008971 HSP40/DnaJ peptide-binding HCD_06085 IPR018253 DnaJ domain, conserved site HCD_06085 IPR036869 HCD_06085 HCD_06090 IPR000551 MerR-type HTH domain HCD_06090 IPR009061 DNA binding domain, putative HCD_06095 IPR003593 AAA+ ATPase domain HCD_06095 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal HCD_06095 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal HCD_06095 IPR021886 MgsA AAA+ ATPase C-terminal HCD_06095 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06095 IPR032423 HCD_06095 HCD_06100 IPR002481 Ferric-uptake regulator HCD_06100 IPR036388 HCD_06100 HCD_06100 IPR036390 HCD_06100 HCD_06105 IPR019223 Domain of unknown function DUF2147 HCD_06110 IPR004375 Conserved hypothetical protein CHP00022 HCD_06110 IPR037012 HCD_06110 HCD_06115 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb HCD_06115 IPR001543 Surface presentation of antigen (SpoA) HCD_06115 IPR012826 Flagellar motor switch FliN HCD_06115 IPR028976 CheC-like domain HCD_06115 IPR036429 HCD_06115 HCD_06120 IPR001543 Surface presentation of antigen (SpoA) HCD_06120 IPR001689 Flagellar motor switch protein FliM HCD_06120 IPR028976 CheC-like domain HCD_06120 IPR036429 HCD_06120 HCD_06125 IPR000943 RNA polymerase sigma-70 HCD_06125 IPR007627 RNA polymerase sigma-70 region 2 HCD_06125 IPR007630 RNA polymerase sigma-70 region 4 HCD_06125 IPR012845 RNA polymerase sigma factor, FliA/WhiG HCD_06125 IPR013324 RNA polymerase sigma factor, region 3/4 HCD_06125 IPR013325 RNA polymerase sigma factor, region 2 HCD_06125 IPR014284 RNA polymerase sigma-70 like domain HCD_06135 IPR025501 ATP binding protein MinD HCD_06135 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06135 IPR033756 HCD_06135 HCD_06140 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain HCD_06140 IPR003593 AAA+ ATPase domain HCD_06140 IPR020006 Signal-recognition particle (SRP)-type GTPase HCD_06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06145 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK HCD_06145 IPR035907 HCD_06145 HCD_06150 IPR000587 Creatinase, N-terminal HCD_06150 IPR000994 Peptidase M24, structural domain HCD_06150 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site HCD_06150 IPR001714 Peptidase M24, methionine aminopeptidase HCD_06150 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal HCD_06150 IPR036005 HCD_06150 HCD_06155 IPR001874 Dehydroquinase, class II HCD_06155 IPR018509 Dehydroquinase, class II, conserved site HCD_06155 IPR036441 HCD_06155 HCD_06160 IPR007016 O-antigen ligase-related HCD_06165 IPR000589 Ribosomal protein S15 HCD_06165 IPR005290 Ribosomal protein S15, bacterial-type HCD_06165 IPR009068 S15/NS1, RNA-binding HCD_06180 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_06180 IPR010095 Transposase IS605, OrfB, C-terminal HCD_06180 IPR021027 Transposase, putative, helix-turn-helix domain HCD_06185 IPR002686 Transposase IS200-like HCD_06185 IPR036515 HCD_06185 HCD_06190 IPR002718 Outer membrane protein, Helicobacter HCD_06195 IPR006597 Sel1-like HCD_06195 IPR011990 Tetratricopeptide-like helical domain HCD_06195 IPR019734 Tetratricopeptide repeat HCD_06200 IPR036909 HCD_06200 HCD_06205 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase HCD_06205 IPR022417 Porphobilinogen deaminase, N-terminal HCD_06205 IPR022418 Porphobilinogen deaminase, C-terminal HCD_06205 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site HCD_06205 IPR036803 HCD_06205 HCD_06210 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain HCD_06210 IPR002316 Proline-tRNA ligase, class IIa HCD_06210 IPR004154 Anticodon-binding HCD_06210 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type HCD_06210 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain HCD_06210 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 HCD_06210 IPR036621 HCD_06210 HCD_06210 IPR036754 HCD_06210 HCD_06215 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase HCD_06215 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase HCD_06215 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal HCD_06215 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain HCD_06215 IPR018214 Glutamyl-tRNA reductase, conserved site HCD_06215 IPR036291 HCD_06215 HCD_06215 IPR036343 HCD_06215 HCD_06215 IPR036453 HCD_06215 HCD_06220 IPR000092 Polyprenyl synthetase HCD_06220 IPR008949 Terpenoid synthase HCD_06220 IPR033749 HCD_06220 HCD_06230 IPR018563 Protein of unknown function DUF2018 HCD_06230 IPR023126 HP0242-like domain HCD_06235 IPR002177 DNA-binding protein Dps HCD_06235 IPR008331 Ferritin/DPS protein domain HCD_06235 IPR009078 Ferritin-like superfamily HCD_06235 IPR012347 Ferritin-related HCD_06235 IPR023188 DNA-binding protein Dps, conserved site HCD_06240 IPR003594 Histidine kinase-like ATPase, C-terminal domain HCD_06240 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain HCD_06240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal HCD_06240 IPR036097 HCD_06240 HCD_06240 IPR036890 HCD_06240 HCD_06245 IPR016511 Uncharacterised conserved protein UCP007248 HCD_06245 IPR019301 Flagellar protein FlgJ, N-terminal HCD_06250 IPR001782 Flagellar P-ring protein HCD_06255 IPR001650 Helicase, C-terminal HCD_06255 IPR011545 DEAD/DEAH box helicase domain HCD_06255 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06260 IPR000163 Prohibitin HCD_06260 IPR001107 Band 7 protein HCD_06260 IPR036013 HCD_06260 HCD_06265 IPR013417 Conserved hypothetical protein CHP02588 HCD_06270 IPR002781 Transmembrane protein TauE like HCD_06275 IPR005094 Endonuclease relaxase, MobA/VirD2 HCD_06280 IPR003615 HNH nuclease HCD_06290 IPR001525 C-5 cytosine methyltransferase HCD_06290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_06290 IPR031303 HCD_06290 HCD_06295 IPR018448 Twin-arginine translocation protein TatB HCD_06300 IPR002033 Sec-independent periplasmic protein translocase TatC HCD_06300 IPR019820 Sec-independent periplasmic protein translocase, conserved site HCD_06305 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA HCD_06305 IPR036100 HCD_06305 HCD_06310 IPR003682 rRNA small subunit methyltransferase G HCD_06310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_06325 IPR002718 Outer membrane protein, Helicobacter HCD_06330 IPR001789 Signal transduction response regulator, receiver domain HCD_06330 IPR011006 CheY-like superfamily HCD_06335 IPR004498 Ribosomal protein L11 methyltransferase HCD_06335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_06340 IPR000642 Peptidase M41 HCD_06340 IPR003593 AAA+ ATPase domain HCD_06340 IPR003959 ATPase, AAA-type, core HCD_06340 IPR003960 ATPase, AAA-type, conserved site HCD_06340 IPR005936 Peptidase, FtsH HCD_06340 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06340 IPR037219 HCD_06340 HCD_06350 IPR000462 CDP-alcohol phosphatidyltransferase HCD_06350 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase HCD_06355 IPR001757 Cation-transporting P-type ATPase HCD_06355 IPR006121 Heavy metal-associated domain, HMA HCD_06355 IPR008250 P-type ATPase, A domain HCD_06355 IPR017969 Heavy-metal-associated, conserved site HCD_06355 IPR018303 P-type ATPase, phosphorylation site HCD_06355 IPR023214 HAD-like domain HCD_06355 IPR023298 P-type ATPase, transmembrane domain HCD_06355 IPR023299 P-type ATPase, cytoplasmic domain N HCD_06355 IPR027256 Cation-transporting P-type ATPase, subfamily IB HCD_06355 IPR036163 HCD_06355 HCD_06355 IPR036412 HCD_06355 HCD_06360 IPR000428 Copper ion binding protein HCD_06360 IPR006121 Heavy metal-associated domain, HMA HCD_06360 IPR006122 Heavy metal-associated domain, copper ion-binding HCD_06360 IPR036163 HCD_06360 HCD_06365 IPR000428 Copper ion binding protein HCD_06365 IPR006121 Heavy metal-associated domain, HMA HCD_06365 IPR006122 Heavy metal-associated domain, copper ion-binding HCD_06365 IPR036163 HCD_06365 HCD_06370 IPR006597 Sel1-like HCD_06370 IPR011990 Tetratricopeptide-like helical domain HCD_06385 IPR031489 HCD_06385 HCD_06385 IPR033397 HCD_06385 HCD_06385 IPR033398 HCD_06385 HCD_06390 IPR032411 HCD_06390 HCD_06390 IPR038315 HCD_06390 HCD_06395 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria HCD_06395 IPR011541 Nickel/cobalt transporter, high-affinity HCD_06400 IPR006597 Sel1-like HCD_06400 IPR011990 Tetratricopeptide-like helical domain HCD_06405 IPR007560 Restriction endonuclease type IV, Mrr HCD_06405 IPR011335 Restriction endonuclease type II-like HCD_06405 IPR011856 tRNA endonuclease-like domain HCD_06415 IPR003439 ABC transporter-like HCD_06415 IPR003593 AAA+ ATPase domain HCD_06415 IPR011527 ABC transporter type 1, transmembrane domain HCD_06415 IPR017871 ABC transporter, conserved site HCD_06415 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06415 IPR036640 HCD_06415 HCD_06420 IPR003678 Putative outer membrane protein HCD_06425 IPR002082 Aspartate carbamoyltransferase HCD_06425 IPR006130 Aspartate/ornithine carbamoyltransferase HCD_06425 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain HCD_06425 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding HCD_06425 IPR036901 HCD_06425 HCD_06435 IPR002877 Ribosomal RNA methyltransferase FtsJ domain HCD_06435 IPR002942 RNA-binding S4 domain HCD_06435 IPR004538 Haemolysin A HCD_06435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_06435 IPR036986 HCD_06435 HCD_06440 IPR002606 Riboflavin kinase, bacterial HCD_06440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_06440 IPR015864 FAD synthetase HCD_06440 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic HCD_06440 IPR023465 Riboflavin kinase domain HCD_06445 IPR005474 Transketolase, N-terminal HCD_06445 IPR005475 Transketolase-like, pyrimidine-binding domain HCD_06445 IPR005478 Transketolase, bacterial-like HCD_06445 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II HCD_06445 IPR020826 Transketolase binding site HCD_06445 IPR029061 Thiamin diphosphate-binding fold HCD_06445 IPR033248 HCD_06445 HCD_06450 IPR011335 Restriction endonuclease type II-like HCD_06450 IPR011604 Exonuclease, phage-type/RecB, C-terminal HCD_06450 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06450 IPR038726 HCD_06450 HCD_06455 IPR002543 FtsK domain HCD_06455 IPR003593 AAA+ ATPase domain HCD_06455 IPR018541 FtsK gamma domain HCD_06455 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06455 IPR036388 HCD_06455 HCD_06455 IPR036390 HCD_06455 HCD_06460 IPR005829 Sugar transporter, conserved site HCD_06460 IPR011701 Major facilitator superfamily HCD_06460 IPR036259 HCD_06460 HCD_06465 IPR001444 Flagellar basal body rod protein, N-terminal HCD_06465 IPR010930 Flagellar basal-body/hook protein, C-terminal domain HCD_06465 IPR019776 Flagellar basal body rod protein, conserved site HCD_06465 IPR020013 Fagellar hook-basal body protein, FlgE/F/G HCD_06465 IPR037925 HCD_06465 HCD_06475 IPR000415 Nitroreductase-like HCD_06475 IPR029479 Nitroreductase HCD_06480 IPR001640 Prolipoprotein diacylglyceryl transferase HCD_06485 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F HCD_06485 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site HCD_06485 IPR020103 Pseudouridine synthase, catalytic domain HCD_06490 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal HCD_06490 IPR038107 HCD_06490 HCD_06495 IPR003743 Protein of unknown function DUF164 HCD_06500 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 HCD_06500 IPR036069 HCD_06500 HCD_06505 IPR002310 Glycine-tRNA ligase, alpha subunit HCD_06510 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal HCD_06510 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent HCD_06510 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like HCD_06510 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal HCD_06510 IPR013328 Dehydrogenase, multihelical HCD_06510 IPR036291 HCD_06510 HCD_06515 IPR002718 Outer membrane protein, Helicobacter HCD_06525 IPR005094 Endonuclease relaxase, MobA/VirD2 HCD_06535 IPR002104 Integrase, catalytic HCD_06535 IPR011010 DNA breaking-rejoining enzyme, catalytic core HCD_06535 IPR013762 Integrase-like, catalytic core HCD_06540 IPR014942 Protein of unknown function DUF1814 HCD_06555 IPR003812 Fido domain HCD_06555 IPR036597 HCD_06555 HCD_06565 IPR011639 Restriction modification methylase Eco57I HCD_06565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_06570 IPR001207 Transposase, mutator type HCD_06575 IPR001207 Transposase, mutator type HCD_06580 IPR002718 Outer membrane protein, Helicobacter HCD_06590 IPR002780 Hydrogenase formation HypD protein HCD_06595 IPR001109 Hydrogenase expression/formation protein, HupF/HypC HCD_06595 IPR019812 Hydrogenase assembly chaperone, conserved site HCD_06595 IPR037254 HCD_06595 HCD_06600 IPR003495 CobW/HypB/UreG domain HCD_06600 IPR004392 Hydrogenase accessory protein HypB HCD_06600 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase HCD_06600 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06605 IPR011051 RmlC-like cupin domain HCD_06605 IPR014710 RmlC-like jelly roll fold HCD_06610 IPR000890 Aliphatic acid kinase, short-chain HCD_06610 IPR004372 Acetate/Proprionate kinase HCD_06610 IPR023865 Aliphatic acid kinase, short-chain, conserved site HCD_06615 IPR002505 Phosphate acetyl/butaryl transferase HCD_06615 IPR004614 Phosphate acetyltransferase HCD_06620 IPR021136 Flagellar hook-length control protein-like, C-terminal HCD_06620 IPR038610 HCD_06620 HCD_06625 IPR005648 Flagellar hook capping protein HCD_06625 IPR025965 FlgD Ig-like domain HCD_06630 IPR010930 Flagellar basal-body/hook protein, C-terminal domain HCD_06630 IPR011491 Flagellar basal body FlaE HCD_06630 IPR019776 Flagellar basal body rod protein, conserved site HCD_06630 IPR020013 Fagellar hook-basal body protein, FlgE/F/G HCD_06630 IPR037925 HCD_06630 HCD_06660 IPR003439 ABC transporter-like HCD_06660 IPR003593 AAA+ ATPase domain HCD_06660 IPR017871 ABC transporter, conserved site HCD_06660 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06665 IPR000522 ABC transporter, permease protein HCD_06665 IPR037294 HCD_06665 HCD_06670 IPR002347 Glucose/ribitol dehydrogenase HCD_06670 IPR020904 Short-chain dehydrogenase/reductase, conserved site HCD_06670 IPR036291 HCD_06670 HCD_06675 IPR006683 Thioesterase superfamily HCD_06675 IPR029069 HotDog domain HCD_06680 IPR000531 TonB-dependent receptor, beta-barrel HCD_06680 IPR012910 TonB-dependent receptor, plug HCD_06680 IPR037066 HCD_06680 HCD_06685 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal HCD_06685 IPR021634 Protein of unknown function DUF3240 HCD_06690 IPR001036 Acriflavin resistance protein HCD_06690 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA HCD_06690 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains HCD_06700 IPR003423 Outer membrane efflux protein HCD_06705 IPR015944 Glycine-tRNA ligase, beta subunit HCD_06715 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent HCD_06715 IPR006124 Metalloenzyme HCD_06715 IPR011258 BPG-independent PGAM, N-terminal HCD_06715 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha HCD_06715 IPR017850 Alkaline-phosphatase-like, core domain HCD_06715 IPR036646 HCD_06715 HCD_06720 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit HCD_06720 IPR036113 HCD_06720 HCD_06725 IPR008331 Ferritin/DPS protein domain HCD_06725 IPR009078 Ferritin-like superfamily HCD_06725 IPR012347 Ferritin-related HCD_06730 IPR023190 Phosphoserine phosphatase, domain 2 HCD_06730 IPR023214 HAD-like domain HCD_06730 IPR036412 HCD_06730 HCD_06740 IPR001503 Glycosyl transferase, family 10 HCD_06740 IPR038577 HCD_06740 HCD_06745 IPR005122 Uracil-DNA glycosylase-like HCD_06745 IPR036895 HCD_06745 HCD_06750 IPR000362 Fumarate lyase family HCD_06750 IPR004708 Aspartate ammonia-lyase HCD_06750 IPR008948 L-Aspartase-like HCD_06750 IPR018951 Fumarase C, C-terminal HCD_06750 IPR020557 Fumarate lyase, conserved site HCD_06750 IPR022761 Fumarate lyase, N-terminal HCD_06750 IPR024083 Fumarase/histidase, N-terminal HCD_06755 IPR001986 Enolpyruvate transferase domain HCD_06755 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase HCD_06755 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta HCD_06755 IPR036968 HCD_06755 HCD_06765 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type HCD_06765 IPR005835 Nucleotidyl transferase HCD_06765 IPR029044 Nucleotide-diphospho-sugar transferases HCD_06770 IPR008258 Lytic transglycosylase-like SLT domain HCD_06770 IPR023346 Lysozyme-like domain HCD_06775 IPR003425 Uncharacterised protein family Ycf19 HCD_06780 IPR000924 Glutamyl/glutaminyl-tRNA synthetase HCD_06780 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_06780 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial HCD_06780 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding HCD_06780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_06780 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain HCD_06780 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 HCD_06785 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase HCD_06785 IPR012094 Lysidine-tRNA(Ile) synthetase HCD_06785 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal HCD_06785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_06790 IPR005839 Methylthiotransferase HCD_06790 IPR005840 Ribosomal protein S12 methylthiotransferase RimO HCD_06790 IPR006638 Elongator protein 3/MiaB/NifB HCD_06790 IPR007197 Radical SAM HCD_06790 IPR013848 Methylthiotransferase, N-terminal HCD_06790 IPR020612 Methylthiotransferase, conserved site HCD_06790 IPR023404 Radical SAM, alpha/beta horseshoe HCD_06790 IPR038135 HCD_06790 HCD_06795 IPR000836 Phosphoribosyltransferase domain HCD_06795 IPR029057 Phosphoribosyltransferase-like HCD_06800 IPR000192 Aminotransferase class V domain HCD_06800 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_06800 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_06800 IPR015424 Pyridoxal phosphate-dependent transferase HCD_06800 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site HCD_06800 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase HCD_06805 IPR007686 YutG/PgpA domain HCD_06805 IPR026037 Phosphatidylglycerophosphatase A HCD_06805 IPR036681 HCD_06805 HCD_06810 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site HCD_06810 IPR005905 D-alanine--D-alanine ligase HCD_06810 IPR011095 D-alanine--D-alanine ligase, C-terminal HCD_06810 IPR011127 D-alanine--D-alanine ligase, N-terminal domain HCD_06810 IPR013815 ATP-grasp fold, subdomain 1 HCD_06810 IPR016185 Pre-ATP-grasp domain HCD_06815 IPR000073 Alpha/beta hydrolase fold-1 HCD_06815 IPR029058 Alpha/Beta hydrolase fold HCD_06820 IPR013221 Mur ligase, central HCD_06820 IPR036565 HCD_06820 HCD_06820 IPR036615 HCD_06820 HCD_06825 IPR001310 Histidine triad (HIT) protein HCD_06825 IPR036265 HCD_06825 HCD_06830 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site HCD_06830 IPR005946 Ribose-phosphate diphosphokinase HCD_06830 IPR029057 Phosphoribosyltransferase-like HCD_06830 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain HCD_06830 IPR037515 HCD_06830 HCD_06835 IPR001182 Cell cycle protein FtsW/RodA HCD_06835 IPR011923 Rod shape-determining protein RodA HCD_06835 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site HCD_06840 IPR002942 RNA-binding S4 domain HCD_06840 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F HCD_06840 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site HCD_06840 IPR006225 Pseudouridine synthase, RluC/RluD HCD_06840 IPR020103 Pseudouridine synthase, catalytic domain HCD_06840 IPR036986 HCD_06840 HCD_06845 IPR003961 Fibronectin, type III HCD_06845 IPR013783 Immunoglobulin-like fold HCD_06845 IPR036116 HCD_06845 HCD_06850 IPR003358 tRNA (guanine-N-7) methyltransferase HCD_06850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_06855 IPR003439 ABC transporter-like HCD_06855 IPR003593 AAA+ ATPase domain HCD_06855 IPR017871 ABC transporter, conserved site HCD_06855 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06865 IPR011055 Duplicated hybrid motif HCD_06865 IPR016047 Peptidase M23 HCD_06870 IPR002528 Multi antimicrobial extrusion protein HCD_06875 IPR018461 Na+/H+ antiporter, NhaC-like HCD_06875 IPR032813 HCD_06875 HCD_06880 IPR003010 Carbon-nitrogen hydrolase HCD_06880 IPR036526 HCD_06880 HCD_06885 IPR000594 UBA/THIF-type NAD/FAD binding fold HCD_06885 IPR035985 HCD_06885 HCD_06895 IPR003713 Flagellar protein FliS HCD_06895 IPR036584 HCD_06895 HCD_06900 IPR003481 Flagellar hook-associated protein 2, N-terminal HCD_06900 IPR010809 Flagellar hook-associated 2, C-terminal HCD_06905 IPR005186 Flagellar protein FlaG protein HCD_06905 IPR035924 HCD_06905 HCD_06910 IPR003607 HD/PDEase domain HCD_06910 IPR004087 K Homology domain HCD_06910 IPR004088 K Homology domain, type 1 HCD_06910 IPR006674 HD domain HCD_06910 IPR006675 Uncharacterised domain HDIG HCD_06910 IPR017705 Ribonuclease Y HCD_06910 IPR036612 HCD_06910 HCD_06915 IPR002698 5-formyltetrahydrofolate cyclo-ligase HCD_06915 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain HCD_06915 IPR037171 HCD_06915 HCD_06925 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain HCD_06925 IPR004390 Signal-recognition particle receptor FtsY HCD_06925 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_06940 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site HCD_06940 IPR006638 Elongator protein 3/MiaB/NifB HCD_06940 IPR007197 Radical SAM HCD_06940 IPR010505 Molybdenum cofactor synthesis C-terminal HCD_06940 IPR013483 Molybdenum cofactor biosynthesis protein A HCD_06940 IPR013785 Aldolase-type TIM barrel HCD_06945 IPR013482 Molybdenum cofactor guanylyltransferase HCD_06945 IPR025877 MobA-like NTP transferase domain HCD_06945 IPR029044 Nucleotide-diphospho-sugar transferases HCD_06950 IPR006135 Type III secretion system substrate exporter HCD_06950 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB HCD_06950 IPR029025 Type III secretion system substrate exporter, C-terminal HCD_06955 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha HCD_06955 IPR004406 Aconitase B, bacterial HCD_06955 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel HCD_06955 IPR015929 Aconitase B, N-terminal, bacterial HCD_06955 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 HCD_06955 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 HCD_06955 IPR015933 Aconitase B, HEAT-like, bacterial HCD_06955 IPR018136 Aconitase family, 4Fe-4S cluster binding site HCD_06955 IPR036008 HCD_06955 HCD_06955 IPR036288 HCD_06955 HCD_06960 IPR003773 Menaquinone biosynthesis enzyme HCD_06960 IPR030868 HCD_06960 HCD_06965 IPR002718 Outer membrane protein, Helicobacter HCD_06980 IPR002508 Cell wall hydrolase/autolysin, catalytic HCD_06985 IPR004136 2-nitropropane dioxygenase, NPD HCD_06985 IPR013785 Aldolase-type TIM barrel HCD_06990 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_06990 IPR002305 Aminoacyl-tRNA synthetase, class Ic HCD_06990 IPR002307 Tyrosine-tRNA ligase HCD_06990 IPR002942 RNA-binding S4 domain HCD_06990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_06990 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 HCD_06990 IPR036986 HCD_06990 HCD_06995 IPR003607 HD/PDEase domain HCD_06995 IPR004095 TGS HCD_06995 IPR004811 RelA/SpoT family HCD_06995 IPR007685 RelA/SpoT HCD_06995 IPR012675 Beta-grasp domain HCD_06995 IPR012676 TGS-like HCD_07000 IPR003716 DNA-directed RNA polymerase, omega subunit HCD_07000 IPR006110 RNA polymerase, subunit omega/K/RPB6 HCD_07000 IPR012293 RNA polymerase subunit, RPB6/omega HCD_07000 IPR036161 HCD_07000 HCD_07005 IPR001048 Aspartate/glutamate/uridylate kinase HCD_07005 IPR011817 Uridylate kinase HCD_07005 IPR015963 Uridylate kinase, bacteria HCD_07005 IPR036393 HCD_07005 HCD_07010 IPR005814 Aminotransferase class-III HCD_07010 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA HCD_07010 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_07010 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_07010 IPR015424 Pyridoxal phosphate-dependent transferase HCD_07015 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type HCD_07015 IPR027304 Trigger factor/SurA domain HCD_07020 IPR003494 SHS2 domain inserted in FtsA HCD_07020 IPR020823 Cell division protein FtsA HCD_07025 IPR000158 Cell division protein FtsZ HCD_07025 IPR003008 Tubulin/FtsZ, GTPase domain HCD_07025 IPR008280 Tubulin/FtsZ, C-terminal HCD_07025 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain HCD_07025 IPR020805 Cell division protein FtsZ, conserved site HCD_07025 IPR024757 Cell division protein FtsZ, C-terminal HCD_07025 IPR036525 HCD_07025 HCD_07025 IPR037103 HCD_07025 HCD_07040 IPR036736 HCD_07040 HCD_07045 IPR036597 HCD_07045 HCD_07065 IPR001544 Aminotransferase, class IV HCD_07065 IPR005801 ADC synthase HCD_07065 IPR015890 Chorismate binding, C-terminal HCD_07065 IPR019999 Anthranilate synthase component I - like HCD_07065 IPR036038 HCD_07065 HCD_07070 IPR016181 Acyl-CoA N-acyltransferase HCD_07070 IPR016732 Uncharacterised conserved protein UCP018688 HCD_07070 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 HCD_07075 IPR002701 Chorismate mutase HCD_07075 IPR036263 HCD_07075 HCD_07075 IPR036979 HCD_07075 HCD_07080 IPR000183 Ornithine/DAP/Arg decarboxylase HCD_07080 IPR002986 Diaminopimelate decarboxylase, LysA HCD_07080 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal HCD_07080 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal HCD_07080 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal HCD_07080 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site HCD_07080 IPR029066 PLP-binding barrel HCD_07095 IPR032307 HCD_07095 HCD_07100 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain HCD_07100 IPR016185 Pre-ATP-grasp domain HCD_07105 IPR020913 Uncharacterised protein family UPF0323 HCD_07110 IPR036249 HCD_07110 HCD_07115 IPR003329 Acylneuraminate cytidylyltransferase HCD_07115 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase HCD_07115 IPR029044 Nucleotide-diphospho-sugar transferases HCD_07120 IPR011547 Sulphate transporter HCD_07125 IPR002718 Outer membrane protein, Helicobacter HCD_07130 IPR004370 4-oxalocrotonate tautomerase HCD_07130 IPR014347 Tautomerase/MIF superfamily HCD_07130 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type HCD_07135 IPR000795 Elongation factor, GTP-binding domain HCD_07135 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 HCD_07135 IPR004535 Translation elongation factor, selenocysteine-specific HCD_07135 IPR005225 Small GTP-binding protein domain HCD_07135 IPR009000 Translation protein, beta-barrel domain HCD_07135 IPR015191 Translation elongation factor SelB, winged helix, type 3 HCD_07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07135 IPR036388 HCD_07135 HCD_07135 IPR036390 HCD_07135 HCD_07145 IPR032820 HCD_07145 HCD_07145 IPR036259 HCD_07145 HCD_07150 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase HCD_07150 IPR005814 Aminotransferase class-III HCD_07150 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_07150 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_07150 IPR015424 Pyridoxal phosphate-dependent transferase HCD_07160 IPR006073 GTP binding domain HCD_07160 IPR006074 GTP1/OBG, conserved site HCD_07160 IPR006169 GTP1/OBG domain HCD_07160 IPR014100 GTP-binding protein Obg/CgtA HCD_07160 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07160 IPR035101 HCD_07160 HCD_07160 IPR036726 HCD_07160 HCD_07165 IPR003439 ABC transporter-like HCD_07165 IPR003593 AAA+ ATPase domain HCD_07165 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal HCD_07165 IPR017871 ABC transporter, conserved site HCD_07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07170 IPR003439 ABC transporter-like HCD_07170 IPR003593 AAA+ ATPase domain HCD_07170 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal HCD_07170 IPR017871 ABC transporter, conserved site HCD_07170 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07175 IPR000515 MetI-like domain HCD_07175 IPR025966 Oligopeptide transport permease C-like, N-terminal domain HCD_07175 IPR035906 HCD_07175 HCD_07180 IPR000515 MetI-like domain HCD_07180 IPR035906 HCD_07180 HCD_07185 IPR000914 Bacterial extracellular solute-binding protein, family 5 HCD_07185 IPR030678 HCD_07185 HCD_07190 IPR001684 Ribosomal protein L27 HCD_07190 IPR018261 Ribosomal protein L27, conserved site HCD_07195 IPR001787 Ribosomal protein L21 HCD_07195 IPR018258 Ribosomal protein L21, conserved site HCD_07195 IPR028909 Ribosomal protein L21-like HCD_07195 IPR036164 HCD_07195 HCD_07200 IPR001029 Flagellin, D0/D1 domain HCD_07220 IPR000183 Ornithine/DAP/Arg decarboxylase HCD_07220 IPR002985 Arginine decarboxylase HCD_07220 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal HCD_07220 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal HCD_07220 IPR029066 PLP-binding barrel HCD_07225 IPR001296 Glycosyl transferase, family 1 HCD_07225 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain HCD_07230 IPR006683 Thioesterase superfamily HCD_07230 IPR029069 HotDog domain HCD_07250 IPR002300 Aminoacyl-tRNA synthetase, class Ia HCD_07250 IPR002547 tRNA-binding domain HCD_07250 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal HCD_07250 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding HCD_07250 IPR012340 Nucleic acid-binding, OB-fold HCD_07250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_07250 IPR014758 Methionyl-tRNA synthetase HCD_07250 IPR015413 Methionyl/Leucyl tRNA synthetase HCD_07250 IPR023457 Methionine-tRNA synthetase, type 2 HCD_07250 IPR033911 HCD_07250 HCD_07255 IPR003333 Mycolic acid cyclopropane synthase HCD_07255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_07260 IPR006685 Mechanosensitive ion channel MscS HCD_07260 IPR006686 Mechanosensitive ion channel MscS, conserved site HCD_07260 IPR010920 Like-Sm (LSM) domain HCD_07260 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 HCD_07260 IPR011066 Mechanosensitive ion channel MscS, C-terminal HCD_07260 IPR023408 HCD_07260 HCD_07265 IPR006597 Sel1-like HCD_07265 IPR011990 Tetratricopeptide-like helical domain HCD_07270 IPR000101 Gamma-glutamyltranspeptidase HCD_07270 IPR029055 Nucleophile aminohydrolases, N-terminal HCD_07275 IPR001444 Flagellar basal body rod protein, N-terminal HCD_07275 IPR002371 Flagellar hook-associated protein, FlgK HCD_07275 IPR010930 Flagellar basal-body/hook protein, C-terminal domain HCD_07285 IPR021107 Restriction endonuclease, type II, HinP1I HCD_07290 IPR001525 C-5 cytosine methyltransferase HCD_07290 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_07290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_07295 IPR031316 HCD_07295 HCD_07295 IPR035890 HCD_07295 HCD_07305 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain HCD_07310 IPR011990 Tetratricopeptide-like helical domain HCD_07310 IPR019734 Tetratricopeptide repeat HCD_07315 IPR006664 Outer membrane protein, bacterial HCD_07315 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal HCD_07315 IPR036737 HCD_07315 HCD_07320 IPR011042 Six-bladed beta-propeller, TolB-like HCD_07320 IPR011659 WD40-like Beta Propeller HCD_07330 IPR003400 Biopolymer transport protein ExbD/TolR HCD_07335 IPR002898 MotA/TolQ/ExbB proton channel HCD_07340 IPR001469 ATPase, F1 complex, delta/epsilon subunit HCD_07340 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal HCD_07340 IPR036771 HCD_07340 HCD_07345 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain HCD_07345 IPR003593 AAA+ ATPase domain HCD_07345 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain HCD_07345 IPR005722 ATPase, F1 complex, beta subunit HCD_07345 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site HCD_07345 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal HCD_07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07345 IPR036121 HCD_07345 HCD_07350 IPR000131 ATPase, F1 complex, gamma subunit HCD_07350 IPR035968 HCD_07350 HCD_07355 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain HCD_07355 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal HCD_07355 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain HCD_07355 IPR005294 ATPase, F1 complex, alpha subunit HCD_07355 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site HCD_07355 IPR023366 ATP synthase subunit alpha-like domain HCD_07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07355 IPR036121 HCD_07355 HCD_07355 IPR038376 HCD_07355 HCD_07360 IPR000711 ATPase, OSCP/delta subunit HCD_07360 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain HCD_07365 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast HCD_07365 IPR028987 F-type ATP synthase subunit B-like, membrane domain HCD_07370 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast HCD_07375 IPR003115 ParB/Sulfiredoxin HCD_07375 IPR004437 ParB/RepB/Spo0J partition protein family HCD_07375 IPR036086 HCD_07375 HCD_07380 IPR025669 AAA domain HCD_07380 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07385 IPR004143 Biotin/lipoate A/B protein ligase HCD_07385 IPR004408 Biotin--acetyl-CoA-carboxylase ligase HCD_07390 IPR002376 Formyl transferase, N-terminal HCD_07390 IPR005793 Formyl transferase, C-terminal HCD_07390 IPR005794 Methionyl-tRNA formyltransferase HCD_07390 IPR011034 Formyl transferase, C-terminal-like HCD_07390 IPR036477 HCD_07390 HCD_07390 IPR037022 HCD_07390 HCD_07395 IPR016024 Armadillo-type fold HCD_07395 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 HCD_07395 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07400 IPR019219 Protein of unknown function DUF2130 HCD_07405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_07415 IPR001943 UVR domain HCD_07415 IPR036876 HCD_07415 HCD_07420 IPR003678 Putative outer membrane protein HCD_07425 IPR001404 Heat shock protein Hsp90 family HCD_07425 IPR003594 Histidine kinase-like ATPase, C-terminal domain HCD_07425 IPR019805 Heat shock protein Hsp90, conserved site HCD_07425 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_07425 IPR020575 Heat shock protein Hsp90, N-terminal HCD_07425 IPR036890 HCD_07425 HCD_07425 IPR037196 HCD_07425 HCD_07430 IPR010446 Beta-1,4-N-acetylgalactosaminyltransferase HCD_07435 IPR005591 Nitrate reductase cytochrome c-type subunit NapB HCD_07435 IPR036280 HCD_07435 HCD_07440 IPR001650 Helicase, C-terminal HCD_07440 IPR005259 Primosomal protein n HCD_07440 IPR011545 DEAD/DEAH box helicase domain HCD_07440 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_07440 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07460 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_07460 IPR010095 Transposase IS605, OrfB, C-terminal HCD_07460 IPR021027 Transposase, putative, helix-turn-helix domain HCD_07465 IPR002686 Transposase IS200-like HCD_07465 IPR036515 HCD_07465 HCD_07470 IPR001525 C-5 cytosine methyltransferase HCD_07470 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_07470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_07470 IPR031303 HCD_07470 HCD_07475 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase HCD_07475 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_07475 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_07475 IPR015424 Pyridoxal phosphate-dependent transferase HCD_07475 IPR020026 Pseudaminic acid biosynthesis, PseC HCD_07495 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase HCD_07495 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain HCD_07495 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal HCD_07495 IPR005482 Biotin carboxylase, C-terminal HCD_07495 IPR011054 Rudiment single hybrid motif HCD_07495 IPR016185 Pre-ATP-grasp domain HCD_07500 IPR000089 Biotin/lipoyl attachment HCD_07500 IPR001249 Acetyl-CoA biotin carboxyl carrier HCD_07500 IPR011053 Single hybrid motif HCD_07505 IPR011962 Deoxycytidine triphosphate deaminase HCD_07505 IPR029054 dUTPase-like HCD_07505 IPR036157 HCD_07505 HCD_07515 IPR006700 Ribosomal RNA small subunit methyltransferase E HCD_07515 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HCD_07515 IPR029028 Alpha/beta knot methyltransferases HCD_07525 IPR001015 Ferrochelatase HCD_07525 IPR019772 Ferrochelatase, active site HCD_07530 IPR012336 Thioredoxin-like fold HCD_07530 IPR036249 HCD_07530 HCD_07535 IPR002541 Cytochrome c assembly protein HCD_07535 IPR007816 ResB-like domain HCD_07540 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_07540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_07545 IPR003812 Fido domain HCD_07545 IPR036597 HCD_07545 HCD_07565 IPR003477 mRNA interferase PemK-like protein HCD_07565 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor HCD_07570 IPR007688 Conjugal transfer, TrbL/VirB6 HCD_07580 IPR003812 Fido domain HCD_07580 IPR036597 HCD_07580 HCD_07585 IPR003688 Ti-type conjugative transfer system, TraG-like HCD_07585 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07615 IPR013610 Domain of unknown function DUF1738 HCD_07620 IPR003601 DNA topoisomerase, type IA, domain 2 HCD_07620 IPR003602 DNA topoisomerase, type IA, DNA-binding domain HCD_07620 IPR006171 Toprim domain HCD_07620 IPR013497 DNA topoisomerase, type IA, central HCD_07620 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 HCD_07620 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 HCD_07620 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 HCD_07620 IPR023405 DNA topoisomerase, type IA, core domain HCD_07640 IPR001482 Type II secretion system protein E HCD_07640 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07650 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI HCD_07655 IPR010258 Conjugal transfer, TrbG/VirB9/CagX HCD_07655 IPR038161 HCD_07655 HCD_07660 IPR007430 Bacterial virulence protein VirB8 HCD_07660 IPR032710 HCD_07660 HCD_07670 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain HCD_07670 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07690 IPR001763 Rhodanese-like domain HCD_07690 IPR036873 HCD_07690 HCD_07695 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase HCD_07695 IPR036108 HCD_07695 HCD_07700 IPR003691 Putative fluoride ion transporter CrcB HCD_07705 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related HCD_07705 IPR006638 Elongator protein 3/MiaB/NifB HCD_07705 IPR007197 Radical SAM HCD_07705 IPR023404 Radical SAM, alpha/beta horseshoe HCD_07710 IPR009056 Cytochrome c-like domain HCD_07710 IPR036909 HCD_07710 HCD_07715 IPR000086 NUDIX hydrolase domain HCD_07715 IPR015797 NUDIX hydrolase domain-like HCD_07715 IPR020084 NUDIX hydrolase, conserved site HCD_07715 IPR020476 NUDIX hydrolase HCD_07715 IPR022927 RNA pyrophosphohydrolase RppH HCD_07720 IPR001048 Aspartate/glutamate/uridylate kinase HCD_07720 IPR001341 Aspartate kinase domain HCD_07720 IPR002912 ACT domain HCD_07720 IPR005260 Aspartate kinase, monofunctional class HCD_07720 IPR018042 Aspartate kinase, conserved site HCD_07720 IPR027795 GATS-like ACT domain HCD_07720 IPR036393 HCD_07720 HCD_07725 IPR021011 DNA replication regulator, HobA HCD_07725 IPR038381 HCD_07725 HCD_07730 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07735 IPR000489 Pterin-binding HCD_07735 IPR006390 Dihydropteroate synthase HCD_07735 IPR011005 Dihydropteroate synthase-like HCD_07735 IPR016227 Dihydropteroate synthase, predicted HCD_07750 IPR002480 DAHP synthetase, class II HCD_07750 IPR013785 Aldolase-type TIM barrel HCD_07755 IPR018227 Tryptophan/tyrosine permease HCD_07760 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form HCD_07760 IPR005130 Serine dehydratase-like, alpha subunit HCD_07760 IPR005131 Serine dehydratase beta chain HCD_07760 IPR029009 Allosteric substrate binding domain HCD_07765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_07765 IPR029464 Type I restriction enzyme R protein, N-terminal domain HCD_07770 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_07770 IPR010095 Transposase IS605, OrfB, C-terminal HCD_07770 IPR021027 Transposase, putative, helix-turn-helix domain HCD_07775 IPR002686 Transposase IS200-like HCD_07775 IPR036515 HCD_07775 HCD_07780 IPR000055 Restriction endonuclease, type I, HsdS HCD_07780 IPR003356 DNA methylase, adenine-specific HCD_07780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_07790 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_07790 IPR010095 Transposase IS605, OrfB, C-terminal HCD_07790 IPR021027 Transposase, putative, helix-turn-helix domain HCD_07795 IPR002686 Transposase IS200-like HCD_07795 IPR036515 HCD_07795 HCD_07800 IPR002718 Outer membrane protein, Helicobacter HCD_07805 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II HCD_07805 IPR036188 HCD_07805 HCD_07810 IPR004714 Cytochrome oxidase maturation protein cbb3-type HCD_07815 IPR032816 HCD_07815 HCD_07820 IPR008254 Flavodoxin/nitric oxide synthase HCD_07820 IPR010086 Flavodoxin, long chain HCD_07820 IPR029039 Flavoprotein-like HCD_07825 IPR002036 Endoribonuclease YbeY HCD_07825 IPR020549 Endoribonuclease YbeY, conserved site HCD_07825 IPR023091 Metalloprotease catalytic domain, predicted HCD_07830 IPR000304 Pyrroline-5-carboxylate reductase HCD_07830 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like HCD_07830 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal HCD_07830 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain HCD_07830 IPR036291 HCD_07830 HCD_07835 IPR002718 Outer membrane protein, Helicobacter HCD_07845 IPR002686 Transposase IS200-like HCD_07845 IPR036515 HCD_07845 HCD_07850 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_07850 IPR010095 Transposase IS605, OrfB, C-terminal HCD_07850 IPR021027 Transposase, putative, helix-turn-helix domain HCD_07855 IPR004276 Glycosyl transferase, family 28 HCD_07855 IPR006009 N-acetylglucosaminyltransferase, MurG HCD_07855 IPR007235 Glycosyl transferase, family 28, C-terminal HCD_07860 IPR003775 Flagellar assembly factor FliW HCD_07860 IPR024046 Flagellar assembly factor FliW domain HCD_07865 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site HCD_07865 IPR002300 Aminoacyl-tRNA synthetase, class Ia HCD_07865 IPR002303 Valine-tRNA ligase HCD_07865 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain HCD_07865 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding HCD_07865 IPR010978 tRNA-binding arm HCD_07865 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding HCD_07865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HCD_07865 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm HCD_07865 IPR037118 HCD_07865 HCD_07870 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain HCD_07870 IPR003593 AAA+ ATPase domain HCD_07870 IPR004125 Signal recognition particle, SRP54 subunit, M-domain HCD_07870 IPR004780 Signal recognition particle protein Ffh HCD_07870 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle HCD_07870 IPR022941 Signal recognition particle, SRP54 subunit HCD_07870 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07870 IPR036225 HCD_07870 HCD_07870 IPR036891 HCD_07870 HCD_07875 IPR000307 Ribosomal protein S16 HCD_07875 IPR020592 Ribosomal protein S16, conserved site HCD_07875 IPR023803 Ribosomal protein S16 domain HCD_07880 IPR009019 K homology domain, prokaryotic type HCD_07885 IPR002676 RimM protein HCD_07885 IPR009000 Translation protein, beta-barrel domain HCD_07885 IPR011033 PRC-barrel-like HCD_07885 IPR011961 16S rRNA processing protein RimM HCD_07885 IPR027275 PRC-barrel domain HCD_07885 IPR036976 HCD_07885 HCD_07890 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria HCD_07890 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain HCD_07890 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal HCD_07890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HCD_07890 IPR029028 Alpha/beta knot methyltransferases HCD_07895 IPR001857 Ribosomal protein L19 HCD_07895 IPR008991 Translation protein SH3-like domain HCD_07895 IPR018257 Ribosomal protein L19, conserved site HCD_07895 IPR038657 HCD_07895 HCD_07905 IPR000620 Drug/metabolite transporter HCD_07910 IPR002718 Outer membrane protein, Helicobacter HCD_07935 IPR003601 DNA topoisomerase, type IA, domain 2 HCD_07935 IPR003602 DNA topoisomerase, type IA, DNA-binding domain HCD_07935 IPR006171 Toprim domain HCD_07935 IPR013497 DNA topoisomerase, type IA, central HCD_07935 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 HCD_07935 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 HCD_07935 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 HCD_07935 IPR023405 DNA topoisomerase, type IA, core domain HCD_07940 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_07940 IPR010095 Transposase IS605, OrfB, C-terminal HCD_07940 IPR021027 Transposase, putative, helix-turn-helix domain HCD_07945 IPR002686 Transposase IS200-like HCD_07945 IPR036515 HCD_07945 HCD_07950 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain HCD_07950 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_07960 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 HCD_07980 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site HCD_07980 IPR011032 GroES (chaperonin 10)-like HCD_07980 IPR013149 Alcohol dehydrogenase, C-terminal HCD_07980 IPR013154 Alcohol dehydrogenase GroES-like HCD_07980 IPR036291 HCD_07980 HCD_07985 IPR002495 Glycosyl transferase, family 8 HCD_07985 IPR029044 Nucleotide-diphospho-sugar transferases HCD_07995 IPR002718 Outer membrane protein, Helicobacter HCD_08000 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain HCD_08000 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate HCD_08000 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain HCD_08005 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate HCD_08005 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_08010 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal HCD_08010 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II HCD_08010 IPR029061 Thiamin diphosphate-binding fold HCD_08010 IPR033412 HCD_08010 HCD_08015 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding HCD_08015 IPR029061 Thiamin diphosphate-binding fold HCD_08020 IPR000362 Fumarate lyase family HCD_08020 IPR004769 Adenylosuccinate lyase HCD_08020 IPR008948 L-Aspartase-like HCD_08020 IPR019468 Adenylosuccinate lyase C-terminal HCD_08020 IPR020557 Fumarate lyase, conserved site HCD_08020 IPR022761 Fumarate lyase, N-terminal HCD_08020 IPR024083 Fumarase/histidase, N-terminal HCD_08025 IPR002718 Outer membrane protein, Helicobacter HCD_08030 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site HCD_08030 IPR002933 Peptidase M20 HCD_08030 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria HCD_08030 IPR011650 Peptidase M20, dimerisation domain HCD_08030 IPR036264 HCD_08030 HCD_08035 IPR002218 Glucose-inhibited division protein A-related HCD_08035 IPR004416 Glucose-inhibited division protein A HCD_08035 IPR020595 Glucose-inhibited division protein A-related, conserved site HCD_08035 IPR026904 GidA associated domain 3 HCD_08035 IPR036188 HCD_08035 HCD_08040 IPR001898 Sodium/sulphate symporter HCD_08045 IPR000374 Phosphatidate cytidylyltransferase HCD_08050 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase HCD_08050 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal HCD_08050 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal HCD_08050 IPR026877 DXP reductoisomerase C-terminal domain HCD_08050 IPR036169 HCD_08050 HCD_08050 IPR036291 HCD_08050 HCD_08055 IPR007730 Sporulation-related domain HCD_08055 IPR036680 HCD_08055 HCD_08065 IPR001207 Transposase, mutator type HCD_08070 IPR001207 Transposase, mutator type HCD_08090 IPR002686 Transposase IS200-like HCD_08090 IPR036515 HCD_08090 HCD_08095 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_08095 IPR010095 Transposase IS605, OrfB, C-terminal HCD_08095 IPR021027 Transposase, putative, helix-turn-helix domain HCD_08110 IPR003615 HNH nuclease HCD_08115 IPR003593 AAA+ ATPase domain HCD_08115 IPR004605 DNA helicase, Holliday junction RuvB type HCD_08115 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal HCD_08115 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal HCD_08115 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08115 IPR036388 HCD_08115 HCD_08115 IPR036390 HCD_08115 HCD_08120 IPR003700 Ketopantoate hydroxymethyltransferase HCD_08120 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain HCD_08130 IPR002718 Outer membrane protein, Helicobacter HCD_08135 IPR002718 Outer membrane protein, Helicobacter HCD_08145 IPR005526 Septum formation inhibitor MinC, C-terminal HCD_08145 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal HCD_08145 IPR036145 HCD_08145 HCD_08150 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase HCD_08150 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal HCD_08150 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal HCD_08150 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_08160 IPR000870 Homoserine kinase HCD_08160 IPR006203 GHMP kinase, ATP-binding, conserved site HCD_08160 IPR006204 GHMP kinase N-terminal domain HCD_08160 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_08160 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_08160 IPR036554 HCD_08160 HCD_08170 IPR000178 Translation initiation factor aIF-2, bacterial-like HCD_08170 IPR000795 Elongation factor, GTP-binding domain HCD_08170 IPR005225 Small GTP-binding protein domain HCD_08170 IPR006847 Translation initiation factor IF-2, N-terminal HCD_08170 IPR009000 Translation protein, beta-barrel domain HCD_08170 IPR023115 Translation initiation factor IF- 2, domain 3 HCD_08170 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08170 IPR036925 HCD_08170 HCD_08175 IPR000238 Ribosome-binding factor A HCD_08175 IPR015946 K homology domain-like, alpha/beta HCD_08175 IPR020053 Ribosome-binding factor A, conserved site HCD_08175 IPR023799 Ribosome-binding factor A domain HCD_08180 IPR003728 Ribosome maturation factor RimP HCD_08180 IPR028989 Ribosome maturation factor RimP, N-terminal HCD_08180 IPR028998 Ribosome maturation factor RimP, C-terminal HCD_08180 IPR035956 HCD_08180 HCD_08180 IPR036847 HCD_08180 HCD_08185 IPR002686 Transposase IS200-like HCD_08185 IPR036515 HCD_08185 HCD_08195 IPR010149 CRISPR-associated protein, TM1810 C-terminal HCD_08215 IPR019267 CRISPR-associated protein Cas6 domain HCD_08235 IPR001915 Peptidase M48 HCD_08235 IPR032456 HCD_08235 HCD_08240 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_08240 IPR004556 Modification methylase HemK HCD_08240 IPR007848 Methyltransferase small domain HCD_08240 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific HCD_08240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08245 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase HCD_08245 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal HCD_08245 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain HCD_08245 IPR014362 Glutamate dehydrogenase HCD_08245 IPR033524 HCD_08245 HCD_08245 IPR036291 HCD_08245 HCD_08250 IPR005247 YbhB/YbcL HCD_08250 IPR008914 Phosphatidylethanolamine-binding protein PEBP HCD_08250 IPR036610 HCD_08250 HCD_08260 IPR000192 Aminotransferase class V domain HCD_08260 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 HCD_08260 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 HCD_08260 IPR015424 Pyridoxal phosphate-dependent transferase HCD_08260 IPR016454 Cysteine desulfurase, NifS HCD_08260 IPR017773 Cysteine desulfurase, NifS, proteobacteria HCD_08260 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site HCD_08265 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal HCD_08265 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal HCD_08265 IPR007419 BFD-like [2Fe-2S]-binding domain HCD_08265 IPR016217 Nitrogen fixation, NifU HCD_08265 IPR034904 HCD_08265 HCD_08270 IPR010985 Ribbon-helix-helix HCD_08270 IPR013321 Arc-type ribbon-helix-helix HCD_08270 IPR031895 HCD_08270 HCD_08275 IPR003593 AAA+ ATPase domain HCD_08275 IPR004504 DNA repair protein RadA HCD_08275 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HCD_08275 IPR020568 Ribosomal protein S5 domain 2-type fold HCD_08275 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08280 IPR002569 Peptide methionine sulphoxide reductase MsrA HCD_08280 IPR002579 Peptide methionine sulphoxide reductase MrsB HCD_08280 IPR011057 Mss4-like HCD_08280 IPR036509 HCD_08280 HCD_08285 IPR005094 Endonuclease relaxase, MobA/VirD2 HCD_08290 IPR008687 Bacterial mobilisation HCD_08325 IPR002686 Transposase IS200-like HCD_08325 IPR036515 HCD_08325 HCD_08330 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_08330 IPR010095 Transposase IS605, OrfB, C-terminal HCD_08330 IPR021027 Transposase, putative, helix-turn-helix domain HCD_08335 IPR003688 Ti-type conjugative transfer system, TraG-like HCD_08335 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08340 IPR003812 Fido domain HCD_08340 IPR036597 HCD_08340 HCD_08355 IPR000330 SNF2-related HCD_08355 IPR001650 Helicase, C-terminal HCD_08355 IPR011639 Restriction modification methylase Eco57I HCD_08355 IPR014001 Helicase, superfamily 1/2, ATP-binding domain HCD_08355 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08360 IPR002104 Integrase, catalytic HCD_08360 IPR011010 DNA breaking-rejoining enzyme, catalytic core HCD_08360 IPR013762 Integrase-like, catalytic core HCD_08375 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain HCD_08375 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08410 IPR002718 Outer membrane protein, Helicobacter HCD_08415 IPR004113 FAD-linked oxidase, C-terminal HCD_08415 IPR006094 FAD linked oxidase, N-terminal HCD_08415 IPR009051 Alpha-helical ferredoxin HCD_08415 IPR016164 FAD-linked oxidase-like, C-terminal HCD_08415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HCD_08415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HCD_08415 IPR036318 HCD_08415 HCD_08420 IPR001441 Decaprenyl diphosphate synthase-like HCD_08420 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site HCD_08420 IPR036424 HCD_08420 HCD_08425 IPR003439 ABC transporter-like HCD_08425 IPR003593 AAA+ ATPase domain HCD_08425 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08430 IPR002718 Outer membrane protein, Helicobacter HCD_08435 IPR006597 Sel1-like HCD_08435 IPR011990 Tetratricopeptide-like helical domain HCD_08435 IPR019734 Tetratricopeptide repeat HCD_08440 IPR000887 KDPG/KHG aldolase HCD_08440 IPR013785 Aldolase-type TIM barrel HCD_08440 IPR031337 HCD_08440 HCD_08445 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase HCD_08445 IPR004786 6-phosphogluconate dehydratase HCD_08445 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site HCD_08445 IPR037237 HCD_08445 HCD_08450 IPR001282 Glucose-6-phosphate dehydrogenase HCD_08450 IPR019796 Glucose-6-phosphate dehydrogenase, active site HCD_08450 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding HCD_08450 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal HCD_08450 IPR036291 HCD_08450 HCD_08455 IPR005900 6-phosphogluconolactonase, DevB-type HCD_08455 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase HCD_08455 IPR037171 HCD_08455 HCD_08460 IPR003836 Glucokinase HCD_08465 IPR001525 C-5 cytosine methyltransferase HCD_08465 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_08465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08475 IPR011701 Major facilitator superfamily HCD_08475 IPR036259 HCD_08475 HCD_08480 IPR001672 Phosphoglucose isomerase (PGI) HCD_08480 IPR018189 Phosphoglucose isomerase, conserved site HCD_08480 IPR023096 Phosphoglucose isomerase, C-terminal HCD_08485 IPR003678 Putative outer membrane protein HCD_08490 IPR003706 Carbon starvation protein CstA HCD_08490 IPR025299 CstA C-terminal domain HCD_08495 IPR000515 MetI-like domain HCD_08495 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family HCD_08495 IPR035906 HCD_08495 HCD_08500 IPR000515 MetI-like domain HCD_08500 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family HCD_08500 IPR035906 HCD_08500 HCD_08505 IPR003439 ABC transporter-like HCD_08505 IPR003593 AAA+ ATPase domain HCD_08505 IPR017871 ABC transporter, conserved site HCD_08505 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08505 IPR030679 HCD_08505 HCD_08510 IPR001638 Extracellular solute-binding protein, family 3 HCD_08530 IPR005964 Bacterial glucose/galactose transporter HCD_08530 IPR011701 Major facilitator superfamily HCD_08530 IPR036259 HCD_08530 HCD_08535 IPR006043 Xanthine/uracil/vitamin C permease HCD_08550 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_08550 IPR007848 Methyltransferase small domain HCD_08550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08555 IPR010918 AIR synthase-related protein, C-terminal domain HCD_08555 IPR011854 Hydrogenase expression/formation protein HypE HCD_08555 IPR016188 PurM, N-terminal-like HCD_08555 IPR036676 HCD_08555 HCD_08555 IPR036921 HCD_08555 HCD_08560 IPR001792 Acylphosphatase-like domain HCD_08560 IPR004421 Carbamoyltransferase, HypF-type HCD_08560 IPR006070 YrdC-like domain HCD_08560 IPR011125 Zinc finger, HypF-type HCD_08560 IPR017945 DHBP synthase RibB-like alpha/beta domain HCD_08560 IPR017968 Acylphosphatase, conserved site HCD_08560 IPR036046 HCD_08560 HCD_08565 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type HCD_08570 IPR001091 Restriction/modification DNA-methylase HCD_08570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_08570 IPR002941 DNA methylase N-4/N-6 HCD_08570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08575 IPR001525 C-5 cytosine methyltransferase HCD_08575 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_08575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08575 IPR031303 HCD_08575 HCD_08590 IPR000905 Gcp-like domain HCD_08590 IPR017860 Peptidase M22, conserved site HCD_08590 IPR017861 Kae1/YgjD family HCD_08590 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD HCD_08595 IPR002052 DNA methylase, N-6 adenine-specific, conserved site HCD_08595 IPR012263 Adenine modification methylase, M.EcoRV-type HCD_08595 IPR012327 D12 class N6 adenine-specific DNA methyltransferase HCD_08595 IPR023095 Adenine-specific methyltransferase, domain 2 HCD_08595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08605 IPR001444 Flagellar basal body rod protein, N-terminal HCD_08605 IPR010930 Flagellar basal-body/hook protein, C-terminal domain HCD_08605 IPR012834 Flagellar basal-body rod FlgG HCD_08605 IPR019776 Flagellar basal body rod protein, conserved site HCD_08605 IPR020013 Fagellar hook-basal body protein, FlgE/F/G HCD_08605 IPR037925 HCD_08605 HCD_08615 IPR024445 Transposase, ISXO2-like HCD_08625 IPR001525 C-5 cytosine methyltransferase HCD_08625 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_08625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08625 IPR031303 HCD_08625 HCD_08630 IPR001525 C-5 cytosine methyltransferase HCD_08630 IPR018117 DNA methylase, C-5 cytosine-specific, active site HCD_08630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like HCD_08630 IPR031303 HCD_08630 HCD_08640 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 HCD_08640 IPR025217 Domain of unknown function DUF3944 HCD_08729 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_08729 IPR010095 Transposase IS605, OrfB, C-terminal HCD_08729 IPR021027 Transposase, putative, helix-turn-helix domain HCD_08734 IPR002686 Transposase IS200-like HCD_08734 IPR036515 HCD_08734 HCD_08744 IPR008687 Bacterial mobilisation HCD_08749 IPR005094 Endonuclease relaxase, MobA/VirD2 HCD_08759 IPR000525 Initiator Rep protein HCD_08759 IPR036388 HCD_08759 HCD_08759 IPR036390 HCD_08759 HCD_08764 IPR001959 Transposase, probable, IS891/IS1136/IS1341 HCD_08764 IPR010095 Transposase IS605, OrfB, C-terminal HCD_08764 IPR021027 Transposase, putative, helix-turn-helix domain HCD_08769 IPR002686 Transposase IS200-like HCD_08769 IPR036515 HCD_08769 HCD_08779 IPR000525 Initiator Rep protein HCD_08779 IPR036388 HCD_08779 HCD_08779 IPR036390 HCD_08779 HCD_08789 IPR027417 P-loop containing nucleoside triphosphate hydrolase HCD_08799 IPR008687 Bacterial mobilisation