locus-tag class description CV728_00005 IPR003593 AAA+ ATPase domain CV728_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CV728_00005 IPR020591 Chromosomal replication control, initiator DnaA-like CV728_00005 IPR038454 DnaA, N-terminal domain superfamily CV728_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00005 IPR010921 Trp repressor/replication initiator CV728_00005 IPR001957 Chromosomal replication control, initiator DnaA CV728_00005 IPR013317 Chromosomal replication initiator protein DnaA CV728_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal CV728_00020 IPR005135 Endonuclease/exonuclease/phosphatase CV728_00020 IPR004808 AP endonuclease 1 CV728_00020 IPR020847 AP endonuclease 1, binding site CV728_00020 IPR020848 AP endonuclease 1, conserved site CV728_00020 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CV728_00035 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_00035 IPR001650 Helicase, C-terminal CV728_00035 IPR006935 Helicase/UvrB, N-terminal CV728_00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00040 IPR002941 DNA methylase N-4/N-6 CV728_00040 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CV728_00040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_00040 IPR041405 Type III R-M EcoP15I, C-terminal CV728_00040 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_00045 IPR006935 Helicase/UvrB, N-terminal CV728_00045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00045 IPR014883 VRR-NUC domain CV728_00060 IPR025272 Domain of unknown function DUF4065 CV728_00070 IPR030842 Transcription termination/antitermination protein NusA, bacterial CV728_00070 IPR036555 NusA, N-terminal domain superfamily CV728_00070 IPR022967 RNA-binding domain, S1 CV728_00070 IPR012340 Nucleic acid-binding, OB-fold CV728_00070 IPR013735 Transcription factor NusA, N-terminal CV728_00070 IPR010213 Transcription termination factor NusA CV728_00070 IPR025249 KH domain, NusA-like CV728_00070 IPR003029 S1 domain CV728_00070 IPR009019 K homology domain superfamily, prokaryotic type CV728_00070 IPR015946 K homology domain-like, alpha/beta CV728_00075 IPR018319 L-seryl-tRNA selenium transferase-like CV728_00075 IPR004534 L-seryl-tRNA(Sec) selenium transferase CV728_00075 IPR015424 Pyridoxal phosphate-dependent transferase CV728_00075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_00095 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CV728_00100 IPR013783 Immunoglobulin-like fold CV728_00100 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CV728_00100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CV728_00100 IPR032879 FixG, C-terminal immunoglobulin-like domain CV728_00100 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG CV728_00105 IPR032095 Saccharopine dehydrogenase, C-terminal CV728_00105 IPR005097 Saccharopine dehydrogenase, NADP binding domain CV728_00105 IPR036291 NAD(P)-binding domain superfamily CV728_00110 IPR004445 Sodium/glutamate symport carrier protein GltS CV728_00115 IPR002125 Cytidine and deoxycytidylate deaminase domain CV728_00115 IPR024072 Dihydrofolate reductase-like domain superfamily CV728_00115 IPR004794 Riboflavin biosynthesis protein RibD CV728_00115 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CV728_00115 IPR016192 APOBEC/CMP deaminase, zinc-binding CV728_00115 IPR016193 Cytidine deaminase-like CV728_00120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_00120 IPR007848 Methyltransferase small domain CV728_00120 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_00120 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase CV728_00125 IPR017969 Heavy-metal-associated, conserved site CV728_00125 IPR023214 HAD superfamily CV728_00125 IPR036412 HAD-like superfamily CV728_00125 IPR008250 P-type ATPase, A domain superfamily CV728_00125 IPR018303 P-type ATPase, phosphorylation site CV728_00125 IPR023299 P-type ATPase, cytoplasmic domain N CV728_00125 IPR006121 Heavy metal-associated domain, HMA CV728_00125 IPR036163 Heavy metal-associated domain superfamily CV728_00125 IPR027256 P-type ATPase, subfamily IB CV728_00125 IPR023298 P-type ATPase, transmembrane domain superfamily CV728_00125 IPR001757 P-type ATPase CV728_00150 IPR036416 Peptidyl-tRNA hydrolase superfamily CV728_00150 IPR018171 Peptidyl-tRNA hydrolase, conserved site CV728_00150 IPR001328 Peptidyl-tRNA hydrolase CV728_00155 IPR020057 Ribosomal protein L25, beta domain CV728_00155 IPR001021 Ribosomal protein L25, long-form CV728_00155 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CV728_00155 IPR029751 Ribosomal protein L25 CV728_00155 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CV728_00155 IPR037121 Ribosomal protein L25, C-terminal CV728_00160 IPR018225 Transaldolase, active site CV728_00160 IPR013785 Aldolase-type TIM barrel CV728_00160 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CV728_00160 IPR004732 Transaldolase type 2 CV728_00165 IPR036565 Mur-like, catalytic domain superfamily CV728_00165 IPR018109 Folylpolyglutamate synthetase, conserved site CV728_00165 IPR004101 Mur ligase, C-terminal CV728_00165 IPR013221 Mur ligase, central CV728_00165 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CV728_00165 IPR036615 Mur ligase, C-terminal domain superfamily CV728_00175 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CV728_00175 IPR034904 Fe-S cluster assembly domain superfamily CV728_00180 IPR001204 Phosphate transporter CV728_00185 IPR002550 CNNM, transmembrane domain CV728_00185 IPR000644 CBS domain CV728_00185 IPR005170 Transporter-associated domain CV728_00185 IPR016169 FAD-binding, type PCMH, subdomain 2 CV728_00185 IPR036318 FAD-binding, type PCMH-like superfamily CV728_00195 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CV728_00210 IPR035647 EF-G domain III/V-like CV728_00210 IPR023582 Impact family CV728_00210 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_00210 IPR015796 Impact family, bacterial/archaeal CV728_00210 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CV728_00210 IPR001498 Impact, N-terminal CV728_00210 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CV728_00210 IPR036956 Impact, N-terminal domain superfamily CV728_00220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_00220 IPR004033 UbiE/COQ5 methyltransferase CV728_00220 IPR023576 UbiE/COQ5 methyltransferase, conserved site CV728_00225 IPR003761 Exonuclease VII, small subunit CV728_00225 IPR037004 Exonuclease VII, small subunit superfamily CV728_00235 IPR006195 Aminoacyl-tRNA synthetase, class II CV728_00235 IPR002317 Serine-tRNA ligase, type1 CV728_00235 IPR015866 Serine-tRNA synthetase, type1, N-terminal CV728_00235 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CV728_00235 IPR033729 Serine-tRNA ligase catalytic core domain CV728_00235 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CV728_00235 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CV728_00255 IPR004507 Flavin prenyltransferase UbiX-like CV728_00255 IPR003382 Flavoprotein CV728_00255 IPR036551 Flavin prenyltransferase-like CV728_00260 IPR004821 Cytidyltransferase-like domain CV728_00260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_00260 IPR001980 Phosphopantetheine adenylyltransferase CV728_00265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00265 IPR039430 Thymidylate kinase-like domain CV728_00265 IPR018094 Thymidylate kinase CV728_00265 IPR018095 Thymidylate kinase, conserved site CV728_00285 IPR018117 DNA methylase, C-5 cytosine-specific, active site CV728_00285 IPR001525 C-5 cytosine methyltransferase CV728_00285 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CV728_00285 IPR001387 Cro/C1-type helix-turn-helix domain CV728_00285 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CV728_00285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_00300 IPR002562 3'-5' exonuclease domain CV728_00300 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CV728_00300 IPR019760 DNA-directed DNA polymerase, family A, conserved site CV728_00300 IPR001098 DNA-directed DNA polymerase, family A, palm domain CV728_00300 IPR020045 DNA polymerase I-like, H3TH domain CV728_00300 IPR018320 DNA polymerase 1 CV728_00300 IPR002298 DNA polymerase A CV728_00300 IPR029060 PIN-like domain superfamily CV728_00300 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CV728_00300 IPR012337 Ribonuclease H-like superfamily CV728_00300 IPR036397 Ribonuclease H superfamily CV728_00300 IPR008918 Helix-hairpin-helix motif, class 2 CV728_00300 IPR002421 5'-3' exonuclease, N-terminal CV728_00310 IPR036038 Aminotransferase-like, PLP-dependent enzymes CV728_00310 IPR005786 Branched-chain amino acid aminotransferase II CV728_00310 IPR033939 Branched-chain aminotransferase CV728_00310 IPR001544 Aminotransferase class IV CV728_00310 IPR018300 Aminotransferase, class IV, conserved site CV728_00320 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CV728_00320 IPR030802 ABC transporter permease MalE CV728_00325 IPR018449 NIL domain CV728_00325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00325 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CV728_00325 IPR003593 AAA+ ATPase domain CV728_00325 IPR026253 Methionine import ATP-binding protein MetN CV728_00325 IPR003439 ABC transporter-like CV728_00325 IPR017871 ABC transporter, conserved site CV728_00325 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CV728_00345 IPR009056 Cytochrome c-like domain CV728_00345 IPR004852 Di-haem cytochrome c peroxidase CV728_00345 IPR036909 Cytochrome c-like domain superfamily CV728_00345 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CV728_00350 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CV728_00350 IPR040982 DNA polymerase III alpha subunit finger domain CV728_00350 IPR029460 DNA polymerase, helix-hairpin-helix motif CV728_00350 IPR004013 PHP domain CV728_00350 IPR004805 DNA polymerase III, alpha subunit CV728_00350 IPR003141 Polymerase/histidinol phosphatase, N-terminal CV728_00350 IPR016195 Polymerase/histidinol phosphatase-like CV728_00350 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CV728_00355 IPR002942 RNA-binding S4 domain CV728_00355 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CV728_00355 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CV728_00355 IPR036986 RNA-binding S4 domain superfamily CV728_00355 IPR020103 Pseudouridine synthase, catalytic domain superfamily CV728_00355 IPR006145 Pseudouridine synthase, RsuA/RluA CV728_00355 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CV728_00360 IPR005746 Thioredoxin CV728_00360 IPR013766 Thioredoxin domain CV728_00360 IPR036249 Thioredoxin-like superfamily CV728_00360 IPR017937 Thioredoxin, conserved site CV728_00370 IPR024952 Lipoprotein LPP20-like CV728_00370 IPR002217 Lipoprotein LPP20 CV728_00400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00400 IPR027368 tRNA modification GTPase MnmE domain 2 CV728_00400 IPR004520 tRNA modification GTPase MnmE CV728_00400 IPR006073 GTP binding domain CV728_00400 IPR025867 MnmE, helical domain CV728_00400 IPR005225 Small GTP-binding protein domain CV728_00400 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CV728_00400 IPR018948 GTP-binding protein TrmE, N-terminal CV728_00400 IPR031168 TrmE-type guanine nucleotide-binding domain CV728_00410 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CV728_00410 IPR038210 Membrane insertase YidC, periplasmic domain CV728_00410 IPR019998 Membrane insertase YidC CV728_00410 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CV728_00410 IPR028053 Membrane insertase YidC, N-terminal CV728_00415 IPR002696 Putative membrane protein insertion efficiency factor CV728_00420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_00420 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_00420 IPR000100 Ribonuclease P CV728_00420 IPR020539 Ribonuclease P, conserved site CV728_00425 IPR020939 Ribosomal protein L34, conserved site CV728_00425 IPR000271 Ribosomal protein L34 CV728_00430 IPR003400 Biopolymer transport protein ExbD/TolR CV728_00435 IPR014172 TonB-system energizer ExbB type-2 CV728_00435 IPR002898 MotA/TolQ/ExbB proton channel CV728_00440 IPR020081 SsrA-binding protein, conserved site CV728_00440 IPR000037 SsrA-binding protein CV728_00440 IPR023620 Small protein B CV728_00445 IPR036554 GHMP kinase, C-terminal domain superfamily CV728_00445 IPR006204 GHMP kinase N-terminal domain CV728_00445 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_00445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_00445 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CV728_00450 IPR036107 Carbon storage regulator superfamily CV728_00450 IPR003751 Translational regulator CsrA CV728_00455 IPR029000 Cyclophilin-like domain superfamily CV728_00455 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CV728_00455 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CV728_00455 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CV728_00500 IPR036477 Formyl transferase, N-terminal domain superfamily CV728_00500 IPR002376 Formyl transferase, N-terminal CV728_00500 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CV728_00500 IPR002912 ACT domain CV728_00500 IPR004810 Formyltetrahydrofolate deformylase CV728_00520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_00520 IPR011530 Ribosomal RNA adenine dimethylase CV728_00520 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CV728_00520 IPR023165 rRNA adenine dimethylase-like CV728_00520 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CV728_00520 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CV728_00525 IPR001279 Metallo-beta-lactamase CV728_00525 IPR001587 Ribonuclease J, conserved site CV728_00525 IPR041636 Ribonuclease J, C-terminal CV728_00525 IPR030854 Ribonuclease J, bacteria CV728_00525 IPR042173 Ribonuclease J, domain 2 CV728_00525 IPR004613 Ribonuclease J CV728_00525 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CV728_00525 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CV728_00530 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CV728_00530 IPR000644 CBS domain CV728_00530 IPR035474 KpsF-like, SIS domain CV728_00530 IPR001347 Sugar isomerase (SIS) CV728_00535 IPR013785 Aldolase-type TIM barrel CV728_00535 IPR040072 Methyltransferase (Class A) CV728_00535 IPR027492 Dual-specificity RNA methyltransferase RlmN CV728_00535 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CV728_00535 IPR007197 Radical SAM CV728_00555 IPR002942 RNA-binding S4 domain CV728_00555 IPR036986 RNA-binding S4 domain superfamily CV728_00555 IPR025490 RNA-binding protein, HP1423 type CV728_00560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_00560 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CV728_00560 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CV728_00560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CV728_00560 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CV728_00560 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CV728_00560 IPR002301 Isoleucine-tRNA ligase CV728_00560 IPR023585 Isoleucine-tRNA ligase, type 1 CV728_00560 IPR002300 Aminoacyl-tRNA synthetase, class Ia CV728_00565 IPR001482 Type II/IV secretion system protein CV728_00565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00565 IPR014149 Conjugative transfer, TrbB CV728_00570 IPR003593 AAA+ ATPase domain CV728_00570 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CV728_00570 IPR032463 ATPase, type III secretion system, FliI CV728_00570 IPR005714 ATPase, type III secretion system, FliI/YscN CV728_00570 IPR040627 T3SS EscN ATPase, C-terminal CV728_00570 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CV728_00570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_00575 IPR006305 Flagellar biosynthesis protein FliQ CV728_00575 IPR002191 Bacterial export protein family 3 CV728_00580 IPR036318 FAD-binding, type PCMH-like superfamily CV728_00580 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CV728_00580 IPR016169 FAD-binding, type PCMH, subdomain 2 CV728_00580 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CV728_00580 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CV728_00595 IPR029045 ClpP/crotonase-like domain superfamily CV728_00595 IPR005151 Tail specific protease CV728_00595 IPR004447 C-terminal-processing peptidase S41A CV728_00595 IPR036034 PDZ superfamily CV728_00595 IPR001478 PDZ domain CV728_00605 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CV728_00605 IPR002123 Phospholipid/glycerol acyltransferase CV728_00610 IPR005122 Uracil-DNA glycosylase-like CV728_00610 IPR002043 Uracil-DNA glycosylase family 1 CV728_00610 IPR036895 Uracil-DNA glycosylase-like domain superfamily CV728_00610 IPR018085 Uracil-DNA glycosylase, active site CV728_00620 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CV728_00620 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CV728_00620 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CV728_00620 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CV728_00620 IPR036291 NAD(P)-binding domain superfamily CV728_00620 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CV728_00625 IPR001576 Phosphoglycerate kinase CV728_00625 IPR015824 Phosphoglycerate kinase, N-terminal CV728_00625 IPR015911 Phosphoglycerate kinase, conserved site CV728_00625 IPR036043 Phosphoglycerate kinase superfamily CV728_00630 IPR004488 Magnesium/cobalt transport protein CorA CV728_00630 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CV728_00635 IPR005496 Integral membrane protein TerC CV728_00645 IPR003538 Gram-negative bacterial TonB protein CV728_00645 IPR006260 TonB/TolA, C-terminal CV728_00645 IPR037682 TonB, C-terminal CV728_00650 IPR014171 TonB system transport protein ExbD type-2 CV728_00650 IPR003400 Biopolymer transport protein ExbD/TolR CV728_00655 IPR002898 MotA/TolQ/ExbB proton channel CV728_00655 IPR014172 TonB-system energizer ExbB type-2 CV728_00665 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CV728_00665 IPR013321 Arc-type ribbon-helix-helix CV728_00665 IPR002145 Ribbon-helix-helix protein, CopG CV728_00665 IPR022988 Nickel-responsive transcriptional regulator NikR CV728_00665 IPR010985 Ribbon-helix-helix CV728_00665 IPR014864 Transcription factor, NikR, nickel binding C-terminal CV728_00670 IPR004821 Cytidyltransferase-like domain CV728_00670 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CV728_00670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_00680 IPR004506 tRNA-specific 2-thiouridylase CV728_00680 IPR023382 Adenine nucleotide alpha hydrolase-like domains CV728_00680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_00690 IPR012724 Chaperone DnaJ CV728_00690 IPR002939 Chaperone DnaJ, C-terminal CV728_00690 IPR001623 DnaJ domain CV728_00690 IPR008971 HSP40/DnaJ peptide-binding CV728_00690 IPR036869 Chaperone J-domain superfamily CV728_00690 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CV728_00690 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CV728_00695 IPR011606 Branched-chain amino acid transport, permease CV728_00695 IPR004471 Branched-chain amino acid transport, AzlC CV728_00700 IPR008407 Branched-chain amino acid transport, AzlD CV728_00705 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CV728_00705 IPR001036 Acriflavin resistance protein CV728_00705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CV728_00710 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CV728_00710 IPR006143 RND efflux pump, membrane fusion protein CV728_00725 IPR024083 Fumarase/histidase, N-terminal CV728_00725 IPR005677 Fumarate hydratase, class II CV728_00725 IPR018951 Fumarase C, C-terminal CV728_00725 IPR020557 Fumarate lyase, conserved site CV728_00725 IPR008948 L-Aspartase-like CV728_00725 IPR000362 Fumarate lyase family CV728_00725 IPR022761 Fumarate lyase, N-terminal CV728_00735 IPR001352 Ribonuclease HII/HIII CV728_00735 IPR024567 Ribonuclease HII/HIII domain CV728_00735 IPR022898 Ribonuclease HII CV728_00735 IPR036397 Ribonuclease H superfamily CV728_00735 IPR012337 Ribonuclease H-like superfamily CV728_00750 IPR036838 Ribosomal protein S10 domain superfamily CV728_00750 IPR001848 Ribosomal protein S10 CV728_00750 IPR018268 Ribosomal protein S10, conserved site CV728_00750 IPR027486 Ribosomal protein S10 domain CV728_00755 IPR000597 Ribosomal protein L3 CV728_00755 IPR019927 Ribosomal protein L3, bacterial/organelle-type CV728_00755 IPR009000 Translation protein, beta-barrel domain superfamily CV728_00760 IPR013005 50S ribosomal protein uL4 CV728_00760 IPR023574 Ribosomal protein L4 domain superfamily CV728_00760 IPR002136 Ribosomal protein L4/L1e CV728_00765 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CV728_00765 IPR012678 Ribosomal protein L23/L15e core domain superfamily CV728_00765 IPR013025 Ribosomal protein L25/L23 CV728_00770 IPR022666 Ribosomal Proteins L2, RNA binding domain CV728_00770 IPR005880 Ribosomal protein L2, bacterial/organellar-type CV728_00770 IPR012340 Nucleic acid-binding, OB-fold CV728_00770 IPR014722 Ribosomal protein L2, domain 2 CV728_00770 IPR002171 Ribosomal protein L2 CV728_00770 IPR008991 Translation protein SH3-like domain superfamily CV728_00770 IPR014726 Ribosomal protein L2, domain 3 CV728_00770 IPR022671 Ribosomal protein L2, conserved site CV728_00770 IPR022669 Ribosomal protein L2, C-terminal CV728_00775 IPR020934 Ribosomal protein S19 conserved site CV728_00775 IPR002222 Ribosomal protein S19/S15 CV728_00775 IPR005732 Ribosomal protein S19, bacterial-type CV728_00775 IPR023575 Ribosomal protein S19, superfamily CV728_00780 IPR001063 Ribosomal protein L22/L17 CV728_00780 IPR018260 Ribosomal protein L22/L17, conserved site CV728_00780 IPR036394 Ribosomal protein L22/L17 superfamily CV728_00780 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CV728_00785 IPR015946 K homology domain-like, alpha/beta CV728_00785 IPR004044 K Homology domain, type 2 CV728_00785 IPR004087 K Homology domain CV728_00785 IPR009019 K homology domain superfamily, prokaryotic type CV728_00785 IPR018280 Ribosomal protein S3, conserved site CV728_00785 IPR005704 Ribosomal protein S3, bacterial-type CV728_00785 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CV728_00785 IPR001351 Ribosomal protein S3, C-terminal CV728_00790 IPR020798 Ribosomal protein L16, conserved site CV728_00790 IPR000114 Ribosomal protein L16 CV728_00790 IPR036920 Ribosomal protein L10e/L16 superfamily CV728_00790 IPR016180 Ribosomal protein L10e/L16 CV728_00795 IPR018254 Ribosomal protein L29, conserved site CV728_00795 IPR036049 Ribosomal protein L29/L35 superfamily CV728_00795 IPR001854 Ribosomal protein L29/L35 CV728_00800 IPR019984 30S ribosomal protein S17 CV728_00800 IPR012340 Nucleic acid-binding, OB-fold CV728_00800 IPR019979 Ribosomal protein S17, conserved site CV728_00800 IPR000266 Ribosomal protein S17/S11 CV728_00805 IPR005745 Ribosomal protein L14P, bacterial-type CV728_00805 IPR036853 Ribosomal protein L14 superfamily CV728_00805 IPR000218 Ribosomal protein L14P CV728_00805 IPR019972 Ribosomal protein L14P, conserved site CV728_00810 IPR008991 Translation protein SH3-like domain superfamily CV728_00810 IPR005825 Ribosomal protein L24/L26, conserved site CV728_00810 IPR005824 KOW CV728_00810 IPR003256 Ribosomal protein L24 CV728_00810 IPR041988 Ribosomal Protein L26/L24, KOW domain CV728_00815 IPR031310 Ribosomal protein L5, N-terminal CV728_00815 IPR022803 Ribosomal protein L5 domain superfamily CV728_00815 IPR020929 Ribosomal protein L5, conserved site CV728_00815 IPR031309 Ribosomal protein L5, C-terminal CV728_00815 IPR020930 Ribosomal protein L5, bacterial-type CV728_00815 IPR002132 Ribosomal protein L5 CV728_00820 IPR023053 Ribosomal protein S14, type Z CV728_00820 IPR018271 Ribosomal protein S14, conserved site CV728_00820 IPR001209 Ribosomal protein S14 CV728_00825 IPR000630 Ribosomal protein S8 CV728_00825 IPR035987 Ribosomal protein S8 superfamily CV728_00830 IPR000702 Ribosomal protein L6 CV728_00830 IPR020040 Ribosomal protein L6, alpha-beta domain CV728_00830 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CV728_00830 IPR002358 Ribosomal protein L6, conserved site CV728_00830 IPR019906 Ribosomal protein L6, bacterial-type CV728_00835 IPR004389 Ribosomal protein L18, bacterial-type CV728_00835 IPR005484 Ribosomal protein L18 CV728_00840 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_00840 IPR013810 Ribosomal protein S5, N-terminal CV728_00840 IPR018192 Ribosomal protein S5, N-terminal, conserved site CV728_00840 IPR005324 Ribosomal protein S5, C-terminal CV728_00840 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_00840 IPR005712 Ribosomal protein S5, bacterial-type CV728_00840 IPR000851 Ribosomal protein S5 CV728_00845 IPR030878 Ribosomal protein L15 CV728_00845 IPR036227 Ribosomal L18e/L15P superfamily CV728_00845 IPR005749 Ribosomal protein L15, bacterial-type CV728_00845 IPR021131 Ribosomal protein L18e/L15P CV728_00850 IPR023201 SecY domain superfamily CV728_00850 IPR030659 SecY conserved site CV728_00850 IPR002208 SecY/SEC61-alpha family CV728_00850 IPR026593 Protein translocase subunit SecY CV728_00855 IPR036005 Creatinase/aminopeptidase-like CV728_00855 IPR000994 Peptidase M24 CV728_00855 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CV728_00855 IPR001714 Peptidase M24, methionine aminopeptidase CV728_00860 IPR012340 Nucleic acid-binding, OB-fold CV728_00860 IPR004368 Translation initiation factor IF-1 CV728_00860 IPR022967 RNA-binding domain, S1 CV728_00860 IPR006196 RNA-binding domain, S1, IF1 type CV728_00865 IPR000473 Ribosomal protein L36 CV728_00865 IPR035977 Ribosomal protein L36 superfamily CV728_00870 IPR019980 Ribosomal protein S13, bacterial-type CV728_00870 IPR027437 30s ribosomal protein S13, C-terminal CV728_00870 IPR001892 Ribosomal protein S13 CV728_00870 IPR010979 Ribosomal protein S13-like, H2TH CV728_00870 IPR018269 Ribosomal protein S13, conserved site CV728_00875 IPR019981 Ribosomal protein S11, bacterial-type CV728_00875 IPR001971 Ribosomal protein S11 CV728_00875 IPR036967 Ribosomal protein S11 superfamily CV728_00875 IPR018102 Ribosomal S11, conserved site CV728_00880 IPR018079 Ribosomal protein S4, conserved site CV728_00880 IPR002942 RNA-binding S4 domain CV728_00880 IPR001912 Ribosomal protein S4/S9, N-terminal CV728_00880 IPR022801 Ribosomal protein S4/S9 CV728_00880 IPR005709 Ribosomal protein S4, bacterial-type CV728_00880 IPR036986 RNA-binding S4 domain superfamily CV728_00885 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CV728_00885 IPR011260 RNA polymerase, alpha subunit, C-terminal CV728_00885 IPR011262 DNA-directed RNA polymerase, insert domain CV728_00885 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CV728_00885 IPR036603 RNA polymerase, RBP11-like subunit CV728_00885 IPR011773 DNA-directed RNA polymerase, alpha subunit CV728_00890 IPR036373 Ribosomal protein L17 superfamily CV728_00890 IPR000456 Ribosomal protein L17 CV728_00900 IPR006419 Nicotinamide mononucleotide transporter PnuC CV728_00915 IPR004305 Thiaminase-2/PQQC CV728_00915 IPR016084 Haem oxygenase-like, multi-helical CV728_00915 IPR027574 Thiaminase II CV728_00920 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CV728_00920 IPR023480 Uncharacterised protein family UPF0312/YceI CV728_00920 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CV728_00930 IPR002201 Glycosyl transferase, family 9 CV728_00935 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial CV728_00935 IPR005801 ADC synthase CV728_00935 IPR019999 Anthranilate synthase component I-like CV728_00935 IPR006805 Anthranilate synthase component I, N-terminal CV728_00935 IPR015890 Chorismate-utilising enzyme, C-terminal CV728_00940 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CV728_00940 IPR017926 Glutamine amidotransferase CV728_00940 IPR029062 Class I glutamine amidotransferase-like CV728_00945 IPR017459 Glycosyl transferase family 3, N-terminal domain CV728_00945 IPR005940 Anthranilate phosphoribosyl transferase CV728_00945 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CV728_00945 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CV728_00945 IPR000312 Glycosyl transferase, family 3 CV728_00950 IPR013785 Aldolase-type TIM barrel CV728_00950 IPR013798 Indole-3-glycerol phosphate synthase CV728_00950 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CV728_00950 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CV728_00950 IPR011060 Ribulose-phosphate binding barrel CV728_00955 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CV728_00955 IPR023026 Tryptophan synthase beta chain/beta chain-like CV728_00955 IPR006654 Tryptophan synthase, beta chain CV728_00955 IPR001926 Pyridoxal-phosphate dependent enzyme CV728_00955 IPR006653 Tryptophan synthase, beta chain, conserved site CV728_00960 IPR002028 Tryptophan synthase, alpha chain CV728_00960 IPR018204 Tryptophan synthase, alpha chain, active site CV728_00960 IPR013785 Aldolase-type TIM barrel CV728_00960 IPR011060 Ribulose-phosphate binding barrel CV728_00970 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CV728_00970 IPR016066 Alpha-D-phosphohexomutase, conserved site CV728_00970 IPR005843 Alpha-D-phosphohexomutase, C-terminal CV728_00970 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CV728_00970 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CV728_00970 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CV728_00970 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CV728_00970 IPR005841 Alpha-D-phosphohexomutase superfamily CV728_00980 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CV728_00980 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CV728_00985 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CV728_00985 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal CV728_00985 IPR010227 NADH-quinone oxidoreductase, chain M/4 CV728_00985 IPR003918 NADH:ubiquinone oxidoreductase CV728_00990 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CV728_00990 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CV728_00990 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CV728_00990 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CV728_00995 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CV728_00995 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CV728_01000 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CV728_01000 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CV728_01005 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CV728_01005 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CV728_01005 IPR010226 NADH-quinone oxidoreductase, chain I CV728_01005 IPR009051 Alpha-helical ferredoxin CV728_01010 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CV728_01010 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CV728_01015 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CV728_01015 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CV728_01015 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CV728_01015 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CV728_01015 IPR006656 Molybdopterin oxidoreductase CV728_01015 IPR006657 Molybdopterin dinucleotide-binding domain CV728_01015 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CV728_01015 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CV728_01015 IPR036010 2Fe-2S ferredoxin-like superfamily CV728_01015 IPR009010 Aspartate decarboxylase-like domain superfamily CV728_01015 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CV728_01015 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CV728_01030 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CV728_01030 IPR029014 [NiFe]-hydrogenase, large subunit CV728_01030 IPR001135 NADH-quinone oxidoreductase, subunit D CV728_01030 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CV728_01035 IPR010218 NADH dehydrogenase, subunit C CV728_01035 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CV728_01035 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CV728_01040 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CV728_01040 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CV728_01045 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CV728_01045 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CV728_01045 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CV728_01050 IPR029035 DHS-like NAD/FAD-binding domain superfamily CV728_01050 IPR026591 Sirtuin, catalytic core small domain superfamily CV728_01050 IPR027546 Sirtuin, class III CV728_01050 IPR003000 Sirtuin family CV728_01050 IPR026590 Sirtuin family, catalytic core domain CV728_01060 IPR006273 Orotate phosphoribosyltransferase, bacterial CV728_01060 IPR023031 Orotate phosphoribosyltransferase CV728_01060 IPR029057 Phosphoribosyltransferase-like CV728_01060 IPR000836 Phosphoribosyltransferase domain CV728_01065 IPR036191 RRF superfamily CV728_01065 IPR023584 Ribosome recycling factor domain CV728_01065 IPR002661 Ribosome recycling factor CV728_01070 IPR004692 Preprotein translocase SecG subunit CV728_01080 IPR002305 Aminoacyl-tRNA synthetase, class Ic CV728_01080 IPR024109 Tryptophan-tRNA ligase, bacterial-type CV728_01080 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CV728_01080 IPR002306 Tryptophan-tRNA ligase CV728_01080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_01090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_01090 IPR035906 MetI-like superfamily CV728_01100 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CV728_01100 IPR036291 NAD(P)-binding domain superfamily CV728_01100 IPR011342 Shikimate dehydrogenase CV728_01100 IPR022893 Shikimate dehydrogenase family CV728_01105 IPR022966 Ribonuclease II/R, conserved site CV728_01105 IPR011805 Ribonuclease R CV728_01105 IPR012340 Nucleic acid-binding, OB-fold CV728_01105 IPR001900 Ribonuclease II/R CV728_01110 IPR010372 DNA polymerase III delta, N-terminal CV728_01110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01120 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CV728_01120 IPR000529 Ribosomal protein S6 CV728_01120 IPR020814 Ribosomal protein S6, plastid/chloroplast CV728_01120 IPR020815 Ribosomal protein S6, conserved site CV728_01120 IPR035980 Ribosomal protein S6 superfamily CV728_01125 IPR000424 Primosome PriB/single-strand DNA-binding CV728_01125 IPR012340 Nucleic acid-binding, OB-fold CV728_01125 IPR011344 Single-stranded DNA-binding protein CV728_01130 IPR001648 Ribosomal protein S18 CV728_01130 IPR018275 Ribosomal protein S18, conserved site CV728_01130 IPR036870 Ribosomal protein S18 superfamily CV728_01150 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CV728_01150 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CV728_01150 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CV728_01150 IPR009000 Translation protein, beta-barrel domain superfamily CV728_01150 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CV728_01150 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CV728_01150 IPR003156 DHHA1 domain CV728_01150 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CV728_01150 IPR002318 Alanine-tRNA ligase, class IIc CV728_01155 IPR029001 Inosine triphosphate pyrophosphatase-like CV728_01155 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CV728_01165 IPR003010 Carbon-nitrogen hydrolase CV728_01165 IPR022843 Formamidase CV728_01165 IPR036526 Carbon-nitrogen hydrolase superfamily CV728_01170 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CV728_01170 IPR029062 Class I glutamine amidotransferase-like CV728_01170 IPR017926 Glutamine amidotransferase CV728_01170 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CV728_01170 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CV728_01170 IPR006274 Carbamoyl-phosphate synthase, small subunit CV728_01185 IPR000620 EamA domain CV728_01195 IPR000489 Pterin-binding domain CV728_01195 IPR016227 Dihydropteroate synthase, predicted CV728_01195 IPR006390 Dihydropteroate synthase CV728_01195 IPR011005 Dihydropteroate synthase-like CV728_01200 IPR003593 AAA+ ATPase domain CV728_01200 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CV728_01200 IPR022754 DNA polymerase III, gamma subunit, domain III CV728_01200 IPR012763 DNA polymerase III, subunit gamma/ tau CV728_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01210 IPR036393 Acetylglutamate kinase-like superfamily CV728_01210 IPR002912 ACT domain CV728_01210 IPR041740 Aspartokinase catalytic domain CV728_01210 IPR001048 Aspartate/glutamate/uridylate kinase CV728_01210 IPR005260 Aspartate kinase, monofunctional class CV728_01210 IPR001341 Aspartate kinase CV728_01210 IPR018042 Aspartate kinase, conserved site CV728_01210 IPR027795 CASTOR, ACT domain CV728_01215 IPR020084 NUDIX hydrolase, conserved site CV728_01215 IPR000086 NUDIX hydrolase domain CV728_01215 IPR022927 RNA pyrophosphohydrolase RppH CV728_01215 IPR015797 NUDIX hydrolase-like domain superfamily CV728_01215 IPR020476 NUDIX hydrolase CV728_01220 IPR009056 Cytochrome c-like domain CV728_01220 IPR036909 Cytochrome c-like domain superfamily CV728_01220 IPR008168 Cytochrome c, class IC CV728_01225 IPR004559 Heme chaperone HemW-like CV728_01225 IPR023404 Radical SAM, alpha/beta horseshoe CV728_01225 IPR006638 Elp3/MiaB/NifB CV728_01225 IPR034505 Anaerobic coproporphyrinogen-III oxidase CV728_01225 IPR007197 Radical SAM CV728_01230 IPR003691 Putative fluoride ion transporter CrcB CV728_01250 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CV728_01250 IPR001441 Decaprenyl diphosphate synthase-like CV728_01250 IPR036424 Decaprenyl diphosphate synthase-like superfamily CV728_01255 IPR003439 ABC transporter-like CV728_01255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01255 IPR003593 AAA+ ATPase domain CV728_01280 IPR016185 Pre-ATP-grasp domain superfamily CV728_01280 IPR013815 ATP-grasp fold, subdomain 1 CV728_01280 IPR011761 ATP-grasp fold CV728_01280 IPR000115 Phosphoribosylglycinamide synthetase CV728_01280 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CV728_01280 IPR011054 Rudiment single hybrid motif CV728_01280 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CV728_01280 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CV728_01280 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CV728_01290 IPR005653 Organic solvent tolerance-like, N-terminal CV728_01290 IPR007543 LptD, C-terminal CV728_01290 IPR020889 LPS-assembly protein LptD CV728_01300 IPR022967 RNA-binding domain, S1 CV728_01300 IPR027408 PNPase/RNase PH domain superfamily CV728_01300 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CV728_01300 IPR012162 Polyribonucleotide nucleotidyltransferase CV728_01300 IPR012340 Nucleic acid-binding, OB-fold CV728_01300 IPR036612 K Homology domain, type 1 superfamily CV728_01300 IPR004088 K Homology domain, type 1 CV728_01300 IPR004087 K Homology domain CV728_01300 IPR036345 Exoribonuclease, PH domain 2 superfamily CV728_01300 IPR001247 Exoribonuclease, phosphorolytic domain 1 CV728_01300 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_01300 IPR015847 Exoribonuclease, phosphorolytic domain 2 CV728_01300 IPR003029 S1 domain CV728_01305 IPR035921 F/V-ATP synthase subunit C superfamily CV728_01305 IPR000454 ATP synthase, F0 complex, subunit C CV728_01305 IPR002379 V-ATPase proteolipid subunit C-like domain CV728_01305 IPR038662 F1F0 ATP synthase subunit C superfamily CV728_01305 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CV728_01320 IPR001451 Hexapeptide repeat CV728_01320 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CV728_01320 IPR005881 Serine O-acetyltransferase CV728_01320 IPR011004 Trimeric LpxA-like superfamily CV728_01320 IPR018357 Hexapeptide transferase, conserved site CV728_01325 IPR007979 Type II restriction enzyme NlaIII/ICEA1 CV728_01330 IPR007979 Type II restriction enzyme NlaIII/ICEA1 CV728_01335 IPR007979 Type II restriction enzyme NlaIII/ICEA1 CV728_01340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_01340 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CV728_01340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_01350 IPR011527 ABC transporter type 1, transmembrane domain CV728_01350 IPR036640 ABC transporter type 1, transmembrane domain superfamily CV728_01350 IPR003439 ABC transporter-like CV728_01350 IPR039421 Type I protein exporter CV728_01350 IPR003593 AAA+ ATPase domain CV728_01350 IPR017871 ABC transporter, conserved site CV728_01350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01375 IPR033720 Elongation factor Tu, domain 2 CV728_01375 IPR031157 Tr-type G domain, conserved site CV728_01375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01375 IPR005225 Small GTP-binding protein domain CV728_01375 IPR000795 Transcription factor, GTP-binding domain CV728_01375 IPR009000 Translation protein, beta-barrel domain superfamily CV728_01375 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CV728_01375 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CV728_01375 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CV728_01375 IPR004161 Translation elongation factor EFTu-like, domain 2 CV728_01375 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CV728_01380 IPR038584 Ribosomal protein L33 superfamily CV728_01380 IPR001705 Ribosomal protein L33 CV728_01380 IPR018264 Ribosomal protein L33, conserved site CV728_01380 IPR011332 Zinc-binding ribosomal protein CV728_01395 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CV728_01395 IPR008991 Translation protein SH3-like domain superfamily CV728_01395 IPR001062 Transcription antitermination protein, NusG CV728_01395 IPR005824 KOW CV728_01395 IPR006645 NusG, N-terminal CV728_01395 IPR036735 NusG, N-terminal domain superfamily CV728_01395 IPR014722 Ribosomal protein L2, domain 2 CV728_01400 IPR000911 Ribosomal protein L11/L12 CV728_01400 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CV728_01400 IPR006519 Ribosomal protein L11, bacterial-type CV728_01400 IPR020783 Ribosomal protein L11, C-terminal CV728_01400 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CV728_01400 IPR020785 Ribosomal protein L11, conserved site CV728_01400 IPR020784 Ribosomal protein L11, N-terminal CV728_01405 IPR023673 Ribosomal protein L1, conserved site CV728_01405 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CV728_01405 IPR023674 Ribosomal protein L1-like CV728_01405 IPR002143 Ribosomal protein L1 CV728_01405 IPR005878 Ribosomal protein L1, bacterial-type CV728_01405 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CV728_01410 IPR022973 Ribosomal protein L10 CV728_01410 IPR002363 Ribosomal protein L10, eubacterial, conserved site CV728_01410 IPR001790 Ribosomal protein L10P CV728_01415 IPR000206 Ribosomal protein L7/L12 CV728_01415 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CV728_01415 IPR008932 Ribosomal protein L7/L12, oligomerisation CV728_01415 IPR013823 Ribosomal protein L7/L12, C-terminal CV728_01415 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CV728_01425 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CV728_01425 IPR007642 RNA polymerase Rpb2, domain 2 CV728_01425 IPR015712 DNA-directed RNA polymerase, subunit 2 CV728_01425 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CV728_01425 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CV728_01425 IPR000722 RNA polymerase, alpha subunit CV728_01425 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CV728_01425 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CV728_01425 IPR007083 RNA polymerase Rpb1, domain 4 CV728_01425 IPR007081 RNA polymerase Rpb1, domain 5 CV728_01425 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CV728_01425 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CV728_01425 IPR007645 RNA polymerase Rpb2, domain 3 CV728_01425 IPR007641 RNA polymerase Rpb2, domain 7 CV728_01425 IPR014724 RNA polymerase Rpb2, OB-fold CV728_01425 IPR007066 RNA polymerase Rpb1, domain 3 CV728_01425 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily CV728_01425 IPR007121 RNA polymerase, beta subunit, conserved site CV728_01425 IPR007644 RNA polymerase, beta subunit, protrusion CV728_01425 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CV728_01425 IPR006592 RNA polymerase, N-terminal CV728_01425 IPR007080 RNA polymerase Rpb1, domain 1 CV728_01430 IPR006032 Ribosomal protein S12/S23 CV728_01430 IPR005679 Ribosomal protein S12, bacterial-type CV728_01430 IPR012340 Nucleic acid-binding, OB-fold CV728_01435 IPR005717 Ribosomal protein S7, bacterial/organellar-type CV728_01435 IPR020606 Ribosomal protein S7, conserved site CV728_01435 IPR023798 Ribosomal protein S7 domain CV728_01435 IPR036823 Ribosomal protein S7 domain superfamily CV728_01435 IPR000235 Ribosomal protein S5/S7 CV728_01440 IPR005517 Translation elongation factor EFG/EF2, domain IV CV728_01440 IPR031157 Tr-type G domain, conserved site CV728_01440 IPR004161 Translation elongation factor EFTu-like, domain 2 CV728_01440 IPR041095 Elongation Factor G, domain II CV728_01440 IPR000795 Transcription factor, GTP-binding domain CV728_01440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01440 IPR009022 Elongation factor G, domain III CV728_01440 IPR035649 EFG, domain V CV728_01440 IPR035647 EF-G domain III/V-like CV728_01440 IPR005225 Small GTP-binding protein domain CV728_01440 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_01440 IPR009000 Translation protein, beta-barrel domain superfamily CV728_01440 IPR004540 Translation elongation factor EFG/EF2 CV728_01440 IPR000640 Elongation factor EFG, domain V-like CV728_01440 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_01445 IPR020471 Aldo/keto reductase CV728_01445 IPR023210 NADP-dependent oxidoreductase domain CV728_01445 IPR036812 NADP-dependent oxidoreductase domain superfamily CV728_01460 IPR002201 Glycosyl transferase, family 9 CV728_01465 IPR033656 Histidyl-anticodon-binding CV728_01465 IPR006195 Aminoacyl-tRNA synthetase, class II CV728_01465 IPR004154 Anticodon-binding CV728_01465 IPR036621 Anticodon-binding domain superfamily CV728_01465 IPR015807 Histidine-tRNA ligase CV728_01465 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CV728_01465 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CV728_01470 IPR012080 Aspartate-semialdehyde dehydrogenase CV728_01470 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CV728_01470 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CV728_01470 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CV728_01470 IPR000534 Semialdehyde dehydrogenase, NAD-binding CV728_01470 IPR036291 NAD(P)-binding domain superfamily CV728_01485 IPR023561 Carbonic anhydrase, alpha-class CV728_01485 IPR001148 Alpha carbonic anhydrase domain CV728_01485 IPR018338 Carbonic anhydrase, alpha-class, conserved site CV728_01485 IPR036398 Alpha carbonic anhydrase domain superfamily CV728_01485 IPR041891 Carbonic anhydrase, prokaryotic-like CV728_01490 IPR023495 Sugar efflux transporter, putative CV728_01490 IPR036259 MFS transporter superfamily CV728_01490 IPR020846 Major facilitator superfamily domain CV728_01490 IPR011701 Major facilitator superfamily CV728_01500 IPR006153 Cation/H+ exchanger CV728_01500 IPR003148 Regulator of K+ conductance, N-terminal CV728_01500 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CV728_01500 IPR006037 Regulator of K+ conductance, C-terminal CV728_01500 IPR036291 NAD(P)-binding domain superfamily CV728_01500 IPR038770 Sodium/solute symporter superfamily CV728_01505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_01505 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CV728_01505 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CV728_01505 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type CV728_01510 IPR020846 Major facilitator superfamily domain CV728_01510 IPR011701 Major facilitator superfamily CV728_01510 IPR036259 MFS transporter superfamily CV728_01520 IPR002668 Concentrative nucleoside transporter N-terminal domain CV728_01520 IPR011657 Concentrative nucleoside transporter C-terminal domain CV728_01520 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CV728_01520 IPR008276 Concentrative nucleoside transporter CV728_01525 IPR017850 Alkaline-phosphatase-like, core domain superfamily CV728_01525 IPR024052 Phosphopentomutase DeoB cap domain superfamily CV728_01525 IPR006124 Metalloenzyme CV728_01525 IPR010045 Phosphopentomutase CV728_01530 IPR035994 Nucleoside phosphorylase superfamily CV728_01530 IPR000845 Nucleoside phosphorylase domain CV728_01530 IPR018016 Nucleoside phosphorylase, conserved site CV728_01530 IPR004402 Purine nucleoside phosphorylase DeoD-type CV728_01545 IPR026033 Azaguanine-like transporters CV728_01545 IPR006043 Xanthine/uracil/vitamin C permease CV728_01550 IPR005964 Bacterial glucose/galactose transporter CV728_01550 IPR011701 Major facilitator superfamily CV728_01550 IPR036259 MFS transporter superfamily CV728_01565 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CV728_01565 IPR017871 ABC transporter, conserved site CV728_01565 IPR003439 ABC transporter-like CV728_01565 IPR003593 AAA+ ATPase domain CV728_01565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01570 IPR035906 MetI-like superfamily CV728_01570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_01570 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CV728_01575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_01575 IPR035906 MetI-like superfamily CV728_01575 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CV728_01580 IPR003706 CstA, N-terminal domain CV728_01580 IPR025299 CstA, C-terminal domain CV728_01595 IPR001672 Phosphoglucose isomerase (PGI) CV728_01595 IPR023096 Phosphoglucose isomerase, C-terminal CV728_01595 IPR018189 Phosphoglucose isomerase, conserved site CV728_01595 IPR035476 Phosphoglucose isomerase, SIS domain 1 CV728_01595 IPR035482 Phosphoglucose isomerase, SIS domain 2 CV728_01605 IPR023753 FAD/NAD(P)-binding domain CV728_01605 IPR022890 Ferredoxin--NADP reductase, type 2 CV728_01605 IPR036188 FAD/NAD(P)-binding domain superfamily CV728_01620 IPR008254 Flavodoxin/nitric oxide synthase CV728_01620 IPR010086 Flavodoxin, long chain CV728_01620 IPR029039 Flavoprotein-like superfamily CV728_01625 IPR020549 Endoribonuclease YbeY, conserved site CV728_01625 IPR002036 Endoribonuclease YbeY CV728_01625 IPR023091 Metalloprotease catalytic domain superfamily, predicted CV728_01630 IPR003812 Fido domain CV728_01630 IPR036597 Fido-like domain superfamily CV728_01635 IPR036291 NAD(P)-binding domain superfamily CV728_01635 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CV728_01635 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CV728_01635 IPR000304 Pyrroline-5-carboxylate reductase CV728_01635 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CV728_01650 IPR004276 Glycosyltransferase family 28, N-terminal domain CV728_01650 IPR007235 Glycosyl transferase, family 28, C-terminal CV728_01650 IPR006009 N-acetylglucosaminyltransferase, MurG CV728_01655 IPR024046 Flagellar assembly factor FliW domain superfamily CV728_01655 IPR003775 Flagellar assembly factor FliW CV728_01660 IPR002300 Aminoacyl-tRNA synthetase, class Ia CV728_01660 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CV728_01660 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CV728_01660 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CV728_01660 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CV728_01660 IPR002303 Valine-tRNA ligase CV728_01660 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CV728_01660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_01660 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CV728_01660 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CV728_01660 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CV728_01665 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CV728_01665 IPR013822 Signal recognition particle SRP54, helical bundle CV728_01665 IPR036225 SRP/SRP receptor, N-terminal CV728_01665 IPR004780 Signal recognition particle protein CV728_01665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01665 IPR003593 AAA+ ATPase domain CV728_01665 IPR022941 Signal recognition particle, SRP54 subunit CV728_01665 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CV728_01665 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CV728_01665 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CV728_01670 IPR000307 Ribosomal protein S16 CV728_01670 IPR023803 Ribosomal protein S16 domain superfamily CV728_01670 IPR020592 Ribosomal protein S16, conserved site CV728_01680 IPR036976 RimM, N-terminal domain superfamily CV728_01680 IPR002676 RimM, N-terminal CV728_01680 IPR011033 PRC-barrel-like superfamily CV728_01680 IPR009000 Translation protein, beta-barrel domain superfamily CV728_01680 IPR011961 16S rRNA processing protein RimM CV728_01680 IPR027275 PRC-barrel domain CV728_01685 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CV728_01685 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CV728_01685 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CV728_01685 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CV728_01685 IPR029028 Alpha/beta knot methyltransferases CV728_01690 IPR008991 Translation protein SH3-like domain superfamily CV728_01690 IPR018257 Ribosomal protein L19, conserved site CV728_01690 IPR001857 Ribosomal protein L19 CV728_01690 IPR038657 Ribosomal protein L19 superfamily CV728_01730 IPR002376 Formyl transferase, N-terminal CV728_01730 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CV728_01730 IPR011034 Formyl transferase-like, C-terminal domain superfamily CV728_01730 IPR036477 Formyl transferase, N-terminal domain superfamily CV728_01730 IPR005793 Formyl transferase, C-terminal CV728_01730 IPR037022 Formyl transferase, C-terminal domain superfamily CV728_01730 IPR005794 Methionyl-tRNA formyltransferase CV728_01735 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CV728_01735 IPR008988 Transcriptional repressor, C-terminal CV728_01735 IPR004619 Type III pantothenate kinase CV728_01735 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CV728_01735 IPR003142 Biotin protein ligase, C-terminal CV728_01740 IPR025669 AAA domain CV728_01740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01745 IPR041468 ParB/Spo0J, HTH domain CV728_01745 IPR004437 ParB/RepB/Spo0J partition protein CV728_01745 IPR003115 ParB/Sulfiredoxin CV728_01745 IPR036086 ParB/Sulfiredoxin superfamily CV728_01755 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CV728_01755 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CV728_01765 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CV728_01765 IPR000793 ATP synthase, alpha subunit, C-terminal CV728_01765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01765 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CV728_01765 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CV728_01765 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CV728_01765 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CV728_01765 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CV728_01765 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CV728_01765 IPR005294 ATP synthase, F1 complex, alpha subunit CV728_01770 IPR000131 ATP synthase, F1 complex, gamma subunit CV728_01770 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CV728_01775 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CV728_01775 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CV728_01775 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CV728_01775 IPR005722 ATP synthase, F1 complex, beta subunit CV728_01775 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CV728_01775 IPR003593 AAA+ ATPase domain CV728_01775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01775 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CV728_01780 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CV728_01780 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CV728_01780 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CV728_01785 IPR002898 MotA/TolQ/ExbB proton channel CV728_01785 IPR017269 Biopolymer transport ExbB-like protein 1 CV728_01790 IPR003400 Biopolymer transport protein ExbD/TolR CV728_01800 IPR014167 Tol-Pal system protein TolB CV728_01800 IPR011659 WD40-like Beta Propeller CV728_01800 IPR011042 Six-bladed beta-propeller, TolB-like CV728_01805 IPR006665 OmpA-like domain CV728_01805 IPR006664 Outer membrane protein, bacterial CV728_01805 IPR006690 Outer membrane protein, OmpA-like, conserved site CV728_01805 IPR039001 Peptidoglycan-associated lipoprotein CV728_01805 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CV728_01805 IPR036737 OmpA-like domain superfamily CV728_01815 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CV728_01830 IPR018117 DNA methylase, C-5 cytosine-specific, active site CV728_01830 IPR001525 C-5 cytosine methyltransferase CV728_01830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_01840 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CV728_01840 IPR011491 Flagellar hook protein FlgE CV728_01840 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CV728_01840 IPR037058 Flagellar hook protein FlgE superfamily CV728_01840 IPR001444 Flagellar basal body rod protein, N-terminal CV728_01840 IPR019776 Flagellar basal body rod protein, conserved site CV728_01840 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CV728_01845 IPR000101 Gamma-glutamyltranspeptidase CV728_01845 IPR029055 Nucleophile aminohydrolases, N-terminal CV728_01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_01875 IPR001650 Helicase, C-terminal CV728_01875 IPR001943 UVR domain CV728_01875 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_01875 IPR024759 UvrB, YAD/RRR-motif-containing domain CV728_01875 IPR041471 UvrB, interaction domain CV728_01875 IPR004807 UvrABC system, subunit B CV728_01875 IPR036876 UVR domain superfamily CV728_01875 IPR006935 Helicase/UvrB, N-terminal CV728_01885 IPR008948 L-Aspartase-like CV728_01885 IPR024083 Fumarase/histidase, N-terminal CV728_01885 IPR022761 Fumarate lyase, N-terminal CV728_01885 IPR019468 Adenylosuccinate lyase C-terminal CV728_01885 IPR020557 Fumarate lyase, conserved site CV728_01885 IPR000362 Fumarate lyase family CV728_01885 IPR004769 Adenylosuccinate lyase CV728_01890 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CV728_01890 IPR029061 Thiamin diphosphate-binding fold CV728_01895 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CV728_01895 IPR029061 Thiamin diphosphate-binding fold CV728_01895 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CV728_01895 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CV728_01905 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CV728_01905 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate CV728_01905 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CV728_01935 IPR020843 Polyketide synthase, enoylreductase domain CV728_01935 IPR013154 Alcohol dehydrogenase, N-terminal CV728_01935 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CV728_01935 IPR036291 NAD(P)-binding domain superfamily CV728_01935 IPR011032 GroES-like superfamily CV728_01935 IPR013149 Alcohol dehydrogenase, C-terminal CV728_01940 IPR003836 Glucokinase CV728_01945 IPR005900 6-phosphogluconolactonase, DevB-type CV728_01945 IPR039104 6-Phosphogluconolactonase CV728_01945 IPR037171 NagB/RpiA transferase-like CV728_01945 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CV728_01950 IPR019796 Glucose-6-phosphate dehydrogenase, active site CV728_01950 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CV728_01950 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CV728_01950 IPR036291 NAD(P)-binding domain superfamily CV728_01950 IPR001282 Glucose-6-phosphate dehydrogenase CV728_01955 IPR037237 IlvD/EDD, N-terminal domain CV728_01955 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CV728_01955 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CV728_01955 IPR042096 Dihydroxy-acid dehydratase, C-terminal CV728_01955 IPR004786 6-phosphogluconate dehydratase CV728_01960 IPR031338 KDPG/KHG aldolase, active site 2 CV728_01960 IPR013785 Aldolase-type TIM barrel CV728_01960 IPR000887 KDPG/KHG aldolase CV728_01960 IPR031337 KDPG/KHG aldolase, active site 1 CV728_01965 IPR040239 Beta-lactamase HcpB-like CV728_01965 IPR006597 Sel1-like repeat CV728_01965 IPR011990 Tetratricopeptide-like helical domain superfamily CV728_01965 IPR019734 Tetratricopeptide repeat CV728_01970 IPR020904 Short-chain dehydrogenase/reductase, conserved site CV728_01970 IPR002347 Short-chain dehydrogenase/reductase SDR CV728_01970 IPR036291 NAD(P)-binding domain superfamily CV728_01990 IPR001509 NAD-dependent epimerase/dehydratase CV728_01990 IPR005886 UDP-glucose 4-epimerase CV728_01990 IPR036291 NAD(P)-binding domain superfamily CV728_01995 IPR001406 Pseudouridine synthase I, TruA CV728_01995 IPR020095 Pseudouridine synthase I, TruA, C-terminal CV728_01995 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CV728_01995 IPR020103 Pseudouridine synthase, catalytic domain superfamily CV728_02005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_02005 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CV728_02010 IPR000358 Ribonucleotide reductase small subunit family CV728_02010 IPR030475 Ribonucleotide reductase small subunit, acitve site CV728_02010 IPR033909 Ribonucleotide reductase small subunit CV728_02010 IPR012348 Ribonucleotide reductase-like CV728_02010 IPR009078 Ferritin-like superfamily CV728_02020 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_02020 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CV728_02020 IPR015424 Pyridoxal phosphate-dependent transferase CV728_02020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_02020 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase CV728_02040 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CV728_02040 IPR016185 Pre-ATP-grasp domain superfamily CV728_02040 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CV728_02040 IPR011761 ATP-grasp fold CV728_02040 IPR011054 Rudiment single hybrid motif CV728_02040 IPR011764 Biotin carboxylation domain CV728_02040 IPR005481 Biotin carboxylase-like, N-terminal domain CV728_02040 IPR005482 Biotin carboxylase, C-terminal CV728_02045 IPR001249 Acetyl-CoA biotin carboxyl carrier CV728_02045 IPR011053 Single hybrid motif CV728_02045 IPR000089 Biotin/lipoyl attachment CV728_02045 IPR001882 Biotin-binding site CV728_02050 IPR033704 dUTPase, trimeric CV728_02050 IPR036157 dUTPase-like superfamily CV728_02050 IPR011962 dCTP deaminase CV728_02050 IPR029054 dUTPase-like CV728_02060 IPR029028 Alpha/beta knot methyltransferases CV728_02060 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CV728_02060 IPR006700 Ribosomal RNA small subunit methyltransferase E CV728_02070 IPR001015 Ferrochelatase CV728_02070 IPR019772 Ferrochelatase, active site CV728_02070 IPR033644 Ferrochelatase, C-terminal CV728_02070 IPR033659 Ferrochelatase, N-terminal CV728_02080 IPR007816 ResB-like domain CV728_02080 IPR002541 Cytochrome c assembly protein CV728_02085 IPR038577 GT10-like superfamily CV728_02085 IPR016646 Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, Helicobacter CV728_02085 IPR041058 Alpha-(1,3)-fucosyltransferase FucT, N-terminal CV728_02085 IPR001503 Glycosyl transferase family 10 CV728_02090 IPR036291 NAD(P)-binding domain superfamily CV728_02090 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CV728_02090 IPR033524 Leu/Phe/Val dehydrogenases active site CV728_02090 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CV728_02090 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CV728_02090 IPR014362 Glutamate dehydrogenase CV728_02090 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CV728_02095 IPR004556 Methyltransferase HemK-like CV728_02095 IPR007848 Methyltransferase small domain CV728_02095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_02095 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CV728_02095 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_02095 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CV728_02100 IPR001915 Peptidase M48 CV728_02100 IPR022919 Peptidase M48, protease HtpX, putative CV728_02125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_02125 IPR005259 Primosomal protein N' CV728_02125 IPR001650 Helicase, C-terminal CV728_02125 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_02125 IPR041236 Primosomal protein N, C-terminal domain CV728_02125 IPR041222 Primosomal protein N', 3' DNA-binding domain CV728_02125 IPR011545 DEAD/DEAH box helicase domain CV728_02125 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CV728_02130 IPR041698 Methyltransferase domain 25 CV728_02130 IPR005271 Carboxy-S-adenosyl-L-methionine synthase CV728_02130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_02135 IPR001189 Manganese/iron superoxide dismutase CV728_02135 IPR019832 Manganese/iron superoxide dismutase, C-terminal CV728_02135 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CV728_02135 IPR019833 Manganese/iron superoxide dismutase, binding site CV728_02135 IPR019831 Manganese/iron superoxide dismutase, N-terminal CV728_02135 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CV728_02140 IPR013740 Redoxin CV728_02140 IPR013766 Thioredoxin domain CV728_02140 IPR002065 Thiol peroxidase Tpx CV728_02140 IPR018219 Thiol peroxidase conserved site CV728_02140 IPR036249 Thioredoxin-like superfamily CV728_02150 IPR003594 Histidine kinase/HSP90-like ATPase CV728_02150 IPR005467 Histidine kinase domain CV728_02150 IPR035891 CheY-binding domain of CheA CV728_02150 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CV728_02150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CV728_02150 IPR002545 CheW-like domain CV728_02150 IPR036061 CheW-like domain superfamily CV728_02150 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding CV728_02150 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CV728_02150 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CV728_02150 IPR004105 Histidine kinase CheA-like, homodimeric domain CV728_02150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CV728_02150 IPR036641 HPT domain superfamily CV728_02150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CV728_02155 IPR036061 CheW-like domain superfamily CV728_02155 IPR002545 CheW-like domain CV728_02155 IPR011006 CheY-like superfamily CV728_02155 IPR001789 Signal transduction response regulator, receiver domain CV728_02155 IPR024181 Chemotaxis response regulator CheV CV728_02165 IPR001608 Alanine racemase, N-terminal CV728_02165 IPR029066 PLP-binding barrel CV728_02165 IPR011078 Pyridoxal phosphate homeostasis protein CV728_02170 IPR002830 UbiD decarboxylyase family CV728_02170 IPR022390 4-hydroxybenzoate decarboxylase subunit C CV728_02175 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CV728_02175 IPR029009 Allosteric substrate binding domain superfamily CV728_02175 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CV728_02175 IPR036291 NAD(P)-binding domain superfamily CV728_02175 IPR002912 ACT domain CV728_02175 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CV728_02175 IPR006236 D-3-phosphoglycerate dehydrogenase CV728_02175 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CV728_02185 IPR000110 Ribosomal protein S1 CV728_02185 IPR022967 RNA-binding domain, S1 CV728_02185 IPR003029 S1 domain CV728_02185 IPR012340 Nucleic acid-binding, OB-fold CV728_02190 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CV728_02195 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CV728_02195 IPR036968 Enolpyruvate transferase domain superfamily CV728_02195 IPR001986 Enolpyruvate transferase domain CV728_02195 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CV728_02195 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CV728_02200 IPR005121 Ferrodoxin-fold anticodon-binding domain CV728_02200 IPR005147 tRNA synthetase, B5-domain CV728_02200 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CV728_02200 IPR002547 tRNA-binding domain CV728_02200 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CV728_02200 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CV728_02200 IPR012340 Nucleic acid-binding, OB-fold CV728_02200 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CV728_02200 IPR009061 Putative DNA-binding domain superfamily CV728_02205 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CV728_02205 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CV728_02205 IPR002319 Phenylalanyl-tRNA synthetase CV728_02205 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CV728_02205 IPR006195 Aminoacyl-tRNA synthetase, class II CV728_02205 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CV728_02210 IPR011146 HIT-like domain CV728_02210 IPR036265 HIT-like superfamily CV728_02210 IPR001310 Histidine triad (HIT) protein CV728_02210 IPR019808 Histidine triad, conserved site CV728_02215 IPR015424 Pyridoxal phosphate-dependent transferase CV728_02215 IPR020581 Glycine cleavage system P protein CV728_02215 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 CV728_02215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_02215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_02225 IPR041460 Molybdopterin oxidoreductase, N-terminal CV728_02225 IPR009010 Aspartate decarboxylase-like domain superfamily CV728_02225 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain CV728_02225 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CV728_02225 IPR006657 Molybdopterin dinucleotide-binding domain CV728_02225 IPR006656 Molybdopterin oxidoreductase CV728_02225 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CV728_02225 IPR006311 Twin-arginine translocation pathway, signal sequence CV728_02235 IPR017926 Glutamine amidotransferase CV728_02235 IPR004739 GMP synthase, glutamine amidotransferase CV728_02235 IPR025777 GMP synthetase ATP pyrophosphatase domain CV728_02235 IPR022310 NAD/GMP synthase CV728_02235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_02235 IPR001674 GMP synthase, C-terminal CV728_02235 IPR022955 GMP synthase CV728_02235 IPR029062 Class I glutamine amidotransferase-like CV728_02270 IPR010920 LSM domain superfamily CV728_02270 IPR011066 Mechanosensitive ion channel MscS, C-terminal CV728_02270 IPR006685 Mechanosensitive ion channel MscS CV728_02270 IPR023408 Mechanosensitive ion channel MscS domain superfamily CV728_02270 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CV728_02270 IPR006686 Mechanosensitive ion channel MscS, conserved site CV728_02275 IPR003333 Mycolic acid cyclopropane synthase CV728_02275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_02280 IPR002300 Aminoacyl-tRNA synthetase, class Ia CV728_02280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_02280 IPR014758 Methionyl-tRNA synthetase CV728_02280 IPR023457 Methionine-tRNA synthetase, type 2 CV728_02280 IPR015413 Methionyl/Leucyl tRNA synthetase CV728_02280 IPR033911 Methioninyl-tRNA synthetase core domain CV728_02280 IPR012340 Nucleic acid-binding, OB-fold CV728_02280 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CV728_02280 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CV728_02280 IPR002547 tRNA-binding domain CV728_02290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_02290 IPR010017 tRNA U34 carboxymethyltransferase CV728_02290 IPR027555 tRNA (mo5U34)-methyltransferase-like CV728_02305 IPR041128 Arginine decarboxylase, C-terminal helical CV728_02305 IPR029066 PLP-binding barrel CV728_02305 IPR000183 Ornithine/DAP/Arg decarboxylase CV728_02305 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CV728_02305 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CV728_02305 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CV728_02305 IPR040634 Arginine decarboxylase, helical bundle domain CV728_02305 IPR002985 Arginine decarboxylase CV728_02370 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CV728_02370 IPR011066 Mechanosensitive ion channel MscS, C-terminal CV728_02370 IPR006685 Mechanosensitive ion channel MscS CV728_02370 IPR010920 LSM domain superfamily CV728_02370 IPR023408 Mechanosensitive ion channel MscS domain superfamily CV728_02390 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CV728_02390 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily CV728_02390 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CV728_02390 IPR000158 Cell division protein FtsZ CV728_02390 IPR003008 Tubulin/FtsZ, GTPase domain CV728_02390 IPR020805 Cell division protein FtsZ, conserved site CV728_02390 IPR008280 Tubulin/FtsZ, C-terminal CV728_02390 IPR024757 Cell division protein FtsZ, C-terminal CV728_02395 IPR003494 SHS2 domain inserted in FtsA CV728_02395 IPR020823 Cell division protein FtsA CV728_02405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_02405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_02405 IPR005814 Aminotransferase class-III CV728_02405 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CV728_02405 IPR015424 Pyridoxal phosphate-dependent transferase CV728_02410 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CV728_02410 IPR003837 Glu-tRNAGln amidotransferase C subunit CV728_02415 IPR017850 Alkaline-phosphatase-like, core domain superfamily CV728_02415 IPR011258 BPG-independent PGAM, N-terminal CV728_02415 IPR006124 Metalloenzyme CV728_02415 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CV728_02415 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CV728_02425 IPR015944 Glycine-tRNA ligase, beta subunit CV728_02425 IPR006194 Glycine-tRNA synthetase, heterodimeric CV728_02440 IPR001036 Acriflavin resistance protein CV728_02440 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CV728_02440 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CV728_02470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CV728_02470 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CV728_02470 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CV728_02470 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CV728_02470 IPR036291 NAD(P)-binding domain superfamily CV728_02470 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CV728_02475 IPR002310 Glycine-tRNA ligase, alpha subunit CV728_02475 IPR006194 Glycine-tRNA synthetase, heterodimeric CV728_02480 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CV728_02480 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CV728_02490 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CV728_02490 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CV728_02490 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CV728_02490 IPR001296 Glycosyl transferase, family 1 CV728_02495 IPR020103 Pseudouridine synthase, catalytic domain superfamily CV728_02495 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CV728_02495 IPR006145 Pseudouridine synthase, RsuA/RluA CV728_02495 IPR002942 RNA-binding S4 domain CV728_02500 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CV728_02505 IPR029479 Nitroreductase CV728_02505 IPR033878 Nitroreductase NfsB-like CV728_02505 IPR000415 Nitroreductase-like CV728_02515 IPR008135 Competence-induced protein CinA CV728_02515 IPR036653 CinA-like, C-terminal CV728_02515 IPR041424 CinA, KH domain CV728_02515 IPR008136 CinA, C-terminal CV728_02515 IPR036425 MoaB/Mog-like domain superfamily CV728_02515 IPR001453 MoaB/Mog domain CV728_02525 IPR041010 Acetyl-coA carboxylase zinc finger domain CV728_02525 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CV728_02525 IPR034733 Acetyl-CoA carboxylase CV728_02525 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CV728_02525 IPR029045 ClpP/crotonase-like domain superfamily CV728_02530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CV728_02530 IPR029028 Alpha/beta knot methyltransferases CV728_02530 IPR003742 RNA methyltransferase RlmH CV728_02545 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CV728_02575 IPR006056 RidA family CV728_02575 IPR006175 YjgF/YER057c/UK114 family CV728_02575 IPR019897 RidA, conserved site CV728_02575 IPR035959 RutC-like superfamily CV728_02580 IPR006076 FAD dependent oxidoreductase CV728_02580 IPR036188 FAD/NAD(P)-binding domain superfamily CV728_02585 IPR001463 Sodium:alanine symporter CV728_02590 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CV728_02590 IPR000821 Alanine racemase CV728_02590 IPR011079 Alanine racemase, C-terminal CV728_02590 IPR001608 Alanine racemase, N-terminal CV728_02590 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CV728_02590 IPR029066 PLP-binding barrel CV728_02595 IPR018313 Solute-binding protein family 3, conserved site CV728_02595 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CV728_02600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_02600 IPR035906 MetI-like superfamily CV728_02600 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CV728_02630 IPR024924 7-carboxy-7-deazaguanine synthase-like CV728_02630 IPR013785 Aldolase-type TIM barrel CV728_02635 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CV728_02635 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CV728_02645 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CV728_02645 IPR030048 Survival protein SurE CV728_02645 IPR036523 SurE-like phosphatase/nucleotidase superfamily CV728_02650 IPR000092 Polyprenyl synthetase CV728_02650 IPR008949 Isoprenoid synthase domain superfamily CV728_02650 IPR033749 Polyprenyl synthetase, conserved site CV728_02655 IPR020602 GTP cyclohydrolase I domain CV728_02655 IPR018234 GTP cyclohydrolase I, conserved site CV728_02655 IPR001474 GTP cyclohydrolase I CV728_02660 IPR001915 Peptidase M48 CV728_02660 IPR022919 Peptidase M48, protease HtpX, putative CV728_02665 IPR020119 Pseudouridine synthase TruD, conserved site CV728_02665 IPR001656 Pseudouridine synthase, TruD CV728_02665 IPR011760 Pseudouridine synthase, TruD, insertion domain CV728_02665 IPR020103 Pseudouridine synthase, catalytic domain superfamily CV728_02670 IPR000093 DNA recombination protein RecR CV728_02670 IPR023627 Recombination protein RecR CV728_02670 IPR023628 Recombination protein RecR, C4-type zinc finger CV728_02670 IPR015967 Recombination protein RecR, conserved site CV728_02670 IPR006171 TOPRIM domain CV728_02670 IPR034137 RecR, TOPRIM domain CV728_02675 IPR004370 4-oxalocrotonate tautomerase CV728_02675 IPR014347 Tautomerase/MIF superfamily CV728_02675 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CV728_02685 IPR036709 Autotransporter beta-domain superfamily CV728_02685 IPR005546 Autotransporter beta-domain CV728_02685 IPR003842 Vacuolating cytotoxin CV728_02690 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CV728_02690 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CV728_02690 IPR036291 NAD(P)-binding domain superfamily CV728_02690 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CV728_02690 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CV728_02690 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CV728_02695 IPR006214 Bax inhibitor 1-related CV728_02700 IPR016185 Pre-ATP-grasp domain superfamily CV728_02700 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CV728_02700 IPR036914 Methylglyoxal synthase-like domain superfamily CV728_02700 IPR011607 Methylglyoxal synthase-like domain CV728_02700 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CV728_02700 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CV728_02700 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CV728_02700 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CV728_02700 IPR006275 Carbamoyl-phosphate synthase, large subunit CV728_02700 IPR011761 ATP-grasp fold CV728_02730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_02730 IPR014016 UvrD-like helicase, ATP-binding domain CV728_02730 IPR034739 UvrD/AddA helicase, N-terminal CV728_02730 IPR000212 DNA helicase, UvrD/REP type CV728_02730 IPR014017 UvrD-like DNA helicase, C-terminal CV728_02730 IPR013986 DExx box DNA helicase domain superfamily CV728_02730 IPR005751 ATP-dependent DNA helicase PcrA CV728_02735 IPR003356 DNA methylase, adenine-specific CV728_02735 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_02735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_02735 IPR011639 Restriction modification methylase Eco57I CV728_02745 IPR001444 Flagellar basal body rod protein, N-terminal CV728_02745 IPR001444 Flagellar basal body rod protein, N-terminal CV728_02745 IPR019776 Flagellar basal body rod protein, conserved site CV728_02745 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CV728_02745 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CV728_02745 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CV728_02745 IPR011491 Flagellar hook protein FlgE CV728_02745 IPR037058 Flagellar hook protein FlgE superfamily CV728_02745 IPR011491 Flagellar hook protein FlgE CV728_02745 IPR019776 Flagellar basal body rod protein, conserved site CV728_02745 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CV728_02745 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CV728_02745 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CV728_02745 IPR037058 Flagellar hook protein FlgE superfamily CV728_02750 IPR005648 Flagellar hook capping protein CV728_02750 IPR025965 FlgD Ig-like domain CV728_02750 IPR025963 FlgD Tudor-like domain CV728_02780 IPR004392 Hydrogenase maturation factor HypB CV728_02780 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CV728_02780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_02785 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CV728_02785 IPR019812 Hydrogenase assembly chaperone, conserved site CV728_02785 IPR037254 HupF/HypC superfamily CV728_02790 IPR042243 HypD, domain 2 CV728_02790 IPR042244 HypD, domain 1 CV728_02790 IPR002780 Hydrogenase formation HypD protein CV728_02825 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CV728_02825 IPR016368 Virulence-associated protein D CV728_02830 IPR006683 Thioesterase domain CV728_02830 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CV728_02830 IPR029069 HotDog domain superfamily CV728_02830 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CV728_02835 IPR020904 Short-chain dehydrogenase/reductase, conserved site CV728_02835 IPR036291 NAD(P)-binding domain superfamily CV728_02835 IPR002347 Short-chain dehydrogenase/reductase SDR CV728_02840 IPR000522 ABC transporter, permease protein, BtuC-like CV728_02840 IPR037294 ABC transporter, BtuC-like CV728_02845 IPR003439 ABC transporter-like CV728_02845 IPR017871 ABC transporter, conserved site CV728_02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_02845 IPR003593 AAA+ ATPase domain CV728_02850 IPR036709 Autotransporter beta-domain superfamily CV728_02850 IPR005546 Autotransporter beta-domain CV728_02850 IPR003842 Vacuolating cytotoxin CV728_02850 IPR006315 Outer membrane autotransporter barrel CV728_02855 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CV728_02855 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CV728_02855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_02855 IPR032678 tRNA synthetases class I, catalytic domain CV728_02855 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CV728_02855 IPR015803 Cysteine-tRNA ligase CV728_02860 IPR004268 Peptidoglycan biosynthesis protein MurJ CV728_02870 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CV728_02870 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CV728_02870 IPR000085 Bacterial DNA recombination protein RuvA CV728_02870 IPR010994 RuvA domain 2-like CV728_02870 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CV728_02870 IPR036267 RuvA, C-terminal domain superfamily CV728_02870 IPR012340 Nucleic acid-binding, OB-fold CV728_02895 IPR001383 Ribosomal protein L28 CV728_02895 IPR034704 L28p-like CV728_02895 IPR026569 Ribosomal protein L28/L24 CV728_02895 IPR037147 Ribosomal protein L28/L24 superfamily CV728_02905 IPR000715 Glycosyl transferase, family 4 CV728_02905 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CV728_02905 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CV728_02910 IPR036565 Mur-like, catalytic domain superfamily CV728_02910 IPR004101 Mur ligase, C-terminal CV728_02910 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CV728_02910 IPR036615 Mur ligase, C-terminal domain superfamily CV728_02910 IPR013221 Mur ligase, central CV728_02915 IPR027471 YbeD-like domain superfamily CV728_02915 IPR007454 Uncharacterised protein family UPF0250 CV728_02920 IPR029069 HotDog domain superfamily CV728_02920 IPR006683 Thioesterase domain CV728_02920 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CV728_02920 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CV728_02925 IPR037272 Sodium:neurotransmitter symporter superfamily CV728_02925 IPR000175 Sodium:neurotransmitter symporter CV728_02930 IPR000175 Sodium:neurotransmitter symporter CV728_02930 IPR037272 Sodium:neurotransmitter symporter superfamily CV728_02940 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CV728_02940 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CV728_02940 IPR001001 DNA polymerase III, beta sliding clamp CV728_02940 IPR022637 DNA polymerase III, beta sliding clamp, central CV728_02945 IPR034160 DNA gyrase subunit B, TOPRIM domain CV728_02945 IPR006171 TOPRIM domain CV728_02945 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CV728_02945 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CV728_02945 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CV728_02945 IPR001241 DNA topoisomerase, type IIA CV728_02945 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_02945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CV728_02945 IPR003594 Histidine kinase/HSP90-like ATPase CV728_02945 IPR011557 DNA gyrase, subunit B CV728_02945 IPR002288 DNA gyrase B subunit, C-terminal CV728_02945 IPR018522 DNA topoisomerase, type IIA, conserved site CV728_02945 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_02960 IPR008258 Transglycosylase SLT domain 1 CV728_02960 IPR011055 Duplicated hybrid motif CV728_02960 IPR023346 Lysozyme-like domain superfamily CV728_02960 IPR016047 Peptidase M23 CV728_02960 IPR000189 Prokaryotic transglycosylase, active site CV728_02960 IPR010090 Phage tail tape measure protein CV728_02970 IPR029276 Plasminogen-binding protein PgbA, N-terminal CV728_02970 IPR032737 Plasminogen-binding protein PgbA, C-terminal CV728_02975 IPR016166 FAD-binding domain, PCMH-type CV728_02975 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CV728_02975 IPR004113 FAD-linked oxidase, C-terminal CV728_02975 IPR016164 FAD-linked oxidase-like, C-terminal CV728_02975 IPR036318 FAD-binding, type PCMH-like superfamily CV728_02975 IPR004490 Glycolate oxidase subunit GlcD CV728_02975 IPR006094 FAD linked oxidase, N-terminal CV728_02980 IPR022663 Dihydrodipicolinate reductase, C-terminal CV728_02980 IPR000846 Dihydrodipicolinate reductase, N-terminal CV728_02980 IPR022664 Dihydrodipicolinate reductase, conserved site CV728_02980 IPR023940 Dihydrodipicolinate reductase CV728_02980 IPR036291 NAD(P)-binding domain superfamily CV728_03000 IPR023298 P-type ATPase, transmembrane domain superfamily CV728_03000 IPR004346 CagE, TrbE, VirB component of type IV transporter system CV728_03000 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CV728_03000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03060 IPR032020 CAG pathogenicity island protein 13 CV728_03060 IPR038306 CagS superfamily CV728_03065 IPR025264 Cag pathogenicity island protein Cag12 CV728_03090 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CV728_03090 IPR042217 Type IV secretion system, VirB10/TrbI CV728_03100 IPR001482 Type II/IV secretion system protein CV728_03100 IPR014155 Type IV secretion system protein VirB11 CV728_03100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03100 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CV728_03105 IPR003688 Type IV secretion system protein TraG/VirD4 CV728_03105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03140 IPR008146 Glutamine synthetase, catalytic domain CV728_03140 IPR036651 Glutamine synthetase, N-terminal domain superfamily CV728_03140 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CV728_03140 IPR027303 Glutamine synthetase, glycine-rich site CV728_03140 IPR004809 Glutamine synthetase type I CV728_03140 IPR008147 Glutamine synthetase, beta-Grasp domain CV728_03150 IPR020070 Ribosomal protein L9, N-terminal CV728_03150 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CV728_03150 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CV728_03150 IPR020594 Ribosomal protein L9, bacteria/chloroplast CV728_03150 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CV728_03150 IPR000244 Ribosomal protein L9 CV728_03150 IPR020069 Ribosomal protein L9, C-terminal CV728_03155 IPR029055 Nucleophile aminohydrolases, N-terminal CV728_03155 IPR023333 Proteasome B-type subunit CV728_03155 IPR001353 Proteasome, subunit alpha/beta CV728_03155 IPR022281 ATP-dependent protease, HslV subunit CV728_03160 IPR003959 ATPase, AAA-type, core CV728_03160 IPR019489 Clp ATPase, C-terminal CV728_03160 IPR004491 Heat shock protein HslU CV728_03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03160 IPR003593 AAA+ ATPase domain CV728_03165 IPR006073 GTP binding domain CV728_03165 IPR030388 Era-type guanine nucleotide-binding (G) domain CV728_03165 IPR005662 GTP-binding protein Era CV728_03165 IPR015946 K homology domain-like, alpha/beta CV728_03165 IPR004044 K Homology domain, type 2 CV728_03165 IPR009019 K homology domain superfamily, prokaryotic type CV728_03165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03165 IPR005225 Small GTP-binding protein domain CV728_03215 IPR005169 CagA exotoxin CV728_03215 IPR004355 Type IV secretion system CagA exotoxin CV728_03230 IPR018187 Asp/Glu racemase, active site 1 CV728_03230 IPR015942 Asp/Glu/hydantoin racemase CV728_03230 IPR033134 Asp/Glu racemase, active site 2 CV728_03230 IPR004391 Glutamate racemase CV728_03230 IPR001920 Asp/Glu racemase CV728_03235 IPR003593 AAA+ ATPase domain CV728_03235 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CV728_03235 IPR011129 Cold shock domain CV728_03235 IPR012340 Nucleic acid-binding, OB-fold CV728_03235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03235 IPR041703 Transcription termination factor Rho, ATP binding domain CV728_03235 IPR011112 Rho termination factor, N-terminal CV728_03235 IPR004665 Transcription termination factor Rho CV728_03235 IPR036269 Rho termination factor, N-terminal domain superfamily CV728_03235 IPR011113 Rho termination factor, RNA-binding domain CV728_03240 IPR034704 L28p-like CV728_03240 IPR002150 Ribosomal protein L31 CV728_03240 IPR027491 Ribosomal protein L31 type A CV728_03240 IPR042105 Ribosomal protein L31 superfamily CV728_03245 IPR035996 Tetrapyrrole methylase superfamily CV728_03245 IPR014777 Tetrapyrrole methylase, subdomain 1 CV728_03245 IPR014776 Tetrapyrrole methylase, subdomain 2 CV728_03245 IPR008189 rRNA small subunit methyltransferase I CV728_03245 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CV728_03245 IPR000878 Tetrapyrrole methylase CV728_03250 IPR029064 50S ribosomal protein L30e-like CV728_03250 IPR001537 tRNA/rRNA methyltransferase, SpoU type CV728_03250 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CV728_03250 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CV728_03250 IPR029028 Alpha/beta knot methyltransferases CV728_03275 IPR001095 Acetyl-CoA carboxylase, alpha subunit CV728_03275 IPR029045 ClpP/crotonase-like domain superfamily CV728_03275 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CV728_03280 IPR014031 Beta-ketoacyl synthase, C-terminal CV728_03280 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CV728_03280 IPR014030 Beta-ketoacyl synthase, N-terminal CV728_03280 IPR018201 Beta-ketoacyl synthase, active site CV728_03280 IPR000794 Beta-ketoacyl synthase CV728_03280 IPR016039 Thiolase-like CV728_03280 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CV728_03285 IPR036736 ACP-like superfamily CV728_03285 IPR003231 Acyl carrier protein (ACP) CV728_03285 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CV728_03285 IPR009081 Phosphopantetheine binding ACP domain CV728_03285 IPR006162 Phosphopantetheine attachment site CV728_03290 IPR036291 NAD(P)-binding domain superfamily CV728_03290 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CV728_03290 IPR020904 Short-chain dehydrogenase/reductase, conserved site CV728_03290 IPR002347 Short-chain dehydrogenase/reductase SDR CV728_03295 IPR018278 Ribosomal protein S21, conserved site CV728_03295 IPR001911 Ribosomal protein S21 CV728_03295 IPR038380 Ribosomal protein S21 superfamily CV728_03310 IPR007339 Inner membrane protein RclC-like CV728_03315 IPR001653 Diaminopimelate epimerase, DapF CV728_03315 IPR018510 Diaminopimelate epimerase, active site CV728_03320 IPR002549 Transmembrane protein TqsA-like CV728_03330 IPR023192 TGS-like domain superfamily CV728_03330 IPR012676 TGS-like CV728_03330 IPR004095 TGS CV728_03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03330 IPR041706 YchF, N-terminal CV728_03330 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CV728_03330 IPR012675 Beta-grasp domain superfamily CV728_03330 IPR031167 OBG-type guanine nucleotide-binding (G) domain CV728_03330 IPR006073 GTP binding domain CV728_03330 IPR013029 YchF, C-terminal domain CV728_03335 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CV728_03335 IPR023042 Peptidase M17, leucine aminopeptidase CV728_03335 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CV728_03335 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CV728_03345 IPR005764 Adenine phosphoribosyl transferase CV728_03345 IPR029057 Phosphoribosyltransferase-like CV728_03345 IPR000836 Phosphoribosyltransferase domain CV728_03355 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CV728_03355 IPR004785 Ribose 5-phosphate isomerase B CV728_03355 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily CV728_03360 IPR008915 Peptidase M50 CV728_03365 IPR036286 LexA/Signal peptidase-like superfamily CV728_03365 IPR000223 Peptidase S26A, signal peptidase I CV728_03365 IPR019758 Peptidase S26A, signal peptidase I, conserved site CV728_03365 IPR019533 Peptidase S26 CV728_03370 IPR036291 NAD(P)-binding domain superfamily CV728_03370 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CV728_03370 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CV728_03370 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CV728_03370 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CV728_03390 IPR032466 Metal-dependent hydrolase CV728_03390 IPR004721 Dihydroorotase homodimeric type CV728_03390 IPR002195 Dihydroorotase, conserved site CV728_03405 IPR036429 SpoA-like superfamily CV728_03405 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CV728_03405 IPR012826 Flagellar motor switch FliN CV728_03405 IPR007597 CheC-like protein CV728_03405 IPR001543 Surface presentation of antigen (SpoA) CV728_03405 IPR028976 CheC-like superfamily CV728_03410 IPR011257 DNA glycosylase CV728_03410 IPR004036 Endonuclease III-like, conserved site-2 CV728_03410 IPR003265 HhH-GPD domain CV728_03410 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CV728_03410 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CV728_03410 IPR005759 Endonuclease III CV728_03410 IPR000445 Helix-hairpin-helix motif CV728_03415 IPR038157 Ferrous iron transporter, core domain CV728_03415 IPR008988 Transcriptional repressor, C-terminal CV728_03415 IPR007167 Ferrous iron transporter FeoA domain CV728_03435 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit CV728_03435 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CV728_03435 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CV728_03435 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CV728_03435 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CV728_03435 IPR029061 Thiamin diphosphate-binding fold CV728_03435 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CV728_03440 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CV728_03440 IPR029061 Thiamin diphosphate-binding fold CV728_03475 IPR036950 Penicillin binding protein transglycosylase domain CV728_03475 IPR012338 Beta-lactamase/transpeptidase-like CV728_03475 IPR023346 Lysozyme-like domain superfamily CV728_03475 IPR001460 Penicillin-binding protein, transpeptidase CV728_03475 IPR001264 Glycosyl transferase, family 51 CV728_03480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_03480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_03480 IPR004839 Aminotransferase, class I/classII CV728_03480 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CV728_03480 IPR015424 Pyridoxal phosphate-dependent transferase CV728_03485 IPR003660 HAMP domain CV728_03485 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CV728_03485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CV728_03485 IPR000727 Target SNARE coiled-coil homology domain CV728_03485 IPR004090 Chemotaxis methyl-accepting receptor CV728_03500 IPR001492 Flagellin CV728_03500 IPR001029 Flagellin, D0/D1 domain CV728_03500 IPR010810 Flagellin hook, IN motif CV728_03515 IPR038071 UROD/MetE-like superfamily CV728_03515 IPR006361 Uroporphyrinogen decarboxylase HemE CV728_03515 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CV728_03530 IPR001036 Acriflavin resistance protein CV728_03530 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CV728_03540 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CV728_03540 IPR005671 2-isopropylmalate synthase, bacterial-type CV728_03540 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CV728_03540 IPR000891 Pyruvate carboxyltransferase CV728_03540 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CV728_03540 IPR013785 Aldolase-type TIM barrel CV728_03550 IPR003593 AAA+ ATPase domain CV728_03550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03550 IPR003439 ABC transporter-like CV728_03550 IPR017871 ABC transporter, conserved site CV728_03560 IPR010994 RuvA domain 2-like CV728_03560 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CV728_03560 IPR004150 NAD-dependent DNA ligase, OB-fold CV728_03560 IPR012340 Nucleic acid-binding, OB-fold CV728_03560 IPR018239 NAD-dependent DNA ligase, active site CV728_03560 IPR033136 NAD-dependent DNA ligase, conserved site CV728_03560 IPR001679 NAD-dependent DNA ligase CV728_03560 IPR013839 NAD-dependent DNA ligase, adenylation CV728_03560 IPR013840 NAD-dependent DNA ligase, N-terminal CV728_03560 IPR001357 BRCT domain CV728_03560 IPR036420 BRCT domain superfamily CV728_03565 IPR011006 CheY-like superfamily CV728_03565 IPR001789 Signal transduction response regulator, receiver domain CV728_03570 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CV728_03570 IPR006195 Aminoacyl-tRNA synthetase, class II CV728_03570 IPR004524 Aspartate-tRNA ligase, type 1 CV728_03570 IPR004115 GAD-like domain superfamily CV728_03570 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CV728_03570 IPR029351 GAD domain CV728_03570 IPR012340 Nucleic acid-binding, OB-fold CV728_03570 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CV728_03575 IPR000850 Adenylate kinase/UMP-CMP kinase CV728_03575 IPR033690 Adenylate kinase, conserved site CV728_03575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03590 IPR036649 Inorganic pyrophosphatase superfamily CV728_03590 IPR008162 Inorganic pyrophosphatase CV728_03595 IPR005747 Endonuclease MutS2 CV728_03595 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CV728_03595 IPR007696 DNA mismatch repair protein MutS, core CV728_03595 IPR000432 DNA mismatch repair protein MutS, C-terminal CV728_03595 IPR002625 Smr domain CV728_03595 IPR036063 Smr domain superfamily CV728_03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03605 IPR036615 Mur ligase, C-terminal domain superfamily CV728_03605 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CV728_03605 IPR000713 Mur ligase, N-terminal catalytic domain CV728_03605 IPR013221 Mur ligase, central CV728_03605 IPR004101 Mur ligase, C-terminal CV728_03605 IPR036565 Mur-like, catalytic domain superfamily CV728_03610 IPR004839 Aminotransferase, class I/classII CV728_03610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_03610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_03610 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CV728_03610 IPR015424 Pyridoxal phosphate-dependent transferase CV728_03615 IPR011005 Dihydropteroate synthase-like CV728_03615 IPR036849 Enolase-like, C-terminal domain superfamily CV728_03615 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CV728_03615 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CV728_03620 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily CV728_03620 IPR011004 Trimeric LpxA-like superfamily CV728_03620 IPR001451 Hexapeptide repeat CV728_03620 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family CV728_03620 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain CV728_03635 IPR003680 Flavodoxin-like fold CV728_03635 IPR029039 Flavoprotein-like superfamily CV728_03640 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CV728_03640 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CV728_03640 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily CV728_03640 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CV728_03640 IPR006311 Twin-arginine translocation pathway, signal sequence CV728_03640 IPR001821 [NiFe]-hydrogenase, small subunit CV728_03640 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CV728_03645 IPR001501 Nickel-dependent hydrogenase, large subunit CV728_03645 IPR029014 [NiFe]-hydrogenase, large subunit CV728_03645 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CV728_03650 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit CV728_03650 IPR016174 Di-haem cytochrome, transmembrane CV728_03650 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CV728_03655 IPR023430 Peptidase HybD-like domain superfamily CV728_03655 IPR000671 Peptidase A31 family CV728_03680 IPR018317 Queuosine biosynthesis protein QueC CV728_03680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_03690 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CV728_03690 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CV728_03690 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CV728_03690 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CV728_03690 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CV728_03690 IPR036291 NAD(P)-binding domain superfamily CV728_03690 IPR030876 3-sulfolactaldehyde reductase CV728_03690 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CV728_03695 IPR033878 Nitroreductase NfsB-like CV728_03695 IPR029479 Nitroreductase CV728_03695 IPR000415 Nitroreductase-like CV728_03700 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CV728_03700 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CV728_03700 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CV728_03700 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CV728_03700 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CV728_03700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_03700 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CV728_03705 IPR003425 CCB3/YggT CV728_03710 IPR023664 Murein transglycosylase-C CV728_03710 IPR024570 Murein transglycosylase-C, N-terminal CV728_03710 IPR000189 Prokaryotic transglycosylase, active site CV728_03710 IPR008258 Transglycosylase SLT domain 1 CV728_03710 IPR023346 Lysozyme-like domain superfamily CV728_03715 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CV728_03715 IPR005835 Nucleotidyl transferase domain CV728_03715 IPR029044 Nucleotide-diphospho-sugar transferases CV728_03725 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CV728_03725 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CV728_03725 IPR036968 Enolpyruvate transferase domain superfamily CV728_03725 IPR001986 Enolpyruvate transferase domain CV728_03730 IPR020557 Fumarate lyase, conserved site CV728_03730 IPR000362 Fumarate lyase family CV728_03730 IPR024083 Fumarase/histidase, N-terminal CV728_03730 IPR018951 Fumarase C, C-terminal CV728_03730 IPR022761 Fumarate lyase, N-terminal CV728_03730 IPR008948 L-Aspartase-like CV728_03730 IPR004708 Aspartate ammonia-lyase CV728_03740 IPR016646 Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, Helicobacter CV728_03740 IPR041058 Alpha-(1,3)-fucosyltransferase FucT, N-terminal CV728_03740 IPR001503 Glycosyl transferase family 10 CV728_03740 IPR038577 GT10-like superfamily CV728_03745 IPR036412 HAD-like superfamily CV728_03745 IPR023214 HAD superfamily CV728_03750 IPR001519 Ferritin CV728_03750 IPR009078 Ferritin-like superfamily CV728_03750 IPR009040 Ferritin-like diiron domain CV728_03750 IPR012347 Ferritin-like CV728_03750 IPR041719 Ferritin, prokaryotic-type CV728_03750 IPR008331 Ferritin/DPS protein domain CV728_03755 IPR022432 Aminodeoxyfutalosine synthase CV728_03755 IPR013785 Aldolase-type TIM barrel CV728_03755 IPR034405 F420, menaquinone cofactor biosynthesis CV728_03755 IPR020050 FO synthase, subunit 2 CV728_03755 IPR006638 Elp3/MiaB/NifB CV728_03755 IPR007197 Radical SAM CV728_03760 IPR000184 Bacterial surface antigen (D15) CV728_03760 IPR010827 POTRA domain, BamA/TamA-like CV728_03760 IPR039910 Surface antigen D15-like CV728_03760 IPR034746 POTRA domain CV728_03760 IPR023707 Outer membrane protein assembly factor BamA CV728_03765 IPR013785 Aldolase-type TIM barrel CV728_03765 IPR022431 Cyclic dehypoxanthine futalosine synthase CV728_03765 IPR007197 Radical SAM CV728_03765 IPR020050 FO synthase, subunit 2 CV728_03765 IPR034405 F420, menaquinone cofactor biosynthesis CV728_03765 IPR006638 Elp3/MiaB/NifB CV728_03775 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CV728_03775 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CV728_03775 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CV728_03775 IPR018027 Asn/Gln amidotransferase CV728_03775 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CV728_03775 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CV728_03775 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CV728_03775 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CV728_03775 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CV728_03790 IPR022892 Ribonuclease HI CV728_03790 IPR002156 Ribonuclease H domain CV728_03790 IPR012337 Ribonuclease H-like superfamily CV728_03790 IPR036397 Ribonuclease H superfamily CV728_03795 IPR014720 Double-stranded RNA-binding domain CV728_03795 IPR011907 Ribonuclease III CV728_03795 IPR000999 Ribonuclease III domain CV728_03795 IPR036389 Ribonuclease III, endonuclease domain superfamily CV728_03800 IPR000453 Chorismate synthase CV728_03800 IPR020541 Chorismate synthase, conserved site CV728_03800 IPR035904 Chorismate synthase AroC superfamily CV728_03805 IPR019724 Uncharacterised protein family UPF0763 CV728_03810 IPR023404 Radical SAM, alpha/beta horseshoe CV728_03810 IPR034505 Anaerobic coproporphyrinogen-III oxidase CV728_03810 IPR006638 Elp3/MiaB/NifB CV728_03810 IPR010723 HemN, C-terminal CV728_03810 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CV728_03810 IPR007197 Radical SAM CV728_03815 IPR022822 Lactate utilization protein A CV728_03815 IPR004017 Cysteine-rich domain CV728_03830 IPR015424 Pyridoxal phosphate-dependent transferase CV728_03830 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CV728_03830 IPR004839 Aminotransferase, class I/classII CV728_03830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_03830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_03840 IPR002104 Integrase, catalytic domain CV728_03840 IPR041308 Xer recombinase, N-terminal CV728_03840 IPR033683 Tyrosine recombinase XerH CV728_03840 IPR011010 DNA breaking-rejoining enzyme, catalytic core CV728_03840 IPR013762 Integrase-like, catalytic domain superfamily CV728_03845 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CV728_03845 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_03845 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CV728_03845 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CV728_03845 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CV728_03845 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CV728_03845 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CV728_03850 IPR002781 Transmembrane protein TauE-like CV728_03855 IPR004104 Oxidoreductase, C-terminal CV728_03855 IPR036291 NAD(P)-binding domain superfamily CV728_03855 IPR000683 Oxidoreductase, N-terminal CV728_03860 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CV728_03860 IPR013509 Ribonucleotide reductase large subunit, N-terminal CV728_03860 IPR000788 Ribonucleotide reductase large subunit, C-terminal CV728_03860 IPR013346 Ribonucleotide reductase, class I , alpha subunit CV728_03860 IPR005144 ATP-cone domain CV728_03860 IPR039718 Ribonucleoside-diphosphate reductase large subunit CV728_03875 IPR011004 Trimeric LpxA-like superfamily CV728_03875 IPR029044 Nucleotide-diphospho-sugar transferases CV728_03875 IPR025877 MobA-like NTP transferase CV728_03875 IPR018357 Hexapeptide transferase, conserved site CV728_03875 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CV728_03875 IPR038009 GlmU, C-terminal LbH domain CV728_03875 IPR001451 Hexapeptide repeat CV728_03885 IPR005837 Flagellar transport protein FliP CV728_03885 IPR005838 Type III secretion system inner membrane P protein CV728_03895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03895 IPR030389 FeoB-type guanine nucleotide-binding (G) domain CV728_03895 IPR011640 Ferrous iron transport protein B, C-terminal CV728_03895 IPR003373 Ferrous iron transport protein B CV728_03895 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CV728_03905 IPR020617 Thiolase, C-terminal CV728_03905 IPR020616 Thiolase, N-terminal CV728_03905 IPR020613 Thiolase, conserved site CV728_03905 IPR020610 Thiolase, active site CV728_03905 IPR016039 Thiolase-like CV728_03905 IPR020615 Thiolase, acyl-enzyme intermediate active site CV728_03905 IPR002155 Thiolase CV728_03910 IPR037171 NagB/RpiA transferase-like CV728_03910 IPR004165 Coenzyme A transferase family I CV728_03910 IPR012792 3-oxoacid CoA-transferase, subunit A CV728_03910 IPR004163 Coenzyme A transferase binding site CV728_03915 IPR037171 NagB/RpiA transferase-like CV728_03915 IPR004165 Coenzyme A transferase family I CV728_03915 IPR012791 3-oxoacid CoA-transferase, subunit B CV728_03915 IPR004164 Coenzyme A transferase active site CV728_03920 IPR006160 Short chain fatty acid transporter AtoE CV728_03920 IPR006161 Conserved hypothetical protein CHP00336 CV728_03930 IPR002821 Hydantoinase A/oxoprolinase CV728_03930 IPR008040 Hydantoinaseoxoprolinase, N-terminal CV728_03935 IPR003692 Hydantoinase B/oxoprolinase CV728_03940 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit CV728_03950 IPR036945 Diacylglycerol kinase (DAGK) superfamily CV728_03950 IPR000829 DAGK family CV728_03950 IPR033718 Diacylglycerol kinase, prokaryotic CV728_03955 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CV728_03955 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CV728_03955 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CV728_03955 IPR005743 DNA gyrase, subunit A CV728_03955 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CV728_03955 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CV728_03955 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CV728_03965 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CV728_03965 IPR002078 RNA polymerase sigma factor 54 interaction domain CV728_03965 IPR002197 DNA binding HTH domain, Fis-type CV728_03965 IPR001789 Signal transduction response regulator, receiver domain CV728_03965 IPR003593 AAA+ ATPase domain CV728_03965 IPR025944 Sigma-54 interaction domain, conserved site CV728_03965 IPR011006 CheY-like superfamily CV728_03965 IPR009057 Homeobox-like domain superfamily CV728_03965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03965 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CV728_03980 IPR017871 ABC transporter, conserved site CV728_03980 IPR041552 UvrA DNA-binding domain CV728_03980 IPR004602 UvrABC system subunit A CV728_03980 IPR003439 ABC transporter-like CV728_03980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_03980 IPR041102 UvrA, interaction domain CV728_03990 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CV728_03990 IPR002903 Ribosomal RNA small subunit methyltransferase H CV728_03990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_04000 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal CV728_04000 IPR002747 SAM-dependent chlorinase/fluorinase CV728_04000 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal CV728_04015 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CV728_04015 IPR007634 RNA polymerase sigma factor 54, DNA-binding CV728_04015 IPR007046 RNA polymerase sigma factor 54, core-binding domain CV728_04015 IPR000394 RNA polymerase sigma factor 54 CV728_04020 IPR003593 AAA+ ATPase domain CV728_04020 IPR017871 ABC transporter, conserved site CV728_04020 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CV728_04020 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CV728_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04020 IPR003439 ABC transporter-like CV728_04035 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CV728_04035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04035 IPR003593 AAA+ ATPase domain CV728_04035 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CV728_04035 IPR022754 DNA polymerase III, gamma subunit, domain III CV728_04035 IPR012763 DNA polymerase III, subunit gamma/ tau CV728_04035 IPR021029 DNA polymerase III, tau subunit, domain V CV728_04040 IPR001123 Amino acid exporter protein, LeuE-type CV728_04040 IPR004777 L-lysine exporter/arginine exporter CV728_04060 IPR004550 L-asparaginase, type II CV728_04060 IPR020827 Asparaginase/glutaminase, active site 1 CV728_04060 IPR027475 Asparaginase/glutaminase, active site 2 CV728_04060 IPR040919 Asparaginase/glutaminase, C-terminal CV728_04060 IPR027473 L-asparaginase, C-terminal CV728_04060 IPR027474 L-asparaginase, N-terminal CV728_04060 IPR036152 Asparaginase/glutaminase-like superfamily CV728_04060 IPR006034 Asparaginase/glutaminase-like CV728_04060 IPR037152 L-asparaginase, N-terminal domain superfamily CV728_04065 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CV728_04080 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CV728_04080 IPR013785 Aldolase-type TIM barrel CV728_04080 IPR018517 tRNA-dihydrouridine synthase, conserved site CV728_04080 IPR001269 tRNA-dihydrouridine synthase CV728_04080 IPR035587 DUS-like, FMN-binding domain CV728_04085 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CV728_04085 IPR012094 tRNA(Ile)-lysidine synthase CV728_04085 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CV728_04085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_04125 IPR004346 CagE, TrbE, VirB component of type IV transporter system CV728_04125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04125 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CV728_04125 IPR023298 P-type ATPase, transmembrane domain superfamily CV728_04130 IPR013497 DNA topoisomerase, type IA, central CV728_04130 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CV728_04130 IPR023406 DNA topoisomerase, type IA, active site CV728_04130 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CV728_04130 IPR006171 TOPRIM domain CV728_04130 IPR023405 DNA topoisomerase, type IA, core domain CV728_04130 IPR003601 DNA topoisomerase, type IA, domain 2 CV728_04130 IPR000380 DNA topoisomerase, type IA CV728_04130 IPR034149 DNA topoisomerase 1, TOPRIM domain CV728_04130 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CV728_04130 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CV728_04130 IPR028612 DNA topoisomerase I, type IA CV728_04130 IPR005733 DNA topoisomerase I, bacterial-type CV728_04165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04165 IPR003593 AAA+ ATPase domain CV728_04165 IPR014155 Type IV secretion system protein VirB11 CV728_04165 IPR001482 Type II/IV secretion system protein CV728_04185 IPR003688 Type IV secretion system protein TraG/VirD4 CV728_04185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04195 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CV728_04195 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CV728_04195 IPR004386 Toxin-antitoxin system, YafQ-like toxin CV728_04220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04220 IPR025669 AAA domain CV728_04260 IPR010095 Transposase IS605, OrfB, C-terminal CV728_04260 IPR001959 Probable transposase, IS891/IS1136/IS1341 CV728_04260 IPR021027 Transposase, putative, helix-turn-helix domain CV728_04265 IPR002686 Transposase IS200-like CV728_04265 IPR036515 Transposase IS200-like superfamily CV728_04280 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CV728_04280 IPR007197 Radical SAM CV728_04280 IPR023404 Radical SAM, alpha/beta horseshoe CV728_04280 IPR013848 Methylthiotransferase, N-terminal CV728_04280 IPR038135 Methylthiotransferase, N-terminal domain superfamily CV728_04280 IPR006638 Elp3/MiaB/NifB CV728_04280 IPR020612 Methylthiotransferase, conserved site CV728_04280 IPR005839 Methylthiotransferase CV728_04285 IPR023747 Xanthine-guanine phosphoribosyltransferase CV728_04285 IPR029057 Phosphoribosyltransferase-like CV728_04285 IPR000836 Phosphoribosyltransferase domain CV728_04290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_04290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_04290 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CV728_04290 IPR000192 Aminotransferase class V domain CV728_04290 IPR015424 Pyridoxal phosphate-dependent transferase CV728_04295 IPR007686 YutG/PgpA domain CV728_04295 IPR026037 Phosphatidylglycerophosphatase A CV728_04295 IPR036681 PgpA-like superfamily CV728_04300 IPR011095 D-alanine--D-alanine ligase, C-terminal CV728_04300 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CV728_04300 IPR016185 Pre-ATP-grasp domain superfamily CV728_04300 IPR013815 ATP-grasp fold, subdomain 1 CV728_04300 IPR011761 ATP-grasp fold CV728_04300 IPR005905 D-alanine--D-alanine ligase CV728_04300 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CV728_04310 IPR035911 MurE/MurF, N-terminal CV728_04310 IPR004101 Mur ligase, C-terminal CV728_04310 IPR036615 Mur ligase, C-terminal domain superfamily CV728_04310 IPR013221 Mur ligase, central CV728_04310 IPR000713 Mur ligase, N-terminal catalytic domain CV728_04310 IPR036565 Mur-like, catalytic domain superfamily CV728_04310 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CV728_04315 IPR011146 HIT-like domain CV728_04315 IPR001310 Histidine triad (HIT) protein CV728_04315 IPR039383 FHIT family CV728_04315 IPR036265 HIT-like superfamily CV728_04320 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CV728_04320 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CV728_04320 IPR029057 Phosphoribosyltransferase-like CV728_04320 IPR005946 Ribose-phosphate pyrophosphokinase CV728_04320 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CV728_04320 IPR000836 Phosphoribosyltransferase domain CV728_04330 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CV728_04330 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CV728_04330 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CV728_04340 IPR016478 GTPase, MTG1 CV728_04340 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CV728_04340 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily CV728_04340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04340 IPR019991 GTP-binding protein, ribosome biogenesis CV728_04340 IPR006073 GTP binding domain CV728_04350 IPR036986 RNA-binding S4 domain superfamily CV728_04350 IPR006145 Pseudouridine synthase, RsuA/RluA CV728_04350 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CV728_04350 IPR006225 Pseudouridine synthase, RluC/RluD CV728_04350 IPR020103 Pseudouridine synthase, catalytic domain superfamily CV728_04350 IPR002942 RNA-binding S4 domain CV728_04360 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CV728_04360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_04365 IPR003439 ABC transporter-like CV728_04365 IPR017871 ABC transporter, conserved site CV728_04365 IPR003593 AAA+ ATPase domain CV728_04365 IPR005286 Cell division protein FtsE, ATP-binding CV728_04365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04390 IPR003713 Flagellar protein FliS CV728_04390 IPR036584 Flagellar protein FliS superfamily CV728_04400 IPR012730 Molybdopterin synthase sulfurylase MoeB CV728_04400 IPR035985 Ubiquitin-activating enzyme CV728_04400 IPR000594 THIF-type NAD/FAD binding fold CV728_04410 IPR003010 Carbon-nitrogen hydrolase CV728_04410 IPR036526 Carbon-nitrogen hydrolase superfamily CV728_04415 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CV728_04415 IPR032813 Putative Na+/H+ antiporter, N-terminal CV728_04420 IPR002528 Multi antimicrobial extrusion protein CV728_04425 IPR004088 K Homology domain, type 1 CV728_04425 IPR006675 HDIG domain CV728_04425 IPR003607 HD/PDEase domain CV728_04425 IPR006674 HD domain CV728_04425 IPR022711 Ribonuclease Y, N-terminal CV728_04425 IPR017705 Ribonuclease Y CV728_04425 IPR004087 K Homology domain CV728_04425 IPR036612 K Homology domain, type 1 superfamily CV728_04440 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CV728_04440 IPR004390 Signal-recognition particle receptor FtsY CV728_04440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04440 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CV728_04460 IPR013785 Aldolase-type TIM barrel CV728_04460 IPR006638 Elp3/MiaB/NifB CV728_04460 IPR010505 Molybdenum cofactor synthesis C-terminal CV728_04460 IPR007197 Radical SAM CV728_04460 IPR013483 Molybdenum cofactor biosynthesis protein A CV728_04460 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CV728_04465 IPR013482 Molybdenum cofactor guanylyltransferase CV728_04465 IPR025877 MobA-like NTP transferase CV728_04465 IPR029044 Nucleotide-diphospho-sugar transferases CV728_04470 IPR029025 Type III secretion system substrate exporter, C-terminal CV728_04470 IPR006136 Flagellar biosynthetic protein FlhB CV728_04470 IPR006135 Type III secretion system substrate exporter CV728_04480 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CV728_04490 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CV728_04490 IPR002307 Tyrosine-tRNA ligase CV728_04490 IPR036986 RNA-binding S4 domain superfamily CV728_04490 IPR002942 RNA-binding S4 domain CV728_04490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_04490 IPR002305 Aminoacyl-tRNA synthetase, class Ic CV728_04490 IPR024088 Tyrosine-tRNA ligase, bacterial-type CV728_04490 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CV728_04495 IPR012675 Beta-grasp domain superfamily CV728_04495 IPR012676 TGS-like CV728_04495 IPR004095 TGS CV728_04495 IPR007685 RelA/SpoT CV728_04495 IPR004811 RelA/SpoT family CV728_04495 IPR003607 HD/PDEase domain CV728_04495 IPR033655 RelA, TGS domain CV728_04495 IPR002912 ACT domain CV728_04500 IPR036161 RPB6/omega subunit-like superfamily CV728_04500 IPR012293 RNA polymerase subunit, RPB6/omega CV728_04500 IPR006110 RNA polymerase, subunit omega/K/RPB6 CV728_04500 IPR003716 DNA-directed RNA polymerase, omega subunit CV728_04505 IPR011817 Uridylate kinase CV728_04505 IPR036393 Acetylglutamate kinase-like superfamily CV728_04505 IPR001048 Aspartate/glutamate/uridylate kinase CV728_04505 IPR015963 Uridylate kinase, bacteria CV728_04545 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CV728_04545 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CV728_04545 IPR029046 Lipoprotein localisation LolA/LolB/LppX CV728_04550 IPR014018 SecA motor DEAD CV728_04550 IPR036670 SecA, preprotein cross-linking domain superfamily CV728_04550 IPR036266 SecA, Wing/Scaffold superfamily CV728_04550 IPR011115 SecA DEAD-like, N-terminal CV728_04550 IPR020937 SecA conserved site CV728_04550 IPR000185 Protein translocase subunit SecA CV728_04550 IPR004027 SEC-C motif CV728_04550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04550 IPR011130 SecA, preprotein cross-linking domain CV728_04550 IPR011116 SecA Wing/Scaffold CV728_04580 IPR036163 Heavy metal-associated domain superfamily CV728_04580 IPR023298 P-type ATPase, transmembrane domain superfamily CV728_04580 IPR001757 P-type ATPase CV728_04580 IPR006121 Heavy metal-associated domain, HMA CV728_04580 IPR027256 P-type ATPase, subfamily IB CV728_04580 IPR023214 HAD superfamily CV728_04580 IPR036412 HAD-like superfamily CV728_04580 IPR008250 P-type ATPase, A domain superfamily CV728_04580 IPR018303 P-type ATPase, phosphorylation site CV728_04580 IPR023299 P-type ATPase, cytoplasmic domain N CV728_04580 IPR017969 Heavy-metal-associated, conserved site CV728_04585 IPR003593 AAA+ ATPase domain CV728_04585 IPR001208 MCM domain CV728_04585 IPR004482 Mg chelatase-related protein CV728_04585 IPR025158 Mg chelatase-related protein, C-terminal domain CV728_04585 IPR000523 Magnesium chelatase ChlI domain CV728_04585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04585 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_04585 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_04590 IPR023635 Peptide deformylase CV728_04590 IPR036821 Peptide deformylase superfamily CV728_04600 IPR037041 Trigger factor, C-terminal domain superfamily CV728_04600 IPR036611 Trigger factor ribosome-binding domain superfamily CV728_04600 IPR027304 Trigger factor/SurA domain superfamily CV728_04600 IPR008880 Trigger factor, C-terminal CV728_04600 IPR005215 Trigger factor CV728_04600 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CV728_04600 IPR008881 Trigger factor, ribosome-binding, bacterial CV728_04610 IPR038531 Neuraminyllactose-binding hemagglutinin superfamily CV728_04610 IPR007876 Neuraminyllactose-binding hemagglutinin CV728_04615 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CV728_04615 IPR023045 Molybdenum cofactor biosynthesis C CV728_04615 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CV728_04620 IPR008284 Molybdenum cofactor biosynthesis, conserved site CV728_04620 IPR001453 MoaB/Mog domain CV728_04620 IPR036425 MoaB/Mog-like domain superfamily CV728_04625 IPR003448 Molybdopterin biosynthesis MoaE CV728_04625 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CV728_04635 IPR036144 RibA-like superfamily CV728_04635 IPR032677 GTP cyclohydrolase II CV728_04635 IPR000926 GTP cyclohydrolase II, RibA CV728_04645 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CV728_04645 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CV728_04645 IPR032677 GTP cyclohydrolase II CV728_04645 IPR036144 RibA-like superfamily CV728_04665 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CV728_04665 IPR002582 Holo-[acyl carrier protein] synthase CV728_04665 IPR004568 Phosphopantetheine-protein transferase domain CV728_04665 IPR008278 4'-phosphopantetheinyl transferase domain CV728_04670 IPR005503 Flagellar basal body-associated protein FliL CV728_04690 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CV728_04690 IPR001279 Metallo-beta-lactamase CV728_04695 IPR000594 THIF-type NAD/FAD binding fold CV728_04695 IPR035985 Ubiquitin-activating enzyme CV728_04700 IPR000540 Flagellar motor protein MotA, conserved site CV728_04700 IPR002898 MotA/TolQ/ExbB proton channel CV728_04705 IPR036737 OmpA-like domain superfamily CV728_04705 IPR006665 OmpA-like domain CV728_04705 IPR025713 Motility protein B, N-terminal domain CV728_04715 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CV728_04720 IPR003593 AAA+ ATPase domain CV728_04720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04720 IPR003439 ABC transporter-like CV728_04720 IPR005892 Glycine betaine transport ATP-binding subunit CV728_04720 IPR000644 CBS domain CV728_04720 IPR017871 ABC transporter, conserved site CV728_04735 IPR035901 GIY-YIG endonuclease superfamily CV728_04735 IPR001943 UVR domain CV728_04735 IPR036876 UVR domain superfamily CV728_04735 IPR004791 UvrABC system, subunit C CV728_04735 IPR010994 RuvA domain 2-like CV728_04735 IPR038476 UvrC homology region 2 superfamily CV728_04735 IPR001162 UvrC family homology region CV728_04735 IPR000305 GIY-YIG endonuclease CV728_04740 IPR036291 NAD(P)-binding domain superfamily CV728_04740 IPR019811 Homoserine dehydrogenase, conserved site CV728_04740 IPR016204 Homoserine dehydrogenase CV728_04740 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CV728_04740 IPR002912 ACT domain CV728_04740 IPR001342 Homoserine dehydrogenase, catalytic CV728_04745 IPR011335 Restriction endonuclease type II-like CV728_04745 IPR011856 tRNA endonuclease-like domain superfamily CV728_04745 IPR003509 Uncharacterised protein family UPF0102 CV728_04750 IPR005746 Thioredoxin CV728_04750 IPR036249 Thioredoxin-like superfamily CV728_04750 IPR013766 Thioredoxin domain CV728_04750 IPR017937 Thioredoxin, conserved site CV728_04755 IPR036188 FAD/NAD(P)-binding domain superfamily CV728_04755 IPR023753 FAD/NAD(P)-binding domain CV728_04755 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CV728_04755 IPR005982 Thioredoxin reductase CV728_04765 IPR000504 RNA recognition motif domain CV728_04765 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CV728_04765 IPR035979 RNA-binding domain superfamily CV728_04770 IPR000568 ATP synthase, F0 complex, subunit A CV728_04770 IPR023011 ATP synthase, F0 complex, subunit A, active site CV728_04770 IPR035908 ATP synthase, F0 complex, subunit A superfamily CV728_04775 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CV728_04775 IPR013785 Aldolase-type TIM barrel CV728_04775 IPR001093 IMP dehydrogenase/GMP reductase CV728_04775 IPR005990 Inosine-5'-monophosphate dehydrogenase CV728_04775 IPR000644 CBS domain CV728_04780 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CV728_04780 IPR036928 Amidase signature (AS) superfamily CV728_04780 IPR023631 Amidase signature domain CV728_04780 IPR020556 Amidase, conserved site CV728_04780 IPR000120 Amidase CV728_04785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04785 IPR001977 Dephospho-CoA kinase CV728_04790 IPR030374 Polyamine biosynthesis domain CV728_04790 IPR001045 Spermidine/spermine synthases CV728_04790 IPR035246 Spermidine synthase, tetramerisation domain CV728_04790 IPR037163 Spermidine synthase, tetramerisation domain superfamily CV728_04790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_04800 IPR016484 GTP-binding protein EngA CV728_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04800 IPR015946 K homology domain-like, alpha/beta CV728_04800 IPR032859 GTPase Der, C-terminal KH-domain-like CV728_04800 IPR006073 GTP binding domain CV728_04800 IPR005225 Small GTP-binding protein domain CV728_04800 IPR031166 EngA-type guanine nucleotide-binding (G) domain CV728_04805 IPR000119 Histone-like DNA-binding protein CV728_04805 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CV728_04830 IPR036291 NAD(P)-binding domain superfamily CV728_04830 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CV728_04830 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) CV728_04835 IPR036551 Flavin prenyltransferase-like CV728_04835 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CV728_04835 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CV728_04835 IPR035929 CoaB-like superfamily CV728_04835 IPR003382 Flavoprotein CV728_04845 IPR022998 Thiamine phosphate synthase/TenI CV728_04845 IPR013785 Aldolase-type TIM barrel CV728_04845 IPR036206 Thiamin phosphate synthase superfamily CV728_04845 IPR034291 Thiamine phosphate synthase CV728_04850 IPR029056 Ribokinase-like CV728_04850 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CV728_04850 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CV728_04855 IPR000417 Hydroxyethylthiazole kinase CV728_04855 IPR029056 Ribokinase-like CV728_04860 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_04860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04860 IPR004473 Restriction endonuclease, type I, HsdR CV728_04860 IPR022625 Type-1 restriction enzyme R protein, C-terminal CV728_04860 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CV728_04860 IPR040980 SWI2/SNF2 ATPase CV728_04865 IPR000055 Restriction endonuclease, type I, HsdS CV728_04880 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CV728_04880 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CV728_04890 IPR032781 ABC-transporter extension domain CV728_04890 IPR003593 AAA+ ATPase domain CV728_04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_04890 IPR003439 ABC transporter-like CV728_04895 IPR001093 IMP dehydrogenase/GMP reductase CV728_04895 IPR013785 Aldolase-type TIM barrel CV728_04895 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CV728_04895 IPR005994 Guanosine monophosphate reductase, type2 CV728_04900 IPR035461 GmhA/DiaA CV728_04900 IPR004515 Phosphoheptose isomerase CV728_04900 IPR001347 Sugar isomerase (SIS) CV728_04905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_04905 IPR029056 Ribokinase-like CV728_04905 IPR011913 RfaE bifunctional protein, domain I CV728_04905 IPR011611 Carbohydrate kinase PfkB CV728_04905 IPR004821 Cytidyltransferase-like domain CV728_04905 IPR023030 Bifunctional protein HldE CV728_04905 IPR011914 RfaE bifunctional protein, domain II CV728_04910 IPR036291 NAD(P)-binding domain superfamily CV728_04910 IPR001509 NAD-dependent epimerase/dehydratase CV728_04910 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CV728_04915 IPR036412 HAD-like superfamily CV728_04915 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CV728_04915 IPR023214 HAD superfamily CV728_04915 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CV728_04915 IPR006543 Histidinol-phosphate phosphatase CV728_04925 IPR004619 Type III pantothenate kinase CV728_04930 IPR036322 WD40-repeat-containing domain superfamily CV728_04930 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CV728_04930 IPR032737 Plasminogen-binding protein PgbA, C-terminal CV728_04940 IPR033704 dUTPase, trimeric CV728_04940 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CV728_04940 IPR036157 dUTPase-like superfamily CV728_04940 IPR029054 dUTPase-like CV728_04945 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CV728_04945 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CV728_04945 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CV728_04945 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CV728_04945 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CV728_04945 IPR006359 Transcription elongation factor GreA CV728_04945 IPR028624 Transcription elongation factor GreA/GreB CV728_04945 IPR023459 Transcription elongation factor GreA/GreB family CV728_04950 IPR003835 Glycosyl transferase, family 19 CV728_04960 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CV728_04960 IPR000688 Hydrogenase maturation factor HypA/HybF CV728_04965 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CV728_04965 IPR011491 Flagellar hook protein FlgE CV728_04965 IPR037058 Flagellar hook protein FlgE superfamily CV728_04965 IPR001444 Flagellar basal body rod protein, N-terminal CV728_04965 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CV728_04965 IPR010810 Flagellin hook, IN motif CV728_04965 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CV728_04965 IPR012835 Flagellar hook FlgE CV728_04970 IPR036265 HIT-like superfamily CV728_04970 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily CV728_04970 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial CV728_04970 IPR003763 CDP-diacylglycerol pyrophosphatase CV728_04980 IPR013987 PhnA protein, N-terminal CV728_04980 IPR013988 PhnA protein, C-terminal CV728_04980 IPR004624 PhnA protein CV728_04995 IPR037060 Catalase core domain superfamily CV728_04995 IPR018028 Catalase, mono-functional, haem-containing CV728_04995 IPR002226 Catalase haem-binding site CV728_04995 IPR010582 Catalase immune-responsive domain CV728_04995 IPR020835 Catalase superfamily CV728_04995 IPR011614 Catalase core domain CV728_04995 IPR040333 Catalase, clade 3 CV728_04995 IPR024708 Catalase active site CV728_04995 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CV728_05000 IPR010917 TonB-dependent receptor, conserved site CV728_05000 IPR037066 TonB-dependent receptor, plug domain superfamily CV728_05000 IPR039426 Vitamin B12 transporter BtuB-like CV728_05000 IPR012910 TonB-dependent receptor, plug domain CV728_05000 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CV728_05000 IPR010105 TonB-dependent siderophore receptor CV728_05000 IPR000531 TonB-dependent receptor-like, beta-barrel CV728_05005 IPR036397 Ribonuclease H superfamily CV728_05005 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CV728_05005 IPR002176 Crossover junction endodeoxyribonuclease RuvC CV728_05005 IPR012337 Ribonuclease H-like superfamily CV728_05065 IPR018117 DNA methylase, C-5 cytosine-specific, active site CV728_05065 IPR001525 C-5 cytosine methyltransferase CV728_05065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_05065 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CV728_05095 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CV728_05095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05095 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CV728_05095 IPR008995 Molybdate/tungstate binding, C-terminal CV728_05095 IPR017871 ABC transporter, conserved site CV728_05095 IPR003439 ABC transporter-like CV728_05095 IPR013611 Transport-associated OB, type 2 CV728_05095 IPR003593 AAA+ ATPase domain CV728_05100 IPR035906 MetI-like superfamily CV728_05100 IPR011867 Molybdate ABC transporter, permease protein CV728_05100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_05105 IPR005950 Molybdate ABC transporter, substrate-binding protein CV728_05115 IPR036291 NAD(P)-binding domain superfamily CV728_05115 IPR038770 Sodium/solute symporter superfamily CV728_05115 IPR020884 Glutathione-regulated potassium-efflux system protein KefB CV728_05115 IPR004771 K+/H+ exchanger CV728_05115 IPR006153 Cation/H+ exchanger CV728_05115 IPR003148 Regulator of K+ conductance, N-terminal CV728_05155 IPR003356 DNA methylase, adenine-specific CV728_05155 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_05155 IPR004546 Restriction endonuclease, type I, HsdM CV728_05155 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CV728_05155 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CV728_05155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_05170 IPR036832 Polyphosphate kinase N-terminal domain superfamily CV728_05170 IPR025198 Polyphosphate kinase N-terminal domain CV728_05170 IPR041108 Polyphosphate kinase, C-terminal domain 1 CV728_05170 IPR003414 Polyphosphate kinase CV728_05170 IPR036830 Polyphosphate kinase middle domain superfamily CV728_05170 IPR024953 Polyphosphate kinase middle domain CV728_05170 IPR025200 Polyphosphate kinase C-terminal domain 2 CV728_05175 IPR013785 Aldolase-type TIM barrel CV728_05175 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CV728_05175 IPR005719 Dihydroorotate dehydrogenase, class 2 CV728_05175 IPR001295 Dihydroorotate dehydrogenase, conserved site CV728_05175 IPR005720 Dihydroorotate dehydrogenase domain CV728_05185 IPR002220 DapA-like CV728_05185 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CV728_05185 IPR013785 Aldolase-type TIM barrel CV728_05185 IPR020625 Schiff base-forming aldolase, active site CV728_05190 IPR002347 Short-chain dehydrogenase/reductase SDR CV728_05190 IPR036291 NAD(P)-binding domain superfamily CV728_05200 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CV728_05200 IPR000462 CDP-alcohol phosphatidyltransferase CV728_05200 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CV728_05205 IPR004841 Amino acid permease/ SLC12A domain CV728_05205 IPR004840 Amino acid permease, conserved site CV728_05210 IPR001940 Peptidase S1C CV728_05210 IPR011782 Peptidase S1C, Do CV728_05210 IPR036034 PDZ superfamily CV728_05210 IPR041489 PDZ domain 6 CV728_05210 IPR001478 PDZ domain CV728_05210 IPR009003 Peptidase S1, PA clan CV728_05215 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CV728_05215 IPR026596 Bifunctional enzyme IspD/IspF CV728_05215 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CV728_05215 IPR034683 Cytidylyltransferase IspD/TarI CV728_05215 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CV728_05215 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CV728_05215 IPR029044 Nucleotide-diphospho-sugar transferases CV728_05220 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_05220 IPR001789 Signal transduction response regulator, receiver domain CV728_05220 IPR011006 CheY-like superfamily CV728_05220 IPR039420 Transcriptional regulatory protein WalR-like CV728_05220 IPR001867 OmpR/PhoB-type DNA-binding domain CV728_05220 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CV728_05225 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CV728_05225 IPR002421 5'-3' exonuclease, N-terminal CV728_05225 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CV728_05225 IPR002562 3'-5' exonuclease domain CV728_05225 IPR020045 DNA polymerase I-like, H3TH domain CV728_05225 IPR018320 DNA polymerase 1 CV728_05225 IPR036397 Ribonuclease H superfamily CV728_05225 IPR012337 Ribonuclease H-like superfamily CV728_05225 IPR029060 PIN-like domain superfamily CV728_05225 IPR008918 Helix-hairpin-helix motif, class 2 CV728_05225 IPR002298 DNA polymerase A CV728_05225 IPR019760 DNA-directed DNA polymerase, family A, conserved site CV728_05225 IPR001098 DNA-directed DNA polymerase, family A, palm domain CV728_05235 IPR002939 Chaperone DnaJ, C-terminal CV728_05235 IPR001623 DnaJ domain CV728_05235 IPR008971 HSP40/DnaJ peptide-binding CV728_05235 IPR036869 Chaperone J-domain superfamily CV728_05235 IPR018253 DnaJ domain, conserved site CV728_05240 IPR009061 Putative DNA-binding domain superfamily CV728_05240 IPR000551 MerR-type HTH domain CV728_05245 IPR021886 MgsA AAA+ ATPase C-terminal CV728_05245 IPR008824 RuvB-like P-loop domain CV728_05245 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CV728_05245 IPR032423 AAA C-terminal domain CV728_05245 IPR002589 Macro domain CV728_05245 IPR003593 AAA+ ATPase domain CV728_05245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05250 IPR036390 Winged helix DNA-binding domain superfamily CV728_05250 IPR002481 Ferric-uptake regulator CV728_05250 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_05265 IPR036429 SpoA-like superfamily CV728_05265 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CV728_05265 IPR012826 Flagellar motor switch FliN CV728_05265 IPR028976 CheC-like superfamily CV728_05265 IPR007597 CheC-like protein CV728_05265 IPR001543 Surface presentation of antigen (SpoA) CV728_05270 IPR001689 Flagellar motor switch protein FliM CV728_05270 IPR001543 Surface presentation of antigen (SpoA) CV728_05270 IPR036429 SpoA-like superfamily CV728_05270 IPR028976 CheC-like superfamily CV728_05275 IPR014284 RNA polymerase sigma-70 like domain CV728_05275 IPR000943 RNA polymerase sigma-70 CV728_05275 IPR007624 RNA polymerase sigma-70 region 3 CV728_05275 IPR007630 RNA polymerase sigma-70 region 4 CV728_05275 IPR012845 RNA polymerase sigma factor, FliA/WhiG CV728_05275 IPR013325 RNA polymerase sigma factor, region 2 CV728_05275 IPR013324 RNA polymerase sigma factor, region 3/4-like CV728_05275 IPR028617 RNA polymerase sigma factor FliA CV728_05275 IPR007627 RNA polymerase sigma-70 region 2 CV728_05285 IPR025501 ATP binding protein MinD CV728_05285 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05285 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CV728_05290 IPR003593 AAA+ ATPase domain CV728_05290 IPR020006 Flagellar biosynthesis protein FlhF CV728_05290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05290 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CV728_05295 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CV728_05295 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CV728_05300 IPR036005 Creatinase/aminopeptidase-like CV728_05300 IPR000587 Creatinase, N-terminal CV728_05300 IPR000994 Peptidase M24 CV728_05300 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CV728_05300 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CV728_05305 IPR036441 Dehydroquinase, class II superfamily CV728_05305 IPR018509 Dehydroquinase, class II, conserved site CV728_05305 IPR001874 Dehydroquinase, class II CV728_05315 IPR009068 S15/NS1, RNA-binding CV728_05315 IPR005290 Ribosomal protein S15, bacterial-type CV728_05315 IPR000589 Ribosomal protein S15 CV728_05320 IPR042196 FHIPEP, domain 4 CV728_05320 IPR006301 Flagellar biosynthesis protein FlhA CV728_05320 IPR025505 FHIPEP conserved site CV728_05320 IPR042193 FHIPEP, domain 3 CV728_05320 IPR001712 Type III secretion system FHIPEP CV728_05320 IPR042194 FHIPEP, domain 1 CV728_05325 IPR038763 DHH phosphoesterase superfamily CV728_05330 IPR011006 CheY-like superfamily CV728_05330 IPR016032 Signal transduction response regulator, C-terminal effector CV728_05330 IPR001789 Signal transduction response regulator, receiver domain CV728_05330 IPR039420 Transcriptional regulatory protein WalR-like CV728_05330 IPR001867 OmpR/PhoB-type DNA-binding domain CV728_05330 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_05335 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CV728_05335 IPR029052 Metallo-dependent phosphatase-like CV728_05340 IPR020845 AMP-binding, conserved site CV728_05340 IPR000873 AMP-dependent synthetase/ligase CV728_05340 IPR042099 AMP-dependent synthetase-like superfamily CV728_05340 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CV728_05340 IPR025110 AMP-binding enzyme, C-terminal domain CV728_05340 IPR011904 Acetate-CoA ligase CV728_05345 IPR003728 Ribosome maturation factor RimP CV728_05345 IPR028989 Ribosome maturation factor RimP, N-terminal CV728_05345 IPR035956 RimP, N-terminal domain superfamily CV728_05345 IPR028998 Ribosome maturation factor RimP, C-terminal CV728_05350 IPR023799 Ribosome-binding factor A domain superfamily CV728_05350 IPR000238 Ribosome-binding factor A CV728_05350 IPR015946 K homology domain-like, alpha/beta CV728_05350 IPR020053 Ribosome-binding factor A, conserved site CV728_05355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05355 IPR005225 Small GTP-binding protein domain CV728_05355 IPR006847 Translation initiation factor IF-2, N-terminal CV728_05355 IPR000178 Translation initiation factor aIF-2, bacterial-like CV728_05355 IPR015760 Translation initiation factor IF- 2 CV728_05355 IPR023115 Translation initiation factor IF- 2, domain 3 CV728_05355 IPR009000 Translation protein, beta-barrel domain superfamily CV728_05355 IPR000795 Transcription factor, GTP-binding domain CV728_05355 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CV728_05365 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_05365 IPR036554 GHMP kinase, C-terminal domain superfamily CV728_05365 IPR006204 GHMP kinase N-terminal domain CV728_05365 IPR006203 GHMP kinase, ATP-binding, conserved site CV728_05365 IPR000870 Homoserine kinase CV728_05365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_05375 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CV728_05375 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_05375 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CV728_05375 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CV728_05380 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CV728_05380 IPR005526 Septum formation inhibitor MinC, C-terminal CV728_05380 IPR013033 Septum formation inhibitor MinC CV728_05380 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CV728_05405 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CV728_05405 IPR040442 Pyruvate kinase-like domain superfamily CV728_05405 IPR003700 Ketopantoate hydroxymethyltransferase CV728_05410 IPR004605 DNA helicase, Holliday junction RuvB-type CV728_05410 IPR003593 AAA+ ATPase domain CV728_05410 IPR041445 RuvB, AAA lid domain CV728_05410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05410 IPR008823 RuvB C-terminal winged helix domain CV728_05410 IPR008824 RuvB-like P-loop domain CV728_05410 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_05410 IPR036390 Winged helix DNA-binding domain superfamily CV728_05415 IPR018448 Twin-arginine translocation protein TatB CV728_05420 IPR019820 Sec-independent periplasmic protein translocase, conserved site CV728_05420 IPR002033 Sec-independent periplasmic protein translocase TatC CV728_05425 IPR042118 QueA, domain 1 CV728_05425 IPR042119 QueA, domain 2 CV728_05425 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CV728_05425 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CV728_05430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_05430 IPR003682 rRNA small subunit methyltransferase G CV728_05460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_05460 IPR004498 Ribosomal protein L11 methyltransferase CV728_05465 IPR003593 AAA+ ATPase domain CV728_05465 IPR041569 AAA ATPase, AAA+ lid domain CV728_05465 IPR003959 ATPase, AAA-type, core CV728_05465 IPR003960 ATPase, AAA-type, conserved site CV728_05465 IPR005936 Peptidase, FtsH CV728_05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05465 IPR000642 Peptidase M41 CV728_05465 IPR037219 Peptidase M41-like CV728_05475 IPR000462 CDP-alcohol phosphatidyltransferase CV728_05475 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CV728_05480 IPR023299 P-type ATPase, cytoplasmic domain N CV728_05480 IPR018303 P-type ATPase, phosphorylation site CV728_05480 IPR008250 P-type ATPase, A domain superfamily CV728_05480 IPR036412 HAD-like superfamily CV728_05480 IPR027256 P-type ATPase, subfamily IB CV728_05480 IPR001757 P-type ATPase CV728_05480 IPR023214 HAD superfamily CV728_05480 IPR023298 P-type ATPase, transmembrane domain superfamily CV728_05480 IPR006121 Heavy metal-associated domain, HMA CV728_05480 IPR036163 Heavy metal-associated domain superfamily CV728_05480 IPR017969 Heavy-metal-associated, conserved site CV728_05485 IPR036163 Heavy metal-associated domain superfamily CV728_05485 IPR000428 Copper ion binding protein CV728_05485 IPR017969 Heavy-metal-associated, conserved site CV728_05485 IPR006122 Heavy metal-associated domain, copper ion-binding CV728_05485 IPR006121 Heavy metal-associated domain, HMA CV728_05505 IPR004688 Transition metal uptake transporter nickel/cobalt CV728_05505 IPR011541 Nickel/cobalt transporter, high-affinity CV728_05530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05530 IPR011917 ABC transporter, lipid A export, MsbA CV728_05530 IPR003439 ABC transporter-like CV728_05530 IPR036640 ABC transporter type 1, transmembrane domain superfamily CV728_05530 IPR011527 ABC transporter type 1, transmembrane domain CV728_05530 IPR003593 AAA+ ATPase domain CV728_05530 IPR039421 Type I protein exporter CV728_05530 IPR017871 ABC transporter, conserved site CV728_05540 IPR002082 Aspartate carbamoyltransferase CV728_05540 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CV728_05540 IPR006130 Aspartate/ornithine carbamoyltransferase CV728_05540 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CV728_05540 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CV728_05550 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CV728_05550 IPR002942 RNA-binding S4 domain CV728_05550 IPR004538 Haemolysin A /rRNA methyltransferase TlyA CV728_05550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_05550 IPR036986 RNA-binding S4 domain superfamily CV728_05555 IPR002606 Riboflavin kinase, bacterial CV728_05555 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CV728_05555 IPR015864 FAD synthetase CV728_05555 IPR023468 Riboflavin kinase CV728_05555 IPR023465 Riboflavin kinase domain superfamily CV728_05555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_05555 IPR004821 Cytidyltransferase-like domain CV728_05560 IPR029061 Thiamin diphosphate-binding fold CV728_05560 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CV728_05560 IPR005475 Transketolase-like, pyrimidine-binding domain CV728_05560 IPR005478 Transketolase, bacterial-like CV728_05560 IPR020826 Transketolase binding site CV728_05560 IPR005474 Transketolase, N-terminal CV728_05560 IPR033248 Transketolase, C-terminal domain CV728_05560 IPR033247 Transketolase family CV728_05575 IPR036259 MFS transporter superfamily CV728_05575 IPR005829 Sugar transporter, conserved site CV728_05575 IPR005828 Major facilitator, sugar transporter-like CV728_05575 IPR020846 Major facilitator superfamily domain CV728_05575 IPR004736 MFS transporter, metabolite:H symporter CV728_05580 IPR012834 Flagellar basal-body rod FlgG CV728_05580 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CV728_05580 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CV728_05580 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CV728_05580 IPR019776 Flagellar basal body rod protein, conserved site CV728_05580 IPR001444 Flagellar basal body rod protein, N-terminal CV728_05615 IPR005225 Small GTP-binding protein domain CV728_05615 IPR000795 Transcription factor, GTP-binding domain CV728_05615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05615 IPR035654 Elongation factor 4, domain IV CV728_05615 IPR013842 GTP-binding protein LepA, C-terminal CV728_05615 IPR038363 LepA, C-terminal domain superfamily CV728_05615 IPR031157 Tr-type G domain, conserved site CV728_05615 IPR004161 Translation elongation factor EFTu-like, domain 2 CV728_05615 IPR000640 Elongation factor EFG, domain V-like CV728_05615 IPR006297 Elongation factor 4 CV728_05615 IPR035647 EF-G domain III/V-like CV728_05615 IPR009000 Translation protein, beta-barrel domain superfamily CV728_05620 IPR020826 Transketolase binding site CV728_05620 IPR033248 Transketolase, C-terminal domain CV728_05620 IPR005474 Transketolase, N-terminal CV728_05620 IPR005477 Deoxyxylulose-5-phosphate synthase CV728_05620 IPR029061 Thiamin diphosphate-binding fold CV728_05620 IPR005475 Transketolase-like, pyrimidine-binding domain CV728_05620 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CV728_05630 IPR000090 Flagellar motor switch protein FliG CV728_05630 IPR023087 Flagellar motor switch protein FliG, C-terminal CV728_05630 IPR011002 Flagellar motor switch protein FliG, alpha-helical CV728_05630 IPR032779 Flagellar motor switch protein FliG, middle domain CV728_05630 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CV728_05635 IPR013556 Flagellar M-ring C-terminal CV728_05635 IPR000067 Flagellar M-ring protein FliF CV728_05635 IPR006182 Secretory protein YscJ/FliF CV728_05645 IPR029062 Class I glutamine amidotransferase-like CV728_05645 IPR004468 CTP synthase CV728_05645 IPR017456 CTP synthase, N-terminal CV728_05645 IPR017926 Glutamine amidotransferase CV728_05645 IPR033828 CTP synthase GATase domain CV728_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05650 IPR041122 RecJ, OB domain CV728_05650 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal CV728_05650 IPR004610 Bacterial RecJ exonuclease CV728_05650 IPR003156 DHHA1 domain CV728_05650 IPR038763 DHH phosphoesterase superfamily CV728_05650 IPR001667 DDH domain CV728_05655 IPR006145 Pseudouridine synthase, RsuA/RluA CV728_05655 IPR020103 Pseudouridine synthase, catalytic domain superfamily CV728_05655 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CV728_05700 IPR019734 Tetratricopeptide repeat CV728_05700 IPR011990 Tetratricopeptide-like helical domain superfamily CV728_05700 IPR006597 Sel1-like repeat CV728_05700 IPR040239 Beta-lactamase HcpB-like CV728_05705 IPR012337 Ribonuclease H-like superfamily CV728_05705 IPR005227 Putative pre-16S rRNA nuclease CV728_05705 IPR037027 YqgF/RNase H-like domain superfamily CV728_05705 IPR006641 YqgF/RNase H-like domain CV728_05710 IPR003488 DNA recombination-mediator protein A CV728_05710 IPR041614 DprA, winged helix domain CV728_05710 IPR010994 RuvA domain 2-like CV728_05710 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_05715 IPR036707 Cell division topological specificity factor MinE superfamily CV728_05715 IPR005527 Cell division topological specificity factor MinE CV728_05720 IPR025501 ATP binding protein MinD CV728_05720 IPR010223 ATP binding protein MinD, bacterial-type CV728_05720 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CV728_05720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05725 IPR014359 Ketol-acid reductoisomerase, prokaryotic CV728_05725 IPR036291 NAD(P)-binding domain superfamily CV728_05725 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CV728_05725 IPR013023 Ketol-acid reductoisomerase CV728_05725 IPR000506 Ketol-acid reductoisomerase, C-terminal CV728_05725 IPR013116 Ketol-acid reductoisomerase, N-terminal CV728_05735 IPR022926 NH(3)-dependent NAD(+) synthetase CV728_05735 IPR003694 NAD(+) synthetase CV728_05735 IPR022310 NAD/GMP synthase CV728_05735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_05740 IPR003758 Tetraacyldisaccharide 4'-kinase CV728_05745 IPR016181 Acyl-CoA N-acyltransferase CV728_05745 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase CV728_05745 IPR000182 GNAT domain CV728_05755 IPR000527 Flagellar L-ring protein CV728_05775 IPR017665 Guanylate kinase CV728_05775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05775 IPR008144 Guanylate kinase-like domain CV728_05775 IPR020590 Guanylate kinase, conserved site CV728_05775 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CV728_05780 IPR006312 Sec-independent protein translocase protein TatA/E CV728_05780 IPR003369 Sec-independent protein translocase protein TatA/B/E CV728_05790 IPR019595 Domain of unknown function DUF2470 CV728_05790 IPR026324 Haem oxygenase, HugZ CV728_05790 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CV728_05790 IPR012349 FMN-binding split barrel CV728_05790 IPR037119 Haem oxygenase HugZ-like superfamily CV728_05810 IPR016368 Virulence-associated protein D CV728_05810 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CV728_05830 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CV728_05830 IPR037950 Peptidoglycan deacetylase PgdA-like CV728_05830 IPR002509 NodB homology domain CV728_05835 IPR036526 Carbon-nitrogen hydrolase superfamily CV728_05835 IPR003010 Carbon-nitrogen hydrolase CV728_05850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_05850 IPR015424 Pyridoxal phosphate-dependent transferase CV728_05850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_05850 IPR005814 Aminotransferase class-III CV728_05850 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CV728_05865 IPR006074 GTP1/OBG, conserved site CV728_05865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05865 IPR014100 GTP-binding protein Obg/CgtA CV728_05865 IPR006073 GTP binding domain CV728_05865 IPR036726 GTP1/OBG domain superfamily CV728_05865 IPR006169 GTP1/OBG domain CV728_05865 IPR031167 OBG-type guanine nucleotide-binding (G) domain CV728_05865 IPR035101 GTP-binding protein, Obg-type CV728_05870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05870 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CV728_05870 IPR017871 ABC transporter, conserved site CV728_05870 IPR003439 ABC transporter-like CV728_05870 IPR003593 AAA+ ATPase domain CV728_05875 IPR003593 AAA+ ATPase domain CV728_05875 IPR003439 ABC transporter-like CV728_05875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05875 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CV728_05875 IPR017871 ABC transporter, conserved site CV728_05880 IPR035906 MetI-like superfamily CV728_05880 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CV728_05880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_05885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_05885 IPR035906 MetI-like superfamily CV728_05890 IPR000914 Solute-binding protein family 5 domain CV728_05890 IPR030678 Peptide/nickel binding protein, MppA-type CV728_05890 IPR039424 Solute-binding protein family 5 CV728_05890 IPR023765 Solute-binding protein family 5, conserved site CV728_05895 IPR018261 Ribosomal protein L27, conserved site CV728_05895 IPR001684 Ribosomal protein L27 CV728_05900 IPR018258 Ribosomal protein L21, conserved site CV728_05900 IPR028909 Ribosomal protein L21-like CV728_05900 IPR001787 Ribosomal protein L21 CV728_05900 IPR036164 L21-like superfamily CV728_05910 IPR003010 Carbon-nitrogen hydrolase CV728_05910 IPR036526 Carbon-nitrogen hydrolase superfamily CV728_05910 IPR023719 Aliphatic amidase CV728_05915 IPR019999 Anthranilate synthase component I-like CV728_05915 IPR006805 Anthranilate synthase component I, N-terminal CV728_05915 IPR015890 Chorismate-utilising enzyme, C-terminal CV728_05915 IPR005802 Aminodeoxychorismate synthase, component I CV728_05915 IPR005801 ADC synthase CV728_05930 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CV728_05930 IPR002986 Diaminopimelate decarboxylase, LysA CV728_05930 IPR029066 PLP-binding barrel CV728_05930 IPR000183 Ornithine/DAP/Arg decarboxylase CV728_05930 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CV728_05930 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CV728_05930 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CV728_05950 IPR037219 Peptidase M41-like CV728_05950 IPR003593 AAA+ ATPase domain CV728_05950 IPR041569 AAA ATPase, AAA+ lid domain CV728_05950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_05950 IPR003959 ATPase, AAA-type, core CV728_05950 IPR005936 Peptidase, FtsH CV728_05950 IPR000642 Peptidase M41 CV728_05950 IPR003960 ATPase, AAA-type, conserved site CV728_05955 IPR023404 Radical SAM, alpha/beta horseshoe CV728_05955 IPR007197 Radical SAM CV728_05955 IPR006467 MiaB-like tRNA modifying enzyme CV728_05955 IPR038135 Methylthiotransferase, N-terminal domain superfamily CV728_05955 IPR013848 Methylthiotransferase, N-terminal CV728_05955 IPR020612 Methylthiotransferase, conserved site CV728_05955 IPR005839 Methylthiotransferase CV728_05955 IPR006638 Elp3/MiaB/NifB CV728_05965 IPR016037 3-dehydroquinate synthase AroB CV728_05965 IPR030963 3-dehydroquinate synthase family CV728_05965 IPR030960 3-dehydroquinate synthase domain CV728_05975 IPR002616 tRNA-guanine(15) transglycosylase-like CV728_05975 IPR036511 Queuine tRNA-ribosyltransferase-like CV728_05975 IPR004803 tRNA-guanine transglycosylase CV728_05985 IPR002201 Glycosyl transferase, family 9 CV728_05985 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CV728_05990 IPR003695 Ppx/GppA phosphatase CV728_06000 IPR013785 Aldolase-type TIM barrel CV728_06000 IPR013798 Indole-3-glycerol phosphate synthase CV728_06000 IPR011060 Ribulose-phosphate binding barrel CV728_06000 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CV728_06010 IPR005358 Putative zinc- or iron-chelating domain containing protein CV728_06035 IPR005839 Methylthiotransferase CV728_06035 IPR038135 Methylthiotransferase, N-terminal domain superfamily CV728_06035 IPR020612 Methylthiotransferase, conserved site CV728_06035 IPR013848 Methylthiotransferase, N-terminal CV728_06035 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CV728_06035 IPR007197 Radical SAM CV728_06035 IPR023404 Radical SAM, alpha/beta horseshoe CV728_06035 IPR002792 TRAM domain CV728_06035 IPR006638 Elp3/MiaB/NifB CV728_06045 IPR006680 Amidohydrolase-related CV728_06045 IPR011059 Metal-dependent hydrolase, composite domain superfamily CV728_06045 IPR032466 Metal-dependent hydrolase CV728_06050 IPR006680 Amidohydrolase-related CV728_06050 IPR011059 Metal-dependent hydrolase, composite domain superfamily CV728_06050 IPR032466 Metal-dependent hydrolase CV728_06055 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CV728_06060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06060 IPR019489 Clp ATPase, C-terminal CV728_06060 IPR003593 AAA+ ATPase domain CV728_06060 IPR028299 ClpA/B, conserved site 2 CV728_06060 IPR018368 ClpA/B, conserved site 1 CV728_06060 IPR001270 ClpA/B family CV728_06060 IPR003959 ATPase, AAA-type, core CV728_06060 IPR004176 Clp, N-terminal CV728_06060 IPR041546 ClpA/ClpB, AAA lid domain CV728_06060 IPR036628 Clp, N-terminal domain superfamily CV728_06065 IPR002941 DNA methylase N-4/N-6 CV728_06065 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_06065 IPR001091 Restriction/modification DNA-methylase CV728_06065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_06070 IPR041551 BsaWI restriction endonuclease type 2 CV728_06075 IPR041551 BsaWI restriction endonuclease type 2 CV728_06085 IPR041405 Type III R-M EcoP15I, C-terminal CV728_06085 IPR002941 DNA methylase N-4/N-6 CV728_06085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_06085 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_06085 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CV728_06090 IPR003753 Exonuclease VII, large subunit CV728_06090 IPR020579 Exonuclease VII, large subunit, C-terminal CV728_06090 IPR025824 OB-fold nucleic acid binding domain CV728_06095 IPR008915 Peptidase M50 CV728_06095 IPR036034 PDZ superfamily CV728_06095 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CV728_06110 IPR042110 Adenylosuccinate synthetase, domain 2 CV728_06110 IPR042109 Adenylosuccinate synthetase, domain 1 CV728_06110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06110 IPR033128 Adenylosuccinate synthase, active site CV728_06110 IPR018220 Adenylosuccinate synthase, GTP-binding site CV728_06110 IPR042111 Adenylosuccinate synthetase, domain 3 CV728_06110 IPR001114 Adenylosuccinate synthetase CV728_06135 IPR003439 ABC transporter-like CV728_06135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06135 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CV728_06135 IPR017871 ABC transporter, conserved site CV728_06135 IPR003593 AAA+ ATPase domain CV728_06150 IPR001650 Helicase, C-terminal CV728_06150 IPR014014 RNA helicase, DEAD-box type, Q motif CV728_06150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06150 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_06150 IPR011545 DEAD/DEAH box helicase domain CV728_06155 IPR001782 Flagellar P-ring protein CV728_06160 IPR016511 Uncharacterised conserved protein UCP007248 CV728_06165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CV728_06165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CV728_06165 IPR000014 PAS domain CV728_06165 IPR003594 Histidine kinase/HSP90-like ATPase CV728_06165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CV728_06165 IPR005467 Histidine kinase domain CV728_06165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CV728_06170 IPR008331 Ferritin/DPS protein domain CV728_06170 IPR023188 DNA-binding protein Dps, conserved site CV728_06170 IPR009078 Ferritin-like superfamily CV728_06170 IPR012347 Ferritin-like CV728_06170 IPR002177 DNA-binding protein Dps CV728_06185 IPR033749 Polyprenyl synthetase, conserved site CV728_06185 IPR000092 Polyprenyl synthetase CV728_06185 IPR008949 Isoprenoid synthase domain superfamily CV728_06190 IPR018214 Glutamyl-tRNA reductase, conserved site CV728_06190 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CV728_06190 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CV728_06190 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CV728_06190 IPR036291 NAD(P)-binding domain superfamily CV728_06190 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CV728_06190 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CV728_06190 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CV728_06195 IPR004154 Anticodon-binding CV728_06195 IPR002316 Proline-tRNA ligase, class IIa CV728_06195 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CV728_06195 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CV728_06195 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CV728_06195 IPR033730 Prokaryote proline-tRNA ligase core domain CV728_06195 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CV728_06195 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CV728_06195 IPR036621 Anticodon-binding domain superfamily CV728_06195 IPR006195 Aminoacyl-tRNA synthetase, class II CV728_06200 IPR000860 Porphobilinogen deaminase CV728_06200 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CV728_06200 IPR022417 Porphobilinogen deaminase, N-terminal CV728_06200 IPR022418 Porphobilinogen deaminase, C-terminal CV728_06200 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CV728_06210 IPR040239 Beta-lactamase HcpB-like CV728_06210 IPR019734 Tetratricopeptide repeat CV728_06210 IPR006597 Sel1-like repeat CV728_06210 IPR011990 Tetratricopeptide-like helical domain superfamily CV728_06220 IPR016185 Pre-ATP-grasp domain superfamily CV728_06220 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CV728_06225 IPR020913 Uncharacterised protein family UPF0323 CV728_06235 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CV728_06235 IPR029044 Nucleotide-diphospho-sugar transferases CV728_06235 IPR003329 Acylneuraminate cytidylyltransferase CV728_06250 IPR018045 Sulphate anion transporter, conserved site CV728_06250 IPR001902 SLC26A/SulP transporter CV728_06250 IPR002645 STAS domain CV728_06250 IPR036513 STAS domain superfamily CV728_06250 IPR011547 SLC26A/SulP transporter domain CV728_06265 IPR002781 Transmembrane protein TauE-like CV728_06270 IPR011057 Mss4-like superfamily CV728_06270 IPR002579 Peptide methionine sulphoxide reductase MrsB CV728_06270 IPR002569 Peptide methionine sulphoxide reductase MsrA CV728_06270 IPR028427 Peptide methionine sulfoxide reductase CV728_06270 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CV728_06275 IPR003593 AAA+ ATPase domain CV728_06275 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_06275 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_06275 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CV728_06275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06275 IPR041166 LapB, rubredoxin metal binding domain CV728_06275 IPR004504 DNA repair protein RadA CV728_06285 IPR034904 Fe-S cluster assembly domain superfamily CV728_06285 IPR007419 BFD-like [2Fe-2S]-binding domain CV728_06285 IPR016217 Nitrogen fixation, NifU CV728_06285 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CV728_06285 IPR010238 NIF system FeS cluster assembly, NifU CV728_06285 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CV728_06285 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CV728_06290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_06290 IPR000192 Aminotransferase class V domain CV728_06290 IPR016454 Cysteine desulfurase CV728_06290 IPR015424 Pyridoxal phosphate-dependent transferase CV728_06290 IPR010240 Cysteine desulfurase IscS CV728_06290 IPR017773 Cysteine desulfurase NifS, proteobacteria CV728_06290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_06305 IPR005247 YbhB/YbcL CV728_06305 IPR036610 PEBP-like superfamily CV728_06305 IPR008914 Phosphatidylethanolamine-binding protein CV728_06320 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CV728_06320 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CV728_06320 IPR036291 NAD(P)-binding domain superfamily CV728_06320 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CV728_06320 IPR026877 DXP reductoisomerase C-terminal domain CV728_06320 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CV728_06325 IPR000374 Phosphatidate cytidylyltransferase CV728_06330 IPR001898 Solute carrier family 13 CV728_06335 IPR026904 GidA associated domain 3 CV728_06335 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CV728_06335 IPR020595 MnmG-related, conserved site CV728_06335 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CV728_06335 IPR036188 FAD/NAD(P)-binding domain superfamily CV728_06340 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CV728_06340 IPR011650 Peptidase M20, dimerisation domain CV728_06340 IPR002933 Peptidase M20 CV728_06340 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CV728_06340 IPR036264 Bacterial exopeptidase dimerisation domain CV728_06345 IPR019734 Tetratricopeptide repeat CV728_06345 IPR006597 Sel1-like repeat CV728_06345 IPR040239 Beta-lactamase HcpB-like CV728_06345 IPR011990 Tetratricopeptide-like helical domain superfamily CV728_06360 IPR013762 Integrase-like, catalytic domain superfamily CV728_06360 IPR023009 Tyrosine recombinase XerC/XerD CV728_06360 IPR011010 DNA breaking-rejoining enzyme, catalytic core CV728_06360 IPR004107 Integrase, SAM-like, N-terminal CV728_06360 IPR011931 Tyrosine recombinase XerC CV728_06360 IPR002104 Integrase, catalytic domain CV728_06360 IPR010998 Integrase/recombinase, N-terminal CV728_06365 IPR040198 Fido domain-containing protein CV728_06365 IPR041657 Helix-turn-helix domain, group 17 CV728_06365 IPR036597 Fido-like domain superfamily CV728_06365 IPR010093 SinI-like, DNA-binding domain CV728_06365 IPR003812 Fido domain CV728_06415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06415 IPR025669 AAA domain CV728_06425 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CV728_06425 IPR034149 DNA topoisomerase 1, TOPRIM domain CV728_06425 IPR006171 TOPRIM domain CV728_06425 IPR025589 Topoisomerase C-terminal repeat CV728_06425 IPR028612 DNA topoisomerase I, type IA CV728_06425 IPR005733 DNA topoisomerase I, bacterial-type CV728_06425 IPR000380 DNA topoisomerase, type IA CV728_06425 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CV728_06425 IPR023406 DNA topoisomerase, type IA, active site CV728_06425 IPR013497 DNA topoisomerase, type IA, central CV728_06425 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CV728_06425 IPR023405 DNA topoisomerase, type IA, core domain CV728_06425 IPR003601 DNA topoisomerase, type IA, domain 2 CV728_06425 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CV728_06450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06450 IPR014149 Conjugative transfer, TrbB CV728_06450 IPR001482 Type II/IV secretion system protein CV728_06470 IPR042217 Type IV secretion system, VirB10/TrbI CV728_06470 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CV728_06490 IPR003593 AAA+ ATPase domain CV728_06490 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CV728_06490 IPR004346 CagE, TrbE, VirB component of type IV transporter system CV728_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06540 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CV728_06540 IPR019591 Mrp/NBP35 ATP-binding protein CV728_06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06540 IPR000808 Mrp, conserved site CV728_06540 IPR002744 MIP18 family-like CV728_06540 IPR034904 Fe-S cluster assembly domain superfamily CV728_06560 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CV728_06560 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CV728_06560 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CV728_06560 IPR016039 Thiolase-like CV728_06565 IPR003664 Fatty acid synthesis PlsX protein CV728_06565 IPR012281 Phospholipid biosynthesis protein, PlsX-like CV728_06570 IPR011332 Zinc-binding ribosomal protein CV728_06570 IPR002677 Ribosomal protein L32p CV728_06580 IPR023005 Nucleoside diphosphate kinase, active site CV728_06580 IPR001564 Nucleoside diphosphate kinase CV728_06580 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CV728_06580 IPR034907 Nucleoside diphosphate kinase-like domain CV728_06585 IPR022629 S-adenosylmethionine synthetase, central domain CV728_06585 IPR022631 S-adenosylmethionine synthetase, conserved site CV728_06585 IPR022630 S-adenosylmethionine synthetase, C-terminal CV728_06585 IPR022628 S-adenosylmethionine synthetase, N-terminal CV728_06585 IPR022636 S-adenosylmethionine synthetase superfamily CV728_06585 IPR002133 S-adenosylmethionine synthetase CV728_06595 IPR010998 Integrase/recombinase, N-terminal CV728_06595 IPR002104 Integrase, catalytic domain CV728_06595 IPR013762 Integrase-like, catalytic domain superfamily CV728_06595 IPR011010 DNA breaking-rejoining enzyme, catalytic core CV728_06595 IPR004107 Integrase, SAM-like, N-terminal CV728_06610 IPR001959 Probable transposase, IS891/IS1136/IS1341 CV728_06610 IPR010095 Transposase IS605, OrfB, C-terminal CV728_06610 IPR021027 Transposase, putative, helix-turn-helix domain CV728_06615 IPR002686 Transposase IS200-like CV728_06615 IPR036515 Transposase IS200-like superfamily CV728_06635 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CV728_06635 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CV728_06635 IPR001451 Hexapeptide repeat CV728_06635 IPR011004 Trimeric LpxA-like superfamily CV728_06640 IPR002347 Short-chain dehydrogenase/reductase SDR CV728_06640 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CV728_06640 IPR036291 NAD(P)-binding domain superfamily CV728_06645 IPR020861 Triosephosphate isomerase, active site CV728_06645 IPR000652 Triosephosphate isomerase CV728_06645 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CV728_06645 IPR035990 Triosephosphate isomerase superfamily CV728_06645 IPR013785 Aldolase-type TIM barrel CV728_06650 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CV728_06650 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CV728_06650 IPR004224 Fumarate reductase type B, transmembrane subunit CV728_06655 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CV728_06655 IPR036188 FAD/NAD(P)-binding domain superfamily CV728_06655 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CV728_06655 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CV728_06655 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CV728_06655 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CV728_06660 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CV728_06660 IPR009051 Alpha-helical ferredoxin CV728_06660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CV728_06660 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CV728_06660 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CV728_06660 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CV728_06660 IPR012675 Beta-grasp domain superfamily CV728_06660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CV728_06660 IPR036010 2Fe-2S ferredoxin-like superfamily CV728_06665 IPR025202 Phospholipase D-like domain CV728_06665 IPR001736 Phospholipase D/Transphosphatidylase CV728_06670 IPR020761 Uncharacterised protein family UPF0114, bacteria CV728_06670 IPR005134 Uncharacterised protein family UPF0114 CV728_06690 IPR001085 Serine hydroxymethyltransferase CV728_06690 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CV728_06690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_06690 IPR015424 Pyridoxal phosphate-dependent transferase CV728_06690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_06690 IPR039429 Serine hydroxymethyltransferase-like domain CV728_06695 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CV728_06695 IPR012340 Nucleic acid-binding, OB-fold CV728_06695 IPR006195 Aminoacyl-tRNA synthetase, class II CV728_06695 IPR002313 Lysine-tRNA ligase, class II CV728_06695 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CV728_06695 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CV728_06705 IPR036526 Carbon-nitrogen hydrolase superfamily CV728_06705 IPR004563 Apolipoprotein N-acyltransferase CV728_06705 IPR003010 Carbon-nitrogen hydrolase CV728_06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06710 IPR011924 Lipoprotein releasing system, ATP-binding protein CV728_06710 IPR015854 ABC transporter, lipoprotein release, LolD CV728_06710 IPR017871 ABC transporter, conserved site CV728_06710 IPR003439 ABC transporter-like CV728_06710 IPR003593 AAA+ ATPase domain CV728_06715 IPR013974 SAF domain CV728_06715 IPR020030 Pseudaminic acid biosynthesis, PseI CV728_06715 IPR013132 N-acetylneuraminic acid synthase, N-terminal CV728_06715 IPR013785 Aldolase-type TIM barrel CV728_06715 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily CV728_06715 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CV728_06720 IPR013852 Translation elongation factor P/YeiP, conserved site CV728_06720 IPR001059 Translation elongation factor P/YeiP, central CV728_06720 IPR008991 Translation protein SH3-like domain superfamily CV728_06720 IPR013185 Translation elongation factor, KOW-like CV728_06720 IPR015365 Elongation factor P, C-terminal CV728_06720 IPR014722 Ribosomal protein L2, domain 2 CV728_06720 IPR011768 Translation elongation factor P CV728_06720 IPR020599 Translation elongation factor P/YeiP CV728_06720 IPR012340 Nucleic acid-binding, OB-fold CV728_06725 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 CV728_06725 IPR013785 Aldolase-type TIM barrel CV728_06725 IPR000771 Fructose-bisphosphate aldolase, class-II CV728_06730 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CV728_06730 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CV728_06750 IPR038987 Molybdopterin biosynthesis protein MoeA-like CV728_06750 IPR005111 MoeA, C-terminal, domain IV CV728_06750 IPR036688 MoeA, C-terminal, domain IV superfamily CV728_06750 IPR005110 MoeA, N-terminal and linker domain CV728_06750 IPR036135 MoeA, N-terminal and linker domain superfamily CV728_06750 IPR001453 MoaB/Mog domain CV728_06750 IPR036425 MoaB/Mog-like domain superfamily CV728_06750 IPR008284 Molybdenum cofactor biosynthesis, conserved site CV728_06755 IPR005139 Peptide chain release factor CV728_06755 IPR000352 Peptide chain release factor class I CV728_06755 IPR004374 Peptide chain release factor 2 CV728_06780 IPR039420 Transcriptional regulatory protein WalR-like CV728_06780 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_06780 IPR016032 Signal transduction response regulator, C-terminal effector CV728_06780 IPR001789 Signal transduction response regulator, receiver domain CV728_06780 IPR001867 OmpR/PhoB-type DNA-binding domain CV728_06780 IPR011006 CheY-like superfamily CV728_06785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CV728_06785 IPR003594 Histidine kinase/HSP90-like ATPase CV728_06785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CV728_06785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CV728_06785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CV728_06785 IPR005467 Histidine kinase domain CV728_06785 IPR003660 HAMP domain CV728_06790 IPR001731 Delta-aminolevulinic acid dehydratase CV728_06790 IPR030656 Delta-aminolevulinic acid dehydratase, active site CV728_06790 IPR013785 Aldolase-type TIM barrel CV728_06795 IPR029072 YebC-like CV728_06795 IPR026564 Transcriptional regulator TACO1-like, domain 3 CV728_06795 IPR002876 Transcriptional regulator TACO1-like CV728_06795 IPR017856 Integrase-like, N-terminal CV728_06805 IPR040239 Beta-lactamase HcpB-like CV728_06805 IPR006597 Sel1-like repeat CV728_06805 IPR011990 Tetratricopeptide-like helical domain superfamily CV728_06820 IPR023000 Shikimate kinase, conserved site CV728_06820 IPR000623 Shikimate kinase/Threonine synthase-like 1 CV728_06820 IPR031322 Shikimate kinase/gluconokinase CV728_06820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06835 IPR036849 Enolase-like, C-terminal domain superfamily CV728_06835 IPR029017 Enolase-like, N-terminal CV728_06835 IPR020810 Enolase, C-terminal TIM barrel domain CV728_06835 IPR020809 Enolase, conserved site CV728_06835 IPR020811 Enolase, N-terminal CV728_06835 IPR000941 Enolase CV728_06840 IPR023400 DNA recombination and repair protein RecA, C-terminal CV728_06840 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CV728_06840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_06840 IPR020584 DNA recombination/repair protein RecA, conserved site CV728_06840 IPR013765 DNA recombination and repair protein RecA CV728_06840 IPR003593 AAA+ ATPase domain CV728_06840 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CV728_06870 IPR009056 Cytochrome c-like domain CV728_06870 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily CV728_06870 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CV728_06870 IPR036909 Cytochrome c-like domain superfamily CV728_06870 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CV728_06885 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CV728_06885 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CV728_06885 IPR000883 Cytochrome c oxidase subunit I CV728_06885 IPR023616 Cytochrome c oxidase-like, subunit I domain CV728_06885 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CV728_06895 IPR015797 NUDIX hydrolase-like domain superfamily CV728_06895 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CV728_06895 IPR029119 MutY, C-terminal CV728_06895 IPR004036 Endonuclease III-like, conserved site-2 CV728_06895 IPR000445 Helix-hairpin-helix motif CV728_06895 IPR003265 HhH-GPD domain CV728_06895 IPR004035 Endonuclease III, iron-sulphur binding site CV728_06895 IPR005760 A/G-specific adenine glycosylase MutY CV728_06895 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CV728_06895 IPR011257 DNA glycosylase CV728_06905 IPR003804 L-lactate permease CV728_06910 IPR003804 L-lactate permease CV728_06915 IPR022822 Lactate utilization protein A CV728_06915 IPR004017 Cysteine-rich domain CV728_06920 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CV728_06920 IPR024569 4Fe-4S binding protein, C-terminal CV728_06920 IPR004452 4Fe-4S binding protein CV728_06920 IPR037171 NagB/RpiA transferase-like CV728_06920 IPR003741 LUD domain CV728_06920 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CV728_06920 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CV728_06920 IPR009051 Alpha-helical ferredoxin CV728_06925 IPR003741 LUD domain CV728_06925 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CV728_06925 IPR037171 NagB/RpiA transferase-like CV728_06930 IPR036249 Thioredoxin-like superfamily CV728_06930 IPR013766 Thioredoxin domain CV728_06930 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CV728_06930 IPR024706 Peroxiredoxin, AhpC-type CV728_06940 IPR002480 DAHP synthetase, class II CV728_06940 IPR013785 Aldolase-type TIM barrel CV728_06945 IPR004694 Hydroxy amino acid transporter CV728_06945 IPR018227 Amino acid/polyamine transporter 2 CV728_06950 IPR005131 Serine dehydratase beta chain CV728_06950 IPR005130 Serine dehydratase-like, alpha subunit CV728_06950 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CV728_06950 IPR029009 Allosteric substrate binding domain superfamily CV728_06975 IPR005813 Ribosomal protein L20 CV728_06975 IPR035566 Ribosomal protein L20, C-terminal CV728_06980 IPR021137 Ribosomal protein L35 CV728_06980 IPR037229 Ribosomal protein L35 superfamily CV728_06980 IPR001706 Ribosomal protein L35, non-mitochondrial CV728_06980 IPR018265 Ribosomal protein L35, conserved site CV728_06985 IPR019815 Translation initiation factor 3, C-terminal CV728_06985 IPR019814 Translation initiation factor 3, N-terminal CV728_06985 IPR001288 Translation initiation factor 3 CV728_06985 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CV728_06985 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CV728_06985 IPR019813 Translation initiation factor 3, conserved site CV728_06990 IPR006195 Aminoacyl-tRNA synthetase, class II CV728_06990 IPR004154 Anticodon-binding CV728_06990 IPR036621 Anticodon-binding domain superfamily CV728_06990 IPR002320 Threonine-tRNA ligase, class IIa CV728_06990 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CV728_06990 IPR033728 Threonine-tRNA ligase catalytic core domain CV728_06990 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CV728_06990 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CV728_07000 IPR036637 Phosphohistidine domain superfamily CV728_07000 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CV728_07000 IPR023151 PEP-utilising enzyme, conserved site CV728_07000 IPR008279 PEP-utilising enzyme, mobile domain CV728_07000 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CV728_07000 IPR040442 Pyruvate kinase-like domain superfamily CV728_07000 IPR000121 PEP-utilising enzyme, C-terminal CV728_07000 IPR006319 Phosphoenolpyruvate synthase CV728_07000 IPR013815 ATP-grasp fold, subdomain 1 CV728_07000 IPR018274 PEP-utilising enzyme, active site CV728_07015 IPR013785 Aldolase-type TIM barrel CV728_07015 IPR040084 GTPase Obg CV728_07015 IPR007197 Radical SAM CV728_07020 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CV728_07020 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CV728_07020 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CV728_07020 IPR013497 DNA topoisomerase, type IA, central CV728_07020 IPR005733 DNA topoisomerase I, bacterial-type CV728_07020 IPR034149 DNA topoisomerase 1, TOPRIM domain CV728_07020 IPR023406 DNA topoisomerase, type IA, active site CV728_07020 IPR003601 DNA topoisomerase, type IA, domain 2 CV728_07020 IPR006171 TOPRIM domain CV728_07020 IPR000380 DNA topoisomerase, type IA CV728_07020 IPR013498 DNA topoisomerase, type IA, zn finger CV728_07020 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CV728_07020 IPR023405 DNA topoisomerase, type IA, core domain CV728_07020 IPR028612 DNA topoisomerase I, type IA CV728_07025 IPR001029 Flagellin, D0/D1 domain CV728_07025 IPR010810 Flagellin hook, IN motif CV728_07025 IPR001492 Flagellin CV728_07045 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_07045 IPR002571 Heat-inducible transcription repressor HrcA CV728_07045 IPR036390 Winged helix DNA-binding domain superfamily CV728_07050 IPR013805 GrpE nucleotide exchange factor, coiled-coil CV728_07050 IPR000740 GrpE nucleotide exchange factor CV728_07050 IPR009012 GrpE nucleotide exchange factor, head CV728_07055 IPR013126 Heat shock protein 70 family CV728_07055 IPR018181 Heat shock protein 70, conserved site CV728_07055 IPR012725 Chaperone DnaK CV728_07055 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CV728_07055 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CV728_07065 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CV728_07065 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CV728_07065 IPR001926 Pyridoxal-phosphate dependent enzyme CV728_07070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CV728_07070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CV728_07070 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CV728_07070 IPR015424 Pyridoxal phosphate-dependent transferase CV728_07075 IPR003815 S-ribosylhomocysteinase (LuxS) CV728_07075 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CV728_07075 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CV728_07080 IPR008334 5'-Nucleotidase, C-terminal CV728_07080 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CV728_07080 IPR006146 5'-Nucleotidase, conserved site CV728_07080 IPR029052 Metallo-dependent phosphatase-like CV728_07080 IPR019931 LPXTG cell wall anchor domain CV728_07080 IPR006179 5'-Nucleotidase/apyrase CV728_07080 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CV728_07080 IPR041827 CpdB, N-terminal metallophosphatase domain CV728_07085 IPR003660 HAMP domain CV728_07085 IPR004090 Chemotaxis methyl-accepting receptor CV728_07085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CV728_07085 IPR000727 Target SNARE coiled-coil homology domain CV728_07085 IPR033480 Single Cache domain 2 CV728_07090 IPR001173 Glycosyltransferase 2-like CV728_07090 IPR029044 Nucleotide-diphospho-sugar transferases CV728_07100 IPR003828 Epoxyqueuosine reductase QueH CV728_07105 IPR032255 Helical bimodular sensor domain CV728_07105 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CV728_07105 IPR004090 Chemotaxis methyl-accepting receptor CV728_07105 IPR003660 HAMP domain CV728_07110 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CV728_07110 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CV728_07110 IPR001926 Pyridoxal-phosphate dependent enzyme CV728_07110 IPR037158 Threonine synthase, N-terminal domain superfamily CV728_07110 IPR004450 Threonine synthase-like CV728_07120 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CV728_07120 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CV728_07120 IPR036291 NAD(P)-binding domain superfamily CV728_07120 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CV728_07135 IPR002516 Glycosyl transferase, family 11 CV728_07140 IPR001091 Restriction/modification DNA-methylase CV728_07140 IPR002941 DNA methylase N-4/N-6 CV728_07140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07140 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07155 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CV728_07155 IPR024925 Malonyl CoA-acyl carrier protein transacylase CV728_07155 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CV728_07155 IPR014043 Acyl transferase CV728_07155 IPR001227 Acyl transferase domain superfamily CV728_07155 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CV728_07160 IPR035994 Nucleoside phosphorylase superfamily CV728_07160 IPR000845 Nucleoside phosphorylase domain CV728_07160 IPR010049 MTA/SAH nucleosidase CV728_07165 IPR007627 RNA polymerase sigma-70 region 2 CV728_07165 IPR014284 RNA polymerase sigma-70 like domain CV728_07165 IPR000943 RNA polymerase sigma-70 CV728_07165 IPR028630 RNA polymerase sigma factor RpoD CV728_07165 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CV728_07165 IPR013324 RNA polymerase sigma factor, region 3/4-like CV728_07165 IPR009042 RNA polymerase sigma-70 region 1.2 CV728_07165 IPR013325 RNA polymerase sigma factor, region 2 CV728_07165 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_07165 IPR007630 RNA polymerase sigma-70 region 4 CV728_07165 IPR007624 RNA polymerase sigma-70 region 3 CV728_07175 IPR036188 FAD/NAD(P)-binding domain superfamily CV728_07175 IPR006231 Malate:quinone-oxidoreductase CV728_07180 IPR035366 Protein of unknown function DUF5408 CV728_07185 IPR005823 Ribosomal protein L13, bacterial-type CV728_07185 IPR005822 Ribosomal protein L13 CV728_07185 IPR023563 Ribosomal protein L13, conserved site CV728_07185 IPR036899 Ribosomal protein L13 superfamily CV728_07190 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_07190 IPR020574 Ribosomal protein S9, conserved site CV728_07190 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_07190 IPR000754 Ribosomal protein S9 CV728_07190 IPR023035 Ribosomal protein S9, bacterial/plastid CV728_07195 IPR004090 Chemotaxis methyl-accepting receptor CV728_07195 IPR033480 Single Cache domain 2 CV728_07195 IPR003660 HAMP domain CV728_07195 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CV728_07220 IPR000352 Peptide chain release factor class I CV728_07220 IPR004373 Peptide chain release factor 1 CV728_07220 IPR005139 Peptide chain release factor CV728_07225 IPR036510 Ribosomal protein S20 superfamily CV728_07225 IPR002583 Ribosomal protein S20 CV728_07230 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CV728_07230 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CV728_07230 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CV728_07230 IPR005843 Alpha-D-phosphohexomutase, C-terminal CV728_07230 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CV728_07230 IPR016066 Alpha-D-phosphohexomutase, conserved site CV728_07230 IPR005841 Alpha-D-phosphohexomutase superfamily CV728_07230 IPR006352 Phosphoglucosamine mutase, bacterial type CV728_07230 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CV728_07235 IPR001872 Peptidase A8, signal peptidase II CV728_07245 IPR002026 Urease, gamma/gamma-beta subunit CV728_07245 IPR008223 Urease, gamma-beta subunit CV728_07245 IPR036463 Urease, gamma subunit superfamily CV728_07245 IPR036461 Urease, beta subunit superfamily CV728_07245 IPR002019 Urease, beta subunit CV728_07250 IPR032466 Metal-dependent hydrolase CV728_07250 IPR029754 Urease nickel binding site CV728_07250 IPR006680 Amidohydrolase-related CV728_07250 IPR011059 Metal-dependent hydrolase, composite domain superfamily CV728_07250 IPR017951 Urease alpha subunit, C-terminal CV728_07250 IPR005848 Urease, alpha subunit CV728_07250 IPR017950 Urease active site CV728_07250 IPR011612 Urease alpha-subunit, N-terminal domain CV728_07255 IPR038523 AmiS/UreI transporter superfamily CV728_07255 IPR003211 AmiS/UreI transporter CV728_07260 IPR036675 UreE, C-terminal domain superfamily CV728_07260 IPR007864 Urease accessory protein UreE, C-terminal domain CV728_07260 IPR012406 Urease accessory protein UreE CV728_07260 IPR036118 UreE urease accessory, N-terminal domain superfamily CV728_07260 IPR004029 UreE urease accessory, N-terminal CV728_07265 IPR038277 UreF domain superfamily CV728_07265 IPR002639 Urease accessory protein UreF CV728_07270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07270 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CV728_07270 IPR004400 Urease accessory protein UreG CV728_07275 IPR002669 Urease accessory protein UreD CV728_07320 IPR016032 Signal transduction response regulator, C-terminal effector CV728_07320 IPR001789 Signal transduction response regulator, receiver domain CV728_07320 IPR011006 CheY-like superfamily CV728_07320 IPR001867 OmpR/PhoB-type DNA-binding domain CV728_07320 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_07320 IPR039420 Transcriptional regulatory protein WalR-like CV728_07330 IPR036652 YjeF N-terminal domain superfamily CV728_07330 IPR004443 YjeF N-terminal domain CV728_07330 IPR017953 Carbohydrate kinase, predicted, conserved site CV728_07330 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CV728_07330 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CV728_07330 IPR029056 Ribokinase-like CV728_07335 IPR007693 DNA helicase, DnaB-like, N-terminal CV728_07335 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CV728_07335 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CV728_07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07335 IPR007692 DNA helicase, DnaB type CV728_07335 IPR007694 DNA helicase, DnaB-like, C-terminal CV728_07345 IPR030470 UbiA prenyltransferase conserved site CV728_07345 IPR000537 UbiA prenyltransferase family CV728_07345 IPR006369 Protohaem IX farnesyltransferase CV728_07360 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CV728_07360 IPR033177 Phosphatidylserine decarboxylase CV728_07360 IPR003817 Phosphatidylserine decarboxylase-related CV728_07365 IPR036094 Quinolinate synthetase A superfamily CV728_07365 IPR023515 Quinolinate synthase A, type 3 CV728_07365 IPR003473 Quinolinate synthetase A CV728_07370 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CV728_07370 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CV728_07370 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CV728_07370 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CV728_07370 IPR004393 Nicotinate-nucleotide pyrophosphorylase CV728_07370 IPR013785 Aldolase-type TIM barrel CV728_07370 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CV728_07380 IPR017754 Agmatine deiminase CV728_07380 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CV728_07385 IPR002941 DNA methylase N-4/N-6 CV728_07385 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07385 IPR001091 Restriction/modification DNA-methylase CV728_07385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07390 IPR001387 Cro/C1-type helix-turn-helix domain CV728_07390 IPR001525 C-5 cytosine methyltransferase CV728_07390 IPR018117 DNA methylase, C-5 cytosine-specific, active site CV728_07390 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CV728_07390 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CV728_07405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07405 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07405 IPR002941 DNA methylase N-4/N-6 CV728_07405 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CV728_07420 IPR001734 Sodium/solute symporter CV728_07420 IPR011851 Sodium/proline symporter CV728_07420 IPR038377 Sodium/glucose symporter superfamily CV728_07420 IPR018212 Sodium/solute symporter, conserved site CV728_07425 IPR013321 Arc-type ribbon-helix-helix CV728_07425 IPR016162 Aldehyde dehydrogenase, N-terminal CV728_07425 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CV728_07425 IPR016160 Aldehyde dehydrogenase, cysteine active site CV728_07425 IPR016163 Aldehyde dehydrogenase, C-terminal CV728_07425 IPR024090 Proline dehydrogenase PutA, domain I CV728_07425 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CV728_07425 IPR029041 FAD-linked oxidoreductase-like CV728_07425 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CV728_07425 IPR025703 Bifunctional protein PutA CV728_07425 IPR010985 Ribbon-helix-helix CV728_07425 IPR002872 Proline dehydrogenase domain CV728_07425 IPR024089 Proline dehydrogenase PutA, domain I/II CV728_07425 IPR024082 Proline dehydrogenase PutA, domain II CV728_07425 IPR015590 Aldehyde dehydrogenase domain CV728_07425 IPR016161 Aldehyde/histidinol dehydrogenase CV728_07470 IPR031807 HicB-like antitoxin of toxin-antitoxin system CV728_07470 IPR035069 TTHA1013/TTHA0281-like CV728_07490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07490 IPR001091 Restriction/modification DNA-methylase CV728_07490 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07490 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CV728_07490 IPR002941 DNA methylase N-4/N-6 CV728_07495 IPR001091 Restriction/modification DNA-methylase CV728_07495 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07495 IPR002941 DNA methylase N-4/N-6 CV728_07495 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CV728_07495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07510 IPR004753 Cell shape determining protein MreB CV728_07515 IPR004487 Clp protease, ATP-binding subunit ClpX CV728_07515 IPR019489 Clp ATPase, C-terminal CV728_07515 IPR003959 ATPase, AAA-type, core CV728_07515 IPR003593 AAA+ ATPase domain CV728_07515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07515 IPR010603 Zinc finger, ClpX C4-type CV728_07520 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CV728_07520 IPR001451 Hexapeptide repeat CV728_07520 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CV728_07520 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CV728_07520 IPR011004 Trimeric LpxA-like superfamily CV728_07525 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CV728_07525 IPR029069 HotDog domain superfamily CV728_07525 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CV728_07535 IPR024046 Flagellar assembly factor FliW domain superfamily CV728_07535 IPR003775 Flagellar assembly factor FliW CV728_07540 IPR017689 Outer membrane protein assembly factor BamD CV728_07540 IPR039565 Outer membrane lipoprotein BamD-like CV728_07540 IPR011990 Tetratricopeptide-like helical domain superfamily CV728_07545 IPR015947 PUA-like superfamily CV728_07545 IPR020568 Ribosomal protein S5 domain 2-type fold CV728_07545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CV728_07545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07545 IPR003111 Lon, substrate-binding domain CV728_07545 IPR027065 Lon protease CV728_07545 IPR008269 Peptidase S16, Lon proteolytic domain CV728_07545 IPR027543 Lon protease, bacterial CV728_07545 IPR003593 AAA+ ATPase domain CV728_07545 IPR008268 Peptidase S16, active site CV728_07545 IPR003959 ATPase, AAA-type, core CV728_07545 IPR004815 Lon protease, bacterial/eukaryotic-type CV728_07550 IPR003099 Prephenate dehydrogenase CV728_07550 IPR002912 ACT domain CV728_07550 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CV728_07550 IPR036291 NAD(P)-binding domain superfamily CV728_07565 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CV728_07565 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07565 IPR001091 Restriction/modification DNA-methylase CV728_07565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07565 IPR002941 DNA methylase N-4/N-6 CV728_07570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07570 IPR006935 Helicase/UvrB, N-terminal CV728_07570 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_07575 IPR006638 Elp3/MiaB/NifB CV728_07575 IPR024177 Biotin synthase CV728_07575 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CV728_07575 IPR010722 Biotin and thiamin synthesis-associated domain CV728_07575 IPR007197 Radical SAM CV728_07575 IPR013785 Aldolase-type TIM barrel CV728_07580 IPR017039 Virulence factor BrkB CV728_07580 IPR023679 Uncharacterised protein family UPF0761, bacterial CV728_07625 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 CV728_07625 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CV728_07630 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CV728_07635 IPR018022 IPP transferase CV728_07635 IPR039657 Dimethylallyltransferase CV728_07635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07645 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07645 IPR025247 Adenine-specific methylase EcoRI CV728_07650 IPR002941 DNA methylase N-4/N-6 CV728_07650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_07650 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_07650 IPR001091 Restriction/modification DNA-methylase CV728_07655 IPR017754 Agmatine deiminase CV728_07655 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CV728_07660 IPR041440 HypF, Kae1-like domain CV728_07660 IPR017968 Acylphosphatase, conserved site CV728_07660 IPR036046 Acylphosphatase-like domain superfamily CV728_07660 IPR006070 YrdC-like domain CV728_07660 IPR001792 Acylphosphatase-like domain CV728_07660 IPR011125 Zinc finger, HypF-type CV728_07660 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CV728_07660 IPR004421 Carbamoyltransferase, HypF-type CV728_07665 IPR036921 PurM-like, N-terminal domain superfamily CV728_07665 IPR011854 Carbamoyl dehydratase HypE CV728_07665 IPR010918 PurM-like, C-terminal domain CV728_07665 IPR036676 PurM-like, C-terminal domain superfamily CV728_07665 IPR016188 PurM-like, N-terminal domain CV728_07670 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase CV728_07670 IPR001509 NAD-dependent epimerase/dehydratase CV728_07670 IPR036291 NAD(P)-binding domain superfamily CV728_07675 IPR036291 NAD(P)-binding domain superfamily CV728_07675 IPR016040 NAD(P)-binding domain CV728_07675 IPR006368 GDP-mannose 4,6-dehydratase CV728_07680 IPR014710 RmlC-like jelly roll fold CV728_07680 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CV728_07680 IPR005835 Nucleotidyl transferase domain CV728_07680 IPR029044 Nucleotide-diphospho-sugar transferases CV728_07680 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CV728_07680 IPR011051 RmlC-like cupin domain superfamily CV728_07715 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CV728_07715 IPR004401 Nucleoid-associated protein YbaB/EbfC family CV728_07720 IPR009010 Aspartate decarboxylase-like domain superfamily CV728_07720 IPR003190 Aspartate decarboxylase CV728_07725 IPR003959 ATPase, AAA-type, core CV728_07725 IPR019489 Clp ATPase, C-terminal CV728_07725 IPR036628 Clp, N-terminal domain superfamily CV728_07725 IPR003593 AAA+ ATPase domain CV728_07725 IPR004176 Clp, N-terminal CV728_07725 IPR028299 ClpA/B, conserved site 2 CV728_07725 IPR041546 ClpA/ClpB, AAA lid domain CV728_07725 IPR018368 ClpA/B, conserved site 1 CV728_07725 IPR001270 ClpA/B family CV728_07725 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CV728_07725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07730 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CV728_07730 IPR003769 Adaptor protein ClpS, core CV728_07730 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CV728_07735 IPR006016 UspA CV728_07735 IPR006015 Universal stress protein A family CV728_07735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_07745 IPR004472 Dethiobiotin synthase BioD CV728_07745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07750 IPR011088 Bacteriophage phiNM3, A0EWY4 CV728_07755 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CV728_07755 IPR024084 Isopropylmalate dehydrogenase-like domain CV728_07755 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CV728_07760 IPR016142 Citrate synthase-like, large alpha subdomain CV728_07760 IPR036969 Citrate synthase superfamily CV728_07760 IPR019810 Citrate synthase active site CV728_07760 IPR002020 Citrate synthase CV728_07760 IPR016143 Citrate synthase-like, small alpha subdomain CV728_07760 IPR024176 Citrate synthase, bacterial-type CV728_07785 IPR017850 Alkaline-phosphatase-like, core domain superfamily CV728_07785 IPR012549 Phosphoethanolamine transferase, N-terminal CV728_07785 IPR000917 Sulfatase, N-terminal CV728_07785 IPR040423 Phosphoethanolamine transferase CV728_07790 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CV728_07790 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CV728_07795 IPR005730 Carboxynorspermidine decarboxylase CV728_07795 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CV728_07795 IPR029066 PLP-binding barrel CV728_07795 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CV728_07800 IPR011006 CheY-like superfamily CV728_07800 IPR036388 Winged helix-like DNA-binding domain superfamily CV728_07800 IPR001789 Signal transduction response regulator, receiver domain CV728_07800 IPR039420 Transcriptional regulatory protein WalR-like CV728_07800 IPR001867 OmpR/PhoB-type DNA-binding domain CV728_07835 IPR004506 tRNA-specific 2-thiouridylase CV728_07835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_07835 IPR023382 Adenine nucleotide alpha hydrolase-like domains CV728_07840 IPR002694 Zinc finger, CHC2-type CV728_07840 IPR030846 DNA primase DnaG, bacteria CV728_07840 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CV728_07840 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain CV728_07840 IPR034151 Bacterial DnaG primase, TOPRIM domain CV728_07840 IPR013264 DNA primase, catalytic core, N-terminal CV728_07840 IPR036977 DNA Primase, CHC2-type zinc finger CV728_07840 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CV728_07840 IPR006295 DNA primase, DnaG CV728_07840 IPR006171 TOPRIM domain CV728_07850 IPR011032 GroES-like superfamily CV728_07850 IPR018369 Chaperonin GroES, conserved site CV728_07850 IPR037124 GroES chaperonin superfamily CV728_07850 IPR020818 GroES chaperonin family CV728_07855 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CV728_07855 IPR001844 Chaperonin Cpn60 CV728_07855 IPR027413 GroEL-like equatorial domain superfamily CV728_07855 IPR027409 GroEL-like apical domain superfamily CV728_07855 IPR002423 Chaperonin Cpn60/TCP-1 family CV728_07855 IPR018370 Chaperonin Cpn60, conserved site CV728_07890 IPR003721 Pantoate-beta-alanine ligase CV728_07890 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CV728_07890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_07890 IPR004821 Cytidyltransferase-like domain CV728_07895 IPR011060 Ribulose-phosphate binding barrel CV728_07895 IPR013785 Aldolase-type TIM barrel CV728_07895 IPR014732 Orotidine 5'-phosphate decarboxylase CV728_07895 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CV728_07895 IPR001754 Orotidine 5'-phosphate decarboxylase domain CV728_07900 IPR036874 Carbonic anhydrase superfamily CV728_07900 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CV728_07900 IPR001765 Carbonic anhydrase CV728_07905 IPR006218 DAHP synthetase I/KDSA CV728_07905 IPR006269 3-deoxy-8-phosphooctulonate synthase CV728_07905 IPR013785 Aldolase-type TIM barrel CV728_07910 IPR036467 Lumazine/riboflavin synthase superfamily CV728_07910 IPR002180 Lumazine/riboflavin synthase CV728_07910 IPR034964 Lumazine synthase CV728_07915 IPR011605 NusB antitermination factor CV728_07915 IPR035926 NusB-like superfamily CV728_07915 IPR006027 NusB/RsmB/TIM44 CV728_07925 IPR025217 Domain of unknown function DUF3944 CV728_07925 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 CV728_07935 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 CV728_07940 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 CV728_07950 IPR019776 Flagellar basal body rod protein, conserved site CV728_07950 IPR001444 Flagellar basal body rod protein, N-terminal CV728_07950 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CV728_07950 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CV728_07950 IPR012834 Flagellar basal-body rod FlgG CV728_07950 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CV728_07955 IPR017860 Peptidase M22, conserved site CV728_07955 IPR017861 Kae1/TsaD family CV728_07955 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CV728_07955 IPR000905 Gcp-like domain CV728_07960 IPR037539 4-hydroxythreonine-4-phosphate dehydrogenase, epsilonproteobacteria CV728_07960 IPR005255 PdxA family CV728_07965 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CV728_07965 IPR013785 Aldolase-type TIM barrel CV728_07965 IPR036130 Pyridoxine 5'-phosphate synthase CV728_07970 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CV728_07970 IPR000715 Glycosyl transferase, family 4 CV728_07975 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CV728_07975 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CV728_07985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CV728_07985 IPR035906 MetI-like superfamily CV728_07990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_07990 IPR018449 NIL domain CV728_07990 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CV728_07990 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CV728_07990 IPR017871 ABC transporter, conserved site CV728_07990 IPR003439 ABC transporter-like CV728_07990 IPR026253 Methionine import ATP-binding protein MetN CV728_07990 IPR003593 AAA+ ATPase domain CV728_08000 IPR017938 Riboflavin synthase-like beta-barrel CV728_08000 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CV728_08000 IPR026017 Lumazine-binding domain CV728_08000 IPR001783 Lumazine-binding protein CV728_08005 IPR018228 Deoxyribonuclease, TatD-related, conserved site CV728_08005 IPR015991 Uncharacterised hydrolase TatD-type CV728_08005 IPR032466 Metal-dependent hydrolase CV728_08005 IPR001130 TatD family CV728_08010 IPR018392 LysM domain CV728_08010 IPR000189 Prokaryotic transglycosylase, active site CV728_08010 IPR036779 LysM domain superfamily CV728_08010 IPR008258 Transglycosylase SLT domain 1 CV728_08010 IPR023346 Lysozyme-like domain superfamily CV728_08015 IPR036680 Sporulation-like domain superfamily CV728_08015 IPR007730 Sporulation-like domain CV728_08015 IPR012997 Rare lipoprotein A CV728_08015 IPR036908 RlpA-like domain superfamily CV728_08015 IPR009009 RlpA-like protein, double-psi beta-barrel domain CV728_08015 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CV728_08020 IPR010023 KdsC family CV728_08020 IPR023214 HAD superfamily CV728_08020 IPR036412 HAD-like superfamily CV728_08035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_08035 IPR030393 EngB-type guanine nucleotide-binding (G) domain CV728_08035 IPR006073 GTP binding domain CV728_08035 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CV728_08045 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CV728_08045 IPR005311 Penicillin-binding protein, dimerisation domain CV728_08045 IPR012338 Beta-lactamase/transpeptidase-like CV728_08045 IPR017790 Penicillin-binding protein 2 CV728_08045 IPR001460 Penicillin-binding protein, transpeptidase CV728_08055 IPR004872 Lipoprotein NlpA family CV728_08060 IPR013766 Thioredoxin domain CV728_08060 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CV728_08060 IPR019479 Peroxiredoxin, C-terminal CV728_08060 IPR024706 Peroxiredoxin, AhpC-type CV728_08060 IPR036249 Thioredoxin-like superfamily CV728_08075 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CV728_08075 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CV728_08080 IPR001444 Flagellar basal body rod protein, N-terminal CV728_08080 IPR019776 Flagellar basal body rod protein, conserved site CV728_08080 IPR006300 Flagellar basal-body rod protein FlgB CV728_08085 IPR006299 Flagellar basal-body rod protein FlgC CV728_08085 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CV728_08085 IPR019776 Flagellar basal body rod protein, conserved site CV728_08085 IPR001444 Flagellar basal body rod protein, N-terminal CV728_08090 IPR001624 Flagellar hook-basal body complex protein FliE CV728_08100 IPR005311 Penicillin-binding protein, dimerisation domain CV728_08100 IPR001460 Penicillin-binding protein, transpeptidase CV728_08100 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CV728_08100 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CV728_08100 IPR012338 Beta-lactamase/transpeptidase-like CV728_08105 IPR018101 Translation elongation factor Ts, conserved site CV728_08105 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CV728_08105 IPR001816 Translation elongation factor EFTs/EF1B CV728_08105 IPR009060 UBA-like superfamily CV728_08105 IPR036402 Elongation factor Ts, dimerisation domain superfamily CV728_08110 IPR001865 Ribosomal protein S2 CV728_08110 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CV728_08110 IPR018130 Ribosomal protein S2, conserved site CV728_08110 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CV728_08115 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CV728_08115 IPR014152 DNA helicase subunit AddA CV728_08115 IPR011604 Exonuclease, phage-type/RecB, C-terminal CV728_08115 IPR000212 DNA helicase, UvrD/REP type CV728_08115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_08115 IPR034739 UvrD/AddA helicase, N-terminal CV728_08115 IPR014016 UvrD-like helicase, ATP-binding domain CV728_08115 IPR011335 Restriction endonuclease type II-like CV728_08115 IPR014017 UvrD-like DNA helicase, C-terminal CV728_08120 IPR004670 Na+/H+ antiporter NhaA CV728_08120 IPR023171 Na/H antiporter domain superfamily CV728_08125 IPR003849 Preprotein translocase YajC CV728_08135 IPR005665 Protein-export membrane protein SecF, bacterial CV728_08135 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CV728_08135 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CV728_08135 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CV728_08145 IPR002300 Aminoacyl-tRNA synthetase, class Ia CV728_08145 IPR025709 Leucyl-tRNA synthetase, editing domain CV728_08145 IPR015413 Methionyl/Leucyl tRNA synthetase CV728_08145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CV728_08145 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CV728_08145 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CV728_08145 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CV728_08145 IPR002302 Leucine-tRNA ligase CV728_08155 IPR001645 Folylpolyglutamate synthetase CV728_08155 IPR036615 Mur ligase, C-terminal domain superfamily CV728_08155 IPR004101 Mur ligase, C-terminal CV728_08155 IPR036565 Mur-like, catalytic domain superfamily CV728_08155 IPR018109 Folylpolyglutamate synthetase, conserved site CV728_08155 IPR013221 Mur ligase, central CV728_08165 IPR011055 Duplicated hybrid motif CV728_08165 IPR016047 Peptidase M23 CV728_08165 IPR007340 Opacity-associated protein A CV728_08175 IPR041471 UvrB, interaction domain CV728_08175 IPR005118 Transcription-repair-coupling factor, C-terminal domain CV728_08175 IPR037235 TRCF-like, C-terminal domain CV728_08175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_08175 IPR001650 Helicase, C-terminal CV728_08175 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_08175 IPR011545 DEAD/DEAH box helicase domain CV728_08175 IPR003711 CarD-like/TRCF domain CV728_08175 IPR036101 CarD-like/TRCF domain superfamily CV728_08175 IPR004576 Transcription-repair coupling factor CV728_08180 IPR014349 Rieske iron-sulphur protein CV728_08180 IPR005805 Rieske iron-sulphur protein, C-terminal CV728_08180 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CV728_08180 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CV728_08180 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CV728_08180 IPR006311 Twin-arginine translocation pathway, signal sequence CV728_08180 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CV728_08180 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CV728_08185 IPR016174 Di-haem cytochrome, transmembrane CV728_08185 IPR030689 Cytochrome b CV728_08185 IPR027387 Cytochrome b/b6-like domain superfamily CV728_08185 IPR005797 Cytochrome b/b6, N-terminal CV728_08185 IPR036150 Cytochrome b/b6, C-terminal domain superfamily CV728_08185 IPR005798 Cytochrome b/b6, C-terminal CV728_08210 IPR000146 Fructose-1,6-bisphosphatase class 1 CV728_08210 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CV728_08210 IPR023079 Sedoheptulose-1,7-bisphosphatase CV728_08215 IPR026019 Ribulose-phosphate 3-epimerase CV728_08215 IPR013785 Aldolase-type TIM barrel CV728_08215 IPR011060 Ribulose-phosphate binding barrel CV728_08215 IPR000056 Ribulose-phosphate 3-epimerase-like CV728_08220 IPR012337 Ribonuclease H-like superfamily CV728_08220 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CV728_08220 IPR040982 DNA polymerase III alpha subunit finger domain CV728_08220 IPR024754 DNA polymerase III polC-like, N-terminal domain II CV728_08220 IPR028112 DNA polymerase III polC-type, N-terminal domain I CV728_08220 IPR029460 DNA polymerase, helix-hairpin-helix motif CV728_08220 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CV728_08220 IPR013520 Exonuclease, RNase T/DNA polymerase III CV728_08220 IPR004013 PHP domain CV728_08220 IPR003141 Polymerase/histidinol phosphatase, N-terminal CV728_08220 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type CV728_08220 IPR036397 Ribonuclease H superfamily CV728_08225 IPR006597 Sel1-like repeat CV728_08225 IPR011990 Tetratricopeptide-like helical domain superfamily CV728_08225 IPR040239 Beta-lactamase HcpB-like CV728_08225 IPR019734 Tetratricopeptide repeat CV728_08355 IPR034151 Bacterial DnaG primase, TOPRIM domain CV728_08355 IPR002694 Zinc finger, CHC2-type CV728_08355 IPR013264 DNA primase, catalytic core, N-terminal CV728_08355 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CV728_08355 IPR006295 DNA primase, DnaG CV728_08355 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CV728_08355 IPR030846 DNA primase DnaG, bacteria CV728_08355 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain CV728_08355 IPR006171 TOPRIM domain CV728_08355 IPR036977 DNA Primase, CHC2-type zinc finger CV728_08410 IPR003395 RecF/RecN/SMC, N-terminal CV728_08410 IPR003593 AAA+ ATPase domain CV728_08410 IPR004604 DNA recombination/repair protein RecN CV728_08410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_08415 IPR002504 NAD kinase CV728_08415 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CV728_08415 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CV728_08415 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CV728_08430 IPR013154 Alcohol dehydrogenase, N-terminal CV728_08430 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CV728_08430 IPR011032 GroES-like superfamily CV728_08430 IPR036291 NAD(P)-binding domain superfamily CV728_08430 IPR020843 Polyketide synthase, enoylreductase domain CV728_08430 IPR013149 Alcohol dehydrogenase, C-terminal CV728_08435 IPR008141 Alanine dehydrogenase CV728_08435 IPR036291 NAD(P)-binding domain superfamily CV728_08435 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CV728_08435 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CV728_08435 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CV728_08435 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CV728_08440 IPR023696 Ureohydrolase domain superfamily CV728_08440 IPR006035 Ureohydrolase CV728_08440 IPR005923 Formiminoglutamase CV728_08440 IPR020855 Ureohydrolase, manganese-binding site CV728_08455 IPR004473 Restriction endonuclease, type I, HsdR CV728_08455 IPR040980 SWI2/SNF2 ATPase CV728_08455 IPR021810 Protein of unknown function DUF3387 CV728_08455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CV728_08455 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CV728_08455 IPR014001 Helicase superfamily 1/2, ATP-binding domain CV728_08460 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CV728_08460 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CV728_08460 IPR004546 Restriction endonuclease, type I, HsdM CV728_08460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CV728_08460 IPR003356 DNA methylase, adenine-specific CV728_08460 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CV728_08475 IPR003669 Thymidylate synthase ThyX CV728_08475 IPR036098 Thymidylate synthase ThyX superfamily CV728_08480 IPR017932 Glutamine amidotransferase type 2 domain CV728_08480 IPR001347 Sugar isomerase (SIS) CV728_08480 IPR029055 Nucleophile aminohydrolases, N-terminal CV728_08480 IPR035466 GlmS/AgaS, SIS domain 1 CV728_08480 IPR035490 GlmS/FrlB, SIS domain 2 CV728_08480 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CV728_08485 IPR019469 Protein of unknown function DUF2443 CV728_08485 IPR038018 Uncharacterised protein HP_1531