locus-tag class description HPOKI128_00005 PF01029 NusB family HPOKI128_00010 PF13099 Domain of unknown function (DUF3944) HPOKI128_00010 PF03981 Ubiquinol-cytochrome C chaperone HPOKI128_00025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPOKI128_00025 PF00460 Flagella basal body rod protein HPOKI128_00030 PF00814 Glycoprotease family HPOKI128_00035 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPOKI128_00040 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPOKI128_00045 PF00953 Glycosyl transferase family 4 HPOKI128_00050 PF01569 PAP2 superfamily HPOKI128_00060 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_00065 PF09383 NIL domain HPOKI128_00065 PF00005 ABC transporter HPOKI128_00075 PF00677 Lumazine binding domain HPOKI128_00080 PF01026 TatD related DNase HPOKI128_00085 PF01476 LysM domain HPOKI128_00085 PF01464 Transglycosylase SLT domain HPOKI128_00090 PF03330 Lytic transglycolase HPOKI128_00090 PF05036 Sporulation related domain HPOKI128_00110 PF01926 50S ribosome-binding GTPase HPOKI128_00120 PF03717 Penicillin-binding Protein dimerisation domain HPOKI128_00120 PF00905 Penicillin binding protein transpeptidase domain HPOKI128_00125 PF03180 NLPA lipoprotein HPOKI128_00130 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPOKI128_00130 PF00578 AhpC/TSA family HPOKI128_00140 PF01098 Cell cycle protein HPOKI128_00145 PF00460 Flagella basal body rod protein HPOKI128_00150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPOKI128_00150 PF00460 Flagella basal body rod protein HPOKI128_00155 PF02049 Flagellar hook-basal body complex protein FliE HPOKI128_00160 PF03717 Penicillin-binding Protein dimerisation domain HPOKI128_00160 PF00905 Penicillin binding protein transpeptidase domain HPOKI128_00170 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system HPOKI128_00190 PF00033 Cytochrome b/b6/petB HPOKI128_00190 PF00032 Cytochrome b(C-terminal)/b6/petD HPOKI128_00195 PF00355 Rieske [2Fe-2S] domain HPOKI128_00195 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPOKI128_00200 PF17757 UvrB interaction domain HPOKI128_00200 PF03461 TRCF domain HPOKI128_00200 PF00271 Helicase conserved C-terminal domain HPOKI128_00200 PF00270 DEAD/DEAH box helicase HPOKI128_00200 PF02559 CarD-like/TRCF domain HPOKI128_00210 PF04225 Opacity-associated protein A LysM-like domain HPOKI128_00210 PF01551 Peptidase family M23 HPOKI128_00220 PF08245 Mur ligase middle domain HPOKI128_00220 PF02875 Mur ligase family, glutamate ligase domain HPOKI128_00230 PF00133 tRNA synthetases class I (I, L, M and V) HPOKI128_00230 PF13603 Leucyl-tRNA synthetase, Domain 2 HPOKI128_00230 PF09334 tRNA synthetases class I (M) HPOKI128_00240 PF02355 Protein export membrane protein HPOKI128_00240 PF07549 SecD/SecF GG Motif HPOKI128_00245 PF02355 Protein export membrane protein HPOKI128_00250 PF02699 Preprotein translocase subunit HPOKI128_00255 PF06965 Na+/H+ antiporter 1 HPOKI128_00260 PF00580 UvrD/REP helicase N-terminal domain HPOKI128_00260 PF12705 PD-(D/E)XK nuclease superfamily HPOKI128_00260 PF13361 UvrD-like helicase C-terminal domain HPOKI128_00270 PF00318 Ribosomal protein S2 HPOKI128_00275 PF00889 Elongation factor TS HPOKI128_00300 PF01797 Transposase IS200 like HPOKI128_00305 PF00145 C-5 cytosine-specific DNA methylase HPOKI128_00320 PF00474 Sodium:solute symporter family HPOKI128_00325 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPOKI128_00325 PF14850 DNA-binding domain of Proline dehydrogenase HPOKI128_00325 PF01619 Proline dehydrogenase HPOKI128_00325 PF00171 Aldehyde dehydrogenase family HPOKI128_00385 PF01774 UreD urease accessory protein HPOKI128_00390 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPOKI128_00395 PF01730 UreF HPOKI128_00400 PF05194 UreE urease accessory protein, C-terminal domain HPOKI128_00400 PF02814 UreE urease accessory protein, N-terminal domain HPOKI128_00405 PF02293 AmiS/UreI family transporter HPOKI128_00415 PF00449 Urease alpha-subunit, N-terminal domain HPOKI128_00415 PF01979 Amidohydrolase family HPOKI128_00420 PF00699 Urease beta subunit HPOKI128_00420 PF00547 Urease, gamma subunit HPOKI128_00430 PF01252 Signal peptidase (SPase) II HPOKI128_00435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPOKI128_00435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPOKI128_00435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPOKI128_00435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPOKI128_00440 PF01649 Ribosomal protein S20 HPOKI128_00445 PF00472 RF-1 domain HPOKI128_00445 PF03462 PCRF domain HPOKI128_00465 PF01797 Transposase IS200 like HPOKI128_00480 PF00672 HAMP domain HPOKI128_00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPOKI128_00480 PF17200 Single Cache domain 2 HPOKI128_00490 PF00380 Ribosomal protein S9/S16 HPOKI128_00495 PF00572 Ribosomal protein L13 HPOKI128_00505 PF17402 Family of unknown function (DUF5408) HPOKI128_00510 PF06039 Malate:quinone oxidoreductase (Mqo) HPOKI128_00520 PF00140 Sigma-70 factor, region 1.2 HPOKI128_00520 PF04539 Sigma-70 region 3 HPOKI128_00520 PF04545 Sigma-70, region 4 HPOKI128_00520 PF04542 Sigma-70 region 2 HPOKI128_00525 PF01048 Phosphorylase superfamily HPOKI128_00530 PF00698 Acyl transferase domain HPOKI128_00545 PF01555 DNA methylase HPOKI128_00560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPOKI128_00560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPOKI128_00570 PF00291 Pyridoxal-phosphate dependent enzyme HPOKI128_00580 PF00672 HAMP domain HPOKI128_00580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPOKI128_00580 PF16591 Helical bimodular sensor domain HPOKI128_00585 PF02677 Epoxyqueuosine reductase QueH HPOKI128_00595 PF00535 Glycosyl transferase family 2 HPOKI128_00605 PF00149 Calcineurin-like phosphoesterase HPOKI128_00605 PF02872 5'-nucleotidase, C-terminal domain HPOKI128_00610 PF02664 S-Ribosylhomocysteinase (LuxS) HPOKI128_00615 PF01053 Cys/Met metabolism PLP-dependent enzyme HPOKI128_00620 PF00291 Pyridoxal-phosphate dependent enzyme HPOKI128_00630 PF00012 Hsp70 protein HPOKI128_00635 PF01025 GrpE HPOKI128_00660 PF00669 Bacterial flagellin N-terminal helical region HPOKI128_00660 PF00700 Bacterial flagellin C-terminal helical region HPOKI128_00660 PF07196 Flagellin hook IN motif HPOKI128_00665 PF01396 Topoisomerase DNA binding C4 zinc finger HPOKI128_00665 PF01131 DNA topoisomerase HPOKI128_00665 PF01751 Toprim domain HPOKI128_00670 PF04055 Radical SAM superfamily HPOKI128_00680 PF00391 PEP-utilising enzyme, mobile domain HPOKI128_00680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPOKI128_00680 PF02896 PEP-utilising enzyme, TIM barrel domain HPOKI128_00690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPOKI128_00690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPOKI128_00690 PF03129 Anticodon binding domain HPOKI128_00695 PF05198 Translation initiation factor IF-3, N-terminal domain HPOKI128_00695 PF00707 Translation initiation factor IF-3, C-terminal domain HPOKI128_00700 PF01632 Ribosomal protein L35 HPOKI128_00705 PF00453 Ribosomal protein L20 HPOKI128_00740 PF03315 Serine dehydratase beta chain HPOKI128_00740 PF03313 Serine dehydratase alpha chain HPOKI128_00745 PF03222 Tryptophan/tyrosine permease family HPOKI128_00750 PF01474 Class-II DAHP synthetase family HPOKI128_00765 PF00578 AhpC/TSA family HPOKI128_00770 PF02589 LUD domain HPOKI128_00775 PF02589 LUD domain HPOKI128_00775 PF11870 Domain of unknown function (DUF3390) HPOKI128_00775 PF13183 4Fe-4S dicluster domain HPOKI128_00780 PF02754 Cysteine-rich domain HPOKI128_00785 PF02652 L-lactate permease HPOKI128_00790 PF02652 L-lactate permease HPOKI128_00795 PF00633 Helix-hairpin-helix motif HPOKI128_00795 PF00730 HhH-GPD superfamily base excision DNA repair protein HPOKI128_00795 PF14815 NUDIX domain HPOKI128_00800 PF00939 Sodium:sulfate symporter transmembrane region HPOKI128_00805 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPOKI128_00820 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPOKI128_00820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPOKI128_00855 PF00154 recA bacterial DNA recombination protein HPOKI128_00860 PF03952 Enolase, N-terminal domain HPOKI128_00860 PF00113 Enolase, C-terminal TIM barrel domain HPOKI128_00875 PF01202 Shikimate kinase HPOKI128_00890 PF08238 Sel1 repeat HPOKI128_00900 PF01709 Transcriptional regulator HPOKI128_00905 PF00490 Delta-aminolevulinic acid dehydratase HPOKI128_00910 PF00672 HAMP domain HPOKI128_00910 PF00512 His Kinase A (phospho-acceptor) domain HPOKI128_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPOKI128_00915 PF00486 Transcriptional regulatory protein, C terminal HPOKI128_00915 PF00072 Response regulator receiver domain HPOKI128_00940 PF00472 RF-1 domain HPOKI128_00940 PF03462 PCRF domain HPOKI128_00945 PF00994 Probable molybdopterin binding domain HPOKI128_00945 PF03454 MoeA C-terminal region (domain IV) HPOKI128_00945 PF03453 MoeA N-terminal region (domain I and II) HPOKI128_00960 PF00639 PPIC-type PPIASE domain HPOKI128_00965 PF01116 Fructose-bisphosphate aldolase class-II HPOKI128_00970 PF08207 Elongation factor P (EF-P) KOW-like domain HPOKI128_00970 PF01132 Elongation factor P (EF-P) OB domain HPOKI128_00970 PF09285 Elongation factor P, C-terminal HPOKI128_00980 PF03102 NeuB family HPOKI128_00980 PF08666 SAF domain HPOKI128_00985 PF00005 ABC transporter HPOKI128_00990 PF00795 Carbon-nitrogen hydrolase HPOKI128_01005 PF01336 OB-fold nucleic acid binding domain HPOKI128_01005 PF00152 tRNA synthetases class II (D, K and N) HPOKI128_01010 PF00464 Serine hydroxymethyltransferase HPOKI128_01040 PF03350 Uncharacterized protein family, UPF0114 HPOKI128_01045 PF13091 PLD-like domain HPOKI128_01050 PF13183 4Fe-4S dicluster domain HPOKI128_01050 PF13085 2Fe-2S iron-sulfur cluster binding domain HPOKI128_01055 PF02910 Fumarate reductase flavoprotein C-term HPOKI128_01055 PF00890 FAD binding domain HPOKI128_01060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPOKI128_01065 PF00121 Triosephosphate isomerase HPOKI128_01075 PF00132 Bacterial transferase hexapeptide (six repeats) HPOKI128_01075 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPOKI128_01080 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPOKI128_01080 PF02772 S-adenosylmethionine synthetase, central domain HPOKI128_01080 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPOKI128_01085 PF00334 Nucleoside diphosphate kinase HPOKI128_01095 PF01783 Ribosomal L32p protein family HPOKI128_01100 PF02504 Fatty acid synthesis protein HPOKI128_01105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPOKI128_01105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPOKI128_01130 PF01883 Iron-sulfur cluster assembly protein HPOKI128_01130 PF10609 NUBPL iron-transfer P-loop NTPase HPOKI128_01145 PF00183 Hsp90 protein HPOKI128_01150 PF13181 Tetratricopeptide repeat HPOKI128_01150 PF08238 Sel1 repeat HPOKI128_01160 PF01546 Peptidase family M20/M25/M40 HPOKI128_01160 PF07687 Peptidase dimerisation domain HPOKI128_01165 PF01134 Glucose inhibited division protein A HPOKI128_01165 PF13932 GidA associated domain HPOKI128_01170 PF00939 Sodium:sulfate symporter transmembrane region HPOKI128_01180 PF13288 DXP reductoisomerase C-terminal domain HPOKI128_01180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPOKI128_01180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPOKI128_01190 PF01161 Phosphatidylethanolamine-binding protein HPOKI128_01200 PF00266 Aminotransferase class-V HPOKI128_01205 PF01106 NifU-like domain HPOKI128_01205 PF01592 NifU-like N terminal domain HPOKI128_01205 PF04324 BFD-like [2Fe-2S] binding domain HPOKI128_01220 PF18073 Rubredoxin metal binding domain HPOKI128_01230 PF01625 Peptide methionine sulfoxide reductase HPOKI128_01230 PF01641 SelR domain HPOKI128_01240 PF01925 Sulfite exporter TauE/SafE HPOKI128_01250 PF01740 STAS domain HPOKI128_01250 PF00916 Sulfate permease family HPOKI128_01265 PF02348 Cytidylyltransferase HPOKI128_01280 PF03738 Glutathionylspermidine synthase preATP-grasp HPOKI128_01295 PF13176 Tetratricopeptide repeat HPOKI128_01295 PF13181 Tetratricopeptide repeat HPOKI128_01295 PF08238 Sel1 repeat HPOKI128_01305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPOKI128_01305 PF03900 Porphobilinogen deaminase, C-terminal domain HPOKI128_01310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPOKI128_01310 PF04073 Aminoacyl-tRNA editing domain HPOKI128_01310 PF03129 Anticodon binding domain HPOKI128_01315 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPOKI128_01315 PF01488 Shikimate / quinate 5-dehydrogenase HPOKI128_01315 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPOKI128_01320 PF00348 Polyprenyl synthetase HPOKI128_01335 PF00210 Ferritin-like domain HPOKI128_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPOKI128_01340 PF00512 His Kinase A (phospho-acceptor) domain HPOKI128_01350 PF02119 Flagellar P-ring protein HPOKI128_01355 PF00270 DEAD/DEAH box helicase HPOKI128_01355 PF00271 Helicase conserved C-terminal domain HPOKI128_01370 PF00005 ABC transporter HPOKI128_01370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPOKI128_01375 PF12911 N-terminal TM domain of oligopeptide transport permease C HPOKI128_01375 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_01400 PF00709 Adenylosuccinate synthetase HPOKI128_01415 PF02163 Peptidase family M50 HPOKI128_01420 PF13742 OB-fold nucleic acid binding domain HPOKI128_01420 PF02601 Exonuclease VII, large subunit HPOKI128_01425 PF01555 DNA methylase HPOKI128_01425 PF18273 Type III R-M EcoP15I C-terminal domain HPOKI128_01440 PF01555 DNA methylase HPOKI128_01450 PF02683 Cytochrome C biogenesis protein transmembrane region HPOKI128_01455 PF01979 Amidohydrolase family HPOKI128_01460 PF01979 Amidohydrolase family HPOKI128_01470 PF00919 Uncharacterized protein family UPF0004 HPOKI128_01470 PF04055 Radical SAM superfamily HPOKI128_01495 PF03692 Putative zinc- or iron-chelating domain HPOKI128_01505 PF00218 Indole-3-glycerol phosphate synthase HPOKI128_01515 PF02541 Ppx/GppA phosphatase family HPOKI128_01520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPOKI128_01530 PF01702 Queuine tRNA-ribosyltransferase HPOKI128_01540 PF01761 3-dehydroquinate synthase HPOKI128_01550 PF04055 Radical SAM superfamily HPOKI128_01550 PF00919 Uncharacterized protein family UPF0004 HPOKI128_01555 PF00004 ATPase family associated with various cellular activities (AAA) HPOKI128_01555 PF01434 Peptidase family M41 HPOKI128_01555 PF17862 AAA+ lid domain HPOKI128_01575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPOKI128_01575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPOKI128_01590 PF04715 Anthranilate synthase component I, N terminal region HPOKI128_01590 PF00425 chorismate binding enzyme HPOKI128_01595 PF00795 Carbon-nitrogen hydrolase HPOKI128_01605 PF00829 Ribosomal prokaryotic L21 protein HPOKI128_01610 PF01016 Ribosomal L27 protein HPOKI128_01615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPOKI128_01620 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_01625 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_01625 PF12911 N-terminal TM domain of oligopeptide transport permease C HPOKI128_01630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPOKI128_01630 PF00005 ABC transporter HPOKI128_01635 PF00005 ABC transporter HPOKI128_01635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPOKI128_01640 PF01926 50S ribosome-binding GTPase HPOKI128_01640 PF01018 GTP1/OBG HPOKI128_01655 PF00202 Aminotransferase class-III HPOKI128_01670 PF00795 Carbon-nitrogen hydrolase HPOKI128_01675 PF01522 Polysaccharide deacetylase HPOKI128_01685 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPOKI128_01685 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPOKI128_01695 PF01243 Pyridoxamine 5'-phosphate oxidase HPOKI128_01695 PF10615 Protein of unknown function (DUF2470) HPOKI128_01700 PF00750 tRNA synthetases class I (R) HPOKI128_01700 PF03485 Arginyl tRNA synthetase N terminal domain HPOKI128_01700 PF05746 DALR anticodon binding domain HPOKI128_01705 PF02416 mttA/Hcf106 family HPOKI128_01710 PF00625 Guanylate kinase HPOKI128_01735 PF02107 Flagellar L-ring protein HPOKI128_01740 PF02348 Cytidylyltransferase HPOKI128_01745 PF02348 Cytidylyltransferase HPOKI128_01755 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPOKI128_01760 PF02540 NAD synthase HPOKI128_01775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPOKI128_01780 PF03776 Septum formation topological specificity factor MinE HPOKI128_01785 PF02481 DNA recombination-mediator protein A HPOKI128_01785 PF17782 DprA winged helix domain HPOKI128_01790 PF03652 Holliday junction resolvase HPOKI128_01795 PF08238 Sel1 repeat HPOKI128_01815 PF00849 RNA pseudouridylate synthase HPOKI128_01825 PF00117 Glutamine amidotransferase class-I HPOKI128_01825 PF06418 CTP synthase N-terminus HPOKI128_01835 PF08345 Flagellar M-ring protein C-terminal HPOKI128_01835 PF01514 Secretory protein of YscJ/FliF family HPOKI128_01840 PF14841 FliG middle domain HPOKI128_01840 PF01706 FliG C-terminal domain HPOKI128_01840 PF14842 FliG N-terminal domain HPOKI128_01850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPOKI128_01850 PF02779 Transketolase, pyrimidine binding domain HPOKI128_01850 PF02780 Transketolase, C-terminal domain HPOKI128_01855 PF00009 Elongation factor Tu GTP binding domain HPOKI128_01855 PF06421 GTP-binding protein LepA C-terminus HPOKI128_01855 PF00679 Elongation factor G C-terminus HPOKI128_01855 PF03144 Elongation factor Tu domain 2 HPOKI128_01870 PF00460 Flagella basal body rod protein HPOKI128_01870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPOKI128_01875 PF00083 Sugar (and other) transporter HPOKI128_01880 PF01580 FtsK/SpoIIIE family HPOKI128_01880 PF09397 Ftsk gamma domain HPOKI128_01880 PF17854 FtsK alpha domain HPOKI128_01895 PF01687 Riboflavin kinase HPOKI128_01895 PF06574 FAD synthetase HPOKI128_01900 PF01479 S4 domain HPOKI128_01900 PF00163 Ribosomal protein S4/S9 N-terminal domain HPOKI128_01910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPOKI128_01910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPOKI128_01920 PF00005 ABC transporter HPOKI128_01920 PF00664 ABC transporter transmembrane region HPOKI128_01945 PF03824 High-affinity nickel-transport protein HPOKI128_01965 PF00403 Heavy-metal-associated domain HPOKI128_01970 PF00403 Heavy-metal-associated domain HPOKI128_01975 PF01066 CDP-alcohol phosphatidyltransferase HPOKI128_01985 PF17862 AAA+ lid domain HPOKI128_01985 PF01434 Peptidase family M41 HPOKI128_01985 PF00004 ATPase family associated with various cellular activities (AAA) HPOKI128_02020 PF02527 rRNA small subunit methyltransferase G HPOKI128_02025 PF02547 Queuosine biosynthesis protein HPOKI128_02030 PF00902 Sec-independent protein translocase protein (TatC) HPOKI128_02040 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPOKI128_02040 PF05491 RuvB C-terminal winged helix domain HPOKI128_02040 PF17864 RuvB AAA lid domain HPOKI128_02045 PF02548 Ketopantoate hydroxymethyltransferase HPOKI128_02070 PF03775 Septum formation inhibitor MinC, C-terminal domain HPOKI128_02075 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPOKI128_02085 PF00288 GHMP kinases N terminal domain HPOKI128_02095 PF00009 Elongation factor Tu GTP binding domain HPOKI128_02095 PF11987 Translation-initiation factor 2 HPOKI128_02095 PF04760 Translation initiation factor IF-2, N-terminal region HPOKI128_02100 PF02033 Ribosome-binding factor A HPOKI128_02105 PF02576 RimP N-terminal domain HPOKI128_02105 PF17384 RimP C-terminal SH3 domain HPOKI128_02110 PF16177 Acetyl-coenzyme A synthetase N-terminus HPOKI128_02110 PF13193 AMP-binding enzyme C-terminal domain HPOKI128_02110 PF00501 AMP-binding enzyme HPOKI128_02115 PF00149 Calcineurin-like phosphoesterase HPOKI128_02120 PF00072 Response regulator receiver domain HPOKI128_02120 PF00486 Transcriptional regulatory protein, C terminal HPOKI128_02130 PF00771 FHIPEP family HPOKI128_02135 PF00312 Ribosomal protein S15 HPOKI128_02145 PF01220 Dehydroquinase class II HPOKI128_02150 PF00557 Metallopeptidase family M24 HPOKI128_02150 PF01321 Creatinase/Prolidase N-terminal domain HPOKI128_02155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPOKI128_02160 PF00448 SRP54-type protein, GTPase domain HPOKI128_02165 PF10609 NUBPL iron-transfer P-loop NTPase HPOKI128_02175 PF04542 Sigma-70 region 2 HPOKI128_02175 PF04539 Sigma-70 region 3 HPOKI128_02175 PF04545 Sigma-70, region 4 HPOKI128_02180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPOKI128_02180 PF02154 Flagellar motor switch protein FliM HPOKI128_02185 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPOKI128_02185 PF04509 CheC-like family HPOKI128_02200 PF01475 Ferric uptake regulator family HPOKI128_02205 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPOKI128_02205 PF12002 MgsA AAA+ ATPase C terminal HPOKI128_02205 PF01661 Macro domain HPOKI128_02205 PF16193 AAA C-terminal domain HPOKI128_02210 PF13411 MerR HTH family regulatory protein HPOKI128_02215 PF00226 DnaJ domain HPOKI128_02215 PF01556 DnaJ C terminal domain HPOKI128_02225 PF01367 5'-3' exonuclease, C-terminal SAM fold HPOKI128_02225 PF01612 3'-5' exonuclease HPOKI128_02225 PF00476 DNA polymerase family A HPOKI128_02225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPOKI128_02230 PF00072 Response regulator receiver domain HPOKI128_02230 PF00486 Transcriptional regulatory protein, C terminal HPOKI128_02235 PF02542 YgbB family HPOKI128_02235 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPOKI128_02240 PF17820 PDZ domain HPOKI128_02240 PF13180 PDZ domain HPOKI128_02245 PF00324 Amino acid permease HPOKI128_02250 PF01066 CDP-alcohol phosphatidyltransferase HPOKI128_02265 PF00701 Dihydrodipicolinate synthetase family HPOKI128_02275 PF01180 Dihydroorotate dehydrogenase HPOKI128_02280 PF13089 Polyphosphate kinase N-terminal domain HPOKI128_02280 PF13090 Polyphosphate kinase C-terminal domain 2 HPOKI128_02280 PF02503 Polyphosphate kinase middle domain HPOKI128_02280 PF17941 Polyphosphate kinase C-terminal domain 1 HPOKI128_02295 PF02384 N-6 DNA Methylase HPOKI128_02295 PF12161 HsdM N-terminal domain HPOKI128_02335 PF00999 Sodium/hydrogen exchanger family HPOKI128_02335 PF02254 TrkA-N domain HPOKI128_02355 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_02360 PF00005 ABC transporter HPOKI128_02360 PF08402 TOBE domain HPOKI128_02365 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPOKI128_02460 PF00830 Ribosomal L28 family HPOKI128_02475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HPOKI128_02475 PF00953 Glycosyl transferase family 4 HPOKI128_02480 PF08245 Mur ligase middle domain HPOKI128_02480 PF02875 Mur ligase family, glutamate ligase domain HPOKI128_02485 PF04359 Protein of unknown function (DUF493) HPOKI128_02490 PF03061 Thioesterase superfamily HPOKI128_02495 PF00209 Sodium:neurotransmitter symporter family HPOKI128_02500 PF00209 Sodium:neurotransmitter symporter family HPOKI128_02505 PF02253 Phospholipase A1 HPOKI128_02510 PF02768 DNA polymerase III beta subunit, C-terminal domain HPOKI128_02510 PF00712 DNA polymerase III beta subunit, N-terminal domain HPOKI128_02510 PF02767 DNA polymerase III beta subunit, central domain HPOKI128_02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPOKI128_02515 PF00986 DNA gyrase B subunit, carboxyl terminus HPOKI128_02515 PF00204 DNA gyrase B HPOKI128_02515 PF01751 Toprim domain HPOKI128_02530 PF01464 Transglycosylase SLT domain HPOKI128_02530 PF01551 Peptidase family M23 HPOKI128_02530 PF10145 Phage-related minor tail protein HPOKI128_02540 PF15436 Plasminogen-binding protein pgbA N-terminal HPOKI128_02540 PF15437 Plasminogen-binding protein pgbA C-terminal HPOKI128_02545 PF02913 FAD linked oxidases, C-terminal domain HPOKI128_02545 PF01565 FAD binding domain HPOKI128_02550 PF01113 Dihydrodipicolinate reductase, N-terminus HPOKI128_02550 PF05173 Dihydrodipicolinate reductase, C-terminus HPOKI128_02560 PF03951 Glutamine synthetase, beta-Grasp domain HPOKI128_02560 PF00120 Glutamine synthetase, catalytic domain HPOKI128_02570 PF03948 Ribosomal protein L9, C-terminal domain HPOKI128_02570 PF01281 Ribosomal protein L9, N-terminal domain HPOKI128_02575 PF00227 Proteasome subunit HPOKI128_02580 PF07724 AAA domain (Cdc48 subfamily) HPOKI128_02580 PF10431 C-terminal, D2-small domain, of ClpB protein HPOKI128_02585 PF07650 KH domain HPOKI128_02585 PF01926 50S ribosome-binding GTPase HPOKI128_02600 PF01177 Asp/Glu/Hydantoin racemase HPOKI128_02605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPOKI128_02605 PF07497 Rho termination factor, RNA-binding domain HPOKI128_02605 PF07498 Rho termination factor, N-terminal domain HPOKI128_02610 PF01197 Ribosomal protein L31 HPOKI128_02615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPOKI128_02620 PF00588 SpoU rRNA Methylase family HPOKI128_02620 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPOKI128_02640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPOKI128_02645 PF00109 Beta-ketoacyl synthase, N-terminal domain HPOKI128_02645 PF02801 Beta-ketoacyl synthase, C-terminal domain HPOKI128_02655 PF00550 Phosphopantetheine attachment site HPOKI128_02665 PF01165 Ribosomal protein S21 HPOKI128_02680 PF04224 Protein of unknown function, DUF417 HPOKI128_02685 PF01678 Diaminopimelate epimerase HPOKI128_02690 PF01594 AI-2E family transporter HPOKI128_02700 PF01926 50S ribosome-binding GTPase HPOKI128_02700 PF06071 Protein of unknown function (DUF933) HPOKI128_02705 PF02789 Cytosol aminopeptidase family, N-terminal domain HPOKI128_02705 PF00883 Cytosol aminopeptidase family, catalytic domain HPOKI128_02715 PF00156 Phosphoribosyl transferase domain HPOKI128_02725 PF02502 Ribose/Galactose Isomerase HPOKI128_02730 PF02163 Peptidase family M50 HPOKI128_02735 PF10502 Signal peptidase, peptidase S26 HPOKI128_02740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPOKI128_02740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPOKI128_02775 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPOKI128_02775 PF04509 CheC-like family HPOKI128_02780 PF00730 HhH-GPD superfamily base excision DNA repair protein HPOKI128_02780 PF00633 Helix-hairpin-helix motif HPOKI128_02785 PF04023 FeoA domain HPOKI128_02805 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPOKI128_02805 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPOKI128_02805 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPOKI128_02810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPOKI128_02850 PF00912 Transglycosylase HPOKI128_02850 PF00905 Penicillin binding protein transpeptidase domain HPOKI128_02855 PF00155 Aminotransferase class I and II HPOKI128_02860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPOKI128_02860 PF00672 HAMP domain HPOKI128_02860 PF12729 Four helix bundle sensory module for signal transduction HPOKI128_02865 PF00005 ABC transporter HPOKI128_02870 PF07196 Flagellin hook IN motif HPOKI128_02870 PF00700 Bacterial flagellin C-terminal helical region HPOKI128_02870 PF00669 Bacterial flagellin N-terminal helical region HPOKI128_02885 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPOKI128_02900 PF00873 AcrB/AcrD/AcrF family HPOKI128_02910 PF08502 LeuA allosteric (dimerisation) domain HPOKI128_02910 PF00682 HMGL-like HPOKI128_02920 PF00005 ABC transporter HPOKI128_02930 PF03120 NAD-dependent DNA ligase OB-fold domain HPOKI128_02930 PF01653 NAD-dependent DNA ligase adenylation domain HPOKI128_02930 PF00533 BRCA1 C Terminus (BRCT) domain HPOKI128_02935 PF00072 Response regulator receiver domain HPOKI128_02940 PF01336 OB-fold nucleic acid binding domain HPOKI128_02940 PF00152 tRNA synthetases class II (D, K and N) HPOKI128_02940 PF02938 GAD domain HPOKI128_02950 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HPOKI128_02960 PF00719 Inorganic pyrophosphatase HPOKI128_02965 PF00488 MutS domain V HPOKI128_02965 PF01713 Smr domain HPOKI128_02975 PF01225 Mur ligase family, catalytic domain HPOKI128_02975 PF02875 Mur ligase family, glutamate ligase domain HPOKI128_02975 PF08245 Mur ligase middle domain HPOKI128_02980 PF00155 Aminotransferase class I and II HPOKI128_02985 PF04551 GcpE protein HPOKI128_02990 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPOKI128_02990 PF14602 Hexapeptide repeat of succinyl-transferase HPOKI128_03005 PF02525 Flavodoxin-like fold HPOKI128_03010 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HPOKI128_03010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HPOKI128_03010 PF10518 TAT (twin-arginine translocation) pathway signal sequence HPOKI128_03015 PF00374 Nickel-dependent hydrogenase HPOKI128_03020 PF01292 Prokaryotic cytochrome b561 HPOKI128_03025 PF01750 Hydrogenase maturation protease HPOKI128_03050 PF06508 Queuosine biosynthesis protein QueC HPOKI128_03055 PF13735 tRNA nucleotidyltransferase domain 2 putative HPOKI128_03055 PF12627 Probable RNA and SrmB- binding site of polymerase A HPOKI128_03055 PF01743 Poly A polymerase head domain HPOKI128_03060 PF00881 Nitroreductase family HPOKI128_03065 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPOKI128_03070 PF02325 YGGT family HPOKI128_03075 PF01464 Transglycosylase SLT domain HPOKI128_03075 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPOKI128_03080 PF00483 Nucleotidyl transferase HPOKI128_03090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPOKI128_03095 PF10415 Fumarase C C-terminus HPOKI128_03095 PF00206 Lyase HPOKI128_03115 PF00210 Ferritin-like domain HPOKI128_03120 PF04055 Radical SAM superfamily HPOKI128_03125 PF07244 Surface antigen variable number repeat HPOKI128_03125 PF01103 Surface antigen HPOKI128_03130 PF04055 Radical SAM superfamily HPOKI128_03140 PF02934 GatB/GatE catalytic domain HPOKI128_03140 PF02637 GatB domain HPOKI128_03155 PF00075 RNase H HPOKI128_03160 PF14622 Ribonuclease-III-like HPOKI128_03160 PF00035 Double-stranded RNA binding motif HPOKI128_03165 PF01264 Chorismate synthase HPOKI128_03170 PF10788 Protein of unknown function (DUF2603) HPOKI128_03175 PF06969 HemN C-terminal domain HPOKI128_03175 PF04055 Radical SAM superfamily HPOKI128_03180 PF02754 Cysteine-rich domain HPOKI128_03195 PF00155 Aminotransferase class I and II HPOKI128_03205 PF00589 Phage integrase family HPOKI128_03205 PF18644 Phage integrase SAM-like domain HPOKI128_03210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPOKI128_03210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPOKI128_03215 PF01925 Sulfite exporter TauE/SafE HPOKI128_03220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPOKI128_03220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPOKI128_03225 PF02867 Ribonucleotide reductase, barrel domain HPOKI128_03225 PF03477 ATP cone domain HPOKI128_03225 PF00317 Ribonucleotide reductase, all-alpha domain HPOKI128_03240 PF14602 Hexapeptide repeat of succinyl-transferase HPOKI128_03240 PF12804 MobA-like NTP transferase domain HPOKI128_03250 PF00813 FliP family HPOKI128_03260 PF02421 Ferrous iron transport protein B HPOKI128_03260 PF07664 Ferrous iron transport protein B C terminus HPOKI128_03260 PF07670 Nucleoside recognition HPOKI128_03270 PF01555 DNA methylase HPOKI128_03285 PF02803 Thiolase, C-terminal domain HPOKI128_03285 PF00108 Thiolase, N-terminal domain HPOKI128_03290 PF01144 Coenzyme A transferase HPOKI128_03295 PF01144 Coenzyme A transferase HPOKI128_03300 PF02667 Short chain fatty acid transporter HPOKI128_03310 PF01968 Hydantoinase/oxoprolinase HPOKI128_03310 PF05378 Hydantoinase/oxoprolinase N-terminal region HPOKI128_03315 PF02538 Hydantoinase B/oxoprolinase HPOKI128_03320 PF08882 Acetone carboxylase gamma subunit HPOKI128_03330 PF01219 Prokaryotic diacylglycerol kinase HPOKI128_03335 PF03989 DNA gyrase C-terminal domain, beta-propeller HPOKI128_03335 PF00521 DNA gyrase/topoisomerase IV, subunit A HPOKI128_03345 PF00072 Response regulator receiver domain HPOKI128_03345 PF02954 Bacterial regulatory protein, Fis family HPOKI128_03345 PF00158 Sigma-54 interaction domain HPOKI128_03350 PF17760 UvrA interaction domain HPOKI128_03350 PF17755 UvrA DNA-binding domain HPOKI128_03360 PF01795 MraW methylase family HPOKI128_03370 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HPOKI128_03395 PF04552 Sigma-54, DNA binding domain HPOKI128_03395 PF04963 Sigma-54 factor, core binding domain HPOKI128_03395 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPOKI128_03400 PF00005 ABC transporter HPOKI128_03410 PF12169 DNA polymerase III subunits gamma and tau domain III HPOKI128_03410 PF12170 DNA polymerase III tau subunit V interacting with alpha HPOKI128_03415 PF01810 LysE type translocator HPOKI128_03435 PF00710 Asparaginase, N-terminal HPOKI128_03435 PF17763 Glutaminase/Asparaginase C-terminal domain HPOKI128_03440 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPOKI128_03455 PF01207 Dihydrouridine synthase (Dus) HPOKI128_03460 PF01171 PP-loop family HPOKI128_03485 PF00919 Uncharacterized protein family UPF0004 HPOKI128_03485 PF04055 Radical SAM superfamily HPOKI128_03490 PF00156 Phosphoribosyl transferase domain HPOKI128_03495 PF00266 Aminotransferase class-V HPOKI128_03500 PF04608 Phosphatidylglycerophosphatase A HPOKI128_03515 PF02875 Mur ligase family, glutamate ligase domain HPOKI128_03515 PF08245 Mur ligase middle domain HPOKI128_03515 PF01225 Mur ligase family, catalytic domain HPOKI128_03520 PF01230 HIT domain HPOKI128_03525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPOKI128_03525 PF14572 Phosphoribosyl synthetase-associated domain HPOKI128_03545 PF00849 RNA pseudouridylate synthase HPOKI128_03545 PF01479 S4 domain HPOKI128_03555 PF02390 Putative methyltransferase HPOKI128_03580 PF07195 Flagellar hook-associated protein 2 C-terminus HPOKI128_03580 PF02465 Flagellar hook-associated protein 2 N-terminus HPOKI128_03585 PF02561 Flagellar protein FliS HPOKI128_03595 PF00899 ThiF family HPOKI128_03595 PF00581 Rhodanese-like domain HPOKI128_03605 PF00795 Carbon-nitrogen hydrolase HPOKI128_03615 PF03553 Na+/H+ antiporter family HPOKI128_03615 PF13726 Na+-H+ antiporter family HPOKI128_03620 PF01554 MatE HPOKI128_03625 PF12072 Domain of unknown function (DUF3552) HPOKI128_03625 PF00013 KH domain HPOKI128_03625 PF01966 HD domain HPOKI128_03640 PF00448 SRP54-type protein, GTPase domain HPOKI128_03665 PF06463 Molybdenum Cofactor Synthesis C HPOKI128_03665 PF04055 Radical SAM superfamily HPOKI128_03670 PF12804 MobA-like NTP transferase domain HPOKI128_03675 PF01312 FlhB HrpN YscU SpaS Family HPOKI128_03685 PF01520 N-acetylmuramoyl-L-alanine amidase HPOKI128_03690 PF00162 Phosphoglycerate kinase HPOKI128_03695 PF01479 S4 domain HPOKI128_03695 PF00579 tRNA synthetases class I (W and Y) HPOKI128_03700 PF04607 Region found in RelA / SpoT proteins HPOKI128_03700 PF02824 TGS domain HPOKI128_03700 PF13291 ACT domain HPOKI128_03705 PF01192 RNA polymerase Rpb6 HPOKI128_03710 PF00696 Amino acid kinase family HPOKI128_03720 PF06434 Aconitate hydratase 2 N-terminus HPOKI128_03720 PF11791 Aconitate B N-terminal domain HPOKI128_03720 PF00330 Aconitase family (aconitate hydratase) HPOKI128_03750 PF03548 Outer membrane lipoprotein carrier protein LolA HPOKI128_03755 PF01043 SecA preprotein cross-linking domain HPOKI128_03755 PF07516 SecA Wing and Scaffold domain HPOKI128_03755 PF07517 SecA DEAD-like domain HPOKI128_03755 PF02810 SEC-C motif HPOKI128_03775 PF01420 Type I restriction modification DNA specificity domain HPOKI128_03780 PF00403 Heavy-metal-associated domain HPOKI128_03785 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPOKI128_03785 PF01078 Magnesium chelatase, subunit ChlI HPOKI128_03790 PF01327 Polypeptide deformylase HPOKI128_03795 PF00574 Clp protease HPOKI128_03800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPOKI128_03800 PF05698 Bacterial trigger factor protein (TF) C-terminus HPOKI128_03800 PF05697 Bacterial trigger factor protein (TF) HPOKI128_03810 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) HPOKI128_03815 PF01967 MoaC family HPOKI128_03820 PF00994 Probable molybdopterin binding domain HPOKI128_03825 PF02391 MoaE protein HPOKI128_03835 PF00925 GTP cyclohydrolase II HPOKI128_03845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPOKI128_03845 PF00925 GTP cyclohydrolase II HPOKI128_03865 PF01648 4'-phosphopantetheinyl transferase superfamily HPOKI128_03870 PF03748 Flagellar basal body-associated protein FliL HPOKI128_03890 PF00753 Metallo-beta-lactamase superfamily HPOKI128_03895 PF00899 ThiF family HPOKI128_03900 PF01618 MotA/TolQ/ExbB proton channel family HPOKI128_03905 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPOKI128_03905 PF00691 OmpA family HPOKI128_03925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HPOKI128_03930 PF00571 CBS domain HPOKI128_03930 PF00005 ABC transporter HPOKI128_03945 PF01541 GIY-YIG catalytic domain HPOKI128_03945 PF02151 UvrB/uvrC motif HPOKI128_03945 PF08459 UvrC Helix-hairpin-helix N-terminal HPOKI128_03950 PF03447 Homoserine dehydrogenase, NAD binding domain HPOKI128_03950 PF00742 Homoserine dehydrogenase HPOKI128_03950 PF01842 ACT domain HPOKI128_03955 PF02021 Uncharacterised protein family UPF0102 HPOKI128_03960 PF00085 Thioredoxin HPOKI128_03965 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPOKI128_03975 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HPOKI128_03985 PF00119 ATP synthase A chain HPOKI128_03990 PF00571 CBS domain HPOKI128_03990 PF00478 IMP dehydrogenase / GMP reductase domain HPOKI128_03995 PF01425 Amidase HPOKI128_04000 PF01121 Dephospho-CoA kinase HPOKI128_04005 PF17284 Spermidine synthase tetramerisation domain HPOKI128_04015 PF01926 50S ribosome-binding GTPase HPOKI128_04015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPOKI128_04020 PF00216 Bacterial DNA-binding protein HPOKI128_04045 PF02719 Polysaccharide biosynthesis protein HPOKI128_04050 PF04127 DNA / pantothenate metabolism flavoprotein HPOKI128_04050 PF02441 Flavoprotein HPOKI128_04060 PF02581 Thiamine monophosphate synthase HPOKI128_04065 PF08543 Phosphomethylpyrimidine kinase HPOKI128_04070 PF02110 Hydroxyethylthiazole kinase family HPOKI128_04075 PF18766 SWI2/SNF2 ATPase HPOKI128_04075 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPOKI128_04075 PF12008 Type I restriction and modification enzyme - subunit R C terminal HPOKI128_04080 PF01420 Type I restriction modification DNA specificity domain HPOKI128_04085 PF02384 N-6 DNA Methylase HPOKI128_04085 PF12161 HsdM N-terminal domain HPOKI128_04090 PF01569 PAP2 superfamily HPOKI128_04100 PF12848 ABC transporter HPOKI128_04100 PF00005 ABC transporter HPOKI128_04105 PF00478 IMP dehydrogenase / GMP reductase domain HPOKI128_04110 PF13580 SIS domain HPOKI128_04115 PF01467 Cytidylyltransferase-like HPOKI128_04115 PF00294 pfkB family carbohydrate kinase HPOKI128_04120 PF01370 NAD dependent epimerase/dehydratase family HPOKI128_04135 PF03309 Type III pantothenate kinase HPOKI128_04140 PF15437 Plasminogen-binding protein pgbA C-terminal HPOKI128_04150 PF00692 dUTPase HPOKI128_04155 PF01272 Transcription elongation factor, GreA/GreB, C-term HPOKI128_04155 PF03449 Transcription elongation factor, N-terminal HPOKI128_04160 PF02684 Lipid-A-disaccharide synthetase HPOKI128_04170 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HPOKI128_04175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPOKI128_04175 PF00460 Flagella basal body rod protein HPOKI128_04175 PF07196 Flagellin hook IN motif HPOKI128_04175 PF07559 Flagellar basal body protein FlaE HPOKI128_04180 PF02611 CDP-diacylglycerol pyrophosphatase HPOKI128_04200 PF00199 Catalase HPOKI128_04200 PF06628 Catalase-related immune-responsive HPOKI128_04205 PF00593 TonB dependent receptor HPOKI128_04205 PF07715 TonB-dependent Receptor Plug Domain HPOKI128_04210 PF02075 Crossover junction endodeoxyribonuclease RuvC HPOKI128_04225 PF01330 RuvA N terminal domain HPOKI128_04225 PF07499 RuvA, C-terminal domain HPOKI128_04235 PF03023 Lipid II flippase MurJ HPOKI128_04240 PF09190 DALR domain HPOKI128_04240 PF01406 tRNA synthetases class I (C) catalytic domain HPOKI128_04245 PF03797 Autotransporter beta-domain HPOKI128_04245 PF02691 Vacuolating cyotoxin HPOKI128_04250 PF00005 ABC transporter HPOKI128_04255 PF01032 FecCD transport family HPOKI128_04260 PF00106 short chain dehydrogenase HPOKI128_04265 PF03061 Thioesterase superfamily HPOKI128_04270 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPOKI128_04310 PF01924 Hydrogenase formation hypA family HPOKI128_04315 PF01455 HupF/HypC family HPOKI128_04320 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPOKI128_04335 PF00871 Acetokinase family HPOKI128_04340 PF01515 Phosphate acetyl/butaryl transferase HPOKI128_04350 PF13861 FlgD Tudor-like domain HPOKI128_04350 PF13860 FlgD Ig-like domain HPOKI128_04350 PF03963 Flagellar hook capping protein - N-terminal region HPOKI128_04355 PF07559 Flagellar basal body protein FlaE HPOKI128_04355 PF00460 Flagella basal body rod protein HPOKI128_04355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPOKI128_04355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPOKI128_04355 PF00460 Flagella basal body rod protein HPOKI128_04355 PF07559 Flagellar basal body protein FlaE HPOKI128_04365 PF02384 N-6 DNA Methylase HPOKI128_04365 PF07669 Eco57I restriction-modification methylase HPOKI128_04370 PF00580 UvrD/REP helicase N-terminal domain HPOKI128_04370 PF13361 UvrD-like helicase C-terminal domain HPOKI128_04400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPOKI128_04400 PF02142 MGS-like domain HPOKI128_04400 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPOKI128_04405 PF01027 Inhibitor of apoptosis-promoting Bax1 HPOKI128_04410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPOKI128_04410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPOKI128_04415 PF03797 Autotransporter beta-domain HPOKI128_04415 PF02691 Vacuolating cyotoxin HPOKI128_04425 PF01361 Tautomerase enzyme HPOKI128_04430 PF02132 RecR protein HPOKI128_04435 PF01142 tRNA pseudouridine synthase D (TruD) HPOKI128_04440 PF01435 Peptidase family M48 HPOKI128_04445 PF01227 GTP cyclohydrolase I HPOKI128_04450 PF00348 Polyprenyl synthetase HPOKI128_04455 PF01975 Survival protein SurE HPOKI128_04465 PF01242 6-pyruvoyl tetrahydropterin synthase HPOKI128_04485 PF08946 Osmosensory transporter coiled coil HPOKI128_04485 PF00083 Sugar (and other) transporter HPOKI128_04495 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_04500 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPOKI128_04505 PF01168 Alanine racemase, N-terminal domain HPOKI128_04505 PF00842 Alanine racemase, C-terminal domain HPOKI128_04510 PF01235 Sodium:alanine symporter family HPOKI128_04515 PF01266 FAD dependent oxidoreductase HPOKI128_04520 PF01042 Endoribonuclease L-PSP HPOKI128_04545 PF03553 Na+/H+ antiporter family HPOKI128_04565 PF02590 Predicted SPOUT methyltransferase HPOKI128_04570 PF01039 Carboxyl transferase domain HPOKI128_04570 PF17848 Acetyl-coA carboxylase zinc finger domain HPOKI128_04580 PF00994 Probable molybdopterin binding domain HPOKI128_04580 PF02464 Competence-damaged protein HPOKI128_04580 PF18146 Damage-inducible protein CinA KH domain HPOKI128_04590 PF00881 Nitroreductase family HPOKI128_04595 PF01790 Prolipoprotein diacylglyceryl transferase HPOKI128_04600 PF00849 RNA pseudouridylate synthase HPOKI128_04605 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPOKI128_04605 PF02390 Putative methyltransferase HPOKI128_04615 PF01784 NIF3 (NGG1p interacting factor 3) HPOKI128_04620 PF02091 Glycyl-tRNA synthetase alpha subunit HPOKI128_04625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPOKI128_04625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPOKI128_04630 PF00350 Dynamin family HPOKI128_04650 PF00873 AcrB/AcrD/AcrF family HPOKI128_04665 PF02092 Glycyl-tRNA synthetase beta subunit HPOKI128_04675 PF01676 Metalloenzyme superfamily HPOKI128_04675 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPOKI128_04680 PF02686 Glu-tRNAGln amidotransferase C subunit HPOKI128_04685 PF00202 Aminotransferase class-III HPOKI128_04695 PF02491 SHS2 domain inserted in FTSA HPOKI128_04700 PF12327 FtsZ family, C-terminal domain HPOKI128_04700 PF00091 Tubulin/FtsZ family, GTPase domain HPOKI128_04730 PF02163 Peptidase family M50 HPOKI128_04825 PF17810 Arginine decarboxylase helical bundle domain HPOKI128_04825 PF17944 Arginine decarboxylase C-terminal helical extension HPOKI128_04825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPOKI128_04840 PF08003 Protein of unknown function (DUF1698) HPOKI128_04850 PF01588 Putative tRNA binding domain HPOKI128_04850 PF09334 tRNA synthetases class I (M) HPOKI128_04850 PF00133 tRNA synthetases class I (I, L, M and V) HPOKI128_04860 PF00924 Mechanosensitive ion channel HPOKI128_04905 PF00958 GMP synthase C terminal domain HPOKI128_04905 PF00117 Glutamine amidotransferase class-I HPOKI128_04905 PF02540 NAD synthase HPOKI128_04915 PF00384 Molybdopterin oxidoreductase HPOKI128_04915 PF18364 Molybdopterin oxidoreductase N-terminal domain HPOKI128_04915 PF01568 Molydopterin dinucleotide binding domain HPOKI128_04925 PF02347 Glycine cleavage system P-protein HPOKI128_04930 PF01230 HIT domain HPOKI128_04940 PF01409 tRNA synthetases class II core domain (F) HPOKI128_04940 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPOKI128_04945 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPOKI128_04945 PF01588 Putative tRNA binding domain HPOKI128_04945 PF03484 tRNA synthetase B5 domain HPOKI128_04945 PF03147 Ferredoxin-fold anticodon binding domain HPOKI128_04950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPOKI128_04955 PF02401 LytB protein HPOKI128_04960 PF00575 S1 RNA binding domain HPOKI128_04970 PF01842 ACT domain HPOKI128_04970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPOKI128_04970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPOKI128_04975 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPOKI128_04980 PF01168 Alanine racemase, N-terminal domain HPOKI128_04990 PF01584 CheW-like domain HPOKI128_04990 PF00072 Response regulator receiver domain HPOKI128_04995 PF07194 P2 response regulator binding domain HPOKI128_04995 PF01627 Hpt domain HPOKI128_04995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPOKI128_04995 PF01584 CheW-like domain HPOKI128_04995 PF02895 Signal transducing histidine kinase, homodimeric domain HPOKI128_05005 PF08534 Redoxin HPOKI128_05010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPOKI128_05010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPOKI128_05015 PF13649 Methyltransferase domain HPOKI128_05020 PF17764 3′ DNA-binding domain (3′BD) HPOKI128_05020 PF00270 DEAD/DEAH box helicase HPOKI128_05020 PF00271 Helicase conserved C-terminal domain HPOKI128_05020 PF18074 Primosomal protein N C-terminal domain HPOKI128_05020 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPOKI128_05050 PF17827 PrmC N-terminal domain HPOKI128_05050 PF05175 Methyltransferase small domain HPOKI128_05055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HPOKI128_05055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HPOKI128_05060 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain HPOKI128_05060 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term HPOKI128_05065 PF05140 ResB-like family HPOKI128_05065 PF01578 Cytochrome C assembly protein HPOKI128_05075 PF00762 Ferrochelatase HPOKI128_05085 PF04452 RNA methyltransferase HPOKI128_05095 PF00692 dUTPase HPOKI128_05100 PF00364 Biotin-requiring enzyme HPOKI128_05105 PF00289 Biotin carboxylase, N-terminal domain HPOKI128_05105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPOKI128_05105 PF02785 Biotin carboxylase C-terminal domain HPOKI128_05125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPOKI128_05135 PF00268 Ribonucleotide reductase, small chain HPOKI128_05150 PF01416 tRNA pseudouridine synthase HPOKI128_05155 PF01370 NAD dependent epimerase/dehydratase family HPOKI128_05175 PF08238 Sel1 repeat HPOKI128_05180 PF01081 KDPG and KHG aldolase HPOKI128_05185 PF00920 Dehydratase family HPOKI128_05190 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HPOKI128_05190 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HPOKI128_05195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPOKI128_05200 PF02685 Glucokinase HPOKI128_05205 PF00107 Zinc-binding dehydrogenase HPOKI128_05205 PF08240 Alcohol dehydrogenase GroES-like domain HPOKI128_05235 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPOKI128_05245 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPOKI128_05245 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPOKI128_05250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPOKI128_05255 PF00206 Lyase HPOKI128_05255 PF10397 Adenylosuccinate lyase C-terminus HPOKI128_05265 PF00271 Helicase conserved C-terminal domain HPOKI128_05265 PF04851 Type III restriction enzyme, res subunit HPOKI128_05265 PF17757 UvrB interaction domain HPOKI128_05265 PF12344 Ultra-violet resistance protein B HPOKI128_05265 PF02151 UvrB/uvrC motif HPOKI128_05290 PF00460 Flagella basal body rod protein HPOKI128_05290 PF07559 Flagellar basal body protein FlaE HPOKI128_05290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPOKI128_05300 PF00145 C-5 cytosine-specific DNA methylase HPOKI128_05315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPOKI128_05325 PF00691 OmpA family HPOKI128_05330 PF07676 WD40-like Beta Propeller Repeat HPOKI128_05340 PF02472 Biopolymer transport protein ExbD/TolR HPOKI128_05345 PF01618 MotA/TolQ/ExbB proton channel family HPOKI128_05350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPOKI128_05355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPOKI128_05355 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPOKI128_05360 PF00231 ATP synthase HPOKI128_05365 PF00306 ATP synthase alpha/beta chain, C terminal domain HPOKI128_05365 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPOKI128_05365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPOKI128_05375 PF00430 ATP synthase B/B' CF(0) HPOKI128_05385 PF02195 ParB-like nuclease domain HPOKI128_05385 PF17762 HTH domain found in ParB protein HPOKI128_05390 PF13614 AAA domain HPOKI128_05395 PF02237 Biotin protein ligase C terminal domain HPOKI128_05395 PF08279 HTH domain HPOKI128_05395 PF03099 Biotin/lipoate A/B protein ligase family HPOKI128_05400 PF00551 Formyl transferase HPOKI128_05400 PF02911 Formyl transferase, C-terminal domain HPOKI128_05440 PF01245 Ribosomal protein L19 HPOKI128_05445 PF01746 tRNA (Guanine-1)-methyltransferase HPOKI128_05450 PF05239 PRC-barrel domain HPOKI128_05450 PF01782 RimM N-terminal domain HPOKI128_05460 PF00886 Ribosomal protein S16 HPOKI128_05465 PF00448 SRP54-type protein, GTPase domain HPOKI128_05465 PF02881 SRP54-type protein, helical bundle domain HPOKI128_05465 PF02978 Signal peptide binding domain HPOKI128_05470 PF00133 tRNA synthetases class I (I, L, M and V) HPOKI128_05470 PF08264 Anticodon-binding domain of tRNA HPOKI128_05470 PF10458 Valyl tRNA synthetase tRNA binding arm HPOKI128_05475 PF02623 FliW protein HPOKI128_05480 PF04101 Glycosyltransferase family 28 C-terminal domain HPOKI128_05480 PF03033 Glycosyltransferase family 28 N-terminal domain HPOKI128_05495 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPOKI128_05495 PF03807 NADP oxidoreductase coenzyme F420-dependent HPOKI128_05500 PF02661 Fic/DOC family HPOKI128_05505 PF02130 Uncharacterized protein family UPF0054 HPOKI128_05510 PF00258 Flavodoxin HPOKI128_05525 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPOKI128_05540 PF00342 Phosphoglucose isomerase HPOKI128_05560 PF02554 Carbon starvation protein CstA HPOKI128_05560 PF13722 5TM C-terminal transporter carbon starvation CstA HPOKI128_05565 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_05570 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_05575 PF00005 ABC transporter HPOKI128_05595 PF00860 Permease family HPOKI128_05625 PF01048 Phosphorylase superfamily HPOKI128_05630 PF01676 Metalloenzyme superfamily HPOKI128_05635 PF07662 Na+ dependent nucleoside transporter C-terminus HPOKI128_05635 PF01773 Na+ dependent nucleoside transporter N-terminus HPOKI128_05645 PF07690 Major Facilitator Superfamily HPOKI128_05650 PF01171 PP-loop family HPOKI128_05655 PF02080 TrkA-C domain HPOKI128_05655 PF02254 TrkA-N domain HPOKI128_05655 PF00999 Sodium/hydrogen exchanger family HPOKI128_05665 PF07690 Major Facilitator Superfamily HPOKI128_05675 PF00194 Eukaryotic-type carbonic anhydrase HPOKI128_05685 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPOKI128_05685 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPOKI128_05690 PF03129 Anticodon binding domain HPOKI128_05690 PF13393 Histidyl-tRNA synthetase HPOKI128_05695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPOKI128_05710 PF00009 Elongation factor Tu GTP binding domain HPOKI128_05710 PF03144 Elongation factor Tu domain 2 HPOKI128_05710 PF00679 Elongation factor G C-terminus HPOKI128_05710 PF14492 Elongation Factor G, domain II HPOKI128_05710 PF03764 Elongation factor G, domain IV HPOKI128_05715 PF00177 Ribosomal protein S7p/S5e HPOKI128_05720 PF00164 Ribosomal protein S12/S23 HPOKI128_05725 PF00623 RNA polymerase Rpb1, domain 2 HPOKI128_05725 PF04983 RNA polymerase Rpb1, domain 3 HPOKI128_05725 PF05000 RNA polymerase Rpb1, domain 4 HPOKI128_05725 PF04998 RNA polymerase Rpb1, domain 5 HPOKI128_05725 PF00562 RNA polymerase Rpb2, domain 6 HPOKI128_05725 PF10385 RNA polymerase beta subunit external 1 domain HPOKI128_05725 PF04997 RNA polymerase Rpb1, domain 1 HPOKI128_05725 PF04563 RNA polymerase beta subunit HPOKI128_05725 PF04561 RNA polymerase Rpb2, domain 2 HPOKI128_05725 PF04565 RNA polymerase Rpb2, domain 3 HPOKI128_05725 PF04560 RNA polymerase Rpb2, domain 7 HPOKI128_05735 PF00542 Ribosomal protein L7/L12 C-terminal domain HPOKI128_05735 PF16320 Ribosomal protein L7/L12 dimerisation domain HPOKI128_05740 PF00466 Ribosomal protein L10 HPOKI128_05745 PF00687 Ribosomal protein L1p/L10e family HPOKI128_05750 PF00298 Ribosomal protein L11, RNA binding domain HPOKI128_05750 PF03946 Ribosomal protein L11, N-terminal domain HPOKI128_05755 PF02357 Transcription termination factor nusG HPOKI128_05770 PF00471 Ribosomal protein L33 HPOKI128_05775 PF03143 Elongation factor Tu C-terminal domain HPOKI128_05775 PF03144 Elongation factor Tu domain 2 HPOKI128_05775 PF00009 Elongation factor Tu GTP binding domain HPOKI128_05800 PF00664 ABC transporter transmembrane region HPOKI128_05800 PF00005 ABC transporter HPOKI128_05810 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPOKI128_05815 PF00132 Bacterial transferase hexapeptide (six repeats) HPOKI128_05830 PF00137 ATP synthase subunit C HPOKI128_05835 PF00575 S1 RNA binding domain HPOKI128_05835 PF03725 3' exoribonuclease family, domain 2 HPOKI128_05835 PF01138 3' exoribonuclease family, domain 1 HPOKI128_05835 PF00013 KH domain HPOKI128_05845 PF04453 LPS transport system D HPOKI128_05845 PF03968 OstA-like protein HPOKI128_05855 PF02844 Phosphoribosylglycinamide synthetase, N domain HPOKI128_05855 PF02843 Phosphoribosylglycinamide synthetase, C domain HPOKI128_05855 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPOKI128_05860 PF00005 ABC transporter HPOKI128_05865 PF01255 Putative undecaprenyl diphosphate synthase HPOKI128_05885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPOKI128_05890 PF04055 Radical SAM superfamily HPOKI128_05895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPOKI128_05900 PF00293 NUDIX domain HPOKI128_05905 PF01842 ACT domain HPOKI128_05905 PF13840 ACT domain HPOKI128_05905 PF00696 Amino acid kinase family HPOKI128_05915 PF12169 DNA polymerase III subunits gamma and tau domain III HPOKI128_05920 PF00809 Pterin binding enzyme HPOKI128_05930 PF00892 EamA-like transporter family HPOKI128_05950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPOKI128_05950 PF00117 Glutamine amidotransferase class-I HPOKI128_05955 PF00795 Carbon-nitrogen hydrolase HPOKI128_05960 PF00149 Calcineurin-like phosphoesterase HPOKI128_05960 PF02872 5'-nucleotidase, C-terminal domain HPOKI128_05970 PF02545 Maf-like protein HPOKI128_05975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPOKI128_05975 PF02272 DHHA1 domain HPOKI128_05975 PF01411 tRNA synthetases class II (A) HPOKI128_06000 PF00118 TCP-1/cpn60 chaperonin family HPOKI128_06005 PF00166 Chaperonin 10 Kd subunit HPOKI128_06010 PF13662 Toprim domain HPOKI128_06010 PF16730 DnaG-primase C-terminal, helicase-binding domain HPOKI128_06010 PF01807 CHC2 zinc finger HPOKI128_06010 PF08275 DNA primase catalytic core, N-terminal domain HPOKI128_06045 PF00072 Response regulator receiver domain HPOKI128_06050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPOKI128_06055 PF01569 PAP2 superfamily HPOKI128_06060 PF08019 Phosphoethanolamine transferase EptA/EptB HPOKI128_06060 PF00884 Sulfatase HPOKI128_06085 PF00285 Citrate synthase, C-terminal domain HPOKI128_06090 PF00180 Isocitrate/isopropylmalate dehydrogenase HPOKI128_06095 PF07509 Protein of unknown function (DUF1523) HPOKI128_06110 PF00582 Universal stress protein family HPOKI128_06115 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPOKI128_06120 PF07724 AAA domain (Cdc48 subfamily) HPOKI128_06120 PF17871 AAA lid domain HPOKI128_06120 PF10431 C-terminal, D2-small domain, of ClpB protein HPOKI128_06120 PF00004 ATPase family associated with various cellular activities (AAA) HPOKI128_06120 PF02861 Clp amino terminal domain, pathogenicity island component HPOKI128_06125 PF02261 Aspartate decarboxylase HPOKI128_06130 PF02575 YbaB/EbfC DNA-binding family HPOKI128_06170 PF16363 GDP-mannose 4,6 dehydratase HPOKI128_06175 PF01370 NAD dependent epimerase/dehydratase family HPOKI128_06185 PF02769 AIR synthase related protein, C-terminal domain HPOKI128_06185 PF00586 AIR synthase related protein, N-terminal domain HPOKI128_06190 PF00708 Acylphosphatase HPOKI128_06190 PF01300 Telomere recombination HPOKI128_06190 PF17788 HypF Kae1-like domain HPOKI128_06190 PF07503 HypF finger HPOKI128_06195 PF04371 Porphyromonas-type peptidyl-arginine deiminase HPOKI128_06200 PF01555 DNA methylase HPOKI128_06205 PF00145 C-5 cytosine-specific DNA methylase HPOKI128_06220 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPOKI128_06225 PF00834 Ribulose-phosphate 3 epimerase family HPOKI128_06230 PF00929 Exonuclease HPOKI128_06230 PF14579 Helix-hairpin-helix motif HPOKI128_06230 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPOKI128_06230 PF02811 PHP domain HPOKI128_06230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPOKI128_06250 PF02463 RecF/RecN/SMC N terminal domain HPOKI128_06255 PF01513 ATP-NAD kinase HPOKI128_06275 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPOKI128_06275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPOKI128_06280 PF00491 Arginase family HPOKI128_06290 PF07660 Secretin and TonB N terminus short domain HPOKI128_06290 PF07715 TonB-dependent Receptor Plug Domain HPOKI128_06290 PF00593 TonB dependent receptor HPOKI128_06300 PF11867 Domain of unknown function (DUF3387) HPOKI128_06300 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPOKI128_06300 PF18766 SWI2/SNF2 ATPase HPOKI128_06310 PF01420 Type I restriction modification DNA specificity domain HPOKI128_06320 PF02511 Thymidylate synthase complementing protein HPOKI128_06325 PF01380 SIS domain HPOKI128_06330 PF10398 Protein of unknown function (DUF2443) HPOKI128_06340 PF08299 Bacterial dnaA protein helix-turn-helix HPOKI128_06340 PF00308 Bacterial dnaA protein HPOKI128_06355 PF03372 Endonuclease/Exonuclease/phosphatase family HPOKI128_06370 PF04851 Type III restriction enzyme, res subunit HPOKI128_06370 PF00271 Helicase conserved C-terminal domain HPOKI128_06380 PF08774 VRR-NUC domain HPOKI128_06380 PF04851 Type III restriction enzyme, res subunit HPOKI128_06405 PF13274 Protein of unknown function (DUF4065) HPOKI128_06415 PF08529 NusA N-terminal domain HPOKI128_06415 PF13184 NusA-like KH domain HPOKI128_06420 PF03841 L-seryl-tRNA selenium transferase HPOKI128_06440 PF02660 Glycerol-3-phosphate acyltransferase HPOKI128_06445 PF13746 4Fe-4S dicluster domain HPOKI128_06445 PF12801 4Fe-4S binding domain HPOKI128_06445 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPOKI128_06450 PF03435 Saccharopine dehydrogenase NADP binding domain HPOKI128_06450 PF16653 Saccharopine dehydrogenase C-terminal domain HPOKI128_06455 PF03616 Sodium/glutamate symporter HPOKI128_06460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPOKI128_06460 PF01872 RibD C-terminal domain HPOKI128_06465 PF05175 Methyltransferase small domain HPOKI128_06500 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPOKI128_06510 PF01195 Peptidyl-tRNA hydrolase HPOKI128_06515 PF14693 Ribosomal protein TL5, C-terminal domain HPOKI128_06515 PF01386 Ribosomal L25p family HPOKI128_06520 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPOKI128_06525 PF02875 Mur ligase family, glutamate ligase domain HPOKI128_06525 PF08245 Mur ligase middle domain HPOKI128_06535 PF01106 NifU-like domain HPOKI128_06540 PF01384 Phosphate transporter family HPOKI128_06545 PF00571 CBS domain HPOKI128_06545 PF01595 Cyclin M transmembrane N-terminal domain HPOKI128_06545 PF03471 Transporter associated domain HPOKI128_06555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPOKI128_06570 PF01205 Uncharacterized protein family UPF0029 HPOKI128_06570 PF09186 Domain of unknown function (DUF1949) HPOKI128_06580 PF01209 ubiE/COQ5 methyltransferase family HPOKI128_06585 PF02609 Exonuclease VII small subunit HPOKI128_06595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPOKI128_06595 PF02403 Seryl-tRNA synthetase N-terminal domain HPOKI128_06605 PF00580 UvrD/REP helicase N-terminal domain HPOKI128_06605 PF13361 UvrD-like helicase C-terminal domain HPOKI128_06615 PF02441 Flavoprotein HPOKI128_06620 PF01467 Cytidylyltransferase-like HPOKI128_06625 PF02223 Thymidylate kinase HPOKI128_06640 PF01367 5'-3' exonuclease, C-terminal SAM fold HPOKI128_06640 PF00476 DNA polymerase family A HPOKI128_06640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPOKI128_06650 PF01063 Amino-transferase class IV HPOKI128_06660 PF02405 Permease MlaE HPOKI128_06665 PF00005 ABC transporter HPOKI128_06665 PF09383 NIL domain HPOKI128_06690 PF00034 Cytochrome c HPOKI128_06690 PF03150 Di-haem cytochrome c peroxidase HPOKI128_06695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPOKI128_06695 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPOKI128_06695 PF02811 PHP domain HPOKI128_06695 PF14579 Helix-hairpin-helix motif HPOKI128_06700 PF00849 RNA pseudouridylate synthase HPOKI128_06700 PF01479 S4 domain HPOKI128_06705 PF00085 Thioredoxin HPOKI128_06715 PF02169 LPP20 lipoprotein HPOKI128_06740 PF10396 GTP-binding protein TrmE N-terminus HPOKI128_06740 PF01926 50S ribosome-binding GTPase HPOKI128_06740 PF12631 MnmE helical domain HPOKI128_06750 PF02096 60Kd inner membrane protein HPOKI128_06750 PF14849 YidC periplasmic domain HPOKI128_06755 PF01809 Putative membrane protein insertion efficiency factor HPOKI128_06760 PF00825 Ribonuclease P HPOKI128_06765 PF02472 Biopolymer transport protein ExbD/TolR HPOKI128_06770 PF01618 MotA/TolQ/ExbB proton channel family HPOKI128_06775 PF01668 SmpB protein HPOKI128_06780 PF00288 GHMP kinases N terminal domain HPOKI128_06785 PF02599 Global regulator protein family HPOKI128_06790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPOKI128_06840 PF01343 Peptidase family S49 HPOKI128_06845 PF00551 Formyl transferase HPOKI128_06845 PF01842 ACT domain HPOKI128_06865 PF00398 Ribosomal RNA adenine dimethylase HPOKI128_06870 PF00753 Metallo-beta-lactamase superfamily HPOKI128_06870 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPOKI128_06870 PF17770 Ribonuclease J C-terminal domain HPOKI128_06875 PF01380 SIS domain HPOKI128_06875 PF00571 CBS domain HPOKI128_06880 PF04055 Radical SAM superfamily HPOKI128_06900 PF01479 S4 domain HPOKI128_06905 PF00133 tRNA synthetases class I (I, L, M and V) HPOKI128_06905 PF08264 Anticodon-binding domain of tRNA HPOKI128_06910 PF00437 Type II/IV secretion system protein HPOKI128_06915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPOKI128_06915 PF18269 T3SS EscN ATPase C-terminal domain HPOKI128_06920 PF01313 Bacterial export proteins, family 3 HPOKI128_06925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPOKI128_06935 PF13651 Adenine-specific methyltransferase EcoRI HPOKI128_06955 PF14489 QueF-like protein HPOKI128_06990 PF03631 Virulence factor BrkB HPOKI128_06995 PF06968 Biotin and Thiamin Synthesis associated domain HPOKI128_06995 PF04055 Radical SAM superfamily HPOKI128_07005 PF04851 Type III restriction enzyme, res subunit HPOKI128_07010 PF01555 DNA methylase HPOKI128_07020 PF01842 ACT domain HPOKI128_07020 PF02153 Prephenate dehydrogenase HPOKI128_07025 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPOKI128_07025 PF00004 ATPase family associated with various cellular activities (AAA) HPOKI128_07025 PF05362 Lon protease (S16) C-terminal proteolytic domain HPOKI128_07030 PF13525 Outer membrane lipoprotein HPOKI128_07040 PF02623 FliW protein HPOKI128_07045 PF07977 FabA-like domain HPOKI128_07050 PF00132 Bacterial transferase hexapeptide (six repeats) HPOKI128_07050 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPOKI128_07055 PF07724 AAA domain (Cdc48 subfamily) HPOKI128_07055 PF10431 C-terminal, D2-small domain, of ClpB protein HPOKI128_07075 PF00072 Response regulator receiver domain HPOKI128_07075 PF00486 Transcriptional regulatory protein, C terminal HPOKI128_07085 PF03853 YjeF-related protein N-terminus HPOKI128_07085 PF01256 Carbohydrate kinase HPOKI128_07090 PF03796 DnaB-like helicase C terminal domain HPOKI128_07090 PF00772 DnaB-like helicase N terminal domain HPOKI128_07100 PF01040 UbiA prenyltransferase family HPOKI128_07115 PF02666 Phosphatidylserine decarboxylase HPOKI128_07120 PF02445 Quinolinate synthetase A protein HPOKI128_07125 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPOKI128_07125 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPOKI128_07135 PF18755 Restriction Enzyme Adenine Methylase Associated HPOKI128_07135 PF01555 DNA methylase HPOKI128_07145 PF13180 PDZ domain HPOKI128_07145 PF03572 Peptidase family S41 HPOKI128_07155 PF01553 Acyltransferase HPOKI128_07160 PF03167 Uracil DNA glycosylase superfamily HPOKI128_07165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPOKI128_07165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPOKI128_07170 PF00162 Phosphoglycerate kinase HPOKI128_07175 PF01544 CorA-like Mg2+ transporter protein HPOKI128_07180 PF03741 Integral membrane protein TerC family HPOKI128_07195 PF03544 Gram-negative bacterial TonB protein C-terminal HPOKI128_07200 PF02472 Biopolymer transport protein ExbD/TolR HPOKI128_07205 PF01618 MotA/TolQ/ExbB proton channel family HPOKI128_07210 PF08753 NikR C terminal nickel binding domain HPOKI128_07210 PF01402 Ribbon-helix-helix protein, copG family HPOKI128_07215 PF01467 Cytidylyltransferase-like HPOKI128_07235 PF00684 DnaJ central domain HPOKI128_07235 PF00226 DnaJ domain HPOKI128_07235 PF01556 DnaJ C terminal domain HPOKI128_07240 PF03591 AzlC protein HPOKI128_07245 PF05437 Branched-chain amino acid transport protein (AzlD) HPOKI128_07250 PF00873 AcrB/AcrD/AcrF family HPOKI128_07255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPOKI128_07255 PF00529 HlyD membrane-fusion protein of T1SS HPOKI128_07270 PF10415 Fumarase C C-terminus HPOKI128_07270 PF00206 Lyase HPOKI128_07285 PF01351 Ribonuclease HII HPOKI128_07300 PF00338 Ribosomal protein S10p/S20e HPOKI128_07305 PF00297 Ribosomal protein L3 HPOKI128_07310 PF00573 Ribosomal protein L4/L1 family HPOKI128_07315 PF00276 Ribosomal protein L23 HPOKI128_07320 PF00181 Ribosomal Proteins L2, RNA binding domain HPOKI128_07320 PF03947 Ribosomal Proteins L2, C-terminal domain HPOKI128_07325 PF00203 Ribosomal protein S19 HPOKI128_07330 PF00237 Ribosomal protein L22p/L17e HPOKI128_07335 PF07650 KH domain HPOKI128_07335 PF00189 Ribosomal protein S3, C-terminal domain HPOKI128_07340 PF00252 Ribosomal protein L16p/L10e HPOKI128_07345 PF00831 Ribosomal L29 protein HPOKI128_07350 PF00366 Ribosomal protein S17 HPOKI128_07355 PF00238 Ribosomal protein L14p/L23e HPOKI128_07360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPOKI128_07360 PF00467 KOW motif HPOKI128_07365 PF00673 ribosomal L5P family C-terminus HPOKI128_07365 PF00281 Ribosomal protein L5 HPOKI128_07370 PF00253 Ribosomal protein S14p/S29e HPOKI128_07375 PF00410 Ribosomal protein S8 HPOKI128_07380 PF00347 Ribosomal protein L6 HPOKI128_07385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPOKI128_07390 PF03719 Ribosomal protein S5, C-terminal domain HPOKI128_07390 PF00333 Ribosomal protein S5, N-terminal domain HPOKI128_07395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPOKI128_07400 PF00344 SecY translocase HPOKI128_07405 PF00557 Metallopeptidase family M24 HPOKI128_07410 PF01176 Translation initiation factor 1A / IF-1 HPOKI128_07415 PF00444 Ribosomal protein L36 HPOKI128_07420 PF00416 Ribosomal protein S13/S18 HPOKI128_07425 PF00411 Ribosomal protein S11 HPOKI128_07430 PF00163 Ribosomal protein S4/S9 N-terminal domain HPOKI128_07430 PF01479 S4 domain HPOKI128_07435 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPOKI128_07435 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPOKI128_07435 PF01000 RNA polymerase Rpb3/RpoA insert domain HPOKI128_07440 PF01196 Ribosomal protein L17 HPOKI128_07455 PF04973 Nicotinamide mononucleotide transporter HPOKI128_07460 PF03070 TENA/THI-4/PQQC family HPOKI128_07480 PF01797 Transposase IS200 like HPOKI128_07490 PF04264 YceI-like domain HPOKI128_07500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPOKI128_07505 PF04715 Anthranilate synthase component I, N terminal region HPOKI128_07505 PF00425 chorismate binding enzyme HPOKI128_07510 PF00117 Glutamine amidotransferase class-I HPOKI128_07515 PF00591 Glycosyl transferase family, a/b domain HPOKI128_07515 PF02885 Glycosyl transferase family, helical bundle domain HPOKI128_07520 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPOKI128_07520 PF00218 Indole-3-glycerol phosphate synthase HPOKI128_07525 PF00291 Pyridoxal-phosphate dependent enzyme HPOKI128_07530 PF00290 Tryptophan synthase alpha chain HPOKI128_07540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPOKI128_07540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPOKI128_07540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPOKI128_07540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPOKI128_07550 PF00361 Proton-conducting membrane transporter HPOKI128_07555 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HPOKI128_07555 PF00361 Proton-conducting membrane transporter HPOKI128_07560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPOKI128_07560 PF00361 Proton-conducting membrane transporter HPOKI128_07565 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HPOKI128_07570 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HPOKI128_07575 PF12838 4Fe-4S dicluster domain HPOKI128_07580 PF00146 NADH dehydrogenase HPOKI128_07585 PF12838 4Fe-4S dicluster domain HPOKI128_07585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPOKI128_07585 PF01568 Molydopterin dinucleotide binding domain HPOKI128_07585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HPOKI128_07585 PF00384 Molybdopterin oxidoreductase HPOKI128_07600 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HPOKI128_07605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HPOKI128_07610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HPOKI128_07615 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HPOKI128_07620 PF02146 Sir2 family HPOKI128_07630 PF00156 Phosphoribosyl transferase domain HPOKI128_07635 PF01765 Ribosome recycling factor HPOKI128_07640 PF03840 Preprotein translocase SecG subunit HPOKI128_07650 PF00579 tRNA synthetases class I (W and Y) HPOKI128_07655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPOKI128_07660 PF00528 Binding-protein-dependent transport system inner membrane component HPOKI128_07670 PF08501 Shikimate dehydrogenase substrate binding domain HPOKI128_07675 PF00773 RNB domain HPOKI128_07680 PF06144 DNA polymerase III, delta subunit HPOKI128_07690 PF01250 Ribosomal protein S6 HPOKI128_07695 PF00436 Single-strand binding protein family HPOKI128_07700 PF01084 Ribosomal protein S18 HPOKI128_07740 PF02569 Pantoate-beta-alanine ligase HPOKI128_07745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPOKI128_07750 PF00484 Carbonic anhydrase HPOKI128_07755 PF00793 DAHP synthetase I family HPOKI128_07760 PF00885 6,7-dimethyl-8-ribityllumazine synthase