locus-tag	class	description
C798_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
C798_00010	COG0592	DNA-directed DNA polymerase activity
C798_00105	COG3550	peptidyl-serine autophosphorylation
C798_00165	COG2885	chlorophyll binding
C798_00210	COG2733	membrane
C798_00215	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C798_00220	COG3501	Rhs element vgr protein
C798_00245	COG0840	transmembrane signaling receptor activity
C798_00250	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_00255	COG2818	Glycosylase
C798_00270	COG0443	Heat shock 70 kDa protein
C798_00280	COG3541	Predicted nucleotidyltransferase
C798_00285	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
C798_00295	COG2814	Major facilitator Superfamily
C798_00310	COG0840	transmembrane signaling receptor activity
C798_00325	COG0427	acetyl-CoA hydrolase
C798_00330	COG0583	DNA-binding transcription factor activity
C798_00355	COG0505	Belongs to the CarA family
C798_00395	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C798_00415	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C798_00420	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_00440	COG3158	transport of potassium into the cell
C798_00455	COG0765	amino acid transport
C798_00485	COG5000	phosphorelay sensor kinase activity
C798_00510	COG1297	OPT oligopeptide transporter protein
C798_00515	COG4589	Belongs to the CDS family
C798_00525	COG0671	phosphoesterase, PA-phosphatase related
C798_00525	COG2453	phosphatase
C798_00530	COG2267	carboxylic ester hydrolase activity
C798_00535	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C798_00585	COG1484	DNA-dependent DNA replication
C798_00620	COG2850	peptidyl-arginine hydroxylation
C798_00640	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
C798_00680	COG0347	Belongs to the P(II) protein family
C798_00685	COG0004	ammonium transporteR
C798_00695	COG0189	ligase activity
C798_00705	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C798_00710	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C798_00715	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C798_00725	COG2814	Major facilitator Superfamily
C798_00745	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
C798_00765	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
C798_00770	COG0081	regulation of translation
C798_00780	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
C798_00785	COG0222	ribosome binding
C798_00790	COG0085	RNA polymerase activity
C798_00795	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
C798_00805	COG3720	iron ion transport
C798_00810	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
C798_00815	COG0049	tRNA binding
C798_00820	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
C798_00825	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
C798_00830	COG0051	transcription antitermination factor activity, RNA binding
C798_00835	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
C798_00840	COG0088	Forms part of the polypeptide exit tunnel
C798_00845	COG0089	rRNA binding
C798_00850	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
C798_00855	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
C798_00860	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
C798_00865	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
C798_00870	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
C798_00875	COG0255	Belongs to the universal ribosomal protein uL29 family
C798_00880	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
C798_00885	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
C798_00890	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
C798_00895	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
C798_00900	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
C798_00905	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
C798_00910	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
C798_00915	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
C798_00920	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
C798_00925	COG1841	ribosomal large subunit assembly
C798_00930	COG0200	Binds to the 23S rRNA
C798_00935	COG0201	protein transport
C798_00940	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
C798_00945	COG0257	Belongs to the bacterial ribosomal protein bL36 family
C798_00950	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
C798_00955	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
C798_00960	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
C798_00965	COG0202	RNA polymerase activity
C798_00970	COG0203	ribosomal protein L17
C798_00975	COG1324	tolerance protein
C798_00980	COG4232	protein-disulfide reductase activity
C798_00985	COG0450	alkyl hydroperoxide reductase
C798_01000	COG1012	belongs to the aldehyde dehydrogenase family
C798_01010	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C798_01015	COG1595	DNA-templated transcription, initiation
C798_01025	COG0218	Necessary for normal cell division and for the maintenance of normal septation
C798_01035	COG1333	cytochrome c biogenesis protein
C798_01040	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C798_01045	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C798_01060	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
C798_01070	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
C798_01080	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C798_01085	COG0588	phosphoglycerate mutase activity
C798_01090	COG4942	peptidase
C798_01095	COG0793	Belongs to the peptidase S41A family
C798_01100	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
C798_01125	COG4977	sequence-specific DNA binding
C798_01125	COG1917	Cupin 2, conserved barrel domain protein
C798_01155	COG0559	Belongs to the binding-protein-dependent transport system permease family
C798_01185	COG3179	chitinase
C798_01190	COG3501	Rhs element vgr protein
C798_01195	COG0506	proline dehydrogenase activity
C798_01195	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C798_01195	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C798_01200	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
C798_01205	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
C798_01225	COG2165	general secretion pathway protein
C798_01230	COG1965	Belongs to the frataxin family
C798_01260	COG3387	PFAM Glycoside hydrolase 15-related
C798_01265	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
C798_01280	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
C798_01290	COG0494	nUDIX hydrolase
C798_01295	COG3568	Endonuclease Exonuclease Phosphatase
C798_01300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C798_01305	COG0183	Belongs to the thiolase family
C798_01320	COG0765	amino acid transport
C798_01325	COG0765	amino acid transport
C798_01335	COG2186	Transcriptional regulator
C798_01350	COG3501	Rhs element vgr protein
C798_01370	COG1960	acyl-CoA dehydrogenase activity
C798_01375	COG1024	Enoyl-CoA hydratase
C798_01375	COG1250	3-hydroxyacyl-CoA dehydrogenase
C798_01380	COG0183	Belongs to the thiolase family
C798_01385	COG1024	Enoyl-CoA hydratase
C798_01390	COG3501	Rhs element vgr protein
C798_01430	COG1522	sequence-specific DNA binding
C798_01445	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_01455	COG3706	GGDEF domain
C798_01470	COG0280	phosphate acetyltransferase
C798_01475	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C798_01485	COG1309	transcriptional regulator
C798_01490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_01495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C798_01510	COG0395	ABC-type sugar transport system, permease component
C798_01520	COG1653	transport
C798_01550	COG3706	GGDEF domain
C798_01550	COG4251	negative regulation of phosphorylation
C798_01550	COG5001	Diguanylate cyclase
C798_01550	COG2203	Gaf domain
C798_01585	COG0811	peptide transport
C798_01615	COG0443	Heat shock 70 kDa protein
C798_01620	COG0656	L-ascorbic acid biosynthetic process
C798_01630	COG2831	hemolysin activation secretion protein
C798_01635	COG3210	domain, Protein
C798_01650	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
C798_01660	COG0659	secondary active sulfate transmembrane transporter activity
C798_01670	COG1538	Outer membrane efflux protein
C798_01680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_01695	COG2207	Transcriptional regulator
C798_01700	COG0667	Aldo Keto reductase
C798_01710	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_01730	COG2001	Belongs to the MraZ family
C798_01735	COG0275	rRNA processing
C798_01740	COG3116	cell division
C798_01750	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C798_01755	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
C798_01760	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
C798_01765	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
C798_01775	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
C798_01780	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C798_01785	COG1181	Belongs to the D-alanine--D-alanine ligase family
C798_01790	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
C798_01800	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
C798_01805	COG0678	peroxiredoxin activity
C798_01810	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
C798_01825	COG1196	nuclear chromosome segregation
C798_01825	COG0739	heme binding
C798_01825	COG0741	lytic transglycosylase activity
C798_01830	COG0653	protein targeting
C798_01840	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
C798_01850	COG0494	nUDIX hydrolase
C798_01855	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
C798_01860	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
C798_01875	COG1459	type II secretion system
C798_01885	COG4536	flavin adenine dinucleotide binding
C798_01895	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
C798_01930	COG2755	lipolytic protein G-D-S-L family
C798_01930	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
C798_01940	COG0142	geranyltranstransferase activity
C798_01950	COG0261	This protein binds to 23S rRNA in the presence of protein L20
C798_01955	COG0211	Belongs to the bacterial ribosomal protein bL27 family
C798_01960	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
C798_01965	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
C798_01975	COG0494	nUDIX hydrolase
C798_01980	COG0442	prolyl-tRNA aminoacylation
C798_01995	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
C798_02000	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_02005	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_02010	COG1116	anion transmembrane transporter activity
C798_02025	COG3023	N-Acetylmuramoyl-L-alanine amidase
C798_02045	COG0762	integral membrane protein
C798_02055	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C798_02065	COG2264	protein methyltransferase activity
C798_02070	COG0439	Biotin carboxylase
C798_02075	COG0511	ligase activity, forming carbon-carbon bonds
C798_02080	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
C798_02085	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
C798_02110	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C798_02115	COG3150	esterase
C798_02120	COG3161	chorismate lyase activity
C798_02135	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
C798_02140	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C798_02155	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
C798_02170	COG1490	D-aminoacyl-tRNA deacylase activity
C798_02195	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
C798_02200	COG0138	bifunctional purine biosynthesis protein purh
C798_02235	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
C798_02240	COG2354	Protein conserved in bacteria
C798_02245	COG0632	four-way junction helicase activity
C798_02250	COG2255	four-way junction helicase activity
C798_02255	COG3971	2-oxopent-4-enoate hydratase activity
C798_02260	COG1671	Belongs to the UPF0178 family
C798_02270	COG0525	valine-tRNA ligase activity
C798_02275	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
C798_02285	COG2022	thiamine diphosphate biosynthetic process
C798_02290	COG0351	phosphomethylpyrimidine kinase
C798_02295	COG0352	thiamine-phosphate diphosphorylase activity
C798_02300	COG0783	Belongs to the Dps family
C798_02315	COG0210	DNA helicase
C798_02320	COG2831	hemolysin activation secretion protein
C798_02330	COG3210	domain, Protein
C798_02330	COG3210	domain, Protein
C798_02380	COG1175	transmembrane transport
C798_02395	COG3842	ATPase activity
C798_02400	COG0246	Mannitol dehydrogenase
C798_02405	COG1070	Carbohydrate kinase
C798_02410	COG0840	transmembrane signaling receptor activity
C798_02420	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
C798_02435	COG1611	Belongs to the LOG family
C798_02440	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C798_02440	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C798_02445	COG0840	transmembrane signaling receptor activity
C798_02450	COG0412	Dienelactone hydrolase
C798_02470	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_02480	COG1678	Uncharacterized ACR, COG1678
C798_02485	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
C798_02490	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
C798_02495	COG0540	Belongs to the ATCase OTCase family
C798_02510	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
C798_02530	COG0463	Glycosyl transferase, family 2
C798_02535	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
C798_02550	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
C798_02555	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C798_02560	COG1215	transferase activity, transferring glycosyl groups
C798_02570	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
C798_02635	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C798_02640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_02645	COG1309	transcriptional regulator
C798_02650	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C798_02655	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
C798_02675	COG1968	undecaprenyl-diphosphatase activity
C798_02680	COG1968	undecaprenyl-diphosphatase activity
C798_02685	COG0514	ATP-dependent DNA helicase (RecQ)
C798_02700	COG3328	transposase activity
C798_02705	COG2801	Transposase and inactivated derivatives
C798_02725	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
C798_02735	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
C798_02740	COG1278	Cold shock
C798_02765	COG0583	DNA-binding transcription factor activity
C798_02770	COG1028	Short-chain dehydrogenase reductase Sdr
C798_02775	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
C798_02785	COG0840	transmembrane signaling receptor activity
C798_02800	COG0500	methyltransferase
C798_02835	COG0583	DNA-binding transcription factor activity
C798_02855	COG1971	Probably functions as a manganese efflux pump
C798_02860	COG0583	DNA-binding transcription factor activity
C798_02865	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C798_02870	COG2271	Major facilitator Superfamily
C798_02875	COG0129	dihydroxy-acid dehydratase activity
C798_02880	COG0628	permease
C798_02885	COG0346	lactoylglutathione lyase activity
C798_02895	COG2814	Major facilitator Superfamily
C798_02900	COG0840	transmembrane signaling receptor activity
C798_02945	COG0784	Response regulator, receiver
C798_02945	COG4191	Histidine kinase
C798_02950	COG3300	MHYT domain
C798_02950	COG5001	Diguanylate cyclase
C798_02960	COG3685	Protein conserved in bacteria
C798_02965	COG3546	catalase activity
C798_02970	COG0428	transporter
C798_02980	COG3685	Protein conserved in bacteria
C798_03005	COG1063	alcohol dehydrogenase
C798_03015	COG2199	diguanylate cyclase activity
C798_03015	COG2200	EAL domain
C798_03015	COG2203	Gaf domain
C798_03065	COG0004	ammonium transporteR
C798_03080	COG0583	DNA-binding transcription factor activity
C798_03085	COG3384	dioxygenase
C798_03110	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
C798_03125	COG0495	leucyl-tRNA aminoacylation
C798_03130	COG1609	Transcriptional regulator
C798_03140	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
C798_03145	COG1177	transmembrane transport
C798_03150	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
C798_03155	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C798_03175	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
C798_03180	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C798_03185	COG0735	belongs to the Fur family
C798_03190	COG1420	regulation of RNA biosynthetic process
C798_03205	COG0497	DNA recombination
C798_03210	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
C798_03220	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
C798_03225	COG0443	Heat shock 70 kDa protein
C798_03230	COG0484	heat shock protein binding
C798_03235	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
C798_03255	COG1366	Belongs to the anti-sigma-factor antagonist family
C798_03260	COG2198	Histidine kinase
C798_03260	COG0643	Histidine kinase
C798_03265	COG3290	protein histidine kinase activity
C798_03265	COG0840	transmembrane signaling receptor activity
C798_03270	COG0835	chemotaxis
C798_03280	COG2201	protein-glutamate methylesterase activity
C798_03285	COG5001	Diguanylate cyclase
C798_03285	COG3706	GGDEF domain
C798_03285	COG2203	Gaf domain
C798_03285	COG4251	negative regulation of phosphorylation
C798_03295	COG0617	tRNA 3'-terminal CCA addition
C798_03305	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
C798_03310	COG0628	permease
C798_03330	COG2308	Evidence 4 Homologs of previously reported genes of
C798_03355	COG2307	Protein conserved in bacteria
C798_03355	COG2308	Evidence 4 Homologs of previously reported genes of
C798_03365	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C798_03395	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_03400	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_03405	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_03435	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
C798_03440	COG0861	Integral membrane protein TerC family
C798_03445	COG4969	Belongs to the N-Me-Phe pilin family
C798_03450	COG0315	cyclic pyranopterin monophosphate synthase activity
C798_03455	COG4783	chaperone-mediated protein folding
C798_03485	COG0126	phosphoglycerate kinase activity
C798_03490	COG0469	pyruvate kinase activity
C798_03500	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
C798_03505	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
C798_03510	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
C798_03515	COG0009	L-threonylcarbamoyladenylate synthase
C798_03520	COG3047	cAMP biosynthetic process
C798_03525	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C798_03530	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
C798_03535	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C798_03540	COG0259	pyridoxamine-phosphate oxidase activity
C798_03605	COG0482	sulfurtransferase activity
C798_03620	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
C798_03640	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_03645	COG0006	proline dipeptidase activity
C798_03660	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
C798_03665	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C798_03670	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
C798_03675	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
C798_03685	COG5001	Diguanylate cyclase
C798_03720	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
C798_03725	COG0751	glycine-tRNA ligase activity
C798_03730	COG0752	glycyl-tRNA synthetase alpha subunit
C798_03735	COG0815	Transfers the fatty acyl group on membrane lipoproteins
C798_03740	COG4535	Mg2 and Co2 transporter CorC
C798_03745	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
C798_03750	COG1702	phosphate starvation-inducible protein PhoH
C798_03755	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
C798_03765	COG1335	isochorismatase
C798_03770	COG0572	uridine kinase
C798_03775	COG1879	ABC-type sugar transport system periplasmic component
C798_03780	COG1129	ABC transporter
C798_03785	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_03800	COG3706	GGDEF domain
C798_03800	COG5001	Diguanylate cyclase
C798_03800	COG2203	Gaf domain
C798_03800	COG4251	negative regulation of phosphorylation
C798_03820	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
C798_03825	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
C798_03830	COG0840	transmembrane signaling receptor activity
C798_03835	COG2200	EAL domain
C798_03835	COG2199	diguanylate cyclase activity
C798_03835	COG2202	Pas domain
C798_03840	COG0586	Pfam SNARE associated Golgi protein
C798_03845	COG0860	N-Acetylmuramoyl-L-alanine amidase
C798_03850	COG0802	atpase or kinase
C798_03895	COG4974	Belongs to the 'phage' integrase family
C798_03900	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
C798_03905	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
C798_03910	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
C798_03915	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C798_03940	COG0254	rRNA binding
C798_03945	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
C798_03960	COG1074	ATP-dependent DNA helicase activity
C798_03970	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
C798_03975	COG2081	HI0933 family
C798_03980	COG0828	Belongs to the bacterial ribosomal protein bS21 family
C798_03995	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C798_04055	COG0459	protein refolding
C798_04060	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
C798_04080	COG3622	Belongs to the hyi family
C798_04085	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_04090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_04105	COG0583	DNA-binding transcription factor activity
C798_04110	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
C798_04115	COG0066	3-isopropylmalate dehydratase activity
C798_04160	COG0559	Belongs to the binding-protein-dependent transport system permease family
C798_04200	COG0583	DNA-binding transcription factor activity
C798_04205	COG2271	Major facilitator Superfamily
C798_04215	COG2272	Belongs to the type-B carboxylesterase lipase family
C798_04225	COG0583	DNA-binding transcription factor activity
C798_04245	COG3829	transcription factor binding
C798_04255	COG0431	NADPH-dependent FMN reductase
C798_04260	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C798_04275	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_04290	COG0410	ABC transporter
C798_04295	COG0471	metal ion transport
C798_04325	COG3842	ATPase activity
C798_04330	COG3842	ATPase activity
C798_04340	COG0395	ABC-type sugar transport system, permease component
C798_04355	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
C798_04370	COG2223	nitrite transmembrane transporter activity
C798_04390	COG1960	acyl-CoA dehydrogenase activity
C798_04395	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
C798_04395	COG2755	lipolytic protein G-D-S-L family
C798_04415	COG4681	YaeQ
C798_04430	COG2951	lytic endotransglycosylase activity
C798_04435	COG0123	including yeast histone deacetylase and acetoin utilization protein
C798_04445	COG0477	Major facilitator Superfamily
C798_04450	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
C798_04460	COG2011	ABC-type metal ion transport system permease component
C798_04465	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C798_04470	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C798_04475	COG0459	protein refolding
C798_04480	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
C798_04490	COG0697	spore germination
C798_04505	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_04545	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_04570	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C798_04575	COG5001	Diguanylate cyclase
C798_04575	COG3300	MHYT domain
C798_04580	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_04585	COG1129	ABC transporter
C798_04595	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_04605	COG4154	Belongs to the RbsD FucU family
C798_04610	COG1012	belongs to the aldehyde dehydrogenase family
C798_04620	COG1349	DNA-binding transcription factor activity
C798_04625	COG0024	Methionine aminopeptidase
C798_04635	COG0697	spore germination
C798_04640	COG1846	Transcriptional regulator
C798_04645	COG1819	glycosyl
C798_04650	COG2223	nitrite transmembrane transporter activity
C798_04665	COG4948	Mandelate Racemase Muconate Lactonizing
C798_04670	COG0800	Aldolase
C798_04675	COG3734	2-keto-3-deoxy-galactonokinase
C798_04685	COG1879	ABC-type sugar transport system periplasmic component
C798_04690	COG1129	ABC transporter
C798_04695	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_04700	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_04705	COG4213	ABC transporter substrate-binding protein
C798_04715	COG4214	carbohydrate transport
C798_04750	COG4948	Mandelate Racemase Muconate Lactonizing
C798_04755	COG1028	Short-chain dehydrogenase reductase Sdr
C798_04760	COG3254	rhamnose metabolic process
C798_04770	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_04775	COG1879	ABC-type sugar transport system periplasmic component
C798_04780	COG3618	amidohydrolase
C798_04785	COG1309	transcriptional regulator
C798_04800	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C798_04810	COG0300	oxidoreductase activity
C798_04830	COG1879	ABC-type sugar transport system periplasmic component
C798_04835	COG1129	ABC transporter
C798_04840	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_04850	COG1069	ribulokinase activity
C798_04865	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C798_04885	COG0625	glutathione transferase activity
C798_04900	COG0518	GMP synthase (glutamine-hydrolyzing) activity
C798_04900	COG0519	Catalyzes the synthesis of GMP from XMP
C798_04905	COG4774	siderophore transport
C798_04915	COG1595	DNA-templated transcription, initiation
C798_04920	COG0583	DNA-binding transcription factor activity
C798_04945	COG1177	transmembrane transport
C798_04950	COG1176	ABC-type spermidine putrescine transport system, permease component I
C798_04960	COG3842	ATPase activity
C798_04965	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C798_04975	COG0540	Belongs to the ATCase OTCase family
C798_04985	COG1253	flavin adenine dinucleotide binding
C798_04990	COG3012	SEC-C Motif Domain Protein
C798_04990	COG3318	Belongs to the UPF0149 family
C798_05005	COG0405	Gamma-glutamyltransferase
C798_05010	COG1609	Transcriptional regulator
C798_05025	COG1028	Short-chain dehydrogenase reductase Sdr
C798_05030	COG1063	alcohol dehydrogenase
C798_05035	COG0840	transmembrane signaling receptor activity
C798_05040	COG1063	alcohol dehydrogenase
C798_05045	COG1461	Dihydroxyacetone kinase
C798_05050	COG2376	Dihydroxyacetone kinase
C798_05055	COG1028	Short-chain dehydrogenase reductase Sdr
C798_05060	COG1879	ABC-type sugar transport system periplasmic component
C798_05065	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_05070	COG1129	ABC transporter
C798_05075	COG0698	ribose 5-phosphate isomerase
C798_05080	COG2390	Transcriptional regulator
C798_05090	COG1737	Transcriptional regulator
C798_05095	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
C798_05105	COG0129	dihydroxy-acid dehydratase activity
C798_05110	COG0800	Aldolase
C798_05120	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
C798_05125	COG0583	DNA-binding transcription factor activity
C798_05130	COG4654	Cytochrome c, class I
C798_05135	COG3958	Transketolase
C798_05140	COG3959	Transketolase, thiamine diphosphate binding domain
C798_05145	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
C798_05150	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
C798_05155	COG1028	Short-chain dehydrogenase reductase Sdr
C798_05160	COG0583	DNA-binding transcription factor activity
C798_05175	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
C798_05180	COG1309	transcriptional regulator
C798_05185	COG0604	alcohol dehydrogenase
C798_05205	COG2814	Major facilitator Superfamily
C798_05210	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
C798_05240	COG1522	sequence-specific DNA binding
C798_05245	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C798_05255	COG0454	-acetyltransferase
C798_05260	COG1012	belongs to the aldehyde dehydrogenase family
C798_05265	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_05270	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C798_05285	COG0747	negative chemotaxis
C798_05290	COG0601	transmembrane transport
C798_05295	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C798_05310	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_05315	COG0583	DNA-binding transcription factor activity
C798_05320	COG0251	oxidation-reduction process
C798_05330	COG1473	amidohydrolase
C798_05345	COG0583	DNA-binding transcription factor activity
C798_05355	COG0840	transmembrane signaling receptor activity
C798_05360	COG0583	DNA-binding transcription factor activity
C798_05365	COG1960	acyl-CoA dehydrogenase activity
C798_05370	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_05375	COG1024	Enoyl-CoA hydratase
C798_05380	COG1960	acyl-CoA dehydrogenase activity
C798_05385	COG1960	acyl-CoA dehydrogenase activity
C798_05390	COG0183	Belongs to the thiolase family
C798_05395	COG1024	Enoyl-CoA hydratase
C798_05395	COG1250	3-hydroxyacyl-CoA dehydrogenase
C798_05440	COG3328	transposase activity
C798_05445	COG0281	malic enzyme
C798_05445	COG0280	phosphate acetyltransferase
C798_05455	COG0745	RESPONSE REGULATOR receiver
C798_05465	COG0811	peptide transport
C798_05490	COG1846	Transcriptional regulator
C798_05495	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C798_05510	COG2814	Major facilitator Superfamily
C798_05540	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
C798_05550	COG1070	Carbohydrate kinase
C798_05570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C798_05580	COG1609	Transcriptional regulator
C798_05600	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C798_05605	COG1570	exodeoxyribonuclease VII activity
C798_05610	COG0811	peptide transport
C798_05615	COG0848	biopolymer transport protein
C798_05620	COG1663	tetraacyldisaccharide 4'-kinase activity
C798_05625	COG2835	tetraacyldisaccharide 4'-kinase activity
C798_05630	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
C798_05635	COG0563	adenylate kinase activity
C798_05640	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
C798_05660	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
C798_05665	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
C798_05665	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
C798_05670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C798_05675	COG0668	transmembrane transport
C798_05685	COG0267	Belongs to the bacterial ribosomal protein bL33 family
C798_05690	COG0227	Belongs to the bacterial ribosomal protein bL28 family
C798_05695	COG2003	Belongs to the UPF0758 family
C798_05700	COG1047	Peptidyl-prolyl cis-trans
C798_05705	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
C798_05710	COG0559	Belongs to the binding-protein-dependent transport system permease family
C798_05745	COG2193	ferroxidase activity
C798_05750	COG3237	CsbD-like
C798_05760	COG2823	Periplasmic or secreted lipoprotein
C798_05770	COG2201	protein-glutamate methylesterase activity
C798_05805	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_05810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_05815	COG1116	anion transmembrane transporter activity
C798_05825	COG2363	Small membrane protein
C798_05845	COG2186	Transcriptional regulator
C798_05850	COG1304	FMN binding
C798_05885	COG2885	chlorophyll binding
C798_05890	COG0823	Involved in the tonB-independent uptake of proteins
C798_05910	COG0824	Thioesterase
C798_05915	COG4221	oxidoreductase activity
C798_05920	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
C798_05925	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
C798_05950	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
C798_05955	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
C798_05960	COG0343	queuine tRNA-ribosyltransferase activity
C798_05965	COG2198	Histidine kinase
C798_05965	COG0784	Response regulator, receiver
C798_05965	COG2205	protein histidine kinase activity
C798_05970	COG2197	response regulator
C798_05995	COG1862	Preprotein translocase
C798_06005	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C798_06010	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
C798_06015	COG0697	spore germination
C798_06040	COG1028	Short-chain dehydrogenase reductase Sdr
C798_06055	COG0438	transferase activity, transferring glycosyl groups
C798_06055	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
C798_06060	COG0840	transmembrane signaling receptor activity
C798_06065	COG0840	transmembrane signaling receptor activity
C798_06080	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
C798_06085	COG0573	inorganic phosphate transmembrane transporter activity
C798_06095	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
C798_06100	COG0704	Plays a role in the regulation of phosphate uptake
C798_06115	COG0840	transmembrane signaling receptor activity
C798_06120	COG1028	Short-chain dehydrogenase reductase Sdr
C798_06180	COG0583	DNA-binding transcription factor activity
C798_06185	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
C798_06200	COG2197	response regulator
C798_06215	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
C798_06220	COG2200	EAL domain
C798_06220	COG3287	FIST C domain
C798_06220	COG2199	diguanylate cyclase activity
C798_06235	COG2831	hemolysin activation secretion protein
C798_06240	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
C798_06260	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C798_06265	COG0463	Glycosyl transferase, family 2
C798_06345	COG0477	Major facilitator Superfamily
C798_06350	COG0579	oxidoreductase
C798_06355	COG0583	DNA-binding transcription factor activity
C798_06365	COG3501	Rhs element vgr protein
C798_06385	COG0165	Argininosuccinate lyase
C798_06390	COG1028	Short-chain dehydrogenase reductase Sdr
C798_06395	COG0583	DNA-binding transcription factor activity
C798_06415	COG1215	transferase activity, transferring glycosyl groups
C798_06420	COG1215	transferase activity, transferring glycosyl groups
C798_06425	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
C798_06430	COG0457	Tetratricopeptide repeat
C798_06465	COG1196	nuclear chromosome segregation
C798_06475	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C798_06480	COG4829	muconolactone delta-isomerase
C798_06495	COG3485	protocatechuate 3,4-dioxygenase
C798_06515	COG1028	Short-chain dehydrogenase reductase Sdr
C798_06520	COG0251	oxidation-reduction process
C798_06525	COG2814	Major facilitator Superfamily
C798_06530	COG3135	benzoate transporter
C798_06535	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
C798_06540	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
C798_06550	COG3284	Transcriptional regulator
C798_06580	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
C798_06585	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
C798_06590	COG0840	transmembrane signaling receptor activity
C798_06595	COG4566	intracellular signal transduction
C798_06615	COG4638	Rieske (2fe-2S)
C798_06630	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C798_06635	COG4191	Histidine kinase
C798_06650	COG1028	Short-chain dehydrogenase reductase Sdr
C798_06675	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
C798_06705	COG3501	Rhs element vgr protein
C798_06715	COG2271	Major facilitator Superfamily
C798_06720	COG0154	amidase activity
C798_06740	COG1749	Flagellar hook protein flgE
C798_06745	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
C798_06745	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
C798_06760	COG3712	iron ion homeostasis
C798_06770	COG3706	GGDEF domain
C798_06770	COG5001	Diguanylate cyclase
C798_06770	COG2203	Gaf domain
C798_06770	COG4251	negative regulation of phosphorylation
C798_06775	COG0840	transmembrane signaling receptor activity
C798_06790	COG2199	diguanylate cyclase activity
C798_06790	COG2200	EAL domain
C798_06790	COG2203	Gaf domain
C798_06810	COG3292	Two component regulator propeller
C798_06810	COG2205	protein histidine kinase activity
C798_06810	COG0745	RESPONSE REGULATOR receiver
C798_06840	COG1850	ribulose-bisphosphate carboxylase activity
C798_06850	COG2186	Transcriptional regulator
C798_06860	COG1739	Uncharacterized protein family UPF0029
C798_06870	COG1752	Esterase of the alpha-beta hydrolase superfamily
C798_06875	COG0791	NLP P60 protein
C798_06880	COG3193	protein, possibly involved in utilization of glycolate and propanediol
C798_06885	COG0505	Belongs to the CarA family
C798_06890	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
C798_06895	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C798_06900	COG1534	Rna-binding protein
C798_06905	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
C798_06910	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C798_06915	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
C798_06920	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C798_06930	COG1529	Aldehyde oxidase and xanthine dehydrogenase
C798_06930	COG2010	Cytochrome c
C798_06955	COG0728	peptidoglycan biosynthetic process
C798_06960	COG0268	Binds directly to 16S ribosomal RNA
C798_06985	COG1278	Cold shock
C798_06990	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
C798_06995	COG0542	response to heat
C798_07005	COG0756	dUTP diphosphatase activity
C798_07010	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
C798_07015	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
C798_07020	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
C798_07025	COG0196	riboflavin kinase activity
C798_07030	COG1802	Transcriptional regulator
C798_07040	COG1335	isochorismatase
C798_07050	COG1335	isochorismatase
C798_07070	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
C798_07075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_07080	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_07095	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C798_07110	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C798_07120	COG2226	methyltransferase
C798_07125	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
C798_07135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C798_07140	COG0312	modulator of DNA gyrase
C798_07145	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C798_07165	COG1666	GTP binding
C798_07170	COG0812	UDP-N-acetylmuramate dehydrogenase activity
C798_07175	COG3123	guanosine phosphorylase activity
C798_07180	COG0137	argininosuccinate synthase activity
C798_07185	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
C798_07195	COG1162	GTPase activity
C798_07200	COG2154	pterin-4-alpha-carbinolamine dehydratase
C798_07205	COG0501	Belongs to the peptidase M48B family
C798_07210	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
C798_07215	COG3012	SEC-C Motif Domain Protein
C798_07215	COG3318	Belongs to the UPF0149 family
C798_07225	COG0840	transmembrane signaling receptor activity
C798_07230	COG0519	Catalyzes the synthesis of GMP from XMP
C798_07245	COG1295	ribonuclease BN
C798_07250	COG0243	molybdopterin cofactor binding
C798_07265	COG3706	GGDEF domain
C798_07275	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_07305	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
C798_07310	COG2918	glutathione biosynthetic process
C798_07315	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
C798_07320	COG0508	dehydrogenase complex catalyzes the overall conversion of
C798_07325	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C798_07340	COG0277	FAD linked oxidase domain protein
C798_07360	COG1028	Short-chain dehydrogenase reductase Sdr
C798_07385	COG0765	amino acid transport
C798_07390	COG0765	amino acid transport
C798_07400	COG1116	anion transmembrane transporter activity
C798_07405	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_07410	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_07415	COG1028	Short-chain dehydrogenase reductase Sdr
C798_07430	COG1414	Transcriptional regulator
C798_07435	COG1028	Short-chain dehydrogenase reductase Sdr
C798_07445	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
C798_07450	COG1012	belongs to the aldehyde dehydrogenase family
C798_07460	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_07500	COG0583	DNA-binding transcription factor activity
C798_07510	COG0583	DNA-binding transcription factor activity
C798_07520	COG3842	ATPase activity
C798_07540	COG3328	transposase activity
C798_07565	COG0473	3-isopropylmalate dehydrogenase activity
C798_07570	COG0676	glucose-6-phosphate 1-epimerase activity
C798_07575	COG0583	DNA-binding transcription factor activity
C798_07585	COG1910	domain protein
C798_07590	COG2223	nitrite transmembrane transporter activity
C798_07605	COG3383	formate dehydrogenase (NAD+) activity
C798_07610	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
C798_07625	COG0583	DNA-binding transcription factor activity
C798_07635	COG2329	Antibiotic biosynthesis monooxygenase
C798_07640	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
C798_07645	COG0596	Alpha beta hydrolase
C798_07655	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_07660	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_07660	COG1116	anion transmembrane transporter activity
C798_07685	COG1609	Transcriptional regulator
C798_07700	COG0765	amino acid transport
C798_07715	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C798_07720	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C798_07735	COG1960	acyl-CoA dehydrogenase activity
C798_07745	COG0228	four-way junction DNA binding
C798_07750	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
C798_07755	COG0336	Belongs to the RNA methyltransferase TrmD family
C798_07760	COG0335	large ribosomal subunit rRNA binding
C798_07765	COG0494	nUDIX hydrolase
C798_07770	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
C798_07780	COG0114	fumarate hydratase activity
C798_07800	COG2205	protein histidine kinase activity
C798_07805	COG0745	RESPONSE REGULATOR receiver
C798_07815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_07820	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C798_07825	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C798_07835	COG0512	Glutamine amidotransferase of anthranilate synthase
C798_07835	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C798_07840	COG0477	Major facilitator Superfamily
C798_07845	COG0697	spore germination
C798_07850	COG0598	Magnesium transport protein CorA
C798_07865	COG0601	transmembrane transport
C798_07870	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C798_07875	COG4172	Belongs to the ABC transporter superfamily
C798_07885	COG5001	Diguanylate cyclase
C798_07885	COG4251	negative regulation of phosphorylation
C798_07885	COG3706	GGDEF domain
C798_07885	COG2203	Gaf domain
C798_07930	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C798_07940	COG0582	viral genome integration into host DNA
C798_08105	COG5001	Diguanylate cyclase
C798_08105	COG4251	negative regulation of phosphorylation
C798_08105	COG3706	GGDEF domain
C798_08105	COG2203	Gaf domain
C798_08245	COG4695	Portal protein
C798_08305	COG2192	nodulation
C798_08355	COG1285	pathogenesis
C798_08360	COG2205	protein histidine kinase activity
C798_08360	COG0784	Response regulator, receiver
C798_08375	COG3121	Chaperone
C798_08385	COG3121	Chaperone
C798_08445	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_08465	COG0745	RESPONSE REGULATOR receiver
C798_08480	COG0840	transmembrane signaling receptor activity
C798_08520	COG1104	cysteine desulfurase activity
C798_08525	COG0583	DNA-binding transcription factor activity
C798_08530	COG2072	flavoprotein involved in K transport
C798_08535	COG0601	transmembrane transport
C798_08545	COG0444	Belongs to the ABC transporter superfamily
C798_08550	COG4608	Belongs to the ABC transporter superfamily
C798_08555	COG0747	negative chemotaxis
C798_08580	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C798_08585	COG0583	DNA-binding transcription factor activity
C798_08595	COG1045	serine acetyltransferase
C798_08610	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_08635	COG0318	PFAM AMP-dependent synthetase and ligase
C798_08645	COG2132	Multicopper oxidase
C798_08670	COG2267	carboxylic ester hydrolase activity
C798_08675	COG0789	Transcriptional regulator
C798_08680	COG2217	Heavy metal translocating P-type atpase
C798_08700	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C798_08730	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
C798_08735	COG2878	Part of a membrane complex involved in electron transport
C798_08745	COG0492	ferredoxin-NADP+ reductase activity
C798_08750	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
C798_08760	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
C798_08820	COG0123	including yeast histone deacetylase and acetoin utilization protein
C798_08835	COG2226	methyltransferase
C798_08850	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
C798_08855	COG0431	NADPH-dependent FMN reductase
C798_08860	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_08865	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C798_08870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_08875	COG1116	anion transmembrane transporter activity
C798_08880	COG3585	molybdate ion transport
C798_08895	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
C798_08900	COG4208	sulfate ABC transporter
C798_08905	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
C798_08910	COG0583	DNA-binding transcription factor activity
C798_08990	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C798_09000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C798_09005	COG0765	amino acid transport
C798_09010	COG0765	amino acid transport
C798_09020	COG0436	Aminotransferase
C798_09025	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
C798_09035	COG2814	Major facilitator Superfamily
C798_09050	COG1522	sequence-specific DNA binding
C798_09065	COG3210	domain, Protein
C798_09135	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_09145	COG0243	molybdopterin cofactor binding
C798_09155	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C798_09180	COG1477	protein flavinylation
C798_09185	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
C798_09190	COG1253	flavin adenine dinucleotide binding
C798_09235	COG0583	DNA-binding transcription factor activity
C798_09255	COG3501	Rhs element vgr protein
C798_09270	COG0513	Belongs to the DEAD box helicase family
C798_09300	COG1187	pseudouridine synthase activity
C798_09310	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
C798_09320	COG2833	Protein of unknown function (DUF455)
C798_09330	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
C798_09355	COG0028	Belongs to the TPP enzyme family
C798_09365	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
C798_09380	COG0688	phosphatidylethanolamine metabolic process
C798_09385	COG1183	phosphatidylcholine synthase activity
C798_09410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C798_09435	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
C798_09455	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
C798_09460	COG1185	polyribonucleotide nucleotidyltransferase activity
C798_09465	COG1252	NADH dehydrogenase
C798_09485	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
C798_09490	COG1984	allophanate hydrolase subunit 2
C798_09495	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
C798_09505	COG0604	alcohol dehydrogenase
C798_09505	COG1028	Short-chain dehydrogenase reductase Sdr
C798_09505	COG3321	synthase
C798_09510	COG0149	triose-phosphate isomerase activity
C798_09515	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
C798_09525	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C798_09530	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C798_09535	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C798_09540	COG0649	NAD binding
C798_09555	COG1034	ATP synthesis coupled electron transport
C798_09560	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
C798_09565	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C798_09575	COG0713	ATP synthesis coupled electron transport
C798_09590	COG1007	ATP synthesis coupled electron transport
C798_09600	COG0494	nUDIX hydrolase
C798_09635	COG2267	carboxylic ester hydrolase activity
C798_09660	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
C798_09675	COG4115	mRNA cleavage
C798_09685	COG1028	Short-chain dehydrogenase reductase Sdr
C798_09720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_09745	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
C798_09755	COG0697	spore germination
C798_09765	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C798_09780	COG1942	4-Oxalocrotonate Tautomerase
C798_09805	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_09810	COG1129	ABC transporter
C798_09810	COG0842	Transport permease protein
C798_09815	COG0842	Transport permease protein
C798_09855	COG0443	Heat shock 70 kDa protein
C798_09885	COG0583	DNA-binding transcription factor activity
C798_09900	COG4172	Belongs to the ABC transporter superfamily
C798_09905	COG0747	negative chemotaxis
C798_09940	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
C798_09950	COG0405	Gamma-glutamyltransferase
C798_09955	COG4608	Belongs to the ABC transporter superfamily
C798_09960	COG0444	Belongs to the ABC transporter superfamily
C798_09980	COG1846	Transcriptional regulator
C798_09990	COG0400	carboxylic ester hydrolase activity
C798_10000	COG0521	Mo-molybdopterin cofactor biosynthetic process
C798_10005	COG3028	Belongs to the UPF0307 family
C798_10010	COG0312	modulator of DNA gyrase
C798_10020	COG0477	Major facilitator Superfamily
C798_10025	COG0415	Belongs to the DNA photolyase family
C798_10035	COG0557	exoribonuclease II activity
C798_10040	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C798_10045	COG1045	serine acetyltransferase
C798_10050	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C798_10055	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C798_10075	COG0215	cysteine-tRNA ligase activity
C798_10085	COG0825	malonyl-CoA metabolic process
C798_10090	COG0037	tRNA processing
C798_10105	COG1280	lysine exporter protein (LysE YggA)
C798_10125	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
C798_10140	COG0303	'Molybdopterin
C798_10145	COG0746	molybdenum cofactor guanylyltransferase activity
C798_10150	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
C798_10155	COG1530	ribonuclease E activity
C798_10185	COG0248	Ppx GppA phosphatase
C798_10190	COG1840	ABC-type Fe3 transport system, periplasmic component
C798_10230	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
C798_10230	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C798_10235	COG0347	Belongs to the P(II) protein family
C798_10240	COG1012	belongs to the aldehyde dehydrogenase family
C798_10250	COG3284	Transcriptional regulator
C798_10265	COG2840	Smr protein MutS2
C798_10275	COG0492	ferredoxin-NADP+ reductase activity
C798_10280	COG1674	ftsk spoiiie
C798_10285	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
C798_10290	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
C798_10295	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
C798_10330	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
C798_10335	COG5001	Diguanylate cyclase
C798_10335	COG3300	MHYT domain
C798_10345	COG3706	GGDEF domain
C798_10350	COG1609	Transcriptional regulator
C798_10370	COG0424	maF-like protein
C798_10380	COG0333	Belongs to the bacterial ribosomal protein bL32 family
C798_10385	COG0416	fatty acid biosynthetic process
C798_10390	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
C798_10405	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C798_10410	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C798_10435	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C798_10445	COG0481	GTPase activity
C798_10450	COG0681	Belongs to the peptidase S26 family
C798_10455	COG0571	ribonuclease III activity
C798_10460	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
C798_10465	COG1381	Involved in DNA repair and RecF pathway recombination
C798_10470	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
C798_10475	COG0736	holo-[acyl-carrier-protein] synthase activity
C798_10485	COG0322	excinuclease ABC activity
C798_10520	COG0835	chemotaxis
C798_10520	COG0784	Response regulator, receiver
C798_10525	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
C798_10530	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
C798_10535	COG0406	alpha-ribazole phosphatase activity
C798_10550	COG1966	Carbon starvation protein
C798_10555	COG2879	small protein
C798_10570	COG2203	Gaf domain
C798_10570	COG3706	GGDEF domain
C798_10570	COG5001	Diguanylate cyclase
C798_10570	COG4251	negative regulation of phosphorylation
C798_10580	COG0501	Belongs to the peptidase M48B family
C798_10585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C798_10585	COG4651	solute:proton antiporter activity
C798_10590	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
C798_10630	COG0251	oxidation-reduction process
C798_10635	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C798_10665	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
C798_10670	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
C798_10675	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C798_10675	COG0072	phenylalanine-tRNA ligase activity
C798_10680	COG0776	regulation of translation
C798_10745	COG0297	glycogen (starch) synthase activity
C798_10745	COG0438	transferase activity, transferring glycosyl groups
C798_10755	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
C798_10755	COG2755	lipolytic protein G-D-S-L family
C798_10775	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
C798_10800	COG2877	3-deoxy-8-phosphooctulonate synthase activity
C798_10805	COG0517	IMP dehydrogenase activity
C798_10805	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
C798_10815	COG1045	serine acetyltransferase
C798_10825	COG1929	Belongs to the glycerate kinase type-1 family
C798_10845	COG3594	Acyltransferase
C798_10870	COG0840	transmembrane signaling receptor activity
C798_10875	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
C798_10880	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
C798_10885	COG2201	protein-glutamate methylesterase activity
C798_10890	COG0745	RESPONSE REGULATOR receiver
C798_10900	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
C798_10905	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
C798_10920	COG1191	sigma factor activity
C798_10940	COG1815	bacterial-type flagellum-dependent cell motility
C798_10950	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
C798_10960	COG4787	bacterial-type flagellum-dependent cell motility
C798_10970	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
C798_10975	COG1706	bacterial-type flagellum-dependent cell motility
C798_10980	COG3951	Flagellar rod assembly protein muramidase FlgJ
C798_10980	COG1705	Flagellar rod assembly protein muramidase FlgJ
C798_11005	COG1338	Plays a role in the flagellum-specific transport system
C798_11010	COG3190	flagellar
C798_11015	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
C798_11025	COG1580	Controls the rotational direction of flagella during chemotaxis
C798_11055	COG1766	The M ring may be actively involved in energy transduction
C798_11060	COG1677	Flagellar hook-basal body complex protein FliE
C798_11065	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
C798_11070	COG2257	FlhB HrpN YscU SpaS Family
C798_11090	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
C798_11110	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C798_11115	COG0360	Binds together with S18 to 16S ribosomal RNA
C798_11125	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
C798_11130	COG0359	binds to the 23S rRNA
C798_11135	COG0305	Participates in initiation and elongation during chromosome replication
C798_11145	COG0306	phosphate transporter
C798_11150	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
C798_11155	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
C798_11160	COG0726	polysaccharide deacetylase
C798_11170	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C798_11170	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
C798_11175	COG0463	Glycosyl transferase, family 2
C798_11180	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C798_11185	COG2076	Multidrug Resistance protein
C798_11200	COG0436	Aminotransferase
C798_11225	COG3739	integral membrane protein
C798_11230	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
C798_11245	COG0314	molybdopterin synthase activity
C798_11250	COG1914	H( )-stimulated, divalent metal cation uptake system
C798_11265	COG1566	PFAM secretion protein HlyD family protein
C798_11285	COG0583	DNA-binding transcription factor activity
C798_11290	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
C798_11295	COG0542	response to heat
C798_11305	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
C798_11310	COG1289	transmembrane transporter activity
C798_11315	COG2224	Isocitrate lyase
C798_11325	COG4149	molybdate abc transporter
C798_11330	COG0725	ABC transporter, periplasmic molybdate-binding protein
C798_11340	COG0038	chloride channel
C798_11345	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
C798_11350	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
C798_11375	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
C798_11380	COG0583	DNA-binding transcription factor activity
C798_11385	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C798_11390	COG1758	RNA polymerase activity
C798_11395	COG0194	GDP metabolic process
C798_11400	COG1561	YicC-like family, N-terminal region
C798_11405	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
C798_11410	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
C798_11415	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C798_11455	COG0527	aspartate kinase activity
C798_11465	COG0583	DNA-binding transcription factor activity
C798_11475	COG1214	PFAM Peptidase M22, glycoprotease
C798_11485	COG1573	uracil-dna glycosylase
C798_11495	COG2814	Major facilitator Superfamily
C798_11500	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
C798_11515	COG2205	protein histidine kinase activity
C798_11520	COG0745	RESPONSE REGULATOR receiver
C798_11540	COG0488	(ABC) transporter
C798_11545	COG2890	protein-(glutamine-N5) methyltransferase activity
C798_11550	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C798_11555	COG1393	Belongs to the ArsC family
C798_11560	COG2171	N-acyltransferase activity
C798_11570	COG0840	transmembrane signaling receptor activity
C798_11585	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
C798_11590	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C798_11595	COG0242	peptide deformylase activity
C798_11600	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C798_11600	COG0189	ligase activity
C798_11605	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C798_11605	COG1181	Belongs to the D-alanine--D-alanine ligase family
C798_11610	COG1132	(ABC) transporter
C798_11620	COG1187	pseudouridine synthase activity
C798_11625	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
C798_11630	COG0024	Methionine aminopeptidase
C798_11635	COG0052	Belongs to the universal ribosomal protein uS2 family
C798_11640	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
C798_11645	COG0528	UMP kinase activity
C798_11650	COG0233	cytoplasmic translational termination
C798_11655	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C798_11660	COG0575	Belongs to the CDS family
C798_11665	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
C798_11670	COG0750	zinc metalloprotease
C798_11685	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C798_11690	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
C798_11695	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C798_11705	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
C798_11710	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C798_11720	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
C798_11750	COG2205	protein histidine kinase activity
C798_11755	COG0745	RESPONSE REGULATOR receiver
C798_11765	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
C798_11780	COG0517	IMP dehydrogenase activity
C798_11780	COG0516	GMP reductase activity
C798_11785	COG0519	Catalyzes the synthesis of GMP from XMP
C798_11785	COG0518	GMP synthase (glutamine-hydrolyzing) activity
C798_11800	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
C798_11830	COG0602	queuosine metabolic process
C798_11835	COG0720	synthase
C798_11845	COG1619	proteins homologs of microcin C7 resistance protein MccF
C798_11855	COG0488	(ABC) transporter
C798_11860	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
C798_11875	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
C798_11880	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
C798_11885	COG4691	Plasmid stability protein
C798_11890	COG1487	ribonuclease activity
C798_11905	COG2851	Citrate transporter
C798_11915	COG0477	Major facilitator Superfamily
C798_11925	COG1840	ABC-type Fe3 transport system, periplasmic component
C798_11930	COG4149	molybdate abc transporter
C798_11935	COG3842	ATPase activity
C798_11945	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C798_11960	COG4181	ATPase activity
C798_11970	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
C798_11970	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
C798_11975	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_11980	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
C798_11980	COG0047	phosphoribosylformylglycinamidine synthase activity
C798_11990	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C798_12000	COG2917	probably involved in intracellular septation
C798_12005	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
C798_12010	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
C798_12025	COG0411	ABC transporter
C798_12060	COG2271	Major facilitator Superfamily
C798_12070	COG1012	belongs to the aldehyde dehydrogenase family
C798_12115	COG0166	Belongs to the GPI family
C798_12125	COG4251	negative regulation of phosphorylation
C798_12130	COG0784	Response regulator, receiver
C798_12135	COG2205	protein histidine kinase activity
C798_12180	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C798_12185	COG3781	membrane
C798_12205	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_12215	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_12220	COG0681	Belongs to the peptidase S26 family
C798_12225	COG1309	transcriptional regulator
C798_12240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C798_12250	COG1028	Short-chain dehydrogenase reductase Sdr
C798_12255	COG0643	Histidine kinase
C798_12255	COG2198	Histidine kinase
C798_12275	COG0745	RESPONSE REGULATOR receiver
C798_12310	COG0038	chloride channel
C798_12335	COG2801	Transposase and inactivated derivatives
C798_12360	COG0477	Major facilitator Superfamily
C798_12365	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
C798_12370	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
C798_12375	COG1845	cytochrome c oxidase, subunit III
C798_12380	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
C798_12395	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
C798_12420	COG4191	Histidine kinase
C798_12420	COG0784	Response regulator, receiver
C798_12430	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C798_12440	COG0156	8-amino-7-oxononanoate synthase activity
C798_12450	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
C798_12465	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C798_12470	COG0583	DNA-binding transcription factor activity
C798_12475	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_12495	COG0417	DNA replication proofreading
C798_12505	COG2814	Major facilitator Superfamily
C798_12510	COG0840	transmembrane signaling receptor activity
C798_12515	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C798_12520	COG1957	nucleoside hydrolase
C798_12525	COG3842	ATPase activity
C798_12550	COG0583	DNA-binding transcription factor activity
C798_12590	COG0642	Histidine kinase
C798_12600	COG0642	Histidine kinase
C798_12605	COG0745	RESPONSE REGULATOR receiver
C798_12615	COG1309	transcriptional regulator
C798_12630	COG1595	DNA-templated transcription, initiation
C798_12640	COG4774	siderophore transport
C798_12645	COG1595	DNA-templated transcription, initiation
C798_12655	COG4774	siderophore transport
C798_12660	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
C798_12665	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C798_12675	COG1045	serine acetyltransferase
C798_12705	COG2372	response to copper ion
C798_12710	COG1276	copper resistance
C798_12725	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
C798_12730	COG2814	Major facilitator Superfamily
C798_12780	COG0583	DNA-binding transcription factor activity
C798_12810	COG0765	amino acid transport
C798_12815	COG0765	amino acid transport
C798_12825	COG0765	amino acid transport
C798_12850	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C798_12855	COG2855	membrane
C798_12870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_12885	COG0436	Aminotransferase
C798_12890	COG0277	FAD linked oxidase domain protein
C798_12910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_12915	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
C798_12920	COG4521	taurine ABC transporter
C798_13000	COG2801	Transposase and inactivated derivatives
C798_13125	COG0583	DNA-binding transcription factor activity
C798_13135	COG1335	isochorismatase
C798_13140	COG2153	protein acetylation
C798_13145	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
C798_13150	COG1104	cysteine desulfurase activity
C798_13155	COG0822	iron-sulfur transferase activity
C798_13160	COG0316	Belongs to the HesB IscA family
C798_13170	COG0443	Heat shock 70 kDa protein
C798_13175	COG0633	Ferredoxin
C798_13230	COG4231	catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
C798_13235	COG5420	small protein containing a coiled-coil domain
C798_13250	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
C798_13255	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
C798_13260	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
C798_13305	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C798_13315	COG5554	nitrogen fixation
C798_13320	COG1104	cysteine desulfurase activity
C798_13335	COG5554	nitrogen fixation
C798_13350	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C798_13370	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C798_13430	COG4771	TonB-dependent receptor
C798_13450	COG0840	transmembrane signaling receptor activity
C798_13555	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
C798_13565	COG4794	Type iii secretion
C798_13610	COG4789	Type iii secretion
C798_13655	COG0500	methyltransferase
C798_13710	COG2843	Capsule synthesis protein
C798_13725	COG4608	Belongs to the ABC transporter superfamily
C798_13735	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C798_13740	COG0601	transmembrane transport
C798_13745	COG0747	negative chemotaxis
C798_13770	COG1028	Short-chain dehydrogenase reductase Sdr
C798_13790	COG1454	alcohol dehydrogenase
C798_13800	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
C798_13805	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
C798_13810	COG1012	belongs to the aldehyde dehydrogenase family
C798_13820	COG0174	glutamine synthetase
C798_13825	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
C798_13850	COG1309	transcriptional regulator
C798_13855	COG0154	amidase activity
C798_13860	COG0531	amino acid
C798_13865	COG2011	ABC-type metal ion transport system permease component
C798_13870	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C798_13875	COG1464	Belongs to the NlpA lipoprotein family
C798_13880	COG1858	cytochrome C peroxidase
C798_13895	COG0745	RESPONSE REGULATOR receiver
C798_13900	COG0642	Histidine kinase
C798_13910	COG3002	Belongs to the UPF0753 family
C798_13915	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C798_13920	COG0583	DNA-binding transcription factor activity
C798_13930	COG0640	Transcriptional regulator
C798_13980	COG1546	Belongs to the CinA family
C798_13985	COG1028	Short-chain dehydrogenase reductase Sdr
C798_14000	COG4191	Histidine kinase
C798_14000	COG0784	Response regulator, receiver
C798_14005	COG2982	Protein involved in outer membrane biogenesis
C798_14015	COG1869	D-ribose catabolic process
C798_14030	COG1129	ABC transporter
C798_14035	COG1879	ABC-type sugar transport system periplasmic component
C798_14040	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
C798_14065	COG0402	S-adenosylhomocysteine deaminase activity
C798_14075	COG1126	abc transporter atp-binding protein
C798_14080	COG0765	amino acid transport
C798_14085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C798_14095	COG1802	Transcriptional regulator
C798_14110	COG0277	FAD linked oxidase domain protein
C798_14115	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_14120	COG1129	ABC transporter
C798_14145	COG1070	Carbohydrate kinase
C798_14150	COG1012	belongs to the aldehyde dehydrogenase family
C798_14155	COG1028	Short-chain dehydrogenase reductase Sdr
C798_14180	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
C798_14180	COG1793	dna ligase
C798_14185	COG1201	RNA secondary structure unwinding
C798_14195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C798_14200	COG0412	Dienelactone hydrolase
C798_14205	COG3501	Rhs element vgr protein
C798_14235	COG0322	excinuclease ABC activity
C798_14245	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
C798_14250	COG0028	Belongs to the TPP enzyme family
C798_14265	COG0693	protein deglycase activity
C798_14285	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
C798_14315	COG1640	4-alpha-glucanotransferase
C798_14320	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
C798_14330	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
C798_14335	COG0297	glycogen (starch) synthase activity
C798_14350	COG3604	Transcriptional regulator
C798_14365	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C798_14370	COG4953	penicillin-binding protein 1C
C798_14375	COG2373	Large extracellular alpha-helical protein
C798_14395	COG4302	ethanolamine ammonia-lyase activity
C798_14400	COG4303	Ethanolamine ammonia lyase large subunit
C798_14410	COG0531	amino acid
C798_14415	COG2207	Transcriptional regulator
C798_14425	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
C798_14450	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_14455	COG1116	anion transmembrane transporter activity
C798_14455	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_14465	COG0642	Histidine kinase
C798_14475	COG2264	protein methyltransferase activity
C798_14485	COG1741	Belongs to the pirin family
C798_14490	COG1741	Belongs to the pirin family
C798_14500	COG0583	DNA-binding transcription factor activity
C798_14510	COG3550	peptidyl-serine autophosphorylation
C798_14520	COG2814	Major facilitator Superfamily
C798_14530	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C798_14535	COG0671	phosphoesterase, PA-phosphatase related
C798_14545	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C798_14560	COG0523	cobalamin synthesis protein
C798_14565	COG1469	GTP cyclohydrolase I activity
C798_14585	COG1024	Enoyl-CoA hydratase
C798_14590	COG1960	acyl-CoA dehydrogenase activity
C798_14600	COG3706	GGDEF domain
C798_14600	COG5001	Diguanylate cyclase
C798_14600	COG2203	Gaf domain
C798_14600	COG4251	negative regulation of phosphorylation
C798_14610	COG0583	DNA-binding transcription factor activity
C798_14630	COG0625	glutathione transferase activity
C798_14645	COG0436	Aminotransferase
C798_14685	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C798_14695	COG2197	response regulator
C798_14700	COG4585	Histidine kinase
C798_14705	COG3852	Histidine kinase
C798_14710	COG0567	Dehydrogenase, E1 component
C798_14715	COG0840	transmembrane signaling receptor activity
C798_14730	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C798_14745	COG1126	abc transporter atp-binding protein
C798_14760	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C798_14775	COG1960	acyl-CoA dehydrogenase activity
C798_14780	COG1960	acyl-CoA dehydrogenase activity
C798_14790	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
C798_14800	COG0633	Ferredoxin
C798_14820	COG1028	Short-chain dehydrogenase reductase Sdr
C798_14825	COG1960	acyl-CoA dehydrogenase activity
C798_14830	COG1960	acyl-CoA dehydrogenase activity
C798_14835	COG1024	Enoyl-CoA hydratase
C798_14850	COG0508	dehydrogenase complex catalyzes the overall conversion of
C798_14855	COG0508	dehydrogenase complex catalyzes the overall conversion of
C798_14860	COG0022	dehydrogenase e1 component
C798_14865	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
C798_14875	COG4638	Rieske (2fe-2S)
C798_14880	COG1028	Short-chain dehydrogenase reductase Sdr
C798_14885	COG2124	cytochrome p450
C798_14895	COG1960	acyl-CoA dehydrogenase activity
C798_14900	COG1960	acyl-CoA dehydrogenase activity
C798_14905	COG2030	dehydratase
C798_14910	COG1024	Enoyl-CoA hydratase
C798_14915	COG1960	acyl-CoA dehydrogenase activity
C798_14920	COG1960	acyl-CoA dehydrogenase activity
C798_14925	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_14930	COG1028	Short-chain dehydrogenase reductase Sdr
C798_14935	COG1024	Enoyl-CoA hydratase
C798_14940	COG1024	Enoyl-CoA hydratase
C798_14945	COG1024	Enoyl-CoA hydratase
C798_14950	COG0183	Belongs to the thiolase family
C798_14960	COG1960	acyl-CoA dehydrogenase activity
C798_14970	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_14980	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
C798_15000	COG0300	oxidoreductase activity
C798_15015	COG0183	Belongs to the thiolase family
C798_15020	COG1024	Enoyl-CoA hydratase
C798_15025	COG1024	Enoyl-CoA hydratase
C798_15040	COG0183	Belongs to the thiolase family
C798_15050	COG1024	Enoyl-CoA hydratase
C798_15055	COG1773	rubredoxin
C798_15065	COG0583	DNA-binding transcription factor activity
C798_15070	COG1028	Short-chain dehydrogenase reductase Sdr
C798_15075	COG1414	Transcriptional regulator
C798_15090	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_15115	COG2086	electron transfer activity
C798_15120	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
C798_15125	COG1960	acyl-CoA dehydrogenase activity
C798_15130	COG2301	Belongs to the HpcH HpaI aldolase family
C798_15135	COG0302	gtp cyclohydrolase
C798_15140	COG1028	Short-chain dehydrogenase reductase Sdr
C798_15150	COG1028	Short-chain dehydrogenase reductase Sdr
C798_15170	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C798_15185	COG2124	cytochrome p450
C798_15195	COG4447	cellulose binding
C798_15215	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
C798_15220	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
C798_15225	COG0740	serine-type endopeptidase activity
C798_15230	COG0544	peptidyl-prolyl cis-trans isomerase activity
C798_15235	COG3045	CreA protein
C798_15280	COG1562	ergosterol biosynthetic process
C798_15300	COG1304	FMN binding
C798_15310	COG0084	hydrolase, TatD family'
C798_15315	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
C798_15320	COG4191	Histidine kinase
C798_15330	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
C798_15335	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
C798_15360	COG3511	phospholipase C
C798_15365	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
C798_15370	COG0848	biopolymer transport protein
C798_15375	COG0811	peptide transport
C798_15385	COG1609	Transcriptional regulator
C798_15395	COG1175	transmembrane transport
C798_15400	COG0395	ABC-type sugar transport system, permease component
C798_15415	COG1301	dicarboxylic acid transport
C798_15420	COG0840	transmembrane signaling receptor activity
C798_15440	COG0583	DNA-binding transcription factor activity
C798_15455	COG2814	Major facilitator Superfamily
C798_15460	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
C798_15520	COG2205	protein histidine kinase activity
C798_15520	COG0784	Response regulator, receiver
C798_15535	COG1492	cobalamin metabolic process
C798_15555	COG0778	Nitroreductase
C798_15595	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
C798_15620	COG3411	Ferredoxin
C798_15665	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C798_15675	COG0633	Ferredoxin
C798_15675	COG3217	Mosc domain protein beta barrel domain protein
C798_15685	COG1607	acyl-coa hydrolase
C798_15690	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C798_15730	COG3052	prosthetic group binding
C798_15750	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
C798_15755	COG1802	Transcriptional regulator
C798_15760	COG0564	pseudouridine synthase activity
C798_15765	COG3550	peptidyl-serine autophosphorylation
C798_15840	COG1566	PFAM secretion protein HlyD family protein
C798_15845	COG2814	Major facilitator Superfamily
C798_15850	COG0583	DNA-binding transcription factor activity
C798_15855	COG0667	Aldo Keto reductase
C798_15880	COG3501	Rhs element vgr protein
C798_15895	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
C798_15900	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
C798_15915	COG0667	Aldo Keto reductase
C798_15925	COG2824	Alkylphosphonate utilization operon protein PhnA
C798_15935	COG0672	)-iron permease
C798_15940	COG4633	Protein conserved in bacteria
C798_15985	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
C798_15990	COG0148	phosphopyruvate hydratase activity
C798_15995	COG0504	CTP synthase activity
C798_16000	COG0596	Alpha beta hydrolase
C798_16010	COG0084	hydrolase, TatD family'
C798_16020	COG1136	(ABC) transporter
C798_16025	COG4591	ABC-type transport system involved in lipoprotein release permease component
C798_16030	COG0210	DNA helicase
C798_16040	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
C798_16065	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
C798_16090	COG0583	DNA-binding transcription factor activity
C798_16095	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
C798_16125	COG1960	acyl-CoA dehydrogenase activity
C798_16130	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
C798_16135	COG0583	DNA-binding transcription factor activity
C798_16145	COG0300	oxidoreductase activity
C798_16160	COG3328	transposase activity
C798_16170	COG0840	transmembrane signaling receptor activity
C798_16210	COG1960	acyl-CoA dehydrogenase activity
C798_16225	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C798_16240	COG2072	flavoprotein involved in K transport
C798_16250	COG0438	transferase activity, transferring glycosyl groups
C798_16255	COG2144	transferase activity, transferring acyl groups
C798_16280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C798_16285	COG1538	Outer membrane efflux protein
C798_16290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_16295	COG2274	protein secretion by the type I secretion system
C798_16345	COG3733	amine oxidase
C798_16355	COG1252	NADH dehydrogenase
C798_16365	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
C798_16385	COG0583	DNA-binding transcription factor activity
C798_16390	COG1346	cytolysis
C798_16395	COG1380	Effector of murein hydrolase LrgA
C798_16400	COG0390	transport system, permease component
C798_16405	COG1116	anion transmembrane transporter activity
C798_16415	COG1881	PFAM PEBP family protein
C798_16430	COG1285	pathogenesis
C798_16435	COG1742	UPF0060 membrane protein
C798_16445	COG2223	nitrite transmembrane transporter activity
C798_16450	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C798_16455	COG2146	nitrite reductase [NAD(P)H] activity
C798_16460	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C798_16465	COG0243	molybdopterin cofactor binding
C798_16500	COG0840	transmembrane signaling receptor activity
C798_16505	COG0840	transmembrane signaling receptor activity
C798_16515	COG3064	Membrane
C798_16525	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
C798_16535	COG2959	enzyme of heme biosynthesis
C798_16545	COG0181	hydroxymethylbilane synthase activity
C798_16550	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
C798_16565	COG0165	Argininosuccinate lyase
C798_16605	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C798_16615	COG0583	DNA-binding transcription factor activity
C798_16620	COG2814	Major facilitator Superfamily
C798_16630	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
C798_16635	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
C798_16640	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
C798_16645	COG0330	HflC and HflK could
C798_16650	COG0330	HflC and HflK could
C798_16655	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C798_16660	COG1923	regulation of RNA biosynthetic process
C798_16665	COG1160	GTP binding
C798_16680	COG0124	histidyl-tRNA synthetase
C798_16685	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
C798_16695	COG0820	rRNA (adenine-C2-)-methyltransferase activity
C798_16700	COG0105	UTP biosynthetic process
C798_16705	COG0670	Belongs to the BI1 family
C798_16710	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
C798_16715	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C798_16720	COG4942	peptidase
C798_16720	COG1388	LysM domain
C798_16725	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
C798_16730	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
C798_16740	COG1199	ATP-dependent helicase activity
C798_16755	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
C798_16760	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C798_16765	COG0508	dehydrogenase complex catalyzes the overall conversion of
C798_16770	COG0567	Dehydrogenase, E1 component
C798_16775	COG0372	Belongs to the citrate synthase family
C798_16780	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
C798_16785	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C798_16790	COG1053	succinate dehydrogenase
C798_16805	COG2188	Transcriptional regulator
C798_16810	COG0039	L-malate dehydrogenase activity
C798_16825	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
C798_16835	COG0835	chemotaxis
C798_16845	COG0745	RESPONSE REGULATOR receiver
C798_16855	COG1360	Flagellar Motor Protein
C798_16875	COG0626	cystathionine gamma-synthase activity
C798_16885	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
C798_16895	COG1028	Short-chain dehydrogenase reductase Sdr
C798_16900	COG3243	poly(R)-hydroxyalkanoic acid synthase
C798_16930	COG0564	pseudouridine synthase activity
C798_16945	COG2814	Major facilitator Superfamily
C798_16960	COG3022	response to hydroperoxide
C798_16975	COG0436	Aminotransferase
C798_16980	COG0625	glutathione transferase activity
C798_16985	COG5001	Diguanylate cyclase
C798_16985	COG5002	protein histidine kinase activity
C798_16985	COG3447	MASE1 domain protein
C798_16995	COG4251	negative regulation of phosphorylation
C798_16995	COG5001	Diguanylate cyclase
C798_16995	COG2203	Gaf domain
C798_16995	COG3706	GGDEF domain
C798_17025	COG0840	transmembrane signaling receptor activity
C798_17035	COG0560	Phosphoserine phosphatase
C798_17040	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
C798_17045	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
C798_17050	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
C798_17055	COG1278	Cold shock
C798_17060	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
C798_17065	COG0583	DNA-binding transcription factor activity
C798_17075	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
C798_17095	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
C798_17100	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
C798_17105	COG0840	transmembrane signaling receptor activity
C798_17125	COG2814	Major facilitator Superfamily
C798_17190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_17200	COG4943	cyclic-guanylate-specific phosphodiesterase activity
C798_17215	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
C798_17220	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
C798_17225	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
C798_17255	COG1294	oxidase, subunit
C798_17270	COG1764	response to oxidative stress
C798_17275	COG1846	Transcriptional regulator
C798_17285	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
C798_17290	COG2186	Transcriptional regulator
C798_17295	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C798_17315	COG0583	DNA-binding transcription factor activity
C798_17320	COG0693	protein deglycase activity
C798_17335	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_17340	COG1024	Enoyl-CoA hydratase
C798_17375	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
C798_17380	COG0489	protein tyrosine kinase activity
C798_17385	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C798_17385	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C798_17395	COG2390	Transcriptional regulator
C798_17400	COG3842	ATPase activity
C798_17415	COG0395	ABC-type sugar transport system, permease component
C798_17435	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
C798_17440	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
C798_17445	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
C798_17455	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
C798_17465	COG4774	siderophore transport
C798_17470	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
C798_17475	COG0643	Histidine kinase
C798_17475	COG2198	Histidine kinase
C798_17475	COG0784	Response regulator, receiver
C798_17480	COG0583	DNA-binding transcription factor activity
C798_17485	COG0730	response to heat
C798_17490	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C798_17500	COG0175	sulfate reduction
C798_17510	COG2895	sulfate adenylyltransferase (ATP) activity
C798_17525	COG0795	lipopolysaccharide-transporting ATPase activity
C798_17530	COG0795	lipopolysaccharide-transporting ATPase activity
C798_17535	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
C798_17545	COG1902	pentaerythritol trinitrate reductase activity
C798_17580	COG0708	Exodeoxyribonuclease III
C798_17590	COG1247	-acetyltransferase
C798_17625	COG0840	transmembrane signaling receptor activity
C798_17650	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
C798_17660	COG0583	DNA-binding transcription factor activity
C798_17665	COG0583	DNA-binding transcription factor activity
C798_17680	COG0583	DNA-binding transcription factor activity
C798_17695	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C798_17700	COG2204	response regulator
C798_17705	COG3852	Histidine kinase
C798_17710	COG0174	glutamine synthetase
C798_17720	COG2205	protein histidine kinase activity
C798_17720	COG0784	Response regulator, receiver
C798_17750	COG0583	DNA-binding transcription factor activity
C798_17760	COG2975	iron-sulfur cluster assembly
C798_17770	COG0443	Heat shock 70 kDa protein
C798_17780	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
C798_17785	COG0316	Belongs to the HesB IscA family
C798_17790	COG0822	iron-sulfur transferase activity
C798_17795	COG1104	cysteine desulfurase activity
C798_17805	COG2186	Transcriptional regulator
C798_17810	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C798_17820	COG2706	6-phosphogluconolactonase activity
C798_17825	COG2721	sulfolactate sulfo-lyase activity
C798_17830	COG2271	Major facilitator Superfamily
C798_17835	COG0701	Predicted permease
C798_17840	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
C798_17845	COG0709	Synthesizes selenophosphate from selenide and ATP
C798_17870	COG0556	nucleotide-excision repair
C798_17890	COG0583	DNA-binding transcription factor activity
C798_17905	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C798_17920	COG1136	(ABC) transporter
C798_17960	COG1473	amidohydrolase
C798_17965	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C798_17970	COG4608	Belongs to the ABC transporter superfamily
C798_17975	COG0444	Belongs to the ABC transporter superfamily
C798_17980	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C798_17990	COG0747	negative chemotaxis
C798_17995	COG0583	DNA-binding transcription factor activity
C798_18045	COG2515	1-aminocyclopropane-1-carboxylate deaminase
C798_18050	COG3047	cAMP biosynthetic process
C798_18060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C798_18095	COG3278	Belongs to the heme-copper respiratory oxidase family
C798_18105	COG2217	Heavy metal translocating P-type atpase
C798_18115	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C798_18130	COG0697	spore germination
C798_18135	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
C798_18140	COG2814	Major facilitator Superfamily
C798_18145	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C798_18160	COG0784	Response regulator, receiver
C798_18280	COG4386	tail sheath protein
C798_18395	COG1475	DNA binding
C798_18415	COG1051	belongs to the nudix hydrolase family
C798_18420	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
C798_18425	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
C798_18430	COG0167	dihydroorotate dehydrogenase activity
C798_18455	COG1434	Gram-negative-bacterium-type cell wall biogenesis
C798_18460	COG0840	transmembrane signaling receptor activity
C798_18465	COG2199	diguanylate cyclase activity
C798_18465	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
C798_18470	COG4944	Protein of unknown function (DUF1109)
C798_18475	COG1595	DNA-templated transcription, initiation
C798_18490	COG3220	belongs to the UPF0276 family
C798_18510	COG2226	methyltransferase
C798_18535	COG4774	siderophore transport
C798_18540	COG4774	siderophore transport
C798_18545	COG3128	pkhd-type hydroxylase
C798_18560	COG2233	PERMEase
C798_18575	COG2252	PERMEase
C798_18585	COG1529	Aldehyde oxidase and xanthine dehydrogenase
C798_18595	COG0402	S-adenosylhomocysteine deaminase activity
C798_18610	COG1566	PFAM secretion protein HlyD family protein
C798_18615	COG2814	Major facilitator Superfamily
C798_18620	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
C798_18630	COG1047	Peptidyl-prolyl cis-trans
C798_18635	COG2850	peptidyl-arginine hydroxylation
C798_18645	COG1234	tRNA 3'-trailer cleavage
C798_18650	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
C798_18655	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C798_18660	COG0180	Tryptophanyl-tRNA synthetase
C798_18665	COG1994	Peptidase M50
C798_18670	COG0009	L-threonylcarbamoyladenylate synthase
C798_18675	COG0501	Belongs to the peptidase M48B family
C798_18680	COG0613	PHP domain protein
C798_18685	COG0596	Alpha beta hydrolase
C798_18700	COG0626	cystathionine gamma-synthase activity
C798_18710	COG1286	toxin biosynthetic process
C798_18720	COG0285	dihydrofolate synthase activity
C798_18725	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
C798_18730	COG0159	tryptophan synthase activity
C798_18735	COG0133	tryptophan synthase activity
C798_18740	COG0135	phosphoribosylanthranilate isomerase activity
C798_18745	COG0101	tRNA pseudouridine synthase activity
C798_18760	COG0473	3-isopropylmalate dehydrogenase activity
C798_18765	COG0066	3-isopropylmalate dehydratase activity
C798_18775	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
C798_18785	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
C798_18790	COG2814	Major facilitator Superfamily
C798_18805	COG1295	ribonuclease BN
C798_18820	COG0277	FAD linked oxidase domain protein
C798_18840	COG1178	ABC-type Fe3 transport system permease component
C798_18845	COG3842	ATPase activity
C798_18850	COG3501	Rhs element vgr protein
C798_18890	COG2186	Transcriptional regulator
C798_18895	COG0583	DNA-binding transcription factor activity
C798_18900	COG4336	lyase activity
C798_18905	COG2814	Major facilitator Superfamily
C798_18915	COG0025	NhaP-type Na H and K H
C798_18920	COG3706	GGDEF domain
C798_18930	COG4251	negative regulation of phosphorylation
C798_18935	COG2197	response regulator
C798_18980	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C798_18985	COG0791	NLP P60 protein
C798_18990	COG2186	Transcriptional regulator
C798_18995	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
C798_19005	COG3842	ATPase activity
C798_19020	COG3833	ABC-type maltose transport systems, permease component
C798_19040	COG3501	Rhs element vgr protein
C798_19065	COG4269	membrane
C798_19085	COG0789	Transcriptional regulator
C798_19090	COG0667	Aldo Keto reductase
C798_19115	COG2204	response regulator
C798_19125	COG0477	Major facilitator Superfamily
C798_19130	COG0281	malic enzyme
C798_19130	COG0280	phosphate acetyltransferase
C798_19140	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
C798_19145	COG1546	Belongs to the CinA family
C798_19150	COG0284	orotidine-5'-phosphate decarboxylase activity
C798_19155	COG1704	LemA family
C798_19175	COG2027	D-alanyl-D-alanine carboxypeptidase
C798_19180	COG3706	GGDEF domain
C798_19190	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
C798_19210	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
C798_19230	COG0642	Histidine kinase
C798_19240	COG4774	siderophore transport
C798_19245	COG3128	pkhd-type hydroxylase
C798_19250	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_19260	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_19265	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_19290	COG3833	ABC-type maltose transport systems, permease component
C798_19295	COG1063	alcohol dehydrogenase
C798_19300	COG3842	ATPase activity
C798_19305	COG1917	Cupin 2, conserved barrel domain protein
C798_19305	COG4977	sequence-specific DNA binding
C798_19310	COG1070	Carbohydrate kinase
C798_19430	COG4974	Belongs to the 'phage' integrase family
C798_19445	COG3328	transposase activity
C798_19535	COG0328	RNA-DNA hybrid ribonuclease activity
C798_19545	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C798_19550	COG0741	lytic transglycosylase activity
C798_19550	COG1388	LysM domain
C798_19555	COG4172	Belongs to the ABC transporter superfamily
C798_19560	COG4239	(ABC) transporter, permease
C798_19565	COG4174	ABC transporter (Permease)
C798_19570	COG4166	transmembrane transport
C798_19580	COG0513	Belongs to the DEAD box helicase family
C798_19600	COG3008	intermembrane lipid transfer
C798_19600	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C798_19605	COG2995	paraquat-inducible protein a
C798_19610	COG2995	paraquat-inducible protein a
C798_19615	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
C798_19630	COG1262	PFAM Formylglycine-generating sulfatase enzyme
C798_19635	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
C798_19640	COG1132	(ABC) transporter
C798_19645	COG1902	pentaerythritol trinitrate reductase activity
C798_19650	COG0586	Pfam SNARE associated Golgi protein
C798_19680	COG1028	Short-chain dehydrogenase reductase Sdr
C798_19685	COG1250	3-hydroxyacyl-CoA dehydrogenase
C798_19690	COG3246	L-lysine catabolic process to acetate
C798_19715	COG2943	transferase activity, transferring hexosyl groups
C798_19715	COG3416	Protein conserved in bacteria
C798_19720	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
C798_19750	COG0717	Belongs to the dCTP deaminase family
C798_19785	COG2274	protein secretion by the type I secretion system
C798_19790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C798_19800	COG1643	Atp-dependent helicase
C798_19805	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
C798_19805	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
C798_19810	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
C798_19815	COG0612	Peptidase, M16
C798_19820	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
C798_19825	COG4651	solute:proton antiporter activity
C798_19825	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C798_19830	COG1522	sequence-specific DNA binding
C798_19870	COG0582	viral genome integration into host DNA
C798_20040	COG0583	DNA-binding transcription factor activity
C798_20060	COG0583	DNA-binding transcription factor activity
C798_20100	COG2814	Major facilitator Superfamily
C798_20115	COG4977	sequence-specific DNA binding
C798_20145	COG1595	DNA-templated transcription, initiation
C798_20165	COG0454	-acetyltransferase
C798_20200	COG0583	DNA-binding transcription factor activity
C798_20215	COG0583	DNA-binding transcription factor activity
C798_20230	COG0251	oxidation-reduction process
C798_20235	COG0583	DNA-binding transcription factor activity
C798_20245	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
C798_20255	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
C798_20260	COG0625	glutathione transferase activity
C798_20295	COG0583	DNA-binding transcription factor activity
C798_20320	COG0372	Belongs to the citrate synthase family
C798_20325	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_20330	COG1028	Short-chain dehydrogenase reductase Sdr
C798_20425	COG2831	hemolysin activation secretion protein
C798_20435	COG3328	transposase activity
C798_20475	COG0840	transmembrane signaling receptor activity
C798_20480	COG0431	NADPH-dependent FMN reductase
C798_20495	COG0640	Transcriptional regulator
C798_20520	COG0583	DNA-binding transcription factor activity
C798_20525	COG1028	Short-chain dehydrogenase reductase Sdr
C798_20530	COG0840	transmembrane signaling receptor activity
C798_20540	COG0154	amidase activity
C798_20560	COG2311	Membrane
C798_20585	COG2031	fatty acid transporter
C798_20590	COG0840	transmembrane signaling receptor activity
C798_20600	COG1280	lysine exporter protein (LysE YggA)
C798_20625	COG0840	transmembrane signaling receptor activity
C798_20645	COG5001	Diguanylate cyclase
C798_20645	COG3706	GGDEF domain
C798_20645	COG4251	negative regulation of phosphorylation
C798_20645	COG2203	Gaf domain
C798_20655	COG0308	aminopeptidase N
C798_20675	COG0697	spore germination
C798_20680	COG0433	COG0433 Predicted ATPase
C798_20685	COG0217	transcriptional regulatory protein
C798_20690	COG0151	Belongs to the GarS family
C798_20695	COG0668	transmembrane transport
C798_20700	COG0408	coproporphyrinogen oxidase activity
C798_20705	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
C798_20710	COG0799	negative regulation of ribosome biogenesis
C798_20715	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
C798_20720	COG0424	maF-like protein
C798_20725	COG1530	ribonuclease E activity
C798_20735	COG1132	(ABC) transporter
C798_20745	COG1442	glycosyl transferase family 8
C798_20775	COG1741	Belongs to the pirin family
C798_20780	COG0583	DNA-binding transcription factor activity
C798_20785	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
C798_20790	COG0513	Belongs to the DEAD box helicase family
C798_20805	COG0837	glucose binding
C798_20805	COG1737	Transcriptional regulator
C798_20815	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
C798_20825	COG0436	Aminotransferase
C798_20830	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
C798_20835	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
C798_20855	COG2814	Major facilitator Superfamily
C798_20860	COG2771	luxR family
C798_20875	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
C798_20880	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
C798_20885	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
C798_20895	COG0779	Required for maturation of 30S ribosomal subunits
C798_20900	COG1187	pseudouridine synthase activity
C798_20905	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
C798_20915	COG0069	glutamate synthase activity
C798_20920	COG0425	Belongs to the sulfur carrier protein TusA family
C798_20925	COG0494	nUDIX hydrolase
C798_20930	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
C798_20940	COG0584	glycerophosphoryl diester phosphodiesterase
C798_20955	COG3279	Response regulator of the LytR AlgR family
C798_20960	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
C798_20980	COG2233	PERMEase
C798_20985	COG2329	Antibiotic biosynthesis monooxygenase
C798_21000	COG2925	Exonuclease
C798_21010	COG1695	Transcriptional regulator
C798_21025	COG2321	neutral zinc metallopeptidase
C798_21040	COG2223	nitrite transmembrane transporter activity
C798_21045	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
C798_21055	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
C798_21060	COG2181	nitrate reductase activity
C798_21065	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C798_21070	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
C798_21075	COG3850	Histidine kinase
C798_21080	COG2197	response regulator
C798_21085	COG2501	S4 domain
C798_21120	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C798_21120	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C798_21145	COG1129	ABC transporter
C798_21170	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
C798_21175	COG4638	Rieske (2fe-2S)
C798_21230	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
C798_21245	COG0840	transmembrane signaling receptor activity
C798_21255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_21265	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_21270	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C798_21275	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
C798_21285	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
C798_21290	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
C798_21295	COG3706	GGDEF domain
C798_21305	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
C798_21315	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
C798_21325	COG0776	regulation of translation
C798_21335	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
C798_21350	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
C798_21365	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
C798_21370	COG0546	phosphoglycolate phosphatase activity
C798_21400	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C798_21405	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C798_21430	COG2986	histidine ammonia-lyase
C798_21465	COG1028	Short-chain dehydrogenase reductase Sdr
C798_21470	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C798_21495	COG3485	protocatechuate 3,4-dioxygenase
C798_21500	COG0583	DNA-binding transcription factor activity
C798_21515	COG3046	protein related to deoxyribodipyrimidine photolyase
C798_21520	COG2204	response regulator
C798_21525	COG2205	protein histidine kinase activity
C798_21525	COG0784	Response regulator, receiver
C798_21535	COG2205	protein histidine kinase activity
C798_21535	COG3437	response regulator, receiver
C798_21535	COG4999	Histidine kinase
C798_21535	COG3850	Histidine kinase
C798_21545	COG0835	chemotaxis
C798_21545	COG0784	Response regulator, receiver
C798_21555	COG4943	cyclic-guanylate-specific phosphodiesterase activity
C798_21560	COG0840	transmembrane signaling receptor activity
C798_21575	COG4566	intracellular signal transduction
C798_21615	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C798_21625	COG1116	anion transmembrane transporter activity
C798_21635	COG1028	Short-chain dehydrogenase reductase Sdr
C798_21660	COG0840	transmembrane signaling receptor activity
C798_21670	COG0745	RESPONSE REGULATOR receiver
C798_21675	COG0784	Response regulator, receiver
C798_21685	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
C798_21690	COG0840	transmembrane signaling receptor activity
C798_21710	COG0477	Major facilitator Superfamily
C798_21735	COG1414	Transcriptional regulator
C798_21740	COG1414	Transcriptional regulator
C798_21745	COG0778	Nitroreductase
C798_21750	COG0583	DNA-binding transcription factor activity
C798_21770	COG1116	anion transmembrane transporter activity
C798_21785	COG2186	Transcriptional regulator
C798_21790	COG1024	Enoyl-CoA hydratase
C798_21830	COG0745	RESPONSE REGULATOR receiver
C798_21835	COG2205	protein histidine kinase activity
C798_21840	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
C798_21845	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
C798_21850	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
C798_21870	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C798_21875	COG2130	NADP-dependent
C798_21880	COG1309	transcriptional regulator
C798_21890	COG4977	sequence-specific DNA binding
C798_21895	COG1408	metallophosphoesterase
C798_21910	COG0583	DNA-binding transcription factor activity
C798_21920	COG0395	ABC-type sugar transport system, permease component
C798_21925	COG1175	transmembrane transport
C798_21930	COG1653	transport
C798_21935	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
C798_21940	COG0500	methyltransferase
C798_21950	COG4942	peptidase
C798_21970	COG0386	Belongs to the glutathione peroxidase family
C798_21975	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
C798_21985	COG3284	Transcriptional regulator
C798_21990	COG0583	DNA-binding transcription factor activity
C798_22010	COG1028	Short-chain dehydrogenase reductase Sdr
C798_22020	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
C798_22025	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
C798_22035	COG1301	dicarboxylic acid transport
C798_22045	COG0247	lactate metabolic process
C798_22050	COG0277	FAD linked oxidase domain protein
C798_22055	COG0277	FAD linked oxidase domain protein
C798_22060	COG0583	DNA-binding transcription factor activity
C798_22065	COG0277	FAD linked oxidase domain protein
C798_22070	COG2096	Adenosyltransferase
C798_22090	COG0142	geranyltranstransferase activity
C798_22095	COG1722	exodeoxyribonuclease VII activity
C798_22125	COG2198	Histidine kinase
C798_22125	COG0643	Histidine kinase
C798_22140	COG1773	rubredoxin
C798_22150	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
C798_22155	COG0316	Belongs to the HesB IscA family
C798_22170	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
C798_22175	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
C798_22180	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
C798_22195	COG0418	dihydroorotase activity
C798_22200	COG1126	abc transporter atp-binding protein
C798_22205	COG0765	amino acid transport
C798_22210	COG0765	amino acid transport
C798_22220	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C798_22230	COG5265	(ABC) transporter
C798_22240	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C798_22255	COG3328	transposase activity
C798_22270	COG0318	PFAM AMP-dependent synthetase and ligase
C798_22275	COG0243	molybdopterin cofactor binding
C798_22290	COG1473	amidohydrolase
C798_22330	COG0765	amino acid transport
C798_22335	COG1126	abc transporter atp-binding protein
C798_22345	COG2721	sulfolactate sulfo-lyase activity
C798_22355	COG1028	Short-chain dehydrogenase reductase Sdr
C798_22365	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
C798_22395	COG1024	Enoyl-CoA hydratase
C798_22410	COG2967	ApaG domain
C798_22415	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C798_22420	COG0546	phosphoglycolate phosphatase activity
C798_22430	COG0512	Glutamine amidotransferase of anthranilate synthase
C798_22435	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C798_22440	COG0134	indole-3-glycerol-phosphate synthase activity
C798_22445	COG1028	Short-chain dehydrogenase reductase Sdr
C798_22450	COG0583	DNA-binding transcription factor activity
C798_22455	COG0477	Major facilitator Superfamily
C798_22460	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
C798_22475	COG2226	methyltransferase
C798_22495	COG1238	metal cluster binding
C798_22500	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C798_22505	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
C798_22505	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
C798_22525	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
C798_22530	COG1660	Displays ATPase and GTPase activities
C798_22535	COG1194	a g-specific adenine glycosylase
C798_22540	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
C798_22550	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
C798_22555	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
C798_22565	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C798_22570	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
C798_22590	COG0069	glutamate synthase activity
C798_22590	COG0070	glutamate synthase
C798_22590	COG0067	glutamate synthase
C798_22600	COG0861	Integral membrane protein TerC family
C798_22610	COG0583	DNA-binding transcription factor activity
C798_22620	COG0477	Major facilitator Superfamily
C798_22625	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
C798_22635	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
C798_22650	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
C798_22675	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C798_22680	COG0840	transmembrane signaling receptor activity
C798_22690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_22700	COG2267	carboxylic ester hydrolase activity
C798_22725	COG0028	Belongs to the TPP enzyme family
C798_22745	COG1012	belongs to the aldehyde dehydrogenase family
C798_22760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C798_22765	COG0745	RESPONSE REGULATOR receiver
C798_22770	COG5002	protein histidine kinase activity
C798_22785	COG0629	single-stranded DNA binding
C798_22790	COG2814	Major facilitator Superfamily
C798_22805	COG5285	phytanoyl-CoA dioxygenase
C798_22810	COG0840	transmembrane signaling receptor activity
C798_22815	COG0840	transmembrane signaling receptor activity
C798_22830	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
C798_22840	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
C798_22845	COG1137	ATPase activity
C798_22850	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
C798_22855	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
C798_22860	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
C798_22870	COG1028	Short-chain dehydrogenase reductase Sdr
C798_22890	COG1960	acyl-CoA dehydrogenase activity
C798_22905	COG1522	sequence-specific DNA binding
C798_22915	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
C798_22940	COG1414	Transcriptional regulator
C798_22945	COG3485	protocatechuate 3,4-dioxygenase
C798_22950	COG3485	protocatechuate 3,4-dioxygenase
C798_22955	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C798_22960	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C798_22970	COG3077	Addiction module antitoxin, RelB DinJ family
C798_23000	COG0583	DNA-binding transcription factor activity
C798_23060	COG0183	Belongs to the thiolase family
C798_23065	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C798_23075	COG1414	Transcriptional regulator
C798_23085	COG0683	leucine binding
C798_23090	COG1024	Enoyl-CoA hydratase
C798_23095	COG1022	Amp-dependent synthetase and ligase
C798_23100	COG0183	Belongs to the thiolase family
C798_23135	COG1960	acyl-CoA dehydrogenase activity
C798_23150	COG0840	transmembrane signaling receptor activity
C798_23165	COG3501	Rhs element vgr protein
C798_23300	COG1944	ATP diphosphatase activity
C798_23310	COG2969	positive regulation of protein catabolic process
C798_23315	COG0625	glutathione transferase activity
C798_23320	COG2857	Cytochrome c1
C798_23325	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
C798_23330	COG0723	plastoquinol--plastocyanin reductase activity
C798_23335	COG1970	mechanosensitive ion channel activity
C798_23340	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C798_23355	COG0805	protein transport
C798_23360	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C798_23365	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C798_23375	COG0140	phosphoribosyl-ATP diphosphatase activity
C798_23380	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
C798_23385	COG0107	imidazoleglycerol-phosphate synthase activity
C798_23390	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
C798_23400	COG0131	Imidazoleglycerol-phosphate dehydratase
C798_23405	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
C798_23415	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
C798_23420	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
C798_23425	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
C798_23430	COG0271	Belongs to the BolA IbaG family
C798_23435	COG0842	Transport permease protein
C798_23440	COG1131	(ABC) transporter
C798_23455	COG2853	Lipoprotein
C798_23460	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C798_23465	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
C798_23470	COG1127	ABC transporter
C798_23475	COG0012	GTP binding
C798_23485	COG3328	transposase activity
C798_23500	COG1074	ATP-dependent DNA helicase activity
C798_23540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C798_23565	COG3550	peptidyl-serine autophosphorylation
C798_23620	COG0511	ligase activity, forming carbon-carbon bonds
C798_23625	COG0439	Biotin carboxylase
C798_23635	COG1984	allophanate hydrolase subunit 2
C798_23660	COG1012	belongs to the aldehyde dehydrogenase family
C798_23660	COG2030	dehydratase
C798_23665	COG0683	leucine binding
C798_23680	COG3396	Phenylacetate-CoA oxygenase
C798_23685	COG3460	Phenylacetate-CoA oxygenase
C798_23690	COG3396	Phenylacetate-CoA oxygenase
C798_23695	COG2151	metal-sulfur cluster biosynthetic enzyme
C798_23700	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C798_23705	COG1024	Enoyl-CoA hydratase
C798_23710	COG1250	3-hydroxyacyl-CoA dehydrogenase
C798_23715	COG2050	protein possibly involved in aromatic compounds catabolism
C798_23725	COG0183	Belongs to the thiolase family
C798_23730	COG1024	Enoyl-CoA hydratase
C798_23750	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C798_23755	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
C798_23760	COG0742	ribosomal rna small subunit methyltransferase
C798_23765	COG0612	Peptidase, M16
C798_23775	COG0612	Peptidase, M16
C798_23785	COG2884	Cell division ATP-binding protein ftsE
C798_23800	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C798_23805	COG1999	signal sequence binding
C798_23810	COG0109	protoheme IX farnesyltransferase activity
C798_23815	COG1612	heme a metabolic process
C798_23845	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
C798_23865	COG2226	methyltransferase
C798_23870	COG1040	competence protein
C798_23880	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
C798_23890	COG2984	ABC transporter substrate binding protein
C798_23910	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
C798_23925	COG0683	leucine binding
C798_23940	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
C798_23985	COG0232	Belongs to the dGTPase family. Type 2 subfamily
C798_23995	COG2183	response to ionizing radiation
C798_24000	COG0193	aminoacyl-tRNA hydrolase activity
C798_24010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C798_24045	COG4128	Pfam Zonular occludens toxin
C798_24065	COG3501	Rhs element vgr protein
C798_24080	COG0562	UDP-galactopyranose mutase
C798_24115	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
C798_24120	COG3622	Belongs to the hyi family
C798_24125	COG2271	Major facilitator Superfamily
C798_24130	COG0235	Class ii aldolase
C798_24135	COG3395	kinase activity
C798_24140	COG2084	Dehydrogenase
C798_24145	COG2186	Transcriptional regulator
C798_24165	COG2807	transmembrane transport
C798_24170	COG2207	Transcriptional regulator
C798_24175	COG3025	triphosphatase activity
C798_24195	COG0765	amino acid transport
C798_24200	COG1126	abc transporter atp-binding protein
C798_24220	COG1280	lysine exporter protein (LysE YggA)
C798_24235	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C798_24240	COG1609	Transcriptional regulator
C798_24245	COG1953	Uracil, thiamine, allantoin
C798_24280	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C798_24305	COG3093	addiction module antidote protein HigA
C798_24315	COG0850	regulation of cytokinetic process
C798_24325	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
C798_24335	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
C798_24340	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
C798_24345	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
C798_24350	COG2890	protein-(glutamine-N5) methyltransferase activity
C798_24360	COG1858	cytochrome C peroxidase
C798_24365	COG3186	Phenylalanine-4-hydroxylase
C798_24375	COG0617	tRNA 3'-terminal CCA addition
C798_24395	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
C798_24405	COG1950	PFAM Membrane protein of
C798_24410	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
C798_24415	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
C798_24425	COG1560	Kdo2-lipid A biosynthetic process
C798_24430	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
C798_24440	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C798_24450	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
C798_24470	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
C798_24480	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
C798_24500	COG2945	thiolester hydrolase activity
C798_24505	COG1686	Belongs to the peptidase S11 family
C798_24510	COG3634	alkyl hydroperoxide reductase activity
C798_24515	COG0450	alkyl hydroperoxide reductase
C798_24520	COG0824	Thioesterase
C798_24535	COG0583	DNA-binding transcription factor activity
C798_24540	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
C798_24545	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C798_24555	COG0252	asparaginase activity
C798_24560	COG0583	DNA-binding transcription factor activity
C798_24575	COG0210	DNA helicase
C798_24620	COG0765	amino acid transport
C798_24635	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
C798_24645	COG0587	DNA-directed DNA polymerase activity
C798_24670	COG2974	May be involved in recombination
C798_24675	COG1309	transcriptional regulator
C798_24680	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
C798_24700	COG1595	DNA-templated transcription, initiation
C798_24750	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
C798_24755	COG0706	membrane insertase activity
C798_24760	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
C798_24765	COG0594	ribonuclease P activity
C798_24770	COG0230	Belongs to the bacterial ribosomal protein bL34 family
C798_24775	COG2766	serine protein kinase
C798_24780	COG2718	Belongs to the UPF0229 family
C798_24785	COG2719	SpoVR family
C798_24800	COG2271	Major facilitator Superfamily
C798_24805	COG0583	DNA-binding transcription factor activity
C798_24835	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
C798_24840	COG0300	oxidoreductase activity
C798_24845	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C798_24855	COG0018	arginyl-trna synthetase
C798_24860	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
C798_24865	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
C798_24875	COG2326	polyphosphate kinase activity
C798_24880	COG1832	CoA-binding protein
C798_24885	COG0355	proton-transporting ATP synthase activity, rotational mechanism
C798_24890	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
C798_24895	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
C798_24900	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
C798_24905	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
C798_24910	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
C798_24920	COG0356	it plays a direct role in the translocation of protons across the membrane
C798_24930	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
C798_24940	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
C798_24950	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
C798_24980	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
C798_24995	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C798_25000	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
C798_25005	COG1088	dTDP-glucose 4,6-dehydratase activity
C798_25010	COG3959	Transketolase, thiamine diphosphate binding domain
C798_25015	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
C798_25055	COG1028	Short-chain dehydrogenase reductase Sdr
C798_25060	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
C798_25060	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
C798_25100	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
C798_25115	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C798_25120	COG0642	Histidine kinase
C798_25150	COG4680	protein conserved in bacteria
C798_25165	COG1448	Aminotransferase
C798_25170	COG0037	tRNA processing
C798_25185	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
C798_25190	COG1522	sequence-specific DNA binding
C798_25260	COG3550	peptidyl-serine autophosphorylation
C798_25405	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
C798_25455	COG1250	3-hydroxyacyl-CoA dehydrogenase
C798_25465	COG3246	L-lysine catabolic process to acetate
C798_25495	COG3707	response regulator
C798_25510	COG4770	biotin carboxylase activity
C798_25525	COG3842	ATPase activity
C798_25555	COG3842	ATPase activity
C798_25560	COG1176	ABC-type spermidine putrescine transport system, permease component I
C798_25565	COG1177	transmembrane transport
C798_25585	COG0251	oxidation-reduction process
C798_25605	COG1595	DNA-templated transcription, initiation
C798_25610	COG3712	iron ion homeostasis
C798_25620	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C798_25625	COG2423	ornithine cyclodeaminase activity
C798_25640	COG4264	IucA IucC family
C798_25645	COG4264	IucA IucC family
C798_25655	COG0019	diaminopimelate decarboxylase activity
C798_25665	COG1064	alcohol dehydrogenase
C798_25680	COG2207	Transcriptional regulator
C798_25680	COG1609	Transcriptional regulator
C798_25685	COG4213	ABC transporter substrate-binding protein
C798_25690	COG1129	ABC transporter
C798_25695	COG4214	carbohydrate transport
C798_25705	COG0129	dihydroxy-acid dehydratase activity
C798_25715	COG3706	GGDEF domain
C798_25715	COG2203	Gaf domain
C798_25715	COG5001	Diguanylate cyclase
C798_25715	COG4251	negative regulation of phosphorylation
C798_25720	COG1686	Belongs to the peptidase S11 family
C798_25775	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C798_25780	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
C798_25800	COG0583	DNA-binding transcription factor activity
C798_25825	COG4566	intracellular signal transduction
C798_25845	COG0783	Belongs to the Dps family
C798_25865	COG1335	isochorismatase
C798_25885	COG4191	Histidine kinase
C798_25890	COG2207	Transcriptional regulator
C798_25910	COG0583	DNA-binding transcription factor activity
C798_25915	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
C798_25920	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C798_25925	COG3842	ATPase activity
C798_25935	COG1840	ABC-type Fe3 transport system, periplasmic component
C798_25955	COG0840	transmembrane signaling receptor activity
C798_25960	COG2986	histidine ammonia-lyase
C798_25970	COG1301	dicarboxylic acid transport
C798_25995	COG0667	Aldo Keto reductase
C798_26000	COG2205	protein histidine kinase activity
C798_26005	COG0745	RESPONSE REGULATOR receiver
C798_26010	COG1653	transport
C798_26015	COG0583	DNA-binding transcription factor activity
C798_26025	COG3064	Membrane
C798_26030	COG1247	-acetyltransferase
C798_26045	COG2010	Cytochrome c
C798_26055	COG0640	Transcriptional regulator
C798_26075	COG0583	DNA-binding transcription factor activity
C798_26080	COG1051	belongs to the nudix hydrolase family
C798_26080	COG1056	cytidyltransferase-related domain
C798_26085	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C798_26085	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
C798_26090	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
C798_26140	COG0477	Major facilitator Superfamily
C798_26145	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
C798_26155	COG2271	Major facilitator Superfamily
C798_26185	COG2194	sulfuric ester hydrolase activity
C798_26195	COG0840	transmembrane signaling receptor activity
C798_26205	COG2814	Major facilitator Superfamily
C798_26225	COG0625	glutathione transferase activity
C798_26230	COG2271	Major facilitator Superfamily
C798_26235	COG2186	Transcriptional regulator
C798_26240	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C798_26245	COG0840	transmembrane signaling receptor activity
C798_26305	COG4221	oxidoreductase activity
C798_26310	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
C798_26315	COG2814	Major facilitator Superfamily
C798_26325	COG4191	Histidine kinase
C798_26330	COG2203	Gaf domain
C798_26330	COG4251	negative regulation of phosphorylation
C798_26330	COG3706	GGDEF domain
C798_26330	COG5001	Diguanylate cyclase
C798_26345	COG4566	intracellular signal transduction
C798_26350	COG0583	DNA-binding transcription factor activity
C798_26355	COG2910	NAD(P)H-binding
C798_26365	COG1011	Hydrolase
C798_26395	COG0252	asparaginase activity
C798_26425	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
C798_26480	COG4177	L-phenylalanine transmembrane transporter activity
C798_26505	COG0840	transmembrane signaling receptor activity
C798_26510	COG2175	clavaminate synthase activity
C798_26540	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C798_26545	COG0154	amidase activity
C798_26550	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C798_26555	COG1077	Cell shape determining protein MreB Mrl
C798_26560	COG1792	Involved in formation and maintenance of cell shape
C798_26570	COG0768	penicillin binding
C798_26575	COG0772	Belongs to the SEDS family
C798_26590	COG3107	peptidoglycan biosynthetic process
C798_26595	COG0792	nuclease activity
C798_26600	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
C798_26605	COG2823	Periplasmic or secreted lipoprotein
C798_26620	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
C798_26625	COG0708	Exodeoxyribonuclease III
C798_26635	COG2922	Belongs to the Smg family
C798_26640	COG0758	DNA mediated transformation
C798_26645	COG0242	peptide deformylase activity
C798_26660	COG1960	acyl-CoA dehydrogenase activity
C798_26670	COG3012	SEC-C Motif Domain Protein
C798_26675	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C798_26705	COG3328	transposase activity
C798_26710	COG3210	domain, Protein
C798_26710	COG3210	domain, Protein
C798_26715	COG2831	hemolysin activation secretion protein
C798_26720	COG2070	2-Nitropropane dioxygenase
C798_26735	COG2223	nitrite transmembrane transporter activity
C798_26750	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
C798_26765	COG0318	PFAM AMP-dependent synthetase and ligase
C798_26780	COG0488	(ABC) transporter
C798_26790	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
C798_26795	COG0154	amidase activity
C798_26800	COG0444	Belongs to the ABC transporter superfamily
C798_26805	COG4608	Belongs to the ABC transporter superfamily
C798_26810	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C798_26820	COG0747	negative chemotaxis
C798_26830	COG2814	Major facilitator Superfamily
C798_26845	COG3706	GGDEF domain
C798_26845	COG4251	negative regulation of phosphorylation
C798_26845	COG5001	Diguanylate cyclase
C798_26845	COG2203	Gaf domain
C798_26870	COG0411	ABC transporter
C798_26880	COG0829	nickel cation binding
C798_26885	COG0831	urea catabolic process
C798_26890	COG0832	Belongs to the urease beta subunit family
C798_26895	COG0804	urea catabolic process
C798_26900	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
C798_26905	COG0830	nickel cation binding
C798_26910	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
C798_26945	COG2823	Periplasmic or secreted lipoprotein
C798_26950	COG2204	response regulator
C798_26960	COG2205	protein histidine kinase activity
C798_26965	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C798_26970	COG2814	Major facilitator Superfamily
C798_26985	COG0302	gtp cyclohydrolase
C798_27005	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_27010	COG0765	amino acid transport
C798_27015	COG1126	abc transporter atp-binding protein
C798_27045	COG0697	spore germination
C798_27080	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
C798_27095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C798_27095	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
C798_27105	COG0523	cobalamin synthesis protein
C798_27110	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
C798_27195	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
C798_27200	COG0321	lipoyl(octanoyl) transferase activity
C798_27210	COG0583	DNA-binding transcription factor activity
C798_27215	COG2921	Belongs to the UPF0250 family
C798_27235	COG4178	(ABC) transporter
C798_27240	COG0840	transmembrane signaling receptor activity
C798_27245	COG1418	mRNA catabolic process
C798_27250	COG1132	(ABC) transporter
C798_27260	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
C798_27270	COG1192	Involved in chromosome partitioning
C798_27280	COG3040	lipid binding
C798_27285	COG0357	Ribosomal RNA small subunit methyltransferase G
C798_27290	COG0445	tRNA wobble uridine modification
C798_27300	COG1172	Belongs to the binding-protein-dependent transport system permease family
C798_27320	COG0411	ABC transporter
C798_27345	COG2982	Protein involved in outer membrane biogenesis
C798_27365	COG0121	glutamine amidotransferase