LOCUS       AB178946                2763 bp    DNA     circular VRL 05-JUN-2018
DEFINITION  Honeysuckle yellow vein virus DNA, complete genome, isolate: HY12.
ACCESSION   AB178946
VERSION     AB178946.1
KEYWORDS    .
SOURCE      Honeysuckle yellow vein virus (HYVV)
  ORGANISM  Honeysuckle yellow vein virus
            Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
REFERENCE   1
  AUTHORS   Were,H.K. and Takanami,Y.
  TITLE     Honeysuckle yellow vein mosaic virus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2763)
  AUTHORS   Were,H.K. and Takanami,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAY-2004) Contact:Yoichi Takanami Kyushu University,
            Faculty of Agriculture; 6-10-1 Hakozaki, Higashi-ku, Fukuoka,
            Fukuoka 812-8581, Japan
FEATURES             Location/Qualifiers
     source          1..2763
                     /organism="Honeysuckle yellow vein virus"
                     /mol_type="genomic DNA"
                     /isolate="HY12"
                     /db_xref="taxon:240865"
                     /clone="pHS12"
                     /country="Japan:Hyougo,Kobe Univ."
                     /note="originally submitted 'Honeysuckle yellow vein
                     mosaic virus';
                     synonym:Honeysuckle-infecting geminivirus"
     gene            137..487
                     /gene="V2"
     CDS             137..487
                     /gene="V2"
                     /codon_start=1
                     /product="V2"
                     /protein_id="BAD18937.1"
                     /translation="MWDPLLNDFPETVHGFRCMLAVKYLLLVESTYSPDTVGFDLIRD
                     LILVVRAKNYVEATCRYRDFHSRLQGTSTSELRRPVRQPCECPHCPRHKQKEIMGSTA
                     HVSEAQDVQNVQKS"
     gene            297..1070
                     /gene="V1"
     CDS             297..1070
                     /gene="V1"
                     /codon_start=1
                     /product="coat protein"
                     /protein_id="BAD18938.1"
                     /translation="MSKRPADIGIFTPAFRARRRLNFDGPYVSRASAPIALVTNKRRS
                     WAQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEKKNDVGHSGTLLCVSDITRGSGL
                     THRVGKRFCIKSVYIIGKIWMDDSIKTKNHTNNVLFWLVRDRRPGSTPYVFREAFNMF
                     ENEPSTATIKQELRDRLQVLHRFSATVTGGQYTSKEQAVIKRFWKLNHHVTYNHQEQA
                     KYENHTENALLLYMACTHASNPVYATLKIRVYFYDSVQN"
     gene            complement(1067..1471)
                     /gene="C3"
     CDS             complement(1067..1471)
                     /gene="C3"
                     /codon_start=1
                     /product="replication enhancer protein"
                     /protein_id="BAD18939.1"
                     /translation="MDSRTGDTITAAQARNGAYTWTVPNPLYFKITTHAQRPFNMDQD
                     IITLQIQFNHNLRNQLHIHKCFLSFKIWTRLHPQTLHFLRVFRTQVLKYIDNLGVISI
                     NNVIRAVDHVLYNVFEGTEYVQQFTDIKFKLY"
     gene            complement(1212..1619)
                     /gene="C2"
     CDS             complement(1212..1619)
                     /gene="C2"
                     /codon_start=1
                     /product="transcriptional trans-activator protein"
                     /protein_id="BAD18940.1"
                     /translation="MQPSSPSTAHSTQVPIKVRHRSEKRRAPRRRRIDLNCGCSIYVA
                     LGCANHGFTHRGHHHCSSGKEWRVYLDSAQSPIFQNHDTRATAIQHGSGYNNFTDTIQ
                     PQPQESTAHTQVLPLFQDLDSLTSSDFAFLEGI"
     gene            complement(1519..2610)
                     /gene="C1"
     CDS             complement(1519..2610)
                     /gene="C1"
                     /codon_start=1
                     /product="replication-associated protein"
                     /protein_id="BAD18941.1"
                     /translation="MAPPKRFKINSKNYFLTYPHCSLTKEEALSQIQALETPTNKLFI
                     RICRELHEDGSPHLHVLIQFEGKYQCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKT
                     YMEKDGDVVDYGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALSILREKAPKDFVL
                     QFHNLNSNLDGLFSPPLEESVCPFLSSSFDRVPEELEEWAAENVRDSAARPWRPMSIV
                     IEGDSRTGKTMWARSLSPHHNYLCGHLDLSPKVYSNSAWYNVIDDVDPHYLKHFKEFM
                     GAQRDWQSNTKYGKPIQIKGGIPTVFLCNPGPTSSYTEYLDEDKNAALKAWAIKNATF
                     VTLYGPLYSGTHQGATQIREEESTSPEED"
     gene            complement(2160..2453)
                     /gene="C4"
     CDS             complement(2160..2453)
                     /gene="C4"
                     /codon_start=1
                     /product="C4"
                     /protein_id="BAD18942.1"
                     /translation="MGALISTSSSSSKGNTSARINDSSTSYPQLGQHISIRTFRELRA
                     HQTSRPTWRKTETSLIMEFSRSMEDQLEEVANLPTTHMPRQSTQALNHRPCLY"
ORIGIN      
        1 accggatggc cgccgccgaa atttacgtgg ggcccaccat gtcggccaat agagttcgtg
       61 ccttgaaagt tagataagtg gatgttgacg tcacttttgt ctttatatat gtcagcccta
      121 attttaaggg ttaaagatgt gggatccttt acttaatgat ttccctgaaa ccgtacacgg
      181 ttttaggtgt atgttagcgg ttaaatacct tcttctcgtt gagtcaacat actctccgga
      241 tacggtgggt ttcgatttga tacgtgatct tatactcgtt gttcgtgcga agaattatgt
      301 cgaagcgacc tgcagatata gggattttca ctcccgcctt cagggcacgt cgacgtctga
      361 acttcgacgg cccgtacgtc agccgtgcga gtgcccccat tgccctcgtc acaaacaaaa
      421 ggagatcatg ggctcaacgg cccatgtatc ggaagcccag gatgtacaga atgtacagaa
      481 gtcctgatgt tcccaagggg tgtgaaggtc cgtgtaaggt acagtcattt gagaagaaga
      541 atgatgttgg gcattctggt actctgctct gtgtttctga tatcactcgt ggtagtggac
      601 ttactcatcg tgttgggaag agattttgta taaaatctgt ttatattatt ggtaaaatct
      661 ggatggatga tagtattaag acgaagaatc acactaacaa cgtgttattc tggttagtta
      721 gggatagacg tcctggttca actccttatg tattccgaga ggcattcaat atgtttgaaa
      781 atgaacccag tacagccact attaaacagg agttgagaga tcgtttgcag gtgttacatc
      841 ggttcagtgc gactgttaca ggtggacaat atacgtctaa ggaacaagct gtcatcaaga
      901 ggttctggaa gttgaatcat catgtcactt ataatcatca ggagcaagct aaatatgaga
      961 accatactga aaatgctttg ttattgtata tggcgtgtac tcatgccagt aatccagtgt
     1021 atgccacatt aaaaatcaga gtgtatttct acgattcagt acaaaattaa taaagcttaa
     1081 attttatatc tgtaaattgt tgtacatatt cagttccttc gaatacatta tacagtacat
     1141 gatctactgc tctaattaca ttgttaattg atattacacc caaattatct atgtacttca
     1201 acacttgagt cctaaatacc ctcaagaaat gcaaagtctg aggatgtaag cgagtccaaa
     1261 tcttgaaaga gaggaagcac ttgtgtatgt gcagttgatt cctgaggttg tggttgaatt
     1321 gtatctgtaa agttattata tcctgatcca tgttgaatgg ccgttgcgcg tgtgtcgtga
     1381 ttttgaaata taggggattg ggcactgtcc aggtatacgc gccattcctt gcctgagctg
     1441 cagtgatggt gtcccctgtg cgtgaatcca tgatttgcac accccaatgc gacgtaaata
     1501 gaacacccgc agttcagatc aatcctcctc cggcgaggtg ctctcctctt ctctgatctg
     1561 tgtcgcacct tgatgggtac ctgagtagag tgggccgtag agggtgacga aggttgcatt
     1621 tttaattgcc caggctttta gggcagcatt cttgtcctcg tctaaatact cggtgtatga
     1681 tgacgttggg cctggattgc agaggaagac tgttgggata cctcctttaa tttgaattgg
     1741 tttcccgtac ttggtgttgc tttgccagtc cctttgggcc cccatgaatt ctttaaagtg
     1801 ctttaggtag tggggatcca cgtcatcaat cacgttgtac caggcgctgt tgctgtaaac
     1861 cttggggctt aagtcaagat ggccgcaaag gtaattgtga tgtgggctca atgacctggc
     1921 ccacatggtc ttccctgtcc tgctgtcccc ctcgatgaca atactcatgg gcctccacgg
     1981 ccgcgcagcg gaatccctga cgttctcggc agcccattcc tcgagttctt ccggaactcg
     2041 atcaaatgaa gaagaaagaa aaggacaaac agattcctcc aacggaggac taaaaagccc
     2101 atctaaatta ctatttaaat tatgaaattg taaaacaaaa tctttgggag ctttctccct
     2161 taatatagac aaggccgatg atttagagcc tgagttgatt gcctcggcat atgcgtcgtt
     2221 ggcagattgg caacctcctc tagctgatct tccatcgacc tggaaaactc cataatcaac
     2281 gacgtctccg tctttctcca tgtaggtctt gacgtctgat gagctcttag ctccctgaat
     2341 gttcggatgg aaatgtgctg acctagttgg ggatacgagg tcgaagaatc gttgattcgt
     2401 gcactggtat ttcccttcga actggatgag gacgtggaga tgagggctcc catcttcgtg
     2461 tagctctctg caaattctga taaacagttt gttggttggt gtttctagtg cttgaatctg
     2521 ggaaagggct tcttctttgg ttagagagca gtgtgggtat gtgaggaaat aatttttgct
     2581 atttatttta aaacgttttg gtggtgccat atttacaaat atgcccttgt accccgattc
     2641 ggagagaaat cttctttgca gtcaatcggt gtaatggggt acaatatata ctccttcatc
     2701 tttttaattt tgaatttcaa aattcaaaat tcaaattggt aaagcggcca tccgtataat
     2761 att
//