locus-tag class description Ilyop_0003 PF02463 RecF/RecN/SMC N terminal domain Ilyop_0006 PF01751 Toprim domain Ilyop_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0006 PF00986 DNA gyrase B subunit, carboxyl terminus Ilyop_0006 PF00204 DNA gyrase B Ilyop_0007 PF03989 DNA gyrase C-terminal domain, beta-propeller Ilyop_0007 PF00521 DNA gyrase/topoisomerase IV, subunit A Ilyop_0011 PF01409 tRNA synthetases class II core domain (F) Ilyop_0011 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Ilyop_0012 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Ilyop_0012 PF01588 Putative tRNA binding domain Ilyop_0012 PF03147 Ferredoxin-fold anticodon binding domain Ilyop_0012 PF03484 tRNA synthetase B5 domain Ilyop_0012 PF03483 B3/4 domain Ilyop_0013 PF02638 Glycosyl hydrolase-like 10 Ilyop_0014 PF03315 Serine dehydratase beta chain Ilyop_0014 PF03313 Serine dehydratase alpha chain Ilyop_0015 PF01195 Peptidyl-tRNA hydrolase Ilyop_0016 PF00230 Major intrinsic protein Ilyop_0017 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ilyop_0017 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ilyop_0018 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ilyop_0018 PF13237 4Fe-4S dicluster domain Ilyop_0018 PF10531 SLBB domain Ilyop_0018 PF13375 RnfC Barrel sandwich hybrid domain Ilyop_0019 PF03116 NQR2, RnfD, RnfE family Ilyop_0020 PF04205 FMN-binding domain Ilyop_0021 PF02508 Rnf-Nqr subunit, membrane protein Ilyop_0022 PF02508 Rnf-Nqr subunit, membrane protein Ilyop_0023 PF04060 Putative Fe-S cluster Ilyop_0023 PF13187 4Fe-4S dicluster domain Ilyop_0023 PF00037 4Fe-4S binding domain Ilyop_0028 PF03553 Na+/H+ antiporter family Ilyop_0029 PF01042 Endoribonuclease L-PSP Ilyop_0031 PF02447 GntP family permease Ilyop_0032 PF00849 RNA pseudouridylate synthase Ilyop_0032 PF01479 S4 domain Ilyop_0033 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ilyop_0033 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ilyop_0034 PF00162 Phosphoglycerate kinase Ilyop_0035 PF02872 5'-nucleotidase, C-terminal domain Ilyop_0035 PF00149 Calcineurin-like phosphoesterase Ilyop_0038 PF00535 Glycosyl transferase family 2 Ilyop_0040 PF00301 Rubredoxin Ilyop_0041 PF00301 Rubredoxin Ilyop_0042 PF00301 Rubredoxin Ilyop_0043 PF02915 Rubrerythrin Ilyop_0044 PF00210 Ferritin-like domain Ilyop_0047 PF01416 tRNA pseudouridine synthase Ilyop_0048 PF09383 NIL domain Ilyop_0048 PF00005 ABC transporter Ilyop_0049 PF03649 Uncharacterised protein family (UPF0014) Ilyop_0051 PF03928 Haem-degrading Ilyop_0055 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0057 PF03466 LysR substrate binding domain Ilyop_0057 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ilyop_0058 PF00106 short chain dehydrogenase Ilyop_0062 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0065 PF04231 Endonuclease I Ilyop_0066 PF01726 LexA DNA binding domain Ilyop_0066 PF00717 Peptidase S24-like Ilyop_0067 PF00817 impB/mucB/samB family Ilyop_0067 PF11799 impB/mucB/samB family C-terminal domain Ilyop_0071 PF03737 Aldolase/RraA Ilyop_0072 PF03616 Sodium/glutamate symporter Ilyop_0073 PF08666 SAF domain Ilyop_0073 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Ilyop_0074 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Ilyop_0075 PF03812 2-keto-3-deoxygluconate permease Ilyop_0076 PF17042 Nucleotide-binding C-terminal domain Ilyop_0076 PF07005 Sugar-binding N-terminal domain Ilyop_0077 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Ilyop_0078 PF07729 FCD domain Ilyop_0078 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0079 PF00795 Carbon-nitrogen hydrolase Ilyop_0081 PF03480 Bacterial extracellular solute-binding protein, family 7 Ilyop_0082 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Ilyop_0083 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Ilyop_0084 PF07729 FCD domain Ilyop_0084 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0086 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ilyop_0086 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ilyop_0086 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ilyop_0087 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_0090 PF01243 Pyridoxamine 5'-phosphate oxidase Ilyop_0095 PF01638 HxlR-like helix-turn-helix Ilyop_0096 PF07687 Peptidase dimerisation domain Ilyop_0096 PF01546 Peptidase family M20/M25/M40 Ilyop_0097 PF01321 Creatinase/Prolidase N-terminal domain Ilyop_0097 PF00557 Metallopeptidase family M24 Ilyop_0099 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Ilyop_0100 PF03480 Bacterial extracellular solute-binding protein, family 7 Ilyop_0102 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0102 PF07729 FCD domain Ilyop_0103 PF01053 Cys/Met metabolism PLP-dependent enzyme Ilyop_0104 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ilyop_0106 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ilyop_0106 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ilyop_0107 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_0108 PF12592 Protein of unknown function (DUF3763) Ilyop_0108 PF17868 AAA lid domain Ilyop_0108 PF07728 AAA domain (dynein-related subfamily) Ilyop_0109 PF05762 VWA domain containing CoxE-like protein Ilyop_0110 PF00356 Bacterial regulatory proteins, lacI family Ilyop_0111 PF03450 CO dehydrogenase flavoprotein C-terminal domain Ilyop_0111 PF00941 FAD binding domain in molybdopterin dehydrogenase Ilyop_0112 PF01799 [2Fe-2S] binding domain Ilyop_0112 PF00111 2Fe-2S iron-sulfur cluster binding domain Ilyop_0113 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Ilyop_0113 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_0114 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Ilyop_0116 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Ilyop_0116 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Ilyop_0117 PF01979 Amidohydrolase family Ilyop_0118 PF00037 4Fe-4S binding domain Ilyop_0122 PF01042 Endoribonuclease L-PSP Ilyop_0123 PF00111 2Fe-2S iron-sulfur cluster binding domain Ilyop_0123 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_0123 PF01799 [2Fe-2S] binding domain Ilyop_0123 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Ilyop_0124 PF01979 Amidohydrolase family Ilyop_0125 PF01180 Dihydroorotate dehydrogenase Ilyop_0126 PF01979 Amidohydrolase family Ilyop_0127 PF07969 Amidohydrolase family Ilyop_0128 PF01546 Peptidase family M20/M25/M40 Ilyop_0128 PF07687 Peptidase dimerisation domain Ilyop_0129 PF00291 Pyridoxal-phosphate dependent enzyme Ilyop_0130 PF00860 Permease family Ilyop_0132 PF00111 2Fe-2S iron-sulfur cluster binding domain Ilyop_0132 PF01799 [2Fe-2S] binding domain Ilyop_0133 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Ilyop_0133 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_0133 PF00111 2Fe-2S iron-sulfur cluster binding domain Ilyop_0133 PF01799 [2Fe-2S] binding domain Ilyop_0138 PF02608 ABC transporter substrate-binding protein PnrA-like Ilyop_0141 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ilyop_0141 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ilyop_0142 PF05853 beta-keto acid cleavage enzyme Ilyop_0143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ilyop_0143 PF03466 LysR substrate binding domain Ilyop_0148 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Ilyop_0149 PF00154 recA bacterial DNA recombination protein Ilyop_0150 PF02631 RecX family Ilyop_0151 PF01553 Acyltransferase Ilyop_0152 PF02901 Pyruvate formate lyase-like Ilyop_0152 PF01228 Glycine radical Ilyop_0153 PF04055 Radical SAM superfamily Ilyop_0154 PF00916 Sulfate permease family Ilyop_0154 PF01740 STAS domain Ilyop_0155 PF00814 Glycoprotease family Ilyop_0162 PF00263 Bacterial type II and III secretion system protein Ilyop_0162 PF03958 Bacterial type II/III secretion system short domain Ilyop_0166 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ilyop_0167 PF08032 RNA 2'-O ribose methyltransferase substrate binding Ilyop_0167 PF00588 SpoU rRNA Methylase family Ilyop_0168 PF04542 Sigma-70 region 2 Ilyop_0168 PF08281 Sigma-70, region 4 Ilyop_0169 PF08264 Anticodon-binding domain of tRNA Ilyop_0169 PF13603 Leucyl-tRNA synthetase, Domain 2 Ilyop_0169 PF09334 tRNA synthetases class I (M) Ilyop_0169 PF00133 tRNA synthetases class I (I, L, M and V) Ilyop_0170 PF00696 Amino acid kinase family Ilyop_0170 PF01472 PUA domain Ilyop_0171 PF00171 Aldehyde dehydrogenase family Ilyop_0172 PF00471 Ribosomal protein L33 Ilyop_0174 PF00467 KOW motif Ilyop_0174 PF02357 Transcription termination factor nusG Ilyop_0175 PF03946 Ribosomal protein L11, N-terminal domain Ilyop_0175 PF00298 Ribosomal protein L11, RNA binding domain Ilyop_0176 PF00687 Ribosomal protein L1p/L10e family Ilyop_0177 PF00466 Ribosomal protein L10 Ilyop_0178 PF16320 Ribosomal protein L7/L12 dimerisation domain Ilyop_0178 PF00542 Ribosomal protein L7/L12 C-terminal domain Ilyop_0179 PF04565 RNA polymerase Rpb2, domain 3 Ilyop_0179 PF04563 RNA polymerase beta subunit Ilyop_0179 PF04561 RNA polymerase Rpb2, domain 2 Ilyop_0179 PF10385 RNA polymerase beta subunit external 1 domain Ilyop_0179 PF00562 RNA polymerase Rpb2, domain 6 Ilyop_0179 PF04560 RNA polymerase Rpb2, domain 7 Ilyop_0180 PF04983 RNA polymerase Rpb1, domain 3 Ilyop_0180 PF00623 RNA polymerase Rpb1, domain 2 Ilyop_0180 PF04998 RNA polymerase Rpb1, domain 5 Ilyop_0180 PF04997 RNA polymerase Rpb1, domain 1 Ilyop_0180 PF05000 RNA polymerase Rpb1, domain 4 Ilyop_0181 PF08340 Domain of unknown function (DUF1732) Ilyop_0181 PF03755 YicC-like family, N-terminal region Ilyop_0182 PF04025 Domain of unknown function (DUF370) Ilyop_0183 PF00625 Guanylate kinase Ilyop_0184 PF01192 RNA polymerase Rpb6 Ilyop_0185 PF02424 ApbE family Ilyop_0186 PF03030 Inorganic H+ pyrophosphatase Ilyop_0187 PF01807 CHC2 zinc finger Ilyop_0187 PF10410 DnaB-helicase binding domain of primase Ilyop_0187 PF08275 DNA primase catalytic core, N-terminal domain Ilyop_0188 PF04545 Sigma-70, region 4 Ilyop_0188 PF04539 Sigma-70 region 3 Ilyop_0188 PF04542 Sigma-70 region 2 Ilyop_0188 PF00140 Sigma-70 factor, region 1.2 Ilyop_0188 PF03979 Sigma-70 factor, region 1.1 Ilyop_0189 PF04545 Sigma-70, region 4 Ilyop_0189 PF04542 Sigma-70 region 2 Ilyop_0189 PF00140 Sigma-70 factor, region 1.2 Ilyop_0189 PF03979 Sigma-70 factor, region 1.1 Ilyop_0189 PF04539 Sigma-70 region 3 Ilyop_0190 PF01784 NIF3 (NGG1p interacting factor 3) Ilyop_0192 PF01245 Ribosomal protein L19 Ilyop_0194 PF10502 Signal peptidase, peptidase S26 Ilyop_0196 PF10397 Adenylosuccinate lyase C-terminus Ilyop_0196 PF00206 Lyase Ilyop_0198 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ilyop_0198 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ilyop_0198 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ilyop_0198 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ilyop_0199 PF01209 ubiE/COQ5 methyltransferase family Ilyop_0200 PF03899 ATP synthase I chain Ilyop_0201 PF00119 ATP synthase A chain Ilyop_0202 PF00137 ATP synthase subunit C Ilyop_0203 PF00430 ATP synthase B/B' CF(0) Ilyop_0204 PF00213 ATP synthase delta (OSCP) subunit Ilyop_0205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ilyop_0205 PF00306 ATP synthase alpha/beta chain, C terminal domain Ilyop_0205 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ilyop_0206 PF00231 ATP synthase Ilyop_0207 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ilyop_0207 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ilyop_0208 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Ilyop_0212 PF00360 Phytochrome region Ilyop_0212 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0212 PF01590 GAF domain Ilyop_0212 PF00563 EAL domain Ilyop_0213 PF01121 Dephospho-CoA kinase Ilyop_0214 PF01136 Peptidase family U32 Ilyop_0214 PF12392 Collagenase Ilyop_0216 PF02464 Competence-damaged protein Ilyop_0216 PF18146 Damage-inducible protein CinA KH domain Ilyop_0216 PF00994 Probable molybdopterin binding domain Ilyop_0217 PF07883 Cupin domain Ilyop_0219 PF02734 DAK2 domain Ilyop_0219 PF13684 Dihydroxyacetone kinase family Ilyop_0220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_0221 PF03600 Citrate transporter Ilyop_0222 PF08279 HTH domain Ilyop_0222 PF03099 Biotin/lipoate A/B protein ligase family Ilyop_0222 PF02237 Biotin protein ligase C terminal domain Ilyop_0224 PF00694 Aconitase C-terminal domain Ilyop_0224 PF00330 Aconitase family (aconitate hydratase) Ilyop_0225 PF00180 Isocitrate/isopropylmalate dehydrogenase Ilyop_0225 PF18324 Hypothetical protein TT1725 Ilyop_0226 PF01321 Creatinase/Prolidase N-terminal domain Ilyop_0226 PF00557 Metallopeptidase family M24 Ilyop_0227 PF07729 FCD domain Ilyop_0227 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0228 PF06968 Biotin and Thiamin Synthesis associated domain Ilyop_0228 PF04055 Radical SAM superfamily Ilyop_0229 PF13649 Methyltransferase domain Ilyop_0230 PF01926 50S ribosome-binding GTPase Ilyop_0230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Ilyop_0231 PF04055 Radical SAM superfamily Ilyop_0231 PF08497 Radical SAM N-terminal Ilyop_0233 PF01368 DHH family Ilyop_0233 PF02833 DHHA2 domain Ilyop_0233 PF07085 DRTGG domain Ilyop_0233 PF00571 CBS domain Ilyop_0239 PF01653 NAD-dependent DNA ligase adenylation domain Ilyop_0239 PF03120 NAD-dependent DNA ligase OB-fold domain Ilyop_0239 PF00533 BRCA1 C Terminus (BRCT) domain Ilyop_0239 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Ilyop_0239 PF12826 Helix-hairpin-helix motif Ilyop_0241 PF02810 SEC-C motif Ilyop_0241 PF07516 SecA Wing and Scaffold domain Ilyop_0241 PF01043 SecA preprotein cross-linking domain Ilyop_0241 PF07517 SecA DEAD-like domain Ilyop_0244 PF02811 PHP domain Ilyop_0245 PF05014 Nucleoside 2-deoxyribosyltransferase Ilyop_0246 PF01370 NAD dependent epimerase/dehydratase family Ilyop_0247 PF02673 Bacitracin resistance protein BacA Ilyop_0248 PF00437 Type II/IV secretion system protein Ilyop_0249 PF00482 Type II secretion system (T2SS), protein F Ilyop_0250 PF04055 Radical SAM superfamily Ilyop_0252 PF01430 Hsp33 protein Ilyop_0253 PF01557 Fumarylacetoacetate (FAA) hydrolase family Ilyop_0254 PF00474 Sodium:solute symporter family Ilyop_0255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ilyop_0255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ilyop_0255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ilyop_0255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ilyop_0257 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_0258 PF08402 TOBE domain Ilyop_0258 PF00005 ABC transporter Ilyop_0259 PF04055 Radical SAM superfamily Ilyop_0259 PF06969 HemN C-terminal domain Ilyop_0260 PF01168 Alanine racemase, N-terminal domain Ilyop_0261 PF04472 Cell division protein SepF Ilyop_0262 PF07670 Nucleoside recognition Ilyop_0266 PF01171 PP-loop family Ilyop_0267 PF01171 PP-loop family Ilyop_0268 PF00072 Response regulator receiver domain Ilyop_0268 PF00486 Transcriptional regulatory protein, C terminal Ilyop_0269 PF13188 PAS domain Ilyop_0269 PF00072 Response regulator receiver domain Ilyop_0269 PF08448 PAS fold Ilyop_0269 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_0269 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0270 PF03390 2-hydroxycarboxylate transporter family Ilyop_0272 PF01144 Coenzyme A transferase Ilyop_0275 PF02803 Thiolase, C-terminal domain Ilyop_0275 PF00108 Thiolase, N-terminal domain Ilyop_0276 PF00378 Enoyl-CoA hydratase/isomerase Ilyop_0277 PF01575 MaoC like domain Ilyop_0278 PF02770 Acyl-CoA dehydrogenase, middle domain Ilyop_0278 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Ilyop_0278 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Ilyop_0279 PF01012 Electron transfer flavoprotein domain Ilyop_0280 PF00766 Electron transfer flavoprotein FAD-binding domain Ilyop_0280 PF01012 Electron transfer flavoprotein domain Ilyop_0281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0281 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_0281 PF08448 PAS fold Ilyop_0281 PF13188 PAS domain Ilyop_0281 PF00072 Response regulator receiver domain Ilyop_0282 PF00072 Response regulator receiver domain Ilyop_0282 PF00486 Transcriptional regulatory protein, C terminal Ilyop_0285 PF01970 Tripartite tricarboxylate transporter TctA family Ilyop_0287 PF00330 Aconitase family (aconitate hydratase) Ilyop_0287 PF00694 Aconitase C-terminal domain Ilyop_0288 PF02080 TrkA-C domain Ilyop_0288 PF06826 Predicted Permease Membrane Region Ilyop_0289 PF07729 FCD domain Ilyop_0289 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0292 PF01970 Tripartite tricarboxylate transporter TctA family Ilyop_0294 PF00682 HMGL-like Ilyop_0294 PF00364 Biotin-requiring enzyme Ilyop_0294 PF02436 Conserved carboxylase domain Ilyop_0295 PF06857 Malonate decarboxylase delta subunit (MdcD) Ilyop_0296 PF03328 HpcH/HpaI aldolase/citrate lyase family Ilyop_0297 PF04223 Citrate lyase, alpha subunit (CitF) Ilyop_0299 PF00364 Biotin-requiring enzyme Ilyop_0300 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Ilyop_0301 PF02554 Carbon starvation protein CstA Ilyop_0304 PF03502 Nucleoside-specific channel-forming protein, Tsx Ilyop_0305 PF00248 Aldo/keto reductase family Ilyop_0309 PF07670 Nucleoside recognition Ilyop_0309 PF02421 Ferrous iron transport protein B Ilyop_0309 PF04023 FeoA domain Ilyop_0309 PF17910 FeoB cytosolic helical domain Ilyop_0309 PF07664 Ferrous iron transport protein B C terminus Ilyop_0316 PF04303 PrpF protein Ilyop_0319 PF01970 Tripartite tricarboxylate transporter TctA family Ilyop_0320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0320 PF00989 PAS fold Ilyop_0320 PF08447 PAS fold Ilyop_0320 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_0321 PF00072 Response regulator receiver domain Ilyop_0321 PF00196 Bacterial regulatory proteins, luxR family Ilyop_0325 PF00356 Bacterial regulatory proteins, lacI family Ilyop_0326 PF00294 pfkB family carbohydrate kinase Ilyop_0327 PF05025 RbsD / FucU transport protein family Ilyop_0328 PF00005 ABC transporter Ilyop_0329 PF02653 Branched-chain amino acid transport system / permease component Ilyop_0330 PF13407 Periplasmic binding protein domain Ilyop_0331 PF02146 Sir2 family Ilyop_0332 PF09962 Uncharacterized conserved protein (DUF2196) Ilyop_0335 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_0336 PF00005 ABC transporter Ilyop_0337 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ilyop_0338 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ilyop_0339 PF00206 Lyase Ilyop_0339 PF14698 Argininosuccinate lyase C-terminal Ilyop_0340 PF00764 Arginosuccinate synthase Ilyop_0343 PF01026 TatD related DNase Ilyop_0344 PF13847 Methyltransferase domain Ilyop_0345 PF01648 4'-phosphopantetheinyl transferase superfamily Ilyop_0349 PF00749 tRNA synthetases class I (E and Q), catalytic domain Ilyop_0350 PF00892 EamA-like transporter family Ilyop_0352 PF00072 Response regulator receiver domain Ilyop_0353 PF08240 Alcohol dehydrogenase GroES-like domain Ilyop_0353 PF00107 Zinc-binding dehydrogenase Ilyop_0354 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0354 PF00498 FHA domain Ilyop_0354 PF00563 EAL domain Ilyop_0356 PF01207 Dihydrouridine synthase (Dus) Ilyop_0357 PF01624 MutS domain I Ilyop_0357 PF00488 MutS domain V Ilyop_0357 PF05188 MutS domain II Ilyop_0357 PF05190 MutS family domain IV Ilyop_0357 PF05192 MutS domain III Ilyop_0360 PF00005 ABC transporter Ilyop_0360 PF12399 Branched-chain amino acid ATP-binding cassette transporter Ilyop_0361 PF01411 tRNA synthetases class II (A) Ilyop_0361 PF02272 DHHA1 domain Ilyop_0361 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Ilyop_0362 PF03652 Holliday junction resolvase Ilyop_0363 PF02355 Protein export membrane protein Ilyop_0363 PF07549 SecD/SecF GG Motif Ilyop_0364 PF07549 SecD/SecF GG Motif Ilyop_0364 PF02355 Protein export membrane protein Ilyop_0365 PF01168 Alanine racemase, N-terminal domain Ilyop_0365 PF00842 Alanine racemase, C-terminal domain Ilyop_0366 PF17785 PUA-like domain Ilyop_0366 PF10672 S-adenosylmethionine-dependent methyltransferase Ilyop_0370 PF05193 Peptidase M16 inactive domain Ilyop_0370 PF00675 Insulinase (Peptidase family M16) Ilyop_0371 PF00692 dUTPase Ilyop_0372 PF01098 Cell cycle protein Ilyop_0373 PF00849 RNA pseudouridylate synthase Ilyop_0378 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Ilyop_0378 PF13807 G-rich domain on putative tyrosine kinase Ilyop_0378 PF02706 Chain length determinant protein Ilyop_0379 PF13614 AAA domain Ilyop_0384 PF12704 MacB-like periplasmic core domain Ilyop_0384 PF02687 FtsX-like permease family Ilyop_0384 PF00005 ABC transporter Ilyop_0385 PF02397 Bacterial sugar transferase Ilyop_0389 PF00535 Glycosyl transferase family 2 Ilyop_0391 PF00534 Glycosyl transferases group 1 Ilyop_0391 PF09318 Glycosyl transferase 1 domain A Ilyop_0392 PF00534 Glycosyl transferases group 1 Ilyop_0392 PF13439 Glycosyltransferase Family 4 Ilyop_0393 PF06426 Serine acetyltransferase, N-terminal Ilyop_0393 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_0394 PF00535 Glycosyl transferase family 2 Ilyop_0394 PF01501 Glycosyl transferase family 8 Ilyop_0396 PF01370 NAD dependent epimerase/dehydratase family Ilyop_0397 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Ilyop_0397 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Ilyop_0397 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Ilyop_0401 PF01039 Carboxyl transferase domain Ilyop_0402 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Ilyop_0403 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0404 PF01625 Peptide methionine sulfoxide reductase Ilyop_0404 PF01641 SelR domain Ilyop_0406 PF02132 RecR protein Ilyop_0406 PF13662 Toprim domain Ilyop_0407 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Ilyop_0407 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Ilyop_0408 PF17760 UvrA interaction domain Ilyop_0408 PF17755 UvrA DNA-binding domain Ilyop_0410 PF01177 Asp/Glu/Hydantoin racemase Ilyop_0411 PF07499 RuvA, C-terminal domain Ilyop_0411 PF01330 RuvA N terminal domain Ilyop_0412 PF00483 Nucleotidyl transferase Ilyop_0412 PF01050 Mannose-6-phosphate isomerase Ilyop_0413 PF13638 PIN domain Ilyop_0413 PF02562 PhoH-like protein Ilyop_0415 PF02653 Branched-chain amino acid transport system / permease component Ilyop_0416 PF11862 Domain of unknown function (DUF3382) Ilyop_0416 PF02653 Branched-chain amino acid transport system / permease component Ilyop_0417 PF12399 Branched-chain amino acid ATP-binding cassette transporter Ilyop_0417 PF00005 ABC transporter Ilyop_0418 PF00005 ABC transporter Ilyop_0420 PF00004 ATPase family associated with various cellular activities (AAA) Ilyop_0420 PF16193 AAA C-terminal domain Ilyop_0420 PF12002 MgsA AAA+ ATPase C terminal Ilyop_0421 PF13393 Histidyl-tRNA synthetase Ilyop_0421 PF03129 Anticodon binding domain Ilyop_0422 PF02938 GAD domain Ilyop_0422 PF00152 tRNA synthetases class II (D, K and N) Ilyop_0422 PF01336 OB-fold nucleic acid binding domain Ilyop_0423 PF03485 Arginyl tRNA synthetase N terminal domain Ilyop_0423 PF05746 DALR anticodon binding domain Ilyop_0423 PF00750 tRNA synthetases class I (R) Ilyop_0424 PF03668 P-loop ATPase protein family Ilyop_0425 PF02151 UvrB/uvrC motif Ilyop_0425 PF01541 GIY-YIG catalytic domain Ilyop_0425 PF08459 UvrC Helix-hairpin-helix N-terminal Ilyop_0426 PF00072 Response regulator receiver domain Ilyop_0428 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain Ilyop_0428 PF07228 Stage II sporulation protein E (SpoIIE) Ilyop_0429 PF10688 Bacterial inner membrane protein Ilyop_0430 PF01048 Phosphorylase superfamily Ilyop_0434 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_0435 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ilyop_0436 PF00209 Sodium:neurotransmitter symporter family Ilyop_0437 PF07136 Protein of unknown function (DUF1385) Ilyop_0438 PF05230 MASE2 domain Ilyop_0438 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0440 PF00464 Serine hydroxymethyltransferase Ilyop_0441 PF17746 SfsA N-terminal OB domain Ilyop_0441 PF03749 Sugar fermentation stimulation protein RE domain Ilyop_0444 PF16198 tRNA pseudouridylate synthase B C-terminal domain Ilyop_0444 PF01509 TruB family pseudouridylate synthase (N terminal domain) Ilyop_0447 PF02734 DAK2 domain Ilyop_0447 PF02733 Dak1 domain Ilyop_0448 PF02733 Dak1 domain Ilyop_0449 PF01791 DeoC/LacD family aldolase Ilyop_0452 PF04198 Putative sugar-binding domain Ilyop_0452 PF13936 Helix-turn-helix domain Ilyop_0453 PF05036 Sporulation related domain Ilyop_0453 PF03330 Lytic transglycolase Ilyop_0454 PF10415 Fumarase C C-terminus Ilyop_0454 PF00206 Lyase Ilyop_0455 PF01926 50S ribosome-binding GTPase Ilyop_0455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Ilyop_0456 PF00753 Metallo-beta-lactamase superfamily Ilyop_0456 PF16123 Hydroxyacylglutathione hydrolase C-terminus Ilyop_0457 PF01022 Bacterial regulatory protein, arsR family Ilyop_0458 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_0459 PF03979 Sigma-70 factor, region 1.1 Ilyop_0459 PF04539 Sigma-70 region 3 Ilyop_0459 PF04542 Sigma-70 region 2 Ilyop_0459 PF04545 Sigma-70, region 4 Ilyop_0459 PF00140 Sigma-70 factor, region 1.2 Ilyop_0460 PF02075 Crossover junction endodeoxyribonuclease RuvC Ilyop_0461 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_0461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0462 PF00588 SpoU rRNA Methylase family Ilyop_0463 PF03061 Thioesterase superfamily Ilyop_0464 PF00324 Amino acid permease Ilyop_0467 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_0467 PF04324 BFD-like [2Fe-2S] binding domain Ilyop_0468 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_0468 PF04324 BFD-like [2Fe-2S] binding domain Ilyop_0469 PF01266 FAD dependent oxidoreductase Ilyop_0471 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0472 PF13556 PucR C-terminal helix-turn-helix domain Ilyop_0473 PF07702 UTRA domain Ilyop_0473 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0474 PF11975 Family 4 glycosyl hydrolase C-terminal domain Ilyop_0474 PF02056 Family 4 glycosyl hydrolase Ilyop_0475 PF00367 phosphotransferase system, EIIB Ilyop_0475 PF02378 Phosphotransferase system, EIIC Ilyop_0476 PF02595 Glycerate kinase family Ilyop_0477 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Ilyop_0478 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ilyop_0478 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ilyop_0479 PF03851 UV-endonuclease UvdE Ilyop_0481 PF04055 Radical SAM superfamily Ilyop_0481 PF18693 TRAM domain Ilyop_0481 PF00919 Uncharacterized protein family UPF0004 Ilyop_0482 PF00186 Dihydrofolate reductase Ilyop_0485 PF02272 DHHA1 domain Ilyop_0485 PF01368 DHH family Ilyop_0485 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Ilyop_0485 PF17768 RecJ OB domain Ilyop_0486 PF01871 AMMECR1 Ilyop_0486 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Ilyop_0494 PF01464 Transglycosylase SLT domain Ilyop_0495 PF08676 MutL C terminal dimerisation domain Ilyop_0495 PF01119 DNA mismatch repair protein, C-terminal domain Ilyop_0496 PF02590 Predicted SPOUT methyltransferase Ilyop_0500 PF01336 OB-fold nucleic acid binding domain Ilyop_0500 PF00152 tRNA synthetases class II (D, K and N) Ilyop_0501 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0503 PF00128 Alpha amylase, catalytic domain Ilyop_0503 PF01833 IPT/TIG domain Ilyop_0503 PF00686 Starch binding domain Ilyop_0503 PF02806 Alpha amylase, C-terminal all-beta domain Ilyop_0504 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0505 PF09297 NADH pyrophosphatase zinc ribbon domain Ilyop_0505 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Ilyop_0505 PF00293 NUDIX domain Ilyop_0506 PF13673 Acetyltransferase (GNAT) domain Ilyop_0507 PF08212 Lipocalin-like domain Ilyop_0508 PF02687 FtsX-like permease family Ilyop_0508 PF12704 MacB-like periplasmic core domain Ilyop_0509 PF00005 ABC transporter Ilyop_0510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Ilyop_0510 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Ilyop_0511 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Ilyop_0512 PF02654 Cobalamin-5-phosphate synthase Ilyop_0513 PF00300 Histidine phosphatase superfamily (branch 1) Ilyop_0514 PF02277 Phosphoribosyltransferase Ilyop_0515 PF04002 RadC-like JAB domain Ilyop_0516 PF04468 PSP1 C-terminal conserved region Ilyop_0517 PF05175 Methyltransferase small domain Ilyop_0519 PF01256 Carbohydrate kinase Ilyop_0519 PF03853 YjeF-related protein N-terminus Ilyop_0520 PF17757 UvrB interaction domain Ilyop_0520 PF02151 UvrB/uvrC motif Ilyop_0520 PF12344 Ultra-violet resistance protein B Ilyop_0520 PF00271 Helicase conserved C-terminal domain Ilyop_0520 PF04851 Type III restriction enzyme, res subunit Ilyop_0521 PF00293 NUDIX domain Ilyop_0522 PF02601 Exonuclease VII, large subunit Ilyop_0522 PF13742 OB-fold nucleic acid binding domain Ilyop_0524 PF02481 DNA recombination-mediator protein A Ilyop_0524 PF17782 DprA winged helix domain Ilyop_0525 PF01131 DNA topoisomerase Ilyop_0525 PF01751 Toprim domain Ilyop_0525 PF01396 Topoisomerase DNA binding C4 zinc finger Ilyop_0526 PF01134 Glucose inhibited division protein A Ilyop_0527 PF00589 Phage integrase family Ilyop_0527 PF02899 Phage integrase, N-terminal SAM-like domain Ilyop_0528 PF00227 Proteasome subunit Ilyop_0529 PF01926 50S ribosome-binding GTPase Ilyop_0530 PF07963 Prokaryotic N-terminal methylation motif Ilyop_0530 PF08334 Type II secretion system (T2SS), protein G Ilyop_0531 PF07963 Prokaryotic N-terminal methylation motif Ilyop_0531 PF00114 Pilin (bacterial filament) Ilyop_0535 PF02772 S-adenosylmethionine synthetase, central domain Ilyop_0535 PF00438 S-adenosylmethionine synthetase, N-terminal domain Ilyop_0535 PF02773 S-adenosylmethionine synthetase, C-terminal domain Ilyop_0536 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ilyop_0536 PF10531 SLBB domain Ilyop_0536 PF13237 4Fe-4S dicluster domain Ilyop_0536 PF13375 RnfC Barrel sandwich hybrid domain Ilyop_0537 PF03116 NQR2, RnfD, RnfE family Ilyop_0540 PF00448 SRP54-type protein, GTPase domain Ilyop_0540 PF02881 SRP54-type protein, helical bundle domain Ilyop_0541 PF01515 Phosphate acetyl/butaryl transferase Ilyop_0542 PF00871 Acetokinase family Ilyop_0543 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ilyop_0543 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ilyop_0543 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ilyop_0543 PF10371 Domain of unknown function Ilyop_0543 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_0544 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Ilyop_0545 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Ilyop_0546 PF01329 Pterin 4 alpha carbinolamine dehydratase Ilyop_0547 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase Ilyop_0548 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Ilyop_0549 PF08218 Citrate lyase ligase C-terminal domain Ilyop_0549 PF00583 Acetyltransferase (GNAT) family Ilyop_0551 PF00375 Sodium:dicarboxylate symporter family Ilyop_0552 PF01641 SelR domain Ilyop_0552 PF01625 Peptide methionine sulfoxide reductase Ilyop_0553 PF02310 B12 binding domain Ilyop_0554 PF13941 MutL protein Ilyop_0555 PF06368 Methylaspartate mutase E chain (MutE) Ilyop_0556 PF05034 Methylaspartate ammonia-lyase N-terminus Ilyop_0556 PF07476 Methylaspartate ammonia-lyase C-terminus Ilyop_0557 PF06857 Malonate decarboxylase delta subunit (MdcD) Ilyop_0558 PF03328 HpcH/HpaI aldolase/citrate lyase family Ilyop_0559 PF04223 Citrate lyase, alpha subunit (CitF) Ilyop_0561 PF01235 Sodium:alanine symporter family Ilyop_0562 PF01063 Amino-transferase class IV Ilyop_0564 PF00117 Glutamine amidotransferase class-I Ilyop_0565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ilyop_0565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ilyop_0567 PF01842 ACT domain Ilyop_0567 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ilyop_0567 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ilyop_0568 PF02576 RimP N-terminal domain Ilyop_0568 PF17384 RimP C-terminal SH3 domain Ilyop_0569 PF13184 NusA-like KH domain Ilyop_0569 PF08529 NusA N-terminal domain Ilyop_0569 PF00575 S1 RNA binding domain Ilyop_0571 PF00009 Elongation factor Tu GTP binding domain Ilyop_0571 PF04760 Translation initiation factor IF-2, N-terminal region Ilyop_0571 PF11987 Translation-initiation factor 2 Ilyop_0572 PF02033 Ribosome-binding factor A Ilyop_0573 PF01368 DHH family Ilyop_0573 PF17768 RecJ OB domain Ilyop_0573 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Ilyop_0573 PF02272 DHHA1 domain Ilyop_0574 PF05698 Bacterial trigger factor protein (TF) C-terminus Ilyop_0574 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Ilyop_0574 PF05697 Bacterial trigger factor protein (TF) Ilyop_0575 PF00574 Clp protease Ilyop_0576 PF10431 C-terminal, D2-small domain, of ClpB protein Ilyop_0576 PF06689 ClpX C4-type zinc finger Ilyop_0576 PF07724 AAA domain (Cdc48 subfamily) Ilyop_0577 PF02190 ATP-dependent protease La (LON) substrate-binding domain Ilyop_0577 PF05362 Lon protease (S16) C-terminal proteolytic domain Ilyop_0577 PF00004 ATPase family associated with various cellular activities (AAA) Ilyop_0578 PF01926 50S ribosome-binding GTPase Ilyop_0579 PF08264 Anticodon-binding domain of tRNA Ilyop_0579 PF00133 tRNA synthetases class I (I, L, M and V) Ilyop_0579 PF10458 Valyl tRNA synthetase tRNA binding arm Ilyop_0580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ilyop_0580 PF03466 LysR substrate binding domain Ilyop_0581 PF13580 SIS domain Ilyop_0584 PF02545 Maf-like protein Ilyop_0588 PF04079 Segregation and condensation complex subunit ScpB Ilyop_0589 PF00849 RNA pseudouridylate synthase Ilyop_0589 PF01479 S4 domain Ilyop_0591 PF02686 Glu-tRNAGln amidotransferase C subunit Ilyop_0592 PF01425 Amidase Ilyop_0593 PF02637 GatB domain Ilyop_0593 PF02934 GatB/GatE catalytic domain Ilyop_0596 PF07687 Peptidase dimerisation domain Ilyop_0596 PF01546 Peptidase family M20/M25/M40 Ilyop_0597 PF00291 Pyridoxal-phosphate dependent enzyme Ilyop_0598 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_0601 PF01923 Cobalamin adenosyltransferase Ilyop_0603 PF02386 Cation transport protein Ilyop_0604 PF02254 TrkA-N domain Ilyop_0604 PF02080 TrkA-C domain Ilyop_0605 PF13932 GidA associated domain Ilyop_0605 PF01134 Glucose inhibited division protein A Ilyop_0606 PF02527 rRNA small subunit methyltransferase G Ilyop_0608 PF01103 Surface antigen Ilyop_0608 PF17243 POTRA domain TamA domain 1 Ilyop_0608 PF07244 Surface antigen variable number repeat Ilyop_0610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Ilyop_0610 PF14602 Hexapeptide repeat of succinyl-transferase Ilyop_0610 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_0615 PF01252 Signal peptidase (SPase) II Ilyop_0616 PF01863 Protein of unknown function DUF45 Ilyop_0618 PF02403 Seryl-tRNA synthetase N-terminal domain Ilyop_0618 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ilyop_0620 PF01116 Fructose-bisphosphate aldolase class-II Ilyop_0622 PF00117 Glutamine amidotransferase class-I Ilyop_0622 PF06418 CTP synthase N-terminus Ilyop_0627 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ilyop_0627 PF00037 4Fe-4S binding domain Ilyop_0627 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ilyop_0628 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_0628 PF02256 Iron hydrogenase small subunit Ilyop_0628 PF00037 4Fe-4S binding domain Ilyop_0628 PF02906 Iron only hydrogenase large subunit, C-terminal domain Ilyop_0629 PF00072 Response regulator receiver domain Ilyop_0629 PF00486 Transcriptional regulatory protein, C terminal Ilyop_0630 PF00672 HAMP domain Ilyop_0630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0630 PF13426 PAS domain Ilyop_0630 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_0632 PF01432 Peptidase family M3 Ilyop_0632 PF08439 Oligopeptidase F Ilyop_0633 PF12833 Helix-turn-helix domain Ilyop_0635 PF02256 Iron hydrogenase small subunit Ilyop_0635 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_0635 PF02906 Iron only hydrogenase large subunit, C-terminal domain Ilyop_0635 PF00037 4Fe-4S binding domain Ilyop_0636 PF12804 MobA-like NTP transferase domain Ilyop_0637 PF02634 FdhD/NarQ family Ilyop_0639 PF01343 Peptidase family S49 Ilyop_0640 PF00155 Aminotransferase class I and II Ilyop_0641 PF01053 Cys/Met metabolism PLP-dependent enzyme Ilyop_0642 PF00291 Pyridoxal-phosphate dependent enzyme Ilyop_0645 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_0645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ilyop_0647 PF12801 4Fe-4S binding domain Ilyop_0647 PF04205 FMN-binding domain Ilyop_0649 PF01638 HxlR-like helix-turn-helix Ilyop_0650 PF01625 Peptide methionine sulfoxide reductase Ilyop_0651 PF01047 MarR family Ilyop_0653 PF02575 YbaB/EbfC DNA-binding family Ilyop_0655 PF00133 tRNA synthetases class I (I, L, M and V) Ilyop_0655 PF09334 tRNA synthetases class I (M) Ilyop_0655 PF01588 Putative tRNA binding domain Ilyop_0655 PF08264 Anticodon-binding domain of tRNA Ilyop_0656 PF00483 Nucleotidyl transferase Ilyop_0657 PF04794 YdjC-like protein Ilyop_0659 PF16921 Tex protein YqgF-like domain Ilyop_0659 PF17674 HHH domain Ilyop_0659 PF00575 S1 RNA binding domain Ilyop_0659 PF09371 Tex-like protein N-terminal domain Ilyop_0660 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_0660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0660 PF00989 PAS fold Ilyop_0661 PF08264 Anticodon-binding domain of tRNA Ilyop_0661 PF06827 Zinc finger found in FPG and IleRS Ilyop_0661 PF00133 tRNA synthetases class I (I, L, M and V) Ilyop_0662 PF01252 Signal peptidase (SPase) II Ilyop_0663 PF02091 Glycyl-tRNA synthetase alpha subunit Ilyop_0664 PF05746 DALR anticodon binding domain Ilyop_0664 PF02092 Glycyl-tRNA synthetase beta subunit Ilyop_0665 PF02774 Semialdehyde dehydrogenase, dimerisation domain Ilyop_0665 PF01118 Semialdehyde dehydrogenase, NAD binding domain Ilyop_0666 PF00742 Homoserine dehydrogenase Ilyop_0666 PF03447 Homoserine dehydrogenase, NAD binding domain Ilyop_0666 PF01842 ACT domain Ilyop_0667 PF00696 Amino acid kinase family Ilyop_0667 PF13840 ACT domain Ilyop_0668 PF01636 Phosphotransferase enzyme family Ilyop_0669 PF14821 Threonine synthase N terminus Ilyop_0669 PF00291 Pyridoxal-phosphate dependent enzyme Ilyop_0671 PF03717 Penicillin-binding Protein dimerisation domain Ilyop_0671 PF00905 Penicillin binding protein transpeptidase domain Ilyop_0671 PF03793 PASTA domain Ilyop_0672 PF04851 Type III restriction enzyme, res subunit Ilyop_0672 PF00271 Helicase conserved C-terminal domain Ilyop_0672 PF17764 3′ DNA-binding domain (3′BD) Ilyop_0672 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Ilyop_0672 PF18074 Primosomal protein N C-terminal domain Ilyop_0673 PF01327 Polypeptide deformylase Ilyop_0674 PF00551 Formyl transferase Ilyop_0674 PF02911 Formyl transferase, C-terminal domain Ilyop_0675 PF02629 CoA binding domain Ilyop_0675 PF06971 Putative DNA-binding protein N-terminus Ilyop_0676 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ilyop_0676 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Ilyop_0677 PF13291 ACT domain Ilyop_0678 PF00364 Biotin-requiring enzyme Ilyop_0679 PF00334 Nucleoside diphosphate kinase Ilyop_0680 PF02833 DHHA2 domain Ilyop_0680 PF00571 CBS domain Ilyop_0680 PF01368 DHH family Ilyop_0680 PF07085 DRTGG domain Ilyop_0681 PF03471 Transporter associated domain Ilyop_0681 PF00571 CBS domain Ilyop_0681 PF01595 Cyclin M transmembrane N-terminal domain Ilyop_0684 PF09297 NADH pyrophosphatase zinc ribbon domain Ilyop_0684 PF00293 NUDIX domain Ilyop_0685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Ilyop_0685 PF00437 Type II/IV secretion system protein Ilyop_0686 PF00156 Phosphoribosyl transferase domain Ilyop_0687 PF02824 TGS domain Ilyop_0687 PF04607 Region found in RelA / SpoT proteins Ilyop_0687 PF13291 ACT domain Ilyop_0688 PF01702 Queuine tRNA-ribosyltransferase Ilyop_0689 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_0689 PF00037 4Fe-4S binding domain Ilyop_0689 PF02256 Iron hydrogenase small subunit Ilyop_0689 PF02906 Iron only hydrogenase large subunit, C-terminal domain Ilyop_0690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ilyop_0690 PF00037 4Fe-4S binding domain Ilyop_0690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ilyop_0693 PF12146 Serine aminopeptidase, S33 Ilyop_0694 PF00343 Carbohydrate phosphorylase Ilyop_0696 PF00483 Nucleotidyl transferase Ilyop_0697 PF00483 Nucleotidyl transferase Ilyop_0697 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_0698 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Ilyop_0698 PF02806 Alpha amylase, C-terminal all-beta domain Ilyop_0698 PF00128 Alpha amylase, catalytic domain Ilyop_0700 PF16736 Single Cache-like Ilyop_0700 PF00989 PAS fold Ilyop_0700 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_0700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0701 PF00072 Response regulator receiver domain Ilyop_0701 PF00486 Transcriptional regulatory protein, C terminal Ilyop_0702 PF01209 ubiE/COQ5 methyltransferase family Ilyop_0709 PF13520 Amino acid permease Ilyop_0720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Ilyop_0720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Ilyop_0721 PF01734 Patatin-like phospholipase Ilyop_0722 PF01979 Amidohydrolase family Ilyop_0723 PF13382 Adenine deaminase C-terminal domain Ilyop_0723 PF01979 Amidohydrolase family Ilyop_0724 PF13416 Bacterial extracellular solute-binding protein Ilyop_0725 PF00005 ABC transporter Ilyop_0725 PF08402 TOBE domain Ilyop_0726 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_0727 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_0728 PF00356 Bacterial regulatory proteins, lacI family Ilyop_0729 PF00912 Transglycosylase Ilyop_0729 PF00905 Penicillin binding protein transpeptidase domain Ilyop_0732 PF00209 Sodium:neurotransmitter symporter family Ilyop_0734 PF02811 PHP domain Ilyop_0736 PF00871 Acetokinase family Ilyop_0737 PF06421 GTP-binding protein LepA C-terminus Ilyop_0737 PF00009 Elongation factor Tu GTP binding domain Ilyop_0737 PF00679 Elongation factor G C-terminus Ilyop_0737 PF03144 Elongation factor Tu domain 2 Ilyop_0739 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_0739 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Ilyop_0740 PF00294 pfkB family carbohydrate kinase Ilyop_0741 PF00455 DeoR C terminal sensor domain Ilyop_0741 PF08220 DeoR-like helix-turn-helix domain Ilyop_0742 PF00391 PEP-utilising enzyme, mobile domain Ilyop_0742 PF05524 PEP-utilising enzyme, N-terminal Ilyop_0742 PF02896 PEP-utilising enzyme, TIM barrel domain Ilyop_0743 PF00381 PTS HPr component phosphorylation site Ilyop_0744 PF01070 FMN-dependent dehydrogenase Ilyop_0747 PF12241 Trans-2-enoyl-CoA reductase catalytic region Ilyop_0747 PF07055 Enoyl reductase FAD binding domain Ilyop_0747 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Ilyop_0749 PF01238 Phosphomannose isomerase type I Ilyop_0750 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0750 PF07702 UTRA domain Ilyop_0751 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_0751 PF02378 Phosphotransferase system, EIIC Ilyop_0751 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Ilyop_0752 PF09261 Alpha mannosidase middle domain Ilyop_0752 PF01074 Glycosyl hydrolases family 38 N-terminal domain Ilyop_0752 PF07748 Glycosyl hydrolases family 38 C-terminal domain Ilyop_0753 PF02595 Glycerate kinase family Ilyop_0756 PF04011 LemA family Ilyop_0757 PF03631 Virulence factor BrkB Ilyop_0759 PF02308 MgtC family Ilyop_0760 PF01546 Peptidase family M20/M25/M40 Ilyop_0766 PF01029 NusB family Ilyop_0766 PF01189 16S rRNA methyltransferase RsmB/F Ilyop_0770 PF00005 ABC transporter Ilyop_0770 PF12848 ABC transporter Ilyop_0773 PF13536 Putative multidrug resistance efflux transporter Ilyop_0774 PF07883 Cupin domain Ilyop_0774 PF01381 Helix-turn-helix Ilyop_0777 PF01906 Putative heavy-metal-binding Ilyop_0778 PF01470 Pyroglutamyl peptidase Ilyop_0782 PF01022 Bacterial regulatory protein, arsR family Ilyop_0783 PF01758 Sodium Bile acid symporter family Ilyop_0784 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_0784 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ilyop_0788 PF00563 EAL domain Ilyop_0788 PF03707 Bacterial signalling protein N terminal repeat Ilyop_0788 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0789 PF00563 EAL domain Ilyop_0789 PF03707 Bacterial signalling protein N terminal repeat Ilyop_0789 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0790 PF01590 GAF domain Ilyop_0790 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0790 PF00563 EAL domain Ilyop_0790 PF00360 Phytochrome region Ilyop_0792 PF07690 Major Facilitator Superfamily Ilyop_0793 PF00484 Carbonic anhydrase Ilyop_0794 PF02272 DHHA1 domain Ilyop_0794 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Ilyop_0794 PF01411 tRNA synthetases class II (A) Ilyop_0795 PF04055 Radical SAM superfamily Ilyop_0796 PF00912 Transglycosylase Ilyop_0796 PF00905 Penicillin binding protein transpeptidase domain Ilyop_0796 PF17092 Penicillin-binding protein OB-like domain Ilyop_0797 PF07308 Protein of unknown function (DUF1456) Ilyop_0798 PF02397 Bacterial sugar transferase Ilyop_0801 PF01370 NAD dependent epimerase/dehydratase family Ilyop_0802 PF16363 GDP-mannose 4,6 dehydratase Ilyop_0803 PF13439 Glycosyltransferase Family 4 Ilyop_0803 PF00534 Glycosyl transferases group 1 Ilyop_0804 PF03062 MBOAT, membrane-bound O-acyltransferase family Ilyop_0806 PF00483 Nucleotidyl transferase Ilyop_0807 PF16363 GDP-mannose 4,6 dehydratase Ilyop_0808 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Ilyop_0809 PF16363 GDP-mannose 4,6 dehydratase Ilyop_0810 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Ilyop_0811 PF00535 Glycosyl transferase family 2 Ilyop_0811 PF01501 Glycosyl transferase family 8 Ilyop_0814 PF00535 Glycosyl transferase family 2 Ilyop_0814 PF01501 Glycosyl transferase family 8 Ilyop_0815 PF00743 Flavin-binding monooxygenase-like Ilyop_0817 PF01943 Polysaccharide biosynthesis protein Ilyop_0818 PF00534 Glycosyl transferases group 1 Ilyop_0818 PF13439 Glycosyltransferase Family 4 Ilyop_0820 PF13807 G-rich domain on putative tyrosine kinase Ilyop_0820 PF13614 AAA domain Ilyop_0820 PF02706 Chain length determinant protein Ilyop_0821 PF13614 AAA domain Ilyop_0826 PF00364 Biotin-requiring enzyme Ilyop_0826 PF00682 HMGL-like Ilyop_0826 PF02436 Conserved carboxylase domain Ilyop_0827 PF06865 Pyrimidine/purine nucleoside phosphorylase Ilyop_0828 PF01380 SIS domain Ilyop_0828 PF01418 Helix-turn-helix domain, rpiR family Ilyop_0829 PF01066 CDP-alcohol phosphatidyltransferase Ilyop_0832 PF06874 Firmicute fructose-1,6-bisphosphatase Ilyop_0834 PF00557 Metallopeptidase family M24 Ilyop_0837 PF01048 Phosphorylase superfamily Ilyop_0838 PF02875 Mur ligase family, glutamate ligase domain Ilyop_0838 PF08245 Mur ligase middle domain Ilyop_0840 PF07475 HPr Serine kinase C-terminal domain Ilyop_0840 PF02603 HPr Serine kinase N terminus Ilyop_0841 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ilyop_0841 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ilyop_0842 PF02152 Dihydroneopterin aldolase Ilyop_0843 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Ilyop_0843 PF01227 GTP cyclohydrolase I Ilyop_0844 PF02272 DHHA1 domain Ilyop_0844 PF01368 DHH family Ilyop_0847 PF04472 Cell division protein SepF Ilyop_0850 PF02734 DAK2 domain Ilyop_0851 PF02733 Dak1 domain Ilyop_0852 PF03009 Glycerophosphoryl diester phosphodiesterase family Ilyop_0853 PF00313 'Cold-shock' DNA-binding domain Ilyop_0855 PF01546 Peptidase family M20/M25/M40 Ilyop_0855 PF07687 Peptidase dimerisation domain Ilyop_0859 PF00436 Single-strand binding protein family Ilyop_0863 PF01367 5'-3' exonuclease, C-terminal SAM fold Ilyop_0863 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Ilyop_0863 PF00476 DNA polymerase family A Ilyop_0864 PF14527 WhiA LAGLIDADG-like domain Ilyop_0864 PF10298 WhiA N-terminal LAGLIDADG-like domain Ilyop_0864 PF02650 WhiA C-terminal HTH domain Ilyop_0865 PF01687 Riboflavin kinase Ilyop_0865 PF06574 FAD synthetase Ilyop_0866 PF02616 Segregation and condensation protein ScpA Ilyop_0867 PF03023 Lipid II flippase MurJ Ilyop_0871 PF00005 ABC transporter Ilyop_0871 PF12704 MacB-like periplasmic core domain Ilyop_0871 PF02687 FtsX-like permease family Ilyop_0872 PF00005 ABC transporter Ilyop_0872 PF12704 MacB-like periplasmic core domain Ilyop_0872 PF02687 FtsX-like permease family Ilyop_0875 PF03006 Haemolysin-III related Ilyop_0880 PF01751 Toprim domain Ilyop_0880 PF13331 Domain of unknown function (DUF4093) Ilyop_0886 PF01554 MatE Ilyop_0887 PF00909 Ammonium Transporter Family Ilyop_0888 PF00543 Nitrogen regulatory protein P-II Ilyop_0893 PF01212 Beta-eliminating lyase Ilyop_0904 PF11074 Domain of unknown function(DUF2779) Ilyop_0907 PF01420 Type I restriction modification DNA specificity domain Ilyop_0911 PF01523 Putative modulator of DNA gyrase Ilyop_0912 PF00543 Nitrogen regulatory protein P-II Ilyop_0913 PF00909 Ammonium Transporter Family Ilyop_0914 PF00543 Nitrogen regulatory protein P-II Ilyop_0916 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0917 PF00106 short chain dehydrogenase Ilyop_0920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Ilyop_0920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ilyop_0924 PF02254 TrkA-N domain Ilyop_0924 PF07885 Ion channel Ilyop_0926 PF04454 Encapsulating protein for peroxidase Ilyop_0929 PF01797 Transposase IS200 like Ilyop_0931 PF02899 Phage integrase, N-terminal SAM-like domain Ilyop_0931 PF00589 Phage integrase family Ilyop_0933 PF01479 S4 domain Ilyop_0933 PF00849 RNA pseudouridylate synthase Ilyop_0934 PF04225 Opacity-associated protein A LysM-like domain Ilyop_0934 PF01551 Peptidase family M23 Ilyop_0937 PF00128 Alpha amylase, catalytic domain Ilyop_0937 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Ilyop_0938 PF01797 Transposase IS200 like Ilyop_0939 PF00881 Nitroreductase family Ilyop_0940 PF01261 Xylose isomerase-like TIM barrel Ilyop_0942 PF13840 ACT domain Ilyop_0942 PF00696 Amino acid kinase family Ilyop_0948 PF00313 'Cold-shock' DNA-binding domain Ilyop_0951 PF00563 EAL domain Ilyop_0951 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0951 PF00360 Phytochrome region Ilyop_0951 PF01590 GAF domain Ilyop_0952 PF05656 Protein of unknown function (DUF805) Ilyop_0953 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_0953 PF00360 Phytochrome region Ilyop_0953 PF00563 EAL domain Ilyop_0953 PF01590 GAF domain Ilyop_0954 PF04055 Radical SAM superfamily Ilyop_0954 PF16199 Radical_SAM C-terminal domain Ilyop_0957 PF01638 HxlR-like helix-turn-helix Ilyop_0959 PF02677 Epoxyqueuosine reductase QueH Ilyop_0960 PF00293 NUDIX domain Ilyop_0961 PF00588 SpoU rRNA Methylase family Ilyop_0961 PF08032 RNA 2'-O ribose methyltransferase substrate binding Ilyop_0964 PF04073 Aminoacyl-tRNA editing domain Ilyop_0965 PF01593 Flavin containing amine oxidoreductase Ilyop_0966 PF03109 ABC1 family Ilyop_0969 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0974 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_0975 PF00072 Response regulator receiver domain Ilyop_0975 PF08664 YcbB domain Ilyop_0976 PF00375 Sodium:dicarboxylate symporter family Ilyop_0978 PF00465 Iron-containing alcohol dehydrogenase Ilyop_0980 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ilyop_0980 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Ilyop_0981 PF00871 Acetokinase family Ilyop_0984 PF18152 DAHP synthase ferredoxin-like domain Ilyop_0984 PF00793 DAHP synthetase I family Ilyop_0986 PF02652 L-lactate permease Ilyop_0987 PF01565 FAD binding domain Ilyop_0987 PF02913 FAD linked oxidases, C-terminal domain Ilyop_0988 PF01012 Electron transfer flavoprotein domain Ilyop_0988 PF00766 Electron transfer flavoprotein FAD-binding domain Ilyop_0988 PF13237 4Fe-4S dicluster domain Ilyop_0989 PF01012 Electron transfer flavoprotein domain Ilyop_0990 PF00392 Bacterial regulatory proteins, gntR family Ilyop_0990 PF07729 FCD domain Ilyop_0994 PF12706 Beta-lactamase superfamily domain Ilyop_0998 PF00223 Photosystem I psaA/psaB protein Ilyop_0998 PF00691 OmpA family Ilyop_0999 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_1000 PF00365 Phosphofructokinase Ilyop_1003 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Ilyop_1003 PF00391 PEP-utilising enzyme, mobile domain Ilyop_1003 PF02896 PEP-utilising enzyme, TIM barrel domain Ilyop_1005 PF02502 Ribose/Galactose Isomerase Ilyop_1006 PF01230 HIT domain Ilyop_1007 PF01699 Sodium/calcium exchanger protein Ilyop_1008 PF13649 Methyltransferase domain Ilyop_1012 PF00293 NUDIX domain Ilyop_1041 PF00574 Clp protease Ilyop_1048 PF18755 Restriction Enzyme Adenine Methylase Associated Ilyop_1048 PF01555 DNA methylase Ilyop_1055 PF02384 N-6 DNA Methylase Ilyop_1070 PF01156 Inosine-uridine preferring nucleoside hydrolase Ilyop_1071 PF00300 Histidine phosphatase superfamily (branch 1) Ilyop_1073 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ilyop_1073 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ilyop_1075 PF02348 Cytidylyltransferase Ilyop_1077 PF00465 Iron-containing alcohol dehydrogenase Ilyop_1078 PF03063 Prismane/CO dehydrogenase family Ilyop_1081 PF01467 Cytidylyltransferase-like Ilyop_1082 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_1082 PF02378 Phosphotransferase system, EIIC Ilyop_1082 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Ilyop_1084 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Ilyop_1086 PF02463 RecF/RecN/SMC N terminal domain Ilyop_1086 PF06470 SMC proteins Flexible Hinge Domain Ilyop_1087 PF07724 AAA domain (Cdc48 subfamily) Ilyop_1087 PF00004 ATPase family associated with various cellular activities (AAA) Ilyop_1087 PF10431 C-terminal, D2-small domain, of ClpB protein Ilyop_1088 PF02698 DUF218 domain Ilyop_1089 PF02625 XdhC and CoxI family Ilyop_1089 PF13478 XdhC Rossmann domain Ilyop_1090 PF12804 MobA-like NTP transferase domain Ilyop_1091 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_1091 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Ilyop_1091 PF01799 [2Fe-2S] binding domain Ilyop_1092 PF01799 [2Fe-2S] binding domain Ilyop_1092 PF00111 2Fe-2S iron-sulfur cluster binding domain Ilyop_1098 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ilyop_1098 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ilyop_1098 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ilyop_1099 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_1101 PF00860 Permease family Ilyop_1103 PF00155 Aminotransferase class I and II Ilyop_1104 PF01680 SOR/SNZ family Ilyop_1105 PF01174 SNO glutamine amidotransferase family Ilyop_1106 PF01551 Peptidase family M23 Ilyop_1106 PF01476 LysM domain Ilyop_1106 PF08525 Opacity-associated protein A N-terminal motif Ilyop_1107 PF02535 ZIP Zinc transporter Ilyop_1108 PF01725 Ham1 family Ilyop_1109 PF01138 3' exoribonuclease family, domain 1 Ilyop_1109 PF03725 3' exoribonuclease family, domain 2 Ilyop_1110 PF00664 ABC transporter transmembrane region Ilyop_1110 PF00005 ABC transporter Ilyop_1111 PF02684 Lipid-A-disaccharide synthetase Ilyop_1113 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_1113 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Ilyop_1114 PF07977 FabA-like domain Ilyop_1115 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Ilyop_1116 PF13361 UvrD-like helicase C-terminal domain Ilyop_1116 PF00580 UvrD/REP helicase N-terminal domain Ilyop_1117 PF01545 Cation efflux family Ilyop_1117 PF16916 Dimerisation domain of Zinc Transporter Ilyop_1118 PF00571 CBS domain Ilyop_1118 PF01769 Divalent cation transporter Ilyop_1118 PF03448 MgtE intracellular N domain Ilyop_1121 PF01066 CDP-alcohol phosphatidyltransferase Ilyop_1122 PF00654 Voltage gated chloride channel Ilyop_1124 PF02779 Transketolase, pyrimidine binding domain Ilyop_1124 PF02780 Transketolase, C-terminal domain Ilyop_1124 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Ilyop_1125 PF00456 Transketolase, thiamine diphosphate binding domain Ilyop_1126 PF00270 DEAD/DEAH box helicase Ilyop_1126 PF00570 HRDC domain Ilyop_1126 PF16124 RecQ zinc-binding Ilyop_1126 PF09382 RQC domain Ilyop_1126 PF00271 Helicase conserved C-terminal domain Ilyop_1128 PF00873 AcrB/AcrD/AcrF family Ilyop_1129 PF13533 Biotin-lipoyl like Ilyop_1130 PF02321 Outer membrane efflux protein Ilyop_1131 PF01047 MarR family Ilyop_1132 PF02378 Phosphotransferase system, EIIC Ilyop_1132 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Ilyop_1132 PF00367 phosphotransferase system, EIIB Ilyop_1133 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Ilyop_1134 PF00665 Integrase core domain Ilyop_1134 PF09299 Mu transposase, C-terminal Ilyop_1135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Ilyop_1136 PF03477 ATP cone domain Ilyop_1136 PF02867 Ribonucleotide reductase, barrel domain Ilyop_1136 PF00317 Ribonucleotide reductase, all-alpha domain Ilyop_1137 PF00581 Rhodanese-like domain Ilyop_1138 PF00474 Sodium:solute symporter family Ilyop_1140 PF01047 MarR family Ilyop_1141 PF02261 Aspartate decarboxylase Ilyop_1142 PF02569 Pantoate-beta-alanine ligase Ilyop_1143 PF02548 Ketopantoate hydroxymethyltransferase Ilyop_1144 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Ilyop_1144 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Ilyop_1145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ilyop_1145 PF03466 LysR substrate binding domain Ilyop_1146 PF01177 Asp/Glu/Hydantoin racemase Ilyop_1147 PF04204 Homoserine O-succinyltransferase Ilyop_1148 PF01184 GPR1/FUN34/yaaH family Ilyop_1149 PF07286 Protein of unknown function (DUF1445) Ilyop_1150 PF01566 Natural resistance-associated macrophage protein Ilyop_1151 PF09339 IclR helix-turn-helix domain Ilyop_1151 PF01614 Bacterial transcriptional regulator Ilyop_1153 PF02682 Carboxyltransferase domain, subdomain C and D Ilyop_1154 PF02626 Carboxyltransferase domain, subdomain A and B Ilyop_1156 PF02554 Carbon starvation protein CstA Ilyop_1157 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Ilyop_1157 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Ilyop_1159 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_1159 PF00205 Thiamine pyrophosphate enzyme, central domain Ilyop_1159 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ilyop_1160 PF00920 Dehydratase family Ilyop_1161 PF00180 Isocitrate/isopropylmalate dehydrogenase Ilyop_1162 PF00694 Aconitase C-terminal domain Ilyop_1163 PF00330 Aconitase family (aconitate hydratase) Ilyop_1168 PF00753 Metallo-beta-lactamase superfamily Ilyop_1168 PF00258 Flavodoxin Ilyop_1168 PF00301 Rubredoxin Ilyop_1169 PF01790 Prolipoprotein diacylglyceryl transferase Ilyop_1170 PF02441 Flavoprotein Ilyop_1170 PF04127 DNA / pantothenate metabolism flavoprotein Ilyop_1171 PF00313 'Cold-shock' DNA-binding domain Ilyop_1172 PF02567 Phenazine biosynthesis-like protein Ilyop_1175 PF13649 Methyltransferase domain Ilyop_1176 PF05971 RNA methyltransferase Ilyop_1177 PF01554 MatE Ilyop_1181 PF01964 Radical SAM ThiC family Ilyop_1184 PF06968 Biotin and Thiamin Synthesis associated domain Ilyop_1184 PF04055 Radical SAM superfamily Ilyop_1185 PF00899 ThiF family Ilyop_1186 PF02581 Thiamine monophosphate synthase Ilyop_1187 PF03776 Septum formation topological specificity factor MinE Ilyop_1188 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Ilyop_1189 PF03775 Septum formation inhibitor MinC, C-terminal domain Ilyop_1191 PF03553 Na+/H+ antiporter family Ilyop_1192 PF03180 NLPA lipoprotein Ilyop_1193 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1194 PF09383 NIL domain Ilyop_1194 PF00005 ABC transporter Ilyop_1195 PF12724 Flavodoxin domain Ilyop_1196 PF01522 Polysaccharide deacetylase Ilyop_1197 PF06629 MltA-interacting protein MipA Ilyop_1200 PF00708 Acylphosphatase Ilyop_1201 PF01761 3-dehydroquinate synthase Ilyop_1201 PF02541 Ppx/GppA phosphatase family Ilyop_1202 PF01263 Aldose 1-epimerase Ilyop_1203 PF00438 S-adenosylmethionine synthetase, N-terminal domain Ilyop_1203 PF02772 S-adenosylmethionine synthetase, central domain Ilyop_1203 PF02773 S-adenosylmethionine synthetase, C-terminal domain Ilyop_1204 PF17284 Spermidine synthase tetramerisation domain Ilyop_1205 PF02675 S-adenosylmethionine decarboxylase Ilyop_1210 PF08534 Redoxin Ilyop_1213 PF03352 Methyladenine glycosylase Ilyop_1213 PF00117 Glutamine amidotransferase class-I Ilyop_1213 PF13673 Acetyltransferase (GNAT) domain Ilyop_1213 PF00958 GMP synthase C terminal domain Ilyop_1213 PF13302 Acetyltransferase (GNAT) domain Ilyop_1214 PF00106 short chain dehydrogenase Ilyop_1216 PF01202 Shikimate kinase Ilyop_1220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ilyop_1220 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ilyop_1221 PF02256 Iron hydrogenase small subunit Ilyop_1221 PF02906 Iron only hydrogenase large subunit, C-terminal domain Ilyop_1221 PF00037 4Fe-4S binding domain Ilyop_1221 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_1224 PF00266 Aminotransferase class-V Ilyop_1225 PF00873 AcrB/AcrD/AcrF family Ilyop_1228 PF04333 MlaA lipoprotein Ilyop_1230 PF00465 Iron-containing alcohol dehydrogenase Ilyop_1230 PF00171 Aldehyde dehydrogenase family Ilyop_1231 PF13291 ACT domain Ilyop_1231 PF00291 Pyridoxal-phosphate dependent enzyme Ilyop_1232 PF00892 EamA-like transporter family Ilyop_1234 PF00183 Hsp90 protein Ilyop_1235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ilyop_1236 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1237 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1237 PF12911 N-terminal TM domain of oligopeptide transport permease C Ilyop_1238 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_1238 PF00005 ABC transporter Ilyop_1239 PF00005 ABC transporter Ilyop_1239 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_1242 PF12704 MacB-like periplasmic core domain Ilyop_1242 PF00005 ABC transporter Ilyop_1242 PF02687 FtsX-like permease family Ilyop_1243 PF02687 FtsX-like permease family Ilyop_1243 PF00005 ABC transporter Ilyop_1243 PF12704 MacB-like periplasmic core domain Ilyop_1252 PF03537 Glycoside-hydrolase family GH114 Ilyop_1253 PF02378 Phosphotransferase system, EIIC Ilyop_1253 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_1253 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Ilyop_1254 PF08125 Mannitol dehydrogenase C-terminal domain Ilyop_1254 PF01232 Mannitol dehydrogenase Rossmann domain Ilyop_1255 PF01380 SIS domain Ilyop_1256 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_1256 PF02378 Phosphotransferase system, EIIC Ilyop_1256 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Ilyop_1257 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_1257 PF00874 PRD domain Ilyop_1257 PF05043 Mga helix-turn-helix domain Ilyop_1257 PF08279 HTH domain Ilyop_1258 PF01734 Patatin-like phospholipase Ilyop_1259 PF12627 Probable RNA and SrmB- binding site of polymerase A Ilyop_1259 PF01743 Poly A polymerase head domain Ilyop_1259 PF13735 tRNA nucleotidyltransferase domain 2 putative Ilyop_1262 PF03796 DnaB-like helicase C terminal domain Ilyop_1262 PF00772 DnaB-like helicase N terminal domain Ilyop_1263 PF03948 Ribosomal protein L9, C-terminal domain Ilyop_1263 PF01281 Ribosomal protein L9, N-terminal domain Ilyop_1265 PF12169 DNA polymerase III subunits gamma and tau domain III Ilyop_1266 PF00072 Response regulator receiver domain Ilyop_1266 PF02954 Bacterial regulatory protein, Fis family Ilyop_1266 PF00158 Sigma-54 interaction domain Ilyop_1268 PF02472 Biopolymer transport protein ExbD/TolR Ilyop_1269 PF01618 MotA/TolQ/ExbB proton channel family Ilyop_1274 PF04542 Sigma-70 region 2 Ilyop_1274 PF04545 Sigma-70, region 4 Ilyop_1274 PF04539 Sigma-70 region 3 Ilyop_1274 PF00140 Sigma-70 factor, region 1.2 Ilyop_1274 PF03979 Sigma-70 factor, region 1.1 Ilyop_1276 PF02660 Glycerol-3-phosphate acyltransferase Ilyop_1277 PF05958 tRNA (Uracil-5-)-methyltransferase Ilyop_1279 PF01795 MraW methylase family Ilyop_1280 PF12792 CSS motif domain associated with EAL Ilyop_1280 PF00563 EAL domain Ilyop_1282 PF02325 YGGT family Ilyop_1283 PF01066 CDP-alcohol phosphatidyltransferase Ilyop_1285 PF00013 KH domain Ilyop_1285 PF00575 S1 RNA binding domain Ilyop_1285 PF03725 3' exoribonuclease family, domain 2 Ilyop_1285 PF01138 3' exoribonuclease family, domain 1 Ilyop_1285 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Ilyop_1288 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Ilyop_1289 PF00230 Major intrinsic protein Ilyop_1291 PF08841 Diol dehydratase reactivase ATPase-like domain Ilyop_1291 PF18427 DD-reactivating factor swiveling domain Ilyop_1292 PF02287 Dehydratase small subunit Ilyop_1293 PF02288 Dehydratase medium subunit Ilyop_1294 PF02286 Dehydratase large subunit Ilyop_1295 PF03928 Haem-degrading Ilyop_1296 PF10114 Sensory domain found in PocR Ilyop_1296 PF12833 Helix-turn-helix domain Ilyop_1297 PF00465 Iron-containing alcohol dehydrogenase Ilyop_1298 PF02659 Putative manganese efflux pump Ilyop_1300 PF01967 MoaC family Ilyop_1301 PF06463 Molybdenum Cofactor Synthesis C Ilyop_1301 PF04055 Radical SAM superfamily Ilyop_1302 PF03454 MoeA C-terminal region (domain IV) Ilyop_1302 PF03453 MoeA N-terminal region (domain I and II) Ilyop_1302 PF00994 Probable molybdopterin binding domain Ilyop_1303 PF03453 MoeA N-terminal region (domain I and II) Ilyop_1303 PF03454 MoeA C-terminal region (domain IV) Ilyop_1303 PF00994 Probable molybdopterin binding domain Ilyop_1304 PF00005 ABC transporter Ilyop_1305 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1306 PF12849 PBP superfamily domain Ilyop_1307 PF00899 ThiF family Ilyop_1307 PF00581 Rhodanese-like domain Ilyop_1309 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Ilyop_1309 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Ilyop_1311 PF13291 ACT domain Ilyop_1311 PF02824 TGS domain Ilyop_1311 PF04607 Region found in RelA / SpoT proteins Ilyop_1312 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Ilyop_1312 PF01137 RNA 3'-terminal phosphate cyclase Ilyop_1313 PF00664 ABC transporter transmembrane region Ilyop_1313 PF00005 ABC transporter Ilyop_1316 PF00834 Ribulose-phosphate 3 epimerase family Ilyop_1317 PF03193 RsgA GTPase Ilyop_1317 PF16745 RsgA N-terminal domain Ilyop_1319 PF00156 Phosphoribosyl transferase domain Ilyop_1320 PF00156 Phosphoribosyl transferase domain Ilyop_1321 PF00398 Ribosomal RNA adenine dimethylase Ilyop_1323 PF03061 Thioesterase superfamily Ilyop_1325 PF01782 RimM N-terminal domain Ilyop_1325 PF05239 PRC-barrel domain Ilyop_1326 PF01746 tRNA (Guanine-1)-methyltransferase Ilyop_1327 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_1328 PF09936 SAM-dependent RNA methyltransferase Ilyop_1329 PF00929 Exonuclease Ilyop_1329 PF02811 PHP domain Ilyop_1329 PF14579 Helix-hairpin-helix motif Ilyop_1329 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ilyop_1329 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ilyop_1329 PF11490 DNA polymerase III polC-type N-terminus II Ilyop_1331 PF00301 Rubredoxin Ilyop_1332 PF00312 Ribosomal protein S15 Ilyop_1333 PF01434 Peptidase family M41 Ilyop_1333 PF00004 ATPase family associated with various cellular activities (AAA) Ilyop_1333 PF17862 AAA+ lid domain Ilyop_1334 PF11734 TilS substrate C-terminal domain Ilyop_1334 PF01171 PP-loop family Ilyop_1335 PF08486 Stage II sporulation protein Ilyop_1336 PF04055 Radical SAM superfamily Ilyop_1336 PF02310 B12 binding domain Ilyop_1337 PF02618 YceG-like family Ilyop_1338 PF00271 Helicase conserved C-terminal domain Ilyop_1338 PF00270 DEAD/DEAH box helicase Ilyop_1340 PF00860 Permease family Ilyop_1342 PF12850 Calcineurin-like phosphoesterase superfamily domain Ilyop_1344 PF04263 Thiamin pyrophosphokinase, catalytic domain Ilyop_1344 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain Ilyop_1347 PF01219 Prokaryotic diacylglycerol kinase Ilyop_1348 PF02130 Uncharacterized protein family UPF0054 Ilyop_1349 PF07698 7TM receptor with intracellular HD hydrolase Ilyop_1349 PF07697 7TM-HD extracellular Ilyop_1349 PF01966 HD domain Ilyop_1350 PF13307 Helicase C-terminal domain Ilyop_1350 PF06733 DEAD_2 Ilyop_1351 PF01649 Ribosomal protein S20 Ilyop_1352 PF00459 Inositol monophosphatase family Ilyop_1354 PF00403 Heavy-metal-associated domain Ilyop_1356 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1358 PF00091 Tubulin/FtsZ family, GTPase domain Ilyop_1358 PF12327 FtsZ family, C-terminal domain Ilyop_1359 PF01022 Bacterial regulatory protein, arsR family Ilyop_1361 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Ilyop_1364 PF01220 Dehydroquinase class II Ilyop_1365 PF03477 ATP cone domain Ilyop_1366 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Ilyop_1366 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_1369 PF04085 rod shape-determining protein MreC Ilyop_1370 PF00118 TCP-1/cpn60 chaperonin family Ilyop_1371 PF00166 Chaperonin 10 Kd subunit Ilyop_1372 PF00886 Ribosomal protein S16 Ilyop_1373 PF00448 SRP54-type protein, GTPase domain Ilyop_1373 PF02978 Signal peptide binding domain Ilyop_1373 PF02881 SRP54-type protein, helical bundle domain Ilyop_1374 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Ilyop_1375 PF00709 Adenylosuccinate synthetase Ilyop_1376 PF02390 Putative methyltransferase Ilyop_1376 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Ilyop_1377 PF02390 Putative methyltransferase Ilyop_1377 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Ilyop_1379 PF02224 Cytidylate kinase Ilyop_1381 PF01975 Survival protein SurE Ilyop_1382 PF13277 YmdB-like protein Ilyop_1383 PF01966 HD domain Ilyop_1383 PF12072 Domain of unknown function (DUF3552) Ilyop_1383 PF00013 KH domain Ilyop_1384 PF01740 STAS domain Ilyop_1385 PF13581 Histidine kinase-like ATPase domain Ilyop_1388 PF01018 GTP1/OBG Ilyop_1388 PF09269 Domain of unknown function (DUF1967) Ilyop_1388 PF01926 50S ribosome-binding GTPase Ilyop_1389 PF01016 Ribosomal L27 protein Ilyop_1390 PF04327 Cysteine protease Prp Ilyop_1391 PF00829 Ribosomal prokaryotic L21 protein Ilyop_1392 PF00375 Sodium:dicarboxylate symporter family Ilyop_1393 PF17850 CysA C-terminal regulatory domain Ilyop_1393 PF00005 ABC transporter Ilyop_1394 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1399 PF00682 HMGL-like Ilyop_1402 PF04055 Radical SAM superfamily Ilyop_1402 PF02579 Dinitrogenase iron-molybdenum cofactor Ilyop_1404 PF00148 Nitrogenase component 1 type Oxidoreductase Ilyop_1405 PF00148 Nitrogenase component 1 type Oxidoreductase Ilyop_1406 PF00148 Nitrogenase component 1 type Oxidoreductase Ilyop_1407 PF00148 Nitrogenase component 1 type Oxidoreductase Ilyop_1408 PF00543 Nitrogen regulatory protein P-II Ilyop_1409 PF00543 Nitrogen regulatory protein P-II Ilyop_1410 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Ilyop_1411 PF00814 Glycoprotease family Ilyop_1412 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Ilyop_1413 PF00294 pfkB family carbohydrate kinase Ilyop_1413 PF01467 Cytidylyltransferase-like Ilyop_1415 PF00343 Carbohydrate phosphorylase Ilyop_1416 PF02446 4-alpha-glucanotransferase Ilyop_1418 PF01197 Ribosomal protein L31 Ilyop_1422 PF09186 Domain of unknown function (DUF1949) Ilyop_1422 PF01205 Uncharacterized protein family UPF0029 Ilyop_1423 PF03458 UPF0126 domain Ilyop_1424 PF02163 Peptidase family M50 Ilyop_1425 PF03772 Competence protein Ilyop_1426 PF01966 HD domain Ilyop_1426 PF13286 Phosphohydrolase-associated domain Ilyop_1428 PF05636 HIGH Nucleotidyl Transferase Ilyop_1430 PF03309 Type III pantothenate kinase Ilyop_1434 PF00380 Ribosomal protein S9/S16 Ilyop_1435 PF00572 Ribosomal protein L13 Ilyop_1437 PF12627 Probable RNA and SrmB- binding site of polymerase A Ilyop_1437 PF01743 Poly A polymerase head domain Ilyop_1437 PF01966 HD domain Ilyop_1438 PF00348 Polyprenyl synthetase Ilyop_1439 PF02609 Exonuclease VII small subunit Ilyop_1441 PF02547 Queuosine biosynthesis protein Ilyop_1442 PF05175 Methyltransferase small domain Ilyop_1442 PF17827 PrmC N-terminal domain Ilyop_1443 PF03462 PCRF domain Ilyop_1443 PF00472 RF-1 domain Ilyop_1449 PF04551 GcpE protein Ilyop_1452 PF08460 Bacterial SH3 domain Ilyop_1452 PF01551 Peptidase family M23 Ilyop_1453 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ilyop_1453 PF07497 Rho termination factor, RNA-binding domain Ilyop_1454 PF01699 Sodium/calcium exchanger protein Ilyop_1455 PF01938 TRAM domain Ilyop_1455 PF00919 Uncharacterized protein family UPF0004 Ilyop_1455 PF04055 Radical SAM superfamily Ilyop_1458 PF01925 Sulfite exporter TauE/SafE Ilyop_1459 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Ilyop_1460 PF01048 Phosphorylase superfamily Ilyop_1462 PF01791 DeoC/LacD family aldolase Ilyop_1463 PF02885 Glycosyl transferase family, helical bundle domain Ilyop_1463 PF00591 Glycosyl transferase family, a/b domain Ilyop_1463 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Ilyop_1465 PF00155 Aminotransferase class I and II Ilyop_1466 PF01029 NusB family Ilyop_1470 PF00289 Biotin carboxylase, N-terminal domain Ilyop_1470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ilyop_1470 PF02785 Biotin carboxylase C-terminal domain Ilyop_1472 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ilyop_1472 PF02811 PHP domain Ilyop_1472 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ilyop_1472 PF14579 Helix-hairpin-helix motif Ilyop_1472 PF01336 OB-fold nucleic acid binding domain Ilyop_1474 PF04434 SWIM zinc finger Ilyop_1474 PF00176 SNF2 family N-terminal domain Ilyop_1474 PF00271 Helicase conserved C-terminal domain Ilyop_1476 PF01926 50S ribosome-binding GTPase Ilyop_1476 PF07650 KH domain Ilyop_1477 PF02899 Phage integrase, N-terminal SAM-like domain Ilyop_1477 PF00589 Phage integrase family Ilyop_1478 PF13476 AAA domain Ilyop_1479 PF01513 ATP-NAD kinase Ilyop_1480 PF01551 Peptidase family M23 Ilyop_1482 PF00005 ABC transporter Ilyop_1483 PF02780 Transketolase, C-terminal domain Ilyop_1483 PF02779 Transketolase, pyrimidine binding domain Ilyop_1484 PF00456 Transketolase, thiamine diphosphate binding domain Ilyop_1486 PF00009 Elongation factor Tu GTP binding domain Ilyop_1486 PF03143 Elongation factor Tu C-terminal domain Ilyop_1486 PF03144 Elongation factor Tu domain 2 Ilyop_1487 PF01926 50S ribosome-binding GTPase Ilyop_1487 PF04055 Radical SAM superfamily Ilyop_1487 PF01018 GTP1/OBG Ilyop_1488 PF01933 Uncharacterised protein family UPF0052 Ilyop_1490 PF03481 Putative GTP-binding controlling metal-binding Ilyop_1490 PF01300 Telomere recombination Ilyop_1492 PF18698 Histidine kinase sensor domain Ilyop_1492 PF00989 PAS fold Ilyop_1492 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_1492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_1492 PF00672 HAMP domain Ilyop_1493 PF00486 Transcriptional regulatory protein, C terminal Ilyop_1493 PF00072 Response regulator receiver domain Ilyop_1495 PF02583 Metal-sensitive transcriptional repressor Ilyop_1496 PF00403 Heavy-metal-associated domain Ilyop_1499 PF01145 SPFH domain / Band 7 family Ilyop_1500 PF01145 SPFH domain / Band 7 family Ilyop_1501 PF02457 DisA bacterial checkpoint controller nucleotide-binding Ilyop_1501 PF10635 DisA bacterial checkpoint controller linker region Ilyop_1502 PF18073 Rubredoxin metal binding domain Ilyop_1503 PF01467 Cytidylyltransferase-like Ilyop_1504 PF00575 S1 RNA binding domain Ilyop_1504 PF10150 Ribonuclease E/G family Ilyop_1506 PF14622 Ribonuclease-III-like Ilyop_1506 PF00035 Double-stranded RNA binding motif Ilyop_1507 PF02801 Beta-ketoacyl synthase, C-terminal domain Ilyop_1507 PF00109 Beta-ketoacyl synthase, N-terminal domain Ilyop_1508 PF00550 Phosphopantetheine attachment site Ilyop_1510 PF00698 Acyl transferase domain Ilyop_1511 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ilyop_1511 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ilyop_1512 PF02504 Fatty acid synthesis protein Ilyop_1513 PF01783 Ribosomal L32p protein family Ilyop_1515 PF01926 50S ribosome-binding GTPase Ilyop_1515 PF06071 Protein of unknown function (DUF933) Ilyop_1516 PF01676 Metalloenzyme superfamily Ilyop_1516 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Ilyop_1517 PF00121 Triosephosphate isomerase Ilyop_1519 PF00156 Phosphoribosyl transferase domain Ilyop_1521 PF02021 Uncharacterised protein family UPF0102 Ilyop_1522 PF01351 Ribonuclease HII Ilyop_1523 PF00849 RNA pseudouridylate synthase Ilyop_1523 PF01479 S4 domain Ilyop_1525 PF02915 Rubrerythrin Ilyop_1526 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Ilyop_1526 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Ilyop_1528 PF02080 TrkA-C domain Ilyop_1528 PF06826 Predicted Permease Membrane Region Ilyop_1529 PF13335 Magnesium chelatase, subunit ChlI C-terminal Ilyop_1529 PF01078 Magnesium chelatase, subunit ChlI Ilyop_1532 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Ilyop_1532 PF14572 Phosphoribosyl synthetase-associated domain Ilyop_1533 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_1533 PF14602 Hexapeptide repeat of succinyl-transferase Ilyop_1533 PF00483 Nucleotidyl transferase Ilyop_1534 PF03466 LysR substrate binding domain Ilyop_1534 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ilyop_1536 PF00684 DnaJ central domain Ilyop_1536 PF01556 DnaJ C terminal domain Ilyop_1536 PF00226 DnaJ domain Ilyop_1538 PF00453 Ribosomal protein L20 Ilyop_1539 PF01632 Ribosomal protein L35 Ilyop_1540 PF00707 Translation initiation factor IF-3, C-terminal domain Ilyop_1540 PF05198 Translation initiation factor IF-3, N-terminal domain Ilyop_1542 PF01380 SIS domain Ilyop_1542 PF00571 CBS domain Ilyop_1543 PF00793 DAHP synthetase I family Ilyop_1544 PF01225 Mur ligase family, catalytic domain Ilyop_1544 PF02875 Mur ligase family, glutamate ligase domain Ilyop_1544 PF08245 Mur ligase middle domain Ilyop_1545 PF00480 ROK family Ilyop_1546 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Ilyop_1547 PF00579 tRNA synthetases class I (W and Y) Ilyop_1552 PF00265 Thymidine kinase Ilyop_1553 PF03313 Serine dehydratase alpha chain Ilyop_1554 PF00155 Aminotransferase class I and II Ilyop_1554 PF00392 Bacterial regulatory proteins, gntR family Ilyop_1555 PF00005 ABC transporter Ilyop_1555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_1556 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_1556 PF00005 ABC transporter Ilyop_1558 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1559 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ilyop_1560 PF07722 Peptidase C26 Ilyop_1562 PF01965 DJ-1/PfpI family Ilyop_1564 PF01925 Sulfite exporter TauE/SafE Ilyop_1565 PF02535 ZIP Zinc transporter Ilyop_1566 PF02915 Rubrerythrin Ilyop_1567 PF16124 RecQ zinc-binding Ilyop_1567 PF00570 HRDC domain Ilyop_1567 PF00271 Helicase conserved C-terminal domain Ilyop_1567 PF00270 DEAD/DEAH box helicase Ilyop_1567 PF09382 RQC domain Ilyop_1569 PF08274 PhnA Zinc-Ribbon Ilyop_1569 PF03831 PhnA domain Ilyop_1575 PF00356 Bacterial regulatory proteins, lacI family Ilyop_1576 PF00474 Sodium:solute symporter family Ilyop_1577 PF00890 FAD binding domain Ilyop_1577 PF04205 FMN-binding domain Ilyop_1578 PF00999 Sodium/hydrogen exchanger family Ilyop_1578 PF02080 TrkA-C domain Ilyop_1578 PF03471 Transporter associated domain Ilyop_1582 PF14537 Cytochrome c3 Ilyop_1582 PF00890 FAD binding domain Ilyop_1583 PF03600 Citrate transporter Ilyop_1584 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_1584 PF13188 PAS domain Ilyop_1584 PF00072 Response regulator receiver domain Ilyop_1584 PF08448 PAS fold Ilyop_1584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_1585 PF00072 Response regulator receiver domain Ilyop_1585 PF00486 Transcriptional regulatory protein, C terminal Ilyop_1586 PF02001 Protein of unknown function DUF134 Ilyop_1587 PF10609 NUBPL iron-transfer P-loop NTPase Ilyop_1587 PF01883 Iron-sulfur cluster assembly protein Ilyop_1590 PF10609 NUBPL iron-transfer P-loop NTPase Ilyop_1591 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Ilyop_1593 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Ilyop_1593 PF12557 Cob(I)alamin adenosyltransferase N terminal Ilyop_1594 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_1594 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ilyop_1596 PF00375 Sodium:dicarboxylate symporter family Ilyop_1597 PF04474 Protein of unknown function (DUF554) Ilyop_1598 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ilyop_1598 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_1600 PF00881 Nitroreductase family Ilyop_1604 PF00072 Response regulator receiver domain Ilyop_1604 PF01966 HD domain Ilyop_1605 PF01544 CorA-like Mg2+ transporter protein Ilyop_1607 PF01810 LysE type translocator Ilyop_1608 PF13411 MerR HTH family regulatory protein Ilyop_1610 PF08240 Alcohol dehydrogenase GroES-like domain Ilyop_1610 PF16197 Ketoacyl-synthetase C-terminal extension Ilyop_1610 PF00109 Beta-ketoacyl synthase, N-terminal domain Ilyop_1610 PF02801 Beta-ketoacyl synthase, C-terminal domain Ilyop_1610 PF08659 KR domain Ilyop_1610 PF00550 Phosphopantetheine attachment site Ilyop_1610 PF14765 Polyketide synthase dehydratase Ilyop_1610 PF00698 Acyl transferase domain Ilyop_1611 PF01554 MatE Ilyop_1614 PF13090 Polyphosphate kinase C-terminal domain 2 Ilyop_1614 PF13089 Polyphosphate kinase N-terminal domain Ilyop_1614 PF02503 Polyphosphate kinase middle domain Ilyop_1614 PF17941 Polyphosphate kinase C-terminal domain 1 Ilyop_1615 PF02361 Cobalt transport protein Ilyop_1616 PF00005 ABC transporter Ilyop_1617 PF09819 ABC-type cobalt transport system, permease component Ilyop_1619 PF00881 Nitroreductase family Ilyop_1627 PF05167 Uncharacterised ACR (DUF711) Ilyop_1629 PF01053 Cys/Met metabolism PLP-dependent enzyme Ilyop_1635 PF02661 Fic/DOC family Ilyop_1635 PF13784 Fic/DOC family N-terminal Ilyop_1638 PF10400 Virulence activator alpha C-term Ilyop_1638 PF03551 Transcriptional regulator PadR-like family Ilyop_1639 PF07690 Major Facilitator Superfamily Ilyop_1640 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_1640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Ilyop_1641 PF00753 Metallo-beta-lactamase superfamily Ilyop_1641 PF16123 Hydroxyacylglutathione hydrolase C-terminus Ilyop_1646 PF01934 Protein of unknown function DUF86 Ilyop_1668 PF01668 SmpB protein Ilyop_1669 PF08206 Ribonuclease B OB domain Ilyop_1669 PF00773 RNB domain Ilyop_1669 PF17876 Cold shock domain Ilyop_1669 PF00575 S1 RNA binding domain Ilyop_1670 PF01966 HD domain Ilyop_1672 PF01520 N-acetylmuramoyl-L-alanine amidase Ilyop_1674 PF00226 DnaJ domain Ilyop_1674 PF01556 DnaJ C terminal domain Ilyop_1674 PF00684 DnaJ central domain Ilyop_1675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Ilyop_1675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Ilyop_1677 PF00012 Hsp70 protein Ilyop_1678 PF01025 GrpE Ilyop_1679 PF01628 HrcA protein C terminal domain Ilyop_1680 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_1681 PF16363 GDP-mannose 4,6 dehydratase Ilyop_1683 PF01554 MatE Ilyop_1685 PF00155 Aminotransferase class I and II Ilyop_1686 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ilyop_1686 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ilyop_1687 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Ilyop_1687 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ilyop_1687 PF02824 TGS domain Ilyop_1687 PF03129 Anticodon binding domain Ilyop_1691 PF01063 Amino-transferase class IV Ilyop_1692 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ilyop_1692 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Ilyop_1693 PF00085 Thioredoxin Ilyop_1694 PF00085 Thioredoxin Ilyop_1695 PF00899 ThiF family Ilyop_1696 PF00258 Flavodoxin Ilyop_1697 PF00270 DEAD/DEAH box helicase Ilyop_1697 PF00271 Helicase conserved C-terminal domain Ilyop_1697 PF17191 RecG wedge domain Ilyop_1698 PF00437 Type II/IV secretion system protein Ilyop_1699 PF04073 Aminoacyl-tRNA editing domain Ilyop_1699 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ilyop_1699 PF03129 Anticodon binding domain Ilyop_1700 PF01709 Transcriptional regulator Ilyop_1702 PF00753 Metallo-beta-lactamase superfamily Ilyop_1704 PF01726 LexA DNA binding domain Ilyop_1704 PF00717 Peptidase S24-like Ilyop_1706 PF01145 SPFH domain / Band 7 family Ilyop_1708 PF03553 Na+/H+ antiporter family Ilyop_1709 PF00809 Pterin binding enzyme Ilyop_1710 PF02540 NAD synthase Ilyop_1711 PF01926 50S ribosome-binding GTPase Ilyop_1712 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ilyop_1713 PF03572 Peptidase family S41 Ilyop_1713 PF17820 PDZ domain Ilyop_1713 PF01471 Putative peptidoglycan binding domain Ilyop_1714 PF01728 FtsJ-like methyltransferase Ilyop_1714 PF01479 S4 domain Ilyop_1716 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Ilyop_1716 PF02779 Transketolase, pyrimidine binding domain Ilyop_1716 PF02780 Transketolase, C-terminal domain Ilyop_1717 PF02681 Divergent PAP2 family Ilyop_1719 PF00753 Metallo-beta-lactamase superfamily Ilyop_1719 PF17770 Ribonuclease J C-terminal domain Ilyop_1719 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Ilyop_1720 PF03717 Penicillin-binding Protein dimerisation domain Ilyop_1720 PF00905 Penicillin binding protein transpeptidase domain Ilyop_1720 PF05223 NTF2-like N-terminal transpeptidase domain Ilyop_1724 PF04055 Radical SAM superfamily Ilyop_1724 PF00919 Uncharacterized protein family UPF0004 Ilyop_1724 PF01938 TRAM domain Ilyop_1725 PF04452 RNA methyltransferase Ilyop_1726 PF02082 Transcriptional regulator Ilyop_1727 PF05491 RuvB C-terminal winged helix domain Ilyop_1727 PF17864 RuvB AAA lid domain Ilyop_1727 PF05496 Holliday junction DNA helicase RuvB P-loop domain Ilyop_1728 PF04286 Protein of unknown function (DUF445) Ilyop_1730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Ilyop_1731 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Ilyop_1732 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1733 PF00571 CBS domain Ilyop_1733 PF00005 ABC transporter Ilyop_1734 PF02401 LytB protein Ilyop_1734 PF00575 S1 RNA binding domain Ilyop_1735 PF02401 LytB protein Ilyop_1735 PF00575 S1 RNA binding domain Ilyop_1736 PF00381 PTS HPr component phosphorylation site Ilyop_1737 PF00391 PEP-utilising enzyme, mobile domain Ilyop_1737 PF02896 PEP-utilising enzyme, TIM barrel domain Ilyop_1737 PF05524 PEP-utilising enzyme, N-terminal Ilyop_1739 PF04324 BFD-like [2Fe-2S] binding domain Ilyop_1739 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_1740 PF01266 FAD dependent oxidoreductase Ilyop_1741 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ilyop_1741 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ilyop_1742 PF00230 Major intrinsic protein Ilyop_1745 PF04324 BFD-like [2Fe-2S] binding domain Ilyop_1745 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_1746 PF01266 FAD dependent oxidoreductase Ilyop_1747 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ilyop_1747 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ilyop_1748 PF00230 Major intrinsic protein Ilyop_1750 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ilyop_1750 PF00175 Oxidoreductase NAD-binding domain Ilyop_1751 PF07943 Penicillin-binding protein 5, C-terminal domain Ilyop_1751 PF00768 D-alanyl-D-alanine carboxypeptidase Ilyop_1752 PF01592 NifU-like N terminal domain Ilyop_1753 PF00266 Aminotransferase class-V Ilyop_1754 PF00633 Helix-hairpin-helix motif Ilyop_1754 PF00730 HhH-GPD superfamily base excision DNA repair protein Ilyop_1756 PF00155 Aminotransferase class I and II Ilyop_1757 PF00579 tRNA synthetases class I (W and Y) Ilyop_1757 PF01479 S4 domain Ilyop_1759 PF02887 Pyruvate kinase, alpha/beta domain Ilyop_1759 PF00224 Pyruvate kinase, barrel domain Ilyop_1760 PF03952 Enolase, N-terminal domain Ilyop_1760 PF00113 Enolase, C-terminal TIM barrel domain Ilyop_1763 PF00158 Sigma-54 interaction domain Ilyop_1763 PF00072 Response regulator receiver domain Ilyop_1763 PF02954 Bacterial regulatory protein, Fis family Ilyop_1767 PF00440 Bacterial regulatory proteins, tetR family Ilyop_1767 PF08360 QacR-like protein, C-terminal region Ilyop_1768 PF00202 Aminotransferase class-III Ilyop_1769 PF00595 PDZ domain Ilyop_1769 PF02163 Peptidase family M50 Ilyop_1771 PF02223 Thymidylate kinase Ilyop_1772 PF13288 DXP reductoisomerase C-terminal domain Ilyop_1772 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ilyop_1772 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Ilyop_1774 PF01255 Putative undecaprenyl diphosphate synthase Ilyop_1775 PF01765 Ribosome recycling factor Ilyop_1776 PF00696 Amino acid kinase family Ilyop_1777 PF00889 Elongation factor TS Ilyop_1778 PF00318 Ribosomal protein S2 Ilyop_1779 PF00857 Isochorismatase family Ilyop_1780 PF04055 Radical SAM superfamily Ilyop_1780 PF06968 Biotin and Thiamin Synthesis associated domain Ilyop_1781 PF01196 Ribosomal protein L17 Ilyop_1782 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Ilyop_1782 PF01000 RNA polymerase Rpb3/RpoA insert domain Ilyop_1782 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Ilyop_1783 PF00163 Ribosomal protein S4/S9 N-terminal domain Ilyop_1783 PF01479 S4 domain Ilyop_1784 PF00411 Ribosomal protein S11 Ilyop_1785 PF00416 Ribosomal protein S13/S18 Ilyop_1786 PF00444 Ribosomal protein L36 Ilyop_1787 PF01176 Translation initiation factor 1A / IF-1 Ilyop_1788 PF00557 Metallopeptidase family M24 Ilyop_1789 PF05191 Adenylate kinase, active site lid Ilyop_1790 PF00344 SecY translocase Ilyop_1791 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ilyop_1792 PF00327 Ribosomal protein L30p/L7e Ilyop_1793 PF03719 Ribosomal protein S5, C-terminal domain Ilyop_1793 PF00333 Ribosomal protein S5, N-terminal domain Ilyop_1794 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ilyop_1795 PF00347 Ribosomal protein L6 Ilyop_1796 PF00410 Ribosomal protein S8 Ilyop_1797 PF00253 Ribosomal protein S14p/S29e Ilyop_1798 PF00673 ribosomal L5P family C-terminus Ilyop_1798 PF00281 Ribosomal protein L5 Ilyop_1799 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Ilyop_1799 PF00467 KOW motif Ilyop_1800 PF00238 Ribosomal protein L14p/L23e Ilyop_1801 PF00366 Ribosomal protein S17 Ilyop_1802 PF00831 Ribosomal L29 protein Ilyop_1803 PF00252 Ribosomal protein L16p/L10e Ilyop_1804 PF00189 Ribosomal protein S3, C-terminal domain Ilyop_1804 PF07650 KH domain Ilyop_1805 PF00237 Ribosomal protein L22p/L17e Ilyop_1806 PF00203 Ribosomal protein S19 Ilyop_1807 PF03947 Ribosomal Proteins L2, C-terminal domain Ilyop_1807 PF00181 Ribosomal Proteins L2, RNA binding domain Ilyop_1808 PF00276 Ribosomal protein L23 Ilyop_1809 PF00573 Ribosomal protein L4/L1 family Ilyop_1810 PF00297 Ribosomal protein L3 Ilyop_1811 PF00338 Ribosomal protein S10p/S20e Ilyop_1812 PF03144 Elongation factor Tu domain 2 Ilyop_1812 PF00009 Elongation factor Tu GTP binding domain Ilyop_1812 PF03143 Elongation factor Tu C-terminal domain Ilyop_1813 PF03144 Elongation factor Tu domain 2 Ilyop_1813 PF00679 Elongation factor G C-terminus Ilyop_1813 PF00009 Elongation factor Tu GTP binding domain Ilyop_1813 PF03764 Elongation factor G, domain IV Ilyop_1813 PF14492 Elongation Factor G, domain II Ilyop_1814 PF00177 Ribosomal protein S7p/S5e Ilyop_1815 PF00164 Ribosomal protein S12/S23 Ilyop_1816 PF12848 ABC transporter Ilyop_1816 PF00005 ABC transporter Ilyop_1816 PF16326 ABC transporter C-terminal domain Ilyop_1818 PF02542 YgbB family Ilyop_1819 PF00294 pfkB family carbohydrate kinase Ilyop_1819 PF01467 Cytidylyltransferase-like Ilyop_1820 PF03958 Bacterial type II/III secretion system short domain Ilyop_1820 PF00263 Bacterial type II and III secretion system protein Ilyop_1828 PF06750 Bacterial Peptidase A24 N-terminal domain Ilyop_1828 PF01478 Type IV leader peptidase family Ilyop_1832 PF00005 ABC transporter Ilyop_1833 PF00482 Type II secretion system (T2SS), protein F Ilyop_1834 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Ilyop_1834 PF00437 Type II/IV secretion system protein Ilyop_1836 PF00437 Type II/IV secretion system protein Ilyop_1838 PF09115 DNA polymerase III, delta subunit, C terminal Ilyop_1840 PF00636 Ribonuclease III domain Ilyop_1841 PF01406 tRNA synthetases class I (C) catalytic domain Ilyop_1841 PF09190 DALR domain Ilyop_1843 PF00795 Carbon-nitrogen hydrolase Ilyop_1843 PF02540 NAD synthase Ilyop_1844 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ilyop_1845 PF01713 Smr domain Ilyop_1845 PF00488 MutS domain V Ilyop_1846 PF00830 Ribosomal L28 family Ilyop_1847 PF01084 Ribosomal protein S18 Ilyop_1848 PF01250 Ribosomal protein S6 Ilyop_1849 PF00091 Tubulin/FtsZ family, GTPase domain Ilyop_1849 PF12327 FtsZ family, C-terminal domain Ilyop_1850 PF02491 SHS2 domain inserted in FTSA Ilyop_1852 PF01820 D-ala D-ala ligase N-terminus Ilyop_1852 PF07478 D-ala D-ala ligase C-terminus Ilyop_1853 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Ilyop_1853 PF01565 FAD binding domain Ilyop_1854 PF02875 Mur ligase family, glutamate ligase domain Ilyop_1854 PF08245 Mur ligase middle domain Ilyop_1854 PF01225 Mur ligase family, catalytic domain Ilyop_1855 PF04101 Glycosyltransferase family 28 C-terminal domain Ilyop_1855 PF03033 Glycosyltransferase family 28 N-terminal domain Ilyop_1856 PF08245 Mur ligase middle domain Ilyop_1857 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Ilyop_1857 PF00953 Glycosyl transferase family 4 Ilyop_1858 PF01225 Mur ligase family, catalytic domain Ilyop_1858 PF02875 Mur ligase family, glutamate ligase domain Ilyop_1858 PF08245 Mur ligase middle domain Ilyop_1859 PF08645 Polynucleotide kinase 3 phosphatase Ilyop_1864 PF02492 CobW/HypB/UreG, nucleotide-binding domain Ilyop_1865 PF00005 ABC transporter Ilyop_1867 PF08501 Shikimate dehydrogenase substrate binding domain Ilyop_1868 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Ilyop_1869 PF03063 Prismane/CO dehydrogenase family Ilyop_1870 PF01554 MatE Ilyop_1874 PF00072 Response regulator receiver domain Ilyop_1874 PF01966 HD domain Ilyop_1876 PF03883 Peroxide stress protein YaaA Ilyop_1880 PF00580 UvrD/REP helicase N-terminal domain Ilyop_1880 PF13361 UvrD-like helicase C-terminal domain Ilyop_1882 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ilyop_1883 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_1884 PF00005 ABC transporter Ilyop_1886 PF01541 GIY-YIG catalytic domain Ilyop_1887 PF00676 Dehydrogenase E1 component Ilyop_1888 PF02780 Transketolase, C-terminal domain Ilyop_1888 PF02779 Transketolase, pyrimidine binding domain Ilyop_1889 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Ilyop_1889 PF00364 Biotin-requiring enzyme Ilyop_1889 PF02817 e3 binding domain Ilyop_1890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ilyop_1890 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_1891 PF10437 Bacterial lipoate protein ligase C-terminus Ilyop_1891 PF03099 Biotin/lipoate A/B protein ligase family Ilyop_1893 PF00293 NUDIX domain Ilyop_1894 PF02127 Aminopeptidase I zinc metalloprotease (M18) Ilyop_1897 PF04026 SpoVG Ilyop_1899 PF01479 S4 domain Ilyop_1900 PF03819 MazG nucleotide pyrophosphohydrolase domain Ilyop_1901 PF17757 UvrB interaction domain Ilyop_1901 PF03461 TRCF domain Ilyop_1901 PF00271 Helicase conserved C-terminal domain Ilyop_1901 PF02559 CarD-like/TRCF domain Ilyop_1901 PF00270 DEAD/DEAH box helicase Ilyop_1902 PF13932 GidA associated domain Ilyop_1902 PF01134 Glucose inhibited division protein A Ilyop_1903 PF12631 MnmE helical domain Ilyop_1903 PF01926 50S ribosome-binding GTPase Ilyop_1903 PF10396 GTP-binding protein TrmE N-terminus Ilyop_1904 PF01424 R3H domain Ilyop_1904 PF14804 Jag N-terminus Ilyop_1905 PF02096 60Kd inner membrane protein Ilyop_1906 PF01809 Putative membrane protein insertion efficiency factor Ilyop_1907 PF00825 Ribonuclease P Ilyop_1908 PF00468 Ribosomal protein L34 Ilyop_1910 PF03788 LrgA family Ilyop_1911 PF04172 LrgB-like family Ilyop_1913 PF03372 Endonuclease/Exonuclease/phosphatase family Ilyop_1914 PF00485 Phosphoribulokinase / Uridine kinase family Ilyop_1917 PF01966 HD domain Ilyop_1917 PF00072 Response regulator receiver domain Ilyop_1919 PF00117 Glutamine amidotransferase class-I Ilyop_1919 PF00958 GMP synthase C terminal domain Ilyop_1919 PF02540 NAD synthase Ilyop_1949 PF00574 Clp protease Ilyop_1956 PF08346 AntA/AntB antirepressor Ilyop_1956 PF10548 P22AR C-terminal domain Ilyop_1986 PF02899 Phage integrase, N-terminal SAM-like domain Ilyop_1986 PF00589 Phage integrase family Ilyop_1987 PF01479 S4 domain Ilyop_1987 PF00849 RNA pseudouridylate synthase Ilyop_1988 PF01594 AI-2E family transporter Ilyop_1989 PF00301 Rubredoxin Ilyop_1990 PF02926 THUMP domain Ilyop_1990 PF01170 Putative RNA methylase family UPF0020 Ilyop_1991 PF13614 AAA domain Ilyop_1992 PF02195 ParB-like nuclease domain Ilyop_1992 PF17762 HTH domain found in ParB protein Ilyop_1995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ilyop_1997 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ilyop_1998 PF00881 Nitroreductase family Ilyop_2000 PF00365 Phosphofructokinase Ilyop_2002 PF00175 Oxidoreductase NAD-binding domain Ilyop_2002 PF00970 Oxidoreductase FAD-binding domain Ilyop_2002 PF00111 2Fe-2S iron-sulfur cluster binding domain Ilyop_2003 PF02508 Rnf-Nqr subunit, membrane protein Ilyop_2004 PF02508 Rnf-Nqr subunit, membrane protein Ilyop_2005 PF04205 FMN-binding domain Ilyop_2006 PF03116 NQR2, RnfD, RnfE family Ilyop_2007 PF01098 Cell cycle protein Ilyop_2008 PF03180 NLPA lipoprotein Ilyop_2009 PF13537 Glutamine amidotransferase domain Ilyop_2009 PF00733 Asparagine synthase Ilyop_2011 PF00152 tRNA synthetases class II (D, K and N) Ilyop_2011 PF01336 OB-fold nucleic acid binding domain Ilyop_2013 PF00924 Mechanosensitive ion channel Ilyop_2016 PF00999 Sodium/hydrogen exchanger family Ilyop_2016 PF00582 Universal stress protein family Ilyop_2019 PF00885 6,7-dimethyl-8-ribityllumazine synthase Ilyop_2020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Ilyop_2020 PF01872 RibD C-terminal domain Ilyop_2021 PF00677 Lumazine binding domain Ilyop_2022 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Ilyop_2022 PF00925 GTP cyclohydrolase II Ilyop_2027 PF00390 Malic enzyme, N-terminal domain Ilyop_2027 PF03949 Malic enzyme, NAD binding domain Ilyop_2031 PF00959 Phage lysozyme Ilyop_2073 PF08774 VRR-NUC domain Ilyop_2073 PF04851 Type III restriction enzyme, res subunit Ilyop_2074 PF01555 DNA methylase Ilyop_2074 PF18273 Type III R-M EcoP15I C-terminal domain Ilyop_2080 PF03837 RecT family Ilyop_2083 PF00589 Phage integrase family Ilyop_2083 PF02899 Phage integrase, N-terminal SAM-like domain Ilyop_2086 PF00180 Isocitrate/isopropylmalate dehydrogenase Ilyop_2086 PF18324 Hypothetical protein TT1725 Ilyop_2089 PF00364 Biotin-requiring enzyme Ilyop_2089 PF00682 HMGL-like Ilyop_2089 PF02436 Conserved carboxylase domain Ilyop_2090 PF01554 MatE Ilyop_2092 PF07005 Sugar-binding N-terminal domain Ilyop_2092 PF17042 Nucleotide-binding C-terminal domain Ilyop_2094 PF00180 Isocitrate/isopropylmalate dehydrogenase Ilyop_2096 PF00180 Isocitrate/isopropylmalate dehydrogenase Ilyop_2097 PF04303 PrpF protein Ilyop_2099 PF00330 Aconitase family (aconitate hydratase) Ilyop_2100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ilyop_2100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ilyop_2101 PF03390 2-hydroxycarboxylate transporter family Ilyop_2103 PF00596 Class II Aldolase and Adducin N-terminal domain Ilyop_2104 PF03788 LrgA family Ilyop_2105 PF04172 LrgB-like family Ilyop_2106 PF03466 LysR substrate binding domain Ilyop_2106 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ilyop_2108 PF01012 Electron transfer flavoprotein domain Ilyop_2108 PF00766 Electron transfer flavoprotein FAD-binding domain Ilyop_2110 PF02770 Acyl-CoA dehydrogenase, middle domain Ilyop_2110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Ilyop_2110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Ilyop_2111 PF01575 MaoC like domain Ilyop_2113 PF00108 Thiolase, N-terminal domain Ilyop_2113 PF02803 Thiolase, C-terminal domain Ilyop_2114 PF01144 Coenzyme A transferase Ilyop_2115 PF01144 Coenzyme A transferase Ilyop_2117 PF02667 Short chain fatty acid transporter Ilyop_2118 PF01116 Fructose-bisphosphate aldolase class-II Ilyop_2119 PF00294 pfkB family carbohydrate kinase Ilyop_2120 PF02653 Branched-chain amino acid transport system / permease component Ilyop_2121 PF00005 ABC transporter Ilyop_2122 PF13407 Periplasmic binding protein domain Ilyop_2123 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ilyop_2123 PF00205 Thiamine pyrophosphate enzyme, central domain Ilyop_2123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_2124 PF01261 Xylose isomerase-like TIM barrel Ilyop_2125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Ilyop_2125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Ilyop_2126 PF00455 DeoR C terminal sensor domain Ilyop_2126 PF08220 DeoR-like helix-turn-helix domain Ilyop_2128 PF01261 Xylose isomerase-like TIM barrel Ilyop_2130 PF01547 Bacterial extracellular solute-binding protein Ilyop_2133 PF00356 Bacterial regulatory proteins, lacI family Ilyop_2135 PF07883 Cupin domain Ilyop_2138 PF00474 Sodium:solute symporter family Ilyop_2142 PF03401 Tripartite tricarboxylate transporter family receptor Ilyop_2144 PF01970 Tripartite tricarboxylate transporter TctA family Ilyop_2145 PF03928 Haem-degrading Ilyop_2146 PF00465 Iron-containing alcohol dehydrogenase Ilyop_2148 PF00107 Zinc-binding dehydrogenase Ilyop_2148 PF08240 Alcohol dehydrogenase GroES-like domain Ilyop_2151 PF00155 Aminotransferase class I and II Ilyop_2152 PF00881 Nitroreductase family Ilyop_2161 PF00294 pfkB family carbohydrate kinase Ilyop_2162 PF01081 KDPG and KHG aldolase Ilyop_2164 PF04074 YhcH/YjgK/YiaL Ilyop_2165 PF11799 impB/mucB/samB family C-terminal domain Ilyop_2165 PF00817 impB/mucB/samB family Ilyop_2166 PF02127 Aminopeptidase I zinc metalloprotease (M18) Ilyop_2167 PF00072 Response regulator receiver domain Ilyop_2167 PF00486 Transcriptional regulatory protein, C terminal Ilyop_2168 PF16736 Single Cache-like Ilyop_2168 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2168 PF00989 PAS fold Ilyop_2170 PF00501 AMP-binding enzyme Ilyop_2170 PF13193 AMP-binding enzyme C-terminal domain Ilyop_2171 PF13193 AMP-binding enzyme C-terminal domain Ilyop_2171 PF00501 AMP-binding enzyme Ilyop_2172 PF04542 Sigma-70 region 2 Ilyop_2172 PF08281 Sigma-70, region 4 Ilyop_2177 PF01226 Formate/nitrite transporter Ilyop_2178 PF02789 Cytosol aminopeptidase family, N-terminal domain Ilyop_2178 PF00883 Cytosol aminopeptidase family, catalytic domain Ilyop_2179 PF02901 Pyruvate formate lyase-like Ilyop_2179 PF01228 Glycine radical Ilyop_2180 PF13302 Acetyltransferase (GNAT) domain Ilyop_2183 PF02562 PhoH-like protein Ilyop_2183 PF13638 PIN domain Ilyop_2184 PF00994 Probable molybdopterin binding domain Ilyop_2185 PF12849 PBP superfamily domain Ilyop_2186 PF12849 PBP superfamily domain Ilyop_2187 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2188 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2189 PF00005 ABC transporter Ilyop_2190 PF01895 PhoU domain Ilyop_2191 PF00072 Response regulator receiver domain Ilyop_2191 PF00486 Transcriptional regulatory protein, C terminal Ilyop_2196 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ilyop_2196 PF02844 Phosphoribosylglycinamide synthetase, N domain Ilyop_2196 PF02843 Phosphoribosylglycinamide synthetase, C domain Ilyop_2197 PF02142 MGS-like domain Ilyop_2197 PF01808 AICARFT/IMPCHase bienzyme Ilyop_2198 PF00551 Formyl transferase Ilyop_2199 PF00586 AIR synthase related protein, N-terminal domain Ilyop_2199 PF02769 AIR synthase related protein, C-terminal domain Ilyop_2200 PF00156 Phosphoribosyl transferase domain Ilyop_2201 PF01259 SAICAR synthetase Ilyop_2202 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Ilyop_2202 PF02222 ATP-grasp domain Ilyop_2203 PF00731 AIR carboxylase Ilyop_2204 PF00586 AIR synthase related protein, N-terminal domain Ilyop_2204 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Ilyop_2204 PF02769 AIR synthase related protein, C-terminal domain Ilyop_2205 PF01268 Formate--tetrahydrofolate ligase Ilyop_2207 PF00117 Glutamine amidotransferase class-I Ilyop_2207 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Ilyop_2208 PF02142 MGS-like domain Ilyop_2208 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ilyop_2208 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ilyop_2210 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2210 PF00563 EAL domain Ilyop_2210 PF03707 Bacterial signalling protein N terminal repeat Ilyop_2211 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ilyop_2212 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2213 PF12911 N-terminal TM domain of oligopeptide transport permease C Ilyop_2213 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2214 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_2214 PF00005 ABC transporter Ilyop_2215 PF00005 ABC transporter Ilyop_2215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_2216 PF13187 4Fe-4S dicluster domain Ilyop_2216 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Ilyop_2216 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ilyop_2217 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ilyop_2217 PF00175 Oxidoreductase NAD-binding domain Ilyop_2218 PF17179 4Fe-4S dicluster domain Ilyop_2219 PF01226 Formate/nitrite transporter Ilyop_2220 PF00027 Cyclic nucleotide-binding domain Ilyop_2220 PF13545 Crp-like helix-turn-helix domain Ilyop_2222 PF01661 Macro domain Ilyop_2223 PF00465 Iron-containing alcohol dehydrogenase Ilyop_2224 PF00175 Oxidoreductase NAD-binding domain Ilyop_2224 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ilyop_2225 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ilyop_2227 PF03707 Bacterial signalling protein N terminal repeat Ilyop_2227 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2227 PF00563 EAL domain Ilyop_2228 PF02664 S-Ribosylhomocysteinase (LuxS) Ilyop_2229 PF17912 MalK OB fold domain Ilyop_2229 PF00005 ABC transporter Ilyop_2232 PF02653 Branched-chain amino acid transport system / permease component Ilyop_2233 PF00005 ABC transporter Ilyop_2236 PF02581 Thiamine monophosphate synthase Ilyop_2236 PF17792 ThiD2 family Ilyop_2237 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2237 PF08448 PAS fold Ilyop_2242 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Ilyop_2242 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Ilyop_2242 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Ilyop_2244 PF07963 Prokaryotic N-terminal methylation motif Ilyop_2244 PF00114 Pilin (bacterial filament) Ilyop_2245 PF13361 UvrD-like helicase C-terminal domain Ilyop_2245 PF00580 UvrD/REP helicase N-terminal domain Ilyop_2247 PF03600 Citrate transporter Ilyop_2249 PF00924 Mechanosensitive ion channel Ilyop_2250 PF12320 Type 5 capsule protein repressor C-terminal domain Ilyop_2250 PF00149 Calcineurin-like phosphoesterase Ilyop_2251 PF13175 AAA ATPase domain Ilyop_2253 PF03060 Nitronate monooxygenase Ilyop_2254 PF02581 Thiamine monophosphate synthase Ilyop_2255 PF02811 PHP domain Ilyop_2256 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2256 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ilyop_2257 PF00310 Glutamine amidotransferases class-II Ilyop_2257 PF01645 Conserved region in glutamate synthase Ilyop_2257 PF04898 Glutamate synthase central domain Ilyop_2257 PF01493 GXGXG motif Ilyop_2260 PF01168 Alanine racemase, N-terminal domain Ilyop_2263 PF00072 Response regulator receiver domain Ilyop_2265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Ilyop_2265 PF00391 PEP-utilising enzyme, mobile domain Ilyop_2265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Ilyop_2265 PF00391 PEP-utilising enzyme, mobile domain Ilyop_2267 PF12833 Helix-turn-helix domain Ilyop_2271 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Ilyop_2272 PF02378 Phosphotransferase system, EIIC Ilyop_2272 PF00367 phosphotransferase system, EIIB Ilyop_2273 PF08244 Glycosyl hydrolases family 32 C terminal Ilyop_2273 PF00251 Glycosyl hydrolases family 32 N-terminal domain Ilyop_2274 PF00294 pfkB family carbohydrate kinase Ilyop_2275 PF06508 Queuosine biosynthesis protein QueC Ilyop_2276 PF01227 GTP cyclohydrolase I Ilyop_2277 PF04055 Radical SAM superfamily Ilyop_2279 PF01869 BadF/BadG/BcrA/BcrD ATPase family Ilyop_2281 PF12801 4Fe-4S binding domain Ilyop_2284 PF00890 FAD binding domain Ilyop_2284 PF02910 Fumarate reductase flavoprotein C-term Ilyop_2285 PF02910 Fumarate reductase flavoprotein C-term Ilyop_2285 PF00890 FAD binding domain Ilyop_2286 PF02910 Fumarate reductase flavoprotein C-term Ilyop_2286 PF00890 FAD binding domain Ilyop_2287 PF02416 mttA/Hcf106 family Ilyop_2288 PF00902 Sec-independent protein translocase protein (TatC) Ilyop_2293 PF01638 HxlR-like helix-turn-helix Ilyop_2295 PF01266 FAD dependent oxidoreductase Ilyop_2295 PF04324 BFD-like [2Fe-2S] binding domain Ilyop_2296 PF13488 Glycine zipper Ilyop_2296 PF00691 OmpA family Ilyop_2299 PF17131 Outer membrane lipoprotein-sorting protein Ilyop_2302 PF01206 Sulfurtransferase TusA Ilyop_2303 PF00586 AIR synthase related protein, N-terminal domain Ilyop_2303 PF02769 AIR synthase related protein, C-terminal domain Ilyop_2304 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Ilyop_2304 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ilyop_2304 PF18267 Rubredoxin NAD+ reductase C-terminal domain Ilyop_2304 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2304 PF04324 BFD-like [2Fe-2S] binding domain Ilyop_2305 PF03976 Polyphosphate kinase 2 (PPK2) Ilyop_2306 PF02541 Ppx/GppA phosphatase family Ilyop_2310 PF13493 Domain of unknown function (DUF4118) Ilyop_2310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2310 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2310 PF13426 PAS domain Ilyop_2310 PF00989 PAS fold Ilyop_2310 PF08447 PAS fold Ilyop_2311 PF00072 Response regulator receiver domain Ilyop_2312 PF02743 Cache domain Ilyop_2312 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2312 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2313 PF01966 HD domain Ilyop_2313 PF00072 Response regulator receiver domain Ilyop_2314 PF01966 HD domain Ilyop_2314 PF00672 HAMP domain Ilyop_2316 PF00483 Nucleotidyl transferase Ilyop_2317 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Ilyop_2318 PF04321 RmlD substrate binding domain Ilyop_2319 PF16363 GDP-mannose 4,6 dehydratase Ilyop_2321 PF03167 Uracil DNA glycosylase superfamily Ilyop_2322 PF01510 N-acetylmuramoyl-L-alanine amidase Ilyop_2323 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Ilyop_2323 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Ilyop_2324 PF00890 FAD binding domain Ilyop_2325 PF02445 Quinolinate synthetase A protein Ilyop_2326 PF02554 Carbon starvation protein CstA Ilyop_2327 PF01544 CorA-like Mg2+ transporter protein Ilyop_2332 PF02810 SEC-C motif Ilyop_2333 PF03006 Haemolysin-III related Ilyop_2334 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Ilyop_2335 PF09308 LuxQ, periplasmic Ilyop_2335 PF00072 Response regulator receiver domain Ilyop_2335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2335 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2336 PF05175 Methyltransferase small domain Ilyop_2337 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2338 PF01740 STAS domain Ilyop_2338 PF00916 Sulfate permease family Ilyop_2340 PF00072 Response regulator receiver domain Ilyop_2340 PF00486 Transcriptional regulatory protein, C terminal Ilyop_2341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2341 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2341 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Ilyop_2341 PF00672 HAMP domain Ilyop_2341 PF00072 Response regulator receiver domain Ilyop_2341 PF01627 Hpt domain Ilyop_2342 PF13237 4Fe-4S dicluster domain Ilyop_2342 PF10531 SLBB domain Ilyop_2342 PF13375 RnfC Barrel sandwich hybrid domain Ilyop_2342 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ilyop_2345 PF00465 Iron-containing alcohol dehydrogenase Ilyop_2346 PF00936 BMC domain Ilyop_2347 PF02286 Dehydratase large subunit Ilyop_2348 PF02288 Dehydratase medium subunit Ilyop_2349 PF02287 Dehydratase small subunit Ilyop_2350 PF18427 DD-reactivating factor swiveling domain Ilyop_2350 PF08841 Diol dehydratase reactivase ATPase-like domain Ilyop_2352 PF00936 BMC domain Ilyop_2353 PF00936 BMC domain Ilyop_2354 PF06130 Phosphate propanoyltransferase Ilyop_2357 PF01923 Cobalamin adenosyltransferase Ilyop_2358 PF00171 Aldehyde dehydrogenase family Ilyop_2361 PF00230 Major intrinsic protein Ilyop_2362 PF02659 Putative manganese efflux pump Ilyop_2363 PF07685 CobB/CobQ-like glutamine amidotransferase domain Ilyop_2364 PF02570 Precorrin-8X methylmutase Ilyop_2365 PF01888 CbiD Ilyop_2367 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ilyop_2368 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ilyop_2369 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ilyop_2370 PF11760 Cobalamin synthesis G N-terminal Ilyop_2370 PF11761 Cobalamin biosynthesis central region Ilyop_2370 PF01890 Cobalamin synthesis G C-terminus Ilyop_2371 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ilyop_2371 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ilyop_2372 PF02571 Precorrin-6x reductase CbiJ/CobK Ilyop_2374 PF03186 CobD/Cbib protein Ilyop_2375 PF00155 Aminotransferase class I and II Ilyop_2376 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Ilyop_2376 PF01488 Shikimate / quinate 5-dehydrogenase Ilyop_2377 PF03900 Porphobilinogen deaminase, C-terminal domain Ilyop_2377 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Ilyop_2379 PF00490 Delta-aminolevulinic acid dehydratase Ilyop_2380 PF00202 Aminotransferase class-III Ilyop_2381 PF04960 Glutaminase Ilyop_2382 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ilyop_2383 PF18419 ATP-grasp-like domain Ilyop_2383 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ilyop_2383 PF04262 Glutamate-cysteine ligase Ilyop_2384 PF01554 MatE Ilyop_2385 PF10414 Sirohaem synthase dimerisation region Ilyop_2385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ilyop_2386 PF00072 Response regulator receiver domain Ilyop_2386 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2387 PF00873 AcrB/AcrD/AcrF family Ilyop_2389 PF00950 ABC 3 transport family Ilyop_2390 PF00005 ABC transporter Ilyop_2391 PF01297 Zinc-uptake complex component A periplasmic Ilyop_2392 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2393 PF01966 HD domain Ilyop_2393 PF00672 HAMP domain Ilyop_2395 PF01894 Uncharacterised protein family UPF0047 Ilyop_2396 PF00989 PAS fold Ilyop_2396 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Ilyop_2396 PF17203 Single cache domain 3 Ilyop_2396 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2397 PF00072 Response regulator receiver domain Ilyop_2397 PF04703 FaeA-like protein Ilyop_2398 PF03390 2-hydroxycarboxylate transporter family Ilyop_2401 PF00498 FHA domain Ilyop_2401 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2401 PF00563 EAL domain Ilyop_2402 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2403 PF10417 C-terminal domain of 1-Cys peroxiredoxin Ilyop_2403 PF00578 AhpC/TSA family Ilyop_2405 PF18152 DAHP synthase ferredoxin-like domain Ilyop_2405 PF00793 DAHP synthetase I family Ilyop_2406 PF02153 Prephenate dehydrogenase Ilyop_2407 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ilyop_2408 PF00800 Prephenate dehydratase Ilyop_2408 PF01817 Chorismate mutase type II Ilyop_2410 PF01264 Chorismate synthase Ilyop_2411 PF01202 Shikimate kinase Ilyop_2413 PF00117 Glutamine amidotransferase class-I Ilyop_2414 PF02885 Glycosyl transferase family, helical bundle domain Ilyop_2414 PF00591 Glycosyl transferase family, a/b domain Ilyop_2416 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Ilyop_2417 PF00291 Pyridoxal-phosphate dependent enzyme Ilyop_2418 PF00290 Tryptophan synthase alpha chain Ilyop_2419 PF00085 Thioredoxin Ilyop_2420 PF00675 Insulinase (Peptidase family M16) Ilyop_2420 PF05193 Peptidase M16 inactive domain Ilyop_2423 PF01053 Cys/Met metabolism PLP-dependent enzyme Ilyop_2424 PF02219 Methylenetetrahydrofolate reductase Ilyop_2425 PF04204 Homoserine O-succinyltransferase Ilyop_2426 PF00696 Amino acid kinase family Ilyop_2426 PF13840 ACT domain Ilyop_2426 PF01842 ACT domain Ilyop_2427 PF02310 B12 binding domain Ilyop_2427 PF02607 B12 binding domain Ilyop_2427 PF00809 Pterin binding enzyme Ilyop_2427 PF02574 Homocysteine S-methyltransferase Ilyop_2427 PF02965 Vitamin B12 dependent methionine synthase, activation domain Ilyop_2428 PF02082 Transcriptional regulator Ilyop_2429 PF00892 EamA-like transporter family Ilyop_2430 PF00313 'Cold-shock' DNA-binding domain Ilyop_2431 PF12838 4Fe-4S dicluster domain Ilyop_2431 PF02256 Iron hydrogenase small subunit Ilyop_2431 PF02906 Iron only hydrogenase large subunit, C-terminal domain Ilyop_2432 PF04193 PQ loop repeat Ilyop_2433 PF04474 Protein of unknown function (DUF554) Ilyop_2437 PF02899 Phage integrase, N-terminal SAM-like domain Ilyop_2437 PF00589 Phage integrase family Ilyop_2440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2440 PF00672 HAMP domain Ilyop_2440 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2441 PF00486 Transcriptional regulatory protein, C terminal Ilyop_2441 PF00072 Response regulator receiver domain Ilyop_2442 PF00535 Glycosyl transferase family 2 Ilyop_2443 PF02684 Lipid-A-disaccharide synthetase Ilyop_2443 PF07578 Lipid A Biosynthesis N-terminal domain Ilyop_2446 PF01370 NAD dependent epimerase/dehydratase family Ilyop_2449 PF01027 Inhibitor of apoptosis-promoting Bax1 Ilyop_2452 PF02028 BCCT, betaine/carnitine/choline family transporter Ilyop_2459 PF01880 Desulfoferrodoxin Ilyop_2459 PF06397 Desulfoferrodoxin, N-terminal domain Ilyop_2461 PF00258 Flavodoxin Ilyop_2461 PF00753 Metallo-beta-lactamase superfamily Ilyop_2461 PF00301 Rubredoxin Ilyop_2462 PF01566 Natural resistance-associated macrophage protein Ilyop_2464 PF00440 Bacterial regulatory proteins, tetR family Ilyop_2464 PF16925 Tetracyclin repressor-like, C-terminal domain Ilyop_2465 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2466 PF00085 Thioredoxin Ilyop_2469 PF07690 Major Facilitator Superfamily Ilyop_2470 PF01323 DSBA-like thioredoxin domain Ilyop_2474 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2478 PF12848 ABC transporter Ilyop_2478 PF00005 ABC transporter Ilyop_2479 PF02607 B12 binding domain Ilyop_2479 PF13411 MerR HTH family regulatory protein Ilyop_2480 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2480 PF07694 5TMR of 5TMR-LYT Ilyop_2481 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Ilyop_2483 PF10369 Small subunit of acetolactate synthase Ilyop_2484 PF00205 Thiamine pyrophosphate enzyme, central domain Ilyop_2484 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ilyop_2484 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_2485 PF00156 Phosphoribosyl transferase domain Ilyop_2486 PF01979 Amidohydrolase family Ilyop_2487 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Ilyop_2488 PF01180 Dihydroorotate dehydrogenase Ilyop_2489 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ilyop_2490 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Ilyop_2490 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Ilyop_2491 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Ilyop_2491 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ilyop_2493 PF08411 Exonuclease C-terminal Ilyop_2493 PF00929 Exonuclease Ilyop_2494 PF01177 Asp/Glu/Hydantoin racemase Ilyop_2495 PF03616 Sodium/glutamate symporter Ilyop_2496 PF09997 Predicted membrane protein (DUF2238) Ilyop_2497 PF04397 LytTr DNA-binding domain Ilyop_2497 PF00072 Response regulator receiver domain Ilyop_2498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2498 PF06580 Histidine kinase Ilyop_2498 PF07694 5TMR of 5TMR-LYT Ilyop_2502 PF08240 Alcohol dehydrogenase GroES-like domain Ilyop_2502 PF00107 Zinc-binding dehydrogenase Ilyop_2503 PF00364 Biotin-requiring enzyme Ilyop_2503 PF00289 Biotin carboxylase, N-terminal domain Ilyop_2503 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ilyop_2503 PF02785 Biotin carboxylase C-terminal domain Ilyop_2503 PF02436 Conserved carboxylase domain Ilyop_2503 PF00682 HMGL-like Ilyop_2505 PF12544 Lysine-2,3-aminomutase Ilyop_2505 PF04055 Radical SAM superfamily Ilyop_2506 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Ilyop_2506 PF01276 Orn/Lys/Arg decarboxylase, major domain Ilyop_2509 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2510 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2510 PF12911 N-terminal TM domain of oligopeptide transport permease C Ilyop_2511 PF00005 ABC transporter Ilyop_2511 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_2512 PF00005 ABC transporter Ilyop_2512 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ilyop_2513 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ilyop_2514 PF03600 Citrate transporter Ilyop_2515 PF00923 Transaldolase/Fructose-6-phosphate aldolase Ilyop_2516 PF01235 Sodium:alanine symporter family Ilyop_2517 PF00781 Diacylglycerol kinase catalytic domain Ilyop_2518 PF00485 Phosphoribulokinase / Uridine kinase family Ilyop_2519 PF02767 DNA polymerase III beta subunit, central domain Ilyop_2519 PF02768 DNA polymerase III beta subunit, C-terminal domain Ilyop_2519 PF00712 DNA polymerase III beta subunit, N-terminal domain Ilyop_2520 PF17763 Glutaminase/Asparaginase C-terminal domain Ilyop_2520 PF00710 Asparaginase, N-terminal Ilyop_2522 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2522 PF00989 PAS fold Ilyop_2522 PF00672 HAMP domain Ilyop_2522 PF18698 Histidine kinase sensor domain Ilyop_2522 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2523 PF00486 Transcriptional regulatory protein, C terminal Ilyop_2523 PF00072 Response regulator receiver domain Ilyop_2527 PF00924 Mechanosensitive ion channel Ilyop_2527 PF05552 Conserved TM helix Ilyop_2528 PF18318 Glutamine synthetase C-terminal domain Ilyop_2528 PF12437 Glutamine synthetase type III N terminal Ilyop_2528 PF00120 Glutamine synthetase, catalytic domain Ilyop_2531 PF02190 ATP-dependent protease La (LON) substrate-binding domain Ilyop_2531 PF00004 ATPase family associated with various cellular activities (AAA) Ilyop_2531 PF05362 Lon protease (S16) C-terminal proteolytic domain Ilyop_2532 PF13396 Phospholipase_D-nuclease N-terminal Ilyop_2532 PF13091 PLD-like domain Ilyop_2534 PF13472 GDSL-like Lipase/Acylhydrolase family Ilyop_2535 PF13411 MerR HTH family regulatory protein Ilyop_2536 PF00873 AcrB/AcrD/AcrF family Ilyop_2540 PF03807 NADP oxidoreductase coenzyme F420-dependent Ilyop_2540 PF14748 Pyrroline-5-carboxylate reductase dimerisation Ilyop_2541 PF02824 TGS domain Ilyop_2541 PF13291 ACT domain Ilyop_2541 PF04607 Region found in RelA / SpoT proteins Ilyop_2545 PF17783 CvfB-like winged helix domain Ilyop_2545 PF13509 S1 domain Ilyop_2547 PF00403 Heavy-metal-associated domain Ilyop_2549 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Ilyop_2550 PF05552 Conserved TM helix Ilyop_2551 PF00924 Mechanosensitive ion channel Ilyop_2551 PF05552 Conserved TM helix Ilyop_2553 PF00072 Response regulator receiver domain Ilyop_2553 PF08664 YcbB domain Ilyop_2554 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2557 PF00202 Aminotransferase class-III Ilyop_2558 PF00890 FAD binding domain Ilyop_2558 PF02910 Fumarate reductase flavoprotein C-term Ilyop_2560 PF00175 Oxidoreductase NAD-binding domain Ilyop_2560 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ilyop_2562 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ilyop_2562 PF12838 4Fe-4S dicluster domain Ilyop_2562 PF13375 RnfC Barrel sandwich hybrid domain Ilyop_2564 PF01593 Flavin containing amine oxidoreductase Ilyop_2567 PF10415 Fumarase C C-terminus Ilyop_2567 PF00206 Lyase Ilyop_2570 PF13847 Methyltransferase domain Ilyop_2571 PF00581 Rhodanese-like domain Ilyop_2575 PF02915 Rubrerythrin Ilyop_2578 PF01613 Flavin reductase like domain Ilyop_2580 PF00114 Pilin (bacterial filament) Ilyop_2580 PF07963 Prokaryotic N-terminal methylation motif Ilyop_2581 PF07963 Prokaryotic N-terminal methylation motif Ilyop_2581 PF00114 Pilin (bacterial filament) Ilyop_2585 PF03841 L-seryl-tRNA selenium transferase Ilyop_2585 PF12390 Selenocysteine synthase N terminal Ilyop_2586 PF09106 Elongation factor SelB, winged helix Ilyop_2586 PF09105 Elongation factor SelB, winged helix Ilyop_2586 PF09107 Elongation factor SelB, winged helix Ilyop_2586 PF00009 Elongation factor Tu GTP binding domain Ilyop_2586 PF03144 Elongation factor Tu domain 2 Ilyop_2587 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ilyop_2587 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Ilyop_2588 PF00202 Aminotransferase class-III Ilyop_2589 PF00696 Amino acid kinase family Ilyop_2590 PF02142 MGS-like domain Ilyop_2590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ilyop_2590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ilyop_2591 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Ilyop_2591 PF00117 Glutamine amidotransferase class-I Ilyop_2592 PF01960 ArgJ family Ilyop_2593 PF02774 Semialdehyde dehydrogenase, dimerisation domain Ilyop_2593 PF01118 Semialdehyde dehydrogenase, NAD binding domain Ilyop_2595 PF01812 5-formyltetrahydrofolate cyclo-ligase family Ilyop_2598 PF00465 Iron-containing alcohol dehydrogenase Ilyop_2599 PF00202 Aminotransferase class-III Ilyop_2600 PF13520 Amino acid permease Ilyop_2603 PF00180 Isocitrate/isopropylmalate dehydrogenase Ilyop_2604 PF00892 EamA-like transporter family Ilyop_2605 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Ilyop_2607 PF08207 Elongation factor P (EF-P) KOW-like domain Ilyop_2607 PF09285 Elongation factor P, C-terminal Ilyop_2607 PF01132 Elongation factor P (EF-P) OB domain Ilyop_2609 PF09827 CRISPR associated protein Cas2 Ilyop_2610 PF01867 CRISPR associated protein Cas1 Ilyop_2611 PF13395 HNH endonuclease Ilyop_2611 PF18541 RuvC endonuclease subdomain 3 Ilyop_2612 PF01554 MatE Ilyop_2614 PF03737 Aldolase/RraA Ilyop_2616 PF13419 Haloacid dehalogenase-like hydrolase Ilyop_2619 PF00005 ABC transporter Ilyop_2620 PF01032 FecCD transport family Ilyop_2623 PF00005 ABC transporter Ilyop_2623 PF00664 ABC transporter transmembrane region Ilyop_2627 PF14492 Elongation Factor G, domain II Ilyop_2627 PF00679 Elongation factor G C-terminus Ilyop_2627 PF03144 Elongation factor Tu domain 2 Ilyop_2627 PF00009 Elongation factor Tu GTP binding domain Ilyop_2627 PF03764 Elongation factor G, domain IV Ilyop_2628 PF00563 EAL domain Ilyop_2628 PF03707 Bacterial signalling protein N terminal repeat Ilyop_2628 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2632 PF00216 Bacterial DNA-binding protein Ilyop_2633 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2633 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ilyop_2637 PF01022 Bacterial regulatory protein, arsR family Ilyop_2638 PF00011 Hsp20/alpha crystallin family Ilyop_2645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ilyop_2645 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2648 PF00860 Permease family Ilyop_2649 PF13091 PLD-like domain Ilyop_2650 PF00440 Bacterial regulatory proteins, tetR family Ilyop_2650 PF17754 MftR C-terminal domain Ilyop_2652 PF00106 short chain dehydrogenase Ilyop_2654 PF01212 Beta-eliminating lyase Ilyop_2655 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ilyop_2655 PF00403 Heavy-metal-associated domain Ilyop_2656 PF00581 Rhodanese-like domain Ilyop_2658 PF00005 ABC transporter Ilyop_2662 PF00294 pfkB family carbohydrate kinase Ilyop_2663 PF04227 Indigoidine synthase A like protein Ilyop_2664 PF00155 Aminotransferase class I and II Ilyop_2665 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_2665 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Ilyop_2665 PF14602 Hexapeptide repeat of succinyl-transferase Ilyop_2666 PF01113 Dihydrodipicolinate reductase, N-terminus Ilyop_2666 PF05173 Dihydrodipicolinate reductase, C-terminus Ilyop_2667 PF00701 Dihydrodipicolinate synthetase family Ilyop_2668 PF02774 Semialdehyde dehydrogenase, dimerisation domain Ilyop_2668 PF01118 Semialdehyde dehydrogenase, NAD binding domain Ilyop_2669 PF01678 Diaminopimelate epimerase Ilyop_2670 PF00696 Amino acid kinase family Ilyop_2670 PF01842 ACT domain Ilyop_2670 PF13840 ACT domain Ilyop_2671 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ilyop_2671 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ilyop_2672 PF07687 Peptidase dimerisation domain Ilyop_2672 PF01546 Peptidase family M20/M25/M40 Ilyop_2674 PF00266 Aminotransferase class-V Ilyop_2675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ilyop_2675 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2678 PF01264 Chorismate synthase Ilyop_2681 PF00534 Glycosyl transferases group 1 Ilyop_2681 PF13439 Glycosyltransferase Family 4 Ilyop_2682 PF00535 Glycosyl transferase family 2 Ilyop_2683 PF00534 Glycosyl transferases group 1 Ilyop_2687 PF01370 NAD dependent epimerase/dehydratase family Ilyop_2688 PF03033 Glycosyltransferase family 28 N-terminal domain Ilyop_2688 PF04101 Glycosyltransferase family 28 C-terminal domain Ilyop_2689 PF16363 GDP-mannose 4,6 dehydratase Ilyop_2690 PF02397 Bacterial sugar transferase Ilyop_2697 PF09924 Uncharacterised conserved protein (DUF2156) Ilyop_2697 PF03706 Lysylphosphatidylglycerol synthase TM region Ilyop_2699 PF13393 Histidyl-tRNA synthetase Ilyop_2700 PF01634 ATP phosphoribosyltransferase Ilyop_2701 PF00815 Histidinol dehydrogenase Ilyop_2702 PF00155 Aminotransferase class I and II Ilyop_2703 PF00475 Imidazoleglycerol-phosphate dehydratase Ilyop_2704 PF00117 Glutamine amidotransferase class-I Ilyop_2705 PF00977 Histidine biosynthesis protein Ilyop_2707 PF01502 Phosphoribosyl-AMP cyclohydrolase Ilyop_2707 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Ilyop_2712 PF16868 NMT1-like family Ilyop_2714 PF16868 NMT1-like family Ilyop_2715 PF04397 LytTr DNA-binding domain Ilyop_2715 PF00072 Response regulator receiver domain Ilyop_2717 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ilyop_2717 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ilyop_2717 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ilyop_2718 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ilyop_2720 PF07694 5TMR of 5TMR-LYT Ilyop_2720 PF13492 GAF domain Ilyop_2720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2720 PF06580 Histidine kinase Ilyop_2722 PF04055 Radical SAM superfamily Ilyop_2722 PF06968 Biotin and Thiamin Synthesis associated domain Ilyop_2723 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Ilyop_2724 PF00364 Biotin-requiring enzyme Ilyop_2726 PF01039 Carboxyl transferase domain Ilyop_2729 PF02310 B12 binding domain Ilyop_2729 PF01642 Methylmalonyl-CoA mutase Ilyop_2731 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Ilyop_2731 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Ilyop_2732 PF02080 TrkA-C domain Ilyop_2732 PF06826 Predicted Permease Membrane Region Ilyop_2736 PF00005 ABC transporter Ilyop_2737 PF01638 HxlR-like helix-turn-helix Ilyop_2738 PF00317 Ribonucleotide reductase, all-alpha domain Ilyop_2738 PF02867 Ribonucleotide reductase, barrel domain Ilyop_2738 PF03477 ATP cone domain Ilyop_2742 PF01661 Macro domain Ilyop_2743 PF13302 Acetyltransferase (GNAT) domain Ilyop_2744 PF07883 Cupin domain Ilyop_2744 PF01381 Helix-turn-helix Ilyop_2745 PF01370 NAD dependent epimerase/dehydratase family Ilyop_2746 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) Ilyop_2749 PF16363 GDP-mannose 4,6 dehydratase Ilyop_2750 PF00483 Nucleotidyl transferase Ilyop_2751 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Ilyop_2752 PF00132 Bacterial transferase hexapeptide (six repeats) Ilyop_2753 PF00535 Glycosyl transferase family 2 Ilyop_2755 PF00535 Glycosyl transferase family 2 Ilyop_2764 PF04607 Region found in RelA / SpoT proteins Ilyop_2765 PF01243 Pyridoxamine 5'-phosphate oxidase Ilyop_2765 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Ilyop_2768 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2769 PF00528 Binding-protein-dependent transport system inner membrane component Ilyop_2770 PF13416 Bacterial extracellular solute-binding protein Ilyop_2771 PF00581 Rhodanese-like domain Ilyop_2772 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2772 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ilyop_2773 PF00581 Rhodanese-like domain Ilyop_2775 PF09335 SNARE associated Golgi protein Ilyop_2776 PF00962 Adenosine/AMP deaminase Ilyop_2779 PF16363 GDP-mannose 4,6 dehydratase Ilyop_2780 PF01926 50S ribosome-binding GTPase Ilyop_2780 PF13167 GTP-binding GTPase N-terminal Ilyop_2780 PF16360 GTP-binding GTPase Middle Region Ilyop_2781 PF02690 Na+/Pi-cotransporter Ilyop_2782 PF00571 CBS domain Ilyop_2782 PF00478 IMP dehydrogenase / GMP reductase domain Ilyop_2783 PF07724 AAA domain (Cdc48 subfamily) Ilyop_2783 PF00004 ATPase family associated with various cellular activities (AAA) Ilyop_2783 PF02861 Clp amino terminal domain, pathogenicity island component Ilyop_2783 PF10431 C-terminal, D2-small domain, of ClpB protein Ilyop_2783 PF17871 AAA lid domain Ilyop_2786 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Ilyop_2787 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Ilyop_2787 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Ilyop_2788 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Ilyop_2788 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Ilyop_2793 PF00266 Aminotransferase class-V Ilyop_2795 PF01726 LexA DNA binding domain Ilyop_2795 PF00717 Peptidase S24-like Ilyop_2797 PF02666 Phosphatidylserine decarboxylase Ilyop_2798 PF02142 MGS-like domain Ilyop_2800 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Ilyop_2800 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Ilyop_2800 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain Ilyop_2801 PF02580 D-Tyr-tRNA(Tyr) deacylase Ilyop_2802 PF00216 Bacterial DNA-binding protein Ilyop_2803 PF00285 Citrate synthase, C-terminal domain Ilyop_2809 PF13614 AAA domain Ilyop_2814 PF00360 Phytochrome region Ilyop_2814 PF00563 EAL domain Ilyop_2814 PF01590 GAF domain Ilyop_2814 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2816 PF01966 HD domain Ilyop_2816 PF00672 HAMP domain Ilyop_2818 PF00301 Rubredoxin Ilyop_2819 PF00037 4Fe-4S binding domain Ilyop_2820 PF03063 Prismane/CO dehydrogenase family Ilyop_2821 PF00301 Rubredoxin Ilyop_2822 PF00258 Flavodoxin Ilyop_2822 PF00753 Metallo-beta-lactamase superfamily Ilyop_2822 PF00301 Rubredoxin Ilyop_2827 PF07731 Multicopper oxidase Ilyop_2827 PF07732 Multicopper oxidase Ilyop_2830 PF02627 Carboxymuconolactone decarboxylase family Ilyop_2833 PF07731 Multicopper oxidase Ilyop_2833 PF07732 Multicopper oxidase Ilyop_2833 PF00394 Multicopper oxidase Ilyop_2837 PF00486 Transcriptional regulatory protein, C terminal Ilyop_2837 PF00072 Response regulator receiver domain Ilyop_2838 PF00512 His Kinase A (phospho-acceptor) domain Ilyop_2838 PF18719 ArlS sensor domain Ilyop_2838 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ilyop_2839 PF08402 TOBE domain Ilyop_2839 PF00005 ABC transporter Ilyop_2843 PF03600 Citrate transporter Ilyop_2843 PF02080 TrkA-C domain Ilyop_2847 PF01507 Phosphoadenosine phosphosulfate reductase family Ilyop_2848 PF00009 Elongation factor Tu GTP binding domain Ilyop_2854 PF00239 Resolvase, N terminal domain Ilyop_2854 PF02796 Helix-turn-helix domain of resolvase Ilyop_2856 PF00990 Diguanylate cyclase, GGDEF domain Ilyop_2857 PF18766 SWI2/SNF2 ATPase Ilyop_2857 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Ilyop_2857 PF12008 Type I restriction and modification enzyme - subunit R C terminal Ilyop_2860 PF12161 HsdM N-terminal domain Ilyop_2860 PF02384 N-6 DNA Methylase Ilyop_2865 PF04041 beta-1,4-mannooligosaccharide phosphorylase Ilyop_2866 PF04041 beta-1,4-mannooligosaccharide phosphorylase Ilyop_2867 PF00534 Glycosyl transferases group 1 Ilyop_2867 PF00862 Sucrose synthase Ilyop_2869 PF00872 Transposase, Mutator family Ilyop_2870 PF02796 Helix-turn-helix domain of resolvase Ilyop_2870 PF00239 Resolvase, N terminal domain Ilyop_2878 PF03389 MobA/MobL family Ilyop_2879 PF08780 Nucleotidyltransferase substrate binding protein like Ilyop_2880 PF01726 LexA DNA binding domain Ilyop_2880 PF00717 Peptidase S24-like Ilyop_2884 PF03743 Bacterial conjugation TrbI-like protein Ilyop_2885 PF02534 Type IV secretory system Conjugative DNA transfer Ilyop_2887 PF00437 Type II/IV secretion system protein Ilyop_2889 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Ilyop_2896 PF01131 DNA topoisomerase Ilyop_2896 PF01751 Toprim domain Ilyop_2900 PF02661 Fic/DOC family Ilyop_2900 PF13784 Fic/DOC family N-terminal Ilyop_2901 PF13635 Domain of unknown function (DUF4143) Ilyop_2901 PF13173 AAA domain Ilyop_2906 PF00239 Resolvase, N terminal domain Ilyop_2906 PF02796 Helix-turn-helix domain of resolvase Ilyop_2910 PF00378 Enoyl-CoA hydratase/isomerase Ilyop_2913 PF00107 Zinc-binding dehydrogenase Ilyop_2913 PF08240 Alcohol dehydrogenase GroES-like domain Ilyop_2914 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ilyop_2914 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Ilyop_2919 PF01565 FAD binding domain Ilyop_2919 PF02913 FAD linked oxidases, C-terminal domain Ilyop_2920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ilyop_2920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ilyop_2922 PF01012 Electron transfer flavoprotein domain Ilyop_2923 PF00766 Electron transfer flavoprotein FAD-binding domain Ilyop_2923 PF01012 Electron transfer flavoprotein domain Ilyop_2926 PF04962 KduI/IolB family Ilyop_2927 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Ilyop_2928 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Ilyop_2929 PF03480 Bacterial extracellular solute-binding protein, family 7 Ilyop_2931 PF06250 YhcG PDDEXK nuclease domain Ilyop_2931 PF17761 DUF1016 N-terminal domain Ilyop_2932 PF00239 Resolvase, N terminal domain Ilyop_2932 PF02796 Helix-turn-helix domain of resolvase Ilyop_R0032 PF02028 BCCT, betaine/carnitine/choline family transporter