Ilyop_0015	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
Ilyop_0017	PWY-4261	glycerol degradation I
Ilyop_0033	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_0033	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_0033	PWY-6901	superpathway of glucose and xylose degradation
Ilyop_0033	PWY-7003	glycerol degradation to butanol
Ilyop_0034	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_0034	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_0034	PWY-6886	1-butanol autotrophic biosynthesis
Ilyop_0034	PWY-6901	superpathway of glucose and xylose degradation
Ilyop_0034	PWY-7003	glycerol degradation to butanol
Ilyop_0053	PWY-5480	pyruvate fermentation to ethanol I
Ilyop_0053	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_0053	PWY-5493	reductive monocarboxylic acid cycle
Ilyop_0060	PWY-5480	pyruvate fermentation to ethanol I
Ilyop_0060	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_0060	PWY-5493	reductive monocarboxylic acid cycle
Ilyop_0090	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Ilyop_0090	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ilyop_0094	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Ilyop_0094	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ilyop_0141	PWY-1361	benzoyl-CoA degradation I (aerobic)
Ilyop_0141	PWY-5109	2-methylbutanoate biosynthesis
Ilyop_0141	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Ilyop_0141	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Ilyop_0141	PWY-5177	glutaryl-CoA degradation
Ilyop_0141	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ilyop_0141	PWY-6435	4-hydroxybenzoate biosynthesis V
Ilyop_0141	PWY-6583	pyruvate fermentation to butanol I
Ilyop_0141	PWY-6863	pyruvate fermentation to hexanol
Ilyop_0141	PWY-6883	pyruvate fermentation to butanol II
Ilyop_0141	PWY-6944	androstenedione degradation
Ilyop_0141	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Ilyop_0141	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Ilyop_0141	PWY-7007	methyl ketone biosynthesis
Ilyop_0141	PWY-7046	4-coumarate degradation (anaerobic)
Ilyop_0141	PWY-7094	fatty acid salvage
Ilyop_0141	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Ilyop_0141	PWY-735	jasmonic acid biosynthesis
Ilyop_0141	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Ilyop_0141	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Ilyop_0141	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Ilyop_0141	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Ilyop_0141	PWY-7726	Ilyop_0141
Ilyop_0141	PWY-7778	Ilyop_0141
Ilyop_0141	PWY-7779	Ilyop_0141
Ilyop_0151	PWY-5667	CDP-diacylglycerol biosynthesis I
Ilyop_0151	PWY-5981	CDP-diacylglycerol biosynthesis III
Ilyop_0151	PWY-6453	stigma estolide biosynthesis
Ilyop_0151	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Ilyop_0151	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Ilyop_0151	PWY-7587	oleate biosynthesis III (cyanobacteria)
Ilyop_0151	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
Ilyop_0151	PWY-7782	Ilyop_0151
Ilyop_0152	PWY-5480	pyruvate fermentation to ethanol I
Ilyop_0152	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_0152	PWY-5493	reductive monocarboxylic acid cycle
Ilyop_0166	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_0166	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_0166	PWY-7953	Ilyop_0166
Ilyop_0170	PWY-3341	L-proline biosynthesis III
Ilyop_0170	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Ilyop_0171	PWY-3341	L-proline biosynthesis III
Ilyop_0171	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Ilyop_0183	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ilyop_0186	PWY-7805	Ilyop_0186
Ilyop_0186	PWY-7807	Ilyop_0186
Ilyop_0196	PWY-6123	inosine-5'-phosphate biosynthesis I
Ilyop_0196	PWY-6124	inosine-5'-phosphate biosynthesis II
Ilyop_0196	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ilyop_0196	PWY-7234	inosine-5'-phosphate biosynthesis III
Ilyop_0198	PWY-6749	CMP-legionaminate biosynthesis I
Ilyop_0205	PWY-7980	Ilyop_0205
Ilyop_0207	PWY-7980	Ilyop_0207
Ilyop_0213	PWY-7851	Ilyop_0213
Ilyop_0215	PWY-5269	cardiolipin biosynthesis II
Ilyop_0215	PWY-5668	cardiolipin biosynthesis I
Ilyop_0215	PWY-7817	Ilyop_0215
Ilyop_0218	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ilyop_0218	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Ilyop_0222	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Ilyop_0222	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Ilyop_0223	PWY-7887	Ilyop_0223
Ilyop_0223	PWY-7892	Ilyop_0223
Ilyop_0228	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ilyop_0229	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ilyop_0233	PWY-7805	Ilyop_0233
Ilyop_0233	PWY-7807	Ilyop_0233
Ilyop_0247	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
Ilyop_0255	PWY-6749	CMP-legionaminate biosynthesis I
Ilyop_0260	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ilyop_0297	PWY-6038	citrate degradation
Ilyop_0339	PWY-4983	L-citrulline-nitric oxide cycle
Ilyop_0339	PWY-4984	urea cycle
Ilyop_0339	PWY-5	canavanine biosynthesis
Ilyop_0339	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_0339	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_0340	PWY-4983	L-citrulline-nitric oxide cycle
Ilyop_0340	PWY-4984	urea cycle
Ilyop_0340	PWY-5	canavanine biosynthesis
Ilyop_0340	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_0340	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_0345	PWY-6012	acyl carrier protein metabolism I
Ilyop_0345	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Ilyop_0345	PWY-6289	petrobactin biosynthesis
Ilyop_0349	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ilyop_0365	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ilyop_0372	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_0372	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ilyop_0372	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ilyop_0372	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_0393	PWY-6936	seleno-amino acid biosynthesis
Ilyop_0393	PWY-7274	D-cycloserine biosynthesis
Ilyop_0393	PWY-7870	Ilyop_0393
Ilyop_0397	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Ilyop_0397	PWY-7820	Ilyop_0397
Ilyop_0401	PWY-4381	fatty acid biosynthesis initiation I
Ilyop_0401	PWY-5743	3-hydroxypropanoate cycle
Ilyop_0401	PWY-5744	glyoxylate assimilation
Ilyop_0401	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ilyop_0401	PWY-6722	candicidin biosynthesis
Ilyop_0402	PWY-4381	fatty acid biosynthesis initiation I
Ilyop_0402	PWY-5743	3-hydroxypropanoate cycle
Ilyop_0402	PWY-5744	glyoxylate assimilation
Ilyop_0402	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ilyop_0402	PWY-6722	candicidin biosynthesis
Ilyop_0410	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_0410	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_0412	PWY-5659	GDP-mannose biosynthesis
Ilyop_0412	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Ilyop_0430	PWY-4202	arsenate detoxification I (glutaredoxin)
Ilyop_0430	PWY-5532	adenosine nucleotides degradation IV
Ilyop_0430	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ilyop_0430	PWY-6608	guanosine nucleotides degradation III
Ilyop_0430	PWY-6609	adenine and adenosine salvage III
Ilyop_0430	PWY-6611	adenine and adenosine salvage V
Ilyop_0430	PWY-6620	guanine and guanosine salvage
Ilyop_0430	PWY-6627	salinosporamide A biosynthesis
Ilyop_0430	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Ilyop_0430	PWY-7179	purine deoxyribonucleosides degradation I
Ilyop_0430	PWY-7179-1	purine deoxyribonucleosides degradation
Ilyop_0440	PWY-1622	formaldehyde assimilation I (serine pathway)
Ilyop_0440	PWY-181	photorespiration
Ilyop_0440	PWY-2161	folate polyglutamylation
Ilyop_0440	PWY-2201	folate transformations I
Ilyop_0440	PWY-3661	glycine betaine degradation I
Ilyop_0440	PWY-3661-1	glycine betaine degradation II (mammalian)
Ilyop_0440	PWY-3841	folate transformations II
Ilyop_0440	PWY-5497	purine nucleobases degradation II (anaerobic)
Ilyop_0478	PWY-4261	glycerol degradation I
Ilyop_0481	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ilyop_0482	PWY-3841	folate transformations II
Ilyop_0482	PWY-6614	tetrahydrofolate biosynthesis
Ilyop_0485	PWY-7805	Ilyop_0485
Ilyop_0485	PWY-7807	Ilyop_0485
Ilyop_0505	PWY-5381	pyridine nucleotide cycling (plants)
Ilyop_0505	PWY-7761	Ilyop_0505
Ilyop_0511	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ilyop_0511	PWY-7962	Ilyop_0511
Ilyop_0511	PWY-7971	Ilyop_0511
Ilyop_0511	PWY-7972	Ilyop_0511
Ilyop_0512	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ilyop_0512	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ilyop_0512	PWY-7961	Ilyop_0512
Ilyop_0512	PWY-7963	Ilyop_0512
Ilyop_0512	PWY-7964	Ilyop_0512
Ilyop_0512	PWY-7965	Ilyop_0512
Ilyop_0512	PWY-7966	Ilyop_0512
Ilyop_0512	PWY-7967	Ilyop_0512
Ilyop_0512	PWY-7968	Ilyop_0512
Ilyop_0512	PWY-7969	Ilyop_0512
Ilyop_0512	PWY-7970	Ilyop_0512
Ilyop_0512	PWY-7975	Ilyop_0512
Ilyop_0513	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ilyop_0513	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ilyop_0513	PWY-7961	Ilyop_0513
Ilyop_0513	PWY-7963	Ilyop_0513
Ilyop_0513	PWY-7964	Ilyop_0513
Ilyop_0513	PWY-7965	Ilyop_0513
Ilyop_0513	PWY-7966	Ilyop_0513
Ilyop_0513	PWY-7967	Ilyop_0513
Ilyop_0513	PWY-7968	Ilyop_0513
Ilyop_0513	PWY-7969	Ilyop_0513
Ilyop_0513	PWY-7970	Ilyop_0513
Ilyop_0513	PWY-7975	Ilyop_0513
Ilyop_0514	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ilyop_0514	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ilyop_0514	PWY-7964	Ilyop_0514
Ilyop_0514	PWY-7965	Ilyop_0514
Ilyop_0514	PWY-7966	Ilyop_0514
Ilyop_0514	PWY-7967	Ilyop_0514
Ilyop_0514	PWY-7968	Ilyop_0514
Ilyop_0514	PWY-7969	Ilyop_0514
Ilyop_0514	PWY-7970	Ilyop_0514
Ilyop_0519	PWY-6938	NADH repair
Ilyop_0535	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ilyop_0535	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Ilyop_0541	PWY-1281	sulfoacetaldehyde degradation I
Ilyop_0541	PWY-5482	pyruvate fermentation to acetate II
Ilyop_0541	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_0541	PWY-5497	purine nucleobases degradation II (anaerobic)
Ilyop_0541	PWY-6637	sulfolactate degradation II
Ilyop_0542	PWY-5482	pyruvate fermentation to acetate II
Ilyop_0542	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_0542	PWY-5497	purine nucleobases degradation II (anaerobic)
Ilyop_0546	PWY-7158	L-phenylalanine degradation V
Ilyop_0547	PWY-5796	malonate decarboxylase activation
Ilyop_0553	PWY-5087	L-glutamate degradation VI (to pyruvate)
Ilyop_0553	PWY-5103	L-isoleucine biosynthesis III
Ilyop_0553	PWY-6728	methylaspartate cycle
Ilyop_0555	PWY-5087	L-glutamate degradation VI (to pyruvate)
Ilyop_0555	PWY-5103	L-isoleucine biosynthesis III
Ilyop_0555	PWY-6728	methylaspartate cycle
Ilyop_0556	PWY-5087	L-glutamate degradation VI (to pyruvate)
Ilyop_0556	PWY-6728	methylaspartate cycle
Ilyop_0559	PWY-6038	citrate degradation
Ilyop_0563	PWY-5958	acridone alkaloid biosynthesis
Ilyop_0563	PWY-6543	4-aminobenzoate biosynthesis
Ilyop_0563	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ilyop_0563	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ilyop_0564	PWY-5958	acridone alkaloid biosynthesis
Ilyop_0564	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ilyop_0564	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ilyop_0573	PWY-7805	Ilyop_0573
Ilyop_0573	PWY-7807	Ilyop_0573
Ilyop_0581	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Ilyop_0592	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Ilyop_0597	PWY-6936	seleno-amino acid biosynthesis
Ilyop_0598	PWY-6936	seleno-amino acid biosynthesis
Ilyop_0598	PWY-7274	D-cycloserine biosynthesis
Ilyop_0598	PWY-7870	Ilyop_0598
Ilyop_0615	PWY-7884	Ilyop_0615
Ilyop_0618	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Ilyop_0620	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_0620	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ilyop_0620	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_0620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_0620	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ilyop_0622	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ilyop_0622	PWY-7177	UTP and CTP dephosphorylation II
Ilyop_0622	PWY-7185	UTP and CTP dephosphorylation I
Ilyop_0636	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Ilyop_0636	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
Ilyop_0642	PWY-6936	seleno-amino acid biosynthesis
Ilyop_0656	PWY-3801	sucrose degradation II (sucrose synthase)
Ilyop_0656	PWY-6527	stachyose degradation
Ilyop_0656	PWY-7238	sucrose biosynthesis II
Ilyop_0656	PWY-7343	UDP-glucose biosynthesis
Ilyop_0656	PWY-7817	Ilyop_0656
Ilyop_0662	PWY-7884	Ilyop_0662
Ilyop_0665	PWY-2941	L-lysine biosynthesis II
Ilyop_0665	PWY-2942	L-lysine biosynthesis III
Ilyop_0665	PWY-5097	L-lysine biosynthesis VI
Ilyop_0665	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_0665	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ilyop_0665	PWY-6559	spermidine biosynthesis II
Ilyop_0665	PWY-6562	norspermidine biosynthesis
Ilyop_0665	PWY-7153	grixazone biosynthesis
Ilyop_0665	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_0665	PWY-7977	Ilyop_0665
Ilyop_0667	PWY-2941	L-lysine biosynthesis II
Ilyop_0667	PWY-2942	L-lysine biosynthesis III
Ilyop_0667	PWY-5097	L-lysine biosynthesis VI
Ilyop_0667	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ilyop_0667	PWY-6559	spermidine biosynthesis II
Ilyop_0667	PWY-6562	norspermidine biosynthesis
Ilyop_0667	PWY-7153	grixazone biosynthesis
Ilyop_0667	PWY-7977	Ilyop_0667
Ilyop_0676	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Ilyop_0676	PWY-2201	folate transformations I
Ilyop_0676	PWY-3841	folate transformations II
Ilyop_0676	PWY-5030	L-histidine degradation III
Ilyop_0676	PWY-5497	purine nucleobases degradation II (anaerobic)
Ilyop_0676	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Ilyop_0676	PWY-7909	Ilyop_0676
Ilyop_0679	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ilyop_0679	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ilyop_0679	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ilyop_0679	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_0679	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ilyop_0679	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ilyop_0679	PWY-7205	CMP phosphorylation
Ilyop_0679	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ilyop_0679	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_0679	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ilyop_0679	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_0679	PWY-7224	purine deoxyribonucleosides salvage
Ilyop_0679	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ilyop_0679	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ilyop_0686	PWY-6605	adenine and adenosine salvage II
Ilyop_0686	PWY-6610	adenine and adenosine salvage IV
Ilyop_0686	PWY-7805	Ilyop_0686
Ilyop_0686	PWY-7807	Ilyop_0686
Ilyop_0688	PWY-6700	queuosine biosynthesis
Ilyop_0694	PWY-5941	glycogen degradation II (eukaryotic)
Ilyop_0694	PWY-6731	starch degradation III
Ilyop_0694	PWY-6737	starch degradation V
Ilyop_0694	PWY-7238	sucrose biosynthesis II
Ilyop_0695	PWY-622	starch biosynthesis
Ilyop_0697	PWY-622	starch biosynthesis
Ilyop_0697	PWY-7902	Ilyop_0697
Ilyop_0698	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Ilyop_0698	PWY-622	starch biosynthesis
Ilyop_0698	PWY-7900	Ilyop_0698
Ilyop_0723	PWY-6610	adenine and adenosine salvage IV
Ilyop_0729	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_0729	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ilyop_0729	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ilyop_0729	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_0736	PWY-5482	pyruvate fermentation to acetate II
Ilyop_0736	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_0736	PWY-5497	purine nucleobases degradation II (anaerobic)
Ilyop_0747	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ilyop_0747	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ilyop_0747	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ilyop_0747	PWY-6113	superpathway of mycolate biosynthesis
Ilyop_0747	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ilyop_0747	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ilyop_0747	PWY-7663	gondoate biosynthesis (anaerobic)
Ilyop_0747	PWY-7664	oleate biosynthesis IV (anaerobic)
Ilyop_0747	PWY-7858	Ilyop_0747
Ilyop_0747	PWYG-321	mycolate biosynthesis
Ilyop_0749	PWY-3861	mannitol degradation II
Ilyop_0749	PWY-3881	mannitol biosynthesis
Ilyop_0749	PWY-5659	GDP-mannose biosynthesis
Ilyop_0749	PWY-6992	1,5-anhydrofructose degradation
Ilyop_0749	PWY-7456	mannan degradation
Ilyop_0749	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
Ilyop_0749	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Ilyop_0778	PWY-7942	Ilyop_0778
Ilyop_0784	PWY-5350	thiosulfate disproportionation III (rhodanese)
Ilyop_0784	PWY-7927	Ilyop_0784
Ilyop_0793	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Ilyop_0793	PWY-5743	3-hydroxypropanoate cycle
Ilyop_0793	PWY-5744	glyoxylate assimilation
Ilyop_0793	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ilyop_0793	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_0793	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ilyop_0793	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Ilyop_0796	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_0796	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ilyop_0796	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ilyop_0796	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_0801	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ilyop_0802	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Ilyop_0802	PWY-5739	GDP-D-perosamine biosynthesis
Ilyop_0802	PWY-5740	GDP-L-colitose biosynthesis
Ilyop_0802	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ilyop_0802	PWY-7573	GDP-mycosamine biosynthesis
Ilyop_0806	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Ilyop_0806	PWY-5940	streptomycin biosynthesis
Ilyop_0807	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Ilyop_0827	PWY-5532	adenosine nucleotides degradation IV
Ilyop_0827	PWY-7181	pyrimidine deoxyribonucleosides degradation
Ilyop_0832	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_0834	PWY-7799	Ilyop_0834
Ilyop_0834	PWY-7800	Ilyop_0834
Ilyop_0837	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Ilyop_0837	PWY-6153	autoinducer AI-2 biosynthesis I
Ilyop_0837	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Ilyop_0838	PWY-2161	folate polyglutamylation
Ilyop_0842	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ilyop_0842	PWY-6148	tetrahydromethanopterin biosynthesis
Ilyop_0842	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ilyop_0842	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ilyop_0843	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ilyop_0843	PWY-6148	tetrahydromethanopterin biosynthesis
Ilyop_0843	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ilyop_0843	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ilyop_0843	PWY-7852	Ilyop_0843
Ilyop_0843	PWY-7853	Ilyop_0843
Ilyop_0844	PWY-7805	Ilyop_0844
Ilyop_0844	PWY-7807	Ilyop_0844
Ilyop_0865	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Ilyop_0865	PWY-6167	flavin biosynthesis II (archaea)
Ilyop_0865	PWY-6168	flavin biosynthesis III (fungi)
Ilyop_0865	PWY-7863	Ilyop_0865
Ilyop_0920	PWY-6683	sulfate reduction III (assimilatory)
Ilyop_0942	PWY-2941	L-lysine biosynthesis II
Ilyop_0942	PWY-2942	L-lysine biosynthesis III
Ilyop_0942	PWY-5097	L-lysine biosynthesis VI
Ilyop_0942	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ilyop_0942	PWY-6559	spermidine biosynthesis II
Ilyop_0942	PWY-6562	norspermidine biosynthesis
Ilyop_0942	PWY-7153	grixazone biosynthesis
Ilyop_0942	PWY-7977	Ilyop_0942
Ilyop_0959	PWY-6700	queuosine biosynthesis
Ilyop_0981	PWY-5482	pyruvate fermentation to acetate II
Ilyop_0981	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_0981	PWY-5497	purine nucleobases degradation II (anaerobic)
Ilyop_0984	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ilyop_0984	PWY-6164	3-dehydroquinate biosynthesis I
Ilyop_0984	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Ilyop_1000	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_1000	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ilyop_1000	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_1000	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ilyop_1003	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Ilyop_1003	PWY-6549	L-glutamine biosynthesis III
Ilyop_1003	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ilyop_1003	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Ilyop_1075	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ilyop_1077	PWY-6349	CDP-archaeol biosynthesis
Ilyop_1081	PWY-5381	pyridine nucleotide cycling (plants)
Ilyop_1081	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Ilyop_1081	PWY-7761	Ilyop_1081
Ilyop_1104	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Ilyop_1105	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Ilyop_1114	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ilyop_1114	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ilyop_1114	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ilyop_1114	PWY-5994	palmitate biosynthesis I (animals and fungi)
Ilyop_1114	PWY-6113	superpathway of mycolate biosynthesis
Ilyop_1114	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ilyop_1114	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ilyop_1114	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ilyop_1114	PWY-7663	gondoate biosynthesis (anaerobic)
Ilyop_1114	PWY-7664	oleate biosynthesis IV (anaerobic)
Ilyop_1114	PWY-7858	Ilyop_1114
Ilyop_1114	PWYG-321	mycolate biosynthesis
Ilyop_1121	PWY-5669	phosphatidylethanolamine biosynthesis I
Ilyop_1125	PWY-6891	thiazole biosynthesis II (Bacillus)
Ilyop_1125	PWY-6892	thiazole biosynthesis I (E. coli)
Ilyop_1125	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1127	PWY-6823	molybdenum cofactor biosynthesis
Ilyop_1136	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ilyop_1136	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ilyop_1136	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ilyop_1136	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ilyop_1136	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_1136	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_1136	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ilyop_1136	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ilyop_1141	PWY-5155	&beta;-alanine biosynthesis III
Ilyop_1143	PWY-6654	phosphopantothenate biosynthesis III
Ilyop_1146	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_1146	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_1152	PWY-4041	&gamma;-glutamyl cycle
Ilyop_1152	PWY-7942	Ilyop_1152
Ilyop_1153	PWY-4041	&gamma;-glutamyl cycle
Ilyop_1153	PWY-7942	Ilyop_1153
Ilyop_1157	PWY-5103	L-isoleucine biosynthesis III
Ilyop_1157	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ilyop_1159	PWY-5101	L-isoleucine biosynthesis II
Ilyop_1159	PWY-5103	L-isoleucine biosynthesis III
Ilyop_1159	PWY-5104	L-isoleucine biosynthesis IV
Ilyop_1159	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ilyop_1159	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ilyop_1159	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ilyop_1159	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ilyop_1160	PWY-5101	L-isoleucine biosynthesis II
Ilyop_1160	PWY-5103	L-isoleucine biosynthesis III
Ilyop_1160	PWY-5104	L-isoleucine biosynthesis IV
Ilyop_1160	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ilyop_1161	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Ilyop_1164	PWY-6871	3-methylbutanol biosynthesis
Ilyop_1170	PWY-7851	Ilyop_1170
Ilyop_1178	PWY-6654	phosphopantothenate biosynthesis III
Ilyop_1181	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Ilyop_1183	PWY-6891	thiazole biosynthesis II (Bacillus)
Ilyop_1183	PWY-6892	thiazole biosynthesis I (E. coli)
Ilyop_1184	PWY-6892	thiazole biosynthesis I (E. coli)
Ilyop_1184	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ilyop_1186	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ilyop_1186	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ilyop_1186	PWY-6897	thiamin salvage II
Ilyop_1186	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Ilyop_1186	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Ilyop_1186	PWY-7356	thiamin salvage IV (yeast)
Ilyop_1186	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ilyop_1201	PWY-6164	3-dehydroquinate biosynthesis I
Ilyop_1203	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ilyop_1203	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Ilyop_1205	PWY-6834	spermidine biosynthesis III
Ilyop_1216	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ilyop_1224	PWY-6832	2-aminoethylphosphonate degradation II
Ilyop_1230	PWY-3162	L-tryptophan degradation V (side chain pathway)
Ilyop_1230	PWY-5057	L-valine degradation II
Ilyop_1230	PWY-5076	L-leucine degradation III
Ilyop_1230	PWY-5078	L-isoleucine degradation II
Ilyop_1230	PWY-5079	L-phenylalanine degradation III
Ilyop_1230	PWY-5082	L-methionine degradation III
Ilyop_1230	PWY-5480	pyruvate fermentation to ethanol I
Ilyop_1230	PWY-5486	pyruvate fermentation to ethanol II
Ilyop_1230	PWY-5751	phenylethanol biosynthesis
Ilyop_1230	PWY-6313	serotonin degradation
Ilyop_1230	PWY-6333	acetaldehyde biosynthesis I
Ilyop_1230	PWY-6342	noradrenaline and adrenaline degradation
Ilyop_1230	PWY-6587	pyruvate fermentation to ethanol III
Ilyop_1230	PWY-6802	salidroside biosynthesis
Ilyop_1230	PWY-6871	3-methylbutanol biosynthesis
Ilyop_1230	PWY-7013	L-1,2-propanediol degradation
Ilyop_1230	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ilyop_1230	PWY-7118	chitin degradation to ethanol
Ilyop_1230	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Ilyop_1254	PWY-6531	mannitol cycle
Ilyop_1255	PWY-6749	CMP-legionaminate biosynthesis I
Ilyop_1275	PWY-5667	CDP-diacylglycerol biosynthesis I
Ilyop_1275	PWY-5981	CDP-diacylglycerol biosynthesis III
Ilyop_1275	PWY-7902	Ilyop_1275
Ilyop_1283	PWY-5269	cardiolipin biosynthesis II
Ilyop_1283	PWY-5668	cardiolipin biosynthesis I
Ilyop_1283	PWY-7817	Ilyop_1283
Ilyop_1288	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ilyop_1288	PWY-6855	chitin degradation I (archaea)
Ilyop_1288	PWY-6906	chitin derivatives degradation
Ilyop_1292	PWY-7013	L-1,2-propanediol degradation
Ilyop_1293	PWY-7013	L-1,2-propanediol degradation
Ilyop_1300	PWY-6823	molybdenum cofactor biosynthesis
Ilyop_1301	PWY-6823	molybdenum cofactor biosynthesis
Ilyop_1302	PWY-6823	molybdenum cofactor biosynthesis
Ilyop_1303	PWY-6823	molybdenum cofactor biosynthesis
Ilyop_1316	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ilyop_1316	PWY-5723	Rubisco shunt
Ilyop_1319	PWY-6599	guanine and guanosine salvage II
Ilyop_1319	PWY-6609	adenine and adenosine salvage III
Ilyop_1319	PWY-6610	adenine and adenosine salvage IV
Ilyop_1319	PWY-6620	guanine and guanosine salvage
Ilyop_1320	PWY-6599	guanine and guanosine salvage II
Ilyop_1320	PWY-6609	adenine and adenosine salvage III
Ilyop_1320	PWY-6610	adenine and adenosine salvage IV
Ilyop_1320	PWY-6620	guanine and guanosine salvage
Ilyop_1326	PWY-6829	tRNA methylation (yeast)
Ilyop_1326	PWY-7285	methylwyosine biosynthesis
Ilyop_1326	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ilyop_1344	PWY-6898	thiamin salvage III
Ilyop_1344	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Ilyop_1344	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Ilyop_1344	PWY-7356	thiamin salvage IV (yeast)
Ilyop_1347	PWY-7039	phosphatidate metabolism, as a signaling molecule
Ilyop_1347	PWY-7817	Ilyop_1347
Ilyop_1352	PWY-2301	<i>myo</i>-inositol biosynthesis
Ilyop_1352	PWY-4702	phytate degradation I
Ilyop_1352	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Ilyop_1361	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_1364	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ilyop_1364	PWY-6416	quinate degradation II
Ilyop_1364	PWY-6707	gallate biosynthesis
Ilyop_1375	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ilyop_1377	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
Ilyop_1379	PWY-7205	CMP phosphorylation
Ilyop_1381	PWY-5381	pyridine nucleotide cycling (plants)
Ilyop_1381	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ilyop_1381	PWY-6596	adenosine nucleotides degradation I
Ilyop_1381	PWY-6606	guanosine nucleotides degradation II
Ilyop_1381	PWY-6607	guanosine nucleotides degradation I
Ilyop_1381	PWY-6608	guanosine nucleotides degradation III
Ilyop_1381	PWY-7185	UTP and CTP dephosphorylation I
Ilyop_1381	PWY-7821	Ilyop_1381
Ilyop_1387	PWY-2781	<i>cis</i>-zeatin biosynthesis
Ilyop_1399	PWY-3081	L-lysine biosynthesis V
Ilyop_1399	PWY-6871	3-methylbutanol biosynthesis
Ilyop_1399	PWY-7710	Ilyop_1399
Ilyop_1402	PWY-6823	molybdenum cofactor biosynthesis
Ilyop_1415	PWY-5941	glycogen degradation II (eukaryotic)
Ilyop_1415	PWY-6731	starch degradation III
Ilyop_1415	PWY-6737	starch degradation V
Ilyop_1415	PWY-7238	sucrose biosynthesis II
Ilyop_1416	PWY-5941	glycogen degradation II (eukaryotic)
Ilyop_1416	PWY-6724	starch degradation II
Ilyop_1416	PWY-6737	starch degradation V
Ilyop_1416	PWY-7238	sucrose biosynthesis II
Ilyop_1417	PWY-7183	pyrimidine nucleobases salvage I
Ilyop_1430	PWY-3961	phosphopantothenate biosynthesis II
Ilyop_1441	PWY-6700	queuosine biosynthesis
Ilyop_1453	PWY-7980	Ilyop_1453
Ilyop_1459	PWY-6556	pyrimidine ribonucleosides salvage II
Ilyop_1459	PWY-7181	pyrimidine deoxyribonucleosides degradation
Ilyop_1459	PWY-7193	pyrimidine ribonucleosides salvage I
Ilyop_1459	PWY-7199	pyrimidine deoxyribonucleosides salvage
Ilyop_1460	PWY-4202	arsenate detoxification I (glutaredoxin)
Ilyop_1460	PWY-5532	adenosine nucleotides degradation IV
Ilyop_1460	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ilyop_1460	PWY-6608	guanosine nucleotides degradation III
Ilyop_1460	PWY-6609	adenine and adenosine salvage III
Ilyop_1460	PWY-6611	adenine and adenosine salvage V
Ilyop_1460	PWY-6620	guanine and guanosine salvage
Ilyop_1460	PWY-6627	salinosporamide A biosynthesis
Ilyop_1460	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Ilyop_1460	PWY-7179	purine deoxyribonucleosides degradation I
Ilyop_1460	PWY-7179-1	purine deoxyribonucleosides degradation
Ilyop_1461	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Ilyop_1462	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Ilyop_1463	PWY-7181	pyrimidine deoxyribonucleosides degradation
Ilyop_1465	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ilyop_1465	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Ilyop_1465	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Ilyop_1479	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Ilyop_1479	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ilyop_1479	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Ilyop_1484	PWY-6891	thiazole biosynthesis II (Bacillus)
Ilyop_1484	PWY-6892	thiazole biosynthesis I (E. coli)
Ilyop_1484	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1503	PWY-7851	Ilyop_1503
Ilyop_1509	PWY-5367	petroselinate biosynthesis
Ilyop_1509	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ilyop_1509	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ilyop_1509	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ilyop_1509	PWY-5994	palmitate biosynthesis I (animals and fungi)
Ilyop_1509	PWY-6113	superpathway of mycolate biosynthesis
Ilyop_1509	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ilyop_1509	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ilyop_1509	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ilyop_1509	PWY-7663	gondoate biosynthesis (anaerobic)
Ilyop_1509	PWY-7664	oleate biosynthesis IV (anaerobic)
Ilyop_1509	PWY-7858	Ilyop_1509
Ilyop_1509	PWYG-321	mycolate biosynthesis
Ilyop_1510	PWY-4381	fatty acid biosynthesis initiation I
Ilyop_1510	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Ilyop_1510	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ilyop_1511	PWY-4381	fatty acid biosynthesis initiation I
Ilyop_1516	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_1516	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ilyop_1516	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_1516	PWY-5723	Rubisco shunt
Ilyop_1516	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_1516	PWY-6886	1-butanol autotrophic biosynthesis
Ilyop_1516	PWY-6901	superpathway of glucose and xylose degradation
Ilyop_1516	PWY-7003	glycerol degradation to butanol
Ilyop_1516	PWY-7124	ethylene biosynthesis V (engineered)
Ilyop_1516	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ilyop_1517	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_1517	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_1517	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_1517	PWY-7003	glycerol degradation to butanol
Ilyop_1533	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ilyop_1543	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ilyop_1543	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Ilyop_1552	PWY-7199	pyrimidine deoxyribonucleosides salvage
Ilyop_1552	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ilyop_1571	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ilyop_1571	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Ilyop_1573	PWY-7352	daunorubicin biosynthesis
Ilyop_1573	PWY-7354	aclacinomycin biosynthesis
Ilyop_1681	PWY-3821	galactose degradation III
Ilyop_1681	PWY-6317	galactose degradation I (Leloir pathway)
Ilyop_1681	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Ilyop_1681	PWY-6527	stachyose degradation
Ilyop_1681	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Ilyop_1681	PWY-7344	UDP-D-galactose biosynthesis
Ilyop_1691	PWY-5057	L-valine degradation II
Ilyop_1691	PWY-5076	L-leucine degradation III
Ilyop_1691	PWY-5078	L-isoleucine degradation II
Ilyop_1691	PWY-5101	L-isoleucine biosynthesis II
Ilyop_1691	PWY-5103	L-isoleucine biosynthesis III
Ilyop_1691	PWY-5104	L-isoleucine biosynthesis IV
Ilyop_1691	PWY-5108	L-isoleucine biosynthesis V
Ilyop_1691	PWY-7767	Ilyop_1691
Ilyop_1709	PWY-6614	tetrahydrofolate biosynthesis
Ilyop_1716	PWY-6891	thiazole biosynthesis II (Bacillus)
Ilyop_1716	PWY-6892	thiazole biosynthesis I (E. coli)
Ilyop_1716	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1720	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_1720	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_1735	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1741	PWY-4261	glycerol degradation I
Ilyop_1747	PWY-4261	glycerol degradation I
Ilyop_1750	PWY-101	photosynthesis light reactions
Ilyop_1751	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_1751	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_1753	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Ilyop_1759	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_1759	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ilyop_1759	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_1759	PWY-5723	Rubisco shunt
Ilyop_1759	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_1759	PWY-6886	1-butanol autotrophic biosynthesis
Ilyop_1759	PWY-6901	superpathway of glucose and xylose degradation
Ilyop_1759	PWY-7003	glycerol degradation to butanol
Ilyop_1759	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ilyop_1759	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ilyop_1760	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_1760	PWY-1622	formaldehyde assimilation I (serine pathway)
Ilyop_1760	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ilyop_1760	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_1760	PWY-5723	Rubisco shunt
Ilyop_1760	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_1760	PWY-6886	1-butanol autotrophic biosynthesis
Ilyop_1760	PWY-6901	superpathway of glucose and xylose degradation
Ilyop_1760	PWY-7003	glycerol degradation to butanol
Ilyop_1760	PWY-7124	ethylene biosynthesis V (engineered)
Ilyop_1760	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ilyop_1771	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ilyop_1771	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ilyop_1771	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_1771	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ilyop_1771	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ilyop_1771	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ilyop_1772	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1773	PWY-5667	CDP-diacylglycerol biosynthesis I
Ilyop_1773	PWY-5981	CDP-diacylglycerol biosynthesis III
Ilyop_1773	PWY-7817	Ilyop_1773
Ilyop_1788	PWY-7799	Ilyop_1788
Ilyop_1788	PWY-7800	Ilyop_1788
Ilyop_1789	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ilyop_1818	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1844	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1852	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_1852	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_1852	PWY-7953	Ilyop_1852
Ilyop_1853	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_1853	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_1853	PWY-7953	Ilyop_1853
Ilyop_1854	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_1854	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_1854	PWY-7953	Ilyop_1854
Ilyop_1855	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_1855	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ilyop_1855	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ilyop_1855	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_1856	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_1856	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_1857	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_1857	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ilyop_1857	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_1858	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_1858	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_1858	PWY-7953	Ilyop_1858
Ilyop_1867	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ilyop_1868	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ilyop_1890	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Ilyop_1890	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Ilyop_1891	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Ilyop_1891	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Ilyop_1895	PWY-3801	sucrose degradation II (sucrose synthase)
Ilyop_1895	PWY-5054	sorbitol biosynthesis I
Ilyop_1895	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Ilyop_1895	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ilyop_1895	PWY-5659	GDP-mannose biosynthesis
Ilyop_1895	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_1895	PWY-621	sucrose degradation III (sucrose invertase)
Ilyop_1895	PWY-622	starch biosynthesis
Ilyop_1895	PWY-6981	chitin biosynthesis
Ilyop_1895	PWY-6992	1,5-anhydrofructose degradation
Ilyop_1895	PWY-7238	sucrose biosynthesis II
Ilyop_1895	PWY-7347	sucrose biosynthesis III
Ilyop_1895	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ilyop_1898	PWY-7560	methylerythritol phosphate pathway II
Ilyop_1914	PWY-7193	pyrimidine ribonucleosides salvage I
Ilyop_1919	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ilyop_2000	PWY-1042	glycolysis IV (plant cytosol)
Ilyop_2000	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ilyop_2000	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ilyop_2000	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ilyop_2007	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_2007	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ilyop_2007	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ilyop_2007	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_2019	PWY-6167	flavin biosynthesis II (archaea)
Ilyop_2019	PWY-6168	flavin biosynthesis III (fungi)
Ilyop_2020	PWY-7991	Ilyop_2020
Ilyop_2021	PWY-6167	flavin biosynthesis II (archaea)
Ilyop_2021	PWY-6168	flavin biosynthesis III (fungi)
Ilyop_2021	PWY-7980	Ilyop_2021
Ilyop_2022	PWY-6167	flavin biosynthesis II (archaea)
Ilyop_2022	PWY-6168	flavin biosynthesis III (fungi)
Ilyop_2022	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ilyop_2022	PWY-7991	Ilyop_2022
Ilyop_2093	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_2093	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_2125	PWY-5530	sorbitol biosynthesis II
Ilyop_2127	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Ilyop_2132	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Ilyop_2132	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
Ilyop_2136	PWY-6986	alginate degradation
Ilyop_2162	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ilyop_2162	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Ilyop_2162	PWY-7242	D-fructuronate degradation
Ilyop_2162	PWY-7310	D-glucosaminate degradation
Ilyop_2162	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
Ilyop_2179	PWY-5480	pyruvate fermentation to ethanol I
Ilyop_2179	PWY-5485	pyruvate fermentation to acetate IV
Ilyop_2179	PWY-5493	reductive monocarboxylic acid cycle
Ilyop_2196	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ilyop_2196	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ilyop_2196	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ilyop_2197	PWY-6123	inosine-5'-phosphate biosynthesis I
Ilyop_2197	PWY-6124	inosine-5'-phosphate biosynthesis II
Ilyop_2197	PWY-7234	inosine-5'-phosphate biosynthesis III
Ilyop_2198	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ilyop_2198	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Ilyop_2199	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ilyop_2199	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ilyop_2199	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ilyop_2200	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ilyop_2200	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ilyop_2200	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ilyop_2200	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ilyop_2201	PWY-6123	inosine-5'-phosphate biosynthesis I
Ilyop_2201	PWY-6124	inosine-5'-phosphate biosynthesis II
Ilyop_2201	PWY-7234	inosine-5'-phosphate biosynthesis III
Ilyop_2203	PWY-6123	inosine-5'-phosphate biosynthesis I
Ilyop_2203	PWY-7234	inosine-5'-phosphate biosynthesis III
Ilyop_2205	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Ilyop_2205	PWY-2161	folate polyglutamylation
Ilyop_2205	PWY-2201	folate transformations I
Ilyop_2205	PWY-3841	folate transformations II
Ilyop_2207	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2207	PWY-5686	UMP biosynthesis
Ilyop_2207	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2207	PWY-7790	Ilyop_2207
Ilyop_2207	PWY-7791	Ilyop_2207
Ilyop_2208	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2208	PWY-5686	UMP biosynthesis
Ilyop_2208	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2208	PWY-7790	Ilyop_2208
Ilyop_2208	PWY-7791	Ilyop_2208
Ilyop_2216	PWY-6683	sulfate reduction III (assimilatory)
Ilyop_2225	PWY-101	photosynthesis light reactions
Ilyop_2228	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Ilyop_2228	PWY-6153	autoinducer AI-2 biosynthesis I
Ilyop_2228	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Ilyop_2242	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Ilyop_2242	PWY-7820	Ilyop_2242
Ilyop_2253	PWY-723	alkylnitronates degradation
Ilyop_2254	PWY-723	alkylnitronates degradation
Ilyop_2260	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ilyop_2266	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Ilyop_2266	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ilyop_2275	PWY-6703	preQ<sub>0</sub> biosynthesis
Ilyop_2276	PWY-5663	tetrahydrobiopterin biosynthesis I
Ilyop_2276	PWY-5664	tetrahydrobiopterin biosynthesis II
Ilyop_2276	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ilyop_2276	PWY-6703	preQ<sub>0</sub> biosynthesis
Ilyop_2276	PWY-6983	tetrahydrobiopterin biosynthesis III
Ilyop_2276	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Ilyop_2276	PWY-7852	Ilyop_2276
Ilyop_2277	PWY-6703	preQ<sub>0</sub> biosynthesis
Ilyop_2303	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Ilyop_2316	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ilyop_2316	PWY-6808	dTDP-D-forosamine biosynthesis
Ilyop_2316	PWY-6942	dTDP-D-desosamine biosynthesis
Ilyop_2316	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ilyop_2316	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ilyop_2316	PWY-6974	dTDP-L-olivose biosynthesis
Ilyop_2316	PWY-6976	dTDP-L-mycarose biosynthesis
Ilyop_2316	PWY-7104	dTDP-L-megosamine biosynthesis
Ilyop_2316	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ilyop_2316	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ilyop_2316	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ilyop_2316	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ilyop_2316	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ilyop_2316	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ilyop_2316	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ilyop_2316	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ilyop_2316	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Ilyop_2316	PWY-7688	Ilyop_2316
Ilyop_2316	PWY-7814	Ilyop_2316
Ilyop_2323	PWY-5316	nicotine biosynthesis
Ilyop_2323	PWY-5381	pyridine nucleotide cycling (plants)
Ilyop_2323	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Ilyop_2323	PWY-7342	superpathway of nicotine biosynthesis
Ilyop_2325	PWY-5316	nicotine biosynthesis
Ilyop_2325	PWY-7342	superpathway of nicotine biosynthesis
Ilyop_2348	PWY-7013	L-1,2-propanediol degradation
Ilyop_2349	PWY-7013	L-1,2-propanediol degradation
Ilyop_2354	PWY-5437	L-threonine degradation I
Ilyop_2354	PWY-7013	L-1,2-propanediol degradation
Ilyop_2365	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2367	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2369	PWY-5194	siroheme biosynthesis
Ilyop_2369	PWY-5196	factor 430 biosynthesis
Ilyop_2369	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2370	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2371	PWY-5194	siroheme biosynthesis
Ilyop_2371	PWY-5196	factor 430 biosynthesis
Ilyop_2371	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2375	PWY-5443	aminopropanol phosphate biosynthesis I
Ilyop_2376	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ilyop_2377	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ilyop_2377	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ilyop_2378	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ilyop_2378	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ilyop_2378	PWY-5194	siroheme biosynthesis
Ilyop_2378	PWY-5196	factor 430 biosynthesis
Ilyop_2378	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2379	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ilyop_2379	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ilyop_2380	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ilyop_2383	PWY-6840	homoglutathione biosynthesis
Ilyop_2383	PWY-7255	ergothioneine biosynthesis I (bacteria)
Ilyop_2385	PWY-5194	siroheme biosynthesis
Ilyop_2385	PWY-5196	factor 430 biosynthesis
Ilyop_2385	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2405	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ilyop_2405	PWY-6164	3-dehydroquinate biosynthesis I
Ilyop_2405	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Ilyop_2406	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Ilyop_2407	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ilyop_2408	PWY-3461	L-tyrosine biosynthesis II
Ilyop_2408	PWY-3462	L-phenylalanine biosynthesis II
Ilyop_2408	PWY-6120	L-tyrosine biosynthesis III
Ilyop_2408	PWY-6627	salinosporamide A biosynthesis
Ilyop_2408	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Ilyop_2408	PWY-7626	bacilysin biosynthesis
Ilyop_2410	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ilyop_2411	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ilyop_2412	PWY-5958	acridone alkaloid biosynthesis
Ilyop_2412	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ilyop_2412	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ilyop_2413	PWY-5958	acridone alkaloid biosynthesis
Ilyop_2413	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ilyop_2413	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ilyop_2424	PWY-2201	folate transformations I
Ilyop_2424	PWY-3841	folate transformations II
Ilyop_2426	PWY-2941	L-lysine biosynthesis II
Ilyop_2426	PWY-2942	L-lysine biosynthesis III
Ilyop_2426	PWY-5097	L-lysine biosynthesis VI
Ilyop_2426	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ilyop_2426	PWY-6559	spermidine biosynthesis II
Ilyop_2426	PWY-6562	norspermidine biosynthesis
Ilyop_2426	PWY-7153	grixazone biosynthesis
Ilyop_2426	PWY-7977	Ilyop_2426
Ilyop_2427	PWY-2201	folate transformations I
Ilyop_2427	PWY-3841	folate transformations II
Ilyop_2427	PWY-7977	Ilyop_2427
Ilyop_2468	PWY-7425	2-chloroacrylate degradation I
Ilyop_2477	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Ilyop_2477	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Ilyop_2477	PWY-7717	Ilyop_2477
Ilyop_2477	PWY-7733	Ilyop_2477
Ilyop_2477	PWY-7734	Ilyop_2477
Ilyop_2477	PWY-7765	Ilyop_2477
Ilyop_2483	PWY-5101	L-isoleucine biosynthesis II
Ilyop_2483	PWY-5103	L-isoleucine biosynthesis III
Ilyop_2483	PWY-5104	L-isoleucine biosynthesis IV
Ilyop_2483	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ilyop_2483	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ilyop_2483	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ilyop_2483	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ilyop_2484	PWY-5101	L-isoleucine biosynthesis II
Ilyop_2484	PWY-5103	L-isoleucine biosynthesis III
Ilyop_2484	PWY-5104	L-isoleucine biosynthesis IV
Ilyop_2484	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ilyop_2484	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ilyop_2484	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ilyop_2484	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ilyop_2485	PWY-5686	UMP biosynthesis
Ilyop_2485	PWY-7790	Ilyop_2485
Ilyop_2485	PWY-7791	Ilyop_2485
Ilyop_2486	PWY-5686	UMP biosynthesis
Ilyop_2486	PWY-7790	Ilyop_2486
Ilyop_2486	PWY-7791	Ilyop_2486
Ilyop_2487	PWY-5686	UMP biosynthesis
Ilyop_2487	PWY-7790	Ilyop_2487
Ilyop_2487	PWY-7791	Ilyop_2487
Ilyop_2491	PWY-5686	UMP biosynthesis
Ilyop_2491	PWY-7790	Ilyop_2491
Ilyop_2491	PWY-7791	Ilyop_2491
Ilyop_2494	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ilyop_2494	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ilyop_2503	PWY-5750	itaconate biosynthesis
Ilyop_2503	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ilyop_2503	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Ilyop_2515	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ilyop_2515	PWY-5723	Rubisco shunt
Ilyop_2528	PWY-381	nitrate reduction II (assimilatory)
Ilyop_2528	PWY-5675	nitrate reduction V (assimilatory)
Ilyop_2528	PWY-6549	L-glutamine biosynthesis III
Ilyop_2528	PWY-6963	ammonia assimilation cycle I
Ilyop_2528	PWY-6964	ammonia assimilation cycle II
Ilyop_2540	PWY-3341	L-proline biosynthesis III
Ilyop_2540	PWY-4981	L-proline biosynthesis II (from arginine)
Ilyop_2540	PWY-6344	L-ornithine degradation II (Stickland reaction)
Ilyop_2567	PWY-5392	reductive TCA cycle II
Ilyop_2567	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ilyop_2567	PWY-5690	TCA cycle II (plants and fungi)
Ilyop_2567	PWY-5913	TCA cycle VI (obligate autotrophs)
Ilyop_2567	PWY-6728	methylaspartate cycle
Ilyop_2567	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ilyop_2567	PWY-7254	TCA cycle VII (acetate-producers)
Ilyop_2567	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ilyop_2571	PWY-5350	thiosulfate disproportionation III (rhodanese)
Ilyop_2571	PWY-7927	Ilyop_2571
Ilyop_2587	PWY-4981	L-proline biosynthesis II (from arginine)
Ilyop_2587	PWY-4984	urea cycle
Ilyop_2587	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2589	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2589	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2590	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2590	PWY-5686	UMP biosynthesis
Ilyop_2590	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2590	PWY-7790	Ilyop_2590
Ilyop_2590	PWY-7791	Ilyop_2590
Ilyop_2591	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2591	PWY-5686	UMP biosynthesis
Ilyop_2591	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2591	PWY-7790	Ilyop_2591
Ilyop_2591	PWY-7791	Ilyop_2591
Ilyop_2592	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2593	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2593	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2621	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2622	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ilyop_2633	PWY-5350	thiosulfate disproportionation III (rhodanese)
Ilyop_2633	PWY-7927	Ilyop_2633
Ilyop_2656	PWY-5350	thiosulfate disproportionation III (rhodanese)
Ilyop_2656	PWY-7927	Ilyop_2656
Ilyop_2663	PWY-6019	pseudouridine degradation
Ilyop_2665	PWY-2941	L-lysine biosynthesis II
Ilyop_2666	PWY-2941	L-lysine biosynthesis II
Ilyop_2666	PWY-2942	L-lysine biosynthesis III
Ilyop_2666	PWY-5097	L-lysine biosynthesis VI
Ilyop_2667	PWY-2941	L-lysine biosynthesis II
Ilyop_2667	PWY-2942	L-lysine biosynthesis III
Ilyop_2667	PWY-5097	L-lysine biosynthesis VI
Ilyop_2668	PWY-2941	L-lysine biosynthesis II
Ilyop_2668	PWY-2942	L-lysine biosynthesis III
Ilyop_2668	PWY-5097	L-lysine biosynthesis VI
Ilyop_2668	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ilyop_2668	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ilyop_2668	PWY-6559	spermidine biosynthesis II
Ilyop_2668	PWY-6562	norspermidine biosynthesis
Ilyop_2668	PWY-7153	grixazone biosynthesis
Ilyop_2668	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ilyop_2668	PWY-7977	Ilyop_2668
Ilyop_2669	PWY-2941	L-lysine biosynthesis II
Ilyop_2669	PWY-5097	L-lysine biosynthesis VI
Ilyop_2670	PWY-2941	L-lysine biosynthesis II
Ilyop_2670	PWY-2942	L-lysine biosynthesis III
Ilyop_2670	PWY-5097	L-lysine biosynthesis VI
Ilyop_2670	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ilyop_2670	PWY-6559	spermidine biosynthesis II
Ilyop_2670	PWY-6562	norspermidine biosynthesis
Ilyop_2670	PWY-7153	grixazone biosynthesis
Ilyop_2670	PWY-7977	Ilyop_2670
Ilyop_2671	PWY-2941	L-lysine biosynthesis II
Ilyop_2671	PWY-2942	L-lysine biosynthesis III
Ilyop_2671	PWY-5097	L-lysine biosynthesis VI
Ilyop_2674	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Ilyop_2678	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ilyop_2687	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ilyop_2688	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ilyop_2688	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ilyop_2688	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ilyop_2688	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ilyop_2689	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Ilyop_2689	PWY-5739	GDP-D-perosamine biosynthesis
Ilyop_2689	PWY-5740	GDP-L-colitose biosynthesis
Ilyop_2689	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ilyop_2689	PWY-7573	GDP-mycosamine biosynthesis
Ilyop_2721	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ilyop_2722	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ilyop_2726	PWY-4381	fatty acid biosynthesis initiation I
Ilyop_2726	PWY-5743	3-hydroxypropanoate cycle
Ilyop_2726	PWY-5744	glyoxylate assimilation
Ilyop_2726	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ilyop_2726	PWY-6722	candicidin biosynthesis
Ilyop_2727	PWY-5741	ethylmalonyl-CoA pathway
Ilyop_2727	PWY-5743	3-hydroxypropanoate cycle
Ilyop_2727	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ilyop_2727	PWY-6728	methylaspartate cycle
Ilyop_2727	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ilyop_2727	PWY-7854	Ilyop_2727
Ilyop_2738	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_2738	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_2738	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ilyop_2750	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ilyop_2750	PWY-6808	dTDP-D-forosamine biosynthesis
Ilyop_2750	PWY-6942	dTDP-D-desosamine biosynthesis
Ilyop_2750	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ilyop_2750	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ilyop_2750	PWY-6974	dTDP-L-olivose biosynthesis
Ilyop_2750	PWY-6976	dTDP-L-mycarose biosynthesis
Ilyop_2750	PWY-7104	dTDP-L-megosamine biosynthesis
Ilyop_2750	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ilyop_2750	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ilyop_2750	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ilyop_2750	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ilyop_2750	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ilyop_2750	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ilyop_2750	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ilyop_2750	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ilyop_2750	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
Ilyop_2750	PWY-7688	Ilyop_2750
Ilyop_2750	PWY-7814	Ilyop_2750
Ilyop_2765	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Ilyop_2765	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ilyop_2771	PWY-5350	thiosulfate disproportionation III (rhodanese)
Ilyop_2771	PWY-7927	Ilyop_2771
Ilyop_2773	PWY-5350	thiosulfate disproportionation III (rhodanese)
Ilyop_2773	PWY-7927	Ilyop_2773
Ilyop_2776	PWY-6609	adenine and adenosine salvage III
Ilyop_2776	PWY-6611	adenine and adenosine salvage V
Ilyop_2776	PWY-7179	purine deoxyribonucleosides degradation I
Ilyop_2776	PWY-7179-1	purine deoxyribonucleosides degradation
Ilyop_2779	PWY-3821	galactose degradation III
Ilyop_2779	PWY-6317	galactose degradation I (Leloir pathway)
Ilyop_2779	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Ilyop_2779	PWY-6527	stachyose degradation
Ilyop_2779	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Ilyop_2779	PWY-7344	UDP-D-galactose biosynthesis
Ilyop_2782	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ilyop_2782	PWY-6596	adenosine nucleotides degradation I
Ilyop_2782	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ilyop_2785	PWY-6854	ethylene biosynthesis III (microbes)
Ilyop_2786	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ilyop_2786	PWY-6855	chitin degradation I (archaea)
Ilyop_2786	PWY-6906	chitin derivatives degradation
Ilyop_2787	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ilyop_2791	PWY-7887	Ilyop_2791
Ilyop_2791	PWY-7892	Ilyop_2791
Ilyop_2793	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Ilyop_2797	PWY-5669	phosphatidylethanolamine biosynthesis I
Ilyop_2800	PWY-5381	pyridine nucleotide cycling (plants)
Ilyop_2844	PWY-5340	sulfate activation for sulfonation
Ilyop_2847	PWY-5278	sulfite oxidation III
Ilyop_2847	PWY-5340	sulfate activation for sulfonation
Ilyop_2847	PWY-6683	sulfate reduction III (assimilatory)
Ilyop_2847	PWY-6932	selenate reduction
Ilyop_2848	PWY-5278	sulfite oxidation III
Ilyop_2848	PWY-5340	sulfate activation for sulfonation
Ilyop_2848	PWY-6683	sulfate reduction III (assimilatory)
Ilyop_2848	PWY-6932	selenate reduction
Ilyop_2920	PWY-4261	glycerol degradation I
Ilyop_2926	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
