Ilyop_0006 SM00387 Histidine kinase-like ATPases Ilyop_0006 SM00433 TopoisomeraseII Ilyop_0007 SM00434 DNA Topoisomerase IV Ilyop_0012 SM00873 B3/4 domain Ilyop_0012 SM00874 tRNA synthetase B5 domain Ilyop_0012 SM00896 Ferredoxin-fold anticodon binding domain Ilyop_0020 SM00900 Ilyop_0020 Ilyop_0033 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ilyop_0035 SM00257 Lysin motif Ilyop_0048 SM00382 ATPases associated with a variety of cellular activities Ilyop_0066 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_0073 SM00858 Ilyop_0073 Ilyop_0078 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0078 SM00895 Ilyop_0078 Ilyop_0084 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0084 SM00895 Ilyop_0084 Ilyop_0102 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0102 SM00895 Ilyop_0102 Ilyop_0108 SM00382 ATPases associated with a variety of cellular activities Ilyop_0109 SM00327 von Willebrand factor (vWF) type A domain Ilyop_0110 SM00354 helix_turn _helix lactose operon repressor Ilyop_0113 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_0123 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_0131 SM01092 CO dehydrogenase flavoprotein C-terminal domain Ilyop_0133 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_0136 SM00382 ATPases associated with a variety of cellular activities Ilyop_0149 SM00382 ATPases associated with a variety of cellular activities Ilyop_0151 SM00563 Phosphate acyltransferases Ilyop_0167 SM00967 RNA 2'-O ribose methyltransferase substrate binding Ilyop_0170 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Ilyop_0174 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Ilyop_0175 SM00649 Ribosomal protein L11/L12 Ilyop_0180 SM00663 RNA polymerase I subunit A N-terminus Ilyop_0183 SM00072 Guanylate kinase homologues. Ilyop_0184 SM01409 Ilyop_0184 Ilyop_0187 SM00400 zinc finger Ilyop_0187 SM00493 Ilyop_0187 Ilyop_0196 SM00998 Adenylosuccinate lyase C-terminus Ilyop_0207 SM00382 ATPases associated with a variety of cellular activities Ilyop_0212 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ilyop_0212 SM00091 PAS domain Ilyop_0212 SM00267 diguanylate cyclase Ilyop_0216 SM00852 Probable molybdopterin binding domain Ilyop_0217 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_0219 SM01120 Ilyop_0219 Ilyop_0219 SM01121 Ilyop_0219 Ilyop_0220 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_0225 SM01329 Ilyop_0225 Ilyop_0227 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0227 SM00895 Ilyop_0227 Ilyop_0228 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_0228 SM00876 Biotin and Thiamin Synthesis associated domain Ilyop_0231 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_0233 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_0233 SM01131 Ilyop_0233 Ilyop_0239 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Ilyop_0239 SM00532 Ligase N family Ilyop_0241 SM00957 SecA DEAD-like domain Ilyop_0241 SM00958 SecA preprotein cross-linking domain Ilyop_0244 SM00481 DNA polymerase alpha chain like domain Ilyop_0248 SM00382 ATPases associated with a variety of cellular activities Ilyop_0250 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_0258 SM00382 ATPases associated with a variety of cellular activities Ilyop_0259 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_0268 SM00448 cheY-homologous receiver domain Ilyop_0268 SM00862 Transcriptional regulatory protein, C terminal Ilyop_0269 SM00387 Histidine kinase-like ATPases Ilyop_0269 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_0269 SM00448 cheY-homologous receiver domain Ilyop_0272 SM00882 Coenzyme A transferase Ilyop_0274 SM00822 Ilyop_0274 Ilyop_0279 SM00893 Electron transfer flavoprotein domain Ilyop_0280 SM00893 Electron transfer flavoprotein domain Ilyop_0281 SM00387 Histidine kinase-like ATPases Ilyop_0281 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_0281 SM00448 cheY-homologous receiver domain Ilyop_0282 SM00448 cheY-homologous receiver domain Ilyop_0282 SM00862 Transcriptional regulatory protein, C terminal Ilyop_0289 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0306 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_0308 SM00899 Ilyop_0308 Ilyop_0320 SM00387 Histidine kinase-like ATPases Ilyop_0320 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_0321 SM00448 cheY-homologous receiver domain Ilyop_0325 SM00354 helix_turn _helix lactose operon repressor Ilyop_0328 SM00382 ATPases associated with a variety of cellular activities Ilyop_0336 SM00382 ATPases associated with a variety of cellular activities Ilyop_0337 SM00062 Bacterial periplasmic substrate-binding proteins Ilyop_0338 SM00062 Bacterial periplasmic substrate-binding proteins Ilyop_0338 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Ilyop_0352 SM00448 cheY-homologous receiver domain Ilyop_0353 SM00829 Enoylreductase Ilyop_0354 SM00052 Putative diguanylate phosphodiesterase Ilyop_0354 SM00267 diguanylate cyclase Ilyop_0357 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Ilyop_0357 SM00534 ATPase domain of DNA mismatch repair MUTS family Ilyop_0360 SM00382 ATPases associated with a variety of cellular activities Ilyop_0361 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Ilyop_0362 SM00732 Likely ribonuclease with RNase H fold. Ilyop_0365 SM01005 Alanine racemase, C-terminal domain Ilyop_0366 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Ilyop_0373 SM00363 S4 RNA-binding domain Ilyop_0397 SM00984 UDP binding domain Ilyop_0406 SM00493 Ilyop_0406 Ilyop_0407 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Ilyop_0407 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Ilyop_0411 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Ilyop_0413 SM00670 Large family of predicted nucleotide-binding domains Ilyop_0417 SM00382 ATPases associated with a variety of cellular activities Ilyop_0418 SM00382 ATPases associated with a variety of cellular activities Ilyop_0420 SM00382 ATPases associated with a variety of cellular activities Ilyop_0423 SM00836 DALR anticodon binding domain Ilyop_0423 SM01016 Arginyl tRNA synthetase N terminal dom Ilyop_0425 SM00465 GIY-YIG type nucleases (URI domain) Ilyop_0426 SM00448 cheY-homologous receiver domain Ilyop_0428 SM00331 Sigma factor PP2C-like phosphatases Ilyop_0431 SM00382 ATPases associated with a variety of cellular activities Ilyop_0435 SM00062 Bacterial periplasmic substrate-binding proteins Ilyop_0435 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Ilyop_0438 SM00267 diguanylate cyclase Ilyop_0446 SM00248 ankyrin repeats Ilyop_0447 SM01120 Ilyop_0447 Ilyop_0449 SM01133 Ilyop_0449 Ilyop_0456 SM00849 Metallo-beta-lactamase superfamily Ilyop_0457 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ilyop_0461 SM00387 Histidine kinase-like ATPases Ilyop_0461 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_0473 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0473 SM00866 Ilyop_0473 Ilyop_0479 SM00518 AP endonuclease family 2 Ilyop_0481 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_0481 SM00876 Biotin and Thiamin Synthesis associated domain Ilyop_0487 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_0494 SM00028 Tetratricopeptide repeats Ilyop_0495 SM00853 MutL C terminal dimerisation domain Ilyop_0495 SM01340 Ilyop_0495 Ilyop_0501 SM00267 diguanylate cyclase Ilyop_0503 SM00642 Alpha-amylase domain Ilyop_0509 SM00382 ATPases associated with a variety of cellular activities Ilyop_0513 SM00855 Phosphoglycerate mutase family Ilyop_0518 SM00248 ankyrin repeats Ilyop_0520 SM00487 DEAD-like helicases superfamily Ilyop_0520 SM00490 helicase superfamily c-terminal domain Ilyop_0523 SM00028 Tetratricopeptide repeats Ilyop_0525 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Ilyop_0525 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Ilyop_0525 SM00493 Ilyop_0525 Ilyop_0537 SM00900 Ilyop_0537 Ilyop_0540 SM00382 ATPases associated with a variety of cellular activities Ilyop_0540 SM00962 SRP54-type protein, GTPase domain Ilyop_0540 SM00963 SRP54-type protein, helical bundle domain Ilyop_0543 SM00890 Domain of unknown function Ilyop_0549 SM00764 Citrate lyase ligase C-terminal domain Ilyop_0569 SM00316 Ribosomal protein S1-like RNA-binding domain Ilyop_0576 SM00382 ATPases associated with a variety of cellular activities Ilyop_0576 SM00994 ClpX C4-type zinc finger Ilyop_0576 SM01086 C-terminal, D2-small domain, of ClpB protein Ilyop_0577 SM00382 ATPases associated with a variety of cellular activities Ilyop_0577 SM00464 Found in ATP-dependent protease La (LON) Ilyop_0589 SM00363 S4 RNA-binding domain Ilyop_0593 SM00845 GatB domain Ilyop_0605 SM01228 Ilyop_0605 Ilyop_0609 SM00935 Outer membrane protein (OmpH-like) Ilyop_0613 SM00047 Lysozyme subfamily 2 Ilyop_0627 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ilyop_0628 SM00902 Iron hydrogenase small subunit Ilyop_0628 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_0629 SM00448 cheY-homologous receiver domain Ilyop_0629 SM00862 Transcriptional regulatory protein, C terminal Ilyop_0630 SM00387 Histidine kinase-like ATPases Ilyop_0630 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_0633 SM00342 helix_turn_helix, arabinose operon control protein Ilyop_0635 SM00902 Iron hydrogenase small subunit Ilyop_0635 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_0651 SM00347 helix_turn_helix multiple antibiotic resistance protein Ilyop_0659 SM00316 Ribosomal protein S1-like RNA-binding domain Ilyop_0659 SM00732 Likely ribonuclease with RNase H fold. Ilyop_0660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ilyop_0660 SM00387 Histidine kinase-like ATPases Ilyop_0665 SM00859 Semialdehyde dehydrogenase, NAD binding domain Ilyop_0671 SM00740 Ilyop_0671 Ilyop_0672 SM00487 DEAD-like helicases superfamily Ilyop_0672 SM00490 helicase superfamily c-terminal domain Ilyop_0675 SM00881 CoA binding domain Ilyop_0679 SM00562 Ilyop_0679 Ilyop_0680 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_0681 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_0681 SM01091 Transporter associated domain Ilyop_0683 SM00028 Tetratricopeptide repeats Ilyop_0687 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_0687 SM00954 Region found in RelA / SpoT proteins Ilyop_0689 SM00902 Iron hydrogenase small subunit Ilyop_0689 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_0690 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ilyop_0698 SM00642 Alpha-amylase domain Ilyop_0700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ilyop_0700 SM00387 Histidine kinase-like ATPases Ilyop_0700 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_0701 SM00448 cheY-homologous receiver domain Ilyop_0701 SM00862 Transcriptional regulatory protein, C terminal Ilyop_0725 SM00382 ATPases associated with a variety of cellular activities Ilyop_0728 SM00354 helix_turn _helix lactose operon repressor Ilyop_0734 SM00481 DNA polymerase alpha chain like domain Ilyop_0737 SM00838 Elongation factor G C-terminus Ilyop_0741 SM00420 helix_turn_helix, Deoxyribose operon repressor Ilyop_0741 SM01134 Ilyop_0741 Ilyop_0750 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0750 SM00866 Ilyop_0750 Ilyop_0752 SM00872 Alpha mannosidase, middle domain Ilyop_0762 SM00422 helix_turn_helix, mercury resistance Ilyop_0770 SM00382 ATPases associated with a variety of cellular activities Ilyop_0774 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_0782 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ilyop_0784 SM00450 Rhodanese Homology Domain Ilyop_0787 SM00028 Tetratricopeptide repeats Ilyop_0788 SM00091 PAS domain Ilyop_0788 SM00267 diguanylate cyclase Ilyop_0789 SM00052 Putative diguanylate phosphodiesterase Ilyop_0790 SM00267 diguanylate cyclase Ilyop_0793 SM00947 Carbonic anhydrase Ilyop_0794 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Ilyop_0819 SM00710 Parallel beta-helix repeats Ilyop_0833 SM00331 Sigma factor PP2C-like phosphatases Ilyop_0833 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Ilyop_0842 SM00905 Dihydroneopterin aldolase Ilyop_0850 SM01120 Ilyop_0850 Ilyop_0853 SM00357 Cold shock protein domain Ilyop_0863 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Ilyop_0863 SM00475 5'-3' exonuclease Ilyop_0863 SM00482 DNA polymerase A domain Ilyop_0865 SM00904 Riboflavin kinase Ilyop_0872 SM00382 ATPases associated with a variety of cellular activities Ilyop_0880 SM00493 Ilyop_0880 Ilyop_0888 SM00938 Nitrogen regulatory protein P-II Ilyop_0894 SM00871 Bacterial transcription activator, effector binding domain Ilyop_0912 SM00938 Nitrogen regulatory protein P-II Ilyop_0914 SM00938 Nitrogen regulatory protein P-II Ilyop_0929 SM01321 Ilyop_0929 Ilyop_0933 SM00363 S4 RNA-binding domain Ilyop_0934 SM00257 Lysin motif Ilyop_0937 SM00642 Alpha-amylase domain Ilyop_0938 SM01321 Ilyop_0938 Ilyop_0940 SM00518 AP endonuclease family 2 Ilyop_0946 SM00829 Enoylreductase Ilyop_0948 SM00357 Cold shock protein domain Ilyop_0949 SM00382 ATPases associated with a variety of cellular activities Ilyop_0950 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_0951 SM00052 Putative diguanylate phosphodiesterase Ilyop_0953 SM00052 Putative diguanylate phosphodiesterase Ilyop_0953 SM00267 diguanylate cyclase Ilyop_0954 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_0973 SM01078 Ilyop_0973 Ilyop_0974 SM00387 Histidine kinase-like ATPases Ilyop_0975 SM00448 cheY-homologous receiver domain Ilyop_0979 SM00422 helix_turn_helix, mercury resistance Ilyop_0980 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ilyop_0988 SM00893 Electron transfer flavoprotein domain Ilyop_0989 SM00893 Electron transfer flavoprotein domain Ilyop_0990 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_0990 SM00895 Ilyop_0990 Ilyop_0994 SM00849 Metallo-beta-lactamase superfamily Ilyop_0995 SM00287 Bacterial SH3 domain homologues Ilyop_1001 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_1009 SM00487 DEAD-like helicases superfamily Ilyop_1009 SM00490 helicase superfamily c-terminal domain Ilyop_1013 SM00507 HNH nucleases Ilyop_1019 SM00646 Ilyop_1019 Ilyop_1048 SM00470 ParB-like nuclease domain Ilyop_1053 SM00487 DEAD-like helicases superfamily Ilyop_1057 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_1066 SM00857 Resolvase, N terminal domain Ilyop_1071 SM00855 Phosphoglycerate mutase family Ilyop_1086 SM00968 SMC proteins Flexible Hinge Domain Ilyop_1087 SM00382 ATPases associated with a variety of cellular activities Ilyop_1087 SM01086 C-terminal, D2-small domain, of ClpB protein Ilyop_1091 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ilyop_1093 SM01092 CO dehydrogenase flavoprotein C-terminal domain Ilyop_1095 SM00852 Probable molybdopterin binding domain Ilyop_1103 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_1110 SM00382 ATPases associated with a variety of cellular activities Ilyop_1118 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_1118 SM00924 MgtE intracellular N domain Ilyop_1120 SM00363 S4 RNA-binding domain Ilyop_1124 SM00861 Transketolase, pyrimidine binding domain Ilyop_1126 SM00341 Helicase and RNase D C-terminal Ilyop_1126 SM00487 DEAD-like helicases superfamily Ilyop_1126 SM00490 helicase superfamily c-terminal domain Ilyop_1126 SM00956 Ilyop_1126 Ilyop_1131 SM00347 helix_turn_helix multiple antibiotic resistance protein Ilyop_1137 SM00450 Rhodanese Homology Domain Ilyop_1140 SM00347 helix_turn_helix multiple antibiotic resistance protein Ilyop_1151 SM00346 helix_turn_helix isocitrate lyase regulation Ilyop_1153 SM00796 Allophanate hydrolase subunit 1 Ilyop_1154 SM00797 Allophanate hydrolase subunit 2 Ilyop_1161 SM01329 Ilyop_1161 Ilyop_1164 SM00917 LeuA allosteric (dimerisation) domain Ilyop_1168 SM00849 Metallo-beta-lactamase superfamily Ilyop_1171 SM00357 Cold shock protein domain Ilyop_1180 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. Ilyop_1184 SM00876 Biotin and Thiamin Synthesis associated domain Ilyop_1194 SM00382 ATPases associated with a variety of cellular activities Ilyop_1194 SM00930 Ilyop_1194 Ilyop_1206 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_1207 SM00900 Ilyop_1207 Ilyop_1212 SM00886 Stress responsive A/B Barrel Domain Ilyop_1218 SM00091 PAS domain Ilyop_1219 SM00331 Sigma factor PP2C-like phosphatases Ilyop_1220 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ilyop_1221 SM00902 Iron hydrogenase small subunit Ilyop_1221 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ilyop_1234 SM00387 Histidine kinase-like ATPases Ilyop_1238 SM00382 ATPases associated with a variety of cellular activities Ilyop_1239 SM00382 ATPases associated with a variety of cellular activities Ilyop_1243 SM00382 ATPases associated with a variety of cellular activities Ilyop_1259 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_1262 SM00382 ATPases associated with a variety of cellular activities Ilyop_1265 SM00382 ATPases associated with a variety of cellular activities Ilyop_1271 SM00028 Tetratricopeptide repeats Ilyop_1273 SM00480 DNA polymerase III beta subunit Ilyop_1276 SM01207 Ilyop_1276 Ilyop_1280 SM00052 Putative diguanylate phosphodiesterase Ilyop_1280 SM00267 diguanylate cyclase Ilyop_1284 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1285 SM00316 Ribosomal protein S1-like RNA-binding domain Ilyop_1285 SM00322 K homology RNA-binding domain Ilyop_1296 SM00342 helix_turn_helix, arabinose operon control protein Ilyop_1301 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1302 SM00852 Probable molybdopterin binding domain Ilyop_1303 SM00852 Probable molybdopterin binding domain Ilyop_1304 SM00382 ATPases associated with a variety of cellular activities Ilyop_1309 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Ilyop_1313 SM00382 ATPases associated with a variety of cellular activities Ilyop_1315 SM00347 helix_turn_helix multiple antibiotic resistance protein Ilyop_1318 SM00740 Ilyop_1318 Ilyop_1321 SM00650 Ribosomal RNA adenine dimethylases Ilyop_1329 SM00479 Ilyop_1329 Ilyop_1329 SM00481 DNA polymerase alpha chain like domain Ilyop_1332 SM01387 Ilyop_1332 Ilyop_1333 SM00382 ATPases associated with a variety of cellular activities Ilyop_1334 SM00977 TilS substrate C-terminal domain Ilyop_1336 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1338 SM00487 DEAD-like helicases superfamily Ilyop_1338 SM00490 helicase superfamily c-terminal domain Ilyop_1344 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Ilyop_1349 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_1350 SM00487 DEAD-like helicases superfamily Ilyop_1350 SM00488 Ilyop_1350 Ilyop_1350 SM00491 Ilyop_1350 Ilyop_1358 SM00864 Tubulin/FtsZ family, GTPase domain Ilyop_1358 SM00865 Tubulin/FtsZ family, C-terminal domain Ilyop_1359 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ilyop_1371 SM00883 Chaperonin 10 Kd subunit Ilyop_1373 SM00382 ATPases associated with a variety of cellular activities Ilyop_1373 SM00962 SRP54-type protein, GTPase domain Ilyop_1373 SM00963 SRP54-type protein, helical bundle domain Ilyop_1375 SM00788 Adenylosuccinate synthetase Ilyop_1383 SM00322 K homology RNA-binding domain Ilyop_1383 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_1385 SM00387 Histidine kinase-like ATPases Ilyop_1393 SM00382 ATPases associated with a variety of cellular activities Ilyop_1402 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1408 SM00938 Nitrogen regulatory protein P-II Ilyop_1409 SM00938 Nitrogen regulatory protein P-II Ilyop_1426 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_1443 SM00937 Ilyop_1443 Ilyop_1452 SM00257 Lysin motif Ilyop_1453 SM00357 Cold shock protein domain Ilyop_1453 SM00382 ATPases associated with a variety of cellular activities Ilyop_1453 SM00959 Rho termination factor, N-terminal domain Ilyop_1455 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1457 SM00478 endonuclease III Ilyop_1462 SM01133 Ilyop_1462 Ilyop_1463 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Ilyop_1470 SM00878 Biotin carboxylase C-terminal domain Ilyop_1472 SM00481 DNA polymerase alpha chain like domain Ilyop_1474 SM00487 DEAD-like helicases superfamily Ilyop_1474 SM00490 helicase superfamily c-terminal domain Ilyop_1478 SM00382 ATPases associated with a variety of cellular activities Ilyop_1483 SM00861 Transketolase, pyrimidine binding domain Ilyop_1487 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1492 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ilyop_1492 SM00387 Histidine kinase-like ATPases Ilyop_1492 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_1493 SM00448 cheY-homologous receiver domain Ilyop_1493 SM00862 Transcriptional regulatory protein, C terminal Ilyop_1499 SM00244 prohibitin homologues Ilyop_1500 SM00244 prohibitin homologues Ilyop_1502 SM00382 ATPases associated with a variety of cellular activities Ilyop_1504 SM00316 Ribosomal protein S1-like RNA-binding domain Ilyop_1505 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1506 SM00358 Double-stranded RNA binding motif Ilyop_1506 SM00535 Ribonuclease III family Ilyop_1507 SM00825 Beta-ketoacyl synthase Ilyop_1508 SM00823 Phosphopantetheine attachment site Ilyop_1509 SM00822 Ilyop_1509 Ilyop_1510 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ilyop_1529 SM00382 ATPases associated with a variety of cellular activities Ilyop_1532 SM01400 Ilyop_1532 Ilyop_1536 SM00271 DnaJ molecular chaperone homology domain Ilyop_1537 SM00028 Tetratricopeptide repeats Ilyop_1542 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_1549 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1554 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_1555 SM00382 ATPases associated with a variety of cellular activities Ilyop_1556 SM00382 ATPases associated with a variety of cellular activities Ilyop_1567 SM00341 Helicase and RNase D C-terminal Ilyop_1567 SM00487 DEAD-like helicases superfamily Ilyop_1567 SM00490 helicase superfamily c-terminal domain Ilyop_1567 SM00956 Ilyop_1567 Ilyop_1568 SM00062 Bacterial periplasmic substrate-binding proteins Ilyop_1575 SM00354 helix_turn _helix lactose operon repressor Ilyop_1577 SM00900 Ilyop_1577 Ilyop_1584 SM00387 Histidine kinase-like ATPases Ilyop_1584 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_1584 SM00448 cheY-homologous receiver domain Ilyop_1585 SM00448 cheY-homologous receiver domain Ilyop_1585 SM00862 Transcriptional regulatory protein, C terminal Ilyop_1594 SM00450 Rhodanese Homology Domain Ilyop_1604 SM00267 diguanylate cyclase Ilyop_1604 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_1608 SM00422 helix_turn_helix, mercury resistance Ilyop_1610 SM00829 Enoylreductase Ilyop_1612 SM00880 Ilyop_1612 Ilyop_1616 SM00382 ATPases associated with a variety of cellular activities Ilyop_1621 SM00347 helix_turn_helix multiple antibiotic resistance protein Ilyop_1622 SM00257 Lysin motif Ilyop_1641 SM00849 Metallo-beta-lactamase superfamily Ilyop_1649 SM00857 Resolvase, N terminal domain Ilyop_1652 SM00382 ATPases associated with a variety of cellular activities Ilyop_1652 SM00487 DEAD-like helicases superfamily Ilyop_1669 SM00357 Cold shock protein domain Ilyop_1669 SM00955 Ilyop_1669 Ilyop_1670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_1671 SM00909 Sporulation and spore germination Ilyop_1672 SM00646 Ilyop_1672 Ilyop_1673 SM01323 Ilyop_1673 Ilyop_1674 SM00271 DnaJ molecular chaperone homology domain Ilyop_1680 SM00267 diguanylate cyclase Ilyop_1687 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Ilyop_1692 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ilyop_1697 SM00487 DEAD-like helicases superfamily Ilyop_1697 SM00490 helicase superfamily c-terminal domain Ilyop_1701 SM00986 Uracil DNA glycosylase superfamily Ilyop_1701 SM00987 UreE urease accessory protein, C-terminal domain Ilyop_1702 SM00849 Metallo-beta-lactamase superfamily Ilyop_1704 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_1706 SM00244 prohibitin homologues Ilyop_1713 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ilyop_1713 SM00245 tail specific protease Ilyop_1714 SM00363 S4 RNA-binding domain Ilyop_1716 SM00861 Transketolase, pyrimidine binding domain Ilyop_1718 SM01103 Ilyop_1718 Ilyop_1719 SM00849 Metallo-beta-lactamase superfamily Ilyop_1724 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1727 SM00382 ATPases associated with a variety of cellular activities Ilyop_1733 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_1733 SM00382 ATPases associated with a variety of cellular activities Ilyop_1734 SM00316 Ribosomal protein S1-like RNA-binding domain Ilyop_1751 SM00936 Penicillin-binding protein 5, C-terminal domain Ilyop_1754 SM00478 endonuclease III Ilyop_1754 SM00525 Ilyop_1754 Ilyop_1760 SM01192 Ilyop_1760 Ilyop_1760 SM01193 Ilyop_1760 Ilyop_1763 SM00382 ATPases associated with a variety of cellular activities Ilyop_1780 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_1782 SM00662 RNA polymerases D Ilyop_1783 SM00363 S4 RNA-binding domain Ilyop_1783 SM01390 Ilyop_1783 Ilyop_1787 SM00316 Ribosomal protein S1-like RNA-binding domain Ilyop_1799 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Ilyop_1800 SM01374 Ilyop_1800 Ilyop_1807 SM01382 Ilyop_1807 Ilyop_1807 SM01383 Ilyop_1807 Ilyop_1811 SM01403 Ilyop_1811 Ilyop_1813 SM00838 Elongation factor G C-terminus Ilyop_1813 SM00889 Elongation factor G, domain IV Ilyop_1816 SM00382 ATPases associated with a variety of cellular activities Ilyop_1832 SM00382 ATPases associated with a variety of cellular activities Ilyop_1841 SM00840 Ilyop_1841 Ilyop_1845 SM00463 Small MutS-related domain Ilyop_1845 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Ilyop_1845 SM00534 ATPase domain of DNA mismatch repair MUTS family Ilyop_1849 SM00864 Tubulin/FtsZ family, GTPase domain Ilyop_1849 SM00865 Tubulin/FtsZ family, C-terminal domain Ilyop_1850 SM00842 Cell division protein FtsA Ilyop_1862 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_1862 SM00419 helix_turn_helix, cAMP Regulatory protein Ilyop_1865 SM00382 ATPases associated with a variety of cellular activities Ilyop_1874 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_1882 SM00062 Bacterial periplasmic substrate-binding proteins Ilyop_1884 SM00382 ATPases associated with a variety of cellular activities Ilyop_1888 SM00861 Transketolase, pyrimidine binding domain Ilyop_1899 SM00363 S4 RNA-binding domain Ilyop_1901 SM00487 DEAD-like helicases superfamily Ilyop_1901 SM00490 helicase superfamily c-terminal domain Ilyop_1901 SM00982 Ilyop_1901 Ilyop_1901 SM01058 CarD-like/TRCF domain Ilyop_1902 SM01228 Ilyop_1902 Ilyop_1904 SM00393 Putative single-stranded nucleic acids-binding domain Ilyop_1906 SM01234 Ilyop_1906 Ilyop_1916 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_1917 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_1973 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_1992 SM00470 ParB-like nuclease domain Ilyop_2005 SM00900 Ilyop_2005 Ilyop_2027 SM00919 Malic enzyme, NAD binding domain Ilyop_2027 SM01274 Ilyop_2027 Ilyop_2086 SM01329 Ilyop_2086 Ilyop_2094 SM01329 Ilyop_2094 Ilyop_2096 SM01329 Ilyop_2096 Ilyop_2103 SM01007 Class II Aldolase and Adducin N-terminal domain Ilyop_2108 SM00893 Electron transfer flavoprotein domain Ilyop_2112 SM00822 Ilyop_2112 Ilyop_2114 SM00882 Coenzyme A transferase Ilyop_2115 SM00882 Coenzyme A transferase Ilyop_2121 SM00382 ATPases associated with a variety of cellular activities Ilyop_2126 SM00420 helix_turn_helix, Deoxyribose operon repressor Ilyop_2126 SM01134 Ilyop_2126 Ilyop_2133 SM00354 helix_turn _helix lactose operon repressor Ilyop_2134 SM00822 Ilyop_2134 Ilyop_2139 SM00342 helix_turn_helix, arabinose operon control protein Ilyop_2140 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ilyop_2140 SM00895 Ilyop_2140 Ilyop_2148 SM00829 Enoylreductase Ilyop_2149 SM00346 helix_turn_helix isocitrate lyase regulation Ilyop_2153 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_2160 SM00346 helix_turn_helix isocitrate lyase regulation Ilyop_2167 SM00448 cheY-homologous receiver domain Ilyop_2167 SM00862 Transcriptional regulatory protein, C terminal Ilyop_2168 SM00387 Histidine kinase-like ATPases Ilyop_2168 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2170 SM00563 Phosphate acyltransferases Ilyop_2171 SM00563 Phosphate acyltransferases Ilyop_2176 SM00091 PAS domain Ilyop_2176 SM00267 diguanylate cyclase Ilyop_2183 SM00670 Large family of predicted nucleotide-binding domains Ilyop_2184 SM00852 Probable molybdopterin binding domain Ilyop_2189 SM00382 ATPases associated with a variety of cellular activities Ilyop_2191 SM00448 cheY-homologous receiver domain Ilyop_2191 SM00862 Transcriptional regulatory protein, C terminal Ilyop_2196 SM01209 Ilyop_2196 Ilyop_2196 SM01210 Ilyop_2196 Ilyop_2197 SM00798 AICARFT/IMPCHase bienzyme Ilyop_2197 SM00851 MGS-like domain Ilyop_2203 SM01001 AIR carboxylase Ilyop_2204 SM01211 Ilyop_2204 Ilyop_2207 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Ilyop_2208 SM00851 MGS-like domain Ilyop_2208 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ilyop_2208 SM01209 Ilyop_2208 Ilyop_2210 SM00052 Putative diguanylate phosphodiesterase Ilyop_2210 SM00091 PAS domain Ilyop_2210 SM00267 diguanylate cyclase Ilyop_2214 SM00382 ATPases associated with a variety of cellular activities Ilyop_2215 SM00382 ATPases associated with a variety of cellular activities Ilyop_2220 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_2220 SM00419 helix_turn_helix, cAMP Regulatory protein Ilyop_2222 SM00506 Appr-1"-p processing enzyme Ilyop_2227 SM00052 Putative diguanylate phosphodiesterase Ilyop_2227 SM00091 PAS domain Ilyop_2227 SM00267 diguanylate cyclase Ilyop_2229 SM00382 ATPases associated with a variety of cellular activities Ilyop_2233 SM00382 ATPases associated with a variety of cellular activities Ilyop_2237 SM00267 diguanylate cyclase Ilyop_2242 SM00984 UDP binding domain Ilyop_2243 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_2248 SM00267 diguanylate cyclase Ilyop_2255 SM00481 DNA polymerase alpha chain like domain Ilyop_2263 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_2267 SM00342 helix_turn_helix, arabinose operon control protein Ilyop_2270 SM00354 helix_turn _helix lactose operon repressor Ilyop_2273 SM00640 Glycosyl hydrolases family 32 Ilyop_2281 SM00900 Ilyop_2281 Ilyop_2310 SM00091 PAS domain Ilyop_2310 SM00387 Histidine kinase-like ATPases Ilyop_2310 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2311 SM00448 cheY-homologous receiver domain Ilyop_2312 SM00387 Histidine kinase-like ATPases Ilyop_2312 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2312 SM00448 cheY-homologous receiver domain Ilyop_2313 SM00091 PAS domain Ilyop_2313 SM00267 diguanylate cyclase Ilyop_2313 SM00448 cheY-homologous receiver domain Ilyop_2313 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_2314 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_2321 SM00986 Uracil DNA glycosylase superfamily Ilyop_2321 SM00987 UreE urease accessory protein, C-terminal domain Ilyop_2322 SM00644 Ilyop_2322 Ilyop_2335 SM00062 Bacterial periplasmic substrate-binding proteins Ilyop_2335 SM00387 Histidine kinase-like ATPases Ilyop_2335 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2337 SM00267 diguanylate cyclase Ilyop_2340 SM00448 cheY-homologous receiver domain Ilyop_2340 SM00862 Transcriptional regulatory protein, C terminal Ilyop_2341 SM00387 Histidine kinase-like ATPases Ilyop_2341 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2341 SM00448 cheY-homologous receiver domain Ilyop_2343 SM00877 Ilyop_2343 Ilyop_2346 SM00877 Ilyop_2346 Ilyop_2352 SM00877 Ilyop_2352 Ilyop_2353 SM00877 Ilyop_2353 Ilyop_2360 SM00842 Cell division protein FtsA Ilyop_2379 SM01004 Delta-aminolevulinic acid dehydratase Ilyop_2386 SM00267 diguanylate cyclase Ilyop_2390 SM00382 ATPases associated with a variety of cellular activities Ilyop_2392 SM00267 diguanylate cyclase Ilyop_2392 SM01079 Ilyop_2392 Ilyop_2393 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_2396 SM00091 PAS domain Ilyop_2396 SM00387 Histidine kinase-like ATPases Ilyop_2397 SM00448 cheY-homologous receiver domain Ilyop_2401 SM00052 Putative diguanylate phosphodiesterase Ilyop_2401 SM00091 PAS domain Ilyop_2401 SM00267 diguanylate cyclase Ilyop_2408 SM00830 Chorismate mutase type II Ilyop_2427 SM01018 B12 binding domain Ilyop_2430 SM00357 Cold shock protein domain Ilyop_2431 SM00902 Iron hydrogenase small subunit Ilyop_2434 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_2438 SM00465 GIY-YIG type nucleases (URI domain) Ilyop_2440 SM00387 Histidine kinase-like ATPases Ilyop_2440 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2441 SM00448 cheY-homologous receiver domain Ilyop_2441 SM00862 Transcriptional regulatory protein, C terminal Ilyop_2443 SM01259 Ilyop_2443 Ilyop_2461 SM00849 Metallo-beta-lactamase superfamily Ilyop_2478 SM00382 ATPases associated with a variety of cellular activities Ilyop_2480 SM00267 diguanylate cyclase Ilyop_2487 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Ilyop_2493 SM00479 Ilyop_2493 Ilyop_2497 SM00448 cheY-homologous receiver domain Ilyop_2497 SM00850 LytTr DNA-binding domain Ilyop_2498 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ilyop_2498 SM00387 Histidine kinase-like ATPases Ilyop_2502 SM00829 Enoylreductase Ilyop_2503 SM00878 Biotin carboxylase C-terminal domain Ilyop_2511 SM00382 ATPases associated with a variety of cellular activities Ilyop_2512 SM00382 ATPases associated with a variety of cellular activities Ilyop_2517 SM00046 Diacylglycerol kinase catalytic domain (presumed) Ilyop_2519 SM00480 DNA polymerase III beta subunit Ilyop_2520 SM00870 Ilyop_2520 Ilyop_2522 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ilyop_2522 SM00387 Histidine kinase-like ATPases Ilyop_2522 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2523 SM00448 cheY-homologous receiver domain Ilyop_2523 SM00862 Transcriptional regulatory protein, C terminal Ilyop_2528 SM01230 Ilyop_2528 Ilyop_2531 SM00382 ATPases associated with a variety of cellular activities Ilyop_2531 SM00464 Found in ATP-dependent protease La (LON) Ilyop_2532 SM00155 Phospholipase D. Active site motifs. Ilyop_2533 SM00481 DNA polymerase alpha chain like domain Ilyop_2535 SM00422 helix_turn_helix, mercury resistance Ilyop_2539 SM00869 Autotransporter beta-domain Ilyop_2541 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_2545 SM00316 Ribosomal protein S1-like RNA-binding domain Ilyop_2553 SM00448 cheY-homologous receiver domain Ilyop_2554 SM00387 Histidine kinase-like ATPases Ilyop_2571 SM00450 Rhodanese Homology Domain Ilyop_2578 SM00903 Flavin reductase like domain Ilyop_2590 SM00851 MGS-like domain Ilyop_2590 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ilyop_2591 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Ilyop_2593 SM00859 Semialdehyde dehydrogenase, NAD binding domain Ilyop_2603 SM01329 Ilyop_2603 Ilyop_2607 SM00841 Elongation factor P, C-terminal Ilyop_2607 SM01185 Ilyop_2607 Ilyop_2611 SM00507 HNH nucleases Ilyop_2613 SM00347 helix_turn_helix multiple antibiotic resistance protein Ilyop_2619 SM00382 ATPases associated with a variety of cellular activities Ilyop_2623 SM00382 ATPases associated with a variety of cellular activities Ilyop_2627 SM00838 Elongation factor G C-terminus Ilyop_2627 SM00889 Elongation factor G, domain IV Ilyop_2628 SM00052 Putative diguanylate phosphodiesterase Ilyop_2632 SM00411 bacterial (prokaryotic) histone like domain Ilyop_2633 SM00450 Rhodanese Homology Domain Ilyop_2637 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ilyop_2644 SM00966 SpoVT / AbrB like domain Ilyop_2645 SM00450 Rhodanese Homology Domain Ilyop_2649 SM00155 Phospholipase D. Active site motifs. Ilyop_2656 SM00450 Rhodanese Homology Domain Ilyop_2658 SM00382 ATPases associated with a variety of cellular activities Ilyop_2661 SM00782 PhnA Zinc-Ribbon Ilyop_2667 SM01130 Ilyop_2667 Ilyop_2668 SM00859 Semialdehyde dehydrogenase, NAD binding domain Ilyop_2709 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_2714 SM00062 Bacterial periplasmic substrate-binding proteins Ilyop_2715 SM00448 cheY-homologous receiver domain Ilyop_2715 SM00850 LytTr DNA-binding domain Ilyop_2722 SM00729 Elongator protein 3, MiaB family, Radical SAM Ilyop_2722 SM00876 Biotin and Thiamin Synthesis associated domain Ilyop_2736 SM00382 ATPases associated with a variety of cellular activities Ilyop_2742 SM00506 Appr-1"-p processing enzyme Ilyop_2744 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_2764 SM00954 Region found in RelA / SpoT proteins Ilyop_2767 SM00382 ATPases associated with a variety of cellular activities Ilyop_2771 SM00450 Rhodanese Homology Domain Ilyop_2773 SM00450 Rhodanese Homology Domain Ilyop_2774 SM00450 Rhodanese Homology Domain Ilyop_2782 SM00116 Domain in cystathionine beta-synthase and other proteins. Ilyop_2782 SM01240 Ilyop_2782 Ilyop_2783 SM00382 ATPases associated with a variety of cellular activities Ilyop_2783 SM01086 C-terminal, D2-small domain, of ClpB protein Ilyop_2784 SM00100 Cyclic nucleotide-monophosphate binding domain Ilyop_2788 SM01350 Ilyop_2788 Ilyop_2798 SM00851 MGS-like domain Ilyop_2802 SM00411 bacterial (prokaryotic) histone like domain Ilyop_2814 SM00052 Putative diguanylate phosphodiesterase Ilyop_2814 SM00267 diguanylate cyclase Ilyop_2816 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ilyop_2816 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ilyop_2822 SM00849 Metallo-beta-lactamase superfamily Ilyop_2837 SM00448 cheY-homologous receiver domain Ilyop_2837 SM00862 Transcriptional regulatory protein, C terminal Ilyop_2838 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ilyop_2838 SM00387 Histidine kinase-like ATPases Ilyop_2838 SM00388 His Kinase A (phosphoacceptor) domain Ilyop_2839 SM00382 ATPases associated with a variety of cellular activities Ilyop_2850 SM00900 Ilyop_2850 Ilyop_2851 SM00900 Ilyop_2851 Ilyop_2854 SM00857 Resolvase, N terminal domain Ilyop_2856 SM00267 diguanylate cyclase Ilyop_2857 SM00487 DEAD-like helicases superfamily Ilyop_2870 SM00857 Resolvase, N terminal domain Ilyop_2880 SM00530 Helix-turn-helix XRE-family like proteins Ilyop_2896 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Ilyop_2896 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Ilyop_2896 SM00493 Ilyop_2896 Ilyop_2906 SM00857 Resolvase, N terminal domain Ilyop_2908 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Ilyop_2912 SM00347 helix_turn_helix multiple antibiotic resistance protein Ilyop_2913 SM00829 Enoylreductase Ilyop_2922 SM00893 Electron transfer flavoprotein domain Ilyop_2923 SM00893 Electron transfer flavoprotein domain Ilyop_2930 SM00895 Ilyop_2930 Ilyop_2932 SM00857 Resolvase, N terminal domain Ilyop_2934 SM00028 Tetratricopeptide repeats