LOCUS MH616843 5901 bp DNA circular ENV 05-AUG-2018 DEFINITION Inoviridae sp. isolate ctbd25, complete genome. ACCESSION MH616843 VERSION MH616843.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074550 Sequence Read Archive: SRR7122373 KEYWORDS ENV. SOURCE Inoviridae sp. (animal metagenome) ORGANISM Inoviridae sp. Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 5901) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 5901) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 21.632096x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5901 /organism="Inoviridae sp." /mol_type="genomic DNA" /isolate="ctbd25" /isolation_source="seabass tissue" /db_xref="taxon:2219103" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043873; metagenomic; derived from metagenome: animal metagenome" CDS 1..1398 /inference="similar to AA sequence:UniProtKB:R9TE48_9VIRU" /codon_start=1 /transl_table=11 /product="Receptor-binding protein" /protein_id="AXH73955.1" /translation="MKGLIFAFGLIPALFLSNVSASIFDGASYLAPKIDSSSTYTCYV YTNASTDGMSYEACYQHIIADVQQYLVYSNSDAPYSFSELSNYTDSNGIIKATRKSGT CFINSNSEKQCFPNTSTETIGRIVNKVDSNSTSCPPDENPLYTFERDTNNDGKVDVCY NPQELDQLSNCAAAANGGKILPIGGNTAPTVCAVNDDGTSCGFSQVTAGNSTYYSVNL EINCFGDADVPEYDPDAALEQPQDEQCTPYGDGFACSADPSNTCDANGVCPDNCGYVN GQFICFRDVECAGAICENPPVTDPDNPDPTDPDPDNPDPTDPTEPCVGDNCTPTTGGG GGSNFVFDYDKMKSKIDESLKGLLDENEMDDGKTTQDEISDNADEMASKYDDFASNSL FDEIINKPEEGVFDGMKNMLPSGGSCTSYSFGKVSFDFCSLADRLRPILSFVFAFLTL IYLRSVFFNTIKGND" CDS 1398..1739 /inference="protein motif:CDD:106886" /codon_start=1 /transl_table=11 /product="minor coat protein" /protein_id="AXH73960.1" /translation="MPLPAIIGLPALISFIVGIVSSVFTWLLQRFTFKLAVFLAALTA ISAALNAFFTLMSGYVGQLVQTAPAGFQAAAYFLPANTGLCISLILGAEVASAVYSLT FKVIKLKVEAA" CDS 2123..2899 /inference="protein motif:CDD:222771" /codon_start=1 /transl_table=11 /product="assembly protein" /protein_id="AXH73961.1" /translation="MMDSQAREGFAEHVVHCRRLDRLSIPFITPLTRYAGLEIRPPKL HWGIVKYGSSDSSPMLERWTYTGTDLYNAYDTRQVFQEDSCAIHSMLPPHTIYGRYTS NAEHTKRRLNRSINKFLATAKPRATFFIGLMIASLGFLVWPSSDDEPATIQAKVEAQK QVDNVTISSTPFDGVVITASVKGTTSFDYIFQRGDDVVYPEHMGFKVRYVSECKASLT DGKSTYYLTCSPYRSPSSPPQPREGDVGGRDELIQELASN" CDS 2942..3145 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73956.1" /translation="MYINPIRKIKNTDGVFLYNLHCANRYPYIINKLKISLKSVYINQ KECIMNTVDNNQRGFKNGNSIRL" CDS 3123..3335 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73957.1" /translation="MATQSDFNFHLNTKSLLHADYEGISFFWEAGEDALTIEGRSYDR AIYLPKSSAAVAKRAMVKFIGETFNV" CDS 3963..5024 /inference="protein motif:CDD:273723" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73962.1" /translation="MIDWATVKIELVHEPIPSDRFIKVASTGEIEFETVCRSHVRGSY ESSISVRSLGSDGNGNATILQIDGNPSKFIQGHNVFGSNDFVALVLHTFIHVTGLLNL TYTPDEYWGVYNGKYSVSRVDINESFELENLLNVRSWLKAAELKSKTRHGRPTSKGGT VYWGQHSRRWALKAYCKYDEINSGKKHNLPDHLKKTDIADWAQSKLRIELVLRGKQLE QDGVFQGSDLTTERVIELYNTYLSRLEMAKNVTLTSNKVIDLPRKLQSTYLLWTQGHD LKTLLPKPTFYRHRKELMGHDIDINMSCDQPDQSNVIPLLRVLEAKPVGVPTWALEQG LVYQWENHKTHVSYLKRVS" CDS 5024..5383 /inference="similar to AA sequence:INSD:CAA32514.1" /note="gene V product" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73959.1" /translation="MENTQGLLIAGVLRGYRPRTYNNEIQGYELGIAIQKPDGFGGFS EDVKIVRVSENQSQHVQNAANRLLGNTILVSVYESAYTNRGGKGIAQLNYVPDTHIID LDTGVNPFTGEVKTKAA" CDS 5667..5891 /inference="protein motif:Scop:sp|P69539|CAPSD_BPFD" /note="Capsid protein G8P" /codon_start=1 /transl_table=11 /product="capsid protein" /protein_id="AXH73958.1" /translation="MNSAQKLRLQLGATALAVAGSVGSAFASGEAAVFTAISDKVTEL EGYAWPVIGVVTIAMVSITLFRKFATKSAR" ORIGIN 1 atgaaagggc tgatattcgc ttttgggctg ataccagccc tttttttatc taatgtaagt 61 gcctctattt ttgacggtgc tagttatctt gcaccaaaaa ttgactcatc aagtacttac 121 acttgttatg tttatacaaa cgcctccact gacggcatga gctatgaagc ttgttatcag 181 catattattg ctgacgttca acaatatctt gtttacagta actctgatgc accttactct 241 ttttctgaac tttctaatta tacagattcc aatggtatta ttaaggcaac tcgtaaaagc 301 ggaacttgct ttataaattc aaatagtgaa aaacaatgct tcccaaatac atcaactgaa 361 acaataggcc gaattgttaa taaagtagat tccaacagta cttcgtgccc tcctgatgaa 421 aatccgcttt atacttttga gcgtgatact aataatgatg gtaaagtcga cgtttgctat 481 aatccccaag aattagacca actttcaaac tgtgctgccg ctgctaatgg tggaaagatt 541 ttgccaattg gcggtaatac tgcaccaaca gtatgcgcag tcaatgacga tggcaccagt 601 tgtggttttt cccaagtaac tgccggtaat tcaacttact attcagtcaa tttagaaatc 661 aattgttttg gtgatgctga cgtacctgaa tacgaccccg atgcagcctt agagcaacct 721 caagatgaac agtgtacgcc ttacggtgac ggcttcgctt gctctgctga tccttcaaac 781 acttgtgatg ctaatggcgt ttgtcctgac aattgcggct atgttaacgg ccaatttatt 841 tgctttcgtg acgttgaatg tgctggcgct atttgtgaaa accccccagt cactgatcca 901 gacaatccag acccaacaga cccagatcca gacaatccag acccaacaga cccgactgag 961 ccatgtgtgg gcgataattg cacacctaca acgggtggtg gcggtggtag taacttcgtt 1021 tttgattatg acaagatgaa atcaaaaatt gatgaatcgt taaagggttt actcgacgaa 1081 aacgaaatgg atgacggcaa gaccacacaa gacgaaatta gtgataacgc tgatgaaatg 1141 gcctctaaat atgatgactt tgcatcaaat tcactttttg acgaaattat caataaacca 1201 gaggaaggcg tatttgatgg aatgaaaaac atgctaccta gtggcggttc ttgcacgtcg 1261 tattcatttg gcaaagtaag ctttgatttt tgctcactag ccgacagatt aagaccgata 1321 ctttcatttg tttttgcttt cttaacgctg atttatttgc gcagcgtctt ctttaataca 1381 atcaagggga acgactaatg ccattaccag ccataattgg tttaccagcg ttaataagtt 1441 ttatcgttgg catagtatca agtgtattca cttggctgtt gcaacgattt acgttcaagc 1501 ttgctgtgtt tttggcagct cttaccgcta tttccgcagc tcttaacgct ttctttacgt 1561 taatgtcggg atatgtcggg caactagttc aaacagcccc cgcaggcttt caggcagctg 1621 catacttttt accagccaac actggtttat gtattagtct gattctaggc gctgaggtag 1681 ccagtgcagt ttattcatta acttttaaag tgatcaaact aaaagttgag gctgcatagt 1741 gaccgttcac gttgttactg ggaaattagg cgcgggcaaa acgcttgtcg cagtatcgcg 1801 tatacagcgt tatttaaatc aaggtcggtt tatcgtaacc aatcttgatt taaatttaga 1861 atacctaatc aatccgttcg caaagcaaac caatgtaata cgggtcccag ataggccaag 1921 cgtagaagac tttgaaagtt taccgagtcc gtaccagggc gattattcag aggaaaaatc 1981 tggccttatt gtcttggatg agtgcgcgac ttggtttaat agtcggacat ggaacgagaa 2041 gggaagaaaa gcgattattg attggctact tcatgcaaga aagctaggct gggatattat 2101 ttttatcatt cagaatgtgt caatgatgga ctcacaagct cgtgaaggtt ttgctgagca 2161 tgtggttcat tgtcgtcgct tagatagatt atctatccct tttataacac cgttaacacg 2221 ctatgcaggt cttgaaatta ggccgcctaa acttcattgg ggcattgtaa agtatggtag 2281 ctcagatagt tcaccgatgc ttgagcgatg gacttacaca gggacagatc tctataacgc 2341 atatgatacc agacaggttt tccaagaaga ctcttgtgca atccattcaa tgttgccacc 2401 acacactatt tacgggagat atacctcaaa tgcagagcac acaaagcgtc gacttaaccg 2461 ttcaatcaat aaatttctcg caactgcgaa gcctcgcgca acctttttta taggcttgat 2521 gattgcatcg ctgggctttc ttgtgtggcc gagtagcgat gatgaacccg caaccattca 2581 agccaaagta gaagcacaaa aacaagttga taatgtaaca atttcaagta caccttttga 2641 tggtgtagtg attacggcaa gcgtgaaagg cacaacttca ttcgattaca tatttcaacg 2701 tggtgacgat gttgtttatc ctgagcatat gggctttaaa gtcagatacg tatctgaatg 2761 taaggcatca ttgactgatg gtaaatcaac ttattatcta acttgttccc cgtaccgttc 2821 accgagcagc cccccacagc cccgtgaggg agatgtgggg gggcgagatg aactaataca 2881 ggaattagca tctaattagt aattaacgca cagcaaggtg cgcacaatgt gaatacatat 2941 tatgtatata aaccccatac ggaagataaa aaacaccgat ggggtttttt tatataatct 3001 gcattgtgcg aatcgttacc cgtacatcat aaataaatta aaaatatctt tgaaaagtgt 3061 atacattaat caaaaagaat gtataatgaa tactgtagac aacaatcaaa gagggtttaa 3121 aaatggcaac tcaatcagac tttaatttcc acctaaatac aaaaagccta ttacatgcag 3181 attacgaggg gataagcttt ttttgggaag ctggagaaga tgcgcttaca atcgaaggtc 3241 gtagctatga cagagcgata tatctaccta aatcaagtgc agctgtggct aaacgcgcaa 3301 tggttaagtt tataggggaa acttttaatg tctgatgtta aaacagagaa tagaggcggt 3361 aagcgtgttg gtgctggtcg cccaaagcaa gaagaaacta aaatgatgcg aattccttca 3421 agtcttgtag atcaagtgaa ggcgttaatt aagcagaaaa aatggcttga ttcgttggat 3481 taggggggta agggggcccc ccccttgcta agcgcacttg aagccttcgc cctgctaagc 3541 gcttttagtg attggttaga ctctacatac agacactgac ggccgaatgg caaaactatg 3601 ctttggtcta cttcttaaaa ggacagtacc tgtaatactg tccttttgtc tcattactga 3661 tactttgacc actcaattac ccccaagctt tttaaatctc tttctagaat atagtggact 3721 atatccgctt ctctgacgat ctccttcgtc gcaattgtta attcaattgc cttctccctt 3781 agcacctcag ccgtttcagg tttgatgcga actgtcgcaa ttagctttgc catttcaatc 3841 accttttttt gatacctcca tcatagtttt attatcacat gttacaagta actcttgaca 3901 tgtaacatat aacaactaac attgcgtaat aatgttattt gtaacttgta accgagatta 3961 ccatgattga ttgggcaaca gttaaaatcg aattagtgca tgagcctatc ccaagtgaca 4021 ggttcatcaa ggttgcatct actggtgaga ttgagtttga aactgtttgc cgttcgcatg 4081 taaggggctc ttatgaatct agtatttctg tgcgttctct tggcagtgac ggtaacggca 4141 atgcgacaat actacaaata gacggcaatc cttcaaagtt catacaaggg cacaacgtat 4201 ttggttcaaa tgactttgtt gcacttgtac ttcatacgtt tatacacgtt accggcttgc 4261 taaatctaac ttacacgcca gatgaatatt ggggcgttta caacggtaag tattcagtaa 4321 gtcgtgtgga cataaacgaa tcgtttgaac ttgaaaactt attaaatgtg cgttcttggc 4381 taaaggccgc ggaactaaaa tcgaaaacaa gacacggaag accgacctca aagggtggca 4441 cagtctattg gggtcaacac tcaagacgct gggcgcttaa agcttattgc aaatacgatg 4501 aaattaattc aggtaaaaaa cataatttac cagaccattt aaaaaaaact gatattgctg 4561 attgggcgca gtctaaattg cgaattgaat tagttcttcg cggtaaacaa cttgaacaag 4621 atggtgtttt tcaaggctct gacctaacca ccgaacgtgt aattgaactg tataacactt 4681 atttgtcgag gcttgaaatg gctaaaaacg tgactctaac ttctaacaag gtaatagatt 4741 tacctcgtaa gcttcaaagc acttatttgc tttggactca aggccatgac cttaaaactt 4801 tattgccaaa gccaacattt tatcgacata gaaaagaatt gatgggacat gacattgaca 4861 taaacatgtc atgcgaccaa ccagaccaat ccaatgtaat accgctttta agagtattgg 4921 aagcaaagcc tgtaggcgta ccaacatggg cgcttgagca aggtctggtc tatcaatggg 4981 aaaaccataa aacacacgtt agctacttaa aaagggtttc ataatggaaa atacacaagg 5041 cttacttatc gcgggtgtac ttcgcggata ccgaccacgc acttataaca acgagataca 5101 aggctatgaa ttaggtatcg caattcaaaa gcctgacggc tttggcggtt tctcggaaga 5161 cgtaaaaata gtgcgagtta gtgaaaatca atctcagcac gttcaaaacg cagcaaatcg 5221 cttgcttggc aatacgattt tagtttcagt ttatgaatct gcttacacga atagaggggg 5281 taaggggatt gctcaactta attatgtacc tgacactcat attattgatt tggacactgg 5341 tgttaatccg tttacgggcg aagttaagac caaagctgct tagctcacta aagcgcttgt 5401 aacccccaac aagcgcaatt aaaagaggtt tttatgatca ctatttcctt ggcttttggt 5461 tgtgtcattt gcttttgcct tggatgggca catggggagt cttggaaatg acgtctgtag 5521 aattttggca agctgtagat tacagcttgt ttgtcgaatt agctggccta tttatcggct 5581 gctatgtact cgggtatggt ttcggatata aattttattt gttccgtcgc tttgctcact 5641 caactgttgg ttagaaggat ttaattatga actctgcaca aaaattacgt ttacaacttg 5701 gcgctactgc tcttgctgtc gctggctctg ttggttctgc tttcgcttct ggtgaggctg 5761 ctgtattcac tgcaatcagt gacaaagtaa ctgaactcga aggttatgca tggcctgtta 5821 ttggtgtggt aactattgca atggtatcta ttactttatt ccgtaagttc gctactaaat 5881 ctgcacgata aggtaatcat t //