LOCUS MH616815 5715 bp DNA circular ENV 05-AUG-2018 DEFINITION Inoviridae sp. isolate ctbf525, complete genome. ACCESSION MH616815 VERSION MH616815.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Inoviridae sp. (animal metagenome) ORGANISM Inoviridae sp. Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 5715) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 5715) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 5.036745x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5715 /organism="Inoviridae sp." /mol_type="genomic DNA" /isolate="ctbf525" /isolation_source="minnow tissue" /db_xref="taxon:2219103" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043871; metagenomic; derived from metagenome: animal metagenome" CDS 1..825 /inference="protein motif:CDD:222771" /codon_start=1 /transl_table=11 /product="assembly protein" /protein_id="AXH73836.1" /translation="MPVWGVTGKTGQGKGLISMALIADYLKKGRVVATNMDIYPENFK DPYNDKIRIIRLPDYPTAQDLIDLGKGAADGVVDEDDFGLLMLDEGATWLNSRDWNSP GRREFNDWLVQRRKYLWNVAIQIQSLESMDAQARRSVISHEMRAVKINTVHVPIVSAV IKELTGQRYPQFPKWFRYHKAKTTNLETEHTEDVTRYRGADLYRLYNTLQTYSANYPH GSFCYLTPWHLKGRYMGPKLGPRFWLRQILRLPVYGAVFLSTLLSRECRQFFNADN" CDS complement(1026..1232) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73835.1" /translation="MRPVITSTGGILRKAQPVGVACLRQEVLAAGRAIRAAKTGLAEE GVSEPHRGPPKTFRRACLRHDTGH" CDS complement(1331..1516) /inference="similar to AA sequence:UniProtKB:Q9RQF7_VIBCL" /codon_start=1 /transl_table=11 /product="repressor" /protein_id="AXH73834.1" /translation="MPTKHIDDATWRKVESETVKAVTTPRAALKDTEVLKILILKGLQ NVTEGDYIEFLKKKKRV" CDS 1643..2779 /inference="protein motif:CDD:282946" /note="Phage X family protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73837.1" /translation="MFFDWLAIEQDFGFQLPLLDGNAYARLVIEEGEVVETGALCSPA FAYKGSFCDLVHLRVNGSSIRMWGNPSRWNRLDNLWGLPTIDTCVAVYNDILRDIYGH CDQIPQFTKCTKVLYAQGSACDHIGTDGAVIRELHITENVSVGAGNTRDYLAGISTLR YRHSAPNPHPNGFTVDWLSKQGNAPLVYPCVYEKANELTLHSLGKIARNFGDDSDEMR HIQNLIGYCNSVGLVRFELKLKNRYLQRNNMQYWGLSDFSPLKQLISDFTNIDQKLSV TSMDFETISERLITLGIVDTTRAANTTAMYALQWMHGQNFDLNKKQVQTHRARLRKLG IDIASKCNISKFSPIFVTARREVKSNIATPPSWYVMPRTLRAVA" CDS 2776..3192 /inference="similar to AA sequence:UniProtKB:A0A023EAY5_AERSA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73830.1" /translation="MKTKHAHIIEAMRLPSVPVVFSKREVEAPTMITSHYGFLGEAMT IKYCKCCHLLITGGSDDYYCHRQSCSDLRAAAERQRQIDEHGKYILQWETFDAQTEIR RFDDEGECYYHASLIREQVADLFVIHPDGSSVEIRQ" CDS 3203..3487 /inference="protein motif:CDD:308106" /codon_start=1 /transl_table=11 /product="helix-destabilizing protein" /protein_id="AXH73838.1" /translation="MKIEIANVSVRNQSGISQRTGKPYSMEKQEAYLHLDGQPYPVKF EFTLAQGATPYQKGFYTITDKTFIVDRFGSLGVSGQLELVPVAVGQRQVA" CDS 3747..3980 /inference="similar to AA sequence:PDB:1IFK_A" /codon_start=1 /transl_table=11 /product="coat protein" /protein_id="AXH73831.1" /translation="MKNFKRNLKYFAVSVPVMLAAGSAHAAIAVPAAFDTTMAELQTA GLALADKVWPYMLAILGAFILLRLGKRFVNKIG" CDS 4063..5385 /inference="similar to AA sequence:UniProtKB:A0A0D8MQP5_PHOAN" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73832.1" /translation="MRRLNFLPVVLILFATSVASMSFSSLIKQAEVIKVNAVTAATNT AITVSTTIKGFAANDPYNIKSLDVPKATFMSHVKGNVGSLVKKNAWYAAWLASMAAAG WAINELTNQVTAPVSTHRGRCTTNYGTLGTNKTVSECNALQASAWAASYGPVTMTSYF TSINGNPVYIYDLKINSTGQVMNRMGYLEALSAFTGTPEPISDNNLYDSLISFMLQDP TKAAQAFMVPDVWPYPYPQIFPDTVPYIPGVSQSDEEALNWYLQGLAQSTNPNAPYYV APERLQQIAALAQQLQQAQSPEGQTEALNENLKSPLTQSQLEETLKKRDATNKKEAEE ISATDKKPITDAYKDSGTKDEFDKLKERVTDPSKLPQLPPLPAVNQIDLPIHTQCRTI TMNMFNGVLTFPNPDQCAKLEQVKTGLGYLLYVLTALGIVFELYRRVE" CDS 5385..5714 /inference="protein motif:PFAM:PF17537.1" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF5455" /protein_id="AXH73833.1" /translation="MGGIGKAIAALLVSLGGSLLNVILDLFKQGAMRRTAAWVTLIAL MGSLFVGINTLLLGFKMLMPTWMEIGMSWIIPQNFTLCITTYIGASVLITLYKWHRRG IQLALGF" ORIGIN 1 atgcctgtct ggggtgtcac agggaaaacg gggcagggca agggccttat ttccatggct 61 ctcattgctg actacctgaa aaagggtagg gtggttgcca ccaacatgga tatttacccc 121 gagaatttca aagacccgta caacgacaag attcgcatta tccggctacc agattatccc 181 accgcccagg accttatcga cctcggcaag ggtgctgcag atggtgtcgt tgatgaggat 241 gattttggct tactgatgct tgatgagggt gccacctggt tgaactctcg cgactggaat 301 tcccctggtc gccgcgagtt caatgactgg cttgttcagc gccggaaata cctctggaac 361 gtggccattc aaatccagag ccttgagtct atggatgccc aagcgaggcg ctcggttatc 421 tctcacgaga tgcgagccgt gaagataaac accgttcacg tccccattgt gagcgccgtt 481 atcaaggagc tcactggtca gcgttatcct cagttcccga agtggttccg ctatcacaag 541 gccaagacta ccaaccttga gactgagcac actgaggatg tgactcgcta ccgtggcgca 601 gacctctaca ggctttacaa cacgctccag acctattccg ctaactatcc ccatggctca 661 ttctgctatc tgactccgtg gcacctcaag ggtcgctaca tgggccccaa gctcgggcct 721 aggttctggc ttcggcagat tcttcgttta ccagtctatg gggcggtgtt cttgtcgaca 781 ttgctgtcca gggagtgtcg gcagttcttt aatgccgata actagcttta tcggcgtcaa 841 atttcctcgt cctgcagcct cacttcttcc acccaggtga ttgcgcataa tgtctggtgg 901 ttatgttgaa gactcggccc cctgctacag tcccgaaggg gcagggggct cccgaaggga 961 tgtttaatat aacccgcatt gtgcgcagtc ctcgttccca tggcgcagcc atacaaggcg 1021 gcccatcaat gcccagtgtc gtgacgtaag caggcccgcc gaaacgtctt tgggggccct 1081 ctgtgaggct ctgacacccc ttcctctgcc aaaccggtct ttgctgcccg gatagcacgt 1141 ccagcagcga gaacttcctg tcgaagacaa gcgacaccca caggctgcgc cttcctcaaa 1201 atccctccgg tcgaagtgat gaccggacgc attttcgagg catgaaaaac cccgccgctg 1261 gggcagggtc tttgggtcgt cggagtccga gggccagtga cacccggact ttaccgtgga 1321 aacccacggt ctacacgcgc ttcttcttct ttagaaactc aatgtagtca ccctcggtca 1381 cgttctgcaa cccttttaaa atcaatatct taaggacttc cgtgtccttt agtgcggccc 1441 tcggtgtggt cacggccttc actgtttcag actcgacctt cctccatgtc gcgtcatcta 1501 tgtgttttgt gggcatctct atcgtcctgc tagtacgtca ccttttcatt ctaacgaatt 1561 tgaatctgag aacttagttt tcttgacata tcagaactta gattccaaga ttaccgcaat 1621 atctaatttc tgagaaaatc agatgttttt cgactggctc gcgatagaac aggacttcgg 1681 gtttcagctc ccacttttgg atgggaacgc ctatgcccgc ttggtgatag aggaggggga 1741 ggttgtggaa actggcgcgc tttgctcacc tgctttcgct tacaagggct ccttctgtga 1801 cctcgtccac cttcgcgtca atggctccag catcaggatg tggggcaacc cgtccaggtg 1861 gaacaggctc gataacctct ggggcctccc gaccattgac acctgcgttg ccgtctacaa 1921 tgacattctt cgcgatattt atggtcactg tgaccaaata ccccagttca ctaaatgcac 1981 gaaggtgtta tatgcccaag gttcagcttg cgaccacatc gggactgacg gtgcggttat 2041 tcgggaatta cacattactg aaaatgtatc tgtgggggct ggcaatactc gcgattacct 2101 cgctggcatt tccactttgc gttatcgcca ctctgctcct aacccccatc ctaacggctt 2161 cacagtagat tggctttcta agcagggtaa tgcgcctctc gtttacccct gtgtttacga 2221 aaaagccaac gaattgacgt tgcattccct cggcaaaatc gcccgcaatt ttggtgatga 2281 ttctgacgaa atgcgccaca ttcaaaacct gattggctat tgcaattccg ttggccttgt 2341 ccgcttcgaa ttaaaactca aaaatagata tttacagcgc aacaacatgc aatattgggg 2401 tctgtccgac ttttcaccgc taaagcaact tatatccgac tttacaaaca ttgaccaaaa 2461 attgagtgtg accagtatgg actttgaaac tatctctgag cgccttataa cgcttggtat 2521 tgtggatact acccgtgccg ctaacactac tgctatgtat gcccttcaat ggatgcatgg 2581 gcagaatttt gacctcaaca aaaagcaggt tcaaacacac cgcgctcgcc ttcgcaagct 2641 cggtattgat attgcctcta agtgcaatat ctcgaaattc agcccgatat tcgttaccgc 2701 tcgtcgcgag gtgaaatcga atatcgccac tccgccgagc tggtacgtta tgccgcgcac 2761 cctgagggct gtagcatgaa aacaaaacac gctcatatca ttgaggccat gcgcctcccg 2821 tctgttcccg ttgttttttc aaagcgtgaa gttgaggccc cgaccatgat tacttcacat 2881 tatggctttc ttggcgaggc catgactatt aaatattgca agtgctgcca cctcctcatt 2941 actggcggct ctgacgatta ttactgccac cgccaatcct gctccgacct tcgcgccgcc 3001 gccgaacgcc aacgccaaat cgatgagcat ggtaaataca ttctccagtg ggaaaccttc 3061 gacgcccaaa cggaaatccg ccgctttgac gatgaagggg agtgttatta ccacgcttca 3121 ttaattcgcg agcaggtcgc cgacctgttc gtaatacacc ctgacggctc ttccgtcgaa 3181 atccgccaat aaggactgca ccatgaaaat cgaaattgct aacgtatctg tccgtaacca 3241 gtctggcatt tcccagcgca ccggaaagcc ctacagcatg gagaaacagg aggcctatct 3301 tcaccttgac ggccagccct atccggtcaa gtttgaattc acccttgccc aaggcgccac 3361 cccctaccag aagggttttt acactattac cgacaagacc tttatcgttg accgtttcgg 3421 ctctctcggt gtttccggcc agctcgagct ggttcccgtt gctgtcggtc aacgccaagt 3481 agcgtaaaag agcggggcca ccatggacgt tatcacccaa tcagatatgg tcgaaatcct 3541 tgactatgca accaaggcgc tgttggccat tttattctgc ttggggtatg tagcggggtc 3601 tccgcgatga ttcatgacta cattcaagga ttgtatgagc agggctttta catatattgc 3661 cttgcctcat tctttagcgg ctacgcgata tccgctctaa taactatcgc aaaacgtatg 3721 tttgaaacca tatagggaaa tacaccatga aaaacttcaa gcgcaacctg aaatacttcg 3781 ccgtatccgt ccccgtaatg ctggccgctg gctccgctca cgctgccata gcggttcctg 3841 cggccttcga taccaccatg gccgagctcc agaccgccgg cctggcactt gccgataagg 3901 tgtggcccta catgctggcc atcctcggcg ccttcatcct gctgcgcctc ggcaaacgct 3961 tcgtcaacaa gattggctaa gcactcggcc gcctaccccc cctcgtgggg gtaggtggcc 4021 gcacctcttc aatcctgttg attacggtaa cggtgactta aaatgagacg cctaaatttc 4081 ctgcctgttg tccttatcct tttcgcaacc tcggttgcct ctatgtcttt ttcaagcctc 4141 atcaaacagg ccgaggtaat taaggtcaac gccgtcaccg ccgccactaa tacagcaata 4201 actgtcagca caacaattaa agggttcgcc gcaaatgacc cttacaacat taagtccctc 4261 gacgttccaa aagctacttt catgtcccat gtaaaaggca acgtgggctc attagttaaa 4321 aaaaatgcat ggtacgccgc ctggctcgcg tctatggctg ctgctggctg ggccatcaat 4381 gaattaacca atcaggtcac ggcccccgtc tctactcaca gggggcgctg cacaactaat 4441 tacggaactc tcggaacaaa taaaaccgtc tccgagtgca atgccttgca agcttctgct 4501 tgggccgcct cttatggccc cgtcaccatg actagctatt tcacctccat aaatggcaac 4561 cctgtttata tatacgactt aaagattaat tccacaggtc aagttatgaa ccgcatgggt 4621 tatcttgagg ctttatctgc ttttactggc actcctgagc ccataagcga caacaattta 4681 tatgattctt taatttcctt tatgcttcaa gaccccacta aagcagctca agcttttatg 4741 gttcctgatg tttggcctta tccatacccc cagatattcc ctgatactgt tccatatatc 4801 ccaggcgttt ctcaatccga tgaggaggcg cttaactggt atttacaagg cctcgcccaa 4861 tcaaccaacc caaacgcgcc ttattatgtt gcccctgagc gcctgcaaca aattgcggct 4921 ctcgctcaac aattacagca agcccaatca ccggaagggc aaactgaggc attgaatgag 4981 aacctcaaaa gcccactcac tcaaagccaa ctcgaagaga cactaaagaa gcgtgacgcc 5041 accaataaaa aagaggccga ggaaatttcc gccaccgaca agaaacccat cactgatgcc 5101 tacaaggatt ccggcaccaa ggatgagttt gataaattaa aggaacgtgt taccgaccca 5161 tccaaattgc cacagctacc acctcttccc gccgttaacc agattgattt gcctattcac 5221 acgcagtgca gaactatcac catgaacatg tttaacggtg ttctcacttt tcccaatcca 5281 gaccaatgtg caaaactgga gcaggttaaa accggtctgg gttatttgct ttacgtccta 5341 accgcacttg gaattgtctt tgaactctat cggagggttg agtaatgggt ggaatcggaa 5401 aggctattgc cgctctactt gtgagccttg gcggctcatt gcttaatgtt atccttgacc 5461 tgttcaagca gggcgccatg cgcagaaccg ctgcctgggt gacacttatc gcactcatgg 5521 gcagcttgtt tgttggcatc aatacactgc ttctagggtt taagatgctc atgccaacct 5581 ggatggaaat cggcatgagt tggattatcc ctcagaattt caccctctgc attaccacct 5641 atattggcgc atctgtgtta attaccctct ataagtggca tcgtcgcgga attcaattgg 5701 cgctggggtt ctaat //