LOCUS MH617362 5295 bp DNA circular ENV 05-AUG-2018 DEFINITION Inoviridae sp. isolate ctbj588, complete genome. ACCESSION MH617362 VERSION MH617362.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Inoviridae sp. (animal metagenome) ORGANISM Inoviridae sp. Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 5295) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 5295) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, United States of America COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 5.828517x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5295 /organism="Inoviridae sp." /mol_type="genomic DNA" /isolate="ctbj588" /isolation_source="minnow tissue" /db_xref="taxon:2219103" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043871; metagenomic; derived from metagenome: animal metagenome" CDS 1..777 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76351.1" /translation="MKKIILSILILSLFPFVTFADVAYIGQASSLSSTYTFNASSTSD YLFVHVVNSTSDDCAVTYAGNELTKIGTGGYLAGSDAYLTLFYLQVPVTGDNDVVISC TDFASSYAVEFSGVTDHYDYTSFTGTDVINSTFFPLQAGDAMITFGSGRYGPHYLTPD VGIDNDFTDVSMNSSFGMSLATSTESSIYVGWSNYDAGVDTTGIIVGLYTGIPPGPTS TVASTTAQDVQVGVMVVFLQLISFALGLILTVWIFKLYII" CDS 1333..2661 /inference="similar to AA sequence:UniProtKB:K2GSW1_9BACT" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76352.1" /translation="MKKIILSIFFLLAFFPNLSSAAVGYSQTVTTASPYGVGYSAPYT LGFYLQIPGTYFSSDFVGETWDTVTVSVSGSGTTTFGAEIRCYTNAGYTTPCSGTAVY TKNVSTGLASMSYVNYVQQINFSGGFVIDPTKYYRVNFYGLNGYTGLNFGANGSLSNP FNCIYYFTTTQACTSSGATYLVLSSSDLSGSSRVTAISSPLANSTVSSPVSFSFTYFN DGSEGYDRAGIELINLTDGSSLYVPSQSITSTGNSSFNASIQVSSDAYYNWRPFLSDG TNFTYGSVYQFQTGTLMTPLPIPDDPNDVGFIQKASEILRNALSFINGTSSSNTTGTT TDSELRSSGNAVVTGATRVTYKFPFSYFYDSLVLLDDLNAGFDSGSTTVVAWDYSYGP ATTSLVIIDRDTIADLSIIVYLRSFLAMALWISWAMAVAFFVIKLLKSIT" CDS 2663..2953 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76353.1" /translation="MNTIAGLGVRVIGIGIFITLLFWIVGIIPEGYGFPTAVHTSFST LGADLALVNFFLPVEEMLVALGLTFVILGAVILIWVAFWSLSIIRRMFLGSD" CDS 2956..3726 /inference="protein motif:PFAM:PF05707.11" /note="Zot Zonular occludens toxin (Zot)" /codon_start=1 /transl_table=11 /product="zonular occludens toxin" /protein_id="AXH76354.1" /translation="MITPKLGFFSPSGFNFRGLKSYLFYGNKGNGKSLVYASIVDSLL SEYRYIERKYPKLPKRVLYSNQNLKLHDSFASDHIRFWSSPRQLASVRNSDILWDEVG KDLPASSWQETPKDIKQIFSHLRKRGNRLFANTQVYDDIDISFRRQIDRTFKTIKFVG SPDISATMPPVAHPWGLIILMEMDKNSLENESDADKQKKSFKFSLPRFCFIERGYIDL YDTTAELPPYRPLELEHLIYKCVVPGCKHENHVEHRKF" CDS 4160..4915 /inference="similar to AA sequence:UniProtKB:A0A0Q0V1D3_BACTU" /codon_start=1 /transl_table=11 /product="replicase" /protein_id="AXH76355.1" /translation="MEYVKESIVISGKYVEHTFYEKNTQKSNRISASRKIQPRFLSEF NHRRANNLSSCKRQFVRYVLSGISTYGPPLFITLTFNQNIYSVRDANYFLRTFFARLR KANMASSYLFVPEFQKSGRVHYHGFLWGFDQSYGDCYKGKNLIQIGKERSTRYFADLW KEGFVDVRITDGDKRLVYYLAKYFVKAYDDKRLSGVRLFYRSRNIPKPFKYSGSMVDQ LVDLPTTNATFESSSEFNSKWFGKVVKINYIKL" CDS 4912..5169 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76356.1" /translation="MKIILLQKLGIVSKKDNKPYVVFKGVSRSGEIVEFILNETDAEK FSIPNTAVLSTEILTAMFQDPSIRTLDVEFNNRGRVEKVTV" ORIGIN 1 atgaaaaaaa taatcttatc aattttaatt ttatctttat ttccttttgt tacttttgct 61 gacgttgcat atattggtca agcttcgtca ctttcttcta catatacttt taatgcttct 121 tctacttccg attatttgtt tgtccatgtt gtaaattcaa cttcagacga ttgtgctgtc 181 acttatgctg gtaatgaact tacaaaaatt ggtactgggg gttatctagc tggttctgat 241 gcttacttaa cacttttcta tcttcaagta cctgtgactg gtgacaatga tgttgttatc 301 tcttgtacag attttgcttc atcttatgct gtagagtttt ctggggtgac tgatcattac 361 gattatacat ctttcactgg tactgatgtt attaattcaa cattttttcc tctacaagct 421 ggtgacgcta tgatcacttt tggttctggt agatatggcc cacactatct tactcctgat 481 gttggtattg ataatgattt tactgatgtc tcaatgaatt ccagtttcgg tatgtctctt 541 gcaacttcta ctgagtctag tatctatgtc ggttggtcaa attatgacgc tggtgtagat 601 actactggta ttattgtggg tttgtatact ggcattcctc ctggccctac ttctactgtt 661 gctagtacta ctgcacaaga tgtacaggtc ggtgttatgg ttgtatttct tcaattgatt 721 agttttgctt taggccttat actcactgta tggatattca agctctatat tatctagttc 781 ctgtttcctt tgcatattat gctatgctct ttcttccatg ggctatggct ttagcattgt 841 ctactctttt ttgggttata aacaaagaat aatatgacat atgaacttgc agaatttttg 901 atcttctcaa ctgcctcgtc ttttggtctg gggataactt tgggtttgct catttctgtc 961 actatgatat tcttaagacg taggagaggt ggtgcgtact cgtaatcatt ttctctaagt 1021 cggaaattag ggcccgtgcc taatctccta tttagtcgct aaatgatttt catggacgct 1081 atgcaaacgt atattgctac ttctactgca tttgcaggga ctgtagctca ggcatacttc 1141 aatggattct tcagcctcct tctgactatt cttccttttg caatcggtat tttgattttc 1201 tatatcggtt acaactgggc acgaaaagca cttggcggtc gttaatctag tgtagttatt 1261 gtactgctga tcttgtcagg tactttccct aataaagata tcaacattat cggcggtact 1321 attaaataca ttatgaaaaa aataattcta tcaatttttt ttcttttagc ttttttccct 1381 aaccttagtt ctgcagcagt tggttattct caaactgtaa ctactgcttc tccatatggt 1441 gttggttatt ctgcaccata tacgttaggt ttttatttac aaattccagg tacatatttt 1501 tcttcagatt ttgtaggtga aacttgggac actgttacag tttctgtttc tggttctggt 1561 actacaactt ttggtgctga gattcgttgt tatacaaatg ctggttatac tactccttgt 1621 tctggtactg ctgtttatac taaaaatgta agtactggcc ttgcttcgat gagttatgtc 1681 aattatgtac agcaaatcaa tttttctgga ggttttgtta ttgatccaac taaatattat 1741 cgtgtaaatt tttatggttt aaatggttat actggattaa attttggtgc gaatggctct 1801 ctttctaacc catttaattg tatatattat tttactacca cacaggcttg tacttcttca 1861 ggtgctactt atttagtgct ttcatcttct gatttgtctg gttcttctcg tgtaactgca 1921 atttcttcgc ctcttgcaaa ttcaactgtt agttctcctg tttcattttc atttacatat 1981 tttaatgatg gttctgaagg gtatgatcgt gctggaattg aacttattaa tcttaccgac 2041 ggtagttctt tgtatgttcc ttcccagtct ataacttcaa ctggtaattc ttcttttaat 2101 gcttctattc aagtttcttc cgatgcgtat tacaactggc gtcctttttt gtctgatggt 2161 actaatttta cttatggatc cgtttaccaa tttcaaacag gtactttaat gactcctttg 2221 cctattcctg atgatcctaa tgatgtcggg tttattcaaa aggctagcga gattcttcgt 2281 aatgcgttat catttataaa tggaacgtca tcaagtaaca ccactggaac aactacagat 2341 tctgaactca ggtcctcagg aaatgcagtt gtcacaggtg ctacaagagt cacctataaa 2401 ttccccttct cttatttcta cgactccttg gtattattgg atgatcttaa tgctggtttt 2461 gattctggct ctacgactgt tgtggcttgg gattattcgt atgggcccgc tactacttct 2521 cttgttatta ttgataggga cactattgct gatttatcta taattgtata tttgaggtct 2581 ttccttgcca tggcactgtg gatatcttgg gctatggctg ttgccttctt tgttattaaa 2641 ttgctaaaat caattacata gtatgaatac tattgctggt cttggtgttc gtgtcattgg 2701 tattggtatt tttattacct tattgttttg gattgtaggt attattcctg agggttatgg 2761 ctttccaact gctgtacata cttctttttc tactctcggt gctgatttgg ctcttgttaa 2821 cttttttctt cctgtagaag aaatgcttgt cgctcttggt ttaacatttg ttattcttgg 2881 tgctgttatt cttatttggg ttgcattctg gtcattgtct attattcgtc gtatgttctt 2941 gggttctgat taattatgat aacgccgaaa ttagggttct tctcaccatc aggttttaat 3001 tttagaggac ttaaatcata tttattttat ggaaataaag ggaatggtaa atcgcttgtt 3061 tatgcctcca tagtggactc tctattgtct gagtatcggt atattgaacg taaatatcca 3121 aaattaccaa aacgagttct ttattcaaat caaaatttaa agttacatga ttcatttgct 3181 tctgatcata ttaggttttg gagttctcca cgtcagttgg cttctgtcag gaatagtgac 3241 atattatggg acgaagtcgg gaaagattta cctgctagtt cgtggcaaga gacgccaaaa 3301 gatattaaac aaatattctc acatctacga aaacgcggaa atcgattgtt cgccaatact 3361 caagtatatg atgatatcga tatatcattc aggagacaga tcgacagaac atttaaaact 3421 attaaatttg tcggttctcc agatatatca gctactatgc cgcctgttgc tcatccttgg 3481 ggtctcatta ttctcatgga gatggataaa aattcacttg aaaatgaatc agacgccgat 3541 aaacagaaaa agtcatttaa gtttagtctc ccacggtttt gcttcattga acgaggatat 3601 attgatctat acgataccac agcagaactt cctccgtata gaccccttga acttgaacac 3661 ttaatttata aatgcgttgt accaggttgt aaacacgaaa atcatgtcga acatagaaaa 3721 ttttagtttt aaaagagttg tactttctgt ttcaattatt gtttttcttt ttttttcttt 3781 ccttattatt ggtttagtat tgtatattat ttatgattta cttagaccta tcttgtatta 3841 ttgggaatat ctattttggt tttctttatt taatttttct ttcttaggta tttatctaaa 3901 tattgatgat tttgataaaa atatataaac ctaactaata cattccttat tatcgtttat 3961 ttctattttc ttttattttt aatttgtatt acgaacaatt agatcaacgt cagaacacgc 4021 cgtaggcgtg gaggacgttg ccttataggg ccaggggcac aaaaggctgc ttaccacttc 4081 aaggtgtatt ctcaggttcg atgtgctttg taggtggtgc gtagcattag acttgatata 4141 tgactaacaa ttgcaataca tggaatatgt caaagagtca atagttatta gtggaaaata 4201 tgtagaacat acattttatg aaaaaaatac ccaaaagagt aaccgtatat cagcttccag 4261 aaaaatacag cctaggtttc tctctgagtt taaccacagg cgagcgaata atctttcttc 4321 ctgcaaacgg caatttgtgc gctatgtgtt gtcaggaatt agtacgtatg ggccgccttt 4381 attcatcact ctcacattta accaaaatat atactctgtc cgcgatgcaa attatttcct 4441 cagaacattt tttgcacggt tgcgcaaagc aaacatggcg tcatcctact tatttgttcc 4501 cgaatttcaa aaatccggaa gagtgcatta tcacggtttc ttgtggggct ttgatcaatc 4561 ctatggagat tgttacaaag gaaaaaatct cattcagatt ggaaaagaac gttccacacg 4621 atattttgcg gatttatgga aagaagggtt tgttgacgtt cggattacag atggggataa 4681 acgcctagtt tactatcttg ccaaatattt tgttaaagct tatgatgata aaaggctctc 4741 aggtgttcgt ttattttata ggtctaggaa tattccaaaa ccttttaaat attcaggttc 4801 gatggtagat caattggtcg atttgcctac cactaacgct acttttgagt catcttccga 4861 atttaattct aaatggtttg gaaaagttgt taaaattaat tacattaaac tatgaaaata 4921 attctgcttc aaaaacttgg tattgtgtct aagaaggata ataaacctta cgttgtattt 4981 aagggtgtat cccgttctgg tgaaattgta gagtttatcc ttaatgaaac tgacgctgaa 5041 aaattctcta ttcctaacac tgctgtactc tccaccgaaa tcctcacagc tatgttccaa 5101 gacccttcca tccgcaccct tgatgtcgaa ttcaataatc ggggacgtgt cgaaaaagta 5161 actgtctaat tgtattctct taggaggcct tcattaataa attggtattg tggattactg 5221 gcccacaaag gccaagttat ccacaatcaa accaatttaa tattgcaggc ctctaataaa 5281 aaatataatt tgcat //