LOCUS MH617040 7769 bp DNA circular ENV 05-AUG-2018 DEFINITION Inoviridae sp. isolate ctce6, complete genome. ACCESSION MH617040 VERSION MH617040.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN07319269 Sequence Read Archive: SRR5832142 KEYWORDS ENV. SOURCE Inoviridae sp. (animal metagenome) ORGANISM Inoviridae sp. Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 7769) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 7769) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 6.84464x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..7769 /organism="Inoviridae sp." /mol_type="genomic DNA" /isolate="ctce6" /isolation_source="haddock tissue" /db_xref="taxon:2219103" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX3009445; metagenomic; derived from metagenome: animal metagenome" CDS 1..279 /inference="similar to AA sequence:UniProtKB:Q9MBV0_9VIRU" /codon_start=1 /transl_table=11 /product="RstR" /protein_id="AXH74873.1" /translation="MQADLRQVRQDVVLCMETKTQVEAYMAPKSTSLRVSEERKMALE RAAIEISYKTGVSIKWTELANHLFDKWLSEAKKDLIGSTDIKKVMKKD" CDS complement(741..1058) /inference="similar to AA sequence:UniProtKB:J4VWL8_9FUSO" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH74875.1" /translation="MSKLNHGGVRPGAGRPKSEDTKMMRIPLGAEPLVRHLISVYKKY HVDAIADTLARASSLPELESEAVLLQLGDYKFMNGRKLRQHYMNRDGVIVERMEQQGE LPV" CDS complement(2231..3547) /inference="protein motif:CDD:283385" /note="Zonular occludens toxin (Zot)" /codon_start=1 /transl_table=11 /product="zonular occludens toxin" /protein_id="AXH74879.1" /translation="MLGLCTGKPGASKSLNSLASIVSKNQGDRPIYYTNIRLLMLDYR VASSFSGWFYGNYLPKLKNKAAIKRLNKIIKRVHADDEFVTLSDVPWLESYFEAANPL ETWLLWVRKLYTKKQLARMEEFISNMPAETLDISHLIQFNLHFIHFDNPRDWHLLPKG SIVLIDECQQFFPPRAVGAPVPLHISKFETHRHDGFDIYLITQDRMLLDSNVRRLVNN HVHYHNAFNSNRVTRYELSKSFDADDYHQVKTTQKSLIKRPTNFYGAYFSSELHTHKF KMPKVFYILIFLILLVAGSIYSFASSMLTSDTVVAAPKAAIPSLTSSSITSNKVSIKS SKSPLLNDNEKKYLTDYVSKTVDGVFITGSQYIKTSAGLDKYDYSFSKSTTDQIFDPY SVGFVVLPINQCLVRLTFNDFTTFITCDPFHKLEPLNNESSQLAAS" CDS complement(3547..3894) /inference="protein motif:CDD:313853" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF2523" /protein_id="AXH74878.1" /translation="MQFLPLFLASIFPFLAQFLTASVARVAIALGFGTVSYAGVGFIF DTIIAKLNSSSLLLMPHVATFIHLMGIDTAMNIAMSAGATLMVMKGVSKSGYSRQMVW RKPGDKSPVDWSA" CDS complement(3903..5423) /inference="similar to AA sequence:UniProtKB:A0A0D1FVG3_VIBPH" /note="Whole genome shotgun sequence" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH74874.1" /translation="MAISSVCLARLRSAHILLTLPLLSSLFAVSTAYAAYTPPETPDV PLYFEFTGLNAEAEADEFRTSQCDSNLFSWYSTGQICAVGDPTNPTCSVWMAYHATDV NQCKGYELPEQPTPLLEPDVLTENGGNNQNLINKLELMRIQDFNKNFSDGQYQGKDIS LTRQTNSLLSSLSRSLQYSNDNRSVVDAINTWGSSHMIETQKQYLENTLYRNKQDAEN KVLFGEEMGLLGRKLNYMHDTLIGIENKTGSGGTGSGNDGDYMPALNYIANSIGNLSS LSTIANNTSSIPAINNILSGSINSNIEKIATEIAKPVDNSLIVDQLIEANDGLTDIVI RMRDIESAIGKSEKGIVDAIIENGSGGDGTDPDIVSESGCTAFSCSTDSPECYIARKA WERSCAIANNDTDGQGVVDSLVSSLKDYNDSPDSDINNIDAGTVDTSALMNKYTDANG VNFGGSDTCPPPYFVDAGITSFTLDLKPFCDLAGVIRVLLIAFATIASGLMVVKYF" CDS complement(5934..6308) /inference="protein motif:CDD:284799" /note="CTX phage RstB protein" /codon_start=1 /transl_table=11 /product="RstB protein" /protein_id="AXH74877.1" /translation="MKKVIFILGVEAAKGVGKTSGKPYEFGKIHNLTPVRNWETEKGR SSSKGFTVDAEKCVTCHINALPELLRLEYPCFAEVEIDIDPEDMSSTIIVGAAMVQHF DLQNPPITGDSPAKASYSAKQV" CDS complement(6313..7497) /inference="protein motif:CDD:164786" /codon_start=1 /transl_table=11 /product="DNA replication initiation protein" /protein_id="AXH74876.1" /translation="MQASNLLNRFWLTDRFGNLCQSKPLNPDSVVYSQDDSKAKFFRG TRTPLLPCFADKSITYAQRLGQIGFDHLAFTIRLNKFEKLPCDAWVKLPVYKSYTDDT AGLEAFQEHVVMVRHLRLEQFVNRVLGLKLGSTRNYGRFFYTQSRELMDKKGKVSVGF IAFGGNDDTVYFQISGTGCKHVFTHTNGHRLHHWLSYFDVKVLRRADLFYDDFDGNFD CDYARLAYRDGAFKRNNGGRNPKISETVDRDDTGVLGEIVRVGSRTSLVYWRIYDKGR EQGVDSPWYRTEVELKDISIDVLLAPAKHFAGLCPFSESINLSDKHALSTVFKHKKSA MLTLEAKTKWLRRQCGRAIYDLVEDWKLSAEETLIALVGNNPKHGGKLSAPEYYSDII RF" ORIGIN 1 atgcaagcag atttgcgtca agtgcgacaa gatgtcgtat tatgcatgga gacgaaaaca 61 caagtagagg catacatggc acccaaaagc acatcactac gggtatctga agaacgtaaa 121 atggcgctgg aacgggcagc catagagata agttataaaa ctggcgtatc cattaaatgg 181 acagagctgg ctaaccatct ttttgataag tggttatccg aagctaagaa ggatctcatt 241 ggctccacgg atatcaaaaa agtaatgaaa aaagactgac cctgcgaacg aatccagcaa 301 atgtgtgtaa gttaaccccc gtaagacagt acgggggttt tttacatgcg gaaatcccta 361 aagcgaaaag caaagaacta acgcgctgcg cttgttagca acaggcactc actgcgcaac 421 aagttgcttg ctcgacctga tgcgggattg ataggcgggt gttttttggg ttattttttt 481 ggaataggtg caaaaagcgg cttagcagca aggtggtggt gttcatgtgc ggagtagaga 541 gcaacagaaa agcggttcag tgtgtggtgc cagtgcggag tagaaagcaa caaaaagcgg 601 ttcagtgtgt ggtgccagtg cagagtagag agcaacagaa aagcggttca gtgtgcggtg 661 ccagtgcgga gtagaaagca acaaaaagcg gttcagtgtg gcacccccaa aaagcaaaga 721 gagtgcgcaa cacccaccac ctaaacaggt aattccccct gctgttccat ccgttcaaca 781 ataacaccat cgcgattcat atagtgctga cgaagcttgc gaccattcat aaacttataa 841 tcacctaact gcaaaagaac tgcctcactc tcaagctcag ggagagatga agccctagcc 901 aacgtgtctg caatagcatc aacatgatat tttttgtaaa cagaaatcaa atgcctaacc 961 aaaggttcag cacccaaagg aatgcgcatc atttttgtat cttccgattt aggacgcccc 1021 gcacctggac gaacaccacc atgattaagc ttagacattg aaagttgccc ccaaccaaaa 1081 acagatctct ttacgaacta aagcaggcgt agcgttatca gggacataga tattcaaacc 1141 atgttcaggt gtgataagta tatgatttga accacgttcc caataaaatt caaagttgtc 1201 atcccaagta caccacacac aatttttagt attttcttta aagttcagtt cagattgttt 1261 catgataatt cctcttgatt tttgtataca gtaatcatag cacaatcttg attaatgtaa 1321 acaagtttct agagaaaaag tgatttattt tcaatatatt tttaaggaga aaaatggaat 1381 agataaaatg gttgaaccat taaatagaat taaccgcgca caatgaggat tatattaaag 1441 tcattcgatg aatgtcccct gctgcgtacg catttttgca ggggcaacac ttaaacatga 1501 atcctagtta cattgtgcgc agttttaatt tacttagacc tatgataaag aaaatcataa 1561 attccagcat aaaacataca aagcaaacca ccaaaaaaca taataccaag gcattgaaga 1621 acctcaaaga acgaaggcat agtaaacata agtaatcctt attaaacgca attaagggca 1681 aacaataatt tcgtctaaat gtttaaaaac atcaagccaa aagaaatcag taacaaacat 1741 acctagaact atcccgaaca aaaggcaaat tgaaggatta aaaaaatgat ggataacaga 1801 ttgttgaagc ttttgatagt tagacataaa caaacctcat aaaacataaa agataaagca 1861 atcaaacagc tttcttcatt ttaccagttg tgagtgagcg agccataaaa gggacaaaat 1921 cgcggttatg acaaagaaag tcagccatag atttaaattc aatttcagac tcaataggaa 1981 cccaaagagt taatttcttt agaccattag aacgttgttt taattcatat ttagaattgc 2041 gtgtcatagt gtcaccagtg actatagcta gaaattgatt ataaggtaat agtaagaata 2101 gataaaccag aaaagaaaaa gaaaaagaga aagagaaaga gaaagaaaat tatatctgac 2161 acgcaaaagc gttagtcaga aaataataag taattggagg ggggcgcttc gcctgccccc 2221 ctcctcctct ctagctggct gcaagctgag atgattcatt atttaaaggt tcaagtttat 2281 gaaaagggtc acaagtaatg aaagtcgtaa aatcgttaaa agttaatcta acaaggcact 2341 gattaatggg tagaactacg aagccaacag aataaggatc gaaaatttgg tctgttgtag 2401 atttagagaa tgaataatca tatttatcaa ggccagcact ggttttaata tactgggaac 2461 cagttataaa aacaccatca acagttttag agacataatc agttaaatac tttttttcat 2521 tgtcattcaa tagtggcgac ttggaggact taatagaaac tttgttagat gtaattgatg 2581 aagaagtgag agaagggatt gccgctttag gtgcagcaac aacagtgtca ctggttaaca 2641 tagaggatgc aaaggaataa atagaacccg ccaccaataa tattaaaaat attaatatgt 2701 aaaatacttt aggcatctta aatttgtgag tatgtaactc agagctaaaa taagcgccat 2761 aaaaattagt aggccgttta attaaggact tttgagtagt tttaacttga tgataatcgt 2821 cagcatcaaa gctttttgaa agctcataac gagtaacgcg attgctgtta aaagcgttgt 2881 gataatgaac gtgattgtta accaatcgcc taacgttact atctaataac attctatctt 2941 gagttattaa ataaatatca aaaccatcgt gtctgtgagt ttcgaattta gaaatatgca 3001 aaggaacggg agcgccaaca gcccttggag ggaaaaattg ctgacactca tcaattaaaa 3061 cgatgctgcc ctttggcaac aaatgccaat ctctagggtt atcaaaatga atgaaatgta 3121 agttaaattg aattaaatgg ctaatatcta gcgtttccgc tggcatatta ctaataaatt 3181 cttccattct tgcaagttgt ttttttgtat ataacttgcg aacccacagc aaccaagttt 3241 ctaaagggtt agcggcctca aagtaactct caagccaagg aacatcagac aaggtaacaa 3301 actcatcatc agcgtggaca cgcttaataa tcttgtttaa acgcttgata gcggctttat 3361 tctttaactt agggagataa ttaccgtaaa accagcctga aaagctacta gcaacgcgat 3421 aatctaacat tagaagtctt atgttagtgt aataaatcgg cctgtcacct tgattcttag 3481 agacaatgct agccaatgaa ttaagggact tagaggcgcc cggcttacct gtgcaaagac 3541 ctaacattag gcagaccaat caacaggtga tttatcgcct ggcttgcgcc aaaccatctg 3601 tctggaatag ccacttttag aaaccccttt cataaccata agagttgcgc cagcagacat 3661 agcaatgttc atcgcggtat caatacccat caaatgaata aaagtagcaa cgtgtggcat 3721 taacaataaa gaggaagaat taagcttggc aataatggtg tcaaaaataa agcctacacc 3781 cgcataggac accgttccga agccgagagc tatagcaacg cgagcgactg aggcagttaa 3841 gaattgtgca agaaatggaa aaattgacgc tagaaaaagt ggtaaaaatt gcataaatcc 3901 ccctagaagt atttaacaac cattaaaccc gatgcaatgg tggcaaatgc tatcaataaa 3961 acacgaatga cacctgcaag gtcacagaat ggctttaaat ccaaagtgaa gctagtaatg 4021 ccagcatcaa caaaatatgg cggcgggcaa gtgtcagaac ctccaaaatt aacaccgtta 4081 gcatcagtgt atttattcat taatgcggaa gtgtcaacgg tgccagcatc aatgttatta 4141 atgtctgaat cgggcgaatc attataatct tttagacttg aaactaatga atcaacaacc 4201 ccttgcccat cagtatcatt atttgcaatg gcacaggaac gttcccacgc cttacgagct 4261 atataacatt ctgggctgtc agtggaacac gaaaaagctg tgcaacccga ttctgaaact 4321 atatctgggt cggtgccatc accgcccgaa ccattttcaa taatagcgtc aacaattccc 4381 ttttcagatt taccgattgc gctttcaata tcacgcatac ggataacaat atcagtaaga 4441 ccatcattag cctcaataag ctggtcaaca attaaagaat tatcaacagg cttggcaatt 4501 tcagtagcta tcttttcaat attgctatta attgaacctg acaaaatatt attaatagca 4561 ggaatcgaag aagtattatt agcaatagta gataaagaac ttaagttgcc aatagagtta 4621 gcaatataat ttaatgctgg catgtaatca ccatcattcc ctgaaccagt accgccgctg 4681 ccagtcttat tttcaatgcc aattaacgta tcgtgcatat aattaagttt tcgacctaaa 4741 agacccattt cttctccaaa aagaacttta ttttctgcat cttgcttatt tctatataaa 4801 gtattttcta aatattgctt ttgggtttca atcatgtgcg atgaacccca agtattaatc 4861 gcatcaacga cagaacgatt atcgttagaa tactgcaaag aacggcttaa acttgaaagc 4921 aaggaatttg tttggcgagt cagtgaaata tctttacctt gatattgacc atcagaaaag 4981 tttttattga aatcttgaat acgcattaat tcaagtttat taattagatt ctggttatta 5041 ccaccgttct cagttaaaac atcaggctca agaagcggag tgggctgttc tggaagttca 5101 taacccttac actggtttac atcggtagca tgataagcca tccaaacaga gcatgttgga 5161 ttagtcggat caccaacagc acaaatttga cctgtgctat accaagaaaa aagattcgaa 5221 tcacactgag aggtgcggaa ctcatcagcc tcagcctcag cattgagacc agtaaattca 5281 aaatataaag gaacatcagg agtttcaggc ggtgtatatg cagcataagc tgtcgacaca 5341 gcaaaaaggg aactcagcaa aggcagagtt aaaagaatat gcgccgaacg caatctagca 5401 agacacacag aactaatagc catattaaat ccattgtagt tattagcata aaacctcaag 5461 gaggggcgaa cccctcacgg tgaaaaacta ctgttagccg aaaatggcag ccttagccca 5521 cttgaaaaca atagcaatgg cagacaagcc aagcattgca ccaccgattt cagtaattgc 5581 agcactacca tcagtagaaa tggcagttgt agctggtgat acatcaatcg cagcgaacgc 5641 aggaccagcg aacgcagcac ccagagtgat ggcaacaatt aaagctgttt ttgttttaga 5701 catgatgtta ttcctttaaa agccgattag acggcgtgct aatttaaaaa caaaggttaa 5761 ggcgtagagt gacgccccag cactaaacaa aatcccgacc tcagtcgctg ataacgtgcc 5821 ttgcaagtct tgagtctcaa ccatgtaata accttcacac ggtcgcgttg tgctgactac 5881 aagcgattgg tctgactgtt gaacaacgca taaggccatg attttggatt cctttaaacc 5941 tgcttagcgg agtaactagc tttagcaggt gaatcgccag taataggcgg gttttgcaaa 6001 tcaaaatgct gaaccatagc ggcacccaca ataatcgtgc tagacatatc ctctgggtca 6061 atgtcaattt caacctcagc aaaacatggg tactcaagac gcaacaattc aggtaaggcg 6121 ttaatatggc aagtaacaca cttttcagcg tcaacagtga aacctttgga agaagaacga 6181 cccttttcgg tttcccagtt tcgaaccggt gttaaattgt gaattttgcc aaattcgtaa 6241 ggtttgccag atgttttgcc tacacccttg gcagcttcaa cgcctaaaat aaagataact 6301 tttttcatat aatcagaacc ttataatgtc ggagtaatat tcgggagctg ataatttgcc 6361 cccgtgttta gggttattgc ccaccagtgc aataagagtt tcctcagccg aaagtttcca 6421 atcttcgact aagtcataaa tcgcgcggcc acactgacgc ctgagccatt ttgttttagc 6481 ctcaagtgtg agcattgcgg attttttgtg tttaaaaaca gttgataagg catgcttatc 6541 agataaattg atagattcag agaacgggca taaacccgca aaatgcttgg ctggagctaa 6601 gagaacatct atagatatgt cctttaattc aacctcagtt ctgtaccatg gggaatcaac 6661 gccctgttcg cggcctttat catatatacg ccagtaaaca agcgaagtgc gcgacccaac 6721 acgaacaatt tcgcccaaaa caccagtatc atcacggtca acagtctcgg aaattttagg 6781 gtttctgccc ccattattcc gcttaaaagc gccgtcccta taggctaatc gggcataatc 6841 gcaatcaaaa ttaccatcaa aatcatcata aaaaaggtca gcgcggcgta aaaccttcac 6901 atcaaagtaa gatagccaat ggtgtaatct gtgaccgtta gtgtgtgtaa atacgtgctt 6961 gcaacctgtc cctgaaatct ggaaataaac agtgtcatca ttgccaccaa aggcaataaa 7021 accaacggaa accttgcctt ttttgtccat caattcacgc gattgtgtgt aaaagaaacg 7081 cccatagttg cgcgtggagc cgagttttaa acctaaaacg cggtttacaa attgctccaa 7141 acgtaagtga cgcaccataa caacgtgttc ctgaaaagct tctaggccag cagtgtcatc 7201 ggtgtaagac ttgtacacag gcaatttaac ccatgcgtca caaggaagtt tttcgaactt 7261 atttaagcgg atagtgaacg ctagatggtc aaagccaatc tgacctaagc gctgagcgta 7321 agtaatggac ttatcagcaa aacatgggag taatggggtt cgggttcccc taaagaattt 7381 agctttagag tcatcctgag aataaacgac actatcaggg ttcagtggct tagattggca 7441 tagattgcca aatctatctg tcagccaaaa acgattcagc agattagagg cttgcatgaa 7501 acacctctag cgccttcatg gcctgttcat ctaaatcagc catatcaaca attttataat 7561 cagtgccaaa gtgatgcact aaatccaacc gcatagcagc ctgagactta aaccattgct 7621 cgccccagaa cgacgacagc gtcaggaatc ccatccctag ctcggtcata tcctgaaagt 7681 aaagtacggc tatctttgtc atccctgccc tattttgcat atctgcatac acgaagattt 7741 gggaacaata tagacccgtg ttaattcgg //