LOCUS MH552537 5568 bp DNA circular ENV 28-JUL-2018 DEFINITION Inoviridae sp. isolate ctci486, complete genome. ACCESSION MH552537 VERSION MH552537.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074553 Sequence Read Archive: SRR7122376 KEYWORDS ENV. SOURCE Inoviridae sp. (animal metagenome) ORGANISM Inoviridae sp. Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 5568) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 5568) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (28-JUN-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 4141.420259x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5568 /organism="Inoviridae sp." /mol_type="genomic DNA" /isolate="ctci486" /isolation_source="mouse tissue" /db_xref="taxon:2219103" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="closest relative: cellular organisms; Bacteria; Terrabacteria group; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma gi|429221941|ref|YP_007183019.1|plasmid-replication- initiation-protein-(plasmid)-[Mycoplasma-cottewii]; genome binned from sequencing reads available in SRX4043870; metagenomic; derived from metagenome: animal metagenome" CDS 1..249 /inference="similar to AA sequence:UniProtKB:L9Z5W7_9EURY" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52632.1" /translation="MDFMALLTQMIQILVGGITGVAKGIGEGLSTLVTNIFMDTSGDT AVLSVFGGLILCFAGISLAIGLGRWVVNFVTSLGSRNR" CDS 314..1168 /inference="protein motif:PFAM:PF05707.11" /note="zonular occludens toxin (Zot)" /codon_start=1 /transl_table=11 /product="zonular occludens toxin" /protein_id="AXF52633.1" /translation="MTLLILIVIAIALFIILRKCKLPKIGSLACFTGGVKTGKSAVSL HFAIRTYKRIRFSWHIKCFFCKIFRKEKPEEPLFYSNIPLRKIKYVPLTRDHLLRKVR LNWGSVAFLDEVALVADSQLIRNGEINFQLLLFTKLFGHSCGGLLIFNSQQITDLHYA FKRCTSQYFYIHHTTKLPFIRLSYLREERYSEDGTTINSYDKDVEDSLKRIVYFSSIY KKYDAYCYSVLTDHLPTKNEIKYNGKHDSLKTTNIVSFRKEYTDLFVSGKSEIDKVMS EVSTNAQT" CDS 1155..1508 /inference="similar to AA sequence:UniProtKB:G7K5M0_MEDTR" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52634.1" /translation="MRKRNCNHLFDCIFWYTIYLLPVILMIVYYFKGSATPITAIGDF CQELGINFAENPLFSGIYGIFGADGIFPLLTSSAPLYPVVWFLSMVLIHLAVDVLLFI PRLCHQWIESFKSKM" CDS 1519..2577 /inference="protein motif:CDD:237372" /note="flagellar assembly protein H; Provisional" /codon_start=1 /transl_table=11 /product="putative flagellar assembly protein H" /protein_id="AXF52638.1" /translation="MQNFDEKSYNRRELRYNIAMFVLCISFAVFLLGFFFLTSYFDKK QSYLNAKTNTQSILCSSRDVVADDSQYTYTSPITYGSALYGIAPNYNSGSISLAFVIQ FRYQNNVCYVSTSNTIFYAISSSTSYRPSSVFSVTGADSYTNNEFTAGTEKDVIVLYS FIGLNGYLRVVYHFSPLPYIGSTYQLNTITTTVDLGSTTYSYQTFDSGSLSPTFLSVS YSITPISSLSHPSTTIRYTDLALELMRTGEYSDGYNNGYYLGYQEGQQSGFDSGYSQG NSAGLNTGYHQGYNKGVLESNNYSFLGLIGAVFDAPIQAFNGLFDFEILGVNMKQFAL TLLTFCFIITVVRLVKGG" CDS 2580..2975 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52635.1" /translation="MAKTYDGHHYTFRNGAVVFGPSRDTAKKTAFTIFKLIFLLMIVF SIVKILVGRDPITFSGLLSTLSNAPTFSTDWIKYVQTNFSETFPWGFQWLGSIVDFFT DLLSVSLFVSVGAANVITFILYFMRYLFF" CDS 3061..3612 /inference="protein motif:CDD:307714" /codon_start=1 /transl_table=11 /product="replication protein" /protein_id="AXF52639.1" /translation="MKPKSNYRSRHWSLTTYSTPQEFSPLLSLCSEYSYIYHNKEESE PHYHILCIFKNAKTFTAVRSYIQGSQNTFGEPARDLNALYRYLTHKDNPDKHQYEDTE IIASNPFYWLQIANQESFAKDGEKALNLLEDINAKKSYRYMVLTYGRDYIKNHVVYEE MAFKLFIQEQDEEKNKQQIYDIF" CDS complement(4060..4326) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52637.1" /translation="MQIKTFFRIKEQMRGLVELKIKVDFTEDCMDHVEFESNEEFEKF IKENFNDEINAINSAIVFSTKNGKFLQMIILGNVMTYKCEIMGE" CDS complement(4361..4768) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52636.1" /translation="MANLVKGATRQGGGGVLTETECFCHGEQQSNRRGLSTANECNCL KQLSIAVKFAYCGAATNFYFRPKRLIFMANYIVVLNRATQIIKGQWEGRFPLENKHCR NNLSGVFKGTKNLNKKICCTIDRHIDMWYTISK" ORIGIN 1 atggatttta tggcgctttt gactcagatg attcaaattc tcgtcggcgg cataactggc 61 gttgcaaaag gtataggtga aggtcttagc actcttgtta ctaatatctt catggacaca 121 agcggcgata ctgctgttct tagcgtattc ggcggattga ttctttgctt cgctggcatt 181 agtttggcta ttggtctcgg tcgttgggtt gtaaattttg ttacttccct tggctcgcgc 241 aatcgctaaa ctctcctcat tctacgccgt aataaacagc cttacggcgt agattttttt 301 ttaggagttt tttatgactt tacttatttt aatcgttatt gctattgctt tatttataat 361 actccgcaaa tgtaagttac ccaagattgg cagtttggct tgctttactg gtggtgtaaa 421 gactggtaaa agcgctgttt cacttcattt tgccattcgc acatataaac gcattcgttt 481 ttcttggcat atcaaatgct ttttttgcaa gatttttcgc aaagaaaaac ccgaagaacc 541 tttgttttat tcgaatatcc ccttgcgtaa aattaaatat gttcctttga ctcgcgacca 601 tttattacgt aaagtgcgtc ttaattgggg tagtgttgct ttccttgatg aagtcgctct 661 cgttgccgac tcccagctta ttcgaaacgg cgaaataaat tttcagcttc ttctatttac 721 aaaacttttt ggtcactctt gcggcggttt gttaatattt aattctcagc aaataaccga 781 tttgcattac gcctttaaac gttgtacttc tcagtatttt tatattcacc atacaacaaa 841 actccctttt attcgtttga gttatctccg tgaagaacgc tacagtgaag atggtactac 901 cattaacagt tatgataaag acgttgaaga cagccttaag cgcattgttt actttagctc 961 tatatacaaa aaatacgacg cttactgtta ctctgtttta accgaccatt tgcctaccaa 1021 aaatgaaatt aagtataatg gtaagcatga tagccttaag actaccaata ttgtatcttt 1081 tcgtaaagaa tataccgacc tttttgtttc gggtaagtcc gaaatcgata aagttatgag 1141 tgaggtttct acaaatgcgc aaacgtaatt gtaatcattt attcgattgt attttctggt 1201 atacaattta ccttctcccc gttatcctta tgatagttta ctattttaag ggtagcgcta 1261 cccctataac tgctataggc gatttttgcc aagagcttgg cataaatttc gctgaaaacc 1321 ccttgtttag tggcatatac ggcatttttg gtgctgacgg tatattcccc ttgcttactt 1381 cttctgcccc tttatacccc gttgtatggt ttttaagtat ggttttaatt catcttgctg 1441 ttgatgttct tctgtttatc cctcgacttt gtcaccagtg gatcgaatct tttaaatcta 1501 aaatgtgagg tttaaattat gcaaaatttt gatgaaaaat cttataatcg ccgcgaattg 1561 cgttataata ttgcaatgtt tgttctttgc atttcttttg ctgtattttt gcttggcttc 1621 ttctttctta cctcttattt tgacaaaaaa caatcttatc ttaacgctaa aacaaatacg 1681 caatctattt tgtgttcttc tcgtgacgtt gttgctgatg actctcaata tacttacact 1741 tctcccataa cttacggttc agctttatat ggtatcgctc ctaattacaa ttctggttcc 1801 atatcccttg cttttgttat acaattccgc taccaaaata atgtttgtta tgtgtccact 1861 tctaacacta ttttttatgc tatctcctct tctacatctt atcgcccctc ttctgttttc 1921 tctgtaactg gcgctgactc ttatactaat aatgaattta ctgccggcac agaaaaggac 1981 gttattgttt tatattcttt cattggttta aatggctatt tacgtgtcgt ttaccatttt 2041 tctccattac cttatatcgg ctctacttat caattaaata ctattaccac taccgttgat 2101 cttggttcta ctacttattc ttatcaaact tttgattccg gctcattgtc ccctactttt 2161 ttaagtgtta gttatagcat tacccctatt tcctcattat ctcatccctc taccactatt 2221 cgttatactg accttgctct tgagcttatg cgcaccggtg aatattccga tgggtataat 2281 aacggttatt atcttggcta tcaagagggt caacaaagtg gctttgatag tggttattct 2341 caaggcaatt ctgctggctt aaacactggt tatcatcaag gttacaacaa aggcgttctt 2401 gaatcaaata actatagttt cctcggctta attggcgctg tctttgacgc tcctattcaa 2461 gcttttaatg gtcttttcga tttcgaaatt cttggtgtaa acatgaaaca atttgcgctc 2521 actttactta ctttctgctt tataatcact gtcgtgcgac ttgttaaagg cggttaatta 2581 tggctaaaac ctatgacgga catcattaca cttttcgaaa tggtgcggtt gtttttggac 2641 cgtctcgtga tactgccaaa aaaaccgctt ttacaatctt taagcttatt tttttgctta 2701 tgattgtttt ttctattgta aaaattctcg ttggtcgcga ccccattacc ttttctggtt 2761 tattaagtac attgtctaat gcccctactt tttcaaccga ttggataaaa tatgttcaaa 2821 caaatttttc tgaaacgttt ccttggggtt ttcagtggct tggttctatt gtagatttct 2881 ttacggattt gttgtccgtt tctcttttcg tttcggttgg tgccgcaaat gtcataactt 2941 ttattttata tttcatgcgt tatcttttct tttaagggtt taaggggggc gctttatgcg 3001 ccccccccct taatgcaatc taatttataa aaaaaatatc ataatagagg ctgttatatt 3061 atgaaaccta aaagcaatta tcgttctcgt cattggtcac ttactactta ctcaactcct 3121 caagaattct ctcctcttct ctctctttgt tctgaatact cttatatata tcataacaaa 3181 gaagaatctg aacctcatta tcacattctt tgcattttca aaaacgcaaa gacttttact 3241 gcggttagaa gttatatcca aggctcacaa aatacctttg gagaacccgc tcgtgattta 3301 aacgccttat atcgctatct aacacacaaa gacaatccag acaagcacca atacgaggat 3361 accgaaatta tcgcttctaa ccccttttat tggcttcaaa tcgcaaatca agaatctttt 3421 gcaaaagatg gtgaaaaagc actcaatctt cttgaggata taaatgctaa aaaatcctat 3481 cgctatatgg ttttaactta tggtcgcgat tatatcaaaa atcatgtagt ttatgaagaa 3541 atggctttta aactttttat tcaagaacaa gatgaagaaa aaaataaaca acaaatttat 3601 gatatatttt aaaagaccct tgcgggtctt ttttttttat ttttctaatt ctcttttttc 3661 tatattcatt atcatttttg tcatgtcttt atttttcttt ttaagccttt taatctctct 3721 acaattacac atttgtccac ctattttttt tatgtagttt attacatttt ccatactctc 3781 cgctttaaca taattcaatg ctccacctac ccatgttatt ttaaaataat atttcattgt 3841 gtttacccct tttttaaact atttcttaat cttaattccc gtgcgcattt tatacaaaag 3901 gtttgtcccc ctcttcttgt aatccagttt ctcgatttca caaattcttt tgcttgtttg 3961 cttagtattg tcttatttat tagtagcgtt tccatttcta ttttctcgtt acacttatcg 4021 caaaacactt ctactctacc ccaattataa atcattatct tactctccca ttatttcaca 4081 tttatatgtc atcacatttc caagtattat catttgtaaa aattttccat ttttggtact 4141 gaacactatt gctgagttta ttgcatttat ctcgtcgtta aaattttcct ttataaattt 4201 ttcaaattct tcatttgatt caaattctac atgatccata caatcttctg taaaatctac 4261 ttttattttt aattctacta gtcctctcat ttgctcctta atcctaaaaa aagtttttat 4321 ttgcatttct atctcctccc gactgtttag gttgtcaccc ttatttactt atagtatacc 4381 acatatcaat atgtctgtca atagtacaac atattttttt gttcaagttt tttgtacctt 4441 taaacacacc gcttaagttg tttcggcagt gcttgttctc gagcgggaac ctcccctccc 4501 actgcccctt gattatttgg gtagccctgt ttagcactac aatataattt gccataaata 4561 ttaaacgttt aggtcgaaag taaaagtttg tagccgctcc gcaatatgca aactttactg 4621 cgatagagag ttgctttaag cagttgcatt cgttggcggt gcttaatccc cgtctattgc 4681 tttgttgctc gccatggcaa aagcactcgg tttctgttag cactcccccc cccccttggc 4741 gcgtagcgcc ttttacaagg ttcgccatta ctgcgtcaat ggcgaacctt gtgtagctgt 4801 gtagactata ttataattat aatatatata cgtatatgta ggttacacaa gaatttacac 4861 aagcgttaca ctttgtgtag attttgcccc tattttgtgt aaaaaaaatt taaaaaaccc 4921 cttgacaatc tttttattat atgttattat attatcgtcc ttaaaggata aaataaaaaa 4981 aagaggtaaa aaaaatgtca gaagttaaaa aaattcccgt gttccttgta cgtaacgtat 5041 ctaaaaaaga tacaactaag tcgtattttg ctatcattgc agaattaggt tatcgccaag 5101 cttttcttac ttttagtgca aatgagatag ctgaaatatg ttcactcgct cttcccgatt 5161 tgtatacact tcccataggt acaaaaaaat tacttggttc ttttgatgtt tctaaggtcc 5221 ttgattaacc atgtacgttt ttactgtttt acataacggc gttcaagttt tatctgtccg 5281 catcaaatct ctctccgaca tctctgtttc taattctgtt ttaactgtca aatctcttgt 5341 tggtacctac gatttacctt taatgccttg ttttgtattt actattttta gtgaggtgta 5401 attatggcat atgttatagg ctctatactt cttgtagctt ttgccttatt ctttgttttt 5461 caaatcgttg gctttattcg tgacgctaaa gagcgtaaaa gtaaaaaagt atctcagtcc 5521 gccccaccgt cggaagaaga taaatctaat aaggaggaat aaaaacct //