LOCUS MH622909 6301 bp DNA circular ENV 05-AUG-2018 DEFINITION Inoviridae sp. isolate ctcj22, complete genome. ACCESSION MH622909 VERSION MH622909.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074565 Sequence Read Archive: SRR7122341 KEYWORDS ENV. SOURCE Inoviridae sp. (fecal metagenome) ORGANISM Inoviridae sp. Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 6301) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 6301) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 907.771147x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..6301 /organism="Inoviridae sp." /mol_type="genomic DNA" /isolate="ctcj22" /isolation_source="macaque stool" /db_xref="taxon:2219103" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043905; metagenomic; derived from metagenome: fecal metagenome" CDS 1..300 /inference="similar to AA sequence:UniProtKB:Q45959_CLOBU" /codon_start=1 /transl_table=11 /product="ORFD polypeptide" /protein_id="AXH71845.1" /translation="MLDRQIRALIEYEYIHRKVSNFGWKGKLLSSLSLGKLFVSVKMW YPMKQRVGSEFYKAKKLYYGLYDTYAMFDGLGQAEEGEQGDPADAKTCPGALPPT" CDS 413..1264 /inference="similar to AA sequence:UniProtKB:A0A0Q0V1D3_BACTU" /codon_start=1 /transl_table=11 /product="replicase" /protein_id="AXH71846.1" /translation="MYNVKIKNYGNGQVQTRIYSHLIYTGDKEKTEKEELEHNPFDGE PTKEVRDFEELEKERERSLNSNMKRAKGKIYDYSRANVWDWFVTLTFAPDTVNRYDYT SCTKKLSEWLHNMRRDTETNFKYIVVPERHKDGAYHFHGLFAGCDSLGITFSGHCTNE GEKIYNIGRYKLGFTTATRVRQNEAVTKYITKYTTKDLMEHIKGKKKYWVSRNLNLPV ETTYSLEDVEKQSLHNELAQDGCLFYKSCMYEVGTAVRNVRYYEHMIPEETENKRFVR KKVIGKK" CDS complement(1507..1872) /inference="similar to AA sequence:UniProtKB:R6IMI4_9FIRM" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH71853.1" /translation="MKVTDAPTTTVWTLTHFCVIIWLIYCISNTIMLPKCTTSAQPYI TIDSTTLQPLFFSNAKEGEQVPSKLPIIKANTTQENIDKMKYIAKKNKRSMAKELELL IEIHIKEYESLHGEIKIEK" CDS complement(1869..2111) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH71852.1" /translation="MICLISSCVNVVFLINPAPHQSAEDINTVSLPSSRINVARSLNL IKFPNSVSIFIPADLPFFFYMAVTGAYGEVTATGYK" CDS 2734..2979 /inference="similar to AA sequence:UniProtKB:G5HM10_9FIRM" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH71847.1" /translation="MKLNGNFIFQGSEARTGIKDPTKTYYEAALLSGIEQLRSSCDQK LFSEVLPGIKPFTECNCVFSFNPQYNTLKLTEIYPVK" CDS 3119..3562 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH71848.1" /translation="MRCNMDDFTDGLEVTDNTPTLPEENQEPAIEPETTPEMERPSSS FASDLPDTAADQEQTQEQPEQTSEELEQETEVTPQEETGTVSYEDLLKTLTEQTEEIK AIHALEEKKQEFYTNYQSMGIAFIVGCGLLCGCICTLILANYLRH" CDS 3723..4037 /inference="similar to AA sequence:UniProtKB:A0A0E9FTU8_CHLTH" /note="Phage major coat protein Gp8" /codon_start=1 /transl_table=11 /product="major coat protein" /protein_id="AXH71849.1" /translation="MYKEERKAMKTTVIEKGRMKMNALKKGATALAVGGSVMLAGALP VFAAEGDTAETAIVTGMTSAASSMTSLVTKAVPIVVPILTAVLVVKFGMKLFKQLTGR AS" CDS 4226..5665 /inference="similar to AA sequence:UniProtKB:A0A0L6JJZ2_9FIRM" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH71850.1" /translation="MTTAEWIASIAASAGIAISFSDLLGKPREDVRDWDSYDWGKLLD DPATQKQIDETDKKIEEYYNNAVKDWYVKHGGQLSPSPAPTTTPQPPVTVAPIDPDTV EPPIDWDTLKKNTKKTGVLSMMGATLACMRNGLAAFWDDVIGPLKIDETSMDPLTVSK IKSGGYPYYFTYYNKDNKSSFIVLYGVGSFLDDSKQELRYVESAACYRLNGEDKYSKW SYSKYSSLGQYSYKYLYSNSYSNIVTNLPHFSDTKSGEEWSEKQRNKKKIPKAAIIPD LTQKQAYDNNSSIGDSTSSGSGSSPGSNTDKPFNFKIPTIDEIKDFLKDLMGGDENDQ PTKVTNFITNHMVQPTPAPNPTTAPNPGGGESGGGSIDPDNPDSGDTDLDNYKADLRD VFPFCIPFDLIHLLNVLDAEPEAPVFKIPIDLEAGNPFTGDKIVDYHSEMVIDLSDYD DAIKVIRILEIIAFLLGLMLITRQQMIKG" CDS complement(5948..6262) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH71851.1" /translation="MPMESEETKPVSTSLLSPVPGIKYPLTFINDQKYRTFFYFSIPF YVILGKVNKIIRRKSILPDKTKLLFSGQFYLFRSHRKVTDTRFPGTNPPVNRFSHMQA FS" ORIGIN 1 atgttagaca gacaaatcag agcattgatt gagtatgaat atattcacag gaaagttagt 61 aattttggct ggaaaggaaa gctactctct tctctctcac tgggaaaatt atttgtttct 121 gtgaagatgt ggtatcccat gaagcagaga gttggcagtg agttctataa ggcaaagaaa 181 ttgtattatg gactgtatga cacgtatgcg atgtttgacg ggctgggaca agctgaggaa 241 ggggagcaag gggaccccgc cgatgcgaag acctgcccgg gggctctgcc ccctacttga 301 ctatagcatc acttaacggt attttctttc cctgacggac aaacacgtcc tgatcaggat 361 ttcggaaagg gtaaaattcc gcaacagacg gacacgaaat aaggtgattt ttatgtataa 421 tgtgaagata aagaactacg gaaacggtca ggtacagaca cgcatttatt cccacctgat 481 ttataccgga gataaagaaa agacagaaaa ggaagaactt gagcataatc cttttgatgg 541 tgaacccaca aaagaagtca gggacttcga agaattagaa aaagaacggg aacgcagttt 601 aaatagtaac atgaagcgtg ctaaaggaaa gatctatgat tattccagag ccaacgtctg 661 ggactggttt gtcactctca catttgcacc ggatacagtt aacaggtatg attatacatc 721 ctgtacaaaa aagctgtcag agtggctgca taatatgaga cgtgacactg aaacgaattt 781 taagtatatc gtagtacctg aaaggcacaa ggacggtgca taccactttc atggactctt 841 tgccgggtgt gattcactgg ggataacttt cagtggtcac tgtaccaatg aaggggaaaa 901 gatttacaat ataggtcggt acaaactggg ctttaccact gccaccagag taagacaaaa 961 tgaagcagtg accaagtaca taaccaagta cactactaaa gatctgatgg aacatatcaa 1021 gggaaagaaa aagtattggg tatccagaaa tctgaacctg ccagtagaaa ccacttattc 1081 tctggaagat gtggaaaagc agagcttaca taacgaactt gcacaagatg gctgcttatt 1141 ctataaaagt tgcatgtatg aggttggtac tgcggttagg aatgtgcggt attatgaaca 1201 tatgataccg gaagaaacag aaaacaaaag attcgttaga aagaaagtta ttggtaaaaa 1261 atagaggggc ttgttgctcc tctattttaa tatcagtaaa attattagaa caaatattat 1321 aaaagataat aaacgaatta atttacctgt gggagttttg taaaattcat ctgatttttt 1381 ccagtctttt gttatcattg atttatatag ttctcgcttt agtaatctat cttcaaaatc 1441 atcgtttttt gtttctctta ttcgtttata ggattctttt ctgtccatac acttctatct 1501 ccttgtttat ttttctatct ttatttctcc atgtaaactt tcatattctt tgatatgtat 1561 ttctatcaac aattctaatt ctttagccat agatctcttg ttttttttgg ctatatattt 1621 cattttatca atattttctt gagttgtatt tgctttaata atgggtagtt ttgatggcac 1681 ttgttccccc tcctttgcat ttgaaaaaaa aagtggttgc aaagtagtac tatctatggt 1741 aatatatggt tgtgccgagg tagtacactt cggtaacata atagtattac ttatacaata 1801 aatcaaccaa attataacac agaaatgtgt tagtgtccaa acagttgttg taggtgcatc 1861 ggtaaccttc atttgtaacc tgtggcggtg acttccccat atgcaccagt taccgccatg 1921 taaaaaaaaa atgggaggtc tgctggtatg aatatcgaaa cagagtttgg aaattttatg 1981 agatttaaag atcttgctac atttatgcga cttgaaggta aagatacggt atttatatct 2041 tccgctgact ggtggggagc aggatttatt aaaaatacaa catttacgca agatgagatc 2101 agacagatca ttgagggagc gtgatatcta agtgtatgga tatggacttg acattattac 2161 taatgactat cagtttcttt ttcgctttgc tttggaaaca gatgcactga tcgagcctgg 2221 tgactttgat acgcattgta attgtttcac acttcgttat acagaagaac tggagtgcaa 2281 aagggctgaa actttattaa gttccattgt acagggagcg tgatcggatg cagttcacta 2341 catgcgttct gatgacaaag aagcatctgg acaaatatat agaaatgctt gaccagagga 2401 tagagtttct gagattaaag aaagaaaaac agacagactt tgataaacag gaactttgta 2461 tctatattgc tatgcggaat catgcgtatg aggcaatgga aattttccgc taaagcggaa 2521 agaagatcta gtatgaaaaa ttcacatttt tcaaatagat ctgcgatcta ccgccaccag 2581 tatggaaggt ttgaaagttc gggattcttc catactgctg gcttttgaaa aacgtccagt 2641 ttttcatata gatctatatt ttttccctgt aattccagta tatatacgtt tcaaagtaga 2701 tttattataa cacaactcaa ggaggtttta aaaatgaaat taaacggtaa ttttatcttc 2761 cagggttcag aagcaagaac cggaattaaa gaccctacta aaacttatta tgaagctgct 2821 ttactctcag gtattgaaca gctccgttca tcctgtgacc agaaactttt tagcgaagtt 2881 cttccaggta tcaagccatt tacagaatgt aactgtgttt tttcatttaa tccacagtac 2941 aacactttga aactgaccga gatctatccg gtcaaataat ccaacttgct gtcggtatac 3001 cgcctgtaag gcggattatc cgacgtttaa acattatctc ctttgaacag tcggtaaatg 3061 ggacttgcgg gaactgcgtc ctgtttgccg acacgtgaaa acggtctgat taccattaat 3121 gaggtgcaac atggatgatt ttacagatgg actggaagta actgataata cacccacact 3181 tccagaagaa aaccaggaac ctgctataga accagaaact acaccggaaa tggaacgacc 3241 ttcctcttct ttcgcttctg acctgcccga cactgccgcc gatcaggaac agacacagga 3301 acagccggaa caaacttctg aggaactgga gcaggaaacg gaagtaacac cacaggaaga 3361 aaccggaaca gtttcttatg aagatctcct gaaaacattg acagaacaga cagaggaaat 3421 taaggctatt cacgcattag aggaaaagaa acaggaattc tatacgaatt accagagcat 3481 gggtatagcc tttattgtag gctgtggctt gctctgtggc tgtatctgta cattgattct 3541 ggcgaactat ttaagacatt aaagggtgat gataatggac gtaatagacg gtacaacagt 3601 aacctattcg atagaatact gtgtaaagct tatggcttca atgattccta taggtatggg 3661 tctgggtatg attccactga tatttgggct tggtatctca ggagttgtga agatattcaa 3721 aaatgtataa ggaggaaaga aaggctatga aaacaactgt tattgaaaaa ggcagaatga 3781 aaatgaatgc tcttaaaaaa ggtgcgacag ctcttgcggt tggcggctct gtgatgctgg 3841 ctggtgctct cccggtattt gcagctgaag gtgatactgc tgagacagct attgtaactg 3901 gaatgacttc cgcagcttct tccatgacaa gccttgtaac taaggctgtg ccgatcgttg 3961 tcccgattct gacagcggtt cttgttgtga agtttggtat gaaacttttc aaacagctta 4021 ctggcagagc aagctgacaa acaaataaga aaccagtgga cggacggggg agagaaatct 4081 tccccgtttt tgttatgtaa agggggatat tgtgaaaaga ataaaaacac gcttgcttgc 4141 tcttcttctc tcctgctgtc tggtaacagt ggggactgta acgccatgca gacagactca 4201 ggctgctgaa attgttgttg gtggcatgac tacagcggaa tggattgcat ctatagctgc 4261 tagtgctggt attgcaatca gtttttctga ccttttagga aagccaaggg aggatgtaag 4321 agactgggac agctatgact ggggaaaact cctcgatgat cctgcaacgc aaaagcagat 4381 agatgaaaca gacaagaaga ttgaagaata ttataacaat gctgtgaagg attggtatgt 4441 aaaacatggt gggcagttgt cgccctctcc tgcccctacg actacgccac agcctccggt 4501 tacggttgca cctatagacc cggatactgt agaaccacct atagactggg atacattaaa 4561 gaaaaatacg aaaaaaacag gtgtattgtc catgatgggg gctactcttg catgtatgag 4621 gaatggtctt gcagcgttct gggatgatgt tataggacca ctgaaaattg atgaaacttc 4681 tatggatccg ttaacagttt caaaaattaa gtctggtgga tatccttatt attttaccta 4741 ttataataag gataacaaat catcttttat cgttttatat ggggtaggtt cgtttttaga 4801 tgatagtaaa caagaattac gttatgttga atcagctgct tgttataggt taaatggaga 4861 agataaatat tcgaaatggt cttattctaa atattcatcg cttggacagt actcttataa 4921 atatttgtat tctaatagtt actctaatat tgtaacaaat ttacctcatt tttctgatac 4981 taaaagtgga gaagaatggt cggaaaaaca aagaaataaa aagaaaattc ctaaagctgc 5041 tatcatcccc gatcttaccc agaaacaagc ctatgataac aactcttcta ttggtgattc 5101 tacttcttcc ggttctggat ccagtcctgg aagtaatacg gataaacctt ttaattttaa 5161 gattccgact attgatgaga taaaagactt tctgaaagac ttaatgggcg gtgatgaaaa 5221 cgaccagcca acaaaggtaa caaattttat aacaaatcat atggtacagc caactcctgc 5281 tccgaaccca acaactgcac caaacccggg cggcggtgag tctgggggtg gttcaataga 5341 tccggataat cctgattctg gtgatacgga tttagataat tataaagcag atcttaggga 5401 tgttttcccc ttctgcattc cttttgacct gatacacctt ttaaacgtat tagatgcgga 5461 accggaagca ccagtattta agattcctat agatctggaa gctgggaacc catttacagg 5521 tgacaagatt gtggattatc acagtgaaat ggtgatagat ctgtctgatt atgatgatgc 5581 aataaaagta atacgtattt tggaaattat agcttttctt ctcgggctta tgctgataac 5641 cagacagcag atgataaagg ggtgatttta tatgtttgca tggatgaaag aaatactgga 5701 caagcttttg gcagtggttc tgtctcttct gccactttct ccctttaagg aatttataga 5761 caagcttgaa gatattccat ttttgggata tttgaactat tttatcccgg tgggtacgtg 5821 cttaaagatt ggtgcggcgt ggctctctgc tatcgcactc ttctatctgt acagcgttgt 5881 tgcacgttgg attaaactga ttgaatgagg tgatattgtg atctctttat actctggtac 5941 accgggctca ggaaaaagcc tgcatgtggc taaaacgatt tactggtggg ttcgtgccgg 6001 gaaaccttgt atctgtaact ttcctgtggc tacggaaaag ataaaattgt ccagaaaaca 6061 ggagtttcgt tttgtccggg aggatagact tacgccggat tatcttgttg actttgccca 6121 ggattacata aaaaggaatg gaaaagtaaa agaaggttcg atacttctgg tcattgatga 6181 atgtcagcgg atatttaatg cccgggactg gggacaaaag ggacgtgctg actggcttag 6241 tttcttcact ctccataggc atcttggata tgatattatc ctgatcgcac aatttgaccg 6301 t //