LOCUS MH552488 6561 bp DNA circular ENV 28-JUL-2018 DEFINITION Inoviridae sp. isolate ctda6, complete genome. ACCESSION MH552488 VERSION MH552488.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074535 Sequence Read Archive: SRR7122363 KEYWORDS ENV. SOURCE Inoviridae sp. (animal metagenome) ORGANISM Inoviridae sp. Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 6561) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 6561) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (28-JUN-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 21.850937x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..6561 /organism="Inoviridae sp." /mol_type="genomic DNA" /isolate="ctda6" /isolation_source="abalone tissue" /db_xref="taxon:2219103" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="closest relative: Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae gi|363542402|ref|YP_004539131.1|-unnamed-protein-product- [Stenotrophomonas-phage-phiSHP2]; genome binned from sequencing reads available in SRX4043883; metagenomic; derived from metagenome: animal metagenome" CDS 1..1323 /inference="protein motif:CDD:283385" /note="zonular occludens toxin (Zot)" /codon_start=1 /transl_table=11 /product="zonular occludens toxin" /protein_id="AXF52021.1" /translation="MLVFNEGVPRAGKSYDAVKNHILPTIKKGRRVFARLNGLNHERI AEYLGMPVDEVHQLLTLVDTKDVAATFACYKDDVTGQWCIPDQFKDSLCVIDEVHEFY VAQRQPLPDAVENFWALLGQNGGDAVIMTQWINRVHQAVRARIERKNVFQKLTAVGMK TRYRVTYFHTTSPGKYERVGGKTEKYDPAIYPLYHGYAVGSENTEVYEEGGTNIWKSL ALKGSIFGVVGLVGAIVFIRFFLTGGGMVPEEEKTDELPGMKAQASGAANPAPQVPGM PSKKAEPDPIEKLSPEQRYVAQLSKSNRIRLALTASFGERQVGMVEWVDSSNKTADQL SFDALTAMGYRVRVFAYGAKLTAEEYTLIATAWPREAPQRDVDARLYRLDDASAGAGL ATGGSEAGAGVRVSGGNGTAPTASSTLVRVGERPMGTFPESKPYPPSF" CDS complement(925..1353) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52020.1" /translation="MSSICVTHQALEAGRIRLRLWECPHRALTNANQRAAGRGCCAIS ATDADAGAGLTPSGRKAGARARVVQAVEARVHIPLRRLSRPSRGNEGVFLGGQLRPIG EYADSVAHRSQGIKAQLIGSLVAAVYPFHHADLAFTERCR" CDS 1386..1814 /inference="similar to AA sequence:UniProtKB:A0A0P7GP91_9XANT" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52013.1" /translation="MDIRLGAMCVLLVVTGVAPAQQIHSARGPAPKAVPAAPKAAYNS MAKSTTPFNCEQYRWPNHPHPGMKPLCDGLEANALQRESSQAGRPSPSAEVVTLPAMG TDAAKRSGMACIGGQAMRRLPNGWEQISSRSGGWLRCREQ" CDS complement(1851..2081) /inference="similar to AA sequence:UniProtKB:A0A031HGC3_9GAMM" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52019.1" /translation="MMGELRRTPAVSRGSQKPCAARPTESQLVYGRAEVVTISTLIAN RKKRSAVVIAGPDAEPPAGVLPVPGPKRRQRV" CDS complement(2228..2722) /inference="similar to AA sequence:UniProtKB:B2FRH6_STRMK" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52018.1" /translation="MYSPAIHPCQGLLTMDTANDLLDKVKAACNFPSDNVLAQKIGLT RAMVSSWRHGRHPIPDERIAQMCALAKLDGPTWIAMLHAERAQTATERALWRLMLNRL SAAAAVVALVALSMPGLANAKTAQNQAVSGGLLTHSVYYVRRAWARLARSLPRPLALL WHGA" CDS 3203..4309 /inference="protein motif:CDD:225497" /note="putative replication protein RstA" /codon_start=1 /transl_table=11 /product="putative replication protein" /protein_id="AXF52022.1" /translation="MAGERVVLAESGLPSSNRGVSEFRNADGTLTVGIDWFSASIDLR AALDELAFRDGDSFEEVRQWIEFSPENARIAALQVFCWFFAGLGLELDETAGGGRFYT WRIKIIDAAKKFVGMIELGGEECRRADGTYTARIELTGDGCKAIGAARCGHAQRWLEL RAKLESCAGRITRVDVCADDLVGDYPLRMAQKWYANGDFDNRGQRPKAQLVDDYDSGD GKTFYVGGKKSEKQLRVYEKGREQGDKSSPWVRYEAQFRNSNRKELPLDILRDPASYL LGAYPVLSFLRCVATRIEITKAAVEATWKSVRRHIRRQYGAALNFIAKNCPDDQALRA VIESCTSPSLPKWVTGDTAAHWPEIAAVQPTQKG" CDS 4316..4618 /inference="protein motif:CDD:308106" /note="Helix-destabilizing protein" /codon_start=1 /transl_table=11 /product="helix-destabilizing protein" /protein_id="AXF52023.1" /translation="MSIKVTVLKSDVEERKGSFKNDAGEMVEFTTRKQKAKLEAGGFA YPLDVRLDNGQTGYPEGEYELDVDSMIQVNKGVINLSKYTALRPLPKPAPRVAGQA" CDS 4622..4876 /inference="protein motif:PFAM:PF17091.4" /note="Tail_VII Inovirus G7P protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52014.1" /translation="MGLCVAFGEDGTLIPTGQPVDQCAGYVLMSSAEASTVALIAEAF QPPSKEQLAVWAVSPMALIIFFFVVARIAGSVASFFNTHR" CDS complement(4886..5137) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52017.1" /translation="MVGCNDAMMLSKSIRPPNRKGQVSLPHPAPSHYLPKKPATFFAA QLEKPTSAINAAAATTAVVAEETDRPSRIPLKSMMKLLS" CDS 5173..6216 /inference="similar to AA sequence:UniProtKB:Q8NL07_XANCP" /codon_start=1 /transl_table=11 /product="adsorption protein" /protein_id="AXF52015.1" /translation="MRRSGSACGPHRRWRGSLCRGGCDDLVPLCGPVERALRHGGSTW AGCQMSVLSRILVGALLIGVSWQALADDQGEAYAKCMSHVNDPKGDDITDRQCQNDPT PNGGVYRVYYRLKTKNGVSGLIRYGVDYNWTNSCSSRPEEFGWQGGETAASVNVCHNG CMYTSSLDPKGTAGFSFSPTGGACTETDAPAPTPGGDGGDPGEGGGGDGGGGDGDGDG GGDGDGGGTGPGPGDGDGDGPGDGDGDGPGVPGGDGDALYEHDKNLTVEKVYSEFEQR VKKAPIIDATKRFFTVSVGGSCPVFTVPATAFWEAMTFDLHCSGAIYALLQLIGWVLL AMAAYRAGEIALT" CDS 6213..6560 /inference="similar to AA sequence:UniProtKB:A0A080LWR1_9PROT" /codon_start=1 /transl_table=11 /product="putative minor coat protein" /protein_id="AXF52016.1" /translation="MIQLFGFVTAQAGWLQDLTDWIRRQLERFWDAIVQFFNDLIILA IKAVLELVVMAFERLPVPDFMQQYSIGALLGNAGSTVGWFVQTFRIGECLAVIALGIA FKITRKILTLGKW" ORIGIN 1 atgctcgttt tcaacgaagg cgtgccgcgt gctggcaaga gctatgacgc ggtcaagaat 61 cacattctgc cgacgatcaa gaaggggcgc cgtgtgttcg cgcgcctcaa tggcctcaac 121 catgagcgca tcgctgagta cctgggcatg ccggtagatg aggtgcatca gctgctaaca 181 ctggtggaca cgaaggacgt ggctgcgacg ttcgcctgct acaaggatga cgttaccggc 241 cagtggtgca tcccggatca gttcaaggat tcgttgtgcg tcattgatga ggtccatgag 301 ttctacgtcg cacagcggca gccgctgccc gatgcagtgg agaatttctg ggcactgctg 361 ggccagaacg gtggcgacgc ggtgatcatg acgcagtgga tcaatcgcgt acatcaggcg 421 gtgcgagcgc gaatcgagcg taagaacgtc ttccagaagc tcactgcggt cggcatgaaa 481 acccgttacc gcgtgacgta ctttcacacc acttcgcccg gcaaatatga gcgagtaggg 541 ggcaagactg agaagtacga tccggcgatc tatccgctgt atcacggcta tgcagttggg 601 tcggagaaca ccgaggtcta cgaggagggc ggcaccaata tctggaagtc tttagcgctg 661 aagggctcga tcttcggggt ggttggtctc gttggcgcaa tcgtgtttat ccggttcttc 721 ctgaccggag gcgggatggt cccagaggaa gaaaagacag acgaattgcc cggcatgaag 781 gcccaggcat cgggcgcagc caatcctgcg ccacaggttc ccggcatgcc gagcaagaag 841 gccgagccgg accccatcga gaagctttca ccggaacagc gctacgtcgc ccagttgtcg 901 aaatcgaatc gcatccgtct ggcgctaacg gcatctttcg gtgaacgcca ggtcggcatg 961 gtggaatggg tagacagcag caacaagact gccgatcagc tgagctttga tgccctgact 1021 gcgatgggct accgagtccg cgtattcgcc tatggggcga agctgaccgc cgaggaatac 1081 accctcattg ccacggcttg gccgcgagag gcgccgcagc gggatgtgga cgcgcgcctc 1141 taccgcctgg acgacgcgag cgcgggcgcc ggccttgcga ccggagggag tgaggccggc 1201 gccggcgtcc gcgtcagtgg cggaaatggc acagcaccca cggccagcag cacgctggtt 1261 cgcgttggtg agcgccctat ggggacattc ccagagtcga agccgtatcc gcccagcttc 1321 taaggcttga tgcgtcacgc aaattgacga catcgagtaa catccctcca aactggaggg 1381 ggaatatgga cattcgactt ggggcgatgt gcgtattgct ggtcgtaacc ggcgtggcgc 1441 cagcgcagca gattcattcg gcgagaggcc cagcgccaaa ggcagtaccg gcagcgccca 1501 aggcggcgta caactcaatg gcgaagtcca caacgccgtt caactgcgag cagtatcgtt 1561 ggccaaatca tccgcaccca ggcatgaagc cgctctgtga tgggcttgag gccaatgcac 1621 tgcaacggga gtccagccag gcaggacgcc caagcccatc tgctgaggtg gtgacgctgc 1681 ctgcgatggg tactgatgca gccaagcgct caggaatggc ctgcatcggc ggtcaggcga 1741 tgcgtaggct gccaaacggg tgggaacaaa tttcctcgcg ctctggcggc tggttgcgct 1801 gtcgggagca gtgatccggg gtgtaggggc agcgccccta cggaagcgcc tcacacgcgc 1861 tggcggcgtt tcggccccgg taccggcagg acacctgcag gtggctcggc gtcagggcca 1921 gcgatcacta ctgcggaccg cttcttgcgg ttggctatta gggtgctgat ggtgacgact 1981 tcagcgcgac cgtataccaa ttgcgattcc gtgggccttg cggcacaagg cttttgactg 2041 ccgcgggaca ctgcaggagt tcgccttagt tcgcccatca tccggcgcca ttcctgtgcc 2101 tgtgcagcgg tgagtgagag ccatgccagg tcctgtggtt ccagttctcg gccctcgggc 2161 gtgaccagtc ggccaccctt aaacgaaaaa ccggcccaag ggccggttag gttgcgatca 2221 cgcacaatca ggctccatgc cacagcaggg ccaagggtcg aggcaagctc cgtgccagtc 2281 tggcccacgc ccttcgaaca taatatacag aatgggtcag tagacccccg ctaaccgcct 2341 gattttgggc ggtttttgcg tttgcgagac ccggcatcga cagcgctact agcgcgacga 2401 ccgcagccgc cgcgctcagc ctgttcagca tgagtctcca caacgcacgc tcggttgcag 2461 tctgcgcgcg ctcggcgtgg agcattgcaa tccacgtggg cccgtcgagc tttgccaatg 2521 cgcacatctg cgcaattcgc tcatccggga tcggatggcg gccatgtcgc caagaactga 2581 ccatcgctcg cgtgagcccg atcttctgcg ccagaacgtt gtcggacggg aagttgcagg 2641 cggccttcac tttgtcaagc agatcgttgg cggtatccat ggttagcaat ccttgacagg 2701 ggtgtatagc cggactatac atgcccccgt gtttggcgtg gctaaacacc ccgccaccgg 2761 caccccaagg ccgttggcgg gttgccttgg ggcttggggt gggggatcac gggtgttcga 2821 cgccatctca tcctttgcac tgctgggggc cattgcggcc atctccattg gtgccgctcg 2881 catcgtttcg tggctgctcg accggcgtga ccacaccgcc gcccagcaat cccgcgaagc 2941 ccaggtcatc gaactcgcaa aggctgagat tgccgccacc aagcgcggcg atctgctggc 3001 cgccgctcga ttcgccgaag aacaggagcg caccgcgtga gcaggtatcc ctcattcgcc 3061 gagctggcgg agttcgatat gggcctcgcg gcagtcgctg tgttcgtgtc gctcgtcgtg 3121 ggcggagcca tcgtctccat cgtgattgag caggcatggc tggcgcttcg tcgcctgtgg 3181 aagcttcgca aggatcgctc caatggccgg tgagcgcgtg gtgctggccg agtcgggact 3241 cccctcgtct aacaggggag tcagtgaatt caggaacgcc gacggaaccc tgacggtcgg 3301 catcgactgg ttttccgctt ccatcgacct gcgcgcagcg ctggacgaac tcgcgttccg 3361 tgatggcgac agcttcgaag aggtccgcca gtggatcgag ttctccccgg agaacgcccg 3421 catcgcggcc ctgcaggtgt tctgctggtt cttcgccggg cttggccttg aactggatga 3481 aacagcgggt ggcggtcgct tctacacgtg gcgtatcaag atcatcgacg cggctaagaa 3541 gttcgtcgga atgattgaac tcggcggtga agagtgtcgc cgcgcggatg gcacgtatac 3601 cgcccgcatc gagctaaccg gtgatggatg caaggcgata ggcgcagcgc gctgcggcca 3661 tgcgcagcgg tggctggagc ttcgagcgaa gctcgaaagc tgcgccggaa gaatcacccg 3721 tgtcgatgtg tgcgccgatg acctggtggg cgactatccg ttgcgtatgg cgcagaagtg 3781 gtacgccaat ggcgacttcg acaaccgtgg ccagcgcccc aaggcgcagc tggtggacga 3841 ctacgacagt ggcgacggca agacgttcta tgtcggcggc aagaagtcgg aaaagcagct 3901 gcgtgtctac gagaagggca gggaacaggg cgataagagt tcgccgtggg tgcgctatga 3961 ggcgcagttc cgcaactcca accgcaagga actgccgctc gacattctgc gtgatccggc 4021 gtcttacctg ctgggcgcct atccagtcct gtcctttctg cgctgcgttg ccacgcgcat 4081 cgaaatcacg aaagccgccg ttgaagcgac gtggaagagc gttcgtcgcc acattcgtcg 4141 tcagtacggc gcggccctca atttcatcgc caagaactgc ccggacgatc aggcgttgcg 4201 ggcggtaatc gaatcctgca cttcgccatc gctgccgaag tgggtcacag gcgacacagc 4261 agcgcactgg cccgaaatcg cggccgtaca gccaacccaa aaggggtaac aacacatgag 4321 catcaaggtc accgtcctca agagcgatgt tgaagagcgc aagggcagct tcaagaacga 4381 tgcaggtgaa atggttgaat tcaccacgcg caagcagaag gccaagctgg aagctggcgg 4441 cttcgcgtac ccgctcgatg tgcgcctgga caacggccag accggctacc cggaggggga 4501 gtacgagctc gacgtcgatt cgatgattca ggtcaacaag ggcgtcatca acctgagcaa 4561 gtacaccgca ctgcgcccgc tgccgaagcc tgcgccacgc gtggccgggc aggcctaagc 4621 catgggcctc tgtgttgctt tcggggaaga cggcacgctg atcccaaccg gtcagcccgt 4681 tgatcagtgc gcggggtacg tgctgatgag cagcgcagag gcctccaccg tggcgctgat 4741 cgcagaggcg tttcagccgc cgagcaaaga gcagcttgct gtgtgggcgg tatcgcctat 4801 ggcactgatc atcttcttct tcgtcgtcgc ccggattgcc ggttccgtgg cgtcgttctt 4861 caacacccac cggtaaccca tccactcatg aaaggagctt catcatggat ttcagcggaa 4921 ttctggacgg cctgtccgtc tcctcggcca ccactgccgt tgtcgccgcg gcggcattga 4981 tcgcgctggt tggtttctcc agctgggcag caaagaaggt ggcgggcttc ttcggcaagt 5041 aatgcgaagg ggcagggtgg ggcagggaaa cctgcccctt tctattggga ggtcgtatgg 5101 attttgacag catcatggcg tcgttgcagc cgaccattgt tgtgcttgca attctcgctg 5161 ctgcggcgct ctatgcgcag atcaggttct gcctgtgggc cgcaccgaag gtggcgcggt 5221 tctttatgtc gaggggggtg cgatgatttg gtgcctcttt gcgggcctgt tgagcgcgct 5281 ctgcggcatg gcggcagcac ttgggctgga tgccagatga gcgtcctctc gcgcatcctc 5341 gtaggagcgc ttctgattgg cgtgtcgtgg caggcgctcg cggacgacca gggcgaggcc 5401 tacgcgaagt gcatgtcgca cgtgaatgat cccaagggcg acgacattac tgatcgacaa 5461 tgccagaacg accccacgcc gaacggtggt gtttatcgcg tctactaccg gctaaaaaca 5521 aagaatggcg tgagtggcct gattcgctat ggagttgatt acaactggac caacagctgc 5581 tcatctcggc ccgaggagtt cggctggcag ggcggcgaga ctgcggccag cgtcaacgtc 5641 tgtcacaacg gctgcatgta cacgagctcg ctcgatccca aggggaccgc aggtttttcc 5701 ttctcgccta cggggggcgc ttgcacggag acggatgcac ctgcgccgac acctggtggc 5761 gatggcggcg atccgggcga gggtggtggc ggcgacggcg gtggcggtga tggggacgga 5821 gatggaggcg gcgacggtga tggcggtggc accgggccgg gccccggcga cggtgatggt 5881 gatggtcccg gcgatggtga cggtgatggt ccgggcgtgc cgggcggtga cggcgacgcg 5941 ctctatgagc atgacaagaa tttgaccgtc gagaaggtct acagcgagtt tgagcagcgc 6001 gtaaagaagg cgccgatcat cgacgccacg aagcgattct tcaccgtctc tgtgggtggt 6061 agttgcccgg tgtttaccgt tccggcgaca gcgttctggg aagccatgac gttcgacctg 6121 cattgcagcg gggcgatcta cgcattgttg cagctgatcg gttgggtatt gctcgcgatg 6181 gctgcttaca gggcagggga gattgcgctc acatgatcca gctattcggt ttcgtgaccg 6241 ctcaggccgg ttggctgcag gatctgacgg actggattcg gcggcaattg gagcgcttct 6301 gggacgccat cgttcagttc ttcaacgacc tgatcattct ggcgatcaag gcagttcttg 6361 aactggtggt catggccttc gagcgcctgc cggtgccgga cttcatgcag cagtacagca 6421 tcggcgcgct gctcggaaat gcaggttcaa cggtgggctg gttcgtccag accttccgca 6481 tcggcgagtg tcttgcagta atcgcactgg ggatcgcgtt caagatcacc cgcaaaattc 6541 tgaccttggg gaaatggtga c //