locus-tag class description GIY02_00035 PF00263 Bacterial type II and III secretion system protein GIY02_00035 PF03958 Bacterial type II/III secretion system short domain GIY02_00035 PF00263 Bacterial type II and III secretion system protein GIY02_00035 PF03958 Bacterial type II/III secretion system short domain GIY02_00095 PF01975 Survival protein SurE GIY02_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_00105 PF08448 PAS fold GIY02_00105 PF00072 Response regulator receiver domain GIY02_00105 PF13426 PAS domain GIY02_00105 PF00512 His Kinase A (phospho-acceptor) domain GIY02_00110 PF00196 Bacterial regulatory proteins, luxR family GIY02_00110 PF00072 Response regulator receiver domain GIY02_00120 PF07690 Major Facilitator Superfamily GIY02_00135 PF13454 FAD-NAD(P)-binding GIY02_00140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GIY02_00145 PF01679 Proteolipid membrane potential modulator GIY02_00150 PF03786 D-mannonate dehydratase (UxuA) GIY02_00155 PF02447 GntP family permease GIY02_00170 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_00170 PF00571 CBS domain GIY02_00175 PF01053 Cys/Met metabolism PLP-dependent enzyme GIY02_00185 PF04076 Bacterial OB fold (BOF) protein GIY02_00195 PF04239 Protein of unknown function (DUF421) GIY02_00200 PF05974 Domain of unknown function (DUF892) GIY02_00205 PF05974 Domain of unknown function (DUF892) GIY02_00210 PF10685 Stress-induced bacterial acidophilic repeat motif GIY02_00225 PF00107 Zinc-binding dehydrogenase GIY02_00225 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_00235 PF07690 Major Facilitator Superfamily GIY02_00240 PF12833 Helix-turn-helix domain GIY02_00245 PF09905 DNA-binding protein VF530 GIY02_00255 PF03180 NLPA lipoprotein GIY02_00260 PF00005 ABC transporter GIY02_00260 PF09383 NIL domain GIY02_00265 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_00270 PF03060 Nitronate monooxygenase GIY02_00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_00275 PF03466 LysR substrate binding domain GIY02_00280 PF06779 Uncharacterised MFS-type transporter YbfB GIY02_00285 PF00155 Aminotransferase class I and II GIY02_00285 PF00392 Bacterial regulatory proteins, gntR family GIY02_00290 PF00892 EamA-like transporter family GIY02_00300 PF07690 Major Facilitator Superfamily GIY02_00310 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GIY02_00310 PF17770 Ribonuclease J C-terminal domain GIY02_00310 PF00753 Metallo-beta-lactamase superfamily GIY02_00315 PF13649 Methyltransferase domain GIY02_00320 PF08220 DeoR-like helix-turn-helix domain GIY02_00320 PF00455 DeoR C terminal sensor domain GIY02_00325 PF17042 Nucleotide-binding C-terminal domain GIY02_00325 PF07005 Sugar-binding N-terminal domain GIY02_00330 PF00596 Class II Aldolase and Adducin N-terminal domain GIY02_00335 PF01261 Xylose isomerase-like TIM barrel GIY02_00340 PF07690 Major Facilitator Superfamily GIY02_00345 PF01370 NAD dependent epimerase/dehydratase family GIY02_00355 PF00583 Acetyltransferase (GNAT) family GIY02_00360 PF08125 Mannitol dehydrogenase C-terminal domain GIY02_00360 PF01232 Mannitol dehydrogenase Rossmann domain GIY02_00370 PF00990 Diguanylate cyclase, GGDEF domain GIY02_00375 PF13811 Domain of unknown function (DUF4186) GIY02_00380 PF04960 Glutaminase GIY02_00385 PF00171 Aldehyde dehydrogenase family GIY02_00395 PF08220 DeoR-like helix-turn-helix domain GIY02_00395 PF00455 DeoR C terminal sensor domain GIY02_00400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GIY02_00405 PF17042 Nucleotide-binding C-terminal domain GIY02_00405 PF07005 Sugar-binding N-terminal domain GIY02_00410 PF00465 Iron-containing alcohol dehydrogenase GIY02_00415 PF00701 Dihydrodipicolinate synthetase family GIY02_00440 PF02567 Phenazine biosynthesis-like protein GIY02_00445 PF07690 Major Facilitator Superfamily GIY02_00450 PF01914 MarC family integral membrane protein GIY02_00455 PF01047 MarR family GIY02_00460 PF12833 Helix-turn-helix domain GIY02_00465 PF13999 MarB protein GIY02_00470 PF00892 EamA-like transporter family GIY02_00475 PF07690 Major Facilitator Superfamily GIY02_00485 PF01717 Cobalamin-independent synthase, Catalytic domain GIY02_00495 PF01965 DJ-1/PfpI family GIY02_00510 PF00990 Diguanylate cyclase, GGDEF domain GIY02_00510 PF13185 GAF domain GIY02_00520 PF00356 Bacterial regulatory proteins, lacI family GIY02_00525 PF02837 Glycosyl hydrolases family 2, sugar binding domain GIY02_00525 PF16353 Domain of unknown function(DUF4981) GIY02_00525 PF02929 Beta galactosidase small chain GIY02_00525 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GIY02_00525 PF00703 Glycosyl hydrolases family 2 GIY02_00530 PF01306 LacY proton/sugar symporter GIY02_00535 PF02463 RecF/RecN/SMC N terminal domain GIY02_00545 PF01432 Peptidase family M3 GIY02_00550 PF00106 short chain dehydrogenase GIY02_00555 PF07729 FCD domain GIY02_00555 PF00392 Bacterial regulatory proteins, gntR family GIY02_00560 PF00582 Universal stress protein family GIY02_00565 PF08125 Mannitol dehydrogenase C-terminal domain GIY02_00565 PF01232 Mannitol dehydrogenase Rossmann domain GIY02_00570 PF00083 Sugar (and other) transporter GIY02_00570 PF07690 Major Facilitator Superfamily GIY02_00575 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_00575 PF00107 Zinc-binding dehydrogenase GIY02_00580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GIY02_00580 PF13378 Enolase C-terminal domain-like GIY02_00585 PF07690 Major Facilitator Superfamily GIY02_00590 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GIY02_00595 PF06932 Protein of unknown function (DUF1283) GIY02_00600 PF13302 Acetyltransferase (GNAT) domain GIY02_00605 PF06788 Uncharacterised protein family (UPF0257) GIY02_00610 PF06649 Protein of unknown function (DUF1161) GIY02_00620 PF12800 4Fe-4S binding domain GIY02_00620 PF13247 4Fe-4S dicluster domain GIY02_00625 PF04976 DMSO reductase anchor subunit (DmsC) GIY02_00630 PF02613 Nitrate reductase delta subunit GIY02_00635 PF00654 Voltage gated chloride channel GIY02_00645 PF00480 ROK family GIY02_00650 PF03466 LysR substrate binding domain GIY02_00650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_00655 PF07690 Major Facilitator Superfamily GIY02_00660 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GIY02_00680 PF00089 Trypsin GIY02_00690 PF00893 Small Multidrug Resistance protein GIY02_00695 PF00893 Small Multidrug Resistance protein GIY02_00705 PF01594 AI-2E family transporter GIY02_00710 PF16957 Malonate decarboxylase, alpha subunit, transporter GIY02_00715 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GIY02_00720 PF06857 Malonate decarboxylase delta subunit (MdcD) GIY02_00725 PF01039 Carboxyl transferase domain GIY02_00735 PF03547 Membrane transport protein GIY02_00740 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG GIY02_00745 PF00698 Acyl transferase domain GIY02_00750 PF03466 LysR substrate binding domain GIY02_00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_00755 PF06039 Malate:quinone oxidoreductase (Mqo) GIY02_00760 PF13580 SIS domain GIY02_00765 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GIY02_00765 PF17203 Single cache domain 3 GIY02_00765 PF00989 PAS fold GIY02_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_00770 PF00072 Response regulator receiver domain GIY02_00775 PF02424 ApbE family GIY02_00780 PF14537 Cytochrome c3 GIY02_00780 PF00890 FAD binding domain GIY02_00790 PF00939 Sodium:sulfate symporter transmembrane region GIY02_00795 PF05683 Fumarase C-terminus GIY02_00795 PF05681 Fumarate hydratase (Fumerase) GIY02_00805 PF02627 Carboxymuconolactone decarboxylase family GIY02_00810 PF12146 Serine aminopeptidase, S33 GIY02_00815 PF00206 Lyase GIY02_00815 PF10397 Adenylosuccinate lyase C-terminus GIY02_00820 PF00108 Thiolase, N-terminal domain GIY02_00820 PF02803 Thiolase, C-terminal domain GIY02_00825 PF01144 Coenzyme A transferase GIY02_00830 PF01144 Coenzyme A transferase GIY02_00835 PF09339 IclR helix-turn-helix domain GIY02_00835 PF01614 Bacterial transcriptional regulator GIY02_00840 PF01713 Smr domain GIY02_00845 PF03466 LysR substrate binding domain GIY02_00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_00850 PF07687 Peptidase dimerisation domain GIY02_00850 PF01546 Peptidase family M20/M25/M40 GIY02_00855 PF01546 Peptidase family M20/M25/M40 GIY02_00860 PF03806 AbgT putative transporter family GIY02_00865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GIY02_00865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GIY02_00870 PF00325 Bacterial regulatory proteins, crp family GIY02_00870 PF00027 Cyclic nucleotide-binding domain GIY02_00875 PF00582 Universal stress protein family GIY02_00880 PF15930 Domain of unknown function GIY02_00885 PF02233 NAD(P) transhydrogenase beta subunit GIY02_00890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GIY02_00890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GIY02_00890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GIY02_00895 PF07338 Protein of unknown function (DUF1471) GIY02_00900 PF13520 Amino acid permease GIY02_00910 PF06942 GlpM protein GIY02_00915 PF00486 Transcriptional regulatory protein, C terminal GIY02_00915 PF00072 Response regulator receiver domain GIY02_00995 PF00589 Phage integrase family GIY02_00995 PF12167 Arm DNA-binding domain GIY02_01000 PF00512 His Kinase A (phospho-acceptor) domain GIY02_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_01000 PF00672 HAMP domain GIY02_01005 PF05472 DNA replication terminus site-binding protein (Ter protein) GIY02_01010 PF10415 Fumarase C C-terminus GIY02_01010 PF00206 Lyase GIY02_01020 PF05683 Fumarase C-terminus GIY02_01020 PF05681 Fumarate hydratase (Fumerase) GIY02_01025 PF01238 Phosphomannose isomerase type I GIY02_01030 PF06097 Bacterial protein of unknown function (DUF945) GIY02_01035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GIY02_01035 PF00356 Bacterial regulatory proteins, lacI family GIY02_01040 PF02378 Phosphotransferase system, EIIC GIY02_01040 PF00367 phosphotransferase system, EIIB GIY02_01045 PF00155 Aminotransferase class I and II GIY02_01050 PF14001 YdfZ protein GIY02_01055 PF04143 Sulphur transport GIY02_01060 PF01206 Sulfurtransferase TusA GIY02_01065 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_01065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GIY02_01070 PF00376 MerR family regulatory protein GIY02_01070 PF09278 MerR, DNA binding GIY02_01075 PF03180 NLPA lipoprotein GIY02_01080 PF07166 Protein of unknown function (DUF1398) GIY02_01085 PF00962 Adenosine/AMP deaminase GIY02_01090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GIY02_01090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GIY02_01100 PF00232 Glycosyl hydrolase family 1 GIY02_01105 PF05321 Haemolysin expression modulating protein GIY02_01110 PF10754 Protein of unknown function (DUF2569) GIY02_01115 PF02508 Rnf-Nqr subunit, membrane protein GIY02_01120 PF04060 Putative Fe-S cluster GIY02_01125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GIY02_01125 PF13375 RnfC Barrel sandwich hybrid domain GIY02_01125 PF10531 SLBB domain GIY02_01125 PF12838 4Fe-4S dicluster domain GIY02_01135 PF04205 FMN-binding domain GIY02_01140 PF02508 Rnf-Nqr subunit, membrane protein GIY02_01145 PF00730 HhH-GPD superfamily base excision DNA repair protein GIY02_01145 PF00633 Helix-hairpin-helix motif GIY02_01145 PF10576 Iron-sulfur binding domain of endonuclease III GIY02_01155 PF00854 POT family GIY02_01160 PF02798 Glutathione S-transferase, N-terminal domain GIY02_01160 PF00043 Glutathione S-transferase, C-terminal domain GIY02_01165 PF08543 Phosphomethylpyrimidine kinase GIY02_01170 PF00579 tRNA synthetases class I (W and Y) GIY02_01180 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme GIY02_01185 PF03702 Anhydro-N-acetylmuramic acid kinase GIY02_01190 PF05433 Glycine zipper 2TM domain GIY02_01195 PF17158 Membrane-associated sensor, integral membrane domain GIY02_01195 PF00990 Diguanylate cyclase, GGDEF domain GIY02_01200 PF01047 MarR family GIY02_01205 PF07869 Protein of unknown function (DUF1656) GIY02_01210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_01210 PF00529 HlyD membrane-fusion protein of T1SS GIY02_01215 PF04632 Fusaric acid resistance protein family GIY02_01220 PF00080 Copper/zinc superoxide dismutase (SODC) GIY02_01225 PF00248 Aldo/keto reductase family GIY02_01230 PF06945 Protein of unknown function (DUF1289) GIY02_01235 PF16925 Tetracyclin repressor-like, C-terminal domain GIY02_01235 PF00440 Bacterial regulatory proteins, tetR family GIY02_01240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GIY02_01245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GIY02_01250 PF00929 Exonuclease GIY02_01255 PF00462 Glutaredoxin GIY02_01260 PF00877 NlpC/P60 family GIY02_01265 PF12833 Helix-turn-helix domain GIY02_01265 PF06445 GyrI-like small molecule binding domain GIY02_01270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GIY02_01270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GIY02_01275 PF07690 Major Facilitator Superfamily GIY02_01285 PF00356 Bacterial regulatory proteins, lacI family GIY02_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_01290 PF03466 LysR substrate binding domain GIY02_01295 PF07690 Major Facilitator Superfamily GIY02_01305 PF00677 Lumazine binding domain GIY02_01310 PF01554 MatE GIY02_01315 PF03641 Possible lysine decarboxylase GIY02_01365 PF00484 Carbonic anhydrase GIY02_01370 PF07690 Major Facilitator Superfamily GIY02_01385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GIY02_01385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GIY02_01390 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_01395 PF07687 Peptidase dimerisation domain GIY02_01395 PF01546 Peptidase family M20/M25/M40 GIY02_01400 PF01979 Amidohydrolase family GIY02_01405 PF00696 Amino acid kinase family GIY02_01410 PF13478 XdhC Rossmann domain GIY02_01410 PF02625 XdhC and CoxI family GIY02_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_01440 PF03466 LysR substrate binding domain GIY02_01445 PF01144 Coenzyme A transferase GIY02_01450 PF01144 Coenzyme A transferase GIY02_01455 PF02803 Thiolase, C-terminal domain GIY02_01455 PF00108 Thiolase, N-terminal domain GIY02_01460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIY02_01460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GIY02_01470 PF00106 short chain dehydrogenase GIY02_01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_01480 PF03466 LysR substrate binding domain GIY02_01485 PF03306 Alpha-acetolactate decarboxylase GIY02_01490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_01490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_01490 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_01495 PF00106 short chain dehydrogenase GIY02_01500 PF01578 Cytochrome C assembly protein GIY02_01500 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GIY02_01505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GIY02_01505 PF00034 Cytochrome c GIY02_01510 PF05199 GMC oxidoreductase GIY02_01510 PF00732 GMC oxidoreductase GIY02_01515 PF13618 Gluconate 2-dehydrogenase subunit 3 GIY02_01525 PF08402 TOBE domain GIY02_01525 PF00005 ABC transporter GIY02_01530 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_01550 PF02615 Malate/L-lactate dehydrogenase GIY02_01555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GIY02_01555 PF01568 Molydopterin dinucleotide binding domain GIY02_01555 PF00384 Molybdopterin oxidoreductase GIY02_01580 PF00583 Acetyltransferase (GNAT) family GIY02_01595 PF13673 Acetyltransferase (GNAT) domain GIY02_01600 PF07883 Cupin domain GIY02_01600 PF01381 Helix-turn-helix GIY02_01605 PF00300 Histidine phosphatase superfamily (branch 1) GIY02_01625 PF00440 Bacterial regulatory proteins, tetR family GIY02_01630 PF01042 Endoribonuclease L-PSP GIY02_01655 PF00171 Aldehyde dehydrogenase family GIY02_01660 PF00701 Dihydrodipicolinate synthetase family GIY02_01665 PF00892 EamA-like transporter family GIY02_01670 PF00083 Sugar (and other) transporter GIY02_01675 PF01965 DJ-1/PfpI family GIY02_01680 PF01047 MarR family GIY02_01685 PF02441 Flavoprotein GIY02_01690 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GIY02_01700 PF01613 Flavin reductase like domain GIY02_01710 PF03466 LysR substrate binding domain GIY02_01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_01720 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GIY02_01725 PF07690 Major Facilitator Superfamily GIY02_01730 PF03466 LysR substrate binding domain GIY02_01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_01735 PF13280 WYL domain GIY02_01735 PF08279 HTH domain GIY02_01745 PF04463 Protein of unknown function (DUF523) GIY02_01750 PF07687 Peptidase dimerisation domain GIY02_01750 PF01546 Peptidase family M20/M25/M40 GIY02_01760 PF00005 ABC transporter GIY02_01765 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_01770 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_01785 PF01032 FecCD transport family GIY02_01790 PF01032 FecCD transport family GIY02_01795 PF00005 ABC transporter GIY02_01800 PF07715 TonB-dependent Receptor Plug Domain GIY02_01805 PF00005 ABC transporter GIY02_01810 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_01830 PF00296 Luciferase-like monooxygenase GIY02_01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_01835 PF03466 LysR substrate binding domain GIY02_01840 PF05995 Cysteine dioxygenase type I GIY02_01880 PF01488 Shikimate / quinate 5-dehydrogenase GIY02_01880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GIY02_01880 PF08501 Shikimate dehydrogenase substrate binding domain GIY02_01885 PF07690 Major Facilitator Superfamily GIY02_01900 PF10965 Protein of unknown function (DUF2767) GIY02_01905 PF02887 Pyruvate kinase, alpha/beta domain GIY02_01905 PF00224 Pyruvate kinase, barrel domain GIY02_01910 PF04728 Lipoprotein leucine-zipper GIY02_01915 PF01476 LysM domain GIY02_01915 PF17969 L,D-transpeptidase C-terminal domain GIY02_01915 PF03734 L,D-transpeptidase catalytic domain GIY02_01920 PF02657 Fe-S metabolism associated domain GIY02_01925 PF00266 Aminotransferase class-V GIY02_01930 PF01458 Uncharacterized protein family (UPF0051) GIY02_01935 PF00005 ABC transporter GIY02_01940 PF01458 Uncharacterized protein family (UPF0051) GIY02_01945 PF01521 Iron-sulphur cluster biosynthesis GIY02_01970 PF04226 Transglycosylase associated protein GIY02_01975 PF07411 Domain of unknown function (DUF1508) GIY02_01980 PF03061 Thioesterase superfamily GIY02_01985 PF02913 FAD linked oxidases, C-terminal domain GIY02_01985 PF01565 FAD binding domain GIY02_01985 PF13183 4Fe-4S dicluster domain GIY02_01990 PF01594 AI-2E family transporter GIY02_02000 PF00391 PEP-utilising enzyme, mobile domain GIY02_02000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GIY02_02000 PF02896 PEP-utilising enzyme, TIM barrel domain GIY02_02010 PF03618 Kinase/pyrophosphorylase GIY02_02015 PF00793 DAHP synthetase I family GIY02_02020 PF10636 Hemin uptake protein hemP GIY02_02025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GIY02_02030 PF00877 NlpC/P60 family GIY02_02035 PF00005 ABC transporter GIY02_02040 PF00255 Glutathione peroxidase GIY02_02045 PF03180 NLPA lipoprotein GIY02_02050 PF01032 FecCD transport family GIY02_02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_02060 PF03466 LysR substrate binding domain GIY02_02065 PF01266 FAD dependent oxidoreductase GIY02_02075 PF00216 Bacterial DNA-binding protein GIY02_02080 PF03483 B3/4 domain GIY02_02080 PF03147 Ferredoxin-fold anticodon binding domain GIY02_02080 PF01588 Putative tRNA binding domain GIY02_02080 PF03484 tRNA synthetase B5 domain GIY02_02080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GIY02_02085 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GIY02_02085 PF01409 tRNA synthetases class II core domain (F) GIY02_02095 PF00453 Ribosomal protein L20 GIY02_02105 PF00707 Translation initiation factor IF-3, C-terminal domain GIY02_02105 PF05198 Translation initiation factor IF-3, N-terminal domain GIY02_02110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GIY02_02110 PF03129 Anticodon binding domain GIY02_02110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GIY02_02110 PF02824 TGS domain GIY02_02115 PF04338 Protein of unknown function, DUF481 GIY02_02120 PF00294 pfkB family carbohydrate kinase GIY02_02125 PF11080 Endoribonuclease GhoS GIY02_02135 PF03544 Gram-negative bacterial TonB protein C-terminal GIY02_02140 PF03795 YCII-related domain GIY02_02150 PF13396 Phospholipase_D-nuclease N-terminal GIY02_02150 PF13091 PLD-like domain GIY02_02155 PF04269 Protein of unknown function, DUF440 GIY02_02160 PF00520 Ion transport protein GIY02_02160 PF00027 Cyclic nucleotide-binding domain GIY02_02165 PF00005 ABC transporter GIY02_02165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_02170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_02170 PF00005 ABC transporter GIY02_02175 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_02175 PF12911 N-terminal TM domain of oligopeptide transport permease C GIY02_02180 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_02185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_02190 PF01914 MarC family integral membrane protein GIY02_02195 PF00171 Aldehyde dehydrogenase family GIY02_02195 PF00465 Iron-containing alcohol dehydrogenase GIY02_02200 PF00265 Thymidine kinase GIY02_02205 PF00816 H-NS histone family GIY02_02210 PF00483 Nucleotidyl transferase GIY02_02215 PF00072 Response regulator receiver domain GIY02_02220 PF01734 Patatin-like phospholipase GIY02_02225 PF02810 SEC-C motif GIY02_02230 PF00551 Formyl transferase GIY02_02230 PF01842 ACT domain GIY02_02280 PF01037 Lrp/AsnC ligand binding domain GIY02_02290 PF02665 Nitrate reductase gamma subunit GIY02_02295 PF02613 Nitrate reductase delta subunit GIY02_02300 PF14711 Respiratory nitrate reductase beta C-terminal GIY02_02300 PF13247 4Fe-4S dicluster domain GIY02_02305 PF14710 Respiratory nitrate reductase alpha N-terminal GIY02_02305 PF01568 Molydopterin dinucleotide binding domain GIY02_02305 PF00384 Molybdopterin oxidoreductase GIY02_02310 PF07690 Major Facilitator Superfamily GIY02_02315 PF00672 HAMP domain GIY02_02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_02315 PF07730 Histidine kinase GIY02_02315 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GIY02_02320 PF00196 Bacterial regulatory proteins, luxR family GIY02_02320 PF00072 Response regulator receiver domain GIY02_02325 PF11924 Inverse autotransporter, beta-domain GIY02_02335 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_02335 PF13806 Rieske-like [2Fe-2S] domain GIY02_02335 PF18267 Rubredoxin NAD+ reductase C-terminal domain GIY02_02335 PF04324 BFD-like [2Fe-2S] binding domain GIY02_02335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GIY02_02335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GIY02_02340 PF00005 ABC transporter GIY02_02345 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_02355 PF08376 Nitrate and nitrite sensing GIY02_02355 PF03861 ANTAR domain GIY02_02360 PF02635 DsrE/DsrF-like family GIY02_02370 PF04752 ChaC-like protein GIY02_02375 PF13610 DDE domain GIY02_02380 PF06150 ChaB GIY02_02385 PF01699 Sodium/calcium exchanger protein GIY02_02390 PF00793 DAHP synthetase I family GIY02_02395 PF13369 Transglutaminase-like superfamily GIY02_02400 PF04247 Invasion gene expression up-regulator, SirB GIY02_02405 PF17827 PrmC N-terminal domain GIY02_02405 PF13847 Methyltransferase domain GIY02_02410 PF00472 RF-1 domain GIY02_02410 PF03462 PCRF domain GIY02_02415 PF01488 Shikimate / quinate 5-dehydrogenase GIY02_02415 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GIY02_02415 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GIY02_02420 PF03550 Outer membrane lipoprotein LolB GIY02_02430 PF14572 Phosphoribosyl synthetase-associated domain GIY02_02430 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GIY02_02435 PF00916 Sulfate permease family GIY02_02435 PF01740 STAS domain GIY02_02440 PF10762 Protein of unknown function (DUF2583) GIY02_02445 PF01195 Peptidyl-tRNA hydrolase GIY02_02450 PF01926 50S ribosome-binding GTPase GIY02_02450 PF06071 Protein of unknown function (DUF933) GIY02_02455 PF07274 Protein of unknown function (DUF1440) GIY02_02460 PF00296 Luciferase-like monooxygenase GIY02_02465 PF13847 Methyltransferase domain GIY02_02470 PF09857 Putative toxin of bacterial toxin-antitoxin pair GIY02_02475 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GIY02_02485 PF08546 Ketopantoate reductase PanE/ApbA C terminal GIY02_02485 PF02558 Ketopantoate reductase PanE/ApbA GIY02_02495 PF00873 AcrB/AcrD/AcrF family GIY02_02500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_02500 PF00529 HlyD membrane-fusion protein of T1SS GIY02_02505 PF12833 Helix-turn-helix domain GIY02_02515 PF13411 MerR HTH family regulatory protein GIY02_02520 PF08349 Protein of unknown function (DUF1722) GIY02_02525 PF01844 HNH endonuclease GIY02_02535 PF00180 Isocitrate/isopropylmalate dehydrogenase GIY02_02540 PF00849 RNA pseudouridylate synthase GIY02_02545 PF00293 NUDIX domain GIY02_02555 PF04356 Protein of unknown function (DUF489) GIY02_02560 PF00206 Lyase GIY02_02560 PF08328 Adenylosuccinate lyase C-terminal GIY02_02565 PF00072 Response regulator receiver domain GIY02_02565 PF00486 Transcriptional regulatory protein, C terminal GIY02_02570 PF08918 PhoQ Sensor GIY02_02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_02575 PF08007 Cupin superfamily protein GIY02_02585 PF07687 Peptidase dimerisation domain GIY02_02585 PF01546 Peptidase family M20/M25/M40 GIY02_02590 PF08402 TOBE domain GIY02_02590 PF00005 ABC transporter GIY02_02595 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_02600 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_02605 PF13416 Bacterial extracellular solute-binding protein GIY02_02610 PF13193 AMP-binding enzyme C-terminal domain GIY02_02610 PF00501 AMP-binding enzyme GIY02_02620 PF02779 Transketolase, pyrimidine binding domain GIY02_02620 PF02780 Transketolase, C-terminal domain GIY02_02620 PF00456 Transketolase, thiamine diphosphate binding domain GIY02_02625 PF00923 Transaldolase/Fructose-6-phosphate aldolase GIY02_02630 PF02502 Ribose/Galactose Isomerase GIY02_02635 PF03829 PTS system glucitol/sorbitol-specific IIA component GIY02_02650 PF03812 2-keto-3-deoxygluconate permease GIY02_02655 PF17042 Nucleotide-binding C-terminal domain GIY02_02655 PF07005 Sugar-binding N-terminal domain GIY02_02660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GIY02_02665 PF00121 Triosephosphate isomerase GIY02_02670 PF04198 Putative sugar-binding domain GIY02_02675 PF02146 Sir2 family GIY02_02680 PF00480 ROK family GIY02_02685 PF02687 FtsX-like permease family GIY02_02685 PF12704 MacB-like periplasmic core domain GIY02_02690 PF00005 ABC transporter GIY02_02695 PF12704 MacB-like periplasmic core domain GIY02_02695 PF02687 FtsX-like permease family GIY02_02700 PF17757 UvrB interaction domain GIY02_02700 PF03461 TRCF domain GIY02_02700 PF00271 Helicase conserved C-terminal domain GIY02_02700 PF00270 DEAD/DEAH box helicase GIY02_02700 PF02559 CarD-like/TRCF domain GIY02_02705 PF03734 L,D-transpeptidase catalytic domain GIY02_02705 PF17969 L,D-transpeptidase C-terminal domain GIY02_02705 PF01476 LysM domain GIY02_02710 PF07338 Protein of unknown function (DUF1471) GIY02_02715 PF00440 Bacterial regulatory proteins, tetR family GIY02_02725 PF05433 Glycine zipper 2TM domain GIY02_02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_02740 PF05728 Uncharacterised protein family (UPF0227) GIY02_02745 PF00933 Glycosyl hydrolase family 3 N terminal domain GIY02_02750 PF01636 Phosphotransferase enzyme family GIY02_02755 PF13036 Peptidoglycan-synthase activator LpoB GIY02_02760 PF07233 Protein of unknown function (DUF1425) GIY02_02765 PF01230 HIT domain GIY02_02770 PF02378 Phosphotransferase system, EIIC GIY02_02770 PF00367 phosphotransferase system, EIIB GIY02_02775 PF01026 TatD related DNase GIY02_02780 PF09115 DNA polymerase III, delta subunit, C terminal GIY02_02785 PF02223 Thymidylate kinase GIY02_02790 PF02618 YceG-like family GIY02_02795 PF01063 Amino-transferase class IV GIY02_02800 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_02800 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_02805 PF00550 Phosphopantetheine attachment site GIY02_02815 PF00698 Acyl transferase domain GIY02_02820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GIY02_02820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GIY02_02825 PF02504 Fatty acid synthesis protein GIY02_02830 PF01783 Ribosomal L32p protein family GIY02_02835 PF02620 Large ribosomal RNA subunit accumulation protein YceD GIY02_02840 PF02545 Maf-like protein GIY02_02845 PF00849 RNA pseudouridylate synthase GIY02_02845 PF01479 S4 domain GIY02_02850 PF10150 Ribonuclease E/G family GIY02_02850 PF12111 Polyribonucleotide phosphorylase C terminal GIY02_02850 PF00575 S1 RNA binding domain GIY02_02855 PF03466 LysR substrate binding domain GIY02_02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_02860 PF07690 Major Facilitator Superfamily GIY02_02865 PF03023 Lipid II flippase MurJ GIY02_02870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GIY02_02875 PF04337 Protein of unknown function, DUF480 GIY02_02880 PF13302 Acetyltransferase (GNAT) domain GIY02_02885 PF07690 Major Facilitator Superfamily GIY02_02890 PF07273 Protein of unknown function (DUF1439) GIY02_02895 PF01979 Amidohydrolase family GIY02_02900 PF06183 DinI-like family GIY02_02905 PF13991 BssS protein family GIY02_02910 PF01266 FAD dependent oxidoreductase GIY02_02915 PF10968 Protein of unknown function (DUF2770) GIY02_02925 PF03279 Bacterial lipid A biosynthesis acyltransferase GIY02_02930 PF07690 Major Facilitator Superfamily GIY02_02935 PF13984 MsyB protein GIY02_02940 PF07119 Protein of unknown function (DUF1375) GIY02_02945 PF00535 Glycosyl transferase family 2 GIY02_02950 PF04349 Periplasmic glucan biosynthesis protein, MdoG GIY02_02955 PF01757 Acyltransferase family GIY02_02960 PF01661 Macro domain GIY02_02975 PF06496 Protein of unknown function (DUF1097) GIY02_02980 PF02613 Nitrate reductase delta subunit GIY02_02985 PF02811 PHP domain GIY02_02990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIY02_03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_03005 PF03466 LysR substrate binding domain GIY02_03010 PF02678 Pirin GIY02_03010 PF05726 Pirin C-terminal cupin domain GIY02_03015 PF00857 Isochorismatase family GIY02_03025 PF02562 PhoH-like protein GIY02_03030 PF04261 Dyp-type peroxidase family GIY02_03035 PF09375 Imelysin GIY02_03035 PF13473 Cupredoxin-like domain GIY02_03040 PF03239 Iron permease FTR1 family GIY02_03045 PF07670 Nucleoside recognition GIY02_03045 PF01773 Na+ dependent nucleoside transporter N-terminus GIY02_03045 PF07662 Na+ dependent nucleoside transporter C-terminus GIY02_03055 PF01594 AI-2E family transporter GIY02_03060 PF00474 Sodium:solute symporter family GIY02_03065 PF14850 DNA-binding domain of Proline dehydrogenase GIY02_03065 PF00171 Aldehyde dehydrogenase family GIY02_03065 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GIY02_03065 PF01619 Proline dehydrogenase GIY02_03075 PF00440 Bacterial regulatory proteins, tetR family GIY02_03075 PF08362 YcdC-like protein, C-terminal region GIY02_03085 PF00857 Isochorismatase family GIY02_03090 PF01042 Endoribonuclease L-PSP GIY02_03095 PF00561 alpha/beta hydrolase fold GIY02_03100 PF00881 Nitroreductase family GIY02_03105 PF01613 Flavin reductase like domain GIY02_03110 PF00860 Permease family GIY02_03120 PF10685 Stress-induced bacterial acidophilic repeat motif GIY02_03125 PF03358 NADPH-dependent FMN reductase GIY02_03130 PF13993 YccJ-like protein GIY02_03135 PF00328 Histidine phosphatase superfamily (branch 2) GIY02_03180 PF00324 Amino acid permease GIY02_03185 PF00120 Glutamine synthetase, catalytic domain GIY02_03190 PF07722 Peptidase C26 GIY02_03195 PF07883 Cupin domain GIY02_03195 PF01381 Helix-turn-helix GIY02_03200 PF00171 Aldehyde dehydrogenase family GIY02_03205 PF01266 FAD dependent oxidoreductase GIY02_03210 PF00202 Aminotransferase class-III GIY02_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_03215 PF03466 LysR substrate binding domain GIY02_03220 PF00180 Isocitrate/isopropylmalate dehydrogenase GIY02_03225 PF02028 BCCT, betaine/carnitine/choline family transporter GIY02_03230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GIY02_03230 PF00355 Rieske [2Fe-2S] domain GIY02_03235 PF00171 Aldehyde dehydrogenase family GIY02_03240 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_03240 PF00970 Oxidoreductase FAD-binding domain GIY02_03240 PF00175 Oxidoreductase NAD-binding domain GIY02_03245 PF00005 ABC transporter GIY02_03250 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_03265 PF03544 Gram-negative bacterial TonB protein C-terminal GIY02_03270 PF07715 TonB-dependent Receptor Plug Domain GIY02_03270 PF00593 TonB dependent receptor GIY02_03280 PF04539 Sigma-70 region 3 GIY02_03280 PF04542 Sigma-70 region 2 GIY02_03280 PF04545 Sigma-70, region 4 GIY02_03285 PF00700 Bacterial flagellin C-terminal helical region GIY02_03285 PF00669 Bacterial flagellin N-terminal helical region GIY02_03295 PF02465 Flagellar hook-associated protein 2 N-terminus GIY02_03295 PF07195 Flagellar hook-associated protein 2 C-terminus GIY02_03300 PF02561 Flagellar protein FliS GIY02_03305 PF05400 Flagellar protein FliT GIY02_03325 PF02049 Flagellar hook-basal body complex protein FliE GIY02_03330 PF01514 Secretory protein of YscJ/FliF family GIY02_03330 PF08345 Flagellar M-ring protein C-terminal GIY02_03335 PF01706 FliG C-terminal domain GIY02_03335 PF14841 FliG middle domain GIY02_03335 PF14842 FliG N-terminal domain GIY02_03340 PF02108 Flagellar assembly protein FliH GIY02_03345 PF18269 T3SS EscN ATPase C-terminal domain GIY02_03345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GIY02_03350 PF02050 Flagellar FliJ protein GIY02_03355 PF02120 Flagellar hook-length control protein FliK GIY02_03360 PF03748 Flagellar basal body-associated protein FliL GIY02_03365 PF02154 Flagellar motor switch protein FliM GIY02_03365 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GIY02_03370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GIY02_03370 PF16973 Flagellar motor switch protein FliN N-terminal GIY02_03375 PF04347 Flagellar biosynthesis protein, FliO GIY02_03380 PF00813 FliP family GIY02_03385 PF01313 Bacterial export proteins, family 3 GIY02_03390 PF01311 Bacterial export proteins, family 1 GIY02_03400 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GIY02_03400 PF12833 Helix-turn-helix domain GIY02_03410 PF03466 LysR substrate binding domain GIY02_03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_03420 PF01842 ACT domain GIY02_03420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIY02_03420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GIY02_03425 PF03737 Aldolase/RraA GIY02_03430 PF09339 IclR helix-turn-helix domain GIY02_03430 PF01614 Bacterial transcriptional regulator GIY02_03435 PF07690 Major Facilitator Superfamily GIY02_03440 PF07690 Major Facilitator Superfamily GIY02_03450 PF07690 Major Facilitator Superfamily GIY02_03470 PF00669 Bacterial flagellin N-terminal helical region GIY02_03475 PF00460 Flagella basal body rod protein GIY02_03475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GIY02_03480 PF10135 Rod binding protein GIY02_03480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GIY02_03485 PF02119 Flagellar P-ring protein GIY02_03490 PF02107 Flagellar L-ring protein GIY02_03495 PF00460 Flagella basal body rod protein GIY02_03495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GIY02_03500 PF00460 Flagella basal body rod protein GIY02_03500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GIY02_03515 PF00583 Acetyltransferase (GNAT) family GIY02_03530 PF13861 FlgD Tudor-like domain GIY02_03530 PF13860 FlgD Ig-like domain GIY02_03530 PF03963 Flagellar hook capping protein - N-terminal region GIY02_03535 PF00460 Flagella basal body rod protein GIY02_03535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GIY02_03540 PF00460 Flagella basal body rod protein GIY02_03545 PF17656 FlgA N-terminal domain GIY02_03545 PF13144 Chaperone for flagella basal body P-ring formation GIY02_03550 PF04316 Anti-sigma-28 factor, FlgM GIY02_03555 PF05130 FlgN protein GIY02_03570 PF01312 FlhB HrpN YscU SpaS Family GIY02_03575 PF04344 Chemotaxis phosphatase, CheZ GIY02_03580 PF00072 Response regulator receiver domain GIY02_03585 PF00072 Response regulator receiver domain GIY02_03585 PF01339 CheB methylesterase GIY02_03590 PF01739 CheR methyltransferase, SAM binding domain GIY02_03590 PF03705 CheR methyltransferase, all-alpha domain GIY02_03595 PF00672 HAMP domain GIY02_03595 PF02203 Tar ligand binding domain homologue GIY02_03595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GIY02_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GIY02_03600 PF00672 HAMP domain GIY02_03600 PF02203 Tar ligand binding domain homologue GIY02_03605 PF01584 CheW-like domain GIY02_03610 PF01627 Hpt domain GIY02_03610 PF01584 CheW-like domain GIY02_03610 PF09078 CheY binding GIY02_03610 PF02895 Signal transducing histidine kinase, homodimeric domain GIY02_03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_03615 PF13677 Membrane MotB of proton-channel complex MotA/MotB GIY02_03615 PF00691 OmpA family GIY02_03620 PF01618 MotA/TolQ/ExbB proton channel family GIY02_03625 PF05280 Flagellar transcriptional activator (FlhC) GIY02_03630 PF05247 Flagellar transcriptional activator (FlhD) GIY02_03635 PF00294 pfkB family carbohydrate kinase GIY02_03640 PF02378 Phosphotransferase system, EIIC GIY02_03640 PF00367 phosphotransferase system, EIIB GIY02_03645 PF08244 Glycosyl hydrolases family 32 C terminal GIY02_03645 PF00251 Glycosyl hydrolases family 32 N-terminal domain GIY02_03650 PF00356 Bacterial regulatory proteins, lacI family GIY02_03650 PF13407 Periplasmic binding protein domain GIY02_03655 PF02560 Cyanate lyase C-terminal domain GIY02_03660 PF00484 Carbonic anhydrase GIY02_03665 PF03466 LysR substrate binding domain GIY02_03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_03675 PF07995 Glucose / Sorbosone dehydrogenase GIY02_03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_03680 PF03466 LysR substrate binding domain GIY02_03700 PF00583 Acetyltransferase (GNAT) family GIY02_03715 PF01027 Inhibitor of apoptosis-promoting Bax1 GIY02_03720 PF04358 DsrC like protein GIY02_03725 PF00708 Acylphosphatase GIY02_03730 PF10672 S-adenosylmethionine-dependent methyltransferase GIY02_03730 PF17785 PUA-like domain GIY02_03735 PF08755 Hemimethylated DNA-binding protein YccV like GIY02_03755 PF00664 ABC transporter transmembrane region GIY02_03755 PF03412 Peptidase C39 family GIY02_03755 PF00005 ABC transporter GIY02_03770 PF13380 CoA binding domain GIY02_03775 PF02142 MGS-like domain GIY02_03780 PF00580 UvrD/REP helicase N-terminal domain GIY02_03780 PF12462 DNA helicase IV / RNA helicase N terminal GIY02_03780 PF13361 UvrD-like helicase C-terminal domain GIY02_03785 PF03733 Inner membrane component domain GIY02_03790 PF12805 FUSC-like inner membrane protein yccS GIY02_03795 PF04993 TfoX N-terminal domain GIY02_03795 PF04994 TfoX C-terminal domain GIY02_03800 PF03846 Cell division inhibitor SulA GIY02_03805 PF00691 OmpA family GIY02_03805 PF01389 OmpA-like transmembrane domain GIY02_03810 PF06303 MatP N-terminal domain GIY02_03810 PF17414 MatP C-terminal ribbon-helix-helix domain GIY02_03815 PF05362 Lon protease (S16) C-terminal proteolytic domain GIY02_03815 PF13654 AAA domain GIY02_03820 PF07977 FabA-like domain GIY02_03825 PF04957 Ribosome modulation factor GIY02_03830 PF03886 ABC-type transport auxiliary lipoprotein component GIY02_03835 PF02470 MlaD protein GIY02_03840 PF04403 Paraquat-inducible protein A GIY02_03845 PF12848 ABC transporter GIY02_03845 PF16326 ABC transporter C-terminal domain GIY02_03845 PF00005 ABC transporter GIY02_03850 PF01170 Putative RNA methylase family UPF0020 GIY02_03850 PF02926 THUMP domain GIY02_03850 PF10672 S-adenosylmethionine-dependent methyltransferase GIY02_03855 PF03473 MOSC domain GIY02_03855 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_03855 PF03476 MOSC N-terminal beta barrel domain GIY02_03860 PF07126 Cell-division protein ZapC GIY02_03865 PF01180 Dihydroorotate dehydrogenase GIY02_03870 PF03358 NADPH-dependent FMN reductase GIY02_03875 PF09084 NMT1/THI5 like GIY02_03880 PF00296 Luciferase-like monooxygenase GIY02_03885 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_03890 PF00005 ABC transporter GIY02_03895 PF11940 Domain of unknown function (DUF3458) Ig-like fold GIY02_03895 PF01433 Peptidase family M1 domain GIY02_03895 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GIY02_03900 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GIY02_03900 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GIY02_03905 PF00152 tRNA synthetases class II (D, K and N) GIY02_03905 PF01336 OB-fold nucleic acid binding domain GIY02_03910 PF00267 Gram-negative porin GIY02_03915 PF00155 Aminotransferase class I and II GIY02_03920 PF00753 Metallo-beta-lactamase superfamily GIY02_03925 PF05951 Bacterial protein of unknown function (DUF882) GIY02_03930 PF01471 Putative peptidoglycan binding domain GIY02_03930 PF03734 L,D-transpeptidase catalytic domain GIY02_03940 PF04288 MukE-like family GIY02_03945 PF03882 MukF winged-helix domain GIY02_03945 PF17193 MukF C-terminal domain GIY02_03945 PF17192 MukF middle domain GIY02_03955 PF02698 DUF218 domain GIY02_03960 PF01636 Phosphotransferase enzyme family GIY02_03965 PF02348 Cytidylyltransferase GIY02_03970 PF03966 Trm112p-like protein GIY02_03975 PF06224 Winged helix DNA-binding domain GIY02_03980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GIY02_03985 PF00005 ABC transporter GIY02_03985 PF00664 ABC transporter transmembrane region GIY02_03990 PF00753 Metallo-beta-lactamase superfamily GIY02_03990 PF03772 Competence protein GIY02_03995 PF00216 Bacterial DNA-binding protein GIY02_04000 PF00575 S1 RNA binding domain GIY02_04005 PF02224 Cytidylate kinase GIY02_04010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GIY02_04015 PF00266 Aminotransferase class-V GIY02_04025 PF18381 YcaO cyclodehydratase C-terminal domain GIY02_04025 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GIY02_04030 PF01226 Formate/nitrite transporter GIY02_04035 PF02901 Pyruvate formate lyase-like GIY02_04035 PF01228 Glycine radical GIY02_04040 PF04055 Radical SAM superfamily GIY02_04045 PF07690 Major Facilitator Superfamily GIY02_04050 PF04976 DMSO reductase anchor subunit (DmsC) GIY02_04055 PF12800 4Fe-4S binding domain GIY02_04055 PF13247 4Fe-4S dicluster domain GIY02_04060 PF01568 Molydopterin dinucleotide binding domain GIY02_04060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GIY02_04060 PF00384 Molybdopterin oxidoreductase GIY02_04065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GIY02_04065 PF02403 Seryl-tRNA synthetase N-terminal domain GIY02_04070 PF16193 AAA C-terminal domain GIY02_04070 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_04070 PF12002 MgsA AAA+ ATPase C terminal GIY02_04080 PF09397 Ftsk gamma domain GIY02_04080 PF17854 FtsK alpha domain GIY02_04080 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GIY02_04080 PF01580 FtsK/SpoIIIE family GIY02_04085 PF01037 Lrp/AsnC ligand binding domain GIY02_04090 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_04095 PF00005 ABC transporter GIY02_04095 PF00664 ABC transporter transmembrane region GIY02_04100 PF00664 ABC transporter transmembrane region GIY02_04100 PF00005 ABC transporter GIY02_04105 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GIY02_04110 PF01176 Translation initiation factor 1A / IF-1 GIY02_04115 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_04115 PF17871 AAA lid domain GIY02_04115 PF10431 C-terminal, D2-small domain, of ClpB protein GIY02_04115 PF02861 Clp amino terminal domain, pathogenicity island component GIY02_04115 PF07724 AAA domain (Cdc48 subfamily) GIY02_04120 PF02617 ATP-dependent Clp protease adaptor protein ClpS GIY02_04125 PF00313 'Cold-shock' DNA-binding domain GIY02_04130 PF00005 ABC transporter GIY02_04130 PF02687 FtsX-like permease family GIY02_04130 PF12704 MacB-like periplasmic core domain GIY02_04135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_04140 PF11398 Protein of unknown function (DUF2813) GIY02_04145 PF00230 Major intrinsic protein GIY02_04150 PF03956 Lysine exporter LysO GIY02_04160 PF00970 Oxidoreductase FAD-binding domain GIY02_04160 PF00175 Oxidoreductase NAD-binding domain GIY02_04160 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_04175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_04175 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_04175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_04180 PF01212 Beta-eliminating lyase GIY02_04185 PF11066 Protein of unknown function (DUF2867) GIY02_04185 PF13460 NAD(P)H-binding GIY02_04190 PF01370 NAD dependent epimerase/dehydratase family GIY02_04195 PF01510 N-acetylmuramoyl-L-alanine amidase GIY02_04200 PF01590 GAF domain GIY02_04200 PF00990 Diguanylate cyclase, GGDEF domain GIY02_04200 PF00360 Phytochrome region GIY02_04200 PF00563 EAL domain GIY02_04205 PF07338 Protein of unknown function (DUF1471) GIY02_04210 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GIY02_04215 PF12883 Protein of unknown function (DUF3828) GIY02_04220 PF00005 ABC transporter GIY02_04225 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_04230 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04235 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04240 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_04245 PF00512 His Kinase A (phospho-acceptor) domain GIY02_04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_04245 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB GIY02_04245 PF08448 PAS fold GIY02_04245 PF00672 HAMP domain GIY02_04250 PF00486 Transcriptional regulatory protein, C terminal GIY02_04250 PF00072 Response regulator receiver domain GIY02_04255 PF05958 tRNA (Uracil-5-)-methyltransferase GIY02_04260 PF10767 Protein of unknown function (DUF2593) GIY02_04265 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04270 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04275 PF08402 TOBE domain GIY02_04275 PF00005 ABC transporter GIY02_04280 PF13416 Bacterial extracellular solute-binding protein GIY02_04285 PF10722 Putative bacterial sensory transduction regulator GIY02_04290 PF18030 RimK PreATP-grasp domain GIY02_04290 PF08443 RimK-like ATP-grasp domain GIY02_04295 PF00881 Nitroreductase family GIY02_04300 PF07214 Protein of unknown function (DUF1418) GIY02_04305 PF00462 Glutaredoxin GIY02_04310 PF11045 Putative inner membrane protein of Enterobacteriaceae GIY02_04315 PF02080 TrkA-C domain GIY02_04315 PF06826 Predicted Permease Membrane Region GIY02_04330 PF00106 short chain dehydrogenase GIY02_04335 PF00440 Bacterial regulatory proteins, tetR family GIY02_04350 PF07690 Major Facilitator Superfamily GIY02_04360 PF01569 PAP2 superfamily GIY02_04365 PF00455 DeoR C terminal sensor domain GIY02_04365 PF08220 DeoR-like helix-turn-helix domain GIY02_04370 PF07943 Penicillin-binding protein 5, C-terminal domain GIY02_04370 PF00768 D-alanyl-D-alanine carboxypeptidase GIY02_04375 PF13417 Glutathione S-transferase, N-terminal domain GIY02_04375 PF00043 Glutathione S-transferase, C-terminal domain GIY02_04380 PF07995 Glucose / Sorbosone dehydrogenase GIY02_04385 PF10799 Biofilm formation protein (YliH/bssR) GIY02_04390 PF18693 TRAM domain GIY02_04390 PF00919 Uncharacterized protein family UPF0004 GIY02_04390 PF04055 Radical SAM superfamily GIY02_04395 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04395 PF12911 N-terminal TM domain of oligopeptide transport permease C GIY02_04400 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_04410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_04410 PF00005 ABC transporter GIY02_04415 PF01112 Asparaginase GIY02_04420 PF03453 MoeA N-terminal region (domain I and II) GIY02_04420 PF03454 MoeA C-terminal region (domain IV) GIY02_04420 PF00994 Probable molybdopterin binding domain GIY02_04425 PF00899 ThiF family GIY02_04430 PF04055 Radical SAM superfamily GIY02_04445 PF07350 Protein of unknown function (DUF1479) GIY02_04450 PF00356 Bacterial regulatory proteins, lacI family GIY02_04455 PF07690 Major Facilitator Superfamily GIY02_04460 PF13802 Galactose mutarotase-like GIY02_04460 PF01055 Glycosyl hydrolases family 31 GIY02_04460 PF17137 Domain of unknown function (DUF5110) GIY02_04460 PF16338 Domain of unknown function (DUF4968) GIY02_04465 PF00005 ABC transporter GIY02_04465 PF12848 ABC transporter GIY02_04475 PF03734 L,D-transpeptidase catalytic domain GIY02_04475 PF17969 L,D-transpeptidase C-terminal domain GIY02_04480 PF07702 UTRA domain GIY02_04480 PF00392 Bacterial regulatory proteins, gntR family GIY02_04485 PF00232 Glycosyl hydrolase family 1 GIY02_04490 PF00248 Aldo/keto reductase family GIY02_04495 PF03600 Citrate transporter GIY02_04500 PF02742 Iron dependent repressor, metal binding and dimerisation domain GIY02_04500 PF01325 Iron dependent repressor, N-terminal DNA binding domain GIY02_04515 PF13505 Outer membrane protein beta-barrel domain GIY02_04520 PF00892 EamA-like transporter family GIY02_04525 PF00210 Ferritin-like domain GIY02_04530 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_04535 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04540 PF00005 ABC transporter GIY02_04545 PF00924 Mechanosensitive ion channel GIY02_04550 PF05971 RNA methyltransferase GIY02_04555 PF01613 Flavin reductase like domain GIY02_04560 PF07338 Protein of unknown function (DUF1471) GIY02_04565 PF01258 Prokaryotic dksA/traR C4-type zinc finger GIY02_04570 PF07338 Protein of unknown function (DUF1471) GIY02_04575 PF02885 Glycosyl transferase family, helical bundle domain GIY02_04580 PF06733 DEAD_2 GIY02_04580 PF13307 Helicase C-terminal domain GIY02_04585 PF00271 Helicase conserved C-terminal domain GIY02_04585 PF00270 DEAD/DEAH box helicase GIY02_04590 PF09209 Tetracyclin repressor-like, C-terminal domain GIY02_04590 PF00440 Bacterial regulatory proteins, tetR family GIY02_04595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_04600 PF00005 ABC transporter GIY02_04615 PF11076 Putative inner membrane protein YbhQ GIY02_04620 PF03372 Endonuclease/Exonuclease/phosphatase family GIY02_04625 PF13091 PLD-like domain GIY02_04630 PF03706 Lysylphosphatidylglycerol synthase TM region GIY02_04635 PF01027 Inhibitor of apoptosis-promoting Bax1 GIY02_04640 PF02391 MoaE protein GIY02_04645 PF02597 ThiS family GIY02_04650 PF01967 MoaC family GIY02_04655 PF00994 Probable molybdopterin binding domain GIY02_04660 PF04055 Radical SAM superfamily GIY02_04660 PF06463 Molybdenum Cofactor Synthesis C GIY02_04665 PF01933 Uncharacterised protein family UPF0052 GIY02_04670 PF08019 Phosphoethanolamine transferase EptA/EptB GIY02_04670 PF00884 Sulfatase GIY02_04675 PF00072 Response regulator receiver domain GIY02_04675 PF00486 Transcriptional regulatory protein, C terminal GIY02_04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_04680 PF00512 His Kinase A (phospho-acceptor) domain GIY02_04690 PF12344 Ultra-violet resistance protein B GIY02_04690 PF17757 UvrB interaction domain GIY02_04690 PF04851 Type III restriction enzyme, res subunit GIY02_04690 PF00271 Helicase conserved C-terminal domain GIY02_04690 PF02151 UvrB/uvrC motif GIY02_04700 PF08241 Methyltransferase domain GIY02_04705 PF00155 Aminotransferase class I and II GIY02_04710 PF04055 Radical SAM superfamily GIY02_04710 PF06968 Biotin and Thiamin Synthesis associated domain GIY02_04715 PF00202 Aminotransferase class-III GIY02_04720 PF01161 Phosphatidylethanolamine-binding protein GIY02_04725 PF00324 Amino acid permease GIY02_04730 PF00221 Aromatic amino acid lyase GIY02_04735 PF17391 Urocanase N-terminal domain GIY02_04735 PF01175 Urocanase Rossmann-like domain GIY02_04735 PF17392 Urocanase C-terminal domain GIY02_04740 PF07702 UTRA domain GIY02_04740 PF00392 Bacterial regulatory proteins, gntR family GIY02_04745 PF00491 Arginase family GIY02_04750 PF01979 Amidohydrolase family GIY02_04755 PF01095 Pectinesterase GIY02_04765 PF04542 Sigma-70 region 2 GIY02_04765 PF08281 Sigma-70, region 4 GIY02_04775 PF08212 Lipocalin-like domain GIY02_04790 PF13411 MerR HTH family regulatory protein GIY02_04795 PF00563 EAL domain GIY02_04795 PF04940 Sensors of blue-light using FAD GIY02_04800 PF10798 Biofilm development protein YmgB/AriR GIY02_04810 PF10798 Biofilm development protein YmgB/AriR GIY02_04815 PF10282 Lactonase, 7-bladed beta-propeller GIY02_04825 PF00005 ABC transporter GIY02_04825 PF03459 TOBE domain GIY02_04830 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_04840 PF10766 Multidrug efflux pump-associated protein AcrZ GIY02_04845 PF03459 TOBE domain GIY02_04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_04850 PF00005 ABC transporter GIY02_04855 PF16363 GDP-mannose 4,6 dehydratase GIY02_04860 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GIY02_04860 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GIY02_04865 PF10509 Galactokinase galactose-binding signature GIY02_04865 PF08544 GHMP kinases C terminal GIY02_04865 PF00288 GHMP kinases N terminal domain GIY02_04870 PF01263 Aldose 1-epimerase GIY02_04875 PF00300 Histidine phosphatase superfamily (branch 1) GIY02_04880 PF00793 DAHP synthetase I family GIY02_04885 PF13985 YbgS-like protein GIY02_04890 PF01545 Cation efflux family GIY02_04895 PF04973 Nicotinamide mononucleotide transporter GIY02_04900 PF02445 Quinolinate synthetase A protein GIY02_04940 PF16331 TolA binding protein trimerisation GIY02_04940 PF13174 Tetratricopeptide repeat GIY02_04945 PF00691 OmpA family GIY02_04950 PF07676 WD40-like Beta Propeller Repeat GIY02_04950 PF04052 TolB amino-terminal domain GIY02_04955 PF06519 TolA C-terminal GIY02_04960 PF02472 Biopolymer transport protein ExbD/TolR GIY02_04965 PF01618 MotA/TolQ/ExbB proton channel family GIY02_04970 PF03061 Thioesterase superfamily GIY02_04975 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GIY02_04980 PF08173 Membrane bound YbgT-like protein GIY02_04985 PF02322 Cytochrome bd terminal oxidase subunit II GIY02_04990 PF01654 Cytochrome bd terminal oxidase subunit I GIY02_05000 PF02629 CoA binding domain GIY02_05000 PF00549 CoA-ligase GIY02_05010 PF00364 Biotin-requiring enzyme GIY02_05010 PF02817 e3 binding domain GIY02_05010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GIY02_05015 PF00676 Dehydrogenase E1 component GIY02_05015 PF16078 2-oxoglutarate dehydrogenase N-terminus GIY02_05015 PF16870 2-oxoglutarate dehydrogenase C-terminal GIY02_05015 PF02779 Transketolase, pyrimidine binding domain GIY02_05020 PF13085 2Fe-2S iron-sulfur cluster binding domain GIY02_05025 PF02910 Fumarate reductase flavoprotein C-term GIY02_05025 PF00890 FAD binding domain GIY02_05030 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GIY02_05035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GIY02_05040 PF00285 Citrate synthase, C-terminal domain GIY02_05045 PF06827 Zinc finger found in FPG and IleRS GIY02_05045 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GIY02_05045 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GIY02_05050 PF01470 Pyroglutamyl peptidase GIY02_05065 PF03746 LamB/YcsF family GIY02_05070 PF02626 Carboxyltransferase domain, subdomain A and B GIY02_05075 PF02682 Carboxyltransferase domain, subdomain C and D GIY02_05080 PF01784 NIF3 (NGG1p interacting factor 3) GIY02_05085 PF00854 POT family GIY02_05090 PF00875 DNA photolyase GIY02_05090 PF03441 FAD binding domain of DNA photolyase GIY02_05095 PF10725 Protein of unknown function (DUF2517) GIY02_05100 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) GIY02_05105 PF03814 Potassium-transporting ATPase A subunit GIY02_05115 PF02669 K+-transporting ATPase, c chain GIY02_05120 PF13492 GAF domain GIY02_05120 PF13493 Domain of unknown function (DUF4118) GIY02_05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_05120 PF00512 His Kinase A (phospho-acceptor) domain GIY02_05120 PF02702 Osmosensitive K+ channel His kinase sensor domain GIY02_05125 PF00486 Transcriptional regulatory protein, C terminal GIY02_05125 PF00072 Response regulator receiver domain GIY02_05130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GIY02_05130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GIY02_05130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GIY02_05130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GIY02_05135 PF03925 SeqA protein C-terminal domain GIY02_05135 PF17206 SeqA protein N-terminal domain GIY02_05140 PF12697 Alpha/beta hydrolase family GIY02_05145 PF01402 Ribbon-helix-helix protein, copG family GIY02_05150 PF00258 Flavodoxin GIY02_05155 PF01475 Ferric uptake regulator family GIY02_05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_05160 PF03466 LysR substrate binding domain GIY02_05165 PF00890 FAD binding domain GIY02_05165 PF14537 Cytochrome c3 GIY02_05175 PF07690 Major Facilitator Superfamily GIY02_05180 PF13982 YbfN-like lipoprotein GIY02_05185 PF03573 outer membrane porin, OprD family GIY02_05195 PF00749 tRNA synthetases class I (E and Q), catalytic domain GIY02_05195 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GIY02_05200 PF02378 Phosphotransferase system, EIIC GIY02_05200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GIY02_05200 PF00367 phosphotransferase system, EIIB GIY02_05205 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GIY02_05210 PF01979 Amidohydrolase family GIY02_05215 PF01047 MarR family GIY02_05215 PF00480 ROK family GIY02_05225 PF00733 Asparagine synthase GIY02_05225 PF13537 Glutamine amidotransferase domain GIY02_05265 PF01494 FAD binding domain GIY02_05270 PF00919 Uncharacterized protein family UPF0004 GIY02_05270 PF01938 TRAM domain GIY02_05270 PF04055 Radical SAM superfamily GIY02_05275 PF02562 PhoH-like protein GIY02_05280 PF02130 Uncharacterized protein family UPF0054 GIY02_05285 PF03471 Transporter associated domain GIY02_05285 PF00571 CBS domain GIY02_05290 PF00795 Carbon-nitrogen hydrolase GIY02_05295 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_05300 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_05305 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_05310 PF00005 ABC transporter GIY02_05315 PF08479 POTRA domain, ShlB-type GIY02_05315 PF17287 POTRA domain GIY02_05315 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GIY02_05320 PF14436 Bacterial EndoU nuclease GIY02_05320 PF05594 Haemagluttinin repeat GIY02_05320 PF13332 Hemagglutinin repeat GIY02_05320 PF05860 haemagglutination activity domain GIY02_05320 PF04829 Pre-toxin domain with VENN motif GIY02_05325 PF07295 Zinc-ribbon containing domain GIY02_05330 PF13603 Leucyl-tRNA synthetase, Domain 2 GIY02_05330 PF08264 Anticodon-binding domain of tRNA GIY02_05330 PF00133 tRNA synthetases class I (I, L, M and V) GIY02_05335 PF04390 Lipopolysaccharide-assembly GIY02_05340 PF06144 DNA polymerase III, delta subunit GIY02_05340 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GIY02_05345 PF01467 Cytidylyltransferase-like GIY02_05350 PF00300 Histidine phosphatase superfamily (branch 1) GIY02_05360 PF02590 Predicted SPOUT methyltransferase GIY02_05365 PF00905 Penicillin binding protein transpeptidase domain GIY02_05365 PF03717 Penicillin-binding Protein dimerisation domain GIY02_05370 PF01098 Cell cycle protein GIY02_05375 PF03330 Lytic transglycolase GIY02_05375 PF05036 Sporulation related domain GIY02_05380 PF00768 D-alanyl-D-alanine carboxypeptidase GIY02_05380 PF07943 Penicillin-binding protein 5, C-terminal domain GIY02_05385 PF04359 Protein of unknown function (DUF493) GIY02_05390 PF03099 Biotin/lipoate A/B protein ligase family GIY02_05395 PF03466 LysR substrate binding domain GIY02_05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_05400 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GIY02_05400 PF04055 Radical SAM superfamily GIY02_05405 PF02416 mttA/Hcf106 family GIY02_05410 PF00795 Carbon-nitrogen hydrolase GIY02_05415 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GIY02_05420 PF00313 'Cold-shock' DNA-binding domain GIY02_05425 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP GIY02_05430 PF03606 C4-dicarboxylate anaerobic carrier GIY02_05435 PF00445 Ribonuclease T2 family GIY02_05440 PF01272 Transcription elongation factor, GreA/GreB, C-term GIY02_05440 PF14760 Rnk N-terminus GIY02_05445 PF00582 Universal stress protein family GIY02_05450 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_05450 PF13192 Thioredoxin domain GIY02_05455 PF00578 AhpC/TSA family GIY02_05455 PF10417 C-terminal domain of 1-Cys peroxiredoxin GIY02_05460 PF13098 Thioredoxin-like domain GIY02_05470 PF03466 LysR substrate binding domain GIY02_05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_05475 PF11922 Domain of unknown function (DUF3440) GIY02_05475 PF01507 Phosphoadenosine phosphosulfate reductase family GIY02_05480 PF02195 ParB-like nuclease domain GIY02_05485 PF00155 Aminotransferase class I and II GIY02_05495 PF03079 ARD/ARD' family GIY02_05500 PF00596 Class II Aldolase and Adducin N-terminal domain GIY02_05505 PF01008 Initiation factor 2 subunit family GIY02_05510 PF01636 Phosphotransferase enzyme family GIY02_05520 PF02653 Branched-chain amino acid transport system / permease component GIY02_05525 PF00005 ABC transporter GIY02_05545 PF04328 Selenoprotein, putative GIY02_05550 PF13722 5TM C-terminal transporter carbon starvation CstA GIY02_05550 PF02554 Carbon starvation protein CstA GIY02_05555 PF03061 Thioesterase superfamily GIY02_05565 PF00857 Isochorismatase family GIY02_05565 PF00550 Phosphopantetheine attachment site GIY02_05570 PF13193 AMP-binding enzyme C-terminal domain GIY02_05570 PF00501 AMP-binding enzyme GIY02_05580 PF01497 Periplasmic binding protein GIY02_05585 PF00704 Glycosyl hydrolases family 18 GIY02_05590 PF05977 Transmembrane secretion effector GIY02_05595 PF01032 FecCD transport family GIY02_05600 PF01032 FecCD transport family GIY02_05605 PF00005 ABC transporter GIY02_05610 PF13193 AMP-binding enzyme C-terminal domain GIY02_05610 PF00668 Condensation domain GIY02_05610 PF00550 Phosphopantetheine attachment site GIY02_05610 PF00501 AMP-binding enzyme GIY02_05610 PF00975 Thioesterase domain GIY02_05615 PF03621 MbtH-like protein GIY02_05620 PF11806 Domain of unknown function (DUF3327) GIY02_05620 PF00756 Putative esterase GIY02_05625 PF07715 TonB-dependent Receptor Plug Domain GIY02_05625 PF00593 TonB dependent receptor GIY02_05630 PF02780 Transketolase, C-terminal domain GIY02_05630 PF02779 Transketolase, pyrimidine binding domain GIY02_05635 PF00456 Transketolase, thiamine diphosphate binding domain GIY02_05640 PF04198 Putative sugar-binding domain GIY02_05640 PF00325 Bacterial regulatory proteins, crp family GIY02_05645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_05645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GIY02_05650 PF13407 Periplasmic binding protein domain GIY02_05660 PF00005 ABC transporter GIY02_05665 PF02653 Branched-chain amino acid transport system / permease component GIY02_05685 PF08267 Cobalamin-independent synthase, N-terminal domain GIY02_05685 PF01717 Cobalamin-independent synthase, Catalytic domain GIY02_05695 PF02028 BCCT, betaine/carnitine/choline family transporter GIY02_05700 PF13977 BetI-type transcriptional repressor, C-terminal GIY02_05700 PF00440 Bacterial regulatory proteins, tetR family GIY02_05705 PF00171 Aldehyde dehydrogenase family GIY02_05710 PF05199 GMC oxidoreductase GIY02_05710 PF00732 GMC oxidoreductase GIY02_05720 PF04107 Glutamate-cysteine ligase family 2(GCS2) GIY02_05725 PF09992 Phosphodiester glycosidase GIY02_05730 PF00690 Cation transporter/ATPase, N-terminus GIY02_05730 PF00689 Cation transporting ATPase, C-terminus GIY02_05735 PF06643 Protein of unknown function (DUF1158) GIY02_05740 PF12833 Helix-turn-helix domain GIY02_05745 PF12706 Beta-lactamase superfamily domain GIY02_05755 PF04237 YjbR GIY02_05760 PF00881 Nitroreductase family GIY02_05780 PF07690 Major Facilitator Superfamily GIY02_05785 PF00924 Mechanosensitive ion channel GIY02_05790 PF00324 Amino acid permease GIY02_05805 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_05815 PF00171 Aldehyde dehydrogenase family GIY02_05820 PF01266 FAD dependent oxidoreductase GIY02_05830 PF13520 Amino acid permease GIY02_05845 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system GIY02_05850 PF00850 Histone deacetylase domain GIY02_05860 PF00196 Bacterial regulatory proteins, luxR family GIY02_05865 PF04055 Radical SAM superfamily GIY02_05870 PF00884 Sulfatase GIY02_05880 PF10703 MoaF N-terminal domain GIY02_05880 PF17409 MoaF C-terminal domain GIY02_05885 PF00248 Aldo/keto reductase family GIY02_05890 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_05895 PF01546 Peptidase family M20/M25/M40 GIY02_05895 PF07687 Peptidase dimerisation domain GIY02_05915 PF00529 HlyD membrane-fusion protein of T1SS GIY02_05915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_05920 PF11742 Protein of unknown function (DUF3302) GIY02_05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_05930 PF03466 LysR substrate binding domain GIY02_05935 PF06496 Protein of unknown function (DUF1097) GIY02_05940 PF12796 Ankyrin repeats (3 copies) GIY02_05945 PF11392 Protein of unknown function (DUF2877) GIY02_05950 PF02629 CoA binding domain GIY02_05950 PF00549 CoA-ligase GIY02_05955 PF06545 Protein of unknown function (DUF1116) GIY02_05960 PF00696 Amino acid kinase family GIY02_05965 PF07969 Amidohydrolase family GIY02_05970 PF00152 tRNA synthetases class II (D, K and N) GIY02_05970 PF01336 OB-fold nucleic acid binding domain GIY02_05975 PF00854 POT family GIY02_05980 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GIY02_05980 PF01276 Orn/Lys/Arg decarboxylase, major domain GIY02_05980 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GIY02_05985 PF13520 Amino acid permease GIY02_05995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GIY02_06005 PF03279 Bacterial lipid A biosynthesis acyltransferase GIY02_06040 PF06069 PerC transcriptional activator GIY02_06060 PF00561 alpha/beta hydrolase fold GIY02_06070 PF03466 LysR substrate binding domain GIY02_06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_06080 PF07690 Major Facilitator Superfamily GIY02_06085 PF04962 KduI/IolB family GIY02_06090 PF03812 2-keto-3-deoxygluconate permease GIY02_06110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GIY02_06110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GIY02_06120 PF01406 tRNA synthetases class I (C) catalytic domain GIY02_06120 PF09190 DALR domain GIY02_06125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GIY02_06130 PF00149 Calcineurin-like phosphoesterase GIY02_06135 PF00731 AIR carboxylase GIY02_06140 PF02222 ATP-grasp domain GIY02_06140 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GIY02_06160 PF00005 ABC transporter GIY02_06165 PF13472 GDSL-like Lipase/Acylhydrolase family GIY02_06170 PF00106 short chain dehydrogenase GIY02_06175 PF00085 Thioredoxin GIY02_06180 PF03649 Uncharacterised protein family (UPF0014) GIY02_06185 PF00005 ABC transporter GIY02_06190 PF16200 C-terminal region of band_7 GIY02_06190 PF01145 SPFH domain / Band 7 family GIY02_06195 PF01957 NfeD-like C-terminal, partner-binding GIY02_06200 PF13411 MerR HTH family regulatory protein GIY02_06205 PF00403 Heavy-metal-associated domain GIY02_06210 PF01963 TraB family GIY02_06215 PF04073 Aminoacyl-tRNA editing domain GIY02_06220 PF02872 5'-nucleotidase, C-terminal domain GIY02_06220 PF00149 Calcineurin-like phosphoesterase GIY02_06225 PF07690 Major Facilitator Superfamily GIY02_06230 PF02254 TrkA-N domain GIY02_06230 PF00999 Sodium/hydrogen exchanger family GIY02_06235 PF00294 pfkB family carbohydrate kinase GIY02_06240 PF00762 Ferrochelatase GIY02_06245 PF05191 Adenylate kinase, active site lid GIY02_06250 PF00183 Hsp90 protein GIY02_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_06255 PF13662 Toprim domain GIY02_06255 PF02132 RecR protein GIY02_06260 PF02575 YbaB/EbfC DNA-binding family GIY02_06265 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GIY02_06265 PF12170 DNA polymerase III tau subunit V interacting with alpha GIY02_06265 PF12169 DNA polymerase III subunits gamma and tau domain III GIY02_06270 PF00156 Phosphoribosyl transferase domain GIY02_06275 PF04304 Protein of unknown function (DUF454) GIY02_06280 PF07445 Primosomal replication protein priC GIY02_06285 PF10689 Protein of unknown function (DUF2496) GIY02_06290 PF00924 Mechanosensitive ion channel GIY02_06290 PF12795 Mechanosensitive ion channel porin domain GIY02_06290 PF12794 Mechanosensitive ion channel inner membrane domain 1 GIY02_06295 PF00440 Bacterial regulatory proteins, tetR family GIY02_06295 PF08361 MAATS-type transcriptional repressor, C-terminal region GIY02_06300 PF00529 HlyD membrane-fusion protein of T1SS GIY02_06300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_06305 PF00873 AcrB/AcrD/AcrF family GIY02_06310 PF10757 Biofilm formation regulator YbaJ GIY02_06315 PF05321 Haemolysin expression modulating protein GIY02_06320 PF14602 Hexapeptide repeat of succinyl-transferase GIY02_06320 PF12464 Maltose acetyltransferase GIY02_06325 PF10777 Inner membrane protein YlaC GIY02_06330 PF00155 Aminotransferase class I and II GIY02_06330 PF00392 Bacterial regulatory proteins, gntR family GIY02_06340 PF00444 Ribosomal protein L36 GIY02_06345 PF01197 Ribosomal protein L31 GIY02_06350 PF12792 CSS motif domain associated with EAL GIY02_06350 PF00563 EAL domain GIY02_06355 PF07237 Protein of unknown function (DUF1428) GIY02_06390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GIY02_06395 PF09619 Type III secretion system lipoprotein chaperone (YscW) GIY02_06405 PF03466 LysR substrate binding domain GIY02_06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_06410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GIY02_06415 PF00909 Ammonium Transporter Family GIY02_06420 PF00543 Nitrogen regulatory protein P-II GIY02_06425 PF00005 ABC transporter GIY02_06425 PF00664 ABC transporter transmembrane region GIY02_06430 PF00005 ABC transporter GIY02_06430 PF00664 ABC transporter transmembrane region GIY02_06435 PF13404 AsnC-type helix-turn-helix domain GIY02_06435 PF01037 Lrp/AsnC ligand binding domain GIY02_06440 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_06450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_06450 PF12793 Sugar transport-related sRNA regulator N-term GIY02_06455 PF06508 Queuosine biosynthesis protein QueC GIY02_06475 PF13145 PPIC-type PPIASE domain GIY02_06480 PF00216 Bacterial DNA-binding protein GIY02_06485 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_06485 PF05362 Lon protease (S16) C-terminal proteolytic domain GIY02_06485 PF02190 ATP-dependent protease La (LON) substrate-binding domain GIY02_06490 PF07724 AAA domain (Cdc48 subfamily) GIY02_06490 PF06689 ClpX C4-type zinc finger GIY02_06490 PF10431 C-terminal, D2-small domain, of ClpB protein GIY02_06495 PF00574 Clp protease GIY02_06500 PF05698 Bacterial trigger factor protein (TF) C-terminus GIY02_06500 PF05697 Bacterial trigger factor protein (TF) GIY02_06500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GIY02_06510 PF01722 BolA-like protein GIY02_06520 PF03923 Uncharacterized lipoprotein GIY02_06520 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GIY02_06535 PF00583 Acetyltransferase (GNAT) family GIY02_06550 PF06481 COX Aromatic Rich Motif GIY02_06550 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GIY02_06555 PF00115 Cytochrome C and Quinol oxidase polypeptide I GIY02_06560 PF00510 Cytochrome c oxidase subunit III GIY02_06565 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GIY02_06570 PF01040 UbiA prenyltransferase family GIY02_06580 PF07690 Major Facilitator Superfamily GIY02_06620 PF00005 ABC transporter GIY02_06635 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_06635 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_06640 PF08669 Glycine cleavage T-protein C-terminal barrel domain GIY02_06640 PF01571 Aminomethyltransferase folate-binding domain GIY02_06650 PF07977 FabA-like domain GIY02_06660 PF01648 4'-phosphopantetheinyl transferase superfamily GIY02_06670 PF04829 Pre-toxin domain with VENN motif GIY02_06670 PF05860 haemagglutination activity domain GIY02_06670 PF13332 Hemagglutinin repeat GIY02_06670 PF05594 Haemagluttinin repeat GIY02_06670 PF14436 Bacterial EndoU nuclease GIY02_06675 PF04461 Protein of unknown function (DUF520) GIY02_06680 PF08546 Ketopantoate reductase PanE/ApbA C terminal GIY02_06680 PF02558 Ketopantoate reductase PanE/ApbA GIY02_06685 PF01965 DJ-1/PfpI family GIY02_06695 PF02568 Thiamine biosynthesis protein (ThiI) GIY02_06695 PF02926 THUMP domain GIY02_06700 PF02609 Exonuclease VII small subunit GIY02_06705 PF00348 Polyprenyl synthetase GIY02_06710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GIY02_06710 PF02780 Transketolase, C-terminal domain GIY02_06710 PF02779 Transketolase, pyrimidine binding domain GIY02_06715 PF00248 Aldo/keto reductase family GIY02_06720 PF04608 Phosphatidylglycerophosphatase A GIY02_06725 PF00586 AIR synthase related protein, N-terminal domain GIY02_06725 PF02769 AIR synthase related protein, C-terminal domain GIY02_06730 PF01029 NusB family GIY02_06735 PF00885 6,7-dimethyl-8-ribityllumazine synthase GIY02_06740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GIY02_06740 PF01872 RibD C-terminal domain GIY02_06745 PF03477 ATP cone domain GIY02_06750 PF11622 Protein of unknown function (DUF3251) GIY02_06755 PF03502 Nucleoside-specific channel-forming protein, Tsx GIY02_06770 PF07549 SecD/SecF GG Motif GIY02_06770 PF02355 Protein export membrane protein GIY02_06775 PF07549 SecD/SecF GG Motif GIY02_06775 PF02355 Protein export membrane protein GIY02_06775 PF13721 SecD export protein N-terminal TM region GIY02_06780 PF02699 Preprotein translocase subunit GIY02_06785 PF01702 Queuine tRNA-ribosyltransferase GIY02_06790 PF02547 Queuosine biosynthesis protein GIY02_06795 PF04336 Acyl carrier protein phosphodiesterase GIY02_06800 PF00578 AhpC/TSA family GIY02_06800 PF10417 C-terminal domain of 1-Cys peroxiredoxin GIY02_06805 PF07969 Amidohydrolase family GIY02_06815 PF00857 Isochorismatase family GIY02_06820 PF03466 LysR substrate binding domain GIY02_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_06825 PF02903 Alpha amylase, N-terminal ig-like domain GIY02_06825 PF00128 Alpha amylase, catalytic domain GIY02_06830 PF00324 Amino acid permease GIY02_06835 PF05525 Branched-chain amino acid transport protein GIY02_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_06840 PF11808 Phosphate regulon sensor protein PhoR GIY02_06840 PF00989 PAS fold GIY02_06840 PF00512 His Kinase A (phospho-acceptor) domain GIY02_06845 PF00486 Transcriptional regulatory protein, C terminal GIY02_06845 PF00072 Response regulator receiver domain GIY02_06850 PF12320 Type 5 capsule protein repressor C-terminal domain GIY02_06850 PF00149 Calcineurin-like phosphoesterase GIY02_06855 PF13476 AAA domain GIY02_06860 PF00480 ROK family GIY02_06865 PF04381 Putative exonuclease, RdgC GIY02_06870 PF06865 Pyrimidine/purine nucleoside phosphorylase GIY02_06875 PF07302 AroM protein GIY02_06880 PF16362 YaiA protein GIY02_06885 PF01202 Shikimate kinase GIY02_06890 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) GIY02_06895 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GIY02_06900 PF14748 Pyrroline-5-carboxylate reductase dimerisation GIY02_06900 PF03807 NADP oxidoreductase coenzyme F420-dependent GIY02_06905 PF07769 psiF repeat GIY02_06915 PF10796 Sigma-S stabilisation anti-adaptor protein GIY02_06920 PF07690 Major Facilitator Superfamily GIY02_06925 PF07478 D-ala D-ala ligase C-terminus GIY02_06925 PF01820 D-ala D-ala ligase N-terminus GIY02_06930 PF10953 Protein of unknown function (DUF2754) GIY02_06935 PF10954 Protein of unknown function (DUF2755) GIY02_06945 PF05992 SbmA/BacA-like family GIY02_06955 PF00144 Beta-lactamase GIY02_06960 PF00490 Delta-aminolevulinic acid dehydratase GIY02_06980 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GIY02_06985 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_06990 PF00005 ABC transporter GIY02_06995 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GIY02_07000 PF02574 Homocysteine S-methyltransferase GIY02_07005 PF00324 Amino acid permease GIY02_07015 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_07020 PF00005 ABC transporter GIY02_07025 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_07030 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_07035 PF03466 LysR substrate binding domain GIY02_07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_07040 PF07690 Major Facilitator Superfamily GIY02_07045 PF01546 Peptidase family M20/M25/M40 GIY02_07045 PF07687 Peptidase dimerisation domain GIY02_07060 PF15976 CS1-pili formation C-terminal GIY02_07060 PF16967 E-set like domain GIY02_07065 PF18649 EcpB C-terminal domain GIY02_07070 PF16449 Fimbrillin MatB GIY02_07075 PF00196 Bacterial regulatory proteins, luxR family GIY02_07080 PF00005 ABC transporter GIY02_07090 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_07095 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_07120 PF00267 Gram-negative porin GIY02_07125 PF01472 PUA domain GIY02_07125 PF00696 Amino acid kinase family GIY02_07130 PF00171 Aldehyde dehydrogenase family GIY02_07170 PF00144 Beta-lactamase GIY02_07175 PF03466 LysR substrate binding domain GIY02_07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_07180 PF00419 Fimbrial protein GIY02_07185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_07185 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_07205 PF08943 CsiD GIY02_07210 PF01266 FAD dependent oxidoreductase GIY02_07215 PF00171 Aldehyde dehydrogenase family GIY02_07220 PF00202 Aminotransferase class-III GIY02_07225 PF00324 Amino acid permease GIY02_07230 PF00392 Bacterial regulatory proteins, gntR family GIY02_07230 PF07729 FCD domain GIY02_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_07245 PF03466 LysR substrate binding domain GIY02_07250 PF00248 Aldo/keto reductase family GIY02_07255 PF00106 short chain dehydrogenase GIY02_07270 PF02397 Bacterial sugar transferase GIY02_07280 PF02563 Polysaccharide biosynthesis/export protein GIY02_07300 PF00535 Glycosyl transferase family 2 GIY02_07305 PF13439 Glycosyltransferase Family 4 GIY02_07305 PF00534 Glycosyl transferases group 1 GIY02_07310 PF13439 Glycosyltransferase Family 4 GIY02_07310 PF00534 Glycosyl transferases group 1 GIY02_07325 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_07340 PF00156 Phosphoribosyl transferase domain GIY02_07345 PF07687 Peptidase dimerisation domain GIY02_07345 PF01546 Peptidase family M20/M25/M40 GIY02_07350 PF13673 Acetyltransferase (GNAT) domain GIY02_07355 PF11799 impB/mucB/samB family C-terminal domain GIY02_07355 PF00817 impB/mucB/samB family GIY02_07355 PF11798 IMS family HHH motif GIY02_07360 PF03009 Glycerophosphoryl diester phosphodiesterase family GIY02_07365 PF04400 (Na+)-NQR maturation NqrM GIY02_07370 PF00970 Oxidoreductase FAD-binding domain GIY02_07370 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_07370 PF00175 Oxidoreductase NAD-binding domain GIY02_07375 PF02508 Rnf-Nqr subunit, membrane protein GIY02_07380 PF02508 Rnf-Nqr subunit, membrane protein GIY02_07385 PF04205 FMN-binding domain GIY02_07390 PF03116 NQR2, RnfD, RnfE family GIY02_07395 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GIY02_07395 PF11973 NQRA C-terminal domain GIY02_07400 PF03734 L,D-transpeptidase catalytic domain GIY02_07405 PF13230 Glutamine amidotransferases class-II GIY02_07410 PF13580 SIS domain GIY02_07415 PF02770 Acyl-CoA dehydrogenase, middle domain GIY02_07415 PF09317 Domain of unknown function (DUF1974) GIY02_07415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GIY02_07415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GIY02_07420 PF00795 Carbon-nitrogen hydrolase GIY02_07425 PF01810 LysE type translocator GIY02_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_07430 PF03466 LysR substrate binding domain GIY02_07440 PF00929 Exonuclease GIY02_07445 PF00075 RNase H GIY02_07450 PF08241 Methyltransferase domain GIY02_07455 PF00753 Metallo-beta-lactamase superfamily GIY02_07455 PF16123 Hydroxyacylglutathione hydrolase C-terminus GIY02_07460 PF01464 Transglycosylase SLT domain GIY02_07460 PF01476 LysM domain GIY02_07465 PF08241 Methyltransferase domain GIY02_07470 PF03372 Endonuclease/Exonuclease/phosphatase family GIY02_07475 PF07690 Major Facilitator Superfamily GIY02_07480 PF03466 LysR substrate binding domain GIY02_07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_07485 PF00248 Aldo/keto reductase family GIY02_07525 PF09383 NIL domain GIY02_07525 PF00005 ABC transporter GIY02_07530 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_07535 PF03180 NLPA lipoprotein GIY02_07540 PF16358 RcsF lipoprotein GIY02_07545 PF18389 TrmO C-terminal domain GIY02_07545 PF01980 tRNA-methyltransferase O GIY02_07550 PF04073 Aminoacyl-tRNA editing domain GIY02_07550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GIY02_07550 PF03129 Anticodon binding domain GIY02_07555 PF17185 NlpE C-terminal OB domain GIY02_07555 PF04170 NlpE N-terminal domain GIY02_07560 PF00472 RF-1 domain GIY02_07565 PF07152 YaeQ protein GIY02_07570 PF06786 Uncharacterised protein family (UPF0253) GIY02_07575 PF07073 Modulator of Rho-dependent transcription termination (ROF) GIY02_07580 PF09179 TilS substrate binding domain GIY02_07580 PF11734 TilS substrate C-terminal domain GIY02_07580 PF01171 PP-loop family GIY02_07585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GIY02_07600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GIY02_07605 PF07733 Bacterial DNA polymerase III alpha NTPase domain GIY02_07605 PF02811 PHP domain GIY02_07605 PF01336 OB-fold nucleic acid binding domain GIY02_07605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GIY02_07605 PF14579 Helix-hairpin-helix motif GIY02_07610 PF01351 Ribonuclease HII GIY02_07615 PF02684 Lipid-A-disaccharide synthetase GIY02_07620 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GIY02_07620 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_07625 PF07977 FabA-like domain GIY02_07630 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GIY02_07630 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_07635 PF03938 Outer membrane protein (OmpH-like) GIY02_07640 PF01103 Surface antigen GIY02_07640 PF07244 Surface antigen variable number repeat GIY02_07645 PF17820 PDZ domain GIY02_07645 PF02163 Peptidase family M50 GIY02_07655 PF01255 Putative undecaprenyl diphosphate synthase GIY02_07660 PF13288 DXP reductoisomerase C-terminal domain GIY02_07660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GIY02_07660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GIY02_07665 PF01765 Ribosome recycling factor GIY02_07670 PF00696 Amino acid kinase family GIY02_07675 PF00889 Elongation factor TS GIY02_07680 PF00318 Ribosomal protein S2 GIY02_07685 PF00557 Metallopeptidase family M24 GIY02_07690 PF01909 Nucleotidyltransferase domain GIY02_07690 PF01966 HD domain GIY02_07690 PF01842 ACT domain GIY02_07690 PF08335 GlnD PII-uridylyltransferase GIY02_07695 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_07695 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GIY02_07695 PF14602 Hexapeptide repeat of succinyl-transferase GIY02_07700 PF11944 Protein of unknown function (DUF3461) GIY02_07710 PF13556 PucR C-terminal helix-turn-helix domain GIY02_07710 PF05651 Putative sugar diacid recognition GIY02_07710 PF17853 GGDEF-like domain GIY02_07715 PF00595 PDZ domain GIY02_07720 PF13286 Phosphohydrolase-associated domain GIY02_07720 PF01966 HD domain GIY02_07725 PF01048 Phosphorylase superfamily GIY02_07730 PF01497 Periplasmic binding protein GIY02_07735 PF03458 UPF0126 domain GIY02_07740 PF01521 Iron-sulphur cluster biosynthesis GIY02_07745 PF00654 Voltage gated chloride channel GIY02_07750 PF00202 Aminotransferase class-III GIY02_07755 PF01032 FecCD transport family GIY02_07760 PF01497 Periplasmic binding protein GIY02_07765 PF00005 ABC transporter GIY02_07770 PF00593 TonB dependent receptor GIY02_07770 PF07715 TonB-dependent Receptor Plug Domain GIY02_07775 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal GIY02_07775 PF00912 Transglycosylase GIY02_07775 PF00905 Penicillin binding protein transpeptidase domain GIY02_07775 PF14814 Bifunctional transglycosylase second domain GIY02_07785 PF08482 ATP-dependent helicase C-terminal GIY02_07785 PF00271 Helicase conserved C-terminal domain GIY02_07785 PF00270 DEAD/DEAH box helicase GIY02_07785 PF04408 Helicase associated domain (HA2) GIY02_07790 PF02834 LigT like Phosphoesterase GIY02_07795 PF03749 Sugar fermentation stimulation protein RE domain GIY02_07795 PF17746 SfsA N-terminal OB domain GIY02_07800 PF01258 Prokaryotic dksA/traR C4-type zinc finger GIY02_07805 PF00749 tRNA synthetases class I (E and Q), catalytic domain GIY02_07810 PF12627 Probable RNA and SrmB- binding site of polymerase A GIY02_07810 PF12626 Polymerase A arginine-rich C-terminus GIY02_07810 PF01743 Poly A polymerase head domain GIY02_07815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GIY02_07820 PF02548 Ketopantoate hydroxymethyltransferase GIY02_07825 PF02569 Pantoate-beta-alanine ligase GIY02_07830 PF02261 Aspartate decarboxylase GIY02_07835 PF01522 Polysaccharide deacetylase GIY02_07840 PF03610 PTS system fructose IIA component GIY02_07845 PF01061 ABC-2 type transporter GIY02_07850 PF00005 ABC transporter GIY02_07855 PF00484 Carbonic anhydrase GIY02_07860 PF00156 Phosphoribosyl transferase domain GIY02_07865 PF01011 PQQ enzyme repeat GIY02_07870 PF07731 Multicopper oxidase GIY02_07870 PF00394 Multicopper oxidase GIY02_07870 PF07732 Multicopper oxidase GIY02_07875 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) GIY02_07885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GIY02_07885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GIY02_07890 PF17284 Spermidine synthase tetramerisation domain GIY02_07895 PF02675 S-adenosylmethionine decarboxylase GIY02_07900 PF06062 Uncharacterised protein family (UPF0231) GIY02_07905 PF11791 Aconitate B N-terminal domain GIY02_07905 PF06434 Aconitate hydratase 2 N-terminus GIY02_07905 PF00330 Aconitase family (aconitate hydratase) GIY02_07910 PF11737 Protein of unknown function (DUF3300) GIY02_07925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GIY02_07925 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_07930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GIY02_07930 PF02817 e3 binding domain GIY02_07930 PF00364 Biotin-requiring enzyme GIY02_07935 PF00456 Transketolase, thiamine diphosphate binding domain GIY02_07935 PF17831 Pyruvate dehydrogenase E1 component middle domain GIY02_07940 PF00392 Bacterial regulatory proteins, gntR family GIY02_07940 PF07729 FCD domain GIY02_07945 PF00324 Amino acid permease GIY02_07955 PF04616 Glycosyl hydrolases family 43 GIY02_07955 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain GIY02_07960 PF17113 Regulatory signalling modulator protein AmpE GIY02_07965 PF01510 N-acetylmuramoyl-L-alanine amidase GIY02_07970 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GIY02_07970 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GIY02_07975 PF07963 Prokaryotic N-terminal methylation motif GIY02_07980 PF00437 Type II/IV secretion system protein GIY02_07980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GIY02_07985 PF00482 Type II secretion system (T2SS), protein F GIY02_07990 PF00478 IMP dehydrogenase / GMP reductase domain GIY02_07995 PF01121 Dephospho-CoA kinase GIY02_08000 PF07072 Cell division protein GIY02_08005 PF03884 DNA gyrase inhibitor YacG GIY02_08010 PF00293 NUDIX domain GIY02_08015 PF02810 SEC-C motif GIY02_08015 PF07517 SecA DEAD-like domain GIY02_08015 PF07516 SecA Wing and Scaffold domain GIY02_08015 PF01043 SecA preprotein cross-linking domain GIY02_08020 PF06558 Secretion monitor precursor protein (SecM) GIY02_08025 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GIY02_08030 PF12327 FtsZ family, C-terminal domain GIY02_08030 PF00091 Tubulin/FtsZ family, GTPase domain GIY02_08035 PF02491 SHS2 domain inserted in FTSA GIY02_08040 PF08478 POTRA domain, FtsQ-type GIY02_08040 PF03799 Cell division protein FtsQ GIY02_08045 PF07478 D-ala D-ala ligase C-terminus GIY02_08045 PF01820 D-ala D-ala ligase N-terminus GIY02_08050 PF08245 Mur ligase middle domain GIY02_08050 PF01225 Mur ligase family, catalytic domain GIY02_08050 PF02875 Mur ligase family, glutamate ligase domain GIY02_08055 PF03033 Glycosyltransferase family 28 N-terminal domain GIY02_08055 PF04101 Glycosyltransferase family 28 C-terminal domain GIY02_08060 PF01098 Cell cycle protein GIY02_08065 PF02875 Mur ligase family, glutamate ligase domain GIY02_08065 PF08245 Mur ligase middle domain GIY02_08070 PF00953 Glycosyl transferase family 4 GIY02_08070 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GIY02_08075 PF02875 Mur ligase family, glutamate ligase domain GIY02_08075 PF08245 Mur ligase middle domain GIY02_08075 PF01225 Mur ligase family, catalytic domain GIY02_08080 PF02875 Mur ligase family, glutamate ligase domain GIY02_08080 PF08245 Mur ligase middle domain GIY02_08080 PF01225 Mur ligase family, catalytic domain GIY02_08085 PF03717 Penicillin-binding Protein dimerisation domain GIY02_08085 PF00905 Penicillin binding protein transpeptidase domain GIY02_08090 PF04999 Cell division protein FtsL GIY02_08095 PF01795 MraW methylase family GIY02_08100 PF02381 MraZ protein, putative antitoxin-like GIY02_08105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GIY02_08105 PF00356 Bacterial regulatory proteins, lacI family GIY02_08110 PF10369 Small subunit of acetolactate synthase GIY02_08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_08125 PF03466 LysR substrate binding domain GIY02_08135 PF08502 LeuA allosteric (dimerisation) domain GIY02_08135 PF00682 HMGL-like GIY02_08140 PF00180 Isocitrate/isopropylmalate dehydrogenase GIY02_08145 PF00330 Aconitase family (aconitate hydratase) GIY02_08150 PF00694 Aconitase C-terminal domain GIY02_08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_08155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GIY02_08160 PF08501 Shikimate dehydrogenase substrate binding domain GIY02_08160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GIY02_08165 PF07690 Major Facilitator Superfamily GIY02_08170 PF01487 Type I 3-dehydroquinase GIY02_08175 PF03466 LysR substrate binding domain GIY02_08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_08180 PF07690 Major Facilitator Superfamily GIY02_08185 PF07690 Major Facilitator Superfamily GIY02_08195 PF12793 Sugar transport-related sRNA regulator N-term GIY02_08195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_08205 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_08210 PF00005 ABC transporter GIY02_08215 PF09335 SNARE associated Golgi protein GIY02_08220 PF02311 AraC-like ligand binding domain GIY02_08220 PF12833 Helix-turn-helix domain GIY02_08225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_08230 PF11762 L-arabinose isomerase C-terminal domain GIY02_08230 PF02610 L-arabinose isomerase GIY02_08235 PF00596 Class II Aldolase and Adducin N-terminal domain GIY02_08240 PF00136 DNA polymerase family B GIY02_08240 PF03104 DNA polymerase family B, exonuclease domain GIY02_08245 PF00176 SNF2 family N-terminal domain GIY02_08245 PF18337 RapA N-terminal Tudor like domain GIY02_08245 PF18339 RapA N-terminal Tudor like domain 1 GIY02_08245 PF12137 RNA polymerase recycling family C-terminal GIY02_08245 PF00271 Helicase conserved C-terminal domain GIY02_08250 PF00849 RNA pseudouridylate synthase GIY02_08255 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GIY02_08260 PF03390 2-hydroxycarboxylate transporter family GIY02_08265 PF17203 Single cache domain 3 GIY02_08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_08270 PF00072 Response regulator receiver domain GIY02_08270 PF12431 Transcriptional regulator GIY02_08275 PF00226 DnaJ domain GIY02_08275 PF05099 Tellurite resistance protein TerB GIY02_08280 PF03968 OstA-like protein GIY02_08280 PF04453 LPS transport system D GIY02_08285 PF09312 SurA N-terminal domain GIY02_08285 PF00639 PPIC-type PPIASE domain GIY02_08290 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GIY02_08295 PF00398 Ribosomal RNA adenine dimethylase GIY02_08300 PF04379 ApaG domain GIY02_08305 PF00149 Calcineurin-like phosphoesterase GIY02_08310 PF00186 Dihydrofolate reductase GIY02_08315 PF02254 TrkA-N domain GIY02_08315 PF00999 Sodium/hydrogen exchanger family GIY02_08320 PF02525 Flavodoxin-like fold GIY02_08325 PF03797 Autotransporter beta-domain GIY02_08330 PF06004 Bacterial protein of unknown function (DUF903) GIY02_08335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GIY02_08335 PF02142 MGS-like domain GIY02_08335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GIY02_08340 PF00117 Glutamine amidotransferase class-I GIY02_08340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GIY02_08345 PF05173 Dihydrodipicolinate reductase, C-terminus GIY02_08345 PF01113 Dihydrodipicolinate reductase, N-terminus GIY02_08350 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GIY02_08355 PF04223 Citrate lyase, alpha subunit (CitF) GIY02_08360 PF03328 HpcH/HpaI aldolase/citrate lyase family GIY02_08365 PF06857 Malonate decarboxylase delta subunit (MdcD) GIY02_08375 PF03390 2-hydroxycarboxylate transporter family GIY02_08380 PF04277 Oxaloacetate decarboxylase, gamma chain GIY02_08390 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GIY02_08395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_08395 PF17203 Single cache domain 3 GIY02_08400 PF00072 Response regulator receiver domain GIY02_08400 PF12431 Transcriptional regulator GIY02_08405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GIY02_08405 PF02272 DHHA1 domain GIY02_08405 PF01411 tRNA synthetases class II (A) GIY02_08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_08410 PF03466 LysR substrate binding domain GIY02_08415 PF00330 Aconitase family (aconitate hydratase) GIY02_08415 PF00694 Aconitase C-terminal domain GIY02_08425 PF00939 Sodium:sulfate symporter transmembrane region GIY02_08430 PF04303 PrpF protein GIY02_08440 PF03466 LysR substrate binding domain GIY02_08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_08445 PF01156 Inosine-uridine preferring nucleoside hydrolase GIY02_08450 PF02401 LytB protein GIY02_08455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GIY02_08460 PF01252 Signal peptidase (SPase) II GIY02_08465 PF00133 tRNA synthetases class I (I, L, M and V) GIY02_08465 PF06827 Zinc finger found in FPG and IleRS GIY02_08465 PF08264 Anticodon-binding domain of tRNA GIY02_08470 PF06574 FAD synthetase GIY02_08470 PF01687 Riboflavin kinase GIY02_08480 PF01649 Ribosomal protein S20 GIY02_08485 PF03466 LysR substrate binding domain GIY02_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_08490 PF06965 Na+/H+ antiporter 1 GIY02_08505 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_08505 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_08510 PF16970 Type-1 fimbrial protein, A GIY02_08515 PF00419 Fimbrial protein GIY02_08520 PF00419 Fimbrial protein GIY02_08525 PF00577 Outer membrane usher protein GIY02_08525 PF13953 PapC C-terminal domain GIY02_08525 PF13954 PapC N-terminal domain GIY02_08530 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_08530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_08535 PF00419 Fimbrial protein GIY02_08540 PF15977 Winged helix-turn-helix DNA binding GIY02_08555 PF00704 Glycosyl hydrolases family 18 GIY02_08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_08575 PF03466 LysR substrate binding domain GIY02_08580 PF00226 DnaJ domain GIY02_08580 PF01556 DnaJ C terminal domain GIY02_08580 PF00684 DnaJ central domain GIY02_08585 PF00012 Hsp70 protein GIY02_08590 PF01184 GPR1/FUN34/yaaH family GIY02_08595 PF07690 Major Facilitator Superfamily GIY02_08600 PF00994 Probable molybdopterin binding domain GIY02_08605 PF00923 Transaldolase/Fructose-6-phosphate aldolase GIY02_08610 PF01235 Sodium:alanine symporter family GIY02_08615 PF03883 Peroxide stress protein YaaA GIY02_08620 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_08620 PF14821 Threonine synthase N terminus GIY02_08625 PF08544 GHMP kinases C terminal GIY02_08625 PF00288 GHMP kinases N terminal domain GIY02_08630 PF00696 Amino acid kinase family GIY02_08630 PF13840 ACT domain GIY02_08630 PF00742 Homoserine dehydrogenase GIY02_08630 PF03447 Homoserine dehydrogenase, NAD binding domain GIY02_08630 PF01842 ACT domain GIY02_08635 PF08254 Threonine leader peptide GIY02_08640 PF00588 SpoU rRNA Methylase family GIY02_08650 PF00486 Transcriptional regulatory protein, C terminal GIY02_08650 PF00072 Response regulator receiver domain GIY02_08655 PF06123 Inner membrane protein CreD GIY02_08660 PF00672 HAMP domain GIY02_08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_08660 PF00512 His Kinase A (phospho-acceptor) domain GIY02_08665 PF00072 Response regulator receiver domain GIY02_08665 PF00486 Transcriptional regulatory protein, C terminal GIY02_08670 PF05981 CreA protein GIY02_08675 PF12833 Helix-turn-helix domain GIY02_08675 PF06445 GyrI-like small molecule binding domain GIY02_08680 PF00300 Histidine phosphatase superfamily (branch 1) GIY02_08685 PF01931 Protein of unknown function DUF84 GIY02_08690 PF01371 Trp repressor protein GIY02_08695 PF01464 Transglycosylase SLT domain GIY02_08695 PF14718 Soluble lytic murein transglycosylase L domain GIY02_08700 PF00005 ABC transporter GIY02_08700 PF12848 ABC transporter GIY02_08705 PF01381 Helix-turn-helix GIY02_08705 PF13521 AAA domain GIY02_08710 PF18073 Rubredoxin metal binding domain GIY02_08715 PF18429 Domain of unknown function (DUF5609) GIY02_08720 PF10144 Bacterial virulence factor haemolysin GIY02_08725 PF03099 Biotin/lipoate A/B protein ligase family GIY02_08725 PF10437 Bacterial lipoate protein ligase C-terminus GIY02_08730 PF01048 Phosphorylase superfamily GIY02_08735 PF01676 Metalloenzyme superfamily GIY02_08740 PF00591 Glycosyl transferase family, a/b domain GIY02_08740 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GIY02_08740 PF02885 Glycosyl transferase family, helical bundle domain GIY02_08745 PF01791 DeoC/LacD family aldolase GIY02_08750 PF01026 TatD related DNase GIY02_08755 PF01734 Patatin-like phospholipase GIY02_08760 PF07043 Protein of unknown function (DUF1328) GIY02_08765 PF04972 BON domain GIY02_08770 PF16658 Class II release factor RF3, C-terminal domain GIY02_08770 PF03144 Elongation factor Tu domain 2 GIY02_08770 PF00009 Elongation factor Tu GTP binding domain GIY02_08775 PF13419 Haloacid dehalogenase-like hydrolase GIY02_08780 PF00583 Acetyltransferase (GNAT) family GIY02_08785 PF03603 DNA polymerase III psi subunit GIY02_08790 PF08468 Methyltransferase small domain N-terminal GIY02_08790 PF05175 Methyltransferase small domain GIY02_08810 PF07256 Protein of unknown function (DUF1435) GIY02_08815 PF00990 Diguanylate cyclase, GGDEF domain GIY02_08820 PF11575 FhuF 2Fe-2S C-terminal domain GIY02_08820 PF06276 Ferric iron reductase FhuF-like transporter GIY02_08825 PF02378 Phosphotransferase system, EIIC GIY02_08830 PF04073 Aminoacyl-tRNA editing domain GIY02_08835 PF00196 Bacterial regulatory proteins, luxR family GIY02_08840 PF00196 Bacterial regulatory proteins, luxR family GIY02_08850 PF01494 FAD binding domain GIY02_08855 PF06738 Putative threonine/serine exporter GIY02_08860 PF12821 Threonine/Serine exporter, ThrE GIY02_08865 PF17948 DnaT DNA-binding domain GIY02_08870 PF01695 IstB-like ATP binding protein GIY02_08880 PF00884 Sulfatase GIY02_08890 PF00583 Acetyltransferase (GNAT) family GIY02_08895 PF01418 Helix-turn-helix domain, rpiR family GIY02_08895 PF01380 SIS domain GIY02_08895 PF02685 Glucokinase GIY02_08900 PF01081 KDPG and KHG aldolase GIY02_08905 PF05035 2-keto-3-deoxy-galactonokinase GIY02_08920 PF07969 Amidohydrolase family GIY02_08930 PF02615 Malate/L-lactate dehydrogenase GIY02_08935 PF13520 Amino acid permease GIY02_08940 PF00171 Aldehyde dehydrogenase family GIY02_08945 PF00701 Dihydrodipicolinate synthetase family GIY02_08955 PF05544 Proline racemase GIY02_08960 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GIY02_08960 PF01266 FAD dependent oxidoreductase GIY02_08970 PF04324 BFD-like [2Fe-2S] binding domain GIY02_08970 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_08980 PF01557 Fumarylacetoacetate (FAA) hydrolase family GIY02_08985 PF01557 Fumarylacetoacetate (FAA) hydrolase family GIY02_08990 PF00171 Aldehyde dehydrogenase family GIY02_08995 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GIY02_09000 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase GIY02_09005 PF01557 Fumarylacetoacetate (FAA) hydrolase family GIY02_09010 PF03328 HpcH/HpaI aldolase/citrate lyase family GIY02_09015 PF07690 Major Facilitator Superfamily GIY02_09020 PF12833 Helix-turn-helix domain GIY02_09025 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GIY02_09025 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GIY02_09030 PF01613 Flavin reductase like domain GIY02_09040 PF04829 Pre-toxin domain with VENN motif GIY02_09040 PF13018 Extended Signal Peptide of Type V secretion system GIY02_09040 PF13332 Hemagglutinin repeat GIY02_09040 PF05860 haemagglutination activity domain GIY02_09045 PF13018 Extended Signal Peptide of Type V secretion system GIY02_09045 PF05860 haemagglutination activity domain GIY02_09045 PF04829 Pre-toxin domain with VENN motif GIY02_09045 PF13332 Hemagglutinin repeat GIY02_09075 PF17287 POTRA domain GIY02_09075 PF08479 POTRA domain, ShlB-type GIY02_09075 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GIY02_09085 PF04328 Selenoprotein, putative GIY02_09090 PF07683 Cobalamin synthesis protein cobW C-terminal domain GIY02_09090 PF02492 CobW/HypB/UreG, nucleotide-binding domain GIY02_09095 PF00171 Aldehyde dehydrogenase family GIY02_09100 PF04286 Protein of unknown function (DUF445) GIY02_09105 PF07690 Major Facilitator Superfamily GIY02_09115 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component GIY02_09120 PF01869 BadF/BadG/BcrA/BcrD ATPase family GIY02_09125 PF11823 Protein of unknown function (DUF3343) GIY02_09130 PF01546 Peptidase family M20/M25/M40 GIY02_09130 PF07687 Peptidase dimerisation domain GIY02_09135 PF07670 Nucleoside recognition GIY02_09140 PF07670 Nucleoside recognition GIY02_09155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_09155 PF00529 HlyD membrane-fusion protein of T1SS GIY02_09165 PF06568 Domain of unknown function (DUF1127) GIY02_09170 PF00392 Bacterial regulatory proteins, gntR family GIY02_09170 PF00155 Aminotransferase class I and II GIY02_09175 PF03069 Acetamidase/Formamidase family GIY02_09180 PF00324 Amino acid permease GIY02_09185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GIY02_09200 PF03610 PTS system fructose IIA component GIY02_09200 PF03830 PTS system sorbose subfamily IIB component GIY02_09205 PF03609 PTS system sorbose-specific iic component GIY02_09210 PF03613 PTS system mannose/fructose/sorbose family IID component GIY02_09215 PF03841 L-seryl-tRNA selenium transferase GIY02_09220 PF07071 KDGP aldolase GIY02_09240 PF00936 BMC domain GIY02_09245 PF00936 BMC domain GIY02_09250 PF00936 BMC domain GIY02_09255 PF00465 Iron-containing alcohol dehydrogenase GIY02_09255 PF00171 Aldehyde dehydrogenase family GIY02_09265 PF00465 Iron-containing alcohol dehydrogenase GIY02_09270 PF01228 Glycine radical GIY02_09270 PF02901 Pyruvate formate lyase-like GIY02_09275 PF04055 Radical SAM superfamily GIY02_09275 PF13187 4Fe-4S dicluster domain GIY02_09280 PF00936 BMC domain GIY02_09285 PF06130 Phosphate propanoyltransferase GIY02_09295 PF00893 Small Multidrug Resistance protein GIY02_09300 PF00893 Small Multidrug Resistance protein GIY02_09305 PF00579 tRNA synthetases class I (W and Y) GIY02_09310 PF00990 Diguanylate cyclase, GGDEF domain GIY02_09315 PF13533 Biotin-lipoyl like GIY02_09320 PF00005 ABC transporter GIY02_09360 PF08007 Cupin superfamily protein GIY02_09365 PF00512 His Kinase A (phospho-acceptor) domain GIY02_09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_09365 PF00672 HAMP domain GIY02_09370 PF00072 Response regulator receiver domain GIY02_09370 PF00486 Transcriptional regulatory protein, C terminal GIY02_09375 PF02321 Outer membrane efflux protein GIY02_09380 PF11604 Copper binding periplasmic protein CusF GIY02_09385 PF00529 HlyD membrane-fusion protein of T1SS GIY02_09385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_09390 PF00873 AcrB/AcrD/AcrF family GIY02_09400 PF01223 DNA/RNA non-specific endonuclease GIY02_09515 PF00589 Phage integrase family GIY02_09535 PF13356 Arm DNA-binding domain GIY02_09535 PF00589 Phage integrase family GIY02_09545 PF00484 Carbonic anhydrase GIY02_09550 PF00916 Sulfate permease family GIY02_09550 PF01740 STAS domain GIY02_09555 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_09555 PF00107 Zinc-binding dehydrogenase GIY02_09565 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_09570 PF00149 Calcineurin-like phosphoesterase GIY02_09575 PF00005 ABC transporter GIY02_09575 PF17912 MalK OB fold domain GIY02_09580 PF13416 Bacterial extracellular solute-binding protein GIY02_09585 PF00083 Sugar (and other) transporter GIY02_09590 PF01261 Xylose isomerase-like TIM barrel GIY02_09595 PF01261 Xylose isomerase-like TIM barrel GIY02_09600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GIY02_09600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GIY02_09605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_09605 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_09605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_09615 PF00294 pfkB family carbohydrate kinase GIY02_09620 PF01418 Helix-turn-helix domain, rpiR family GIY02_09620 PF01380 SIS domain GIY02_09620 PF02685 Glucokinase GIY02_09625 PF04962 KduI/IolB family GIY02_09630 PF00171 Aldehyde dehydrogenase family GIY02_09640 PF05872 Bacterial protein of unknown function (DUF853) GIY02_09645 PF03739 Lipopolysaccharide export system permease LptF/LptG GIY02_09650 PF03739 Lipopolysaccharide export system permease LptF/LptG GIY02_09655 PF00883 Cytosol aminopeptidase family, catalytic domain GIY02_09655 PF02789 Cytosol aminopeptidase family, N-terminal domain GIY02_09660 PF04364 DNA polymerase III chi subunit, HolC GIY02_09665 PF10458 Valyl tRNA synthetase tRNA binding arm GIY02_09665 PF00133 tRNA synthetases class I (I, L, M and V) GIY02_09665 PF08264 Anticodon-binding domain of tRNA GIY02_09670 PF00583 Acetyltransferase (GNAT) family GIY02_09675 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GIY02_09680 PF06877 Regulator of ribonuclease activity B GIY02_09685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GIY02_09685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GIY02_09690 PF04074 YhcH/YjgK/YiaL GIY02_09700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GIY02_09700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GIY02_09705 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GIY02_09705 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GIY02_09710 PF01042 Endoribonuclease L-PSP GIY02_09715 PF07691 PA14 domain GIY02_09715 PF00728 Glycosyl hydrolase family 20, catalytic domain GIY02_09715 PF02838 Glycosyl hydrolase family 20, domain 2 GIY02_09720 PF00690 Cation transporter/ATPase, N-terminus GIY02_09720 PF00689 Cation transporting ATPase, C-terminus GIY02_09725 PF00356 Bacterial regulatory proteins, lacI family GIY02_09730 PF02378 Phosphotransferase system, EIIC GIY02_09730 PF00367 phosphotransferase system, EIIB GIY02_09735 PF00128 Alpha amylase, catalytic domain GIY02_09735 PF11941 Domain of unknown function (DUF3459) GIY02_09740 PF02378 Phosphotransferase system, EIIC GIY02_09745 PF11975 Family 4 glycosyl hydrolase C-terminal domain GIY02_09745 PF02056 Family 4 glycosyl hydrolase GIY02_09750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_09760 PF03477 ATP cone domain GIY02_09760 PF13597 Anaerobic ribonucleoside-triphosphate reductase GIY02_09770 PF00874 PRD domain GIY02_09770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_09770 PF08279 HTH domain GIY02_09770 PF05043 Mga helix-turn-helix domain GIY02_09775 PF10282 Lactonase, 7-bladed beta-propeller GIY02_09780 PF07071 KDGP aldolase GIY02_09785 PF03841 L-seryl-tRNA selenium transferase GIY02_09790 PF01979 Amidohydrolase family GIY02_09820 PF07361 Cytochrome b562 GIY02_09825 PF01523 Putative modulator of DNA gyrase GIY02_09830 PF04751 Protein of unknown function (DUF615) GIY02_09840 PF01225 Mur ligase family, catalytic domain GIY02_09840 PF02875 Mur ligase family, glutamate ligase domain GIY02_09840 PF08245 Mur ligase middle domain GIY02_09845 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GIY02_09850 PF02653 Branched-chain amino acid transport system / permease component GIY02_09855 PF02653 Branched-chain amino acid transport system / permease component GIY02_09860 PF00005 ABC transporter GIY02_09865 PF13407 Periplasmic binding protein domain GIY02_09870 PF00719 Inorganic pyrophosphatase GIY02_09875 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GIY02_09880 PF04357 TamB, inner membrane protein subunit of TAM complex GIY02_09885 PF17243 POTRA domain TamA domain 1 GIY02_09885 PF07244 Surface antigen variable number repeat GIY02_09885 PF01103 Surface antigen GIY02_09890 PF01625 Peptide methionine sulfoxide reductase GIY02_09895 PF00571 CBS domain GIY02_09895 PF03471 Transporter associated domain GIY02_09895 PF01595 Cyclin M transmembrane N-terminal domain GIY02_09900 PF06526 Protein of unknown function (DUF1107) GIY02_09905 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GIY02_09910 PF00459 Inositol monophosphatase family GIY02_09915 PF00149 Calcineurin-like phosphoesterase GIY02_09915 PF02872 5'-nucleotidase, C-terminal domain GIY02_09920 PF01638 HxlR-like helix-turn-helix GIY02_09925 PF05368 NmrA-like family GIY02_09930 PF12833 Helix-turn-helix domain GIY02_09935 PF00892 EamA-like transporter family GIY02_09940 PF01814 Hemerythrin HHE cation binding domain GIY02_09940 PF04405 Domain of Unknown function (DUF542) GIY02_09945 PF00324 Amino acid permease GIY02_09950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GIY02_09950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GIY02_09955 PF04225 Opacity-associated protein A LysM-like domain GIY02_09955 PF08525 Opacity-associated protein A N-terminal motif GIY02_09965 PF01281 Ribosomal protein L9, N-terminal domain GIY02_09965 PF03948 Ribosomal protein L9, C-terminal domain GIY02_09970 PF01084 Ribosomal protein S18 GIY02_09975 PF00436 Single-strand binding protein family GIY02_09980 PF01250 Ribosomal protein S6 GIY02_09985 PF07338 Protein of unknown function (DUF1471) GIY02_09990 PF07690 Major Facilitator Superfamily GIY02_09995 PF00596 Class II Aldolase and Adducin N-terminal domain GIY02_10000 PF01261 Xylose isomerase-like TIM barrel GIY02_10005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GIY02_10010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_10015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_10020 PF03611 PTS system sugar-specific permease component GIY02_10030 PF00455 DeoR C terminal sensor domain GIY02_10030 PF08220 DeoR-like helix-turn-helix domain GIY02_10035 PF00326 Prolyl oligopeptidase family GIY02_10040 PF07338 Protein of unknown function (DUF1471) GIY02_10045 PF07338 Protein of unknown function (DUF1471) GIY02_10050 PF18158 Adaptive response protein AidB N-terminal domain GIY02_10050 PF02770 Acyl-CoA dehydrogenase, middle domain GIY02_10050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GIY02_10055 PF08946 Osmosensory transporter coiled coil GIY02_10055 PF00083 Sugar (and other) transporter GIY02_10060 PF08032 RNA 2'-O ribose methyltransferase substrate binding GIY02_10060 PF00588 SpoU rRNA Methylase family GIY02_10065 PF08461 Ribonuclease R winged-helix domain GIY02_10065 PF17876 Cold shock domain GIY02_10065 PF00575 S1 RNA binding domain GIY02_10065 PF08206 Ribonuclease B OB domain GIY02_10065 PF00773 RNB domain GIY02_10070 PF02082 Transcriptional regulator GIY02_10075 PF00709 Adenylosuccinate synthetase GIY02_10080 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GIY02_10090 PF01145 SPFH domain / Band 7 family GIY02_10095 PF01145 SPFH domain / Band 7 family GIY02_10095 PF12221 Bacterial membrane protein N terminal GIY02_10100 PF13167 GTP-binding GTPase N-terminal GIY02_10100 PF16360 GTP-binding GTPase Middle Region GIY02_10100 PF01926 50S ribosome-binding GTPase GIY02_10105 PF17209 Hfq protein GIY02_10115 PF01119 DNA mismatch repair protein, C-terminal domain GIY02_10115 PF08676 MutL C terminal dimerisation domain GIY02_10120 PF01520 N-acetylmuramoyl-L-alanine amidase GIY02_10125 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GIY02_10130 PF03853 YjeF-related protein N-terminus GIY02_10130 PF01256 Carbohydrate kinase GIY02_10135 PF08331 Domain of unknown function (DUF1730) GIY02_10155 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_10160 PF00929 Exonuclease GIY02_10165 PF03193 RsgA GTPase GIY02_10170 PF02666 Phosphatidylserine decarboxylase GIY02_10175 PF00924 Mechanosensitive ion channel GIY02_10175 PF12795 Mechanosensitive ion channel porin domain GIY02_10175 PF12794 Mechanosensitive ion channel inner membrane domain 1 GIY02_10180 PF13520 Amino acid permease GIY02_10185 PF00152 tRNA synthetases class II (D, K and N) GIY02_10195 PF00890 FAD binding domain GIY02_10195 PF02910 Fumarate reductase flavoprotein C-term GIY02_10200 PF13085 2Fe-2S iron-sulfur cluster binding domain GIY02_10200 PF13183 4Fe-4S dicluster domain GIY02_10205 PF02300 Fumarate reductase subunit C GIY02_10210 PF02313 Fumarate reductase subunit D GIY02_10215 PF08212 Lipocalin-like domain GIY02_10220 PF00893 Small Multidrug Resistance protein GIY02_10225 PF08085 Entericidin EcnA/B family GIY02_10230 PF08085 Entericidin EcnA/B family GIY02_10235 PF01132 Elongation factor P (EF-P) OB domain GIY02_10235 PF08207 Elongation factor P (EF-P) KOW-like domain GIY02_10235 PF09285 Elongation factor P, C-terminal GIY02_10240 PF04055 Radical SAM superfamily GIY02_10255 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_10255 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_10260 PF13953 PapC C-terminal domain GIY02_10260 PF13954 PapC N-terminal domain GIY02_10260 PF00577 Outer membrane usher protein GIY02_10270 PF00664 ABC transporter transmembrane region GIY02_10270 PF00005 ABC transporter GIY02_10270 PF03412 Peptidase C39 family GIY02_10275 PF15922 YjeJ-like GIY02_10280 PF13698 Domain of unknown function (DUF4156) GIY02_10285 PF00118 TCP-1/cpn60 chaperonin family GIY02_10290 PF00166 Chaperonin 10 Kd subunit GIY02_10295 PF13520 Amino acid permease GIY02_10300 PF04186 FxsA cytoplasmic membrane protein GIY02_10305 PF10415 Fumarase C C-terminus GIY02_10305 PF00206 Lyase GIY02_10310 PF03605 Anaerobic c4-dicarboxylate membrane transporter GIY02_10315 PF03091 CutA1 divalent ion tolerance protein GIY02_10320 PF11412 Disulphide bond corrector protein DsbC GIY02_10320 PF02683 Cytochrome C biogenesis protein transmembrane region GIY02_10375 PF01522 Polysaccharide deacetylase GIY02_10375 PF14883 Hypothetical glycosyl hydrolase family 13 GIY02_10380 PF00535 Glycosyl transferase family 2 GIY02_10395 PF03741 Integral membrane protein TerC family GIY02_10405 PF01556 DnaJ C terminal domain GIY02_10405 PF00226 DnaJ domain GIY02_10420 PF06406 StbA protein GIY02_10430 PF02056 Family 4 glycosyl hydrolase GIY02_10430 PF11975 Family 4 glycosyl hydrolase C-terminal domain GIY02_10435 PF12833 Helix-turn-helix domain GIY02_10440 PF00083 Sugar (and other) transporter GIY02_10440 PF08946 Osmosensory transporter coiled coil GIY02_10450 PF08274 PhnA Zinc-Ribbon GIY02_10450 PF03831 PhnA domain GIY02_10455 PF06983 3-demethylubiquinone-9 3-methyltransferase GIY02_10460 PF07702 UTRA domain GIY02_10460 PF00392 Bacterial regulatory proteins, gntR family GIY02_10465 PF06754 Phosphonate metabolism protein PhnG GIY02_10470 PF05845 Bacterial phosphonate metabolism protein (PhnH) GIY02_10475 PF05861 Bacterial phosphonate metabolism protein (PhnI) GIY02_10480 PF06007 Phosphonate metabolism protein PhnJ GIY02_10485 PF00005 ABC transporter GIY02_10490 PF00005 ABC transporter GIY02_10495 PF07969 Amidohydrolase family GIY02_10505 PF12706 Beta-lactamase superfamily domain GIY02_10515 PF00072 Response regulator receiver domain GIY02_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_10515 PF13426 PAS domain GIY02_10520 PF00005 ABC transporter GIY02_10525 PF02653 Branched-chain amino acid transport system / permease component GIY02_10530 PF13407 Periplasmic binding protein domain GIY02_10535 PF00486 Transcriptional regulatory protein, C terminal GIY02_10535 PF00072 Response regulator receiver domain GIY02_10550 PF08238 Sel1 repeat GIY02_10555 PF00375 Sodium:dicarboxylate symporter family GIY02_10560 PF00501 AMP-binding enzyme GIY02_10560 PF13193 AMP-binding enzyme C-terminal domain GIY02_10560 PF16177 Acetyl-coenzyme A synthetase N-terminus GIY02_10565 PF04341 Protein of unknown function, DUF485 GIY02_10570 PF00474 Sodium:solute symporter family GIY02_10575 PF00419 Fimbrial protein GIY02_10575 PF09160 FimH, mannose binding GIY02_10580 PF00419 Fimbrial protein GIY02_10585 PF13954 PapC N-terminal domain GIY02_10585 PF13953 PapC C-terminal domain GIY02_10585 PF00577 Outer membrane usher protein GIY02_10590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_10590 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_10595 PF00419 Fimbrial protein GIY02_10600 PF04172 LrgB-like family GIY02_10605 PF03788 LrgA family GIY02_10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_10610 PF03466 LysR substrate binding domain GIY02_10615 PF00999 Sodium/hydrogen exchanger family GIY02_10620 PF00860 Permease family GIY02_10625 PF02798 Glutathione S-transferase, N-terminal domain GIY02_10625 PF00043 Glutathione S-transferase, C-terminal domain GIY02_10630 PF00376 MerR family regulatory protein GIY02_10630 PF09278 MerR, DNA binding GIY02_10635 PF12833 Helix-turn-helix domain GIY02_10645 PF15940 Family of unknown function GIY02_10655 PF01464 Transglycosylase SLT domain GIY02_10655 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_10680 PF00436 Single-strand binding protein family GIY02_10685 PF17755 UvrA DNA-binding domain GIY02_10685 PF17760 UvrA interaction domain GIY02_10685 PF00005 ABC transporter GIY02_10700 PF04237 YjbR GIY02_10705 PF01894 Uncharacterised protein family UPF0047 GIY02_10710 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) GIY02_10715 PF00155 Aminotransferase class I and II GIY02_10720 PF00842 Alanine racemase, C-terminal domain GIY02_10720 PF01168 Alanine racemase, N-terminal domain GIY02_10725 PF00772 DnaB-like helicase N terminal domain GIY02_10725 PF03796 DnaB-like helicase C terminal domain GIY02_10730 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_10730 PF00107 Zinc-binding dehydrogenase GIY02_10735 PF09583 Phage shock protein G (Phageshock_PspG) GIY02_10740 PF01207 Dihydrouridine synthase (Dus) GIY02_10750 PF01475 Ferric uptake regulator family GIY02_10755 PF05532 CsbD-like GIY02_10760 PF01554 MatE GIY02_10765 PF01726 LexA DNA binding domain GIY02_10765 PF00717 Peptidase S24-like GIY02_10770 PF01219 Prokaryotic diacylglycerol kinase GIY02_10775 PF01553 Acyltransferase GIY02_10780 PF01040 UbiA prenyltransferase family GIY02_10785 PF04345 Chorismate lyase GIY02_10790 PF07148 Maltose operon periplasmic protein precursor (MalM) GIY02_10795 PF02264 LamB porin GIY02_10800 PF00005 ABC transporter GIY02_10800 PF17912 MalK OB fold domain GIY02_10805 PF01547 Bacterial extracellular solute-binding protein GIY02_10810 PF14785 Maltose transport system permease protein MalF P2 domain GIY02_10810 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_10815 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_10820 PF06146 Phosphate-starvation-inducible E GIY02_10825 PF03313 Serine dehydratase alpha chain GIY02_10840 PF01042 Endoribonuclease L-PSP GIY02_10845 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_10845 PF14602 Hexapeptide repeat of succinyl-transferase GIY02_10845 PF12804 MobA-like NTP transferase domain GIY02_10850 PF00342 Phosphoglucose isomerase GIY02_10855 PF01842 ACT domain GIY02_10855 PF00696 Amino acid kinase family GIY02_10860 PF01758 Sodium Bile acid symporter family GIY02_10875 PF11656 YjbD family (DUF3811) GIY02_10880 PF00849 RNA pseudouridylate synthase GIY02_10880 PF01479 S4 domain GIY02_10885 PF10820 Protein of unknown function (DUF2543) GIY02_10890 PF03575 Peptidase family S51 GIY02_10895 PF02690 Na+/Pi-cotransporter GIY02_10900 PF02965 Vitamin B12 dependent methionine synthase, activation domain GIY02_10900 PF02310 B12 binding domain GIY02_10900 PF02607 B12 binding domain GIY02_10900 PF00809 Pterin binding enzyme GIY02_10900 PF02574 Homocysteine S-methyltransferase GIY02_10905 PF09339 IclR helix-turn-helix domain GIY02_10905 PF01614 Bacterial transcriptional regulator GIY02_10910 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) GIY02_10915 PF00463 Isocitrate lyase family GIY02_10920 PF01274 Malate synthase GIY02_10925 PF04204 Homoserine O-succinyltransferase GIY02_10955 PF01808 AICARFT/IMPCHase bienzyme GIY02_10955 PF02142 MGS-like domain GIY02_10960 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GIY02_10960 PF02843 Phosphoribosylglycinamide synthetase, C domain GIY02_10960 PF02844 Phosphoribosylglycinamide synthetase, N domain GIY02_10970 PF00512 His Kinase A (phospho-acceptor) domain GIY02_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_10975 PF13801 Heavy-metal resistance GIY02_10980 PF07356 Protein of unknown function (DUF1481) GIY02_10985 PF00216 Bacterial DNA-binding protein GIY02_10990 PF04222 Protein of unknown function (DUF416) GIY02_11000 PF01208 Uroporphyrinogen decarboxylase (URO-D) GIY02_11005 PF09297 NADH pyrophosphatase zinc ribbon domain GIY02_11005 PF00293 NUDIX domain GIY02_11010 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GIY02_11015 PF13667 ThiC-associated domain GIY02_11015 PF01964 Radical SAM ThiC family GIY02_11020 PF02581 Thiamine monophosphate synthase GIY02_11025 PF00899 ThiF family GIY02_11030 PF02597 ThiS family GIY02_11035 PF05690 Thiazole biosynthesis protein ThiG GIY02_11040 PF04055 Radical SAM superfamily GIY02_11040 PF06968 Biotin and Thiamin Synthesis associated domain GIY02_11045 PF00990 Diguanylate cyclase, GGDEF domain GIY02_11050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_11055 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GIY02_11060 PF03605 Anaerobic c4-dicarboxylate membrane transporter GIY02_11065 PF00623 RNA polymerase Rpb1, domain 2 GIY02_11065 PF04983 RNA polymerase Rpb1, domain 3 GIY02_11065 PF04997 RNA polymerase Rpb1, domain 1 GIY02_11065 PF05000 RNA polymerase Rpb1, domain 4 GIY02_11065 PF04998 RNA polymerase Rpb1, domain 5 GIY02_11070 PF04561 RNA polymerase Rpb2, domain 2 GIY02_11070 PF10385 RNA polymerase beta subunit external 1 domain GIY02_11070 PF00562 RNA polymerase Rpb2, domain 6 GIY02_11070 PF04563 RNA polymerase beta subunit GIY02_11070 PF04565 RNA polymerase Rpb2, domain 3 GIY02_11070 PF04560 RNA polymerase Rpb2, domain 7 GIY02_11075 PF16320 Ribosomal protein L7/L12 dimerisation domain GIY02_11075 PF00542 Ribosomal protein L7/L12 C-terminal domain GIY02_11080 PF00466 Ribosomal protein L10 GIY02_11085 PF00687 Ribosomal protein L1p/L10e family GIY02_11090 PF00298 Ribosomal protein L11, RNA binding domain GIY02_11090 PF03946 Ribosomal protein L11, N-terminal domain GIY02_11095 PF00467 KOW motif GIY02_11095 PF02357 Transcription termination factor nusG GIY02_11100 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GIY02_11105 PF03143 Elongation factor Tu C-terminal domain GIY02_11105 PF03144 Elongation factor Tu domain 2 GIY02_11105 PF00009 Elongation factor Tu GTP binding domain GIY02_11130 PF00485 Phosphoribulokinase / Uridine kinase family GIY02_11135 PF08279 HTH domain GIY02_11135 PF03099 Biotin/lipoate A/B protein ligase family GIY02_11135 PF02237 Biotin protein ligase C terminal domain GIY02_11140 PF01565 FAD binding domain GIY02_11140 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GIY02_11170 PF01177 Asp/Glu/Hydantoin racemase GIY02_11175 PF00593 TonB dependent receptor GIY02_11175 PF07715 TonB-dependent Receptor Plug Domain GIY02_11180 PF05958 tRNA (Uracil-5-)-methyltransferase GIY02_11185 PF07226 Protein of unknown function (DUF1422) GIY02_11190 PF00440 Bacterial regulatory proteins, tetR family GIY02_11195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GIY02_11195 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_11200 PF03466 LysR substrate binding domain GIY02_11205 PF00206 Lyase GIY02_11205 PF14698 Argininosuccinate lyase C-terminal GIY02_11210 PF00696 Amino acid kinase family GIY02_11215 PF02774 Semialdehyde dehydrogenase, dimerisation domain GIY02_11215 PF01118 Semialdehyde dehydrogenase, NAD binding domain GIY02_11220 PF01546 Peptidase family M20/M25/M40 GIY02_11220 PF07687 Peptidase dimerisation domain GIY02_11225 PF00311 Phosphoenolpyruvate carboxylase GIY02_11230 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GIY02_11235 PF12833 Helix-turn-helix domain GIY02_11240 PF00923 Transaldolase/Fructose-6-phosphate aldolase GIY02_11245 PF00465 Iron-containing alcohol dehydrogenase GIY02_11250 PF00892 EamA-like transporter family GIY02_11255 PF02219 Methylenetetrahydrofolate reductase GIY02_11260 PF00696 Amino acid kinase family GIY02_11260 PF03447 Homoserine dehydrogenase, NAD binding domain GIY02_11260 PF00742 Homoserine dehydrogenase GIY02_11265 PF01053 Cys/Met metabolism PLP-dependent enzyme GIY02_11270 PF01340 Met Apo-repressor, MetJ GIY02_11275 PF01197 Ribosomal protein L31 GIY02_11280 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GIY02_11280 PF00270 DEAD/DEAH box helicase GIY02_11280 PF00271 Helicase conserved C-terminal domain GIY02_11280 PF17764 3′ DNA-binding domain (3′BD) GIY02_11280 PF18074 Primosomal protein N C-terminal domain GIY02_11285 PF00356 Bacterial regulatory proteins, lacI family GIY02_11290 PF05036 Sporulation related domain GIY02_11295 PF00227 Proteasome subunit GIY02_11300 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_11300 PF10431 C-terminal, D2-small domain, of ClpB protein GIY02_11300 PF07724 AAA domain (Cdc48 subfamily) GIY02_11305 PF01040 UbiA prenyltransferase family GIY02_11310 PF03737 Aldolase/RraA GIY02_11315 PF00365 Phosphofructokinase GIY02_11320 PF16916 Dimerisation domain of Zinc Transporter GIY02_11320 PF01545 Cation efflux family GIY02_11325 PF07813 LTXXQ motif family protein GIY02_11330 PF00486 Transcriptional regulatory protein, C terminal GIY02_11330 PF00072 Response regulator receiver domain GIY02_11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_11335 PF00672 HAMP domain GIY02_11335 PF16527 Two-component sensor protein CpxA, periplasmic domain GIY02_11335 PF00512 His Kinase A (phospho-acceptor) domain GIY02_11340 PF03473 MOSC domain GIY02_11340 PF03475 3-alpha domain GIY02_11345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GIY02_11345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GIY02_11350 PF06379 L-rhamnose-proton symport protein (RhaT) GIY02_11355 PF02311 AraC-like ligand binding domain GIY02_11355 PF12833 Helix-turn-helix domain GIY02_11360 PF02311 AraC-like ligand binding domain GIY02_11360 PF12833 Helix-turn-helix domain GIY02_11370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GIY02_11370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_11375 PF06134 L-rhamnose isomerase (RhaA) GIY02_11380 PF00596 Class II Aldolase and Adducin N-terminal domain GIY02_11385 PF00465 Iron-containing alcohol dehydrogenase GIY02_11390 PF05336 L-rhamnose mutarotase GIY02_11400 PF04074 YhcH/YjgK/YiaL GIY02_11405 PF00701 Dihydrodipicolinate synthetase family GIY02_11410 PF00294 pfkB family carbohydrate kinase GIY02_11420 PF03591 AzlC protein GIY02_11435 PF02634 FdhD/NarQ family GIY02_11445 PF09163 Formate dehydrogenase N, transmembrane GIY02_11445 PF13247 4Fe-4S dicluster domain GIY02_11450 PF01292 Prokaryotic cytochrome b561 GIY02_11455 PF04216 Protein involved in formate dehydrogenase formation GIY02_11460 PF07859 alpha/beta hydrolase fold GIY02_11465 PF00583 Acetyltransferase (GNAT) family GIY02_11465 PF09500 Putative thioesterase (yiiD_Cterm) GIY02_11470 PF02580 D-Tyr-tRNA(Tyr) deacylase GIY02_11475 PF03631 Virulence factor BrkB GIY02_11480 PF13419 Haloacid dehalogenase-like hydrolase GIY02_11490 PF00120 Glutamine synthetase, catalytic domain GIY02_11490 PF03951 Glutamine synthetase, beta-Grasp domain GIY02_11495 PF00989 PAS fold GIY02_11495 PF00512 His Kinase A (phospho-acceptor) domain GIY02_11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_11500 PF00072 Response regulator receiver domain GIY02_11500 PF02954 Bacterial regulatory protein, Fis family GIY02_11500 PF00158 Sigma-54 interaction domain GIY02_11505 PF04055 Radical SAM superfamily GIY02_11505 PF06969 HemN C-terminal domain GIY02_11510 PF04220 Der GTPase activator (YihI) GIY02_11525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GIY02_11525 PF00476 DNA polymerase family A GIY02_11525 PF01612 3'-5' exonuclease GIY02_11525 PF01367 5'-3' exonuclease, C-terminal SAM fold GIY02_11535 PF01323 DSBA-like thioredoxin domain GIY02_11540 PF01636 Phosphotransferase enzyme family GIY02_11545 PF06288 Protein of unknown function (DUF1040) GIY02_11550 PF12804 MobA-like NTP transferase domain GIY02_11555 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GIY02_11580 PF12724 Flavodoxin domain GIY02_11585 PF02386 Cation transport protein GIY02_11595 PF00557 Metallopeptidase family M24 GIY02_11605 PF02803 Thiolase, C-terminal domain GIY02_11605 PF00108 Thiolase, N-terminal domain GIY02_11610 PF00175 Oxidoreductase NAD-binding domain GIY02_11610 PF00970 Oxidoreductase FAD-binding domain GIY02_11615 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GIY02_11620 PF02357 Transcription termination factor nusG GIY02_11625 PF01026 TatD related DNase GIY02_11630 PF00902 Sec-independent protein translocase protein (TatC) GIY02_11640 PF02416 mttA/Hcf106 family GIY02_11645 PF03109 ABC1 family GIY02_11650 PF02036 SCP-2 sterol transfer family GIY02_11655 PF01209 ubiE/COQ5 methyltransferase family GIY02_11660 PF02646 RmuC family GIY02_11665 PF01048 Phosphorylase superfamily GIY02_11670 PF01738 Dienelactone hydrolase family GIY02_11675 PF08267 Cobalamin-independent synthase, N-terminal domain GIY02_11675 PF01717 Cobalamin-independent synthase, Catalytic domain GIY02_11680 PF03466 LysR substrate binding domain GIY02_11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_11685 PF00892 EamA-like transporter family GIY02_11695 PF12146 Serine aminopeptidase, S33 GIY02_11700 PF01810 LysE type translocator GIY02_11710 PF01810 LysE type translocator GIY02_11715 PF00270 DEAD/DEAH box helicase GIY02_11715 PF00271 Helicase conserved C-terminal domain GIY02_11715 PF00570 HRDC domain GIY02_11715 PF16124 RecQ zinc-binding GIY02_11715 PF09382 RQC domain GIY02_11720 PF02253 Phospholipase A1 GIY02_11725 PF03061 Thioesterase superfamily GIY02_11730 PF00892 EamA-like transporter family GIY02_11735 PF01544 CorA-like Mg2+ transporter protein GIY02_11740 PF13361 UvrD-like helicase C-terminal domain GIY02_11740 PF00580 UvrD/REP helicase N-terminal domain GIY02_11745 PF13419 Haloacid dehalogenase-like hydrolase GIY02_11750 PF00589 Phage integrase family GIY02_11750 PF02899 Phage integrase, N-terminal SAM-like domain GIY02_11755 PF04340 Protein of unknown function, DUF484 GIY02_11760 PF01678 Diaminopimelate epimerase GIY02_11765 PF13627 Prokaryotic lipoprotein-attachment site GIY02_11770 PF01491 Frataxin-like domain GIY02_11775 PF12633 Adenylate cyclase NT domain GIY02_11775 PF01295 Adenylate cyclase, class-I GIY02_11780 PF03900 Porphobilinogen deaminase, C-terminal domain GIY02_11780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GIY02_11785 PF02602 Uroporphyrinogen-III synthase HemD GIY02_11790 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GIY02_11795 PF07719 Tetratricopeptide repeat GIY02_11795 PF07219 HemY protein N-terminus GIY02_11825 PF00324 Amino acid permease GIY02_11830 PF03808 Glycosyl transferase WecB/TagA/CpsF family GIY02_11835 PF06899 WzyE protein, O-antigen assembly polymerase GIY02_11840 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 GIY02_11845 PF01943 Polysaccharide biosynthesis protein GIY02_11850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GIY02_11860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIY02_11860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GIY02_11860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GIY02_11865 PF02350 UDP-N-acetylglucosamine 2-epimerase GIY02_11870 PF02706 Chain length determinant protein GIY02_11875 PF00953 Glycosyl transferase family 4 GIY02_11880 PF07497 Rho termination factor, RNA-binding domain GIY02_11880 PF07498 Rho termination factor, N-terminal domain GIY02_11880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GIY02_11885 PF00085 Thioredoxin GIY02_11890 PF00271 Helicase conserved C-terminal domain GIY02_11890 PF00270 DEAD/DEAH box helicase GIY02_11895 PF02541 Ppx/GppA phosphatase family GIY02_11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_11900 PF03466 LysR substrate binding domain GIY02_11910 PF04474 Protein of unknown function (DUF554) GIY02_11915 PF13361 UvrD-like helicase C-terminal domain GIY02_11915 PF00580 UvrD/REP helicase N-terminal domain GIY02_11930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GIY02_11930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GIY02_11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_11935 PF03466 LysR substrate binding domain GIY02_11940 PF00585 C-terminal regulatory domain of Threonine dehydratase GIY02_11940 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_11945 PF00920 Dehydratase family GIY02_11950 PF01063 Amino-transferase class IV GIY02_11960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_11960 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_11960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_11965 PF08046 IlvGEDA operon leader peptide GIY02_11970 PF01078 Magnesium chelatase, subunit ChlI GIY02_11970 PF13335 Magnesium chelatase, subunit ChlI C-terminal GIY02_11975 PF04219 Protein of unknown function, DUF GIY02_11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_11980 PF03466 LysR substrate binding domain GIY02_12020 PF00392 Bacterial regulatory proteins, gntR family GIY02_12020 PF07729 FCD domain GIY02_12025 PF07690 Major Facilitator Superfamily GIY02_12030 PF00356 Bacterial regulatory proteins, lacI family GIY02_12035 PF00294 pfkB family carbohydrate kinase GIY02_12040 PF13407 Periplasmic binding protein domain GIY02_12045 PF02653 Branched-chain amino acid transport system / permease component GIY02_12050 PF00005 ABC transporter GIY02_12055 PF05025 RbsD / FucU transport protein family GIY02_12060 PF02705 K+ potassium transporter GIY02_12065 PF07728 AAA domain (dynein-related subfamily) GIY02_12065 PF12592 Protein of unknown function (DUF3763) GIY02_12065 PF17868 AAA lid domain GIY02_12070 PF05762 VWA domain containing CoxE-like protein GIY02_12075 PF03590 Aspartate-ammonia ligase GIY02_12080 PF01037 Lrp/AsnC ligand binding domain GIY02_12085 PF00258 Flavodoxin GIY02_12090 PF13932 GidA associated domain GIY02_12090 PF01134 Glucose inhibited division protein A GIY02_12095 PF02527 rRNA small subunit methyltransferase G GIY02_12100 PF03899 ATP synthase I chain GIY02_12105 PF00119 ATP synthase A chain GIY02_12110 PF00137 ATP synthase subunit C GIY02_12115 PF00430 ATP synthase B/B' CF(0) GIY02_12120 PF00213 ATP synthase delta (OSCP) subunit GIY02_12125 PF02874 ATP synthase alpha/beta family, beta-barrel domain GIY02_12125 PF00306 ATP synthase alpha/beta chain, C terminal domain GIY02_12125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GIY02_12130 PF00231 ATP synthase GIY02_12135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GIY02_12135 PF02874 ATP synthase alpha/beta family, beta-barrel domain GIY02_12140 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GIY02_12140 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GIY02_12150 PF01380 SIS domain GIY02_12160 PF12849 PBP superfamily domain GIY02_12165 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_12170 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_12175 PF00005 ABC transporter GIY02_12180 PF01895 PhoU domain GIY02_12190 PF11471 Maltoporin periplasmic N-terminal extension GIY02_12190 PF02264 LamB porin GIY02_12195 PF00756 Putative esterase GIY02_12195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GIY02_12205 PF13419 Haloacid dehalogenase-like hydrolase GIY02_12210 PF00860 Permease family GIY02_12215 PF03358 NADPH-dependent FMN reductase GIY02_12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_12230 PF03466 LysR substrate binding domain GIY02_12235 PF07690 Major Facilitator Superfamily GIY02_12240 PF01926 50S ribosome-binding GTPase GIY02_12240 PF10396 GTP-binding protein TrmE N-terminus GIY02_12240 PF12631 MnmE helical domain GIY02_12245 PF02096 60Kd inner membrane protein GIY02_12245 PF14849 YidC periplasmic domain GIY02_12250 PF01809 Putative membrane protein insertion efficiency factor GIY02_12255 PF00825 Ribonuclease P GIY02_12260 PF00468 Ribosomal protein L34 GIY02_12265 PF08299 Bacterial dnaA protein helix-turn-helix GIY02_12265 PF00308 Bacterial dnaA protein GIY02_12265 PF11638 DnaA N-terminal domain GIY02_12270 PF02767 DNA polymerase III beta subunit, central domain GIY02_12270 PF00712 DNA polymerase III beta subunit, N-terminal domain GIY02_12270 PF02768 DNA polymerase III beta subunit, C-terminal domain GIY02_12275 PF02463 RecF/RecN/SMC N terminal domain GIY02_12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_12280 PF00204 DNA gyrase B GIY02_12280 PF00986 DNA gyrase B subunit, carboxyl terminus GIY02_12280 PF01751 Toprim domain GIY02_12280 PF18053 DNA gyrase B subunit insert domain GIY02_12300 PF07729 FCD domain GIY02_12300 PF00392 Bacterial regulatory proteins, gntR family GIY02_12305 PF05035 2-keto-3-deoxy-galactonokinase GIY02_12310 PF01081 KDPG and KHG aldolase GIY02_12315 PF13378 Enolase C-terminal domain-like GIY02_12315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GIY02_12320 PF07690 Major Facilitator Superfamily GIY02_12325 PF12566 Protein of unknown function (DUF3748) GIY02_12325 PF07676 WD40-like Beta Propeller Repeat GIY02_12330 PF07119 Protein of unknown function (DUF1375) GIY02_12335 PF00011 Hsp20/alpha crystallin family GIY02_12340 PF00011 Hsp20/alpha crystallin family GIY02_12345 PF02080 TrkA-C domain GIY02_12345 PF06826 Predicted Permease Membrane Region GIY02_12350 PF00392 Bacterial regulatory proteins, gntR family GIY02_12350 PF07702 UTRA domain GIY02_12355 PF02378 Phosphotransferase system, EIIC GIY02_12355 PF00367 phosphotransferase system, EIIB GIY02_12360 PF11975 Family 4 glycosyl hydrolase C-terminal domain GIY02_12360 PF02056 Family 4 glycosyl hydrolase GIY02_12365 PF02656 Domain of unknown function (DUF202) GIY02_12370 PF02656 Domain of unknown function (DUF202) GIY02_12380 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_12385 PF02447 GntP family permease GIY02_12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_12390 PF03466 LysR substrate binding domain GIY02_12395 PF07690 Major Facilitator Superfamily GIY02_12420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_12420 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_12420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_12425 PF01842 ACT domain GIY02_12430 PF00072 Response regulator receiver domain GIY02_12430 PF00196 Bacterial regulatory proteins, luxR family GIY02_12435 PF07730 Histidine kinase GIY02_12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_12435 PF05231 MASE1 GIY02_12440 PF07690 Major Facilitator Superfamily GIY02_12445 PF07690 Major Facilitator Superfamily GIY02_12450 PF06711 Protein of unknown function (DUF1198) GIY02_12465 PF07690 Major Facilitator Superfamily GIY02_12475 PF00266 Aminotransferase class-V GIY02_12480 PF07702 UTRA domain GIY02_12480 PF00392 Bacterial regulatory proteins, gntR family GIY02_12485 PF01547 Bacterial extracellular solute-binding protein GIY02_12490 PF00005 ABC transporter GIY02_12490 PF08402 TOBE domain GIY02_12495 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_12500 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_12510 PF02264 LamB porin GIY02_12515 PF02378 Phosphotransferase system, EIIC GIY02_12515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_12520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_12525 PF00356 Bacterial regulatory proteins, lacI family GIY02_12540 PF00892 EamA-like transporter family GIY02_12545 PF01797 Transposase IS200 like GIY02_12550 PF12323 Helix-turn-helix domain GIY02_12550 PF01385 Probable transposase GIY02_12550 PF07282 Putative transposase DNA-binding domain GIY02_12575 PF03466 LysR substrate binding domain GIY02_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_12580 PF07690 Major Facilitator Superfamily GIY02_12585 PF00440 Bacterial regulatory proteins, tetR family GIY02_12595 PF00529 HlyD membrane-fusion protein of T1SS GIY02_12595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_12600 PF00873 AcrB/AcrD/AcrF family GIY02_12605 PF02321 Outer membrane efflux protein GIY02_12610 PF13580 SIS domain GIY02_12615 PF00367 phosphotransferase system, EIIB GIY02_12615 PF02378 Phosphotransferase system, EIIC GIY02_12620 PF03180 NLPA lipoprotein GIY02_12625 PF00293 NUDIX domain GIY02_12630 PF12706 Beta-lactamase superfamily domain GIY02_12635 PF01965 DJ-1/PfpI family GIY02_12640 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_12640 PF00107 Zinc-binding dehydrogenase GIY02_12645 PF03992 Antibiotic biosynthesis monooxygenase GIY02_12650 PF00107 Zinc-binding dehydrogenase GIY02_12650 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_12690 PF13802 Galactose mutarotase-like GIY02_12690 PF01055 Glycosyl hydrolases family 31 GIY02_12695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_12695 PF08279 HTH domain GIY02_12695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_12695 PF05043 Mga helix-turn-helix domain GIY02_12695 PF00874 PRD domain GIY02_12700 PF02378 Phosphotransferase system, EIIC GIY02_12700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_12700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_12705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_12710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_12715 PF01116 Fructose-bisphosphate aldolase class-II GIY02_12720 PF01116 Fructose-bisphosphate aldolase class-II GIY02_12725 PF00480 ROK family GIY02_12740 PF11975 Family 4 glycosyl hydrolase C-terminal domain GIY02_12740 PF02056 Family 4 glycosyl hydrolase GIY02_12745 PF00367 phosphotransferase system, EIIB GIY02_12745 PF02378 Phosphotransferase system, EIIC GIY02_12750 PF05170 AsmA family GIY02_12755 PF00860 Permease family GIY02_12760 PF03616 Sodium/glutamate symporter GIY02_12765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_12765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GIY02_12770 PF00230 Major intrinsic protein GIY02_12775 PF06005 Cell division protein ZapB GIY02_12785 PF02611 CDP-diacylglycerol pyrophosphatase GIY02_12795 PF00121 Triosephosphate isomerase GIY02_12800 PF07305 Protein of unknown function (DUF1454) GIY02_12805 PF05656 Protein of unknown function (DUF805) GIY02_12810 PF00175 Oxidoreductase NAD-binding domain GIY02_12810 PF00970 Oxidoreductase FAD-binding domain GIY02_12815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GIY02_12820 PF17191 RecG wedge domain GIY02_12820 PF00271 Helicase conserved C-terminal domain GIY02_12820 PF00270 DEAD/DEAH box helicase GIY02_12825 PF00588 SpoU rRNA Methylase family GIY02_12825 PF12105 SpoU, rRNA methylase, C-terminal GIY02_12830 PF04607 Region found in RelA / SpoT proteins GIY02_12830 PF02824 TGS domain GIY02_12830 PF13291 ACT domain GIY02_12835 PF01192 RNA polymerase Rpb6 GIY02_12840 PF00625 Guanylate kinase GIY02_12845 PF01653 NAD-dependent DNA ligase adenylation domain GIY02_12845 PF03120 NAD-dependent DNA ligase OB-fold domain GIY02_12850 PF03458 UPF0126 domain GIY02_12855 PF08340 Domain of unknown function (DUF1732) GIY02_12855 PF03755 YicC-like family, N-terminal region GIY02_12860 PF01138 3' exoribonuclease family, domain 1 GIY02_12860 PF03725 3' exoribonuclease family, domain 2 GIY02_12865 PF00156 Phosphoribosyl transferase domain GIY02_12870 PF00440 Bacterial regulatory proteins, tetR family GIY02_12875 PF00692 dUTPase GIY02_12880 PF04127 DNA / pantothenate metabolism flavoprotein GIY02_12880 PF02441 Flavoprotein GIY02_12885 PF04002 RadC-like JAB domain GIY02_12890 PF00830 Ribosomal L28 family GIY02_12895 PF00471 Ribosomal protein L33 GIY02_12900 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GIY02_12900 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GIY02_12900 PF06827 Zinc finger found in FPG and IleRS GIY02_12905 PF01467 Cytidylyltransferase-like GIY02_12910 PF00535 Glycosyl transferase family 2 GIY02_12915 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GIY02_12920 PF00535 Glycosyl transferase family 2 GIY02_12930 PF00534 Glycosyl transferases group 1 GIY02_12930 PF13439 Glycosyltransferase Family 4 GIY02_12935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GIY02_12950 PF04932 O-Antigen ligase GIY02_12960 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GIY02_12965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GIY02_12970 PF01370 NAD dependent epimerase/dehydratase family GIY02_12975 PF00155 Aminotransferase class I and II GIY02_12980 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_12980 PF00107 Zinc-binding dehydrogenase GIY02_12990 PF00535 Glycosyl transferase family 2 GIY02_12995 PF04748 Divergent polysaccharide deacetylase GIY02_13000 PF01551 Peptidase family M23 GIY02_13005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GIY02_13005 PF01676 Metalloenzyme superfamily GIY02_13010 PF00581 Rhodanese-like domain GIY02_13015 PF00462 Glutaredoxin GIY02_13020 PF02556 Preprotein translocase subunit SecB GIY02_13025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GIY02_13025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GIY02_13030 PF06426 Serine acetyltransferase, N-terminal GIY02_13030 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_13035 PF00588 SpoU rRNA Methylase family GIY02_13040 PF01070 FMN-dependent dehydrogenase GIY02_13045 PF07729 FCD domain GIY02_13045 PF00392 Bacterial regulatory proteins, gntR family GIY02_13050 PF02652 L-lactate permease GIY02_13055 PF10928 Protein of unknown function (DUF2810) GIY02_13065 PF05068 Mannitol repressor GIY02_13070 PF01232 Mannitol dehydrogenase Rossmann domain GIY02_13070 PF08125 Mannitol dehydrogenase C-terminal domain GIY02_13075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_13075 PF02378 Phosphotransferase system, EIIC GIY02_13075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_13080 PF11742 Protein of unknown function (DUF3302) GIY02_13085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_13085 PF00529 HlyD membrane-fusion protein of T1SS GIY02_13090 PF00043 Glutathione S-transferase, C-terminal domain GIY02_13090 PF13417 Glutathione S-transferase, N-terminal domain GIY02_13095 PF12390 Selenocysteine synthase N terminal GIY02_13095 PF03841 L-seryl-tRNA selenium transferase GIY02_13100 PF09107 Elongation factor SelB, winged helix GIY02_13100 PF09106 Elongation factor SelB, winged helix GIY02_13100 PF03144 Elongation factor Tu domain 2 GIY02_13100 PF00009 Elongation factor Tu GTP binding domain GIY02_13105 PF00465 Iron-containing alcohol dehydrogenase GIY02_13110 PF12800 4Fe-4S binding domain GIY02_13110 PF13247 4Fe-4S dicluster domain GIY02_13120 PF00128 Alpha amylase, catalytic domain GIY02_13125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GIY02_13130 PF12833 Helix-turn-helix domain GIY02_13135 PF02653 Branched-chain amino acid transport system / permease component GIY02_13140 PF00005 ABC transporter GIY02_13145 PF13407 Periplasmic binding protein domain GIY02_13155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GIY02_13155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_13160 PF05360 yiaA/B two helix domain GIY02_13165 PF01757 Acyltransferase family GIY02_13170 PF13983 YsaB-like lipoprotein GIY02_13175 PF02091 Glycyl-tRNA synthetase alpha subunit GIY02_13180 PF02092 Glycyl-tRNA synthetase beta subunit GIY02_13180 PF05746 DALR anticodon binding domain GIY02_13185 PF00005 ABC transporter GIY02_13185 PF12848 ABC transporter GIY02_13190 PF00313 'Cold-shock' DNA-binding domain GIY02_13195 PF01381 Helix-turn-helix GIY02_13200 PF07690 Major Facilitator Superfamily GIY02_13205 PF11254 Protein of unknown function (DUF3053) GIY02_13210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIY02_13210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GIY02_13220 PF00294 pfkB family carbohydrate kinase GIY02_13230 PF00356 Bacterial regulatory proteins, lacI family GIY02_13235 PF13488 Glycine zipper GIY02_13235 PF00691 OmpA family GIY02_13240 PF18364 Molybdopterin oxidoreductase N-terminal domain GIY02_13240 PF00384 Molybdopterin oxidoreductase GIY02_13240 PF01568 Molydopterin dinucleotide binding domain GIY02_13245 PF00583 Acetyltransferase (GNAT) family GIY02_13250 PF03352 Methyladenine glycosylase GIY02_13255 PF03797 Autotransporter beta-domain GIY02_13260 PF07690 Major Facilitator Superfamily GIY02_13265 PF00884 Sulfatase GIY02_13265 PF08019 Phosphoethanolamine transferase EptA/EptB GIY02_13280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_13285 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_13290 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_13290 PF12911 N-terminal TM domain of oligopeptide transport permease C GIY02_13295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_13295 PF00005 ABC transporter GIY02_13300 PF00005 ABC transporter GIY02_13300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_13305 PF13940 Toxin Ldr, type I toxin-antitoxin system GIY02_13310 PF13940 Toxin Ldr, type I toxin-antitoxin system GIY02_13315 PF11658 Cellulose biosynthesis protein BcsG GIY02_13320 PF11120 Cellulose biosynthesis protein BcsF GIY02_13325 PF10995 Cellulose biosynthesis GIL GIY02_13330 PF10945 Cellulose biosynthesis protein BcsR GIY02_13335 PF06564 Cellulose biosynthesis protein BcsQ GIY02_13340 PF07238 PilZ domain GIY02_13340 PF00535 Glycosyl transferase family 2 GIY02_13345 PF03170 Bacterial cellulose synthase subunit GIY02_13350 PF01270 Glycosyl hydrolases family 8 GIY02_13355 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) GIY02_13360 PF00672 HAMP domain GIY02_13360 PF00990 Diguanylate cyclase, GGDEF domain GIY02_13360 PF17154 Gammaproteobacterial periplasmic sensor domain GIY02_13360 PF00563 EAL domain GIY02_13365 PF00375 Sodium:dicarboxylate symporter family GIY02_13370 PF05193 Peptidase M16 inactive domain GIY02_13370 PF00675 Insulinase (Peptidase family M16) GIY02_13375 PF00294 pfkB family carbohydrate kinase GIY02_13380 PF05170 AsmA family GIY02_13385 PF00083 Sugar (and other) transporter GIY02_13385 PF07690 Major Facilitator Superfamily GIY02_13390 PF03631 Virulence factor BrkB GIY02_13395 PF03466 LysR substrate binding domain GIY02_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_13405 PF00196 Bacterial regulatory proteins, luxR family GIY02_13415 PF13302 Acetyltransferase (GNAT) domain GIY02_13420 PF01204 Trehalase GIY02_13425 PF00465 Iron-containing alcohol dehydrogenase GIY02_13430 PF00043 Glutathione S-transferase, C-terminal domain GIY02_13430 PF13417 Glutathione S-transferase, N-terminal domain GIY02_13435 PF00356 Bacterial regulatory proteins, lacI family GIY02_13450 PF00144 Beta-lactamase GIY02_13455 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_13455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GIY02_13460 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GIY02_13465 PF01432 Peptidase family M3 GIY02_13470 PF04445 Putative SAM-dependent methyltransferase GIY02_13475 PF00854 POT family GIY02_13480 PF00582 Universal stress protein family GIY02_13485 PF10625 Universal stress protein B (UspB) GIY02_13490 PF01384 Phosphate transporter family GIY02_13500 PF01769 Divalent cation transporter GIY02_13500 PF03448 MgtE intracellular N domain GIY02_13500 PF00571 CBS domain GIY02_13515 PF01402 Ribbon-helix-helix protein, copG family GIY02_13515 PF08753 NikR C terminal nickel binding domain GIY02_13520 PF00005 ABC transporter GIY02_13525 PF00005 ABC transporter GIY02_13530 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_13535 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_13540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_13545 PF03466 LysR substrate binding domain GIY02_13550 PF05870 Phenolic acid decarboxylase (PAD) GIY02_13555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GIY02_13560 PF00535 Glycosyl transferase family 2 GIY02_13565 PF00551 Formyl transferase GIY02_13565 PF01370 NAD dependent epimerase/dehydratase family GIY02_13565 PF02911 Formyl transferase, C-terminal domain GIY02_13570 PF01522 Polysaccharide deacetylase GIY02_13575 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GIY02_13580 PF00892 EamA-like transporter family GIY02_13590 PF01648 4'-phosphopantetheinyl transferase superfamily GIY02_13595 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_13595 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_13605 PF07977 FabA-like domain GIY02_13610 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_13610 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_13645 PF00668 Condensation domain GIY02_13645 PF00501 AMP-binding enzyme GIY02_13645 PF13193 AMP-binding enzyme C-terminal domain GIY02_13645 PF00975 Thioesterase domain GIY02_13645 PF00550 Phosphopantetheine attachment site GIY02_13655 PF00550 Phosphopantetheine attachment site GIY02_13675 PF07690 Major Facilitator Superfamily GIY02_13680 PF08786 DcrB GIY02_13685 PF02592 Putative vitamin uptake transporter GIY02_13690 PF01206 Sulfurtransferase TusA GIY02_13695 PF00403 Heavy-metal-associated domain GIY02_13700 PF07947 YhhN family GIY02_13705 PF10694 Protein of unknown function (DUF2500) GIY02_13710 PF06611 Protein of unknown function (DUF1145) GIY02_13720 PF00448 SRP54-type protein, GTPase domain GIY02_13720 PF02881 SRP54-type protein, helical bundle domain GIY02_13725 PF00005 ABC transporter GIY02_13730 PF02687 FtsX-like permease family GIY02_13730 PF18075 FtsX extracellular domain GIY02_13735 PF04545 Sigma-70, region 4 GIY02_13735 PF04542 Sigma-70 region 2 GIY02_13740 PF13458 Periplasmic binding protein GIY02_13745 PF12568 Acetyltransferase (GNAT) domain, PanZ GIY02_13755 PF13458 Periplasmic binding protein GIY02_13760 PF02653 Branched-chain amino acid transport system / permease component GIY02_13765 PF11862 Domain of unknown function (DUF3382) GIY02_13765 PF02653 Branched-chain amino acid transport system / permease component GIY02_13770 PF12399 Branched-chain amino acid ATP-binding cassette transporter GIY02_13770 PF00005 ABC transporter GIY02_13775 PF00005 ABC transporter GIY02_13780 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system GIY02_13790 PF13416 Bacterial extracellular solute-binding protein GIY02_13795 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_13800 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_13805 PF00005 ABC transporter GIY02_13805 PF17912 MalK OB fold domain GIY02_13810 PF03009 Glycerophosphoryl diester phosphodiesterase family GIY02_13815 PF10956 Protein of unknown function (DUF2756) GIY02_13825 PF00583 Acetyltransferase (GNAT) family GIY02_13835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GIY02_13835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GIY02_13840 PF17954 Quercetinase C-terminal cupin domain GIY02_13840 PF02678 Pirin GIY02_13845 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GIY02_13845 PF00356 Bacterial regulatory proteins, lacI family GIY02_13855 PF02447 GntP family permease GIY02_13860 PF02774 Semialdehyde dehydrogenase, dimerisation domain GIY02_13860 PF01118 Semialdehyde dehydrogenase, NAD binding domain GIY02_13865 PF02806 Alpha amylase, C-terminal all-beta domain GIY02_13865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GIY02_13865 PF00128 Alpha amylase, catalytic domain GIY02_13870 PF00128 Alpha amylase, catalytic domain GIY02_13870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GIY02_13870 PF18390 Glycogen debranching enzyme C-terminal domain GIY02_13875 PF00483 Nucleotidyl transferase GIY02_13880 PF08323 Starch synthase catalytic domain GIY02_13880 PF00534 Glycosyl transferases group 1 GIY02_13885 PF00343 Carbohydrate phosphorylase GIY02_13890 PF01266 FAD dependent oxidoreductase GIY02_13890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GIY02_13895 PF00581 Rhodanese-like domain GIY02_13900 PF01694 Rhomboid family GIY02_13900 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GIY02_13905 PF00455 DeoR C terminal sensor domain GIY02_13905 PF08220 DeoR-like helix-turn-helix domain GIY02_13910 PF17874 MalT-like TPR region GIY02_13910 PF00196 Bacterial regulatory proteins, luxR family GIY02_13915 PF00343 Carbohydrate phosphorylase GIY02_13920 PF02446 4-alpha-glucanotransferase GIY02_13925 PF02447 GntP family permease GIY02_13930 PF01521 Iron-sulphur cluster biosynthesis GIY02_13930 PF01106 NifU-like domain GIY02_13935 PF00156 Phosphoribosyl transferase domain GIY02_13940 PF00561 alpha/beta hydrolase fold GIY02_13950 PF09012 FeoC like transcriptional regulator GIY02_13955 PF17910 FeoB cytosolic helical domain GIY02_13955 PF07664 Ferrous iron transport protein B C terminus GIY02_13955 PF02421 Ferrous iron transport protein B GIY02_13955 PF07670 Nucleoside recognition GIY02_13960 PF04023 FeoA domain GIY02_13965 PF16921 Tex protein YqgF-like domain GIY02_13965 PF00575 S1 RNA binding domain GIY02_13965 PF17674 HHH domain GIY02_13965 PF09371 Tex-like protein N-terminal domain GIY02_13970 PF01272 Transcription elongation factor, GreA/GreB, C-term GIY02_13970 PF03449 Transcription elongation factor, N-terminal GIY02_13975 PF07729 FCD domain GIY02_13975 PF00392 Bacterial regulatory proteins, gntR family GIY02_13985 PF01557 Fumarylacetoacetate (FAA) hydrolase family GIY02_13990 PF13378 Enolase C-terminal domain-like GIY02_13990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GIY02_14005 PF05336 L-rhamnose mutarotase GIY02_14010 PF07690 Major Facilitator Superfamily GIY02_14015 PF00486 Transcriptional regulatory protein, C terminal GIY02_14015 PF00072 Response regulator receiver domain GIY02_14020 PF00672 HAMP domain GIY02_14020 PF00512 His Kinase A (phospho-acceptor) domain GIY02_14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_14025 PF01293 Phosphoenolpyruvate carboxykinase GIY02_14030 PF01430 Hsp33 protein GIY02_14035 PF01479 S4 domain GIY02_14040 PF13419 Haloacid dehalogenase-like hydrolase GIY02_14045 PF07095 Intracellular growth attenuator protein IgaA GIY02_14050 PF00293 NUDIX domain GIY02_14070 PF00912 Transglycosylase GIY02_14070 PF17092 Penicillin-binding protein OB-like domain GIY02_14070 PF00905 Penicillin binding protein transpeptidase domain GIY02_14095 PF03958 Bacterial type II/III secretion system short domain GIY02_14095 PF00263 Bacterial type II and III secretion system protein GIY02_14100 PF01202 Shikimate kinase GIY02_14105 PF01761 3-dehydroquinate synthase GIY02_14110 PF05036 Sporulation related domain GIY02_14115 PF02086 D12 class N6 adenine-specific DNA methyltransferase GIY02_14120 PF00834 Ribulose-phosphate 3 epimerase family GIY02_14125 PF13419 Haloacid dehalogenase-like hydrolase GIY02_14130 PF00579 tRNA synthetases class I (W and Y) GIY02_14135 PF10414 Sirohaem synthase dimerisation region GIY02_14135 PF14824 Sirohaem biosynthesis protein central GIY02_14135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GIY02_14140 PF13806 Rieske-like [2Fe-2S] domain GIY02_14145 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_14145 PF18267 Rubredoxin NAD+ reductase C-terminal domain GIY02_14145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GIY02_14145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GIY02_14145 PF04324 BFD-like [2Fe-2S] binding domain GIY02_14150 PF07969 Amidohydrolase family GIY02_14155 PF07690 Major Facilitator Superfamily GIY02_14160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GIY02_14165 PF10832 Protein of unknown function (DUF2559) GIY02_14170 PF02661 Fic/DOC family GIY02_14175 PF00117 Glutamine amidotransferase class-I GIY02_14180 PF00202 Aminotransferase class-III GIY02_14185 PF12805 FUSC-like inner membrane protein yccS GIY02_14190 PF13545 Crp-like helix-turn-helix domain GIY02_14190 PF00027 Cyclic nucleotide-binding domain GIY02_14195 PF02566 OsmC-like protein GIY02_14200 PF00485 Phosphoribulokinase / Uridine kinase family GIY02_14205 PF06794 Uncharacterised protein family (UPF0270) GIY02_14210 PF00561 alpha/beta hydrolase fold GIY02_14215 PF12848 ABC transporter GIY02_14215 PF00005 ABC transporter GIY02_14220 PF02525 Flavodoxin-like fold GIY02_14225 PF00999 Sodium/hydrogen exchanger family GIY02_14225 PF02254 TrkA-N domain GIY02_14230 PF09526 Probable metal-binding protein (DUF2387) GIY02_14235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GIY02_14240 PF04102 SlyX GIY02_14245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GIY02_14245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GIY02_14250 PF13309 HTH domain GIY02_14250 PF08348 YheO-like PAS domain GIY02_14255 PF02635 DsrE/DsrF-like family GIY02_14260 PF02635 DsrE/DsrF-like family GIY02_14265 PF04077 DsrH like protein GIY02_14270 PF00164 Ribosomal protein S12/S23 GIY02_14275 PF00177 Ribosomal protein S7p/S5e GIY02_14280 PF00679 Elongation factor G C-terminus GIY02_14280 PF00009 Elongation factor Tu GTP binding domain GIY02_14280 PF03144 Elongation factor Tu domain 2 GIY02_14280 PF03764 Elongation factor G, domain IV GIY02_14280 PF14492 Elongation Factor G, domain II GIY02_14285 PF00009 Elongation factor Tu GTP binding domain GIY02_14285 PF03144 Elongation factor Tu domain 2 GIY02_14285 PF03143 Elongation factor Tu C-terminal domain GIY02_14290 PF04324 BFD-like [2Fe-2S] binding domain GIY02_14295 PF00210 Ferritin-like domain GIY02_14300 PF01478 Type IV leader peptidase family GIY02_14305 PF00338 Ribosomal protein S10p/S20e GIY02_14310 PF00297 Ribosomal protein L3 GIY02_14315 PF00573 Ribosomal protein L4/L1 family GIY02_14320 PF00276 Ribosomal protein L23 GIY02_14325 PF03947 Ribosomal Proteins L2, C-terminal domain GIY02_14325 PF00181 Ribosomal Proteins L2, RNA binding domain GIY02_14330 PF00203 Ribosomal protein S19 GIY02_14335 PF00237 Ribosomal protein L22p/L17e GIY02_14340 PF00189 Ribosomal protein S3, C-terminal domain GIY02_14340 PF07650 KH domain GIY02_14345 PF00252 Ribosomal protein L16p/L10e GIY02_14350 PF00831 Ribosomal L29 protein GIY02_14355 PF00366 Ribosomal protein S17 GIY02_14360 PF00238 Ribosomal protein L14p/L23e GIY02_14365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GIY02_14365 PF00467 KOW motif GIY02_14370 PF00281 Ribosomal protein L5 GIY02_14370 PF00673 ribosomal L5P family C-terminus GIY02_14375 PF00253 Ribosomal protein S14p/S29e GIY02_14380 PF00410 Ribosomal protein S8 GIY02_14385 PF00347 Ribosomal protein L6 GIY02_14390 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GIY02_14395 PF03719 Ribosomal protein S5, C-terminal domain GIY02_14395 PF00333 Ribosomal protein S5, N-terminal domain GIY02_14400 PF00327 Ribosomal protein L30p/L7e GIY02_14405 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GIY02_14410 PF00344 SecY translocase GIY02_14415 PF00444 Ribosomal protein L36 GIY02_14420 PF00416 Ribosomal protein S13/S18 GIY02_14425 PF00411 Ribosomal protein S11 GIY02_14430 PF01479 S4 domain GIY02_14430 PF00163 Ribosomal protein S4/S9 N-terminal domain GIY02_14435 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GIY02_14435 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GIY02_14435 PF01000 RNA polymerase Rpb3/RpoA insert domain GIY02_14440 PF01196 Ribosomal protein L17 GIY02_14445 PF09350 Domain of unknown function (DUF1992) GIY02_14450 PF13411 MerR HTH family regulatory protein GIY02_14455 PF03889 Alternative ribosome-rescue factor A GIY02_14460 PF01741 Large-conductance mechanosensitive channel, MscL GIY02_14465 PF02254 TrkA-N domain GIY02_14465 PF02080 TrkA-C domain GIY02_14470 PF01189 16S rRNA methyltransferase RsmB/F GIY02_14470 PF01029 NusB family GIY02_14475 PF02911 Formyl transferase, C-terminal domain GIY02_14475 PF00551 Formyl transferase GIY02_14480 PF01327 Polypeptide deformylase GIY02_14485 PF02481 DNA recombination-mediator protein A GIY02_14485 PF17782 DprA winged helix domain GIY02_14490 PF04361 Protein of unknown function (DUF494) GIY02_14495 PF01396 Topoisomerase DNA binding C4 zinc finger GIY02_14500 PF01300 Telomere recombination GIY02_14505 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GIY02_14505 PF01488 Shikimate / quinate 5-dehydrogenase GIY02_14505 PF08501 Shikimate dehydrogenase substrate binding domain GIY02_14510 PF07369 Protein of unknown function (DUF1488) GIY02_14515 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_14550 PF00873 AcrB/AcrD/AcrF family GIY02_14555 PF00529 HlyD membrane-fusion protein of T1SS GIY02_14555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_14560 PF08361 MAATS-type transcriptional repressor, C-terminal region GIY02_14560 PF00440 Bacterial regulatory proteins, tetR family GIY02_14565 PF02954 Bacterial regulatory protein, Fis family GIY02_14570 PF01207 Dihydrouridine synthase (Dus) GIY02_14580 PF00474 Sodium:solute symporter family GIY02_14585 PF06196 Protein of unknown function (DUF997) GIY02_14590 PF00289 Biotin carboxylase, N-terminal domain GIY02_14590 PF02785 Biotin carboxylase C-terminal domain GIY02_14590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GIY02_14595 PF00364 Biotin-requiring enzyme GIY02_14600 PF01220 Dehydroquinase class II GIY02_14605 PF01794 Ferric reductase like transmembrane component GIY02_14610 PF00174 Oxidoreductase molybdopterin binding domain GIY02_14615 PF00107 Zinc-binding dehydrogenase GIY02_14615 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_14620 PF00563 EAL domain GIY02_14620 PF17157 Gammaproteobacterial periplasmic sensor domain GIY02_14620 PF00990 Diguanylate cyclase, GGDEF domain GIY02_14630 PF04085 rod shape-determining protein MreC GIY02_14635 PF04093 rod shape-determining protein MreD GIY02_14640 PF02545 Maf-like protein GIY02_14645 PF10150 Ribonuclease E/G family GIY02_14645 PF00575 S1 RNA binding domain GIY02_14650 PF13502 AsmA-like C-terminal region GIY02_14650 PF13116 Protein of unknown function GIY02_14655 PF01523 Putative modulator of DNA gyrase GIY02_14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_14660 PF03466 LysR substrate binding domain GIY02_14665 PF07869 Protein of unknown function (DUF1656) GIY02_14670 PF13533 Biotin-lipoyl like GIY02_14675 PF04632 Fusaric acid resistance protein family GIY02_14680 PF01337 Barstar (barnase inhibitor) GIY02_14685 PF07338 Protein of unknown function (DUF1471) GIY02_14690 PF07338 Protein of unknown function (DUF1471) GIY02_14695 PF02863 Arginine repressor, C-terminal domain GIY02_14695 PF01316 Arginine repressor, DNA binding domain GIY02_14700 PF00056 lactate/malate dehydrogenase, NAD binding domain GIY02_14700 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GIY02_14715 PF13180 PDZ domain GIY02_14720 PF13180 PDZ domain GIY02_14720 PF00595 PDZ domain GIY02_14725 PF06295 Protein of unknown function (DUF1043) GIY02_14730 PF03969 AFG1-like ATPase GIY02_14735 PF00572 Ribosomal protein L13 GIY02_14740 PF00380 Ribosomal protein S9/S16 GIY02_14745 PF02798 Glutathione S-transferase, N-terminal domain GIY02_14745 PF00043 Glutathione S-transferase, C-terminal domain GIY02_14750 PF04386 Stringent starvation protein B GIY02_14755 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_14755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GIY02_14760 PF01493 GXGXG motif GIY02_14760 PF00310 Glutamine amidotransferases class-II GIY02_14760 PF01645 Conserved region in glutamate synthase GIY02_14760 PF04898 Glutamate synthase central domain GIY02_14765 PF04055 Radical SAM superfamily GIY02_14765 PF16199 Radical_SAM C-terminal domain GIY02_14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_14770 PF00072 Response regulator receiver domain GIY02_14770 PF00512 His Kinase A (phospho-acceptor) domain GIY02_14770 PF18415 Histidine kinase receptor ArcB trans-membrane domain GIY02_14770 PF01627 Hpt domain GIY02_14770 PF00989 PAS fold GIY02_14780 PF00912 Transglycosylase GIY02_14785 PF00381 PTS HPr component phosphorylation site GIY02_14790 PF03668 P-loop ATPase protein family GIY02_14795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_14800 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GIY02_14805 PF04963 Sigma-54 factor, core binding domain GIY02_14805 PF04552 Sigma-54, DNA binding domain GIY02_14805 PF00309 Sigma-54 factor, Activator interacting domain (AID) GIY02_14810 PF12399 Branched-chain amino acid ATP-binding cassette transporter GIY02_14810 PF00005 ABC transporter GIY02_14815 PF03968 OstA-like protein GIY02_14820 PF06835 Lipopolysaccharide-assembly, LptC-related GIY02_14830 PF00571 CBS domain GIY02_14830 PF01380 SIS domain GIY02_14835 PF01699 Sodium/calcium exchanger protein GIY02_14840 PF00005 ABC transporter GIY02_14845 PF02405 Permease MlaE GIY02_14850 PF02470 MlaD protein GIY02_14855 PF05494 MlaC protein GIY02_14860 PF13466 STAS domain GIY02_14865 PF01722 BolA-like protein GIY02_14870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GIY02_14875 PF13693 Winged helix-turn-helix DNA-binding GIY02_14880 PF00348 Polyprenyl synthetase GIY02_14885 PF00829 Ribosomal prokaryotic L21 protein GIY02_14890 PF01016 Ribosomal L27 protein GIY02_14895 PF00892 EamA-like transporter family GIY02_14900 PF01018 GTP1/OBG GIY02_14900 PF01926 50S ribosome-binding GTPase GIY02_14905 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GIY02_14910 PF01272 Transcription elongation factor, GreA/GreB, C-term GIY02_14910 PF03449 Transcription elongation factor, N-terminal GIY02_14915 PF01985 CRS1 / YhbY (CRM) domain GIY02_14925 PF00583 Acetyltransferase (GNAT) family GIY02_14935 PF01728 FtsJ-like methyltransferase GIY02_14940 PF17862 AAA+ lid domain GIY02_14940 PF06480 FtsH Extracellular GIY02_14940 PF01434 Peptidase family M41 GIY02_14940 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_14950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GIY02_14950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GIY02_14950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GIY02_14950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GIY02_14955 PF03840 Preprotein translocase SecG subunit GIY02_14970 PF07437 YfaZ precursor GIY02_14975 PF15977 Winged helix-turn-helix DNA binding GIY02_14980 PF00764 Arginosuccinate synthase GIY02_14990 PF17384 RimP C-terminal SH3 domain GIY02_14990 PF02576 RimP N-terminal domain GIY02_14995 PF13184 NusA-like KH domain GIY02_14995 PF00575 S1 RNA binding domain GIY02_14995 PF08529 NusA N-terminal domain GIY02_15005 PF02033 Ribosome-binding factor A GIY02_15010 PF16198 tRNA pseudouridylate synthase B C-terminal domain GIY02_15010 PF09157 Pseudouridine synthase II TruB, C-terminal GIY02_15010 PF01509 TruB family pseudouridylate synthase (N terminal domain) GIY02_15015 PF00312 Ribosomal protein S15 GIY02_15020 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GIY02_15020 PF00575 S1 RNA binding domain GIY02_15020 PF03725 3' exoribonuclease family, domain 2 GIY02_15020 PF01138 3' exoribonuclease family, domain 1 GIY02_15020 PF00013 KH domain GIY02_15025 PF13181 Tetratricopeptide repeat GIY02_15025 PF07719 Tetratricopeptide repeat GIY02_15035 PF03880 DbpA RNA binding domain GIY02_15035 PF00270 DEAD/DEAH box helicase GIY02_15035 PF12343 Cold shock protein DEAD box A GIY02_15035 PF00271 Helicase conserved C-terminal domain GIY02_15040 PF03222 Tryptophan/tyrosine permease family GIY02_15045 PF00296 Luciferase-like monooxygenase GIY02_15065 PF13508 Acetyltransferase (GNAT) domain GIY02_15070 PF01541 GIY-YIG catalytic domain GIY02_15080 PF01965 DJ-1/PfpI family GIY02_15085 PF13460 NAD(P)H-binding GIY02_15090 PF03773 Predicted permease GIY02_15095 PF04972 BON domain GIY02_15100 PF13580 SIS domain GIY02_15105 PF02021 Uncharacterised protein family UPF0102 GIY02_15110 PF04348 LppC putative lipoprotein GIY02_15115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GIY02_15125 PF01116 Fructose-bisphosphate aldolase class-II GIY02_15130 PF01380 SIS domain GIY02_15135 PF01979 Amidohydrolase family GIY02_15140 PF03610 PTS system fructose IIA component GIY02_15145 PF03613 PTS system mannose/fructose/sorbose family IID component GIY02_15150 PF03609 PTS system sorbose-specific iic component GIY02_15155 PF03830 PTS system sorbose subfamily IIB component GIY02_15160 PF08013 Tagatose 6 phosphate kinase GIY02_15165 PF08220 DeoR-like helix-turn-helix domain GIY02_15165 PF00455 DeoR C terminal sensor domain GIY02_15170 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GIY02_15170 PF08666 SAF domain GIY02_15175 PF03328 HpcH/HpaI aldolase/citrate lyase family GIY02_15180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GIY02_15180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GIY02_15185 PF02595 Glycerate kinase family GIY02_15195 PF00924 Mechanosensitive ion channel GIY02_15195 PF05552 Conserved TM helix GIY02_15210 PF17954 Quercetinase C-terminal cupin domain GIY02_15210 PF02678 Pirin GIY02_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_15215 PF03466 LysR substrate binding domain GIY02_15220 PF05656 Protein of unknown function (DUF805) GIY02_15225 PF13409 Glutathione S-transferase, N-terminal domain GIY02_15230 PF07681 DoxX GIY02_15240 PF13997 YqjK-like protein GIY02_15245 PF07332 Putative Actinobacterial Holin-X, holin superfamily III GIY02_15250 PF05957 Bacterial protein of unknown function (DUF883) GIY02_15255 PF06476 Protein of unknown function (DUF1090) GIY02_15260 PF13721 SecD export protein N-terminal TM region GIY02_15265 PF09335 SNARE associated Golgi protein GIY02_15270 PF07729 FCD domain GIY02_15270 PF00392 Bacterial regulatory proteins, gntR family GIY02_15275 PF07690 Major Facilitator Superfamily GIY02_15280 PF02614 Glucuronate isomerase GIY02_15285 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GIY02_15285 PF08666 SAF domain GIY02_15290 PF00375 Sodium:dicarboxylate symporter family GIY02_15295 PF03741 Integral membrane protein TerC family GIY02_15300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GIY02_15305 PF01863 Protein of unknown function DUF45 GIY02_15310 PF05175 Methyltransferase small domain GIY02_15315 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_15315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GIY02_15320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_15320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GIY02_15325 PF04198 Putative sugar-binding domain GIY02_15330 PF00005 ABC transporter GIY02_15335 PF02653 Branched-chain amino acid transport system / permease component GIY02_15340 PF02653 Branched-chain amino acid transport system / permease component GIY02_15345 PF13407 Periplasmic binding protein domain GIY02_15350 PF01791 DeoC/LacD family aldolase GIY02_15355 PF03992 Antibiotic biosynthesis monooxygenase GIY02_15360 PF01204 Trehalase GIY02_15370 PF13520 Amino acid permease GIY02_15375 PF13520 Amino acid permease GIY02_15380 PF04074 YhcH/YjgK/YiaL GIY02_15385 PF00703 Glycosyl hydrolases family 2 GIY02_15385 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GIY02_15385 PF02929 Beta galactosidase small chain GIY02_15385 PF16353 Domain of unknown function(DUF4981) GIY02_15385 PF02837 Glycosyl hydrolases family 2, sugar binding domain GIY02_15390 PF00356 Bacterial regulatory proteins, lacI family GIY02_15395 PF01588 Putative tRNA binding domain GIY02_15400 PF00202 Aminotransferase class-III GIY02_15405 PF03551 Transcriptional regulator PadR-like family GIY02_15410 PF04954 Siderophore-interacting protein GIY02_15410 PF08021 Siderophore-interacting FAD-binding domain GIY02_15415 PF02734 DAK2 domain GIY02_15415 PF02733 Dak1 domain GIY02_15420 PF00381 PTS HPr component phosphorylation site GIY02_15420 PF00391 PEP-utilising enzyme, mobile domain GIY02_15420 PF05524 PEP-utilising enzyme, N-terminal GIY02_15420 PF03610 PTS system fructose IIA component GIY02_15425 PF02734 DAK2 domain GIY02_15430 PF02733 Dak1 domain GIY02_15435 PF00465 Iron-containing alcohol dehydrogenase GIY02_15440 PF02954 Bacterial regulatory protein, Fis family GIY02_15440 PF00989 PAS fold GIY02_15440 PF00158 Sigma-54 interaction domain GIY02_15460 PF00356 Bacterial regulatory proteins, lacI family GIY02_15475 PF07470 Glycosyl Hydrolase Family 88 GIY02_15480 PF04966 Carbohydrate-selective porin, OprB family GIY02_15485 PF07690 Major Facilitator Superfamily GIY02_15490 PF00356 Bacterial regulatory proteins, lacI family GIY02_15495 PF00701 Dihydrodipicolinate synthetase family GIY02_15500 PF03605 Anaerobic c4-dicarboxylate membrane transporter GIY02_15505 PF08986 Domain of unknown function (DUF1889) GIY02_15515 PF03167 Uracil DNA glycosylase superfamily GIY02_15520 PF00140 Sigma-70 factor, region 1.2 GIY02_15520 PF04545 Sigma-70, region 4 GIY02_15520 PF04546 Sigma-70, non-essential region GIY02_15520 PF04542 Sigma-70 region 2 GIY02_15520 PF03979 Sigma-70 factor, region 1.1 GIY02_15520 PF04539 Sigma-70 region 3 GIY02_15525 PF08275 DNA primase catalytic core, N-terminal domain GIY02_15525 PF01807 CHC2 zinc finger GIY02_15525 PF08278 DNA primase DnaG DnaB-binding GIY02_15525 PF10410 DnaB-helicase binding domain of primase GIY02_15530 PF01165 Ribosomal protein S21 GIY02_15535 PF00814 Glycoprotease family GIY02_15540 PF00083 Sugar (and other) transporter GIY02_15545 PF02660 Glycerol-3-phosphate acyltransferase GIY02_15550 PF02152 Dihydroneopterin aldolase GIY02_15555 PF02673 Bacitracin resistance protein BacA GIY02_15560 PF01966 HD domain GIY02_15560 PF01743 Poly A polymerase head domain GIY02_15560 PF12627 Probable RNA and SrmB- binding site of polymerase A GIY02_15565 PF08239 Bacterial SH3 domain GIY02_15570 PF01928 CYTH domain GIY02_15575 PF08335 GlnD PII-uridylyltransferase GIY02_15575 PF03710 Glutamate-ammonia ligase adenylyltransferase GIY02_15580 PF00294 pfkB family carbohydrate kinase GIY02_15580 PF01467 Cytidylyltransferase-like GIY02_15585 PF08971 Glycogen synthesis protein GIY02_15590 PF04380 Membrane fusogenic activity GIY02_15595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GIY02_15600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GIY02_15605 PF03738 Glutathionylspermidine synthase preATP-grasp GIY02_15610 PF06693 Protein of unknown function (DUF1190) GIY02_15615 PF02321 Outer membrane efflux protein GIY02_15620 PF00293 NUDIX domain GIY02_15625 PF06853 Protein of unknown function (DUF1249) GIY02_15630 PF00149 Calcineurin-like phosphoesterase GIY02_15635 PF05728 Uncharacterised protein family (UPF0227) GIY02_15645 PF03992 Antibiotic biosynthesis monooxygenase GIY02_15650 PF02525 Flavodoxin-like fold GIY02_15655 PF00512 His Kinase A (phospho-acceptor) domain GIY02_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_15655 PF08521 Two-component sensor kinase N-terminal GIY02_15660 PF00072 Response regulator receiver domain GIY02_15660 PF00486 Transcriptional regulatory protein, C terminal GIY02_15665 PF04076 Bacterial OB fold (BOF) protein GIY02_15670 PF06445 GyrI-like small molecule binding domain GIY02_15675 PF00521 DNA gyrase/topoisomerase IV, subunit A GIY02_15675 PF03989 DNA gyrase C-terminal domain, beta-propeller GIY02_15680 PF01553 Acyltransferase GIY02_15685 PF07731 Multicopper oxidase GIY02_15685 PF07732 Multicopper oxidase GIY02_15685 PF00394 Multicopper oxidase GIY02_15690 PF04055 Radical SAM superfamily GIY02_15690 PF11842 Domain of unknown function (DUF3362) GIY02_15690 PF08497 Radical SAM N-terminal GIY02_15700 PF00248 Aldo/keto reductase family GIY02_15705 PF00465 Iron-containing alcohol dehydrogenase GIY02_15710 PF06719 AraC-type transcriptional regulator N-terminus GIY02_15710 PF12833 Helix-turn-helix domain GIY02_15715 PF09335 SNARE associated Golgi protein GIY02_15720 PF01053 Cys/Met metabolism PLP-dependent enzyme GIY02_15725 PF01618 MotA/TolQ/ExbB proton channel family GIY02_15730 PF02472 Biopolymer transport protein ExbD/TolR GIY02_15735 PF03350 Uncharacterized protein family, UPF0114 GIY02_15740 PF02798 Glutathione S-transferase, N-terminal domain GIY02_15750 PF05257 CHAP domain GIY02_15750 PF03738 Glutathionylspermidine synthase preATP-grasp GIY02_15755 PF00155 Aminotransferase class I and II GIY02_15770 PF07729 FCD domain GIY02_15770 PF00392 Bacterial regulatory proteins, gntR family GIY02_15780 PF12697 Alpha/beta hydrolase family GIY02_15785 PF01613 Flavin reductase like domain GIY02_15790 PF00296 Luciferase-like monooxygenase GIY02_15795 PF00171 Aldehyde dehydrogenase family GIY02_15800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GIY02_15810 PF00202 Aminotransferase class-III GIY02_15815 PF00171 Aldehyde dehydrogenase family GIY02_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_15830 PF03466 LysR substrate binding domain GIY02_15835 PF01476 LysM domain GIY02_15835 PF04972 BON domain GIY02_15840 PF06078 Bacterial protein of unknown function (DUF937) GIY02_15845 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GIY02_15850 PF02311 AraC-like ligand binding domain GIY02_15850 PF12833 Helix-turn-helix domain GIY02_15860 PF01306 LacY proton/sugar symporter GIY02_15865 PF07470 Glycosyl Hydrolase Family 88 GIY02_15875 PF00593 TonB dependent receptor GIY02_15875 PF07715 TonB-dependent Receptor Plug Domain GIY02_15885 PF00756 Putative esterase GIY02_15885 PF11806 Domain of unknown function (DUF3327) GIY02_15890 PF00005 ABC transporter GIY02_15890 PF00664 ABC transporter transmembrane region GIY02_15895 PF06722 Protein of unknown function (DUF1205) GIY02_15905 PF07729 FCD domain GIY02_15905 PF00392 Bacterial regulatory proteins, gntR family GIY02_15910 PF00701 Dihydrodipicolinate synthetase family GIY02_15915 PF07690 Major Facilitator Superfamily GIY02_15920 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase GIY02_15925 PF00480 ROK family GIY02_15930 PF04074 YhcH/YjgK/YiaL GIY02_15935 PF05638 Type VI secretion system effector, Hcp GIY02_15950 PF04474 Protein of unknown function (DUF554) GIY02_15960 PF03825 Nucleoside H+ symporter GIY02_15965 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GIY02_15965 PF01464 Transglycosylase SLT domain GIY02_15970 PF04362 Bacterial Fe(2+) trafficking GIY02_15975 PF14815 NUDIX domain GIY02_15975 PF00730 HhH-GPD superfamily base excision DNA repair protein GIY02_15975 PF00633 Helix-hairpin-helix motif GIY02_15975 PF10576 Iron-sulfur binding domain of endonuclease III GIY02_15980 PF02390 Putative methyltransferase GIY02_15985 PF04320 Protein with unknown function (DUF469) GIY02_15990 PF11101 Protein of unknown function (DUF2884) GIY02_15995 PF02653 Branched-chain amino acid transport system / permease component GIY02_16000 PF00005 ABC transporter GIY02_16010 PF06969 HemN C-terminal domain GIY02_16010 PF04055 Radical SAM superfamily GIY02_16015 PF01725 Ham1 family GIY02_16020 PF02594 Uncharacterised ACR, YggU family COG1872 GIY02_16025 PF02325 YGGT family GIY02_16030 PF01168 Alanine racemase, N-terminal domain GIY02_16035 PF00437 Type II/IV secretion system protein GIY02_16040 PF00196 Bacterial regulatory proteins, luxR family GIY02_16045 PF03652 Holliday junction resolvase GIY02_16050 PF02622 Uncharacterized ACR, COG1678 GIY02_16055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GIY02_16055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GIY02_16060 PF04452 RNA methyltransferase GIY02_16065 PF04231 Endonuclease I GIY02_16070 PF17283 SprT-like zinc ribbon domain GIY02_16070 PF10263 SprT-like family GIY02_16075 PF00083 Sugar (and other) transporter GIY02_16080 PF00438 S-adenosylmethionine synthetase, N-terminal domain GIY02_16080 PF02773 S-adenosylmethionine synthetase, C-terminal domain GIY02_16080 PF02772 S-adenosylmethionine synthetase, central domain GIY02_16095 PF17810 Arginine decarboxylase helical bundle domain GIY02_16095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GIY02_16095 PF17944 Arginine decarboxylase C-terminal helical extension GIY02_16105 PF00491 Arginase family GIY02_16120 PF00355 Rieske [2Fe-2S] domain GIY02_16130 PF00355 Rieske [2Fe-2S] domain GIY02_16140 PF01614 Bacterial transcriptional regulator GIY02_16140 PF09339 IclR helix-turn-helix domain GIY02_16150 PF14759 Reductase C-terminal GIY02_16150 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_16165 PF12697 Alpha/beta hydrolase family GIY02_16175 PF03447 Homoserine dehydrogenase, NAD binding domain GIY02_16175 PF01958 Domain of unknown function DUF108 GIY02_16180 PF00171 Aldehyde dehydrogenase family GIY02_16185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_16185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_16185 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_16190 PF03573 outer membrane porin, OprD family GIY02_16195 PF01435 Peptidase family M48 GIY02_16200 PF00456 Transketolase, thiamine diphosphate binding domain GIY02_16200 PF02779 Transketolase, pyrimidine binding domain GIY02_16200 PF02780 Transketolase, C-terminal domain GIY02_16205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GIY02_16205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GIY02_16210 PF00162 Phosphoglycerate kinase GIY02_16215 PF01116 Fructose-bisphosphate aldolase class-II GIY02_16220 PF00924 Mechanosensitive ion channel GIY02_16220 PF05552 Conserved TM helix GIY02_16225 PF01810 LysE type translocator GIY02_16230 PF04402 Protein of unknown function (DUF541) GIY02_16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_16235 PF03466 LysR substrate binding domain GIY02_16240 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GIY02_16245 PF01842 ACT domain GIY02_16245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIY02_16245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GIY02_16250 PF01812 5-formyltetrahydrofolate cyclo-ligase family GIY02_16260 PF05164 Cell division protein ZapA GIY02_16265 PF03695 Uncharacterised protein family (UPF0149) GIY02_16270 PF00557 Metallopeptidase family M24 GIY02_16270 PF05195 Aminopeptidase P, N-terminal domain GIY02_16275 PF01494 FAD binding domain GIY02_16280 PF01494 FAD binding domain GIY02_16285 PF08669 Glycine cleavage T-protein C-terminal barrel domain GIY02_16285 PF01571 Aminomethyltransferase folate-binding domain GIY02_16290 PF01597 Glycine cleavage H-protein GIY02_16295 PF02347 Glycine cleavage system P-protein GIY02_16305 PF00578 AhpC/TSA family GIY02_16325 PF00232 Glycosyl hydrolase family 1 GIY02_16330 PF01418 Helix-turn-helix domain, rpiR family GIY02_16330 PF01380 SIS domain GIY02_16340 PF03006 Haemolysin-III related GIY02_16345 PF01571 Aminomethyltransferase folate-binding domain GIY02_16350 PF03937 Flavinator of succinate dehydrogenase GIY02_16355 PF07254 Membrane-bound toxin component of toxin-antitoxin system GIY02_16360 PF00258 Flavodoxin GIY02_16365 PF02899 Phage integrase, N-terminal SAM-like domain GIY02_16365 PF00589 Phage integrase family GIY02_16370 PF13098 Thioredoxin-like domain GIY02_16370 PF10411 Disulfide bond isomerase protein N-terminus GIY02_16375 PF02272 DHHA1 domain GIY02_16375 PF01368 DHH family GIY02_16375 PF17768 RecJ OB domain GIY02_16385 PF01336 OB-fold nucleic acid binding domain GIY02_16385 PF00152 tRNA synthetases class II (D, K and N) GIY02_16390 PF00293 NUDIX domain GIY02_16400 PF00583 Acetyltransferase (GNAT) family GIY02_16415 PF02441 Flavoprotein GIY02_16420 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GIY02_16435 PF00419 Fimbrial protein GIY02_16445 PF00577 Outer membrane usher protein GIY02_16445 PF13954 PapC N-terminal domain GIY02_16445 PF13953 PapC C-terminal domain GIY02_16450 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_16450 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_16460 PF00419 Fimbrial protein GIY02_16475 PF13393 Histidyl-tRNA synthetase GIY02_16475 PF03129 Anticodon binding domain GIY02_16480 PF13393 Histidyl-tRNA synthetase GIY02_16480 PF03129 Anticodon binding domain GIY02_16485 PF00282 Pyridoxal-dependent decarboxylase conserved domain GIY02_16490 PF13520 Amino acid permease GIY02_16500 PF00199 Catalase GIY02_16505 PF00356 Bacterial regulatory proteins, lacI family GIY02_16510 PF00459 Inositol monophosphatase family GIY02_16515 PF07690 Major Facilitator Superfamily GIY02_16520 PF00328 Histidine phosphatase superfamily (branch 2) GIY02_16545 PF02677 Epoxyqueuosine reductase QueH GIY02_16550 PF03824 High-affinity nickel-transport protein GIY02_16555 PF02583 Metal-sensitive transcriptional repressor GIY02_16560 PF13520 Amino acid permease GIY02_16565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GIY02_16565 PF01276 Orn/Lys/Arg decarboxylase, major domain GIY02_16565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GIY02_16575 PF00854 POT family GIY02_16580 PF02321 Outer membrane efflux protein GIY02_16585 PF04632 Fusaric acid resistance protein family GIY02_16590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_16590 PF00529 HlyD membrane-fusion protein of T1SS GIY02_16595 PF17090 Uncharacterised protein family GIY02_16600 PF06902 Divergent 4Fe-4S mono-cluster GIY02_16605 PF14542 GCN5-related N-acetyl-transferase GIY02_16615 PF09160 FimH, mannose binding GIY02_16615 PF00419 Fimbrial protein GIY02_16625 PF00419 Fimbrial protein GIY02_16630 PF13954 PapC N-terminal domain GIY02_16630 PF00577 Outer membrane usher protein GIY02_16630 PF13953 PapC C-terminal domain GIY02_16635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_16635 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_16640 PF00419 Fimbrial protein GIY02_16645 PF00419 Fimbrial protein GIY02_16655 PF00589 Phage integrase family GIY02_16660 PF00589 Phage integrase family GIY02_16675 PF13404 AsnC-type helix-turn-helix domain GIY02_16675 PF01037 Lrp/AsnC ligand binding domain GIY02_16685 PF00419 Fimbrial protein GIY02_16690 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_16690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_16695 PF00577 Outer membrane usher protein GIY02_16695 PF13954 PapC N-terminal domain GIY02_16695 PF13953 PapC C-terminal domain GIY02_16705 PF00083 Sugar (and other) transporter GIY02_16710 PF01613 Flavin reductase like domain GIY02_16715 PF00175 Oxidoreductase NAD-binding domain GIY02_16715 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_16730 PF00355 Rieske [2Fe-2S] domain GIY02_16730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GIY02_16740 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GIY02_16740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GIY02_16745 PF01425 Amidase GIY02_16755 PF01047 MarR family GIY02_16760 PF00892 EamA-like transporter family GIY02_16790 PF00248 Aldo/keto reductase family GIY02_16795 PF03222 Tryptophan/tyrosine permease family GIY02_16805 PF03466 LysR substrate binding domain GIY02_16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_16810 PF00108 Thiolase, N-terminal domain GIY02_16810 PF02803 Thiolase, C-terminal domain GIY02_16820 PF00083 Sugar (and other) transporter GIY02_16840 PF01306 LacY proton/sugar symporter GIY02_16845 PF08244 Glycosyl hydrolases family 32 C terminal GIY02_16845 PF00251 Glycosyl hydrolases family 32 N-terminal domain GIY02_16855 PF01177 Asp/Glu/Hydantoin racemase GIY02_16860 PF03466 LysR substrate binding domain GIY02_16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_16865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GIY02_16865 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GIY02_16870 PF00356 Bacterial regulatory proteins, lacI family GIY02_16880 PF00356 Bacterial regulatory proteins, lacI family GIY02_16885 PF01553 Acyltransferase GIY02_16885 PF00501 AMP-binding enzyme GIY02_16890 PF07690 Major Facilitator Superfamily GIY02_16895 PF00248 Aldo/keto reductase family GIY02_16900 PF06004 Bacterial protein of unknown function (DUF903) GIY02_16905 PF03741 Integral membrane protein TerC family GIY02_16910 PF02976 DNA mismatch repair enzyme MutH GIY02_16915 PF00293 NUDIX domain GIY02_16920 PF01590 GAF domain GIY02_16920 PF00391 PEP-utilising enzyme, mobile domain GIY02_16920 PF02896 PEP-utilising enzyme, TIM barrel domain GIY02_16920 PF05524 PEP-utilising enzyme, N-terminal GIY02_16925 PF01790 Prolipoprotein diacylglyceryl transferase GIY02_16930 PF00303 Thymidylate synthase GIY02_16935 PF07963 Prokaryotic N-terminal methylation motif GIY02_16940 PF07963 Prokaryotic N-terminal methylation motif GIY02_16945 PF10713 Protein of unknown function (DUF2509) GIY02_16955 PF17946 RecC C-terminal domain GIY02_16960 PF00675 Insulinase (Peptidase family M16) GIY02_16960 PF16187 Middle or third domain of peptidase_M16 GIY02_16960 PF05193 Peptidase M16 inactive domain GIY02_16965 PF00580 UvrD/REP helicase N-terminal domain GIY02_16965 PF13361 UvrD-like helicase C-terminal domain GIY02_16965 PF12705 PD-(D/E)XK nuclease superfamily GIY02_16970 PF13538 UvrD-like helicase C-terminal domain GIY02_16975 PF00583 Acetyltransferase (GNAT) family GIY02_16975 PF00696 Amino acid kinase family GIY02_16980 PF11741 AMIN domain GIY02_16980 PF01520 N-acetylmuramoyl-L-alanine amidase GIY02_17000 PF03562 MltA specific insert domain GIY02_17000 PF06725 3D domain GIY02_17005 PF00899 ThiF family GIY02_17010 PF02657 Fe-S metabolism associated domain GIY02_17015 PF00266 Aminotransferase class-V GIY02_17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_17020 PF03466 LysR substrate binding domain GIY02_17025 PF04241 Protein of unknown function (DUF423) GIY02_17030 PF01728 FtsJ-like methyltransferase GIY02_17030 PF18125 RlmM ferredoxin-like domain GIY02_17035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GIY02_17035 PF01367 5'-3' exonuclease, C-terminal SAM fold GIY02_17040 PF03315 Serine dehydratase beta chain GIY02_17040 PF03313 Serine dehydratase alpha chain GIY02_17050 PF11892 Domain of unknown function (DUF3412) GIY02_17050 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GIY02_17050 PF03641 Possible lysine decarboxylase GIY02_17055 PF14489 QueF-like protein GIY02_17055 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GIY02_17060 PF07348 Syd protein (SUKH-2) GIY02_17065 PF04287 tRNA pseudouridine synthase C GIY02_17070 PF00849 RNA pseudouridylate synthase GIY02_17075 PF00258 Flavodoxin GIY02_17085 PF07690 Major Facilitator Superfamily GIY02_17090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GIY02_17090 PF13378 Enolase C-terminal domain-like GIY02_17095 PF13378 Enolase C-terminal domain-like GIY02_17100 PF02595 Glycerate kinase family GIY02_17110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_17110 PF00072 Response regulator receiver domain GIY02_17110 PF00672 HAMP domain GIY02_17110 PF01627 Hpt domain GIY02_17110 PF00512 His Kinase A (phospho-acceptor) domain GIY02_17110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GIY02_17115 PF05958 tRNA (Uracil-5-)-methyltransferase GIY02_17115 PF01938 TRAM domain GIY02_17120 PF02824 TGS domain GIY02_17120 PF04607 Region found in RelA / SpoT proteins GIY02_17120 PF13291 ACT domain GIY02_17125 PF03819 MazG nucleotide pyrophosphohydrolase domain GIY02_17130 PF06418 CTP synthase N-terminus GIY02_17130 PF00117 Glutamine amidotransferase class-I GIY02_17135 PF03952 Enolase, N-terminal domain GIY02_17135 PF00113 Enolase, C-terminal TIM barrel domain GIY02_17145 PF04055 Radical SAM superfamily GIY02_17155 PF01242 6-pyruvoyl tetrahydropterin synthase GIY02_17160 PF00258 Flavodoxin GIY02_17160 PF00175 Oxidoreductase NAD-binding domain GIY02_17160 PF00667 FAD binding domain GIY02_17165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GIY02_17165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GIY02_17170 PF01507 Phosphoadenosine phosphosulfate reductase family GIY02_17175 PF04389 Peptidase family M28 GIY02_17180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GIY02_17180 PF10414 Sirohaem synthase dimerisation region GIY02_17180 PF14824 Sirohaem biosynthesis protein central GIY02_17185 PF01507 Phosphoadenosine phosphosulfate reductase family GIY02_17190 PF00009 Elongation factor Tu GTP binding domain GIY02_17200 PF12084 Protein of unknown function (DUF3561) GIY02_17205 PF04977 Septum formation initiator GIY02_17210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GIY02_17215 PF02542 YgbB family GIY02_17220 PF01142 tRNA pseudouridine synthase D (TruD) GIY02_17225 PF01975 Survival protein SurE GIY02_17235 PF01476 LysM domain GIY02_17235 PF01551 Peptidase family M23 GIY02_17240 PF04539 Sigma-70 region 3 GIY02_17240 PF00140 Sigma-70 factor, region 1.2 GIY02_17240 PF04542 Sigma-70 region 2 GIY02_17240 PF04545 Sigma-70, region 4 GIY02_17250 PF03466 LysR substrate binding domain GIY02_17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_17255 PF01047 MarR family GIY02_17260 PF02441 Flavoprotein GIY02_17265 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GIY02_17280 PF02753 Pili assembly chaperone PapD, C-terminal domain GIY02_17280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GIY02_17285 PF13953 PapC C-terminal domain GIY02_17285 PF00577 Outer membrane usher protein GIY02_17285 PF13954 PapC N-terminal domain GIY02_17305 PF05188 MutS domain II GIY02_17305 PF00488 MutS domain V GIY02_17305 PF05192 MutS domain III GIY02_17305 PF05190 MutS family domain IV GIY02_17305 PF01624 MutS domain I GIY02_17310 PF00005 ABC transporter GIY02_17315 PF01032 FecCD transport family GIY02_17320 PF01497 Periplasmic binding protein GIY02_17325 PF05171 Haemin-degrading HemS.ChuX domain GIY02_17330 PF00593 TonB dependent receptor GIY02_17330 PF07715 TonB-dependent Receptor Plug Domain GIY02_17340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_17340 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_17340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_17345 PF03547 Membrane transport protein GIY02_17350 PF03466 LysR substrate binding domain GIY02_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_17355 PF11756 Nitrous oxide-stimulated promoter GIY02_17360 PF00950 ABC 3 transport family GIY02_17365 PF00950 ABC 3 transport family GIY02_17370 PF00005 ABC transporter GIY02_17375 PF01297 Zinc-uptake complex component A periplasmic GIY02_17380 PF01590 GAF domain GIY02_17380 PF02954 Bacterial regulatory protein, Fis family GIY02_17380 PF00158 Sigma-54 interaction domain GIY02_17385 PF00586 AIR synthase related protein, N-terminal domain GIY02_17385 PF02769 AIR synthase related protein, C-terminal domain GIY02_17390 PF01924 Hydrogenase formation hypA family GIY02_17395 PF01455 HupF/HypC family GIY02_17400 PF02492 CobW/HypB/UreG, nucleotide-binding domain GIY02_17405 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GIY02_17410 PF11046 Transcriptional repressor of hyc and hyp operons GIY02_17415 PF13247 4Fe-4S dicluster domain GIY02_17420 PF00361 Proton-conducting membrane transporter GIY02_17425 PF00146 NADH dehydrogenase GIY02_17430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GIY02_17430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GIY02_17430 PF00374 Nickel-dependent hydrogenase GIY02_17435 PF12838 4Fe-4S dicluster domain GIY02_17440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GIY02_17445 PF07450 Formate hydrogenlyase maturation protein HycH GIY02_17450 PF01750 Hydrogenase maturation protease GIY02_17455 PF00232 Glycosyl hydrolase family 1 GIY02_17460 PF02378 Phosphotransferase system, EIIC GIY02_17460 PF00367 phosphotransferase system, EIIB GIY02_17465 PF00356 Bacterial regulatory proteins, lacI family GIY02_17470 PF13247 4Fe-4S dicluster domain GIY02_17470 PF12800 4Fe-4S binding domain GIY02_17475 PF01300 Telomere recombination GIY02_17475 PF00708 Acylphosphatase GIY02_17475 PF17788 HypF Kae1-like domain GIY02_17475 PF07503 HypF finger GIY02_17480 PF03824 High-affinity nickel-transport protein GIY02_17485 PF18113 Rubredoxin binding C-terminal domain GIY02_17485 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_17490 PF00753 Metallo-beta-lactamase superfamily GIY02_17490 PF00301 Rubredoxin GIY02_17490 PF00258 Flavodoxin GIY02_17495 PF01590 GAF domain GIY02_17495 PF00158 Sigma-54 interaction domain GIY02_17500 PF01380 SIS domain GIY02_17500 PF00571 CBS domain GIY02_17505 PF08220 DeoR-like helix-turn-helix domain GIY02_17505 PF00455 DeoR C terminal sensor domain GIY02_17510 PF06923 Glucitol operon activator protein (GutM) GIY02_17515 PF00106 short chain dehydrogenase GIY02_17520 PF03829 PTS system glucitol/sorbitol-specific IIA component GIY02_17525 PF03612 Sorbitol phosphotransferase enzyme II N-terminus GIY02_17525 PF07663 Sorbitol phosphotransferase enzyme II C-terminus GIY02_17530 PF03608 PTS system enzyme II sorbitol-specific factor GIY02_17535 PF13406 Transglycosylase SLT domain GIY02_17545 PF00005 ABC transporter GIY02_17550 PF00950 ABC 3 transport family GIY02_17555 PF01297 Zinc-uptake complex component A periplasmic GIY02_17560 PF02464 Competence-damaged protein GIY02_17565 PF00154 recA bacterial DNA recombination protein GIY02_17570 PF02631 RecX family GIY02_17575 PF02272 DHHA1 domain GIY02_17575 PF01411 tRNA synthetases class II (A) GIY02_17575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GIY02_17580 PF02599 Global regulator protein family GIY02_17610 PF04972 BON domain GIY02_17615 PF13419 Haloacid dehalogenase-like hydrolase GIY02_17620 PF09335 SNARE associated Golgi protein GIY02_17625 PF04262 Glutamate-cysteine ligase GIY02_17630 PF02664 S-Ribosylhomocysteinase (LuxS) GIY02_17635 PF12833 Helix-turn-helix domain GIY02_17635 PF12852 Cupin GIY02_17640 PF08502 LeuA allosteric (dimerisation) domain GIY02_17640 PF00682 HMGL-like GIY02_17645 PF07690 Major Facilitator Superfamily GIY02_17650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_17650 PF00529 HlyD membrane-fusion protein of T1SS GIY02_17655 PF01047 MarR family GIY02_17660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GIY02_17665 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_17670 PF00571 CBS domain GIY02_17670 PF00005 ABC transporter GIY02_17675 PF00268 Ribonucleotide reductase, small chain GIY02_17680 PF08343 Ribonucleotide reductase N-terminal GIY02_17680 PF00317 Ribonucleotide reductase, all-alpha domain GIY02_17680 PF02867 Ribonucleotide reductase, barrel domain GIY02_17685 PF07972 NrdI Flavodoxin like GIY02_17690 PF00462 Glutaredoxin GIY02_17695 PF02627 Carboxymuconolactone decarboxylase family GIY02_17700 PF00155 Aminotransferase class I and II GIY02_17700 PF00392 Bacterial regulatory proteins, gntR family GIY02_17705 PF05957 Bacterial protein of unknown function (DUF883) GIY02_17710 PF09400 Protein of unknown function (DUF2002) GIY02_17715 PF06610 L-alanine exporter GIY02_17720 PF00816 H-NS histone family GIY02_17735 PF11127 Protein of unknown function (DUF2892) GIY02_17735 PF00581 Rhodanese-like domain GIY02_17740 PF01022 Bacterial regulatory protein, arsR family GIY02_17745 PF02525 Flavodoxin-like fold GIY02_17750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_17750 PF03466 LysR substrate binding domain GIY02_17755 PF01569 PAP2 superfamily GIY02_17760 PF01590 GAF domain GIY02_17760 PF00158 Sigma-54 interaction domain GIY02_17760 PF02954 Bacterial regulatory protein, Fis family GIY02_17765 PF00171 Aldehyde dehydrogenase family GIY02_17770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_17770 PF00005 ABC transporter GIY02_17775 PF00005 ABC transporter GIY02_17775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_17780 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_17780 PF12911 N-terminal TM domain of oligopeptide transport permease C GIY02_17785 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_17790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_17795 PF01427 D-ala-D-ala dipeptidase GIY02_17805 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_17825 PF00106 short chain dehydrogenase GIY02_17830 PF10996 Beta-Casp domain GIY02_17830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GIY02_17830 PF00753 Metallo-beta-lactamase superfamily GIY02_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_17835 PF03466 LysR substrate binding domain GIY02_17840 PF07690 Major Facilitator Superfamily GIY02_17845 PF00005 ABC transporter GIY02_17850 PF03379 CcmB protein GIY02_17855 PF01578 Cytochrome C assembly protein GIY02_17860 PF04995 Heme exporter protein D (CcmD) GIY02_17865 PF03100 CcmE GIY02_17870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GIY02_17870 PF01578 Cytochrome C assembly protein GIY02_17875 PF08534 Redoxin GIY02_17880 PF03918 Cytochrome C biogenesis protein GIY02_17885 PF03918 Cytochrome C biogenesis protein GIY02_17890 PF03264 NapC/NirT cytochrome c family, N-terminal region GIY02_17895 PF01568 Molydopterin dinucleotide binding domain GIY02_17895 PF18364 Molybdopterin oxidoreductase N-terminal domain GIY02_17895 PF00384 Molybdopterin oxidoreductase GIY02_17905 PF06906 Protein of unknown function (DUF1272) GIY02_17915 PF02805 Metal binding domain of Ada GIY02_17915 PF12833 Helix-turn-helix domain GIY02_17925 PF01872 RibD C-terminal domain GIY02_17945 PF12705 PD-(D/E)XK nuclease superfamily GIY02_17945 PF00580 UvrD/REP helicase N-terminal domain GIY02_17945 PF13361 UvrD-like helicase C-terminal domain GIY02_17960 PF13356 Arm DNA-binding domain GIY02_17960 PF00589 Phage integrase family GIY02_17970 PF01668 SmpB protein GIY02_17975 PF03364 Polyketide cyclase / dehydrase and lipid transport GIY02_17980 PF03658 RnfH family Ubiquitin GIY02_17985 PF04355 SmpA / OmlA family GIY02_17990 PF02463 RecF/RecN/SMC N terminal domain GIY02_17995 PF01025 GrpE GIY02_18000 PF00571 CBS domain GIY02_18000 PF03471 Transporter associated domain GIY02_18000 PF01595 Cyclin M transmembrane N-terminal domain GIY02_18005 PF01578 Cytochrome C assembly protein GIY02_18010 PF00448 SRP54-type protein, GTPase domain GIY02_18010 PF02881 SRP54-type protein, helical bundle domain GIY02_18010 PF02978 Signal peptide binding domain GIY02_18015 PF00886 Ribosomal protein S16 GIY02_18020 PF01782 RimM N-terminal domain GIY02_18020 PF05239 PRC-barrel domain GIY02_18025 PF01746 tRNA (Guanine-1)-methyltransferase GIY02_18030 PF01245 Ribosomal protein L19 GIY02_18045 PF00691 OmpA family GIY02_18050 PF00990 Diguanylate cyclase, GGDEF domain GIY02_18050 PF17152 Periplasmic sensor domain GIY02_18055 PF13689 YfiR/HmsC-like GIY02_18060 PF00793 DAHP synthetase I family GIY02_18065 PF01817 Chorismate mutase type II GIY02_18065 PF02153 Prephenate dehydrogenase GIY02_18070 PF08450 SMP-30/Gluconolactonase/LRE-like region GIY02_18075 PF01817 Chorismate mutase type II GIY02_18075 PF00800 Prephenate dehydratase GIY02_18085 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GIY02_18090 PF13525 Outer membrane lipoprotein GIY02_18095 PF00849 RNA pseudouridylate synthase GIY02_18095 PF01479 S4 domain GIY02_18105 PF07724 AAA domain (Cdc48 subfamily) GIY02_18105 PF10431 C-terminal, D2-small domain, of ClpB protein GIY02_18105 PF02861 Clp amino terminal domain, pathogenicity island component GIY02_18105 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_18105 PF17871 AAA lid domain GIY02_18130 PF00083 Sugar (and other) transporter GIY02_18135 PF10043 Predicted periplasmic lipoprotein (DUF2279) GIY02_18140 PF13091 PLD-like domain GIY02_18145 PF13607 Succinyl-CoA ligase like flavodoxin domain GIY02_18145 PF13380 CoA binding domain GIY02_18145 PF00583 Acetyltransferase (GNAT) family GIY02_18155 PF00085 Thioredoxin GIY02_18160 PF00588 SpoU rRNA Methylase family GIY02_18160 PF08032 RNA 2'-O ribose methyltransferase substrate binding GIY02_18165 PF03167 Uracil DNA glycosylase superfamily GIY02_18170 PF01228 Glycine radical GIY02_18175 PF00271 Helicase conserved C-terminal domain GIY02_18175 PF00270 DEAD/DEAH box helicase GIY02_18185 PF00890 FAD binding domain GIY02_18185 PF02910 Fumarate reductase flavoprotein C-term GIY02_18195 PF04542 Sigma-70 region 2 GIY02_18195 PF08281 Sigma-70, region 4 GIY02_18200 PF03873 Anti sigma-E protein RseA, C-terminal domain GIY02_18200 PF03872 Anti sigma-E protein RseA, N-terminal domain GIY02_18205 PF17188 MucB/RseB C-terminal domain GIY02_18205 PF03888 MucB/RseB N-terminal domain GIY02_18215 PF00679 Elongation factor G C-terminus GIY02_18215 PF00009 Elongation factor Tu GTP binding domain GIY02_18215 PF03144 Elongation factor Tu domain 2 GIY02_18215 PF06421 GTP-binding protein LepA C-terminus GIY02_18220 PF10502 Signal peptidase, peptidase S26 GIY02_18225 PF00035 Double-stranded RNA binding motif GIY02_18225 PF14622 Ribonuclease-III-like GIY02_18230 PF01926 50S ribosome-binding GTPase GIY02_18230 PF07650 KH domain GIY02_18235 PF11967 Recombination protein O N terminal GIY02_18235 PF02565 Recombination protein O C terminal GIY02_18240 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GIY02_18245 PF01648 4'-phosphopantetheinyl transferase superfamily GIY02_18250 PF12838 4Fe-4S dicluster domain GIY02_18255 PF01380 SIS domain GIY02_18255 PF01418 Helix-turn-helix domain, rpiR family GIY02_18270 PF14437 MafB19-like deaminase GIY02_18275 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_18275 PF01464 Transglycosylase SLT domain GIY02_18280 PF02769 AIR synthase related protein, C-terminal domain GIY02_18280 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GIY02_18280 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GIY02_18285 PF00512 His Kinase A (phospho-acceptor) domain GIY02_18285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_18290 PF13942 YfhG lipoprotein GIY02_18295 PF00072 Response regulator receiver domain GIY02_18295 PF00158 Sigma-54 interaction domain GIY02_18300 PF00543 Nitrogen regulatory protein P-II GIY02_18305 PF00042 Globin GIY02_18305 PF00175 Oxidoreductase NAD-binding domain GIY02_18305 PF00970 Oxidoreductase FAD-binding domain GIY02_18310 PF00464 Serine hydroxymethyltransferase GIY02_18315 PF07681 DoxX GIY02_18320 PF12832 MFS_1 like family GIY02_18325 PF00874 PRD domain GIY02_18330 PF06226 Protein of unknown function (DUF1007) GIY02_18335 PF03824 High-affinity nickel-transport protein GIY02_18340 PF00459 Inositol monophosphatase family GIY02_18345 PF00588 SpoU rRNA Methylase family GIY02_18350 PF02082 Transcriptional regulator GIY02_18355 PF00266 Aminotransferase class-V GIY02_18360 PF01592 NifU-like N terminal domain GIY02_18365 PF01521 Iron-sulphur cluster biosynthesis GIY02_18370 PF07743 HSCB C-terminal oligomerisation domain GIY02_18370 PF00226 DnaJ domain GIY02_18375 PF00012 Hsp70 protein GIY02_18380 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_18385 PF04384 Iron-sulphur cluster assembly GIY02_18390 PF00883 Cytosol aminopeptidase family, catalytic domain GIY02_18390 PF12404 Peptidase GIY02_18395 PF07179 SseB protein N-terminal domain GIY02_18395 PF14581 SseB protein C-terminal domain GIY02_18400 PF00581 Rhodanese-like domain GIY02_18405 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain GIY02_18405 PF11974 Bacterial alpha-2-macroglobulin MG3 domain GIY02_18405 PF00207 Alpha-2-macroglobulin family GIY02_18405 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain GIY02_18405 PF07703 Alpha-2-macroglobulin bait region domain GIY02_18405 PF01835 MG2 domain GIY02_18405 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain GIY02_18405 PF07678 A-macroglobulin TED domain GIY02_18405 PF17962 Bacterial macroglobulin domain 6 GIY02_18410 PF06832 Penicillin-Binding Protein C-terminus Family GIY02_18410 PF00912 Transglycosylase GIY02_18410 PF00905 Penicillin binding protein transpeptidase domain GIY02_18415 PF00334 Nucleoside diphosphate kinase GIY02_18420 PF04055 Radical SAM superfamily GIY02_18425 PF13464 Domain of unknown function (DUF4115) GIY02_18430 PF04551 GcpE protein GIY02_18435 PF03129 Anticodon binding domain GIY02_18435 PF13393 Histidyl-tRNA synthetase GIY02_18440 PF09976 Tetratricopeptide repeat-like domain GIY02_18445 PF13360 PQQ-like domain GIY02_18450 PF01926 50S ribosome-binding GTPase GIY02_18450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GIY02_18455 PF07191 zinc-ribbons GIY02_18465 PF16485 Protealysin propeptide GIY02_18465 PF01447 Thermolysin metallopeptidase, catalytic domain GIY02_18465 PF02868 Thermolysin metallopeptidase, alpha-helical domain GIY02_18470 PF13742 OB-fold nucleic acid binding domain GIY02_18470 PF02601 Exonuclease VII, large subunit GIY02_18475 PF00571 CBS domain GIY02_18475 PF00478 IMP dehydrogenase / GMP reductase domain GIY02_18480 PF02540 NAD synthase GIY02_18480 PF00958 GMP synthase C terminal domain GIY02_18480 PF00117 Glutamine amidotransferase class-I GIY02_18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_18500 PF03466 LysR substrate binding domain GIY02_18505 PF11119 Protein of unknown function (DUF2633) GIY02_18510 PF05231 MASE1 GIY02_18510 PF00563 EAL domain GIY02_18515 PF02541 Ppx/GppA phosphatase family GIY02_18520 PF13090 Polyphosphate kinase C-terminal domain 2 GIY02_18520 PF17941 Polyphosphate kinase C-terminal domain 1 GIY02_18520 PF02503 Polyphosphate kinase middle domain GIY02_18520 PF13089 Polyphosphate kinase N-terminal domain GIY02_18530 PF07470 Glycosyl Hydrolase Family 88 GIY02_18545 PF00551 Formyl transferase GIY02_18550 PF02769 AIR synthase related protein, C-terminal domain GIY02_18550 PF00586 AIR synthase related protein, N-terminal domain GIY02_18560 PF00232 Glycosyl hydrolase family 1 GIY02_18570 PF00860 Permease family GIY02_18575 PF00308 Bacterial dnaA protein GIY02_18580 PF04754 Putative transposase, YhgA-like GIY02_18585 PF03960 ArsC family GIY02_18590 PF01435 Peptidase family M48 GIY02_18595 PF01594 AI-2E family transporter GIY02_18600 PF00578 AhpC/TSA family GIY02_18605 PF01842 ACT domain GIY02_18610 PF00701 Dihydrodipicolinate synthetase family GIY02_18615 PF06804 NlpB/DapX lipoprotein GIY02_18620 PF01259 SAICAR synthetase GIY02_18625 PF04228 Putative neutral zinc metallopeptidase GIY02_18630 PF05127 Helicase GIY02_18630 PF13718 GNAT acetyltransferase 2 GIY02_18630 PF17176 tRNA-binding domain GIY02_18630 PF08351 Domain of unknown function (DUF1726) GIY02_18635 PF02230 Phospholipase/Carboxylesterase GIY02_18640 PF13980 Uncharacterised protein family (UPF0370) GIY02_18645 PF01546 Peptidase family M20/M25/M40 GIY02_18645 PF07687 Peptidase dimerisation domain GIY02_18650 PF03960 ArsC family GIY02_18660 PF00873 AcrB/AcrD/AcrF family GIY02_18665 PF07992 Pyridine nucleotide-disulphide oxidoreductase GIY02_18665 PF13247 4Fe-4S dicluster domain GIY02_18665 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GIY02_18670 PF00293 NUDIX domain GIY02_18675 PF06674 Protein of unknown function (DUF1176) GIY02_18680 PF00456 Transketolase, thiamine diphosphate binding domain GIY02_18680 PF02779 Transketolase, pyrimidine binding domain GIY02_18680 PF02780 Transketolase, C-terminal domain GIY02_18685 PF00923 Transaldolase/Fructose-6-phosphate aldolase GIY02_18690 PF03949 Malic enzyme, NAD binding domain GIY02_18690 PF00390 Malic enzyme, N-terminal domain GIY02_18690 PF01515 Phosphate acetyl/butaryl transferase GIY02_18695 PF01218 Coproporphyrinogen III oxidase GIY02_18700 PF01520 N-acetylmuramoyl-L-alanine amidase GIY02_18705 PF00583 Acetyltransferase (GNAT) family GIY02_18710 PF11143 Protein of unknown function (DUF2919) GIY02_18715 PF06572 Protein of unknown function (DUF1131) GIY02_18720 PF04261 Dyp-type peroxidase family GIY02_18730 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_18735 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_18740 PF00005 ABC transporter GIY02_18745 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_18750 PF00117 Glutamine amidotransferase class-I GIY02_18755 PF00392 Bacterial regulatory proteins, gntR family GIY02_18755 PF00155 Aminotransferase class I and II GIY02_18760 PF08543 Phosphomethylpyrimidine kinase GIY02_18770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GIY02_18775 PF02896 PEP-utilising enzyme, TIM barrel domain GIY02_18775 PF00391 PEP-utilising enzyme, mobile domain GIY02_18775 PF05524 PEP-utilising enzyme, N-terminal GIY02_18780 PF00381 PTS HPr component phosphorylation site GIY02_18785 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_18795 PF04354 ZipA, C-terminal FtsZ-binding domain GIY02_18800 PF03120 NAD-dependent DNA ligase OB-fold domain GIY02_18800 PF01653 NAD-dependent DNA ligase adenylation domain GIY02_18800 PF00533 BRCA1 C Terminus (BRCT) domain GIY02_18800 PF12826 Helix-hairpin-helix motif GIY02_18800 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GIY02_18805 PF12843 Putative quorum-sensing-regulated virulence factor GIY02_18810 PF13593 SBF-like CPA transporter family (DUF4137) GIY02_18815 PF03466 LysR substrate binding domain GIY02_18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_18830 PF00583 Acetyltransferase (GNAT) family GIY02_18860 PF00749 tRNA synthetases class I (E and Q), catalytic domain GIY02_18865 PF07037 Putative transcription regulator (DUF1323) GIY02_18870 PF07037 Putative transcription regulator (DUF1323) GIY02_18885 PF05231 MASE1 GIY02_18885 PF00563 EAL domain GIY02_18890 PF01773 Na+ dependent nucleoside transporter N-terminus GIY02_18890 PF07662 Na+ dependent nucleoside transporter C-terminus GIY02_18890 PF07670 Nucleoside recognition GIY02_18895 PF01566 Natural resistance-associated macrophage protein GIY02_18900 PF10697 Protein of unknown function (DUF2502) GIY02_18905 PF00248 Aldo/keto reductase family GIY02_18910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_18910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_18910 PF00205 Thiamine pyrophosphate enzyme, central domain GIY02_18915 PF00654 Voltage gated chloride channel GIY02_18920 PF02685 Glucokinase GIY02_18925 PF04397 LytTr DNA-binding domain GIY02_18925 PF00072 Response regulator receiver domain GIY02_18930 PF07694 5TMR of 5TMR-LYT GIY02_18930 PF06580 Histidine kinase GIY02_18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_18935 PF00155 Aminotransferase class I and II GIY02_18945 PF07690 Major Facilitator Superfamily GIY02_18950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GIY02_18975 PF01226 Formate/nitrite transporter GIY02_18980 PF04333 MlaA lipoprotein GIY02_18985 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GIY02_18990 PF04175 Protein of unknown function (DUF406) GIY02_18995 PF00108 Thiolase, N-terminal domain GIY02_18995 PF02803 Thiolase, C-terminal domain GIY02_19005 PF00300 Histidine phosphatase superfamily (branch 1) GIY02_19010 PF01713 Smr domain GIY02_19015 PF05175 Methyltransferase small domain GIY02_19020 PF01264 Chorismate synthase GIY02_19025 PF03411 Penicillin-insensitive murein endopeptidase GIY02_19030 PF01925 Sulfite exporter TauE/SafE GIY02_19035 PF04315 Elongation factor P hydroxylase GIY02_19040 PF08891 YfcL protein GIY02_19045 PF01266 FAD dependent oxidoreductase GIY02_19045 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GIY02_19050 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_19050 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_19055 PF07690 Major Facilitator Superfamily GIY02_19060 PF07702 UTRA domain GIY02_19060 PF00392 Bacterial regulatory proteins, gntR family GIY02_19065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_19070 PF02378 Phosphotransferase system, EIIC GIY02_19075 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GIY02_19080 PF02264 LamB porin GIY02_19080 PF11471 Maltoporin periplasmic N-terminal extension GIY02_19095 PF11890 Domain of unknown function (DUF3410) GIY02_19095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIY02_19095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GIY02_19100 PF02774 Semialdehyde dehydrogenase, dimerisation domain GIY02_19100 PF01118 Semialdehyde dehydrogenase, NAD binding domain GIY02_19105 PF01416 tRNA pseudouridine synthase GIY02_19110 PF09335 SNARE associated Golgi protein GIY02_19115 PF01039 Carboxyl transferase domain GIY02_19115 PF17848 Acetyl-coA carboxylase zinc finger domain GIY02_19120 PF08245 Mur ligase middle domain GIY02_19120 PF02875 Mur ligase family, glutamate ligase domain GIY02_19125 PF05036 Sporulation related domain GIY02_19130 PF02674 Colicin V production protein GIY02_19135 PF00156 Phosphoribosyl transferase domain GIY02_19140 PF02441 Flavoprotein GIY02_19150 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_19155 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_19160 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_19165 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_19170 PF00005 ABC transporter GIY02_19190 PF01370 NAD dependent epimerase/dehydratase family GIY02_19190 PF08338 Domain of unknown function (DUF1731) GIY02_19195 PF02152 Dihydroneopterin aldolase GIY02_19200 PF02798 Glutathione S-transferase, N-terminal domain GIY02_19200 PF00043 Glutathione S-transferase, C-terminal domain GIY02_19205 PF02798 Glutathione S-transferase, N-terminal domain GIY02_19205 PF14834 Glutathione S-transferase, C-terminal domain GIY02_19210 PF12850 Calcineurin-like phosphoesterase superfamily domain GIY02_19215 PF00293 NUDIX domain GIY02_19220 PF01515 Phosphate acetyl/butaryl transferase GIY02_19220 PF07085 DRTGG domain GIY02_19225 PF00871 Acetokinase family GIY02_19230 PF04217 Protein of unknown function, DUF412 GIY02_19235 PF03887 YfbU domain GIY02_19240 PF13419 Haloacid dehalogenase-like hydrolase GIY02_19245 PF03600 Citrate transporter GIY02_19245 PF02080 TrkA-C domain GIY02_19255 PF00155 Aminotransferase class I and II GIY02_19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_19260 PF03466 LysR substrate binding domain GIY02_19265 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GIY02_19270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GIY02_19275 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GIY02_19275 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GIY02_19285 PF10531 SLBB domain GIY02_19285 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GIY02_19285 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GIY02_19290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GIY02_19290 PF00384 Molybdopterin oxidoreductase GIY02_19290 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GIY02_19290 PF01568 Molydopterin dinucleotide binding domain GIY02_19295 PF00146 NADH dehydrogenase GIY02_19300 PF12838 4Fe-4S dicluster domain GIY02_19305 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GIY02_19310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GIY02_19315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GIY02_19315 PF00361 Proton-conducting membrane transporter GIY02_19320 PF00361 Proton-conducting membrane transporter GIY02_19325 PF00361 Proton-conducting membrane transporter GIY02_19335 PF12706 Beta-lactamase superfamily domain GIY02_19340 PF13673 Acetyltransferase (GNAT) domain GIY02_19345 PF00425 chorismate binding enzyme GIY02_19350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GIY02_19350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GIY02_19350 PF16582 Middle domain of thiamine pyrophosphate GIY02_19355 PF12697 Alpha/beta hydrolase family GIY02_19360 PF00378 Enoyl-CoA hydratase/isomerase GIY02_19365 PF13378 Enolase C-terminal domain-like GIY02_19370 PF00501 AMP-binding enzyme GIY02_19370 PF13193 AMP-binding enzyme C-terminal domain GIY02_19375 PF01970 Tripartite tricarboxylate transporter TctA family GIY02_19390 PF00486 Transcriptional regulatory protein, C terminal GIY02_19390 PF00072 Response regulator receiver domain GIY02_19395 PF08521 Two-component sensor kinase N-terminal GIY02_19395 PF00512 His Kinase A (phospho-acceptor) domain GIY02_19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_19400 PF00293 NUDIX domain GIY02_19405 PF07437 YfaZ precursor GIY02_19410 PF00994 Probable molybdopterin binding domain GIY02_19415 PF13183 4Fe-4S dicluster domain GIY02_19415 PF02754 Cysteine-rich domain GIY02_19420 PF00890 FAD binding domain GIY02_19425 PF01266 FAD dependent oxidoreductase GIY02_19425 PF04324 BFD-like [2Fe-2S] binding domain GIY02_19430 PF07690 Major Facilitator Superfamily GIY02_19435 PF03009 Glycerophosphoryl diester phosphodiesterase family GIY02_19440 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_19445 PF00268 Ribonucleotide reductase, small chain GIY02_19450 PF00317 Ribonucleotide reductase, all-alpha domain GIY02_19450 PF02867 Ribonucleotide reductase, barrel domain GIY02_19450 PF03477 ATP cone domain GIY02_19460 PF00521 DNA gyrase/topoisomerase IV, subunit A GIY02_19460 PF03989 DNA gyrase C-terminal domain, beta-propeller GIY02_19465 PF09456 RcsC Alpha-Beta-Loop (ABL) GIY02_19465 PF00072 Response regulator receiver domain GIY02_19465 PF00512 His Kinase A (phospho-acceptor) domain GIY02_19465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_19470 PF00072 Response regulator receiver domain GIY02_19470 PF00196 Bacterial regulatory proteins, luxR family GIY02_19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_19475 PF01627 Hpt domain GIY02_19475 PF16359 RcsD-ABL domain GIY02_19490 PF02424 ApbE family GIY02_19495 PF02805 Metal binding domain of Ada GIY02_19495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GIY02_19495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GIY02_19495 PF12833 Helix-turn-helix domain GIY02_19500 PF13532 2OG-Fe(II) oxygenase superfamily GIY02_19505 PF00005 ABC transporter GIY02_19510 PF03448 MgtE intracellular N domain GIY02_19510 PF01769 Divalent cation transporter GIY02_19510 PF00571 CBS domain GIY02_19515 PF01740 STAS domain GIY02_19515 PF00916 Sulfate permease family GIY02_19520 PF06039 Malate:quinone oxidoreductase (Mqo) GIY02_19525 PF03974 Ecotin GIY02_19530 PF01594 AI-2E family transporter GIY02_19540 PF00884 Sulfatase GIY02_19540 PF11893 Domain of unknown function (DUF3413) GIY02_19545 PF07208 Protein of unknown function (DUF1414) GIY02_19550 PF04245 37-kD nucleoid-associated bacterial protein GIY02_19555 PF00455 DeoR C terminal sensor domain GIY02_19555 PF08220 DeoR-like helix-turn-helix domain GIY02_19560 PF00293 NUDIX domain GIY02_19565 PF00144 Beta-lactamase GIY02_19575 PF01386 Ribosomal L25p family GIY02_19580 PF00271 Helicase conserved C-terminal domain GIY02_19580 PF04851 Type III restriction enzyme, res subunit GIY02_19585 PF00849 RNA pseudouridylate synthase GIY02_19585 PF01479 S4 domain GIY02_19590 PF07690 Major Facilitator Superfamily GIY02_19595 PF13989 YejG-like protein GIY02_19600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_19600 PF00005 ABC transporter GIY02_19605 PF12911 N-terminal TM domain of oligopeptide transport permease C GIY02_19605 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_19610 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_19615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_19620 PF00563 EAL domain GIY02_19620 PF12792 CSS motif domain associated with EAL GIY02_19625 PF00877 NlpC/P60 family GIY02_19630 PF01569 PAP2 superfamily GIY02_19635 PF07683 Cobalamin synthesis protein cobW C-terminal domain GIY02_19635 PF02492 CobW/HypB/UreG, nucleotide-binding domain GIY02_19645 PF03786 D-mannonate dehydratase (UxuA) GIY02_19650 PF08207 Elongation factor P (EF-P) KOW-like domain GIY02_19650 PF09285 Elongation factor P, C-terminal GIY02_19650 PF01132 Elongation factor P (EF-P) OB domain GIY02_19655 PF03692 Putative zinc- or iron-chelating domain GIY02_19660 PF07690 Major Facilitator Superfamily GIY02_19670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_19670 PF00381 PTS HPr component phosphorylation site GIY02_19675 PF00294 pfkB family carbohydrate kinase GIY02_19680 PF02378 Phosphotransferase system, EIIC GIY02_19680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_19685 PF01261 Xylose isomerase-like TIM barrel GIY02_19690 PF03601 Conserved hypothetical protein 698 GIY02_19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_19695 PF03466 LysR substrate binding domain GIY02_19710 PF00324 Amino acid permease GIY02_19715 PF00593 TonB dependent receptor GIY02_19715 PF07715 TonB-dependent Receptor Plug Domain GIY02_19720 PF03960 ArsC family GIY02_19725 PF02040 Arsenical pump membrane protein GIY02_19730 PF01022 Bacterial regulatory protein, arsR family GIY02_19735 PF00756 Putative esterase GIY02_19740 PF01227 GTP cyclohydrolase I GIY02_19745 PF04235 Protein of unknown function (DUF418) GIY02_19750 PF00356 Bacterial regulatory proteins, lacI family GIY02_19755 PF13407 Periplasmic binding protein domain GIY02_19760 PF00005 ABC transporter GIY02_19765 PF02653 Branched-chain amino acid transport system / permease component GIY02_19770 PF02698 DUF218 domain GIY02_19775 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GIY02_19775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GIY02_19780 PF04172 LrgB-like family GIY02_19785 PF03788 LrgA family GIY02_19790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_19790 PF03466 LysR substrate binding domain GIY02_19795 PF07690 Major Facilitator Superfamily GIY02_19800 PF07883 Cupin domain GIY02_19805 PF01557 Fumarylacetoacetate (FAA) hydrolase family GIY02_19810 PF02798 Glutathione S-transferase, N-terminal domain GIY02_19810 PF14497 Glutathione S-transferase, C-terminal domain GIY02_19815 PF01494 FAD binding domain GIY02_19820 PF01207 Dihydrouridine synthase (Dus) GIY02_19825 PF00874 PRD domain GIY02_19825 PF03123 CAT RNA binding domain GIY02_19830 PF00367 phosphotransferase system, EIIB GIY02_19830 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GIY02_19830 PF02378 Phosphotransferase system, EIIC GIY02_19835 PF00232 Glycosyl hydrolase family 1 GIY02_19840 PF08241 Methyltransferase domain GIY02_19845 PF02321 Outer membrane efflux protein GIY02_19850 PF09335 SNARE associated Golgi protein GIY02_19855 PF04893 Yip1 domain GIY02_19860 PF00768 D-alanyl-D-alanine carboxypeptidase GIY02_19870 PF09330 D-lactate dehydrogenase, membrane binding GIY02_19870 PF01565 FAD binding domain GIY02_19875 PF14310 Fibronectin type III-like domain GIY02_19875 PF00933 Glycosyl hydrolase family 3 N terminal domain GIY02_19875 PF01915 Glycosyl hydrolase family 3 C-terminal domain GIY02_19880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GIY02_19885 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_19890 PF00005 ABC transporter GIY02_19895 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_19905 PF13411 MerR HTH family regulatory protein GIY02_19910 PF07694 5TMR of 5TMR-LYT GIY02_19910 PF06580 Histidine kinase GIY02_19915 PF00072 Response regulator receiver domain GIY02_19915 PF04397 LytTr DNA-binding domain GIY02_19920 PF07308 Protein of unknown function (DUF1456) GIY02_19925 PF06998 Protein of unknown function (DUF1307) GIY02_19935 PF01588 Putative tRNA binding domain GIY02_19935 PF09334 tRNA synthetases class I (M) GIY02_19940 PF10609 NUBPL iron-transfer P-loop NTPase GIY02_19950 PF11776 Nickel/cobalt transporter regulator GIY02_19955 PF03466 LysR substrate binding domain GIY02_19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_19960 PF00860 Permease family GIY02_19965 PF13382 Adenine deaminase C-terminal domain GIY02_19965 PF01979 Amidohydrolase family GIY02_19980 PF00753 Metallo-beta-lactamase superfamily GIY02_19980 PF14864 Alkyl sulfatase C-terminal GIY02_19980 PF14863 Alkyl sulfatase dimerisation GIY02_19990 PF00753 Metallo-beta-lactamase superfamily GIY02_19990 PF14864 Alkyl sulfatase C-terminal GIY02_19990 PF14863 Alkyl sulfatase dimerisation GIY02_20010 PF02110 Hydroxyethylthiazole kinase family GIY02_20015 PF08543 Phosphomethylpyrimidine kinase GIY02_20020 PF01791 DeoC/LacD family aldolase GIY02_20025 PF07690 Major Facilitator Superfamily GIY02_20030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_20030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GIY02_20040 PF00356 Bacterial regulatory proteins, lacI family GIY02_20045 PF00325 Bacterial regulatory proteins, crp family GIY02_20045 PF04198 Putative sugar-binding domain GIY02_20050 PF08125 Mannitol dehydrogenase C-terminal domain GIY02_20050 PF01232 Mannitol dehydrogenase Rossmann domain GIY02_20055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GIY02_20055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GIY02_20060 PF07690 Major Facilitator Superfamily GIY02_20065 PF00781 Diacylglycerol kinase catalytic domain GIY02_20075 PF00072 Response regulator receiver domain GIY02_20075 PF00486 Transcriptional regulatory protein, C terminal GIY02_20080 PF00672 HAMP domain GIY02_20080 PF00512 His Kinase A (phospho-acceptor) domain GIY02_20080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_20085 PF07690 Major Facilitator Superfamily GIY02_20090 PF00873 AcrB/AcrD/AcrF family GIY02_20095 PF00873 AcrB/AcrD/AcrF family GIY02_20100 PF13533 Biotin-lipoyl like GIY02_20110 PF00012 Hsp70 protein GIY02_20115 PF00730 HhH-GPD superfamily base excision DNA repair protein GIY02_20115 PF06029 AlkA N-terminal domain GIY02_20120 PF00485 Phosphoribulokinase / Uridine kinase family GIY02_20125 PF00692 dUTPase GIY02_20130 PF05170 AsmA family GIY02_20135 PF00571 CBS domain GIY02_20135 PF03471 Transporter associated domain GIY02_20135 PF03741 Integral membrane protein TerC family GIY02_20140 PF00483 Nucleotidyl transferase GIY02_20150 PF01569 PAP2 superfamily GIY02_20155 PF14052 Capsule assembly protein Wzi GIY02_20160 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GIY02_20160 PF02563 Polysaccharide biosynthesis/export protein GIY02_20160 PF10531 SLBB domain GIY02_20165 PF01451 Low molecular weight phosphotyrosine protein phosphatase GIY02_20170 PF02706 Chain length determinant protein GIY02_20170 PF13614 AAA domain GIY02_20170 PF13807 G-rich domain on putative tyrosine kinase GIY02_20175 PF02397 Bacterial sugar transferase GIY02_20180 PF00535 Glycosyl transferase family 2 GIY02_20185 PF00535 Glycosyl transferase family 2 GIY02_20195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GIY02_20195 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GIY02_20210 PF00535 Glycosyl transferase family 2 GIY02_20225 PF16363 GDP-mannose 4,6 dehydratase GIY02_20230 PF00483 Nucleotidyl transferase GIY02_20235 PF04321 RmlD substrate binding domain GIY02_20240 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GIY02_20245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GIY02_20245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GIY02_20245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIY02_20255 PF01370 NAD dependent epimerase/dehydratase family GIY02_20265 PF16363 GDP-mannose 4,6 dehydratase GIY02_20270 PF00483 Nucleotidyl transferase GIY02_20275 PF02350 UDP-N-acetylglucosamine 2-epimerase GIY02_20285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GIY02_20285 PF01502 Phosphoribosyl-AMP cyclohydrolase GIY02_20290 PF00977 Histidine biosynthesis protein GIY02_20295 PF00977 Histidine biosynthesis protein GIY02_20300 PF00117 Glutamine amidotransferase class-I GIY02_20305 PF00475 Imidazoleglycerol-phosphate dehydratase GIY02_20305 PF08645 Polynucleotide kinase 3 phosphatase GIY02_20310 PF00155 Aminotransferase class I and II GIY02_20315 PF00815 Histidinol dehydrogenase GIY02_20320 PF08029 HisG, C-terminal domain GIY02_20320 PF01634 ATP phosphoribosyltransferase GIY02_20330 PF01370 NAD dependent epimerase/dehydratase family GIY02_20335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_20335 PF03466 LysR substrate binding domain GIY02_20345 PF13520 Amino acid permease GIY02_20350 PF01022 Bacterial regulatory protein, arsR family GIY02_20355 PF03764 Elongation factor G, domain IV GIY02_20355 PF03144 Elongation factor Tu domain 2 GIY02_20355 PF00679 Elongation factor G C-terminus GIY02_20355 PF14492 Elongation Factor G, domain II GIY02_20355 PF00009 Elongation factor Tu GTP binding domain GIY02_20360 PF08411 Exonuclease C-terminal GIY02_20360 PF00929 Exonuclease GIY02_20365 PF01757 Acyltransferase family GIY02_20375 PF00768 D-alanyl-D-alanine carboxypeptidase GIY02_20375 PF07943 Penicillin-binding protein 5, C-terminal domain GIY02_20380 PF06445 GyrI-like small molecule binding domain GIY02_20385 PF04632 Fusaric acid resistance protein family GIY02_20390 PF04363 Protein of unknown function (DUF496) GIY02_20395 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GIY02_20400 PF02654 Cobalamin-5-phosphate synthase GIY02_20405 PF02277 Phosphoribosyltransferase GIY02_20410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GIY02_20410 PF05221 S-adenosyl-L-homocysteine hydrolase GIY02_20425 PF07690 Major Facilitator Superfamily GIY02_20425 PF00083 Sugar (and other) transporter GIY02_20435 PF03707 Bacterial signalling protein N terminal repeat GIY02_20435 PF00990 Diguanylate cyclase, GGDEF domain GIY02_20435 PF13188 PAS domain GIY02_20435 PF00563 EAL domain GIY02_20440 PF09313 Domain of unknown function (DUF1971) GIY02_20450 PF03466 LysR substrate binding domain GIY02_20450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_20470 PF01554 MatE GIY02_20510 PF01820 D-ala D-ala ligase N-terminus GIY02_20510 PF07478 D-ala D-ala ligase C-terminus GIY02_20515 PF07690 Major Facilitator Superfamily GIY02_20520 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus GIY02_20520 PF01048 Phosphorylase superfamily GIY02_20530 PF12146 Serine aminopeptidase, S33 GIY02_20540 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GIY02_20540 PF01648 4'-phosphopantetheinyl transferase superfamily GIY02_20550 PF03466 LysR substrate binding domain GIY02_20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_20555 PF03466 LysR substrate binding domain GIY02_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_20560 PF03734 L,D-transpeptidase catalytic domain GIY02_20560 PF17969 L,D-transpeptidase C-terminal domain GIY02_20580 PF01648 4'-phosphopantetheinyl transferase superfamily GIY02_20585 PF00072 Response regulator receiver domain GIY02_20585 PF00196 Bacterial regulatory proteins, luxR family GIY02_20590 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_20590 PF16197 Ketoacyl-synthetase C-terminal extension GIY02_20590 PF00668 Condensation domain GIY02_20590 PF00698 Acyl transferase domain GIY02_20590 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_20590 PF00550 Phosphopantetheine attachment site GIY02_20595 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_20595 PF00550 Phosphopantetheine attachment site GIY02_20595 PF16197 Ketoacyl-synthetase C-terminal extension GIY02_20595 PF00668 Condensation domain GIY02_20595 PF00698 Acyl transferase domain GIY02_20595 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_20600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIY02_20600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GIY02_20605 PF00550 Phosphopantetheine attachment site GIY02_20610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GIY02_20610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GIY02_20610 PF02770 Acyl-CoA dehydrogenase, middle domain GIY02_20615 PF00698 Acyl transferase domain GIY02_20620 PF00501 AMP-binding enzyme GIY02_20620 PF00550 Phosphopantetheine attachment site GIY02_20620 PF00668 Condensation domain GIY02_20620 PF13193 AMP-binding enzyme C-terminal domain GIY02_20625 PF00698 Acyl transferase domain GIY02_20625 PF00668 Condensation domain GIY02_20625 PF00550 Phosphopantetheine attachment site GIY02_20625 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_20625 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_20625 PF16197 Ketoacyl-synthetase C-terminal extension GIY02_20630 PF00501 AMP-binding enzyme GIY02_20630 PF00668 Condensation domain GIY02_20630 PF13193 AMP-binding enzyme C-terminal domain GIY02_20630 PF00550 Phosphopantetheine attachment site GIY02_20635 PF00668 Condensation domain GIY02_20635 PF00501 AMP-binding enzyme GIY02_20635 PF13193 AMP-binding enzyme C-terminal domain GIY02_20635 PF00550 Phosphopantetheine attachment site GIY02_20635 PF00550 Phosphopantetheine attachment site GIY02_20635 PF00668 Condensation domain GIY02_20635 PF00501 AMP-binding enzyme GIY02_20635 PF13193 AMP-binding enzyme C-terminal domain GIY02_20640 PF01425 Amidase GIY02_20650 PF13193 AMP-binding enzyme C-terminal domain GIY02_20650 PF00501 AMP-binding enzyme GIY02_20650 PF00668 Condensation domain GIY02_20650 PF00550 Phosphopantetheine attachment site GIY02_20655 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_20655 PF00698 Acyl transferase domain GIY02_20655 PF00550 Phosphopantetheine attachment site GIY02_20655 PF00668 Condensation domain GIY02_20655 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_20655 PF16197 Ketoacyl-synthetase C-terminal extension GIY02_20660 PF00144 Beta-lactamase GIY02_20665 PF00975 Thioesterase domain GIY02_20700 PF00437 Type II/IV secretion system protein GIY02_20710 PF03743 Bacterial conjugation TrbI-like protein GIY02_20715 PF03524 Conjugal transfer protein GIY02_20740 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GIY02_20745 PF04956 TrbC/VIRB2 family GIY02_20795 PF00593 TonB dependent receptor GIY02_20795 PF07715 TonB-dependent Receptor Plug Domain GIY02_20800 PF13193 AMP-binding enzyme C-terminal domain GIY02_20800 PF00501 AMP-binding enzyme GIY02_20805 PF00975 Thioesterase domain GIY02_20815 PF00668 Condensation domain GIY02_20815 PF16197 Ketoacyl-synthetase C-terminal extension GIY02_20815 PF00698 Acyl transferase domain GIY02_20815 PF00550 Phosphopantetheine attachment site GIY02_20815 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_20815 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_20820 PF00668 Condensation domain GIY02_20820 PF00550 Phosphopantetheine attachment site GIY02_20820 PF08242 Methyltransferase domain GIY02_20820 PF00501 AMP-binding enzyme GIY02_20830 PF04954 Siderophore-interacting protein GIY02_20830 PF00005 ABC transporter GIY02_20830 PF00664 ABC transporter transmembrane region GIY02_20830 PF08021 Siderophore-interacting FAD-binding domain GIY02_20835 PF00664 ABC transporter transmembrane region GIY02_20835 PF00005 ABC transporter GIY02_20840 PF07690 Major Facilitator Superfamily GIY02_20845 PF00425 chorismate binding enzyme GIY02_20850 PF13356 Arm DNA-binding domain GIY02_20850 PF00589 Phage integrase family GIY02_20865 PF01032 FecCD transport family GIY02_20870 PF01475 Ferric uptake regulator family GIY02_20880 PF07683 Cobalamin synthesis protein cobW C-terminal domain GIY02_20880 PF02492 CobW/HypB/UreG, nucleotide-binding domain GIY02_20895 PF09190 DALR domain GIY02_20895 PF01406 tRNA synthetases class I (C) catalytic domain GIY02_20910 PF01258 Prokaryotic dksA/traR C4-type zinc finger GIY02_20915 PF02649 Type I GTP cyclohydrolase folE2 GIY02_20920 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_20935 PF00950 ABC 3 transport family GIY02_20940 PF00950 ABC 3 transport family GIY02_20945 PF00005 ABC transporter GIY02_20950 PF01297 Zinc-uptake complex component A periplasmic GIY02_20955 PF03129 Anticodon binding domain GIY02_20955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GIY02_20955 PF02824 TGS domain GIY02_20955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GIY02_20965 PF01979 Amidohydrolase family GIY02_20970 PF00490 Delta-aminolevulinic acid dehydratase GIY02_20980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GIY02_20980 PF01266 FAD dependent oxidoreductase GIY02_20995 PF01297 Zinc-uptake complex component A periplasmic GIY02_21000 PF00950 ABC 3 transport family GIY02_21005 PF00005 ABC transporter GIY02_21015 PF00589 Phage integrase family GIY02_21015 PF13356 Arm DNA-binding domain GIY02_21025 PF06167 Glucose-regulated metallo-peptidase M90 GIY02_21040 PF02350 UDP-N-acetylglucosamine 2-epimerase GIY02_21055 PF00005 ABC transporter GIY02_21060 PF01061 ABC-2 type transporter GIY02_21070 PF00267 Gram-negative porin GIY02_21080 PF01966 HD domain GIY02_21085 PF18284 DNA methylase N-terminal domain GIY02_21085 PF00145 C-5 cytosine-specific DNA methylase GIY02_21090 PF03852 DNA mismatch endonuclease Vsr GIY02_21095 PF00892 EamA-like transporter family GIY02_21100 PF05661 Protein of unknown function (DUF808) GIY02_21105 PF09926 Uncharacterized small protein (DUF2158) GIY02_21110 PF17151 Periplasmic sensor domain GIY02_21110 PF00990 Diguanylate cyclase, GGDEF domain GIY02_21115 PF10733 Protein of unknown function (DUF2525) GIY02_21120 PF10781 Dextransucrase DSRB GIY02_21125 PF00196 Bacterial regulatory proteins, luxR family GIY02_21130 PF13987 YedD-like protein GIY02_21135 PF02806 Alpha amylase, C-terminal all-beta domain GIY02_21135 PF00128 Alpha amylase, catalytic domain GIY02_21145 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_21160 PF02515 CoA-transferase family III GIY02_21165 PF03472 Autoinducer binding domain GIY02_21165 PF00196 Bacterial regulatory proteins, luxR family GIY02_21170 PF10769 Protein of unknown function (DUF2594) GIY02_21175 PF00196 Bacterial regulatory proteins, luxR family GIY02_21175 PF00072 Response regulator receiver domain GIY02_21180 PF01541 GIY-YIG catalytic domain GIY02_21180 PF08459 UvrC Helix-hairpin-helix N-terminal GIY02_21180 PF02151 UvrB/uvrC motif GIY02_21185 PF01066 CDP-alcohol phosphatidyltransferase GIY02_21205 PF00701 Dihydrodipicolinate synthetase family GIY02_21210 PF05656 Protein of unknown function (DUF805) GIY02_21215 PF03695 Uncharacterised protein family (UPF0149) GIY02_21215 PF02810 SEC-C motif GIY02_21220 PF03222 Tryptophan/tyrosine permease family GIY02_21225 PF10678 Protein of unknown function (DUF2492) GIY02_21230 PF00210 Ferritin-like domain GIY02_21240 PF07690 Major Facilitator Superfamily GIY02_21245 PF10964 Protein of unknown function (DUF2766) GIY02_21250 PF00210 Ferritin-like domain GIY02_21255 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GIY02_21260 PF00005 ABC transporter GIY02_21265 PF02653 Branched-chain amino acid transport system / permease component GIY02_21270 PF02358 Trehalose-phosphatase GIY02_21275 PF00982 Glycosyltransferase family 20 GIY02_21280 PF00582 Universal stress protein family GIY02_21295 PF07470 Glycosyl Hydrolase Family 88 GIY02_21300 PF00750 tRNA synthetases class I (R) GIY02_21300 PF03485 Arginyl tRNA synthetase N terminal domain GIY02_21300 PF05746 DALR anticodon binding domain GIY02_21305 PF06185 YecM protein GIY02_21310 PF03932 CutC family GIY02_21315 PF08003 Protein of unknown function (DUF1698) GIY02_21320 PF13649 Methyltransferase domain GIY02_21325 PF01124 MAPEG family GIY02_21330 PF01904 Protein of unknown function DUF72 GIY02_21335 PF00857 Isochorismatase family GIY02_21340 PF01336 OB-fold nucleic acid binding domain GIY02_21340 PF00152 tRNA synthetases class II (D, K and N) GIY02_21340 PF02938 GAD domain GIY02_21345 PF00293 NUDIX domain GIY02_21350 PF01709 Transcriptional regulator GIY02_21355 PF02075 Crossover junction endodeoxyribonuclease RuvC GIY02_21360 PF07499 RuvA, C-terminal domain GIY02_21360 PF01330 RuvA N terminal domain GIY02_21365 PF17864 RuvB AAA lid domain GIY02_21365 PF05496 Holliday junction DNA helicase RuvB P-loop domain GIY02_21365 PF05491 RuvB C-terminal winged helix domain GIY02_21370 PF00950 ABC 3 transport family GIY02_21375 PF00005 ABC transporter GIY02_21380 PF01297 Zinc-uptake complex component A periplasmic GIY02_21385 PF08525 Opacity-associated protein A N-terminal motif GIY02_21385 PF01476 LysM domain GIY02_21385 PF01551 Peptidase family M23 GIY02_21390 PF03279 Bacterial lipid A biosynthesis acyltransferase GIY02_21395 PF02887 Pyruvate kinase, alpha/beta domain GIY02_21395 PF00224 Pyruvate kinase, barrel domain GIY02_21400 PF01418 Helix-turn-helix domain, rpiR family GIY02_21400 PF01380 SIS domain GIY02_21405 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GIY02_21405 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GIY02_21410 PF00920 Dehydratase family GIY02_21415 PF01081 KDPG and KHG aldolase GIY02_21420 PF02222 ATP-grasp domain GIY02_21425 PF07130 YebG protein GIY02_21430 PF04391 Protein of unknown function (DUF533) GIY02_21435 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GIY02_21435 PF00326 Prolyl oligopeptidase family GIY02_21440 PF00929 Exonuclease GIY02_21445 PF06440 DNA polymerase III, theta subunit GIY02_21450 PF04234 CopC domain GIY02_21455 PF05425 Copper resistance protein D GIY02_21460 PF10709 Protein of unknown function (DUF2511) GIY02_21505 PF01381 Helix-turn-helix GIY02_21530 PF01695 IstB-like ATP binding protein GIY02_21555 PF00149 Calcineurin-like phosphoesterase GIY02_21560 PF07358 Protein of unknown function (DUF1482) GIY02_21565 PF07351 Protein of unknown function (DUF1480) GIY02_21570 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GIY02_21570 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GIY02_21570 PF01189 16S rRNA methyltransferase RsmB/F GIY02_21575 PF02470 MlaD protein GIY02_21580 PF04403 Paraquat-inducible protein A GIY02_21585 PF13185 GAF domain GIY02_21590 PF17516 ProQ C-terminal domain GIY02_21590 PF04352 ProQ/FINO family GIY02_21595 PF11818 C-terminal domain of tail specific protease (DUF3340) GIY02_21595 PF00595 PDZ domain GIY02_21595 PF03572 Peptidase family S41 GIY02_21595 PF17804 Tail specific protease N-terminal domain GIY02_21600 PF01435 Peptidase family M48 GIY02_21605 PF07690 Major Facilitator Superfamily GIY02_21610 PF09339 IclR helix-turn-helix domain GIY02_21610 PF01614 Bacterial transcriptional regulator GIY02_21615 PF13996 YobH-like protein GIY02_21620 PF13998 MgrB protein GIY02_21625 PF13974 YebO-like protein GIY02_21630 PF10736 Protein of unknown function (DUF2627) GIY02_21635 PF00313 'Cold-shock' DNA-binding domain GIY02_21640 PF00905 Penicillin binding protein transpeptidase domain GIY02_21640 PF03717 Penicillin-binding Protein dimerisation domain GIY02_21645 PF13847 Methyltransferase domain GIY02_21650 PF02659 Putative manganese efflux pump GIY02_21655 PF06173 Protein of unknown function (DUF986) GIY02_21660 PF03613 PTS system mannose/fructose/sorbose family IID component GIY02_21665 PF03609 PTS system sorbose-specific iic component GIY02_21670 PF03830 PTS system sorbose subfamily IIB component GIY02_21670 PF03610 PTS system fructose IIA component GIY02_21675 PF03741 Integral membrane protein TerC family GIY02_21675 PF03471 Transporter associated domain GIY02_21680 PF12792 CSS motif domain associated with EAL GIY02_21680 PF00563 EAL domain GIY02_21685 PF03315 Serine dehydratase beta chain GIY02_21685 PF03313 Serine dehydratase alpha chain GIY02_21690 PF00293 NUDIX domain GIY02_21695 PF00425 chorismate binding enzyme GIY02_21695 PF04715 Anthranilate synthase component I, N terminal region GIY02_21700 PF03701 Uncharacterised protein family (UPF0181) GIY02_21705 PF01042 Endoribonuclease L-PSP GIY02_21710 PF04851 Type III restriction enzyme, res subunit GIY02_21710 PF13307 Helicase C-terminal domain GIY02_21715 PF00814 Glycoprotease family GIY02_21720 PF03843 Outer membrane lipoprotein Slp family GIY02_21725 PF13193 AMP-binding enzyme C-terminal domain GIY02_21725 PF00501 AMP-binding enzyme GIY02_21730 PF01612 3'-5' exonuclease GIY02_21730 PF00570 HRDC domain GIY02_21735 PF03776 Septum formation topological specificity factor MinE GIY02_21740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GIY02_21745 PF03775 Septum formation inhibitor MinC, C-terminal domain GIY02_21745 PF05209 Septum formation inhibitor MinC, N-terminal domain GIY02_21750 PF05166 YcgL domain GIY02_21755 PF01557 Fumarylacetoacetate (FAA) hydrolase family GIY02_21760 PF03692 Putative zinc- or iron-chelating domain GIY02_21765 PF12167 Arm DNA-binding domain GIY02_21765 PF00589 Phage integrase family GIY02_21785 PF00145 C-5 cytosine-specific DNA methylase GIY02_21805 PF00929 Exonuclease GIY02_21830 PF00717 Peptidase S24-like GIY02_21830 PF01381 Helix-turn-helix GIY02_21850 PF06992 Replication protein P GIY02_21880 PF06958 S-type Pyocin GIY02_21885 PF01320 Colicin immunity protein / pyocin immunity protein GIY02_21895 PF05772 NinB protein GIY02_21900 PF05866 Endodeoxyribonuclease RusA GIY02_21940 PF03245 Bacteriophage Rz lysis protein GIY02_21950 PF00583 Acetyltransferase (GNAT) family GIY02_21990 PF10668 Phage terminase small subunit GIY02_21990 PF03592 Terminase small subunit GIY02_22125 PF11799 impB/mucB/samB family C-terminal domain GIY02_22125 PF00817 impB/mucB/samB family GIY02_22125 PF11798 IMS family HHH motif GIY02_22125 PF13438 Domain of unknown function (DUF4113) GIY02_22135 PF02586 SOS response associated peptidase (SRAP) GIY02_22145 PF02600 Disulfide bond formation protein DsbB GIY02_22150 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GIY02_22155 PF00392 Bacterial regulatory proteins, gntR family GIY02_22155 PF07840 FadR C-terminal domain GIY02_22160 PF04293 SpoVR like protein GIY02_22165 PF01266 FAD dependent oxidoreductase GIY02_22170 PF01168 Alanine racemase, N-terminal domain GIY02_22170 PF00842 Alanine racemase, C-terminal domain GIY02_22175 PF00999 Sodium/hydrogen exchanger family GIY02_22175 PF03471 Transporter associated domain GIY02_22175 PF02080 TrkA-C domain GIY02_22180 PF17676 LD-carboxypeptidase C-terminal domain GIY02_22180 PF02016 LD-carboxypeptidase N-terminal domain GIY02_22185 PF01464 Transglycosylase SLT domain GIY02_22190 PF07715 TonB-dependent Receptor Plug Domain GIY02_22190 PF00593 TonB dependent receptor GIY02_22195 PF01204 Trehalase GIY02_22205 PF07690 Major Facilitator Superfamily GIY02_22210 PF03466 LysR substrate binding domain GIY02_22210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_22215 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_22220 PF03222 Tryptophan/tyrosine permease family GIY02_22225 PF00871 Acetokinase family GIY02_22230 PF02901 Pyruvate formate lyase-like GIY02_22230 PF01228 Glycine radical GIY02_22235 PF03315 Serine dehydratase beta chain GIY02_22235 PF03313 Serine dehydratase alpha chain GIY02_22240 PF00849 RNA pseudouridylate synthase GIY02_22245 PF00005 ABC transporter GIY02_22255 PF01032 FecCD transport family GIY02_22275 PF00691 OmpA family GIY02_22275 PF05736 OprF membrane domain GIY02_22365 PF00589 Phage integrase family GIY02_22365 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain GIY02_22375 PF06630 Enterobacterial exodeoxyribonuclease VIII GIY02_22375 PF12684 PDDEXK-like domain of unknown function (DUF3799) GIY02_22455 PF06183 DinI-like family GIY02_22465 PF01726 LexA DNA binding domain GIY02_22465 PF00717 Peptidase S24-like GIY02_22470 PF06147 Protein of unknown function (DUF968) GIY02_22495 PF00959 Phage lysozyme GIY02_22575 PF04984 Phage tail sheath protein subtilisin-like domain GIY02_22575 PF17482 Phage tail sheath C-terminal domain GIY02_22630 PF01757 Acyltransferase family GIY02_22670 PF00717 Peptidase S24-like GIY02_22675 PF16671 Actin cross-linking domain GIY02_22675 PF04717 Type VI secretion system, phage-baseplate injector GIY02_22690 PF05593 RHS Repeat GIY02_22690 PF03527 RHS protein GIY02_22740 PF03707 Bacterial signalling protein N terminal repeat GIY02_22740 PF00563 EAL domain GIY02_22740 PF00990 Diguanylate cyclase, GGDEF domain GIY02_22755 PF00990 Diguanylate cyclase, GGDEF domain GIY02_22760 PF01966 HD domain GIY02_22765 PF03279 Bacterial lipid A biosynthesis acyltransferase GIY02_22770 PF01810 LysE type translocator GIY02_22775 PF10749 Protein of unknown function (DUF2534) GIY02_22795 PF13185 GAF domain GIY02_22795 PF00990 Diguanylate cyclase, GGDEF domain GIY02_22800 PF03891 Domain of unknown function (DUF333) GIY02_22805 PF04343 Protein of unknown function, DUF488 GIY02_22810 PF06418 CTP synthase N-terminus GIY02_22810 PF00117 Glutamine amidotransferase class-I GIY02_22815 PF07690 Major Facilitator Superfamily GIY02_22820 PF02311 AraC-like ligand binding domain GIY02_22820 PF12833 Helix-turn-helix domain GIY02_22825 PF04284 Protein of unknown function (DUF441) GIY02_22830 PF04073 Aminoacyl-tRNA editing domain GIY02_22835 PF00990 Diguanylate cyclase, GGDEF domain GIY02_22835 PF17155 Gammaproteobacterial periplasmic sensor domain GIY02_22845 PF04285 Protein of unknown function (DUF444) GIY02_22850 PF06798 PrkA serine protein kinase C-terminal domain GIY02_22850 PF08298 PrkA AAA domain GIY02_22855 PF06629 MltA-interacting protein MipA GIY02_22860 PF01263 Aldose 1-epimerase GIY02_22865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GIY02_22865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GIY02_22870 PF01641 SelR domain GIY02_22875 PF07023 Protein of unknown function (DUF1315) GIY02_22880 PF00041 Fibronectin type III domain GIY02_22880 PF00704 Glycosyl hydrolases family 18 GIY02_22885 PF00857 Isochorismatase family GIY02_22890 PF17763 Glutaminase/Asparaginase C-terminal domain GIY02_22890 PF00710 Asparaginase, N-terminal GIY02_22895 PF01343 Peptidase family S49 GIY02_22900 PF00881 Nitroreductase family GIY02_22905 PF01569 PAP2 superfamily GIY02_22910 PF00586 AIR synthase related protein, N-terminal domain GIY02_22910 PF02769 AIR synthase related protein, C-terminal domain GIY02_22915 PF01751 Toprim domain GIY02_22915 PF01131 DNA topoisomerase GIY02_22925 PF16197 Ketoacyl-synthetase C-terminal extension GIY02_22925 PF00109 Beta-ketoacyl synthase, N-terminal domain GIY02_22925 PF02801 Beta-ketoacyl synthase, C-terminal domain GIY02_22925 PF08659 KR domain GIY02_22925 PF00550 Phosphopantetheine attachment site GIY02_22925 PF14765 Polyketide synthase dehydratase GIY02_22925 PF00107 Zinc-binding dehydrogenase GIY02_22925 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_22925 PF00698 Acyl transferase domain GIY02_22930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GIY02_22930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GIY02_22935 PF00293 NUDIX domain GIY02_22940 PF01066 CDP-alcohol phosphatidyltransferase GIY02_22950 PF00005 ABC transporter GIY02_22955 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_22960 PF13416 Bacterial extracellular solute-binding protein GIY02_22965 PF02627 Carboxymuconolactone decarboxylase family GIY02_22970 PF09335 SNARE associated Golgi protein GIY02_22975 PF09335 SNARE associated Golgi protein GIY02_22980 PF03372 Endonuclease/Exonuclease/phosphatase family GIY02_22985 PF00202 Aminotransferase class-III GIY02_22990 PF04958 Arginine N-succinyltransferase beta subunit GIY02_22995 PF00171 Aldehyde dehydrogenase family GIY02_23000 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GIY02_23015 PF02540 NAD synthase GIY02_23020 PF04355 SmpA / OmlA family GIY02_23025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_23030 PF02378 Phosphotransferase system, EIIC GIY02_23035 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GIY02_23040 PF12833 Helix-turn-helix domain GIY02_23040 PF07883 Cupin domain GIY02_23045 PF02056 Family 4 glycosyl hydrolase GIY02_23045 PF11975 Family 4 glycosyl hydrolase C-terminal domain GIY02_23050 PF04794 YdjC-like protein GIY02_23055 PF06628 Catalase-related immune-responsive GIY02_23055 PF18011 C-terminal domain found in long catalases GIY02_23055 PF00199 Catalase GIY02_23060 PF10729 Cell division activator CedA GIY02_23070 PF04307 LexA-binding, inner membrane-associated putative hydrolase GIY02_23075 PF13419 Haloacid dehalogenase-like hydrolase GIY02_23080 PF14002 YniB-like protein GIY02_23085 PF03061 Thioesterase superfamily GIY02_23090 PF04279 Intracellular septation protein A GIY02_23100 PF03692 Putative zinc- or iron-chelating domain GIY02_23105 PF03922 OmpW family GIY02_23110 PF03466 LysR substrate binding domain GIY02_23110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_23120 PF11742 Protein of unknown function (DUF3302) GIY02_23125 PF00529 HlyD membrane-fusion protein of T1SS GIY02_23125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_23130 PF00107 Zinc-binding dehydrogenase GIY02_23130 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_23140 PF00290 Tryptophan synthase alpha chain GIY02_23145 PF00291 Pyridoxal-phosphate dependent enzyme GIY02_23150 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GIY02_23150 PF00218 Indole-3-glycerol phosphate synthase GIY02_23155 PF02885 Glycosyl transferase family, helical bundle domain GIY02_23155 PF00591 Glycosyl transferase family, a/b domain GIY02_23155 PF00117 Glutamine amidotransferase class-I GIY02_23160 PF00425 chorismate binding enzyme GIY02_23160 PF04715 Anthranilate synthase component I, N terminal region GIY02_23165 PF02811 PHP domain GIY02_23170 PF01300 Telomere recombination GIY02_23180 PF00563 EAL domain GIY02_23180 PF00498 FHA domain GIY02_23180 PF00990 Diguanylate cyclase, GGDEF domain GIY02_23185 PF01479 S4 domain GIY02_23185 PF00849 RNA pseudouridylate synthase GIY02_23200 PF12833 Helix-turn-helix domain GIY02_23205 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GIY02_23205 PF12557 Cob(I)alamin adenosyltransferase N terminal GIY02_23210 PF00106 short chain dehydrogenase GIY02_23215 PF01343 Peptidase family S49 GIY02_23215 PF08496 Peptidase family S49 N-terminal GIY02_23220 PF10692 Protein of unknown function (DUF2498) GIY02_23225 PF01396 Topoisomerase DNA binding C4 zinc finger GIY02_23225 PF01751 Toprim domain GIY02_23225 PF01131 DNA topoisomerase GIY02_23225 PF08272 Topoisomerase I zinc-ribbon-like GIY02_23230 PF03466 LysR substrate binding domain GIY02_23230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_23240 PF00694 Aconitase C-terminal domain GIY02_23240 PF00330 Aconitase family (aconitate hydratase) GIY02_23245 PF00925 GTP cyclohydrolase II GIY02_23250 PF01569 PAP2 superfamily GIY02_23255 PF06305 Lipopolysaccharide assembly protein A domain GIY02_23260 PF18073 Rubredoxin metal binding domain GIY02_23265 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GIY02_23270 PF01253 Translation initiation factor SUI1 GIY02_23275 PF05433 Glycine zipper 2TM domain GIY02_23280 PF00455 DeoR C terminal sensor domain GIY02_23280 PF08220 DeoR-like helix-turn-helix domain GIY02_23290 PF17876 Cold shock domain GIY02_23290 PF08206 Ribonuclease B OB domain GIY02_23290 PF00575 S1 RNA binding domain GIY02_23290 PF00773 RNB domain GIY02_23310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GIY02_23315 PF00005 ABC transporter GIY02_23320 PF00005 ABC transporter GIY02_23320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_23325 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_23325 PF12911 N-terminal TM domain of oligopeptide transport permease C GIY02_23330 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_23335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_23345 PF12833 Helix-turn-helix domain GIY02_23350 PF01546 Peptidase family M20/M25/M40 GIY02_23350 PF07687 Peptidase dimerisation domain GIY02_23355 PF07690 Major Facilitator Superfamily GIY02_23360 PF02954 Bacterial regulatory protein, Fis family GIY02_23360 PF00158 Sigma-54 interaction domain GIY02_23365 PF04012 PspA/IM30 family GIY02_23370 PF06667 Phage shock protein B GIY02_23375 PF04024 PspC domain GIY02_23380 PF09584 Phage shock protein PspD (Phageshock_PspD) GIY02_23385 PF04317 YcjX-like family, DUF463 GIY02_23390 PF05128 Domain of unknown function (DUF697) GIY02_23400 PF05145 Transition state regulatory protein AbrB GIY02_23405 PF08534 Redoxin GIY02_23410 PF13378 Enolase C-terminal domain-like GIY02_23410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GIY02_23415 PF00246 Zinc carboxypeptidase GIY02_23420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_23425 PF00356 Bacterial regulatory proteins, lacI family GIY02_23430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GIY02_23440 PF03611 PTS system sugar-specific permease component GIY02_23445 PF00834 Ribulose-phosphate 3 epimerase family GIY02_23455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_23460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_23460 PF02378 Phosphotransferase system, EIIC GIY02_23465 PF00248 Aldo/keto reductase family GIY02_23495 PF07724 AAA domain (Cdc48 subfamily) GIY02_23495 PF10431 C-terminal, D2-small domain, of ClpB protein GIY02_23495 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_23495 PF17871 AAA lid domain GIY02_23515 PF01965 DJ-1/PfpI family GIY02_23525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GIY02_23525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GIY02_23530 PF08220 DeoR-like helix-turn-helix domain GIY02_23530 PF00455 DeoR C terminal sensor domain GIY02_23535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_23535 PF00005 ABC transporter GIY02_23545 PF00480 ROK family GIY02_23550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_23555 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_23565 PF00480 ROK family GIY02_23570 PF00583 Acetyltransferase (GNAT) family GIY02_23575 PF01544 CorA-like Mg2+ transporter protein GIY02_23580 PF03880 DbpA RNA binding domain GIY02_23580 PF00271 Helicase conserved C-terminal domain GIY02_23580 PF00270 DEAD/DEAH box helicase GIY02_23585 PF01171 PP-loop family GIY02_23590 PF00582 Universal stress protein family GIY02_23595 PF00267 Gram-negative porin GIY02_23605 PF03891 Domain of unknown function (DUF333) GIY02_23610 PF03724 META domain GIY02_23615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GIY02_23615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GIY02_23620 PF09335 SNARE associated Golgi protein GIY02_23625 PF11739 Dicarboxylate transport GIY02_23630 PF13617 YnbE-like lipoprotein GIY02_23635 PF07027 Protein of unknown function (DUF1318) GIY02_23640 PF12833 Helix-turn-helix domain GIY02_23640 PF14525 AraC-binding-like domain GIY02_23645 PF00171 Aldehyde dehydrogenase family GIY02_23660 PF00171 Aldehyde dehydrogenase family GIY02_23660 PF01575 MaoC like domain GIY02_23665 PF05138 Phenylacetic acid catabolic protein GIY02_23670 PF06243 Phenylacetic acid degradation B GIY02_23675 PF05138 Phenylacetic acid catabolic protein GIY02_23680 PF01883 Iron-sulfur cluster assembly protein GIY02_23685 PF00175 Oxidoreductase NAD-binding domain GIY02_23685 PF00970 Oxidoreductase FAD-binding domain GIY02_23685 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_23690 PF00378 Enoyl-CoA hydratase/isomerase GIY02_23695 PF00378 Enoyl-CoA hydratase/isomerase GIY02_23705 PF03061 Thioesterase superfamily GIY02_23710 PF02803 Thiolase, C-terminal domain GIY02_23710 PF00108 Thiolase, N-terminal domain GIY02_23715 PF14535 AMP-binding enzyme C-terminal domain GIY02_23715 PF00501 AMP-binding enzyme GIY02_23720 PF07848 PaaX-like protein GIY02_23720 PF08223 PaaX-like protein C-terminal domain GIY02_23725 PF00132 Bacterial transferase hexapeptide (six repeats) GIY02_23735 PF02525 Flavodoxin-like fold GIY02_23740 PF11898 Domain of unknown function (DUF3418) GIY02_23740 PF00271 Helicase conserved C-terminal domain GIY02_23740 PF00270 DEAD/DEAH box helicase GIY02_23740 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GIY02_23740 PF04408 Helicase associated domain (HA2) GIY02_23745 PF01596 O-methyltransferase GIY02_23750 PF02321 Outer membrane efflux protein GIY02_23755 PF13533 Biotin-lipoyl like GIY02_23770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GIY02_23770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GIY02_23775 PF00202 Aminotransferase class-III GIY02_23780 PF04958 Arginine N-succinyltransferase beta subunit GIY02_23785 PF00171 Aldehyde dehydrogenase family GIY02_23790 PF04996 Succinylarginine dihydrolase GIY02_23795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GIY02_23800 PF00324 Amino acid permease GIY02_23805 PF02698 DUF218 domain GIY02_23810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GIY02_23810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GIY02_23820 PF17508 Microcin V bacteriocin GIY02_23825 PF02517 CPBP intramembrane metalloprotease GIY02_23830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GIY02_23830 PF00529 HlyD membrane-fusion protein of T1SS GIY02_23835 PF03412 Peptidase C39 family GIY02_23835 PF00664 ABC transporter transmembrane region GIY02_23835 PF00005 ABC transporter GIY02_23845 PF01292 Prokaryotic cytochrome b561 GIY02_23850 PF07690 Major Facilitator Superfamily GIY02_23860 PF02583 Metal-sensitive transcriptional repressor GIY02_23865 PF00107 Zinc-binding dehydrogenase GIY02_23865 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_23880 PF01011 PQQ enzyme repeat GIY02_23885 PF03466 LysR substrate binding domain GIY02_23885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_23890 PF00775 Dioxygenase GIY02_23895 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal GIY02_23895 PF00775 Dioxygenase GIY02_23900 PF07063 Domain of unknown function (DUF1338) GIY02_23905 PF00135 Carboxylesterase family GIY02_23910 PF03466 LysR substrate binding domain GIY02_23910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_23915 PF00857 Isochorismatase family GIY02_23925 PF00155 Aminotransferase class I and II GIY02_23930 PF00497 Bacterial extracellular solute-binding proteins, family 3 GIY02_23935 PF00107 Zinc-binding dehydrogenase GIY02_23935 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_23945 PF04349 Periplasmic glucan biosynthesis protein, MdoG GIY02_23950 PF13302 Acetyltransferase (GNAT) domain GIY02_23955 PF18836 Beta solenoid repeat from YDCK GIY02_23960 PF03595 Voltage-dependent anion channel GIY02_23965 PF03848 Tellurite resistance protein TehB GIY02_23970 PF07687 Peptidase dimerisation domain GIY02_23970 PF01546 Peptidase family M20/M25/M40 GIY02_23975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_23980 PF11769 Protein of unknown function (DUF3313) GIY02_23985 PF00892 EamA-like transporter family GIY02_23990 PF06445 GyrI-like small molecule binding domain GIY02_23990 PF12833 Helix-turn-helix domain GIY02_23995 PF03594 Benzoate membrane transport protein GIY02_24000 PF01381 Helix-turn-helix GIY02_24000 PF07883 Cupin domain GIY02_24005 PF01136 Peptidase family U32 GIY02_24005 PF12392 Collagenase GIY02_24020 PF02322 Cytochrome bd terminal oxidase subunit II GIY02_24025 PF01654 Cytochrome bd terminal oxidase subunit I GIY02_24030 PF00155 Aminotransferase class I and II GIY02_24030 PF00392 Bacterial regulatory proteins, gntR family GIY02_24035 PF13416 Bacterial extracellular solute-binding protein GIY02_24040 PF08402 TOBE domain GIY02_24040 PF00005 ABC transporter GIY02_24045 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_24050 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_24055 PF00171 Aldehyde dehydrogenase family GIY02_24075 PF10753 Toxin GhoT_OrtT GIY02_24080 PF00561 alpha/beta hydrolase fold GIY02_24085 PF00171 Aldehyde dehydrogenase family GIY02_24090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_24095 PF10735 Protein of unknown function (DUF2526) GIY02_24100 PF04657 Putative inner membrane exporter, YdcZ GIY02_24105 PF00583 Acetyltransferase (GNAT) family GIY02_24110 PF01381 Helix-turn-helix GIY02_24110 PF08671 Anti-repressor SinI GIY02_24115 PF00107 Zinc-binding dehydrogenase GIY02_24115 PF16884 N-terminal domain of oxidoreductase GIY02_24120 PF04175 Protein of unknown function (DUF406) GIY02_24125 PF00593 TonB dependent receptor GIY02_24125 PF07715 TonB-dependent Receptor Plug Domain GIY02_24140 PF00324 Amino acid permease GIY02_24145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_24145 PF03466 LysR substrate binding domain GIY02_24155 PF00296 Luciferase-like monooxygenase GIY02_24165 PF00296 Luciferase-like monooxygenase GIY02_24180 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_24185 PF00005 ABC transporter GIY02_24200 PF13417 Glutathione S-transferase, N-terminal domain GIY02_24205 PF01361 Tautomerase enzyme GIY02_24225 PF01613 Flavin reductase like domain GIY02_24230 PF00797 N-acetyltransferase GIY02_24235 PF02665 Nitrate reductase gamma subunit GIY02_24240 PF02613 Nitrate reductase delta subunit GIY02_24245 PF13247 4Fe-4S dicluster domain GIY02_24245 PF14711 Respiratory nitrate reductase beta C-terminal GIY02_24250 PF01568 Molydopterin dinucleotide binding domain GIY02_24250 PF14710 Respiratory nitrate reductase alpha N-terminal GIY02_24250 PF00384 Molybdopterin oxidoreductase GIY02_24255 PF07690 Major Facilitator Superfamily GIY02_24265 PF07690 Major Facilitator Superfamily GIY02_24270 PF09339 IclR helix-turn-helix domain GIY02_24270 PF01614 Bacterial transcriptional regulator GIY02_24275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GIY02_24275 PF13378 Enolase C-terminal domain-like GIY02_24280 PF02426 Muconolactone delta-isomerase GIY02_24285 PF00775 Dioxygenase GIY02_24285 PF04444 Catechol dioxygenase N terminus GIY02_24290 PF00355 Rieske [2Fe-2S] domain GIY02_24290 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GIY02_24295 PF00866 Ring hydroxylating beta subunit GIY02_24300 PF00970 Oxidoreductase FAD-binding domain GIY02_24300 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_24300 PF00175 Oxidoreductase NAD-binding domain GIY02_24305 PF00106 short chain dehydrogenase GIY02_24310 PF00892 EamA-like transporter family GIY02_24320 PF09163 Formate dehydrogenase N, transmembrane GIY02_24320 PF12800 4Fe-4S binding domain GIY02_24320 PF13247 4Fe-4S dicluster domain GIY02_24325 PF01292 Prokaryotic cytochrome b561 GIY02_24340 PF03976 Polyphosphate kinase 2 (PPK2) GIY02_24345 PF08803 Putative mono-oxygenase ydhR GIY02_24360 PF13458 Periplasmic binding protein GIY02_24365 PF02653 Branched-chain amino acid transport system / permease component GIY02_24370 PF02653 Branched-chain amino acid transport system / permease component GIY02_24370 PF11862 Domain of unknown function (DUF3382) GIY02_24375 PF12399 Branched-chain amino acid ATP-binding cassette transporter GIY02_24375 PF00005 ABC transporter GIY02_24380 PF00005 ABC transporter GIY02_24385 PF07690 Major Facilitator Superfamily GIY02_24395 PF00296 Luciferase-like monooxygenase GIY02_24400 PF00005 ABC transporter GIY02_24400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GIY02_24410 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_24415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GIY02_24420 PF08240 Alcohol dehydrogenase GroES-like domain GIY02_24420 PF00107 Zinc-binding dehydrogenase GIY02_24430 PF00005 ABC transporter GIY02_24430 PF12848 ABC transporter GIY02_24440 PF00106 short chain dehydrogenase GIY02_24445 PF07690 Major Facilitator Superfamily GIY02_24450 PF00356 Bacterial regulatory proteins, lacI family GIY02_24455 PF00390 Malic enzyme, N-terminal domain GIY02_24455 PF03949 Malic enzyme, NAD binding domain GIY02_24460 PF08136 30S ribosomal protein subunit S22 family GIY02_24470 PF03466 LysR substrate binding domain GIY02_24470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_24475 PF02566 OsmC-like protein GIY02_24485 PF01545 Cation efflux family GIY02_24485 PF16916 Dimerisation domain of Zinc Transporter GIY02_24490 PF04261 Dyp-type peroxidase family GIY02_24495 PF01062 Bestrophin, RFP-TM, chloride channel GIY02_24505 PF02322 Cytochrome bd terminal oxidase subunit II GIY02_24510 PF01654 Cytochrome bd terminal oxidase subunit I GIY02_24515 PF00384 Molybdopterin oxidoreductase GIY02_24520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_24520 PF03466 LysR substrate binding domain GIY02_24525 PF03466 LysR substrate binding domain GIY02_24525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_24535 PF00083 Sugar (and other) transporter GIY02_24545 PF00689 Cation transporting ATPase, C-terminus GIY02_24545 PF00690 Cation transporter/ATPase, N-terminus GIY02_24560 PF00440 Bacterial regulatory proteins, tetR family GIY02_24565 PF03969 AFG1-like ATPase GIY02_24570 PF00141 Peroxidase GIY02_24575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_24575 PF03466 LysR substrate binding domain GIY02_24595 PF03717 Penicillin-binding Protein dimerisation domain GIY02_24595 PF00905 Penicillin binding protein transpeptidase domain GIY02_24600 PF00675 Insulinase (Peptidase family M16) GIY02_24605 PF04055 Radical SAM superfamily GIY02_24605 PF13186 Iron-sulfur cluster-binding domain GIY02_24610 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GIY02_24615 PF03070 TENA/THI-4/PQQC family GIY02_24620 PF12706 Beta-lactamase superfamily domain GIY02_24625 PF08042 PqqA family GIY02_24630 PF01244 Membrane dipeptidase (Peptidase family M19) GIY02_24640 PF00486 Transcriptional regulatory protein, C terminal GIY02_24640 PF00072 Response regulator receiver domain GIY02_24645 PF16527 Two-component sensor protein CpxA, periplasmic domain GIY02_24645 PF00672 HAMP domain GIY02_24645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GIY02_24645 PF00512 His Kinase A (phospho-acceptor) domain GIY02_24650 PF02683 Cytochrome C biogenesis protein transmembrane region GIY02_24650 PF17991 Thioredoxin like C-terminal domain GIY02_24650 PF00578 AhpC/TSA family GIY02_24655 PF00282 Pyridoxal-dependent decarboxylase conserved domain GIY02_24660 PF00202 Aminotransferase class-III GIY02_24665 PF09084 NMT1/THI5 like GIY02_24670 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_24675 PF00005 ABC transporter GIY02_24680 PF03070 TENA/THI-4/PQQC family GIY02_24715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_24715 PF03466 LysR substrate binding domain GIY02_24720 PF03060 Nitronate monooxygenase GIY02_24730 PF10697 Protein of unknown function (DUF2502) GIY02_24750 PF00691 OmpA family GIY02_24750 PF13677 Membrane MotB of proton-channel complex MotA/MotB GIY02_24795 PF05638 Type VI secretion system effector, Hcp GIY02_24835 PF07724 AAA domain (Cdc48 subfamily) GIY02_24835 PF00004 ATPase family associated with various cellular activities (AAA) GIY02_24835 PF17871 AAA lid domain GIY02_24835 PF10431 C-terminal, D2-small domain, of ClpB protein GIY02_24840 PF00069 Protein kinase domain GIY02_24840 PF03793 PASTA domain GIY02_24850 PF04717 Type VI secretion system, phage-baseplate injector GIY02_24930 PF00924 Mechanosensitive ion channel GIY02_24935 PF18014 Acetyltransferase (GNAT) domain GIY02_24935 PF13673 Acetyltransferase (GNAT) domain GIY02_24950 PF00111 2Fe-2S iron-sulfur cluster binding domain GIY02_24955 PF00355 Rieske [2Fe-2S] domain GIY02_24960 PF03466 LysR substrate binding domain GIY02_24960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_24965 PF01494 FAD binding domain GIY02_24970 PF00860 Permease family GIY02_24980 PF00576 HIUase/Transthyretin family GIY02_24985 PF01979 Amidohydrolase family GIY02_24990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GIY02_25000 PF01177 Asp/Glu/Hydantoin racemase GIY02_25015 PF01425 Amidase GIY02_25040 PF00528 Binding-protein-dependent transport system inner membrane component GIY02_25050 PF00005 ABC transporter GIY02_25055 PF00266 Aminotransferase class-V GIY02_25060 PF01546 Peptidase family M20/M25/M40 GIY02_25060 PF07687 Peptidase dimerisation domain GIY02_25065 PF07690 Major Facilitator Superfamily GIY02_25070 PF03466 LysR substrate binding domain GIY02_25070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_25115 PF00873 AcrB/AcrD/AcrF family GIY02_25140 PF00248 Aldo/keto reductase family GIY02_25145 PF02525 Flavodoxin-like fold GIY02_25155 PF00248 Aldo/keto reductase family GIY02_25170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_25170 PF03466 LysR substrate binding domain GIY02_25175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GIY02_25175 PF03466 LysR substrate binding domain GIY02_25180 PF00248 Aldo/keto reductase family GIY02_25185 PF00248 Aldo/keto reductase family GIY02_25190 PF00248 Aldo/keto reductase family GIY02_25200 PF00356 Bacterial regulatory proteins, lacI family GIY02_25205 PF00480 ROK family GIY02_25210 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GIY02_25215 PF02378 Phosphotransferase system, EIIC GIY02_25220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GIY02_25225 PF02378 Phosphotransferase system, EIIC GIY02_25230 PF02264 LamB porin GIY02_25240 PF00232 Glycosyl hydrolase family 1 GIY02_25250 PF00263 Bacterial type II and III secretion system protein GIY02_25250 PF03958 Bacterial type II/III secretion system short domain GIY02_25250 PF00263 Bacterial type II and III secretion system protein GIY02_25250 PF03958 Bacterial type II/III secretion system short domain GIY02_25305 PF00263 Bacterial type II and III secretion system protein GIY02_25305 PF03958 Bacterial type II/III secretion system short domain GIY02_25305 PF00263 Bacterial type II and III secretion system protein GIY02_25305 PF03958 Bacterial type II/III secretion system short domain GIY02_25360 PF03958 Bacterial type II/III secretion system short domain GIY02_25360 PF00263 Bacterial type II and III secretion system protein GIY02_25360 PF00263 Bacterial type II and III secretion system protein GIY02_25360 PF03958 Bacterial type II/III secretion system short domain