locus-tag	class	description
GIY02_00095	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
GIY02_00105	COG0745	RESPONSE REGULATOR receiver
GIY02_00105	COG4191	Histidine kinase
GIY02_00105	COG2205	protein histidine kinase activity
GIY02_00120	COG2814	Major facilitator Superfamily
GIY02_00135	COG4529	Protein conserved in bacteria
GIY02_00145	COG0401	homolog of Blt101
GIY02_00150	COG1312	Catalyzes the dehydration of D-mannonate
GIY02_00155	COG2610	gluconate transmembrane transporter activity
GIY02_00175	COG0626	cystathionine gamma-synthase activity
GIY02_00185	COG3111	PFAM Bacterial OB fold (BOF) protein
GIY02_00195	COG2323	membrane
GIY02_00200	COG3685	Protein conserved in bacteria
GIY02_00205	COG3685	Protein conserved in bacteria
GIY02_00210	COG3729	General stress protein
GIY02_00215	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_00240	COG2207	Transcriptional regulator
GIY02_00245	COG4628	conserved protein (DUF2132)
GIY02_00265	COG2011	ABC-type metal ion transport system permease component
GIY02_00270	COG2070	2-Nitropropane dioxygenase
GIY02_00280	COG0477	Major facilitator Superfamily
GIY02_00285	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GIY02_00290	COG0697	spore germination
GIY02_00300	COG0477	Major facilitator Superfamily
GIY02_00320	COG1349	DNA-binding transcription factor activity
GIY02_00325	COG3395	kinase activity
GIY02_00330	COG0235	Class ii aldolase
GIY02_00335	COG3622	Belongs to the hyi family
GIY02_00340	COG2271	Major facilitator Superfamily
GIY02_00345	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GIY02_00370	COG2199	diguanylate cyclase activity
GIY02_00385	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_00395	COG1349	DNA-binding transcription factor activity
GIY02_00400	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
GIY02_00405	COG3395	kinase activity
GIY02_00415	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GIY02_00435	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_00455	COG1846	Transcriptional regulator
GIY02_00470	COG0697	spore germination
GIY02_00475	COG2814	Major facilitator Superfamily
GIY02_00485	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GIY02_00510	COG2199	diguanylate cyclase activity
GIY02_00510	COG2203	Gaf domain
GIY02_00530	COG2223	nitrite transmembrane transporter activity
GIY02_00535	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GIY02_00550	COG4221	oxidoreductase activity
GIY02_00555	COG1802	Transcriptional regulator
GIY02_00560	COG0589	response to stress
GIY02_00565	COG0246	Mannitol dehydrogenase
GIY02_00570	COG0477	Major facilitator Superfamily
GIY02_00575	COG1063	alcohol dehydrogenase
GIY02_00580	COG4948	Mandelate Racemase Muconate Lactonizing
GIY02_00585	COG2271	Major facilitator Superfamily
GIY02_00600	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GIY02_00620	COG0437	4 iron, 4 sulfur cluster binding
GIY02_00625	COG3302	dmso reductase anchor subunit
GIY02_00640	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
GIY02_00645	COG1940	carbohydrate kinase activity
GIY02_00650	COG0583	DNA-binding transcription factor activity
GIY02_00655	COG2814	Major facilitator Superfamily
GIY02_00660	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
GIY02_00680	COG3591	Belongs to the peptidase S1B family
GIY02_00705	COG0628	permease
GIY02_00735	COG0679	Auxin Efflux Carrier
GIY02_00745	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GIY02_00760	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GIY02_00765	COG3290	protein histidine kinase activity
GIY02_00770	COG4565	transcriptional regulatory protein
GIY02_00780	COG1053	succinate dehydrogenase
GIY02_00795	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
GIY02_00795	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
GIY02_00805	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GIY02_00810	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GIY02_00820	COG0183	Belongs to the thiolase family
GIY02_00825	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GIY02_00835	COG1414	Transcriptional regulator
GIY02_00840	COG2840	Smr protein MutS2
GIY02_00845	COG0583	DNA-binding transcription factor activity
GIY02_00855	COG1473	amidohydrolase
GIY02_00860	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
GIY02_00865	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GIY02_00870	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GIY02_00885	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GIY02_00890	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
GIY02_00900	COG0531	amino acid
GIY02_00910	COG3136	membrane protein required for alginate biosynthesis
GIY02_00915	COG0745	RESPONSE REGULATOR receiver
GIY02_00995	COG0582	viral genome integration into host DNA
GIY02_01000	COG2205	protein histidine kinase activity
GIY02_01020	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
GIY02_01020	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
GIY02_01025	COG1482	cell wall glycoprotein biosynthetic process
GIY02_01030	COG5339	Protein conserved in bacteria
GIY02_01035	COG1609	Transcriptional regulator
GIY02_01040	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_01040	COG1263	PTS System
GIY02_01045	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
GIY02_01055	COG2391	methyltransferase activity
GIY02_01060	COG0425	Belongs to the sulfur carrier protein TusA family
GIY02_01075	COG1464	Belongs to the NlpA lipoprotein family
GIY02_01080	COG5562	phage envelope protein
GIY02_01090	COG0673	inositol 2-dehydrogenase activity
GIY02_01100	COG2723	6-phospho-beta-galactosidase activity
GIY02_01135	COG4659	FMN binding
GIY02_01145	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GIY02_01160	COG0625	glutathione transferase activity
GIY02_01165	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
GIY02_01180	COG3895	Periplasmic Protein
GIY02_01190	COG3133	Outer membrane lipoprotein
GIY02_01195	COG3706	GGDEF domain
GIY02_01210	COG1566	PFAM secretion protein HlyD family protein
GIY02_01215	COG1289	transmembrane transporter activity
GIY02_01220	COG2032	superoxide dismutase activity
GIY02_01225	COG4989	oxidoreductase activity
GIY02_01230	COG3313	Fe-S protein
GIY02_01235	COG1309	transcriptional regulator
GIY02_01240	COG1902	pentaerythritol trinitrate reductase activity
GIY02_01245	COG0346	lactoylglutathione lyase activity
GIY02_01255	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
GIY02_01260	COG0791	NLP P60 protein
GIY02_01265	COG2207	Transcriptional regulator
GIY02_01265	COG3708	Transcriptional regulator
GIY02_01270	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GIY02_01275	COG2814	Major facilitator Superfamily
GIY02_01290	COG0583	DNA-binding transcription factor activity
GIY02_01295	COG2814	Major facilitator Superfamily
GIY02_01300	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GIY02_01305	COG0307	riboflavin synthase, alpha
GIY02_01310	COG0534	Mate efflux family protein
GIY02_01385	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GIY02_01390	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GIY02_01395	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GIY02_01405	COG0549	Belongs to the carbamate kinase family
GIY02_01410	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
GIY02_01410	COG3608	succinylglutamate desuccinylase aspartoacylase
GIY02_01415	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GIY02_01440	COG0583	DNA-binding transcription factor activity
GIY02_01450	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GIY02_01460	COG1250	3-hydroxyacyl-CoA dehydrogenase
GIY02_01465	COG2610	gluconate transmembrane transporter activity
GIY02_01470	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_01500	COG1138	Cytochrome C-type biogenesis protein
GIY02_01530	COG1175	transmembrane transport
GIY02_01550	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
GIY02_01555	COG3383	formate dehydrogenase (NAD+) activity
GIY02_01595	COG0456	acetyltransferase
GIY02_01600	COG1396	sequence-specific DNA binding
GIY02_01605	COG0406	alpha-ribazole phosphatase activity
GIY02_01625	COG1309	transcriptional regulator
GIY02_01630	COG0251	oxidation-reduction process
GIY02_01655	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_01660	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GIY02_01665	COG0697	spore germination
GIY02_01670	COG2271	Major facilitator Superfamily
GIY02_01685	COG0163	prenyltransferase activity
GIY02_01690	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
GIY02_01700	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GIY02_01735	COG2378	regulation of single-species biofilm formation
GIY02_01740	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_01745	COG1683	Conserved Protein
GIY02_01750	COG1473	amidohydrolase
GIY02_01760	COG1126	abc transporter atp-binding protein
GIY02_01765	COG0765	amino acid transport
GIY02_01785	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_01790	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_01795	COG1120	ATPase activity
GIY02_01800	COG4774	siderophore transport
GIY02_01805	COG1116	anion transmembrane transporter activity
GIY02_01810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GIY02_01830	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_01835	COG0583	DNA-binding transcription factor activity
GIY02_01880	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GIY02_01885	COG2271	Major facilitator Superfamily
GIY02_01915	COG1376	ErfK ybiS ycfS ynhG family protein
GIY02_01930	COG0719	Fe-S assembly protein
GIY02_01935	COG0396	ATPase activity
GIY02_01940	COG0719	Fe-S assembly protein
GIY02_01945	COG0316	Belongs to the HesB IscA family
GIY02_01955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GIY02_01970	COG2261	transglycosylase associated protein
GIY02_01975	COG3422	double-strand break repair
GIY02_01980	COG2050	protein possibly involved in aromatic compounds catabolism
GIY02_01985	COG0247	lactate metabolic process
GIY02_01985	COG0277	FAD linked oxidase domain protein
GIY02_01990	COG0628	permease
GIY02_02000	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GIY02_02000	COG0574	Belongs to the PEP-utilizing enzyme family
GIY02_02015	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GIY02_02020	COG4256	Hemin uptake protein
GIY02_02030	COG0791	NLP P60 protein
GIY02_02040	COG0386	Belongs to the glutathione peroxidase family
GIY02_02060	COG0583	DNA-binding transcription factor activity
GIY02_02080	COG0072	phenylalanine-tRNA ligase activity
GIY02_02080	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GIY02_02095	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GIY02_02115	COG3137	Salt-induced outer membrane protein
GIY02_02120	COG1105	Belongs to the carbohydrate kinase PfkB family
GIY02_02135	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GIY02_02140	COG2350	Protein conserved in bacteria
GIY02_02160	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GIY02_02170	COG0444	Belongs to the ABC transporter superfamily
GIY02_02175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GIY02_02180	COG0601	transmembrane transport
GIY02_02190	COG2095	MarC family integral membrane protein
GIY02_02195	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_02195	COG1454	alcohol dehydrogenase
GIY02_02205	COG2916	Histone family protein nucleoid-structuring protein H-NS
GIY02_02210	COG1210	Utp--glucose-1-phosphate uridylyltransferase
GIY02_02215	COG0745	RESPONSE REGULATOR receiver
GIY02_02220	COG1752	Esterase of the alpha-beta hydrolase superfamily
GIY02_02230	COG0788	formyltetrahydrofolate deformylase activity
GIY02_02280	COG1522	sequence-specific DNA binding
GIY02_02290	COG2181	nitrate reductase activity
GIY02_02295	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
GIY02_02300	COG1140	nitrate reductase beta subunit
GIY02_02305	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GIY02_02310	COG2223	nitrite transmembrane transporter activity
GIY02_02315	COG3850	Histidine kinase
GIY02_02320	COG2197	response regulator
GIY02_02325	COG4932	domain protein
GIY02_02335	COG2146	nitrite reductase [NAD(P)H] activity
GIY02_02335	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GIY02_02340	COG1116	anion transmembrane transporter activity
GIY02_02350	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GIY02_02355	COG3707	response regulator
GIY02_02360	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
GIY02_02370	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
GIY02_02375	COG3316	Transposase and inactivated derivatives
GIY02_02380	COG4572	Cation transport regulator
GIY02_02385	COG0387	Pfam Sodium calcium exchanger
GIY02_02395	COG2912	Transglutaminase-like superfamily
GIY02_02400	COG3094	Invasion gene expression up-regulator, SirB
GIY02_02405	COG2890	protein-(glutamine-N5) methyltransferase activity
GIY02_02430	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GIY02_02435	COG0659	secondary active sulfate transmembrane transporter activity
GIY02_02450	COG0012	GTP binding
GIY02_02455	COG3477	response to acidic pH
GIY02_02460	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_02465	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GIY02_02470	COG3811	Belongs to the UPF0386 family
GIY02_02475	COG3122	Protein conserved in bacteria
GIY02_02500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GIY02_02505	COG4977	sequence-specific DNA binding
GIY02_02515	COG0789	Transcriptional regulator
GIY02_02520	COG3272	Protein of unknown function (DUF1722)
GIY02_02525	COG1403	HNH endonuclease
GIY02_02535	COG0538	isocitrate dehydrogenase activity
GIY02_02540	COG1187	pseudouridine synthase activity
GIY02_02560	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GIY02_02575	COG2850	peptidyl-arginine hydroxylation
GIY02_02580	COG1943	Transposase
GIY02_02595	COG1176	ABC-type spermidine putrescine transport system, permease component I
GIY02_02600	COG1177	transmembrane transport
GIY02_02605	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
GIY02_02610	COG0318	PFAM AMP-dependent synthetase and ligase
GIY02_02620	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GIY02_02625	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GIY02_02630	COG0698	ribose 5-phosphate isomerase
GIY02_02635	COG3731	PTS system glucitol sorbitol-specific IIA component
GIY02_02655	COG3395	kinase activity
GIY02_02670	COG2390	Transcriptional regulator
GIY02_02675	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GIY02_02685	COG4591	ABC-type transport system involved in lipoprotein release permease component
GIY02_02695	COG4591	ABC-type transport system involved in lipoprotein release permease component
GIY02_02700	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GIY02_02705	COG1388	LysM domain
GIY02_02705	COG1376	ErfK ybiS ycfS ynhG family protein
GIY02_02715	COG1309	transcriptional regulator
GIY02_02725	COG3134	Outer membrane lipoprotein
GIY02_02730	COG1252	NADH dehydrogenase
GIY02_02750	COG0510	thiamine kinase activity
GIY02_02760	COG5633	Lipoprotein
GIY02_02765	COG0537	adenosine 5'-monophosphoramidase activity
GIY02_02770	COG1263	PTS System
GIY02_02770	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_02775	COG0084	hydrolase, TatD family'
GIY02_02780	COG0470	DNA polymerase III
GIY02_02790	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GIY02_02795	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GIY02_02800	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GIY02_02810	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_02815	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GIY02_02835	COG1399	metal-binding, possibly nucleic acid-binding protein
GIY02_02850	COG1530	ribonuclease E activity
GIY02_02855	COG0583	DNA-binding transcription factor activity
GIY02_02860	COG2814	Major facilitator Superfamily
GIY02_02870	COG0673	inositol 2-dehydrogenase activity
GIY02_02880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GIY02_02925	COG1560	Kdo2-lipid A biosynthetic process
GIY02_02940	COG5645	(Lipo)protein
GIY02_02980	COG3381	protein complex oligomerization
GIY02_03005	COG0583	DNA-binding transcription factor activity
GIY02_03015	COG1335	isochorismatase
GIY02_03025	COG1702	phosphate starvation-inducible protein PhoH
GIY02_03035	COG2822	iron ion transport
GIY02_03040	COG0672	)-iron permease
GIY02_03045	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GIY02_03055	COG0628	permease
GIY02_03060	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GIY02_03075	COG1309	transcriptional regulator
GIY02_03110	COG2233	PERMEase
GIY02_03120	COG3729	General stress protein
GIY02_03180	COG0531	amino acid
GIY02_03185	COG0174	glutamine synthetase
GIY02_03190	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
GIY02_03195	COG1396	sequence-specific DNA binding
GIY02_03195	COG1917	Cupin 2, conserved barrel domain protein
GIY02_03200	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_03205	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GIY02_03210	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GIY02_03215	COG0583	DNA-binding transcription factor activity
GIY02_03220	COG0473	3-isopropylmalate dehydrogenase activity
GIY02_03225	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GIY02_03230	COG4638	Rieske (2fe-2S)
GIY02_03235	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_03240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GIY02_03280	COG1191	sigma factor activity
GIY02_03295	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
GIY02_03325	COG1677	Flagellar hook-basal body complex protein FliE
GIY02_03335	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GIY02_03340	COG1317	bacterial-type flagellum organization
GIY02_03345	COG1157	protein secretion by the type III secretion system
GIY02_03350	COG2882	bacterial-type flagellum organization
GIY02_03385	COG1987	bacterial-type flagellum assembly
GIY02_03420	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GIY02_03425	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
GIY02_03430	COG1414	Transcriptional regulator
GIY02_03440	COG2814	Major facilitator Superfamily
GIY02_03475	COG1256	bacterial-type flagellum assembly
GIY02_03495	COG4786	Flagellar basal body rod
GIY02_03530	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GIY02_03535	COG1558	bacterial-type flagellum-dependent cell motility
GIY02_03540	COG1815	bacterial-type flagellum-dependent cell motility
GIY02_03550	COG2747	anti-sigma28 factor FlgM
GIY02_03555	COG3418	PFAM FlgN family protein
GIY02_03570	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GIY02_03575	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
GIY02_03580	COG0745	RESPONSE REGULATOR receiver
GIY02_03590	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GIY02_03595	COG0840	transmembrane signaling receptor activity
GIY02_03600	COG0840	transmembrane signaling receptor activity
GIY02_03605	COG0835	chemotaxis
GIY02_03610	COG0643	Histidine kinase
GIY02_03610	COG2198	Histidine kinase
GIY02_03615	COG1360	Flagellar Motor Protein
GIY02_03665	COG0583	DNA-binding transcription factor activity
GIY02_03680	COG0583	DNA-binding transcription factor activity
GIY02_03715	COG0670	Belongs to the BI1 family
GIY02_03755	COG2274	protein secretion by the type I secretion system
GIY02_03770	COG1832	CoA-binding protein
GIY02_03780	COG0210	DNA helicase
GIY02_03785	COG3304	Inner membrane component domain
GIY02_03790	COG1289	transmembrane transporter activity
GIY02_03795	COG3070	regulator of competence-specific genes
GIY02_03815	COG1067	ATP-dependent peptidase activity
GIY02_03825	COG3130	regulation of translation
GIY02_03830	COG3009	Protein conserved in bacteria
GIY02_03835	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GIY02_03835	COG3008	intermembrane lipid transfer
GIY02_03840	COG2995	paraquat-inducible protein a
GIY02_03845	COG0488	(ABC) transporter
GIY02_03855	COG3217	Mosc domain protein beta barrel domain protein
GIY02_03855	COG0633	Ferredoxin
GIY02_03870	COG0431	NADPH-dependent FMN reductase
GIY02_03875	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GIY02_03880	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_03885	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GIY02_03895	COG0308	aminopeptidase N
GIY02_03910	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
GIY02_03915	COG1448	Aminotransferase
GIY02_03920	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GIY02_03925	COG3108	Peptidase M15
GIY02_03930	COG2989	Protein conserved in bacteria
GIY02_03940	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
GIY02_03950	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GIY02_03955	COG1434	Gram-negative-bacterium-type cell wall biogenesis
GIY02_03960	COG3173	Aminoglycoside phosphotransferase
GIY02_03970	COG2835	tetraacyldisaccharide 4'-kinase activity
GIY02_03975	COG3214	Protein conserved in bacteria
GIY02_03990	COG2333	competence protein COMEC
GIY02_03990	COG0658	competence protein
GIY02_04000	COG0539	negative regulation of cytoplasmic translation
GIY02_04025	COG1944	ATP diphosphatase activity
GIY02_04030	COG2116	formate transmembrane transporter activity
GIY02_04035	COG1882	Formate acetyltransferase
GIY02_04040	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GIY02_04045	COG0477	Major facilitator Superfamily
GIY02_04050	COG3302	dmso reductase anchor subunit
GIY02_04055	COG0437	4 iron, 4 sulfur cluster binding
GIY02_04060	COG0243	molybdopterin cofactor binding
GIY02_04070	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
GIY02_04080	COG1178	ABC-type Fe3 transport system permease component
GIY02_04080	COG1674	ftsk spoiiie
GIY02_04090	COG0492	ferredoxin-NADP+ reductase activity
GIY02_04095	COG4988	ABC transporter
GIY02_04100	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GIY02_04115	COG0542	response to heat
GIY02_04125	COG1278	Cold shock
GIY02_04135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GIY02_04140	COG3593	DNA synthesis involved in DNA repair
GIY02_04145	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
GIY02_04150	COG2431	L-lysine efflux transmembrane transporter activity
GIY02_04160	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GIY02_04175	COG0028	Belongs to the TPP enzyme family
GIY02_04180	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
GIY02_04185	COG0702	epimerase
GIY02_04190	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GIY02_04195	COG3023	N-Acetylmuramoyl-L-alanine amidase
GIY02_04200	COG3706	GGDEF domain
GIY02_04200	COG2203	Gaf domain
GIY02_04200	COG5001	Diguanylate cyclase
GIY02_04200	COG4251	negative regulation of phosphorylation
GIY02_04210	COG2067	long-chain fatty acid transport protein
GIY02_04220	COG1126	abc transporter atp-binding protein
GIY02_04225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GIY02_04230	COG4215	(ABC) transporter
GIY02_04235	COG4160	amino acid transport
GIY02_04240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GIY02_04245	COG5002	protein histidine kinase activity
GIY02_04250	COG0745	RESPONSE REGULATOR receiver
GIY02_04255	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GIY02_04265	COG1177	transmembrane transport
GIY02_04270	COG1176	ABC-type spermidine putrescine transport system, permease component I
GIY02_04275	COG3842	ATPase activity
GIY02_04280	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
GIY02_04295	COG0778	Nitroreductase
GIY02_04305	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
GIY02_04330	COG0300	oxidoreductase activity
GIY02_04335	COG3226	Transcriptional regulator
GIY02_04345	COG0561	phosphatase activity
GIY02_04350	COG2814	Major facilitator Superfamily
GIY02_04360	COG0671	phosphoesterase, PA-phosphatase related
GIY02_04365	COG1349	DNA-binding transcription factor activity
GIY02_04370	COG1686	Belongs to the peptidase S11 family
GIY02_04375	COG0625	glutathione transferase activity
GIY02_04380	COG2133	pyrroloquinoline quinone binding
GIY02_04405	COG0747	negative chemotaxis
GIY02_04415	COG1446	asparaginase
GIY02_04420	COG0303	'Molybdopterin
GIY02_04425	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GIY02_04430	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GIY02_04440	COG0561	phosphatase activity
GIY02_04450	COG1609	Transcriptional regulator
GIY02_04455	COG2271	Major facilitator Superfamily
GIY02_04465	COG0488	(ABC) transporter
GIY02_04475	COG1376	ErfK ybiS ycfS ynhG family protein
GIY02_04480	COG2188	Transcriptional regulator
GIY02_04485	COG2723	6-phospho-beta-galactosidase activity
GIY02_04490	COG0667	Aldo Keto reductase
GIY02_04495	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GIY02_04500	COG1321	iron dependent repressor
GIY02_04515	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
GIY02_04530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GIY02_04535	COG0765	amino acid transport
GIY02_04540	COG1126	abc transporter atp-binding protein
GIY02_04545	COG0668	transmembrane transport
GIY02_04555	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GIY02_04565	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GIY02_04575	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GIY02_04585	COG0513	Belongs to the DEAD box helicase family
GIY02_04590	COG1309	transcriptional regulator
GIY02_04600	COG1131	(ABC) transporter
GIY02_04605	COG0842	Transport permease protein
GIY02_04610	COG0842	Transport permease protein
GIY02_04620	COG3568	Endonuclease Exonuclease Phosphatase
GIY02_04625	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GIY02_04630	COG0392	lysyltransferase activity
GIY02_04635	COG0670	Belongs to the BI1 family
GIY02_04640	COG0314	molybdopterin synthase activity
GIY02_04645	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
GIY02_04655	COG0521	Mo-molybdopterin cofactor biosynthetic process
GIY02_04675	COG0745	RESPONSE REGULATOR receiver
GIY02_04700	COG2226	methyltransferase
GIY02_04715	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GIY02_04720	COG1881	PFAM PEBP family protein
GIY02_04755	COG4677	pectinesterase activity
GIY02_04765	COG1595	DNA-templated transcription, initiation
GIY02_04790	COG0789	Transcriptional regulator
GIY02_04795	COG2200	EAL domain
GIY02_04820	COG0561	phosphatase activity
GIY02_04830	COG4149	molybdate abc transporter
GIY02_04835	COG0725	ABC transporter, periplasmic molybdate-binding protein
GIY02_04845	COG3585	molybdate ion transport
GIY02_04845	COG2005	Transcriptional regulator
GIY02_04850	COG1119	ATPase activity
GIY02_04855	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
GIY02_04860	COG1085	galactose-1-phosphate uridylyltransferase
GIY02_04870	COG2017	converts alpha-aldose to the beta-anomer
GIY02_04880	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GIY02_04890	COG1230	cation diffusion facilitator family transporter
GIY02_04900	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GIY02_04940	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
GIY02_04945	COG2885	chlorophyll binding
GIY02_04955	COG3064	Membrane
GIY02_04960	COG0848	biopolymer transport protein
GIY02_04965	COG0811	peptide transport
GIY02_04970	COG0824	Thioesterase
GIY02_04975	COG3790	cyd operon protein YbgE
GIY02_04980	COG4890	Cyd operon protein YbgT
GIY02_04985	COG1294	oxidase, subunit
GIY02_04990	COG1271	oxidase subunit
GIY02_05000	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GIY02_05010	COG0508	dehydrogenase complex catalyzes the overall conversion of
GIY02_05015	COG0567	Dehydrogenase, E1 component
GIY02_05020	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GIY02_05025	COG1053	succinate dehydrogenase
GIY02_05030	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
GIY02_05035	COG2009	succinate dehydrogenase
GIY02_05040	COG0372	Belongs to the citrate synthase family
GIY02_05070	COG1984	allophanate hydrolase subunit 2
GIY02_05075	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
GIY02_05080	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GIY02_05090	COG0415	Belongs to the DNA photolyase family
GIY02_05120	COG2205	protein histidine kinase activity
GIY02_05125	COG0745	RESPONSE REGULATOR receiver
GIY02_05130	COG0033	Phosphoglucomutase
GIY02_05140	COG0596	Alpha beta hydrolase
GIY02_05155	COG0735	belongs to the Fur family
GIY02_05160	COG0583	DNA-binding transcription factor activity
GIY02_05165	COG1053	succinate dehydrogenase
GIY02_05210	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
GIY02_05215	COG1940	carbohydrate kinase activity
GIY02_05215	COG1846	Transcriptional regulator
GIY02_05225	COG0367	asparagine synthase
GIY02_05265	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GIY02_05275	COG1702	phosphate starvation-inducible protein PhoH
GIY02_05285	COG4535	Mg2 and Co2 transporter CorC
GIY02_05300	COG0765	amino acid transport
GIY02_05305	COG0765	amino acid transport
GIY02_05310	COG1126	abc transporter atp-binding protein
GIY02_05315	COG2831	hemolysin activation secretion protein
GIY02_05325	COG2888	peptidyl-tyrosine sulfation
GIY02_05340	COG1466	dna polymerase III delta subunit
GIY02_05350	COG0406	alpha-ribazole phosphatase activity
GIY02_05355	COG0799	negative regulation of ribosome biogenesis
GIY02_05365	COG0768	penicillin binding
GIY02_05370	COG0772	Belongs to the SEDS family
GIY02_05375	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GIY02_05380	COG1686	Belongs to the peptidase S11 family
GIY02_05395	COG0583	DNA-binding transcription factor activity
GIY02_05410	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GIY02_05420	COG1278	Cold shock
GIY02_05430	COG3069	C4-dicarboxylate transmembrane transporter activity
GIY02_05435	COG3719	Belongs to the RNase T2 family
GIY02_05440	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GIY02_05445	COG0589	response to stress
GIY02_05450	COG3634	alkyl hydroperoxide reductase activity
GIY02_05455	COG0450	alkyl hydroperoxide reductase
GIY02_05460	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GIY02_05470	COG0583	DNA-binding transcription factor activity
GIY02_05475	COG3969	phosphoadenosine phosphosulfate
GIY02_05480	COG1475	DNA binding
GIY02_05485	COG0436	Aminotransferase
GIY02_05495	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
GIY02_05520	COG1172	Belongs to the binding-protein-dependent transport system permease family
GIY02_05525	COG1129	ABC transporter
GIY02_05545	COG2879	small protein
GIY02_05550	COG1966	Carbon starvation protein
GIY02_05560	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_05565	COG3433	isochorismatase activity
GIY02_05565	COG1535	isochorismatase
GIY02_05570	COG1021	2,3-dihydroxybenzoate-AMP ligase
GIY02_05580	COG4592	Periplasmic binding protein
GIY02_05595	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_05600	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_05605	COG1120	ATPase activity
GIY02_05610	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
GIY02_05610	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GIY02_05615	COG3251	PFAM MbtH domain protein
GIY02_05620	COG2382	esterase
GIY02_05625	COG4771	TonB-dependent receptor
GIY02_05630	COG3958	Transketolase
GIY02_05635	COG3959	Transketolase, thiamine diphosphate binding domain
GIY02_05640	COG2390	Transcriptional regulator
GIY02_05645	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GIY02_05650	COG1879	ABC-type sugar transport system periplasmic component
GIY02_05660	COG1129	ABC transporter
GIY02_05665	COG1172	Belongs to the binding-protein-dependent transport system permease family
GIY02_05675	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_05695	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GIY02_05725	COG3698	Phosphodiester glycosidase
GIY02_05755	COG2315	Protein conserved in bacteria
GIY02_05760	COG0778	Nitroreductase
GIY02_05780	COG0477	Major facilitator Superfamily
GIY02_05785	COG0668	transmembrane transport
GIY02_05790	COG1113	amino acid transport
GIY02_05805	COG1252	NADH dehydrogenase
GIY02_05815	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_05820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GIY02_05830	COG0531	amino acid
GIY02_05845	COG4680	protein conserved in bacteria
GIY02_05885	COG0667	Aldo Keto reductase
GIY02_05890	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GIY02_05895	COG1473	amidohydrolase
GIY02_05915	COG1566	PFAM secretion protein HlyD family protein
GIY02_05930	COG0583	DNA-binding transcription factor activity
GIY02_05940	COG0666	response to abiotic stimulus
GIY02_05950	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GIY02_05955	COG1304	FMN binding
GIY02_05960	COG0549	Belongs to the carbamate kinase family
GIY02_05965	COG0402	S-adenosylhomocysteine deaminase activity
GIY02_05975	COG3104	oligopeptide transport
GIY02_05980	COG1982	Orn Lys Arg decarboxylase major
GIY02_05985	COG0531	amino acid
GIY02_05995	COG1902	pentaerythritol trinitrate reductase activity
GIY02_06005	COG1560	Kdo2-lipid A biosynthetic process
GIY02_06070	COG0583	DNA-binding transcription factor activity
GIY02_06115	COG2501	S4 domain
GIY02_06125	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GIY02_06135	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GIY02_06140	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GIY02_06155	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
GIY02_06160	COG4181	ATPase activity
GIY02_06165	COG2755	lipolytic protein G-D-S-L family
GIY02_06170	COG0300	oxidoreductase activity
GIY02_06175	COG3118	belongs to the thioredoxin family
GIY02_06180	COG0390	transport system, permease component
GIY02_06185	COG4619	ABC transporter
GIY02_06190	COG0330	HflC and HflK could
GIY02_06195	COG1585	Membrane protein implicated in regulation of membrane protease activity
GIY02_06210	COG3735	TraB family
GIY02_06215	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GIY02_06225	COG2223	nitrite transmembrane transporter activity
GIY02_06230	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GIY02_06230	COG4651	solute:proton antiporter activity
GIY02_06235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GIY02_06275	COG2832	Protein of unknown function (DUF454)
GIY02_06280	COG3923	Primosomal replication protein n
GIY02_06290	COG1196	nuclear chromosome segregation
GIY02_06290	COG3264	Mechanosensitive ion channel
GIY02_06295	COG1309	transcriptional regulator
GIY02_06300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GIY02_06305	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GIY02_06320	COG0110	maltose O-acetyltransferase activity
GIY02_06340	COG0257	Belongs to the bacterial ribosomal protein bL36 family
GIY02_06350	COG4943	cyclic-guanylate-specific phosphodiesterase activity
GIY02_06355	COG5507	3-demethylubiquinone-9 3-methyltransferase
GIY02_06360	COG2364	Membrane
GIY02_06390	COG3695	enzyme binding
GIY02_06395	COG3126	Type III secretion system lipoprotein chaperone (YscW)
GIY02_06400	COG1946	Acyl-CoA thioesterase
GIY02_06405	COG0583	DNA-binding transcription factor activity
GIY02_06410	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
GIY02_06415	COG0004	ammonium transporteR
GIY02_06420	COG0347	Belongs to the P(II) protein family
GIY02_06425	COG1132	(ABC) transporter
GIY02_06430	COG1132	(ABC) transporter
GIY02_06435	COG1522	sequence-specific DNA binding
GIY02_06450	COG4533	DNA binding
GIY02_06460	COG0824	Thioesterase
GIY02_06465	COG1555	photosystem II stabilization
GIY02_06475	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GIY02_06480	COG0776	regulation of translation
GIY02_06485	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GIY02_06510	COG0271	Belongs to the BolA IbaG family
GIY02_06520	COG3056	Lipoprotein
GIY02_06550	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GIY02_06555	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GIY02_06560	COG1845	cytochrome c oxidase, subunit III
GIY02_06565	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GIY02_06580	COG2814	Major facilitator Superfamily
GIY02_06620	COG1136	(ABC) transporter
GIY02_06635	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GIY02_06650	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GIY02_06655	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_06660	COG0736	holo-[acyl-carrier-protein] synthase activity
GIY02_06680	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GIY02_06705	COG0142	geranyltranstransferase activity
GIY02_06715	COG0667	Aldo Keto reductase
GIY02_06720	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GIY02_06725	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
GIY02_06740	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GIY02_06740	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GIY02_06750	COG4238	major outer membrane lipoprotein
GIY02_06755	COG3248	Nucleoside-binding outer membrane protein
GIY02_06770	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GIY02_06780	COG1862	Preprotein translocase
GIY02_06800	COG0450	alkyl hydroperoxide reductase
GIY02_06805	COG1574	metal-dependent hydrolase with the TIM-barrel fold
GIY02_06815	COG1335	isochorismatase
GIY02_06820	COG0583	DNA-binding transcription factor activity
GIY02_06825	COG0366	Alpha amylase catalytic
GIY02_06835	COG1114	Component of the transport system for branched-chain amino acids
GIY02_06850	COG0420	3'-5' exonuclease activity
GIY02_06855	COG0419	ATPase involved in DNA repair
GIY02_06860	COG1940	carbohydrate kinase activity
GIY02_06875	COG4126	flavin adenine dinucleotide binding
GIY02_06885	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GIY02_06890	COG3416	Protein conserved in bacteria
GIY02_06900	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GIY02_06925	COG1181	Belongs to the D-alanine--D-alanine ligase family
GIY02_06945	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
GIY02_06955	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GIY02_06960	COG0113	porphobilinogen synthase activity
GIY02_06965	COG1943	Transposase
GIY02_06980	COG2175	clavaminate synthase activity
GIY02_06985	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GIY02_06990	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
GIY02_06995	COG4521	taurine ABC transporter
GIY02_07000	COG2040	homocysteine
GIY02_07005	COG0833	amino acid
GIY02_07015	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GIY02_07025	COG0765	amino acid transport
GIY02_07030	COG0765	amino acid transport
GIY02_07035	COG0583	DNA-binding transcription factor activity
GIY02_07040	COG2271	Major facilitator Superfamily
GIY02_07060	COG3188	usher protein
GIY02_07085	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
GIY02_07095	COG3639	organic phosphonate transmembrane transporter activity
GIY02_07185	COG3121	Chaperone
GIY02_07210	COG0579	oxidoreductase
GIY02_07215	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_07220	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GIY02_07225	COG1113	amino acid transport
GIY02_07230	COG1802	Transcriptional regulator
GIY02_07245	COG0583	DNA-binding transcription factor activity
GIY02_07255	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_07270	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GIY02_07280	COG1596	polysaccharide export
GIY02_07300	COG0463	Glycosyl transferase, family 2
GIY02_07305	COG0438	transferase activity, transferring glycosyl groups
GIY02_07310	COG0438	transferase activity, transferring glycosyl groups
GIY02_07310	COG0297	glycogen (starch) synthase activity
GIY02_07325	COG1045	serine acetyltransferase
GIY02_07345	COG2195	Cleaves the N-terminal amino acid of tripeptides
GIY02_07350	COG0454	-acetyltransferase
GIY02_07365	COG2991	Protein conserved in bacteria
GIY02_07380	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
GIY02_07385	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
GIY02_07400	COG3034	peptidoglycan biosynthetic process
GIY02_07405	COG0121	glutamine amidotransferase
GIY02_07415	COG1960	acyl-CoA dehydrogenase activity
GIY02_07420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GIY02_07430	COG0583	DNA-binding transcription factor activity
GIY02_07440	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GIY02_07450	COG2226	methyltransferase
GIY02_07460	COG0741	lytic transglycosylase activity
GIY02_07460	COG1388	LysM domain
GIY02_07465	COG2226	methyltransferase
GIY02_07475	COG2814	Major facilitator Superfamily
GIY02_07480	COG0583	DNA-binding transcription factor activity
GIY02_07485	COG0656	L-ascorbic acid biosynthetic process
GIY02_07520	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
GIY02_07530	COG2011	ABC-type metal ion transport system permease component
GIY02_07535	COG1464	Belongs to the NlpA lipoprotein family
GIY02_07545	COG1720	tRNA m6t6A37 methyltransferase activity
GIY02_07555	COG3015	lipoprotein NlpE involved in copper resistance
GIY02_07560	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GIY02_07565	COG4681	YaeQ
GIY02_07575	COG4568	rho-dependent transcription termination
GIY02_07580	COG0037	tRNA processing
GIY02_07585	COG0346	lactoylglutathione lyase activity
GIY02_07645	COG0750	zinc metalloprotease
GIY02_07650	COG0575	Belongs to the CDS family
GIY02_07660	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GIY02_07685	COG0024	Methionine aminopeptidase
GIY02_07690	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
GIY02_07710	COG3835	regulator
GIY02_07730	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GIY02_07735	COG2860	membrane
GIY02_07755	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_07760	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GIY02_07765	COG1120	ATPase activity
GIY02_07770	COG4774	siderophore transport
GIY02_07775	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GIY02_07785	COG1643	Atp-dependent helicase
GIY02_07790	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
GIY02_07800	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GIY02_07815	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GIY02_07830	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
GIY02_07835	COG0726	polysaccharide deacetylase
GIY02_07840	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_07845	COG0842	Transport permease protein
GIY02_07850	COG1131	(ABC) transporter
GIY02_07855	COG0288	reversible hydration of carbon dioxide
GIY02_07865	COG4993	Dehydrogenase
GIY02_07870	COG2132	Multicopper oxidase
GIY02_07885	COG0545	Peptidyl-prolyl cis-trans isomerase
GIY02_07905	COG1049	propionate catabolic process, 2-methylcitrate cycle
GIY02_07910	COG3064	Membrane
GIY02_07925	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GIY02_07930	COG0508	dehydrogenase complex catalyzes the overall conversion of
GIY02_07935	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
GIY02_07940	COG2186	Transcriptional regulator
GIY02_07945	COG1113	amino acid transport
GIY02_07950	COG2211	Major facilitator Superfamily
GIY02_07955	COG3940	Belongs to the glycosyl hydrolase 43 family
GIY02_07960	COG3725	Membrane protein required for beta-lactamase induction
GIY02_07975	COG4969	Belongs to the N-Me-Phe pilin family
GIY02_07980	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GIY02_07985	COG1459	type II secretion system
GIY02_07995	COG0237	dephospho-CoA kinase activity
GIY02_08010	COG0494	nUDIX hydrolase
GIY02_08030	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GIY02_08035	COG0849	cell division
GIY02_08045	COG1181	Belongs to the D-alanine--D-alanine ligase family
GIY02_08060	COG0772	Belongs to the SEDS family
GIY02_08075	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GIY02_08080	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GIY02_08085	COG0768	penicillin binding
GIY02_08105	COG1609	Transcriptional regulator
GIY02_08165	COG0738	Major facilitator superfamily
GIY02_08175	COG0583	DNA-binding transcription factor activity
GIY02_08180	COG2271	Major facilitator Superfamily
GIY02_08185	COG2814	Major facilitator Superfamily
GIY02_08200	COG4143	(ABC) transporter
GIY02_08205	COG1178	ABC-type Fe3 transport system permease component
GIY02_08215	COG0586	Pfam SNARE associated Golgi protein
GIY02_08235	COG0235	Class ii aldolase
GIY02_08240	COG0417	DNA replication proofreading
GIY02_08250	COG0564	pseudouridine synthase activity
GIY02_08260	COG3493	citrate carrier protein
GIY02_08275	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
GIY02_08280	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
GIY02_08290	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
GIY02_08340	COG0505	Belongs to the CarA family
GIY02_08405	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GIY02_08415	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GIY02_08425	COG0471	metal ion transport
GIY02_08430	COG2828	Protein conserved in bacteria
GIY02_08440	COG0583	DNA-binding transcription factor activity
GIY02_08455	COG1047	Peptidyl-prolyl cis-trans
GIY02_08460	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GIY02_08470	COG0196	riboflavin kinase activity
GIY02_08485	COG0583	DNA-binding transcription factor activity
GIY02_08505	COG3121	Chaperone
GIY02_08510	COG3539	Fimbrial protein
GIY02_08525	COG3188	usher protein
GIY02_08535	COG3539	Fimbrial protein
GIY02_08540	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GIY02_08575	COG0583	DNA-binding transcription factor activity
GIY02_08590	COG1584	GPR1 FUN34 yaaH family protein
GIY02_08595	COG0477	Major facilitator Superfamily
GIY02_08600	COG0521	Mo-molybdopterin cofactor biosynthetic process
GIY02_08610	COG1115	amino acid carrier protein
GIY02_08620	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
GIY02_08630	COG0527	aspartate kinase activity
GIY02_08630	COG0460	homoserine dehydrogenase
GIY02_08640	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
GIY02_08650	COG0745	RESPONSE REGULATOR receiver
GIY02_08655	COG4452	Inner membrane protein CreD
GIY02_08660	COG2205	protein histidine kinase activity
GIY02_08665	COG0745	RESPONSE REGULATOR receiver
GIY02_08670	COG3045	CreA protein
GIY02_08675	COG2207	Transcriptional regulator
GIY02_08675	COG3708	Transcriptional regulator
GIY02_08695	COG0741	lytic transglycosylase activity
GIY02_08700	COG0488	(ABC) transporter
GIY02_08710	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GIY02_08715	COG0560	Phosphoserine phosphatase
GIY02_08750	COG0084	hydrolase, TatD family'
GIY02_08755	COG4667	esterase of the alpha-beta hydrolase superfamily
GIY02_08760	COG5487	UPF0391 membrane protein
GIY02_08765	COG2823	Periplasmic or secreted lipoprotein
GIY02_08775	COG1011	Hydrolase
GIY02_08780	COG0456	acetyltransferase
GIY02_08785	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
GIY02_08815	COG3706	GGDEF domain
GIY02_08820	COG4114	ferric iron reductase
GIY02_08825	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_08830	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GIY02_08835	COG2197	response regulator
GIY02_08840	COG2197	response regulator
GIY02_08855	COG2966	Psort location CytoplasmicMembrane, score
GIY02_08870	COG1484	DNA-dependent DNA replication
GIY02_08895	COG1737	Transcriptional regulator
GIY02_08895	COG0837	glucose binding
GIY02_08900	COG0800	Aldolase
GIY02_08905	COG3734	2-keto-3-deoxy-galactonokinase
GIY02_08920	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
GIY02_08935	COG0531	amino acid
GIY02_08940	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_08945	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GIY02_08960	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GIY02_08960	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GIY02_08980	COG0179	Fumarylacetoacetate (FAA) hydrolase
GIY02_08990	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_08995	COG3384	dioxygenase
GIY02_09005	COG3971	2-oxopent-4-enoate hydratase activity
GIY02_09025	COG2368	4-hydroxyphenylacetate
GIY02_09030	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GIY02_09040	COG3210	domain, Protein
GIY02_09045	COG3210	domain, Protein
GIY02_09075	COG2831	hemolysin activation secretion protein
GIY02_09085	COG2879	small protein
GIY02_09090	COG0523	cobalamin synthesis protein
GIY02_09095	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_09100	COG2733	membrane
GIY02_09105	COG2814	Major facilitator Superfamily
GIY02_09115	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
GIY02_09120	COG1924	4 iron, 4 sulfur cluster binding
GIY02_09130	COG1473	amidohydrolase
GIY02_09135	COG0700	Nucleoside recognition
GIY02_09140	COG3366	ferrous iron transmembrane transporter activity
GIY02_09155	COG1566	PFAM secretion protein HlyD family protein
GIY02_09165	COG5457	Domain of unknown function (DUF1127)
GIY02_09170	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GIY02_09180	COG0531	amino acid
GIY02_09200	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_09200	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_09205	COG3715	PTS system
GIY02_09210	COG3716	PTS system mannose fructose sorbose family IID component
GIY02_09240	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
GIY02_09245	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
GIY02_09250	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
GIY02_09255	COG1454	alcohol dehydrogenase
GIY02_09255	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_09270	COG1882	Formate acetyltransferase
GIY02_09275	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GIY02_09280	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
GIY02_09285	COG4869	propanediol catabolic process
GIY02_09310	COG3706	GGDEF domain
GIY02_09315	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GIY02_09320	COG1129	ABC transporter
GIY02_09320	COG0842	Transport permease protein
GIY02_09325	COG0842	Transport permease protein
GIY02_09360	COG2850	peptidyl-arginine hydroxylation
GIY02_09365	COG5002	protein histidine kinase activity
GIY02_09370	COG0745	RESPONSE REGULATOR receiver
GIY02_09375	COG1538	Outer membrane efflux protein
GIY02_09380	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GIY02_09385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GIY02_09390	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GIY02_09515	COG4974	Belongs to the 'phage' integrase family
GIY02_09535	COG0582	viral genome integration into host DNA
GIY02_09545	COG0288	reversible hydration of carbon dioxide
GIY02_09550	COG0659	secondary active sulfate transmembrane transporter activity
GIY02_09555	COG1064	alcohol dehydrogenase
GIY02_09565	COG0395	ABC-type sugar transport system, permease component
GIY02_09570	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GIY02_09575	COG3842	ATPase activity
GIY02_09585	COG2814	Major facilitator Superfamily
GIY02_09595	COG1082	Xylose isomerase domain protein TIM barrel
GIY02_09605	COG3962	Belongs to the TPP enzyme family
GIY02_09615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GIY02_09620	COG1737	Transcriptional regulator
GIY02_09620	COG0837	glucose binding
GIY02_09625	COG3718	enzyme involved in inositol metabolism
GIY02_09640	COG0433	COG0433 Predicted ATPase
GIY02_09645	COG0795	lipopolysaccharide-transporting ATPase activity
GIY02_09650	COG0795	lipopolysaccharide-transporting ATPase activity
GIY02_09660	COG2927	DNA polymerase III (CHI subunit)
GIY02_09665	COG0525	valine-tRNA ligase activity
GIY02_09680	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
GIY02_09685	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GIY02_09690	COG2731	YhcH YjgK YiaL family protein
GIY02_09710	COG0251	oxidation-reduction process
GIY02_09715	COG3525	Glycosyl hydrolase, family 20, catalytic domain
GIY02_09730	COG1263	PTS System
GIY02_09730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_09735	COG0366	Alpha amylase catalytic
GIY02_09740	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_09745	COG1486	melibiose metabolic process
GIY02_09765	COG0602	queuosine metabolic process
GIY02_09770	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_09770	COG3711	transcriptional antiterminator
GIY02_09775	COG2706	6-phosphogluconolactonase activity
GIY02_09790	COG3964	amidohydrolase
GIY02_09820	COG3783	Cytochrome b(562)
GIY02_09825	COG0312	modulator of DNA gyrase
GIY02_09840	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GIY02_09850	COG1172	Belongs to the binding-protein-dependent transport system permease family
GIY02_09855	COG1172	Belongs to the binding-protein-dependent transport system permease family
GIY02_09860	COG1129	ABC transporter
GIY02_09865	COG1879	ABC-type sugar transport system periplasmic component
GIY02_09870	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GIY02_09875	COG2105	PFAM AIG2 family protein
GIY02_09880	COG2911	Protein conserved in bacteria
GIY02_09885	COG0729	surface antigen
GIY02_09895	COG1253	flavin adenine dinucleotide binding
GIY02_09905	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
GIY02_09920	COG1733	regulation of RNA biosynthetic process
GIY02_09925	COG0702	epimerase
GIY02_09935	COG0697	spore germination
GIY02_09945	COG1113	amino acid transport
GIY02_09950	COG0545	Peptidyl-prolyl cis-trans isomerase
GIY02_09955	COG3061	Opacity-associated protein A
GIY02_09965	COG0359	binds to the 23S rRNA
GIY02_09975	COG2965	DNA replication, synthesis of RNA primer
GIY02_10015	COG3414	Phosphotransferase system galactitol-specific IIB component
GIY02_10035	COG1073	alpha beta
GIY02_10040	COG3650	response to hydrogen peroxide
GIY02_10050	COG1960	acyl-CoA dehydrogenase activity
GIY02_10055	COG0477	Major facilitator Superfamily
GIY02_10060	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GIY02_10065	COG0557	exoribonuclease II activity
GIY02_10080	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
GIY02_10090	COG0330	HflC and HflK could
GIY02_10095	COG0330	HflC and HflK could
GIY02_10100	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GIY02_10120	COG0860	N-Acetylmuramoyl-L-alanine amidase
GIY02_10125	COG0802	atpase or kinase
GIY02_10130	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GIY02_10130	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
GIY02_10135	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GIY02_10155	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GIY02_10160	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
GIY02_10175	COG1511	domain protein
GIY02_10175	COG3264	Mechanosensitive ion channel
GIY02_10180	COG0531	amino acid
GIY02_10195	COG1053	succinate dehydrogenase
GIY02_10200	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GIY02_10220	COG2076	Multidrug Resistance protein
GIY02_10225	COG5510	response to toxic substance
GIY02_10240	COG1509	lysine 2,3-aminomutase activity
GIY02_10255	COG3121	Chaperone
GIY02_10285	COG0459	protein refolding
GIY02_10295	COG0531	amino acid
GIY02_10300	COG3030	protein affecting phage T7 exclusion by the F plasmid
GIY02_10305	COG1027	Aspartate ammonia-lyase
GIY02_10310	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
GIY02_10325	COG1309	transcriptional regulator
GIY02_10370	COG0457	Tetratricopeptide repeat
GIY02_10375	COG0726	polysaccharide deacetylase
GIY02_10375	COG1649	PFAM Uncharacterised BCR, COG1649
GIY02_10380	COG1215	transferase activity, transferring glycosyl groups
GIY02_10395	COG0861	Integral membrane protein TerC family
GIY02_10430	COG1486	melibiose metabolic process
GIY02_10435	COG2169	Transcriptional regulator
GIY02_10450	COG2824	Alkylphosphonate utilization operon protein PhnA
GIY02_10455	COG2764	glyoxalase bleomycin resistance protein dioxygenase
GIY02_10460	COG2188	Transcriptional regulator
GIY02_10465	COG3624	Phosphonate C-P lyase system protein PhnG
GIY02_10470	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
GIY02_10475	COG3626	phosphonate metabolism
GIY02_10480	COG3627	carbon phosphorus lyase activity
GIY02_10485	COG4107	phosphonate C-P lyase system protein PhnK
GIY02_10490	COG4778	phosphonate C-P lyase system protein PhnL
GIY02_10495	COG3454	Phosphonate metabolism
GIY02_10505	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
GIY02_10515	COG4191	Histidine kinase
GIY02_10515	COG0784	Response regulator, receiver
GIY02_10520	COG1129	ABC transporter
GIY02_10525	COG1172	Belongs to the binding-protein-dependent transport system permease family
GIY02_10530	COG1879	ABC-type sugar transport system periplasmic component
GIY02_10550	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
GIY02_10555	COG1301	dicarboxylic acid transport
GIY02_10560	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GIY02_10565	COG3162	membrane
GIY02_10575	COG3539	Fimbrial protein
GIY02_10580	COG3539	Fimbrial protein
GIY02_10595	COG3539	Fimbrial protein
GIY02_10600	COG1346	cytolysis
GIY02_10610	COG0583	DNA-binding transcription factor activity
GIY02_10615	COG0025	NhaP-type Na H and K H
GIY02_10620	COG2252	PERMEase
GIY02_10625	COG0625	glutathione transferase activity
GIY02_10630	COG0789	Transcriptional regulator
GIY02_10655	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
GIY02_10685	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GIY02_10700	COG2315	Protein conserved in bacteria
GIY02_10705	COG0432	Pfam Uncharacterised protein family UPF0047
GIY02_10715	COG1448	Aminotransferase
GIY02_10720	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GIY02_10725	COG0305	Participates in initiation and elongation during chromosome replication
GIY02_10740	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GIY02_10750	COG0735	belongs to the Fur family
GIY02_10755	COG3237	CsbD-like
GIY02_10760	COG0534	Mate efflux family protein
GIY02_10770	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
GIY02_10795	COG4580	involved in the transport of maltose and maltodextrins
GIY02_10840	COG0251	oxidation-reduction process
GIY02_10845	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GIY02_10855	COG0527	aspartate kinase activity
GIY02_10880	COG1187	pseudouridine synthase activity
GIY02_10895	COG1283	sodium-dependent phosphate transmembrane transporter activity
GIY02_10900	COG1410	methionine synthase
GIY02_10900	COG0646	methionine synthase
GIY02_10920	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
GIY02_10960	COG0151	Belongs to the GarS family
GIY02_10970	COG4191	Histidine kinase
GIY02_10985	COG0776	regulation of translation
GIY02_10990	COG3068	Protein conserved in bacteria
GIY02_11010	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
GIY02_11025	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GIY02_11030	COG2104	thiamine diphosphate biosynthetic process
GIY02_11045	COG3706	GGDEF domain
GIY02_11055	COG1447	Phosphotransferase system cellobiose-specific component IIA
GIY02_11060	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
GIY02_11095	COG0250	Participates in transcription elongation, termination and antitermination
GIY02_11100	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GIY02_11200	COG0583	DNA-binding transcription factor activity
GIY02_11215	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GIY02_11230	COG3443	Belongs to the bacterial solute-binding protein 9 family
GIY02_11235	COG2207	Transcriptional regulator
GIY02_11245	COG0371	Dehydrogenase
GIY02_11250	COG0697	spore germination
GIY02_11260	COG0527	aspartate kinase activity
GIY02_11260	COG0460	homoserine dehydrogenase
GIY02_11265	COG0626	cystathionine gamma-synthase activity
GIY02_11280	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GIY02_11285	COG1609	Transcriptional regulator
GIY02_11290	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GIY02_11305	COG1575	Belongs to the MenA family. Type 1 subfamily
GIY02_11325	COG3678	ATP-independent chaperone mediated protein folding
GIY02_11330	COG0745	RESPONSE REGULATOR receiver
GIY02_11335	COG2205	protein histidine kinase activity
GIY02_11340	COG2258	MOSC domain
GIY02_11345	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GIY02_11385	COG1454	alcohol dehydrogenase
GIY02_11400	COG2731	YhcH YjgK YiaL family protein
GIY02_11405	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GIY02_11410	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GIY02_11420	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
GIY02_11445	COG0437	4 iron, 4 sulfur cluster binding
GIY02_11450	COG2864	formate dehydrogenase
GIY02_11460	COG0657	acetylesterase activity
GIY02_11465	COG0456	acetyltransferase
GIY02_11480	COG1011	Hydrolase
GIY02_11490	COG0174	glutamine synthetase
GIY02_11495	COG3852	Histidine kinase
GIY02_11505	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GIY02_11540	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GIY02_11545	COG3084	Protein conserved in bacteria
GIY02_11555	COG1763	Mo-molybdopterin cofactor biosynthetic process
GIY02_11580	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
GIY02_11630	COG0805	protein transport
GIY02_11640	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GIY02_11650	COG3165	ubiquinone biosynthetic process from chorismate
GIY02_11660	COG1322	Protein conserved in bacteria
GIY02_11680	COG0583	DNA-binding transcription factor activity
GIY02_11690	COG0561	phosphatase activity
GIY02_11695	COG2267	carboxylic ester hydrolase activity
GIY02_11700	COG1280	lysine exporter protein (LysE YggA)
GIY02_11710	COG1280	lysine exporter protein (LysE YggA)
GIY02_11725	COG2050	protein possibly involved in aromatic compounds catabolism
GIY02_11740	COG0210	DNA helicase
GIY02_11745	COG1011	Hydrolase
GIY02_11765	COG5567	small periplasmic lipoprotein
GIY02_11775	COG3072	Adenylate cyclase
GIY02_11785	COG1587	Uroporphyrinogen-III synthase
GIY02_11790	COG2959	enzyme of heme biosynthesis
GIY02_11795	COG3071	HemY protein
GIY02_11825	COG1113	amino acid transport
GIY02_11845	COG2244	polysaccharide biosynthetic process
GIY02_11850	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GIY02_11855	COG0456	acetyltransferase
GIY02_11860	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
GIY02_11865	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
GIY02_11875	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GIY02_11880	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GIY02_11885	COG3118	belongs to the thioredoxin family
GIY02_11900	COG0583	DNA-binding transcription factor activity
GIY02_11910	COG1811	Na channel or pump
GIY02_11920	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GIY02_11935	COG0583	DNA-binding transcription factor activity
GIY02_11940	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GIY02_11950	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GIY02_11955	COG3978	acetolactate synthase activity
GIY02_11970	COG0606	chelatase, subunit chli
GIY02_11975	COG3085	chromosome segregation
GIY02_12020	COG2186	Transcriptional regulator
GIY02_12025	COG0477	Major facilitator Superfamily
GIY02_12030	COG1609	Transcriptional regulator
GIY02_12035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GIY02_12040	COG1879	ABC-type sugar transport system periplasmic component
GIY02_12045	COG1172	Belongs to the binding-protein-dependent transport system permease family
GIY02_12080	COG1522	sequence-specific DNA binding
GIY02_12085	COG0716	FMN binding
GIY02_12100	COG3312	ion transport
GIY02_12135	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GIY02_12140	COG0355	proton-transporting ATP synthase activity, rotational mechanism
GIY02_12150	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
GIY02_12160	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GIY02_12165	COG0573	inorganic phosphate transmembrane transporter activity
GIY02_12170	COG0581	inorganic phosphate transmembrane transporter activity
GIY02_12180	COG0704	Plays a role in the regulation of phosphate uptake
GIY02_12195	COG2382	esterase
GIY02_12205	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GIY02_12210	COG2252	PERMEase
GIY02_12215	COG0431	NADPH-dependent FMN reductase
GIY02_12220	COG2091	lysine biosynthetic process via aminoadipic acid
GIY02_12250	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
GIY02_12260	COG0230	Belongs to the bacterial ribosomal protein bL34 family
GIY02_12270	COG0592	DNA-directed DNA polymerase activity
GIY02_12280	COG0187	DNA topoisomerase II activity
GIY02_12285	COG0561	phosphatase activity
GIY02_12300	COG2186	Transcriptional regulator
GIY02_12305	COG3734	2-keto-3-deoxy-galactonokinase
GIY02_12310	COG0800	Aldolase
GIY02_12320	COG2271	Major facilitator Superfamily
GIY02_12325	COG0823	Involved in the tonB-independent uptake of proteins
GIY02_12330	COG5645	(Lipo)protein
GIY02_12350	COG2188	Transcriptional regulator
GIY02_12365	COG2149	membrane
GIY02_12385	COG2610	gluconate transmembrane transporter activity
GIY02_12390	COG0583	DNA-binding transcription factor activity
GIY02_12395	COG2814	Major facilitator Superfamily
GIY02_12420	COG0028	Belongs to the TPP enzyme family
GIY02_12425	COG0440	acetolactate synthase activity
GIY02_12430	COG2197	response regulator
GIY02_12440	COG2271	Major facilitator Superfamily
GIY02_12480	COG2188	Transcriptional regulator
GIY02_12510	COG4580	involved in the transport of maltose and maltodextrins
GIY02_12515	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_12515	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_12525	COG1609	Transcriptional regulator
GIY02_12540	COG0697	spore germination
GIY02_12545	COG1943	Transposase
GIY02_12600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GIY02_12605	COG1538	Outer membrane efflux protein
GIY02_12615	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_12615	COG1263	PTS System
GIY02_12620	COG1464	Belongs to the NlpA lipoprotein family
GIY02_12630	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
GIY02_12640	COG1064	alcohol dehydrogenase
GIY02_12645	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GIY02_12685	COG2211	Major facilitator Superfamily
GIY02_12690	COG1501	Belongs to the glycosyl hydrolase 31 family
GIY02_12695	COG3711	transcriptional antiterminator
GIY02_12700	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_12700	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_12700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_12705	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_12710	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_12710	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_12720	COG0191	fructose-bisphosphate aldolase activity
GIY02_12725	COG1940	carbohydrate kinase activity
GIY02_12740	COG1486	melibiose metabolic process
GIY02_12745	COG1263	PTS System
GIY02_12745	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_12750	COG2982	Protein involved in outer membrane biogenesis
GIY02_12755	COG2233	PERMEase
GIY02_12760	COG0786	glutamate:sodium symporter activity
GIY02_12775	COG3074	FtsZ-dependent cytokinesis
GIY02_12780	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
GIY02_12805	COG3152	Membrane
GIY02_12815	COG1494	fructose-1,6-bisphosphatase
GIY02_12820	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GIY02_12825	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GIY02_12830	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GIY02_12850	COG2860	membrane
GIY02_12855	COG1561	YicC-like family, N-terminal region
GIY02_12880	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GIY02_12890	COG0227	Belongs to the bacterial ribosomal protein bL28 family
GIY02_12915	COG1519	Transferase
GIY02_12920	COG1216	Glycosyl transferase, family 2
GIY02_12935	COG0859	PFAM glycosyl transferase family 9
GIY02_12960	COG0859	PFAM glycosyl transferase family 9
GIY02_12975	COG0156	8-amino-7-oxononanoate synthase activity
GIY02_12990	COG0463	Glycosyl transferase, family 2
GIY02_12995	COG2861	carbohydrate metabolic process
GIY02_13000	COG4942	peptidase
GIY02_13010	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GIY02_13015	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
GIY02_13035	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
GIY02_13045	COG2186	Transcriptional regulator
GIY02_13065	COG3722	fumarate hydratase activity
GIY02_13085	COG1566	PFAM secretion protein HlyD family protein
GIY02_13090	COG0625	glutathione transferase activity
GIY02_13100	COG3276	selenocysteine insertion sequence binding
GIY02_13105	COG1454	alcohol dehydrogenase
GIY02_13110	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
GIY02_13120	COG0366	Alpha amylase catalytic
GIY02_13125	COG2992	FlgJ-related protein
GIY02_13130	COG1609	Transcriptional regulator
GIY02_13130	COG2207	Transcriptional regulator
GIY02_13135	COG4214	carbohydrate transport
GIY02_13140	COG1129	ABC transporter
GIY02_13145	COG4213	ABC transporter substrate-binding protein
GIY02_13155	COG1070	Carbohydrate kinase
GIY02_13160	COG4682	membrane
GIY02_13165	COG3274	enterobacterial common antigen metabolic process
GIY02_13190	COG1278	Cold shock
GIY02_13195	COG2944	sequence-specific DNA binding
GIY02_13200	COG2814	Major facilitator Superfamily
GIY02_13220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GIY02_13230	COG1609	Transcriptional regulator
GIY02_13235	COG2885	chlorophyll binding
GIY02_13240	COG0243	molybdopterin cofactor binding
GIY02_13245	COG0456	acetyltransferase
GIY02_13250	COG2818	Glycosylase
GIY02_13255	COG5571	outer membrane autotransporter
GIY02_13260	COG2223	nitrite transmembrane transporter activity
GIY02_13280	COG0747	negative chemotaxis
GIY02_13285	COG0601	transmembrane transport
GIY02_13290	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GIY02_13295	COG0444	Belongs to the ABC transporter superfamily
GIY02_13300	COG4608	Belongs to the ABC transporter superfamily
GIY02_13315	COG2194	sulfuric ester hydrolase activity
GIY02_13345	COG1215	transferase activity, transferring glycosyl groups
GIY02_13350	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
GIY02_13355	COG3118	belongs to the thioredoxin family
GIY02_13355	COG0457	Tetratricopeptide repeat
GIY02_13360	COG2199	diguanylate cyclase activity
GIY02_13360	COG2200	EAL domain
GIY02_13370	COG0612	Peptidase, M16
GIY02_13380	COG2982	Protein involved in outer membrane biogenesis
GIY02_13385	COG0477	Major facilitator Superfamily
GIY02_13390	COG1295	ribonuclease BN
GIY02_13395	COG0583	DNA-binding transcription factor activity
GIY02_13400	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_13405	COG2197	response regulator
GIY02_13415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GIY02_13425	COG1454	alcohol dehydrogenase
GIY02_13430	COG0625	glutathione transferase activity
GIY02_13435	COG1609	Transcriptional regulator
GIY02_13445	COG2610	gluconate transmembrane transporter activity
GIY02_13455	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GIY02_13460	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
GIY02_13480	COG0589	response to stress
GIY02_13490	COG0306	phosphate transporter
GIY02_13495	COG2081	HI0933 family
GIY02_13500	COG2239	Acts as a magnesium transporter
GIY02_13525	COG0444	Belongs to the ABC transporter superfamily
GIY02_13530	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GIY02_13535	COG0601	transmembrane transport
GIY02_13540	COG0747	negative chemotaxis
GIY02_13550	COG3479	Phenolic acid decarboxylase
GIY02_13590	COG2091	lysine biosynthetic process via aminoadipic acid
GIY02_13595	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GIY02_13600	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_13605	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GIY02_13610	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GIY02_13645	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
GIY02_13645	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GIY02_13655	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GIY02_13675	COG0477	Major facilitator Superfamily
GIY02_13685	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
GIY02_13700	COG3714	YhhN family
GIY02_13710	COG3776	membrane
GIY02_13715	COG0742	ribosomal rna small subunit methyltransferase
GIY02_13720	COG0552	protein localization to endoplasmic reticulum
GIY02_13725	COG2884	Cell division ATP-binding protein ftsE
GIY02_13730	COG2177	Part of the ABC transporter FtsEX involved in
GIY02_13740	COG0683	leucine binding
GIY02_13745	COG0456	acetyltransferase
GIY02_13755	COG0683	leucine binding
GIY02_13760	COG0559	Belongs to the binding-protein-dependent transport system permease family
GIY02_13770	COG0411	ABC transporter
GIY02_13775	COG0410	ABC transporter
GIY02_13790	COG1653	transport
GIY02_13810	COG0584	glycerophosphoryl diester phosphodiesterase
GIY02_13820	COG0405	Gamma-glutamyltransferase
GIY02_13825	COG1247	-acetyltransferase
GIY02_13835	COG0673	inositol 2-dehydrogenase activity
GIY02_13840	COG1741	Belongs to the pirin family
GIY02_13845	COG1609	Transcriptional regulator
GIY02_13855	COG2610	gluconate transmembrane transporter activity
GIY02_13860	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GIY02_13885	COG0058	SHG alpha-glucan phosphorylase activity
GIY02_13890	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GIY02_13905	COG1349	DNA-binding transcription factor activity
GIY02_13915	COG0058	SHG alpha-glucan phosphorylase activity
GIY02_13920	COG1640	4-alpha-glucanotransferase
GIY02_13925	COG2610	gluconate transmembrane transporter activity
GIY02_13935	COG1040	competence protein
GIY02_13960	COG1918	ferrous iron import across plasma membrane
GIY02_13965	COG2183	response to ionizing radiation
GIY02_13970	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GIY02_13980	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_13985	COG0179	Fumarylacetoacetate (FAA) hydrolase
GIY02_13990	COG4948	Mandelate Racemase Muconate Lactonizing
GIY02_14005	COG3254	rhamnose metabolic process
GIY02_14010	COG0738	Major facilitator superfamily
GIY02_14015	COG0745	RESPONSE REGULATOR receiver
GIY02_14035	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
GIY02_14040	COG1011	Hydrolase
GIY02_14050	COG0494	nUDIX hydrolase
GIY02_14070	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
GIY02_14095	COG4796	Type ii and iii secretion system protein
GIY02_14110	COG3266	domain, Protein
GIY02_14115	COG0338	D12 class N6 adenine-specific DNA methyltransferase
GIY02_14120	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GIY02_14140	COG2146	nitrite reductase [NAD(P)H] activity
GIY02_14145	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GIY02_14150	COG0402	S-adenosylhomocysteine deaminase activity
GIY02_14155	COG0738	Major facilitator superfamily
GIY02_14170	COG2184	nucleotidyltransferase activity
GIY02_14180	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GIY02_14185	COG1289	transmembrane transporter activity
GIY02_14195	COG1765	OsmC-like protein
GIY02_14200	COG3954	Phosphoribulokinase
GIY02_14210	COG0429	hydrolase of the alpha beta-hydrolase fold
GIY02_14215	COG0488	(ABC) transporter
GIY02_14230	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
GIY02_14235	COG1047	Peptidyl-prolyl cis-trans
GIY02_14245	COG0545	Peptidyl-prolyl cis-trans isomerase
GIY02_14250	COG2964	Protein conserved in bacteria
GIY02_14290	COG2906	2 iron, 2 sulfur cluster binding
GIY02_14305	COG0051	transcription antitermination factor activity, RNA binding
GIY02_14340	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GIY02_14345	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GIY02_14360	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GIY02_14410	COG0201	protein transport
GIY02_14425	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GIY02_14450	COG0789	Transcriptional regulator
GIY02_14455	COG3036	rescue of stalled ribosome
GIY02_14465	COG0569	domain protein
GIY02_14485	COG0758	DNA mediated transformation
GIY02_14495	COG0551	DNA topoisomerase type I activity
GIY02_14515	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GIY02_14550	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GIY02_14555	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GIY02_14560	COG1309	transcriptional regulator
GIY02_14580	COG4145	pantothenate transmembrane transporter activity
GIY02_14585	COG3924	membrane
GIY02_14590	COG0439	Biotin carboxylase
GIY02_14595	COG0511	ligase activity, forming carbon-carbon bonds
GIY02_14600	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
GIY02_14615	COG0604	alcohol dehydrogenase
GIY02_14620	COG2199	diguanylate cyclase activity
GIY02_14620	COG2200	EAL domain
GIY02_14625	COG1077	Cell shape determining protein MreB Mrl
GIY02_14630	COG1792	Involved in formation and maintenance of cell shape
GIY02_14635	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
GIY02_14645	COG1530	ribonuclease E activity
GIY02_14650	COG3164	Protein of unknown function
GIY02_14655	COG0312	modulator of DNA gyrase
GIY02_14660	COG0583	DNA-binding transcription factor activity
GIY02_14675	COG1289	transmembrane transporter activity
GIY02_14680	COG2732	(Barnase) inhibitor
GIY02_14715	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GIY02_14720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GIY02_14725	COG3105	Protein conserved in bacteria
GIY02_14730	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
GIY02_14745	COG0625	glutathione transferase activity
GIY02_14750	COG2969	positive regulation of protein catabolic process
GIY02_14755	COG0493	'glutamate synthase
GIY02_14760	COG0067	glutamate synthase
GIY02_14760	COG0069	glutamate synthase activity
GIY02_14760	COG0070	glutamate synthase
GIY02_14765	COG1242	4 iron, 4 sulfur cluster binding
GIY02_14770	COG5002	protein histidine kinase activity
GIY02_14770	COG0784	Response regulator, receiver
GIY02_14770	COG2198	Histidine kinase
GIY02_14775	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
GIY02_14780	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GIY02_14785	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_14795	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_14800	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GIY02_14805	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
GIY02_14810	COG1137	ATPase activity
GIY02_14815	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
GIY02_14820	COG3117	lipopolysaccharide transmembrane transporter activity
GIY02_14825	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
GIY02_14835	COG0530	calcium, potassium:sodium antiporter activity
GIY02_14840	COG1127	ABC transporter
GIY02_14845	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
GIY02_14850	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GIY02_14855	COG2854	intermembrane phospholipid transfer
GIY02_14860	COG3113	response to antibiotic
GIY02_14865	COG5007	Belongs to the BolA IbaG family
GIY02_14875	COG3423	Transcriptional regulator
GIY02_14880	COG0142	geranyltranstransferase activity
GIY02_14895	COG0697	spore germination
GIY02_14905	COG2027	D-alanyl-D-alanine carboxypeptidase
GIY02_14910	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GIY02_14915	COG1534	Rna-binding protein
GIY02_14940	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GIY02_14955	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GIY02_14995	COG0195	Participates in both transcription termination and antitermination
GIY02_15040	COG0814	amino acid
GIY02_15045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_15065	COG3153	acetyltransferase
GIY02_15080	COG0693	protein deglycase activity
GIY02_15085	COG0702	epimerase
GIY02_15090	COG0701	Predicted permease
GIY02_15095	COG2823	Periplasmic or secreted lipoprotein
GIY02_15115	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GIY02_15130	COG2222	sugar isomerase
GIY02_15135	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
GIY02_15140	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_15145	COG3716	PTS system mannose fructose sorbose family IID component
GIY02_15155	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_15165	COG1349	DNA-binding transcription factor activity
GIY02_15170	COG2721	sulfolactate sulfo-lyase activity
GIY02_15180	COG2084	Dehydrogenase
GIY02_15185	COG1929	Belongs to the glycerate kinase type-1 family
GIY02_15195	COG0668	transmembrane transport
GIY02_15210	COG1741	Belongs to the pirin family
GIY02_15215	COG0583	DNA-binding transcription factor activity
GIY02_15220	COG3152	Membrane
GIY02_15225	COG0435	Glutathione S-transferase
GIY02_15230	COG2259	Doxx family
GIY02_15245	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
GIY02_15250	COG4575	ribosome binding
GIY02_15255	COG1422	Protein of unknown function (DUF1090)
GIY02_15265	COG0586	Pfam SNARE associated Golgi protein
GIY02_15270	COG2186	Transcriptional regulator
GIY02_15275	COG2271	Major facilitator Superfamily
GIY02_15285	COG2721	sulfolactate sulfo-lyase activity
GIY02_15295	COG0861	Integral membrane protein TerC family
GIY02_15300	COG0673	inositol 2-dehydrogenase activity
GIY02_15305	COG1451	nucleotide metabolic process
GIY02_15315	COG0446	pyridine nucleotide-disulphide oxidoreductase
GIY02_15315	COG1902	pentaerythritol trinitrate reductase activity
GIY02_15360	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
GIY02_15360	COG3408	Glycogen debranching enzyme
GIY02_15370	COG0531	amino acid
GIY02_15375	COG0531	amino acid
GIY02_15380	COG2731	YhcH YjgK YiaL family protein
GIY02_15385	COG3250	beta-galactosidase activity
GIY02_15390	COG1609	Transcriptional regulator
GIY02_15395	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GIY02_15405	COG1695	Transcriptional regulator
GIY02_15410	COG2375	cellular response to nickel ion
GIY02_15425	COG1461	Dihydroxyacetone kinase
GIY02_15430	COG2376	Dihydroxyacetone kinase
GIY02_15475	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
GIY02_15485	COG0477	Major facilitator Superfamily
GIY02_15495	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GIY02_15500	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
GIY02_15515	COG3663	DNA glycosylase
GIY02_15520	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GIY02_15525	COG0358	DNA primase activity
GIY02_15540	COG0477	Major facilitator Superfamily
GIY02_15550	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GIY02_15565	COG4991	sh3 domain protein
GIY02_15570	COG3025	triphosphatase activity
GIY02_15590	COG2960	long-chain fatty acid transporting porin activity
GIY02_15600	COG3384	dioxygenase
GIY02_15605	COG0754	glutathionylspermidine amidase activity
GIY02_15620	COG0494	nUDIX hydrolase
GIY02_15625	COG3151	Protein conserved in bacteria
GIY02_15630	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GIY02_15635	COG3150	esterase
GIY02_15645	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GIY02_15650	COG2249	NAD(P)H dehydrogenase (quinone) activity
GIY02_15655	COG0642	Histidine kinase
GIY02_15660	COG0745	RESPONSE REGULATOR receiver
GIY02_15665	COG3111	PFAM Bacterial OB fold (BOF) protein
GIY02_15670	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
GIY02_15680	COG0204	Acyl-transferase
GIY02_15685	COG2132	Multicopper oxidase
GIY02_15690	COG1032	radical SAM domain protein
GIY02_15700	COG0656	L-ascorbic acid biosynthetic process
GIY02_15705	COG1979	alcohol dehydrogenase
GIY02_15710	COG2207	Transcriptional regulator
GIY02_15715	COG0586	Pfam SNARE associated Golgi protein
GIY02_15720	COG0626	cystathionine gamma-synthase activity
GIY02_15725	COG0811	peptide transport
GIY02_15730	COG0848	biopolymer transport protein
GIY02_15740	COG0625	glutathione transferase activity
GIY02_15750	COG0754	glutathionylspermidine amidase activity
GIY02_15755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GIY02_15770	COG1802	Transcriptional regulator
GIY02_15780	COG2267	carboxylic ester hydrolase activity
GIY02_15785	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GIY02_15790	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_15795	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_15800	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GIY02_15815	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_15830	COG0583	DNA-binding transcription factor activity
GIY02_15835	COG1652	LysM domain
GIY02_15840	COG3753	Protein conserved in bacteria
GIY02_15845	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GIY02_15850	COG1917	Cupin 2, conserved barrel domain protein
GIY02_15850	COG4977	sequence-specific DNA binding
GIY02_15865	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
GIY02_15875	COG4771	TonB-dependent receptor
GIY02_15885	COG2382	esterase
GIY02_15905	COG2186	Transcriptional regulator
GIY02_15930	COG2731	YhcH YjgK YiaL family protein
GIY02_15950	COG1811	Na channel or pump
GIY02_15960	COG2211	Major facilitator Superfamily
GIY02_15975	COG1194	a g-specific adenine glycosylase
GIY02_15985	COG3171	Protein conserved in bacteria
GIY02_15995	COG4214	carbohydrate transport
GIY02_16010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GIY02_16025	COG0762	integral membrane protein
GIY02_16030	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GIY02_16035	COG2805	Type II/IV secretion system protein
GIY02_16040	COG2197	response regulator
GIY02_16055	COG0189	ligase activity
GIY02_16060	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GIY02_16065	COG2356	endonuclease I
GIY02_16075	COG2814	Major facilitator Superfamily
GIY02_16120	COG2146	nitrite reductase [NAD(P)H] activity
GIY02_16135	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_16140	COG1414	Transcriptional regulator
GIY02_16170	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_16175	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
GIY02_16195	COG0501	Belongs to the peptidase M48B family
GIY02_16200	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GIY02_16215	COG0191	fructose-bisphosphate aldolase activity
GIY02_16220	COG0668	transmembrane transport
GIY02_16225	COG1279	arginine transmembrane transporter activity
GIY02_16230	COG2968	Membrane
GIY02_16245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GIY02_16250	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GIY02_16270	COG0006	proline dipeptidase activity
GIY02_16275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GIY02_16280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GIY02_16300	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_16305	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GIY02_16325	COG2723	6-phospho-beta-galactosidase activity
GIY02_16330	COG1737	Transcriptional regulator
GIY02_16340	COG1272	protein, Hemolysin III
GIY02_16350	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
GIY02_16360	COG0716	FMN binding
GIY02_16365	COG4974	Belongs to the 'phage' integrase family
GIY02_16375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GIY02_16420	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
GIY02_16435	COG3539	Fimbrial protein
GIY02_16445	COG3188	usher protein
GIY02_16450	COG3121	Chaperone
GIY02_16460	COG3539	Fimbrial protein
GIY02_16475	COG0124	histidyl-tRNA synthetase
GIY02_16480	COG0124	histidyl-tRNA synthetase
GIY02_16490	COG0531	amino acid
GIY02_16500	COG0753	catalase activity
GIY02_16505	COG1609	Transcriptional regulator
GIY02_16510	COG0483	inositol monophosphate 1-phosphatase activity
GIY02_16515	COG2271	Major facilitator Superfamily
GIY02_16545	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GIY02_16560	COG0531	amino acid
GIY02_16565	COG1982	Orn Lys Arg decarboxylase major
GIY02_16575	COG3104	oligopeptide transport
GIY02_16580	COG1538	Outer membrane efflux protein
GIY02_16585	COG1289	transmembrane transporter activity
GIY02_16600	COG3592	Divergent 4Fe-4S mono-cluster
GIY02_16605	COG2388	GCN5-related N-acetyl-transferase
GIY02_16615	COG3539	Fimbrial protein
GIY02_16620	COG3539	Fimbrial protein
GIY02_16625	COG3539	Fimbrial protein
GIY02_16630	COG3188	usher protein
GIY02_16635	COG3121	Chaperone
GIY02_16640	COG3539	Fimbrial protein
GIY02_16655	COG4974	Belongs to the 'phage' integrase family
GIY02_16660	COG0582	viral genome integration into host DNA
GIY02_16685	COG3539	Fimbrial protein
GIY02_16690	COG3121	Chaperone
GIY02_16695	COG3188	usher protein
GIY02_16710	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GIY02_16720	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_16730	COG4638	Rieske (2fe-2S)
GIY02_16740	COG1960	acyl-CoA dehydrogenase activity
GIY02_16745	COG0154	amidase activity
GIY02_16755	COG1846	Transcriptional regulator
GIY02_16760	COG0697	spore germination
GIY02_16775	COG0640	Transcriptional regulator
GIY02_16790	COG0667	Aldo Keto reductase
GIY02_16795	COG0814	amino acid
GIY02_16805	COG0583	DNA-binding transcription factor activity
GIY02_16810	COG0183	Belongs to the thiolase family
GIY02_16815	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_16820	COG2814	Major facilitator Superfamily
GIY02_16855	COG1794	racemase activity, acting on amino acids and derivatives
GIY02_16860	COG0583	DNA-binding transcription factor activity
GIY02_16865	COG0019	diaminopimelate decarboxylase activity
GIY02_16870	COG1609	Transcriptional regulator
GIY02_16880	COG1609	Transcriptional regulator
GIY02_16895	COG0667	Aldo Keto reductase
GIY02_16905	COG0861	Integral membrane protein TerC family
GIY02_16935	COG2165	general secretion pathway protein
GIY02_16940	COG4795	General secretion pathway protein
GIY02_16955	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
GIY02_16960	COG1025	Belongs to the peptidase M16 family
GIY02_16965	COG1074	ATP-dependent DNA helicase activity
GIY02_16970	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
GIY02_16975	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
GIY02_16975	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GIY02_16980	COG0860	N-Acetylmuramoyl-L-alanine amidase
GIY02_17000	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
GIY02_17005	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
GIY02_17010	COG2166	iron-sulfur cluster assembly
GIY02_17015	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GIY02_17020	COG0583	DNA-binding transcription factor activity
GIY02_17025	COG2363	Small membrane protein
GIY02_17040	COG1760	l-serine dehydratase
GIY02_17045	COG0814	amino acid
GIY02_17050	COG1611	Belongs to the LOG family
GIY02_17065	COG3098	single-species biofilm formation
GIY02_17070	COG0564	pseudouridine synthase activity
GIY02_17075	COG0716	FMN binding
GIY02_17085	COG2271	Major facilitator Superfamily
GIY02_17090	COG4948	Mandelate Racemase Muconate Lactonizing
GIY02_17095	COG4948	Mandelate Racemase Muconate Lactonizing
GIY02_17100	COG1929	Belongs to the glycerate kinase type-1 family
GIY02_17110	COG4999	Histidine kinase
GIY02_17110	COG3437	response regulator, receiver
GIY02_17110	COG3850	Histidine kinase
GIY02_17110	COG2205	protein histidine kinase activity
GIY02_17120	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GIY02_17125	COG3956	TIGRFAM MazG family protein
GIY02_17145	COG0602	queuosine metabolic process
GIY02_17150	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_17155	COG0720	synthase
GIY02_17175	COG2234	aminopeptidase activity
GIY02_17205	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GIY02_17235	COG4942	peptidase
GIY02_17235	COG1388	LysM domain
GIY02_17240	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GIY02_17260	COG0163	prenyltransferase activity
GIY02_17265	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
GIY02_17280	COG3121	Chaperone
GIY02_17315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_17320	COG4558	Periplasmic binding protein
GIY02_17325	COG3720	iron ion transport
GIY02_17345	COG0679	Auxin Efflux Carrier
GIY02_17350	COG0583	DNA-binding transcription factor activity
GIY02_17360	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GIY02_17365	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GIY02_17370	COG1121	(ABC) transporter
GIY02_17385	COG0309	Hydrogenase expression formation protein (HypE)
GIY02_17390	COG0409	Hydrogenase expression formation protein
GIY02_17395	COG0298	carbon dioxide binding
GIY02_17400	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
GIY02_17415	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
GIY02_17420	COG0651	ATP synthesis coupled electron transport
GIY02_17425	COG0650	Formate hydrogenlyase subunit 4
GIY02_17430	COG3261	NADH dehydrogenase
GIY02_17430	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
GIY02_17435	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GIY02_17440	COG3260	NADH ubiquinone oxidoreductase 20
GIY02_17450	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
GIY02_17455	COG2723	6-phospho-beta-galactosidase activity
GIY02_17460	COG1263	PTS System
GIY02_17460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_17465	COG1609	Transcriptional regulator
GIY02_17470	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
GIY02_17475	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
GIY02_17480	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
GIY02_17505	COG1349	DNA-binding transcription factor activity
GIY02_17510	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_17515	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_17525	COG3732	PTS system glucitol sorbitol-specific
GIY02_17530	COG3730	PTS system glucitol sorbitol-specific
GIY02_17535	COG2951	lytic endotransglycosylase activity
GIY02_17550	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GIY02_17555	COG0803	Belongs to the bacterial solute-binding protein 9 family
GIY02_17560	COG1546	Belongs to the CinA family
GIY02_17610	COG2823	Periplasmic or secreted lipoprotein
GIY02_17615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GIY02_17620	COG1238	metal cluster binding
GIY02_17640	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GIY02_17645	COG2814	Major facilitator Superfamily
GIY02_17650	COG1566	PFAM secretion protein HlyD family protein
GIY02_17655	COG1846	Transcriptional regulator
GIY02_17665	COG4176	ABC-type proline glycine betaine transport system permease component
GIY02_17675	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GIY02_17680	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GIY02_17690	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
GIY02_17695	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GIY02_17705	COG4575	ribosome binding
GIY02_17720	COG2916	Histone family protein nucleoid-structuring protein H-NS
GIY02_17735	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GIY02_17740	COG0640	Transcriptional regulator
GIY02_17750	COG0583	DNA-binding transcription factor activity
GIY02_17755	COG0671	phosphoesterase, PA-phosphatase related
GIY02_17760	COG3284	Transcriptional regulator
GIY02_17765	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_17770	COG4608	Belongs to the ABC transporter superfamily
GIY02_17775	COG0444	Belongs to the ABC transporter superfamily
GIY02_17780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GIY02_17785	COG0601	transmembrane transport
GIY02_17790	COG0747	negative chemotaxis
GIY02_17795	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
GIY02_17825	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_17830	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
GIY02_17835	COG0583	DNA-binding transcription factor activity
GIY02_17840	COG0477	Major facilitator Superfamily
GIY02_17845	COG4133	protoheme IX ABC transporter activity
GIY02_17850	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GIY02_17855	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GIY02_17860	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GIY02_17870	COG1138	Cytochrome C-type biogenesis protein
GIY02_17875	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GIY02_17880	COG3088	subunit of a heme lyase
GIY02_17880	COG4235	cytochrome complex assembly
GIY02_17885	COG3088	subunit of a heme lyase
GIY02_17885	COG4235	cytochrome complex assembly
GIY02_17890	COG3005	denitrification pathway
GIY02_17895	COG0243	molybdopterin cofactor binding
GIY02_17905	COG3813	Protein conserved in bacteria
GIY02_17915	COG2169	Transcriptional regulator
GIY02_17925	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GIY02_17945	COG1074	ATP-dependent DNA helicase activity
GIY02_17960	COG0582	viral genome integration into host DNA
GIY02_17975	COG2867	negative regulation of translational initiation
GIY02_17990	COG0497	DNA recombination
GIY02_18000	COG4536	flavin adenine dinucleotide binding
GIY02_18005	COG4137	Cytochrome C assembly protein
GIY02_18010	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GIY02_18045	COG2885	chlorophyll binding
GIY02_18050	COG2199	diguanylate cyclase activity
GIY02_18060	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GIY02_18065	COG0287	Prephenate dehydrogenase
GIY02_18065	COG1605	Chorismate mutase
GIY02_18075	COG0077	Prephenate dehydratase
GIY02_18075	COG1605	Chorismate mutase
GIY02_18085	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GIY02_18090	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GIY02_18095	COG0564	pseudouridine synthase activity
GIY02_18105	COG0542	response to heat
GIY02_18130	COG0477	Major facilitator Superfamily
GIY02_18135	COG5544	Lipoprotein
GIY02_18140	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GIY02_18155	COG3118	belongs to the thioredoxin family
GIY02_18160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GIY02_18175	COG0513	Belongs to the DEAD box helicase family
GIY02_18185	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
GIY02_18200	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
GIY02_18205	COG3026	antisigma factor binding
GIY02_18210	COG3086	response to oxidative stress
GIY02_18220	COG0681	Belongs to the peptidase S26 family
GIY02_18240	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
GIY02_18250	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
GIY02_18255	COG1737	Transcriptional regulator
GIY02_18265	COG0560	Phosphoserine phosphatase
GIY02_18270	COG0590	tRNA wobble adenosine to inosine editing
GIY02_18280	COG0047	phosphoribosylformylglycinamidine synthase activity
GIY02_18280	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GIY02_18285	COG2205	protein histidine kinase activity
GIY02_18290	COG3170	Tfp pilus assembly protein FimV
GIY02_18295	COG2204	response regulator
GIY02_18300	COG0347	Belongs to the P(II) protein family
GIY02_18305	COG1017	nitric oxide dioxygenase activity
GIY02_18305	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GIY02_18315	COG2259	Doxx family
GIY02_18320	COG2814	Major facilitator Superfamily
GIY02_18325	COG3711	transcriptional antiterminator
GIY02_18330	COG3683	transport system, periplasmic component
GIY02_18335	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
GIY02_18360	COG0822	iron-sulfur transferase activity
GIY02_18380	COG0633	Ferredoxin
GIY02_18385	COG2975	iron-sulfur cluster assembly
GIY02_18400	COG2897	thiosulfate sulfurtransferase activity
GIY02_18405	COG2373	Large extracellular alpha-helical protein
GIY02_18410	COG4953	penicillin-binding protein 1C
GIY02_18440	COG2976	Protein conserved in bacteria
GIY02_18455	COG1645	bacterial-type flagellum-dependent swarming motility
GIY02_18475	COG0517	IMP dehydrogenase activity
GIY02_18475	COG0516	GMP reductase activity
GIY02_18510	COG2200	EAL domain
GIY02_18515	COG0248	Ppx GppA phosphatase
GIY02_18530	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
GIY02_18535	COG2211	Major facilitator Superfamily
GIY02_18545	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GIY02_18560	COG2723	6-phospho-beta-galactosidase activity
GIY02_18570	COG2233	PERMEase
GIY02_18585	COG1393	Belongs to the ArsC family
GIY02_18590	COG4783	chaperone-mediated protein folding
GIY02_18595	COG0628	permease
GIY02_18600	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GIY02_18605	COG2716	regulation of RNA biosynthetic process
GIY02_18615	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
GIY02_18625	COG2321	neutral zinc metallopeptidase
GIY02_18635	COG0400	carboxylic ester hydrolase activity
GIY02_18650	COG1393	Belongs to the ArsC family
GIY02_18660	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GIY02_18665	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
GIY02_18665	COG0493	'glutamate synthase
GIY02_18675	COG5342	invasion associated locus B
GIY02_18680	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GIY02_18700	COG0860	N-Acetylmuramoyl-L-alanine amidase
GIY02_18720	COG2837	iron assimilation
GIY02_18725	COG4150	thiosulfate binding
GIY02_18730	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
GIY02_18735	COG4208	sulfate ABC transporter
GIY02_18740	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
GIY02_18770	COG2190	(PTS) system
GIY02_18780	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_18785	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GIY02_18805	COG3530	Putative quorum-sensing-regulated virulence factor
GIY02_18810	COG0385	Bile acid
GIY02_18815	COG0583	DNA-binding transcription factor activity
GIY02_18865	COG3415	Transposase
GIY02_18870	COG3415	Transposase
GIY02_18885	COG2199	diguanylate cyclase activity
GIY02_18885	COG2200	EAL domain
GIY02_18890	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GIY02_18905	COG0667	Aldo Keto reductase
GIY02_18910	COG3961	Belongs to the TPP enzyme family
GIY02_18925	COG3279	Response regulator of the LytR AlgR family
GIY02_18930	COG3275	phosphorelay sensor kinase activity
GIY02_18935	COG0436	Aminotransferase
GIY02_18945	COG2807	transmembrane transport
GIY02_18950	COG0590	tRNA wobble adenosine to inosine editing
GIY02_18975	COG2116	formate transmembrane transporter activity
GIY02_18980	COG2853	Lipoprotein
GIY02_18990	COG3691	Protein conserved in bacteria
GIY02_19005	COG2062	phosphohistidine phosphatase, SixA
GIY02_19015	COG2890	protein-(glutamine-N5) methyltransferase activity
GIY02_19030	COG0730	response to heat
GIY02_19035	COG3101	peptidyl-lysine hydroxylation
GIY02_19050	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GIY02_19055	COG2814	Major facilitator Superfamily
GIY02_19060	COG2188	Transcriptional regulator
GIY02_19070	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_19075	COG1447	Phosphotransferase system cellobiose-specific component IIA
GIY02_19085	COG0561	phosphatase activity
GIY02_19100	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GIY02_19110	COG0586	Pfam SNARE associated Golgi protein
GIY02_19120	COG0285	dihydrofolate synthase activity
GIY02_19125	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
GIY02_19130	COG1286	toxin biosynthetic process
GIY02_19135	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GIY02_19140	COG0163	prenyltransferase activity
GIY02_19150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GIY02_19160	COG4215	(ABC) transporter
GIY02_19165	COG4160	amino acid transport
GIY02_19170	COG4598	ABC transporter
GIY02_19190	COG1090	epimerase
GIY02_19195	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GIY02_19200	COG0625	glutathione transferase activity
GIY02_19205	COG0625	glutathione transferase activity
GIY02_19210	COG0622	Phosphoesterase
GIY02_19215	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
GIY02_19225	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GIY02_19240	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GIY02_19245	COG0471	metal ion transport
GIY02_19245	COG0490	domain, Protein
GIY02_19255	COG0436	Aminotransferase
GIY02_19260	COG0583	DNA-binding transcription factor activity
GIY02_19280	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
GIY02_19290	COG1034	ATP synthesis coupled electron transport
GIY02_19305	COG0839	Belongs to the complex I subunit 6 family
GIY02_19315	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GIY02_19320	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GIY02_19340	COG2153	protein acetylation
GIY02_19345	COG1169	isochorismate synthase
GIY02_19370	COG0318	PFAM AMP-dependent synthetase and ligase
GIY02_19395	COG0642	Histidine kinase
GIY02_19415	COG0247	lactate metabolic process
GIY02_19425	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GIY02_19430	COG2271	Major facilitator Superfamily
GIY02_19435	COG0584	glycerophosphoryl diester phosphodiesterase
GIY02_19440	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GIY02_19465	COG2205	protein histidine kinase activity
GIY02_19465	COG0784	Response regulator, receiver
GIY02_19475	COG2198	Histidine kinase
GIY02_19475	COG0642	Histidine kinase
GIY02_19495	COG2169	Transcriptional regulator
GIY02_19495	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GIY02_19505	COG4615	Cyclic peptide transporter
GIY02_19510	COG2239	Acts as a magnesium transporter
GIY02_19515	COG0659	secondary active sulfate transmembrane transporter activity
GIY02_19530	COG0628	permease
GIY02_19555	COG1349	DNA-binding transcription factor activity
GIY02_19560	COG0494	nUDIX hydrolase
GIY02_19580	COG1061	Type III restriction enzyme res subunit
GIY02_19585	COG1187	pseudouridine synthase activity
GIY02_19590	COG2814	Major facilitator Superfamily
GIY02_19600	COG4172	Belongs to the ABC transporter superfamily
GIY02_19605	COG4239	(ABC) transporter, permease
GIY02_19610	COG4174	ABC transporter (Permease)
GIY02_19615	COG4166	transmembrane transport
GIY02_19620	COG2200	EAL domain
GIY02_19625	COG0791	NLP P60 protein
GIY02_19630	COG0671	phosphoesterase, PA-phosphatase related
GIY02_19635	COG0523	cobalamin synthesis protein
GIY02_19645	COG1312	Catalyzes the dehydration of D-mannonate
GIY02_19670	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_19670	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_19675	COG1105	Belongs to the carbohydrate kinase PfkB family
GIY02_19680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_19680	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_19680	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
GIY02_19690	COG2855	membrane
GIY02_19695	COG0583	DNA-binding transcription factor activity
GIY02_19710	COG0833	amino acid
GIY02_19715	COG4771	TonB-dependent receptor
GIY02_19745	COG2311	Membrane
GIY02_19760	COG1129	ABC transporter
GIY02_19770	COG2949	membrane
GIY02_19780	COG1346	cytolysis
GIY02_19790	COG0583	DNA-binding transcription factor activity
GIY02_19795	COG2271	Major facilitator Superfamily
GIY02_19810	COG0625	glutathione transferase activity
GIY02_19815	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GIY02_19820	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GIY02_19835	COG2723	6-phospho-beta-galactosidase activity
GIY02_19840	COG2226	methyltransferase
GIY02_19845	COG1538	Outer membrane efflux protein
GIY02_19850	COG0586	Pfam SNARE associated Golgi protein
GIY02_19860	COG1686	Belongs to the peptidase S11 family
GIY02_19870	COG0277	FAD linked oxidase domain protein
GIY02_19875	COG1472	Belongs to the glycosyl hydrolase 3 family
GIY02_19880	COG1732	Glycine betaine
GIY02_19885	COG1174	glycine betaine transport
GIY02_19890	COG1125	glycine betaine transport
GIY02_19895	COG1174	glycine betaine transport
GIY02_19905	COG0789	Transcriptional regulator
GIY02_19910	COG3275	phosphorelay sensor kinase activity
GIY02_19920	COG4807	Protein conserved in bacteria
GIY02_19925	COG4808	Protein conserved in bacteria
GIY02_19940	COG0489	protein tyrosine kinase activity
GIY02_19950	COG5455	response to cobalt ion
GIY02_19955	COG0583	DNA-binding transcription factor activity
GIY02_19960	COG2252	PERMEase
GIY02_19980	COG2015	COG2015, Alkyl sulfatase and related hydrolases
GIY02_19990	COG2015	COG2015, Alkyl sulfatase and related hydrolases
GIY02_20015	COG0351	phosphomethylpyrimidine kinase
GIY02_20020	COG1830	Aldolase
GIY02_20045	COG2390	Transcriptional regulator
GIY02_20055	COG1070	Carbohydrate kinase
GIY02_20075	COG0745	RESPONSE REGULATOR receiver
GIY02_20080	COG2205	protein histidine kinase activity
GIY02_20110	COG0443	Heat shock 70 kDa protein
GIY02_20115	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GIY02_20130	COG2982	Protein involved in outer membrane biogenesis
GIY02_20135	COG1253	flavin adenine dinucleotide binding
GIY02_20175	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GIY02_20185	COG0463	Glycosyl transferase, family 2
GIY02_20200	COG2244	polysaccharide biosynthetic process
GIY02_20210	COG1215	transferase activity, transferring glycosyl groups
GIY02_20265	COG1088	dTDP-glucose 4,6-dehydratase activity
GIY02_20275	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
GIY02_20300	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GIY02_20315	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GIY02_20330	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GIY02_20335	COG0583	DNA-binding transcription factor activity
GIY02_20345	COG0531	amino acid
GIY02_20350	COG0640	Transcriptional regulator
GIY02_20355	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GIY02_20360	COG2925	Exonuclease
GIY02_20375	COG1686	Belongs to the peptidase S11 family
GIY02_20385	COG1289	transmembrane transporter activity
GIY02_20410	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
GIY02_20420	COG0095	Lipoate-protein ligase
GIY02_20425	COG0477	Major facilitator Superfamily
GIY02_20435	COG5001	Diguanylate cyclase
GIY02_20435	COG3300	MHYT domain
GIY02_20440	COG3615	Tellurite resistance protein tehB
GIY02_20470	COG0534	Mate efflux family protein
GIY02_20510	COG1181	Belongs to the D-alanine--D-alanine ligase family
GIY02_20515	COG0477	Major facilitator Superfamily
GIY02_20520	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GIY02_20540	COG2977	Belongs to the P-Pant transferase superfamily
GIY02_20560	COG1376	ErfK ybiS ycfS ynhG family protein
GIY02_20585	COG2197	response regulator
GIY02_20600	COG1250	3-hydroxyacyl-CoA dehydrogenase
GIY02_20605	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GIY02_20610	COG1960	acyl-CoA dehydrogenase activity
GIY02_20640	COG0154	amidase activity
GIY02_20665	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
GIY02_20715	COG3504	Conjugal transfer protein
GIY02_20795	COG4771	TonB-dependent receptor
GIY02_20800	COG1021	2,3-dihydroxybenzoate-AMP ligase
GIY02_20820	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GIY02_20820	COG3433	isochorismatase activity
GIY02_20820	COG2226	methyltransferase
GIY02_20835	COG1132	(ABC) transporter
GIY02_20840	COG2814	Major facilitator Superfamily
GIY02_20845	COG1169	isochorismate synthase
GIY02_20850	COG0582	viral genome integration into host DNA
GIY02_20865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_20870	COG0735	belongs to the Fur family
GIY02_20880	COG0523	cobalamin synthesis protein
GIY02_20910	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GIY02_20920	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GIY02_20935	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GIY02_20940	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GIY02_20945	COG1121	(ABC) transporter
GIY02_20950	COG0803	Belongs to the bacterial solute-binding protein 9 family
GIY02_20955	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GIY02_20965	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GIY02_20995	COG0803	Belongs to the bacterial solute-binding protein 9 family
GIY02_21000	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GIY02_21005	COG1121	(ABC) transporter
GIY02_21015	COG0582	viral genome integration into host DNA
GIY02_21040	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
GIY02_21070	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
GIY02_21080	COG1418	mRNA catabolic process
GIY02_21085	COG0270	DNA (cytosine-5-)-methyltransferase activity
GIY02_21090	COG3727	T/G mismatch-specific endonuclease activity
GIY02_21095	COG0697	spore germination
GIY02_21100	COG2354	Protein conserved in bacteria
GIY02_21105	COG5475	Uncharacterized small protein (DUF2158)
GIY02_21135	COG0366	Alpha amylase catalytic
GIY02_21160	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GIY02_21165	COG2197	response regulator
GIY02_21175	COG2197	response regulator
GIY02_21205	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GIY02_21210	COG3152	Membrane
GIY02_21215	COG3012	SEC-C Motif Domain Protein
GIY02_21215	COG3318	Belongs to the UPF0149 family
GIY02_21220	COG0814	amino acid
GIY02_21230	COG1528	Iron-storage protein
GIY02_21240	COG0477	Major facilitator Superfamily
GIY02_21250	COG1528	Iron-storage protein
GIY02_21255	COG1879	ABC-type sugar transport system periplasmic component
GIY02_21265	COG1172	Belongs to the binding-protein-dependent transport system permease family
GIY02_21295	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
GIY02_21305	COG3102	Protein conserved in bacteria
GIY02_21325	COG3788	relative of glutathione S-transferase, MAPEG superfamily
GIY02_21330	COG1801	Protein of unknown function DUF72
GIY02_21335	COG1335	isochorismatase
GIY02_21345	COG0494	nUDIX hydrolase
GIY02_21370	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GIY02_21375	COG1121	(ABC) transporter
GIY02_21380	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
GIY02_21385	COG0739	heme binding
GIY02_21390	COG1560	Kdo2-lipid A biosynthetic process
GIY02_21400	COG1737	Transcriptional regulator
GIY02_21405	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GIY02_21410	COG0129	dihydroxy-acid dehydratase activity
GIY02_21415	COG0800	Aldolase
GIY02_21425	COG3141	response to X-ray
GIY02_21430	COG2979	Protein of unknown function (DUF533)
GIY02_21435	COG1770	oligopeptidase
GIY02_21440	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GIY02_21450	COG2372	response to copper ion
GIY02_21455	COG1276	copper resistance
GIY02_21485	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GIY02_21505	COG1396	sequence-specific DNA binding
GIY02_21530	COG1484	DNA-dependent DNA replication
GIY02_21575	COG3008	intermembrane lipid transfer
GIY02_21580	COG2995	paraquat-inducible protein a
GIY02_21585	COG1956	GAF domain-containing protein
GIY02_21605	COG2814	Major facilitator Superfamily
GIY02_21610	COG1414	Transcriptional regulator
GIY02_21635	COG1278	Cold shock
GIY02_21640	COG0768	penicillin binding
GIY02_21645	COG2226	methyltransferase
GIY02_21660	COG3716	PTS system mannose fructose sorbose family IID component
GIY02_21665	COG3715	PTS system
GIY02_21670	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GIY02_21670	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_21675	COG1253	flavin adenine dinucleotide binding
GIY02_21680	COG2200	EAL domain
GIY02_21685	COG1760	l-serine dehydratase
GIY02_21705	COG0251	oxidation-reduction process
GIY02_21710	COG1199	ATP-dependent helicase activity
GIY02_21720	COG3065	identical protein binding
GIY02_21725	COG0318	PFAM AMP-dependent synthetase and ligase
GIY02_21730	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
GIY02_21740	COG2894	cell division
GIY02_21755	COG0179	Fumarylacetoacetate (FAA) hydrolase
GIY02_21765	COG0582	viral genome integration into host DNA
GIY02_21805	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GIY02_21990	COG5484	DNA packaging
GIY02_21990	COG3728	DNA packaging
GIY02_22125	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GIY02_22135	COG2135	peptidase activity
GIY02_22160	COG2719	SpoVR family
GIY02_22180	COG1619	proteins homologs of microcin C7 resistance protein MccF
GIY02_22190	COG4774	siderophore transport
GIY02_22205	COG2814	Major facilitator Superfamily
GIY02_22210	COG0583	DNA-binding transcription factor activity
GIY02_22225	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GIY02_22230	COG1882	Formate acetyltransferase
GIY02_22235	COG1760	l-serine dehydratase
GIY02_22245	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
GIY02_22255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GIY02_22365	COG0582	viral genome integration into host DNA
GIY02_22375	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GIY02_22465	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GIY02_22470	COG1403	HNH endonuclease
GIY02_22495	COG3772	lysozyme
GIY02_22575	COG4386	tail sheath protein
GIY02_22630	COG3274	enterobacterial common antigen metabolic process
GIY02_22675	COG3501	Rhs element vgr protein
GIY02_22690	COG3209	COG3209 Rhs family protein
GIY02_22755	COG3706	GGDEF domain
GIY02_22760	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
GIY02_22765	COG1560	Kdo2-lipid A biosynthetic process
GIY02_22775	COG3182	Iron-regulated membrane protein
GIY02_22795	COG2203	Gaf domain
GIY02_22795	COG2199	diguanylate cyclase activity
GIY02_22800	COG3042	response to heat
GIY02_22805	COG3189	MarR family transcriptional regulator
GIY02_22810	COG0504	CTP synthase activity
GIY02_22815	COG2807	transmembrane transport
GIY02_22820	COG2207	Transcriptional regulator
GIY02_22830	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GIY02_22835	COG2199	diguanylate cyclase activity
GIY02_22850	COG2766	serine protein kinase
GIY02_22855	COG3713	MltA-interacting MipA family protein
GIY02_22865	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GIY02_22875	COG3139	Protein of unknown function (DUF1315)
GIY02_22885	COG1335	isochorismatase
GIY02_22890	COG0252	asparaginase activity
GIY02_22895	COG0616	signal peptide processing
GIY02_22900	COG0778	Nitroreductase
GIY02_22910	COG0709	Synthesizes selenophosphate from selenide and ATP
GIY02_22915	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GIY02_22925	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_22925	COG3321	synthase
GIY02_22925	COG0604	alcohol dehydrogenase
GIY02_22935	COG0494	nUDIX hydrolase
GIY02_22940	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GIY02_22950	COG4136	ATPase activity
GIY02_22955	COG4135	transport system, permease component
GIY02_22960	COG4134	Bacterial extracellular solute-binding protein
GIY02_22965	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GIY02_22970	COG0398	Pfam SNARE associated Golgi protein
GIY02_22975	COG0398	Pfam SNARE associated Golgi protein
GIY02_22980	COG0708	Exodeoxyribonuclease III
GIY02_22990	COG3138	arginine N-succinyltransferase
GIY02_23010	COG0322	excinuclease ABC activity
GIY02_23020	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GIY02_23025	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_23030	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_23035	COG1447	Phosphotransferase system cellobiose-specific component IIA
GIY02_23040	COG1917	Cupin 2, conserved barrel domain protein
GIY02_23040	COG2169	Transcriptional regulator
GIY02_23045	COG1486	melibiose metabolic process
GIY02_23055	COG0753	catalase activity
GIY02_23070	COG1988	membrane-bound metal-dependent
GIY02_23075	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GIY02_23085	COG1607	acyl-coa hydrolase
GIY02_23105	COG3047	cAMP biosynthetic process
GIY02_23110	COG0583	DNA-binding transcription factor activity
GIY02_23125	COG1566	PFAM secretion protein HlyD family protein
GIY02_23130	COG1063	alcohol dehydrogenase
GIY02_23150	COG0135	phosphoribosylanthranilate isomerase activity
GIY02_23150	COG0134	indole-3-glycerol-phosphate synthase activity
GIY02_23155	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GIY02_23155	COG0512	Glutamine amidotransferase of anthranilate synthase
GIY02_23160	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GIY02_23170	COG0009	L-threonylcarbamoyladenylate synthase
GIY02_23180	COG5001	Diguanylate cyclase
GIY02_23180	COG1716	ATPase activity
GIY02_23190	COG2211	Major facilitator Superfamily
GIY02_23200	COG2207	Transcriptional regulator
GIY02_23205	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
GIY02_23210	COG1028	Short-chain dehydrogenase reductase Sdr
GIY02_23215	COG0616	signal peptide processing
GIY02_23225	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GIY02_23240	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GIY02_23250	COG0671	phosphoesterase, PA-phosphatase related
GIY02_23255	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
GIY02_23260	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
GIY02_23270	COG0023	Translation Initiation Factor
GIY02_23280	COG1349	DNA-binding transcription factor activity
GIY02_23295	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GIY02_23295	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GIY02_23300	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
GIY02_23310	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GIY02_23315	COG4172	Belongs to the ABC transporter superfamily
GIY02_23325	COG4171	peptide transport system, permease
GIY02_23330	COG4168	peptide transport system, permease
GIY02_23350	COG1473	amidohydrolase
GIY02_23360	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
GIY02_23365	COG1842	Phage shock protein A
GIY02_23375	COG1983	PspC domain protein
GIY02_23385	COG3106	COG3106 Predicted ATPase
GIY02_23400	COG3180	Ammonia monooxygenase
GIY02_23405	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GIY02_23410	COG4948	Mandelate Racemase Muconate Lactonizing
GIY02_23415	COG2866	Carboxypeptidase
GIY02_23420	COG4166	transmembrane transport
GIY02_23430	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GIY02_23445	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GIY02_23455	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GIY02_23465	COG0656	L-ascorbic acid biosynthetic process
GIY02_23515	COG0693	protein deglycase activity
GIY02_23525	COG0673	inositol 2-dehydrogenase activity
GIY02_23530	COG1349	DNA-binding transcription factor activity
GIY02_23535	COG4172	Belongs to the ABC transporter superfamily
GIY02_23545	COG1940	carbohydrate kinase activity
GIY02_23565	COG1940	carbohydrate kinase activity
GIY02_23570	COG0456	acetyltransferase
GIY02_23580	COG0513	Belongs to the DEAD box helicase family
GIY02_23590	COG0589	response to stress
GIY02_23595	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
GIY02_23605	COG3042	response to heat
GIY02_23610	COG3187	Heat shock protein
GIY02_23615	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GIY02_23620	COG0586	Pfam SNARE associated Golgi protein
GIY02_23625	COG2911	Protein conserved in bacteria
GIY02_23635	COG3784	Protein of unknown function (DUF1318)
GIY02_23640	COG2207	Transcriptional regulator
GIY02_23645	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_23660	COG2030	dehydratase
GIY02_23660	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_23665	COG3396	Phenylacetate-CoA oxygenase
GIY02_23670	COG3460	Phenylacetate-CoA oxygenase
GIY02_23675	COG3396	Phenylacetate-CoA oxygenase
GIY02_23680	COG2151	metal-sulfur cluster biosynthetic enzyme
GIY02_23685	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GIY02_23690	COG1024	Enoyl-CoA hydratase
GIY02_23695	COG1024	Enoyl-CoA hydratase
GIY02_23705	COG2050	protein possibly involved in aromatic compounds catabolism
GIY02_23710	COG0183	Belongs to the thiolase family
GIY02_23715	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
GIY02_23720	COG3327	negative regulation of DNA-templated transcription, initiation
GIY02_23725	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GIY02_23740	COG1643	Atp-dependent helicase
GIY02_23750	COG1538	Outer membrane efflux protein
GIY02_23770	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GIY02_23775	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GIY02_23780	COG3138	arginine N-succinyltransferase
GIY02_23785	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_23790	COG3724	N-succinylarginine dihydrolase activity
GIY02_23795	COG2988	succinylglutamate desuccinylase activity
GIY02_23800	COG1113	amino acid transport
GIY02_23805	COG1434	Gram-negative-bacterium-type cell wall biogenesis
GIY02_23810	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GIY02_23845	COG3038	cytochrome b561
GIY02_23885	COG0583	DNA-binding transcription factor activity
GIY02_23890	COG3485	protocatechuate 3,4-dioxygenase
GIY02_23895	COG3485	protocatechuate 3,4-dioxygenase
GIY02_23900	COG5383	Protein conserved in bacteria
GIY02_23905	COG2272	Belongs to the type-B carboxylesterase lipase family
GIY02_23910	COG0583	DNA-binding transcription factor activity
GIY02_23915	COG1335	isochorismatase
GIY02_23925	COG0436	Aminotransferase
GIY02_23950	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GIY02_23955	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GIY02_23960	COG1275	C4-dicarboxylate transporter malic acid transport protein
GIY02_23965	COG0500	methyltransferase
GIY02_23970	COG2195	Cleaves the N-terminal amino acid of tripeptides
GIY02_23975	COG0747	negative chemotaxis
GIY02_23985	COG0697	spore germination
GIY02_23990	COG2207	Transcriptional regulator
GIY02_23990	COG3708	Transcriptional regulator
GIY02_23995	COG3135	benzoate transporter
GIY02_24000	COG1396	sequence-specific DNA binding
GIY02_24005	COG0826	peptidase U32
GIY02_24020	COG1294	oxidase, subunit
GIY02_24025	COG1271	oxidase subunit
GIY02_24030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GIY02_24035	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
GIY02_24040	COG3842	ATPase activity
GIY02_24045	COG1176	ABC-type spermidine putrescine transport system, permease component I
GIY02_24050	COG1177	transmembrane transport
GIY02_24055	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_24080	COG2267	carboxylic ester hydrolase activity
GIY02_24085	COG1012	belongs to the aldehyde dehydrogenase family
GIY02_24090	COG0747	negative chemotaxis
GIY02_24100	COG3238	Protein conserved in bacteria
GIY02_24105	COG1247	-acetyltransferase
GIY02_24115	COG2130	NADP-dependent
GIY02_24120	COG3691	Protein conserved in bacteria
GIY02_24125	COG4772	TonB-dependent receptor
GIY02_24155	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_24165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_24185	COG1126	abc transporter atp-binding protein
GIY02_24200	COG0625	glutathione transferase activity
GIY02_24225	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GIY02_24230	COG2162	N-hydroxyarylamine O-acetyltransferase activity
GIY02_24235	COG2181	nitrate reductase activity
GIY02_24240	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
GIY02_24245	COG1140	nitrate reductase beta subunit
GIY02_24250	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GIY02_24270	COG1414	Transcriptional regulator
GIY02_24275	COG4948	Mandelate Racemase Muconate Lactonizing
GIY02_24280	COG4829	muconolactone delta-isomerase
GIY02_24285	COG3485	protocatechuate 3,4-dioxygenase
GIY02_24295	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
GIY02_24310	COG0697	spore germination
GIY02_24320	COG0437	4 iron, 4 sulfur cluster binding
GIY02_24325	COG2864	formate dehydrogenase
GIY02_24365	COG0559	Belongs to the binding-protein-dependent transport system permease family
GIY02_24380	COG0410	ABC transporter
GIY02_24385	COG2814	Major facilitator Superfamily
GIY02_24395	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GIY02_24415	COG0747	negative chemotaxis
GIY02_24420	COG1064	alcohol dehydrogenase
GIY02_24430	COG0488	(ABC) transporter
GIY02_24450	COG1609	Transcriptional regulator
GIY02_24475	COG1764	response to oxidative stress
GIY02_24490	COG2837	iron assimilation
GIY02_24495	COG3781	membrane
GIY02_24505	COG1294	oxidase, subunit
GIY02_24510	COG1271	oxidase subunit
GIY02_24515	COG0243	molybdopterin cofactor binding
GIY02_24520	COG0583	DNA-binding transcription factor activity
GIY02_24525	COG0583	DNA-binding transcription factor activity
GIY02_24535	COG2271	Major facilitator Superfamily
GIY02_24560	COG1309	transcriptional regulator
GIY02_24565	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
GIY02_24575	COG0583	DNA-binding transcription factor activity
GIY02_24640	COG0745	RESPONSE REGULATOR receiver
GIY02_24645	COG2205	protein histidine kinase activity
GIY02_24655	COG0076	glutamate decarboxylase activity
GIY02_24660	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GIY02_24665	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GIY02_24670	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GIY02_24675	COG1116	anion transmembrane transporter activity
GIY02_24680	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GIY02_24715	COG0583	DNA-binding transcription factor activity
GIY02_24720	COG2070	2-Nitropropane dioxygenase
GIY02_24840	COG2815	serine threonine protein kinase
GIY02_24840	COG0515	serine threonine protein kinase
GIY02_24850	COG3501	Rhs element vgr protein
GIY02_24930	COG0668	transmembrane transport
GIY02_24935	COG0454	-acetyltransferase
GIY02_24965	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GIY02_24970	COG2233	PERMEase
GIY02_24980	COG2351	hydroxyisourate hydrolase activity
GIY02_24985	COG0402	S-adenosylhomocysteine deaminase activity
GIY02_24990	COG1953	Uracil, thiamine, allantoin
GIY02_25040	COG0765	amino acid transport
GIY02_25055	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
GIY02_25065	COG2814	Major facilitator Superfamily
GIY02_25070	COG0583	DNA-binding transcription factor activity
GIY02_25140	COG0667	Aldo Keto reductase
GIY02_25145	COG2249	NAD(P)H dehydrogenase (quinone) activity
GIY02_25155	COG0656	L-ascorbic acid biosynthetic process
GIY02_25180	COG0667	Aldo Keto reductase
GIY02_25185	COG0667	Aldo Keto reductase
GIY02_25190	COG0667	Aldo Keto reductase
GIY02_25200	COG1609	Transcriptional regulator
GIY02_25205	COG1940	carbohydrate kinase activity
GIY02_25210	COG1447	Phosphotransferase system cellobiose-specific component IIA
GIY02_25215	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_25220	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_25225	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIY02_25230	COG4580	involved in the transport of maltose and maltodextrins
GIY02_25240	COG2723	6-phospho-beta-galactosidase activity