locus-tag class description FR848_00005 PF02690 Na+/Pi-cotransporter FR848_00010 PF02574 Homocysteine S-methyltransferase FR848_00010 PF02310 B12 binding domain FR848_00010 PF02607 B12 binding domain FR848_00010 PF02965 Vitamin B12 dependent methionine synthase, activation domain FR848_00010 PF00809 Pterin binding enzyme FR848_00015 PF01614 Bacterial transcriptional regulator FR848_00015 PF09339 IclR helix-turn-helix domain FR848_00025 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FR848_00030 PF00463 Isocitrate lyase family FR848_00035 PF01274 Malate synthase FR848_00040 PF04204 Homoserine O-succinyltransferase FR848_00045 PF13673 Acetyltransferase (GNAT) domain FR848_00070 PF02142 MGS-like domain FR848_00070 PF01808 AICARFT/IMPCHase bienzyme FR848_00075 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FR848_00075 PF02843 Phosphoribosylglycinamide synthetase, C domain FR848_00075 PF02844 Phosphoribosylglycinamide synthetase, N domain FR848_00080 PF02954 Bacterial regulatory protein, Fis family FR848_00080 PF00072 Response regulator receiver domain FR848_00080 PF00158 Sigma-54 interaction domain FR848_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_00085 PF00512 His Kinase A (phospho-acceptor) domain FR848_00090 PF13801 Heavy-metal resistance FR848_00095 PF07356 Protein of unknown function (DUF1481) FR848_00100 PF00216 Bacterial DNA-binding protein FR848_00105 PF04222 Protein of unknown function (DUF416) FR848_00110 PF04493 Endonuclease V FR848_00115 PF01208 Uroporphyrinogen decarboxylase (URO-D) FR848_00120 PF09297 NADH pyrophosphatase zinc ribbon domain FR848_00120 PF00293 NUDIX domain FR848_00125 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FR848_00130 PF13667 ThiC-associated domain FR848_00130 PF01964 Radical SAM ThiC family FR848_00135 PF02581 Thiamine monophosphate synthase FR848_00140 PF00899 ThiF family FR848_00145 PF02597 ThiS family FR848_00150 PF05690 Thiazole biosynthesis protein ThiG FR848_00155 PF06968 Biotin and Thiamin Synthesis associated domain FR848_00155 PF04055 Radical SAM superfamily FR848_00160 PF00990 Diguanylate cyclase, GGDEF domain FR848_00165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_00170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FR848_00175 PF03605 Anaerobic c4-dicarboxylate membrane transporter FR848_00180 PF04997 RNA polymerase Rpb1, domain 1 FR848_00180 PF00623 RNA polymerase Rpb1, domain 2 FR848_00180 PF04983 RNA polymerase Rpb1, domain 3 FR848_00180 PF05000 RNA polymerase Rpb1, domain 4 FR848_00180 PF04998 RNA polymerase Rpb1, domain 5 FR848_00185 PF04560 RNA polymerase Rpb2, domain 7 FR848_00185 PF00562 RNA polymerase Rpb2, domain 6 FR848_00185 PF10385 RNA polymerase beta subunit external 1 domain FR848_00185 PF04565 RNA polymerase Rpb2, domain 3 FR848_00185 PF04561 RNA polymerase Rpb2, domain 2 FR848_00185 PF04563 RNA polymerase beta subunit FR848_00190 PF00542 Ribosomal protein L7/L12 C-terminal domain FR848_00190 PF16320 Ribosomal protein L7/L12 dimerisation domain FR848_00195 PF00466 Ribosomal protein L10 FR848_00200 PF00687 Ribosomal protein L1p/L10e family FR848_00205 PF00298 Ribosomal protein L11, RNA binding domain FR848_00205 PF03946 Ribosomal protein L11, N-terminal domain FR848_00210 PF00467 KOW motif FR848_00210 PF02357 Transcription termination factor nusG FR848_00215 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FR848_00220 PF03144 Elongation factor Tu domain 2 FR848_00220 PF03143 Elongation factor Tu C-terminal domain FR848_00220 PF00009 Elongation factor Tu GTP binding domain FR848_00250 PF00485 Phosphoribulokinase / Uridine kinase family FR848_00255 PF03099 Biotin/lipoate A/B protein ligase family FR848_00255 PF02237 Biotin protein ligase C terminal domain FR848_00255 PF08279 HTH domain FR848_00260 PF01565 FAD binding domain FR848_00260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FR848_00290 PF12724 Flavodoxin domain FR848_00295 PF02386 Cation transport protein FR848_00300 PF09186 Domain of unknown function (DUF1949) FR848_00300 PF01205 Uncharacterized protein family UPF0029 FR848_00305 PF00557 Metallopeptidase family M24 FR848_00310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FR848_00310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FR848_00310 PF00378 Enoyl-CoA hydratase/isomerase FR848_00315 PF02803 Thiolase, C-terminal domain FR848_00315 PF00108 Thiolase, N-terminal domain FR848_00325 PF00175 Oxidoreductase NAD-binding domain FR848_00325 PF00970 Oxidoreductase FAD-binding domain FR848_00330 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FR848_00335 PF02357 Transcription termination factor nusG FR848_00340 PF01026 TatD related DNase FR848_00345 PF00902 Sec-independent protein translocase protein (TatC) FR848_00355 PF02416 mttA/Hcf106 family FR848_00360 PF03109 ABC1 family FR848_00365 PF02036 SCP-2 sterol transfer family FR848_00370 PF01209 ubiE/COQ5 methyltransferase family FR848_00375 PF02646 RmuC family FR848_00380 PF01048 Phosphorylase superfamily FR848_00385 PF01738 Dienelactone hydrolase family FR848_00390 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_00395 PF08267 Cobalamin-independent synthase, N-terminal domain FR848_00395 PF01717 Cobalamin-independent synthase, Catalytic domain FR848_00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_00400 PF03466 LysR substrate binding domain FR848_00405 PF00892 EamA-like transporter family FR848_00415 PF12146 Serine aminopeptidase, S33 FR848_00420 PF01810 LysE type translocator FR848_00430 PF01810 LysE type translocator FR848_00435 PF00271 Helicase conserved C-terminal domain FR848_00435 PF00270 DEAD/DEAH box helicase FR848_00435 PF09382 RQC domain FR848_00435 PF16124 RecQ zinc-binding FR848_00435 PF00570 HRDC domain FR848_00440 PF02253 Phospholipase A1 FR848_00445 PF03061 Thioesterase superfamily FR848_00450 PF00892 EamA-like transporter family FR848_00455 PF01544 CorA-like Mg2+ transporter protein FR848_00460 PF13361 UvrD-like helicase C-terminal domain FR848_00460 PF00580 UvrD/REP helicase N-terminal domain FR848_00465 PF13419 Haloacid dehalogenase-like hydrolase FR848_00470 PF00589 Phage integrase family FR848_00470 PF02899 Phage integrase, N-terminal SAM-like domain FR848_00475 PF04340 Protein of unknown function, DUF484 FR848_00480 PF01678 Diaminopimelate epimerase FR848_00485 PF13627 Prokaryotic lipoprotein-attachment site FR848_00490 PF00392 Bacterial regulatory proteins, gntR family FR848_00490 PF00155 Aminotransferase class I and II FR848_00495 PF01979 Amidohydrolase family FR848_00500 PF07690 Major Facilitator Superfamily FR848_00510 PF01491 Frataxin-like domain FR848_00515 PF12633 Adenylate cyclase NT domain FR848_00515 PF01295 Adenylate cyclase, class-I FR848_00520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FR848_00520 PF03900 Porphobilinogen deaminase, C-terminal domain FR848_00525 PF02602 Uroporphyrinogen-III synthase HemD FR848_00530 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FR848_00535 PF07219 HemY protein N-terminus FR848_00535 PF07719 Tetratricopeptide repeat FR848_00560 PF00324 Amino acid permease FR848_00565 PF03808 Glycosyl transferase WecB/TagA/CpsF family FR848_00570 PF06899 WzyE protein, O-antigen assembly polymerase FR848_00575 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FR848_00580 PF01943 Polysaccharide biosynthesis protein FR848_00585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FR848_00595 PF00483 Nucleotidyl transferase FR848_00600 PF16363 GDP-mannose 4,6 dehydratase FR848_00605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FR848_00605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FR848_00605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FR848_00610 PF02350 UDP-N-acetylglucosamine 2-epimerase FR848_00615 PF02706 Chain length determinant protein FR848_00620 PF00953 Glycosyl transferase family 4 FR848_00625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR848_00625 PF07497 Rho termination factor, RNA-binding domain FR848_00625 PF07498 Rho termination factor, N-terminal domain FR848_00630 PF00085 Thioredoxin FR848_00635 PF00270 DEAD/DEAH box helicase FR848_00635 PF00271 Helicase conserved C-terminal domain FR848_00640 PF02541 Ppx/GppA phosphatase family FR848_00650 PF03747 ADP-ribosylglycohydrolase FR848_00665 PF00580 UvrD/REP helicase N-terminal domain FR848_00665 PF13361 UvrD-like helicase C-terminal domain FR848_00670 PF04973 Nicotinamide mononucleotide transporter FR848_00675 PF01048 Phosphorylase superfamily FR848_00695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FR848_00695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FR848_00700 PF03466 LysR substrate binding domain FR848_00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_00705 PF00585 C-terminal regulatory domain of Threonine dehydratase FR848_00705 PF00291 Pyridoxal-phosphate dependent enzyme FR848_00710 PF00920 Dehydratase family FR848_00715 PF01063 Amino-transferase class IV FR848_00725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_00725 PF00205 Thiamine pyrophosphate enzyme, central domain FR848_00725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_00730 PF08046 IlvGEDA operon leader peptide FR848_00735 PF13335 Magnesium chelatase, subunit ChlI C-terminal FR848_00735 PF01078 Magnesium chelatase, subunit ChlI FR848_00740 PF04219 Protein of unknown function, DUF FR848_00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_00745 PF03466 LysR substrate binding domain FR848_00785 PF01177 Asp/Glu/Hydantoin racemase FR848_00790 PF07715 TonB-dependent Receptor Plug Domain FR848_00790 PF00593 TonB dependent receptor FR848_00795 PF05958 tRNA (Uracil-5-)-methyltransferase FR848_00800 PF07226 Protein of unknown function (DUF1422) FR848_00805 PF00440 Bacterial regulatory proteins, tetR family FR848_00810 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_00810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR848_00815 PF03466 LysR substrate binding domain FR848_00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_00820 PF00206 Lyase FR848_00820 PF14698 Argininosuccinate lyase C-terminal FR848_00825 PF00696 Amino acid kinase family FR848_00830 PF02774 Semialdehyde dehydrogenase, dimerisation domain FR848_00830 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR848_00835 PF07687 Peptidase dimerisation domain FR848_00835 PF01546 Peptidase family M20/M25/M40 FR848_00840 PF00311 Phosphoenolpyruvate carboxylase FR848_00845 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FR848_00850 PF12833 Helix-turn-helix domain FR848_00855 PF00923 Transaldolase/Fructose-6-phosphate aldolase FR848_00860 PF00465 Iron-containing alcohol dehydrogenase FR848_00865 PF08220 DeoR-like helix-turn-helix domain FR848_00865 PF00455 DeoR C terminal sensor domain FR848_00870 PF02219 Methylenetetrahydrofolate reductase FR848_00875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_00875 PF03466 LysR substrate binding domain FR848_00880 PF02627 Carboxymuconolactone decarboxylase family FR848_00885 PF03447 Homoserine dehydrogenase, NAD binding domain FR848_00885 PF00742 Homoserine dehydrogenase FR848_00885 PF00696 Amino acid kinase family FR848_00890 PF01053 Cys/Met metabolism PLP-dependent enzyme FR848_00895 PF01340 Met Apo-repressor, MetJ FR848_00900 PF01797 Transposase IS200 like FR848_00905 PF01197 Ribosomal protein L31 FR848_00910 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FR848_00910 PF18074 Primosomal protein N C-terminal domain FR848_00910 PF17764 3′ DNA-binding domain (3′BD) FR848_00910 PF00270 DEAD/DEAH box helicase FR848_00910 PF00271 Helicase conserved C-terminal domain FR848_00915 PF00356 Bacterial regulatory proteins, lacI family FR848_00920 PF05036 Sporulation related domain FR848_00925 PF00227 Proteasome subunit FR848_00930 PF00004 ATPase family associated with various cellular activities (AAA) FR848_00930 PF10431 C-terminal, D2-small domain, of ClpB protein FR848_00930 PF07724 AAA domain (Cdc48 subfamily) FR848_00935 PF01040 UbiA prenyltransferase family FR848_00940 PF03737 Aldolase/RraA FR848_00945 PF00365 Phosphofructokinase FR848_00950 PF01545 Cation efflux family FR848_00950 PF16916 Dimerisation domain of Zinc Transporter FR848_00955 PF07813 LTXXQ motif family protein FR848_00960 PF00072 Response regulator receiver domain FR848_00960 PF00486 Transcriptional regulatory protein, C terminal FR848_00965 PF16527 Two-component sensor protein CpxA, periplasmic domain FR848_00965 PF00672 HAMP domain FR848_00965 PF00512 His Kinase A (phospho-acceptor) domain FR848_00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_00970 PF03473 MOSC domain FR848_00970 PF03475 3-alpha domain FR848_00975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FR848_00975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FR848_00980 PF06379 L-rhamnose-proton symport protein (RhaT) FR848_00985 PF02311 AraC-like ligand binding domain FR848_00985 PF12833 Helix-turn-helix domain FR848_00990 PF02311 AraC-like ligand binding domain FR848_00990 PF12833 Helix-turn-helix domain FR848_01000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_01000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_01005 PF06134 L-rhamnose isomerase (RhaA) FR848_01010 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_01015 PF13407 Periplasmic binding protein domain FR848_01020 PF00005 ABC transporter FR848_01025 PF02653 Branched-chain amino acid transport system / permease component FR848_01030 PF02653 Branched-chain amino acid transport system / permease component FR848_01035 PF00465 Iron-containing alcohol dehydrogenase FR848_01040 PF05336 L-rhamnose mutarotase FR848_01050 PF18835 Beta helix repeat of Inulin fructotransferase FR848_01050 PF05048 Periplasmic copper-binding protein (NosD) FR848_01055 PF00251 Glycosyl hydrolases family 32 N-terminal domain FR848_01055 PF08244 Glycosyl hydrolases family 32 C terminal FR848_01065 PF00356 Bacterial regulatory proteins, lacI family FR848_01080 PF05552 Conserved TM helix FR848_01080 PF00924 Mechanosensitive ion channel FR848_01095 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_01095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_01100 PF00419 Fimbrial protein FR848_01105 PF00419 Fimbrial protein FR848_01110 PF00419 Fimbrial protein FR848_01115 PF00577 Outer membrane usher protein FR848_01115 PF13954 PapC N-terminal domain FR848_01115 PF13953 PapC C-terminal domain FR848_01120 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_01120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_01125 PF00419 Fimbrial protein FR848_01130 PF00419 Fimbrial protein FR848_01145 PF12464 Maltose acetyltransferase FR848_01145 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_01150 PF01306 LacY proton/sugar symporter FR848_01155 PF16874 Glycosyl hydrolase family 36 C-terminal domain FR848_01155 PF16875 Glycosyl hydrolase family 36 N-terminal domain FR848_01160 PF00356 Bacterial regulatory proteins, lacI family FR848_01160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR848_01165 PF07690 Major Facilitator Superfamily FR848_01195 PF03591 AzlC protein FR848_01210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_01220 PF01116 Fructose-bisphosphate aldolase class-II FR848_01225 PF03611 PTS system sugar-specific permease component FR848_01235 PF00365 Phosphofructokinase FR848_01240 PF00158 Sigma-54 interaction domain FR848_01240 PF00874 PRD domain FR848_01250 PF07470 Glycosyl Hydrolase Family 88 FR848_01255 PF03830 PTS system sorbose subfamily IIB component FR848_01260 PF03609 PTS system sorbose-specific iic component FR848_01275 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FR848_01275 PF04616 Glycosyl hydrolases family 43 FR848_01285 PF02634 FdhD/NarQ family FR848_01295 PF13247 4Fe-4S dicluster domain FR848_01295 PF09163 Formate dehydrogenase N, transmembrane FR848_01300 PF01292 Prokaryotic cytochrome b561 FR848_01305 PF04216 Protein involved in formate dehydrogenase formation FR848_01310 PF07859 alpha/beta hydrolase fold FR848_01315 PF09500 Putative thioesterase (yiiD_Cterm) FR848_01315 PF00583 Acetyltransferase (GNAT) family FR848_01320 PF02580 D-Tyr-tRNA(Tyr) deacylase FR848_01325 PF03631 Virulence factor BrkB FR848_01330 PF13419 Haloacid dehalogenase-like hydrolase FR848_01340 PF00120 Glutamine synthetase, catalytic domain FR848_01340 PF03951 Glutamine synthetase, beta-Grasp domain FR848_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_01345 PF00989 PAS fold FR848_01345 PF00512 His Kinase A (phospho-acceptor) domain FR848_01350 PF02954 Bacterial regulatory protein, Fis family FR848_01350 PF00158 Sigma-54 interaction domain FR848_01350 PF00072 Response regulator receiver domain FR848_01360 PF04055 Radical SAM superfamily FR848_01360 PF06969 HemN C-terminal domain FR848_01370 PF04220 Der GTPase activator (YihI) FR848_01375 PF01926 50S ribosome-binding GTPase FR848_01385 PF01367 5'-3' exonuclease, C-terminal SAM fold FR848_01385 PF00476 DNA polymerase family A FR848_01385 PF01612 3'-5' exonuclease FR848_01385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FR848_01390 PF01553 Acyltransferase FR848_01395 PF01323 DSBA-like thioredoxin domain FR848_01400 PF01636 Phosphotransferase enzyme family FR848_01405 PF06288 Protein of unknown function (DUF1040) FR848_01410 PF12804 MobA-like NTP transferase domain FR848_01415 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FR848_01435 PF07729 FCD domain FR848_01435 PF00392 Bacterial regulatory proteins, gntR family FR848_01440 PF07690 Major Facilitator Superfamily FR848_01445 PF00356 Bacterial regulatory proteins, lacI family FR848_01450 PF00294 pfkB family carbohydrate kinase FR848_01455 PF13407 Periplasmic binding protein domain FR848_01460 PF02653 Branched-chain amino acid transport system / permease component FR848_01465 PF00005 ABC transporter FR848_01470 PF05025 RbsD / FucU transport protein family FR848_01475 PF02705 K+ potassium transporter FR848_01480 PF12592 Protein of unknown function (DUF3763) FR848_01480 PF17868 AAA lid domain FR848_01480 PF07728 AAA domain (dynein-related subfamily) FR848_01485 PF05762 VWA domain containing CoxE-like protein FR848_01490 PF03590 Aspartate-ammonia ligase FR848_01495 PF01037 Lrp/AsnC ligand binding domain FR848_01500 PF00258 Flavodoxin FR848_01505 PF13932 GidA associated domain FR848_01505 PF01134 Glucose inhibited division protein A FR848_01510 PF02527 rRNA small subunit methyltransferase G FR848_01515 PF03899 ATP synthase I chain FR848_01520 PF00119 ATP synthase A chain FR848_01525 PF00137 ATP synthase subunit C FR848_01530 PF00430 ATP synthase B/B' CF(0) FR848_01535 PF00213 ATP synthase delta (OSCP) subunit FR848_01540 PF02874 ATP synthase alpha/beta family, beta-barrel domain FR848_01540 PF00306 ATP synthase alpha/beta chain, C terminal domain FR848_01540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR848_01545 PF00231 ATP synthase FR848_01550 PF02874 ATP synthase alpha/beta family, beta-barrel domain FR848_01550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR848_01555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FR848_01555 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FR848_01560 PF13229 Right handed beta helix region FR848_01565 PF12804 MobA-like NTP transferase domain FR848_01565 PF14602 Hexapeptide repeat of succinyl-transferase FR848_01565 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_01570 PF01380 SIS domain FR848_01580 PF12849 PBP superfamily domain FR848_01585 PF00528 Binding-protein-dependent transport system inner membrane component FR848_01590 PF00528 Binding-protein-dependent transport system inner membrane component FR848_01595 PF00005 ABC transporter FR848_01600 PF01895 PhoU domain FR848_01605 PF11471 Maltoporin periplasmic N-terminal extension FR848_01605 PF02264 LamB porin FR848_01610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR848_01610 PF00756 Putative esterase FR848_01615 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FR848_01620 PF13419 Haloacid dehalogenase-like hydrolase FR848_01630 PF00860 Permease family FR848_01635 PF03358 NADPH-dependent FMN reductase FR848_01645 PF03466 LysR substrate binding domain FR848_01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_01650 PF07690 Major Facilitator Superfamily FR848_01655 PF00583 Acetyltransferase (GNAT) family FR848_01660 PF01926 50S ribosome-binding GTPase FR848_01660 PF12631 MnmE helical domain FR848_01660 PF10396 GTP-binding protein TrmE N-terminus FR848_01665 PF14849 YidC periplasmic domain FR848_01665 PF02096 60Kd inner membrane protein FR848_01670 PF01809 Putative membrane protein insertion efficiency factor FR848_01675 PF00825 Ribonuclease P FR848_01680 PF00468 Ribosomal protein L34 FR848_01685 PF00308 Bacterial dnaA protein FR848_01685 PF08299 Bacterial dnaA protein helix-turn-helix FR848_01685 PF11638 DnaA N-terminal domain FR848_01690 PF02768 DNA polymerase III beta subunit, C-terminal domain FR848_01690 PF00712 DNA polymerase III beta subunit, N-terminal domain FR848_01690 PF02767 DNA polymerase III beta subunit, central domain FR848_01695 PF02463 RecF/RecN/SMC N terminal domain FR848_01700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_01700 PF01751 Toprim domain FR848_01700 PF18053 DNA gyrase B subunit insert domain FR848_01700 PF00204 DNA gyrase B FR848_01700 PF00986 DNA gyrase B subunit, carboxyl terminus FR848_01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_01705 PF03466 LysR substrate binding domain FR848_01710 PF00107 Zinc-binding dehydrogenase FR848_01710 PF08240 Alcohol dehydrogenase GroES-like domain FR848_01720 PF07729 FCD domain FR848_01720 PF00392 Bacterial regulatory proteins, gntR family FR848_01725 PF05035 2-keto-3-deoxy-galactonokinase FR848_01730 PF01081 KDPG and KHG aldolase FR848_01735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_01735 PF13378 Enolase C-terminal domain-like FR848_01740 PF07690 Major Facilitator Superfamily FR848_01745 PF07676 WD40-like Beta Propeller Repeat FR848_01745 PF12566 Protein of unknown function (DUF3748) FR848_01750 PF07119 Protein of unknown function (DUF1375) FR848_01755 PF00011 Hsp20/alpha crystallin family FR848_01760 PF00011 Hsp20/alpha crystallin family FR848_01765 PF02080 TrkA-C domain FR848_01765 PF06826 Predicted Permease Membrane Region FR848_01770 PF07702 UTRA domain FR848_01770 PF00392 Bacterial regulatory proteins, gntR family FR848_01775 PF00367 phosphotransferase system, EIIB FR848_01775 PF02378 Phosphotransferase system, EIIC FR848_01780 PF02056 Family 4 glycosyl hydrolase FR848_01780 PF11975 Family 4 glycosyl hydrolase C-terminal domain FR848_01785 PF02656 Domain of unknown function (DUF202) FR848_01790 PF02656 Domain of unknown function (DUF202) FR848_01800 PF00291 Pyridoxal-phosphate dependent enzyme FR848_01805 PF02447 GntP family permease FR848_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_01810 PF03466 LysR substrate binding domain FR848_01815 PF07690 Major Facilitator Superfamily FR848_01840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_01840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_01840 PF00205 Thiamine pyrophosphate enzyme, central domain FR848_01845 PF01842 ACT domain FR848_01850 PF00196 Bacterial regulatory proteins, luxR family FR848_01850 PF00072 Response regulator receiver domain FR848_01855 PF07730 Histidine kinase FR848_01855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_01855 PF05231 MASE1 FR848_01860 PF07690 Major Facilitator Superfamily FR848_01865 PF07690 Major Facilitator Superfamily FR848_01875 PF06711 Protein of unknown function (DUF1198) FR848_01885 PF01381 Helix-turn-helix FR848_01890 PF07690 Major Facilitator Superfamily FR848_01900 PF00266 Aminotransferase class-V FR848_01905 PF07702 UTRA domain FR848_01905 PF00392 Bacterial regulatory proteins, gntR family FR848_01910 PF01547 Bacterial extracellular solute-binding protein FR848_01915 PF08402 TOBE domain FR848_01915 PF00005 ABC transporter FR848_01920 PF00528 Binding-protein-dependent transport system inner membrane component FR848_01925 PF00528 Binding-protein-dependent transport system inner membrane component FR848_01930 PF02264 LamB porin FR848_01935 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FR848_01945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_01950 PF00356 Bacterial regulatory proteins, lacI family FR848_01960 PF04754 Putative transposase, YhgA-like FR848_01970 PF00892 EamA-like transporter family FR848_01985 PF02378 Phosphotransferase system, EIIC FR848_01985 PF00367 phosphotransferase system, EIIB FR848_01990 PF13580 SIS domain FR848_01995 PF07690 Major Facilitator Superfamily FR848_02000 PF02321 Outer membrane efflux protein FR848_02005 PF00873 AcrB/AcrD/AcrF family FR848_02010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_02010 PF00529 HlyD membrane-fusion protein of T1SS FR848_02015 PF00583 Acetyltransferase (GNAT) family FR848_02020 PF13977 BetI-type transcriptional repressor, C-terminal FR848_02020 PF00440 Bacterial regulatory proteins, tetR family FR848_02025 PF07690 Major Facilitator Superfamily FR848_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_02030 PF03466 LysR substrate binding domain FR848_02045 PF03180 NLPA lipoprotein FR848_02055 PF00293 NUDIX domain FR848_02060 PF12706 Beta-lactamase superfamily domain FR848_02065 PF01965 DJ-1/PfpI family FR848_02070 PF00107 Zinc-binding dehydrogenase FR848_02070 PF08240 Alcohol dehydrogenase GroES-like domain FR848_02090 PF01202 Shikimate kinase FR848_02125 PF13802 Galactose mutarotase-like FR848_02125 PF01055 Glycosyl hydrolases family 31 FR848_02130 PF08279 HTH domain FR848_02130 PF00874 PRD domain FR848_02130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_02130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_02130 PF05043 Mga helix-turn-helix domain FR848_02135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_02135 PF02378 Phosphotransferase system, EIIC FR848_02135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_02140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_02145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_02150 PF01116 Fructose-bisphosphate aldolase class-II FR848_02155 PF01116 Fructose-bisphosphate aldolase class-II FR848_02160 PF00480 ROK family FR848_02175 PF11975 Family 4 glycosyl hydrolase C-terminal domain FR848_02175 PF02056 Family 4 glycosyl hydrolase FR848_02180 PF00367 phosphotransferase system, EIIB FR848_02180 PF02378 Phosphotransferase system, EIIC FR848_02185 PF05170 AsmA family FR848_02190 PF00860 Permease family FR848_02195 PF03616 Sodium/glutamate symporter FR848_02200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_02200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_02205 PF00230 Major intrinsic protein FR848_02210 PF06005 Cell division protein ZapB FR848_02220 PF02611 CDP-diacylglycerol pyrophosphatase FR848_02230 PF00121 Triosephosphate isomerase FR848_02235 PF07305 Protein of unknown function (DUF1454) FR848_02240 PF05656 Protein of unknown function (DUF805) FR848_02245 PF00970 Oxidoreductase FAD-binding domain FR848_02245 PF00175 Oxidoreductase NAD-binding domain FR848_02250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FR848_02255 PF17191 RecG wedge domain FR848_02255 PF00270 DEAD/DEAH box helicase FR848_02255 PF00271 Helicase conserved C-terminal domain FR848_02260 PF00588 SpoU rRNA Methylase family FR848_02260 PF12105 SpoU, rRNA methylase, C-terminal FR848_02265 PF02824 TGS domain FR848_02265 PF13291 ACT domain FR848_02265 PF04607 Region found in RelA / SpoT proteins FR848_02270 PF01192 RNA polymerase Rpb6 FR848_02275 PF00625 Guanylate kinase FR848_02285 PF01653 NAD-dependent DNA ligase adenylation domain FR848_02285 PF03120 NAD-dependent DNA ligase OB-fold domain FR848_02290 PF03458 UPF0126 domain FR848_02300 PF03755 YicC-like family, N-terminal region FR848_02300 PF08340 Domain of unknown function (DUF1732) FR848_02305 PF01138 3' exoribonuclease family, domain 1 FR848_02305 PF03725 3' exoribonuclease family, domain 2 FR848_02310 PF00156 Phosphoribosyl transferase domain FR848_02315 PF00440 Bacterial regulatory proteins, tetR family FR848_02320 PF00692 dUTPase FR848_02325 PF02441 Flavoprotein FR848_02325 PF04127 DNA / pantothenate metabolism flavoprotein FR848_02330 PF04002 RadC-like JAB domain FR848_02335 PF00830 Ribosomal L28 family FR848_02340 PF00471 Ribosomal protein L33 FR848_02345 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FR848_02345 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FR848_02345 PF06827 Zinc finger found in FPG and IleRS FR848_02350 PF01467 Cytidylyltransferase-like FR848_02355 PF00535 Glycosyl transferase family 2 FR848_02360 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FR848_02365 PF00535 Glycosyl transferase family 2 FR848_02370 PF13439 Glycosyltransferase Family 4 FR848_02370 PF00534 Glycosyl transferases group 1 FR848_02375 PF13439 Glycosyltransferase Family 4 FR848_02375 PF00534 Glycosyl transferases group 1 FR848_02380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FR848_02405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FR848_02410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FR848_02415 PF01370 NAD dependent epimerase/dehydratase family FR848_02420 PF00155 Aminotransferase class I and II FR848_02425 PF00107 Zinc-binding dehydrogenase FR848_02425 PF08240 Alcohol dehydrogenase GroES-like domain FR848_02430 PF00535 Glycosyl transferase family 2 FR848_02435 PF04748 Divergent polysaccharide deacetylase FR848_02440 PF01551 Peptidase family M23 FR848_02445 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FR848_02445 PF01676 Metalloenzyme superfamily FR848_02450 PF00581 Rhodanese-like domain FR848_02455 PF00462 Glutaredoxin FR848_02460 PF02556 Preprotein translocase subunit SecB FR848_02465 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FR848_02465 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FR848_02470 PF06426 Serine acetyltransferase, N-terminal FR848_02470 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_02475 PF00588 SpoU rRNA Methylase family FR848_02480 PF01070 FMN-dependent dehydrogenase FR848_02485 PF07729 FCD domain FR848_02485 PF00392 Bacterial regulatory proteins, gntR family FR848_02490 PF02652 L-lactate permease FR848_02495 PF10928 Protein of unknown function (DUF2810) FR848_02505 PF05068 Mannitol repressor FR848_02510 PF08125 Mannitol dehydrogenase C-terminal domain FR848_02510 PF01232 Mannitol dehydrogenase Rossmann domain FR848_02515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_02515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_02515 PF02378 Phosphotransferase system, EIIC FR848_02520 PF11742 Protein of unknown function (DUF3302) FR848_02525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_02525 PF00529 HlyD membrane-fusion protein of T1SS FR848_02530 PF00043 Glutathione S-transferase, C-terminal domain FR848_02530 PF13417 Glutathione S-transferase, N-terminal domain FR848_02535 PF03841 L-seryl-tRNA selenium transferase FR848_02535 PF12390 Selenocysteine synthase N terminal FR848_02540 PF09106 Elongation factor SelB, winged helix FR848_02540 PF03144 Elongation factor Tu domain 2 FR848_02540 PF00009 Elongation factor Tu GTP binding domain FR848_02540 PF09107 Elongation factor SelB, winged helix FR848_02545 PF07944 Beta-L-arabinofuranosidase, GH127 FR848_02555 PF02311 AraC-like ligand binding domain FR848_02555 PF12833 Helix-turn-helix domain FR848_02560 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_02565 PF01261 Xylose isomerase-like TIM barrel FR848_02570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FR848_02575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_02575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_02580 PF07690 Major Facilitator Superfamily FR848_02585 PF16154 Domain of unknown function (DUF4862) FR848_02590 PF04074 YhcH/YjgK/YiaL FR848_02595 PF02615 Malate/L-lactate dehydrogenase FR848_02605 PF01614 Bacterial transcriptional regulator FR848_02605 PF09339 IclR helix-turn-helix domain FR848_02610 PF12800 4Fe-4S binding domain FR848_02610 PF13247 4Fe-4S dicluster domain FR848_02615 PF00155 Aminotransferase class I and II FR848_02620 PF00128 Alpha amylase, catalytic domain FR848_02625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FR848_02630 PF12833 Helix-turn-helix domain FR848_02635 PF02653 Branched-chain amino acid transport system / permease component FR848_02640 PF00005 ABC transporter FR848_02645 PF13407 Periplasmic binding protein domain FR848_02655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_02655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_02660 PF05360 yiaA/B two helix domain FR848_02665 PF01757 Acyltransferase family FR848_02670 PF13983 YsaB-like lipoprotein FR848_02675 PF02091 Glycyl-tRNA synthetase alpha subunit FR848_02680 PF02092 Glycyl-tRNA synthetase beta subunit FR848_02680 PF05746 DALR anticodon binding domain FR848_02695 PF01848 Hok/gef family FR848_02700 PF00005 ABC transporter FR848_02700 PF12848 ABC transporter FR848_02705 PF00313 'Cold-shock' DNA-binding domain FR848_02710 PF01381 Helix-turn-helix FR848_02715 PF07690 Major Facilitator Superfamily FR848_02720 PF11254 Protein of unknown function (DUF3053) FR848_02725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_02725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_02735 PF00294 pfkB family carbohydrate kinase FR848_02745 PF00356 Bacterial regulatory proteins, lacI family FR848_02750 PF13488 Glycine zipper FR848_02750 PF00691 OmpA family FR848_02760 PF18364 Molybdopterin oxidoreductase N-terminal domain FR848_02760 PF01568 Molydopterin dinucleotide binding domain FR848_02760 PF00384 Molybdopterin oxidoreductase FR848_02765 PF00583 Acetyltransferase (GNAT) family FR848_02770 PF03352 Methyladenine glycosylase FR848_02775 PF03797 Autotransporter beta-domain FR848_02780 PF07690 Major Facilitator Superfamily FR848_02785 PF00884 Sulfatase FR848_02785 PF08019 Phosphoethanolamine transferase EptA/EptB FR848_02800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_02805 PF00528 Binding-protein-dependent transport system inner membrane component FR848_02810 PF12911 N-terminal TM domain of oligopeptide transport permease C FR848_02810 PF00528 Binding-protein-dependent transport system inner membrane component FR848_02815 PF00005 ABC transporter FR848_02815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_02820 PF00005 ABC transporter FR848_02820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_02830 PF10609 NUBPL iron-transfer P-loop NTPase FR848_02835 PF00535 Glycosyl transferase family 2 FR848_02835 PF07238 PilZ domain FR848_02835 PF03170 Bacterial cellulose synthase subunit FR848_02840 PF03170 Bacterial cellulose synthase subunit FR848_02845 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FR848_02855 PF01270 Glycosyl hydrolases family 8 FR848_02860 PF13940 Toxin Ldr, type I toxin-antitoxin system FR848_02865 PF13940 Toxin Ldr, type I toxin-antitoxin system FR848_02870 PF13940 Toxin Ldr, type I toxin-antitoxin system FR848_02875 PF11658 Cellulose biosynthesis protein BcsG FR848_02880 PF11120 Cellulose biosynthesis protein BcsF FR848_02885 PF10995 Cellulose biosynthesis GIL FR848_02890 PF10945 Cellulose biosynthesis protein BcsR FR848_02895 PF06564 Cellulose biosynthesis protein BcsQ FR848_02900 PF07238 PilZ domain FR848_02900 PF00535 Glycosyl transferase family 2 FR848_02905 PF07282 Putative transposase DNA-binding domain FR848_02905 PF12323 Helix-turn-helix domain FR848_02905 PF01385 Probable transposase FR848_02910 PF03170 Bacterial cellulose synthase subunit FR848_02915 PF01270 Glycosyl hydrolases family 8 FR848_02920 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FR848_02930 PF00563 EAL domain FR848_02930 PF00990 Diguanylate cyclase, GGDEF domain FR848_02930 PF00672 HAMP domain FR848_02930 PF17154 Gammaproteobacterial periplasmic sensor domain FR848_02935 PF00375 Sodium:dicarboxylate symporter family FR848_02940 PF00675 Insulinase (Peptidase family M16) FR848_02940 PF05193 Peptidase M16 inactive domain FR848_02945 PF00294 pfkB family carbohydrate kinase FR848_02955 PF05170 AsmA family FR848_02960 PF07690 Major Facilitator Superfamily FR848_02960 PF00083 Sugar (and other) transporter FR848_02965 PF03631 Virulence factor BrkB FR848_02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_02970 PF03466 LysR substrate binding domain FR848_02980 PF00196 Bacterial regulatory proteins, luxR family FR848_02995 PF01204 Trehalase FR848_03000 PF00465 Iron-containing alcohol dehydrogenase FR848_03005 PF13417 Glutathione S-transferase, N-terminal domain FR848_03005 PF00043 Glutathione S-transferase, C-terminal domain FR848_03010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR848_03010 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_03015 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FR848_03020 PF01569 PAP2 superfamily FR848_03025 PF00512 His Kinase A (phospho-acceptor) domain FR848_03025 PF00672 HAMP domain FR848_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_03030 PF00486 Transcriptional regulatory protein, C terminal FR848_03030 PF00072 Response regulator receiver domain FR848_03035 PF01272 Transcription elongation factor, GreA/GreB, C-term FR848_03035 PF03449 Transcription elongation factor, N-terminal FR848_03040 PF17674 HHH domain FR848_03040 PF09371 Tex-like protein N-terminal domain FR848_03040 PF00575 S1 RNA binding domain FR848_03040 PF16921 Tex protein YqgF-like domain FR848_03045 PF04023 FeoA domain FR848_03050 PF07664 Ferrous iron transport protein B C terminus FR848_03050 PF17910 FeoB cytosolic helical domain FR848_03050 PF07670 Nucleoside recognition FR848_03050 PF02421 Ferrous iron transport protein B FR848_03055 PF09012 FeoC like transcriptional regulator FR848_03065 PF00561 alpha/beta hydrolase fold FR848_03070 PF00156 Phosphoribosyl transferase domain FR848_03075 PF01521 Iron-sulphur cluster biosynthesis FR848_03075 PF01106 NifU-like domain FR848_03080 PF02447 GntP family permease FR848_03085 PF01432 Peptidase family M3 FR848_03090 PF04445 Putative SAM-dependent methyltransferase FR848_03095 PF00854 POT family FR848_03100 PF00582 Universal stress protein family FR848_03105 PF10625 Universal stress protein B (UspB) FR848_03110 PF01384 Phosphate transporter family FR848_03120 PF02954 Bacterial regulatory protein, Fis family FR848_03120 PF00072 Response regulator receiver domain FR848_03120 PF00158 Sigma-54 interaction domain FR848_03125 PF01979 Amidohydrolase family FR848_03130 PF00939 Sodium:sulfate symporter transmembrane region FR848_03135 PF03737 Aldolase/RraA FR848_03140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_03140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_03140 PF01842 ACT domain FR848_03150 PF00571 CBS domain FR848_03150 PF03448 MgtE intracellular N domain FR848_03150 PF01769 Divalent cation transporter FR848_03160 PF01402 Ribbon-helix-helix protein, copG family FR848_03160 PF08753 NikR C terminal nickel binding domain FR848_03165 PF00005 ABC transporter FR848_03170 PF00005 ABC transporter FR848_03175 PF00528 Binding-protein-dependent transport system inner membrane component FR848_03180 PF00528 Binding-protein-dependent transport system inner membrane component FR848_03185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_03195 PF03466 LysR substrate binding domain FR848_03195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_03200 PF05870 Phenolic acid decarboxylase (PAD) FR848_03205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FR848_03210 PF00535 Glycosyl transferase family 2 FR848_03215 PF01370 NAD dependent epimerase/dehydratase family FR848_03215 PF02911 Formyl transferase, C-terminal domain FR848_03215 PF00551 Formyl transferase FR848_03220 PF01522 Polysaccharide deacetylase FR848_03225 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FR848_03230 PF00892 EamA-like transporter family FR848_03240 PF01594 AI-2E family transporter FR848_03245 PF07690 Major Facilitator Superfamily FR848_03250 PF08786 DcrB FR848_03255 PF02592 Putative vitamin uptake transporter FR848_03260 PF01206 Sulfurtransferase TusA FR848_03265 PF00403 Heavy-metal-associated domain FR848_03270 PF07947 YhhN family FR848_03275 PF10694 Protein of unknown function (DUF2500) FR848_03280 PF06611 Protein of unknown function (DUF1145) FR848_03290 PF02881 SRP54-type protein, helical bundle domain FR848_03290 PF00448 SRP54-type protein, GTPase domain FR848_03295 PF00005 ABC transporter FR848_03300 PF02687 FtsX-like permease family FR848_03300 PF18075 FtsX extracellular domain FR848_03305 PF04545 Sigma-70, region 4 FR848_03305 PF04542 Sigma-70 region 2 FR848_03310 PF00155 Aminotransferase class I and II FR848_03310 PF00392 Bacterial regulatory proteins, gntR family FR848_03315 PF00202 Aminotransferase class-III FR848_03325 PF13458 Periplasmic binding protein FR848_03330 PF12568 Acetyltransferase (GNAT) domain, PanZ FR848_03340 PF13458 Periplasmic binding protein FR848_03345 PF02653 Branched-chain amino acid transport system / permease component FR848_03350 PF11862 Domain of unknown function (DUF3382) FR848_03350 PF02653 Branched-chain amino acid transport system / permease component FR848_03355 PF00005 ABC transporter FR848_03355 PF12399 Branched-chain amino acid ATP-binding cassette transporter FR848_03360 PF00005 ABC transporter FR848_03365 PF08666 SAF domain FR848_03365 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FR848_03370 PF07690 Major Facilitator Superfamily FR848_03375 PF00701 Dihydrodipicolinate synthetase family FR848_03380 PF09339 IclR helix-turn-helix domain FR848_03380 PF01614 Bacterial transcriptional regulator FR848_03385 PF13416 Bacterial extracellular solute-binding protein FR848_03390 PF00528 Binding-protein-dependent transport system inner membrane component FR848_03395 PF00528 Binding-protein-dependent transport system inner membrane component FR848_03400 PF17912 MalK OB fold domain FR848_03400 PF00005 ABC transporter FR848_03405 PF03009 Glycerophosphoryl diester phosphodiesterase family FR848_03410 PF10956 Protein of unknown function (DUF2756) FR848_03420 PF00583 Acetyltransferase (GNAT) family FR848_03430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_03430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_03435 PF17954 Quercetinase C-terminal cupin domain FR848_03435 PF02678 Pirin FR848_03440 PF00356 Bacterial regulatory proteins, lacI family FR848_03440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR848_03445 PF01202 Shikimate kinase FR848_03450 PF02447 GntP family permease FR848_03460 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR848_03460 PF02774 Semialdehyde dehydrogenase, dimerisation domain FR848_03465 PF02806 Alpha amylase, C-terminal all-beta domain FR848_03465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR848_03465 PF00128 Alpha amylase, catalytic domain FR848_03470 PF18390 Glycogen debranching enzyme C-terminal domain FR848_03470 PF00128 Alpha amylase, catalytic domain FR848_03470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR848_03475 PF00483 Nucleotidyl transferase FR848_03480 PF08323 Starch synthase catalytic domain FR848_03480 PF00534 Glycosyl transferases group 1 FR848_03485 PF00343 Carbohydrate phosphorylase FR848_03490 PF01266 FAD dependent oxidoreductase FR848_03490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FR848_03495 PF00581 Rhodanese-like domain FR848_03500 PF01694 Rhomboid family FR848_03500 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FR848_03505 PF08220 DeoR-like helix-turn-helix domain FR848_03505 PF00455 DeoR C terminal sensor domain FR848_03510 PF00196 Bacterial regulatory proteins, luxR family FR848_03510 PF17874 MalT-like TPR region FR848_03520 PF00343 Carbohydrate phosphorylase FR848_03525 PF02446 4-alpha-glucanotransferase FR848_03530 PF01293 Phosphoenolpyruvate carboxykinase FR848_03535 PF01430 Hsp33 protein FR848_03540 PF01479 S4 domain FR848_03545 PF13419 Haloacid dehalogenase-like hydrolase FR848_03550 PF07095 Intracellular growth attenuator protein IgaA FR848_03555 PF00293 NUDIX domain FR848_03560 PF17092 Penicillin-binding protein OB-like domain FR848_03560 PF00912 Transglycosylase FR848_03560 PF00905 Penicillin binding protein transpeptidase domain FR848_03585 PF03958 Bacterial type II/III secretion system short domain FR848_03585 PF00263 Bacterial type II and III secretion system protein FR848_03590 PF01202 Shikimate kinase FR848_03595 PF01761 3-dehydroquinate synthase FR848_03600 PF05036 Sporulation related domain FR848_03605 PF02086 D12 class N6 adenine-specific DNA methyltransferase FR848_03610 PF00834 Ribulose-phosphate 3 epimerase family FR848_03615 PF13419 Haloacid dehalogenase-like hydrolase FR848_03620 PF00579 tRNA synthetases class I (W and Y) FR848_03625 PF10414 Sirohaem synthase dimerisation region FR848_03625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR848_03625 PF14824 Sirohaem biosynthesis protein central FR848_03630 PF01226 Formate/nitrite transporter FR848_03635 PF13806 Rieske-like [2Fe-2S] domain FR848_03640 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_03640 PF18267 Rubredoxin NAD+ reductase C-terminal domain FR848_03640 PF04324 BFD-like [2Fe-2S] binding domain FR848_03640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FR848_03640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FR848_03645 PF07969 Amidohydrolase family FR848_03650 PF07690 Major Facilitator Superfamily FR848_03655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FR848_03660 PF10832 Protein of unknown function (DUF2559) FR848_03665 PF02661 Fic/DOC family FR848_03670 PF00117 Glutamine amidotransferase class-I FR848_03675 PF00202 Aminotransferase class-III FR848_03680 PF12805 FUSC-like inner membrane protein yccS FR848_03685 PF00027 Cyclic nucleotide-binding domain FR848_03685 PF13545 Crp-like helix-turn-helix domain FR848_03690 PF02566 OsmC-like protein FR848_03695 PF00485 Phosphoribulokinase / Uridine kinase family FR848_03700 PF06794 Uncharacterised protein family (UPF0270) FR848_03705 PF00561 alpha/beta hydrolase fold FR848_03715 PF14572 Phosphoribosyl synthetase-associated domain FR848_03715 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FR848_03720 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FR848_03725 PF12848 ABC transporter FR848_03725 PF00005 ABC transporter FR848_03730 PF02525 Flavodoxin-like fold FR848_03735 PF02254 TrkA-N domain FR848_03735 PF00999 Sodium/hydrogen exchanger family FR848_03740 PF09526 Probable metal-binding protein (DUF2387) FR848_03745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR848_03750 PF04102 SlyX FR848_03755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR848_03755 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FR848_03760 PF13309 HTH domain FR848_03760 PF08348 YheO-like PAS domain FR848_03765 PF02635 DsrE/DsrF-like family FR848_03770 PF02635 DsrE/DsrF-like family FR848_03775 PF04077 DsrH like protein FR848_03780 PF00164 Ribosomal protein S12/S23 FR848_03785 PF00177 Ribosomal protein S7p/S5e FR848_03790 PF00679 Elongation factor G C-terminus FR848_03790 PF03144 Elongation factor Tu domain 2 FR848_03790 PF00009 Elongation factor Tu GTP binding domain FR848_03790 PF03764 Elongation factor G, domain IV FR848_03790 PF14492 Elongation Factor G, domain II FR848_03795 PF03144 Elongation factor Tu domain 2 FR848_03795 PF03143 Elongation factor Tu C-terminal domain FR848_03795 PF00009 Elongation factor Tu GTP binding domain FR848_03800 PF04324 BFD-like [2Fe-2S] binding domain FR848_03805 PF00210 Ferritin-like domain FR848_03810 PF01478 Type IV leader peptidase family FR848_03815 PF00338 Ribosomal protein S10p/S20e FR848_03820 PF00297 Ribosomal protein L3 FR848_03825 PF00573 Ribosomal protein L4/L1 family FR848_03830 PF00276 Ribosomal protein L23 FR848_03835 PF03947 Ribosomal Proteins L2, C-terminal domain FR848_03835 PF00181 Ribosomal Proteins L2, RNA binding domain FR848_03840 PF00203 Ribosomal protein S19 FR848_03845 PF00237 Ribosomal protein L22p/L17e FR848_03850 PF07650 KH domain FR848_03850 PF00189 Ribosomal protein S3, C-terminal domain FR848_03855 PF00252 Ribosomal protein L16p/L10e FR848_03860 PF00831 Ribosomal L29 protein FR848_03865 PF00366 Ribosomal protein S17 FR848_03870 PF00238 Ribosomal protein L14p/L23e FR848_03875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FR848_03875 PF00467 KOW motif FR848_03880 PF00281 Ribosomal protein L5 FR848_03880 PF00673 ribosomal L5P family C-terminus FR848_03885 PF00253 Ribosomal protein S14p/S29e FR848_03890 PF00410 Ribosomal protein S8 FR848_03895 PF00347 Ribosomal protein L6 FR848_03900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FR848_03905 PF03719 Ribosomal protein S5, C-terminal domain FR848_03905 PF00333 Ribosomal protein S5, N-terminal domain FR848_03910 PF00327 Ribosomal protein L30p/L7e FR848_03915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FR848_03920 PF00344 SecY translocase FR848_03925 PF00444 Ribosomal protein L36 FR848_03930 PF00416 Ribosomal protein S13/S18 FR848_03935 PF00411 Ribosomal protein S11 FR848_03940 PF01479 S4 domain FR848_03940 PF00163 Ribosomal protein S4/S9 N-terminal domain FR848_03945 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FR848_03945 PF01000 RNA polymerase Rpb3/RpoA insert domain FR848_03945 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FR848_03950 PF01196 Ribosomal protein L17 FR848_03955 PF09350 Domain of unknown function (DUF1992) FR848_03960 PF13411 MerR HTH family regulatory protein FR848_03965 PF03889 Alternative ribosome-rescue factor A FR848_03970 PF01741 Large-conductance mechanosensitive channel, MscL FR848_03975 PF02080 TrkA-C domain FR848_03975 PF02254 TrkA-N domain FR848_03980 PF01189 16S rRNA methyltransferase RsmB/F FR848_03980 PF01029 NusB family FR848_03985 PF02911 Formyl transferase, C-terminal domain FR848_03985 PF00551 Formyl transferase FR848_03990 PF01327 Polypeptide deformylase FR848_03995 PF02481 DNA recombination-mediator protein A FR848_03995 PF17782 DprA winged helix domain FR848_04000 PF04361 Protein of unknown function (DUF494) FR848_04005 PF01396 Topoisomerase DNA binding C4 zinc finger FR848_04010 PF01300 Telomere recombination FR848_04015 PF08501 Shikimate dehydrogenase substrate binding domain FR848_04015 PF01488 Shikimate / quinate 5-dehydrogenase FR848_04015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FR848_04020 PF07369 Protein of unknown function (DUF1488) FR848_04025 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_04065 PF00873 AcrB/AcrD/AcrF family FR848_04070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_04070 PF00529 HlyD membrane-fusion protein of T1SS FR848_04075 PF08361 MAATS-type transcriptional repressor, C-terminal region FR848_04075 PF00440 Bacterial regulatory proteins, tetR family FR848_04080 PF02954 Bacterial regulatory protein, Fis family FR848_04085 PF01207 Dihydrouridine synthase (Dus) FR848_04090 PF00194 Eukaryotic-type carbonic anhydrase FR848_04100 PF00474 Sodium:solute symporter family FR848_04105 PF06196 Protein of unknown function (DUF997) FR848_04110 PF02785 Biotin carboxylase C-terminal domain FR848_04110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FR848_04110 PF00289 Biotin carboxylase, N-terminal domain FR848_04115 PF00364 Biotin-requiring enzyme FR848_04120 PF01794 Ferric reductase like transmembrane component FR848_04125 PF00174 Oxidoreductase molybdopterin binding domain FR848_04130 PF00107 Zinc-binding dehydrogenase FR848_04130 PF08240 Alcohol dehydrogenase GroES-like domain FR848_04135 PF00990 Diguanylate cyclase, GGDEF domain FR848_04135 PF17157 Gammaproteobacterial periplasmic sensor domain FR848_04135 PF00563 EAL domain FR848_04145 PF04085 rod shape-determining protein MreC FR848_04150 PF04093 rod shape-determining protein MreD FR848_04155 PF02545 Maf-like protein FR848_04160 PF10150 Ribonuclease E/G family FR848_04160 PF00575 S1 RNA binding domain FR848_04165 PF13502 AsmA-like C-terminal region FR848_04165 PF13116 Protein of unknown function FR848_04170 PF01523 Putative modulator of DNA gyrase FR848_04175 PF08220 DeoR-like helix-turn-helix domain FR848_04175 PF00455 DeoR C terminal sensor domain FR848_04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_04180 PF03466 LysR substrate binding domain FR848_04185 PF07869 Protein of unknown function (DUF1656) FR848_04190 PF13533 Biotin-lipoyl like FR848_04195 PF04632 Fusaric acid resistance protein family FR848_04200 PF01337 Barstar (barnase inhibitor) FR848_04205 PF07338 Protein of unknown function (DUF1471) FR848_04210 PF07338 Protein of unknown function (DUF1471) FR848_04215 PF02863 Arginine repressor, C-terminal domain FR848_04215 PF01316 Arginine repressor, DNA binding domain FR848_04220 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FR848_04220 PF00056 lactate/malate dehydrogenase, NAD binding domain FR848_04225 PF07729 FCD domain FR848_04225 PF00392 Bacterial regulatory proteins, gntR family FR848_04235 PF00939 Sodium:sulfate symporter transmembrane region FR848_04240 PF05681 Fumarate hydratase (Fumerase) FR848_04245 PF05683 Fumarase C-terminus FR848_04250 PF04277 Oxaloacetate decarboxylase, gamma chain FR848_04255 PF00364 Biotin-requiring enzyme FR848_04255 PF00682 HMGL-like FR848_04255 PF02436 Conserved carboxylase domain FR848_04260 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FR848_04265 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FR848_04270 PF13180 PDZ domain FR848_04275 PF13180 PDZ domain FR848_04275 PF00595 PDZ domain FR848_04280 PF06295 Protein of unknown function (DUF1043) FR848_04285 PF03969 AFG1-like ATPase FR848_04290 PF00572 Ribosomal protein L13 FR848_04295 PF00380 Ribosomal protein S9/S16 FR848_04300 PF02798 Glutathione S-transferase, N-terminal domain FR848_04300 PF00043 Glutathione S-transferase, C-terminal domain FR848_04305 PF04386 Stringent starvation protein B FR848_04310 PF00392 Bacterial regulatory proteins, gntR family FR848_04310 PF07729 FCD domain FR848_04315 PF00701 Dihydrodipicolinate synthetase family FR848_04320 PF07690 Major Facilitator Superfamily FR848_04325 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FR848_04330 PF00480 ROK family FR848_04335 PF04074 YhcH/YjgK/YiaL FR848_04340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FR848_04340 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_04345 PF01645 Conserved region in glutamate synthase FR848_04345 PF01493 GXGXG motif FR848_04345 PF04898 Glutamate synthase central domain FR848_04345 PF00310 Glutamine amidotransferases class-II FR848_04355 PF04055 Radical SAM superfamily FR848_04355 PF16199 Radical_SAM C-terminal domain FR848_04360 PF01627 Hpt domain FR848_04360 PF00512 His Kinase A (phospho-acceptor) domain FR848_04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_04360 PF18415 Histidine kinase receptor ArcB trans-membrane domain FR848_04360 PF00989 PAS fold FR848_04360 PF00072 Response regulator receiver domain FR848_04370 PF00912 Transglycosylase FR848_04375 PF00381 PTS HPr component phosphorylation site FR848_04380 PF03668 P-loop ATPase protein family FR848_04385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_04390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FR848_04395 PF04552 Sigma-54, DNA binding domain FR848_04395 PF04963 Sigma-54 factor, core binding domain FR848_04395 PF00309 Sigma-54 factor, Activator interacting domain (AID) FR848_04400 PF12399 Branched-chain amino acid ATP-binding cassette transporter FR848_04400 PF00005 ABC transporter FR848_04405 PF03968 OstA-like protein FR848_04410 PF06835 Lipopolysaccharide-assembly, LptC-related FR848_04420 PF01380 SIS domain FR848_04420 PF00571 CBS domain FR848_04425 PF01699 Sodium/calcium exchanger protein FR848_04430 PF00005 ABC transporter FR848_04435 PF02405 Permease MlaE FR848_04440 PF02470 MlaD protein FR848_04445 PF05494 MlaC protein FR848_04450 PF13466 STAS domain FR848_04455 PF01722 BolA-like protein FR848_04460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FR848_04465 PF13693 Winged helix-turn-helix DNA-binding FR848_04470 PF00348 Polyprenyl synthetase FR848_04475 PF00829 Ribosomal prokaryotic L21 protein FR848_04480 PF01016 Ribosomal L27 protein FR848_04485 PF00892 EamA-like transporter family FR848_04490 PF01926 50S ribosome-binding GTPase FR848_04490 PF01018 GTP1/OBG FR848_04495 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FR848_04500 PF03449 Transcription elongation factor, N-terminal FR848_04500 PF01272 Transcription elongation factor, GreA/GreB, C-term FR848_04505 PF01985 CRS1 / YhbY (CRM) domain FR848_04510 PF01728 FtsJ-like methyltransferase FR848_04515 PF00004 ATPase family associated with various cellular activities (AAA) FR848_04515 PF17862 AAA+ lid domain FR848_04515 PF06480 FtsH Extracellular FR848_04515 PF01434 Peptidase family M41 FR848_04520 PF00809 Pterin binding enzyme FR848_04525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FR848_04525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FR848_04525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FR848_04525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FR848_04530 PF03840 Preprotein translocase SecG subunit FR848_04540 PF00764 Arginosuccinate synthase FR848_04550 PF17384 RimP C-terminal SH3 domain FR848_04550 PF02576 RimP N-terminal domain FR848_04555 PF00575 S1 RNA binding domain FR848_04555 PF08529 NusA N-terminal domain FR848_04555 PF13184 NusA-like KH domain FR848_04560 PF08364 Bacterial translation initiation factor IF-2 associated region FR848_04560 PF04760 Translation initiation factor IF-2, N-terminal region FR848_04560 PF11987 Translation-initiation factor 2 FR848_04560 PF00009 Elongation factor Tu GTP binding domain FR848_04565 PF02033 Ribosome-binding factor A FR848_04570 PF01509 TruB family pseudouridylate synthase (N terminal domain) FR848_04570 PF16198 tRNA pseudouridylate synthase B C-terminal domain FR848_04570 PF09157 Pseudouridine synthase II TruB, C-terminal FR848_04575 PF00312 Ribosomal protein S15 FR848_04580 PF00575 S1 RNA binding domain FR848_04580 PF00013 KH domain FR848_04580 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FR848_04580 PF01138 3' exoribonuclease family, domain 1 FR848_04580 PF03725 3' exoribonuclease family, domain 2 FR848_04585 PF13181 Tetratricopeptide repeat FR848_04585 PF07719 Tetratricopeptide repeat FR848_04595 PF00271 Helicase conserved C-terminal domain FR848_04595 PF12343 Cold shock protein DEAD box A FR848_04595 PF00270 DEAD/DEAH box helicase FR848_04595 PF03880 DbpA RNA binding domain FR848_04600 PF03222 Tryptophan/tyrosine permease family FR848_04605 PF00296 Luciferase-like monooxygenase FR848_04625 PF13508 Acetyltransferase (GNAT) domain FR848_04630 PF01541 GIY-YIG catalytic domain FR848_04640 PF01965 DJ-1/PfpI family FR848_04645 PF13460 NAD(P)H-binding FR848_04650 PF03773 Predicted permease FR848_04655 PF04972 BON domain FR848_04660 PF13580 SIS domain FR848_04665 PF02021 Uncharacterised protein family UPF0102 FR848_04670 PF04348 LppC putative lipoprotein FR848_04675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR848_04685 PF01116 Fructose-bisphosphate aldolase class-II FR848_04690 PF01380 SIS domain FR848_04695 PF01979 Amidohydrolase family FR848_04700 PF03610 PTS system fructose IIA component FR848_04705 PF03613 PTS system mannose/fructose/sorbose family IID component FR848_04710 PF03609 PTS system sorbose-specific iic component FR848_04715 PF03830 PTS system sorbose subfamily IIB component FR848_04720 PF08013 Tagatose 6 phosphate kinase FR848_04725 PF08220 DeoR-like helix-turn-helix domain FR848_04725 PF00455 DeoR C terminal sensor domain FR848_04730 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FR848_04730 PF08666 SAF domain FR848_04735 PF07690 Major Facilitator Superfamily FR848_04740 PF03328 HpcH/HpaI aldolase/citrate lyase family FR848_04745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FR848_04745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FR848_04750 PF02595 Glycerate kinase family FR848_04765 PF02678 Pirin FR848_04765 PF17954 Quercetinase C-terminal cupin domain FR848_04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_04770 PF03466 LysR substrate binding domain FR848_04775 PF05656 Protein of unknown function (DUF805) FR848_04780 PF13409 Glutathione S-transferase, N-terminal domain FR848_04785 PF07681 DoxX FR848_04790 PF13997 YqjK-like protein FR848_04795 PF07332 Putative Actinobacterial Holin-X, holin superfamily III FR848_04800 PF05957 Bacterial protein of unknown function (DUF883) FR848_04805 PF06476 Protein of unknown function (DUF1090) FR848_04810 PF13721 SecD export protein N-terminal TM region FR848_04815 PF09335 SNARE associated Golgi protein FR848_04820 PF07729 FCD domain FR848_04820 PF00392 Bacterial regulatory proteins, gntR family FR848_04825 PF07690 Major Facilitator Superfamily FR848_04830 PF02614 Glucuronate isomerase FR848_04835 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FR848_04835 PF08666 SAF domain FR848_04840 PF10688 Bacterial inner membrane protein FR848_04845 PF00375 Sodium:dicarboxylate symporter family FR848_04850 PF03741 Integral membrane protein TerC family FR848_04855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_04860 PF01863 Protein of unknown function DUF45 FR848_04865 PF04616 Glycosyl hydrolases family 43 FR848_04865 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FR848_04880 PF05175 Methyltransferase small domain FR848_04885 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_04885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR848_04890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_04890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_04895 PF04198 Putative sugar-binding domain FR848_04900 PF00005 ABC transporter FR848_04905 PF02653 Branched-chain amino acid transport system / permease component FR848_04910 PF02653 Branched-chain amino acid transport system / permease component FR848_04915 PF13407 Periplasmic binding protein domain FR848_04920 PF01791 DeoC/LacD family aldolase FR848_04925 PF03992 Antibiotic biosynthesis monooxygenase FR848_04930 PF01204 Trehalase FR848_04940 PF13520 Amino acid permease FR848_04945 PF13520 Amino acid permease FR848_04950 PF04074 YhcH/YjgK/YiaL FR848_04955 PF02837 Glycosyl hydrolases family 2, sugar binding domain FR848_04955 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FR848_04955 PF00703 Glycosyl hydrolases family 2 FR848_04955 PF16353 Domain of unknown function(DUF4981) FR848_04955 PF02929 Beta galactosidase small chain FR848_04965 PF00356 Bacterial regulatory proteins, lacI family FR848_04970 PF01588 Putative tRNA binding domain FR848_04975 PF00202 Aminotransferase class-III FR848_04980 PF03551 Transcriptional regulator PadR-like family FR848_04985 PF08021 Siderophore-interacting FAD-binding domain FR848_04985 PF04954 Siderophore-interacting protein FR848_04990 PF02733 Dak1 domain FR848_04990 PF02734 DAK2 domain FR848_04995 PF00391 PEP-utilising enzyme, mobile domain FR848_04995 PF03610 PTS system fructose IIA component FR848_04995 PF05524 PEP-utilising enzyme, N-terminal FR848_04995 PF00381 PTS HPr component phosphorylation site FR848_05000 PF02734 DAK2 domain FR848_05005 PF02733 Dak1 domain FR848_05010 PF00465 Iron-containing alcohol dehydrogenase FR848_05015 PF00158 Sigma-54 interaction domain FR848_05015 PF00989 PAS fold FR848_05015 PF02954 Bacterial regulatory protein, Fis family FR848_05020 PF08986 Domain of unknown function (DUF1889) FR848_05030 PF03167 Uracil DNA glycosylase superfamily FR848_05035 PF08361 MAATS-type transcriptional repressor, C-terminal region FR848_05035 PF00440 Bacterial regulatory proteins, tetR family FR848_05040 PF04542 Sigma-70 region 2 FR848_05040 PF00140 Sigma-70 factor, region 1.2 FR848_05040 PF04539 Sigma-70 region 3 FR848_05040 PF03979 Sigma-70 factor, region 1.1 FR848_05040 PF04546 Sigma-70, non-essential region FR848_05040 PF04545 Sigma-70, region 4 FR848_05045 PF08278 DNA primase DnaG DnaB-binding FR848_05045 PF08275 DNA primase catalytic core, N-terminal domain FR848_05045 PF01807 CHC2 zinc finger FR848_05045 PF10410 DnaB-helicase binding domain of primase FR848_05050 PF01165 Ribosomal protein S21 FR848_05055 PF00814 Glycoprotease family FR848_05065 PF02492 CobW/HypB/UreG, nucleotide-binding domain FR848_05070 PF01730 UreF FR848_05075 PF05194 UreE urease accessory protein, C-terminal domain FR848_05075 PF02814 UreE urease accessory protein, N-terminal domain FR848_05080 PF01979 Amidohydrolase family FR848_05080 PF00449 Urease alpha-subunit, N-terminal domain FR848_05085 PF00699 Urease beta subunit FR848_05090 PF00547 Urease, gamma subunit FR848_05095 PF01774 UreD urease accessory protein FR848_05100 PF02660 Glycerol-3-phosphate acyltransferase FR848_05105 PF02152 Dihydroneopterin aldolase FR848_05110 PF02673 Bacitracin resistance protein BacA FR848_05115 PF01743 Poly A polymerase head domain FR848_05115 PF01966 HD domain FR848_05115 PF12627 Probable RNA and SrmB- binding site of polymerase A FR848_05120 PF08239 Bacterial SH3 domain FR848_05125 PF01928 CYTH domain FR848_05130 PF03710 Glutamate-ammonia ligase adenylyltransferase FR848_05130 PF08335 GlnD PII-uridylyltransferase FR848_05135 PF01467 Cytidylyltransferase-like FR848_05135 PF00294 pfkB family carbohydrate kinase FR848_05140 PF08971 Glycogen synthesis protein FR848_05145 PF04380 Membrane fusogenic activity FR848_05150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FR848_05160 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_05160 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_05165 PF13953 PapC C-terminal domain FR848_05165 PF13954 PapC N-terminal domain FR848_05165 PF00577 Outer membrane usher protein FR848_05170 PF00419 Fimbrial protein FR848_05175 PF02535 ZIP Zinc transporter FR848_05180 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FR848_05185 PF03738 Glutathionylspermidine synthase preATP-grasp FR848_05190 PF06693 Protein of unknown function (DUF1190) FR848_05195 PF02321 Outer membrane efflux protein FR848_05200 PF00293 NUDIX domain FR848_05205 PF06853 Protein of unknown function (DUF1249) FR848_05210 PF00149 Calcineurin-like phosphoesterase FR848_05215 PF05728 Uncharacterised protein family (UPF0227) FR848_05220 PF01751 Toprim domain FR848_05220 PF00204 DNA gyrase B FR848_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_05220 PF00986 DNA gyrase B subunit, carboxyl terminus FR848_05225 PF03992 Antibiotic biosynthesis monooxygenase FR848_05230 PF02525 Flavodoxin-like fold FR848_05235 PF08521 Two-component sensor kinase N-terminal FR848_05235 PF00512 His Kinase A (phospho-acceptor) domain FR848_05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_05240 PF00072 Response regulator receiver domain FR848_05240 PF00486 Transcriptional regulatory protein, C terminal FR848_05245 PF04076 Bacterial OB fold (BOF) protein FR848_05250 PF06445 GyrI-like small molecule binding domain FR848_05255 PF00521 DNA gyrase/topoisomerase IV, subunit A FR848_05255 PF03989 DNA gyrase C-terminal domain, beta-propeller FR848_05260 PF01553 Acyltransferase FR848_05265 PF00394 Multicopper oxidase FR848_05265 PF07731 Multicopper oxidase FR848_05265 PF07732 Multicopper oxidase FR848_05270 PF08497 Radical SAM N-terminal FR848_05270 PF04055 Radical SAM superfamily FR848_05270 PF11842 Domain of unknown function (DUF3362) FR848_05310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR848_05315 PF03466 LysR substrate binding domain FR848_05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_05320 PF00753 Metallo-beta-lactamase superfamily FR848_05325 PF00892 EamA-like transporter family FR848_05350 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FR848_05350 PF08240 Alcohol dehydrogenase GroES-like domain FR848_05360 PF17755 UvrA DNA-binding domain FR848_05380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FR848_05405 PF00756 Putative esterase FR848_05415 PF00107 Zinc-binding dehydrogenase FR848_05415 PF08240 Alcohol dehydrogenase GroES-like domain FR848_05420 PF02583 Metal-sensitive transcriptional repressor FR848_05430 PF00107 Zinc-binding dehydrogenase FR848_05430 PF08240 Alcohol dehydrogenase GroES-like domain FR848_05465 PF08497 Radical SAM N-terminal FR848_05465 PF04055 Radical SAM superfamily FR848_05465 PF11842 Domain of unknown function (DUF3362) FR848_05475 PF00248 Aldo/keto reductase family FR848_05480 PF00465 Iron-containing alcohol dehydrogenase FR848_05485 PF12833 Helix-turn-helix domain FR848_05485 PF06719 AraC-type transcriptional regulator N-terminus FR848_05490 PF09335 SNARE associated Golgi protein FR848_05495 PF01053 Cys/Met metabolism PLP-dependent enzyme FR848_05500 PF01618 MotA/TolQ/ExbB proton channel family FR848_05505 PF02472 Biopolymer transport protein ExbD/TolR FR848_05510 PF03350 Uncharacterized protein family, UPF0114 FR848_05515 PF01738 Dienelactone hydrolase family FR848_05520 PF11115 Protein of unknown function (DUF2623) FR848_05525 PF02798 Glutathione S-transferase, N-terminal domain FR848_05535 PF05257 CHAP domain FR848_05535 PF03738 Glutathionylspermidine synthase preATP-grasp FR848_05540 PF00155 Aminotransferase class I and II FR848_05550 PF13350 Tyrosine phosphatase family FR848_05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_05565 PF03466 LysR substrate binding domain FR848_05570 PF01053 Cys/Met metabolism PLP-dependent enzyme FR848_05575 PF00571 CBS domain FR848_05575 PF00291 Pyridoxal-phosphate dependent enzyme FR848_05585 PF00939 Sodium:sulfate symporter transmembrane region FR848_05600 PF04474 Protein of unknown function (DUF554) FR848_05605 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FR848_05605 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FR848_05605 PF01276 Orn/Lys/Arg decarboxylase, major domain FR848_05610 PF03825 Nucleoside H+ symporter FR848_05615 PF01464 Transglycosylase SLT domain FR848_05615 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FR848_05620 PF04362 Bacterial Fe(2+) trafficking FR848_05625 PF10576 Iron-sulfur binding domain of endonuclease III FR848_05625 PF00633 Helix-hairpin-helix motif FR848_05625 PF14815 NUDIX domain FR848_05625 PF00730 HhH-GPD superfamily base excision DNA repair protein FR848_05630 PF02390 Putative methyltransferase FR848_05635 PF04320 Protein with unknown function (DUF469) FR848_05640 PF11101 Protein of unknown function (DUF2884) FR848_05645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FR848_05650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FR848_05655 PF03480 Bacterial extracellular solute-binding protein, family 7 FR848_05660 PF06969 HemN C-terminal domain FR848_05660 PF04055 Radical SAM superfamily FR848_05665 PF01725 Ham1 family FR848_05670 PF02594 Uncharacterised ACR, YggU family COG1872 FR848_05675 PF02325 YGGT family FR848_05680 PF01168 Alanine racemase, N-terminal domain FR848_05685 PF00437 Type II/IV secretion system protein FR848_05690 PF00196 Bacterial regulatory proteins, luxR family FR848_05695 PF03652 Holliday junction resolvase FR848_05700 PF02622 Uncharacterized ACR, COG1678 FR848_05705 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FR848_05705 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FR848_05710 PF04452 RNA methyltransferase FR848_05715 PF04231 Endonuclease I FR848_05720 PF10263 SprT-like family FR848_05720 PF17283 SprT-like zinc ribbon domain FR848_05725 PF00083 Sugar (and other) transporter FR848_05730 PF02773 S-adenosylmethionine synthetase, C-terminal domain FR848_05730 PF00438 S-adenosylmethionine synthetase, N-terminal domain FR848_05730 PF02772 S-adenosylmethionine synthetase, central domain FR848_05740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FR848_05740 PF17810 Arginine decarboxylase helical bundle domain FR848_05740 PF17944 Arginine decarboxylase C-terminal helical extension FR848_05745 PF00491 Arginase family FR848_05750 PF01435 Peptidase family M48 FR848_05755 PF00456 Transketolase, thiamine diphosphate binding domain FR848_05755 PF02779 Transketolase, pyrimidine binding domain FR848_05755 PF02780 Transketolase, C-terminal domain FR848_05760 PF00005 ABC transporter FR848_05765 PF00005 ABC transporter FR848_05785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR848_05785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR848_05790 PF00162 Phosphoglycerate kinase FR848_05795 PF01116 Fructose-bisphosphate aldolase class-II FR848_05800 PF00924 Mechanosensitive ion channel FR848_05800 PF05552 Conserved TM helix FR848_05805 PF01810 LysE type translocator FR848_05810 PF04402 Protein of unknown function (DUF541) FR848_05815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_05815 PF03466 LysR substrate binding domain FR848_05820 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FR848_05820 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FR848_05825 PF00378 Enoyl-CoA hydratase/isomerase FR848_05835 PF01642 Methylmalonyl-CoA mutase FR848_05835 PF02310 B12 binding domain FR848_05840 PF03466 LysR substrate binding domain FR848_05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_05845 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FR848_05850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_05850 PF01842 ACT domain FR848_05850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_05855 PF01812 5-formyltetrahydrofolate cyclo-ligase family FR848_05865 PF05164 Cell division protein ZapA FR848_05870 PF03695 Uncharacterised protein family (UPF0149) FR848_05875 PF00557 Metallopeptidase family M24 FR848_05875 PF05195 Aminopeptidase P, N-terminal domain FR848_05880 PF01494 FAD binding domain FR848_05885 PF01494 FAD binding domain FR848_05890 PF08669 Glycine cleavage T-protein C-terminal barrel domain FR848_05890 PF01571 Aminomethyltransferase folate-binding domain FR848_05895 PF01597 Glycine cleavage H-protein FR848_05900 PF02347 Glycine cleavage system P-protein FR848_05910 PF00578 AhpC/TSA family FR848_05915 PF00232 Glycosyl hydrolase family 1 FR848_05920 PF01418 Helix-turn-helix domain, rpiR family FR848_05920 PF01380 SIS domain FR848_05930 PF03006 Haemolysin-III related FR848_05935 PF07071 KDGP aldolase FR848_05940 PF03841 L-seryl-tRNA selenium transferase FR848_05945 PF03613 PTS system mannose/fructose/sorbose family IID component FR848_05950 PF03609 PTS system sorbose-specific iic component FR848_05955 PF03610 PTS system fructose IIA component FR848_05955 PF03830 PTS system sorbose subfamily IIB component FR848_05965 PF00874 PRD domain FR848_05965 PF00158 Sigma-54 interaction domain FR848_05970 PF01571 Aminomethyltransferase folate-binding domain FR848_05975 PF03937 Flavinator of succinate dehydrogenase FR848_05980 PF07254 Membrane-bound toxin component of toxin-antitoxin system FR848_05985 PF00258 Flavodoxin FR848_05990 PF02899 Phage integrase, N-terminal SAM-like domain FR848_05990 PF00589 Phage integrase family FR848_05995 PF13098 Thioredoxin-like domain FR848_05995 PF10411 Disulfide bond isomerase protein N-terminus FR848_06000 PF17768 RecJ OB domain FR848_06000 PF02272 DHHA1 domain FR848_06000 PF01368 DHH family FR848_06010 PF00152 tRNA synthetases class II (D, K and N) FR848_06010 PF01336 OB-fold nucleic acid binding domain FR848_06015 PF00293 NUDIX domain FR848_06020 PF04474 Protein of unknown function (DUF554) FR848_06025 PF02441 Flavoprotein FR848_06030 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FR848_06035 PF03466 LysR substrate binding domain FR848_06035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_06040 PF01476 LysM domain FR848_06040 PF01551 Peptidase family M23 FR848_06050 PF13356 Arm DNA-binding domain FR848_06050 PF00589 Phage integrase family FR848_06050 PF14659 Phage integrase, N-terminal SAM-like domain FR848_06060 PF00440 Bacterial regulatory proteins, tetR family FR848_06065 PF03466 LysR substrate binding domain FR848_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_06070 PF08240 Alcohol dehydrogenase GroES-like domain FR848_06070 PF00107 Zinc-binding dehydrogenase FR848_06085 PF00106 short chain dehydrogenase FR848_06090 PF07690 Major Facilitator Superfamily FR848_06095 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FR848_06120 PF13460 NAD(P)H-binding FR848_06120 PF11066 Protein of unknown function (DUF2867) FR848_06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_06125 PF03466 LysR substrate binding domain FR848_06130 PF00248 Aldo/keto reductase family FR848_06135 PF00248 Aldo/keto reductase family FR848_06165 PF00672 HAMP domain FR848_06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_06165 PF00512 His Kinase A (phospho-acceptor) domain FR848_06170 PF00072 Response regulator receiver domain FR848_06170 PF00486 Transcriptional regulatory protein, C terminal FR848_06175 PF00248 Aldo/keto reductase family FR848_06180 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FR848_06185 PF00881 Nitroreductase family FR848_06190 PF07690 Major Facilitator Superfamily FR848_06200 PF01022 Bacterial regulatory protein, arsR family FR848_06205 PF02040 Arsenical pump membrane protein FR848_06210 PF03960 ArsC family FR848_06215 PF07690 Major Facilitator Superfamily FR848_06230 PF05651 Putative sugar diacid recognition FR848_06230 PF17853 GGDEF-like domain FR848_06230 PF13556 PucR C-terminal helix-turn-helix domain FR848_06235 PF02595 Glycerate kinase family FR848_06245 PF08450 SMP-30/Gluconolactonase/LRE-like region FR848_06250 PF07690 Major Facilitator Superfamily FR848_06255 PF02803 Thiolase, C-terminal domain FR848_06255 PF00108 Thiolase, N-terminal domain FR848_06265 PF01144 Coenzyme A transferase FR848_06270 PF00501 AMP-binding enzyme FR848_06270 PF13193 AMP-binding enzyme C-terminal domain FR848_06280 PF07690 Major Facilitator Superfamily FR848_06285 PF00294 pfkB family carbohydrate kinase FR848_06290 PF00834 Ribulose-phosphate 3 epimerase family FR848_06295 PF00455 DeoR C terminal sensor domain FR848_06295 PF08220 DeoR-like helix-turn-helix domain FR848_06300 PF01791 DeoC/LacD family aldolase FR848_06305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_06305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_06310 PF08220 DeoR-like helix-turn-helix domain FR848_06310 PF00455 DeoR C terminal sensor domain FR848_06325 PF00854 POT family FR848_06330 PF00106 short chain dehydrogenase FR848_06335 PF17874 MalT-like TPR region FR848_06335 PF00196 Bacterial regulatory proteins, luxR family FR848_06340 PF02321 Outer membrane efflux protein FR848_06345 PF04632 Fusaric acid resistance protein family FR848_06350 PF00529 HlyD membrane-fusion protein of T1SS FR848_06350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_06355 PF17090 Uncharacterised protein family FR848_06360 PF06902 Divergent 4Fe-4S mono-cluster FR848_06365 PF14542 GCN5-related N-acetyl-transferase FR848_06370 PF01810 LysE type translocator FR848_06375 PF01037 Lrp/AsnC ligand binding domain FR848_06380 PF01047 MarR family FR848_06385 PF00892 EamA-like transporter family FR848_06410 PF00419 Fimbrial protein FR848_06415 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_06415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_06420 PF00577 Outer membrane usher protein FR848_06420 PF13953 PapC C-terminal domain FR848_06420 PF13954 PapC N-terminal domain FR848_06425 PF00419 Fimbrial protein FR848_06450 PF00248 Aldo/keto reductase family FR848_06455 PF03222 Tryptophan/tyrosine permease family FR848_06465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_06465 PF03466 LysR substrate binding domain FR848_06470 PF00108 Thiolase, N-terminal domain FR848_06470 PF02803 Thiolase, C-terminal domain FR848_06475 PF06178 Oligogalacturonate-specific porin protein (KdgM) FR848_06480 PF14583 Oligogalacturonate lyase FR848_06490 PF00083 Sugar (and other) transporter FR848_06495 PF00356 Bacterial regulatory proteins, lacI family FR848_06495 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR848_06500 PF01306 LacY proton/sugar symporter FR848_06505 PF08244 Glycosyl hydrolases family 32 C terminal FR848_06505 PF00251 Glycosyl hydrolases family 32 N-terminal domain FR848_06515 PF14583 Oligogalacturonate lyase FR848_06525 PF00005 ABC transporter FR848_06525 PF17912 MalK OB fold domain FR848_06525 PF03459 TOBE domain FR848_06530 PF00528 Binding-protein-dependent transport system inner membrane component FR848_06535 PF00528 Binding-protein-dependent transport system inner membrane component FR848_06545 PF01177 Asp/Glu/Hydantoin racemase FR848_06555 PF13953 PapC C-terminal domain FR848_06555 PF13954 PapC N-terminal domain FR848_06555 PF00577 Outer membrane usher protein FR848_06560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_06570 PF06551 Protein of unknown function (DUF1120) FR848_06575 PF03466 LysR substrate binding domain FR848_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_06580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FR848_06580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FR848_06585 PF00356 Bacterial regulatory proteins, lacI family FR848_06590 PF02378 Phosphotransferase system, EIIC FR848_06595 PF00232 Glycosyl hydrolase family 1 FR848_06600 PF07729 FCD domain FR848_06600 PF00392 Bacterial regulatory proteins, gntR family FR848_06610 PF00356 Bacterial regulatory proteins, lacI family FR848_06615 PF01553 Acyltransferase FR848_06615 PF00501 AMP-binding enzyme FR848_06620 PF07690 Major Facilitator Superfamily FR848_06625 PF00248 Aldo/keto reductase family FR848_06630 PF06004 Bacterial protein of unknown function (DUF903) FR848_06635 PF03741 Integral membrane protein TerC family FR848_06640 PF02976 DNA mismatch repair enzyme MutH FR848_06650 PF00293 NUDIX domain FR848_06655 PF00391 PEP-utilising enzyme, mobile domain FR848_06655 PF05524 PEP-utilising enzyme, N-terminal FR848_06655 PF01590 GAF domain FR848_06655 PF02896 PEP-utilising enzyme, TIM barrel domain FR848_06660 PF01790 Prolipoprotein diacylglyceryl transferase FR848_06665 PF00303 Thymidylate synthase FR848_06675 PF07963 Prokaryotic N-terminal methylation motif FR848_06680 PF07963 Prokaryotic N-terminal methylation motif FR848_06685 PF10713 Protein of unknown function (DUF2509) FR848_06690 PF12528 Type II secretion prepilin peptidase dependent protein C FR848_06690 PF07963 Prokaryotic N-terminal methylation motif FR848_06695 PF17946 RecC C-terminal domain FR848_06700 PF16187 Middle or third domain of peptidase_M16 FR848_06700 PF05193 Peptidase M16 inactive domain FR848_06700 PF00675 Insulinase (Peptidase family M16) FR848_06705 PF13361 UvrD-like helicase C-terminal domain FR848_06705 PF12705 PD-(D/E)XK nuclease superfamily FR848_06705 PF00580 UvrD/REP helicase N-terminal domain FR848_06710 PF13538 UvrD-like helicase C-terminal domain FR848_06715 PF00583 Acetyltransferase (GNAT) family FR848_06715 PF00696 Amino acid kinase family FR848_06720 PF11741 AMIN domain FR848_06720 PF01520 N-acetylmuramoyl-L-alanine amidase FR848_06725 PF00155 Aminotransferase class I and II FR848_06730 PF00288 GHMP kinases N terminal domain FR848_06735 PF00871 Acetokinase family FR848_06740 PF10662 Ethanolamine utilisation - propanediol utilisation FR848_06745 PF00936 BMC domain FR848_06755 PF10531 SLBB domain FR848_06755 PF13375 RnfC Barrel sandwich hybrid domain FR848_06755 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FR848_06755 PF13237 4Fe-4S dicluster domain FR848_06760 PF00171 Aldehyde dehydrogenase family FR848_06760 PF00465 Iron-containing alcohol dehydrogenase FR848_06765 PF00171 Aldehyde dehydrogenase family FR848_06770 PF01923 Cobalamin adenosyltransferase FR848_06775 PF03319 Ethanolamine utilisation protein EutN/carboxysome FR848_06785 PF06130 Phosphate propanoyltransferase FR848_06790 PF00936 BMC domain FR848_06795 PF00936 BMC domain FR848_06805 PF08841 Diol dehydratase reactivase ATPase-like domain FR848_06805 PF18427 DD-reactivating factor swiveling domain FR848_06810 PF02287 Dehydratase small subunit FR848_06815 PF02288 Dehydratase medium subunit FR848_06820 PF02286 Dehydratase large subunit FR848_06825 PF00936 BMC domain FR848_06830 PF00936 BMC domain FR848_06835 PF00230 Major intrinsic protein FR848_06840 PF10114 Sensory domain found in PocR FR848_06840 PF12833 Helix-turn-helix domain FR848_06845 PF07685 CobB/CobQ-like glutamine amidotransferase domain FR848_06845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FR848_06850 PF03186 CobD/Cbib protein FR848_06855 PF02570 Precorrin-8X methylmutase FR848_06860 PF01888 CbiD FR848_06865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR848_06870 PF05175 Methyltransferase small domain FR848_06875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR848_06880 PF11760 Cobalamin synthesis G N-terminal FR848_06880 PF11761 Cobalamin biosynthesis central region FR848_06880 PF01890 Cobalamin synthesis G C-terminus FR848_06885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR848_06890 PF02571 Precorrin-6x reductase CbiJ/CobK FR848_06895 PF06180 Cobalt chelatase (CbiK) FR848_06900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR848_06905 PF01891 Cobalt uptake substrate-specific transmembrane region FR848_06910 PF02553 Cobalt transport protein component CbiN FR848_06915 PF02361 Cobalt transport protein FR848_06920 PF00005 ABC transporter FR848_06925 PF07685 CobB/CobQ-like glutamine amidotransferase domain FR848_06930 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FR848_06935 PF02277 Phosphoribosyltransferase FR848_06955 PF06725 3D domain FR848_06955 PF03562 MltA specific insert domain FR848_06960 PF00899 ThiF family FR848_06965 PF02657 Fe-S metabolism associated domain FR848_06970 PF00266 Aminotransferase class-V FR848_06975 PF06004 Bacterial protein of unknown function (DUF903) FR848_06980 PF03466 LysR substrate binding domain FR848_06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_06985 PF04241 Protein of unknown function (DUF423) FR848_06990 PF01728 FtsJ-like methyltransferase FR848_06990 PF18125 RlmM ferredoxin-like domain FR848_06995 PF08220 DeoR-like helix-turn-helix domain FR848_06995 PF00455 DeoR C terminal sensor domain FR848_07000 PF05025 RbsD / FucU transport protein family FR848_07005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_07005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_07010 PF02952 L-fucose isomerase, C-terminal domain FR848_07010 PF07881 L-fucose isomerase, first N-terminal domain FR848_07010 PF07882 L-fucose isomerase, second N-terminal domain FR848_07015 PF07690 Major Facilitator Superfamily FR848_07020 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_07025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FR848_07025 PF01367 5'-3' exonuclease, C-terminal SAM fold FR848_07030 PF00158 Sigma-54 interaction domain FR848_07035 PF00296 Luciferase-like monooxygenase FR848_07045 PF00296 Luciferase-like monooxygenase FR848_07050 PF09084 NMT1/THI5 like FR848_07055 PF03313 Serine dehydratase alpha chain FR848_07055 PF03315 Serine dehydratase beta chain FR848_07065 PF03641 Possible lysine decarboxylase FR848_07065 PF11892 Domain of unknown function (DUF3412) FR848_07065 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FR848_07070 PF14489 QueF-like protein FR848_07070 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FR848_07075 PF07348 Syd protein (SUKH-2) FR848_07080 PF04287 tRNA pseudouridine synthase C FR848_07085 PF00849 RNA pseudouridylate synthase FR848_07090 PF00258 Flavodoxin FR848_07100 PF07690 Major Facilitator Superfamily FR848_07105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_07105 PF13378 Enolase C-terminal domain-like FR848_07110 PF13378 Enolase C-terminal domain-like FR848_07115 PF02595 Glycerate kinase family FR848_07120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FR848_07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_07120 PF00512 His Kinase A (phospho-acceptor) domain FR848_07120 PF01627 Hpt domain FR848_07120 PF00072 Response regulator receiver domain FR848_07120 PF00672 HAMP domain FR848_07125 PF01938 TRAM domain FR848_07125 PF05958 tRNA (Uracil-5-)-methyltransferase FR848_07130 PF13291 ACT domain FR848_07130 PF02824 TGS domain FR848_07130 PF04607 Region found in RelA / SpoT proteins FR848_07135 PF03819 MazG nucleotide pyrophosphohydrolase domain FR848_07140 PF06418 CTP synthase N-terminus FR848_07140 PF00117 Glutamine amidotransferase class-I FR848_07145 PF03952 Enolase, N-terminal domain FR848_07145 PF00113 Enolase, C-terminal TIM barrel domain FR848_07155 PF04055 Radical SAM superfamily FR848_07160 PF01242 6-pyruvoyl tetrahydropterin synthase FR848_07165 PF00667 FAD binding domain FR848_07165 PF00175 Oxidoreductase NAD-binding domain FR848_07165 PF00258 Flavodoxin FR848_07170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FR848_07170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FR848_07180 PF01507 Phosphoadenosine phosphosulfate reductase family FR848_07195 PF00266 Aminotransferase class-V FR848_07200 PF00892 EamA-like transporter family FR848_07215 PF04389 Peptidase family M28 FR848_07220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR848_07220 PF10414 Sirohaem synthase dimerisation region FR848_07220 PF14824 Sirohaem biosynthesis protein central FR848_07225 PF01507 Phosphoadenosine phosphosulfate reductase family FR848_07230 PF00009 Elongation factor Tu GTP binding domain FR848_07240 PF12084 Protein of unknown function (DUF3561) FR848_07245 PF04977 Septum formation initiator FR848_07250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FR848_07255 PF02542 YgbB family FR848_07260 PF01142 tRNA pseudouridine synthase D (TruD) FR848_07265 PF01975 Survival protein SurE FR848_07275 PF01551 Peptidase family M23 FR848_07275 PF01476 LysM domain FR848_07280 PF00140 Sigma-70 factor, region 1.2 FR848_07280 PF04542 Sigma-70 region 2 FR848_07280 PF04539 Sigma-70 region 3 FR848_07280 PF04545 Sigma-70, region 4 FR848_07290 PF07690 Major Facilitator Superfamily FR848_07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_07295 PF03466 LysR substrate binding domain FR848_07300 PF01047 MarR family FR848_07305 PF02441 Flavoprotein FR848_07310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FR848_07325 PF01848 Hok/gef family FR848_07330 PF05190 MutS family domain IV FR848_07330 PF01624 MutS domain I FR848_07330 PF00488 MutS domain V FR848_07330 PF05192 MutS domain III FR848_07330 PF05188 MutS domain II FR848_07335 PF00419 Fimbrial protein FR848_07345 PF13954 PapC N-terminal domain FR848_07345 PF13953 PapC C-terminal domain FR848_07345 PF00577 Outer membrane usher protein FR848_07350 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_07350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_07360 PF00419 Fimbrial protein FR848_07390 PF00005 ABC transporter FR848_07390 PF00664 ABC transporter transmembrane region FR848_07395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_07400 PF12704 MacB-like periplasmic core domain FR848_07400 PF00005 ABC transporter FR848_07400 PF02687 FtsX-like permease family FR848_07405 PF02321 Outer membrane efflux protein FR848_07410 PF02801 Beta-ketoacyl synthase, C-terminal domain FR848_07410 PF00109 Beta-ketoacyl synthase, N-terminal domain FR848_07455 PF00465 Iron-containing alcohol dehydrogenase FR848_07460 PF00392 Bacterial regulatory proteins, gntR family FR848_07460 PF07729 FCD domain FR848_07465 PF00107 Zinc-binding dehydrogenase FR848_07465 PF08240 Alcohol dehydrogenase GroES-like domain FR848_07470 PF07690 Major Facilitator Superfamily FR848_07475 PF00106 short chain dehydrogenase FR848_07480 PF13378 Enolase C-terminal domain-like FR848_07480 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_07485 PF00005 ABC transporter FR848_07490 PF01032 FecCD transport family FR848_07495 PF01497 Periplasmic binding protein FR848_07500 PF05171 Haemin-degrading HemS.ChuX domain FR848_07505 PF07715 TonB-dependent Receptor Plug Domain FR848_07505 PF00593 TonB dependent receptor FR848_07515 PF11756 Nitrous oxide-stimulated promoter FR848_07520 PF00950 ABC 3 transport family FR848_07525 PF00950 ABC 3 transport family FR848_07530 PF00005 ABC transporter FR848_07535 PF01297 Zinc-uptake complex component A periplasmic FR848_07540 PF00356 Bacterial regulatory proteins, lacI family FR848_07545 PF00480 ROK family FR848_07550 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FR848_07555 PF02378 Phosphotransferase system, EIIC FR848_07560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_07565 PF02378 Phosphotransferase system, EIIC FR848_07570 PF02264 LamB porin FR848_07580 PF00232 Glycosyl hydrolase family 1 FR848_07585 PF13472 GDSL-like Lipase/Acylhydrolase family FR848_07585 PF07859 alpha/beta hydrolase fold FR848_07590 PF00158 Sigma-54 interaction domain FR848_07590 PF01590 GAF domain FR848_07590 PF02954 Bacterial regulatory protein, Fis family FR848_07595 PF02769 AIR synthase related protein, C-terminal domain FR848_07595 PF00586 AIR synthase related protein, N-terminal domain FR848_07600 PF01924 Hydrogenase formation hypA family FR848_07605 PF01455 HupF/HypC family FR848_07610 PF02492 CobW/HypB/UreG, nucleotide-binding domain FR848_07615 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FR848_07620 PF11046 Transcriptional repressor of hyc and hyp operons FR848_07625 PF13247 4Fe-4S dicluster domain FR848_07630 PF00361 Proton-conducting membrane transporter FR848_07635 PF00146 NADH dehydrogenase FR848_07640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FR848_07640 PF00374 Nickel-dependent hydrogenase FR848_07640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FR848_07645 PF12838 4Fe-4S dicluster domain FR848_07650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FR848_07655 PF07450 Formate hydrogenlyase maturation protein HycH FR848_07660 PF01750 Hydrogenase maturation protease FR848_07670 PF00232 Glycosyl hydrolase family 1 FR848_07675 PF02378 Phosphotransferase system, EIIC FR848_07675 PF00367 phosphotransferase system, EIIB FR848_07685 PF00356 Bacterial regulatory proteins, lacI family FR848_07690 PF13247 4Fe-4S dicluster domain FR848_07690 PF12800 4Fe-4S binding domain FR848_07695 PF17788 HypF Kae1-like domain FR848_07695 PF07503 HypF finger FR848_07695 PF00708 Acylphosphatase FR848_07695 PF01300 Telomere recombination FR848_07700 PF03824 High-affinity nickel-transport protein FR848_07705 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_07705 PF18113 Rubredoxin binding C-terminal domain FR848_07710 PF00258 Flavodoxin FR848_07710 PF00753 Metallo-beta-lactamase superfamily FR848_07710 PF00301 Rubredoxin FR848_07720 PF00158 Sigma-54 interaction domain FR848_07720 PF01590 GAF domain FR848_07725 PF00571 CBS domain FR848_07725 PF01380 SIS domain FR848_07730 PF00455 DeoR C terminal sensor domain FR848_07730 PF08220 DeoR-like helix-turn-helix domain FR848_07735 PF06923 Glucitol operon activator protein (GutM) FR848_07740 PF00106 short chain dehydrogenase FR848_07745 PF03829 PTS system glucitol/sorbitol-specific IIA component FR848_07750 PF07663 Sorbitol phosphotransferase enzyme II C-terminus FR848_07750 PF03612 Sorbitol phosphotransferase enzyme II N-terminus FR848_07755 PF03608 PTS system enzyme II sorbitol-specific factor FR848_07760 PF13406 Transglycosylase SLT domain FR848_07765 PF00005 ABC transporter FR848_07770 PF00950 ABC 3 transport family FR848_07775 PF01297 Zinc-uptake complex component A periplasmic FR848_07785 PF02464 Competence-damaged protein FR848_07790 PF00154 recA bacterial DNA recombination protein FR848_07795 PF02631 RecX family FR848_07800 PF01411 tRNA synthetases class II (A) FR848_07800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FR848_07800 PF02272 DHHA1 domain FR848_07805 PF02599 Global regulator protein family FR848_07835 PF04972 BON domain FR848_07840 PF13419 Haloacid dehalogenase-like hydrolase FR848_07845 PF09335 SNARE associated Golgi protein FR848_07850 PF04262 Glutamate-cysteine ligase FR848_07855 PF02664 S-Ribosylhomocysteinase (LuxS) FR848_07860 PF12833 Helix-turn-helix domain FR848_07860 PF12852 Cupin FR848_07865 PF08502 LeuA allosteric (dimerisation) domain FR848_07865 PF00682 HMGL-like FR848_07870 PF07690 Major Facilitator Superfamily FR848_07875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_07875 PF00529 HlyD membrane-fusion protein of T1SS FR848_07880 PF01047 MarR family FR848_07885 PF05437 Branched-chain amino acid transport protein (AzlD) FR848_07890 PF03591 AzlC protein FR848_07895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FR848_07900 PF00528 Binding-protein-dependent transport system inner membrane component FR848_07905 PF00571 CBS domain FR848_07905 PF00005 ABC transporter FR848_07910 PF00268 Ribonucleotide reductase, small chain FR848_07915 PF08343 Ribonucleotide reductase N-terminal FR848_07915 PF00317 Ribonucleotide reductase, all-alpha domain FR848_07915 PF02867 Ribonucleotide reductase, barrel domain FR848_07920 PF07972 NrdI Flavodoxin like FR848_07925 PF00462 Glutaredoxin FR848_07930 PF02627 Carboxymuconolactone decarboxylase family FR848_07935 PF00155 Aminotransferase class I and II FR848_07935 PF00392 Bacterial regulatory proteins, gntR family FR848_07940 PF05957 Bacterial protein of unknown function (DUF883) FR848_07945 PF09400 Protein of unknown function (DUF2002) FR848_07950 PF06610 L-alanine exporter FR848_07960 PF00816 H-NS histone family FR848_07970 PF00581 Rhodanese-like domain FR848_07970 PF11127 Protein of unknown function (DUF2892) FR848_07975 PF01022 Bacterial regulatory protein, arsR family FR848_07980 PF01569 PAP2 superfamily FR848_07985 PF02954 Bacterial regulatory protein, Fis family FR848_07985 PF01590 GAF domain FR848_07985 PF00158 Sigma-54 interaction domain FR848_07990 PF00171 Aldehyde dehydrogenase family FR848_08000 PF00419 Fimbrial protein FR848_08005 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_08005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_08010 PF13953 PapC C-terminal domain FR848_08010 PF13954 PapC N-terminal domain FR848_08010 PF00577 Outer membrane usher protein FR848_08020 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_08025 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_08030 PF03466 LysR substrate binding domain FR848_08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_08040 PF07690 Major Facilitator Superfamily FR848_08045 PF03150 Di-haem cytochrome c peroxidase FR848_08045 PF14376 Haem-binding domain FR848_08045 PF00034 Cytochrome c FR848_08050 PF00005 ABC transporter FR848_08055 PF03379 CcmB protein FR848_08060 PF01578 Cytochrome C assembly protein FR848_08065 PF04995 Heme exporter protein D (CcmD) FR848_08070 PF03100 CcmE FR848_08075 PF01578 Cytochrome C assembly protein FR848_08075 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FR848_08080 PF08534 Redoxin FR848_08085 PF03918 Cytochrome C biogenesis protein FR848_08090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_08095 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_08100 PF00005 ABC transporter FR848_08105 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_08120 PF00491 Arginase family FR848_08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_08125 PF03466 LysR substrate binding domain FR848_08145 PF00196 Bacterial regulatory proteins, luxR family FR848_08145 PF00072 Response regulator receiver domain FR848_08150 PF00072 Response regulator receiver domain FR848_08150 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_08150 PF00512 His Kinase A (phospho-acceptor) domain FR848_08150 PF01627 Hpt domain FR848_08160 PF00419 Fimbrial protein FR848_08165 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_08165 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_08170 PF13953 PapC C-terminal domain FR848_08170 PF00577 Outer membrane usher protein FR848_08170 PF13954 PapC N-terminal domain FR848_08205 PF00589 Phage integrase family FR848_08205 PF12167 Arm DNA-binding domain FR848_08260 PF00717 Peptidase S24-like FR848_08260 PF01381 Helix-turn-helix FR848_08295 PF03589 Antitermination protein FR848_08355 PF03354 Phage Terminase FR848_08360 PF04860 Phage portal protein FR848_08365 PF00574 Clp protease FR848_08485 PF06183 DinI-like family FR848_08495 PF01668 SmpB protein FR848_08500 PF03364 Polyketide cyclase / dehydrase and lipid transport FR848_08505 PF03658 RnfH family Ubiquitin FR848_08510 PF04355 SmpA / OmlA family FR848_08515 PF02463 RecF/RecN/SMC N terminal domain FR848_08520 PF01513 ATP-NAD kinase FR848_08525 PF01025 GrpE FR848_08530 PF00571 CBS domain FR848_08530 PF03471 Transporter associated domain FR848_08530 PF01595 Cyclin M transmembrane N-terminal domain FR848_08535 PF01578 Cytochrome C assembly protein FR848_08540 PF02978 Signal peptide binding domain FR848_08540 PF02881 SRP54-type protein, helical bundle domain FR848_08540 PF00448 SRP54-type protein, GTPase domain FR848_08545 PF00886 Ribosomal protein S16 FR848_08550 PF05239 PRC-barrel domain FR848_08550 PF01782 RimM N-terminal domain FR848_08555 PF01746 tRNA (Guanine-1)-methyltransferase FR848_08560 PF01245 Ribosomal protein L19 FR848_08575 PF00691 OmpA family FR848_08580 PF00990 Diguanylate cyclase, GGDEF domain FR848_08580 PF17152 Periplasmic sensor domain FR848_08585 PF13689 YfiR/HmsC-like FR848_08590 PF00793 DAHP synthetase I family FR848_08595 PF01817 Chorismate mutase type II FR848_08595 PF02153 Prephenate dehydrogenase FR848_08600 PF08450 SMP-30/Gluconolactonase/LRE-like region FR848_08605 PF01817 Chorismate mutase type II FR848_08605 PF00800 Prephenate dehydratase FR848_08615 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FR848_08620 PF13525 Outer membrane lipoprotein FR848_08625 PF01479 S4 domain FR848_08625 PF00849 RNA pseudouridylate synthase FR848_08635 PF07724 AAA domain (Cdc48 subfamily) FR848_08635 PF17871 AAA lid domain FR848_08635 PF00004 ATPase family associated with various cellular activities (AAA) FR848_08635 PF10431 C-terminal, D2-small domain, of ClpB protein FR848_08635 PF02861 Clp amino terminal domain, pathogenicity island component FR848_08665 PF00083 Sugar (and other) transporter FR848_08670 PF10043 Predicted periplasmic lipoprotein (DUF2279) FR848_08675 PF13091 PLD-like domain FR848_08680 PF13607 Succinyl-CoA ligase like flavodoxin domain FR848_08680 PF13380 CoA binding domain FR848_08680 PF00583 Acetyltransferase (GNAT) family FR848_08690 PF00085 Thioredoxin FR848_08695 PF00588 SpoU rRNA Methylase family FR848_08695 PF08032 RNA 2'-O ribose methyltransferase substrate binding FR848_08700 PF01609 Transposase DDE domain FR848_08700 PF13006 Insertion element 4 transposase N-terminal FR848_08705 PF03167 Uracil DNA glycosylase superfamily FR848_08710 PF01228 Glycine radical FR848_08715 PF00270 DEAD/DEAH box helicase FR848_08715 PF00271 Helicase conserved C-terminal domain FR848_08720 PF05175 Methyltransferase small domain FR848_08725 PF02910 Fumarate reductase flavoprotein C-term FR848_08725 PF00890 FAD binding domain FR848_08735 PF04542 Sigma-70 region 2 FR848_08735 PF08281 Sigma-70, region 4 FR848_08740 PF03873 Anti sigma-E protein RseA, C-terminal domain FR848_08740 PF03872 Anti sigma-E protein RseA, N-terminal domain FR848_08745 PF03888 MucB/RseB N-terminal domain FR848_08745 PF17188 MucB/RseB C-terminal domain FR848_08755 PF00009 Elongation factor Tu GTP binding domain FR848_08755 PF03144 Elongation factor Tu domain 2 FR848_08755 PF06421 GTP-binding protein LepA C-terminus FR848_08755 PF00679 Elongation factor G C-terminus FR848_08760 PF10502 Signal peptidase, peptidase S26 FR848_08765 PF14622 Ribonuclease-III-like FR848_08765 PF00035 Double-stranded RNA binding motif FR848_08770 PF07650 KH domain FR848_08770 PF01926 50S ribosome-binding GTPase FR848_08775 PF02565 Recombination protein O C terminal FR848_08775 PF11967 Recombination protein O N terminal FR848_08780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FR848_08785 PF01648 4'-phosphopantetheinyl transferase superfamily FR848_08790 PF12838 4Fe-4S dicluster domain FR848_08795 PF01418 Helix-turn-helix domain, rpiR family FR848_08795 PF01380 SIS domain FR848_08805 PF14437 MafB19-like deaminase FR848_08810 PF01464 Transglycosylase SLT domain FR848_08810 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_08820 PF02769 AIR synthase related protein, C-terminal domain FR848_08820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FR848_08820 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FR848_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_08825 PF00512 His Kinase A (phospho-acceptor) domain FR848_08830 PF13942 YfhG lipoprotein FR848_08835 PF00072 Response regulator receiver domain FR848_08835 PF00158 Sigma-54 interaction domain FR848_08840 PF00543 Nitrogen regulatory protein P-II FR848_08845 PF00042 Globin FR848_08845 PF00970 Oxidoreductase FAD-binding domain FR848_08845 PF00175 Oxidoreductase NAD-binding domain FR848_08850 PF00464 Serine hydroxymethyltransferase FR848_08855 PF07681 DoxX FR848_08860 PF00480 ROK family FR848_08865 PF13181 Tetratricopeptide repeat FR848_08865 PF17128 Domain of unknown function (DUF5107) FR848_08870 PF00083 Sugar (and other) transporter FR848_08875 PF01263 Aldose 1-epimerase FR848_08880 PF12832 MFS_1 like family FR848_08885 PF00874 PRD domain FR848_08890 PF06226 Protein of unknown function (DUF1007) FR848_08895 PF03824 High-affinity nickel-transport protein FR848_08900 PF00459 Inositol monophosphatase family FR848_08905 PF00588 SpoU rRNA Methylase family FR848_08910 PF02082 Transcriptional regulator FR848_08915 PF00266 Aminotransferase class-V FR848_08920 PF01592 NifU-like N terminal domain FR848_08925 PF01521 Iron-sulphur cluster biosynthesis FR848_08930 PF00226 DnaJ domain FR848_08930 PF07743 HSCB C-terminal oligomerisation domain FR848_08935 PF00012 Hsp70 protein FR848_08940 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_08945 PF04384 Iron-sulphur cluster assembly FR848_08950 PF00883 Cytosol aminopeptidase family, catalytic domain FR848_08950 PF12404 Peptidase FR848_08955 PF07179 SseB protein N-terminal domain FR848_08955 PF14581 SseB protein C-terminal domain FR848_08960 PF00581 Rhodanese-like domain FR848_08965 PF01546 Peptidase family M20/M25/M40 FR848_08965 PF07687 Peptidase dimerisation domain FR848_08975 PF00207 Alpha-2-macroglobulin family FR848_08975 PF07678 A-macroglobulin TED domain FR848_08975 PF01835 MG2 domain FR848_08975 PF17962 Bacterial macroglobulin domain 6 FR848_08975 PF07703 Alpha-2-macroglobulin bait region domain FR848_08975 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FR848_08975 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FR848_08975 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FR848_08975 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FR848_08980 PF00905 Penicillin binding protein transpeptidase domain FR848_08980 PF00912 Transglycosylase FR848_08980 PF06832 Penicillin-Binding Protein C-terminus Family FR848_08985 PF00334 Nucleoside diphosphate kinase FR848_08990 PF04055 Radical SAM superfamily FR848_08995 PF13464 Domain of unknown function (DUF4115) FR848_09000 PF04551 GcpE protein FR848_09005 PF03129 Anticodon binding domain FR848_09005 PF13393 Histidyl-tRNA synthetase FR848_09010 PF09976 Tetratricopeptide repeat-like domain FR848_09015 PF13360 PQQ-like domain FR848_09020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FR848_09020 PF01926 50S ribosome-binding GTPase FR848_09025 PF03544 Gram-negative bacterial TonB protein C-terminal FR848_09035 PF07191 zinc-ribbons FR848_09045 PF01447 Thermolysin metallopeptidase, catalytic domain FR848_09045 PF16485 Protealysin propeptide FR848_09045 PF02868 Thermolysin metallopeptidase, alpha-helical domain FR848_09050 PF13742 OB-fold nucleic acid binding domain FR848_09050 PF02601 Exonuclease VII, large subunit FR848_09055 PF00571 CBS domain FR848_09055 PF00478 IMP dehydrogenase / GMP reductase domain FR848_09060 PF02540 NAD synthase FR848_09060 PF00958 GMP synthase C terminal domain FR848_09060 PF00117 Glutamine amidotransferase class-I FR848_09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_09070 PF03466 LysR substrate binding domain FR848_09075 PF11119 Protein of unknown function (DUF2633) FR848_09080 PF00563 EAL domain FR848_09080 PF05231 MASE1 FR848_09085 PF02541 Ppx/GppA phosphatase family FR848_09090 PF13089 Polyphosphate kinase N-terminal domain FR848_09090 PF17941 Polyphosphate kinase C-terminal domain 1 FR848_09090 PF02503 Polyphosphate kinase middle domain FR848_09090 PF13090 Polyphosphate kinase C-terminal domain 2 FR848_09115 PF00551 Formyl transferase FR848_09120 PF02769 AIR synthase related protein, C-terminal domain FR848_09120 PF00586 AIR synthase related protein, N-terminal domain FR848_09125 PF00480 ROK family FR848_09130 PF00232 Glycosyl hydrolase family 1 FR848_09140 PF00860 Permease family FR848_09145 PF00308 Bacterial dnaA protein FR848_09150 PF03960 ArsC family FR848_09155 PF01435 Peptidase family M48 FR848_09160 PF01594 AI-2E family transporter FR848_09165 PF00578 AhpC/TSA family FR848_09170 PF01842 ACT domain FR848_09175 PF00701 Dihydrodipicolinate synthetase family FR848_09180 PF06804 NlpB/DapX lipoprotein FR848_09185 PF01259 SAICAR synthetase FR848_09190 PF04228 Putative neutral zinc metallopeptidase FR848_09195 PF08351 Domain of unknown function (DUF1726) FR848_09195 PF17176 tRNA-binding domain FR848_09195 PF05127 Helicase FR848_09195 PF13718 GNAT acetyltransferase 2 FR848_09200 PF02230 Phospholipase/Carboxylesterase FR848_09215 PF13980 Uncharacterised protein family (UPF0370) FR848_09220 PF01546 Peptidase family M20/M25/M40 FR848_09220 PF07687 Peptidase dimerisation domain FR848_09225 PF03960 ArsC family FR848_09235 PF00873 AcrB/AcrD/AcrF family FR848_09240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FR848_09240 PF13247 4Fe-4S dicluster domain FR848_09240 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_09245 PF00293 NUDIX domain FR848_09250 PF06674 Protein of unknown function (DUF1176) FR848_09255 PF02779 Transketolase, pyrimidine binding domain FR848_09255 PF00456 Transketolase, thiamine diphosphate binding domain FR848_09255 PF02780 Transketolase, C-terminal domain FR848_09260 PF00390 Malic enzyme, N-terminal domain FR848_09260 PF01515 Phosphate acetyl/butaryl transferase FR848_09260 PF03949 Malic enzyme, NAD binding domain FR848_09265 PF00936 BMC domain FR848_09270 PF10662 Ethanolamine utilisation - propanediol utilisation FR848_09275 PF06249 Ethanolamine utilisation protein EutQ FR848_09280 PF01923 Cobalamin adenosyltransferase FR848_09285 PF01515 Phosphate acetyl/butaryl transferase FR848_09290 PF00936 BMC domain FR848_09295 PF03319 Ethanolamine utilisation protein EutN/carboxysome FR848_09300 PF00171 Aldehyde dehydrogenase family FR848_09310 PF00465 Iron-containing alcohol dehydrogenase FR848_09325 PF06277 Ethanolamine utilisation protein EutA FR848_09330 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FR848_09335 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FR848_09340 PF00936 BMC domain FR848_09345 PF16365 Ethanolamine utilization protein EutK C-terminus FR848_09345 PF00936 BMC domain FR848_09350 PF12833 Helix-turn-helix domain FR848_09355 PF01218 Coproporphyrinogen III oxidase FR848_09360 PF01520 N-acetylmuramoyl-L-alanine amidase FR848_09365 PF00583 Acetyltransferase (GNAT) family FR848_09370 PF11143 Protein of unknown function (DUF2919) FR848_09375 PF06572 Protein of unknown function (DUF1131) FR848_09380 PF04261 Dyp-type peroxidase family FR848_09390 PF00528 Binding-protein-dependent transport system inner membrane component FR848_09395 PF00528 Binding-protein-dependent transport system inner membrane component FR848_09400 PF00005 ABC transporter FR848_09405 PF00291 Pyridoxal-phosphate dependent enzyme FR848_09410 PF13474 SnoaL-like domain FR848_09415 PF00117 Glutamine amidotransferase class-I FR848_09420 PF00392 Bacterial regulatory proteins, gntR family FR848_09420 PF00155 Aminotransferase class I and II FR848_09425 PF08543 Phosphomethylpyrimidine kinase FR848_09435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FR848_09440 PF05524 PEP-utilising enzyme, N-terminal FR848_09440 PF00391 PEP-utilising enzyme, mobile domain FR848_09440 PF02896 PEP-utilising enzyme, TIM barrel domain FR848_09445 PF00381 PTS HPr component phosphorylation site FR848_09455 PF00291 Pyridoxal-phosphate dependent enzyme FR848_09465 PF04354 ZipA, C-terminal FtsZ-binding domain FR848_09470 PF01653 NAD-dependent DNA ligase adenylation domain FR848_09470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FR848_09470 PF03120 NAD-dependent DNA ligase OB-fold domain FR848_09470 PF00533 BRCA1 C Terminus (BRCT) domain FR848_09470 PF12826 Helix-hairpin-helix motif FR848_09475 PF12843 Putative quorum-sensing-regulated virulence factor FR848_09480 PF13593 SBF-like CPA transporter family (DUF4137) FR848_09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_09485 PF03466 LysR substrate binding domain FR848_09490 PF01048 Phosphorylase superfamily FR848_09495 PF03825 Nucleoside H+ symporter FR848_09500 PF03466 LysR substrate binding domain FR848_09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_09525 PF00749 tRNA synthetases class I (E and Q), catalytic domain FR848_09530 PF07037 Putative transcription regulator (DUF1323) FR848_09535 PF07037 Putative transcription regulator (DUF1323) FR848_09550 PF00563 EAL domain FR848_09550 PF05231 MASE1 FR848_09555 PF07662 Na+ dependent nucleoside transporter C-terminus FR848_09555 PF07670 Nucleoside recognition FR848_09555 PF01773 Na+ dependent nucleoside transporter N-terminus FR848_09560 PF01566 Natural resistance-associated macrophage protein FR848_09565 PF10697 Protein of unknown function (DUF2502) FR848_09570 PF00248 Aldo/keto reductase family FR848_09575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_09575 PF00205 Thiamine pyrophosphate enzyme, central domain FR848_09575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_09580 PF00654 Voltage gated chloride channel FR848_09585 PF02685 Glucokinase FR848_09590 PF04397 LytTr DNA-binding domain FR848_09590 PF00072 Response regulator receiver domain FR848_09595 PF07694 5TMR of 5TMR-LYT FR848_09595 PF06580 Histidine kinase FR848_09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_09600 PF00155 Aminotransferase class I and II FR848_09610 PF07690 Major Facilitator Superfamily FR848_09615 PF03466 LysR substrate binding domain FR848_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_09640 PF01226 Formate/nitrite transporter FR848_09645 PF04333 MlaA lipoprotein FR848_09650 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FR848_09655 PF04175 Protein of unknown function (DUF406) FR848_09660 PF02803 Thiolase, C-terminal domain FR848_09660 PF00108 Thiolase, N-terminal domain FR848_09665 PF00378 Enoyl-CoA hydratase/isomerase FR848_09665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FR848_09665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FR848_09670 PF00300 Histidine phosphatase superfamily (branch 1) FR848_09675 PF01713 Smr domain FR848_09680 PF05175 Methyltransferase small domain FR848_09685 PF01264 Chorismate synthase FR848_09690 PF03411 Penicillin-insensitive murein endopeptidase FR848_09695 PF01925 Sulfite exporter TauE/SafE FR848_09700 PF04315 Elongation factor P hydroxylase FR848_09705 PF08891 YfcL protein FR848_09710 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FR848_09710 PF01266 FAD dependent oxidoreductase FR848_09715 PF00109 Beta-ketoacyl synthase, N-terminal domain FR848_09715 PF02801 Beta-ketoacyl synthase, C-terminal domain FR848_09720 PF07690 Major Facilitator Superfamily FR848_09730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_09730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_09730 PF11890 Domain of unknown function (DUF3410) FR848_09735 PF02774 Semialdehyde dehydrogenase, dimerisation domain FR848_09735 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR848_09740 PF01416 tRNA pseudouridine synthase FR848_09745 PF09335 SNARE associated Golgi protein FR848_09750 PF01039 Carboxyl transferase domain FR848_09750 PF17848 Acetyl-coA carboxylase zinc finger domain FR848_09755 PF02875 Mur ligase family, glutamate ligase domain FR848_09755 PF08245 Mur ligase middle domain FR848_09760 PF05036 Sporulation related domain FR848_09765 PF02674 Colicin V production protein FR848_09770 PF00156 Phosphoribosyl transferase domain FR848_09775 PF02441 Flavoprotein FR848_09780 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_09785 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_09790 PF00528 Binding-protein-dependent transport system inner membrane component FR848_09795 PF00528 Binding-protein-dependent transport system inner membrane component FR848_09800 PF00005 ABC transporter FR848_09805 PF13302 Acetyltransferase (GNAT) domain FR848_09820 PF08338 Domain of unknown function (DUF1731) FR848_09820 PF01370 NAD dependent epimerase/dehydratase family FR848_09825 PF02152 Dihydroneopterin aldolase FR848_09830 PF02798 Glutathione S-transferase, N-terminal domain FR848_09830 PF00043 Glutathione S-transferase, C-terminal domain FR848_09835 PF14834 Glutathione S-transferase, C-terminal domain FR848_09835 PF02798 Glutathione S-transferase, N-terminal domain FR848_09840 PF12850 Calcineurin-like phosphoesterase superfamily domain FR848_09845 PF00293 NUDIX domain FR848_09850 PF00356 Bacterial regulatory proteins, lacI family FR848_09855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_09865 PF03611 PTS system sugar-specific permease component FR848_09870 PF00456 Transketolase, thiamine diphosphate binding domain FR848_09875 PF02780 Transketolase, C-terminal domain FR848_09875 PF02779 Transketolase, pyrimidine binding domain FR848_09875 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FR848_09880 PF01515 Phosphate acetyl/butaryl transferase FR848_09880 PF07085 DRTGG domain FR848_09885 PF00871 Acetokinase family FR848_09890 PF04217 Protein of unknown function, DUF412 FR848_09895 PF03887 YfbU domain FR848_09900 PF13419 Haloacid dehalogenase-like hydrolase FR848_09905 PF03600 Citrate transporter FR848_09905 PF02080 TrkA-C domain FR848_09915 PF00155 Aminotransferase class I and II FR848_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_09920 PF03466 LysR substrate binding domain FR848_09930 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FR848_09935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FR848_09940 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FR848_09940 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FR848_09950 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FR848_09950 PF10531 SLBB domain FR848_09950 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FR848_09955 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FR848_09955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR848_09955 PF00384 Molybdopterin oxidoreductase FR848_09955 PF01568 Molydopterin dinucleotide binding domain FR848_09960 PF00146 NADH dehydrogenase FR848_09965 PF12838 4Fe-4S dicluster domain FR848_09970 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FR848_09975 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FR848_09980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FR848_09980 PF00361 Proton-conducting membrane transporter FR848_09985 PF00361 Proton-conducting membrane transporter FR848_09990 PF00361 Proton-conducting membrane transporter FR848_09995 PF00589 Phage integrase family FR848_10005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_10005 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_10010 PF13954 PapC N-terminal domain FR848_10010 PF00577 Outer membrane usher protein FR848_10010 PF13953 PapC C-terminal domain FR848_10015 PF00419 Fimbrial protein FR848_10025 PF00589 Phage integrase family FR848_10030 PF12706 Beta-lactamase superfamily domain FR848_10035 PF13673 Acetyltransferase (GNAT) domain FR848_10040 PF00425 chorismate binding enzyme FR848_10045 PF16582 Middle domain of thiamine pyrophosphate FR848_10045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_10045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_10050 PF12697 Alpha/beta hydrolase family FR848_10055 PF00378 Enoyl-CoA hydratase/isomerase FR848_10060 PF13378 Enolase C-terminal domain-like FR848_10065 PF13193 AMP-binding enzyme C-terminal domain FR848_10065 PF00501 AMP-binding enzyme FR848_10070 PF09997 Predicted membrane protein (DUF2238) FR848_10075 PF01970 Tripartite tricarboxylate transporter TctA family FR848_10090 PF00072 Response regulator receiver domain FR848_10090 PF00486 Transcriptional regulatory protein, C terminal FR848_10095 PF00512 His Kinase A (phospho-acceptor) domain FR848_10095 PF08521 Two-component sensor kinase N-terminal FR848_10095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_10100 PF00293 NUDIX domain FR848_10105 PF04754 Putative transposase, YhgA-like FR848_10110 PF06628 Catalase-related immune-responsive FR848_10110 PF00199 Catalase FR848_10115 PF07437 YfaZ precursor FR848_10120 PF00994 Probable molybdopterin binding domain FR848_10125 PF01614 Bacterial transcriptional regulator FR848_10125 PF09339 IclR helix-turn-helix domain FR848_10130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_10130 PF13378 Enolase C-terminal domain-like FR848_10135 PF07690 Major Facilitator Superfamily FR848_10140 PF03328 HpcH/HpaI aldolase/citrate lyase family FR848_10145 PF02754 Cysteine-rich domain FR848_10145 PF13183 4Fe-4S dicluster domain FR848_10150 PF00890 FAD binding domain FR848_10155 PF04324 BFD-like [2Fe-2S] binding domain FR848_10155 PF01266 FAD dependent oxidoreductase FR848_10160 PF07690 Major Facilitator Superfamily FR848_10165 PF03009 Glycerophosphoryl diester phosphodiesterase family FR848_10170 PF03466 LysR substrate binding domain FR848_10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_10175 PF05199 GMC oxidoreductase FR848_10175 PF00732 GMC oxidoreductase FR848_10180 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_10185 PF00268 Ribonucleotide reductase, small chain FR848_10190 PF00317 Ribonucleotide reductase, all-alpha domain FR848_10190 PF03477 ATP cone domain FR848_10190 PF02867 Ribonucleotide reductase, barrel domain FR848_10200 PF03989 DNA gyrase C-terminal domain, beta-propeller FR848_10200 PF00521 DNA gyrase/topoisomerase IV, subunit A FR848_10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_10205 PF00512 His Kinase A (phospho-acceptor) domain FR848_10205 PF09456 RcsC Alpha-Beta-Loop (ABL) FR848_10205 PF00072 Response regulator receiver domain FR848_10210 PF00072 Response regulator receiver domain FR848_10210 PF00196 Bacterial regulatory proteins, luxR family FR848_10215 PF01627 Hpt domain FR848_10215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_10215 PF16359 RcsD-ABL domain FR848_10225 PF00267 Gram-negative porin FR848_10230 PF02424 ApbE family FR848_10235 PF02805 Metal binding domain of Ada FR848_10235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FR848_10235 PF12833 Helix-turn-helix domain FR848_10235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FR848_10240 PF13532 2OG-Fe(II) oxygenase superfamily FR848_10245 PF00005 ABC transporter FR848_10250 PF01769 Divalent cation transporter FR848_10250 PF03448 MgtE intracellular N domain FR848_10250 PF00571 CBS domain FR848_10255 PF00916 Sulfate permease family FR848_10255 PF01740 STAS domain FR848_10260 PF06039 Malate:quinone oxidoreductase (Mqo) FR848_10265 PF03974 Ecotin FR848_10270 PF01594 AI-2E family transporter FR848_10330 PF01476 LysM domain FR848_10330 PF00704 Glycosyl hydrolases family 18 FR848_10400 PF11893 Domain of unknown function (DUF3413) FR848_10400 PF00884 Sulfatase FR848_10405 PF07208 Protein of unknown function (DUF1414) FR848_10410 PF04245 37-kD nucleoid-associated bacterial protein FR848_10415 PF08220 DeoR-like helix-turn-helix domain FR848_10415 PF00455 DeoR C terminal sensor domain FR848_10420 PF00293 NUDIX domain FR848_10425 PF01386 Ribosomal L25p family FR848_10430 PF00271 Helicase conserved C-terminal domain FR848_10430 PF04851 Type III restriction enzyme, res subunit FR848_10435 PF01479 S4 domain FR848_10435 PF00849 RNA pseudouridylate synthase FR848_10440 PF07690 Major Facilitator Superfamily FR848_10445 PF13989 YejG-like protein FR848_10450 PF00005 ABC transporter FR848_10450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_10455 PF12911 N-terminal TM domain of oligopeptide transport permease C FR848_10455 PF00528 Binding-protein-dependent transport system inner membrane component FR848_10460 PF00528 Binding-protein-dependent transport system inner membrane component FR848_10465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_10470 PF00563 EAL domain FR848_10470 PF12792 CSS motif domain associated with EAL FR848_10475 PF00877 NlpC/P60 family FR848_10480 PF01569 PAP2 superfamily FR848_10485 PF02492 CobW/HypB/UreG, nucleotide-binding domain FR848_10485 PF07683 Cobalamin synthesis protein cobW C-terminal domain FR848_10490 PF01232 Mannitol dehydrogenase Rossmann domain FR848_10490 PF08125 Mannitol dehydrogenase C-terminal domain FR848_10495 PF09285 Elongation factor P, C-terminal FR848_10495 PF01132 Elongation factor P (EF-P) OB domain FR848_10495 PF08207 Elongation factor P (EF-P) KOW-like domain FR848_10500 PF03692 Putative zinc- or iron-chelating domain FR848_10505 PF07690 Major Facilitator Superfamily FR848_10510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_10510 PF00381 PTS HPr component phosphorylation site FR848_10515 PF00294 pfkB family carbohydrate kinase FR848_10520 PF02378 Phosphotransferase system, EIIC FR848_10520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_10525 PF00294 pfkB family carbohydrate kinase FR848_10530 PF04227 Indigoidine synthase A like protein FR848_10535 PF01773 Na+ dependent nucleoside transporter N-terminus FR848_10535 PF07662 Na+ dependent nucleoside transporter C-terminus FR848_10540 PF00294 pfkB family carbohydrate kinase FR848_10545 PF01261 Xylose isomerase-like TIM barrel FR848_10550 PF03601 Conserved hypothetical protein 698 FR848_10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_10555 PF03466 LysR substrate binding domain FR848_10560 PF00324 Amino acid permease FR848_10565 PF00593 TonB dependent receptor FR848_10565 PF07715 TonB-dependent Receptor Plug Domain FR848_10570 PF00756 Putative esterase FR848_10575 PF01227 GTP cyclohydrolase I FR848_10580 PF04235 Protein of unknown function (DUF418) FR848_10585 PF00356 Bacterial regulatory proteins, lacI family FR848_10590 PF13407 Periplasmic binding protein domain FR848_10595 PF00005 ABC transporter FR848_10600 PF02653 Branched-chain amino acid transport system / permease component FR848_10605 PF02698 DUF218 domain FR848_10610 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FR848_10610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FR848_10615 PF04172 LrgB-like family FR848_10620 PF03788 LrgA family FR848_10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_10625 PF03466 LysR substrate binding domain FR848_10630 PF07690 Major Facilitator Superfamily FR848_10635 PF07883 Cupin domain FR848_10640 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_10645 PF02798 Glutathione S-transferase, N-terminal domain FR848_10645 PF14497 Glutathione S-transferase, C-terminal domain FR848_10650 PF01494 FAD binding domain FR848_10655 PF01207 Dihydrouridine synthase (Dus) FR848_10660 PF00874 PRD domain FR848_10660 PF03123 CAT RNA binding domain FR848_10665 PF00367 phosphotransferase system, EIIB FR848_10665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FR848_10665 PF02378 Phosphotransferase system, EIIC FR848_10670 PF00232 Glycosyl hydrolase family 1 FR848_10675 PF08241 Methyltransferase domain FR848_10680 PF02321 Outer membrane efflux protein FR848_10685 PF09335 SNARE associated Golgi protein FR848_10690 PF04893 Yip1 domain FR848_10695 PF00768 D-alanyl-D-alanine carboxypeptidase FR848_10705 PF01565 FAD binding domain FR848_10705 PF09330 D-lactate dehydrogenase, membrane binding FR848_10710 PF14310 Fibronectin type III-like domain FR848_10710 PF00933 Glycosyl hydrolase family 3 N terminal domain FR848_10710 PF01915 Glycosyl hydrolase family 3 C-terminal domain FR848_10715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FR848_10720 PF00528 Binding-protein-dependent transport system inner membrane component FR848_10725 PF00005 ABC transporter FR848_10730 PF00528 Binding-protein-dependent transport system inner membrane component FR848_10740 PF13411 MerR HTH family regulatory protein FR848_10745 PF06580 Histidine kinase FR848_10745 PF07694 5TMR of 5TMR-LYT FR848_10750 PF04397 LytTr DNA-binding domain FR848_10750 PF00072 Response regulator receiver domain FR848_10755 PF07308 Protein of unknown function (DUF1456) FR848_10760 PF06998 Protein of unknown function (DUF1307) FR848_10765 PF01588 Putative tRNA binding domain FR848_10765 PF09334 tRNA synthetases class I (M) FR848_10770 PF10609 NUBPL iron-transfer P-loop NTPase FR848_10780 PF11776 Nickel/cobalt transporter regulator FR848_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_10785 PF03466 LysR substrate binding domain FR848_10790 PF00860 Permease family FR848_10795 PF13382 Adenine deaminase C-terminal domain FR848_10795 PF01979 Amidohydrolase family FR848_10800 PF03466 LysR substrate binding domain FR848_10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_10810 PF00753 Metallo-beta-lactamase superfamily FR848_10810 PF14863 Alkyl sulfatase dimerisation FR848_10810 PF14864 Alkyl sulfatase C-terminal FR848_10895 PF02110 Hydroxyethylthiazole kinase family FR848_10900 PF08543 Phosphomethylpyrimidine kinase FR848_10905 PF01791 DeoC/LacD family aldolase FR848_10915 PF00106 short chain dehydrogenase FR848_10920 PF00356 Bacterial regulatory proteins, lacI family FR848_10925 PF04198 Putative sugar-binding domain FR848_10930 PF08125 Mannitol dehydrogenase C-terminal domain FR848_10930 PF01232 Mannitol dehydrogenase Rossmann domain FR848_10935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_10935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_10940 PF07690 Major Facilitator Superfamily FR848_10945 PF13419 Haloacid dehalogenase-like hydrolase FR848_10950 PF13378 Enolase C-terminal domain-like FR848_10950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_10955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_10960 PF00528 Binding-protein-dependent transport system inner membrane component FR848_10970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_10970 PF00005 ABC transporter FR848_10975 PF00005 ABC transporter FR848_10975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_10990 PF00781 Diacylglycerol kinase catalytic domain FR848_11000 PF00486 Transcriptional regulatory protein, C terminal FR848_11000 PF00072 Response regulator receiver domain FR848_11005 PF00512 His Kinase A (phospho-acceptor) domain FR848_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_11005 PF00672 HAMP domain FR848_11010 PF07690 Major Facilitator Superfamily FR848_11015 PF00873 AcrB/AcrD/AcrF family FR848_11020 PF00873 AcrB/AcrD/AcrF family FR848_11025 PF13533 Biotin-lipoyl like FR848_11035 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_11040 PF00528 Binding-protein-dependent transport system inner membrane component FR848_11045 PF00528 Binding-protein-dependent transport system inner membrane component FR848_11050 PF01037 Lrp/AsnC ligand binding domain FR848_11060 PF00561 alpha/beta hydrolase fold FR848_11065 PF03472 Autoinducer binding domain FR848_11065 PF00196 Bacterial regulatory proteins, luxR family FR848_11070 PF00561 alpha/beta hydrolase fold FR848_11075 PF00528 Binding-protein-dependent transport system inner membrane component FR848_11080 PF12911 N-terminal TM domain of oligopeptide transport permease C FR848_11080 PF00528 Binding-protein-dependent transport system inner membrane component FR848_11085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_11085 PF00005 ABC transporter FR848_11090 PF00005 ABC transporter FR848_11090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_11095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_11100 PF00375 Sodium:dicarboxylate symporter family FR848_11115 PF00072 Response regulator receiver domain FR848_11115 PF00486 Transcriptional regulatory protein, C terminal FR848_11120 PF13493 Domain of unknown function (DUF4118) FR848_11120 PF13492 GAF domain FR848_11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_11120 PF02702 Osmosensitive K+ channel His kinase sensor domain FR848_11120 PF00512 His Kinase A (phospho-acceptor) domain FR848_11125 PF00285 Citrate synthase, C-terminal domain FR848_11130 PF00012 Hsp70 protein FR848_11135 PF06029 AlkA N-terminal domain FR848_11135 PF00730 HhH-GPD superfamily base excision DNA repair protein FR848_11140 PF00485 Phosphoribulokinase / Uridine kinase family FR848_11145 PF00692 dUTPase FR848_11150 PF05170 AsmA family FR848_11155 PF03741 Integral membrane protein TerC family FR848_11155 PF03471 Transporter associated domain FR848_11155 PF00571 CBS domain FR848_11160 PF00483 Nucleotidyl transferase FR848_11165 PF01569 PAP2 superfamily FR848_11175 PF14052 Capsule assembly protein Wzi FR848_11180 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FR848_11180 PF02563 Polysaccharide biosynthesis/export protein FR848_11180 PF10531 SLBB domain FR848_11185 PF01451 Low molecular weight phosphotyrosine protein phosphatase FR848_11190 PF13807 G-rich domain on putative tyrosine kinase FR848_11190 PF02706 Chain length determinant protein FR848_11190 PF13614 AAA domain FR848_11195 PF02397 Bacterial sugar transferase FR848_11220 PF00534 Glycosyl transferases group 1 FR848_11220 PF13439 Glycosyltransferase Family 4 FR848_11235 PF13737 Transposase DDE domain FR848_11245 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FR848_11245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FR848_11250 PF01050 Mannose-6-phosphate isomerase FR848_11250 PF00483 Nucleotidyl transferase FR848_11255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FR848_11255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FR848_11255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FR848_11255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FR848_11260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FR848_11260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FR848_11260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FR848_11270 PF01370 NAD dependent epimerase/dehydratase family FR848_11275 PF01061 ABC-2 type transporter FR848_11280 PF00005 ABC transporter FR848_11290 PF03275 UDP-galactopyranose mutase FR848_11305 PF00535 Glycosyl transferase family 2 FR848_11310 PF01502 Phosphoribosyl-AMP cyclohydrolase FR848_11310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FR848_11315 PF00977 Histidine biosynthesis protein FR848_11320 PF00977 Histidine biosynthesis protein FR848_11325 PF00117 Glutamine amidotransferase class-I FR848_11330 PF00475 Imidazoleglycerol-phosphate dehydratase FR848_11330 PF08645 Polynucleotide kinase 3 phosphatase FR848_11335 PF00155 Aminotransferase class I and II FR848_11340 PF00815 Histidinol dehydrogenase FR848_11345 PF08029 HisG, C-terminal domain FR848_11345 PF01634 ATP phosphoribosyltransferase FR848_11355 PF01370 NAD dependent epimerase/dehydratase family FR848_11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11360 PF03466 LysR substrate binding domain FR848_11370 PF13520 Amino acid permease FR848_11375 PF04891 NifQ FR848_11380 PF04055 Radical SAM superfamily FR848_11380 PF02579 Dinitrogenase iron-molybdenum cofactor FR848_11385 PF13185 GAF domain FR848_11385 PF02954 Bacterial regulatory protein, Fis family FR848_11385 PF00158 Sigma-54 interaction domain FR848_11390 PF00989 PAS fold FR848_11395 PF00258 Flavodoxin FR848_11400 PF00639 PPIC-type PPIASE domain FR848_11405 PF04319 NifZ domain FR848_11410 PF03206 Nitrogen fixation protein NifW FR848_11415 PF00682 HMGL-like FR848_11420 PF00266 Aminotransferase class-V FR848_11425 PF01592 NifU-like N terminal domain FR848_11425 PF01106 NifU-like domain FR848_11425 PF04324 BFD-like [2Fe-2S] binding domain FR848_11430 PF02579 Dinitrogenase iron-molybdenum cofactor FR848_11435 PF00148 Nitrogenase component 1 type Oxidoreductase FR848_11440 PF00148 Nitrogenase component 1 type Oxidoreductase FR848_11445 PF02579 Dinitrogenase iron-molybdenum cofactor FR848_11450 PF06988 NifT/FixU protein FR848_11455 PF00148 Nitrogenase component 1 type Oxidoreductase FR848_11455 PF11844 Domain of unknown function (DUF3364) FR848_11460 PF00148 Nitrogenase component 1 type Oxidoreductase FR848_11465 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family FR848_11470 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FR848_11470 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FR848_11470 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FR848_11470 PF10371 Domain of unknown function FR848_11470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_11470 PF12838 4Fe-4S dicluster domain FR848_11475 PF01022 Bacterial regulatory protein, arsR family FR848_11480 PF00009 Elongation factor Tu GTP binding domain FR848_11480 PF03764 Elongation factor G, domain IV FR848_11480 PF14492 Elongation Factor G, domain II FR848_11480 PF00679 Elongation factor G C-terminus FR848_11480 PF03144 Elongation factor Tu domain 2 FR848_11490 PF13358 DDE superfamily endonuclease FR848_11500 PF00768 D-alanyl-D-alanine carboxypeptidase FR848_11500 PF07943 Penicillin-binding protein 5, C-terminal domain FR848_11505 PF14052 Capsule assembly protein Wzi FR848_11510 PF06445 GyrI-like small molecule binding domain FR848_11515 PF04632 Fusaric acid resistance protein family FR848_11520 PF04363 Protein of unknown function (DUF496) FR848_11530 PF02654 Cobalamin-5-phosphate synthase FR848_11535 PF05221 S-adenosyl-L-homocysteine hydrolase FR848_11535 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FR848_11545 PF00083 Sugar (and other) transporter FR848_11550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_11550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_11555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_11555 PF00381 PTS HPr component phosphorylation site FR848_11560 PF01261 Xylose isomerase-like TIM barrel FR848_11565 PF00356 Bacterial regulatory proteins, lacI family FR848_11570 PF14552 Tautomerase enzyme FR848_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11575 PF03466 LysR substrate binding domain FR848_11585 PF00083 Sugar (and other) transporter FR848_11585 PF07690 Major Facilitator Superfamily FR848_11595 PF13188 PAS domain FR848_11595 PF03707 Bacterial signalling protein N terminal repeat FR848_11595 PF00990 Diguanylate cyclase, GGDEF domain FR848_11595 PF00563 EAL domain FR848_11600 PF09313 Domain of unknown function (DUF1971) FR848_11605 PF08956 Domain of unknown function (DUF1869) FR848_11610 PF07702 UTRA domain FR848_11610 PF00392 Bacterial regulatory proteins, gntR family FR848_11615 PF00367 phosphotransferase system, EIIB FR848_11615 PF02378 Phosphotransferase system, EIIC FR848_11620 PF02056 Family 4 glycosyl hydrolase FR848_11620 PF11975 Family 4 glycosyl hydrolase C-terminal domain FR848_11630 PF09160 FimH, mannose binding FR848_11630 PF00419 Fimbrial protein FR848_11640 PF00419 Fimbrial protein FR848_11645 PF00577 Outer membrane usher protein FR848_11645 PF13954 PapC N-terminal domain FR848_11645 PF13953 PapC C-terminal domain FR848_11650 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_11650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_11655 PF00419 Fimbrial protein FR848_11660 PF00419 Fimbrial protein FR848_11665 PF00196 Bacterial regulatory proteins, luxR family FR848_11665 PF00072 Response regulator receiver domain FR848_11685 PF03466 LysR substrate binding domain FR848_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11690 PF03466 LysR substrate binding domain FR848_11695 PF03734 L,D-transpeptidase catalytic domain FR848_11695 PF17969 L,D-transpeptidase C-terminal domain FR848_11705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11705 PF03466 LysR substrate binding domain FR848_11710 PF00248 Aldo/keto reductase family FR848_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11715 PF03466 LysR substrate binding domain FR848_11740 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FR848_11870 PF13356 Arm DNA-binding domain FR848_11870 PF00589 Phage integrase family FR848_11880 PF01554 MatE FR848_11895 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FR848_11895 PF01048 Phosphorylase superfamily FR848_11915 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FR848_11925 PF00873 AcrB/AcrD/AcrF family FR848_11930 PF13533 Biotin-lipoyl like FR848_11935 PF00582 Universal stress protein family FR848_11940 PF00690 Cation transporter/ATPase, N-terminus FR848_11940 PF00689 Cation transporting ATPase, C-terminus FR848_11945 PF00756 Putative esterase FR848_11955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11955 PF03466 LysR substrate binding domain FR848_11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_11960 PF03466 LysR substrate binding domain FR848_11965 PF01042 Endoribonuclease L-PSP FR848_11970 PF00107 Zinc-binding dehydrogenase FR848_11970 PF08240 Alcohol dehydrogenase GroES-like domain FR848_11980 PF06167 Glucose-regulated metallo-peptidase M90 FR848_11995 PF00535 Glycosyl transferase family 2 FR848_12005 PF00267 Gram-negative porin FR848_12015 PF01966 HD domain FR848_12020 PF00145 C-5 cytosine-specific DNA methylase FR848_12020 PF18284 DNA methylase N-terminal domain FR848_12025 PF03852 DNA mismatch endonuclease Vsr FR848_12030 PF00892 EamA-like transporter family FR848_12035 PF05661 Protein of unknown function (DUF808) FR848_12040 PF09926 Uncharacterized small protein (DUF2158) FR848_12045 PF17151 Periplasmic sensor domain FR848_12045 PF00990 Diguanylate cyclase, GGDEF domain FR848_12050 PF10733 Protein of unknown function (DUF2525) FR848_12055 PF10781 Dextransucrase DSRB FR848_12060 PF00196 Bacterial regulatory proteins, luxR family FR848_12065 PF13987 YedD-like protein FR848_12070 PF02806 Alpha amylase, C-terminal all-beta domain FR848_12070 PF00128 Alpha amylase, catalytic domain FR848_12080 PF00291 Pyridoxal-phosphate dependent enzyme FR848_12095 PF03472 Autoinducer binding domain FR848_12095 PF00196 Bacterial regulatory proteins, luxR family FR848_12100 PF10769 Protein of unknown function (DUF2594) FR848_12105 PF00196 Bacterial regulatory proteins, luxR family FR848_12105 PF00072 Response regulator receiver domain FR848_12110 PF01541 GIY-YIG catalytic domain FR848_12110 PF02151 UvrB/uvrC motif FR848_12110 PF08459 UvrC Helix-hairpin-helix N-terminal FR848_12115 PF01066 CDP-alcohol phosphatidyltransferase FR848_12135 PF00701 Dihydrodipicolinate synthetase family FR848_12140 PF03695 Uncharacterised protein family (UPF0149) FR848_12140 PF02810 SEC-C motif FR848_12145 PF03222 Tryptophan/tyrosine permease family FR848_12150 PF10678 Protein of unknown function (DUF2492) FR848_12155 PF00210 Ferritin-like domain FR848_12165 PF07690 Major Facilitator Superfamily FR848_12175 PF10964 Protein of unknown function (DUF2766) FR848_12185 PF00210 Ferritin-like domain FR848_12195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR848_12200 PF00005 ABC transporter FR848_12205 PF02653 Branched-chain amino acid transport system / permease component FR848_12210 PF02358 Trehalose-phosphatase FR848_12215 PF00982 Glycosyltransferase family 20 FR848_12220 PF00582 Universal stress protein family FR848_12235 PF07470 Glycosyl Hydrolase Family 88 FR848_12240 PF05746 DALR anticodon binding domain FR848_12240 PF00750 tRNA synthetases class I (R) FR848_12240 PF03485 Arginyl tRNA synthetase N terminal domain FR848_12245 PF06185 YecM protein FR848_12250 PF03932 CutC family FR848_12255 PF08003 Protein of unknown function (DUF1698) FR848_12260 PF13649 Methyltransferase domain FR848_12265 PF01124 MAPEG family FR848_12270 PF01904 Protein of unknown function DUF72 FR848_12275 PF00857 Isochorismatase family FR848_12280 PF01336 OB-fold nucleic acid binding domain FR848_12280 PF00152 tRNA synthetases class II (D, K and N) FR848_12280 PF02938 GAD domain FR848_12285 PF00293 NUDIX domain FR848_12290 PF01709 Transcriptional regulator FR848_12295 PF02075 Crossover junction endodeoxyribonuclease RuvC FR848_12300 PF01330 RuvA N terminal domain FR848_12300 PF07499 RuvA, C-terminal domain FR848_12305 PF05491 RuvB C-terminal winged helix domain FR848_12305 PF17864 RuvB AAA lid domain FR848_12305 PF05496 Holliday junction DNA helicase RuvB P-loop domain FR848_12310 PF00950 ABC 3 transport family FR848_12315 PF00005 ABC transporter FR848_12320 PF01297 Zinc-uptake complex component A periplasmic FR848_12325 PF01476 LysM domain FR848_12325 PF08525 Opacity-associated protein A N-terminal motif FR848_12325 PF01551 Peptidase family M23 FR848_12330 PF03279 Bacterial lipid A biosynthesis acyltransferase FR848_12335 PF00072 Response regulator receiver domain FR848_12340 PF03949 Malic enzyme, NAD binding domain FR848_12340 PF00390 Malic enzyme, N-terminal domain FR848_12345 PF03547 Membrane transport protein FR848_12350 PF03390 2-hydroxycarboxylate transporter family FR848_12355 PF02887 Pyruvate kinase, alpha/beta domain FR848_12355 PF00224 Pyruvate kinase, barrel domain FR848_12360 PF01380 SIS domain FR848_12360 PF01418 Helix-turn-helix domain, rpiR family FR848_12365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FR848_12365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FR848_12370 PF00920 Dehydratase family FR848_12375 PF01081 KDPG and KHG aldolase FR848_12380 PF02222 ATP-grasp domain FR848_12385 PF07130 YebG protein FR848_12390 PF04391 Protein of unknown function (DUF533) FR848_12395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FR848_12395 PF00326 Prolyl oligopeptidase family FR848_12400 PF00929 Exonuclease FR848_12405 PF06440 DNA polymerase III, theta subunit FR848_12410 PF04234 CopC domain FR848_12415 PF05425 Copper resistance protein D FR848_12420 PF10709 Protein of unknown function (DUF2511) FR848_12455 PF04393 Protein of unknown function (DUF535) FR848_12460 PF00149 Calcineurin-like phosphoesterase FR848_12465 PF07358 Protein of unknown function (DUF1482) FR848_12470 PF07351 Protein of unknown function (DUF1480) FR848_12475 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FR848_12475 PF01189 16S rRNA methyltransferase RsmB/F FR848_12475 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FR848_12480 PF02470 MlaD protein FR848_12485 PF04403 Paraquat-inducible protein A FR848_12490 PF13185 GAF domain FR848_12495 PF17516 ProQ C-terminal domain FR848_12495 PF04352 ProQ/FINO family FR848_12500 PF00595 PDZ domain FR848_12500 PF17804 Tail specific protease N-terminal domain FR848_12500 PF03572 Peptidase family S41 FR848_12500 PF11818 C-terminal domain of tail specific protease (DUF3340) FR848_12505 PF01435 Peptidase family M48 FR848_12510 PF07690 Major Facilitator Superfamily FR848_12515 PF09339 IclR helix-turn-helix domain FR848_12515 PF01614 Bacterial transcriptional regulator FR848_12520 PF13996 YobH-like protein FR848_12525 PF13998 MgrB protein FR848_12530 PF13974 YebO-like protein FR848_12535 PF10736 Protein of unknown function (DUF2627) FR848_12540 PF00313 'Cold-shock' DNA-binding domain FR848_12545 PF00905 Penicillin binding protein transpeptidase domain FR848_12545 PF03717 Penicillin-binding Protein dimerisation domain FR848_12550 PF13847 Methyltransferase domain FR848_12555 PF02659 Putative manganese efflux pump FR848_12560 PF06173 Protein of unknown function (DUF986) FR848_12565 PF03613 PTS system mannose/fructose/sorbose family IID component FR848_12570 PF03609 PTS system sorbose-specific iic component FR848_12575 PF03610 PTS system fructose IIA component FR848_12575 PF03830 PTS system sorbose subfamily IIB component FR848_12580 PF03741 Integral membrane protein TerC family FR848_12580 PF03471 Transporter associated domain FR848_12585 PF12792 CSS motif domain associated with EAL FR848_12585 PF00563 EAL domain FR848_12590 PF03315 Serine dehydratase beta chain FR848_12590 PF03313 Serine dehydratase alpha chain FR848_12595 PF00293 NUDIX domain FR848_12600 PF00425 chorismate binding enzyme FR848_12600 PF04715 Anthranilate synthase component I, N terminal region FR848_12605 PF03701 Uncharacterised protein family (UPF0181) FR848_12610 PF07940 Heparinase II/III-like protein FR848_12610 PF05426 Alginate lyase FR848_12620 PF01547 Bacterial extracellular solute-binding protein FR848_12630 PF00528 Binding-protein-dependent transport system inner membrane component FR848_12635 PF00005 ABC transporter FR848_12635 PF03459 TOBE domain FR848_12635 PF17912 MalK OB fold domain FR848_12645 PF01042 Endoribonuclease L-PSP FR848_12650 PF13307 Helicase C-terminal domain FR848_12650 PF04851 Type III restriction enzyme, res subunit FR848_12655 PF00814 Glycoprotease family FR848_12660 PF03843 Outer membrane lipoprotein Slp family FR848_12665 PF13193 AMP-binding enzyme C-terminal domain FR848_12665 PF00501 AMP-binding enzyme FR848_12670 PF01612 3'-5' exonuclease FR848_12670 PF00570 HRDC domain FR848_12675 PF03776 Septum formation topological specificity factor MinE FR848_12680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FR848_12685 PF05209 Septum formation inhibitor MinC, N-terminal domain FR848_12685 PF03775 Septum formation inhibitor MinC, C-terminal domain FR848_12690 PF05166 YcgL domain FR848_12695 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_12700 PF03692 Putative zinc- or iron-chelating domain FR848_12710 PF02600 Disulfide bond formation protein DsbB FR848_12715 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FR848_12720 PF07840 FadR C-terminal domain FR848_12720 PF00392 Bacterial regulatory proteins, gntR family FR848_12725 PF01797 Transposase IS200 like FR848_12730 PF04293 SpoVR like protein FR848_12735 PF01266 FAD dependent oxidoreductase FR848_12740 PF00842 Alanine racemase, C-terminal domain FR848_12740 PF01168 Alanine racemase, N-terminal domain FR848_12745 PF02080 TrkA-C domain FR848_12745 PF03471 Transporter associated domain FR848_12745 PF00999 Sodium/hydrogen exchanger family FR848_12750 PF02016 LD-carboxypeptidase N-terminal domain FR848_12750 PF17676 LD-carboxypeptidase C-terminal domain FR848_12755 PF01464 Transglycosylase SLT domain FR848_12760 PF01204 Trehalase FR848_12785 PF14403 Circularly permuted ATP-grasp type 2 FR848_12810 PF07690 Major Facilitator Superfamily FR848_12835 PF00528 Binding-protein-dependent transport system inner membrane component FR848_12840 PF00528 Binding-protein-dependent transport system inner membrane component FR848_12845 PF00571 CBS domain FR848_12845 PF00005 ABC transporter FR848_12850 PF00849 RNA pseudouridylate synthase FR848_12855 PF03466 LysR substrate binding domain FR848_12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_12860 PF01293 Phosphoenolpyruvate carboxykinase FR848_12870 PF08212 Lipocalin-like domain FR848_12875 PF00576 HIUase/Transthyretin family FR848_12880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_12880 PF00381 PTS HPr component phosphorylation site FR848_12885 PF00083 Sugar (and other) transporter FR848_12890 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_12890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FR848_12890 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FR848_12890 PF01799 [2Fe-2S] binding domain FR848_12895 PF01799 [2Fe-2S] binding domain FR848_12895 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_12900 PF12804 MobA-like NTP transferase domain FR848_12910 PF00860 Permease family FR848_12920 PF13247 4Fe-4S dicluster domain FR848_12925 PF01979 Amidohydrolase family FR848_12930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_12930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FR848_12935 PF13478 XdhC Rossmann domain FR848_12935 PF02625 XdhC and CoxI family FR848_12940 PF00696 Amino acid kinase family FR848_12945 PF01979 Amidohydrolase family FR848_12950 PF07687 Peptidase dimerisation domain FR848_12950 PF01546 Peptidase family M20/M25/M40 FR848_12955 PF00291 Pyridoxal-phosphate dependent enzyme FR848_12960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FR848_12960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FR848_12975 PF02661 Fic/DOC family FR848_12980 PF00589 Phage integrase family FR848_12980 PF13356 Arm DNA-binding domain FR848_12985 PF01926 50S ribosome-binding GTPase FR848_12985 PF06071 Protein of unknown function (DUF933) FR848_12990 PF01195 Peptidyl-tRNA hydrolase FR848_12995 PF10762 Protein of unknown function (DUF2583) FR848_13005 PF01740 STAS domain FR848_13005 PF00916 Sulfate permease family FR848_13010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FR848_13010 PF14572 Phosphoribosyl synthetase-associated domain FR848_13015 PF00288 GHMP kinases N terminal domain FR848_13015 PF08544 GHMP kinases C terminal FR848_13020 PF03550 Outer membrane lipoprotein LolB FR848_13025 PF01488 Shikimate / quinate 5-dehydrogenase FR848_13025 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FR848_13025 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FR848_13030 PF03462 PCRF domain FR848_13030 PF00472 RF-1 domain FR848_13035 PF13847 Methyltransferase domain FR848_13035 PF17827 PrmC N-terminal domain FR848_13040 PF04247 Invasion gene expression up-regulator, SirB FR848_13045 PF13369 Transglutaminase-like superfamily FR848_13050 PF00793 DAHP synthetase I family FR848_13055 PF01699 Sodium/calcium exchanger protein FR848_13060 PF06150 ChaB FR848_13065 PF04752 ChaC-like protein FR848_13075 PF02635 DsrE/DsrF-like family FR848_13080 PF08376 Nitrate and nitrite sensing FR848_13080 PF03861 ANTAR domain FR848_13090 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13095 PF00005 ABC transporter FR848_13100 PF18267 Rubredoxin NAD+ reductase C-terminal domain FR848_13100 PF04324 BFD-like [2Fe-2S] binding domain FR848_13100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FR848_13100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FR848_13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_13100 PF13806 Rieske-like [2Fe-2S] domain FR848_13105 PF01568 Molydopterin dinucleotide binding domain FR848_13105 PF00384 Molybdopterin oxidoreductase FR848_13105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR848_13105 PF04324 BFD-like [2Fe-2S] binding domain FR848_13110 PF11924 Inverse autotransporter, beta-domain FR848_13115 PF00072 Response regulator receiver domain FR848_13115 PF00196 Bacterial regulatory proteins, luxR family FR848_13120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_13120 PF00672 HAMP domain FR848_13120 PF07730 Histidine kinase FR848_13120 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FR848_13125 PF07690 Major Facilitator Superfamily FR848_13130 PF00384 Molybdopterin oxidoreductase FR848_13130 PF01568 Molydopterin dinucleotide binding domain FR848_13130 PF14710 Respiratory nitrate reductase alpha N-terminal FR848_13135 PF13247 4Fe-4S dicluster domain FR848_13135 PF14711 Respiratory nitrate reductase beta C-terminal FR848_13140 PF02613 Nitrate reductase delta subunit FR848_13145 PF02665 Nitrate reductase gamma subunit FR848_13175 PF00551 Formyl transferase FR848_13175 PF01842 ACT domain FR848_13180 PF02810 SEC-C motif FR848_13185 PF01734 Patatin-like phospholipase FR848_13190 PF00072 Response regulator receiver domain FR848_13195 PF00483 Nucleotidyl transferase FR848_13200 PF00816 H-NS histone family FR848_13210 PF00265 Thymidine kinase FR848_13215 PF00465 Iron-containing alcohol dehydrogenase FR848_13215 PF00171 Aldehyde dehydrogenase family FR848_13220 PF01914 MarC family integral membrane protein FR848_13230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_13235 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13240 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13240 PF12911 N-terminal TM domain of oligopeptide transport permease C FR848_13245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_13245 PF00005 ABC transporter FR848_13250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_13250 PF00005 ABC transporter FR848_13255 PF00027 Cyclic nucleotide-binding domain FR848_13255 PF00520 Ion transport protein FR848_13260 PF04269 Protein of unknown function, DUF440 FR848_13265 PF13091 PLD-like domain FR848_13265 PF13396 Phospholipase_D-nuclease N-terminal FR848_13275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR848_13280 PF03795 YCII-related domain FR848_13285 PF03544 Gram-negative bacterial TonB protein C-terminal FR848_13295 PF11080 Endoribonuclease GhoS FR848_13300 PF00294 pfkB family carbohydrate kinase FR848_13305 PF04338 Protein of unknown function, DUF481 FR848_13320 PF03129 Anticodon binding domain FR848_13320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FR848_13320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FR848_13320 PF02824 TGS domain FR848_13325 PF05198 Translation initiation factor IF-3, N-terminal domain FR848_13325 PF00707 Translation initiation factor IF-3, C-terminal domain FR848_13330 PF01632 Ribosomal protein L35 FR848_13335 PF00453 Ribosomal protein L20 FR848_13350 PF01409 tRNA synthetases class II core domain (F) FR848_13350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FR848_13355 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FR848_13355 PF03483 B3/4 domain FR848_13355 PF01588 Putative tRNA binding domain FR848_13355 PF03147 Ferredoxin-fold anticodon binding domain FR848_13355 PF03484 tRNA synthetase B5 domain FR848_13360 PF00216 Bacterial DNA-binding protein FR848_13365 PF01032 FecCD transport family FR848_13370 PF03180 NLPA lipoprotein FR848_13375 PF00255 Glutathione peroxidase FR848_13380 PF00005 ABC transporter FR848_13385 PF00877 NlpC/P60 family FR848_13390 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FR848_13395 PF10636 Hemin uptake protein hemP FR848_13400 PF00793 DAHP synthetase I family FR848_13405 PF03618 Kinase/pyrophosphorylase FR848_13410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FR848_13410 PF02896 PEP-utilising enzyme, TIM barrel domain FR848_13410 PF00391 PEP-utilising enzyme, mobile domain FR848_13420 PF01594 AI-2E family transporter FR848_13425 PF13183 4Fe-4S dicluster domain FR848_13425 PF01565 FAD binding domain FR848_13425 PF02913 FAD linked oxidases, C-terminal domain FR848_13430 PF03061 Thioesterase superfamily FR848_13435 PF04226 Transglycosylase associated protein FR848_13440 PF15977 Winged helix-turn-helix DNA binding FR848_13445 PF15977 Winged helix-turn-helix DNA binding FR848_13450 PF00419 Fimbrial protein FR848_13455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_13455 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_13460 PF00577 Outer membrane usher protein FR848_13460 PF13953 PapC C-terminal domain FR848_13460 PF13954 PapC N-terminal domain FR848_13480 PF01521 Iron-sulphur cluster biosynthesis FR848_13485 PF01458 Uncharacterized protein family (UPF0051) FR848_13490 PF00005 ABC transporter FR848_13495 PF01458 Uncharacterized protein family (UPF0051) FR848_13500 PF00266 Aminotransferase class-V FR848_13505 PF02657 Fe-S metabolism associated domain FR848_13510 PF03734 L,D-transpeptidase catalytic domain FR848_13510 PF01476 LysM domain FR848_13510 PF17969 L,D-transpeptidase C-terminal domain FR848_13515 PF04728 Lipoprotein leucine-zipper FR848_13520 PF00224 Pyruvate kinase, barrel domain FR848_13520 PF02887 Pyruvate kinase, alpha/beta domain FR848_13525 PF10965 Protein of unknown function (DUF2767) FR848_13540 PF07690 Major Facilitator Superfamily FR848_13545 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FR848_13545 PF08501 Shikimate dehydrogenase substrate binding domain FR848_13545 PF01488 Shikimate / quinate 5-dehydrogenase FR848_13570 PF09339 IclR helix-turn-helix domain FR848_13570 PF01614 Bacterial transcriptional regulator FR848_13575 PF01494 FAD binding domain FR848_13580 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FR848_13585 PF12697 Alpha/beta hydrolase family FR848_13590 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_13595 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR848_13595 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FR848_13600 PF07836 DmpG-like communication domain FR848_13600 PF00682 HMGL-like FR848_13605 PF07690 Major Facilitator Superfamily FR848_13625 PF05995 Cysteine dioxygenase type I FR848_13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_13630 PF03466 LysR substrate binding domain FR848_13635 PF00296 Luciferase-like monooxygenase FR848_13640 PF02770 Acyl-CoA dehydrogenase, middle domain FR848_13640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR848_13640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FR848_13655 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13660 PF00005 ABC transporter FR848_13665 PF07715 TonB-dependent Receptor Plug Domain FR848_13670 PF00005 ABC transporter FR848_13675 PF01032 FecCD transport family FR848_13680 PF01032 FecCD transport family FR848_13695 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_13700 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13705 PF00005 ABC transporter FR848_13715 PF01546 Peptidase family M20/M25/M40 FR848_13715 PF07687 Peptidase dimerisation domain FR848_13720 PF01568 Molydopterin dinucleotide binding domain FR848_13720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR848_13720 PF00384 Molybdopterin oxidoreductase FR848_13725 PF02615 Malate/L-lactate dehydrogenase FR848_13750 PF13677 Membrane MotB of proton-channel complex MotA/MotB FR848_13750 PF00691 OmpA family FR848_13865 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13875 PF00106 short chain dehydrogenase FR848_13880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_13880 PF00205 Thiamine pyrophosphate enzyme, central domain FR848_13880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_13885 PF03306 Alpha-acetolactate decarboxylase FR848_13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_13890 PF03466 LysR substrate binding domain FR848_13895 PF00313 'Cold-shock' DNA-binding domain FR848_13925 PF00589 Phage integrase family FR848_13935 PF00419 Fimbrial protein FR848_13940 PF13953 PapC C-terminal domain FR848_13940 PF13954 PapC N-terminal domain FR848_13940 PF00577 Outer membrane usher protein FR848_13945 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_13945 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_13955 PF00589 Phage integrase family FR848_13960 PF13360 PQQ-like domain FR848_13960 PF01011 PQQ enzyme repeat FR848_13965 PF00005 ABC transporter FR848_13965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_13970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_13970 PF00005 ABC transporter FR848_13975 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13980 PF00528 Binding-protein-dependent transport system inner membrane component FR848_13985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_13995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR848_14000 PF08220 DeoR-like helix-turn-helix domain FR848_14000 PF00455 DeoR C terminal sensor domain FR848_14010 PF00484 Carbonic anhydrase FR848_14025 PF04076 Bacterial OB fold (BOF) protein FR848_14030 PF13454 FAD-NAD(P)-binding FR848_14045 PF04239 Protein of unknown function (DUF421) FR848_14050 PF02464 Competence-damaged protein FR848_14055 PF00106 short chain dehydrogenase FR848_14060 PF16657 Maltogenic Amylase, C-terminal domain FR848_14060 PF00128 Alpha amylase, catalytic domain FR848_14065 PF02322 Cytochrome bd terminal oxidase subunit II FR848_14070 PF01654 Cytochrome bd terminal oxidase subunit I FR848_14075 PF05067 Manganese containing catalase FR848_14080 PF05974 Domain of unknown function (DUF892) FR848_14085 PF05974 Domain of unknown function (DUF892) FR848_14090 PF10685 Stress-induced bacterial acidophilic repeat motif FR848_14110 PF01554 MatE FR848_14115 PF00677 Lumazine binding domain FR848_14125 PF07690 Major Facilitator Superfamily FR848_14130 PF03466 LysR substrate binding domain FR848_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_14135 PF00356 Bacterial regulatory proteins, lacI family FR848_14145 PF07690 Major Facilitator Superfamily FR848_14150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FR848_14150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FR848_14155 PF00877 NlpC/P60 family FR848_14160 PF00462 Glutaredoxin FR848_14165 PF00929 Exonuclease FR848_14170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR848_14175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR848_14180 PF16925 Tetracyclin repressor-like, C-terminal domain FR848_14180 PF00440 Bacterial regulatory proteins, tetR family FR848_14185 PF06945 Protein of unknown function (DUF1289) FR848_14190 PF00248 Aldo/keto reductase family FR848_14195 PF00080 Copper/zinc superoxide dismutase (SODC) FR848_14205 PF00529 HlyD membrane-fusion protein of T1SS FR848_14205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_14210 PF07869 Protein of unknown function (DUF1656) FR848_14215 PF01047 MarR family FR848_14220 PF00990 Diguanylate cyclase, GGDEF domain FR848_14220 PF17158 Membrane-associated sensor, integral membrane domain FR848_14225 PF05433 Glycine zipper 2TM domain FR848_14230 PF03702 Anhydro-N-acetylmuramic acid kinase FR848_14235 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FR848_14240 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FR848_14240 PF01243 Pyridoxamine 5'-phosphate oxidase FR848_14245 PF00579 tRNA synthetases class I (W and Y) FR848_14250 PF08543 Phosphomethylpyrimidine kinase FR848_14255 PF02798 Glutathione S-transferase, N-terminal domain FR848_14255 PF00043 Glutathione S-transferase, C-terminal domain FR848_14260 PF00854 POT family FR848_14265 PF00730 HhH-GPD superfamily base excision DNA repair protein FR848_14265 PF00633 Helix-hairpin-helix motif FR848_14265 PF10576 Iron-sulfur binding domain of endonuclease III FR848_14270 PF02508 Rnf-Nqr subunit, membrane protein FR848_14275 PF04205 FMN-binding domain FR848_14280 PF03116 NQR2, RnfD, RnfE family FR848_14285 PF12838 4Fe-4S dicluster domain FR848_14285 PF13375 RnfC Barrel sandwich hybrid domain FR848_14285 PF10531 SLBB domain FR848_14285 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FR848_14290 PF04060 Putative Fe-S cluster FR848_14295 PF02508 Rnf-Nqr subunit, membrane protein FR848_14300 PF10754 Protein of unknown function (DUF2569) FR848_14305 PF05321 Haemolysin expression modulating protein FR848_14310 PF00232 Glycosyl hydrolase family 1 FR848_14320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_14320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_14325 PF00962 Adenosine/AMP deaminase FR848_14330 PF03180 NLPA lipoprotein FR848_14335 PF01206 Sulfurtransferase TusA FR848_14340 PF04143 Sulphur transport FR848_14345 PF14001 YdfZ protein FR848_14350 PF00155 Aminotransferase class I and II FR848_14355 PF02378 Phosphotransferase system, EIIC FR848_14355 PF00367 phosphotransferase system, EIIB FR848_14360 PF00356 Bacterial regulatory proteins, lacI family FR848_14360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR848_14365 PF06097 Bacterial protein of unknown function (DUF945) FR848_14370 PF01238 Phosphomannose isomerase type I FR848_14375 PF05683 Fumarase C-terminus FR848_14375 PF05681 Fumarate hydratase (Fumerase) FR848_14380 PF10415 Fumarase C C-terminus FR848_14380 PF00206 Lyase FR848_14385 PF05472 DNA replication terminus site-binding protein (Ter protein) FR848_14390 PF00512 His Kinase A (phospho-acceptor) domain FR848_14390 PF00672 HAMP domain FR848_14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_14405 PF00255 Glutathione peroxidase FR848_14410 PF00563 EAL domain FR848_14410 PF03707 Bacterial signalling protein N terminal repeat FR848_14410 PF00990 Diguanylate cyclase, GGDEF domain FR848_14415 PF00486 Transcriptional regulatory protein, C terminal FR848_14415 PF00072 Response regulator receiver domain FR848_14430 PF06942 GlpM protein FR848_14440 PF13520 Amino acid permease FR848_14445 PF07338 Protein of unknown function (DUF1471) FR848_14455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FR848_14455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FR848_14455 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FR848_14460 PF02233 NAD(P) transhydrogenase beta subunit FR848_14465 PF15930 Domain of unknown function FR848_14470 PF00582 Universal stress protein family FR848_14475 PF00027 Cyclic nucleotide-binding domain FR848_14475 PF00325 Bacterial regulatory proteins, crp family FR848_14480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FR848_14480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FR848_14485 PF03806 AbgT putative transporter family FR848_14490 PF01546 Peptidase family M20/M25/M40 FR848_14495 PF01546 Peptidase family M20/M25/M40 FR848_14495 PF07687 Peptidase dimerisation domain FR848_14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_14500 PF03466 LysR substrate binding domain FR848_14505 PF01713 Smr domain FR848_14510 PF09339 IclR helix-turn-helix domain FR848_14510 PF01614 Bacterial transcriptional regulator FR848_14515 PF01144 Coenzyme A transferase FR848_14520 PF01144 Coenzyme A transferase FR848_14525 PF02803 Thiolase, C-terminal domain FR848_14525 PF00108 Thiolase, N-terminal domain FR848_14530 PF10397 Adenylosuccinate lyase C-terminus FR848_14530 PF00206 Lyase FR848_14535 PF12146 Serine aminopeptidase, S33 FR848_14540 PF02627 Carboxymuconolactone decarboxylase family FR848_14545 PF05683 Fumarase C-terminus FR848_14545 PF05681 Fumarate hydratase (Fumerase) FR848_14550 PF00939 Sodium:sulfate symporter transmembrane region FR848_14555 PF00890 FAD binding domain FR848_14555 PF14537 Cytochrome c3 FR848_14560 PF02424 ApbE family FR848_14565 PF00072 Response regulator receiver domain FR848_14570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_14570 PF00989 PAS fold FR848_14570 PF17203 Single cache domain 3 FR848_14570 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FR848_14575 PF03466 LysR substrate binding domain FR848_14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_14585 PF13580 SIS domain FR848_14590 PF06039 Malate:quinone oxidoreductase (Mqo) FR848_14595 PF03466 LysR substrate binding domain FR848_14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_14600 PF00698 Acyl transferase domain FR848_14605 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FR848_14610 PF03547 Membrane transport protein FR848_14620 PF01039 Carboxyl transferase domain FR848_14625 PF06857 Malonate decarboxylase delta subunit (MdcD) FR848_14630 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FR848_14635 PF16957 Malonate decarboxylase, alpha subunit, transporter FR848_14640 PF01594 AI-2E family transporter FR848_14650 PF00893 Small Multidrug Resistance protein FR848_14655 PF00893 Small Multidrug Resistance protein FR848_14660 PF00990 Diguanylate cyclase, GGDEF domain FR848_14660 PF03707 Bacterial signalling protein N terminal repeat FR848_14660 PF00563 EAL domain FR848_14665 PF00089 Trypsin FR848_14685 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FR848_14690 PF07690 Major Facilitator Superfamily FR848_14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_14695 PF03466 LysR substrate binding domain FR848_14700 PF00480 ROK family FR848_14710 PF00654 Voltage gated chloride channel FR848_14715 PF02613 Nitrate reductase delta subunit FR848_14720 PF04976 DMSO reductase anchor subunit (DmsC) FR848_14725 PF13247 4Fe-4S dicluster domain FR848_14725 PF12800 4Fe-4S binding domain FR848_14730 PF01568 Molydopterin dinucleotide binding domain FR848_14730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR848_14730 PF00384 Molybdopterin oxidoreductase FR848_14735 PF06649 Protein of unknown function (DUF1161) FR848_14740 PF06788 Uncharacterised protein family (UPF0257) FR848_14745 PF13302 Acetyltransferase (GNAT) domain FR848_14750 PF06932 Protein of unknown function (DUF1283) FR848_14755 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FR848_14760 PF13378 Enolase C-terminal domain-like FR848_14760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_14765 PF08240 Alcohol dehydrogenase GroES-like domain FR848_14765 PF00107 Zinc-binding dehydrogenase FR848_14770 PF00083 Sugar (and other) transporter FR848_14770 PF07690 Major Facilitator Superfamily FR848_14775 PF08125 Mannitol dehydrogenase C-terminal domain FR848_14775 PF01232 Mannitol dehydrogenase Rossmann domain FR848_14780 PF00582 Universal stress protein family FR848_14785 PF07729 FCD domain FR848_14785 PF00392 Bacterial regulatory proteins, gntR family FR848_14790 PF00106 short chain dehydrogenase FR848_14795 PF01432 Peptidase family M3 FR848_14810 PF01432 Peptidase family M3 FR848_14830 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FR848_14860 PF01306 LacY proton/sugar symporter FR848_14865 PF16353 Domain of unknown function(DUF4981) FR848_14865 PF00703 Glycosyl hydrolases family 2 FR848_14865 PF02929 Beta galactosidase small chain FR848_14865 PF02837 Glycosyl hydrolases family 2, sugar binding domain FR848_14865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FR848_14870 PF00356 Bacterial regulatory proteins, lacI family FR848_14880 PF00563 EAL domain FR848_14880 PF04940 Sensors of blue-light using FAD FR848_14900 PF08267 Cobalamin-independent synthase, N-terminal domain FR848_14900 PF01717 Cobalamin-independent synthase, Catalytic domain FR848_14915 PF01965 DJ-1/PfpI family FR848_14925 PF01717 Cobalamin-independent synthase, Catalytic domain FR848_14930 PF00158 Sigma-54 interaction domain FR848_14930 PF13188 PAS domain FR848_14930 PF02954 Bacterial regulatory protein, Fis family FR848_14935 PF02653 Branched-chain amino acid transport system / permease component FR848_14940 PF02653 Branched-chain amino acid transport system / permease component FR848_14945 PF00005 ABC transporter FR848_14945 PF12399 Branched-chain amino acid ATP-binding cassette transporter FR848_14950 PF00005 ABC transporter FR848_14965 PF07690 Major Facilitator Superfamily FR848_14970 PF00892 EamA-like transporter family FR848_14975 PF13999 MarB protein FR848_14980 PF12833 Helix-turn-helix domain FR848_14985 PF01047 MarR family FR848_14990 PF01914 MarC family integral membrane protein FR848_14995 PF07690 Major Facilitator Superfamily FR848_15000 PF02567 Phenazine biosynthesis-like protein FR848_15005 PF02567 Phenazine biosynthesis-like protein FR848_15010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FR848_15010 PF00056 lactate/malate dehydrogenase, NAD binding domain FR848_15015 PF00583 Acetyltransferase (GNAT) family FR848_15020 PF03466 LysR substrate binding domain FR848_15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_15025 PF00171 Aldehyde dehydrogenase family FR848_15030 PF04960 Glutaminase FR848_15035 PF13811 Domain of unknown function (DUF4186) FR848_15040 PF00990 Diguanylate cyclase, GGDEF domain FR848_15050 PF08125 Mannitol dehydrogenase C-terminal domain FR848_15050 PF01232 Mannitol dehydrogenase Rossmann domain FR848_15065 PF13649 Methyltransferase domain FR848_15090 PF00529 HlyD membrane-fusion protein of T1SS FR848_15090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_15095 PF00873 AcrB/AcrD/AcrF family FR848_15105 PF07690 Major Facilitator Superfamily FR848_15125 PF01810 LysE type translocator FR848_15135 PF06779 Uncharacterised MFS-type transporter YbfB FR848_15140 PF03466 LysR substrate binding domain FR848_15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_15145 PF03060 Nitronate monooxygenase FR848_15150 PF00528 Binding-protein-dependent transport system inner membrane component FR848_15155 PF09383 NIL domain FR848_15155 PF00005 ABC transporter FR848_15160 PF03180 NLPA lipoprotein FR848_15170 PF09905 DNA-binding protein VF530 FR848_15175 PF07338 Protein of unknown function (DUF1471) FR848_15180 PF00005 ABC transporter FR848_15185 PF00528 Binding-protein-dependent transport system inner membrane component FR848_15190 PF00528 Binding-protein-dependent transport system inner membrane component FR848_15210 PF14748 Pyrroline-5-carboxylate reductase dimerisation FR848_15210 PF03807 NADP oxidoreductase coenzyme F420-dependent FR848_15215 PF12833 Helix-turn-helix domain FR848_15220 PF07690 Major Facilitator Superfamily FR848_15225 PF02789 Cytosol aminopeptidase family, N-terminal domain FR848_15225 PF00883 Cytosol aminopeptidase family, catalytic domain FR848_15230 PF01112 Asparaginase FR848_15235 PF02378 Phosphotransferase system, EIIC FR848_15250 PF00005 ABC transporter FR848_15255 PF01497 Periplasmic binding protein FR848_15260 PF01032 FecCD transport family FR848_15275 PF00267 Gram-negative porin FR848_15280 PF03611 PTS system sugar-specific permease component FR848_15285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_15285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_15295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_15295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_15305 PF01791 DeoC/LacD family aldolase FR848_15310 PF00294 pfkB family carbohydrate kinase FR848_15320 PF02653 Branched-chain amino acid transport system / permease component FR848_15325 PF00005 ABC transporter FR848_15330 PF13407 Periplasmic binding protein domain FR848_15335 PF00356 Bacterial regulatory proteins, lacI family FR848_15345 PF01965 DJ-1/PfpI family FR848_15360 PF01738 Dienelactone hydrolase family FR848_15365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_15365 PF03466 LysR substrate binding domain FR848_15385 PF00561 alpha/beta hydrolase fold FR848_15390 PF04325 Protein of unknown function (DUF465) FR848_15395 PF08546 Ketopantoate reductase PanE/ApbA C terminal FR848_15395 PF02558 Ketopantoate reductase PanE/ApbA FR848_15425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_15430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_15435 PF03611 PTS system sugar-specific permease component FR848_15440 PF13580 SIS domain FR848_15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_15460 PF03466 LysR substrate binding domain FR848_15465 PF13847 Methyltransferase domain FR848_15465 PF03551 Transcriptional regulator PadR-like family FR848_15475 PF01638 HxlR-like helix-turn-helix FR848_15485 PF00557 Metallopeptidase family M24 FR848_15490 PF01266 FAD dependent oxidoreductase FR848_15495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR848_15495 PF01568 Molydopterin dinucleotide binding domain FR848_15495 PF00384 Molybdopterin oxidoreductase FR848_15500 PF03916 Polysulphide reductase, NrfD FR848_15505 PF13247 4Fe-4S dicluster domain FR848_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_15510 PF00512 His Kinase A (phospho-acceptor) domain FR848_15515 PF00196 Bacterial regulatory proteins, luxR family FR848_15515 PF00072 Response regulator receiver domain FR848_15525 PF00593 TonB dependent receptor FR848_15525 PF07715 TonB-dependent Receptor Plug Domain FR848_15535 PF07687 Peptidase dimerisation domain FR848_15535 PF01546 Peptidase family M20/M25/M40 FR848_15545 PF02126 Phosphotriesterase family FR848_15550 PF02653 Branched-chain amino acid transport system / permease component FR848_15555 PF00005 ABC transporter FR848_15560 PF00356 Bacterial regulatory proteins, lacI family FR848_15570 PF00294 pfkB family carbohydrate kinase FR848_15590 PF04972 BON domain FR848_15590 PF01476 LysM domain FR848_15595 PF07715 TonB-dependent Receptor Plug Domain FR848_15595 PF00593 TonB dependent receptor FR848_15600 PF13193 AMP-binding enzyme C-terminal domain FR848_15600 PF00501 AMP-binding enzyme FR848_15605 PF00975 Thioesterase domain FR848_15615 PF00698 Acyl transferase domain FR848_15615 PF00668 Condensation domain FR848_15615 PF00109 Beta-ketoacyl synthase, N-terminal domain FR848_15615 PF02801 Beta-ketoacyl synthase, C-terminal domain FR848_15615 PF00550 Phosphopantetheine attachment site FR848_15615 PF16197 Ketoacyl-synthetase C-terminal extension FR848_15620 PF00550 Phosphopantetheine attachment site FR848_15620 PF08242 Methyltransferase domain FR848_15620 PF00668 Condensation domain FR848_15620 PF00501 AMP-binding enzyme FR848_15630 PF04954 Siderophore-interacting protein FR848_15630 PF00005 ABC transporter FR848_15630 PF00664 ABC transporter transmembrane region FR848_15630 PF08021 Siderophore-interacting FAD-binding domain FR848_15635 PF00005 ABC transporter FR848_15635 PF00664 ABC transporter transmembrane region FR848_15640 PF07690 Major Facilitator Superfamily FR848_15645 PF00425 chorismate binding enzyme FR848_15650 PF07690 Major Facilitator Superfamily FR848_15660 PF00512 His Kinase A (phospho-acceptor) domain FR848_15660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_15660 PF00672 HAMP domain FR848_15665 PF02954 Bacterial regulatory protein, Fis family FR848_15665 PF00072 Response regulator receiver domain FR848_15665 PF14532 Sigma-54 interaction domain FR848_15675 PF03313 Serine dehydratase alpha chain FR848_15675 PF03315 Serine dehydratase beta chain FR848_15690 PF01636 Phosphotransferase enzyme family FR848_15715 PF13276 HTH-like domain FR848_15715 PF13333 Integrase core domain FR848_15715 PF01527 Transposase FR848_15715 PF00665 Integrase core domain FR848_15735 PF01425 Amidase FR848_15740 PF02979 Nitrile hydratase, alpha chain FR848_15745 PF02211 Nitrile hydratase beta subunit FR848_15770 PF00069 Protein kinase domain FR848_15770 PF13191 AAA ATPase domain FR848_15775 PF00676 Dehydrogenase E1 component FR848_15780 PF02779 Transketolase, pyrimidine binding domain FR848_15780 PF02780 Transketolase, C-terminal domain FR848_15785 PF00364 Biotin-requiring enzyme FR848_15785 PF02817 e3 binding domain FR848_15785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FR848_15790 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_15790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR848_15795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR848_15795 PF00128 Alpha amylase, catalytic domain FR848_15800 PF00128 Alpha amylase, catalytic domain FR848_15805 PF00128 Alpha amylase, catalytic domain FR848_15805 PF11941 Domain of unknown function (DUF3459) FR848_15805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR848_15825 PF01679 Proteolipid membrane potential modulator FR848_15835 PF02508 Rnf-Nqr subunit, membrane protein FR848_15840 PF00196 Bacterial regulatory proteins, luxR family FR848_15840 PF00563 EAL domain FR848_15875 PF00356 Bacterial regulatory proteins, lacI family FR848_15880 PF01261 Xylose isomerase-like TIM barrel FR848_15885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_15885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_15890 PF03070 TENA/THI-4/PQQC family FR848_15895 PF00005 ABC transporter FR848_15900 PF00528 Binding-protein-dependent transport system inner membrane component FR848_15905 PF09084 NMT1/THI5 like FR848_15910 PF00202 Aminotransferase class-III FR848_15915 PF00282 Pyridoxal-dependent decarboxylase conserved domain FR848_15930 PF00117 Glutamine amidotransferase class-I FR848_15930 PF00958 GMP synthase C terminal domain FR848_15930 PF02540 NAD synthase FR848_15935 PF03717 Penicillin-binding Protein dimerisation domain FR848_15935 PF00905 Penicillin binding protein transpeptidase domain FR848_15940 PF01425 Amidase FR848_15945 PF02785 Biotin carboxylase C-terminal domain FR848_15945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FR848_15945 PF00289 Biotin carboxylase, N-terminal domain FR848_15960 PF00005 ABC transporter FR848_15985 PF01810 LysE type translocator FR848_16005 PF00141 Peroxidase FR848_16015 PF00689 Cation transporting ATPase, C-terminus FR848_16015 PF00690 Cation transporter/ATPase, N-terminus FR848_16020 PF02308 MgtC family FR848_16030 PF00083 Sugar (and other) transporter FR848_16040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_16040 PF03466 LysR substrate binding domain FR848_16045 PF03466 LysR substrate binding domain FR848_16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_16050 PF12833 Helix-turn-helix domain FR848_16055 PF01810 LysE type translocator FR848_16060 PF00384 Molybdopterin oxidoreductase FR848_16065 PF01062 Bestrophin, RFP-TM, chloride channel FR848_16080 PF02566 OsmC-like protein FR848_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_16090 PF03466 LysR substrate binding domain FR848_16100 PF08136 30S ribosomal protein subunit S22 family FR848_16105 PF00390 Malic enzyme, N-terminal domain FR848_16105 PF03949 Malic enzyme, NAD binding domain FR848_16110 PF00005 ABC transporter FR848_16110 PF12848 ABC transporter FR848_16130 PF00719 Inorganic pyrophosphatase FR848_16135 PF00107 Zinc-binding dehydrogenase FR848_16135 PF08240 Alcohol dehydrogenase GroES-like domain FR848_16145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_16150 PF00528 Binding-protein-dependent transport system inner membrane component FR848_16160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_16160 PF00005 ABC transporter FR848_16165 PF00296 Luciferase-like monooxygenase FR848_16175 PF07690 Major Facilitator Superfamily FR848_16190 PF01292 Prokaryotic cytochrome b561 FR848_16195 PF13247 4Fe-4S dicluster domain FR848_16195 PF12800 4Fe-4S binding domain FR848_16195 PF09163 Formate dehydrogenase N, transmembrane FR848_16205 PF00892 EamA-like transporter family FR848_16210 PF07690 Major Facilitator Superfamily FR848_16220 PF07690 Major Facilitator Superfamily FR848_16225 PF14710 Respiratory nitrate reductase alpha N-terminal FR848_16225 PF01568 Molydopterin dinucleotide binding domain FR848_16225 PF00384 Molybdopterin oxidoreductase FR848_16230 PF13247 4Fe-4S dicluster domain FR848_16230 PF14711 Respiratory nitrate reductase beta C-terminal FR848_16235 PF02613 Nitrate reductase delta subunit FR848_16240 PF02665 Nitrate reductase gamma subunit FR848_16245 PF00797 N-acetyltransferase FR848_16250 PF00528 Binding-protein-dependent transport system inner membrane component FR848_16260 PF00005 ABC transporter FR848_16260 PF08402 TOBE domain FR848_16265 PF01613 Flavin reductase like domain FR848_16270 PF02311 AraC-like ligand binding domain FR848_16270 PF12833 Helix-turn-helix domain FR848_16285 PF02264 LamB porin FR848_16285 PF11471 Maltoporin periplasmic N-terminal extension FR848_16300 PF01361 Tautomerase enzyme FR848_16305 PF13417 Glutathione S-transferase, N-terminal domain FR848_16310 PF00356 Bacterial regulatory proteins, lacI family FR848_16315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_16315 PF13378 Enolase C-terminal domain-like FR848_16320 PF07690 Major Facilitator Superfamily FR848_16330 PF00005 ABC transporter FR848_16335 PF00528 Binding-protein-dependent transport system inner membrane component FR848_16350 PF00296 Luciferase-like monooxygenase FR848_16360 PF00296 Luciferase-like monooxygenase FR848_16370 PF02224 Cytidylate kinase FR848_16375 PF00324 Amino acid permease FR848_16380 PF06004 Bacterial protein of unknown function (DUF903) FR848_16390 PF00593 TonB dependent receptor FR848_16390 PF07715 TonB-dependent Receptor Plug Domain FR848_16395 PF04175 Protein of unknown function (DUF406) FR848_16405 PF01156 Inosine-uridine preferring nucleoside hydrolase FR848_16410 PF00107 Zinc-binding dehydrogenase FR848_16410 PF16884 N-terminal domain of oxidoreductase FR848_16415 PF08671 Anti-repressor SinI FR848_16415 PF01381 Helix-turn-helix FR848_16425 PF00583 Acetyltransferase (GNAT) family FR848_16430 PF04657 Putative inner membrane exporter, YdcZ FR848_16435 PF10735 Protein of unknown function (DUF2526) FR848_16440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_16445 PF00171 Aldehyde dehydrogenase family FR848_16450 PF01095 Pectinesterase FR848_16455 PF00561 alpha/beta hydrolase fold FR848_16460 PF10753 Toxin GhoT_OrtT FR848_16480 PF00171 Aldehyde dehydrogenase family FR848_16485 PF00528 Binding-protein-dependent transport system inner membrane component FR848_16490 PF00528 Binding-protein-dependent transport system inner membrane component FR848_16495 PF00005 ABC transporter FR848_16495 PF08402 TOBE domain FR848_16500 PF13416 Bacterial extracellular solute-binding protein FR848_16510 PF00155 Aminotransferase class I and II FR848_16510 PF00392 Bacterial regulatory proteins, gntR family FR848_16515 PF01654 Cytochrome bd terminal oxidase subunit I FR848_16520 PF02322 Cytochrome bd terminal oxidase subunit II FR848_16535 PF12392 Collagenase FR848_16535 PF01136 Peptidase family U32 FR848_16540 PF07883 Cupin domain FR848_16540 PF01381 Helix-turn-helix FR848_16545 PF03594 Benzoate membrane transport protein FR848_16550 PF12833 Helix-turn-helix domain FR848_16555 PF00892 EamA-like transporter family FR848_16560 PF11769 Protein of unknown function (DUF3313) FR848_16565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_16570 PF01546 Peptidase family M20/M25/M40 FR848_16570 PF07687 Peptidase dimerisation domain FR848_16575 PF03848 Tellurite resistance protein TehB FR848_16580 PF03595 Voltage-dependent anion channel FR848_16585 PF18836 Beta solenoid repeat from YDCK FR848_16590 PF13302 Acetyltransferase (GNAT) domain FR848_16595 PF04349 Periplasmic glucan biosynthesis protein, MdoG FR848_16600 PF00135 Carboxylesterase family FR848_16605 PF07063 Domain of unknown function (DUF1338) FR848_16610 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FR848_16610 PF00775 Dioxygenase FR848_16615 PF00775 Dioxygenase FR848_16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_16620 PF03466 LysR substrate binding domain FR848_16625 PF01011 PQQ enzyme repeat FR848_16635 PF08240 Alcohol dehydrogenase GroES-like domain FR848_16635 PF00107 Zinc-binding dehydrogenase FR848_16640 PF02583 Metal-sensitive transcriptional repressor FR848_16650 PF01292 Prokaryotic cytochrome b561 FR848_16655 PF06183 DinI-like family FR848_16665 PF14001 YdfZ protein FR848_16670 PF05230 MASE2 domain FR848_16670 PF00990 Diguanylate cyclase, GGDEF domain FR848_16675 PF03466 LysR substrate binding domain FR848_16675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_16680 PF00583 Acetyltransferase (GNAT) family FR848_16685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR848_16685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR848_16690 PF00171 Aldehyde dehydrogenase family FR848_16695 PF02698 DUF218 domain FR848_16705 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FR848_16705 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FR848_16720 PF13533 Biotin-lipoyl like FR848_16725 PF02321 Outer membrane efflux protein FR848_16730 PF01596 O-methyltransferase FR848_16735 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FR848_16735 PF00271 Helicase conserved C-terminal domain FR848_16735 PF04408 Helicase associated domain (HA2) FR848_16735 PF11898 Domain of unknown function (DUF3418) FR848_16735 PF00270 DEAD/DEAH box helicase FR848_16740 PF02525 Flavodoxin-like fold FR848_16750 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_16755 PF08223 PaaX-like protein C-terminal domain FR848_16755 PF07848 PaaX-like protein FR848_16760 PF00501 AMP-binding enzyme FR848_16760 PF14535 AMP-binding enzyme C-terminal domain FR848_16765 PF00108 Thiolase, N-terminal domain FR848_16765 PF02803 Thiolase, C-terminal domain FR848_16770 PF03061 Thioesterase superfamily FR848_16775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FR848_16775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FR848_16775 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FR848_16780 PF00378 Enoyl-CoA hydratase/isomerase FR848_16785 PF00378 Enoyl-CoA hydratase/isomerase FR848_16790 PF00175 Oxidoreductase NAD-binding domain FR848_16790 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_16790 PF00970 Oxidoreductase FAD-binding domain FR848_16795 PF01883 Iron-sulfur cluster assembly protein FR848_16800 PF05138 Phenylacetic acid catabolic protein FR848_16805 PF06243 Phenylacetic acid degradation B FR848_16810 PF05138 Phenylacetic acid catabolic protein FR848_16815 PF00171 Aldehyde dehydrogenase family FR848_16815 PF01575 MaoC like domain FR848_16820 PF02728 Copper amine oxidase, N3 domain FR848_16820 PF01179 Copper amine oxidase, enzyme domain FR848_16820 PF07833 Copper amine oxidase N-terminal domain FR848_16820 PF02727 Copper amine oxidase, N2 domain FR848_16835 PF06906 Protein of unknown function (DUF1272) FR848_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_16850 PF03466 LysR substrate binding domain FR848_16860 PF12833 Helix-turn-helix domain FR848_16860 PF01965 DJ-1/PfpI family FR848_16865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR848_16865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR848_16875 PF00797 N-acetyltransferase FR848_16880 PF00392 Bacterial regulatory proteins, gntR family FR848_16880 PF00155 Aminotransferase class I and II FR848_16905 PF08279 HTH domain FR848_16905 PF13280 WYL domain FR848_16910 PF00300 Histidine phosphatase superfamily (branch 1) FR848_16920 PF00873 AcrB/AcrD/AcrF family FR848_16925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_16925 PF00529 HlyD membrane-fusion protein of T1SS FR848_16930 PF06445 GyrI-like small molecule binding domain FR848_16930 PF12833 Helix-turn-helix domain FR848_16935 PF02311 AraC-like ligand binding domain FR848_16935 PF12833 Helix-turn-helix domain FR848_16940 PF04632 Fusaric acid resistance protein family FR848_16950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_16950 PF00529 HlyD membrane-fusion protein of T1SS FR848_16970 PF02774 Semialdehyde dehydrogenase, dimerisation domain FR848_16970 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR848_16975 PF01872 RibD C-terminal domain FR848_16990 PF07687 Peptidase dimerisation domain FR848_16990 PF01546 Peptidase family M20/M25/M40 FR848_17000 PF01042 Endoribonuclease L-PSP FR848_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_17010 PF03466 LysR substrate binding domain FR848_17015 PF00005 ABC transporter FR848_17020 PF05721 Phytanoyl-CoA dioxygenase (PhyH) FR848_17030 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_17035 PF00171 Aldehyde dehydrogenase family FR848_17040 PF12833 Helix-turn-helix domain FR848_17040 PF14525 AraC-binding-like domain FR848_17045 PF07027 Protein of unknown function (DUF1318) FR848_17050 PF13617 YnbE-like lipoprotein FR848_17055 PF11739 Dicarboxylate transport FR848_17060 PF09335 SNARE associated Golgi protein FR848_17065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_17065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_17070 PF03724 META domain FR848_17075 PF03891 Domain of unknown function (DUF333) FR848_17155 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FR848_17155 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FR848_17155 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FR848_17155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_17155 PF10371 Domain of unknown function FR848_17165 PF00267 Gram-negative porin FR848_17175 PF00582 Universal stress protein family FR848_17180 PF06291 Bor protein FR848_17185 PF01278 Omptin family FR848_17195 PF01171 PP-loop family FR848_17200 PF03880 DbpA RNA binding domain FR848_17200 PF00271 Helicase conserved C-terminal domain FR848_17200 PF00270 DEAD/DEAH box helicase FR848_17205 PF01544 CorA-like Mg2+ transporter protein FR848_17215 PF00455 DeoR C terminal sensor domain FR848_17215 PF08220 DeoR-like helix-turn-helix domain FR848_17220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_17220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_17225 PF11799 impB/mucB/samB family C-terminal domain FR848_17225 PF00817 impB/mucB/samB family FR848_17225 PF11798 IMS family HHH motif FR848_17225 PF13438 Domain of unknown function (DUF4113) FR848_17230 PF00717 Peptidase S24-like FR848_17250 PF07274 Protein of unknown function (DUF1440) FR848_17255 PF01389 OmpA-like transmembrane domain FR848_17255 PF00691 OmpA family FR848_17260 PF15977 Winged helix-turn-helix DNA binding FR848_17275 PF00106 short chain dehydrogenase FR848_17280 PF03060 Nitronate monooxygenase FR848_17285 PF03466 LysR substrate binding domain FR848_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_17290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_17290 PF03466 LysR substrate binding domain FR848_17295 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FR848_17300 PF07690 Major Facilitator Superfamily FR848_17310 PF13411 MerR HTH family regulatory protein FR848_17320 PF00106 short chain dehydrogenase FR848_17345 PF08349 Protein of unknown function (DUF1722) FR848_17350 PF02264 LamB porin FR848_17360 PF04616 Glycosyl hydrolases family 43 FR848_17360 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FR848_17415 PF00004 ATPase family associated with various cellular activities (AAA) FR848_17415 PF17871 AAA lid domain FR848_17415 PF10431 C-terminal, D2-small domain, of ClpB protein FR848_17415 PF07724 AAA domain (Cdc48 subfamily) FR848_17425 PF05736 OprF membrane domain FR848_17425 PF00691 OmpA family FR848_17455 PF01965 DJ-1/PfpI family FR848_17460 PF00005 ABC transporter FR848_17465 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17480 PF00291 Pyridoxal-phosphate dependent enzyme FR848_17485 PF02615 Malate/L-lactate dehydrogenase FR848_17495 PF00005 ABC transporter FR848_17500 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17505 PF00266 Aminotransferase class-V FR848_17515 PF00581 Rhodanese-like domain FR848_17515 PF00899 ThiF family FR848_17530 PF00291 Pyridoxal-phosphate dependent enzyme FR848_17535 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_17545 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17550 PF00005 ABC transporter FR848_17555 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_17560 PF01817 Chorismate mutase type II FR848_17565 PF00005 ABC transporter FR848_17570 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17575 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17580 PF00106 short chain dehydrogenase FR848_17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_17590 PF03466 LysR substrate binding domain FR848_17600 PF03746 LamB/YcsF family FR848_17605 PF02626 Carboxyltransferase domain, subdomain A and B FR848_17610 PF02682 Carboxyltransferase domain, subdomain C and D FR848_17615 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_17620 PF00892 EamA-like transporter family FR848_17625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FR848_17625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FR848_17630 PF00289 Biotin carboxylase, N-terminal domain FR848_17630 PF02785 Biotin carboxylase C-terminal domain FR848_17630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FR848_17635 PF00364 Biotin-requiring enzyme FR848_17645 PF00005 ABC transporter FR848_17655 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17670 PF00083 Sugar (and other) transporter FR848_17675 PF03180 NLPA lipoprotein FR848_17680 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17685 PF00005 ABC transporter FR848_17690 PF00296 Luciferase-like monooxygenase FR848_17695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_17700 PF00246 Zinc carboxypeptidase FR848_17705 PF13378 Enolase C-terminal domain-like FR848_17705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_17710 PF08534 Redoxin FR848_17715 PF05145 Transition state regulatory protein AbrB FR848_17720 PF18024 Helix-turn-helix domain FR848_17720 PF00158 Sigma-54 interaction domain FR848_17725 PF05128 Domain of unknown function (DUF697) FR848_17730 PF04317 YcjX-like family, DUF463 FR848_17735 PF00581 Rhodanese-like domain FR848_17740 PF09584 Phage shock protein PspD (Phageshock_PspD) FR848_17745 PF04024 PspC domain FR848_17750 PF06667 Phage shock protein B FR848_17755 PF04012 PspA/IM30 family FR848_17760 PF00158 Sigma-54 interaction domain FR848_17760 PF02954 Bacterial regulatory protein, Fis family FR848_17765 PF07690 Major Facilitator Superfamily FR848_17770 PF07687 Peptidase dimerisation domain FR848_17770 PF01546 Peptidase family M20/M25/M40 FR848_17775 PF12833 Helix-turn-helix domain FR848_17785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_17790 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17795 PF12911 N-terminal TM domain of oligopeptide transport permease C FR848_17795 PF00528 Binding-protein-dependent transport system inner membrane component FR848_17800 PF00005 ABC transporter FR848_17800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_17805 PF00005 ABC transporter FR848_17820 PF00575 S1 RNA binding domain FR848_17820 PF17876 Cold shock domain FR848_17820 PF08206 Ribonuclease B OB domain FR848_17820 PF00773 RNB domain FR848_17830 PF00455 DeoR C terminal sensor domain FR848_17830 PF08220 DeoR-like helix-turn-helix domain FR848_17835 PF05433 Glycine zipper 2TM domain FR848_17840 PF01253 Translation initiation factor SUI1 FR848_17845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FR848_17850 PF18073 Rubredoxin metal binding domain FR848_17855 PF06305 Lipopolysaccharide assembly protein A domain FR848_17860 PF01569 PAP2 superfamily FR848_17865 PF00925 GTP cyclohydrolase II FR848_17870 PF00330 Aconitase family (aconitate hydratase) FR848_17870 PF00694 Aconitase C-terminal domain FR848_17880 PF03466 LysR substrate binding domain FR848_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_17885 PF01751 Toprim domain FR848_17885 PF01396 Topoisomerase DNA binding C4 zinc finger FR848_17885 PF01131 DNA topoisomerase FR848_17885 PF08272 Topoisomerase I zinc-ribbon-like FR848_17890 PF10692 Protein of unknown function (DUF2498) FR848_17895 PF08496 Peptidase family S49 N-terminal FR848_17895 PF01343 Peptidase family S49 FR848_17905 PF00106 short chain dehydrogenase FR848_17910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FR848_17915 PF12833 Helix-turn-helix domain FR848_17930 PF00849 RNA pseudouridylate synthase FR848_17930 PF01479 S4 domain FR848_17935 PF01300 Telomere recombination FR848_17940 PF02811 PHP domain FR848_17945 PF04715 Anthranilate synthase component I, N terminal region FR848_17945 PF00425 chorismate binding enzyme FR848_17950 PF00117 Glutamine amidotransferase class-I FR848_17950 PF00591 Glycosyl transferase family, a/b domain FR848_17950 PF02885 Glycosyl transferase family, helical bundle domain FR848_17955 PF00218 Indole-3-glycerol phosphate synthase FR848_17955 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FR848_17960 PF00291 Pyridoxal-phosphate dependent enzyme FR848_17965 PF00290 Tryptophan synthase alpha chain FR848_17975 PF08240 Alcohol dehydrogenase GroES-like domain FR848_17975 PF00107 Zinc-binding dehydrogenase FR848_17980 PF03466 LysR substrate binding domain FR848_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_17985 PF00300 Histidine phosphatase superfamily (branch 1) FR848_17985 PF00106 short chain dehydrogenase FR848_17990 PF12833 Helix-turn-helix domain FR848_18000 PF10820 Protein of unknown function (DUF2543) FR848_18005 PF03922 OmpW family FR848_18015 PF04279 Intracellular septation protein A FR848_18020 PF00654 Voltage gated chloride channel FR848_18025 PF00593 TonB dependent receptor FR848_18025 PF07715 TonB-dependent Receptor Plug Domain FR848_18030 PF03061 Thioesterase superfamily FR848_18035 PF14002 YniB-like protein FR848_18040 PF13419 Haloacid dehalogenase-like hydrolase FR848_18050 PF04307 LexA-binding, inner membrane-associated putative hydrolase FR848_18060 PF10729 Cell division activator CedA FR848_18065 PF06628 Catalase-related immune-responsive FR848_18065 PF18011 C-terminal domain found in long catalases FR848_18065 PF00199 Catalase FR848_18070 PF04794 YdjC-like protein FR848_18075 PF11975 Family 4 glycosyl hydrolase C-terminal domain FR848_18075 PF02056 Family 4 glycosyl hydrolase FR848_18080 PF12833 Helix-turn-helix domain FR848_18080 PF07883 Cupin domain FR848_18085 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FR848_18090 PF02378 Phosphotransferase system, EIIC FR848_18095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_18100 PF04355 SmpA / OmlA family FR848_18105 PF02540 NAD synthase FR848_18115 PF09972 Predicted membrane protein (DUF2207) FR848_18120 PF04011 LemA family FR848_18125 PF07813 LTXXQ motif family protein FR848_18130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FR848_18135 PF04996 Succinylarginine dihydrolase FR848_18140 PF00171 Aldehyde dehydrogenase family FR848_18145 PF04958 Arginine N-succinyltransferase beta subunit FR848_18150 PF00202 Aminotransferase class-III FR848_18155 PF03372 Endonuclease/Exonuclease/phosphatase family FR848_18160 PF09335 SNARE associated Golgi protein FR848_18165 PF09335 SNARE associated Golgi protein FR848_18170 PF02627 Carboxymuconolactone decarboxylase family FR848_18175 PF13416 Bacterial extracellular solute-binding protein FR848_18180 PF00528 Binding-protein-dependent transport system inner membrane component FR848_18185 PF00005 ABC transporter FR848_18190 PF00581 Rhodanese-like domain FR848_18195 PF01066 CDP-alcohol phosphatidyltransferase FR848_18200 PF00293 NUDIX domain FR848_18205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FR848_18205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FR848_18210 PF01751 Toprim domain FR848_18210 PF01131 DNA topoisomerase FR848_18215 PF02769 AIR synthase related protein, C-terminal domain FR848_18215 PF00586 AIR synthase related protein, N-terminal domain FR848_18225 PF01569 PAP2 superfamily FR848_18230 PF00881 Nitroreductase family FR848_18235 PF01343 Peptidase family S49 FR848_18240 PF00710 Asparaginase, N-terminal FR848_18240 PF17763 Glutaminase/Asparaginase C-terminal domain FR848_18245 PF00857 Isochorismatase family FR848_18250 PF00083 Sugar (and other) transporter FR848_18255 PF08220 DeoR-like helix-turn-helix domain FR848_18255 PF00455 DeoR C terminal sensor domain FR848_18260 PF00248 Aldo/keto reductase family FR848_18265 PF00294 pfkB family carbohydrate kinase FR848_18270 PF01116 Fructose-bisphosphate aldolase class-II FR848_18275 PF00107 Zinc-binding dehydrogenase FR848_18275 PF08240 Alcohol dehydrogenase GroES-like domain FR848_18280 PF00083 Sugar (and other) transporter FR848_18285 PF00107 Zinc-binding dehydrogenase FR848_18285 PF08240 Alcohol dehydrogenase GroES-like domain FR848_18290 PF00041 Fibronectin type III domain FR848_18290 PF00704 Glycosyl hydrolases family 18 FR848_18295 PF01844 HNH endonuclease FR848_18300 PF07023 Protein of unknown function (DUF1315) FR848_18305 PF01641 SelR domain FR848_18310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR848_18310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR848_18315 PF01263 Aldose 1-epimerase FR848_18320 PF00248 Aldo/keto reductase family FR848_18325 PF06629 MltA-interacting protein MipA FR848_18330 PF08298 PrkA AAA domain FR848_18330 PF06798 PrkA serine protein kinase C-terminal domain FR848_18335 PF04285 Protein of unknown function (DUF444) FR848_18340 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FR848_18350 PF00990 Diguanylate cyclase, GGDEF domain FR848_18350 PF17155 Gammaproteobacterial periplasmic sensor domain FR848_18355 PF04073 Aminoacyl-tRNA editing domain FR848_18360 PF04284 Protein of unknown function (DUF441) FR848_18365 PF12833 Helix-turn-helix domain FR848_18365 PF02311 AraC-like ligand binding domain FR848_18370 PF07690 Major Facilitator Superfamily FR848_18375 PF00117 Glutamine amidotransferase class-I FR848_18375 PF06418 CTP synthase N-terminus FR848_18380 PF04463 Protein of unknown function (DUF523) FR848_18385 PF04343 Protein of unknown function, DUF488 FR848_18390 PF03891 Domain of unknown function (DUF333) FR848_18395 PF13185 GAF domain FR848_18395 PF00990 Diguanylate cyclase, GGDEF domain FR848_18415 PF10749 Protein of unknown function (DUF2534) FR848_18420 PF01810 LysE type translocator FR848_18425 PF03279 Bacterial lipid A biosynthesis acyltransferase FR848_18430 PF13649 Methyltransferase domain FR848_18435 PF04542 Sigma-70 region 2 FR848_18435 PF08281 Sigma-70, region 4 FR848_18440 PF16220 Domain of unknown function (DUF4880) FR848_18440 PF04773 FecR protein FR848_18445 PF07660 Secretin and TonB N terminus short domain FR848_18445 PF07715 TonB-dependent Receptor Plug Domain FR848_18445 PF00593 TonB dependent receptor FR848_18450 PF01497 Periplasmic binding protein FR848_18455 PF01032 FecCD transport family FR848_18460 PF01032 FecCD transport family FR848_18465 PF00005 ABC transporter FR848_18470 PF00710 Asparaginase, N-terminal FR848_18470 PF17763 Glutaminase/Asparaginase C-terminal domain FR848_18475 PF01966 HD domain FR848_18480 PF00990 Diguanylate cyclase, GGDEF domain FR848_18485 PF01797 Transposase IS200 like FR848_18490 PF00180 Isocitrate/isopropylmalate dehydrogenase FR848_18495 PF00849 RNA pseudouridylate synthase FR848_18500 PF00293 NUDIX domain FR848_18510 PF04356 Protein of unknown function (DUF489) FR848_18515 PF08328 Adenylosuccinate lyase C-terminal FR848_18515 PF00206 Lyase FR848_18520 PF07690 Major Facilitator Superfamily FR848_18525 PF01638 HxlR-like helix-turn-helix FR848_18530 PF00486 Transcriptional regulatory protein, C terminal FR848_18530 PF00072 Response regulator receiver domain FR848_18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_18535 PF08918 PhoQ Sensor FR848_18540 PF08007 Cupin superfamily protein FR848_18545 PF07687 Peptidase dimerisation domain FR848_18545 PF01546 Peptidase family M20/M25/M40 FR848_18550 PF00005 ABC transporter FR848_18550 PF08402 TOBE domain FR848_18555 PF00528 Binding-protein-dependent transport system inner membrane component FR848_18560 PF00528 Binding-protein-dependent transport system inner membrane component FR848_18565 PF13416 Bacterial extracellular solute-binding protein FR848_18575 PF02779 Transketolase, pyrimidine binding domain FR848_18575 PF02780 Transketolase, C-terminal domain FR848_18575 PF00456 Transketolase, thiamine diphosphate binding domain FR848_18580 PF00923 Transaldolase/Fructose-6-phosphate aldolase FR848_18585 PF02502 Ribose/Galactose Isomerase FR848_18595 PF03812 2-keto-3-deoxygluconate permease FR848_18600 PF07005 Sugar-binding N-terminal domain FR848_18600 PF17042 Nucleotide-binding C-terminal domain FR848_18605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FR848_18610 PF00121 Triosephosphate isomerase FR848_18615 PF04198 Putative sugar-binding domain FR848_18620 PF02146 Sir2 family FR848_18625 PF00480 ROK family FR848_18630 PF02687 FtsX-like permease family FR848_18630 PF12704 MacB-like periplasmic core domain FR848_18635 PF00005 ABC transporter FR848_18640 PF12704 MacB-like periplasmic core domain FR848_18640 PF02687 FtsX-like permease family FR848_18645 PF02559 CarD-like/TRCF domain FR848_18645 PF00270 DEAD/DEAH box helicase FR848_18645 PF03461 TRCF domain FR848_18645 PF17757 UvrB interaction domain FR848_18645 PF00271 Helicase conserved C-terminal domain FR848_18650 PF17969 L,D-transpeptidase C-terminal domain FR848_18650 PF01476 LysM domain FR848_18650 PF03734 L,D-transpeptidase catalytic domain FR848_18655 PF07338 Protein of unknown function (DUF1471) FR848_18660 PF00440 Bacterial regulatory proteins, tetR family FR848_18665 PF07715 TonB-dependent Receptor Plug Domain FR848_18665 PF00593 TonB dependent receptor FR848_18670 PF05433 Glycine zipper 2TM domain FR848_18675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_18680 PF05728 Uncharacterised protein family (UPF0227) FR848_18685 PF00933 Glycosyl hydrolase family 3 N terminal domain FR848_18690 PF01636 Phosphotransferase enzyme family FR848_18695 PF13036 Peptidoglycan-synthase activator LpoB FR848_18700 PF07233 Protein of unknown function (DUF1425) FR848_18705 PF01230 HIT domain FR848_18715 PF07715 TonB-dependent Receptor Plug Domain FR848_18715 PF00593 TonB dependent receptor FR848_18720 PF02378 Phosphotransferase system, EIIC FR848_18720 PF00367 phosphotransferase system, EIIB FR848_18725 PF01026 TatD related DNase FR848_18730 PF09115 DNA polymerase III, delta subunit, C terminal FR848_18735 PF02223 Thymidylate kinase FR848_18740 PF02618 YceG-like family FR848_18745 PF01063 Amino-transferase class IV FR848_18750 PF00109 Beta-ketoacyl synthase, N-terminal domain FR848_18750 PF02801 Beta-ketoacyl synthase, C-terminal domain FR848_18755 PF00550 Phosphopantetheine attachment site FR848_18765 PF00698 Acyl transferase domain FR848_18770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FR848_18770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FR848_18775 PF02504 Fatty acid synthesis protein FR848_18780 PF01783 Ribosomal L32p protein family FR848_18785 PF02620 Large ribosomal RNA subunit accumulation protein YceD FR848_18790 PF02545 Maf-like protein FR848_18795 PF00326 Prolyl oligopeptidase family FR848_18795 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FR848_18800 PF00849 RNA pseudouridylate synthase FR848_18800 PF01479 S4 domain FR848_18805 PF12111 Polyribonucleotide phosphorylase C terminal FR848_18805 PF10150 Ribonuclease E/G family FR848_18805 PF00575 S1 RNA binding domain FR848_18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_18810 PF03466 LysR substrate binding domain FR848_18815 PF07690 Major Facilitator Superfamily FR848_18820 PF03023 Lipid II flippase MurJ FR848_18825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_18830 PF04337 Protein of unknown function, DUF480 FR848_18835 PF13302 Acetyltransferase (GNAT) domain FR848_18840 PF07690 Major Facilitator Superfamily FR848_18845 PF13417 Glutathione S-transferase, N-terminal domain FR848_18845 PF04399 Glutaredoxin 2, C terminal domain FR848_18850 PF07273 Protein of unknown function (DUF1439) FR848_18855 PF01979 Amidohydrolase family FR848_18860 PF06183 DinI-like family FR848_18865 PF13991 BssS protein family FR848_18870 PF01266 FAD dependent oxidoreductase FR848_18875 PF10968 Protein of unknown function (DUF2770) FR848_18885 PF03279 Bacterial lipid A biosynthesis acyltransferase FR848_18890 PF07690 Major Facilitator Superfamily FR848_18895 PF13984 MsyB protein FR848_18900 PF07119 Protein of unknown function (DUF1375) FR848_18905 PF00535 Glycosyl transferase family 2 FR848_18910 PF04349 Periplasmic glucan biosynthesis protein, MdoG FR848_18915 PF01757 Acyltransferase family FR848_18920 PF00440 Bacterial regulatory proteins, tetR family FR848_18920 PF13977 BetI-type transcriptional repressor, C-terminal FR848_18925 PF01661 Macro domain FR848_18935 PF06496 Protein of unknown function (DUF1097) FR848_18940 PF02613 Nitrate reductase delta subunit FR848_18945 PF02811 PHP domain FR848_18950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_18960 PF03466 LysR substrate binding domain FR848_18965 PF05726 Pirin C-terminal cupin domain FR848_18965 PF02678 Pirin FR848_18970 PF00857 Isochorismatase family FR848_18990 PF00512 His Kinase A (phospho-acceptor) domain FR848_18990 PF00672 HAMP domain FR848_18990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_18995 PF00072 Response regulator receiver domain FR848_18995 PF00486 Transcriptional regulatory protein, C terminal FR848_19010 PF02562 PhoH-like protein FR848_19015 PF04261 Dyp-type peroxidase family FR848_19020 PF13473 Cupredoxin-like domain FR848_19020 PF09375 Imelysin FR848_19025 PF03239 Iron permease FTR1 family FR848_19030 PF07662 Na+ dependent nucleoside transporter C-terminus FR848_19030 PF01773 Na+ dependent nucleoside transporter N-terminus FR848_19030 PF07670 Nucleoside recognition FR848_19040 PF00474 Sodium:solute symporter family FR848_19045 PF00171 Aldehyde dehydrogenase family FR848_19045 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FR848_19045 PF14850 DNA-binding domain of Proline dehydrogenase FR848_19045 PF01619 Proline dehydrogenase FR848_19055 PF08362 YcdC-like protein, C-terminal region FR848_19055 PF00440 Bacterial regulatory proteins, tetR family FR848_19060 PF00296 Luciferase-like monooxygenase FR848_19065 PF00857 Isochorismatase family FR848_19070 PF01042 Endoribonuclease L-PSP FR848_19075 PF00561 alpha/beta hydrolase fold FR848_19080 PF00881 Nitroreductase family FR848_19085 PF01613 Flavin reductase like domain FR848_19090 PF00860 Permease family FR848_19100 PF10685 Stress-induced bacterial acidophilic repeat motif FR848_19105 PF03358 NADPH-dependent FMN reductase FR848_19110 PF13993 YccJ-like protein FR848_19115 PF00328 Histidine phosphatase superfamily (branch 2) FR848_19130 PF00324 Amino acid permease FR848_19140 PF00120 Glutamine synthetase, catalytic domain FR848_19145 PF07722 Peptidase C26 FR848_19150 PF01381 Helix-turn-helix FR848_19150 PF07883 Cupin domain FR848_19155 PF00171 Aldehyde dehydrogenase family FR848_19160 PF01266 FAD dependent oxidoreductase FR848_19165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_19165 PF03466 LysR substrate binding domain FR848_19170 PF00180 Isocitrate/isopropylmalate dehydrogenase FR848_19175 PF02896 PEP-utilising enzyme, TIM barrel domain FR848_19175 PF00381 PTS HPr component phosphorylation site FR848_19175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_19175 PF05524 PEP-utilising enzyme, N-terminal FR848_19175 PF00391 PEP-utilising enzyme, mobile domain FR848_19185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_19195 PF04055 Radical SAM superfamily FR848_19200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_19210 PF12833 Helix-turn-helix domain FR848_19215 PF05230 MASE2 domain FR848_19215 PF00990 Diguanylate cyclase, GGDEF domain FR848_19235 PF02153 Prephenate dehydrogenase FR848_19235 PF01817 Chorismate mutase type II FR848_19245 PF06178 Oligogalacturonate-specific porin protein (KdgM) FR848_19250 PF06917 Periplasmic pectate lyase FR848_19255 PF01546 Peptidase family M20/M25/M40 FR848_19255 PF07687 Peptidase dimerisation domain FR848_19260 PF00266 Aminotransferase class-V FR848_19265 PF00005 ABC transporter FR848_19275 PF00528 Binding-protein-dependent transport system inner membrane component FR848_19300 PF01425 Amidase FR848_19315 PF01177 Asp/Glu/Hydantoin racemase FR848_19325 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FR848_19330 PF01979 Amidohydrolase family FR848_19335 PF00576 HIUase/Transthyretin family FR848_19345 PF00860 Permease family FR848_19350 PF01494 FAD binding domain FR848_19355 PF03466 LysR substrate binding domain FR848_19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_19360 PF00355 Rieske [2Fe-2S] domain FR848_19365 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_19370 PF00005 ABC transporter FR848_19375 PF00528 Binding-protein-dependent transport system inner membrane component FR848_19395 PF03466 LysR substrate binding domain FR848_19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_19415 PF11412 Disulphide bond corrector protein DsbC FR848_19415 PF02683 Cytochrome C biogenesis protein transmembrane region FR848_19425 PF13098 Thioredoxin-like domain FR848_19435 PF00296 Luciferase-like monooxygenase FR848_19440 PF01042 Endoribonuclease L-PSP FR848_19450 PF00672 HAMP domain FR848_19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_19450 PF00512 His Kinase A (phospho-acceptor) domain FR848_19455 PF00486 Transcriptional regulatory protein, C terminal FR848_19455 PF00072 Response regulator receiver domain FR848_19465 PF00873 AcrB/AcrD/AcrF family FR848_19475 PF00313 'Cold-shock' DNA-binding domain FR848_19480 PF00313 'Cold-shock' DNA-binding domain FR848_19485 PF00939 Sodium:sulfate symporter transmembrane region FR848_19490 PF00330 Aconitase family (aconitate hydratase) FR848_19490 PF11791 Aconitate B N-terminal domain FR848_19490 PF06434 Aconitate hydratase 2 N-terminus FR848_19500 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FR848_19510 PF04223 Citrate lyase, alpha subunit (CitF) FR848_19515 PF03328 HpcH/HpaI aldolase/citrate lyase family FR848_19520 PF06857 Malonate decarboxylase delta subunit (MdcD) FR848_19525 PF08218 Citrate lyase ligase C-terminal domain FR848_19530 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_19535 PF07690 Major Facilitator Superfamily FR848_19540 PF04303 PrpF protein FR848_19545 PF03466 LysR substrate binding domain FR848_19545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_19560 PF00528 Binding-protein-dependent transport system inner membrane component FR848_19565 PF00528 Binding-protein-dependent transport system inner membrane component FR848_19575 PF01063 Amino-transferase class IV FR848_19580 PF00440 Bacterial regulatory proteins, tetR family FR848_19595 PF07690 Major Facilitator Superfamily FR848_19600 PF00155 Aminotransferase class I and II FR848_19610 PF00873 AcrB/AcrD/AcrF family FR848_19625 PF00107 Zinc-binding dehydrogenase FR848_19625 PF08240 Alcohol dehydrogenase GroES-like domain FR848_19630 PF00106 short chain dehydrogenase FR848_19640 PF12852 Cupin FR848_19640 PF12833 Helix-turn-helix domain FR848_19645 PF02056 Family 4 glycosyl hydrolase FR848_19645 PF11975 Family 4 glycosyl hydrolase C-terminal domain FR848_19650 PF12833 Helix-turn-helix domain FR848_19655 PF00440 Bacterial regulatory proteins, tetR family FR848_19655 PF02909 Tetracyclin repressor-like, C-terminal domain FR848_19660 PF07690 Major Facilitator Superfamily FR848_19675 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_19685 PF00005 ABC transporter FR848_19690 PF07687 Peptidase dimerisation domain FR848_19690 PF01546 Peptidase family M20/M25/M40 FR848_19695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_19695 PF13378 Enolase C-terminal domain-like FR848_19700 PF01321 Creatinase/Prolidase N-terminal domain FR848_19700 PF00557 Metallopeptidase family M24 FR848_19705 PF00701 Dihydrodipicolinate synthetase family FR848_19710 PF06418 CTP synthase N-terminus FR848_19710 PF00117 Glutamine amidotransferase class-I FR848_19720 PF00392 Bacterial regulatory proteins, gntR family FR848_19720 PF07702 UTRA domain FR848_19730 PF03609 PTS system sorbose-specific iic component FR848_19735 PF03613 PTS system mannose/fructose/sorbose family IID component FR848_19740 PF03830 PTS system sorbose subfamily IIB component FR848_19745 PF13580 SIS domain FR848_19750 PF07470 Glycosyl Hydrolase Family 88 FR848_19755 PF13580 SIS domain FR848_19760 PF03573 outer membrane porin, OprD family FR848_19775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_19780 PF01027 Inhibitor of apoptosis-promoting Bax1 FR848_19785 PF04358 DsrC like protein FR848_19790 PF00708 Acylphosphatase FR848_19795 PF12833 Helix-turn-helix domain FR848_19800 PF01161 Phosphatidylethanolamine-binding protein FR848_19805 PF10672 S-adenosylmethionine-dependent methyltransferase FR848_19805 PF17785 PUA-like domain FR848_19810 PF08755 Hemimethylated DNA-binding protein YccV like FR848_19825 PF13439 Glycosyltransferase Family 4 FR848_19825 PF00534 Glycosyl transferases group 1 FR848_19830 PF00529 HlyD membrane-fusion protein of T1SS FR848_19830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_19835 PF03412 Peptidase C39 family FR848_19835 PF00005 ABC transporter FR848_19835 PF00664 ABC transporter transmembrane region FR848_19850 PF13380 CoA binding domain FR848_19855 PF02142 MGS-like domain FR848_19860 PF12462 DNA helicase IV / RNA helicase N terminal FR848_19860 PF00580 UvrD/REP helicase N-terminal domain FR848_19860 PF13361 UvrD-like helicase C-terminal domain FR848_19865 PF03733 Inner membrane component domain FR848_19870 PF12805 FUSC-like inner membrane protein yccS FR848_19875 PF04993 TfoX N-terminal domain FR848_19875 PF04994 TfoX C-terminal domain FR848_19880 PF03846 Cell division inhibitor SulA FR848_19885 PF01389 OmpA-like transmembrane domain FR848_19885 PF00691 OmpA family FR848_19890 PF17414 MatP C-terminal ribbon-helix-helix domain FR848_19890 PF06303 MatP N-terminal domain FR848_19895 PF13654 AAA domain FR848_19895 PF05362 Lon protease (S16) C-terminal proteolytic domain FR848_19900 PF07977 FabA-like domain FR848_19905 PF04957 Ribosome modulation factor FR848_19910 PF03886 ABC-type transport auxiliary lipoprotein component FR848_19915 PF02470 MlaD protein FR848_19920 PF04403 Paraquat-inducible protein A FR848_19925 PF16326 ABC transporter C-terminal domain FR848_19925 PF00005 ABC transporter FR848_19925 PF12848 ABC transporter FR848_19930 PF10672 S-adenosylmethionine-dependent methyltransferase FR848_19930 PF02926 THUMP domain FR848_19930 PF01170 Putative RNA methylase family UPF0020 FR848_19935 PF03476 MOSC N-terminal beta barrel domain FR848_19935 PF03473 MOSC domain FR848_19935 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_19940 PF07126 Cell-division protein ZapC FR848_19945 PF01180 Dihydroorotate dehydrogenase FR848_19950 PF03358 NADPH-dependent FMN reductase FR848_19955 PF00528 Binding-protein-dependent transport system inner membrane component FR848_19960 PF00005 ABC transporter FR848_19965 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FR848_19965 PF11940 Domain of unknown function (DUF3458) Ig-like fold FR848_19965 PF01433 Peptidase family M1 domain FR848_19970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FR848_19970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FR848_19975 PF01336 OB-fold nucleic acid binding domain FR848_19975 PF00152 tRNA synthetases class II (D, K and N) FR848_19980 PF00267 Gram-negative porin FR848_19985 PF00155 Aminotransferase class I and II FR848_19990 PF00753 Metallo-beta-lactamase superfamily FR848_19995 PF05951 Bacterial protein of unknown function (DUF882) FR848_20000 PF03734 L,D-transpeptidase catalytic domain FR848_20000 PF01471 Putative peptidoglycan binding domain FR848_20005 PF04310 MukB N-terminal FR848_20005 PF16330 MukB hinge domain FR848_20010 PF04288 MukE-like family FR848_20015 PF17192 MukF middle domain FR848_20015 PF17193 MukF C-terminal domain FR848_20015 PF03882 MukF winged-helix domain FR848_20025 PF02698 DUF218 domain FR848_20030 PF01636 Phosphotransferase enzyme family FR848_20035 PF02348 Cytidylyltransferase FR848_20040 PF03966 Trm112p-like protein FR848_20045 PF06224 Winged helix DNA-binding domain FR848_20050 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FR848_20055 PF00005 ABC transporter FR848_20055 PF00664 ABC transporter transmembrane region FR848_20060 PF03772 Competence protein FR848_20060 PF00753 Metallo-beta-lactamase superfamily FR848_20065 PF00216 Bacterial DNA-binding protein FR848_20070 PF00575 S1 RNA binding domain FR848_20075 PF02224 Cytidylate kinase FR848_20080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FR848_20085 PF00266 Aminotransferase class-V FR848_20090 PF04239 Protein of unknown function (DUF421) FR848_20095 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FR848_20095 PF18381 YcaO cyclodehydratase C-terminal domain FR848_20100 PF01226 Formate/nitrite transporter FR848_20105 PF02901 Pyruvate formate lyase-like FR848_20105 PF01228 Glycine radical FR848_20110 PF04055 Radical SAM superfamily FR848_20120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_20130 PF00456 Transketolase, thiamine diphosphate binding domain FR848_20135 PF02779 Transketolase, pyrimidine binding domain FR848_20135 PF02780 Transketolase, C-terminal domain FR848_20140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_20145 PF07690 Major Facilitator Superfamily FR848_20150 PF04976 DMSO reductase anchor subunit (DmsC) FR848_20155 PF13247 4Fe-4S dicluster domain FR848_20155 PF12800 4Fe-4S binding domain FR848_20160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR848_20160 PF00384 Molybdopterin oxidoreductase FR848_20160 PF01568 Molydopterin dinucleotide binding domain FR848_20165 PF02403 Seryl-tRNA synthetase N-terminal domain FR848_20165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FR848_20170 PF12002 MgsA AAA+ ATPase C terminal FR848_20170 PF00004 ATPase family associated with various cellular activities (AAA) FR848_20170 PF16193 AAA C-terminal domain FR848_20175 PF03548 Outer membrane lipoprotein carrier protein LolA FR848_20180 PF17854 FtsK alpha domain FR848_20180 PF09397 Ftsk gamma domain FR848_20180 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FR848_20180 PF01580 FtsK/SpoIIIE family FR848_20185 PF01037 Lrp/AsnC ligand binding domain FR848_20190 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_20195 PF00005 ABC transporter FR848_20195 PF00664 ABC transporter transmembrane region FR848_20200 PF00664 ABC transporter transmembrane region FR848_20200 PF00005 ABC transporter FR848_20205 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FR848_20215 PF01176 Translation initiation factor 1A / IF-1 FR848_20220 PF07724 AAA domain (Cdc48 subfamily) FR848_20220 PF10431 C-terminal, D2-small domain, of ClpB protein FR848_20220 PF02861 Clp amino terminal domain, pathogenicity island component FR848_20220 PF00004 ATPase family associated with various cellular activities (AAA) FR848_20220 PF17871 AAA lid domain FR848_20225 PF02617 ATP-dependent Clp protease adaptor protein ClpS FR848_20230 PF00313 'Cold-shock' DNA-binding domain FR848_20235 PF12704 MacB-like periplasmic core domain FR848_20235 PF00005 ABC transporter FR848_20235 PF02687 FtsX-like permease family FR848_20240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_20245 PF11398 Protein of unknown function (DUF2813) FR848_20250 PF00230 Major intrinsic protein FR848_20255 PF03956 Lysine exporter LysO FR848_20260 PF03063 Prismane/CO dehydrogenase family FR848_20265 PF00970 Oxidoreductase FAD-binding domain FR848_20265 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_20265 PF00175 Oxidoreductase NAD-binding domain FR848_20275 PF00205 Thiamine pyrophosphate enzyme, central domain FR848_20275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_20275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_20280 PF01212 Beta-eliminating lyase FR848_20285 PF13460 NAD(P)H-binding FR848_20285 PF11066 Protein of unknown function (DUF2867) FR848_20290 PF01370 NAD dependent epimerase/dehydratase family FR848_20295 PF01510 N-acetylmuramoyl-L-alanine amidase FR848_20300 PF01906 Putative heavy-metal-binding FR848_20305 PF12883 Protein of unknown function (DUF3828) FR848_20310 PF00005 ABC transporter FR848_20315 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_20320 PF00528 Binding-protein-dependent transport system inner membrane component FR848_20325 PF00528 Binding-protein-dependent transport system inner membrane component FR848_20330 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_20335 PF08448 PAS fold FR848_20335 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB FR848_20335 PF00512 His Kinase A (phospho-acceptor) domain FR848_20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_20335 PF00672 HAMP domain FR848_20340 PF00486 Transcriptional regulatory protein, C terminal FR848_20340 PF00072 Response regulator receiver domain FR848_20345 PF05958 tRNA (Uracil-5-)-methyltransferase FR848_20350 PF10767 Protein of unknown function (DUF2593) FR848_20355 PF00528 Binding-protein-dependent transport system inner membrane component FR848_20360 PF00528 Binding-protein-dependent transport system inner membrane component FR848_20365 PF08402 TOBE domain FR848_20365 PF00005 ABC transporter FR848_20370 PF13416 Bacterial extracellular solute-binding protein FR848_20375 PF10722 Putative bacterial sensory transduction regulator FR848_20380 PF08443 RimK-like ATP-grasp domain FR848_20380 PF18030 RimK PreATP-grasp domain FR848_20385 PF00881 Nitroreductase family FR848_20390 PF07214 Protein of unknown function (DUF1418) FR848_20395 PF00462 Glutaredoxin FR848_20400 PF11045 Putative inner membrane protein of Enterobacteriaceae FR848_20405 PF02080 TrkA-C domain FR848_20405 PF06826 Predicted Permease Membrane Region FR848_20445 PF13614 AAA domain FR848_20460 PF16452 Bacteriophage CI repressor C-terminal domain FR848_20460 PF07022 Bacteriophage CI repressor helix-turn-helix domain FR848_20480 PF00440 Bacterial regulatory proteins, tetR family FR848_20485 PF07690 Major Facilitator Superfamily FR848_20495 PF07690 Major Facilitator Superfamily FR848_20500 PF01569 PAP2 superfamily FR848_20505 PF08220 DeoR-like helix-turn-helix domain FR848_20505 PF00455 DeoR C terminal sensor domain FR848_20510 PF07943 Penicillin-binding protein 5, C-terminal domain FR848_20510 PF00768 D-alanyl-D-alanine carboxypeptidase FR848_20515 PF13417 Glutathione S-transferase, N-terminal domain FR848_20515 PF00043 Glutathione S-transferase, C-terminal domain FR848_20520 PF07995 Glucose / Sorbosone dehydrogenase FR848_20525 PF10799 Biofilm formation protein (YliH/bssR) FR848_20530 PF01306 LacY proton/sugar symporter FR848_20540 PF04055 Radical SAM superfamily FR848_20540 PF00919 Uncharacterized protein family UPF0004 FR848_20540 PF18693 TRAM domain FR848_20545 PF12911 N-terminal TM domain of oligopeptide transport permease C FR848_20545 PF00528 Binding-protein-dependent transport system inner membrane component FR848_20550 PF00528 Binding-protein-dependent transport system inner membrane component FR848_20555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_20560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_20560 PF00005 ABC transporter FR848_20565 PF01112 Asparaginase FR848_20575 PF03454 MoeA C-terminal region (domain IV) FR848_20575 PF00994 Probable molybdopterin binding domain FR848_20575 PF03453 MoeA N-terminal region (domain I and II) FR848_20580 PF00899 ThiF family FR848_20585 PF04055 Radical SAM superfamily FR848_20600 PF07350 Protein of unknown function (DUF1479) FR848_20605 PF00356 Bacterial regulatory proteins, lacI family FR848_20610 PF07690 Major Facilitator Superfamily FR848_20615 PF01055 Glycosyl hydrolases family 31 FR848_20615 PF16338 Domain of unknown function (DUF4968) FR848_20615 PF17137 Domain of unknown function (DUF5110) FR848_20615 PF13802 Galactose mutarotase-like FR848_20625 PF00005 ABC transporter FR848_20625 PF12848 ABC transporter FR848_20635 PF03734 L,D-transpeptidase catalytic domain FR848_20635 PF17969 L,D-transpeptidase C-terminal domain FR848_20640 PF00392 Bacterial regulatory proteins, gntR family FR848_20640 PF07702 UTRA domain FR848_20645 PF00232 Glycosyl hydrolase family 1 FR848_20650 PF00248 Aldo/keto reductase family FR848_20655 PF03600 Citrate transporter FR848_20660 PF02742 Iron dependent repressor, metal binding and dimerisation domain FR848_20660 PF01325 Iron dependent repressor, N-terminal DNA binding domain FR848_20670 PF00884 Sulfatase FR848_20675 PF13505 Outer membrane protein beta-barrel domain FR848_20680 PF00892 EamA-like transporter family FR848_20685 PF00210 Ferritin-like domain FR848_20690 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_20695 PF00528 Binding-protein-dependent transport system inner membrane component FR848_20700 PF00005 ABC transporter FR848_20705 PF03797 Autotransporter beta-domain FR848_20710 PF00924 Mechanosensitive ion channel FR848_20715 PF05971 RNA methyltransferase FR848_20725 PF00593 TonB dependent receptor FR848_20725 PF07715 TonB-dependent Receptor Plug Domain FR848_20730 PF18331 PKHD-type hydroxylase C-terminal domain FR848_20730 PF13640 2OG-Fe(II) oxygenase superfamily FR848_20735 PF01258 Prokaryotic dksA/traR C4-type zinc finger FR848_20740 PF07338 Protein of unknown function (DUF1471) FR848_20745 PF02885 Glycosyl transferase family, helical bundle domain FR848_20750 PF13307 Helicase C-terminal domain FR848_20750 PF06733 DEAD_2 FR848_20755 PF00271 Helicase conserved C-terminal domain FR848_20755 PF00270 DEAD/DEAH box helicase FR848_20760 PF02779 Transketolase, pyrimidine binding domain FR848_20760 PF02780 Transketolase, C-terminal domain FR848_20765 PF00456 Transketolase, thiamine diphosphate binding domain FR848_20775 PF07690 Major Facilitator Superfamily FR848_20785 PF03466 LysR substrate binding domain FR848_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_20790 PF00440 Bacterial regulatory proteins, tetR family FR848_20790 PF09209 Tetracyclin repressor-like, C-terminal domain FR848_20795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_20800 PF00005 ABC transporter FR848_20815 PF11076 Putative inner membrane protein YbhQ FR848_20820 PF03372 Endonuclease/Exonuclease/phosphatase family FR848_20825 PF13091 PLD-like domain FR848_20830 PF03706 Lysylphosphatidylglycerol synthase TM region FR848_20835 PF01027 Inhibitor of apoptosis-promoting Bax1 FR848_20840 PF02391 MoaE protein FR848_20845 PF02597 ThiS family FR848_20850 PF01967 MoaC family FR848_20855 PF00994 Probable molybdopterin binding domain FR848_20860 PF04055 Radical SAM superfamily FR848_20860 PF06463 Molybdenum Cofactor Synthesis C FR848_20865 PF01933 Uncharacterised protein family UPF0052 FR848_20870 PF08019 Phosphoethanolamine transferase EptA/EptB FR848_20870 PF00884 Sulfatase FR848_20875 PF00072 Response regulator receiver domain FR848_20875 PF00486 Transcriptional regulatory protein, C terminal FR848_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_20880 PF00512 His Kinase A (phospho-acceptor) domain FR848_20890 PF00271 Helicase conserved C-terminal domain FR848_20890 PF04851 Type III restriction enzyme, res subunit FR848_20890 PF17757 UvrB interaction domain FR848_20890 PF02151 UvrB/uvrC motif FR848_20890 PF12344 Ultra-violet resistance protein B FR848_20900 PF00005 ABC transporter FR848_20910 PF08241 Methyltransferase domain FR848_20915 PF00155 Aminotransferase class I and II FR848_20920 PF06968 Biotin and Thiamin Synthesis associated domain FR848_20920 PF04055 Radical SAM superfamily FR848_20925 PF00202 Aminotransferase class-III FR848_20930 PF01161 Phosphatidylethanolamine-binding protein FR848_20935 PF00324 Amino acid permease FR848_20940 PF00221 Aromatic amino acid lyase FR848_20945 PF17392 Urocanase C-terminal domain FR848_20945 PF17391 Urocanase N-terminal domain FR848_20945 PF01175 Urocanase Rossmann-like domain FR848_20950 PF07702 UTRA domain FR848_20950 PF00392 Bacterial regulatory proteins, gntR family FR848_20955 PF01979 Amidohydrolase family FR848_20960 PF01095 Pectinesterase FR848_20975 PF13411 MerR HTH family regulatory protein FR848_20980 PF04940 Sensors of blue-light using FAD FR848_20980 PF00563 EAL domain FR848_20985 PF10798 Biofilm development protein YmgB/AriR FR848_20995 PF10798 Biofilm development protein YmgB/AriR FR848_21000 PF00392 Bacterial regulatory proteins, gntR family FR848_21000 PF00155 Aminotransferase class I and II FR848_21005 PF13673 Acetyltransferase (GNAT) domain FR848_21010 PF10282 Lactonase, 7-bladed beta-propeller FR848_21020 PF00005 ABC transporter FR848_21020 PF03459 TOBE domain FR848_21025 PF00528 Binding-protein-dependent transport system inner membrane component FR848_21035 PF10766 Multidrug efflux pump-associated protein AcrZ FR848_21040 PF03459 TOBE domain FR848_21040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_21045 PF00005 ABC transporter FR848_21050 PF16363 GDP-mannose 4,6 dehydratase FR848_21055 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FR848_21055 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FR848_21060 PF08544 GHMP kinases C terminal FR848_21060 PF00288 GHMP kinases N terminal domain FR848_21060 PF10509 Galactokinase galactose-binding signature FR848_21065 PF01263 Aldose 1-epimerase FR848_21070 PF00300 Histidine phosphatase superfamily (branch 1) FR848_21075 PF00793 DAHP synthetase I family FR848_21080 PF13985 YbgS-like protein FR848_21085 PF01545 Cation efflux family FR848_21090 PF04973 Nicotinamide mononucleotide transporter FR848_21095 PF02445 Quinolinate synthetase A protein FR848_21130 PF16331 TolA binding protein trimerisation FR848_21130 PF13174 Tetratricopeptide repeat FR848_21135 PF00691 OmpA family FR848_21140 PF07676 WD40-like Beta Propeller Repeat FR848_21140 PF04052 TolB amino-terminal domain FR848_21145 PF06519 TolA C-terminal FR848_21150 PF02472 Biopolymer transport protein ExbD/TolR FR848_21155 PF01618 MotA/TolQ/ExbB proton channel family FR848_21160 PF03061 Thioesterase superfamily FR848_21165 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FR848_21170 PF08173 Membrane bound YbgT-like protein FR848_21175 PF02322 Cytochrome bd terminal oxidase subunit II FR848_21180 PF01654 Cytochrome bd terminal oxidase subunit I FR848_21185 PF02310 B12 binding domain FR848_21190 PF13941 MutL protein FR848_21195 PF06368 Methylaspartate mutase E chain (MutE) FR848_21200 PF05034 Methylaspartate ammonia-lyase N-terminus FR848_21200 PF07476 Methylaspartate ammonia-lyase C-terminus FR848_21215 PF00375 Sodium:dicarboxylate symporter family FR848_21220 PF04960 Glutaminase FR848_21225 PF05683 Fumarase C-terminus FR848_21225 PF05681 Fumarate hydratase (Fumerase) FR848_21230 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FR848_21240 PF03466 LysR substrate binding domain FR848_21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_21245 PF12833 Helix-turn-helix domain FR848_21245 PF10114 Sensory domain found in PocR FR848_21250 PF00549 CoA-ligase FR848_21250 PF02629 CoA binding domain FR848_21255 PF08442 ATP-grasp domain FR848_21255 PF00549 CoA-ligase FR848_21260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FR848_21260 PF00364 Biotin-requiring enzyme FR848_21260 PF02817 e3 binding domain FR848_21265 PF00676 Dehydrogenase E1 component FR848_21265 PF16870 2-oxoglutarate dehydrogenase C-terminal FR848_21265 PF02779 Transketolase, pyrimidine binding domain FR848_21265 PF16078 2-oxoglutarate dehydrogenase N-terminus FR848_21270 PF13085 2Fe-2S iron-sulfur cluster binding domain FR848_21275 PF00890 FAD binding domain FR848_21275 PF02910 Fumarate reductase flavoprotein C-term FR848_21280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FR848_21285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FR848_21290 PF00285 Citrate synthase, C-terminal domain FR848_21295 PF06827 Zinc finger found in FPG and IleRS FR848_21295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FR848_21295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FR848_21300 PF01470 Pyroglutamyl peptidase FR848_21315 PF03746 LamB/YcsF family FR848_21320 PF02626 Carboxyltransferase domain, subdomain A and B FR848_21325 PF02682 Carboxyltransferase domain, subdomain C and D FR848_21330 PF01784 NIF3 (NGG1p interacting factor 3) FR848_21335 PF00854 POT family FR848_21340 PF00875 DNA photolyase FR848_21340 PF03441 FAD binding domain of DNA photolyase FR848_21345 PF10725 Protein of unknown function (DUF2517) FR848_21350 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) FR848_21355 PF03814 Potassium-transporting ATPase A subunit FR848_21365 PF02669 K+-transporting ATPase, c chain FR848_21370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_21370 PF02702 Osmosensitive K+ channel His kinase sensor domain FR848_21370 PF00512 His Kinase A (phospho-acceptor) domain FR848_21370 PF13493 Domain of unknown function (DUF4118) FR848_21370 PF13492 GAF domain FR848_21375 PF00072 Response regulator receiver domain FR848_21375 PF00486 Transcriptional regulatory protein, C terminal FR848_21380 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_21385 PF01261 Xylose isomerase-like TIM barrel FR848_21390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_21390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_21395 PF02653 Branched-chain amino acid transport system / permease component FR848_21400 PF00005 ABC transporter FR848_21405 PF13407 Periplasmic binding protein domain FR848_21410 PF00107 Zinc-binding dehydrogenase FR848_21410 PF08240 Alcohol dehydrogenase GroES-like domain FR848_21415 PF08220 DeoR-like helix-turn-helix domain FR848_21415 PF00455 DeoR C terminal sensor domain FR848_21425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FR848_21425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FR848_21425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FR848_21425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FR848_21430 PF17206 SeqA protein N-terminal domain FR848_21430 PF03925 SeqA protein C-terminal domain FR848_21435 PF12697 Alpha/beta hydrolase family FR848_21440 PF01402 Ribbon-helix-helix protein, copG family FR848_21445 PF00258 Flavodoxin FR848_21450 PF01475 Ferric uptake regulator family FR848_21455 PF03466 LysR substrate binding domain FR848_21455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_21460 PF14537 Cytochrome c3 FR848_21460 PF00890 FAD binding domain FR848_21470 PF07690 Major Facilitator Superfamily FR848_21475 PF13982 YbfN-like lipoprotein FR848_21480 PF03573 outer membrane porin, OprD family FR848_21490 PF00749 tRNA synthetases class I (E and Q), catalytic domain FR848_21490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FR848_21495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FR848_21495 PF02378 Phosphotransferase system, EIIC FR848_21495 PF00367 phosphotransferase system, EIIB FR848_21500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FR848_21505 PF01979 Amidohydrolase family FR848_21510 PF01047 MarR family FR848_21510 PF00480 ROK family FR848_21515 PF13344 Haloacid dehalogenase-like hydrolase FR848_21520 PF13537 Glutamine amidotransferase domain FR848_21520 PF00733 Asparagine synthase FR848_21560 PF01494 FAD binding domain FR848_21565 PF01938 TRAM domain FR848_21565 PF00919 Uncharacterized protein family UPF0004 FR848_21565 PF04055 Radical SAM superfamily FR848_21570 PF02562 PhoH-like protein FR848_21575 PF02130 Uncharacterized protein family UPF0054 FR848_21580 PF03471 Transporter associated domain FR848_21580 PF00571 CBS domain FR848_21585 PF00795 Carbon-nitrogen hydrolase FR848_21590 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_21595 PF00528 Binding-protein-dependent transport system inner membrane component FR848_21600 PF00528 Binding-protein-dependent transport system inner membrane component FR848_21605 PF00005 ABC transporter FR848_21610 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FR848_21610 PF17287 POTRA domain FR848_21610 PF08479 POTRA domain, ShlB-type FR848_21615 PF05860 haemagglutination activity domain FR848_21615 PF14436 Bacterial EndoU nuclease FR848_21615 PF05594 Haemagluttinin repeat FR848_21615 PF13332 Hemagglutinin repeat FR848_21615 PF04829 Pre-toxin domain with VENN motif FR848_21620 PF07295 Zinc-ribbon containing domain FR848_21625 PF00133 tRNA synthetases class I (I, L, M and V) FR848_21625 PF08264 Anticodon-binding domain of tRNA FR848_21625 PF13603 Leucyl-tRNA synthetase, Domain 2 FR848_21630 PF04390 Lipopolysaccharide-assembly FR848_21635 PF06144 DNA polymerase III, delta subunit FR848_21635 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FR848_21640 PF01467 Cytidylyltransferase-like FR848_21645 PF00300 Histidine phosphatase superfamily (branch 1) FR848_21655 PF02590 Predicted SPOUT methyltransferase FR848_21660 PF03717 Penicillin-binding Protein dimerisation domain FR848_21660 PF00905 Penicillin binding protein transpeptidase domain FR848_21665 PF01098 Cell cycle protein FR848_21670 PF03330 Lytic transglycolase FR848_21670 PF05036 Sporulation related domain FR848_21675 PF07943 Penicillin-binding protein 5, C-terminal domain FR848_21675 PF00768 D-alanyl-D-alanine carboxypeptidase FR848_21680 PF04359 Protein of unknown function (DUF493) FR848_21685 PF03099 Biotin/lipoate A/B protein ligase family FR848_21690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_21690 PF03466 LysR substrate binding domain FR848_21695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FR848_21695 PF04055 Radical SAM superfamily FR848_21700 PF02416 mttA/Hcf106 family FR848_21705 PF00795 Carbon-nitrogen hydrolase FR848_21710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FR848_21715 PF00313 'Cold-shock' DNA-binding domain FR848_21720 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FR848_21725 PF03606 C4-dicarboxylate anaerobic carrier FR848_21730 PF00445 Ribonuclease T2 family FR848_21735 PF14760 Rnk N-terminus FR848_21735 PF01272 Transcription elongation factor, GreA/GreB, C-term FR848_21740 PF00582 Universal stress protein family FR848_21745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_21745 PF13192 Thioredoxin domain FR848_21755 PF10417 C-terminal domain of 1-Cys peroxiredoxin FR848_21755 PF00578 AhpC/TSA family FR848_21760 PF03466 LysR substrate binding domain FR848_21760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_21765 PF11922 Domain of unknown function (DUF3440) FR848_21765 PF01507 Phosphoadenosine phosphosulfate reductase family FR848_21770 PF02195 ParB-like nuclease domain FR848_21775 PF00155 Aminotransferase class I and II FR848_21785 PF03079 ARD/ARD' family FR848_21795 PF01568 Molydopterin dinucleotide binding domain FR848_21795 PF00384 Molybdopterin oxidoreductase FR848_21805 PF00005 ABC transporter FR848_21810 PF02653 Branched-chain amino acid transport system / permease component FR848_21815 PF02653 Branched-chain amino acid transport system / permease component FR848_21825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_21825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_21830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_21830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_21835 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_21840 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FR848_21850 PF07969 Amidohydrolase family FR848_21855 PF00356 Bacterial regulatory proteins, lacI family FR848_21860 PF00459 Inositol monophosphatase family FR848_21865 PF07690 Major Facilitator Superfamily FR848_21870 PF00328 Histidine phosphatase superfamily (branch 2) FR848_21875 PF01008 Initiation factor 2 subunit family FR848_21880 PF01636 Phosphotransferase enzyme family FR848_21895 PF02653 Branched-chain amino acid transport system / permease component FR848_21900 PF00005 ABC transporter FR848_21905 PF00465 Iron-containing alcohol dehydrogenase FR848_21920 PF04328 Selenoprotein, putative FR848_21925 PF13722 5TM C-terminal transporter carbon starvation CstA FR848_21925 PF02554 Carbon starvation protein CstA FR848_21935 PF03061 Thioesterase superfamily FR848_21945 PF00857 Isochorismatase family FR848_21945 PF00550 Phosphopantetheine attachment site FR848_21950 PF13193 AMP-binding enzyme C-terminal domain FR848_21950 PF00501 AMP-binding enzyme FR848_21955 PF00425 chorismate binding enzyme FR848_21960 PF01497 Periplasmic binding protein FR848_21965 PF00704 Glycosyl hydrolases family 18 FR848_21975 PF05977 Transmembrane secretion effector FR848_21980 PF01032 FecCD transport family FR848_21985 PF01032 FecCD transport family FR848_21990 PF00005 ABC transporter FR848_21995 PF00550 Phosphopantetheine attachment site FR848_21995 PF00501 AMP-binding enzyme FR848_21995 PF13193 AMP-binding enzyme C-terminal domain FR848_21995 PF00668 Condensation domain FR848_21995 PF00975 Thioesterase domain FR848_22000 PF03621 MbtH-like protein FR848_22005 PF11806 Domain of unknown function (DUF3327) FR848_22005 PF00756 Putative esterase FR848_22010 PF00593 TonB dependent receptor FR848_22010 PF07715 TonB-dependent Receptor Plug Domain FR848_22015 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FR848_22015 PF01648 4'-phosphopantetheinyl transferase superfamily FR848_22020 PF02779 Transketolase, pyrimidine binding domain FR848_22020 PF02780 Transketolase, C-terminal domain FR848_22025 PF00456 Transketolase, thiamine diphosphate binding domain FR848_22030 PF00325 Bacterial regulatory proteins, crp family FR848_22030 PF04198 Putative sugar-binding domain FR848_22035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR848_22035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_22040 PF13407 Periplasmic binding protein domain FR848_22050 PF00005 ABC transporter FR848_22055 PF02653 Branched-chain amino acid transport system / permease component FR848_22070 PF01848 Hok/gef family FR848_22075 PF02028 BCCT, betaine/carnitine/choline family transporter FR848_22080 PF13977 BetI-type transcriptional repressor, C-terminal FR848_22080 PF00440 Bacterial regulatory proteins, tetR family FR848_22085 PF00171 Aldehyde dehydrogenase family FR848_22105 PF00528 Binding-protein-dependent transport system inner membrane component FR848_22115 PF00005 ABC transporter FR848_22115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_22120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_22120 PF00005 ABC transporter FR848_22125 PF00202 Aminotransferase class-III FR848_22130 PF00106 short chain dehydrogenase FR848_22135 PF00005 ABC transporter FR848_22140 PF00528 Binding-protein-dependent transport system inner membrane component FR848_22155 PF00392 Bacterial regulatory proteins, gntR family FR848_22155 PF00155 Aminotransferase class I and II FR848_22160 PF01810 LysE type translocator FR848_22175 PF07687 Peptidase dimerisation domain FR848_22175 PF01546 Peptidase family M20/M25/M40 FR848_22180 PF01425 Amidase FR848_22185 PF00005 ABC transporter FR848_22185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_22190 PF00005 ABC transporter FR848_22190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_22195 PF00528 Binding-protein-dependent transport system inner membrane component FR848_22195 PF12911 N-terminal TM domain of oligopeptide transport permease C FR848_22200 PF00528 Binding-protein-dependent transport system inner membrane component FR848_22205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_22210 PF04107 Glutamate-cysteine ligase family 2(GCS2) FR848_22215 PF09992 Phosphodiester glycosidase FR848_22220 PF00873 AcrB/AcrD/AcrF family FR848_22225 PF13533 Biotin-lipoyl like FR848_22230 PF00689 Cation transporting ATPase, C-terminus FR848_22230 PF00690 Cation transporter/ATPase, N-terminus FR848_22235 PF06643 Protein of unknown function (DUF1158) FR848_22245 PF07715 TonB-dependent Receptor Plug Domain FR848_22245 PF00593 TonB dependent receptor FR848_22250 PF12833 Helix-turn-helix domain FR848_22255 PF12706 Beta-lactamase superfamily domain FR848_22265 PF04237 YjbR FR848_22270 PF00881 Nitroreductase family FR848_22275 PF01478 Type IV leader peptidase family FR848_22275 PF06750 Bacterial Peptidase A24 N-terminal domain FR848_22280 PF01203 Type II secretion system (T2SS), protein N FR848_22290 PF05134 Type II secretion system (T2SS), protein L FR848_22290 PF12693 GspL periplasmic domain FR848_22295 PF03934 Type II secretion system (T2SS), protein K FR848_22300 PF07963 Prokaryotic N-terminal methylation motif FR848_22300 PF11612 Type II secretion system (T2SS), protein J FR848_22305 PF02501 Type II secretion system (T2SS), protein I FR848_22305 PF07963 Prokaryotic N-terminal methylation motif FR848_22310 PF07963 Prokaryotic N-terminal methylation motif FR848_22315 PF07963 Prokaryotic N-terminal methylation motif FR848_22315 PF08334 Type II secretion system (T2SS), protein G FR848_22320 PF00482 Type II secretion system (T2SS), protein F FR848_22325 PF00437 Type II/IV secretion system protein FR848_22330 PF03958 Bacterial type II/III secretion system short domain FR848_22330 PF00263 Bacterial type II and III secretion system protein FR848_22335 PF11356 Type II secretion system protein C FR848_22340 PF08244 Glycosyl hydrolases family 32 C terminal FR848_22340 PF00251 Glycosyl hydrolases family 32 N-terminal domain FR848_22345 PF03613 PTS system mannose/fructose/sorbose family IID component FR848_22350 PF03609 PTS system sorbose-specific iic component FR848_22355 PF03830 PTS system sorbose subfamily IIB component FR848_22360 PF03830 PTS system sorbose subfamily IIB component FR848_22360 PF03610 PTS system fructose IIA component FR848_22365 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FR848_22370 PF03610 PTS system fructose IIA component FR848_22370 PF00874 PRD domain FR848_22370 PF00158 Sigma-54 interaction domain FR848_22380 PF07690 Major Facilitator Superfamily FR848_22385 PF00924 Mechanosensitive ion channel FR848_22390 PF00356 Bacterial regulatory proteins, lacI family FR848_22395 PF00293 NUDIX domain FR848_22405 PF16449 Fimbrillin MatB FR848_22410 PF18649 EcpB C-terminal domain FR848_22415 PF16967 E-set like domain FR848_22415 PF15976 CS1-pili formation C-terminal FR848_22430 PF00196 Bacterial regulatory proteins, luxR family FR848_22435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_22435 PF03466 LysR substrate binding domain FR848_22460 PF03825 Nucleoside H+ symporter FR848_22465 PF00324 Amino acid permease FR848_22470 PF00593 TonB dependent receptor FR848_22470 PF07715 TonB-dependent Receptor Plug Domain FR848_22475 PF00248 Aldo/keto reductase family FR848_22480 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_22485 PF01546 Peptidase family M20/M25/M40 FR848_22485 PF07687 Peptidase dimerisation domain FR848_22510 PF01032 FecCD transport family FR848_22515 PF00005 ABC transporter FR848_22520 PF00294 pfkB family carbohydrate kinase FR848_22525 PF11471 Maltoporin periplasmic N-terminal extension FR848_22525 PF02264 LamB porin FR848_22530 PF02378 Phosphotransferase system, EIIC FR848_22530 PF00367 phosphotransferase system, EIIB FR848_22535 PF08244 Glycosyl hydrolases family 32 C terminal FR848_22535 PF00251 Glycosyl hydrolases family 32 N-terminal domain FR848_22540 PF13407 Periplasmic binding protein domain FR848_22540 PF00356 Bacterial regulatory proteins, lacI family FR848_22555 PF00874 PRD domain FR848_22555 PF03123 CAT RNA binding domain FR848_22560 PF00232 Glycosyl hydrolase family 1 FR848_22565 PF00367 phosphotransferase system, EIIB FR848_22565 PF02378 Phosphotransferase system, EIIC FR848_22565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FR848_22570 PF02653 Branched-chain amino acid transport system / permease component FR848_22575 PF00005 ABC transporter FR848_22580 PF13407 Periplasmic binding protein domain FR848_22590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_22590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_22595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_22595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_22610 PF01336 OB-fold nucleic acid binding domain FR848_22610 PF00152 tRNA synthetases class II (D, K and N) FR848_22620 PF00854 POT family FR848_22625 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FR848_22625 PF01276 Orn/Lys/Arg decarboxylase, major domain FR848_22625 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FR848_22630 PF13520 Amino acid permease FR848_22640 PF00486 Transcriptional regulatory protein, C terminal FR848_22640 PF18500 CadC C-terminal domain 1 FR848_22650 PF03466 LysR substrate binding domain FR848_22650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_22660 PF16123 Hydroxyacylglutathione hydrolase C-terminus FR848_22660 PF00753 Metallo-beta-lactamase superfamily FR848_22665 PF00295 Glycosyl hydrolases family 28 FR848_22670 PF04299 Putative FMN-binding domain FR848_22685 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FR848_22685 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FR848_22695 PF09190 DALR domain FR848_22695 PF01406 tRNA synthetases class I (C) catalytic domain FR848_22700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FR848_22705 PF00149 Calcineurin-like phosphoesterase FR848_22710 PF00731 AIR carboxylase FR848_22715 PF02222 ATP-grasp domain FR848_22715 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FR848_22730 PF08803 Putative mono-oxygenase ydhR FR848_22740 PF00005 ABC transporter FR848_22745 PF13472 GDSL-like Lipase/Acylhydrolase family FR848_22750 PF00106 short chain dehydrogenase FR848_22755 PF00085 Thioredoxin FR848_22760 PF03649 Uncharacterised protein family (UPF0014) FR848_22765 PF00005 ABC transporter FR848_22770 PF01145 SPFH domain / Band 7 family FR848_22770 PF16200 C-terminal region of band_7 FR848_22775 PF01957 NfeD-like C-terminal, partner-binding FR848_22790 PF13411 MerR HTH family regulatory protein FR848_22795 PF00403 Heavy-metal-associated domain FR848_22805 PF01618 MotA/TolQ/ExbB proton channel family FR848_22825 PF01963 TraB family FR848_22830 PF04073 Aminoacyl-tRNA editing domain FR848_22835 PF02872 5'-nucleotidase, C-terminal domain FR848_22835 PF00149 Calcineurin-like phosphoesterase FR848_22840 PF07690 Major Facilitator Superfamily FR848_22845 PF02254 TrkA-N domain FR848_22845 PF00999 Sodium/hydrogen exchanger family FR848_22850 PF00294 pfkB family carbohydrate kinase FR848_22855 PF00762 Ferrochelatase FR848_22860 PF05191 Adenylate kinase, active site lid FR848_22865 PF00183 Hsp90 protein FR848_22865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_22870 PF13662 Toprim domain FR848_22870 PF02132 RecR protein FR848_22875 PF02575 YbaB/EbfC DNA-binding family FR848_22880 PF12170 DNA polymerase III tau subunit V interacting with alpha FR848_22880 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FR848_22880 PF12169 DNA polymerase III subunits gamma and tau domain III FR848_22885 PF00156 Phosphoribosyl transferase domain FR848_22890 PF04304 Protein of unknown function (DUF454) FR848_22895 PF07445 Primosomal replication protein priC FR848_22900 PF10689 Protein of unknown function (DUF2496) FR848_22905 PF04754 Putative transposase, YhgA-like FR848_22910 PF12794 Mechanosensitive ion channel inner membrane domain 1 FR848_22910 PF00924 Mechanosensitive ion channel FR848_22910 PF12795 Mechanosensitive ion channel porin domain FR848_22915 PF08361 MAATS-type transcriptional repressor, C-terminal region FR848_22915 PF00440 Bacterial regulatory proteins, tetR family FR848_22920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_22920 PF00529 HlyD membrane-fusion protein of T1SS FR848_22925 PF00873 AcrB/AcrD/AcrF family FR848_22930 PF10757 Biofilm formation regulator YbaJ FR848_22935 PF05321 Haemolysin expression modulating protein FR848_22940 PF12464 Maltose acetyltransferase FR848_22940 PF14602 Hexapeptide repeat of succinyl-transferase FR848_22945 PF10777 Inner membrane protein YlaC FR848_22950 PF00155 Aminotransferase class I and II FR848_22950 PF00392 Bacterial regulatory proteins, gntR family FR848_22960 PF00444 Ribosomal protein L36 FR848_22965 PF01197 Ribosomal protein L31 FR848_22970 PF00356 Bacterial regulatory proteins, lacI family FR848_22975 PF02264 LamB porin FR848_22980 PF00367 phosphotransferase system, EIIB FR848_22980 PF02378 Phosphotransferase system, EIIC FR848_22985 PF02449 Beta-galactosidase FR848_22985 PF08533 Beta-galactosidase C-terminal domain FR848_22985 PF08532 Beta-galactosidase trimerisation domain FR848_22990 PF07745 Glycosyl hydrolase family 53 FR848_22995 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23000 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23005 PF13416 Bacterial extracellular solute-binding protein FR848_23010 PF17912 MalK OB fold domain FR848_23010 PF00005 ABC transporter FR848_23015 PF12792 CSS motif domain associated with EAL FR848_23015 PF00563 EAL domain FR848_23020 PF02583 Metal-sensitive transcriptional repressor FR848_23025 PF03824 High-affinity nickel-transport protein FR848_23030 PF07237 Protein of unknown function (DUF1428) FR848_23065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FR848_23070 PF09619 Type III secretion system lipoprotein chaperone (YscW) FR848_23080 PF00909 Ammonium Transporter Family FR848_23085 PF00543 Nitrogen regulatory protein P-II FR848_23095 PF00664 ABC transporter transmembrane region FR848_23095 PF00005 ABC transporter FR848_23100 PF00005 ABC transporter FR848_23100 PF00664 ABC transporter transmembrane region FR848_23105 PF01037 Lrp/AsnC ligand binding domain FR848_23105 PF13404 AsnC-type helix-turn-helix domain FR848_23120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_23120 PF12793 Sugar transport-related sRNA regulator N-term FR848_23125 PF06508 Queuosine biosynthesis protein QueC FR848_23145 PF13145 PPIC-type PPIASE domain FR848_23150 PF00216 Bacterial DNA-binding protein FR848_23155 PF02190 ATP-dependent protease La (LON) substrate-binding domain FR848_23155 PF00004 ATPase family associated with various cellular activities (AAA) FR848_23155 PF05362 Lon protease (S16) C-terminal proteolytic domain FR848_23160 PF07724 AAA domain (Cdc48 subfamily) FR848_23160 PF10431 C-terminal, D2-small domain, of ClpB protein FR848_23160 PF06689 ClpX C4-type zinc finger FR848_23165 PF00574 Clp protease FR848_23170 PF05697 Bacterial trigger factor protein (TF) FR848_23170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR848_23170 PF05698 Bacterial trigger factor protein (TF) C-terminus FR848_23185 PF01722 BolA-like protein FR848_23190 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FR848_23190 PF03923 Uncharacterized lipoprotein FR848_23195 PF07690 Major Facilitator Superfamily FR848_23200 PF06481 COX Aromatic Rich Motif FR848_23200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FR848_23205 PF00115 Cytochrome C and Quinol oxidase polypeptide I FR848_23210 PF00510 Cytochrome c oxidase subunit III FR848_23215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FR848_23220 PF01040 UbiA prenyltransferase family FR848_23230 PF01614 Bacterial transcriptional regulator FR848_23230 PF09339 IclR helix-turn-helix domain FR848_23235 PF01488 Shikimate / quinate 5-dehydrogenase FR848_23235 PF08501 Shikimate dehydrogenase substrate binding domain FR848_23235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FR848_23250 PF00890 FAD binding domain FR848_23260 PF07690 Major Facilitator Superfamily FR848_23275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_23275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_23280 PF07690 Major Facilitator Superfamily FR848_23285 PF04461 Protein of unknown function (DUF520) FR848_23290 PF08546 Ketopantoate reductase PanE/ApbA C terminal FR848_23290 PF02558 Ketopantoate reductase PanE/ApbA FR848_23295 PF01965 DJ-1/PfpI family FR848_23300 PF02568 Thiamine biosynthesis protein (ThiI) FR848_23300 PF02926 THUMP domain FR848_23305 PF02609 Exonuclease VII small subunit FR848_23310 PF00348 Polyprenyl synthetase FR848_23315 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FR848_23315 PF02780 Transketolase, C-terminal domain FR848_23315 PF02779 Transketolase, pyrimidine binding domain FR848_23320 PF00248 Aldo/keto reductase family FR848_23325 PF04608 Phosphatidylglycerophosphatase A FR848_23330 PF02769 AIR synthase related protein, C-terminal domain FR848_23330 PF00586 AIR synthase related protein, N-terminal domain FR848_23335 PF01029 NusB family FR848_23340 PF00885 6,7-dimethyl-8-ribityllumazine synthase FR848_23345 PF01872 RibD C-terminal domain FR848_23345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FR848_23350 PF03477 ATP cone domain FR848_23355 PF11622 Protein of unknown function (DUF3251) FR848_23360 PF03502 Nucleoside-specific channel-forming protein, Tsx FR848_23380 PF07549 SecD/SecF GG Motif FR848_23380 PF02355 Protein export membrane protein FR848_23385 PF13721 SecD export protein N-terminal TM region FR848_23385 PF07549 SecD/SecF GG Motif FR848_23385 PF02355 Protein export membrane protein FR848_23390 PF02699 Preprotein translocase subunit FR848_23395 PF01702 Queuine tRNA-ribosyltransferase FR848_23400 PF02547 Queuosine biosynthesis protein FR848_23405 PF04336 Acyl carrier protein phosphodiesterase FR848_23410 PF00578 AhpC/TSA family FR848_23410 PF10417 C-terminal domain of 1-Cys peroxiredoxin FR848_23425 PF07969 Amidohydrolase family FR848_23435 PF00857 Isochorismatase family FR848_23440 PF03466 LysR substrate binding domain FR848_23440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_23445 PF02903 Alpha amylase, N-terminal ig-like domain FR848_23445 PF00128 Alpha amylase, catalytic domain FR848_23450 PF00324 Amino acid permease FR848_23455 PF05525 Branched-chain amino acid transport protein FR848_23460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_23460 PF00512 His Kinase A (phospho-acceptor) domain FR848_23460 PF00989 PAS fold FR848_23460 PF11808 Phosphate regulon sensor protein PhoR FR848_23465 PF00072 Response regulator receiver domain FR848_23465 PF00486 Transcriptional regulatory protein, C terminal FR848_23470 PF12320 Type 5 capsule protein repressor C-terminal domain FR848_23470 PF00149 Calcineurin-like phosphoesterase FR848_23475 PF13476 AAA domain FR848_23485 PF00480 ROK family FR848_23490 PF04381 Putative exonuclease, RdgC FR848_23495 PF06865 Pyrimidine/purine nucleoside phosphorylase FR848_23500 PF07302 AroM protein FR848_23505 PF16362 YaiA protein FR848_23510 PF01202 Shikimate kinase FR848_23515 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) FR848_23520 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FR848_23525 PF14748 Pyrroline-5-carboxylate reductase dimerisation FR848_23525 PF03807 NADP oxidoreductase coenzyme F420-dependent FR848_23530 PF07769 psiF repeat FR848_23535 PF00245 Alkaline phosphatase FR848_23540 PF10796 Sigma-S stabilisation anti-adaptor protein FR848_23545 PF00356 Bacterial regulatory proteins, lacI family FR848_23555 PF00106 short chain dehydrogenase FR848_23560 PF07690 Major Facilitator Superfamily FR848_23570 PF01820 D-ala D-ala ligase N-terminus FR848_23570 PF07478 D-ala D-ala ligase C-terminus FR848_23575 PF10953 Protein of unknown function (DUF2754) FR848_23580 PF10954 Protein of unknown function (DUF2755) FR848_23585 PF07759 Protein of unknown function (DUF1615) FR848_23590 PF05992 SbmA/BacA-like family FR848_23600 PF00144 Beta-lactamase FR848_23605 PF00490 Delta-aminolevulinic acid dehydratase FR848_23620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FR848_23625 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FR848_23640 PF00072 Response regulator receiver domain FR848_23640 PF00196 Bacterial regulatory proteins, luxR family FR848_23645 PF05231 MASE1 FR848_23645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_23645 PF07730 Histidine kinase FR848_23650 PF07690 Major Facilitator Superfamily FR848_23660 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23665 PF08402 TOBE domain FR848_23665 PF00005 ABC transporter FR848_23670 PF02574 Homocysteine S-methyltransferase FR848_23675 PF00324 Amino acid permease FR848_23680 PF00295 Glycosyl hydrolases family 28 FR848_23685 PF00324 Amino acid permease FR848_23690 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FR848_23695 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FR848_23705 PF13458 Periplasmic binding protein FR848_23710 PF02653 Branched-chain amino acid transport system / permease component FR848_23715 PF11862 Domain of unknown function (DUF3382) FR848_23715 PF02653 Branched-chain amino acid transport system / permease component FR848_23720 PF12399 Branched-chain amino acid ATP-binding cassette transporter FR848_23720 PF00005 ABC transporter FR848_23725 PF00005 ABC transporter FR848_23735 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_23740 PF00005 ABC transporter FR848_23745 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23750 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23765 PF16967 E-set like domain FR848_23765 PF15976 CS1-pili formation C-terminal FR848_23770 PF18649 EcpB C-terminal domain FR848_23775 PF16449 Fimbrillin MatB FR848_23780 PF00196 Bacterial regulatory proteins, luxR family FR848_23785 PF00005 ABC transporter FR848_23795 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23800 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23820 PF00085 Thioredoxin FR848_23825 PF00005 ABC transporter FR848_23830 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23835 PF09084 NMT1/THI5 like FR848_23840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_23840 PF03466 LysR substrate binding domain FR848_23845 PF00877 NlpC/P60 family FR848_23850 PF00267 Gram-negative porin FR848_23855 PF00696 Amino acid kinase family FR848_23855 PF01472 PUA domain FR848_23860 PF00171 Aldehyde dehydrogenase family FR848_23900 PF02796 Helix-turn-helix domain of resolvase FR848_23900 PF00239 Resolvase, N terminal domain FR848_23915 PF01381 Helix-turn-helix FR848_23945 PF07690 Major Facilitator Superfamily FR848_23955 PF01979 Amidohydrolase family FR848_23960 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FR848_23965 PF17392 Urocanase C-terminal domain FR848_23965 PF01175 Urocanase Rossmann-like domain FR848_23965 PF17391 Urocanase N-terminal domain FR848_23970 PF00005 ABC transporter FR848_23970 PF00571 CBS domain FR848_23975 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23980 PF00528 Binding-protein-dependent transport system inner membrane component FR848_23990 PF00221 Aromatic amino acid lyase FR848_23995 PF05962 HutD FR848_24000 PF07702 UTRA domain FR848_24000 PF00392 Bacterial regulatory proteins, gntR family FR848_24010 PF03605 Anaerobic c4-dicarboxylate membrane transporter FR848_24015 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_24020 PF00701 Dihydrodipicolinate synthetase family FR848_24025 PF00356 Bacterial regulatory proteins, lacI family FR848_24030 PF07690 Major Facilitator Superfamily FR848_24035 PF04966 Carbohydrate-selective porin, OprB family FR848_24040 PF13847 Methyltransferase domain FR848_24045 PF00583 Acetyltransferase (GNAT) family FR848_24050 PF09857 Putative toxin of bacterial toxin-antitoxin pair FR848_24055 PF03786 D-mannonate dehydratase (UxuA) FR848_24060 PF01232 Mannitol dehydrogenase Rossmann domain FR848_24060 PF08125 Mannitol dehydrogenase C-terminal domain FR848_24065 PF00392 Bacterial regulatory proteins, gntR family FR848_24065 PF07729 FCD domain FR848_24075 PF00593 TonB dependent receptor FR848_24075 PF07715 TonB-dependent Receptor Plug Domain FR848_24085 PF00171 Aldehyde dehydrogenase family FR848_24090 PF02397 Bacterial sugar transferase FR848_24100 PF02563 Polysaccharide biosynthesis/export protein FR848_24120 PF00535 Glycosyl transferase family 2 FR848_24125 PF00534 Glycosyl transferases group 1 FR848_24125 PF13439 Glycosyltransferase Family 4 FR848_24130 PF00534 Glycosyl transferases group 1 FR848_24130 PF13439 Glycosyltransferase Family 4 FR848_24145 PF06426 Serine acetyltransferase, N-terminal FR848_24145 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_24150 PF07417 Sigma factor-binding transcriptional regulator Crl FR848_24160 PF00156 Phosphoribosyl transferase domain FR848_24165 PF01546 Peptidase family M20/M25/M40 FR848_24165 PF07687 Peptidase dimerisation domain FR848_24170 PF13673 Acetyltransferase (GNAT) domain FR848_24175 PF11798 IMS family HHH motif FR848_24175 PF11799 impB/mucB/samB family C-terminal domain FR848_24175 PF00817 impB/mucB/samB family FR848_24180 PF03009 Glycerophosphoryl diester phosphodiesterase family FR848_24185 PF04400 (Na+)-NQR maturation NqrM FR848_24190 PF00175 Oxidoreductase NAD-binding domain FR848_24190 PF00970 Oxidoreductase FAD-binding domain FR848_24190 PF00111 2Fe-2S iron-sulfur cluster binding domain FR848_24195 PF02508 Rnf-Nqr subunit, membrane protein FR848_24200 PF02508 Rnf-Nqr subunit, membrane protein FR848_24205 PF04205 FMN-binding domain FR848_24210 PF03116 NQR2, RnfD, RnfE family FR848_24215 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FR848_24215 PF11973 NQRA C-terminal domain FR848_24220 PF03734 L,D-transpeptidase catalytic domain FR848_24225 PF13230 Glutamine amidotransferases class-II FR848_24230 PF13580 SIS domain FR848_24235 PF09317 Domain of unknown function (DUF1974) FR848_24235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR848_24235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR848_24235 PF02770 Acyl-CoA dehydrogenase, middle domain FR848_24240 PF00795 Carbon-nitrogen hydrolase FR848_24250 PF00929 Exonuclease FR848_24255 PF00075 RNase H FR848_24260 PF08241 Methyltransferase domain FR848_24265 PF16123 Hydroxyacylglutathione hydrolase C-terminus FR848_24265 PF00753 Metallo-beta-lactamase superfamily FR848_24270 PF01476 LysM domain FR848_24270 PF01464 Transglycosylase SLT domain FR848_24275 PF08241 Methyltransferase domain FR848_24280 PF03372 Endonuclease/Exonuclease/phosphatase family FR848_24285 PF07690 Major Facilitator Superfamily FR848_24290 PF03466 LysR substrate binding domain FR848_24290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_24295 PF00248 Aldo/keto reductase family FR848_24335 PF09383 NIL domain FR848_24335 PF00005 ABC transporter FR848_24340 PF00528 Binding-protein-dependent transport system inner membrane component FR848_24345 PF03180 NLPA lipoprotein FR848_24350 PF16358 RcsF lipoprotein FR848_24355 PF01980 tRNA-methyltransferase O FR848_24355 PF18389 TrmO C-terminal domain FR848_24360 PF03129 Anticodon binding domain FR848_24360 PF04073 Aminoacyl-tRNA editing domain FR848_24360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FR848_24365 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FR848_24370 PF17185 NlpE C-terminal OB domain FR848_24370 PF04170 NlpE N-terminal domain FR848_24375 PF00472 RF-1 domain FR848_24380 PF07152 YaeQ protein FR848_24385 PF06786 Uncharacterised protein family (UPF0253) FR848_24390 PF07073 Modulator of Rho-dependent transcription termination (ROF) FR848_24395 PF01171 PP-loop family FR848_24395 PF09179 TilS substrate binding domain FR848_24395 PF11734 TilS substrate C-terminal domain FR848_24400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR848_24415 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FR848_24420 PF01336 OB-fold nucleic acid binding domain FR848_24420 PF07733 Bacterial DNA polymerase III alpha NTPase domain FR848_24420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FR848_24420 PF14579 Helix-hairpin-helix motif FR848_24420 PF02811 PHP domain FR848_24425 PF01351 Ribonuclease HII FR848_24430 PF02684 Lipid-A-disaccharide synthetase FR848_24435 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_24435 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FR848_24440 PF07977 FabA-like domain FR848_24445 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FR848_24445 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_24450 PF03938 Outer membrane protein (OmpH-like) FR848_24455 PF01103 Surface antigen FR848_24455 PF07244 Surface antigen variable number repeat FR848_24460 PF02163 Peptidase family M50 FR848_24460 PF17820 PDZ domain FR848_24470 PF01255 Putative undecaprenyl diphosphate synthase FR848_24480 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FR848_24480 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FR848_24480 PF13288 DXP reductoisomerase C-terminal domain FR848_24485 PF01765 Ribosome recycling factor FR848_24490 PF00696 Amino acid kinase family FR848_24495 PF00889 Elongation factor TS FR848_24500 PF00318 Ribosomal protein S2 FR848_24505 PF00557 Metallopeptidase family M24 FR848_24510 PF01909 Nucleotidyltransferase domain FR848_24510 PF01842 ACT domain FR848_24510 PF01966 HD domain FR848_24510 PF08335 GlnD PII-uridylyltransferase FR848_24515 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_24515 PF14602 Hexapeptide repeat of succinyl-transferase FR848_24515 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FR848_24520 PF11944 Protein of unknown function (DUF3461) FR848_24530 PF05651 Putative sugar diacid recognition FR848_24530 PF13556 PucR C-terminal helix-turn-helix domain FR848_24530 PF17853 GGDEF-like domain FR848_24535 PF00595 PDZ domain FR848_24540 PF01966 HD domain FR848_24540 PF13286 Phosphohydrolase-associated domain FR848_24545 PF01048 Phosphorylase superfamily FR848_24550 PF01497 Periplasmic binding protein FR848_24555 PF03458 UPF0126 domain FR848_24560 PF01521 Iron-sulphur cluster biosynthesis FR848_24565 PF00654 Voltage gated chloride channel FR848_24570 PF00202 Aminotransferase class-III FR848_24575 PF04754 Putative transposase, YhgA-like FR848_24580 PF01032 FecCD transport family FR848_24585 PF01497 Periplasmic binding protein FR848_24590 PF00005 ABC transporter FR848_24595 PF00593 TonB dependent receptor FR848_24595 PF07715 TonB-dependent Receptor Plug Domain FR848_24600 PF00905 Penicillin binding protein transpeptidase domain FR848_24600 PF14814 Bifunctional transglycosylase second domain FR848_24600 PF00912 Transglycosylase FR848_24600 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal FR848_24605 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FR848_24610 PF16537 Type II secretion system protein B FR848_24615 PF18494 Pullulanase Ins domain FR848_24615 PF17967 Pullulanase N2 domain FR848_24615 PF11852 Domain of unknown function (DUF3372) FR848_24615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR848_24615 PF03714 Bacterial pullanase-associated domain FR848_24620 PF11356 Type II secretion system protein C FR848_24625 PF03958 Bacterial type II/III secretion system short domain FR848_24625 PF00263 Bacterial type II and III secretion system protein FR848_24630 PF00437 Type II/IV secretion system protein FR848_24635 PF00482 Type II secretion system (T2SS), protein F FR848_24640 PF08334 Type II secretion system (T2SS), protein G FR848_24640 PF07963 Prokaryotic N-terminal methylation motif FR848_24645 PF07963 Prokaryotic N-terminal methylation motif FR848_24650 PF02501 Type II secretion system (T2SS), protein I FR848_24650 PF07963 Prokaryotic N-terminal methylation motif FR848_24655 PF11612 Type II secretion system (T2SS), protein J FR848_24655 PF07963 Prokaryotic N-terminal methylation motif FR848_24660 PF03934 Type II secretion system (T2SS), protein K FR848_24665 PF12693 GspL periplasmic domain FR848_24665 PF05134 Type II secretion system (T2SS), protein L FR848_24670 PF04612 Type II secretion system (T2SS), protein M FR848_24675 PF01203 Type II secretion system (T2SS), protein N FR848_24680 PF01478 Type IV leader peptidase family FR848_24680 PF06750 Bacterial Peptidase A24 N-terminal domain FR848_24685 PF08482 ATP-dependent helicase C-terminal FR848_24685 PF04408 Helicase associated domain (HA2) FR848_24685 PF00270 DEAD/DEAH box helicase FR848_24685 PF00271 Helicase conserved C-terminal domain FR848_24690 PF02834 LigT like Phosphoesterase FR848_24695 PF03749 Sugar fermentation stimulation protein RE domain FR848_24695 PF17746 SfsA N-terminal OB domain FR848_24700 PF01258 Prokaryotic dksA/traR C4-type zinc finger FR848_24705 PF00749 tRNA synthetases class I (E and Q), catalytic domain FR848_24710 PF01743 Poly A polymerase head domain FR848_24710 PF12626 Polymerase A arginine-rich C-terminus FR848_24710 PF12627 Probable RNA and SrmB- binding site of polymerase A FR848_24715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FR848_24720 PF02548 Ketopantoate hydroxymethyltransferase FR848_24725 PF02569 Pantoate-beta-alanine ligase FR848_24730 PF02261 Aspartate decarboxylase FR848_24735 PF16970 Type-1 fimbrial protein, A FR848_24740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_24740 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_24745 PF13954 PapC N-terminal domain FR848_24745 PF00577 Outer membrane usher protein FR848_24745 PF13953 PapC C-terminal domain FR848_24770 PF01522 Polysaccharide deacetylase FR848_24775 PF03610 PTS system fructose IIA component FR848_24780 PF01061 ABC-2 type transporter FR848_24785 PF00005 ABC transporter FR848_24790 PF00484 Carbonic anhydrase FR848_24795 PF00156 Phosphoribosyl transferase domain FR848_24800 PF01011 PQQ enzyme repeat FR848_24805 PF00394 Multicopper oxidase FR848_24805 PF07731 Multicopper oxidase FR848_24805 PF07732 Multicopper oxidase FR848_24810 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FR848_24820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FR848_24820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR848_24825 PF17284 Spermidine synthase tetramerisation domain FR848_24830 PF02675 S-adenosylmethionine decarboxylase FR848_24835 PF00455 DeoR C terminal sensor domain FR848_24835 PF08220 DeoR-like helix-turn-helix domain FR848_24840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FR848_24845 PF07005 Sugar-binding N-terminal domain FR848_24845 PF17042 Nucleotide-binding C-terminal domain FR848_24850 PF03812 2-keto-3-deoxygluconate permease FR848_24855 PF06062 Uncharacterised protein family (UPF0231) FR848_24860 PF00330 Aconitase family (aconitate hydratase) FR848_24860 PF11791 Aconitate B N-terminal domain FR848_24860 PF06434 Aconitate hydratase 2 N-terminus FR848_24865 PF11737 Protein of unknown function (DUF3300) FR848_24880 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_24880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR848_24885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FR848_24885 PF00364 Biotin-requiring enzyme FR848_24885 PF02817 e3 binding domain FR848_24890 PF00456 Transketolase, thiamine diphosphate binding domain FR848_24890 PF17831 Pyruvate dehydrogenase E1 component middle domain FR848_24895 PF00392 Bacterial regulatory proteins, gntR family FR848_24895 PF07729 FCD domain FR848_24905 PF00324 Amino acid permease FR848_24915 PF04616 Glycosyl hydrolases family 43 FR848_24915 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain FR848_24920 PF17113 Regulatory signalling modulator protein AmpE FR848_24925 PF01510 N-acetylmuramoyl-L-alanine amidase FR848_24930 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FR848_24930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FR848_24935 PF07963 Prokaryotic N-terminal methylation motif FR848_24940 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FR848_24940 PF00437 Type II/IV secretion system protein FR848_24945 PF00482 Type II secretion system (T2SS), protein F FR848_24950 PF00478 IMP dehydrogenase / GMP reductase domain FR848_24955 PF01121 Dephospho-CoA kinase FR848_24960 PF07072 Cell division protein FR848_24965 PF03884 DNA gyrase inhibitor YacG FR848_24970 PF00293 NUDIX domain FR848_24975 PF07516 SecA Wing and Scaffold domain FR848_24975 PF02810 SEC-C motif FR848_24975 PF01043 SecA preprotein cross-linking domain FR848_24975 PF07517 SecA DEAD-like domain FR848_24980 PF06558 Secretion monitor precursor protein (SecM) FR848_24985 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FR848_24990 PF12327 FtsZ family, C-terminal domain FR848_24990 PF00091 Tubulin/FtsZ family, GTPase domain FR848_24995 PF02491 SHS2 domain inserted in FTSA FR848_25000 PF03799 Cell division protein FtsQ FR848_25000 PF08478 POTRA domain, FtsQ-type FR848_25005 PF07478 D-ala D-ala ligase C-terminus FR848_25005 PF01820 D-ala D-ala ligase N-terminus FR848_25010 PF08245 Mur ligase middle domain FR848_25010 PF01225 Mur ligase family, catalytic domain FR848_25010 PF02875 Mur ligase family, glutamate ligase domain FR848_25015 PF04101 Glycosyltransferase family 28 C-terminal domain FR848_25015 PF03033 Glycosyltransferase family 28 N-terminal domain FR848_25020 PF01098 Cell cycle protein FR848_25025 PF08245 Mur ligase middle domain FR848_25025 PF02875 Mur ligase family, glutamate ligase domain FR848_25030 PF00953 Glycosyl transferase family 4 FR848_25030 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FR848_25035 PF08245 Mur ligase middle domain FR848_25035 PF02875 Mur ligase family, glutamate ligase domain FR848_25035 PF01225 Mur ligase family, catalytic domain FR848_25040 PF02875 Mur ligase family, glutamate ligase domain FR848_25040 PF08245 Mur ligase middle domain FR848_25040 PF01225 Mur ligase family, catalytic domain FR848_25045 PF03717 Penicillin-binding Protein dimerisation domain FR848_25045 PF00905 Penicillin binding protein transpeptidase domain FR848_25050 PF04999 Cell division protein FtsL FR848_25055 PF01795 MraW methylase family FR848_25060 PF02381 MraZ protein, putative antitoxin-like FR848_25065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR848_25065 PF00356 Bacterial regulatory proteins, lacI family FR848_25070 PF10369 Small subunit of acetolactate synthase FR848_25075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_25075 PF00205 Thiamine pyrophosphate enzyme, central domain FR848_25075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_25080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_25080 PF03466 LysR substrate binding domain FR848_25090 PF08502 LeuA allosteric (dimerisation) domain FR848_25090 PF00682 HMGL-like FR848_25095 PF00180 Isocitrate/isopropylmalate dehydrogenase FR848_25100 PF00330 Aconitase family (aconitate hydratase) FR848_25105 PF00694 Aconitase C-terminal domain FR848_25110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR848_25110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_25115 PF08501 Shikimate dehydrogenase substrate binding domain FR848_25115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FR848_25120 PF07690 Major Facilitator Superfamily FR848_25125 PF01487 Type I 3-dehydroquinase FR848_25130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_25130 PF03466 LysR substrate binding domain FR848_25135 PF07690 Major Facilitator Superfamily FR848_25140 PF07690 Major Facilitator Superfamily FR848_25155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_25155 PF12793 Sugar transport-related sRNA regulator N-term FR848_25165 PF00528 Binding-protein-dependent transport system inner membrane component FR848_25170 PF00005 ABC transporter FR848_25175 PF09335 SNARE associated Golgi protein FR848_25180 PF12833 Helix-turn-helix domain FR848_25180 PF02311 AraC-like ligand binding domain FR848_25185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR848_25190 PF11762 L-arabinose isomerase C-terminal domain FR848_25190 PF02610 L-arabinose isomerase FR848_25195 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_25200 PF00136 DNA polymerase family B FR848_25200 PF03104 DNA polymerase family B, exonuclease domain FR848_25205 PF12137 RNA polymerase recycling family C-terminal FR848_25205 PF00176 SNF2 family N-terminal domain FR848_25205 PF00271 Helicase conserved C-terminal domain FR848_25205 PF18337 RapA N-terminal Tudor like domain FR848_25205 PF18339 RapA N-terminal Tudor like domain 1 FR848_25210 PF00849 RNA pseudouridylate synthase FR848_25215 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FR848_25220 PF03390 2-hydroxycarboxylate transporter family FR848_25225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_25225 PF17203 Single cache domain 3 FR848_25230 PF00072 Response regulator receiver domain FR848_25230 PF12431 Transcriptional regulator FR848_25235 PF00226 DnaJ domain FR848_25235 PF05099 Tellurite resistance protein TerB FR848_25240 PF03968 OstA-like protein FR848_25240 PF04453 LPS transport system D FR848_25245 PF09312 SurA N-terminal domain FR848_25245 PF00639 PPIC-type PPIASE domain FR848_25250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FR848_25255 PF00398 Ribosomal RNA adenine dimethylase FR848_25260 PF04379 ApaG domain FR848_25265 PF00149 Calcineurin-like phosphoesterase FR848_25270 PF00186 Dihydrofolate reductase FR848_25275 PF02254 TrkA-N domain FR848_25275 PF00999 Sodium/hydrogen exchanger family FR848_25280 PF02525 Flavodoxin-like fold FR848_25285 PF06004 Bacterial protein of unknown function (DUF903) FR848_25290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FR848_25290 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FR848_25290 PF02142 MGS-like domain FR848_25295 PF00117 Glutamine amidotransferase class-I FR848_25295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FR848_25300 PF01113 Dihydrodipicolinate reductase, N-terminus FR848_25300 PF05173 Dihydrodipicolinate reductase, C-terminus FR848_25305 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FR848_25310 PF04223 Citrate lyase, alpha subunit (CitF) FR848_25315 PF03328 HpcH/HpaI aldolase/citrate lyase family FR848_25320 PF06857 Malonate decarboxylase delta subunit (MdcD) FR848_25325 PF00583 Acetyltransferase (GNAT) family FR848_25325 PF08218 Citrate lyase ligase C-terminal domain FR848_25330 PF03390 2-hydroxycarboxylate transporter family FR848_25335 PF04277 Oxaloacetate decarboxylase, gamma chain FR848_25340 PF00682 HMGL-like FR848_25340 PF00364 Biotin-requiring enzyme FR848_25340 PF02436 Conserved carboxylase domain FR848_25345 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FR848_25350 PF17203 Single cache domain 3 FR848_25350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_25355 PF00072 Response regulator receiver domain FR848_25355 PF12431 Transcriptional regulator FR848_25360 PF02272 DHHA1 domain FR848_25360 PF01411 tRNA synthetases class II (A) FR848_25360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FR848_25365 PF03466 LysR substrate binding domain FR848_25365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_25370 PF00694 Aconitase C-terminal domain FR848_25370 PF00330 Aconitase family (aconitate hydratase) FR848_25375 PF00939 Sodium:sulfate symporter transmembrane region FR848_25380 PF00939 Sodium:sulfate symporter transmembrane region FR848_25385 PF04303 PrpF protein FR848_25390 PF03466 LysR substrate binding domain FR848_25390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_25395 PF01156 Inosine-uridine preferring nucleoside hydrolase FR848_25400 PF02401 LytB protein FR848_25405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR848_25410 PF01252 Signal peptidase (SPase) II FR848_25415 PF00133 tRNA synthetases class I (I, L, M and V) FR848_25415 PF08264 Anticodon-binding domain of tRNA FR848_25415 PF06827 Zinc finger found in FPG and IleRS FR848_25420 PF01687 Riboflavin kinase FR848_25420 PF06574 FAD synthetase FR848_25435 PF01649 Ribosomal protein S20 FR848_25440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_25440 PF03466 LysR substrate binding domain FR848_25445 PF06965 Na+/H+ antiporter 1 FR848_25450 PF15977 Winged helix-turn-helix DNA binding FR848_25460 PF00704 Glycosyl hydrolases family 18 FR848_25480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_25480 PF03466 LysR substrate binding domain FR848_25485 PF00226 DnaJ domain FR848_25485 PF00684 DnaJ central domain FR848_25485 PF01556 DnaJ C terminal domain FR848_25490 PF00012 Hsp70 protein FR848_25495 PF10807 Protein of unknown function (DUF2541) FR848_25500 PF13099 Domain of unknown function (DUF3944) FR848_25500 PF03981 Ubiquinol-cytochrome C chaperone FR848_25505 PF01184 GPR1/FUN34/yaaH family FR848_25510 PF07690 Major Facilitator Superfamily FR848_25515 PF00994 Probable molybdopterin binding domain FR848_25520 PF00923 Transaldolase/Fructose-6-phosphate aldolase FR848_25525 PF01235 Sodium:alanine symporter family FR848_25530 PF03883 Peroxide stress protein YaaA FR848_25535 PF14821 Threonine synthase N terminus FR848_25535 PF00291 Pyridoxal-phosphate dependent enzyme FR848_25540 PF08544 GHMP kinases C terminal FR848_25540 PF00288 GHMP kinases N terminal domain FR848_25545 PF13840 ACT domain FR848_25545 PF01842 ACT domain FR848_25545 PF00696 Amino acid kinase family FR848_25545 PF03447 Homoserine dehydrogenase, NAD binding domain FR848_25545 PF00742 Homoserine dehydrogenase FR848_25550 PF08254 Threonine leader peptide FR848_25555 PF00588 SpoU rRNA Methylase family FR848_25565 PF00486 Transcriptional regulatory protein, C terminal FR848_25565 PF00072 Response regulator receiver domain FR848_25570 PF06123 Inner membrane protein CreD FR848_25575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_25575 PF00512 His Kinase A (phospho-acceptor) domain FR848_25575 PF00672 HAMP domain FR848_25580 PF00486 Transcriptional regulatory protein, C terminal FR848_25580 PF00072 Response regulator receiver domain FR848_25585 PF05981 CreA protein FR848_25590 PF12833 Helix-turn-helix domain FR848_25590 PF06445 GyrI-like small molecule binding domain FR848_25595 PF00300 Histidine phosphatase superfamily (branch 1) FR848_25600 PF01931 Protein of unknown function DUF84 FR848_25605 PF01371 Trp repressor protein FR848_25610 PF14718 Soluble lytic murein transglycosylase L domain FR848_25610 PF01464 Transglycosylase SLT domain FR848_25615 PF00005 ABC transporter FR848_25615 PF12848 ABC transporter FR848_25620 PF01381 Helix-turn-helix FR848_25620 PF13521 AAA domain FR848_25625 PF18073 Rubredoxin metal binding domain FR848_25630 PF18429 Domain of unknown function (DUF5609) FR848_25635 PF10144 Bacterial virulence factor haemolysin FR848_25640 PF10437 Bacterial lipoate protein ligase C-terminus FR848_25640 PF03099 Biotin/lipoate A/B protein ligase family FR848_25645 PF01048 Phosphorylase superfamily FR848_25650 PF01676 Metalloenzyme superfamily FR848_25655 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FR848_25655 PF02885 Glycosyl transferase family, helical bundle domain FR848_25655 PF00591 Glycosyl transferase family, a/b domain FR848_25660 PF01791 DeoC/LacD family aldolase FR848_25665 PF01773 Na+ dependent nucleoside transporter N-terminus FR848_25665 PF07662 Na+ dependent nucleoside transporter C-terminus FR848_25665 PF07670 Nucleoside recognition FR848_25670 PF01026 TatD related DNase FR848_25675 PF01734 Patatin-like phospholipase FR848_25680 PF07043 Protein of unknown function (DUF1328) FR848_25685 PF04972 BON domain FR848_25690 PF03144 Elongation factor Tu domain 2 FR848_25690 PF00009 Elongation factor Tu GTP binding domain FR848_25690 PF16658 Class II release factor RF3, C-terminal domain FR848_25695 PF13419 Haloacid dehalogenase-like hydrolase FR848_25700 PF00583 Acetyltransferase (GNAT) family FR848_25705 PF03603 DNA polymerase III psi subunit FR848_25710 PF08468 Methyltransferase small domain N-terminal FR848_25710 PF05175 Methyltransferase small domain FR848_25730 PF07256 Protein of unknown function (DUF1435) FR848_25735 PF00990 Diguanylate cyclase, GGDEF domain FR848_25740 PF11575 FhuF 2Fe-2S C-terminal domain FR848_25740 PF06276 Ferric iron reductase FhuF-like transporter FR848_25745 PF02378 Phosphotransferase system, EIIC FR848_25750 PF04073 Aminoacyl-tRNA editing domain FR848_25755 PF00196 Bacterial regulatory proteins, luxR family FR848_25760 PF00196 Bacterial regulatory proteins, luxR family FR848_25765 PF02311 AraC-like ligand binding domain FR848_25765 PF12833 Helix-turn-helix domain FR848_25770 PF01494 FAD binding domain FR848_25775 PF06738 Putative threonine/serine exporter FR848_25780 PF12821 Threonine/Serine exporter, ThrE FR848_25785 PF17948 DnaT DNA-binding domain FR848_25790 PF01695 IstB-like ATP binding protein FR848_25795 PF10696 Protein of unknown function (DUF2501) FR848_25805 PF04754 Putative transposase, YhgA-like FR848_25810 PF01380 SIS domain FR848_25815 PF01380 SIS domain FR848_25820 PF03613 PTS system mannose/fructose/sorbose family IID component FR848_25825 PF03609 PTS system sorbose-specific iic component FR848_25830 PF03830 PTS system sorbose subfamily IIB component FR848_25830 PF03610 PTS system fructose IIA component FR848_25835 PF03610 PTS system fructose IIA component FR848_25835 PF03830 PTS system sorbose subfamily IIB component FR848_25840 PF00158 Sigma-54 interaction domain FR848_25840 PF00874 PRD domain FR848_25840 PF03610 PTS system fructose IIA component FR848_25845 PF01232 Mannitol dehydrogenase Rossmann domain FR848_25845 PF08125 Mannitol dehydrogenase C-terminal domain FR848_25850 PF08240 Alcohol dehydrogenase GroES-like domain FR848_25850 PF00107 Zinc-binding dehydrogenase FR848_25855 PF07729 FCD domain FR848_25855 PF00392 Bacterial regulatory proteins, gntR family FR848_25860 PF07690 Major Facilitator Superfamily FR848_25865 PF00583 Acetyltransferase (GNAT) family FR848_25870 PF00583 Acetyltransferase (GNAT) family FR848_25875 PF01380 SIS domain FR848_25875 PF01418 Helix-turn-helix domain, rpiR family FR848_25880 PF01081 KDPG and KHG aldolase FR848_25885 PF05035 2-keto-3-deoxy-galactonokinase FR848_25890 PF00474 Sodium:solute symporter family FR848_25900 PF07969 Amidohydrolase family FR848_25905 PF01168 Alanine racemase, N-terminal domain FR848_25910 PF01047 MarR family FR848_25915 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_25920 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_25925 PF00171 Aldehyde dehydrogenase family FR848_25930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FR848_25935 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase FR848_25940 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR848_25945 PF03328 HpcH/HpaI aldolase/citrate lyase family FR848_25950 PF07690 Major Facilitator Superfamily FR848_25955 PF12833 Helix-turn-helix domain FR848_25960 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FR848_25960 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FR848_25965 PF01613 Flavin reductase like domain FR848_25970 PF13722 5TM C-terminal transporter carbon starvation CstA FR848_25970 PF02554 Carbon starvation protein CstA FR848_25975 PF04328 Selenoprotein, putative FR848_25980 PF02492 CobW/HypB/UreG, nucleotide-binding domain FR848_25980 PF07683 Cobalamin synthesis protein cobW C-terminal domain FR848_25995 PF00171 Aldehyde dehydrogenase family FR848_26005 PF02311 AraC-like ligand binding domain FR848_26005 PF12833 Helix-turn-helix domain FR848_26010 PF01810 LysE type translocator FR848_26020 PF04286 Protein of unknown function (DUF445) FR848_26025 PF07690 Major Facilitator Superfamily FR848_26030 PF02195 ParB-like nuclease domain FR848_26035 PF01507 Phosphoadenosine phosphosulfate reductase family FR848_26035 PF11922 Domain of unknown function (DUF3440) FR848_26045 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FR848_26050 PF01869 BadF/BadG/BcrA/BcrD ATPase family FR848_26055 PF11823 Protein of unknown function (DUF3343) FR848_26060 PF07687 Peptidase dimerisation domain FR848_26060 PF01546 Peptidase family M20/M25/M40 FR848_26065 PF07670 Nucleoside recognition FR848_26070 PF07670 Nucleoside recognition FR848_26075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_26075 PF03466 LysR substrate binding domain FR848_26085 PF00529 HlyD membrane-fusion protein of T1SS FR848_26085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_26095 PF06568 Domain of unknown function (DUF1127) FR848_26100 PF00392 Bacterial regulatory proteins, gntR family FR848_26100 PF00155 Aminotransferase class I and II FR848_26110 PF00271 Helicase conserved C-terminal domain FR848_26110 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FR848_26110 PF04851 Type III restriction enzyme, res subunit FR848_26110 PF08463 EcoEI R protein C-terminal FR848_26115 PF02384 N-6 DNA Methylase FR848_26115 PF12161 HsdM N-terminal domain FR848_26125 PF08845 Toxin SymE, type I toxin-antitoxin system FR848_26130 PF03069 Acetamidase/Formamidase family FR848_26135 PF00324 Amino acid permease FR848_26150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR848_26155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_26155 PF03466 LysR substrate binding domain FR848_26160 PF02525 Flavodoxin-like fold FR848_26180 PF00936 BMC domain FR848_26185 PF00936 BMC domain FR848_26190 PF00936 BMC domain FR848_26195 PF00171 Aldehyde dehydrogenase family FR848_26195 PF00465 Iron-containing alcohol dehydrogenase FR848_26205 PF00465 Iron-containing alcohol dehydrogenase FR848_26210 PF02901 Pyruvate formate lyase-like FR848_26210 PF01228 Glycine radical FR848_26215 PF04055 Radical SAM superfamily FR848_26215 PF13187 4Fe-4S dicluster domain FR848_26220 PF00936 BMC domain FR848_26225 PF06130 Phosphate propanoyltransferase FR848_26235 PF00893 Small Multidrug Resistance protein FR848_26240 PF00893 Small Multidrug Resistance protein FR848_26250 PF01212 Beta-eliminating lyase FR848_26255 PF03222 Tryptophan/tyrosine permease family FR848_26260 PF00579 tRNA synthetases class I (W and Y) FR848_26265 PF00990 Diguanylate cyclase, GGDEF domain FR848_26270 PF13533 Biotin-lipoyl like FR848_26275 PF00005 ABC transporter FR848_26310 PF08007 Cupin superfamily protein FR848_26315 PF01975 Survival protein SurE FR848_26330 PF07690 Major Facilitator Superfamily FR848_26330 PF00083 Sugar (and other) transporter FR848_26340 PF00083 Sugar (and other) transporter FR848_26345 PF13378 Enolase C-terminal domain-like FR848_26345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR848_26355 PF00701 Dihydrodipicolinate synthetase family FR848_26365 PF00356 Bacterial regulatory proteins, lacI family FR848_26365 PF13407 Periplasmic binding protein domain FR848_26375 PF01223 DNA/RNA non-specific endonuclease FR848_26380 PF08845 Toxin SymE, type I toxin-antitoxin system FR848_26395 PF04471 Restriction endonuclease FR848_26395 PF14338 Mrr N-terminal domain FR848_26410 PF00535 Glycosyl transferase family 2 FR848_26425 PF06755 CbtA_toxin of type IV toxin-antitoxin system FR848_26430 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FR848_26435 PF06174 Protein of unknown function (DUF987) FR848_26440 PF04002 RadC-like JAB domain FR848_26445 PF03230 Antirestriction protein FR848_26450 PF06067 Domain of unknown function (DUF932) FR848_26475 PF03981 Ubiquinol-cytochrome C chaperone FR848_26475 PF13099 Domain of unknown function (DUF3944) FR848_26480 PF13148 Protein of unknown function (DUF3987) FR848_26500 PF12161 HsdM N-terminal domain FR848_26500 PF02384 N-6 DNA Methylase FR848_26520 PF12008 Type I restriction and modification enzyme - subunit R C terminal FR848_26520 PF18766 SWI2/SNF2 ATPase FR848_26520 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FR848_26530 PF13356 Arm DNA-binding domain FR848_26530 PF00589 Phage integrase family FR848_26550 PF00107 Zinc-binding dehydrogenase FR848_26550 PF08240 Alcohol dehydrogenase GroES-like domain FR848_26560 PF00528 Binding-protein-dependent transport system inner membrane component FR848_26565 PF00149 Calcineurin-like phosphoesterase FR848_26570 PF00005 ABC transporter FR848_26570 PF17912 MalK OB fold domain FR848_26575 PF13416 Bacterial extracellular solute-binding protein FR848_26580 PF00083 Sugar (and other) transporter FR848_26585 PF01261 Xylose isomerase-like TIM barrel FR848_26590 PF01261 Xylose isomerase-like TIM barrel FR848_26595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR848_26595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR848_26600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR848_26600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR848_26600 PF00205 Thiamine pyrophosphate enzyme, central domain FR848_26605 PF00294 pfkB family carbohydrate kinase FR848_26610 PF02685 Glucokinase FR848_26610 PF01418 Helix-turn-helix domain, rpiR family FR848_26610 PF01380 SIS domain FR848_26615 PF04962 KduI/IolB family FR848_26620 PF00171 Aldehyde dehydrogenase family FR848_26630 PF05872 Bacterial protein of unknown function (DUF853) FR848_26635 PF03739 Lipopolysaccharide export system permease LptF/LptG FR848_26640 PF03739 Lipopolysaccharide export system permease LptF/LptG FR848_26645 PF02789 Cytosol aminopeptidase family, N-terminal domain FR848_26645 PF00883 Cytosol aminopeptidase family, catalytic domain FR848_26650 PF04364 DNA polymerase III chi subunit, HolC FR848_26655 PF00133 tRNA synthetases class I (I, L, M and V) FR848_26655 PF08264 Anticodon-binding domain of tRNA FR848_26655 PF10458 Valyl tRNA synthetase tRNA binding arm FR848_26660 PF00583 Acetyltransferase (GNAT) family FR848_26670 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FR848_26675 PF06877 Regulator of ribonuclease activity B FR848_26680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FR848_26680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FR848_26685 PF04074 YhcH/YjgK/YiaL FR848_26695 PF08052 PyrBI operon leader peptide FR848_26705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FR848_26705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FR848_26710 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FR848_26710 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FR848_26715 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FR848_26715 PF18416 N-acetylglucosamine binding protein domain 2 FR848_26720 PF01042 Endoribonuclease L-PSP FR848_26730 PF00690 Cation transporter/ATPase, N-terminus FR848_26730 PF00689 Cation transporting ATPase, C-terminus FR848_26735 PF00356 Bacterial regulatory proteins, lacI family FR848_26740 PF00367 phosphotransferase system, EIIB FR848_26740 PF02378 Phosphotransferase system, EIIC FR848_26745 PF00128 Alpha amylase, catalytic domain FR848_26745 PF11941 Domain of unknown function (DUF3459) FR848_26750 PF02378 Phosphotransferase system, EIIC FR848_26755 PF11975 Family 4 glycosyl hydrolase C-terminal domain FR848_26755 PF02056 Family 4 glycosyl hydrolase FR848_26760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_26770 PF03477 ATP cone domain FR848_26770 PF13597 Anaerobic ribonucleoside-triphosphate reductase FR848_26780 PF04717 Type VI secretion system, phage-baseplate injector FR848_26800 PF08279 HTH domain FR848_26800 PF00874 PRD domain FR848_26800 PF05043 Mga helix-turn-helix domain FR848_26800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_26805 PF10282 Lactonase, 7-bladed beta-propeller FR848_26810 PF07071 KDGP aldolase FR848_26815 PF03841 L-seryl-tRNA selenium transferase FR848_26820 PF01979 Amidohydrolase family FR848_26850 PF07361 Cytochrome b562 FR848_26855 PF01523 Putative modulator of DNA gyrase FR848_26860 PF04751 Protein of unknown function (DUF615) FR848_26865 PF00171 Aldehyde dehydrogenase family FR848_26870 PF00465 Iron-containing alcohol dehydrogenase FR848_26885 PF01225 Mur ligase family, catalytic domain FR848_26885 PF08245 Mur ligase middle domain FR848_26885 PF02875 Mur ligase family, glutamate ligase domain FR848_26890 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FR848_26895 PF02653 Branched-chain amino acid transport system / permease component FR848_26900 PF02653 Branched-chain amino acid transport system / permease component FR848_26905 PF00005 ABC transporter FR848_26910 PF13407 Periplasmic binding protein domain FR848_26915 PF00719 Inorganic pyrophosphatase FR848_26920 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FR848_26925 PF04357 TamB, inner membrane protein subunit of TAM complex FR848_26930 PF07244 Surface antigen variable number repeat FR848_26930 PF17243 POTRA domain TamA domain 1 FR848_26930 PF01103 Surface antigen FR848_26935 PF01625 Peptide methionine sulfoxide reductase FR848_26940 PF00571 CBS domain FR848_26940 PF03471 Transporter associated domain FR848_26940 PF01595 Cyclin M transmembrane N-terminal domain FR848_26945 PF01306 LacY proton/sugar symporter FR848_26950 PF02449 Beta-galactosidase FR848_26950 PF08532 Beta-galactosidase trimerisation domain FR848_26950 PF08533 Beta-galactosidase C-terminal domain FR848_26955 PF12833 Helix-turn-helix domain FR848_26955 PF02311 AraC-like ligand binding domain FR848_26960 PF06526 Protein of unknown function (DUF1107) FR848_26965 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FR848_26970 PF00459 Inositol monophosphatase family FR848_26975 PF00149 Calcineurin-like phosphoesterase FR848_26975 PF02872 5'-nucleotidase, C-terminal domain FR848_26980 PF01638 HxlR-like helix-turn-helix FR848_26985 PF05368 NmrA-like family FR848_26990 PF12833 Helix-turn-helix domain FR848_26995 PF00892 EamA-like transporter family FR848_27000 PF04405 Domain of Unknown function (DUF542) FR848_27000 PF01814 Hemerythrin HHE cation binding domain FR848_27005 PF00324 Amino acid permease FR848_27010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FR848_27010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR848_27020 PF04225 Opacity-associated protein A LysM-like domain FR848_27020 PF08525 Opacity-associated protein A N-terminal motif FR848_27030 PF03948 Ribosomal protein L9, C-terminal domain FR848_27030 PF01281 Ribosomal protein L9, N-terminal domain FR848_27035 PF01084 Ribosomal protein S18 FR848_27040 PF00436 Single-strand binding protein family FR848_27045 PF01250 Ribosomal protein S6 FR848_27050 PF07338 Protein of unknown function (DUF1471) FR848_27060 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_27065 PF01261 Xylose isomerase-like TIM barrel FR848_27070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FR848_27075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR848_27080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_27085 PF03611 PTS system sugar-specific permease component FR848_27095 PF08220 DeoR-like helix-turn-helix domain FR848_27095 PF00455 DeoR C terminal sensor domain FR848_27100 PF00326 Prolyl oligopeptidase family FR848_27105 PF07338 Protein of unknown function (DUF1471) FR848_27110 PF07338 Protein of unknown function (DUF1471) FR848_27115 PF18158 Adaptive response protein AidB N-terminal domain FR848_27115 PF02770 Acyl-CoA dehydrogenase, middle domain FR848_27115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR848_27125 PF00588 SpoU rRNA Methylase family FR848_27125 PF08032 RNA 2'-O ribose methyltransferase substrate binding FR848_27130 PF00575 S1 RNA binding domain FR848_27130 PF08206 Ribonuclease B OB domain FR848_27130 PF08461 Ribonuclease R winged-helix domain FR848_27130 PF00773 RNB domain FR848_27130 PF17876 Cold shock domain FR848_27135 PF02082 Transcriptional regulator FR848_27140 PF00709 Adenylosuccinate synthetase FR848_27145 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FR848_27150 PF01145 SPFH domain / Band 7 family FR848_27155 PF12221 Bacterial membrane protein N terminal FR848_27155 PF01145 SPFH domain / Band 7 family FR848_27160 PF13167 GTP-binding GTPase N-terminal FR848_27160 PF01926 50S ribosome-binding GTPase FR848_27160 PF16360 GTP-binding GTPase Middle Region FR848_27165 PF17209 Hfq protein FR848_27175 PF08676 MutL C terminal dimerisation domain FR848_27175 PF01119 DNA mismatch repair protein, C-terminal domain FR848_27180 PF01520 N-acetylmuramoyl-L-alanine amidase FR848_27185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FR848_27190 PF03853 YjeF-related protein N-terminus FR848_27190 PF01256 Carbohydrate kinase FR848_27195 PF08331 Domain of unknown function (DUF1730) FR848_27215 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR848_27220 PF00929 Exonuclease FR848_27225 PF03193 RsgA GTPase FR848_27230 PF02666 Phosphatidylserine decarboxylase FR848_27235 PF12795 Mechanosensitive ion channel porin domain FR848_27235 PF12794 Mechanosensitive ion channel inner membrane domain 1 FR848_27235 PF00924 Mechanosensitive ion channel FR848_27240 PF13520 Amino acid permease FR848_27245 PF00152 tRNA synthetases class II (D, K and N) FR848_27250 PF00890 FAD binding domain FR848_27250 PF02910 Fumarate reductase flavoprotein C-term FR848_27255 PF13085 2Fe-2S iron-sulfur cluster binding domain FR848_27255 PF13183 4Fe-4S dicluster domain FR848_27260 PF02300 Fumarate reductase subunit C FR848_27265 PF02313 Fumarate reductase subunit D FR848_27270 PF08212 Lipocalin-like domain FR848_27275 PF00893 Small Multidrug Resistance protein FR848_27280 PF08085 Entericidin EcnA/B family FR848_27285 PF08085 Entericidin EcnA/B family FR848_27290 PF09285 Elongation factor P, C-terminal FR848_27290 PF08207 Elongation factor P (EF-P) KOW-like domain FR848_27290 PF01132 Elongation factor P (EF-P) OB domain FR848_27295 PF04055 Radical SAM superfamily FR848_27310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_27310 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_27315 PF00577 Outer membrane usher protein FR848_27315 PF13954 PapC N-terminal domain FR848_27315 PF13953 PapC C-terminal domain FR848_27330 PF00529 HlyD membrane-fusion protein of T1SS FR848_27330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_27335 PF03412 Peptidase C39 family FR848_27335 PF00005 ABC transporter FR848_27335 PF00664 ABC transporter transmembrane region FR848_27345 PF13698 Domain of unknown function (DUF4156) FR848_27350 PF00118 TCP-1/cpn60 chaperonin family FR848_27355 PF00166 Chaperonin 10 Kd subunit FR848_27360 PF13520 Amino acid permease FR848_27365 PF04186 FxsA cytoplasmic membrane protein FR848_27370 PF00206 Lyase FR848_27370 PF10415 Fumarase C C-terminus FR848_27375 PF03605 Anaerobic c4-dicarboxylate membrane transporter FR848_27380 PF03091 CutA1 divalent ion tolerance protein FR848_27385 PF02683 Cytochrome C biogenesis protein transmembrane region FR848_27385 PF11412 Disulphide bond corrector protein DsbC FR848_27405 PF00535 Glycosyl transferase family 2 FR848_27420 PF02525 Flavodoxin-like fold FR848_27435 PF03741 Integral membrane protein TerC family FR848_27445 PF01556 DnaJ C terminal domain FR848_27445 PF00226 DnaJ domain FR848_27455 PF00083 Sugar (and other) transporter FR848_27455 PF08946 Osmosensory transporter coiled coil FR848_27460 PF03831 PhnA domain FR848_27460 PF08274 PhnA Zinc-Ribbon FR848_27465 PF06983 3-demethylubiquinone-9 3-methyltransferase FR848_27470 PF00392 Bacterial regulatory proteins, gntR family FR848_27470 PF07702 UTRA domain FR848_27475 PF06754 Phosphonate metabolism protein PhnG FR848_27480 PF05845 Bacterial phosphonate metabolism protein (PhnH) FR848_27485 PF05861 Bacterial phosphonate metabolism protein (PhnI) FR848_27490 PF06007 Phosphonate metabolism protein PhnJ FR848_27495 PF00005 ABC transporter FR848_27500 PF00005 ABC transporter FR848_27505 PF07969 Amidohydrolase family FR848_27515 PF12706 Beta-lactamase superfamily domain FR848_27525 PF02502 Ribose/Galactose Isomerase FR848_27530 PF01418 Helix-turn-helix domain, rpiR family FR848_27530 PF01380 SIS domain FR848_27535 PF13407 Periplasmic binding protein domain FR848_27540 PF00005 ABC transporter FR848_27545 PF02653 Branched-chain amino acid transport system / permease component FR848_27550 PF00834 Ribulose-phosphate 3 epimerase family FR848_27555 PF00480 ROK family FR848_27565 PF08238 Sel1 repeat FR848_27570 PF00375 Sodium:dicarboxylate symporter family FR848_27580 PF00501 AMP-binding enzyme FR848_27580 PF13193 AMP-binding enzyme C-terminal domain FR848_27580 PF16177 Acetyl-coenzyme A synthetase N-terminus FR848_27585 PF04341 Protein of unknown function, DUF485 FR848_27590 PF00474 Sodium:solute symporter family FR848_27605 PF13953 PapC C-terminal domain FR848_27605 PF13954 PapC N-terminal domain FR848_27605 PF00577 Outer membrane usher protein FR848_27610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FR848_27610 PF02753 Pili assembly chaperone PapD, C-terminal domain FR848_27620 PF04172 LrgB-like family FR848_27625 PF03788 LrgA family FR848_27630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_27630 PF03466 LysR substrate binding domain FR848_27635 PF00999 Sodium/hydrogen exchanger family FR848_27640 PF00860 Permease family FR848_27645 PF02798 Glutathione S-transferase, N-terminal domain FR848_27645 PF00043 Glutathione S-transferase, C-terminal domain FR848_27650 PF09278 MerR, DNA binding FR848_27650 PF00376 MerR family regulatory protein FR848_27655 PF12833 Helix-turn-helix domain FR848_27660 PF12792 CSS motif domain associated with EAL FR848_27660 PF00563 EAL domain FR848_27665 PF15940 Family of unknown function FR848_27675 PF07244 Surface antigen variable number repeat FR848_27675 PF01103 Surface antigen FR848_27680 PF12833 Helix-turn-helix domain FR848_27685 PF00593 TonB dependent receptor FR848_27685 PF07715 TonB-dependent Receptor Plug Domain FR848_27690 PF01464 Transglycosylase SLT domain FR848_27695 PF00436 Single-strand binding protein family FR848_27700 PF17755 UvrA DNA-binding domain FR848_27700 PF00005 ABC transporter FR848_27700 PF17760 UvrA interaction domain FR848_27715 PF04237 YjbR FR848_27720 PF01894 Uncharacterised protein family UPF0047 FR848_27725 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FR848_27730 PF00155 Aminotransferase class I and II FR848_27735 PF01168 Alanine racemase, N-terminal domain FR848_27735 PF00842 Alanine racemase, C-terminal domain FR848_27740 PF00772 DnaB-like helicase N terminal domain FR848_27740 PF03796 DnaB-like helicase C terminal domain FR848_27745 PF00107 Zinc-binding dehydrogenase FR848_27745 PF08240 Alcohol dehydrogenase GroES-like domain FR848_27750 PF09583 Phage shock protein G (Phageshock_PspG) FR848_27755 PF01207 Dihydrouridine synthase (Dus) FR848_27765 PF01475 Ferric uptake regulator family FR848_27770 PF05532 CsbD-like FR848_27775 PF01554 MatE FR848_27780 PF00717 Peptidase S24-like FR848_27780 PF01726 LexA DNA binding domain FR848_27785 PF01219 Prokaryotic diacylglycerol kinase FR848_27790 PF01553 Acyltransferase FR848_27795 PF01040 UbiA prenyltransferase family FR848_27800 PF04345 Chorismate lyase FR848_27805 PF07148 Maltose operon periplasmic protein precursor (MalM) FR848_27810 PF02264 LamB porin FR848_27815 PF17912 MalK OB fold domain FR848_27815 PF00005 ABC transporter FR848_27820 PF01547 Bacterial extracellular solute-binding protein FR848_27825 PF14785 Maltose transport system permease protein MalF P2 domain FR848_27825 PF00528 Binding-protein-dependent transport system inner membrane component FR848_27830 PF00528 Binding-protein-dependent transport system inner membrane component FR848_27835 PF06146 Phosphate-starvation-inducible E FR848_27840 PF03313 Serine dehydratase alpha chain FR848_27855 PF01042 Endoribonuclease L-PSP FR848_27865 PF14602 Hexapeptide repeat of succinyl-transferase FR848_27865 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_27865 PF12804 MobA-like NTP transferase domain FR848_27870 PF00342 Phosphoglucose isomerase FR848_27875 PF00696 Amino acid kinase family FR848_27875 PF01842 ACT domain FR848_27880 PF10127 RNA repair pathway DNA polymerase beta family FR848_27895 PF00158 Sigma-54 interaction domain FR848_27895 PF06956 Regulator of RNA terminal phosphate cyclase FR848_27900 PF01758 Sodium Bile acid symporter family FR848_27905 PF11656 YjbD family (DUF3811) FR848_27910 PF00849 RNA pseudouridylate synthase FR848_27910 PF01479 S4 domain FR848_27915 PF13936 Helix-turn-helix domain FR848_27915 PF04198 Putative sugar-binding domain FR848_27920 PF00106 short chain dehydrogenase FR848_27925 PF03610 PTS system fructose IIA component FR848_27930 PF03830 PTS system sorbose subfamily IIB component FR848_27935 PF03609 PTS system sorbose-specific iic component FR848_27940 PF03613 PTS system mannose/fructose/sorbose family IID component FR848_27945 PF08240 Alcohol dehydrogenase GroES-like domain FR848_27945 PF00107 Zinc-binding dehydrogenase FR848_27950 PF08501 Shikimate dehydrogenase substrate binding domain FR848_27965 PF03575 Peptidase family S51 FR848_27970 PF01051 Initiator Replication protein FR848_27975 PF00589 Phage integrase family FR848_28005 PF00589 Phage integrase family FR848_28040 PF00512 His Kinase A (phospho-acceptor) domain FR848_28040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_28040 PF00672 HAMP domain FR848_28045 PF00072 Response regulator receiver domain FR848_28045 PF00486 Transcriptional regulatory protein, C terminal FR848_28050 PF02321 Outer membrane efflux protein FR848_28055 PF11604 Copper binding periplasmic protein CusF FR848_28060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR848_28065 PF00873 AcrB/AcrD/AcrF family FR848_28075 PF04945 YHS domain FR848_28085 PF01551 Peptidase family M23 FR848_28085 PF08525 Opacity-associated protein A N-terminal motif FR848_28085 PF01476 LysM domain FR848_28095 PF00394 Multicopper oxidase FR848_28095 PF07731 Multicopper oxidase FR848_28095 PF07732 Multicopper oxidase FR848_28100 PF05275 Copper resistance protein B precursor (CopB) FR848_28105 PF04234 CopC domain FR848_28110 PF05425 Copper resistance protein D FR848_28115 PF00072 Response regulator receiver domain FR848_28115 PF00486 Transcriptional regulatory protein, C terminal FR848_28120 PF00672 HAMP domain FR848_28120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR848_28120 PF00512 His Kinase A (phospho-acceptor) domain FR848_28160 PF05321 Haemolysin expression modulating protein FR848_28185 PF02652 L-lactate permease FR848_28190 PF09330 D-lactate dehydrogenase, membrane binding FR848_28190 PF01565 FAD binding domain FR848_28195 PF02754 Cysteine-rich domain FR848_28200 PF13183 4Fe-4S dicluster domain FR848_28200 PF02589 LUD domain FR848_28200 PF11870 Domain of unknown function (DUF3390) FR848_28205 PF02589 LUD domain FR848_28210 PF02447 GntP family permease FR848_28215 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system FR848_28250 PF01022 Bacterial regulatory protein, arsR family FR848_28255 PF06953 Arsenical resistance operon trans-acting repressor ArsD FR848_28260 PF02374 Anion-transporting ATPase FR848_28265 PF02040 Arsenical pump membrane protein FR848_28270 PF03960 ArsC family FR848_28275 PF02374 Anion-transporting ATPase FR848_28280 PF13610 DDE domain FR848_28305 PF00665 Integrase core domain FR848_28310 PF01695 IstB-like ATP binding protein FR848_28325 PF05598 Transposase domain (DUF772) FR848_28325 PF01609 Transposase DDE domain FR848_28340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_28340 PF03466 LysR substrate binding domain FR848_28345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR848_28345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR848_28350 PF00528 Binding-protein-dependent transport system inner membrane component FR848_28360 PF00005 ABC transporter FR848_28365 PF01526 Tn3 transposase DDE domain FR848_28365 PF13700 Domain of unknown function (DUF4158) FR848_28370 PF02796 Helix-turn-helix domain of resolvase FR848_28370 PF00239 Resolvase, N terminal domain FR848_28375 PF00893 Small Multidrug Resistance protein FR848_28380 PF06965 Na+/H+ antiporter 1 FR848_28385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FR848_28395 PF00582 Universal stress protein family FR848_28400 PF01740 STAS domain FR848_28400 PF00916 Sulfate permease family FR848_28405 PF01022 Bacterial regulatory protein, arsR family FR848_28410 PF00239 Resolvase, N terminal domain FR848_28410 PF02796 Helix-turn-helix domain of resolvase FR848_28425 PF13610 DDE domain FR848_28460 PF13610 DDE domain FR848_28465 PF13610 DDE domain FR848_28480 PF00356 Bacterial regulatory proteins, lacI family FR848_28485 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FR848_28485 PF16353 Domain of unknown function(DUF4981) FR848_28485 PF02837 Glycosyl hydrolases family 2, sugar binding domain FR848_28485 PF00703 Glycosyl hydrolases family 2 FR848_28485 PF02929 Beta galactosidase small chain FR848_28490 PF01306 LacY proton/sugar symporter FR848_28525 PF02387 IncFII RepA protein family FR848_28535 PF10723 Replication regulatory protein RepB FR848_28565 PF01979 Amidohydrolase family FR848_28570 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FR848_28575 PF01175 Urocanase Rossmann-like domain FR848_28575 PF17392 Urocanase C-terminal domain FR848_28575 PF17391 Urocanase N-terminal domain FR848_28595 PF05962 HutD FR848_28600 PF07702 UTRA domain FR848_28600 PF00392 Bacterial regulatory proteins, gntR family FR848_28615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FR848_28620 PF13193 AMP-binding enzyme C-terminal domain FR848_28620 PF00501 AMP-binding enzyme FR848_28625 PF01323 DSBA-like thioredoxin domain FR848_28635 PF12759 InsA C-terminal domain FR848_28635 PF03811 InsA N-terminal domain FR848_28650 PF00005 ABC transporter FR848_28670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_28670 PF03466 LysR substrate binding domain FR848_28675 PF00557 Metallopeptidase family M24 FR848_28675 PF01321 Creatinase/Prolidase N-terminal domain FR848_28680 PF13737 Transposase DDE domain FR848_28685 PF04352 ProQ/FINO family FR848_28685 PF12602 Fertility inhibition protein N terminal FR848_28690 PF05857 TraX protein FR848_28695 PF18340 DNA relaxase TraI 2B/2B-like domain FR848_28695 PF08751 TrwC relaxase FR848_28695 PF18272 single-stranded DNA binding TraI N-terminal subdomain FR848_28695 PF07057 DNA helicase TraI FR848_28700 PF10412 Type IV secretion-system coupling protein DNA-binding domain FR848_28700 PF12615 F sex factor protein N terminal FR848_28705 PF05818 Enterobacterial TraT complement resistance protein FR848_28715 PF07916 TraG-like protein, N-terminal region FR848_28720 PF06122 Conjugative relaxosome accessory transposon protein FR848_28730 PF13728 F plasmid transfer operon protein FR848_28735 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) FR848_28740 PF13728 F plasmid transfer operon protein FR848_28755 PF13737 Transposase DDE domain FR848_28760 PF06986 Type-1V conjugative transfer system mating pair stabilisation FR848_28765 PF09673 Type-F conjugative transfer system pilin assembly protein FR848_28770 PF06834 TraU protein FR848_28775 PF12477 Sex factor F TraW protein N terminal FR848_28780 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) FR848_28785 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer FR848_28815 PF09676 Type IV conjugative transfer system lipoprotein (TraV) FR848_28830 PF03743 Bacterial conjugation TrbI-like protein FR848_28835 PF06586 TraK protein FR848_28840 PF05309 TraE protein FR848_28845 PF07178 TraL protein FR848_28850 PF05513 TraA FR848_28855 PF05509 TraY domain FR848_28865 PF05261 TraM protein, DNA-binding FR848_28870 PF01464 Transglycosylase SLT domain FR848_28930 PF06290 Plasmid SOS inhibition protein (PsiB) FR848_28935 PF02195 ParB-like nuclease domain FR848_28940 PF06006 Bacterial protein of unknown function (DUF905) FR848_28945 PF00436 Single-strand binding protein family FR848_28985 PF06440 DNA polymerase III, theta subunit FR848_28995 PF03230 Antirestriction protein FR848_29005 PF07128 Protein of unknown function (DUF1380) FR848_29015 PF01555 DNA methylase FR848_29035 PF06406 StbA protein FR848_29040 PF00717 Peptidase S24-like FR848_29045 PF00817 impB/mucB/samB family FR848_29045 PF11799 impB/mucB/samB family C-terminal domain FR848_29045 PF13438 Domain of unknown function (DUF4113) FR848_29055 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FR848_29070 PF18090 Centromere-binding protein HTH domain FR848_29070 PF02195 ParB-like nuclease domain FR848_29075 PF13614 AAA domain FR848_29095 PF04754 Putative transposase, YhgA-like FR848_29105 PF03610 PTS system fructose IIA component FR848_29105 PF00381 PTS HPr component phosphorylation site FR848_29105 PF00391 PEP-utilising enzyme, mobile domain FR848_29105 PF05524 PEP-utilising enzyme, N-terminal FR848_29110 PF02734 DAK2 domain FR848_29115 PF03050 Transposase IS66 family FR848_29115 PF13817 IS66 C-terminal element FR848_29115 PF13007 Transposase C of IS166 homeodomain FR848_29115 PF13005 zinc-finger binding domain of transposase IS66 FR848_29120 PF05717 IS66 Orf2 like protein FR848_29130 PF02733 Dak1 domain FR848_29135 PF00465 Iron-containing alcohol dehydrogenase FR848_29140 PF02954 Bacterial regulatory protein, Fis family FR848_29140 PF00158 Sigma-54 interaction domain FR848_29140 PF00989 PAS fold FR848_29145 PF01923 Cobalamin adenosyltransferase FR848_29150 PF02288 Dehydratase medium subunit FR848_29155 PF00465 Iron-containing alcohol dehydrogenase FR848_29160 PF03928 Haem-degrading FR848_29165 PF02286 Dehydratase large subunit FR848_29170 PF02288 Dehydratase medium subunit FR848_29175 PF02287 Dehydratase small subunit FR848_29215 PF13333 Integrase core domain FR848_29215 PF00665 Integrase core domain FR848_29215 PF01527 Transposase FR848_29215 PF13276 HTH-like domain FR848_29225 PF01548 Transposase FR848_29225 PF02371 Transposase IS116/IS110/IS902 family FR848_29230 PF04076 Bacterial OB fold (BOF) protein FR848_29235 PF03824 High-affinity nickel-transport protein FR848_29245 PF07690 Major Facilitator Superfamily FR848_29270 PF09828 Chromate resistance exported protein FR848_29275 PF02417 Chromate transporter FR848_29295 PF04221 RelB antitoxin FR848_29305 PF01848 Hok/gef family FR848_29340 PF13737 Transposase DDE domain FR848_29345 PF00239 Resolvase, N terminal domain FR848_29345 PF02796 Helix-turn-helix domain of resolvase FR848_29355 PF04754 Putative transposase, YhgA-like FR848_29360 PF01051 Initiator Replication protein FR848_29365 PF00589 Phage integrase family FR848_29385 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FR848_29390 PF01850 PIN domain FR848_29400 PF13610 DDE domain FR848_29415 PF13737 Transposase DDE domain FR848_29425 PF13358 DDE superfamily endonuclease FR848_29430 PF13358 DDE superfamily endonuclease FR848_29445 PF13358 DDE superfamily endonuclease FR848_29460 PF18284 DNA methylase N-terminal domain FR848_29460 PF00145 C-5 cytosine-specific DNA methylase FR848_29465 PF09019 EcoRII C terminal FR848_29465 PF09217 Restriction endonuclease EcoRII, N-terminal FR848_29475 PF13610 DDE domain FR848_29490 PF01063 Amino-transferase class IV FR848_29495 PF00920 Dehydratase family FR848_29500 PF00585 C-terminal regulatory domain of Threonine dehydratase FR848_29500 PF00291 Pyridoxal-phosphate dependent enzyme FR848_29510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR848_29515 PF03611 PTS system sugar-specific permease component FR848_29525 PF00596 Class II Aldolase and Adducin N-terminal domain FR848_29530 PF02733 Dak1 domain FR848_29545 PF07055 Enoyl reductase FAD binding domain FR848_29545 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FR848_29545 PF12241 Trans-2-enoyl-CoA reductase catalytic region FR848_29550 PF02734 DAK2 domain FR848_29555 PF02733 Dak1 domain FR848_29560 PF03466 LysR substrate binding domain FR848_29560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR848_29565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FR848_29565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FR848_29580 PF13610 DDE domain FR848_29590 PF02909 Tetracyclin repressor-like, C-terminal domain FR848_29590 PF00440 Bacterial regulatory proteins, tetR family FR848_29595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR848_29600 PF00528 Binding-protein-dependent transport system inner membrane component FR848_29605 PF00005 ABC transporter FR848_29605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_29610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR848_29610 PF00005 ABC transporter FR848_29615 PF00392 Bacterial regulatory proteins, gntR family FR848_29615 PF07702 UTRA domain FR848_29620 PF05343 M42 glutamyl aminopeptidase FR848_29625 PF07383 Protein of unknown function (DUF1496) FR848_29630 PF01131 DNA topoisomerase FR848_29630 PF01751 Toprim domain FR848_29640 PF13610 DDE domain FR848_29650 PF13411 MerR HTH family regulatory protein FR848_29655 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR848_29655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR848_29655 PF00403 Heavy-metal-associated domain FR848_29665 PF00403 Heavy-metal-associated domain FR848_29670 PF02411 MerT mercuric transport protein FR848_29675 PF00376 MerR family regulatory protein FR848_29675 PF09278 MerR, DNA binding FR848_29705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FR848_29725 PF04754 Putative transposase, YhgA-like FR848_29730 PF00239 Resolvase, N terminal domain FR848_29730 PF02796 Helix-turn-helix domain of resolvase FR848_29735 PF03400 IS1 transposase FR848_29775 PF11799 impB/mucB/samB family C-terminal domain FR848_29775 PF00817 impB/mucB/samB family FR848_29775 PF13438 Domain of unknown function (DUF4113) FR848_29780 PF00717 Peptidase S24-like FR848_29790 PF01555 DNA methylase FR848_29815 PF03230 Antirestriction protein FR848_29830 PF06440 DNA polymerase III, theta subunit FR848_29850 PF00436 Single-strand binding protein family FR848_29855 PF06006 Bacterial protein of unknown function (DUF905) FR848_29860 PF02195 ParB-like nuclease domain FR848_29865 PF06290 Plasmid SOS inhibition protein (PsiB) FR848_29870 PF06952 PsiA protein FR848_29910 PF03230 Antirestriction protein FR848_29915 PF01464 Transglycosylase SLT domain FR848_29920 PF05261 TraM protein, DNA-binding FR848_29930 PF05509 TraY domain FR848_29935 PF05513 TraA FR848_29940 PF07178 TraL protein FR848_29945 PF05309 TraE protein FR848_29950 PF06586 TraK protein FR848_29955 PF03743 Bacterial conjugation TrbI-like protein FR848_29970 PF09676 Type IV conjugative transfer system lipoprotein (TraV) FR848_30000 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer FR848_30005 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) FR848_30010 PF12477 Sex factor F TraW protein N terminal FR848_30015 PF06834 TraU protein FR848_30020 PF09673 Type-F conjugative transfer system pilin assembly protein FR848_30025 PF06986 Type-1V conjugative transfer system mating pair stabilisation FR848_30045 PF13728 F plasmid transfer operon protein FR848_30050 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) FR848_30055 PF13728 F plasmid transfer operon protein FR848_30060 PF06122 Conjugative relaxosome accessory transposon protein FR848_30065 PF07916 TraG-like protein, N-terminal region FR848_30075 PF12615 F sex factor protein N terminal FR848_30075 PF10412 Type IV secretion-system coupling protein DNA-binding domain FR848_30080 PF18272 single-stranded DNA binding TraI N-terminal subdomain FR848_30080 PF18340 DNA relaxase TraI 2B/2B-like domain FR848_30080 PF08751 TrwC relaxase FR848_30080 PF07057 DNA helicase TraI FR848_30085 PF05857 TraX protein FR848_30090 PF12602 Fertility inhibition protein N terminal FR848_30090 PF04352 ProQ/FINO family FR848_30150 PF00436 Single-strand binding protein family FR848_30165 PF00258 Flavodoxin FR848_30165 PF01613 Flavin reductase like domain FR848_30230 PF06006 Bacterial protein of unknown function (DUF905) FR848_30270 PF18340 DNA relaxase TraI 2B/2B-like domain FR848_30270 PF08751 TrwC relaxase FR848_30270 PF18272 single-stranded DNA binding TraI N-terminal subdomain FR848_30270 PF07057 DNA helicase TraI FR848_30285 PF13091 PLD-like domain FR848_30285 PF13396 Phospholipase_D-nuclease N-terminal FR848_30290 PF00437 Type II/IV secretion system protein FR848_30295 PF03743 Bacterial conjugation TrbI-like protein FR848_30305 PF04335 VirB8 protein FR848_30330 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FR848_30350 PF01464 Transglycosylase SLT domain FR848_30395 PF13610 DDE domain FR848_30405 PF01636 Phosphotransferase enzyme family FR848_30430 PF13610 DDE domain FR848_30440 PF03551 Transcriptional regulator PadR-like family FR848_30460 PF00809 Pterin binding enzyme FR848_30475 PF13599 Pentapeptide repeats (9 copies) FR848_30495 PF00809 Pterin binding enzyme FR848_30500 PF00893 Small Multidrug Resistance protein FR848_30505 PF00132 Bacterial transferase hexapeptide (six repeats) FR848_30515 PF00893 Small Multidrug Resistance protein FR848_30525 PF13495 Phage integrase, N-terminal SAM-like domain FR848_30525 PF00589 Phage integrase family