locus-tag class description IFY67_00001 PF11638 DnaA N-terminal domain IFY67_00001 PF08299 Bacterial dnaA protein helix-turn-helix IFY67_00001 PF00308 Bacterial dnaA protein IFY67_00002 PF02767 DNA polymerase III beta subunit, central domain IFY67_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain IFY67_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain IFY67_00003 PF02463 RecF/RecN/SMC N terminal domain IFY67_00004 PF00986 DNA gyrase B subunit, carboxyl terminus IFY67_00004 PF18053 DNA gyrase B subunit insert domain IFY67_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_00004 PF01751 Toprim domain IFY67_00004 PF00204 DNA gyrase B IFY67_00009 PF07729 FCD domain IFY67_00009 PF00392 Bacterial regulatory proteins, gntR family IFY67_00010 PF05035 2-keto-3-deoxy-galactonokinase IFY67_00011 PF01081 KDPG and KHG aldolase IFY67_00012 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IFY67_00012 PF13378 Enolase C-terminal domain-like IFY67_00013 PF07690 Major Facilitator Superfamily IFY67_00015 PF12566 Protein of unknown function (DUF3748) IFY67_00015 PF07676 WD40-like Beta Propeller Repeat IFY67_00016 PF07119 Protein of unknown function (DUF1375) IFY67_00017 PF00011 Hsp20/alpha crystallin family IFY67_00018 PF00011 Hsp20/alpha crystallin family IFY67_00020 PF02080 TrkA-C domain IFY67_00020 PF06826 Predicted Permease Membrane Region IFY67_00021 PF02080 TrkA-C domain IFY67_00021 PF06826 Predicted Permease Membrane Region IFY67_00022 PF00392 Bacterial regulatory proteins, gntR family IFY67_00022 PF07702 UTRA domain IFY67_00023 PF00367 phosphotransferase system, EIIB IFY67_00023 PF02378 Phosphotransferase system, EIIC IFY67_00024 PF02056 Family 4 glycosyl hydrolase IFY67_00024 PF11975 Family 4 glycosyl hydrolase C-terminal domain IFY67_00025 PF02656 Domain of unknown function (DUF202) IFY67_00026 PF02656 Domain of unknown function (DUF202) IFY67_00027 PF13186 Iron-sulfur cluster-binding domain IFY67_00027 PF04055 Radical SAM superfamily IFY67_00028 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_00029 PF02447 GntP family permease IFY67_00030 PF03466 LysR substrate binding domain IFY67_00030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00031 PF07690 Major Facilitator Superfamily IFY67_00036 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_00036 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_00036 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_00037 PF01842 ACT domain IFY67_00038 PF00072 Response regulator receiver domain IFY67_00038 PF00196 Bacterial regulatory proteins, luxR family IFY67_00039 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_00039 PF07730 Histidine kinase IFY67_00039 PF05231 MASE1 IFY67_00040 PF07690 Major Facilitator Superfamily IFY67_00041 PF07690 Major Facilitator Superfamily IFY67_00042 PF06711 Protein of unknown function (DUF1198) IFY67_00046 PF07690 Major Facilitator Superfamily IFY67_00048 PF00266 Aminotransferase class-V IFY67_00049 PF00392 Bacterial regulatory proteins, gntR family IFY67_00049 PF07702 UTRA domain IFY67_00050 PF01547 Bacterial extracellular solute-binding protein IFY67_00051 PF08402 TOBE domain IFY67_00051 PF00005 ABC transporter IFY67_00052 PF00005 ABC transporter IFY67_00052 PF08402 TOBE domain IFY67_00053 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00054 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00055 PF02264 LamB porin IFY67_00056 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IFY67_00057 PF02378 Phosphotransferase system, EIIC IFY67_00057 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_00058 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_00059 PF00356 Bacterial regulatory proteins, lacI family IFY67_00060 PF07690 Major Facilitator Superfamily IFY67_00061 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IFY67_00061 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit IFY67_00062 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IFY67_00062 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit IFY67_00063 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00063 PF03466 LysR substrate binding domain IFY67_00064 PF02585 GlcNAc-PI de-N-acetylase IFY67_00065 PF03737 Aldolase/RraA IFY67_00066 PF04303 PrpF protein IFY67_00069 PF00892 EamA-like transporter family IFY67_00070 PF00367 phosphotransferase system, EIIB IFY67_00070 PF02378 Phosphotransferase system, EIIC IFY67_00071 PF00367 phosphotransferase system, EIIB IFY67_00071 PF02378 Phosphotransferase system, EIIC IFY67_00072 PF13580 SIS domain IFY67_00073 PF07690 Major Facilitator Superfamily IFY67_00074 PF02321 Outer membrane efflux protein IFY67_00075 PF00873 AcrB/AcrD/AcrF family IFY67_00076 PF00529 HlyD membrane-fusion protein of T1SS IFY67_00076 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_00077 PF00583 Acetyltransferase (GNAT) family IFY67_00078 PF00440 Bacterial regulatory proteins, tetR family IFY67_00079 PF07690 Major Facilitator Superfamily IFY67_00080 PF03466 LysR substrate binding domain IFY67_00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00085 PF03180 NLPA lipoprotein IFY67_00087 PF00293 NUDIX domain IFY67_00088 PF12706 Beta-lactamase superfamily domain IFY67_00089 PF01965 DJ-1/PfpI family IFY67_00090 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_00090 PF00107 Zinc-binding dehydrogenase IFY67_00094 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_00094 PF00107 Zinc-binding dehydrogenase IFY67_00099 PF17345 Family of unknown function (DUF5375) IFY67_00104 PF04606 Ogr/Delta-like zinc finger IFY67_00108 PF00589 Phage integrase family IFY67_00108 PF14659 Phage integrase, N-terminal SAM-like domain IFY67_00108 PF13356 Arm DNA-binding domain IFY67_00111 PF01055 Glycosyl hydrolases family 31 IFY67_00111 PF13802 Galactose mutarotase-like IFY67_00113 PF02056 Family 4 glycosyl hydrolase IFY67_00113 PF11975 Family 4 glycosyl hydrolase C-terminal domain IFY67_00114 PF00367 phosphotransferase system, EIIB IFY67_00114 PF02378 Phosphotransferase system, EIIC IFY67_00115 PF05170 AsmA family IFY67_00116 PF00860 Permease family IFY67_00117 PF03616 Sodium/glutamate symporter IFY67_00118 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_00118 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_00119 PF00230 Major intrinsic protein IFY67_00120 PF06005 Cell division protein ZapB IFY67_00122 PF02611 CDP-diacylglycerol pyrophosphatase IFY67_00124 PF00121 Triosephosphate isomerase IFY67_00125 PF07305 Protein of unknown function (DUF1454) IFY67_00126 PF05656 Protein of unknown function (DUF805) IFY67_00127 PF00970 Oxidoreductase FAD-binding domain IFY67_00127 PF00175 Oxidoreductase NAD-binding domain IFY67_00128 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IFY67_00129 PF17191 RecG wedge domain IFY67_00129 PF00271 Helicase conserved C-terminal domain IFY67_00129 PF00270 DEAD/DEAH box helicase IFY67_00130 PF00588 SpoU rRNA Methylase family IFY67_00130 PF12105 SpoU, rRNA methylase, C-terminal IFY67_00131 PF04607 Region found in RelA / SpoT proteins IFY67_00131 PF13291 ACT domain IFY67_00131 PF02824 TGS domain IFY67_00132 PF01192 RNA polymerase Rpb6 IFY67_00133 PF00625 Guanylate kinase IFY67_00134 PF03120 NAD-dependent DNA ligase OB-fold domain IFY67_00134 PF01653 NAD-dependent DNA ligase adenylation domain IFY67_00135 PF03458 UPF0126 domain IFY67_00137 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IFY67_00137 PF12833 Helix-turn-helix domain IFY67_00137 PF02805 Metal binding domain of Ada IFY67_00137 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IFY67_00139 PF08340 Domain of unknown function (DUF1732) IFY67_00139 PF03755 YicC-like family, N-terminal region IFY67_00142 PF00005 ABC transporter IFY67_00145 PF03725 3' exoribonuclease family, domain 2 IFY67_00145 PF01138 3' exoribonuclease family, domain 1 IFY67_00146 PF00156 Phosphoribosyl transferase domain IFY67_00148 PF00440 Bacterial regulatory proteins, tetR family IFY67_00149 PF00692 dUTPase IFY67_00150 PF02441 Flavoprotein IFY67_00150 PF04127 DNA / pantothenate metabolism flavoprotein IFY67_00151 PF04002 RadC-like JAB domain IFY67_00152 PF00830 Ribosomal L28 family IFY67_00153 PF00471 Ribosomal protein L33 IFY67_00154 PF06827 Zinc finger found in FPG and IleRS IFY67_00154 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IFY67_00154 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IFY67_00155 PF01467 Cytidylyltransferase-like IFY67_00156 PF00535 Glycosyl transferase family 2 IFY67_00157 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IFY67_00158 PF00535 Glycosyl transferase family 2 IFY67_00159 PF13439 Glycosyltransferase Family 4 IFY67_00159 PF00534 Glycosyl transferases group 1 IFY67_00160 PF13439 Glycosyltransferase Family 4 IFY67_00160 PF00534 Glycosyl transferases group 1 IFY67_00161 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IFY67_00164 PF04932 O-Antigen ligase IFY67_00166 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IFY67_00167 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IFY67_00168 PF01370 NAD dependent epimerase/dehydratase family IFY67_00169 PF00155 Aminotransferase class I and II IFY67_00170 PF00107 Zinc-binding dehydrogenase IFY67_00170 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_00171 PF00535 Glycosyl transferase family 2 IFY67_00172 PF04748 Divergent polysaccharide deacetylase IFY67_00173 PF01551 Peptidase family M23 IFY67_00174 PF01676 Metalloenzyme superfamily IFY67_00174 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IFY67_00175 PF00581 Rhodanese-like domain IFY67_00176 PF00462 Glutaredoxin IFY67_00177 PF02556 Preprotein translocase subunit SecB IFY67_00178 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IFY67_00178 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IFY67_00179 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IFY67_00179 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IFY67_00180 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_00180 PF06426 Serine acetyltransferase, N-terminal IFY67_00181 PF00588 SpoU rRNA Methylase family IFY67_00182 PF01070 FMN-dependent dehydrogenase IFY67_00183 PF07729 FCD domain IFY67_00183 PF00392 Bacterial regulatory proteins, gntR family IFY67_00184 PF02652 L-lactate permease IFY67_00185 PF10928 Protein of unknown function (DUF2810) IFY67_00187 PF05068 Mannitol repressor IFY67_00188 PF08125 Mannitol dehydrogenase C-terminal domain IFY67_00188 PF01232 Mannitol dehydrogenase Rossmann domain IFY67_00189 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_00189 PF02378 Phosphotransferase system, EIIC IFY67_00189 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_00190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_00190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_00190 PF02378 Phosphotransferase system, EIIC IFY67_00191 PF00043 Glutathione S-transferase, C-terminal domain IFY67_00191 PF13417 Glutathione S-transferase, N-terminal domain IFY67_00192 PF03841 L-seryl-tRNA selenium transferase IFY67_00192 PF12390 Selenocysteine synthase N terminal IFY67_00193 PF09106 Elongation factor SelB, winged helix IFY67_00193 PF03144 Elongation factor Tu domain 2 IFY67_00193 PF00009 Elongation factor Tu GTP binding domain IFY67_00193 PF09107 Elongation factor SelB, winged helix IFY67_00194 PF12800 4Fe-4S binding domain IFY67_00194 PF13247 4Fe-4S dicluster domain IFY67_00195 PF00155 Aminotransferase class I and II IFY67_00196 PF00128 Alpha amylase, catalytic domain IFY67_00197 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IFY67_00198 PF12833 Helix-turn-helix domain IFY67_00199 PF12833 Helix-turn-helix domain IFY67_00200 PF02653 Branched-chain amino acid transport system / permease component IFY67_00201 PF00005 ABC transporter IFY67_00202 PF13407 Periplasmic binding protein domain IFY67_00204 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_00204 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_00205 PF05360 yiaA/B two helix domain IFY67_00206 PF05360 yiaA/B two helix domain IFY67_00207 PF05360 yiaA/B two helix domain IFY67_00208 PF01757 Acyltransferase family IFY67_00209 PF13983 YsaB-like lipoprotein IFY67_00210 PF02091 Glycyl-tRNA synthetase alpha subunit IFY67_00211 PF02092 Glycyl-tRNA synthetase beta subunit IFY67_00211 PF05746 DALR anticodon binding domain IFY67_00214 PF00665 Integrase core domain IFY67_00214 PF13276 HTH-like domain IFY67_00214 PF13333 Integrase core domain IFY67_00217 PF01848 Hok/gef family IFY67_00218 PF00005 ABC transporter IFY67_00218 PF12848 ABC transporter IFY67_00219 PF00313 'Cold-shock' DNA-binding domain IFY67_00220 PF01381 Helix-turn-helix IFY67_00221 PF07690 Major Facilitator Superfamily IFY67_00222 PF11254 Protein of unknown function (DUF3053) IFY67_00223 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFY67_00223 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IFY67_00224 PF07690 Major Facilitator Superfamily IFY67_00225 PF00294 pfkB family carbohydrate kinase IFY67_00227 PF00356 Bacterial regulatory proteins, lacI family IFY67_00228 PF00691 OmpA family IFY67_00228 PF13488 Glycine zipper IFY67_00229 PF01568 Molydopterin dinucleotide binding domain IFY67_00229 PF00384 Molybdopterin oxidoreductase IFY67_00229 PF18364 Molybdopterin oxidoreductase N-terminal domain IFY67_00230 PF00583 Acetyltransferase (GNAT) family IFY67_00231 PF03352 Methyladenine glycosylase IFY67_00232 PF03797 Autotransporter beta-domain IFY67_00233 PF07690 Major Facilitator Superfamily IFY67_00234 PF08019 Phosphoethanolamine transferase EptA/EptB IFY67_00234 PF00884 Sulfatase IFY67_00235 PF00884 Sulfatase IFY67_00235 PF08019 Phosphoethanolamine transferase EptA/EptB IFY67_00238 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_00239 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00240 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_00240 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00241 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_00241 PF00005 ABC transporter IFY67_00242 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_00242 PF00005 ABC transporter IFY67_00243 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_00243 PF00005 ABC transporter IFY67_00245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IFY67_00246 PF07238 PilZ domain IFY67_00246 PF03552 Cellulose synthase IFY67_00246 PF00535 Glycosyl transferase family 2 IFY67_00247 PF00535 Glycosyl transferase family 2 IFY67_00247 PF03170 Bacterial cellulose synthase subunit IFY67_00247 PF07238 PilZ domain IFY67_00248 PF03552 Cellulose synthase IFY67_00248 PF00535 Glycosyl transferase family 2 IFY67_00248 PF07238 PilZ domain IFY67_00249 PF03170 Bacterial cellulose synthase subunit IFY67_00250 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) IFY67_00252 PF01270 Glycosyl hydrolases family 8 IFY67_00253 PF11658 Cellulose biosynthesis protein BcsG IFY67_00254 PF11120 Cellulose biosynthesis protein BcsF IFY67_00255 PF10995 Cellulose biosynthesis GIL IFY67_00256 PF10945 Cellulose biosynthesis protein BcsR IFY67_00257 PF06564 Cellulose biosynthesis protein BcsQ IFY67_00258 PF07238 PilZ domain IFY67_00258 PF00535 Glycosyl transferase family 2 IFY67_00259 PF03170 Bacterial cellulose synthase subunit IFY67_00260 PF01270 Glycosyl hydrolases family 8 IFY67_00261 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) IFY67_00262 PF00563 EAL domain IFY67_00262 PF00990 Diguanylate cyclase, GGDEF domain IFY67_00262 PF17154 Gammaproteobacterial periplasmic sensor domain IFY67_00262 PF00672 HAMP domain IFY67_00263 PF00375 Sodium:dicarboxylate symporter family IFY67_00264 PF05193 Peptidase M16 inactive domain IFY67_00264 PF00675 Insulinase (Peptidase family M16) IFY67_00265 PF00294 pfkB family carbohydrate kinase IFY67_00266 PF05170 AsmA family IFY67_00267 PF00083 Sugar (and other) transporter IFY67_00267 PF07690 Major Facilitator Superfamily IFY67_00268 PF03631 Virulence factor BrkB IFY67_00269 PF03466 LysR substrate binding domain IFY67_00269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00270 PF03466 LysR substrate binding domain IFY67_00272 PF13302 Acetyltransferase (GNAT) domain IFY67_00273 PF01204 Trehalase IFY67_00274 PF00465 Iron-containing alcohol dehydrogenase IFY67_00276 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFY67_00276 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_00277 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IFY67_00278 PF01569 PAP2 superfamily IFY67_00279 PF01432 Peptidase family M3 IFY67_00280 PF01432 Peptidase family M3 IFY67_00281 PF04445 Putative SAM-dependent methyltransferase IFY67_00282 PF00854 POT family IFY67_00283 PF00582 Universal stress protein family IFY67_00284 PF10625 Universal stress protein B (UspB) IFY67_00285 PF01384 Phosphate transporter family IFY67_00287 PF00571 CBS domain IFY67_00287 PF03448 MgtE intracellular N domain IFY67_00287 PF01769 Divalent cation transporter IFY67_00288 PF08753 NikR C terminal nickel binding domain IFY67_00288 PF01402 Ribbon-helix-helix protein, copG family IFY67_00289 PF00005 ABC transporter IFY67_00290 PF00005 ABC transporter IFY67_00291 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00292 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00293 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_00294 PF03466 LysR substrate binding domain IFY67_00294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00295 PF05870 Phenolic acid decarboxylase (PAD) IFY67_00296 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IFY67_00297 PF00535 Glycosyl transferase family 2 IFY67_00298 PF00551 Formyl transferase IFY67_00298 PF02911 Formyl transferase, C-terminal domain IFY67_00298 PF01370 NAD dependent epimerase/dehydratase family IFY67_00299 PF01522 Polysaccharide deacetylase IFY67_00300 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IFY67_00301 PF00892 EamA-like transporter family IFY67_00303 PF01594 AI-2E family transporter IFY67_00304 PF07690 Major Facilitator Superfamily IFY67_00305 PF08786 DcrB IFY67_00306 PF02592 Putative vitamin uptake transporter IFY67_00307 PF01206 Sulfurtransferase TusA IFY67_00308 PF00403 Heavy-metal-associated domain IFY67_00309 PF07947 YhhN family IFY67_00310 PF10694 Protein of unknown function (DUF2500) IFY67_00311 PF06611 Protein of unknown function (DUF1145) IFY67_00313 PF02881 SRP54-type protein, helical bundle domain IFY67_00313 PF00448 SRP54-type protein, GTPase domain IFY67_00314 PF00005 ABC transporter IFY67_00315 PF18075 FtsX extracellular domain IFY67_00315 PF02687 FtsX-like permease family IFY67_00316 PF04545 Sigma-70, region 4 IFY67_00316 PF04542 Sigma-70 region 2 IFY67_00317 PF00155 Aminotransferase class I and II IFY67_00317 PF00392 Bacterial regulatory proteins, gntR family IFY67_00318 PF00202 Aminotransferase class-III IFY67_00320 PF13458 Periplasmic binding protein IFY67_00321 PF12568 Acetyltransferase (GNAT) domain, PanZ IFY67_00322 PF13458 Periplasmic binding protein IFY67_00323 PF02653 Branched-chain amino acid transport system / permease component IFY67_00324 PF02653 Branched-chain amino acid transport system / permease component IFY67_00324 PF11862 Domain of unknown function (DUF3382) IFY67_00325 PF00005 ABC transporter IFY67_00325 PF12399 Branched-chain amino acid ATP-binding cassette transporter IFY67_00326 PF00005 ABC transporter IFY67_00327 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IFY67_00329 PF13416 Bacterial extracellular solute-binding protein IFY67_00330 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00331 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00332 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00333 PF00005 ABC transporter IFY67_00333 PF17912 MalK OB fold domain IFY67_00334 PF03009 Glycerophosphoryl diester phosphodiesterase family IFY67_00335 PF10956 Protein of unknown function (DUF2756) IFY67_00337 PF00583 Acetyltransferase (GNAT) family IFY67_00339 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_00339 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_00340 PF17954 Quercetinase C-terminal cupin domain IFY67_00340 PF02678 Pirin IFY67_00341 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IFY67_00341 PF00356 Bacterial regulatory proteins, lacI family IFY67_00342 PF01202 Shikimate kinase IFY67_00343 PF02447 GntP family permease IFY67_00344 PF01118 Semialdehyde dehydrogenase, NAD binding domain IFY67_00344 PF02774 Semialdehyde dehydrogenase, dimerisation domain IFY67_00345 PF02806 Alpha amylase, C-terminal all-beta domain IFY67_00345 PF00128 Alpha amylase, catalytic domain IFY67_00345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IFY67_00346 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IFY67_00346 PF00128 Alpha amylase, catalytic domain IFY67_00346 PF18390 Glycogen debranching enzyme C-terminal domain IFY67_00347 PF00483 Nucleotidyl transferase IFY67_00348 PF00483 Nucleotidyl transferase IFY67_00349 PF08323 Starch synthase catalytic domain IFY67_00349 PF00534 Glycosyl transferases group 1 IFY67_00350 PF00343 Carbohydrate phosphorylase IFY67_00353 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IFY67_00353 PF01266 FAD dependent oxidoreductase IFY67_00354 PF00581 Rhodanese-like domain IFY67_00355 PF01694 Rhomboid family IFY67_00355 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IFY67_00356 PF08220 DeoR-like helix-turn-helix domain IFY67_00356 PF00455 DeoR C terminal sensor domain IFY67_00357 PF00196 Bacterial regulatory proteins, luxR family IFY67_00357 PF17874 MalT-like TPR region IFY67_00358 PF00343 Carbohydrate phosphorylase IFY67_00359 PF02446 4-alpha-glucanotransferase IFY67_00360 PF02447 GntP family permease IFY67_00361 PF01106 NifU-like domain IFY67_00361 PF01521 Iron-sulphur cluster biosynthesis IFY67_00362 PF00156 Phosphoribosyl transferase domain IFY67_00363 PF00561 alpha/beta hydrolase fold IFY67_00365 PF09012 FeoC like transcriptional regulator IFY67_00366 PF17910 FeoB cytosolic helical domain IFY67_00366 PF02421 Ferrous iron transport protein B IFY67_00366 PF07664 Ferrous iron transport protein B C terminus IFY67_00366 PF07670 Nucleoside recognition IFY67_00367 PF04023 FeoA domain IFY67_00368 PF00575 S1 RNA binding domain IFY67_00368 PF16921 Tex protein YqgF-like domain IFY67_00368 PF09371 Tex-like protein N-terminal domain IFY67_00368 PF17674 HHH domain IFY67_00369 PF03449 Transcription elongation factor, N-terminal IFY67_00369 PF01272 Transcription elongation factor, GreA/GreB, C-term IFY67_00370 PF00072 Response regulator receiver domain IFY67_00370 PF00486 Transcriptional regulatory protein, C terminal IFY67_00371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_00371 PF00512 His Kinase A (phospho-acceptor) domain IFY67_00371 PF00672 HAMP domain IFY67_00372 PF01293 Phosphoenolpyruvate carboxykinase IFY67_00373 PF01430 Hsp33 protein IFY67_00374 PF01479 S4 domain IFY67_00375 PF13419 Haloacid dehalogenase-like hydrolase IFY67_00376 PF07095 Intracellular growth attenuator protein IgaA IFY67_00377 PF00293 NUDIX domain IFY67_00378 PF00912 Transglycosylase IFY67_00378 PF00905 Penicillin binding protein transpeptidase domain IFY67_00378 PF17092 Penicillin-binding protein OB-like domain IFY67_00382 PF00263 Bacterial type II and III secretion system protein IFY67_00382 PF03958 Bacterial type II/III secretion system short domain IFY67_00383 PF01202 Shikimate kinase IFY67_00384 PF01761 3-dehydroquinate synthase IFY67_00385 PF01761 3-dehydroquinate synthase IFY67_00386 PF05036 Sporulation related domain IFY67_00387 PF02086 D12 class N6 adenine-specific DNA methyltransferase IFY67_00388 PF00834 Ribulose-phosphate 3 epimerase family IFY67_00389 PF13419 Haloacid dehalogenase-like hydrolase IFY67_00390 PF00579 tRNA synthetases class I (W and Y) IFY67_00391 PF14824 Sirohaem biosynthesis protein central IFY67_00391 PF10414 Sirohaem synthase dimerisation region IFY67_00391 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFY67_00392 PF13806 Rieske-like [2Fe-2S] domain IFY67_00393 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IFY67_00393 PF04324 BFD-like [2Fe-2S] binding domain IFY67_00393 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IFY67_00393 PF18267 Rubredoxin NAD+ reductase C-terminal domain IFY67_00393 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_00395 PF07969 Amidohydrolase family IFY67_00396 PF07690 Major Facilitator Superfamily IFY67_00397 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IFY67_00398 PF10832 Protein of unknown function (DUF2559) IFY67_00399 PF02661 Fic/DOC family IFY67_00400 PF00117 Glutamine amidotransferase class-I IFY67_00401 PF00202 Aminotransferase class-III IFY67_00402 PF12805 FUSC-like inner membrane protein yccS IFY67_00403 PF00027 Cyclic nucleotide-binding domain IFY67_00403 PF13545 Crp-like helix-turn-helix domain IFY67_00404 PF02566 OsmC-like protein IFY67_00405 PF00485 Phosphoribulokinase / Uridine kinase family IFY67_00406 PF06794 Uncharacterised protein family (UPF0270) IFY67_00407 PF00561 alpha/beta hydrolase fold IFY67_00408 PF00005 ABC transporter IFY67_00408 PF12848 ABC transporter IFY67_00409 PF02525 Flavodoxin-like fold IFY67_00410 PF02254 TrkA-N domain IFY67_00410 PF00999 Sodium/hydrogen exchanger family IFY67_00411 PF09526 Probable metal-binding protein (DUF2387) IFY67_00412 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFY67_00413 PF04102 SlyX IFY67_00414 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFY67_00414 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IFY67_00415 PF13309 HTH domain IFY67_00415 PF08348 YheO-like PAS domain IFY67_00416 PF02635 DsrE/DsrF-like family IFY67_00417 PF02635 DsrE/DsrF-like family IFY67_00418 PF04077 DsrH like protein IFY67_00419 PF00164 Ribosomal protein S12/S23 IFY67_00420 PF00177 Ribosomal protein S7p/S5e IFY67_00421 PF03144 Elongation factor Tu domain 2 IFY67_00421 PF00009 Elongation factor Tu GTP binding domain IFY67_00421 PF14492 Elongation Factor G, domain II IFY67_00421 PF00679 Elongation factor G C-terminus IFY67_00421 PF03764 Elongation factor G, domain IV IFY67_00422 PF00009 Elongation factor Tu GTP binding domain IFY67_00422 PF03143 Elongation factor Tu C-terminal domain IFY67_00422 PF03144 Elongation factor Tu domain 2 IFY67_00423 PF04324 BFD-like [2Fe-2S] binding domain IFY67_00424 PF00210 Ferritin-like domain IFY67_00425 PF01478 Type IV leader peptidase family IFY67_00426 PF00338 Ribosomal protein S10p/S20e IFY67_00427 PF00297 Ribosomal protein L3 IFY67_00428 PF00573 Ribosomal protein L4/L1 family IFY67_00429 PF00276 Ribosomal protein L23 IFY67_00430 PF03947 Ribosomal Proteins L2, C-terminal domain IFY67_00430 PF00181 Ribosomal Proteins L2, RNA binding domain IFY67_00431 PF00203 Ribosomal protein S19 IFY67_00432 PF00237 Ribosomal protein L22p/L17e IFY67_00433 PF00189 Ribosomal protein S3, C-terminal domain IFY67_00433 PF07650 KH domain IFY67_00434 PF00252 Ribosomal protein L16p/L10e IFY67_00435 PF00831 Ribosomal L29 protein IFY67_00436 PF00366 Ribosomal protein S17 IFY67_00437 PF00238 Ribosomal protein L14p/L23e IFY67_00438 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IFY67_00438 PF00467 KOW motif IFY67_00439 PF00281 Ribosomal protein L5 IFY67_00439 PF00673 ribosomal L5P family C-terminus IFY67_00440 PF00253 Ribosomal protein S14p/S29e IFY67_00441 PF00410 Ribosomal protein S8 IFY67_00442 PF00347 Ribosomal protein L6 IFY67_00443 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IFY67_00444 PF00333 Ribosomal protein S5, N-terminal domain IFY67_00444 PF03719 Ribosomal protein S5, C-terminal domain IFY67_00445 PF00327 Ribosomal protein L30p/L7e IFY67_00446 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IFY67_00447 PF00344 SecY translocase IFY67_00448 PF00416 Ribosomal protein S13/S18 IFY67_00449 PF00163 Ribosomal protein S4/S9 N-terminal domain IFY67_00449 PF01479 S4 domain IFY67_00450 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IFY67_00450 PF01000 RNA polymerase Rpb3/RpoA insert domain IFY67_00450 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IFY67_00451 PF01196 Ribosomal protein L17 IFY67_00452 PF09350 Domain of unknown function (DUF1992) IFY67_00453 PF13411 MerR HTH family regulatory protein IFY67_00454 PF03889 Alternative ribosome-rescue factor A IFY67_00455 PF01741 Large-conductance mechanosensitive channel, MscL IFY67_00456 PF02254 TrkA-N domain IFY67_00456 PF02080 TrkA-C domain IFY67_00457 PF01029 NusB family IFY67_00457 PF01189 16S rRNA methyltransferase RsmB/F IFY67_00458 PF00551 Formyl transferase IFY67_00458 PF02911 Formyl transferase, C-terminal domain IFY67_00459 PF01327 Polypeptide deformylase IFY67_00460 PF17782 DprA winged helix domain IFY67_00460 PF02481 DNA recombination-mediator protein A IFY67_00461 PF04361 Protein of unknown function (DUF494) IFY67_00462 PF01396 Topoisomerase DNA binding C4 zinc finger IFY67_00463 PF01300 Telomere recombination IFY67_00464 PF08501 Shikimate dehydrogenase substrate binding domain IFY67_00464 PF01488 Shikimate / quinate 5-dehydrogenase IFY67_00464 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IFY67_00465 PF07369 Protein of unknown function (DUF1488) IFY67_00466 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_00473 PF00873 AcrB/AcrD/AcrF family IFY67_00474 PF00529 HlyD membrane-fusion protein of T1SS IFY67_00474 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_00475 PF00440 Bacterial regulatory proteins, tetR family IFY67_00475 PF08361 MAATS-type transcriptional repressor, C-terminal region IFY67_00476 PF02954 Bacterial regulatory protein, Fis family IFY67_00477 PF01207 Dihydrouridine synthase (Dus) IFY67_00479 PF00474 Sodium:solute symporter family IFY67_00480 PF00474 Sodium:solute symporter family IFY67_00481 PF06196 Protein of unknown function (DUF997) IFY67_00482 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IFY67_00482 PF02785 Biotin carboxylase C-terminal domain IFY67_00482 PF00289 Biotin carboxylase, N-terminal domain IFY67_00483 PF00364 Biotin-requiring enzyme IFY67_00484 PF01220 Dehydroquinase class II IFY67_00485 PF01794 Ferric reductase like transmembrane component IFY67_00486 PF00174 Oxidoreductase molybdopterin binding domain IFY67_00487 PF17157 Gammaproteobacterial periplasmic sensor domain IFY67_00487 PF00563 EAL domain IFY67_00487 PF00990 Diguanylate cyclase, GGDEF domain IFY67_00489 PF04085 rod shape-determining protein MreC IFY67_00490 PF04093 rod shape-determining protein MreD IFY67_00491 PF02545 Maf-like protein IFY67_00492 PF00575 S1 RNA binding domain IFY67_00492 PF10150 Ribonuclease E/G family IFY67_00493 PF13116 Protein of unknown function IFY67_00493 PF13502 AsmA-like C-terminal region IFY67_00494 PF01523 Putative modulator of DNA gyrase IFY67_00495 PF03466 LysR substrate binding domain IFY67_00495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00496 PF07869 Protein of unknown function (DUF1656) IFY67_00497 PF13533 Biotin-lipoyl like IFY67_00498 PF04632 Fusaric acid resistance protein family IFY67_00499 PF01337 Barstar (barnase inhibitor) IFY67_00500 PF07338 Protein of unknown function (DUF1471) IFY67_00501 PF07338 Protein of unknown function (DUF1471) IFY67_00502 PF01316 Arginine repressor, DNA binding domain IFY67_00502 PF02863 Arginine repressor, C-terminal domain IFY67_00503 PF00056 lactate/malate dehydrogenase, NAD binding domain IFY67_00503 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IFY67_00504 PF13180 PDZ domain IFY67_00505 PF00595 PDZ domain IFY67_00505 PF13180 PDZ domain IFY67_00506 PF13180 PDZ domain IFY67_00506 PF00595 PDZ domain IFY67_00507 PF06295 Protein of unknown function (DUF1043) IFY67_00508 PF03969 AFG1-like ATPase IFY67_00509 PF00572 Ribosomal protein L13 IFY67_00510 PF00380 Ribosomal protein S9/S16 IFY67_00511 PF00043 Glutathione S-transferase, C-terminal domain IFY67_00511 PF02798 Glutathione S-transferase, N-terminal domain IFY67_00512 PF04386 Stringent starvation protein B IFY67_00513 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase IFY67_00514 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IFY67_00514 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_00515 PF01493 GXGXG motif IFY67_00515 PF04898 Glutamate synthase central domain IFY67_00515 PF00310 Glutamine amidotransferases class-II IFY67_00515 PF01645 Conserved region in glutamate synthase IFY67_00516 PF04055 Radical SAM superfamily IFY67_00516 PF16199 Radical_SAM C-terminal domain IFY67_00517 PF07690 Major Facilitator Superfamily IFY67_00518 PF07690 Major Facilitator Superfamily IFY67_00519 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_00519 PF00107 Zinc-binding dehydrogenase IFY67_00520 PF03786 D-mannonate dehydratase (UxuA) IFY67_00521 PF00072 Response regulator receiver domain IFY67_00521 PF00512 His Kinase A (phospho-acceptor) domain IFY67_00521 PF01627 Hpt domain IFY67_00521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_00521 PF00989 PAS fold IFY67_00521 PF18415 Histidine kinase receptor ArcB trans-membrane domain IFY67_00523 PF00912 Transglycosylase IFY67_00524 PF00381 PTS HPr component phosphorylation site IFY67_00525 PF03668 P-loop ATPase protein family IFY67_00526 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_00527 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IFY67_00528 PF04552 Sigma-54, DNA binding domain IFY67_00528 PF04963 Sigma-54 factor, core binding domain IFY67_00528 PF00309 Sigma-54 factor, Activator interacting domain (AID) IFY67_00529 PF00005 ABC transporter IFY67_00529 PF12399 Branched-chain amino acid ATP-binding cassette transporter IFY67_00530 PF03968 OstA-like protein IFY67_00531 PF06835 Lipopolysaccharide-assembly, LptC-related IFY67_00533 PF01380 SIS domain IFY67_00533 PF00571 CBS domain IFY67_00534 PF01699 Sodium/calcium exchanger protein IFY67_00535 PF00005 ABC transporter IFY67_00536 PF02405 Permease MlaE IFY67_00537 PF02470 MlaD protein IFY67_00538 PF05494 MlaC protein IFY67_00539 PF13466 STAS domain IFY67_00540 PF01722 BolA-like protein IFY67_00541 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IFY67_00542 PF13693 Winged helix-turn-helix DNA-binding IFY67_00543 PF00348 Polyprenyl synthetase IFY67_00544 PF00829 Ribosomal prokaryotic L21 protein IFY67_00545 PF01016 Ribosomal L27 protein IFY67_00546 PF00892 EamA-like transporter family IFY67_00547 PF01018 GTP1/OBG IFY67_00547 PF01926 50S ribosome-binding GTPase IFY67_00548 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IFY67_00549 PF03449 Transcription elongation factor, N-terminal IFY67_00549 PF01272 Transcription elongation factor, GreA/GreB, C-term IFY67_00550 PF01985 CRS1 / YhbY (CRM) domain IFY67_00551 PF01728 FtsJ-like methyltransferase IFY67_00552 PF01434 Peptidase family M41 IFY67_00552 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_00552 PF17862 AAA+ lid domain IFY67_00552 PF06480 FtsH Extracellular IFY67_00553 PF00809 Pterin binding enzyme IFY67_00554 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IFY67_00554 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IFY67_00554 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IFY67_00554 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IFY67_00555 PF03840 Preprotein translocase SecG subunit IFY67_00558 PF07437 YfaZ precursor IFY67_00559 PF15977 Winged helix-turn-helix DNA binding IFY67_00560 PF00764 Arginosuccinate synthase IFY67_00562 PF17384 RimP C-terminal SH3 domain IFY67_00562 PF02576 RimP N-terminal domain IFY67_00563 PF13184 NusA-like KH domain IFY67_00563 PF08529 NusA N-terminal domain IFY67_00563 PF00575 S1 RNA binding domain IFY67_00564 PF04760 Translation initiation factor IF-2, N-terminal region IFY67_00564 PF11987 Translation-initiation factor 2 IFY67_00564 PF00009 Elongation factor Tu GTP binding domain IFY67_00564 PF08364 Bacterial translation initiation factor IF-2 associated region IFY67_00565 PF02033 Ribosome-binding factor A IFY67_00566 PF16198 tRNA pseudouridylate synthase B C-terminal domain IFY67_00566 PF09157 Pseudouridine synthase II TruB, C-terminal IFY67_00566 PF01509 TruB family pseudouridylate synthase (N terminal domain) IFY67_00567 PF00312 Ribosomal protein S15 IFY67_00568 PF00013 KH domain IFY67_00568 PF01138 3' exoribonuclease family, domain 1 IFY67_00568 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IFY67_00568 PF03725 3' exoribonuclease family, domain 2 IFY67_00568 PF00575 S1 RNA binding domain IFY67_00569 PF07719 Tetratricopeptide repeat IFY67_00569 PF13181 Tetratricopeptide repeat IFY67_00570 PF00270 DEAD/DEAH box helicase IFY67_00570 PF12343 Cold shock protein DEAD box A IFY67_00570 PF03880 DbpA RNA binding domain IFY67_00570 PF00271 Helicase conserved C-terminal domain IFY67_00571 PF03222 Tryptophan/tyrosine permease family IFY67_00572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00572 PF03466 LysR substrate binding domain IFY67_00576 PF02785 Biotin carboxylase C-terminal domain IFY67_00576 PF00289 Biotin carboxylase, N-terminal domain IFY67_00576 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IFY67_00576 PF00364 Biotin-requiring enzyme IFY67_00576 PF00682 HMGL-like IFY67_00576 PF02436 Conserved carboxylase domain IFY67_00581 PF01039 Carboxyl transferase domain IFY67_00582 PF06857 Malonate decarboxylase delta subunit (MdcD) IFY67_00583 PF16957 Malonate decarboxylase, alpha subunit, transporter IFY67_00584 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IFY67_00586 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IFY67_00587 PF00296 Luciferase-like monooxygenase IFY67_00588 PF01136 Peptidase family U32 IFY67_00589 PF01136 Peptidase family U32 IFY67_00590 PF02036 SCP-2 sterol transfer family IFY67_00591 PF13508 Acetyltransferase (GNAT) domain IFY67_00592 PF01541 GIY-YIG catalytic domain IFY67_00594 PF01965 DJ-1/PfpI family IFY67_00595 PF13460 NAD(P)H-binding IFY67_00596 PF03773 Predicted permease IFY67_00597 PF04972 BON domain IFY67_00598 PF13580 SIS domain IFY67_00599 PF02021 Uncharacterised protein family UPF0102 IFY67_00600 PF04348 LppC putative lipoprotein IFY67_00601 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFY67_00602 PF08666 SAF domain IFY67_00602 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IFY67_00604 PF07690 Major Facilitator Superfamily IFY67_00605 PF03328 HpcH/HpaI aldolase/citrate lyase family IFY67_00606 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IFY67_00606 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IFY67_00607 PF02595 Glycerate kinase family IFY67_00612 PF02678 Pirin IFY67_00612 PF17954 Quercetinase C-terminal cupin domain IFY67_00613 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00613 PF03466 LysR substrate binding domain IFY67_00614 PF05656 Protein of unknown function (DUF805) IFY67_00615 PF13409 Glutathione S-transferase, N-terminal domain IFY67_00616 PF07681 DoxX IFY67_00617 PF13997 YqjK-like protein IFY67_00618 PF07332 Putative Actinobacterial Holin-X, holin superfamily III IFY67_00619 PF05957 Bacterial protein of unknown function (DUF883) IFY67_00620 PF06476 Protein of unknown function (DUF1090) IFY67_00621 PF13721 SecD export protein N-terminal TM region IFY67_00622 PF09335 SNARE associated Golgi protein IFY67_00623 PF07729 FCD domain IFY67_00623 PF00392 Bacterial regulatory proteins, gntR family IFY67_00624 PF07690 Major Facilitator Superfamily IFY67_00625 PF02614 Glucuronate isomerase IFY67_00626 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IFY67_00626 PF08666 SAF domain IFY67_00627 PF10688 Bacterial inner membrane protein IFY67_00628 PF00375 Sodium:dicarboxylate symporter family IFY67_00629 PF03741 Integral membrane protein TerC family IFY67_00630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_00631 PF01863 Protein of unknown function DUF45 IFY67_00634 PF05175 Methyltransferase small domain IFY67_00635 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_00635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IFY67_00636 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_00636 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IFY67_00637 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_00637 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_00638 PF04198 Putative sugar-binding domain IFY67_00639 PF00005 ABC transporter IFY67_00640 PF02653 Branched-chain amino acid transport system / permease component IFY67_00641 PF02653 Branched-chain amino acid transport system / permease component IFY67_00642 PF13407 Periplasmic binding protein domain IFY67_00643 PF01791 DeoC/LacD family aldolase IFY67_00644 PF03992 Antibiotic biosynthesis monooxygenase IFY67_00645 PF00202 Aminotransferase class-III IFY67_00646 PF03551 Transcriptional regulator PadR-like family IFY67_00647 PF08021 Siderophore-interacting FAD-binding domain IFY67_00647 PF04954 Siderophore-interacting protein IFY67_00648 PF02733 Dak1 domain IFY67_00648 PF02734 DAK2 domain IFY67_00649 PF05524 PEP-utilising enzyme, N-terminal IFY67_00649 PF00381 PTS HPr component phosphorylation site IFY67_00649 PF00391 PEP-utilising enzyme, mobile domain IFY67_00649 PF03610 PTS system fructose IIA component IFY67_00650 PF02734 DAK2 domain IFY67_00651 PF02733 Dak1 domain IFY67_00652 PF00465 Iron-containing alcohol dehydrogenase IFY67_00653 PF02954 Bacterial regulatory protein, Fis family IFY67_00653 PF00158 Sigma-54 interaction domain IFY67_00653 PF00989 PAS fold IFY67_00654 PF01923 Cobalamin adenosyltransferase IFY67_00655 PF02288 Dehydratase medium subunit IFY67_00656 PF00465 Iron-containing alcohol dehydrogenase IFY67_00657 PF03928 Haem-degrading IFY67_00658 PF02286 Dehydratase large subunit IFY67_00659 PF02288 Dehydratase medium subunit IFY67_00660 PF02287 Dehydratase small subunit IFY67_00661 PF18427 DD-reactivating factor swiveling domain IFY67_00661 PF08841 Diol dehydratase reactivase ATPase-like domain IFY67_00662 PF00230 Major intrinsic protein IFY67_00663 PF06411 HdeA/HdeB family IFY67_00664 PF01609 Transposase DDE domain IFY67_00664 PF05598 Transposase domain (DUF772) IFY67_00665 PF10544 T5orf172 domain IFY67_00669 PF13007 Transposase C of IS166 homeodomain IFY67_00669 PF13005 zinc-finger binding domain of transposase IS66 IFY67_00669 PF13817 IS66 C-terminal element IFY67_00669 PF03050 Transposase IS66 family IFY67_00671 PF01926 50S ribosome-binding GTPase IFY67_00672 PF08220 DeoR-like helix-turn-helix domain IFY67_00672 PF13280 WYL domain IFY67_00676 PF06067 Domain of unknown function (DUF932) IFY67_00677 PF03230 Antirestriction protein IFY67_00678 PF04002 RadC-like JAB domain IFY67_00679 PF06174 Protein of unknown function (DUF987) IFY67_00680 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A IFY67_00681 PF06755 CbtA_toxin of type IV toxin-antitoxin system IFY67_00686 PF03167 Uracil DNA glycosylase superfamily IFY67_00687 PF04546 Sigma-70, non-essential region IFY67_00687 PF03979 Sigma-70 factor, region 1.1 IFY67_00687 PF04542 Sigma-70 region 2 IFY67_00687 PF04545 Sigma-70, region 4 IFY67_00687 PF04539 Sigma-70 region 3 IFY67_00687 PF00140 Sigma-70 factor, region 1.2 IFY67_00688 PF08278 DNA primase DnaG DnaB-binding IFY67_00688 PF01807 CHC2 zinc finger IFY67_00688 PF10410 DnaB-helicase binding domain of primase IFY67_00688 PF08275 DNA primase catalytic core, N-terminal domain IFY67_00689 PF01165 Ribosomal protein S21 IFY67_00690 PF00814 Glycoprotease family IFY67_00692 PF02492 CobW/HypB/UreG, nucleotide-binding domain IFY67_00693 PF01730 UreF IFY67_00694 PF05194 UreE urease accessory protein, C-terminal domain IFY67_00694 PF02814 UreE urease accessory protein, N-terminal domain IFY67_00695 PF00449 Urease alpha-subunit, N-terminal domain IFY67_00695 PF01979 Amidohydrolase family IFY67_00696 PF00699 Urease beta subunit IFY67_00697 PF00547 Urease, gamma subunit IFY67_00698 PF01774 UreD urease accessory protein IFY67_00699 PF02660 Glycerol-3-phosphate acyltransferase IFY67_00700 PF02152 Dihydroneopterin aldolase IFY67_00701 PF02673 Bacitracin resistance protein BacA IFY67_00702 PF12627 Probable RNA and SrmB- binding site of polymerase A IFY67_00702 PF01743 Poly A polymerase head domain IFY67_00702 PF01966 HD domain IFY67_00703 PF08239 Bacterial SH3 domain IFY67_00704 PF01928 CYTH domain IFY67_00705 PF08335 GlnD PII-uridylyltransferase IFY67_00705 PF03710 Glutamate-ammonia ligase adenylyltransferase IFY67_00706 PF01467 Cytidylyltransferase-like IFY67_00706 PF00294 pfkB family carbohydrate kinase IFY67_00707 PF08971 Glycogen synthesis protein IFY67_00708 PF04380 Membrane fusogenic activity IFY67_00709 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IFY67_00710 PF02535 ZIP Zinc transporter IFY67_00711 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IFY67_00712 PF03738 Glutathionylspermidine synthase preATP-grasp IFY67_00713 PF06693 Protein of unknown function (DUF1190) IFY67_00714 PF02321 Outer membrane efflux protein IFY67_00715 PF00293 NUDIX domain IFY67_00716 PF06853 Protein of unknown function (DUF1249) IFY67_00717 PF00149 Calcineurin-like phosphoesterase IFY67_00718 PF05728 Uncharacterised protein family (UPF0227) IFY67_00719 PF00986 DNA gyrase B subunit, carboxyl terminus IFY67_00719 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_00719 PF01751 Toprim domain IFY67_00719 PF00204 DNA gyrase B IFY67_00720 PF03992 Antibiotic biosynthesis monooxygenase IFY67_00721 PF02525 Flavodoxin-like fold IFY67_00722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_00722 PF00512 His Kinase A (phospho-acceptor) domain IFY67_00722 PF08521 Two-component sensor kinase N-terminal IFY67_00723 PF00486 Transcriptional regulatory protein, C terminal IFY67_00723 PF00072 Response regulator receiver domain IFY67_00724 PF04076 Bacterial OB fold (BOF) protein IFY67_00725 PF06445 GyrI-like small molecule binding domain IFY67_00726 PF00521 DNA gyrase/topoisomerase IV, subunit A IFY67_00726 PF03989 DNA gyrase C-terminal domain, beta-propeller IFY67_00727 PF01553 Acyltransferase IFY67_00728 PF07731 Multicopper oxidase IFY67_00728 PF07732 Multicopper oxidase IFY67_00728 PF00394 Multicopper oxidase IFY67_00729 PF08497 Radical SAM N-terminal IFY67_00729 PF04055 Radical SAM superfamily IFY67_00729 PF11842 Domain of unknown function (DUF3362) IFY67_00731 PF00248 Aldo/keto reductase family IFY67_00732 PF00465 Iron-containing alcohol dehydrogenase IFY67_00733 PF06719 AraC-type transcriptional regulator N-terminus IFY67_00733 PF12833 Helix-turn-helix domain IFY67_00734 PF09335 SNARE associated Golgi protein IFY67_00735 PF01053 Cys/Met metabolism PLP-dependent enzyme IFY67_00736 PF01618 MotA/TolQ/ExbB proton channel family IFY67_00737 PF02472 Biopolymer transport protein ExbD/TolR IFY67_00739 PF04616 Glycosyl hydrolases family 43 IFY67_00739 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IFY67_00740 PF03350 Uncharacterized protein family, UPF0114 IFY67_00741 PF01738 Dienelactone hydrolase family IFY67_00742 PF11115 Protein of unknown function (DUF2623) IFY67_00743 PF02798 Glutathione S-transferase, N-terminal domain IFY67_00745 PF05257 CHAP domain IFY67_00745 PF03738 Glutathionylspermidine synthase preATP-grasp IFY67_00746 PF00155 Aminotransferase class I and II IFY67_00752 PF03466 LysR substrate binding domain IFY67_00752 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00753 PF01053 Cys/Met metabolism PLP-dependent enzyme IFY67_00754 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_00754 PF00571 CBS domain IFY67_00759 PF04474 Protein of unknown function (DUF554) IFY67_00760 PF01276 Orn/Lys/Arg decarboxylase, major domain IFY67_00760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IFY67_00760 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IFY67_00761 PF03825 Nucleoside H+ symporter IFY67_00762 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IFY67_00762 PF01464 Transglycosylase SLT domain IFY67_00763 PF04362 Bacterial Fe(2+) trafficking IFY67_00764 PF00633 Helix-hairpin-helix motif IFY67_00764 PF14815 NUDIX domain IFY67_00764 PF10576 Iron-sulfur binding domain of endonuclease III IFY67_00764 PF00730 HhH-GPD superfamily base excision DNA repair protein IFY67_00765 PF02390 Putative methyltransferase IFY67_00766 PF02390 Putative methyltransferase IFY67_00767 PF04320 Protein with unknown function (DUF469) IFY67_00768 PF11101 Protein of unknown function (DUF2884) IFY67_00769 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IFY67_00770 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IFY67_00770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IFY67_00771 PF03480 Bacterial extracellular solute-binding protein, family 7 IFY67_00772 PF06969 HemN C-terminal domain IFY67_00772 PF04055 Radical SAM superfamily IFY67_00773 PF01725 Ham1 family IFY67_00774 PF02594 Uncharacterised ACR, YggU family COG1872 IFY67_00775 PF02325 YGGT family IFY67_00776 PF01168 Alanine racemase, N-terminal domain IFY67_00777 PF00437 Type II/IV secretion system protein IFY67_00778 PF00196 Bacterial regulatory proteins, luxR family IFY67_00779 PF03652 Holliday junction resolvase IFY67_00780 PF02622 Uncharacterized ACR, COG1678 IFY67_00781 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IFY67_00781 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IFY67_00782 PF04452 RNA methyltransferase IFY67_00783 PF04231 Endonuclease I IFY67_00784 PF10263 SprT-like family IFY67_00784 PF17283 SprT-like zinc ribbon domain IFY67_00785 PF00083 Sugar (and other) transporter IFY67_00786 PF00438 S-adenosylmethionine synthetase, N-terminal domain IFY67_00786 PF02772 S-adenosylmethionine synthetase, central domain IFY67_00786 PF02773 S-adenosylmethionine synthetase, C-terminal domain IFY67_00787 PF17810 Arginine decarboxylase helical bundle domain IFY67_00787 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IFY67_00787 PF17944 Arginine decarboxylase C-terminal helical extension IFY67_00788 PF00491 Arginase family IFY67_00789 PF01435 Peptidase family M48 IFY67_00790 PF02779 Transketolase, pyrimidine binding domain IFY67_00790 PF02780 Transketolase, C-terminal domain IFY67_00790 PF00456 Transketolase, thiamine diphosphate binding domain IFY67_00791 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IFY67_00791 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IFY67_00792 PF00162 Phosphoglycerate kinase IFY67_00793 PF01116 Fructose-bisphosphate aldolase class-II IFY67_00794 PF05552 Conserved TM helix IFY67_00794 PF00924 Mechanosensitive ion channel IFY67_00795 PF01810 LysE type translocator IFY67_00796 PF04402 Protein of unknown function (DUF541) IFY67_00797 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00797 PF03466 LysR substrate binding domain IFY67_00798 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IFY67_00799 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFY67_00799 PF01842 ACT domain IFY67_00799 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IFY67_00800 PF01812 5-formyltetrahydrofolate cyclo-ligase family IFY67_00801 PF05164 Cell division protein ZapA IFY67_00802 PF03695 Uncharacterised protein family (UPF0149) IFY67_00803 PF00557 Metallopeptidase family M24 IFY67_00803 PF05195 Aminopeptidase P, N-terminal domain IFY67_00804 PF01494 FAD binding domain IFY67_00805 PF01494 FAD binding domain IFY67_00806 PF08669 Glycine cleavage T-protein C-terminal barrel domain IFY67_00806 PF01571 Aminomethyltransferase folate-binding domain IFY67_00807 PF01597 Glycine cleavage H-protein IFY67_00808 PF02347 Glycine cleavage system P-protein IFY67_00810 PF00578 AhpC/TSA family IFY67_00814 PF00232 Glycosyl hydrolase family 1 IFY67_00815 PF01418 Helix-turn-helix domain, rpiR family IFY67_00815 PF01380 SIS domain IFY67_00816 PF04266 ASCH domain IFY67_00817 PF03006 Haemolysin-III related IFY67_00818 PF01571 Aminomethyltransferase folate-binding domain IFY67_00819 PF03937 Flavinator of succinate dehydrogenase IFY67_00820 PF07254 Membrane-bound toxin component of toxin-antitoxin system IFY67_00821 PF00258 Flavodoxin IFY67_00822 PF00589 Phage integrase family IFY67_00822 PF02899 Phage integrase, N-terminal SAM-like domain IFY67_00823 PF13098 Thioredoxin-like domain IFY67_00823 PF10411 Disulfide bond isomerase protein N-terminus IFY67_00824 PF02272 DHHA1 domain IFY67_00824 PF01368 DHH family IFY67_00824 PF17768 RecJ OB domain IFY67_00825 PF03462 PCRF domain IFY67_00825 PF00472 RF-1 domain IFY67_00826 PF01336 OB-fold nucleic acid binding domain IFY67_00826 PF00152 tRNA synthetases class II (D, K and N) IFY67_00827 PF00293 NUDIX domain IFY67_00828 PF01551 Peptidase family M23 IFY67_00828 PF01476 LysM domain IFY67_00830 PF07690 Major Facilitator Superfamily IFY67_00831 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00831 PF03466 LysR substrate binding domain IFY67_00833 PF00248 Aldo/keto reductase family IFY67_00834 PF02525 Flavodoxin-like fold IFY67_00836 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00836 PF03466 LysR substrate binding domain IFY67_00840 PF01022 Bacterial regulatory protein, arsR family IFY67_00841 PF02040 Arsenical pump membrane protein IFY67_00842 PF03960 ArsC family IFY67_00843 PF00854 POT family IFY67_00844 PF08986 Domain of unknown function (DUF1889) IFY67_00845 PF02321 Outer membrane efflux protein IFY67_00846 PF04632 Fusaric acid resistance protein family IFY67_00847 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_00847 PF00529 HlyD membrane-fusion protein of T1SS IFY67_00848 PF17090 Uncharacterised protein family IFY67_00849 PF06902 Divergent 4Fe-4S mono-cluster IFY67_00850 PF14542 GCN5-related N-acetyl-transferase IFY67_00852 PF00419 Fimbrial protein IFY67_00852 PF09160 FimH, mannose binding IFY67_00854 PF13954 PapC N-terminal domain IFY67_00854 PF13953 PapC C-terminal domain IFY67_00854 PF00577 Outer membrane usher protein IFY67_00855 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_00855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_00856 PF00419 Fimbrial protein IFY67_00857 PF00419 Fimbrial protein IFY67_00858 PF00589 Phage integrase family IFY67_00859 PF00589 Phage integrase family IFY67_00861 PF03824 High-affinity nickel-transport protein IFY67_00862 PF01047 MarR family IFY67_00863 PF00892 EamA-like transporter family IFY67_00865 PF00419 Fimbrial protein IFY67_00866 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_00866 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_00867 PF13954 PapC N-terminal domain IFY67_00867 PF00577 Outer membrane usher protein IFY67_00867 PF13953 PapC C-terminal domain IFY67_00868 PF00419 Fimbrial protein IFY67_00869 PF00419 Fimbrial protein IFY67_00872 PF00196 Bacterial regulatory proteins, luxR family IFY67_00872 PF00072 Response regulator receiver domain IFY67_00874 PF00248 Aldo/keto reductase family IFY67_00875 PF03222 Tryptophan/tyrosine permease family IFY67_00877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00877 PF03466 LysR substrate binding domain IFY67_00878 PF00108 Thiolase, N-terminal domain IFY67_00878 PF02803 Thiolase, C-terminal domain IFY67_00879 PF06178 Oligogalacturonate-specific porin protein (KdgM) IFY67_00880 PF14583 Oligogalacturonate lyase IFY67_00884 PF00083 Sugar (and other) transporter IFY67_00885 PF00356 Bacterial regulatory proteins, lacI family IFY67_00885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IFY67_00886 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IFY67_00886 PF00356 Bacterial regulatory proteins, lacI family IFY67_00887 PF01306 LacY proton/sugar symporter IFY67_00888 PF00251 Glycosyl hydrolases family 32 N-terminal domain IFY67_00888 PF08244 Glycosyl hydrolases family 32 C terminal IFY67_00891 PF00005 ABC transporter IFY67_00891 PF17912 MalK OB fold domain IFY67_00892 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00893 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00894 PF16867 Dimethlysulfonioproprionate lyase IFY67_00895 PF01177 Asp/Glu/Hydantoin racemase IFY67_00896 PF03466 LysR substrate binding domain IFY67_00896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00897 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IFY67_00897 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IFY67_00898 PF00356 Bacterial regulatory proteins, lacI family IFY67_00899 PF02378 Phosphotransferase system, EIIC IFY67_00900 PF00232 Glycosyl hydrolase family 1 IFY67_00901 PF07729 FCD domain IFY67_00901 PF00392 Bacterial regulatory proteins, gntR family IFY67_00903 PF00356 Bacterial regulatory proteins, lacI family IFY67_00904 PF01553 Acyltransferase IFY67_00904 PF00501 AMP-binding enzyme IFY67_00905 PF01553 Acyltransferase IFY67_00905 PF00501 AMP-binding enzyme IFY67_00906 PF07690 Major Facilitator Superfamily IFY67_00907 PF00248 Aldo/keto reductase family IFY67_00908 PF06004 Bacterial protein of unknown function (DUF903) IFY67_00909 PF03741 Integral membrane protein TerC family IFY67_00910 PF02976 DNA mismatch repair enzyme MutH IFY67_00911 PF00293 NUDIX domain IFY67_00912 PF02896 PEP-utilising enzyme, TIM barrel domain IFY67_00912 PF00391 PEP-utilising enzyme, mobile domain IFY67_00912 PF05524 PEP-utilising enzyme, N-terminal IFY67_00912 PF01590 GAF domain IFY67_00913 PF01790 Prolipoprotein diacylglyceryl transferase IFY67_00914 PF00303 Thymidylate synthase IFY67_00915 PF07963 Prokaryotic N-terminal methylation motif IFY67_00916 PF10713 Protein of unknown function (DUF2509) IFY67_00917 PF12528 Type II secretion prepilin peptidase dependent protein C IFY67_00917 PF07963 Prokaryotic N-terminal methylation motif IFY67_00918 PF17946 RecC C-terminal domain IFY67_00919 PF00675 Insulinase (Peptidase family M16) IFY67_00919 PF16187 Middle or third domain of peptidase_M16 IFY67_00919 PF05193 Peptidase M16 inactive domain IFY67_00920 PF13361 UvrD-like helicase C-terminal domain IFY67_00920 PF00580 UvrD/REP helicase N-terminal domain IFY67_00920 PF12705 PD-(D/E)XK nuclease superfamily IFY67_00921 PF13538 UvrD-like helicase C-terminal domain IFY67_00923 PF00583 Acetyltransferase (GNAT) family IFY67_00923 PF00696 Amino acid kinase family IFY67_00924 PF01520 N-acetylmuramoyl-L-alanine amidase IFY67_00924 PF11741 AMIN domain IFY67_00925 PF00155 Aminotransferase class I and II IFY67_00926 PF00288 GHMP kinases N terminal domain IFY67_00927 PF00871 Acetokinase family IFY67_00928 PF10662 Ethanolamine utilisation - propanediol utilisation IFY67_00929 PF00936 BMC domain IFY67_00931 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IFY67_00931 PF13375 RnfC Barrel sandwich hybrid domain IFY67_00931 PF13237 4Fe-4S dicluster domain IFY67_00931 PF10531 SLBB domain IFY67_00932 PF00171 Aldehyde dehydrogenase family IFY67_00932 PF00465 Iron-containing alcohol dehydrogenase IFY67_00933 PF00171 Aldehyde dehydrogenase family IFY67_00934 PF00171 Aldehyde dehydrogenase family IFY67_00935 PF00171 Aldehyde dehydrogenase family IFY67_00936 PF01923 Cobalamin adenosyltransferase IFY67_00937 PF03319 Ethanolamine utilisation protein EutN/carboxysome IFY67_00939 PF06130 Phosphate propanoyltransferase IFY67_00940 PF00936 BMC domain IFY67_00941 PF00936 BMC domain IFY67_00943 PF08841 Diol dehydratase reactivase ATPase-like domain IFY67_00943 PF18427 DD-reactivating factor swiveling domain IFY67_00944 PF08841 Diol dehydratase reactivase ATPase-like domain IFY67_00944 PF18427 DD-reactivating factor swiveling domain IFY67_00945 PF02287 Dehydratase small subunit IFY67_00946 PF02288 Dehydratase medium subunit IFY67_00947 PF02286 Dehydratase large subunit IFY67_00948 PF00936 BMC domain IFY67_00949 PF00936 BMC domain IFY67_00950 PF00230 Major intrinsic protein IFY67_00951 PF10114 Sensory domain found in PocR IFY67_00951 PF12833 Helix-turn-helix domain IFY67_00952 PF07685 CobB/CobQ-like glutamine amidotransferase domain IFY67_00952 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IFY67_00953 PF03186 CobD/Cbib protein IFY67_00954 PF02570 Precorrin-8X methylmutase IFY67_00955 PF01888 CbiD IFY67_00956 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFY67_00957 PF05175 Methyltransferase small domain IFY67_00958 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFY67_00959 PF11761 Cobalamin biosynthesis central region IFY67_00959 PF01890 Cobalamin synthesis G C-terminus IFY67_00959 PF11760 Cobalamin synthesis G N-terminal IFY67_00960 PF11761 Cobalamin biosynthesis central region IFY67_00960 PF11760 Cobalamin synthesis G N-terminal IFY67_00960 PF01890 Cobalamin synthesis G C-terminus IFY67_00961 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFY67_00962 PF02571 Precorrin-6x reductase CbiJ/CobK IFY67_00963 PF06180 Cobalt chelatase (CbiK) IFY67_00964 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFY67_00965 PF01891 Cobalt uptake substrate-specific transmembrane region IFY67_00966 PF02553 Cobalt transport protein component CbiN IFY67_00967 PF02361 Cobalt transport protein IFY67_00968 PF00005 ABC transporter IFY67_00969 PF07685 CobB/CobQ-like glutamine amidotransferase domain IFY67_00970 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IFY67_00971 PF02277 Phosphoribosyltransferase IFY67_00975 PF06725 3D domain IFY67_00975 PF03562 MltA specific insert domain IFY67_00976 PF00899 ThiF family IFY67_00977 PF02657 Fe-S metabolism associated domain IFY67_00978 PF00266 Aminotransferase class-V IFY67_00979 PF06004 Bacterial protein of unknown function (DUF903) IFY67_00980 PF03466 LysR substrate binding domain IFY67_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_00981 PF04241 Protein of unknown function (DUF423) IFY67_00982 PF01728 FtsJ-like methyltransferase IFY67_00982 PF18125 RlmM ferredoxin-like domain IFY67_00983 PF00455 DeoR C terminal sensor domain IFY67_00983 PF08220 DeoR-like helix-turn-helix domain IFY67_00984 PF05025 RbsD / FucU transport protein family IFY67_00985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_00985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_00986 PF07882 L-fucose isomerase, second N-terminal domain IFY67_00986 PF02952 L-fucose isomerase, C-terminal domain IFY67_00986 PF07881 L-fucose isomerase, first N-terminal domain IFY67_00987 PF07690 Major Facilitator Superfamily IFY67_00988 PF00596 Class II Aldolase and Adducin N-terminal domain IFY67_00989 PF00465 Iron-containing alcohol dehydrogenase IFY67_00990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IFY67_00990 PF01367 5'-3' exonuclease, C-terminal SAM fold IFY67_00991 PF00158 Sigma-54 interaction domain IFY67_00992 PF00296 Luciferase-like monooxygenase IFY67_00994 PF00296 Luciferase-like monooxygenase IFY67_00995 PF00005 ABC transporter IFY67_00997 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_00998 PF03180 NLPA lipoprotein IFY67_01000 PF07690 Major Facilitator Superfamily IFY67_01002 PF09084 NMT1/THI5 like IFY67_01003 PF03313 Serine dehydratase alpha chain IFY67_01003 PF03315 Serine dehydratase beta chain IFY67_01005 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IFY67_01005 PF03641 Possible lysine decarboxylase IFY67_01005 PF11892 Domain of unknown function (DUF3412) IFY67_01006 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IFY67_01006 PF14489 QueF-like protein IFY67_01007 PF07348 Syd protein (SUKH-2) IFY67_01008 PF04287 tRNA pseudouridine synthase C IFY67_01009 PF00849 RNA pseudouridylate synthase IFY67_01010 PF00258 Flavodoxin IFY67_01011 PF07690 Major Facilitator Superfamily IFY67_01012 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IFY67_01012 PF13378 Enolase C-terminal domain-like IFY67_01013 PF13378 Enolase C-terminal domain-like IFY67_01014 PF02595 Glycerate kinase family IFY67_01015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IFY67_01015 PF00512 His Kinase A (phospho-acceptor) domain IFY67_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_01015 PF00672 HAMP domain IFY67_01015 PF00072 Response regulator receiver domain IFY67_01015 PF01627 Hpt domain IFY67_01016 PF01938 TRAM domain IFY67_01016 PF05958 tRNA (Uracil-5-)-methyltransferase IFY67_01017 PF04607 Region found in RelA / SpoT proteins IFY67_01017 PF02824 TGS domain IFY67_01017 PF13291 ACT domain IFY67_01018 PF03819 MazG nucleotide pyrophosphohydrolase domain IFY67_01019 PF00117 Glutamine amidotransferase class-I IFY67_01019 PF06418 CTP synthase N-terminus IFY67_01020 PF03952 Enolase, N-terminal domain IFY67_01020 PF00113 Enolase, C-terminal TIM barrel domain IFY67_01022 PF04055 Radical SAM superfamily IFY67_01023 PF01242 6-pyruvoyl tetrahydropterin synthase IFY67_01024 PF00667 FAD binding domain IFY67_01024 PF00258 Flavodoxin IFY67_01024 PF00175 Oxidoreductase NAD-binding domain IFY67_01025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IFY67_01025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IFY67_01026 PF01507 Phosphoadenosine phosphosulfate reductase family IFY67_01027 PF04389 Peptidase family M28 IFY67_01028 PF14824 Sirohaem biosynthesis protein central IFY67_01028 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFY67_01028 PF10414 Sirohaem synthase dimerisation region IFY67_01029 PF01507 Phosphoadenosine phosphosulfate reductase family IFY67_01030 PF00009 Elongation factor Tu GTP binding domain IFY67_01032 PF12084 Protein of unknown function (DUF3561) IFY67_01033 PF04977 Septum formation initiator IFY67_01034 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IFY67_01035 PF02542 YgbB family IFY67_01036 PF01142 tRNA pseudouridine synthase D (TruD) IFY67_01037 PF01975 Survival protein SurE IFY67_01039 PF01551 Peptidase family M23 IFY67_01039 PF01476 LysM domain IFY67_01040 PF00140 Sigma-70 factor, region 1.2 IFY67_01040 PF04542 Sigma-70 region 2 IFY67_01040 PF04539 Sigma-70 region 3 IFY67_01040 PF04545 Sigma-70, region 4 IFY67_01042 PF07690 Major Facilitator Superfamily IFY67_01043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01043 PF03466 LysR substrate binding domain IFY67_01044 PF01047 MarR family IFY67_01045 PF02441 Flavoprotein IFY67_01046 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IFY67_01048 PF01848 Hok/gef family IFY67_01049 PF01624 MutS domain I IFY67_01049 PF05188 MutS domain II IFY67_01049 PF05192 MutS domain III IFY67_01049 PF05190 MutS family domain IV IFY67_01049 PF00488 MutS domain V IFY67_01050 PF00005 ABC transporter IFY67_01051 PF01032 FecCD transport family IFY67_01052 PF01497 Periplasmic binding protein IFY67_01053 PF05171 Haemin-degrading HemS.ChuX domain IFY67_01054 PF00593 TonB dependent receptor IFY67_01054 PF07715 TonB-dependent Receptor Plug Domain IFY67_01056 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_01056 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_01056 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_01057 PF03547 Membrane transport protein IFY67_01059 PF11756 Nitrous oxide-stimulated promoter IFY67_01060 PF00950 ABC 3 transport family IFY67_01061 PF00950 ABC 3 transport family IFY67_01062 PF00005 ABC transporter IFY67_01063 PF01297 Zinc-uptake complex component A periplasmic IFY67_01064 PF00356 Bacterial regulatory proteins, lacI family IFY67_01065 PF00480 ROK family IFY67_01066 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IFY67_01067 PF02378 Phosphotransferase system, EIIC IFY67_01068 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_01069 PF02378 Phosphotransferase system, EIIC IFY67_01070 PF02264 LamB porin IFY67_01074 PF00232 Glycosyl hydrolase family 1 IFY67_01075 PF01590 GAF domain IFY67_01075 PF02954 Bacterial regulatory protein, Fis family IFY67_01075 PF00158 Sigma-54 interaction domain IFY67_01076 PF00586 AIR synthase related protein, N-terminal domain IFY67_01076 PF02769 AIR synthase related protein, C-terminal domain IFY67_01077 PF01924 Hydrogenase formation hypA family IFY67_01078 PF01455 HupF/HypC family IFY67_01079 PF02492 CobW/HypB/UreG, nucleotide-binding domain IFY67_01080 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IFY67_01081 PF11046 Transcriptional repressor of hyc and hyp operons IFY67_01082 PF13247 4Fe-4S dicluster domain IFY67_01083 PF00361 Proton-conducting membrane transporter IFY67_01084 PF00146 NADH dehydrogenase IFY67_01085 PF00146 NADH dehydrogenase IFY67_01086 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IFY67_01086 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IFY67_01086 PF00374 Nickel-dependent hydrogenase IFY67_01087 PF12838 4Fe-4S dicluster domain IFY67_01088 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IFY67_01089 PF07450 Formate hydrogenlyase maturation protein HycH IFY67_01090 PF01750 Hydrogenase maturation protease IFY67_01091 PF08845 Toxin SymE, type I toxin-antitoxin system IFY67_01092 PF00232 Glycosyl hydrolase family 1 IFY67_01093 PF00367 phosphotransferase system, EIIB IFY67_01093 PF02378 Phosphotransferase system, EIIC IFY67_01094 PF00356 Bacterial regulatory proteins, lacI family IFY67_01095 PF12800 4Fe-4S binding domain IFY67_01095 PF13247 4Fe-4S dicluster domain IFY67_01096 PF01300 Telomere recombination IFY67_01096 PF00708 Acylphosphatase IFY67_01096 PF17788 HypF Kae1-like domain IFY67_01096 PF07503 HypF finger IFY67_01097 PF03824 High-affinity nickel-transport protein IFY67_01098 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_01098 PF18113 Rubredoxin binding C-terminal domain IFY67_01099 PF00258 Flavodoxin IFY67_01099 PF00753 Metallo-beta-lactamase superfamily IFY67_01099 PF00301 Rubredoxin IFY67_01100 PF01590 GAF domain IFY67_01100 PF00158 Sigma-54 interaction domain IFY67_01101 PF00571 CBS domain IFY67_01101 PF01380 SIS domain IFY67_01102 PF08220 DeoR-like helix-turn-helix domain IFY67_01102 PF00455 DeoR C terminal sensor domain IFY67_01103 PF06923 Glucitol operon activator protein (GutM) IFY67_01104 PF00106 short chain dehydrogenase IFY67_01105 PF03829 PTS system glucitol/sorbitol-specific IIA component IFY67_01106 PF07663 Sorbitol phosphotransferase enzyme II C-terminus IFY67_01106 PF03612 Sorbitol phosphotransferase enzyme II N-terminus IFY67_01107 PF03608 PTS system enzyme II sorbitol-specific factor IFY67_01108 PF13406 Transglycosylase SLT domain IFY67_01109 PF00005 ABC transporter IFY67_01110 PF00950 ABC 3 transport family IFY67_01111 PF01297 Zinc-uptake complex component A periplasmic IFY67_01112 PF02464 Competence-damaged protein IFY67_01113 PF00154 recA bacterial DNA recombination protein IFY67_01114 PF02631 RecX family IFY67_01115 PF01411 tRNA synthetases class II (A) IFY67_01115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IFY67_01115 PF02272 DHHA1 domain IFY67_01116 PF02599 Global regulator protein family IFY67_01122 PF04972 BON domain IFY67_01123 PF13419 Haloacid dehalogenase-like hydrolase IFY67_01124 PF09335 SNARE associated Golgi protein IFY67_01125 PF04262 Glutamate-cysteine ligase IFY67_01126 PF02664 S-Ribosylhomocysteinase (LuxS) IFY67_01127 PF12833 Helix-turn-helix domain IFY67_01127 PF12852 Cupin IFY67_01128 PF08502 LeuA allosteric (dimerisation) domain IFY67_01128 PF00682 HMGL-like IFY67_01129 PF07690 Major Facilitator Superfamily IFY67_01130 PF00529 HlyD membrane-fusion protein of T1SS IFY67_01130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_01131 PF01047 MarR family IFY67_01132 PF05437 Branched-chain amino acid transport protein (AzlD) IFY67_01133 PF03591 AzlC protein IFY67_01134 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IFY67_01135 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01136 PF00005 ABC transporter IFY67_01136 PF00571 CBS domain IFY67_01137 PF00268 Ribonucleotide reductase, small chain IFY67_01138 PF00317 Ribonucleotide reductase, all-alpha domain IFY67_01138 PF08343 Ribonucleotide reductase N-terminal IFY67_01138 PF02867 Ribonucleotide reductase, barrel domain IFY67_01139 PF07972 NrdI Flavodoxin like IFY67_01140 PF00462 Glutaredoxin IFY67_01141 PF02627 Carboxymuconolactone decarboxylase family IFY67_01142 PF00392 Bacterial regulatory proteins, gntR family IFY67_01142 PF00155 Aminotransferase class I and II IFY67_01143 PF05957 Bacterial protein of unknown function (DUF883) IFY67_01144 PF09400 Protein of unknown function (DUF2002) IFY67_01145 PF06610 L-alanine exporter IFY67_01146 PF00816 H-NS histone family IFY67_01149 PF00581 Rhodanese-like domain IFY67_01149 PF11127 Protein of unknown function (DUF2892) IFY67_01150 PF01022 Bacterial regulatory protein, arsR family IFY67_01151 PF02525 Flavodoxin-like fold IFY67_01152 PF03466 LysR substrate binding domain IFY67_01152 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01153 PF01590 GAF domain IFY67_01153 PF00158 Sigma-54 interaction domain IFY67_01153 PF02954 Bacterial regulatory protein, Fis family IFY67_01154 PF00171 Aldehyde dehydrogenase family IFY67_01155 PF16970 Type-1 fimbrial protein, A IFY67_01156 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_01156 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_01157 PF13954 PapC N-terminal domain IFY67_01157 PF00577 Outer membrane usher protein IFY67_01157 PF13953 PapC C-terminal domain IFY67_01158 PF13954 PapC N-terminal domain IFY67_01158 PF00577 Outer membrane usher protein IFY67_01158 PF13953 PapC C-terminal domain IFY67_01161 PF13954 PapC N-terminal domain IFY67_01161 PF13953 PapC C-terminal domain IFY67_01161 PF00577 Outer membrane usher protein IFY67_01162 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_01162 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_01163 PF00419 Fimbrial protein IFY67_01164 PF00196 Bacterial regulatory proteins, luxR family IFY67_01164 PF00072 Response regulator receiver domain IFY67_01167 PF00106 short chain dehydrogenase IFY67_01168 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFY67_01169 PF00596 Class II Aldolase and Adducin N-terminal domain IFY67_01170 PF00005 ABC transporter IFY67_01171 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_01174 PF00491 Arginase family IFY67_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01175 PF03466 LysR substrate binding domain IFY67_01177 PF00873 AcrB/AcrD/AcrF family IFY67_01178 PF00529 HlyD membrane-fusion protein of T1SS IFY67_01178 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_01179 PF06445 GyrI-like small molecule binding domain IFY67_01179 PF12833 Helix-turn-helix domain IFY67_01181 PF03466 LysR substrate binding domain IFY67_01181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01184 PF01668 SmpB protein IFY67_01185 PF03364 Polyketide cyclase / dehydrase and lipid transport IFY67_01186 PF03658 RnfH family Ubiquitin IFY67_01187 PF04355 SmpA / OmlA family IFY67_01188 PF02463 RecF/RecN/SMC N terminal domain IFY67_01189 PF01513 ATP-NAD kinase IFY67_01190 PF01025 GrpE IFY67_01191 PF01595 Cyclin M transmembrane N-terminal domain IFY67_01191 PF00571 CBS domain IFY67_01191 PF03471 Transporter associated domain IFY67_01192 PF01578 Cytochrome C assembly protein IFY67_01193 PF02881 SRP54-type protein, helical bundle domain IFY67_01193 PF00448 SRP54-type protein, GTPase domain IFY67_01193 PF02978 Signal peptide binding domain IFY67_01194 PF00886 Ribosomal protein S16 IFY67_01195 PF01782 RimM N-terminal domain IFY67_01195 PF05239 PRC-barrel domain IFY67_01196 PF01746 tRNA (Guanine-1)-methyltransferase IFY67_01197 PF01245 Ribosomal protein L19 IFY67_01200 PF00691 OmpA family IFY67_01201 PF00990 Diguanylate cyclase, GGDEF domain IFY67_01201 PF17152 Periplasmic sensor domain IFY67_01202 PF13689 YfiR/HmsC-like IFY67_01203 PF00793 DAHP synthetase I family IFY67_01204 PF01817 Chorismate mutase type II IFY67_01204 PF02153 Prephenate dehydrogenase IFY67_01205 PF08450 SMP-30/Gluconolactonase/LRE-like region IFY67_01206 PF01817 Chorismate mutase type II IFY67_01206 PF00800 Prephenate dehydratase IFY67_01207 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IFY67_01208 PF13525 Outer membrane lipoprotein IFY67_01209 PF00849 RNA pseudouridylate synthase IFY67_01209 PF01479 S4 domain IFY67_01210 PF02578 Multi-copper polyphenol oxidoreductase laccase IFY67_01211 PF10431 C-terminal, D2-small domain, of ClpB protein IFY67_01211 PF17871 AAA lid domain IFY67_01211 PF02861 Clp amino terminal domain, pathogenicity island component IFY67_01211 PF07724 AAA domain (Cdc48 subfamily) IFY67_01211 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_01216 PF00083 Sugar (and other) transporter IFY67_01217 PF10043 Predicted periplasmic lipoprotein (DUF2279) IFY67_01218 PF13091 PLD-like domain IFY67_01219 PF13607 Succinyl-CoA ligase like flavodoxin domain IFY67_01219 PF00583 Acetyltransferase (GNAT) family IFY67_01219 PF13380 CoA binding domain IFY67_01220 PF03942 DTW domain IFY67_01221 PF00085 Thioredoxin IFY67_01222 PF00588 SpoU rRNA Methylase family IFY67_01222 PF08032 RNA 2'-O ribose methyltransferase substrate binding IFY67_01223 PF03167 Uracil DNA glycosylase superfamily IFY67_01224 PF01228 Glycine radical IFY67_01225 PF00270 DEAD/DEAH box helicase IFY67_01225 PF00271 Helicase conserved C-terminal domain IFY67_01226 PF05175 Methyltransferase small domain IFY67_01227 PF00890 FAD binding domain IFY67_01227 PF02910 Fumarate reductase flavoprotein C-term IFY67_01228 PF08281 Sigma-70, region 4 IFY67_01228 PF04542 Sigma-70 region 2 IFY67_01229 PF03872 Anti sigma-E protein RseA, N-terminal domain IFY67_01229 PF03873 Anti sigma-E protein RseA, C-terminal domain IFY67_01230 PF03888 MucB/RseB N-terminal domain IFY67_01230 PF17188 MucB/RseB C-terminal domain IFY67_01232 PF03144 Elongation factor Tu domain 2 IFY67_01232 PF00009 Elongation factor Tu GTP binding domain IFY67_01232 PF00679 Elongation factor G C-terminus IFY67_01232 PF06421 GTP-binding protein LepA C-terminus IFY67_01233 PF10502 Signal peptidase, peptidase S26 IFY67_01234 PF14622 Ribonuclease-III-like IFY67_01234 PF00035 Double-stranded RNA binding motif IFY67_01235 PF07650 KH domain IFY67_01235 PF01926 50S ribosome-binding GTPase IFY67_01236 PF11967 Recombination protein O N terminal IFY67_01236 PF02565 Recombination protein O C terminal IFY67_01237 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IFY67_01238 PF01648 4'-phosphopantetheinyl transferase superfamily IFY67_01239 PF12838 4Fe-4S dicluster domain IFY67_01240 PF01418 Helix-turn-helix domain, rpiR family IFY67_01240 PF01380 SIS domain IFY67_01242 PF14437 MafB19-like deaminase IFY67_01243 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_01243 PF01464 Transglycosylase SLT domain IFY67_01244 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IFY67_01244 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IFY67_01244 PF02769 AIR synthase related protein, C-terminal domain IFY67_01245 PF00512 His Kinase A (phospho-acceptor) domain IFY67_01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_01246 PF13942 YfhG lipoprotein IFY67_01247 PF00072 Response regulator receiver domain IFY67_01247 PF00158 Sigma-54 interaction domain IFY67_01248 PF00543 Nitrogen regulatory protein P-II IFY67_01249 PF00970 Oxidoreductase FAD-binding domain IFY67_01249 PF00175 Oxidoreductase NAD-binding domain IFY67_01249 PF00042 Globin IFY67_01250 PF00464 Serine hydroxymethyltransferase IFY67_01251 PF07681 DoxX IFY67_01252 PF00480 ROK family IFY67_01253 PF17128 Domain of unknown function (DUF5107) IFY67_01253 PF13181 Tetratricopeptide repeat IFY67_01254 PF00083 Sugar (and other) transporter IFY67_01255 PF01263 Aldose 1-epimerase IFY67_01256 PF12832 MFS_1 like family IFY67_01257 PF12832 MFS_1 like family IFY67_01258 PF00874 PRD domain IFY67_01259 PF06226 Protein of unknown function (DUF1007) IFY67_01260 PF03824 High-affinity nickel-transport protein IFY67_01262 PF00459 Inositol monophosphatase family IFY67_01263 PF00588 SpoU rRNA Methylase family IFY67_01264 PF02082 Transcriptional regulator IFY67_01265 PF00266 Aminotransferase class-V IFY67_01266 PF01592 NifU-like N terminal domain IFY67_01267 PF01521 Iron-sulphur cluster biosynthesis IFY67_01268 PF07743 HSCB C-terminal oligomerisation domain IFY67_01268 PF00226 DnaJ domain IFY67_01269 PF00012 Hsp70 protein IFY67_01270 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_01271 PF04384 Iron-sulphur cluster assembly IFY67_01272 PF12404 Peptidase IFY67_01272 PF00883 Cytosol aminopeptidase family, catalytic domain IFY67_01273 PF14581 SseB protein C-terminal domain IFY67_01273 PF07179 SseB protein N-terminal domain IFY67_01275 PF00581 Rhodanese-like domain IFY67_01276 PF07703 Alpha-2-macroglobulin bait region domain IFY67_01276 PF17962 Bacterial macroglobulin domain 6 IFY67_01276 PF01835 MG2 domain IFY67_01276 PF07678 A-macroglobulin TED domain IFY67_01276 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain IFY67_01276 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IFY67_01276 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IFY67_01276 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IFY67_01276 PF00207 Alpha-2-macroglobulin family IFY67_01277 PF00912 Transglycosylase IFY67_01277 PF00905 Penicillin binding protein transpeptidase domain IFY67_01277 PF06832 Penicillin-Binding Protein C-terminus Family IFY67_01278 PF00334 Nucleoside diphosphate kinase IFY67_01279 PF04055 Radical SAM superfamily IFY67_01280 PF13464 Domain of unknown function (DUF4115) IFY67_01281 PF04551 GcpE protein IFY67_01282 PF03129 Anticodon binding domain IFY67_01282 PF13393 Histidyl-tRNA synthetase IFY67_01283 PF09976 Tetratricopeptide repeat-like domain IFY67_01284 PF13360 PQQ-like domain IFY67_01285 PF01926 50S ribosome-binding GTPase IFY67_01285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IFY67_01287 PF07191 zinc-ribbons IFY67_01288 PF02601 Exonuclease VII, large subunit IFY67_01288 PF13742 OB-fold nucleic acid binding domain IFY67_01289 PF00478 IMP dehydrogenase / GMP reductase domain IFY67_01289 PF00571 CBS domain IFY67_01290 PF00958 GMP synthase C terminal domain IFY67_01290 PF00117 Glutamine amidotransferase class-I IFY67_01290 PF02540 NAD synthase IFY67_01291 PF00884 Sulfatase IFY67_01292 PF04055 Radical SAM superfamily IFY67_01292 PF13186 Iron-sulfur cluster-binding domain IFY67_01294 PF03466 LysR substrate binding domain IFY67_01294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01295 PF11119 Protein of unknown function (DUF2633) IFY67_01296 PF00563 EAL domain IFY67_01296 PF05231 MASE1 IFY67_01297 PF02541 Ppx/GppA phosphatase family IFY67_01298 PF13089 Polyphosphate kinase N-terminal domain IFY67_01298 PF17941 Polyphosphate kinase C-terminal domain 1 IFY67_01298 PF13090 Polyphosphate kinase C-terminal domain 2 IFY67_01298 PF02503 Polyphosphate kinase middle domain IFY67_01299 PF00551 Formyl transferase IFY67_01300 PF00586 AIR synthase related protein, N-terminal domain IFY67_01300 PF02769 AIR synthase related protein, C-terminal domain IFY67_01301 PF00480 ROK family IFY67_01302 PF00232 Glycosyl hydrolase family 1 IFY67_01304 PF00860 Permease family IFY67_01305 PF00308 Bacterial dnaA protein IFY67_01306 PF04754 Putative transposase, YhgA-like IFY67_01307 PF03960 ArsC family IFY67_01308 PF01435 Peptidase family M48 IFY67_01309 PF01594 AI-2E family transporter IFY67_01310 PF00578 AhpC/TSA family IFY67_01311 PF01842 ACT domain IFY67_01312 PF00701 Dihydrodipicolinate synthetase family IFY67_01313 PF06804 NlpB/DapX lipoprotein IFY67_01314 PF01259 SAICAR synthetase IFY67_01315 PF04228 Putative neutral zinc metallopeptidase IFY67_01316 PF08351 Domain of unknown function (DUF1726) IFY67_01316 PF17176 tRNA-binding domain IFY67_01316 PF13718 GNAT acetyltransferase 2 IFY67_01316 PF05127 Helicase IFY67_01317 PF02230 Phospholipase/Carboxylesterase IFY67_01318 PF13980 Uncharacterised protein family (UPF0370) IFY67_01319 PF07687 Peptidase dimerisation domain IFY67_01319 PF01546 Peptidase family M20/M25/M40 IFY67_01320 PF03960 ArsC family IFY67_01321 PF00873 AcrB/AcrD/AcrF family IFY67_01322 PF13247 4Fe-4S dicluster domain IFY67_01322 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_01322 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IFY67_01323 PF00293 NUDIX domain IFY67_01324 PF06674 Protein of unknown function (DUF1176) IFY67_01325 PF02780 Transketolase, C-terminal domain IFY67_01325 PF02779 Transketolase, pyrimidine binding domain IFY67_01325 PF00456 Transketolase, thiamine diphosphate binding domain IFY67_01326 PF00923 Transaldolase/Fructose-6-phosphate aldolase IFY67_01327 PF01515 Phosphate acetyl/butaryl transferase IFY67_01327 PF03949 Malic enzyme, NAD binding domain IFY67_01327 PF00390 Malic enzyme, N-terminal domain IFY67_01328 PF00936 BMC domain IFY67_01329 PF10662 Ethanolamine utilisation - propanediol utilisation IFY67_01330 PF06249 Ethanolamine utilisation protein EutQ IFY67_01331 PF01923 Cobalamin adenosyltransferase IFY67_01332 PF01515 Phosphate acetyl/butaryl transferase IFY67_01333 PF00936 BMC domain IFY67_01334 PF03319 Ethanolamine utilisation protein EutN/carboxysome IFY67_01335 PF00171 Aldehyde dehydrogenase family IFY67_01337 PF00465 Iron-containing alcohol dehydrogenase IFY67_01338 PF04346 Ethanolamine utilisation protein, EutH IFY67_01339 PF06277 Ethanolamine utilisation protein EutA IFY67_01340 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IFY67_01341 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IFY67_01342 PF00936 BMC domain IFY67_01343 PF16365 Ethanolamine utilization protein EutK C-terminus IFY67_01343 PF00936 BMC domain IFY67_01344 PF12833 Helix-turn-helix domain IFY67_01345 PF01218 Coproporphyrinogen III oxidase IFY67_01346 PF01520 N-acetylmuramoyl-L-alanine amidase IFY67_01347 PF00583 Acetyltransferase (GNAT) family IFY67_01348 PF11143 Protein of unknown function (DUF2919) IFY67_01349 PF06572 Protein of unknown function (DUF1131) IFY67_01350 PF04261 Dyp-type peroxidase family IFY67_01352 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01353 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01354 PF00005 ABC transporter IFY67_01355 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_01356 PF13474 SnoaL-like domain IFY67_01357 PF00155 Aminotransferase class I and II IFY67_01357 PF00392 Bacterial regulatory proteins, gntR family IFY67_01358 PF08543 Phosphomethylpyrimidine kinase IFY67_01360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IFY67_01361 PF05524 PEP-utilising enzyme, N-terminal IFY67_01361 PF00391 PEP-utilising enzyme, mobile domain IFY67_01361 PF02896 PEP-utilising enzyme, TIM barrel domain IFY67_01362 PF00381 PTS HPr component phosphorylation site IFY67_01363 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_01365 PF04354 ZipA, C-terminal FtsZ-binding domain IFY67_01366 PF00533 BRCA1 C Terminus (BRCT) domain IFY67_01366 PF12826 Helix-hairpin-helix motif IFY67_01366 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IFY67_01366 PF03120 NAD-dependent DNA ligase OB-fold domain IFY67_01366 PF01653 NAD-dependent DNA ligase adenylation domain IFY67_01367 PF12843 Putative quorum-sensing-regulated virulence factor IFY67_01368 PF13593 SBF-like CPA transporter family (DUF4137) IFY67_01369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01369 PF03466 LysR substrate binding domain IFY67_01374 PF00749 tRNA synthetases class I (E and Q), catalytic domain IFY67_01375 PF07037 Putative transcription regulator (DUF1323) IFY67_01376 PF07037 Putative transcription regulator (DUF1323) IFY67_01379 PF00563 EAL domain IFY67_01379 PF05231 MASE1 IFY67_01380 PF01773 Na+ dependent nucleoside transporter N-terminus IFY67_01380 PF07662 Na+ dependent nucleoside transporter C-terminus IFY67_01380 PF07670 Nucleoside recognition IFY67_01381 PF01566 Natural resistance-associated macrophage protein IFY67_01382 PF10697 Protein of unknown function (DUF2502) IFY67_01383 PF00248 Aldo/keto reductase family IFY67_01384 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_01384 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_01384 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_01385 PF00654 Voltage gated chloride channel IFY67_01386 PF02685 Glucokinase IFY67_01387 PF04397 LytTr DNA-binding domain IFY67_01387 PF00072 Response regulator receiver domain IFY67_01388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_01388 PF06580 Histidine kinase IFY67_01388 PF07694 5TMR of 5TMR-LYT IFY67_01389 PF00155 Aminotransferase class I and II IFY67_01390 PF07690 Major Facilitator Superfamily IFY67_01391 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IFY67_01392 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01392 PF03466 LysR substrate binding domain IFY67_01396 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IFY67_01399 PF13488 Glycine zipper IFY67_01399 PF00691 OmpA family IFY67_01402 PF13296 Putative type VI secretion system Rhs element Vgr IFY67_01402 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IFY67_01402 PF04717 Type VI secretion system, phage-baseplate injector IFY67_01418 PF04717 Type VI secretion system, phage-baseplate injector IFY67_01422 PF01226 Formate/nitrite transporter IFY67_01423 PF04333 MlaA lipoprotein IFY67_01424 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IFY67_01425 PF04175 Protein of unknown function (DUF406) IFY67_01426 PF02803 Thiolase, C-terminal domain IFY67_01426 PF00108 Thiolase, N-terminal domain IFY67_01427 PF02803 Thiolase, C-terminal domain IFY67_01427 PF00108 Thiolase, N-terminal domain IFY67_01428 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IFY67_01428 PF00378 Enoyl-CoA hydratase/isomerase IFY67_01428 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IFY67_01429 PF00300 Histidine phosphatase superfamily (branch 1) IFY67_01430 PF01713 Smr domain IFY67_01431 PF05175 Methyltransferase small domain IFY67_01432 PF01264 Chorismate synthase IFY67_01433 PF03411 Penicillin-insensitive murein endopeptidase IFY67_01434 PF01925 Sulfite exporter TauE/SafE IFY67_01435 PF04315 Elongation factor P hydroxylase IFY67_01436 PF08891 YfcL protein IFY67_01437 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IFY67_01437 PF01266 FAD dependent oxidoreductase IFY67_01438 PF02801 Beta-ketoacyl synthase, C-terminal domain IFY67_01438 PF00109 Beta-ketoacyl synthase, N-terminal domain IFY67_01439 PF07690 Major Facilitator Superfamily IFY67_01441 PF11890 Domain of unknown function (DUF3410) IFY67_01441 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IFY67_01441 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFY67_01442 PF02774 Semialdehyde dehydrogenase, dimerisation domain IFY67_01442 PF01118 Semialdehyde dehydrogenase, NAD binding domain IFY67_01443 PF01416 tRNA pseudouridine synthase IFY67_01444 PF09335 SNARE associated Golgi protein IFY67_01445 PF17848 Acetyl-coA carboxylase zinc finger domain IFY67_01445 PF01039 Carboxyl transferase domain IFY67_01446 PF02875 Mur ligase family, glutamate ligase domain IFY67_01446 PF08245 Mur ligase middle domain IFY67_01447 PF05036 Sporulation related domain IFY67_01448 PF02674 Colicin V production protein IFY67_01449 PF00156 Phosphoribosyl transferase domain IFY67_01450 PF02441 Flavoprotein IFY67_01451 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_01452 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_01453 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01454 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01455 PF00005 ABC transporter IFY67_01456 PF13302 Acetyltransferase (GNAT) domain IFY67_01457 PF08338 Domain of unknown function (DUF1731) IFY67_01457 PF01370 NAD dependent epimerase/dehydratase family IFY67_01458 PF02152 Dihydroneopterin aldolase IFY67_01459 PF00043 Glutathione S-transferase, C-terminal domain IFY67_01459 PF02798 Glutathione S-transferase, N-terminal domain IFY67_01460 PF02798 Glutathione S-transferase, N-terminal domain IFY67_01460 PF14834 Glutathione S-transferase, C-terminal domain IFY67_01461 PF12850 Calcineurin-like phosphoesterase superfamily domain IFY67_01462 PF00293 NUDIX domain IFY67_01463 PF07085 DRTGG domain IFY67_01463 PF01515 Phosphate acetyl/butaryl transferase IFY67_01464 PF00871 Acetokinase family IFY67_01465 PF04217 Protein of unknown function, DUF412 IFY67_01466 PF03887 YfbU domain IFY67_01467 PF13419 Haloacid dehalogenase-like hydrolase IFY67_01468 PF03600 Citrate transporter IFY67_01468 PF02080 TrkA-C domain IFY67_01470 PF00155 Aminotransferase class I and II IFY67_01471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01471 PF03466 LysR substrate binding domain IFY67_01472 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IFY67_01473 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IFY67_01474 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IFY67_01474 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IFY67_01476 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IFY67_01476 PF10531 SLBB domain IFY67_01476 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IFY67_01477 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_01477 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IFY67_01477 PF01568 Molydopterin dinucleotide binding domain IFY67_01477 PF00384 Molybdopterin oxidoreductase IFY67_01478 PF00146 NADH dehydrogenase IFY67_01479 PF12838 4Fe-4S dicluster domain IFY67_01480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IFY67_01481 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IFY67_01482 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IFY67_01482 PF00361 Proton-conducting membrane transporter IFY67_01483 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IFY67_01483 PF00361 Proton-conducting membrane transporter IFY67_01484 PF00361 Proton-conducting membrane transporter IFY67_01485 PF00361 Proton-conducting membrane transporter IFY67_01486 PF12706 Beta-lactamase superfamily domain IFY67_01487 PF12706 Beta-lactamase superfamily domain IFY67_01488 PF13673 Acetyltransferase (GNAT) domain IFY67_01489 PF00425 chorismate binding enzyme IFY67_01490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_01490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_01490 PF16582 Middle domain of thiamine pyrophosphate IFY67_01491 PF12697 Alpha/beta hydrolase family IFY67_01492 PF00378 Enoyl-CoA hydratase/isomerase IFY67_01493 PF13378 Enolase C-terminal domain-like IFY67_01494 PF00501 AMP-binding enzyme IFY67_01494 PF13193 AMP-binding enzyme C-terminal domain IFY67_01495 PF00293 NUDIX domain IFY67_01496 PF04754 Putative transposase, YhgA-like IFY67_01497 PF07437 YfaZ precursor IFY67_01498 PF00994 Probable molybdopterin binding domain IFY67_01499 PF09339 IclR helix-turn-helix domain IFY67_01499 PF01614 Bacterial transcriptional regulator IFY67_01500 PF13378 Enolase C-terminal domain-like IFY67_01500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IFY67_01501 PF07690 Major Facilitator Superfamily IFY67_01502 PF03328 HpcH/HpaI aldolase/citrate lyase family IFY67_01503 PF03328 HpcH/HpaI aldolase/citrate lyase family IFY67_01504 PF02754 Cysteine-rich domain IFY67_01504 PF13183 4Fe-4S dicluster domain IFY67_01505 PF02754 Cysteine-rich domain IFY67_01505 PF13183 4Fe-4S dicluster domain IFY67_01506 PF00890 FAD binding domain IFY67_01507 PF04324 BFD-like [2Fe-2S] binding domain IFY67_01507 PF01266 FAD dependent oxidoreductase IFY67_01508 PF07690 Major Facilitator Superfamily IFY67_01509 PF03009 Glycerophosphoryl diester phosphodiesterase family IFY67_01510 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_01511 PF00268 Ribonucleotide reductase, small chain IFY67_01512 PF02867 Ribonucleotide reductase, barrel domain IFY67_01512 PF03477 ATP cone domain IFY67_01512 PF00317 Ribonucleotide reductase, all-alpha domain IFY67_01514 PF00521 DNA gyrase/topoisomerase IV, subunit A IFY67_01514 PF03989 DNA gyrase C-terminal domain, beta-propeller IFY67_01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_01515 PF00512 His Kinase A (phospho-acceptor) domain IFY67_01515 PF09456 RcsC Alpha-Beta-Loop (ABL) IFY67_01515 PF00072 Response regulator receiver domain IFY67_01516 PF00196 Bacterial regulatory proteins, luxR family IFY67_01516 PF00072 Response regulator receiver domain IFY67_01517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_01517 PF01627 Hpt domain IFY67_01517 PF16359 RcsD-ABL domain IFY67_01518 PF00267 Gram-negative porin IFY67_01519 PF02424 ApbE family IFY67_01520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IFY67_01520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IFY67_01520 PF12833 Helix-turn-helix domain IFY67_01520 PF02805 Metal binding domain of Ada IFY67_01521 PF13532 2OG-Fe(II) oxygenase superfamily IFY67_01522 PF00005 ABC transporter IFY67_01523 PF03448 MgtE intracellular N domain IFY67_01523 PF01769 Divalent cation transporter IFY67_01523 PF00571 CBS domain IFY67_01524 PF00916 Sulfate permease family IFY67_01524 PF01740 STAS domain IFY67_01525 PF06039 Malate:quinone oxidoreductase (Mqo) IFY67_01526 PF03974 Ecotin IFY67_01527 PF01594 AI-2E family transporter IFY67_01529 PF11893 Domain of unknown function (DUF3413) IFY67_01529 PF00884 Sulfatase IFY67_01530 PF07208 Protein of unknown function (DUF1414) IFY67_01531 PF04245 37-kD nucleoid-associated bacterial protein IFY67_01532 PF08220 DeoR-like helix-turn-helix domain IFY67_01532 PF00455 DeoR C terminal sensor domain IFY67_01533 PF00293 NUDIX domain IFY67_01534 PF00144 Beta-lactamase IFY67_01536 PF01386 Ribosomal L25p family IFY67_01537 PF04851 Type III restriction enzyme, res subunit IFY67_01537 PF00271 Helicase conserved C-terminal domain IFY67_01538 PF00849 RNA pseudouridylate synthase IFY67_01538 PF01479 S4 domain IFY67_01539 PF07690 Major Facilitator Superfamily IFY67_01540 PF13989 YejG-like protein IFY67_01541 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_01541 PF00005 ABC transporter IFY67_01542 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01542 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_01543 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01544 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_01545 PF00563 EAL domain IFY67_01545 PF12792 CSS motif domain associated with EAL IFY67_01546 PF00877 NlpC/P60 family IFY67_01547 PF01569 PAP2 superfamily IFY67_01548 PF07683 Cobalamin synthesis protein cobW C-terminal domain IFY67_01548 PF02492 CobW/HypB/UreG, nucleotide-binding domain IFY67_01549 PF01232 Mannitol dehydrogenase Rossmann domain IFY67_01549 PF08125 Mannitol dehydrogenase C-terminal domain IFY67_01550 PF03786 D-mannonate dehydratase (UxuA) IFY67_01551 PF09285 Elongation factor P, C-terminal IFY67_01551 PF08207 Elongation factor P (EF-P) KOW-like domain IFY67_01551 PF01132 Elongation factor P (EF-P) OB domain IFY67_01552 PF03692 Putative zinc- or iron-chelating domain IFY67_01553 PF07690 Major Facilitator Superfamily IFY67_01554 PF00381 PTS HPr component phosphorylation site IFY67_01554 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_01555 PF00294 pfkB family carbohydrate kinase IFY67_01556 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_01556 PF02378 Phosphotransferase system, EIIC IFY67_01557 PF02378 Phosphotransferase system, EIIC IFY67_01557 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_01558 PF01261 Xylose isomerase-like TIM barrel IFY67_01559 PF03601 Conserved hypothetical protein 698 IFY67_01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01560 PF03466 LysR substrate binding domain IFY67_01561 PF00324 Amino acid permease IFY67_01562 PF07715 TonB-dependent Receptor Plug Domain IFY67_01562 PF00593 TonB dependent receptor IFY67_01563 PF00756 Putative esterase IFY67_01564 PF01227 GTP cyclohydrolase I IFY67_01565 PF04235 Protein of unknown function (DUF418) IFY67_01566 PF00356 Bacterial regulatory proteins, lacI family IFY67_01567 PF13407 Periplasmic binding protein domain IFY67_01568 PF00005 ABC transporter IFY67_01569 PF02653 Branched-chain amino acid transport system / permease component IFY67_01570 PF02698 DUF218 domain IFY67_01571 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IFY67_01571 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IFY67_01572 PF04172 LrgB-like family IFY67_01573 PF03788 LrgA family IFY67_01574 PF01207 Dihydrouridine synthase (Dus) IFY67_01575 PF04966 Carbohydrate-selective porin, OprB family IFY67_01576 PF03123 CAT RNA binding domain IFY67_01576 PF00874 PRD domain IFY67_01577 PF00367 phosphotransferase system, EIIB IFY67_01577 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IFY67_01577 PF02378 Phosphotransferase system, EIIC IFY67_01578 PF00232 Glycosyl hydrolase family 1 IFY67_01579 PF02321 Outer membrane efflux protein IFY67_01580 PF09335 SNARE associated Golgi protein IFY67_01581 PF04893 Yip1 domain IFY67_01582 PF00768 D-alanyl-D-alanine carboxypeptidase IFY67_01584 PF09330 D-lactate dehydrogenase, membrane binding IFY67_01584 PF01565 FAD binding domain IFY67_01585 PF14310 Fibronectin type III-like domain IFY67_01585 PF01915 Glycosyl hydrolase family 3 C-terminal domain IFY67_01585 PF00933 Glycosyl hydrolase family 3 N terminal domain IFY67_01586 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IFY67_01587 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01588 PF00005 ABC transporter IFY67_01589 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01591 PF07694 5TMR of 5TMR-LYT IFY67_01591 PF06580 Histidine kinase IFY67_01592 PF04397 LytTr DNA-binding domain IFY67_01592 PF00072 Response regulator receiver domain IFY67_01593 PF07308 Protein of unknown function (DUF1456) IFY67_01594 PF01588 Putative tRNA binding domain IFY67_01594 PF09334 tRNA synthetases class I (M) IFY67_01595 PF10609 NUBPL iron-transfer P-loop NTPase IFY67_01597 PF11776 Nickel/cobalt transporter regulator IFY67_01598 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01598 PF03466 LysR substrate binding domain IFY67_01599 PF00860 Permease family IFY67_01600 PF00860 Permease family IFY67_01601 PF01979 Amidohydrolase family IFY67_01601 PF13382 Adenine deaminase C-terminal domain IFY67_01602 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01602 PF03466 LysR substrate binding domain IFY67_01604 PF02110 Hydroxyethylthiazole kinase family IFY67_01605 PF08543 Phosphomethylpyrimidine kinase IFY67_01606 PF01791 DeoC/LacD family aldolase IFY67_01607 PF07690 Major Facilitator Superfamily IFY67_01609 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_01609 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_01610 PF00106 short chain dehydrogenase IFY67_01611 PF00356 Bacterial regulatory proteins, lacI family IFY67_01612 PF04198 Putative sugar-binding domain IFY67_01613 PF01232 Mannitol dehydrogenase Rossmann domain IFY67_01613 PF08125 Mannitol dehydrogenase C-terminal domain IFY67_01614 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_01614 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_01615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_01615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_01616 PF07690 Major Facilitator Superfamily IFY67_01617 PF13419 Haloacid dehalogenase-like hydrolase IFY67_01618 PF13378 Enolase C-terminal domain-like IFY67_01618 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IFY67_01619 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_01620 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01621 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01621 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_01622 PF00005 ABC transporter IFY67_01622 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_01623 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_01623 PF00005 ABC transporter IFY67_01624 PF00781 Diacylglycerol kinase catalytic domain IFY67_01625 PF16325 Peptidase family U32 C-terminal domain IFY67_01625 PF01136 Peptidase family U32 IFY67_01626 PF00486 Transcriptional regulatory protein, C terminal IFY67_01626 PF00072 Response regulator receiver domain IFY67_01627 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_01627 PF00672 HAMP domain IFY67_01627 PF00512 His Kinase A (phospho-acceptor) domain IFY67_01628 PF07690 Major Facilitator Superfamily IFY67_01629 PF00873 AcrB/AcrD/AcrF family IFY67_01630 PF00873 AcrB/AcrD/AcrF family IFY67_01631 PF13533 Biotin-lipoyl like IFY67_01632 PF00375 Sodium:dicarboxylate symporter family IFY67_01635 PF00486 Transcriptional regulatory protein, C terminal IFY67_01635 PF00072 Response regulator receiver domain IFY67_01636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_01636 PF00672 HAMP domain IFY67_01636 PF13426 PAS domain IFY67_01636 PF00512 His Kinase A (phospho-acceptor) domain IFY67_01637 PF00012 Hsp70 protein IFY67_01638 PF06029 AlkA N-terminal domain IFY67_01638 PF00730 HhH-GPD superfamily base excision DNA repair protein IFY67_01639 PF00485 Phosphoribulokinase / Uridine kinase family IFY67_01640 PF00692 dUTPase IFY67_01641 PF05170 AsmA family IFY67_01642 PF03741 Integral membrane protein TerC family IFY67_01642 PF03471 Transporter associated domain IFY67_01642 PF00571 CBS domain IFY67_01643 PF00483 Nucleotidyl transferase IFY67_01644 PF01569 PAP2 superfamily IFY67_01645 PF14052 Capsule assembly protein Wzi IFY67_01646 PF02563 Polysaccharide biosynthesis/export protein IFY67_01646 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IFY67_01646 PF10531 SLBB domain IFY67_01647 PF02706 Chain length determinant protein IFY67_01647 PF13807 G-rich domain on putative tyrosine kinase IFY67_01647 PF13614 AAA domain IFY67_01648 PF13439 Glycosyltransferase Family 4 IFY67_01652 PF13439 Glycosyltransferase Family 4 IFY67_01652 PF00534 Glycosyl transferases group 1 IFY67_01653 PF02397 Bacterial sugar transferase IFY67_01658 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IFY67_01658 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IFY67_01659 PF00483 Nucleotidyl transferase IFY67_01659 PF01050 Mannose-6-phosphate isomerase IFY67_01660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IFY67_01660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IFY67_01660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IFY67_01660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IFY67_01661 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IFY67_01661 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IFY67_01661 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IFY67_01662 PF01370 NAD dependent epimerase/dehydratase family IFY67_01663 PF00483 Nucleotidyl transferase IFY67_01663 PF01050 Mannose-6-phosphate isomerase IFY67_01664 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IFY67_01664 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IFY67_01664 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IFY67_01664 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IFY67_01666 PF00005 ABC transporter IFY67_01667 PF13847 Methyltransferase domain IFY67_01667 PF00069 Protein kinase domain IFY67_01668 PF00534 Glycosyl transferases group 1 IFY67_01668 PF13439 Glycosyltransferase Family 4 IFY67_01669 PF00534 Glycosyl transferases group 1 IFY67_01669 PF00862 Sucrose synthase IFY67_01671 PF01502 Phosphoribosyl-AMP cyclohydrolase IFY67_01671 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IFY67_01672 PF00977 Histidine biosynthesis protein IFY67_01673 PF00977 Histidine biosynthesis protein IFY67_01674 PF00117 Glutamine amidotransferase class-I IFY67_01675 PF08645 Polynucleotide kinase 3 phosphatase IFY67_01675 PF00475 Imidazoleglycerol-phosphate dehydratase IFY67_01676 PF00155 Aminotransferase class I and II IFY67_01677 PF00815 Histidinol dehydrogenase IFY67_01678 PF08029 HisG, C-terminal domain IFY67_01678 PF01634 ATP phosphoribosyltransferase IFY67_01679 PF01370 NAD dependent epimerase/dehydratase family IFY67_01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01680 PF03466 LysR substrate binding domain IFY67_01681 PF13520 Amino acid permease IFY67_01682 PF01022 Bacterial regulatory protein, arsR family IFY67_01683 PF00009 Elongation factor Tu GTP binding domain IFY67_01683 PF03144 Elongation factor Tu domain 2 IFY67_01683 PF14492 Elongation Factor G, domain II IFY67_01683 PF00679 Elongation factor G C-terminus IFY67_01683 PF03764 Elongation factor G, domain IV IFY67_01684 PF08411 Exonuclease C-terminal IFY67_01684 PF00929 Exonuclease IFY67_01685 PF00768 D-alanyl-D-alanine carboxypeptidase IFY67_01685 PF07943 Penicillin-binding protein 5, C-terminal domain IFY67_01686 PF06445 GyrI-like small molecule binding domain IFY67_01687 PF04632 Fusaric acid resistance protein family IFY67_01688 PF04363 Protein of unknown function (DUF496) IFY67_01689 PF02654 Cobalamin-5-phosphate synthase IFY67_01690 PF02277 Phosphoribosyltransferase IFY67_01691 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IFY67_01691 PF05221 S-adenosyl-L-homocysteine hydrolase IFY67_01693 PF14552 Tautomerase enzyme IFY67_01694 PF03466 LysR substrate binding domain IFY67_01694 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01696 PF07690 Major Facilitator Superfamily IFY67_01696 PF00083 Sugar (and other) transporter IFY67_01698 PF13188 PAS domain IFY67_01698 PF00990 Diguanylate cyclase, GGDEF domain IFY67_01698 PF00563 EAL domain IFY67_01698 PF03707 Bacterial signalling protein N terminal repeat IFY67_01699 PF09313 Domain of unknown function (DUF1971) IFY67_01700 PF08956 Domain of unknown function (DUF1869) IFY67_01701 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01701 PF03466 LysR substrate binding domain IFY67_01704 PF00561 alpha/beta hydrolase fold IFY67_01705 PF05230 MASE2 domain IFY67_01705 PF00990 Diguanylate cyclase, GGDEF domain IFY67_01707 PF13276 HTH-like domain IFY67_01707 PF13683 Integrase core domain IFY67_01708 PF01527 Transposase IFY67_01709 PF02311 AraC-like ligand binding domain IFY67_01709 PF12833 Helix-turn-helix domain IFY67_01712 PF13533 Biotin-lipoyl like IFY67_01713 PF13276 HTH-like domain IFY67_01713 PF00665 Integrase core domain IFY67_01714 PF01527 Transposase IFY67_01718 PF07690 Major Facilitator Superfamily IFY67_01719 PF00196 Bacterial regulatory proteins, luxR family IFY67_01721 PF02558 Ketopantoate reductase PanE/ApbA IFY67_01721 PF08546 Ketopantoate reductase PanE/ApbA C terminal IFY67_01723 PF00589 Phage integrase family IFY67_01723 PF13356 Arm DNA-binding domain IFY67_01725 PF01554 MatE IFY67_01727 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus IFY67_01727 PF01048 Phosphorylase superfamily IFY67_01729 PF12146 Serine aminopeptidase, S33 IFY67_01731 PF00107 Zinc-binding dehydrogenase IFY67_01731 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_01732 PF00440 Bacterial regulatory proteins, tetR family IFY67_01732 PF16925 Tetracyclin repressor-like, C-terminal domain IFY67_01733 PF00999 Sodium/hydrogen exchanger family IFY67_01734 PF02384 N-6 DNA Methylase IFY67_01734 PF12161 HsdM N-terminal domain IFY67_01738 PF01527 Transposase IFY67_01739 PF08401 Domain of unknown function (DUF1738) IFY67_01739 PF13362 Toprim domain IFY67_01739 PF18818 Metallopeptidase superfamily domain IFY67_01745 PF00437 Type II/IV secretion system protein IFY67_01746 PF03743 Bacterial conjugation TrbI-like protein IFY67_01747 PF03524 Conjugal transfer protein IFY67_01753 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IFY67_01754 PF04956 TrbC/VIRB2 family IFY67_01761 PF00593 TonB dependent receptor IFY67_01761 PF07715 TonB-dependent Receptor Plug Domain IFY67_01762 PF00501 AMP-binding enzyme IFY67_01762 PF13193 AMP-binding enzyme C-terminal domain IFY67_01763 PF00975 Thioesterase domain IFY67_01766 PF00668 Condensation domain IFY67_01766 PF00550 Phosphopantetheine attachment site IFY67_01766 PF08242 Methyltransferase domain IFY67_01766 PF00501 AMP-binding enzyme IFY67_01767 PF16197 Ketoacyl-synthetase C-terminal extension IFY67_01767 PF00698 Acyl transferase domain IFY67_01767 PF00668 Condensation domain IFY67_01767 PF00550 Phosphopantetheine attachment site IFY67_01767 PF02801 Beta-ketoacyl synthase, C-terminal domain IFY67_01767 PF00109 Beta-ketoacyl synthase, N-terminal domain IFY67_01768 PF00668 Condensation domain IFY67_01768 PF00550 Phosphopantetheine attachment site IFY67_01768 PF08242 Methyltransferase domain IFY67_01768 PF00501 AMP-binding enzyme IFY67_01769 PF08242 Methyltransferase domain IFY67_01769 PF00501 AMP-binding enzyme IFY67_01769 PF00550 Phosphopantetheine attachment site IFY67_01769 PF00668 Condensation domain IFY67_01771 PF00005 ABC transporter IFY67_01771 PF00664 ABC transporter transmembrane region IFY67_01771 PF08021 Siderophore-interacting FAD-binding domain IFY67_01771 PF04954 Siderophore-interacting protein IFY67_01772 PF00664 ABC transporter transmembrane region IFY67_01772 PF00005 ABC transporter IFY67_01773 PF07690 Major Facilitator Superfamily IFY67_01774 PF00425 chorismate binding enzyme IFY67_01775 PF00589 Phage integrase family IFY67_01775 PF13356 Arm DNA-binding domain IFY67_01777 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01777 PF03466 LysR substrate binding domain IFY67_01778 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01778 PF03466 LysR substrate binding domain IFY67_01779 PF03734 L,D-transpeptidase catalytic domain IFY67_01779 PF17969 L,D-transpeptidase C-terminal domain IFY67_01781 PF03466 LysR substrate binding domain IFY67_01781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01783 PF06167 Glucose-regulated metallo-peptidase M90 IFY67_01785 PF00267 Gram-negative porin IFY67_01787 PF01966 HD domain IFY67_01788 PF18284 DNA methylase N-terminal domain IFY67_01788 PF00145 C-5 cytosine-specific DNA methylase IFY67_01789 PF03852 DNA mismatch endonuclease Vsr IFY67_01790 PF00892 EamA-like transporter family IFY67_01791 PF05661 Protein of unknown function (DUF808) IFY67_01792 PF05661 Protein of unknown function (DUF808) IFY67_01793 PF00990 Diguanylate cyclase, GGDEF domain IFY67_01793 PF17151 Periplasmic sensor domain IFY67_01794 PF17151 Periplasmic sensor domain IFY67_01794 PF00990 Diguanylate cyclase, GGDEF domain IFY67_01795 PF10733 Protein of unknown function (DUF2525) IFY67_01796 PF10781 Dextransucrase DSRB IFY67_01797 PF00196 Bacterial regulatory proteins, luxR family IFY67_01798 PF13987 YedD-like protein IFY67_01799 PF00128 Alpha amylase, catalytic domain IFY67_01799 PF02806 Alpha amylase, C-terminal all-beta domain IFY67_01800 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_01801 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_01802 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_01803 PF00005 ABC transporter IFY67_01804 PF03472 Autoinducer binding domain IFY67_01804 PF00196 Bacterial regulatory proteins, luxR family IFY67_01805 PF10769 Protein of unknown function (DUF2594) IFY67_01806 PF00196 Bacterial regulatory proteins, luxR family IFY67_01806 PF00072 Response regulator receiver domain IFY67_01807 PF02151 UvrB/uvrC motif IFY67_01807 PF08459 UvrC Helix-hairpin-helix N-terminal IFY67_01807 PF01541 GIY-YIG catalytic domain IFY67_01808 PF01066 CDP-alcohol phosphatidyltransferase IFY67_01823 PF00772 DnaB-like helicase N terminal domain IFY67_01823 PF03796 DnaB-like helicase C terminal domain IFY67_01853 PF04971 Bacteriophage P21 holin S IFY67_01854 PF00959 Phage lysozyme IFY67_01858 PF02810 SEC-C motif IFY67_01858 PF03695 Uncharacterised protein family (UPF0149) IFY67_01859 PF03222 Tryptophan/tyrosine permease family IFY67_01860 PF10678 Protein of unknown function (DUF2492) IFY67_01861 PF00210 Ferritin-like domain IFY67_01863 PF07690 Major Facilitator Superfamily IFY67_01864 PF10964 Protein of unknown function (DUF2766) IFY67_01866 PF00210 Ferritin-like domain IFY67_01867 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IFY67_01868 PF00005 ABC transporter IFY67_01869 PF02653 Branched-chain amino acid transport system / permease component IFY67_01870 PF02358 Trehalose-phosphatase IFY67_01871 PF00982 Glycosyltransferase family 20 IFY67_01872 PF00582 Universal stress protein family IFY67_01875 PF07470 Glycosyl Hydrolase Family 88 IFY67_01876 PF03485 Arginyl tRNA synthetase N terminal domain IFY67_01876 PF05746 DALR anticodon binding domain IFY67_01876 PF00750 tRNA synthetases class I (R) IFY67_01877 PF06185 YecM protein IFY67_01878 PF03932 CutC family IFY67_01879 PF08003 Protein of unknown function (DUF1698) IFY67_01880 PF13649 Methyltransferase domain IFY67_01881 PF01124 MAPEG family IFY67_01882 PF01904 Protein of unknown function DUF72 IFY67_01883 PF00857 Isochorismatase family IFY67_01884 PF01336 OB-fold nucleic acid binding domain IFY67_01884 PF00152 tRNA synthetases class II (D, K and N) IFY67_01884 PF02938 GAD domain IFY67_01885 PF00293 NUDIX domain IFY67_01886 PF01709 Transcriptional regulator IFY67_01887 PF02075 Crossover junction endodeoxyribonuclease RuvC IFY67_01888 PF01330 RuvA N terminal domain IFY67_01888 PF07499 RuvA, C-terminal domain IFY67_01889 PF05491 RuvB C-terminal winged helix domain IFY67_01889 PF17864 RuvB AAA lid domain IFY67_01889 PF05496 Holliday junction DNA helicase RuvB P-loop domain IFY67_01890 PF00950 ABC 3 transport family IFY67_01891 PF00005 ABC transporter IFY67_01892 PF01297 Zinc-uptake complex component A periplasmic IFY67_01893 PF01551 Peptidase family M23 IFY67_01893 PF08525 Opacity-associated protein A N-terminal motif IFY67_01893 PF01476 LysM domain IFY67_01894 PF03279 Bacterial lipid A biosynthesis acyltransferase IFY67_01895 PF02887 Pyruvate kinase, alpha/beta domain IFY67_01895 PF00224 Pyruvate kinase, barrel domain IFY67_01896 PF01418 Helix-turn-helix domain, rpiR family IFY67_01896 PF01380 SIS domain IFY67_01897 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IFY67_01897 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IFY67_01898 PF00920 Dehydratase family IFY67_01899 PF01081 KDPG and KHG aldolase IFY67_01900 PF02222 ATP-grasp domain IFY67_01901 PF07130 YebG protein IFY67_01902 PF04391 Protein of unknown function (DUF533) IFY67_01903 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IFY67_01903 PF00326 Prolyl oligopeptidase family IFY67_01904 PF00929 Exonuclease IFY67_01905 PF06440 DNA polymerase III, theta subunit IFY67_01906 PF04234 CopC domain IFY67_01907 PF05425 Copper resistance protein D IFY67_01908 PF10709 Protein of unknown function (DUF2511) IFY67_01910 PF04393 Protein of unknown function (DUF535) IFY67_01911 PF00149 Calcineurin-like phosphoesterase IFY67_01912 PF07358 Protein of unknown function (DUF1482) IFY67_01913 PF07351 Protein of unknown function (DUF1480) IFY67_01914 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IFY67_01914 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF IFY67_01914 PF01189 16S rRNA methyltransferase RsmB/F IFY67_01915 PF02470 MlaD protein IFY67_01916 PF04403 Paraquat-inducible protein A IFY67_01917 PF13185 GAF domain IFY67_01918 PF17516 ProQ C-terminal domain IFY67_01918 PF04352 ProQ/FINO family IFY67_01919 PF11818 C-terminal domain of tail specific protease (DUF3340) IFY67_01919 PF17804 Tail specific protease N-terminal domain IFY67_01919 PF03572 Peptidase family S41 IFY67_01919 PF00595 PDZ domain IFY67_01920 PF01435 Peptidase family M48 IFY67_01921 PF07690 Major Facilitator Superfamily IFY67_01922 PF09339 IclR helix-turn-helix domain IFY67_01922 PF01614 Bacterial transcriptional regulator IFY67_01923 PF13996 YobH-like protein IFY67_01924 PF13737 Transposase DDE domain IFY67_01925 PF13974 YebO-like protein IFY67_01926 PF00313 'Cold-shock' DNA-binding domain IFY67_01927 PF00905 Penicillin binding protein transpeptidase domain IFY67_01927 PF03717 Penicillin-binding Protein dimerisation domain IFY67_01928 PF13847 Methyltransferase domain IFY67_01929 PF02659 Putative manganese efflux pump IFY67_01930 PF06173 Protein of unknown function (DUF986) IFY67_01931 PF06173 Protein of unknown function (DUF986) IFY67_01932 PF03613 PTS system mannose/fructose/sorbose family IID component IFY67_01933 PF03609 PTS system sorbose-specific iic component IFY67_01934 PF03830 PTS system sorbose subfamily IIB component IFY67_01934 PF03610 PTS system fructose IIA component IFY67_01935 PF03741 Integral membrane protein TerC family IFY67_01935 PF03471 Transporter associated domain IFY67_01936 PF00563 EAL domain IFY67_01936 PF12792 CSS motif domain associated with EAL IFY67_01937 PF03315 Serine dehydratase beta chain IFY67_01937 PF03313 Serine dehydratase alpha chain IFY67_01938 PF00293 NUDIX domain IFY67_01939 PF00425 chorismate binding enzyme IFY67_01939 PF04715 Anthranilate synthase component I, N terminal region IFY67_01940 PF03701 Uncharacterised protein family (UPF0181) IFY67_01941 PF01042 Endoribonuclease L-PSP IFY67_01942 PF13307 Helicase C-terminal domain IFY67_01942 PF04851 Type III restriction enzyme, res subunit IFY67_01943 PF00814 Glycoprotease family IFY67_01944 PF03843 Outer membrane lipoprotein Slp family IFY67_01945 PF00501 AMP-binding enzyme IFY67_01945 PF13193 AMP-binding enzyme C-terminal domain IFY67_01946 PF00570 HRDC domain IFY67_01946 PF01612 3'-5' exonuclease IFY67_01947 PF03776 Septum formation topological specificity factor MinE IFY67_01948 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IFY67_01949 PF03775 Septum formation inhibitor MinC, C-terminal domain IFY67_01949 PF05209 Septum formation inhibitor MinC, N-terminal domain IFY67_01950 PF05166 YcgL domain IFY67_01951 PF01557 Fumarylacetoacetate (FAA) hydrolase family IFY67_01952 PF03692 Putative zinc- or iron-chelating domain IFY67_01954 PF02600 Disulfide bond formation protein DsbB IFY67_01955 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IFY67_01956 PF00392 Bacterial regulatory proteins, gntR family IFY67_01956 PF07840 FadR C-terminal domain IFY67_01957 PF04293 SpoVR like protein IFY67_01958 PF01266 FAD dependent oxidoreductase IFY67_01959 PF00842 Alanine racemase, C-terminal domain IFY67_01959 PF01168 Alanine racemase, N-terminal domain IFY67_01960 PF02080 TrkA-C domain IFY67_01960 PF03471 Transporter associated domain IFY67_01960 PF00999 Sodium/hydrogen exchanger family IFY67_01961 PF02016 LD-carboxypeptidase N-terminal domain IFY67_01961 PF17676 LD-carboxypeptidase C-terminal domain IFY67_01962 PF02016 LD-carboxypeptidase N-terminal domain IFY67_01962 PF17676 LD-carboxypeptidase C-terminal domain IFY67_01963 PF01464 Transglycosylase SLT domain IFY67_01964 PF07715 TonB-dependent Receptor Plug Domain IFY67_01964 PF00593 TonB dependent receptor IFY67_01965 PF01204 Trehalase IFY67_01966 PF01204 Trehalase IFY67_01968 PF14403 Circularly permuted ATP-grasp type 2 IFY67_01974 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01974 PF03466 LysR substrate binding domain IFY67_01975 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_01976 PF03222 Tryptophan/tyrosine permease family IFY67_01977 PF00871 Acetokinase family IFY67_01978 PF02901 Pyruvate formate lyase-like IFY67_01978 PF01228 Glycine radical IFY67_01979 PF13458 Periplasmic binding protein IFY67_01980 PF02653 Branched-chain amino acid transport system / permease component IFY67_01981 PF02653 Branched-chain amino acid transport system / permease component IFY67_01981 PF11862 Domain of unknown function (DUF3382) IFY67_01982 PF00005 ABC transporter IFY67_01982 PF12399 Branched-chain amino acid ATP-binding cassette transporter IFY67_01983 PF00005 ABC transporter IFY67_01984 PF03466 LysR substrate binding domain IFY67_01984 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01985 PF01293 Phosphoenolpyruvate carboxykinase IFY67_01987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01987 PF03466 LysR substrate binding domain IFY67_01988 PF07690 Major Facilitator Superfamily IFY67_01990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_01990 PF03466 LysR substrate binding domain IFY67_01991 PF12167 Arm DNA-binding domain IFY67_01991 PF00589 Phage integrase family IFY67_02003 PF06254 Putative bacterial toxin ydaT IFY67_02013 PF13737 Transposase DDE domain IFY67_02016 PF05869 DNA N-6-adenine-methyltransferase (Dam) IFY67_02020 PF00959 Phage lysozyme IFY67_02021 PF03245 Bacteriophage Rz lysis protein IFY67_02025 PF04466 Phage terminase large subunit IFY67_02025 PF17288 Terminase RNAseH like domain IFY67_02026 PF06381 Protein of unknown function (DUF1073) IFY67_02053 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IFY67_02055 PF00717 Peptidase S24-like IFY67_02056 PF03466 LysR substrate binding domain IFY67_02056 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02058 PF00849 RNA pseudouridylate synthase IFY67_02059 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IFY67_02064 PF13488 Glycine zipper IFY67_02064 PF00691 OmpA family IFY67_02066 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IFY67_02066 PF13296 Putative type VI secretion system Rhs element Vgr IFY67_02066 PF04717 Type VI secretion system, phage-baseplate injector IFY67_02083 PF13407 Periplasmic binding protein domain IFY67_02085 PF06071 Protein of unknown function (DUF933) IFY67_02085 PF01926 50S ribosome-binding GTPase IFY67_02086 PF01195 Peptidyl-tRNA hydrolase IFY67_02087 PF10762 Protein of unknown function (DUF2583) IFY67_02089 PF01740 STAS domain IFY67_02089 PF00916 Sulfate permease family IFY67_02090 PF14572 Phosphoribosyl synthetase-associated domain IFY67_02090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IFY67_02091 PF00288 GHMP kinases N terminal domain IFY67_02091 PF08544 GHMP kinases C terminal IFY67_02092 PF03550 Outer membrane lipoprotein LolB IFY67_02093 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IFY67_02093 PF01488 Shikimate / quinate 5-dehydrogenase IFY67_02093 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IFY67_02094 PF03462 PCRF domain IFY67_02094 PF00472 RF-1 domain IFY67_02095 PF17827 PrmC N-terminal domain IFY67_02095 PF13847 Methyltransferase domain IFY67_02096 PF04247 Invasion gene expression up-regulator, SirB IFY67_02097 PF13369 Transglutaminase-like superfamily IFY67_02098 PF00793 DAHP synthetase I family IFY67_02099 PF01699 Sodium/calcium exchanger protein IFY67_02100 PF06150 ChaB IFY67_02101 PF04752 ChaC-like protein IFY67_02103 PF02635 DsrE/DsrF-like family IFY67_02104 PF03861 ANTAR domain IFY67_02104 PF08376 Nitrate and nitrite sensing IFY67_02106 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02107 PF00005 ABC transporter IFY67_02108 PF04324 BFD-like [2Fe-2S] binding domain IFY67_02108 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IFY67_02108 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_02108 PF13806 Rieske-like [2Fe-2S] domain IFY67_02108 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IFY67_02108 PF18267 Rubredoxin NAD+ reductase C-terminal domain IFY67_02109 PF04324 BFD-like [2Fe-2S] binding domain IFY67_02109 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_02109 PF00384 Molybdopterin oxidoreductase IFY67_02109 PF01568 Molydopterin dinucleotide binding domain IFY67_02110 PF11924 Inverse autotransporter, beta-domain IFY67_02111 PF00072 Response regulator receiver domain IFY67_02111 PF00196 Bacterial regulatory proteins, luxR family IFY67_02112 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IFY67_02112 PF07730 Histidine kinase IFY67_02112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_02112 PF00672 HAMP domain IFY67_02113 PF07690 Major Facilitator Superfamily IFY67_02114 PF00384 Molybdopterin oxidoreductase IFY67_02114 PF01568 Molydopterin dinucleotide binding domain IFY67_02114 PF14710 Respiratory nitrate reductase alpha N-terminal IFY67_02115 PF14711 Respiratory nitrate reductase beta C-terminal IFY67_02115 PF13247 4Fe-4S dicluster domain IFY67_02116 PF02613 Nitrate reductase delta subunit IFY67_02117 PF02665 Nitrate reductase gamma subunit IFY67_02119 PF01037 Lrp/AsnC ligand binding domain IFY67_02122 PF00551 Formyl transferase IFY67_02122 PF01842 ACT domain IFY67_02123 PF02810 SEC-C motif IFY67_02124 PF01734 Patatin-like phospholipase IFY67_02125 PF00072 Response regulator receiver domain IFY67_02126 PF00483 Nucleotidyl transferase IFY67_02127 PF00816 H-NS histone family IFY67_02128 PF00265 Thymidine kinase IFY67_02129 PF00171 Aldehyde dehydrogenase family IFY67_02129 PF00465 Iron-containing alcohol dehydrogenase IFY67_02130 PF01914 MarC family integral membrane protein IFY67_02131 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_02132 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02133 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_02133 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02134 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_02134 PF00005 ABC transporter IFY67_02135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_02135 PF00005 ABC transporter IFY67_02136 PF00027 Cyclic nucleotide-binding domain IFY67_02136 PF00520 Ion transport protein IFY67_02137 PF04269 Protein of unknown function, DUF440 IFY67_02138 PF13091 PLD-like domain IFY67_02138 PF13396 Phospholipase_D-nuclease N-terminal IFY67_02140 PF04264 YceI-like domain IFY67_02141 PF03795 YCII-related domain IFY67_02142 PF03544 Gram-negative bacterial TonB protein C-terminal IFY67_02143 PF03881 Fructosamine kinase IFY67_02144 PF11080 Endoribonuclease GhoS IFY67_02145 PF00294 pfkB family carbohydrate kinase IFY67_02146 PF04338 Protein of unknown function, DUF481 IFY67_02148 PF03129 Anticodon binding domain IFY67_02148 PF02824 TGS domain IFY67_02148 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFY67_02148 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IFY67_02149 PF05198 Translation initiation factor IF-3, N-terminal domain IFY67_02149 PF00707 Translation initiation factor IF-3, C-terminal domain IFY67_02150 PF01632 Ribosomal protein L35 IFY67_02151 PF00453 Ribosomal protein L20 IFY67_02152 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IFY67_02152 PF01409 tRNA synthetases class II core domain (F) IFY67_02153 PF03147 Ferredoxin-fold anticodon binding domain IFY67_02153 PF03484 tRNA synthetase B5 domain IFY67_02153 PF03483 B3/4 domain IFY67_02153 PF01588 Putative tRNA binding domain IFY67_02153 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IFY67_02154 PF00216 Bacterial DNA-binding protein IFY67_02156 PF01266 FAD dependent oxidoreductase IFY67_02157 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02157 PF03466 LysR substrate binding domain IFY67_02159 PF01032 FecCD transport family IFY67_02160 PF03180 NLPA lipoprotein IFY67_02161 PF00255 Glutathione peroxidase IFY67_02162 PF00005 ABC transporter IFY67_02163 PF00877 NlpC/P60 family IFY67_02164 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IFY67_02165 PF10636 Hemin uptake protein hemP IFY67_02166 PF00793 DAHP synthetase I family IFY67_02167 PF03618 Kinase/pyrophosphorylase IFY67_02168 PF00391 PEP-utilising enzyme, mobile domain IFY67_02168 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IFY67_02168 PF02896 PEP-utilising enzyme, TIM barrel domain IFY67_02169 PF01594 AI-2E family transporter IFY67_02170 PF02913 FAD linked oxidases, C-terminal domain IFY67_02170 PF13183 4Fe-4S dicluster domain IFY67_02170 PF01565 FAD binding domain IFY67_02171 PF01565 FAD binding domain IFY67_02171 PF13183 4Fe-4S dicluster domain IFY67_02171 PF02913 FAD linked oxidases, C-terminal domain IFY67_02172 PF03061 Thioesterase superfamily IFY67_02173 PF04226 Transglycosylase associated protein IFY67_02177 PF08267 Cobalamin-independent synthase, N-terminal domain IFY67_02177 PF01717 Cobalamin-independent synthase, Catalytic domain IFY67_02178 PF07690 Major Facilitator Superfamily IFY67_02179 PF00005 ABC transporter IFY67_02180 PF01032 FecCD transport family IFY67_02182 PF03466 LysR substrate binding domain IFY67_02182 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02184 PF00440 Bacterial regulatory proteins, tetR family IFY67_02186 PF00873 AcrB/AcrD/AcrF family IFY67_02187 PF01070 FMN-dependent dehydrogenase IFY67_02188 PF00440 Bacterial regulatory proteins, tetR family IFY67_02191 PF01521 Iron-sulphur cluster biosynthesis IFY67_02192 PF01458 Uncharacterized protein family (UPF0051) IFY67_02193 PF00005 ABC transporter IFY67_02194 PF01458 Uncharacterized protein family (UPF0051) IFY67_02195 PF00266 Aminotransferase class-V IFY67_02196 PF02657 Fe-S metabolism associated domain IFY67_02197 PF03734 L,D-transpeptidase catalytic domain IFY67_02197 PF01476 LysM domain IFY67_02197 PF17969 L,D-transpeptidase C-terminal domain IFY67_02198 PF04728 Lipoprotein leucine-zipper IFY67_02199 PF02887 Pyruvate kinase, alpha/beta domain IFY67_02199 PF00224 Pyruvate kinase, barrel domain IFY67_02200 PF10965 Protein of unknown function (DUF2767) IFY67_02201 PF17926 Tetracyclin repressor-like, C-terminal domain IFY67_02201 PF00440 Bacterial regulatory proteins, tetR family IFY67_02202 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IFY67_02202 PF01261 Xylose isomerase-like TIM barrel IFY67_02203 PF07690 Major Facilitator Superfamily IFY67_02204 PF01488 Shikimate / quinate 5-dehydrogenase IFY67_02204 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IFY67_02204 PF08501 Shikimate dehydrogenase substrate binding domain IFY67_02206 PF00005 ABC transporter IFY67_02207 PF01032 FecCD transport family IFY67_02208 PF01497 Periplasmic binding protein IFY67_02209 PF01614 Bacterial transcriptional regulator IFY67_02209 PF09339 IclR helix-turn-helix domain IFY67_02210 PF01494 FAD binding domain IFY67_02211 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IFY67_02212 PF12697 Alpha/beta hydrolase family IFY67_02213 PF01557 Fumarylacetoacetate (FAA) hydrolase family IFY67_02214 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation IFY67_02214 PF01118 Semialdehyde dehydrogenase, NAD binding domain IFY67_02215 PF07836 DmpG-like communication domain IFY67_02215 PF00682 HMGL-like IFY67_02216 PF07690 Major Facilitator Superfamily IFY67_02217 PF02578 Multi-copper polyphenol oxidoreductase laccase IFY67_02219 PF05995 Cysteine dioxygenase type I IFY67_02220 PF03466 LysR substrate binding domain IFY67_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02221 PF00296 Luciferase-like monooxygenase IFY67_02225 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02226 PF00005 ABC transporter IFY67_02227 PF07715 TonB-dependent Receptor Plug Domain IFY67_02228 PF00005 ABC transporter IFY67_02229 PF01032 FecCD transport family IFY67_02230 PF01032 FecCD transport family IFY67_02231 PF01032 FecCD transport family IFY67_02232 PF01032 FecCD transport family IFY67_02234 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_02235 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02236 PF00005 ABC transporter IFY67_02239 PF07690 Major Facilitator Superfamily IFY67_02242 PF07687 Peptidase dimerisation domain IFY67_02242 PF01546 Peptidase family M20/M25/M40 IFY67_02243 PF01568 Molydopterin dinucleotide binding domain IFY67_02243 PF00384 Molybdopterin oxidoreductase IFY67_02243 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_02244 PF02615 Malate/L-lactate dehydrogenase IFY67_02245 PF02615 Malate/L-lactate dehydrogenase IFY67_02248 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02249 PF08402 TOBE domain IFY67_02249 PF00005 ABC transporter IFY67_02251 PF13618 Gluconate 2-dehydrogenase subunit 3 IFY67_02252 PF05199 GMC oxidoreductase IFY67_02252 PF00732 GMC oxidoreductase IFY67_02253 PF00034 Cytochrome c IFY67_02253 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IFY67_02254 PF00005 ABC transporter IFY67_02255 PF03379 CcmB protein IFY67_02256 PF01578 Cytochrome C assembly protein IFY67_02258 PF03100 CcmE IFY67_02259 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IFY67_02259 PF01578 Cytochrome C assembly protein IFY67_02260 PF01578 Cytochrome C assembly protein IFY67_02260 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IFY67_02261 PF08534 Redoxin IFY67_02262 PF03918 Cytochrome C biogenesis protein IFY67_02265 PF13276 HTH-like domain IFY67_02265 PF00665 Integrase core domain IFY67_02266 PF01527 Transposase IFY67_02269 PF03544 Gram-negative bacterial TonB protein C-terminal IFY67_02273 PF00672 HAMP domain IFY67_02273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_02273 PF00512 His Kinase A (phospho-acceptor) domain IFY67_02274 PF00072 Response regulator receiver domain IFY67_02274 PF00486 Transcriptional regulatory protein, C terminal IFY67_02277 PF00873 AcrB/AcrD/AcrF family IFY67_02278 PF00873 AcrB/AcrD/AcrF family IFY67_02281 PF00106 short chain dehydrogenase IFY67_02282 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_02282 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_02282 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_02283 PF03306 Alpha-acetolactate decarboxylase IFY67_02284 PF03466 LysR substrate binding domain IFY67_02284 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02285 PF03466 LysR substrate binding domain IFY67_02286 PF00106 short chain dehydrogenase IFY67_02288 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IFY67_02288 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IFY67_02289 PF00108 Thiolase, N-terminal domain IFY67_02289 PF02803 Thiolase, C-terminal domain IFY67_02290 PF01144 Coenzyme A transferase IFY67_02291 PF01144 Coenzyme A transferase IFY67_02292 PF03466 LysR substrate binding domain IFY67_02292 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02295 PF07690 Major Facilitator Superfamily IFY67_02296 PF01638 HxlR-like helix-turn-helix IFY67_02298 PF07690 Major Facilitator Superfamily IFY67_02299 PF09828 Chromate resistance exported protein IFY67_02305 PF02913 FAD linked oxidases, C-terminal domain IFY67_02305 PF01565 FAD binding domain IFY67_02306 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02307 PF00005 ABC transporter IFY67_02309 PF02633 Creatinine amidohydrolase IFY67_02310 PF01042 Endoribonuclease L-PSP IFY67_02311 PF07969 Amidohydrolase family IFY67_02312 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_02313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02313 PF03466 LysR substrate binding domain IFY67_02315 PF01979 Amidohydrolase family IFY67_02318 PF00202 Aminotransferase class-III IFY67_02321 PF13520 Amino acid permease IFY67_02324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02324 PF03466 LysR substrate binding domain IFY67_02330 PF00005 ABC transporter IFY67_02330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_02331 PF00005 ABC transporter IFY67_02331 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_02332 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02333 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02334 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_02336 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IFY67_02337 PF08220 DeoR-like helix-turn-helix domain IFY67_02337 PF00455 DeoR C terminal sensor domain IFY67_02339 PF00484 Carbonic anhydrase IFY67_02344 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IFY67_02344 PF10996 Beta-Casp domain IFY67_02344 PF00753 Metallo-beta-lactamase superfamily IFY67_02346 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02346 PF03466 LysR substrate binding domain IFY67_02348 PF00106 short chain dehydrogenase IFY67_02349 PF04717 Type VI secretion system, phage-baseplate injector IFY67_02349 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IFY67_02349 PF13296 Putative type VI secretion system Rhs element Vgr IFY67_02357 PF01527 Transposase IFY67_02358 PF13276 HTH-like domain IFY67_02358 PF00665 Integrase core domain IFY67_02358 PF13333 Integrase core domain IFY67_02359 PF13276 HTH-like domain IFY67_02359 PF00665 Integrase core domain IFY67_02359 PF13333 Integrase core domain IFY67_02363 PF03641 Possible lysine decarboxylase IFY67_02365 PF01554 MatE IFY67_02366 PF00677 Lumazine binding domain IFY67_02368 PF07690 Major Facilitator Superfamily IFY67_02369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02369 PF03466 LysR substrate binding domain IFY67_02370 PF03466 LysR substrate binding domain IFY67_02370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02371 PF00356 Bacterial regulatory proteins, lacI family IFY67_02373 PF07690 Major Facilitator Superfamily IFY67_02374 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IFY67_02374 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IFY67_02376 PF00877 NlpC/P60 family IFY67_02377 PF00462 Glutaredoxin IFY67_02378 PF00929 Exonuclease IFY67_02379 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IFY67_02380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IFY67_02381 PF16925 Tetracyclin repressor-like, C-terminal domain IFY67_02381 PF00440 Bacterial regulatory proteins, tetR family IFY67_02382 PF06945 Protein of unknown function (DUF1289) IFY67_02383 PF00248 Aldo/keto reductase family IFY67_02384 PF00080 Copper/zinc superoxide dismutase (SODC) IFY67_02385 PF04632 Fusaric acid resistance protein family IFY67_02386 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_02386 PF00529 HlyD membrane-fusion protein of T1SS IFY67_02387 PF07869 Protein of unknown function (DUF1656) IFY67_02388 PF01047 MarR family IFY67_02389 PF00990 Diguanylate cyclase, GGDEF domain IFY67_02389 PF17158 Membrane-associated sensor, integral membrane domain IFY67_02390 PF05433 Glycine zipper 2TM domain IFY67_02391 PF03702 Anhydro-N-acetylmuramic acid kinase IFY67_02392 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme IFY67_02393 PF01243 Pyridoxamine 5'-phosphate oxidase IFY67_02393 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IFY67_02394 PF00579 tRNA synthetases class I (W and Y) IFY67_02395 PF08543 Phosphomethylpyrimidine kinase IFY67_02396 PF02798 Glutathione S-transferase, N-terminal domain IFY67_02396 PF00043 Glutathione S-transferase, C-terminal domain IFY67_02397 PF00854 POT family IFY67_02398 PF00633 Helix-hairpin-helix motif IFY67_02398 PF00730 HhH-GPD superfamily base excision DNA repair protein IFY67_02398 PF10576 Iron-sulfur binding domain of endonuclease III IFY67_02399 PF02508 Rnf-Nqr subunit, membrane protein IFY67_02400 PF04205 FMN-binding domain IFY67_02401 PF03116 NQR2, RnfD, RnfE family IFY67_02402 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IFY67_02402 PF12838 4Fe-4S dicluster domain IFY67_02402 PF13375 RnfC Barrel sandwich hybrid domain IFY67_02402 PF10531 SLBB domain IFY67_02403 PF04060 Putative Fe-S cluster IFY67_02404 PF02508 Rnf-Nqr subunit, membrane protein IFY67_02405 PF10754 Protein of unknown function (DUF2569) IFY67_02406 PF05321 Haemolysin expression modulating protein IFY67_02407 PF00232 Glycosyl hydrolase family 1 IFY67_02408 PF00232 Glycosyl hydrolase family 1 IFY67_02409 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_02409 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_02410 PF00962 Adenosine/AMP deaminase IFY67_02411 PF07690 Major Facilitator Superfamily IFY67_02412 PF01638 HxlR-like helix-turn-helix IFY67_02415 PF01292 Prokaryotic cytochrome b561 IFY67_02416 PF02583 Metal-sensitive transcriptional repressor IFY67_02417 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_02417 PF00107 Zinc-binding dehydrogenase IFY67_02418 PF01011 PQQ enzyme repeat IFY67_02419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02419 PF03466 LysR substrate binding domain IFY67_02420 PF00775 Dioxygenase IFY67_02421 PF00775 Dioxygenase IFY67_02421 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IFY67_02422 PF07063 Domain of unknown function (DUF1338) IFY67_02423 PF00135 Carboxylesterase family IFY67_02424 PF00107 Zinc-binding dehydrogenase IFY67_02424 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_02425 PF04349 Periplasmic glucan biosynthesis protein, MdoG IFY67_02426 PF13302 Acetyltransferase (GNAT) domain IFY67_02427 PF18836 Beta solenoid repeat from YDCK IFY67_02428 PF03595 Voltage-dependent anion channel IFY67_02429 PF03848 Tellurite resistance protein TehB IFY67_02430 PF11769 Protein of unknown function (DUF3313) IFY67_02432 PF06445 GyrI-like small molecule binding domain IFY67_02432 PF12833 Helix-turn-helix domain IFY67_02433 PF03594 Benzoate membrane transport protein IFY67_02434 PF07883 Cupin domain IFY67_02434 PF01381 Helix-turn-helix IFY67_02435 PF12392 Collagenase IFY67_02435 PF01136 Peptidase family U32 IFY67_02439 PF02322 Cytochrome bd terminal oxidase subunit II IFY67_02440 PF01654 Cytochrome bd terminal oxidase subunit I IFY67_02442 PF00392 Bacterial regulatory proteins, gntR family IFY67_02442 PF00155 Aminotransferase class I and II IFY67_02443 PF00155 Aminotransferase class I and II IFY67_02443 PF00392 Bacterial regulatory proteins, gntR family IFY67_02444 PF13416 Bacterial extracellular solute-binding protein IFY67_02445 PF13416 Bacterial extracellular solute-binding protein IFY67_02446 PF08402 TOBE domain IFY67_02446 PF00005 ABC transporter IFY67_02447 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02448 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02449 PF00171 Aldehyde dehydrogenase family IFY67_02452 PF10753 Toxin GhoT_OrtT IFY67_02453 PF00364 Biotin-requiring enzyme IFY67_02453 PF00561 alpha/beta hydrolase fold IFY67_02454 PF00171 Aldehyde dehydrogenase family IFY67_02455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_02456 PF10735 Protein of unknown function (DUF2526) IFY67_02457 PF04657 Putative inner membrane exporter, YdcZ IFY67_02458 PF00583 Acetyltransferase (GNAT) family IFY67_02459 PF01381 Helix-turn-helix IFY67_02459 PF08671 Anti-repressor SinI IFY67_02460 PF16884 N-terminal domain of oxidoreductase IFY67_02460 PF00107 Zinc-binding dehydrogenase IFY67_02461 PF01156 Inosine-uridine preferring nucleoside hydrolase IFY67_02462 PF04175 Protein of unknown function (DUF406) IFY67_02463 PF01979 Amidohydrolase family IFY67_02465 PF07715 TonB-dependent Receptor Plug Domain IFY67_02465 PF00593 TonB dependent receptor IFY67_02468 PF00324 Amino acid permease IFY67_02469 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02469 PF03466 LysR substrate binding domain IFY67_02470 PF01202 Shikimate kinase IFY67_02471 PF00296 Luciferase-like monooxygenase IFY67_02472 PF07687 Peptidase dimerisation domain IFY67_02472 PF01546 Peptidase family M20/M25/M40 IFY67_02473 PF00296 Luciferase-like monooxygenase IFY67_02474 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_02476 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02477 PF00005 ABC transporter IFY67_02479 PF13417 Glutathione S-transferase, N-terminal domain IFY67_02480 PF01361 Tautomerase enzyme IFY67_02481 PF01613 Flavin reductase like domain IFY67_02482 PF17912 MalK OB fold domain IFY67_02482 PF00005 ABC transporter IFY67_02484 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02485 PF00797 N-acetyltransferase IFY67_02486 PF02665 Nitrate reductase gamma subunit IFY67_02487 PF02613 Nitrate reductase delta subunit IFY67_02488 PF14711 Respiratory nitrate reductase beta C-terminal IFY67_02488 PF13247 4Fe-4S dicluster domain IFY67_02489 PF14710 Respiratory nitrate reductase alpha N-terminal IFY67_02489 PF01568 Molydopterin dinucleotide binding domain IFY67_02489 PF00384 Molybdopterin oxidoreductase IFY67_02490 PF07690 Major Facilitator Superfamily IFY67_02492 PF07690 Major Facilitator Superfamily IFY67_02493 PF01614 Bacterial transcriptional regulator IFY67_02493 PF09339 IclR helix-turn-helix domain IFY67_02495 PF13378 Enolase C-terminal domain-like IFY67_02495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IFY67_02496 PF02426 Muconolactone delta-isomerase IFY67_02497 PF00775 Dioxygenase IFY67_02497 PF04444 Catechol dioxygenase N terminus IFY67_02498 PF00355 Rieske [2Fe-2S] domain IFY67_02498 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IFY67_02499 PF00866 Ring hydroxylating beta subunit IFY67_02500 PF00175 Oxidoreductase NAD-binding domain IFY67_02500 PF00970 Oxidoreductase FAD-binding domain IFY67_02500 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_02501 PF00106 short chain dehydrogenase IFY67_02502 PF00892 EamA-like transporter family IFY67_02503 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_02503 PF00384 Molybdopterin oxidoreductase IFY67_02503 PF01568 Molydopterin dinucleotide binding domain IFY67_02504 PF00384 Molybdopterin oxidoreductase IFY67_02504 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_02504 PF01568 Molydopterin dinucleotide binding domain IFY67_02505 PF13247 4Fe-4S dicluster domain IFY67_02505 PF09163 Formate dehydrogenase N, transmembrane IFY67_02505 PF12800 4Fe-4S binding domain IFY67_02506 PF01292 Prokaryotic cytochrome b561 IFY67_02508 PF03976 Polyphosphate kinase 2 (PPK2) IFY67_02510 PF07690 Major Facilitator Superfamily IFY67_02512 PF00296 Luciferase-like monooxygenase IFY67_02513 PF00005 ABC transporter IFY67_02513 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_02514 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02514 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_02515 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02517 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_02518 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_02518 PF00107 Zinc-binding dehydrogenase IFY67_02519 PF00719 Inorganic pyrophosphatase IFY67_02522 PF12848 ABC transporter IFY67_02522 PF00005 ABC transporter IFY67_02524 PF00390 Malic enzyme, N-terminal domain IFY67_02524 PF03949 Malic enzyme, NAD binding domain IFY67_02525 PF08136 30S ribosomal protein subunit S22 family IFY67_02527 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02527 PF03466 LysR substrate binding domain IFY67_02528 PF10820 Protein of unknown function (DUF2543) IFY67_02531 PF05974 Domain of unknown function (DUF892) IFY67_02533 PF00128 Alpha amylase, catalytic domain IFY67_02533 PF16657 Maltogenic Amylase, C-terminal domain IFY67_02537 PF04239 Protein of unknown function (DUF421) IFY67_02539 PF04076 Bacterial OB fold (BOF) protein IFY67_02541 PF02566 OsmC-like protein IFY67_02544 PF16916 Dimerisation domain of Zinc Transporter IFY67_02544 PF01545 Cation efflux family IFY67_02545 PF01062 Bestrophin, RFP-TM, chloride channel IFY67_02546 PF00384 Molybdopterin oxidoreductase IFY67_02547 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02547 PF03466 LysR substrate binding domain IFY67_02548 PF00083 Sugar (and other) transporter IFY67_02549 PF02308 MgtC family IFY67_02550 PF03969 AFG1-like ATPase IFY67_02551 PF00141 Peroxidase IFY67_02552 PF03466 LysR substrate binding domain IFY67_02552 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02555 PF03717 Penicillin-binding Protein dimerisation domain IFY67_02555 PF00905 Penicillin binding protein transpeptidase domain IFY67_02556 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IFY67_02556 PF00117 Glutamine amidotransferase class-I IFY67_02558 PF00675 Insulinase (Peptidase family M16) IFY67_02559 PF04055 Radical SAM superfamily IFY67_02559 PF13186 Iron-sulfur cluster-binding domain IFY67_02560 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IFY67_02561 PF03070 TENA/THI-4/PQQC family IFY67_02562 PF12706 Beta-lactamase superfamily domain IFY67_02563 PF01244 Membrane dipeptidase (Peptidase family M19) IFY67_02564 PF00561 alpha/beta hydrolase fold IFY67_02565 PF00486 Transcriptional regulatory protein, C terminal IFY67_02565 PF00072 Response regulator receiver domain IFY67_02566 PF00512 His Kinase A (phospho-acceptor) domain IFY67_02566 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_02566 PF00672 HAMP domain IFY67_02567 PF00578 AhpC/TSA family IFY67_02567 PF17991 Thioredoxin like C-terminal domain IFY67_02567 PF02683 Cytochrome C biogenesis protein transmembrane region IFY67_02569 PF00282 Pyridoxal-dependent decarboxylase conserved domain IFY67_02570 PF00202 Aminotransferase class-III IFY67_02571 PF09084 NMT1/THI5 like IFY67_02572 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02573 PF00005 ABC transporter IFY67_02574 PF03070 TENA/THI-4/PQQC family IFY67_02576 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_02576 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_02578 PF00356 Bacterial regulatory proteins, lacI family IFY67_02579 PF00990 Diguanylate cyclase, GGDEF domain IFY67_02579 PF08448 PAS fold IFY67_02583 PF01979 Amidohydrolase family IFY67_02584 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IFY67_02586 PF01177 Asp/Glu/Hydantoin racemase IFY67_02592 PF00106 short chain dehydrogenase IFY67_02593 PF00117 Glutamine amidotransferase class-I IFY67_02594 PF12833 Helix-turn-helix domain IFY67_02594 PF02311 AraC-like ligand binding domain IFY67_02597 PF02801 Beta-ketoacyl synthase, C-terminal domain IFY67_02597 PF00109 Beta-ketoacyl synthase, N-terminal domain IFY67_02598 PF00109 Beta-ketoacyl synthase, N-terminal domain IFY67_02598 PF02801 Beta-ketoacyl synthase, C-terminal domain IFY67_02599 PF07690 Major Facilitator Superfamily IFY67_02600 PF13533 Biotin-lipoyl like IFY67_02602 PF01118 Semialdehyde dehydrogenase, NAD binding domain IFY67_02602 PF02774 Semialdehyde dehydrogenase, dimerisation domain IFY67_02605 PF01425 Amidase IFY67_02610 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02611 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02612 PF00005 ABC transporter IFY67_02613 PF00266 Aminotransferase class-V IFY67_02614 PF07687 Peptidase dimerisation domain IFY67_02614 PF01546 Peptidase family M20/M25/M40 IFY67_02615 PF03060 Nitronate monooxygenase IFY67_02616 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02616 PF03466 LysR substrate binding domain IFY67_02617 PF03466 LysR substrate binding domain IFY67_02617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02619 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IFY67_02620 PF13454 FAD-NAD(P)-binding IFY67_02621 PF13454 FAD-NAD(P)-binding IFY67_02622 PF00083 Sugar (and other) transporter IFY67_02622 PF07690 Major Facilitator Superfamily IFY67_02625 PF00440 Bacterial regulatory proteins, tetR family IFY67_02630 PF07690 Major Facilitator Superfamily IFY67_02631 PF00356 Bacterial regulatory proteins, lacI family IFY67_02632 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_02634 PF03611 PTS system sugar-specific permease component IFY67_02635 PF00834 Ribulose-phosphate 3 epimerase family IFY67_02637 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_02638 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_02638 PF02378 Phosphotransferase system, EIIC IFY67_02639 PF01810 LysE type translocator IFY67_02641 PF03466 LysR substrate binding domain IFY67_02641 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02642 PF03466 LysR substrate binding domain IFY67_02642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02643 PF00753 Metallo-beta-lactamase superfamily IFY67_02645 PF07687 Peptidase dimerisation domain IFY67_02645 PF01546 Peptidase family M20/M25/M40 IFY67_02648 PF02126 Phosphotriesterase family IFY67_02649 PF02653 Branched-chain amino acid transport system / permease component IFY67_02650 PF00005 ABC transporter IFY67_02651 PF00356 Bacterial regulatory proteins, lacI family IFY67_02653 PF00294 pfkB family carbohydrate kinase IFY67_02657 PF01476 LysM domain IFY67_02657 PF04972 BON domain IFY67_02658 PF07690 Major Facilitator Superfamily IFY67_02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_02660 PF00672 HAMP domain IFY67_02660 PF00512 His Kinase A (phospho-acceptor) domain IFY67_02661 PF02954 Bacterial regulatory protein, Fis family IFY67_02661 PF00072 Response regulator receiver domain IFY67_02661 PF14532 Sigma-54 interaction domain IFY67_02662 PF04229 GrpB protein IFY67_02662 PF13673 Acetyltransferase (GNAT) domain IFY67_02663 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02663 PF03466 LysR substrate binding domain IFY67_02664 PF00248 Aldo/keto reductase family IFY67_02665 PF00248 Aldo/keto reductase family IFY67_02666 PF08450 SMP-30/Gluconolactonase/LRE-like region IFY67_02667 PF00248 Aldo/keto reductase family IFY67_02672 PF01527 Transposase IFY67_02681 PF07517 SecA DEAD-like domain IFY67_02681 PF02810 SEC-C motif IFY67_02681 PF01043 SecA preprotein cross-linking domain IFY67_02681 PF07516 SecA Wing and Scaffold domain IFY67_02685 PF13276 HTH-like domain IFY67_02685 PF13683 Integrase core domain IFY67_02686 PF00303 Thymidylate synthase IFY67_02690 PF13592 Winged helix-turn helix IFY67_02690 PF13358 DDE superfamily endonuclease IFY67_02693 PF08220 DeoR-like helix-turn-helix domain IFY67_02693 PF00455 DeoR C terminal sensor domain IFY67_02694 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_02694 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_02695 PF01791 DeoC/LacD family aldolase IFY67_02696 PF08220 DeoR-like helix-turn-helix domain IFY67_02696 PF00455 DeoR C terminal sensor domain IFY67_02697 PF00834 Ribulose-phosphate 3 epimerase family IFY67_02698 PF00294 pfkB family carbohydrate kinase IFY67_02699 PF07690 Major Facilitator Superfamily IFY67_02701 PF13193 AMP-binding enzyme C-terminal domain IFY67_02701 PF00501 AMP-binding enzyme IFY67_02702 PF01144 Coenzyme A transferase IFY67_02704 PF02803 Thiolase, C-terminal domain IFY67_02704 PF00108 Thiolase, N-terminal domain IFY67_02705 PF07690 Major Facilitator Superfamily IFY67_02706 PF08450 SMP-30/Gluconolactonase/LRE-like region IFY67_02709 PF02595 Glycerate kinase family IFY67_02710 PF13556 PucR C-terminal helix-turn-helix domain IFY67_02710 PF17853 GGDEF-like domain IFY67_02710 PF05651 Putative sugar diacid recognition IFY67_02711 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IFY67_02711 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IFY67_02712 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02712 PF03466 LysR substrate binding domain IFY67_02714 PF07729 FCD domain IFY67_02714 PF00392 Bacterial regulatory proteins, gntR family IFY67_02715 PF02378 Phosphotransferase system, EIIC IFY67_02715 PF00367 phosphotransferase system, EIIB IFY67_02716 PF11975 Family 4 glycosyl hydrolase C-terminal domain IFY67_02716 PF02056 Family 4 glycosyl hydrolase IFY67_02717 PF00083 Sugar (and other) transporter IFY67_02718 PF00381 PTS HPr component phosphorylation site IFY67_02718 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_02721 PF00756 Putative esterase IFY67_02722 PF00563 EAL domain IFY67_02722 PF00990 Diguanylate cyclase, GGDEF domain IFY67_02722 PF13188 PAS domain IFY67_02722 PF03707 Bacterial signalling protein N terminal repeat IFY67_02725 PF00557 Metallopeptidase family M24 IFY67_02728 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_02728 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_02729 PF13954 PapC N-terminal domain IFY67_02729 PF13953 PapC C-terminal domain IFY67_02729 PF00577 Outer membrane usher protein IFY67_02730 PF13954 PapC N-terminal domain IFY67_02730 PF00577 Outer membrane usher protein IFY67_02730 PF13953 PapC C-terminal domain IFY67_02731 PF00577 Outer membrane usher protein IFY67_02731 PF13953 PapC C-terminal domain IFY67_02733 PF02638 Glycosyl hydrolase-like 10 IFY67_02734 PF07804 HipA-like C-terminal domain IFY67_02734 PF13657 HipA N-terminal domain IFY67_02735 PF01381 Helix-turn-helix IFY67_02736 PF00576 HIUase/Transthyretin family IFY67_02737 PF01014 Uricase IFY67_02737 PF09349 OHCU decarboxylase IFY67_02738 PF00860 Permease family IFY67_02739 PF00860 Permease family IFY67_02740 PF01494 FAD binding domain IFY67_02741 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02741 PF03466 LysR substrate binding domain IFY67_02742 PF00355 Rieske [2Fe-2S] domain IFY67_02743 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_02744 PF07690 Major Facilitator Superfamily IFY67_02745 PF12833 Helix-turn-helix domain IFY67_02748 PF09905 DNA-binding protein VF530 IFY67_02750 PF03180 NLPA lipoprotein IFY67_02751 PF09383 NIL domain IFY67_02751 PF00005 ABC transporter IFY67_02752 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02753 PF03060 Nitronate monooxygenase IFY67_02754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02754 PF03466 LysR substrate binding domain IFY67_02755 PF06779 Uncharacterised MFS-type transporter YbfB IFY67_02756 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IFY67_02757 PF07690 Major Facilitator Superfamily IFY67_02759 PF13649 Methyltransferase domain IFY67_02763 PF00583 Acetyltransferase (GNAT) family IFY67_02764 PF08125 Mannitol dehydrogenase C-terminal domain IFY67_02764 PF01232 Mannitol dehydrogenase Rossmann domain IFY67_02766 PF00990 Diguanylate cyclase, GGDEF domain IFY67_02767 PF13811 Domain of unknown function (DUF4186) IFY67_02768 PF04960 Glutaminase IFY67_02769 PF00171 Aldehyde dehydrogenase family IFY67_02770 PF03466 LysR substrate binding domain IFY67_02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02771 PF00583 Acetyltransferase (GNAT) family IFY67_02772 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IFY67_02772 PF00056 lactate/malate dehydrogenase, NAD binding domain IFY67_02773 PF00455 DeoR C terminal sensor domain IFY67_02773 PF08220 DeoR-like helix-turn-helix domain IFY67_02774 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IFY67_02775 PF07005 Sugar-binding N-terminal domain IFY67_02775 PF17042 Nucleotide-binding C-terminal domain IFY67_02776 PF00465 Iron-containing alcohol dehydrogenase IFY67_02777 PF00701 Dihydrodipicolinate synthetase family IFY67_02781 PF04074 YhcH/YjgK/YiaL IFY67_02783 PF02567 Phenazine biosynthesis-like protein IFY67_02784 PF07690 Major Facilitator Superfamily IFY67_02785 PF01914 MarC family integral membrane protein IFY67_02786 PF01047 MarR family IFY67_02787 PF12833 Helix-turn-helix domain IFY67_02788 PF13999 MarB protein IFY67_02789 PF00892 EamA-like transporter family IFY67_02790 PF07690 Major Facilitator Superfamily IFY67_02792 PF00005 ABC transporter IFY67_02793 PF00005 ABC transporter IFY67_02793 PF12399 Branched-chain amino acid ATP-binding cassette transporter IFY67_02794 PF02653 Branched-chain amino acid transport system / permease component IFY67_02795 PF02653 Branched-chain amino acid transport system / permease component IFY67_02796 PF13458 Periplasmic binding protein IFY67_02797 PF01717 Cobalamin-independent synthase, Catalytic domain IFY67_02799 PF01965 DJ-1/PfpI family IFY67_02799 PF12833 Helix-turn-helix domain IFY67_02802 PF00356 Bacterial regulatory proteins, lacI family IFY67_02803 PF00703 Glycosyl hydrolases family 2 IFY67_02803 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IFY67_02803 PF02929 Beta galactosidase small chain IFY67_02803 PF16353 Domain of unknown function(DUF4981) IFY67_02803 PF02837 Glycosyl hydrolases family 2, sugar binding domain IFY67_02804 PF01306 LacY proton/sugar symporter IFY67_02805 PF02463 RecF/RecN/SMC N terminal domain IFY67_02808 PF08220 DeoR-like helix-turn-helix domain IFY67_02808 PF00455 DeoR C terminal sensor domain IFY67_02809 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IFY67_02809 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IFY67_02810 PF17042 Nucleotide-binding C-terminal domain IFY67_02810 PF07005 Sugar-binding N-terminal domain IFY67_02811 PF00596 Class II Aldolase and Adducin N-terminal domain IFY67_02812 PF01261 Xylose isomerase-like TIM barrel IFY67_02813 PF02447 GntP family permease IFY67_02815 PF12833 Helix-turn-helix domain IFY67_02817 PF00563 EAL domain IFY67_02817 PF04940 Sensors of blue-light using FAD IFY67_02818 PF02464 Competence-damaged protein IFY67_02819 PF00011 Hsp20/alpha crystallin family IFY67_02823 PF02586 SOS response associated peptidase (SRAP) IFY67_02824 PF02311 AraC-like ligand binding domain IFY67_02824 PF12833 Helix-turn-helix domain IFY67_02826 PF01432 Peptidase family M3 IFY67_02827 PF00106 short chain dehydrogenase IFY67_02828 PF00392 Bacterial regulatory proteins, gntR family IFY67_02828 PF07729 FCD domain IFY67_02829 PF00582 Universal stress protein family IFY67_02830 PF08125 Mannitol dehydrogenase C-terminal domain IFY67_02830 PF01232 Mannitol dehydrogenase Rossmann domain IFY67_02831 PF07690 Major Facilitator Superfamily IFY67_02832 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IFY67_02833 PF06932 Protein of unknown function (DUF1283) IFY67_02834 PF13302 Acetyltransferase (GNAT) domain IFY67_02835 PF06788 Uncharacterised protein family (UPF0257) IFY67_02836 PF06649 Protein of unknown function (DUF1161) IFY67_02837 PF01568 Molydopterin dinucleotide binding domain IFY67_02837 PF00384 Molybdopterin oxidoreductase IFY67_02837 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_02838 PF12800 4Fe-4S binding domain IFY67_02838 PF13247 4Fe-4S dicluster domain IFY67_02839 PF04976 DMSO reductase anchor subunit (DmsC) IFY67_02840 PF02613 Nitrate reductase delta subunit IFY67_02841 PF00654 Voltage gated chloride channel IFY67_02843 PF00480 ROK family IFY67_02844 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02844 PF03466 LysR substrate binding domain IFY67_02845 PF07690 Major Facilitator Superfamily IFY67_02846 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IFY67_02849 PF00089 Trypsin IFY67_02850 PF00893 Small Multidrug Resistance protein IFY67_02851 PF00893 Small Multidrug Resistance protein IFY67_02852 PF01594 AI-2E family transporter IFY67_02853 PF16957 Malonate decarboxylase, alpha subunit, transporter IFY67_02854 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IFY67_02855 PF06857 Malonate decarboxylase delta subunit (MdcD) IFY67_02856 PF01039 Carboxyl transferase domain IFY67_02858 PF03547 Membrane transport protein IFY67_02859 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG IFY67_02860 PF00698 Acyl transferase domain IFY67_02861 PF03466 LysR substrate binding domain IFY67_02861 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02863 PF06039 Malate:quinone oxidoreductase (Mqo) IFY67_02864 PF13580 SIS domain IFY67_02866 PF17203 Single cache domain 3 IFY67_02866 PF00989 PAS fold IFY67_02866 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_02866 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IFY67_02867 PF00072 Response regulator receiver domain IFY67_02868 PF02424 ApbE family IFY67_02869 PF00890 FAD binding domain IFY67_02869 PF14537 Cytochrome c3 IFY67_02870 PF00939 Sodium:sulfate symporter transmembrane region IFY67_02871 PF05681 Fumarate hydratase (Fumerase) IFY67_02871 PF05683 Fumarase C-terminus IFY67_02873 PF02627 Carboxymuconolactone decarboxylase family IFY67_02874 PF12146 Serine aminopeptidase, S33 IFY67_02875 PF10397 Adenylosuccinate lyase C-terminus IFY67_02875 PF00206 Lyase IFY67_02876 PF00108 Thiolase, N-terminal domain IFY67_02876 PF02803 Thiolase, C-terminal domain IFY67_02877 PF01144 Coenzyme A transferase IFY67_02878 PF01144 Coenzyme A transferase IFY67_02879 PF09339 IclR helix-turn-helix domain IFY67_02879 PF01614 Bacterial transcriptional regulator IFY67_02880 PF01713 Smr domain IFY67_02881 PF03466 LysR substrate binding domain IFY67_02881 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02882 PF07687 Peptidase dimerisation domain IFY67_02882 PF01546 Peptidase family M20/M25/M40 IFY67_02883 PF01546 Peptidase family M20/M25/M40 IFY67_02884 PF03806 AbgT putative transporter family IFY67_02886 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IFY67_02886 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IFY67_02887 PF00325 Bacterial regulatory proteins, crp family IFY67_02887 PF00027 Cyclic nucleotide-binding domain IFY67_02888 PF00582 Universal stress protein family IFY67_02889 PF15930 Domain of unknown function IFY67_02890 PF02233 NAD(P) transhydrogenase beta subunit IFY67_02891 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IFY67_02891 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IFY67_02891 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IFY67_02892 PF07338 Protein of unknown function (DUF1471) IFY67_02893 PF13520 Amino acid permease IFY67_02894 PF13520 Amino acid permease IFY67_02895 PF13520 Amino acid permease IFY67_02897 PF06942 GlpM protein IFY67_02898 PF00072 Response regulator receiver domain IFY67_02898 PF00486 Transcriptional regulatory protein, C terminal IFY67_02900 PF00672 HAMP domain IFY67_02900 PF00512 His Kinase A (phospho-acceptor) domain IFY67_02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_02901 PF05472 DNA replication terminus site-binding protein (Ter protein) IFY67_02902 PF00206 Lyase IFY67_02902 PF10415 Fumarase C C-terminus IFY67_02903 PF05681 Fumarate hydratase (Fumerase) IFY67_02903 PF05683 Fumarase C-terminus IFY67_02904 PF01238 Phosphomannose isomerase type I IFY67_02905 PF06097 Bacterial protein of unknown function (DUF945) IFY67_02906 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IFY67_02906 PF00356 Bacterial regulatory proteins, lacI family IFY67_02907 PF00367 phosphotransferase system, EIIB IFY67_02907 PF02378 Phosphotransferase system, EIIC IFY67_02908 PF00155 Aminotransferase class I and II IFY67_02910 PF14001 YdfZ protein IFY67_02913 PF04143 Sulphur transport IFY67_02914 PF01206 Sulfurtransferase TusA IFY67_02915 PF07166 Protein of unknown function (DUF1398) IFY67_02916 PF01679 Proteolipid membrane potential modulator IFY67_02917 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IFY67_02917 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IFY67_02918 PF00171 Aldehyde dehydrogenase family IFY67_02919 PF02698 DUF218 domain IFY67_02920 PF00083 Sugar (and other) transporter IFY67_02921 PF00324 Amino acid permease IFY67_02922 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IFY67_02923 PF04996 Succinylarginine dihydrolase IFY67_02924 PF00171 Aldehyde dehydrogenase family IFY67_02925 PF04958 Arginine N-succinyltransferase beta subunit IFY67_02926 PF00202 Aminotransferase class-III IFY67_02927 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IFY67_02927 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IFY67_02928 PF00248 Aldo/keto reductase family IFY67_02929 PF03466 LysR substrate binding domain IFY67_02929 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02932 PF13533 Biotin-lipoyl like IFY67_02933 PF02321 Outer membrane efflux protein IFY67_02934 PF01596 O-methyltransferase IFY67_02935 PF00270 DEAD/DEAH box helicase IFY67_02935 PF11898 Domain of unknown function (DUF3418) IFY67_02935 PF04408 Helicase associated domain (HA2) IFY67_02935 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IFY67_02935 PF00271 Helicase conserved C-terminal domain IFY67_02936 PF02525 Flavodoxin-like fold IFY67_02938 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_02939 PF08223 PaaX-like protein C-terminal domain IFY67_02939 PF07848 PaaX-like protein IFY67_02940 PF14535 AMP-binding enzyme C-terminal domain IFY67_02940 PF00501 AMP-binding enzyme IFY67_02941 PF02803 Thiolase, C-terminal domain IFY67_02941 PF00108 Thiolase, N-terminal domain IFY67_02942 PF03061 Thioesterase superfamily IFY67_02943 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IFY67_02943 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IFY67_02943 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IFY67_02944 PF00378 Enoyl-CoA hydratase/isomerase IFY67_02945 PF00378 Enoyl-CoA hydratase/isomerase IFY67_02946 PF00970 Oxidoreductase FAD-binding domain IFY67_02946 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_02946 PF00175 Oxidoreductase NAD-binding domain IFY67_02947 PF01883 Iron-sulfur cluster assembly protein IFY67_02948 PF05138 Phenylacetic acid catabolic protein IFY67_02949 PF06243 Phenylacetic acid degradation B IFY67_02950 PF05138 Phenylacetic acid catabolic protein IFY67_02951 PF01575 MaoC like domain IFY67_02951 PF00171 Aldehyde dehydrogenase family IFY67_02952 PF02727 Copper amine oxidase, N2 domain IFY67_02952 PF02728 Copper amine oxidase, N3 domain IFY67_02952 PF01179 Copper amine oxidase, enzyme domain IFY67_02952 PF07833 Copper amine oxidase N-terminal domain IFY67_02955 PF07687 Peptidase dimerisation domain IFY67_02955 PF01546 Peptidase family M20/M25/M40 IFY67_02957 PF01042 Endoribonuclease L-PSP IFY67_02961 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02961 PF03466 LysR substrate binding domain IFY67_02962 PF00005 ABC transporter IFY67_02963 PF05721 Phytanoyl-CoA dioxygenase (PhyH) IFY67_02964 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_02966 PF02558 Ketopantoate reductase PanE/ApbA IFY67_02966 PF08546 Ketopantoate reductase PanE/ApbA C terminal IFY67_02967 PF00171 Aldehyde dehydrogenase family IFY67_02968 PF12833 Helix-turn-helix domain IFY67_02968 PF14525 AraC-binding-like domain IFY67_02969 PF07027 Protein of unknown function (DUF1318) IFY67_02970 PF13617 YnbE-like lipoprotein IFY67_02971 PF11739 Dicarboxylate transport IFY67_02972 PF09335 SNARE associated Golgi protein IFY67_02973 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFY67_02973 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IFY67_02974 PF03724 META domain IFY67_02975 PF03891 Domain of unknown function (DUF333) IFY67_02976 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_02976 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IFY67_02976 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IFY67_02976 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IFY67_02976 PF10371 Domain of unknown function IFY67_02977 PF00267 Gram-negative porin IFY67_02979 PF00582 Universal stress protein family IFY67_02980 PF01171 PP-loop family IFY67_02981 PF03880 DbpA RNA binding domain IFY67_02981 PF00271 Helicase conserved C-terminal domain IFY67_02981 PF00270 DEAD/DEAH box helicase IFY67_02982 PF01544 CorA-like Mg2+ transporter protein IFY67_02983 PF08220 DeoR-like helix-turn-helix domain IFY67_02983 PF00455 DeoR C terminal sensor domain IFY67_02984 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_02984 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_02987 PF00324 Amino acid permease IFY67_02988 PF01037 Lrp/AsnC ligand binding domain IFY67_02990 PF00155 Aminotransferase class I and II IFY67_02991 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_02992 PF00005 ABC transporter IFY67_02992 PF09383 NIL domain IFY67_02993 PF03180 NLPA lipoprotein IFY67_02994 PF00155 Aminotransferase class I and II IFY67_02995 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_02995 PF00107 Zinc-binding dehydrogenase IFY67_02996 PF00440 Bacterial regulatory proteins, tetR family IFY67_02998 PF00753 Metallo-beta-lactamase superfamily IFY67_02999 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_02999 PF03466 LysR substrate binding domain IFY67_03000 PF03466 LysR substrate binding domain IFY67_03000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03005 PF00440 Bacterial regulatory proteins, tetR family IFY67_03019 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IFY67_03019 PF13296 Putative type VI secretion system Rhs element Vgr IFY67_03019 PF04717 Type VI secretion system, phage-baseplate injector IFY67_03020 PF10431 C-terminal, D2-small domain, of ClpB protein IFY67_03020 PF17871 AAA lid domain IFY67_03020 PF07724 AAA domain (Cdc48 subfamily) IFY67_03020 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_03021 PF17871 AAA lid domain IFY67_03021 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_03021 PF10431 C-terminal, D2-small domain, of ClpB protein IFY67_03021 PF07724 AAA domain (Cdc48 subfamily) IFY67_03023 PF13488 Glycine zipper IFY67_03023 PF00691 OmpA family IFY67_03026 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IFY67_03028 PF01965 DJ-1/PfpI family IFY67_03029 PF01966 HD domain IFY67_03031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03031 PF03466 LysR substrate binding domain IFY67_03034 PF00248 Aldo/keto reductase family IFY67_03035 PF07690 Major Facilitator Superfamily IFY67_03036 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IFY67_03037 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03037 PF03466 LysR substrate binding domain IFY67_03039 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_03040 PF00246 Zinc carboxypeptidase IFY67_03041 PF13378 Enolase C-terminal domain-like IFY67_03041 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IFY67_03042 PF08534 Redoxin IFY67_03043 PF05145 Transition state regulatory protein AbrB IFY67_03044 PF18024 Helix-turn-helix domain IFY67_03044 PF00158 Sigma-54 interaction domain IFY67_03045 PF02056 Family 4 glycosyl hydrolase IFY67_03045 PF11975 Family 4 glycosyl hydrolase C-terminal domain IFY67_03046 PF03466 LysR substrate binding domain IFY67_03046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03047 PF05128 Domain of unknown function (DUF697) IFY67_03048 PF04317 YcjX-like family, DUF463 IFY67_03049 PF09584 Phage shock protein PspD (Phageshock_PspD) IFY67_03050 PF04024 PspC domain IFY67_03051 PF06667 Phage shock protein B IFY67_03052 PF04012 PspA/IM30 family IFY67_03053 PF02954 Bacterial regulatory protein, Fis family IFY67_03053 PF00158 Sigma-54 interaction domain IFY67_03054 PF07690 Major Facilitator Superfamily IFY67_03055 PF07687 Peptidase dimerisation domain IFY67_03055 PF01546 Peptidase family M20/M25/M40 IFY67_03056 PF12833 Helix-turn-helix domain IFY67_03058 PF13460 NAD(P)H-binding IFY67_03059 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_03060 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03061 PF02586 SOS response associated peptidase (SRAP) IFY67_03064 PF11798 IMS family HHH motif IFY67_03064 PF13438 Domain of unknown function (DUF4113) IFY67_03064 PF11799 impB/mucB/samB family C-terminal domain IFY67_03064 PF00817 impB/mucB/samB family IFY67_03065 PF00717 Peptidase S24-like IFY67_03068 PF13737 Transposase DDE domain IFY67_03077 PF06791 Prophage tail length tape measure protein IFY67_03093 PF03592 Terminase small subunit IFY67_03093 PF10668 Phage terminase small subunit IFY67_03103 PF03589 Antitermination protein IFY67_03104 PF05866 Endodeoxyribonuclease RusA IFY67_03105 PF07102 Protein of unknown function (DUF1364) IFY67_03107 PF06183 DinI-like family IFY67_03108 PF06440 DNA polymerase III, theta subunit IFY67_03119 PF01695 IstB-like ATP binding protein IFY67_03125 PF07358 Protein of unknown function (DUF1482) IFY67_03126 PF12684 PDDEXK-like domain of unknown function (DUF3799) IFY67_03126 PF06630 Enterobacterial exodeoxyribonuclease VIII IFY67_03132 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_03132 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03133 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_03133 PF00005 ABC transporter IFY67_03134 PF00005 ABC transporter IFY67_03135 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IFY67_03136 PF05962 HutD IFY67_03139 PF00575 S1 RNA binding domain IFY67_03139 PF00773 RNB domain IFY67_03139 PF08206 Ribonuclease B OB domain IFY67_03139 PF17876 Cold shock domain IFY67_03141 PF00455 DeoR C terminal sensor domain IFY67_03141 PF08220 DeoR-like helix-turn-helix domain IFY67_03142 PF05433 Glycine zipper 2TM domain IFY67_03143 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IFY67_03144 PF18073 Rubredoxin metal binding domain IFY67_03145 PF06305 Lipopolysaccharide assembly protein A domain IFY67_03146 PF01569 PAP2 superfamily IFY67_03147 PF00925 GTP cyclohydrolase II IFY67_03148 PF00694 Aconitase C-terminal domain IFY67_03148 PF00330 Aconitase family (aconitate hydratase) IFY67_03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03150 PF03466 LysR substrate binding domain IFY67_03151 PF01396 Topoisomerase DNA binding C4 zinc finger IFY67_03151 PF01751 Toprim domain IFY67_03151 PF08272 Topoisomerase I zinc-ribbon-like IFY67_03151 PF01131 DNA topoisomerase IFY67_03152 PF10692 Protein of unknown function (DUF2498) IFY67_03153 PF01343 Peptidase family S49 IFY67_03153 PF08496 Peptidase family S49 N-terminal IFY67_03154 PF00106 short chain dehydrogenase IFY67_03155 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IFY67_03155 PF12557 Cob(I)alamin adenosyltransferase N terminal IFY67_03156 PF01479 S4 domain IFY67_03156 PF00849 RNA pseudouridylate synthase IFY67_03164 PF00589 Phage integrase family IFY67_03169 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03169 PF03466 LysR substrate binding domain IFY67_03171 PF01300 Telomere recombination IFY67_03172 PF02811 PHP domain IFY67_03173 PF00425 chorismate binding enzyme IFY67_03173 PF04715 Anthranilate synthase component I, N terminal region IFY67_03174 PF02885 Glycosyl transferase family, helical bundle domain IFY67_03174 PF00117 Glutamine amidotransferase class-I IFY67_03174 PF00591 Glycosyl transferase family, a/b domain IFY67_03175 PF00218 Indole-3-glycerol phosphate synthase IFY67_03175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IFY67_03176 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_03177 PF00290 Tryptophan synthase alpha chain IFY67_03178 PF05161 MOFRL family IFY67_03178 PF13660 Domain of unknown function (DUF4147) IFY67_03179 PF00180 Isocitrate/isopropylmalate dehydrogenase IFY67_03180 PF07690 Major Facilitator Superfamily IFY67_03181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03181 PF03466 LysR substrate binding domain IFY67_03185 PF00106 short chain dehydrogenase IFY67_03186 PF07715 TonB-dependent Receptor Plug Domain IFY67_03186 PF00593 TonB dependent receptor IFY67_03187 PF00593 TonB dependent receptor IFY67_03187 PF07715 TonB-dependent Receptor Plug Domain IFY67_03188 PF18331 PKHD-type hydroxylase C-terminal domain IFY67_03188 PF13640 2OG-Fe(II) oxygenase superfamily IFY67_03189 PF03922 OmpW family IFY67_03190 PF03692 Putative zinc- or iron-chelating domain IFY67_03192 PF04279 Intracellular septation protein A IFY67_03193 PF00593 TonB dependent receptor IFY67_03193 PF07715 TonB-dependent Receptor Plug Domain IFY67_03194 PF03061 Thioesterase superfamily IFY67_03195 PF14002 YniB-like protein IFY67_03196 PF13419 Haloacid dehalogenase-like hydrolase IFY67_03198 PF04307 LexA-binding, inner membrane-associated putative hydrolase IFY67_03199 PF00375 Sodium:dicarboxylate symporter family IFY67_03200 PF10729 Cell division activator CedA IFY67_03201 PF18011 C-terminal domain found in long catalases IFY67_03201 PF06628 Catalase-related immune-responsive IFY67_03201 PF00199 Catalase IFY67_03202 PF04794 YdjC-like protein IFY67_03203 PF02056 Family 4 glycosyl hydrolase IFY67_03203 PF11975 Family 4 glycosyl hydrolase C-terminal domain IFY67_03204 PF07883 Cupin domain IFY67_03204 PF12833 Helix-turn-helix domain IFY67_03205 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IFY67_03206 PF02378 Phosphotransferase system, EIIC IFY67_03207 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_03208 PF04355 SmpA / OmlA family IFY67_03209 PF02540 NAD synthase IFY67_03211 PF07813 LTXXQ motif family protein IFY67_03212 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IFY67_03213 PF04996 Succinylarginine dihydrolase IFY67_03214 PF00171 Aldehyde dehydrogenase family IFY67_03215 PF04958 Arginine N-succinyltransferase beta subunit IFY67_03216 PF00202 Aminotransferase class-III IFY67_03217 PF03372 Endonuclease/Exonuclease/phosphatase family IFY67_03218 PF09335 SNARE associated Golgi protein IFY67_03219 PF09335 SNARE associated Golgi protein IFY67_03220 PF02627 Carboxymuconolactone decarboxylase family IFY67_03221 PF13416 Bacterial extracellular solute-binding protein IFY67_03222 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03223 PF00005 ABC transporter IFY67_03224 PF00581 Rhodanese-like domain IFY67_03225 PF01066 CDP-alcohol phosphatidyltransferase IFY67_03226 PF00293 NUDIX domain IFY67_03227 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IFY67_03227 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IFY67_03228 PF16197 Ketoacyl-synthetase C-terminal extension IFY67_03228 PF00550 Phosphopantetheine attachment site IFY67_03228 PF08659 KR domain IFY67_03228 PF00109 Beta-ketoacyl synthase, N-terminal domain IFY67_03228 PF14765 Polyketide synthase dehydratase IFY67_03228 PF00698 Acyl transferase domain IFY67_03228 PF02801 Beta-ketoacyl synthase, C-terminal domain IFY67_03228 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_03229 PF01751 Toprim domain IFY67_03229 PF01131 DNA topoisomerase IFY67_03230 PF00586 AIR synthase related protein, N-terminal domain IFY67_03230 PF02769 AIR synthase related protein, C-terminal domain IFY67_03231 PF01569 PAP2 superfamily IFY67_03232 PF00881 Nitroreductase family IFY67_03233 PF01343 Peptidase family S49 IFY67_03234 PF00710 Asparaginase, N-terminal IFY67_03234 PF17763 Glutaminase/Asparaginase C-terminal domain IFY67_03235 PF00857 Isochorismatase family IFY67_03236 PF00704 Glycosyl hydrolases family 18 IFY67_03236 PF00041 Fibronectin type III domain IFY67_03237 PF01844 HNH endonuclease IFY67_03238 PF07023 Protein of unknown function (DUF1315) IFY67_03239 PF01641 SelR domain IFY67_03240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IFY67_03240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IFY67_03241 PF01263 Aldose 1-epimerase IFY67_03242 PF00248 Aldo/keto reductase family IFY67_03243 PF06629 MltA-interacting protein MipA IFY67_03244 PF08298 PrkA AAA domain IFY67_03244 PF06798 PrkA serine protein kinase C-terminal domain IFY67_03245 PF04285 Protein of unknown function (DUF444) IFY67_03247 PF00255 Glutathione peroxidase IFY67_03249 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03249 PF03466 LysR substrate binding domain IFY67_03250 PF07690 Major Facilitator Superfamily IFY67_03252 PF03466 LysR substrate binding domain IFY67_03252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03253 PF13438 Domain of unknown function (DUF4113) IFY67_03253 PF11799 impB/mucB/samB family C-terminal domain IFY67_03253 PF00817 impB/mucB/samB family IFY67_03253 PF11798 IMS family HHH motif IFY67_03254 PF00717 Peptidase S24-like IFY67_03255 PF06183 DinI-like family IFY67_03256 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IFY67_03257 PF04073 Aminoacyl-tRNA editing domain IFY67_03258 PF04284 Protein of unknown function (DUF441) IFY67_03259 PF02311 AraC-like ligand binding domain IFY67_03259 PF12833 Helix-turn-helix domain IFY67_03260 PF07690 Major Facilitator Superfamily IFY67_03261 PF06418 CTP synthase N-terminus IFY67_03261 PF00117 Glutamine amidotransferase class-I IFY67_03262 PF04463 Protein of unknown function (DUF523) IFY67_03263 PF04343 Protein of unknown function, DUF488 IFY67_03264 PF03891 Domain of unknown function (DUF333) IFY67_03265 PF13185 GAF domain IFY67_03265 PF00990 Diguanylate cyclase, GGDEF domain IFY67_03267 PF10749 Protein of unknown function (DUF2534) IFY67_03268 PF01810 LysE type translocator IFY67_03269 PF03279 Bacterial lipid A biosynthesis acyltransferase IFY67_03270 PF00710 Asparaginase, N-terminal IFY67_03270 PF17763 Glutaminase/Asparaginase C-terminal domain IFY67_03271 PF01966 HD domain IFY67_03272 PF00990 Diguanylate cyclase, GGDEF domain IFY67_03273 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03273 PF03466 LysR substrate binding domain IFY67_03274 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IFY67_03279 PF02322 Cytochrome bd terminal oxidase subunit II IFY67_03280 PF01654 Cytochrome bd terminal oxidase subunit I IFY67_03281 PF05067 Manganese containing catalase IFY67_03282 PF05974 Domain of unknown function (DUF892) IFY67_03283 PF05974 Domain of unknown function (DUF892) IFY67_03284 PF10685 Stress-induced bacterial acidophilic repeat motif IFY67_03285 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_03285 PF00107 Zinc-binding dehydrogenase IFY67_03285 PF13823 Alcohol dehydrogenase GroES-associated IFY67_03286 PF06906 Protein of unknown function (DUF1272) IFY67_03290 PF00180 Isocitrate/isopropylmalate dehydrogenase IFY67_03291 PF03707 Bacterial signalling protein N terminal repeat IFY67_03291 PF00990 Diguanylate cyclase, GGDEF domain IFY67_03291 PF00563 EAL domain IFY67_03291 PF13188 PAS domain IFY67_03292 PF00990 Diguanylate cyclase, GGDEF domain IFY67_03292 PF05230 MASE2 domain IFY67_03310 PF01343 Peptidase family S49 IFY67_03312 PF03354 Phage Terminase IFY67_03318 PF00959 Phage lysozyme IFY67_03319 PF04971 Bacteriophage P21 holin S IFY67_03323 PF06147 Protein of unknown function (DUF968) IFY67_03325 PF01726 LexA DNA binding domain IFY67_03325 PF00717 Peptidase S24-like IFY67_03327 PF06183 DinI-like family IFY67_03338 PF06630 Enterobacterial exodeoxyribonuclease VIII IFY67_03338 PF12684 PDDEXK-like domain of unknown function (DUF3799) IFY67_03339 PF00589 Phage integrase family IFY67_03339 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain IFY67_03340 PF00180 Isocitrate/isopropylmalate dehydrogenase IFY67_03341 PF00849 RNA pseudouridylate synthase IFY67_03342 PF00293 NUDIX domain IFY67_03344 PF04356 Protein of unknown function (DUF489) IFY67_03345 PF00206 Lyase IFY67_03345 PF08328 Adenylosuccinate lyase C-terminal IFY67_03348 PF00072 Response regulator receiver domain IFY67_03348 PF00486 Transcriptional regulatory protein, C terminal IFY67_03349 PF08918 PhoQ Sensor IFY67_03349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_03350 PF08007 Cupin superfamily protein IFY67_03351 PF01546 Peptidase family M20/M25/M40 IFY67_03351 PF07687 Peptidase dimerisation domain IFY67_03352 PF00005 ABC transporter IFY67_03352 PF08402 TOBE domain IFY67_03353 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03354 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03355 PF13416 Bacterial extracellular solute-binding protein IFY67_03357 PF13193 AMP-binding enzyme C-terminal domain IFY67_03357 PF00501 AMP-binding enzyme IFY67_03358 PF13193 AMP-binding enzyme C-terminal domain IFY67_03358 PF00501 AMP-binding enzyme IFY67_03359 PF00456 Transketolase, thiamine diphosphate binding domain IFY67_03359 PF02780 Transketolase, C-terminal domain IFY67_03359 PF02779 Transketolase, pyrimidine binding domain IFY67_03360 PF00923 Transaldolase/Fructose-6-phosphate aldolase IFY67_03361 PF02502 Ribose/Galactose Isomerase IFY67_03362 PF03829 PTS system glucitol/sorbitol-specific IIA component IFY67_03363 PF03812 2-keto-3-deoxygluconate permease IFY67_03364 PF17042 Nucleotide-binding C-terminal domain IFY67_03364 PF07005 Sugar-binding N-terminal domain IFY67_03365 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IFY67_03366 PF00121 Triosephosphate isomerase IFY67_03367 PF04198 Putative sugar-binding domain IFY67_03369 PF02146 Sir2 family IFY67_03370 PF00480 ROK family IFY67_03371 PF12704 MacB-like periplasmic core domain IFY67_03371 PF02687 FtsX-like permease family IFY67_03372 PF02687 FtsX-like permease family IFY67_03372 PF12704 MacB-like periplasmic core domain IFY67_03373 PF00005 ABC transporter IFY67_03374 PF12704 MacB-like periplasmic core domain IFY67_03374 PF02687 FtsX-like permease family IFY67_03375 PF17757 UvrB interaction domain IFY67_03375 PF02559 CarD-like/TRCF domain IFY67_03375 PF00270 DEAD/DEAH box helicase IFY67_03375 PF00271 Helicase conserved C-terminal domain IFY67_03375 PF03461 TRCF domain IFY67_03376 PF01476 LysM domain IFY67_03376 PF17969 L,D-transpeptidase C-terminal domain IFY67_03376 PF03734 L,D-transpeptidase catalytic domain IFY67_03377 PF07338 Protein of unknown function (DUF1471) IFY67_03378 PF00440 Bacterial regulatory proteins, tetR family IFY67_03379 PF07715 TonB-dependent Receptor Plug Domain IFY67_03379 PF00593 TonB dependent receptor IFY67_03380 PF05433 Glycine zipper 2TM domain IFY67_03381 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_03382 PF05728 Uncharacterised protein family (UPF0227) IFY67_03383 PF00933 Glycosyl hydrolase family 3 N terminal domain IFY67_03384 PF01636 Phosphotransferase enzyme family IFY67_03385 PF13036 Peptidoglycan-synthase activator LpoB IFY67_03386 PF07233 Protein of unknown function (DUF1425) IFY67_03387 PF01230 HIT domain IFY67_03388 PF02378 Phosphotransferase system, EIIC IFY67_03388 PF00367 phosphotransferase system, EIIB IFY67_03389 PF01026 TatD related DNase IFY67_03390 PF09115 DNA polymerase III, delta subunit, C terminal IFY67_03391 PF02223 Thymidylate kinase IFY67_03392 PF02618 YceG-like family IFY67_03393 PF01063 Amino-transferase class IV IFY67_03394 PF00109 Beta-ketoacyl synthase, N-terminal domain IFY67_03394 PF02801 Beta-ketoacyl synthase, C-terminal domain IFY67_03395 PF00550 Phosphopantetheine attachment site IFY67_03397 PF00698 Acyl transferase domain IFY67_03398 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IFY67_03398 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IFY67_03399 PF02504 Fatty acid synthesis protein IFY67_03400 PF01783 Ribosomal L32p protein family IFY67_03401 PF02620 Large ribosomal RNA subunit accumulation protein YceD IFY67_03402 PF02545 Maf-like protein IFY67_03403 PF01479 S4 domain IFY67_03403 PF00849 RNA pseudouridylate synthase IFY67_03404 PF12111 Polyribonucleotide phosphorylase C terminal IFY67_03404 PF10150 Ribonuclease E/G family IFY67_03404 PF00575 S1 RNA binding domain IFY67_03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03405 PF03466 LysR substrate binding domain IFY67_03406 PF07690 Major Facilitator Superfamily IFY67_03407 PF03023 Lipid II flippase MurJ IFY67_03408 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_03409 PF04337 Protein of unknown function, DUF480 IFY67_03410 PF13302 Acetyltransferase (GNAT) domain IFY67_03411 PF07690 Major Facilitator Superfamily IFY67_03412 PF07273 Protein of unknown function (DUF1439) IFY67_03413 PF01979 Amidohydrolase family IFY67_03414 PF06183 DinI-like family IFY67_03415 PF13991 BssS protein family IFY67_03416 PF01266 FAD dependent oxidoreductase IFY67_03417 PF10968 Protein of unknown function (DUF2770) IFY67_03418 PF12368 Rhodanase C-terminal IFY67_03418 PF17773 UPF0176 acylphosphatase like domain IFY67_03418 PF00581 Rhodanese-like domain IFY67_03419 PF03279 Bacterial lipid A biosynthesis acyltransferase IFY67_03420 PF07690 Major Facilitator Superfamily IFY67_03421 PF07690 Major Facilitator Superfamily IFY67_03422 PF13984 MsyB protein IFY67_03423 PF07119 Protein of unknown function (DUF1375) IFY67_03424 PF00535 Glycosyl transferase family 2 IFY67_03425 PF04349 Periplasmic glucan biosynthesis protein, MdoG IFY67_03426 PF01757 Acyltransferase family IFY67_03427 PF01757 Acyltransferase family IFY67_03428 PF00440 Bacterial regulatory proteins, tetR family IFY67_03428 PF13977 BetI-type transcriptional repressor, C-terminal IFY67_03429 PF01661 Macro domain IFY67_03430 PF06496 Protein of unknown function (DUF1097) IFY67_03431 PF02613 Nitrate reductase delta subunit IFY67_03432 PF02811 PHP domain IFY67_03433 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFY67_03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03435 PF03466 LysR substrate binding domain IFY67_03436 PF02678 Pirin IFY67_03436 PF05726 Pirin C-terminal cupin domain IFY67_03437 PF05726 Pirin C-terminal cupin domain IFY67_03437 PF02678 Pirin IFY67_03438 PF00857 Isochorismatase family IFY67_03440 PF01323 DSBA-like thioredoxin domain IFY67_03441 PF02562 PhoH-like protein IFY67_03442 PF04261 Dyp-type peroxidase family IFY67_03443 PF09375 Imelysin IFY67_03443 PF13473 Cupredoxin-like domain IFY67_03444 PF03239 Iron permease FTR1 family IFY67_03445 PF07670 Nucleoside recognition IFY67_03445 PF07662 Na+ dependent nucleoside transporter C-terminus IFY67_03445 PF01773 Na+ dependent nucleoside transporter N-terminus IFY67_03447 PF00474 Sodium:solute symporter family IFY67_03448 PF14850 DNA-binding domain of Proline dehydrogenase IFY67_03448 PF01619 Proline dehydrogenase IFY67_03448 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IFY67_03448 PF00171 Aldehyde dehydrogenase family IFY67_03450 PF08362 YcdC-like protein, C-terminal region IFY67_03450 PF00440 Bacterial regulatory proteins, tetR family IFY67_03451 PF00296 Luciferase-like monooxygenase IFY67_03452 PF00857 Isochorismatase family IFY67_03453 PF01042 Endoribonuclease L-PSP IFY67_03454 PF00561 alpha/beta hydrolase fold IFY67_03455 PF00881 Nitroreductase family IFY67_03456 PF01613 Flavin reductase like domain IFY67_03457 PF00860 Permease family IFY67_03459 PF03358 NADPH-dependent FMN reductase IFY67_03460 PF13993 YccJ-like protein IFY67_03461 PF00328 Histidine phosphatase superfamily (branch 2) IFY67_03462 PF01638 HxlR-like helix-turn-helix IFY67_03466 PF00324 Amino acid permease IFY67_03468 PF00120 Glutamine synthetase, catalytic domain IFY67_03469 PF07722 Peptidase C26 IFY67_03470 PF01381 Helix-turn-helix IFY67_03470 PF07883 Cupin domain IFY67_03471 PF00171 Aldehyde dehydrogenase family IFY67_03472 PF01266 FAD dependent oxidoreductase IFY67_03473 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03473 PF03466 LysR substrate binding domain IFY67_03474 PF00180 Isocitrate/isopropylmalate dehydrogenase IFY67_03475 PF02028 BCCT, betaine/carnitine/choline family transporter IFY67_03476 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IFY67_03476 PF00355 Rieske [2Fe-2S] domain IFY67_03477 PF00171 Aldehyde dehydrogenase family IFY67_03478 PF00970 Oxidoreductase FAD-binding domain IFY67_03478 PF00175 Oxidoreductase NAD-binding domain IFY67_03478 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_03480 PF00563 EAL domain IFY67_03480 PF12792 CSS motif domain associated with EAL IFY67_03482 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_03483 PF01027 Inhibitor of apoptosis-promoting Bax1 IFY67_03484 PF04358 DsrC like protein IFY67_03485 PF00708 Acylphosphatase IFY67_03486 PF12833 Helix-turn-helix domain IFY67_03487 PF01161 Phosphatidylethanolamine-binding protein IFY67_03488 PF10672 S-adenosylmethionine-dependent methyltransferase IFY67_03488 PF17785 PUA-like domain IFY67_03489 PF08755 Hemimethylated DNA-binding protein YccV like IFY67_03490 PF13380 CoA binding domain IFY67_03491 PF02142 MGS-like domain IFY67_03492 PF13361 UvrD-like helicase C-terminal domain IFY67_03492 PF12462 DNA helicase IV / RNA helicase N terminal IFY67_03492 PF00580 UvrD/REP helicase N-terminal domain IFY67_03493 PF13361 UvrD-like helicase C-terminal domain IFY67_03493 PF00580 UvrD/REP helicase N-terminal domain IFY67_03493 PF12462 DNA helicase IV / RNA helicase N terminal IFY67_03494 PF03733 Inner membrane component domain IFY67_03495 PF12805 FUSC-like inner membrane protein yccS IFY67_03496 PF04994 TfoX C-terminal domain IFY67_03496 PF04993 TfoX N-terminal domain IFY67_03497 PF03846 Cell division inhibitor SulA IFY67_03498 PF01389 OmpA-like transmembrane domain IFY67_03498 PF00691 OmpA family IFY67_03499 PF17414 MatP C-terminal ribbon-helix-helix domain IFY67_03499 PF06303 MatP N-terminal domain IFY67_03500 PF13654 AAA domain IFY67_03500 PF05362 Lon protease (S16) C-terminal proteolytic domain IFY67_03501 PF07977 FabA-like domain IFY67_03502 PF03886 ABC-type transport auxiliary lipoprotein component IFY67_03503 PF02470 MlaD protein IFY67_03504 PF04403 Paraquat-inducible protein A IFY67_03505 PF16326 ABC transporter C-terminal domain IFY67_03505 PF12848 ABC transporter IFY67_03505 PF00005 ABC transporter IFY67_03506 PF10672 S-adenosylmethionine-dependent methyltransferase IFY67_03506 PF02926 THUMP domain IFY67_03506 PF01170 Putative RNA methylase family UPF0020 IFY67_03507 PF03476 MOSC N-terminal beta barrel domain IFY67_03507 PF03473 MOSC domain IFY67_03507 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_03508 PF07126 Cell-division protein ZapC IFY67_03509 PF01180 Dihydroorotate dehydrogenase IFY67_03510 PF03358 NADPH-dependent FMN reductase IFY67_03511 PF09084 NMT1/THI5 like IFY67_03512 PF00296 Luciferase-like monooxygenase IFY67_03513 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03514 PF00005 ABC transporter IFY67_03515 PF01433 Peptidase family M1 domain IFY67_03515 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IFY67_03515 PF11940 Domain of unknown function (DUF3458) Ig-like fold IFY67_03516 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IFY67_03516 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IFY67_03517 PF01546 Peptidase family M20/M25/M40 IFY67_03517 PF07687 Peptidase dimerisation domain IFY67_03518 PF07687 Peptidase dimerisation domain IFY67_03518 PF01546 Peptidase family M20/M25/M40 IFY67_03520 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_03521 PF01037 Lrp/AsnC ligand binding domain IFY67_03522 PF00152 tRNA synthetases class II (D, K and N) IFY67_03522 PF01336 OB-fold nucleic acid binding domain IFY67_03523 PF00267 Gram-negative porin IFY67_03524 PF00155 Aminotransferase class I and II IFY67_03525 PF00753 Metallo-beta-lactamase superfamily IFY67_03527 PF01471 Putative peptidoglycan binding domain IFY67_03527 PF03734 L,D-transpeptidase catalytic domain IFY67_03528 PF16330 MukB hinge domain IFY67_03528 PF04310 MukB N-terminal IFY67_03529 PF04310 MukB N-terminal IFY67_03529 PF16330 MukB hinge domain IFY67_03530 PF04288 MukE-like family IFY67_03531 PF17192 MukF middle domain IFY67_03531 PF03882 MukF winged-helix domain IFY67_03531 PF17193 MukF C-terminal domain IFY67_03532 PF13847 Methyltransferase domain IFY67_03533 PF02698 DUF218 domain IFY67_03534 PF01636 Phosphotransferase enzyme family IFY67_03535 PF02348 Cytidylyltransferase IFY67_03536 PF03966 Trm112p-like protein IFY67_03537 PF06224 Winged helix DNA-binding domain IFY67_03538 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IFY67_03539 PF00664 ABC transporter transmembrane region IFY67_03539 PF00005 ABC transporter IFY67_03540 PF00753 Metallo-beta-lactamase superfamily IFY67_03540 PF03772 Competence protein IFY67_03541 PF00216 Bacterial DNA-binding protein IFY67_03542 PF00575 S1 RNA binding domain IFY67_03543 PF02224 Cytidylate kinase IFY67_03544 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IFY67_03545 PF00266 Aminotransferase class-V IFY67_03546 PF04239 Protein of unknown function (DUF421) IFY67_03547 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IFY67_03547 PF18381 YcaO cyclodehydratase C-terminal domain IFY67_03548 PF01226 Formate/nitrite transporter IFY67_03549 PF01228 Glycine radical IFY67_03549 PF02901 Pyruvate formate lyase-like IFY67_03550 PF04055 Radical SAM superfamily IFY67_03551 PF07690 Major Facilitator Superfamily IFY67_03552 PF04976 DMSO reductase anchor subunit (DmsC) IFY67_03553 PF13247 4Fe-4S dicluster domain IFY67_03553 PF12800 4Fe-4S binding domain IFY67_03554 PF01568 Molydopterin dinucleotide binding domain IFY67_03554 PF00384 Molybdopterin oxidoreductase IFY67_03554 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_03555 PF02403 Seryl-tRNA synthetase N-terminal domain IFY67_03555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFY67_03556 PF12002 MgsA AAA+ ATPase C terminal IFY67_03556 PF16193 AAA C-terminal domain IFY67_03556 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_03557 PF03548 Outer membrane lipoprotein carrier protein LolA IFY67_03558 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IFY67_03558 PF17854 FtsK alpha domain IFY67_03558 PF09397 Ftsk gamma domain IFY67_03558 PF01580 FtsK/SpoIIIE family IFY67_03559 PF01037 Lrp/AsnC ligand binding domain IFY67_03560 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_03561 PF00664 ABC transporter transmembrane region IFY67_03561 PF00005 ABC transporter IFY67_03562 PF00664 ABC transporter transmembrane region IFY67_03562 PF00005 ABC transporter IFY67_03563 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IFY67_03564 PF01176 Translation initiation factor 1A / IF-1 IFY67_03565 PF10431 C-terminal, D2-small domain, of ClpB protein IFY67_03565 PF02861 Clp amino terminal domain, pathogenicity island component IFY67_03565 PF07724 AAA domain (Cdc48 subfamily) IFY67_03565 PF17871 AAA lid domain IFY67_03565 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_03566 PF02617 ATP-dependent Clp protease adaptor protein ClpS IFY67_03567 PF00313 'Cold-shock' DNA-binding domain IFY67_03568 PF00005 ABC transporter IFY67_03568 PF02687 FtsX-like permease family IFY67_03568 PF12704 MacB-like periplasmic core domain IFY67_03569 PF02687 FtsX-like permease family IFY67_03569 PF00005 ABC transporter IFY67_03569 PF12704 MacB-like periplasmic core domain IFY67_03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_03571 PF11398 Protein of unknown function (DUF2813) IFY67_03572 PF00230 Major intrinsic protein IFY67_03573 PF00230 Major intrinsic protein IFY67_03574 PF03956 Lysine exporter LysO IFY67_03575 PF03063 Prismane/CO dehydrogenase family IFY67_03576 PF00175 Oxidoreductase NAD-binding domain IFY67_03576 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_03576 PF00970 Oxidoreductase FAD-binding domain IFY67_03579 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_03579 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_03579 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_03580 PF01212 Beta-eliminating lyase IFY67_03581 PF11066 Protein of unknown function (DUF2867) IFY67_03581 PF13460 NAD(P)H-binding IFY67_03582 PF01370 NAD dependent epimerase/dehydratase family IFY67_03583 PF01510 N-acetylmuramoyl-L-alanine amidase IFY67_03584 PF00360 Phytochrome region IFY67_03584 PF00563 EAL domain IFY67_03584 PF01590 GAF domain IFY67_03584 PF00990 Diguanylate cyclase, GGDEF domain IFY67_03586 PF12883 Protein of unknown function (DUF3828) IFY67_03587 PF00005 ABC transporter IFY67_03588 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_03589 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03590 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03591 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_03592 PF16736 Single Cache-like IFY67_03592 PF00989 PAS fold IFY67_03592 PF00512 His Kinase A (phospho-acceptor) domain IFY67_03592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_03593 PF00486 Transcriptional regulatory protein, C terminal IFY67_03593 PF00072 Response regulator receiver domain IFY67_03594 PF05958 tRNA (Uracil-5-)-methyltransferase IFY67_03595 PF10767 Protein of unknown function (DUF2593) IFY67_03596 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03597 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03598 PF08402 TOBE domain IFY67_03598 PF00005 ABC transporter IFY67_03599 PF13416 Bacterial extracellular solute-binding protein IFY67_03600 PF10722 Putative bacterial sensory transduction regulator IFY67_03601 PF08443 RimK-like ATP-grasp domain IFY67_03601 PF18030 RimK PreATP-grasp domain IFY67_03602 PF00881 Nitroreductase family IFY67_03603 PF07214 Protein of unknown function (DUF1418) IFY67_03604 PF00462 Glutaredoxin IFY67_03605 PF11045 Putative inner membrane protein of Enterobacteriaceae IFY67_03606 PF06826 Predicted Permease Membrane Region IFY67_03606 PF02080 TrkA-C domain IFY67_03607 PF00440 Bacterial regulatory proteins, tetR family IFY67_03608 PF07690 Major Facilitator Superfamily IFY67_03610 PF07690 Major Facilitator Superfamily IFY67_03611 PF01569 PAP2 superfamily IFY67_03612 PF08220 DeoR-like helix-turn-helix domain IFY67_03612 PF00455 DeoR C terminal sensor domain IFY67_03613 PF07943 Penicillin-binding protein 5, C-terminal domain IFY67_03613 PF00768 D-alanyl-D-alanine carboxypeptidase IFY67_03615 PF13417 Glutathione S-transferase, N-terminal domain IFY67_03615 PF00043 Glutathione S-transferase, C-terminal domain IFY67_03616 PF07995 Glucose / Sorbosone dehydrogenase IFY67_03617 PF10799 Biofilm formation protein (YliH/bssR) IFY67_03618 PF01306 LacY proton/sugar symporter IFY67_03619 PF00919 Uncharacterized protein family UPF0004 IFY67_03619 PF04055 Radical SAM superfamily IFY67_03619 PF18693 TRAM domain IFY67_03620 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03620 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_03621 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03622 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_03623 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_03623 PF00005 ABC transporter IFY67_03624 PF01112 Asparaginase IFY67_03625 PF03454 MoeA C-terminal region (domain IV) IFY67_03625 PF03453 MoeA N-terminal region (domain I and II) IFY67_03625 PF00994 Probable molybdopterin binding domain IFY67_03626 PF00899 ThiF family IFY67_03627 PF04055 Radical SAM superfamily IFY67_03628 PF01228 Glycine radical IFY67_03628 PF02901 Pyruvate formate lyase-like IFY67_03630 PF07350 Protein of unknown function (DUF1479) IFY67_03631 PF00356 Bacterial regulatory proteins, lacI family IFY67_03632 PF07690 Major Facilitator Superfamily IFY67_03633 PF16338 Domain of unknown function (DUF4968) IFY67_03633 PF17137 Domain of unknown function (DUF5110) IFY67_03633 PF01055 Glycosyl hydrolases family 31 IFY67_03633 PF13802 Galactose mutarotase-like IFY67_03634 PF00005 ABC transporter IFY67_03634 PF12848 ABC transporter IFY67_03635 PF13350 Tyrosine phosphatase family IFY67_03636 PF03734 L,D-transpeptidase catalytic domain IFY67_03636 PF17969 L,D-transpeptidase C-terminal domain IFY67_03637 PF00392 Bacterial regulatory proteins, gntR family IFY67_03637 PF07702 UTRA domain IFY67_03638 PF00232 Glycosyl hydrolase family 1 IFY67_03639 PF03600 Citrate transporter IFY67_03640 PF01325 Iron dependent repressor, N-terminal DNA binding domain IFY67_03640 PF02742 Iron dependent repressor, metal binding and dimerisation domain IFY67_03642 PF00884 Sulfatase IFY67_03643 PF13505 Outer membrane protein beta-barrel domain IFY67_03644 PF00892 EamA-like transporter family IFY67_03645 PF00210 Ferritin-like domain IFY67_03646 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_03647 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03648 PF00005 ABC transporter IFY67_03649 PF00924 Mechanosensitive ion channel IFY67_03650 PF05971 RNA methyltransferase IFY67_03651 PF01613 Flavin reductase like domain IFY67_03653 PF01258 Prokaryotic dksA/traR C4-type zinc finger IFY67_03654 PF07338 Protein of unknown function (DUF1471) IFY67_03655 PF02885 Glycosyl transferase family, helical bundle domain IFY67_03656 PF02885 Glycosyl transferase family, helical bundle domain IFY67_03657 PF00270 DEAD/DEAH box helicase IFY67_03657 PF06733 DEAD_2 IFY67_03657 PF13307 Helicase C-terminal domain IFY67_03658 PF00270 DEAD/DEAH box helicase IFY67_03658 PF00271 Helicase conserved C-terminal domain IFY67_03659 PF02779 Transketolase, pyrimidine binding domain IFY67_03659 PF02780 Transketolase, C-terminal domain IFY67_03660 PF00456 Transketolase, thiamine diphosphate binding domain IFY67_03662 PF07690 Major Facilitator Superfamily IFY67_03663 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03663 PF03466 LysR substrate binding domain IFY67_03664 PF00440 Bacterial regulatory proteins, tetR family IFY67_03664 PF09209 Tetracyclin repressor-like, C-terminal domain IFY67_03666 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_03667 PF00005 ABC transporter IFY67_03670 PF11076 Putative inner membrane protein YbhQ IFY67_03671 PF03372 Endonuclease/Exonuclease/phosphatase family IFY67_03672 PF13091 PLD-like domain IFY67_03673 PF03706 Lysylphosphatidylglycerol synthase TM region IFY67_03674 PF01027 Inhibitor of apoptosis-promoting Bax1 IFY67_03675 PF02391 MoaE protein IFY67_03676 PF01967 MoaC family IFY67_03677 PF00994 Probable molybdopterin binding domain IFY67_03678 PF06463 Molybdenum Cofactor Synthesis C IFY67_03678 PF04055 Radical SAM superfamily IFY67_03679 PF01933 Uncharacterised protein family UPF0052 IFY67_03680 PF08019 Phosphoethanolamine transferase EptA/EptB IFY67_03680 PF00884 Sulfatase IFY67_03681 PF00486 Transcriptional regulatory protein, C terminal IFY67_03681 PF00072 Response regulator receiver domain IFY67_03682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_03682 PF00512 His Kinase A (phospho-acceptor) domain IFY67_03684 PF02151 UvrB/uvrC motif IFY67_03684 PF12344 Ultra-violet resistance protein B IFY67_03684 PF17757 UvrB interaction domain IFY67_03684 PF04851 Type III restriction enzyme, res subunit IFY67_03684 PF00271 Helicase conserved C-terminal domain IFY67_03685 PF00005 ABC transporter IFY67_03687 PF08241 Methyltransferase domain IFY67_03688 PF00155 Aminotransferase class I and II IFY67_03689 PF04055 Radical SAM superfamily IFY67_03689 PF06968 Biotin and Thiamin Synthesis associated domain IFY67_03690 PF00202 Aminotransferase class-III IFY67_03691 PF01161 Phosphatidylethanolamine-binding protein IFY67_03692 PF00324 Amino acid permease IFY67_03693 PF00221 Aromatic amino acid lyase IFY67_03694 PF17392 Urocanase C-terminal domain IFY67_03694 PF17391 Urocanase N-terminal domain IFY67_03694 PF01175 Urocanase Rossmann-like domain IFY67_03695 PF00392 Bacterial regulatory proteins, gntR family IFY67_03695 PF07702 UTRA domain IFY67_03696 PF00491 Arginase family IFY67_03697 PF01979 Amidohydrolase family IFY67_03698 PF01095 Pectinesterase IFY67_03699 PF00689 Cation transporting ATPase, C-terminus IFY67_03699 PF00690 Cation transporter/ATPase, N-terminus IFY67_03700 PF00582 Universal stress protein family IFY67_03702 PF13533 Biotin-lipoyl like IFY67_03703 PF00873 AcrB/AcrD/AcrF family IFY67_03708 PF13411 MerR HTH family regulatory protein IFY67_03709 PF00563 EAL domain IFY67_03709 PF04940 Sensors of blue-light using FAD IFY67_03710 PF10798 Biofilm development protein YmgB/AriR IFY67_03712 PF10798 Biofilm development protein YmgB/AriR IFY67_03713 PF10282 Lactonase, 7-bladed beta-propeller IFY67_03715 PF00005 ABC transporter IFY67_03715 PF03459 TOBE domain IFY67_03716 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03718 PF10766 Multidrug efflux pump-associated protein AcrZ IFY67_03719 PF03459 TOBE domain IFY67_03719 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03720 PF00005 ABC transporter IFY67_03721 PF16363 GDP-mannose 4,6 dehydratase IFY67_03722 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IFY67_03722 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IFY67_03723 PF00288 GHMP kinases N terminal domain IFY67_03723 PF08544 GHMP kinases C terminal IFY67_03723 PF10509 Galactokinase galactose-binding signature IFY67_03724 PF01263 Aldose 1-epimerase IFY67_03725 PF00300 Histidine phosphatase superfamily (branch 1) IFY67_03726 PF00793 DAHP synthetase I family IFY67_03727 PF13985 YbgS-like protein IFY67_03728 PF13985 YbgS-like protein IFY67_03729 PF01545 Cation efflux family IFY67_03730 PF04973 Nicotinamide mononucleotide transporter IFY67_03731 PF02445 Quinolinate synthetase A protein IFY67_03739 PF13174 Tetratricopeptide repeat IFY67_03739 PF16331 TolA binding protein trimerisation IFY67_03740 PF00691 OmpA family IFY67_03741 PF04052 TolB amino-terminal domain IFY67_03741 PF07676 WD40-like Beta Propeller Repeat IFY67_03742 PF06519 TolA C-terminal IFY67_03743 PF02472 Biopolymer transport protein ExbD/TolR IFY67_03744 PF01618 MotA/TolQ/ExbB proton channel family IFY67_03745 PF03061 Thioesterase superfamily IFY67_03746 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) IFY67_03747 PF08173 Membrane bound YbgT-like protein IFY67_03748 PF02322 Cytochrome bd terminal oxidase subunit II IFY67_03749 PF01654 Cytochrome bd terminal oxidase subunit I IFY67_03750 PF02629 CoA binding domain IFY67_03750 PF00549 CoA-ligase IFY67_03751 PF08442 ATP-grasp domain IFY67_03751 PF00549 CoA-ligase IFY67_03752 PF02817 e3 binding domain IFY67_03752 PF00364 Biotin-requiring enzyme IFY67_03752 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IFY67_03753 PF16078 2-oxoglutarate dehydrogenase N-terminus IFY67_03753 PF02779 Transketolase, pyrimidine binding domain IFY67_03753 PF16870 2-oxoglutarate dehydrogenase C-terminal IFY67_03753 PF00676 Dehydrogenase E1 component IFY67_03754 PF13085 2Fe-2S iron-sulfur cluster binding domain IFY67_03755 PF02910 Fumarate reductase flavoprotein C-term IFY67_03755 PF00890 FAD binding domain IFY67_03756 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IFY67_03757 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IFY67_03758 PF00285 Citrate synthase, C-terminal domain IFY67_03759 PF06827 Zinc finger found in FPG and IleRS IFY67_03759 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IFY67_03759 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IFY67_03760 PF01470 Pyroglutamyl peptidase IFY67_03763 PF03746 LamB/YcsF family IFY67_03764 PF02626 Carboxyltransferase domain, subdomain A and B IFY67_03765 PF02682 Carboxyltransferase domain, subdomain C and D IFY67_03766 PF01784 NIF3 (NGG1p interacting factor 3) IFY67_03767 PF00854 POT family IFY67_03768 PF03441 FAD binding domain of DNA photolyase IFY67_03768 PF00875 DNA photolyase IFY67_03769 PF00875 DNA photolyase IFY67_03769 PF03441 FAD binding domain of DNA photolyase IFY67_03770 PF10725 Protein of unknown function (DUF2517) IFY67_03771 PF03814 Potassium-transporting ATPase A subunit IFY67_03773 PF02669 K+-transporting ATPase, c chain IFY67_03774 PF00512 His Kinase A (phospho-acceptor) domain IFY67_03774 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_03774 PF02702 Osmosensitive K+ channel His kinase sensor domain IFY67_03774 PF13493 Domain of unknown function (DUF4118) IFY67_03774 PF13492 GAF domain IFY67_03775 PF00486 Transcriptional regulatory protein, C terminal IFY67_03775 PF00072 Response regulator receiver domain IFY67_03777 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IFY67_03777 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IFY67_03777 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IFY67_03777 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IFY67_03778 PF03925 SeqA protein C-terminal domain IFY67_03778 PF17206 SeqA protein N-terminal domain IFY67_03779 PF12697 Alpha/beta hydrolase family IFY67_03780 PF01402 Ribbon-helix-helix protein, copG family IFY67_03781 PF00258 Flavodoxin IFY67_03782 PF01475 Ferric uptake regulator family IFY67_03783 PF07690 Major Facilitator Superfamily IFY67_03784 PF13982 YbfN-like lipoprotein IFY67_03785 PF03573 outer membrane porin, OprD family IFY67_03787 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IFY67_03787 PF00749 tRNA synthetases class I (E and Q), catalytic domain IFY67_03788 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IFY67_03788 PF00367 phosphotransferase system, EIIB IFY67_03788 PF02378 Phosphotransferase system, EIIC IFY67_03789 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IFY67_03790 PF01979 Amidohydrolase family IFY67_03791 PF01047 MarR family IFY67_03791 PF00480 ROK family IFY67_03792 PF13344 Haloacid dehalogenase-like hydrolase IFY67_03793 PF00733 Asparagine synthase IFY67_03793 PF13537 Glutamine amidotransferase domain IFY67_03801 PF01494 FAD binding domain IFY67_03802 PF00919 Uncharacterized protein family UPF0004 IFY67_03802 PF01938 TRAM domain IFY67_03802 PF04055 Radical SAM superfamily IFY67_03803 PF02562 PhoH-like protein IFY67_03804 PF02130 Uncharacterized protein family UPF0054 IFY67_03805 PF03471 Transporter associated domain IFY67_03805 PF00571 CBS domain IFY67_03806 PF00795 Carbon-nitrogen hydrolase IFY67_03807 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_03808 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03809 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03810 PF00005 ABC transporter IFY67_03811 PF08479 POTRA domain, ShlB-type IFY67_03811 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IFY67_03811 PF17287 POTRA domain IFY67_03812 PF04829 Pre-toxin domain with VENN motif IFY67_03812 PF05594 Haemagluttinin repeat IFY67_03812 PF14436 Bacterial EndoU nuclease IFY67_03812 PF13332 Hemagglutinin repeat IFY67_03812 PF05860 haemagglutination activity domain IFY67_03813 PF07295 Zinc-ribbon containing domain IFY67_03814 PF13603 Leucyl-tRNA synthetase, Domain 2 IFY67_03814 PF08264 Anticodon-binding domain of tRNA IFY67_03814 PF00133 tRNA synthetases class I (I, L, M and V) IFY67_03815 PF04390 Lipopolysaccharide-assembly IFY67_03816 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IFY67_03816 PF06144 DNA polymerase III, delta subunit IFY67_03817 PF01467 Cytidylyltransferase-like IFY67_03818 PF00300 Histidine phosphatase superfamily (branch 1) IFY67_03820 PF02590 Predicted SPOUT methyltransferase IFY67_03821 PF03717 Penicillin-binding Protein dimerisation domain IFY67_03821 PF00905 Penicillin binding protein transpeptidase domain IFY67_03822 PF01098 Cell cycle protein IFY67_03823 PF03330 Lytic transglycolase IFY67_03823 PF05036 Sporulation related domain IFY67_03824 PF07943 Penicillin-binding protein 5, C-terminal domain IFY67_03824 PF00768 D-alanyl-D-alanine carboxypeptidase IFY67_03825 PF04359 Protein of unknown function (DUF493) IFY67_03826 PF03099 Biotin/lipoate A/B protein ligase family IFY67_03827 PF03466 LysR substrate binding domain IFY67_03827 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03828 PF04055 Radical SAM superfamily IFY67_03828 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IFY67_03829 PF02416 mttA/Hcf106 family IFY67_03830 PF00795 Carbon-nitrogen hydrolase IFY67_03831 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IFY67_03832 PF00313 'Cold-shock' DNA-binding domain IFY67_03833 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP IFY67_03834 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP IFY67_03835 PF03606 C4-dicarboxylate anaerobic carrier IFY67_03836 PF00445 Ribonuclease T2 family IFY67_03837 PF14760 Rnk N-terminus IFY67_03837 PF01272 Transcription elongation factor, GreA/GreB, C-term IFY67_03838 PF00582 Universal stress protein family IFY67_03839 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_03839 PF13192 Thioredoxin domain IFY67_03840 PF10417 C-terminal domain of 1-Cys peroxiredoxin IFY67_03840 PF00578 AhpC/TSA family IFY67_03841 PF13098 Thioredoxin-like domain IFY67_03842 PF03466 LysR substrate binding domain IFY67_03842 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03843 PF11922 Domain of unknown function (DUF3440) IFY67_03843 PF01507 Phosphoadenosine phosphosulfate reductase family IFY67_03844 PF02195 ParB-like nuclease domain IFY67_03845 PF00155 Aminotransferase class I and II IFY67_03847 PF03079 ARD/ARD' family IFY67_03848 PF01568 Molydopterin dinucleotide binding domain IFY67_03848 PF00384 Molybdopterin oxidoreductase IFY67_03850 PF00005 ABC transporter IFY67_03851 PF02653 Branched-chain amino acid transport system / permease component IFY67_03852 PF02653 Branched-chain amino acid transport system / permease component IFY67_03854 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFY67_03854 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IFY67_03855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_03855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_03856 PF00596 Class II Aldolase and Adducin N-terminal domain IFY67_03857 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IFY67_03859 PF07969 Amidohydrolase family IFY67_03860 PF00356 Bacterial regulatory proteins, lacI family IFY67_03861 PF00459 Inositol monophosphatase family IFY67_03862 PF07690 Major Facilitator Superfamily IFY67_03863 PF00328 Histidine phosphatase superfamily (branch 2) IFY67_03864 PF01008 Initiation factor 2 subunit family IFY67_03865 PF01636 Phosphotransferase enzyme family IFY67_03868 PF02653 Branched-chain amino acid transport system / permease component IFY67_03869 PF00005 ABC transporter IFY67_03870 PF00465 Iron-containing alcohol dehydrogenase IFY67_03874 PF04328 Selenoprotein, putative IFY67_03875 PF13722 5TM C-terminal transporter carbon starvation CstA IFY67_03875 PF02554 Carbon starvation protein CstA IFY67_03876 PF03061 Thioesterase superfamily IFY67_03878 PF00550 Phosphopantetheine attachment site IFY67_03878 PF00857 Isochorismatase family IFY67_03879 PF13193 AMP-binding enzyme C-terminal domain IFY67_03879 PF00501 AMP-binding enzyme IFY67_03880 PF00425 chorismate binding enzyme IFY67_03881 PF01497 Periplasmic binding protein IFY67_03882 PF05977 Transmembrane secretion effector IFY67_03883 PF01032 FecCD transport family IFY67_03884 PF01032 FecCD transport family IFY67_03885 PF00005 ABC transporter IFY67_03886 PF00975 Thioesterase domain IFY67_03886 PF13193 AMP-binding enzyme C-terminal domain IFY67_03886 PF00501 AMP-binding enzyme IFY67_03886 PF00668 Condensation domain IFY67_03886 PF00550 Phosphopantetheine attachment site IFY67_03887 PF13193 AMP-binding enzyme C-terminal domain IFY67_03887 PF00668 Condensation domain IFY67_03887 PF00550 Phosphopantetheine attachment site IFY67_03887 PF00975 Thioesterase domain IFY67_03887 PF00501 AMP-binding enzyme IFY67_03888 PF03621 MbtH-like protein IFY67_03889 PF11806 Domain of unknown function (DUF3327) IFY67_03889 PF00756 Putative esterase IFY67_03890 PF07715 TonB-dependent Receptor Plug Domain IFY67_03890 PF00593 TonB dependent receptor IFY67_03891 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IFY67_03891 PF01648 4'-phosphopantetheinyl transferase superfamily IFY67_03892 PF02780 Transketolase, C-terminal domain IFY67_03892 PF02779 Transketolase, pyrimidine binding domain IFY67_03893 PF00456 Transketolase, thiamine diphosphate binding domain IFY67_03894 PF04198 Putative sugar-binding domain IFY67_03894 PF00325 Bacterial regulatory proteins, crp family IFY67_03895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_03895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_03896 PF13407 Periplasmic binding protein domain IFY67_03898 PF00005 ABC transporter IFY67_03899 PF02653 Branched-chain amino acid transport system / permease component IFY67_03903 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_03903 PF03466 LysR substrate binding domain IFY67_03905 PF00924 Mechanosensitive ion channel IFY67_03907 PF02028 BCCT, betaine/carnitine/choline family transporter IFY67_03908 PF13977 BetI-type transcriptional repressor, C-terminal IFY67_03908 PF00440 Bacterial regulatory proteins, tetR family IFY67_03909 PF00171 Aldehyde dehydrogenase family IFY67_03910 PF00732 GMC oxidoreductase IFY67_03910 PF05199 GMC oxidoreductase IFY67_03912 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_03913 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03914 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03914 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_03915 PF00005 ABC transporter IFY67_03915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_03916 PF00005 ABC transporter IFY67_03916 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_03917 PF00202 Aminotransferase class-III IFY67_03918 PF00202 Aminotransferase class-III IFY67_03919 PF00106 short chain dehydrogenase IFY67_03920 PF00005 ABC transporter IFY67_03921 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03922 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03923 PF01464 Transglycosylase SLT domain IFY67_03923 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_03924 PF00155 Aminotransferase class I and II IFY67_03924 PF00392 Bacterial regulatory proteins, gntR family IFY67_03925 PF00155 Aminotransferase class I and II IFY67_03926 PF00892 EamA-like transporter family IFY67_03927 PF07687 Peptidase dimerisation domain IFY67_03927 PF01546 Peptidase family M20/M25/M40 IFY67_03928 PF00005 ABC transporter IFY67_03928 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_03929 PF00005 ABC transporter IFY67_03929 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFY67_03930 PF12911 N-terminal TM domain of oligopeptide transport permease C IFY67_03930 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03931 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_03932 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_03933 PF04107 Glutamate-cysteine ligase family 2(GCS2) IFY67_03934 PF09992 Phosphodiester glycosidase IFY67_03935 PF00873 AcrB/AcrD/AcrF family IFY67_03936 PF00873 AcrB/AcrD/AcrF family IFY67_03937 PF13533 Biotin-lipoyl like IFY67_03938 PF00690 Cation transporter/ATPase, N-terminus IFY67_03938 PF00689 Cation transporting ATPase, C-terminus IFY67_03940 PF06643 Protein of unknown function (DUF1158) IFY67_03941 PF12833 Helix-turn-helix domain IFY67_03942 PF12706 Beta-lactamase superfamily domain IFY67_03944 PF04237 YjbR IFY67_03945 PF00881 Nitroreductase family IFY67_03947 PF03830 PTS system sorbose subfamily IIB component IFY67_03949 PF03613 PTS system mannose/fructose/sorbose family IID component IFY67_03950 PF01380 SIS domain IFY67_03951 PF01380 SIS domain IFY67_03952 PF03610 PTS system fructose IIA component IFY67_03952 PF00158 Sigma-54 interaction domain IFY67_03952 PF00874 PRD domain IFY67_03955 PF07690 Major Facilitator Superfamily IFY67_03956 PF00924 Mechanosensitive ion channel IFY67_03957 PF00356 Bacterial regulatory proteins, lacI family IFY67_03959 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_03959 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_03961 PF03825 Nucleoside H+ symporter IFY67_03962 PF00324 Amino acid permease IFY67_03963 PF00593 TonB dependent receptor IFY67_03963 PF07715 TonB-dependent Receptor Plug Domain IFY67_03965 PF00171 Aldehyde dehydrogenase family IFY67_03966 PF01266 FAD dependent oxidoreductase IFY67_03968 PF13520 Amino acid permease IFY67_03971 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system IFY67_03972 PF00850 Histone deacetylase domain IFY67_03974 PF00196 Bacterial regulatory proteins, luxR family IFY67_03975 PF04055 Radical SAM superfamily IFY67_03976 PF04055 Radical SAM superfamily IFY67_03977 PF00884 Sulfatase IFY67_03979 PF10703 MoaF N-terminal domain IFY67_03979 PF17409 MoaF C-terminal domain IFY67_03980 PF00248 Aldo/keto reductase family IFY67_03981 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_03982 PF01546 Peptidase family M20/M25/M40 IFY67_03982 PF07687 Peptidase dimerisation domain IFY67_03986 PF01032 FecCD transport family IFY67_03987 PF00005 ABC transporter IFY67_03988 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_03988 PF00529 HlyD membrane-fusion protein of T1SS IFY67_03989 PF11742 Protein of unknown function (DUF3302) IFY67_03991 PF00294 pfkB family carbohydrate kinase IFY67_03992 PF11471 Maltoporin periplasmic N-terminal extension IFY67_03992 PF02264 LamB porin IFY67_03993 PF00367 phosphotransferase system, EIIB IFY67_03993 PF02378 Phosphotransferase system, EIIC IFY67_03994 PF08244 Glycosyl hydrolases family 32 C terminal IFY67_03994 PF00251 Glycosyl hydrolases family 32 N-terminal domain IFY67_03995 PF00356 Bacterial regulatory proteins, lacI family IFY67_03995 PF13407 Periplasmic binding protein domain IFY67_03997 PF02653 Branched-chain amino acid transport system / permease component IFY67_03998 PF00005 ABC transporter IFY67_03999 PF00005 ABC transporter IFY67_04000 PF13407 Periplasmic binding protein domain IFY67_04001 PF00356 Bacterial regulatory proteins, lacI family IFY67_04002 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_04002 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_04003 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_04003 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_04004 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_04004 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_04005 PF01261 Xylose isomerase-like TIM barrel IFY67_04007 PF00152 tRNA synthetases class II (D, K and N) IFY67_04007 PF01336 OB-fold nucleic acid binding domain IFY67_04008 PF00854 POT family IFY67_04009 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IFY67_04009 PF01276 Orn/Lys/Arg decarboxylase, major domain IFY67_04009 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IFY67_04010 PF13520 Amino acid permease IFY67_04011 PF18500 CadC C-terminal domain 1 IFY67_04011 PF00486 Transcriptional regulatory protein, C terminal IFY67_04013 PF03279 Bacterial lipid A biosynthesis acyltransferase IFY67_04016 PF13953 PapC C-terminal domain IFY67_04016 PF00577 Outer membrane usher protein IFY67_04016 PF13954 PapC N-terminal domain IFY67_04018 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_04018 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_04019 PF16970 Type-1 fimbrial protein, A IFY67_04022 PF00285 Citrate synthase, C-terminal domain IFY67_04024 PF00576 HIUase/Transthyretin family IFY67_04025 PF00717 Peptidase S24-like IFY67_04027 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IFY67_04058 PF00959 Phage lysozyme IFY67_04059 PF04971 Bacteriophage P21 holin S IFY67_04073 PF03796 DnaB-like helicase C terminal domain IFY67_04073 PF00772 DnaB-like helicase N terminal domain IFY67_04077 PF00717 Peptidase S24-like IFY67_04077 PF01381 Helix-turn-helix IFY67_04085 PF00589 Phage integrase family IFY67_04087 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IFY67_04087 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IFY67_04089 PF09190 DALR domain IFY67_04089 PF01406 tRNA synthetases class I (C) catalytic domain IFY67_04090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IFY67_04091 PF00149 Calcineurin-like phosphoesterase IFY67_04093 PF00731 AIR carboxylase IFY67_04094 PF02222 ATP-grasp domain IFY67_04094 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IFY67_04096 PF00267 Gram-negative porin IFY67_04099 PF13472 GDSL-like Lipase/Acylhydrolase family IFY67_04100 PF00106 short chain dehydrogenase IFY67_04101 PF00085 Thioredoxin IFY67_04102 PF03649 Uncharacterised protein family (UPF0014) IFY67_04103 PF00005 ABC transporter IFY67_04104 PF16200 C-terminal region of band_7 IFY67_04104 PF01145 SPFH domain / Band 7 family IFY67_04105 PF01957 NfeD-like C-terminal, partner-binding IFY67_04106 PF13411 MerR HTH family regulatory protein IFY67_04107 PF00403 Heavy-metal-associated domain IFY67_04108 PF01963 TraB family IFY67_04109 PF01963 TraB family IFY67_04110 PF04073 Aminoacyl-tRNA editing domain IFY67_04111 PF02872 5'-nucleotidase, C-terminal domain IFY67_04111 PF00149 Calcineurin-like phosphoesterase IFY67_04112 PF07690 Major Facilitator Superfamily IFY67_04113 PF02254 TrkA-N domain IFY67_04113 PF00999 Sodium/hydrogen exchanger family IFY67_04114 PF00294 pfkB family carbohydrate kinase IFY67_04115 PF00762 Ferrochelatase IFY67_04116 PF05191 Adenylate kinase, active site lid IFY67_04117 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_04117 PF00183 Hsp90 protein IFY67_04118 PF13662 Toprim domain IFY67_04118 PF02132 RecR protein IFY67_04119 PF02575 YbaB/EbfC DNA-binding family IFY67_04120 PF12169 DNA polymerase III subunits gamma and tau domain III IFY67_04120 PF12170 DNA polymerase III tau subunit V interacting with alpha IFY67_04120 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IFY67_04121 PF00156 Phosphoribosyl transferase domain IFY67_04122 PF04304 Protein of unknown function (DUF454) IFY67_04123 PF07445 Primosomal replication protein priC IFY67_04124 PF10689 Protein of unknown function (DUF2496) IFY67_04125 PF04754 Putative transposase, YhgA-like IFY67_04126 PF12794 Mechanosensitive ion channel inner membrane domain 1 IFY67_04126 PF12795 Mechanosensitive ion channel porin domain IFY67_04126 PF00924 Mechanosensitive ion channel IFY67_04127 PF08361 MAATS-type transcriptional repressor, C-terminal region IFY67_04127 PF00440 Bacterial regulatory proteins, tetR family IFY67_04128 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_04128 PF00529 HlyD membrane-fusion protein of T1SS IFY67_04129 PF00873 AcrB/AcrD/AcrF family IFY67_04130 PF10757 Biofilm formation regulator YbaJ IFY67_04131 PF05321 Haemolysin expression modulating protein IFY67_04132 PF14602 Hexapeptide repeat of succinyl-transferase IFY67_04132 PF12464 Maltose acetyltransferase IFY67_04133 PF10777 Inner membrane protein YlaC IFY67_04134 PF00155 Aminotransferase class I and II IFY67_04134 PF00392 Bacterial regulatory proteins, gntR family IFY67_04136 PF00444 Ribosomal protein L36 IFY67_04137 PF01197 Ribosomal protein L31 IFY67_04138 PF00356 Bacterial regulatory proteins, lacI family IFY67_04139 PF02264 LamB porin IFY67_04140 PF00367 phosphotransferase system, EIIB IFY67_04140 PF02378 Phosphotransferase system, EIIC IFY67_04141 PF02449 Beta-galactosidase IFY67_04141 PF08532 Beta-galactosidase trimerisation domain IFY67_04141 PF08533 Beta-galactosidase C-terminal domain IFY67_04142 PF07745 Glycosyl hydrolase family 53 IFY67_04143 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04144 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04145 PF13416 Bacterial extracellular solute-binding protein IFY67_04146 PF17912 MalK OB fold domain IFY67_04146 PF00005 ABC transporter IFY67_04147 PF12792 CSS motif domain associated with EAL IFY67_04147 PF00563 EAL domain IFY67_04148 PF02583 Metal-sensitive transcriptional repressor IFY67_04149 PF03824 High-affinity nickel-transport protein IFY67_04156 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IFY67_04157 PF09619 Type III secretion system lipoprotein chaperone (YscW) IFY67_04159 PF00909 Ammonium Transporter Family IFY67_04160 PF00543 Nitrogen regulatory protein P-II IFY67_04161 PF00664 ABC transporter transmembrane region IFY67_04161 PF00005 ABC transporter IFY67_04162 PF00005 ABC transporter IFY67_04162 PF00664 ABC transporter transmembrane region IFY67_04163 PF01037 Lrp/AsnC ligand binding domain IFY67_04163 PF13404 AsnC-type helix-turn-helix domain IFY67_04164 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_04166 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_04166 PF12793 Sugar transport-related sRNA regulator N-term IFY67_04167 PF06508 Queuosine biosynthesis protein QueC IFY67_04170 PF13145 PPIC-type PPIASE domain IFY67_04171 PF00216 Bacterial DNA-binding protein IFY67_04172 PF02190 ATP-dependent protease La (LON) substrate-binding domain IFY67_04172 PF05362 Lon protease (S16) C-terminal proteolytic domain IFY67_04172 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_04173 PF07724 AAA domain (Cdc48 subfamily) IFY67_04173 PF10431 C-terminal, D2-small domain, of ClpB protein IFY67_04173 PF06689 ClpX C4-type zinc finger IFY67_04174 PF00574 Clp protease IFY67_04175 PF05697 Bacterial trigger factor protein (TF) IFY67_04175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFY67_04175 PF05698 Bacterial trigger factor protein (TF) C-terminus IFY67_04176 PF01722 BolA-like protein IFY67_04177 PF08139 Prokaryotic membrane lipoprotein lipid attachment site IFY67_04177 PF03923 Uncharacterized lipoprotein IFY67_04178 PF07690 Major Facilitator Superfamily IFY67_04179 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IFY67_04179 PF06481 COX Aromatic Rich Motif IFY67_04180 PF00115 Cytochrome C and Quinol oxidase polypeptide I IFY67_04181 PF00510 Cytochrome c oxidase subunit III IFY67_04182 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IFY67_04183 PF01040 UbiA prenyltransferase family IFY67_04185 PF01614 Bacterial transcriptional regulator IFY67_04185 PF09339 IclR helix-turn-helix domain IFY67_04186 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IFY67_04186 PF08501 Shikimate dehydrogenase substrate binding domain IFY67_04186 PF01488 Shikimate / quinate 5-dehydrogenase IFY67_04187 PF00890 FAD binding domain IFY67_04189 PF00890 FAD binding domain IFY67_04191 PF07690 Major Facilitator Superfamily IFY67_04192 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_04192 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_04193 PF07690 Major Facilitator Superfamily IFY67_04194 PF04461 Protein of unknown function (DUF520) IFY67_04195 PF08546 Ketopantoate reductase PanE/ApbA C terminal IFY67_04195 PF02558 Ketopantoate reductase PanE/ApbA IFY67_04196 PF01965 DJ-1/PfpI family IFY67_04197 PF01965 DJ-1/PfpI family IFY67_04199 PF02926 THUMP domain IFY67_04199 PF02568 Thiamine biosynthesis protein (ThiI) IFY67_04200 PF02609 Exonuclease VII small subunit IFY67_04201 PF00348 Polyprenyl synthetase IFY67_04202 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IFY67_04202 PF02780 Transketolase, C-terminal domain IFY67_04202 PF02779 Transketolase, pyrimidine binding domain IFY67_04203 PF02780 Transketolase, C-terminal domain IFY67_04203 PF02779 Transketolase, pyrimidine binding domain IFY67_04203 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IFY67_04204 PF00248 Aldo/keto reductase family IFY67_04205 PF04608 Phosphatidylglycerophosphatase A IFY67_04206 PF02769 AIR synthase related protein, C-terminal domain IFY67_04206 PF00586 AIR synthase related protein, N-terminal domain IFY67_04207 PF01029 NusB family IFY67_04208 PF00885 6,7-dimethyl-8-ribityllumazine synthase IFY67_04209 PF01872 RibD C-terminal domain IFY67_04209 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IFY67_04210 PF03477 ATP cone domain IFY67_04211 PF11622 Protein of unknown function (DUF3251) IFY67_04212 PF03502 Nucleoside-specific channel-forming protein, Tsx IFY67_04215 PF07549 SecD/SecF GG Motif IFY67_04215 PF02355 Protein export membrane protein IFY67_04216 PF02355 Protein export membrane protein IFY67_04216 PF07549 SecD/SecF GG Motif IFY67_04216 PF13721 SecD export protein N-terminal TM region IFY67_04217 PF02699 Preprotein translocase subunit IFY67_04218 PF01702 Queuine tRNA-ribosyltransferase IFY67_04219 PF02547 Queuosine biosynthesis protein IFY67_04220 PF04336 Acyl carrier protein phosphodiesterase IFY67_04221 PF00578 AhpC/TSA family IFY67_04221 PF10417 C-terminal domain of 1-Cys peroxiredoxin IFY67_04222 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_04224 PF03611 PTS system sugar-specific permease component IFY67_04225 PF00294 pfkB family carbohydrate kinase IFY67_04226 PF01116 Fructose-bisphosphate aldolase class-II IFY67_04227 PF01979 Amidohydrolase family IFY67_04229 PF00857 Isochorismatase family IFY67_04231 PF03466 LysR substrate binding domain IFY67_04231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04232 PF00128 Alpha amylase, catalytic domain IFY67_04232 PF02903 Alpha amylase, N-terminal ig-like domain IFY67_04233 PF00324 Amino acid permease IFY67_04234 PF05525 Branched-chain amino acid transport protein IFY67_04235 PF00989 PAS fold IFY67_04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_04235 PF00512 His Kinase A (phospho-acceptor) domain IFY67_04235 PF11808 Phosphate regulon sensor protein PhoR IFY67_04236 PF00072 Response regulator receiver domain IFY67_04236 PF00486 Transcriptional regulatory protein, C terminal IFY67_04237 PF12320 Type 5 capsule protein repressor C-terminal domain IFY67_04237 PF00149 Calcineurin-like phosphoesterase IFY67_04238 PF00149 Calcineurin-like phosphoesterase IFY67_04238 PF12320 Type 5 capsule protein repressor C-terminal domain IFY67_04239 PF13476 AAA domain IFY67_04240 PF00480 ROK family IFY67_04241 PF04381 Putative exonuclease, RdgC IFY67_04242 PF06865 Pyrimidine/purine nucleoside phosphorylase IFY67_04243 PF07302 AroM protein IFY67_04244 PF16362 YaiA protein IFY67_04245 PF01202 Shikimate kinase IFY67_04246 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) IFY67_04247 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IFY67_04248 PF03807 NADP oxidoreductase coenzyme F420-dependent IFY67_04248 PF14748 Pyrroline-5-carboxylate reductase dimerisation IFY67_04249 PF07769 psiF repeat IFY67_04250 PF00245 Alkaline phosphatase IFY67_04251 PF00245 Alkaline phosphatase IFY67_04252 PF10796 Sigma-S stabilisation anti-adaptor protein IFY67_04253 PF07690 Major Facilitator Superfamily IFY67_04255 PF01820 D-ala D-ala ligase N-terminus IFY67_04255 PF07478 D-ala D-ala ligase C-terminus IFY67_04256 PF10953 Protein of unknown function (DUF2754) IFY67_04257 PF10954 Protein of unknown function (DUF2755) IFY67_04258 PF07759 Protein of unknown function (DUF1615) IFY67_04259 PF05992 SbmA/BacA-like family IFY67_04260 PF00857 Isochorismatase family IFY67_04261 PF00144 Beta-lactamase IFY67_04262 PF00490 Delta-aminolevulinic acid dehydratase IFY67_04265 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IFY67_04266 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04267 PF00005 ABC transporter IFY67_04268 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IFY67_04269 PF02574 Homocysteine S-methyltransferase IFY67_04270 PF00324 Amino acid permease IFY67_04271 PF00324 Amino acid permease IFY67_04272 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IFY67_04273 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IFY67_04274 PF13458 Periplasmic binding protein IFY67_04275 PF02653 Branched-chain amino acid transport system / permease component IFY67_04276 PF11862 Domain of unknown function (DUF3382) IFY67_04276 PF02653 Branched-chain amino acid transport system / permease component IFY67_04277 PF12399 Branched-chain amino acid ATP-binding cassette transporter IFY67_04277 PF00005 ABC transporter IFY67_04278 PF00005 ABC transporter IFY67_04280 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_04281 PF00005 ABC transporter IFY67_04282 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04283 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04286 PF15976 CS1-pili formation C-terminal IFY67_04286 PF16967 E-set like domain IFY67_04287 PF15976 CS1-pili formation C-terminal IFY67_04287 PF16967 E-set like domain IFY67_04288 PF18649 EcpB C-terminal domain IFY67_04289 PF16449 Fimbrillin MatB IFY67_04290 PF00196 Bacterial regulatory proteins, luxR family IFY67_04291 PF00005 ABC transporter IFY67_04293 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04294 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04297 PF00877 NlpC/P60 family IFY67_04298 PF00267 Gram-negative porin IFY67_04299 PF01472 PUA domain IFY67_04299 PF00696 Amino acid kinase family IFY67_04300 PF00171 Aldehyde dehydrogenase family IFY67_04302 PF00005 ABC transporter IFY67_04303 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04304 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04305 PF00106 short chain dehydrogenase IFY67_04307 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04307 PF03466 LysR substrate binding domain IFY67_04308 PF00155 Aminotransferase class I and II IFY67_04309 PF03746 LamB/YcsF family IFY67_04310 PF02626 Carboxyltransferase domain, subdomain A and B IFY67_04313 PF00892 EamA-like transporter family IFY67_04314 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IFY67_04314 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IFY67_04315 PF02785 Biotin carboxylase C-terminal domain IFY67_04315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IFY67_04315 PF00289 Biotin carboxylase, N-terminal domain IFY67_04316 PF00364 Biotin-requiring enzyme IFY67_04317 PF13191 AAA ATPase domain IFY67_04317 PF00069 Protein kinase domain IFY67_04318 PF00676 Dehydrogenase E1 component IFY67_04319 PF02779 Transketolase, pyrimidine binding domain IFY67_04319 PF02780 Transketolase, C-terminal domain IFY67_04320 PF02817 e3 binding domain IFY67_04320 PF00364 Biotin-requiring enzyme IFY67_04320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IFY67_04321 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_04321 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFY67_04323 PF13847 Methyltransferase domain IFY67_04324 PF09857 Putative toxin of bacterial toxin-antitoxin pair IFY67_04325 PF08943 CsiD IFY67_04326 PF01266 FAD dependent oxidoreductase IFY67_04327 PF00171 Aldehyde dehydrogenase family IFY67_04328 PF00202 Aminotransferase class-III IFY67_04329 PF00324 Amino acid permease IFY67_04330 PF00324 Amino acid permease IFY67_04331 PF07729 FCD domain IFY67_04331 PF00392 Bacterial regulatory proteins, gntR family IFY67_04332 PF07417 Sigma factor-binding transcriptional regulator Crl IFY67_04333 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) IFY67_04334 PF00156 Phosphoribosyl transferase domain IFY67_04335 PF07687 Peptidase dimerisation domain IFY67_04335 PF01546 Peptidase family M20/M25/M40 IFY67_04336 PF13673 Acetyltransferase (GNAT) domain IFY67_04337 PF11799 impB/mucB/samB family C-terminal domain IFY67_04337 PF11798 IMS family HHH motif IFY67_04337 PF00817 impB/mucB/samB family IFY67_04338 PF03009 Glycerophosphoryl diester phosphodiesterase family IFY67_04340 PF04400 (Na+)-NQR maturation NqrM IFY67_04341 PF00175 Oxidoreductase NAD-binding domain IFY67_04341 PF00970 Oxidoreductase FAD-binding domain IFY67_04341 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_04342 PF00111 2Fe-2S iron-sulfur cluster binding domain IFY67_04342 PF00970 Oxidoreductase FAD-binding domain IFY67_04342 PF00175 Oxidoreductase NAD-binding domain IFY67_04343 PF02508 Rnf-Nqr subunit, membrane protein IFY67_04344 PF02508 Rnf-Nqr subunit, membrane protein IFY67_04345 PF04205 FMN-binding domain IFY67_04346 PF03116 NQR2, RnfD, RnfE family IFY67_04347 PF11973 NQRA C-terminal domain IFY67_04347 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IFY67_04348 PF03734 L,D-transpeptidase catalytic domain IFY67_04349 PF13230 Glutamine amidotransferases class-II IFY67_04350 PF13580 SIS domain IFY67_04351 PF09317 Domain of unknown function (DUF1974) IFY67_04351 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IFY67_04351 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IFY67_04351 PF02770 Acyl-CoA dehydrogenase, middle domain IFY67_04352 PF09317 Domain of unknown function (DUF1974) IFY67_04352 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IFY67_04352 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IFY67_04352 PF02770 Acyl-CoA dehydrogenase, middle domain IFY67_04353 PF00795 Carbon-nitrogen hydrolase IFY67_04354 PF01810 LysE type translocator IFY67_04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04355 PF03466 LysR substrate binding domain IFY67_04357 PF00929 Exonuclease IFY67_04358 PF00075 RNase H IFY67_04359 PF08241 Methyltransferase domain IFY67_04360 PF16123 Hydroxyacylglutathione hydrolase C-terminus IFY67_04360 PF00753 Metallo-beta-lactamase superfamily IFY67_04361 PF01464 Transglycosylase SLT domain IFY67_04361 PF01476 LysM domain IFY67_04362 PF08241 Methyltransferase domain IFY67_04363 PF03372 Endonuclease/Exonuclease/phosphatase family IFY67_04364 PF07690 Major Facilitator Superfamily IFY67_04365 PF03466 LysR substrate binding domain IFY67_04365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04366 PF00248 Aldo/keto reductase family IFY67_04374 PF09383 NIL domain IFY67_04374 PF00005 ABC transporter IFY67_04375 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04376 PF03180 NLPA lipoprotein IFY67_04377 PF16358 RcsF lipoprotein IFY67_04378 PF01980 tRNA-methyltransferase O IFY67_04378 PF18389 TrmO C-terminal domain IFY67_04379 PF03129 Anticodon binding domain IFY67_04379 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFY67_04379 PF04073 Aminoacyl-tRNA editing domain IFY67_04380 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family IFY67_04381 PF17185 NlpE C-terminal OB domain IFY67_04381 PF04170 NlpE N-terminal domain IFY67_04382 PF00472 RF-1 domain IFY67_04383 PF07152 YaeQ protein IFY67_04384 PF06786 Uncharacterised protein family (UPF0253) IFY67_04385 PF07073 Modulator of Rho-dependent transcription termination (ROF) IFY67_04386 PF09179 TilS substrate binding domain IFY67_04386 PF01171 PP-loop family IFY67_04386 PF11734 TilS substrate C-terminal domain IFY67_04387 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IFY67_04388 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IFY67_04388 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IFY67_04388 PF01276 Orn/Lys/Arg decarboxylase, major domain IFY67_04389 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IFY67_04390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IFY67_04390 PF07733 Bacterial DNA polymerase III alpha NTPase domain IFY67_04390 PF02811 PHP domain IFY67_04390 PF01336 OB-fold nucleic acid binding domain IFY67_04390 PF14579 Helix-hairpin-helix motif IFY67_04391 PF01351 Ribonuclease HII IFY67_04392 PF02684 Lipid-A-disaccharide synthetase IFY67_04393 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_04393 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IFY67_04394 PF07977 FabA-like domain IFY67_04395 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IFY67_04395 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_04396 PF03938 Outer membrane protein (OmpH-like) IFY67_04397 PF01103 Surface antigen IFY67_04397 PF07244 Surface antigen variable number repeat IFY67_04398 PF17820 PDZ domain IFY67_04398 PF02163 Peptidase family M50 IFY67_04400 PF01255 Putative undecaprenyl diphosphate synthase IFY67_04401 PF13288 DXP reductoisomerase C-terminal domain IFY67_04401 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IFY67_04401 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IFY67_04402 PF01765 Ribosome recycling factor IFY67_04403 PF00696 Amino acid kinase family IFY67_04404 PF00889 Elongation factor TS IFY67_04405 PF00318 Ribosomal protein S2 IFY67_04406 PF00557 Metallopeptidase family M24 IFY67_04407 PF01842 ACT domain IFY67_04407 PF08335 GlnD PII-uridylyltransferase IFY67_04407 PF01966 HD domain IFY67_04407 PF01909 Nucleotidyltransferase domain IFY67_04408 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_04408 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IFY67_04408 PF14602 Hexapeptide repeat of succinyl-transferase IFY67_04409 PF11944 Protein of unknown function (DUF3461) IFY67_04410 PF05651 Putative sugar diacid recognition IFY67_04410 PF13556 PucR C-terminal helix-turn-helix domain IFY67_04410 PF17853 GGDEF-like domain IFY67_04411 PF00595 PDZ domain IFY67_04412 PF01966 HD domain IFY67_04412 PF13286 Phosphohydrolase-associated domain IFY67_04413 PF01048 Phosphorylase superfamily IFY67_04414 PF01497 Periplasmic binding protein IFY67_04415 PF03458 UPF0126 domain IFY67_04416 PF01521 Iron-sulphur cluster biosynthesis IFY67_04417 PF00654 Voltage gated chloride channel IFY67_04418 PF00654 Voltage gated chloride channel IFY67_04419 PF00202 Aminotransferase class-III IFY67_04420 PF01032 FecCD transport family IFY67_04421 PF01497 Periplasmic binding protein IFY67_04422 PF00005 ABC transporter IFY67_04423 PF00593 TonB dependent receptor IFY67_04423 PF07715 TonB-dependent Receptor Plug Domain IFY67_04424 PF00912 Transglycosylase IFY67_04424 PF00905 Penicillin binding protein transpeptidase domain IFY67_04424 PF14814 Bifunctional transglycosylase second domain IFY67_04424 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal IFY67_04425 PF16537 Type II secretion system protein B IFY67_04426 PF18494 Pullulanase Ins domain IFY67_04426 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IFY67_04426 PF11852 Domain of unknown function (DUF3372) IFY67_04426 PF03714 Bacterial pullanase-associated domain IFY67_04426 PF17967 Pullulanase N2 domain IFY67_04427 PF11356 Type II secretion system protein C IFY67_04428 PF00263 Bacterial type II and III secretion system protein IFY67_04428 PF03958 Bacterial type II/III secretion system short domain IFY67_04429 PF00437 Type II/IV secretion system protein IFY67_04430 PF00482 Type II secretion system (T2SS), protein F IFY67_04431 PF07963 Prokaryotic N-terminal methylation motif IFY67_04431 PF08334 Type II secretion system (T2SS), protein G IFY67_04432 PF07963 Prokaryotic N-terminal methylation motif IFY67_04433 PF02501 Type II secretion system (T2SS), protein I IFY67_04433 PF07963 Prokaryotic N-terminal methylation motif IFY67_04434 PF11612 Type II secretion system (T2SS), protein J IFY67_04434 PF07963 Prokaryotic N-terminal methylation motif IFY67_04435 PF03934 Type II secretion system (T2SS), protein K IFY67_04436 PF05134 Type II secretion system (T2SS), protein L IFY67_04436 PF12693 GspL periplasmic domain IFY67_04437 PF04612 Type II secretion system (T2SS), protein M IFY67_04438 PF01203 Type II secretion system (T2SS), protein N IFY67_04439 PF01478 Type IV leader peptidase family IFY67_04439 PF06750 Bacterial Peptidase A24 N-terminal domain IFY67_04440 PF00270 DEAD/DEAH box helicase IFY67_04440 PF04408 Helicase associated domain (HA2) IFY67_04440 PF00271 Helicase conserved C-terminal domain IFY67_04440 PF08482 ATP-dependent helicase C-terminal IFY67_04441 PF02834 LigT like Phosphoesterase IFY67_04442 PF03749 Sugar fermentation stimulation protein RE domain IFY67_04442 PF17746 SfsA N-terminal OB domain IFY67_04443 PF01258 Prokaryotic dksA/traR C4-type zinc finger IFY67_04444 PF00749 tRNA synthetases class I (E and Q), catalytic domain IFY67_04445 PF01743 Poly A polymerase head domain IFY67_04445 PF12627 Probable RNA and SrmB- binding site of polymerase A IFY67_04445 PF12626 Polymerase A arginine-rich C-terminus IFY67_04446 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IFY67_04447 PF02548 Ketopantoate hydroxymethyltransferase IFY67_04448 PF02569 Pantoate-beta-alanine ligase IFY67_04449 PF02261 Aspartate decarboxylase IFY67_04450 PF01522 Polysaccharide deacetylase IFY67_04451 PF03610 PTS system fructose IIA component IFY67_04452 PF01061 ABC-2 type transporter IFY67_04453 PF00005 ABC transporter IFY67_04454 PF00484 Carbonic anhydrase IFY67_04455 PF00156 Phosphoribosyl transferase domain IFY67_04456 PF01011 PQQ enzyme repeat IFY67_04457 PF07732 Multicopper oxidase IFY67_04457 PF07731 Multicopper oxidase IFY67_04457 PF00394 Multicopper oxidase IFY67_04458 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) IFY67_04461 PF17284 Spermidine synthase tetramerisation domain IFY67_04462 PF02675 S-adenosylmethionine decarboxylase IFY67_04463 PF06062 Uncharacterised protein family (UPF0231) IFY67_04464 PF06434 Aconitate hydratase 2 N-terminus IFY67_04464 PF00330 Aconitase family (aconitate hydratase) IFY67_04464 PF11791 Aconitate B N-terminal domain IFY67_04465 PF06434 Aconitate hydratase 2 N-terminus IFY67_04465 PF11791 Aconitate B N-terminal domain IFY67_04465 PF00330 Aconitase family (aconitate hydratase) IFY67_04466 PF11737 Protein of unknown function (DUF3300) IFY67_04469 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFY67_04469 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_04470 PF00364 Biotin-requiring enzyme IFY67_04470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IFY67_04470 PF02817 e3 binding domain IFY67_04471 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IFY67_04471 PF00364 Biotin-requiring enzyme IFY67_04471 PF02817 e3 binding domain IFY67_04472 PF17831 Pyruvate dehydrogenase E1 component middle domain IFY67_04472 PF00456 Transketolase, thiamine diphosphate binding domain IFY67_04473 PF07729 FCD domain IFY67_04473 PF00392 Bacterial regulatory proteins, gntR family IFY67_04474 PF00324 Amino acid permease IFY67_04476 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain IFY67_04476 PF04616 Glycosyl hydrolases family 43 IFY67_04477 PF17113 Regulatory signalling modulator protein AmpE IFY67_04478 PF01510 N-acetylmuramoyl-L-alanine amidase IFY67_04479 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IFY67_04479 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IFY67_04480 PF07963 Prokaryotic N-terminal methylation motif IFY67_04481 PF00437 Type II/IV secretion system protein IFY67_04481 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IFY67_04482 PF00482 Type II secretion system (T2SS), protein F IFY67_04483 PF00478 IMP dehydrogenase / GMP reductase domain IFY67_04484 PF01121 Dephospho-CoA kinase IFY67_04485 PF07072 Cell division protein IFY67_04486 PF03884 DNA gyrase inhibitor YacG IFY67_04487 PF00293 NUDIX domain IFY67_04488 PF07517 SecA DEAD-like domain IFY67_04488 PF07516 SecA Wing and Scaffold domain IFY67_04488 PF01043 SecA preprotein cross-linking domain IFY67_04488 PF02810 SEC-C motif IFY67_04489 PF06558 Secretion monitor precursor protein (SecM) IFY67_04490 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IFY67_04491 PF12327 FtsZ family, C-terminal domain IFY67_04491 PF00091 Tubulin/FtsZ family, GTPase domain IFY67_04492 PF02491 SHS2 domain inserted in FTSA IFY67_04493 PF03799 Cell division protein FtsQ IFY67_04493 PF08478 POTRA domain, FtsQ-type IFY67_04494 PF01820 D-ala D-ala ligase N-terminus IFY67_04494 PF07478 D-ala D-ala ligase C-terminus IFY67_04495 PF08245 Mur ligase middle domain IFY67_04495 PF01225 Mur ligase family, catalytic domain IFY67_04495 PF02875 Mur ligase family, glutamate ligase domain IFY67_04496 PF03033 Glycosyltransferase family 28 N-terminal domain IFY67_04496 PF04101 Glycosyltransferase family 28 C-terminal domain IFY67_04497 PF01098 Cell cycle protein IFY67_04498 PF08245 Mur ligase middle domain IFY67_04498 PF02875 Mur ligase family, glutamate ligase domain IFY67_04499 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IFY67_04499 PF00953 Glycosyl transferase family 4 IFY67_04500 PF01225 Mur ligase family, catalytic domain IFY67_04500 PF02875 Mur ligase family, glutamate ligase domain IFY67_04500 PF08245 Mur ligase middle domain IFY67_04501 PF02875 Mur ligase family, glutamate ligase domain IFY67_04501 PF08245 Mur ligase middle domain IFY67_04501 PF01225 Mur ligase family, catalytic domain IFY67_04502 PF00905 Penicillin binding protein transpeptidase domain IFY67_04502 PF03717 Penicillin-binding Protein dimerisation domain IFY67_04503 PF04999 Cell division protein FtsL IFY67_04504 PF01795 MraW methylase family IFY67_04505 PF02381 MraZ protein, putative antitoxin-like IFY67_04506 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IFY67_04506 PF00356 Bacterial regulatory proteins, lacI family IFY67_04507 PF10369 Small subunit of acetolactate synthase IFY67_04508 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_04508 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_04508 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_04509 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04509 PF03466 LysR substrate binding domain IFY67_04510 PF00682 HMGL-like IFY67_04510 PF08502 LeuA allosteric (dimerisation) domain IFY67_04511 PF00180 Isocitrate/isopropylmalate dehydrogenase IFY67_04512 PF00330 Aconitase family (aconitate hydratase) IFY67_04513 PF00694 Aconitase C-terminal domain IFY67_04514 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IFY67_04514 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_04515 PF08501 Shikimate dehydrogenase substrate binding domain IFY67_04515 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IFY67_04516 PF07690 Major Facilitator Superfamily IFY67_04517 PF01487 Type I 3-dehydroquinase IFY67_04518 PF03466 LysR substrate binding domain IFY67_04518 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04519 PF07690 Major Facilitator Superfamily IFY67_04520 PF07690 Major Facilitator Superfamily IFY67_04522 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFY67_04522 PF12793 Sugar transport-related sRNA regulator N-term IFY67_04524 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04525 PF00005 ABC transporter IFY67_04526 PF09335 SNARE associated Golgi protein IFY67_04527 PF12833 Helix-turn-helix domain IFY67_04527 PF02311 AraC-like ligand binding domain IFY67_04528 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_04529 PF02610 L-arabinose isomerase IFY67_04529 PF11762 L-arabinose isomerase C-terminal domain IFY67_04530 PF00596 Class II Aldolase and Adducin N-terminal domain IFY67_04531 PF00136 DNA polymerase family B IFY67_04531 PF03104 DNA polymerase family B, exonuclease domain IFY67_04532 PF18337 RapA N-terminal Tudor like domain IFY67_04532 PF00271 Helicase conserved C-terminal domain IFY67_04532 PF18339 RapA N-terminal Tudor like domain 1 IFY67_04532 PF12137 RNA polymerase recycling family C-terminal IFY67_04532 PF00176 SNF2 family N-terminal domain IFY67_04533 PF00849 RNA pseudouridylate synthase IFY67_04534 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase IFY67_04535 PF03390 2-hydroxycarboxylate transporter family IFY67_04536 PF17203 Single cache domain 3 IFY67_04536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_04537 PF00072 Response regulator receiver domain IFY67_04537 PF12431 Transcriptional regulator IFY67_04538 PF05099 Tellurite resistance protein TerB IFY67_04538 PF00226 DnaJ domain IFY67_04539 PF03968 OstA-like protein IFY67_04539 PF04453 LPS transport system D IFY67_04540 PF00639 PPIC-type PPIASE domain IFY67_04540 PF09312 SurA N-terminal domain IFY67_04541 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IFY67_04542 PF00398 Ribosomal RNA adenine dimethylase IFY67_04543 PF04379 ApaG domain IFY67_04544 PF00149 Calcineurin-like phosphoesterase IFY67_04545 PF00186 Dihydrofolate reductase IFY67_04546 PF02254 TrkA-N domain IFY67_04546 PF00999 Sodium/hydrogen exchanger family IFY67_04547 PF02525 Flavodoxin-like fold IFY67_04548 PF06004 Bacterial protein of unknown function (DUF903) IFY67_04549 PF02142 MGS-like domain IFY67_04549 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IFY67_04549 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IFY67_04550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IFY67_04550 PF02142 MGS-like domain IFY67_04550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IFY67_04551 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IFY67_04551 PF00117 Glutamine amidotransferase class-I IFY67_04552 PF01113 Dihydrodipicolinate reductase, N-terminus IFY67_04552 PF05173 Dihydrodipicolinate reductase, C-terminus IFY67_04553 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IFY67_04554 PF04223 Citrate lyase, alpha subunit (CitF) IFY67_04555 PF03328 HpcH/HpaI aldolase/citrate lyase family IFY67_04556 PF06857 Malonate decarboxylase delta subunit (MdcD) IFY67_04557 PF00583 Acetyltransferase (GNAT) family IFY67_04557 PF08218 Citrate lyase ligase C-terminal domain IFY67_04558 PF03390 2-hydroxycarboxylate transporter family IFY67_04559 PF04277 Oxaloacetate decarboxylase, gamma chain IFY67_04560 PF00364 Biotin-requiring enzyme IFY67_04560 PF02436 Conserved carboxylase domain IFY67_04560 PF00682 HMGL-like IFY67_04561 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IFY67_04562 PF17203 Single cache domain 3 IFY67_04562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_04563 PF00072 Response regulator receiver domain IFY67_04563 PF12431 Transcriptional regulator IFY67_04564 PF02272 DHHA1 domain IFY67_04564 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IFY67_04564 PF01411 tRNA synthetases class II (A) IFY67_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04565 PF03466 LysR substrate binding domain IFY67_04567 PF01156 Inosine-uridine preferring nucleoside hydrolase IFY67_04568 PF02401 LytB protein IFY67_04569 PF02401 LytB protein IFY67_04570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFY67_04571 PF01252 Signal peptidase (SPase) II IFY67_04572 PF08264 Anticodon-binding domain of tRNA IFY67_04572 PF06827 Zinc finger found in FPG and IleRS IFY67_04572 PF00133 tRNA synthetases class I (I, L, M and V) IFY67_04573 PF01687 Riboflavin kinase IFY67_04573 PF06574 FAD synthetase IFY67_04575 PF03466 LysR substrate binding domain IFY67_04575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04576 PF06965 Na+/H+ antiporter 1 IFY67_04577 PF00226 DnaJ domain IFY67_04577 PF00684 DnaJ central domain IFY67_04577 PF01556 DnaJ C terminal domain IFY67_04578 PF00012 Hsp70 protein IFY67_04579 PF10807 Protein of unknown function (DUF2541) IFY67_04580 PF13099 Domain of unknown function (DUF3944) IFY67_04580 PF03981 Ubiquinol-cytochrome C chaperone IFY67_04581 PF01184 GPR1/FUN34/yaaH family IFY67_04582 PF07690 Major Facilitator Superfamily IFY67_04583 PF00994 Probable molybdopterin binding domain IFY67_04584 PF00994 Probable molybdopterin binding domain IFY67_04585 PF00923 Transaldolase/Fructose-6-phosphate aldolase IFY67_04586 PF01235 Sodium:alanine symporter family IFY67_04587 PF03883 Peroxide stress protein YaaA IFY67_04589 PF14821 Threonine synthase N terminus IFY67_04589 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_04590 PF08544 GHMP kinases C terminal IFY67_04590 PF00288 GHMP kinases N terminal domain IFY67_04591 PF00696 Amino acid kinase family IFY67_04591 PF00742 Homoserine dehydrogenase IFY67_04591 PF13840 ACT domain IFY67_04591 PF01842 ACT domain IFY67_04591 PF03447 Homoserine dehydrogenase, NAD binding domain IFY67_04592 PF00588 SpoU rRNA Methylase family IFY67_04593 PF00486 Transcriptional regulatory protein, C terminal IFY67_04593 PF00072 Response regulator receiver domain IFY67_04594 PF06123 Inner membrane protein CreD IFY67_04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_04595 PF00512 His Kinase A (phospho-acceptor) domain IFY67_04595 PF00672 HAMP domain IFY67_04596 PF00486 Transcriptional regulatory protein, C terminal IFY67_04596 PF00072 Response regulator receiver domain IFY67_04597 PF05981 CreA protein IFY67_04598 PF12833 Helix-turn-helix domain IFY67_04598 PF06445 GyrI-like small molecule binding domain IFY67_04599 PF06445 GyrI-like small molecule binding domain IFY67_04599 PF12833 Helix-turn-helix domain IFY67_04600 PF00300 Histidine phosphatase superfamily (branch 1) IFY67_04601 PF01931 Protein of unknown function DUF84 IFY67_04602 PF01371 Trp repressor protein IFY67_04603 PF01464 Transglycosylase SLT domain IFY67_04603 PF14718 Soluble lytic murein transglycosylase L domain IFY67_04604 PF00005 ABC transporter IFY67_04604 PF12848 ABC transporter IFY67_04605 PF01381 Helix-turn-helix IFY67_04605 PF13521 AAA domain IFY67_04606 PF18073 Rubredoxin metal binding domain IFY67_04607 PF18429 Domain of unknown function (DUF5609) IFY67_04608 PF10144 Bacterial virulence factor haemolysin IFY67_04609 PF10437 Bacterial lipoate protein ligase C-terminus IFY67_04609 PF03099 Biotin/lipoate A/B protein ligase family IFY67_04610 PF01048 Phosphorylase superfamily IFY67_04611 PF01676 Metalloenzyme superfamily IFY67_04612 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IFY67_04612 PF00591 Glycosyl transferase family, a/b domain IFY67_04612 PF02885 Glycosyl transferase family, helical bundle domain IFY67_04613 PF01791 DeoC/LacD family aldolase IFY67_04614 PF07670 Nucleoside recognition IFY67_04614 PF07662 Na+ dependent nucleoside transporter C-terminus IFY67_04614 PF01773 Na+ dependent nucleoside transporter N-terminus IFY67_04615 PF01026 TatD related DNase IFY67_04616 PF01734 Patatin-like phospholipase IFY67_04617 PF07043 Protein of unknown function (DUF1328) IFY67_04618 PF04972 BON domain IFY67_04619 PF00009 Elongation factor Tu GTP binding domain IFY67_04619 PF16658 Class II release factor RF3, C-terminal domain IFY67_04619 PF03144 Elongation factor Tu domain 2 IFY67_04620 PF13419 Haloacid dehalogenase-like hydrolase IFY67_04621 PF00583 Acetyltransferase (GNAT) family IFY67_04622 PF03603 DNA polymerase III psi subunit IFY67_04623 PF08468 Methyltransferase small domain N-terminal IFY67_04623 PF05175 Methyltransferase small domain IFY67_04627 PF07256 Protein of unknown function (DUF1435) IFY67_04629 PF00990 Diguanylate cyclase, GGDEF domain IFY67_04630 PF06276 Ferric iron reductase FhuF-like transporter IFY67_04630 PF11575 FhuF 2Fe-2S C-terminal domain IFY67_04631 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_04631 PF02378 Phosphotransferase system, EIIC IFY67_04632 PF04073 Aminoacyl-tRNA editing domain IFY67_04633 PF00196 Bacterial regulatory proteins, luxR family IFY67_04634 PF00196 Bacterial regulatory proteins, luxR family IFY67_04636 PF01494 FAD binding domain IFY67_04637 PF01494 FAD binding domain IFY67_04638 PF06738 Putative threonine/serine exporter IFY67_04639 PF12821 Threonine/Serine exporter, ThrE IFY67_04640 PF17948 DnaT DNA-binding domain IFY67_04641 PF01695 IstB-like ATP binding protein IFY67_04642 PF10696 Protein of unknown function (DUF2501) IFY67_04643 PF00884 Sulfatase IFY67_04644 PF04754 Putative transposase, YhgA-like IFY67_04645 PF01380 SIS domain IFY67_04646 PF01380 SIS domain IFY67_04648 PF03613 PTS system mannose/fructose/sorbose family IID component IFY67_04649 PF03609 PTS system sorbose-specific iic component IFY67_04650 PF03830 PTS system sorbose subfamily IIB component IFY67_04651 PF03830 PTS system sorbose subfamily IIB component IFY67_04651 PF03610 PTS system fructose IIA component IFY67_04652 PF00874 PRD domain IFY67_04652 PF00158 Sigma-54 interaction domain IFY67_04652 PF03610 PTS system fructose IIA component IFY67_04653 PF00583 Acetyltransferase (GNAT) family IFY67_04653 PF00814 Glycoprotease family IFY67_04654 PF00583 Acetyltransferase (GNAT) family IFY67_04655 PF01380 SIS domain IFY67_04655 PF01418 Helix-turn-helix domain, rpiR family IFY67_04656 PF01081 KDPG and KHG aldolase IFY67_04657 PF05035 2-keto-3-deoxy-galactonokinase IFY67_04660 PF07969 Amidohydrolase family IFY67_04662 PF02615 Malate/L-lactate dehydrogenase IFY67_04663 PF13520 Amino acid permease IFY67_04664 PF00171 Aldehyde dehydrogenase family IFY67_04665 PF00701 Dihydrodipicolinate synthetase family IFY67_04667 PF05544 Proline racemase IFY67_04668 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IFY67_04668 PF01266 FAD dependent oxidoreductase IFY67_04670 PF04324 BFD-like [2Fe-2S] binding domain IFY67_04670 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_04671 PF01047 MarR family IFY67_04672 PF01557 Fumarylacetoacetate (FAA) hydrolase family IFY67_04673 PF01557 Fumarylacetoacetate (FAA) hydrolase family IFY67_04674 PF00171 Aldehyde dehydrogenase family IFY67_04675 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IFY67_04676 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase IFY67_04677 PF01557 Fumarylacetoacetate (FAA) hydrolase family IFY67_04678 PF03328 HpcH/HpaI aldolase/citrate lyase family IFY67_04679 PF07690 Major Facilitator Superfamily IFY67_04680 PF12833 Helix-turn-helix domain IFY67_04681 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal IFY67_04681 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal IFY67_04682 PF01613 Flavin reductase like domain IFY67_04685 PF02554 Carbon starvation protein CstA IFY67_04685 PF13722 5TM C-terminal transporter carbon starvation CstA IFY67_04686 PF04328 Selenoprotein, putative IFY67_04687 PF02492 CobW/HypB/UreG, nucleotide-binding domain IFY67_04687 PF07683 Cobalamin synthesis protein cobW C-terminal domain IFY67_04689 PF00171 Aldehyde dehydrogenase family IFY67_04690 PF04754 Putative transposase, YhgA-like IFY67_04691 PF12833 Helix-turn-helix domain IFY67_04691 PF02311 AraC-like ligand binding domain IFY67_04693 PF04286 Protein of unknown function (DUF445) IFY67_04694 PF07690 Major Facilitator Superfamily IFY67_04696 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component IFY67_04697 PF01869 BadF/BadG/BcrA/BcrD ATPase family IFY67_04698 PF11823 Protein of unknown function (DUF3343) IFY67_04700 PF00529 HlyD membrane-fusion protein of T1SS IFY67_04700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_04702 PF06568 Domain of unknown function (DUF1127) IFY67_04703 PF00155 Aminotransferase class I and II IFY67_04703 PF00392 Bacterial regulatory proteins, gntR family IFY67_04704 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IFY67_04705 PF03466 LysR substrate binding domain IFY67_04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04706 PF02525 Flavodoxin-like fold IFY67_04707 PF02653 Branched-chain amino acid transport system / permease component IFY67_04708 PF02653 Branched-chain amino acid transport system / permease component IFY67_04709 PF00005 ABC transporter IFY67_04710 PF13407 Periplasmic binding protein domain IFY67_04711 PF00579 tRNA synthetases class I (W and Y) IFY67_04712 PF13533 Biotin-lipoyl like IFY67_04713 PF00005 ABC transporter IFY67_04719 PF08007 Cupin superfamily protein IFY67_04722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_04722 PF00672 HAMP domain IFY67_04722 PF00512 His Kinase A (phospho-acceptor) domain IFY67_04723 PF00072 Response regulator receiver domain IFY67_04723 PF00486 Transcriptional regulatory protein, C terminal IFY67_04724 PF02321 Outer membrane efflux protein IFY67_04725 PF11604 Copper binding periplasmic protein CusF IFY67_04726 PF00529 HlyD membrane-fusion protein of T1SS IFY67_04726 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_04727 PF00873 AcrB/AcrD/AcrF family IFY67_04729 PF08212 Lipocalin-like domain IFY67_04730 PF13411 MerR HTH family regulatory protein IFY67_04731 PF12680 SnoaL-like domain IFY67_04732 PF00106 short chain dehydrogenase IFY67_04739 PF08349 Protein of unknown function (DUF1722) IFY67_04740 PF02264 LamB porin IFY67_04743 PF04616 Glycosyl hydrolases family 43 IFY67_04743 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IFY67_04750 PF13091 PLD-like domain IFY67_04750 PF13087 AAA domain IFY67_04751 PF02384 N-6 DNA Methylase IFY67_04754 PF07728 AAA domain (dynein-related subfamily) IFY67_04754 PF12102 Domain of unknown function (DUF3578) IFY67_04759 PF00589 Phage integrase family IFY67_04759 PF13356 Arm DNA-binding domain IFY67_04761 PF00484 Carbonic anhydrase IFY67_04762 PF00916 Sulfate permease family IFY67_04762 PF01740 STAS domain IFY67_04763 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_04763 PF00107 Zinc-binding dehydrogenase IFY67_04764 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04765 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04766 PF00149 Calcineurin-like phosphoesterase IFY67_04767 PF17912 MalK OB fold domain IFY67_04767 PF00005 ABC transporter IFY67_04768 PF13416 Bacterial extracellular solute-binding protein IFY67_04769 PF01261 Xylose isomerase-like TIM barrel IFY67_04770 PF01261 Xylose isomerase-like TIM barrel IFY67_04771 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFY67_04771 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFY67_04772 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_04772 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_04772 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_04773 PF00294 pfkB family carbohydrate kinase IFY67_04774 PF02685 Glucokinase IFY67_04774 PF01380 SIS domain IFY67_04774 PF01418 Helix-turn-helix domain, rpiR family IFY67_04775 PF04962 KduI/IolB family IFY67_04776 PF00171 Aldehyde dehydrogenase family IFY67_04778 PF05872 Bacterial protein of unknown function (DUF853) IFY67_04779 PF03739 Lipopolysaccharide export system permease LptF/LptG IFY67_04780 PF03739 Lipopolysaccharide export system permease LptF/LptG IFY67_04781 PF02789 Cytosol aminopeptidase family, N-terminal domain IFY67_04781 PF00883 Cytosol aminopeptidase family, catalytic domain IFY67_04782 PF04364 DNA polymerase III chi subunit, HolC IFY67_04783 PF10458 Valyl tRNA synthetase tRNA binding arm IFY67_04783 PF00133 tRNA synthetases class I (I, L, M and V) IFY67_04783 PF08264 Anticodon-binding domain of tRNA IFY67_04784 PF00583 Acetyltransferase (GNAT) family IFY67_04785 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IFY67_04786 PF06877 Regulator of ribonuclease activity B IFY67_04787 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IFY67_04787 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IFY67_04788 PF04074 YhcH/YjgK/YiaL IFY67_04789 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IFY67_04789 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IFY67_04790 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IFY67_04790 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IFY67_04791 PF01042 Endoribonuclease L-PSP IFY67_04792 PF00689 Cation transporting ATPase, C-terminus IFY67_04792 PF00690 Cation transporter/ATPase, N-terminus IFY67_04793 PF00356 Bacterial regulatory proteins, lacI family IFY67_04794 PF02378 Phosphotransferase system, EIIC IFY67_04794 PF00367 phosphotransferase system, EIIB IFY67_04795 PF00128 Alpha amylase, catalytic domain IFY67_04795 PF11941 Domain of unknown function (DUF3459) IFY67_04796 PF02378 Phosphotransferase system, EIIC IFY67_04797 PF02056 Family 4 glycosyl hydrolase IFY67_04797 PF11975 Family 4 glycosyl hydrolase C-terminal domain IFY67_04798 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_04800 PF03477 ATP cone domain IFY67_04800 PF13597 Anaerobic ribonucleoside-triphosphate reductase IFY67_04802 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IFY67_04803 PF04221 RelB antitoxin IFY67_04804 PF08279 HTH domain IFY67_04804 PF05043 Mga helix-turn-helix domain IFY67_04804 PF00874 PRD domain IFY67_04804 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_04805 PF10282 Lactonase, 7-bladed beta-propeller IFY67_04806 PF07071 KDGP aldolase IFY67_04807 PF03841 L-seryl-tRNA selenium transferase IFY67_04808 PF01979 Amidohydrolase family IFY67_04814 PF07361 Cytochrome b562 IFY67_04815 PF01523 Putative modulator of DNA gyrase IFY67_04816 PF04751 Protein of unknown function (DUF615) IFY67_04819 PF01225 Mur ligase family, catalytic domain IFY67_04819 PF02875 Mur ligase family, glutamate ligase domain IFY67_04819 PF08245 Mur ligase middle domain IFY67_04820 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IFY67_04821 PF02653 Branched-chain amino acid transport system / permease component IFY67_04822 PF02653 Branched-chain amino acid transport system / permease component IFY67_04823 PF00005 ABC transporter IFY67_04824 PF13407 Periplasmic binding protein domain IFY67_04825 PF00719 Inorganic pyrophosphatase IFY67_04828 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like IFY67_04829 PF04357 TamB, inner membrane protein subunit of TAM complex IFY67_04830 PF07244 Surface antigen variable number repeat IFY67_04830 PF01103 Surface antigen IFY67_04830 PF17243 POTRA domain TamA domain 1 IFY67_04831 PF01625 Peptide methionine sulfoxide reductase IFY67_04832 PF00571 CBS domain IFY67_04832 PF01595 Cyclin M transmembrane N-terminal domain IFY67_04832 PF03471 Transporter associated domain IFY67_04833 PF06526 Protein of unknown function (DUF1107) IFY67_04834 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IFY67_04835 PF00459 Inositol monophosphatase family IFY67_04836 PF02872 5'-nucleotidase, C-terminal domain IFY67_04836 PF00149 Calcineurin-like phosphoesterase IFY67_04837 PF01638 HxlR-like helix-turn-helix IFY67_04838 PF05368 NmrA-like family IFY67_04839 PF12833 Helix-turn-helix domain IFY67_04840 PF00892 EamA-like transporter family IFY67_04841 PF01814 Hemerythrin HHE cation binding domain IFY67_04841 PF04405 Domain of Unknown function (DUF542) IFY67_04842 PF00324 Amino acid permease IFY67_04843 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFY67_04843 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IFY67_04844 PF04225 Opacity-associated protein A LysM-like domain IFY67_04844 PF08525 Opacity-associated protein A N-terminal motif IFY67_04845 PF03948 Ribosomal protein L9, C-terminal domain IFY67_04845 PF01281 Ribosomal protein L9, N-terminal domain IFY67_04846 PF01084 Ribosomal protein S18 IFY67_04847 PF00436 Single-strand binding protein family IFY67_04848 PF01250 Ribosomal protein S6 IFY67_04849 PF07338 Protein of unknown function (DUF1471) IFY67_04850 PF07690 Major Facilitator Superfamily IFY67_04851 PF00596 Class II Aldolase and Adducin N-terminal domain IFY67_04852 PF01261 Xylose isomerase-like TIM barrel IFY67_04853 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IFY67_04854 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_04855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_04856 PF03611 PTS system sugar-specific permease component IFY67_04859 PF00455 DeoR C terminal sensor domain IFY67_04859 PF08220 DeoR-like helix-turn-helix domain IFY67_04860 PF00326 Prolyl oligopeptidase family IFY67_04861 PF07338 Protein of unknown function (DUF1471) IFY67_04862 PF07338 Protein of unknown function (DUF1471) IFY67_04863 PF02770 Acyl-CoA dehydrogenase, middle domain IFY67_04863 PF18158 Adaptive response protein AidB N-terminal domain IFY67_04863 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IFY67_04864 PF00588 SpoU rRNA Methylase family IFY67_04864 PF08032 RNA 2'-O ribose methyltransferase substrate binding IFY67_04865 PF08461 Ribonuclease R winged-helix domain IFY67_04865 PF17876 Cold shock domain IFY67_04865 PF00773 RNB domain IFY67_04865 PF00575 S1 RNA binding domain IFY67_04865 PF08206 Ribonuclease B OB domain IFY67_04866 PF02082 Transcriptional regulator IFY67_04867 PF00709 Adenylosuccinate synthetase IFY67_04868 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) IFY67_04870 PF01145 SPFH domain / Band 7 family IFY67_04871 PF12221 Bacterial membrane protein N terminal IFY67_04871 PF01145 SPFH domain / Band 7 family IFY67_04872 PF16360 GTP-binding GTPase Middle Region IFY67_04872 PF13167 GTP-binding GTPase N-terminal IFY67_04872 PF01926 50S ribosome-binding GTPase IFY67_04873 PF17209 Hfq protein IFY67_04875 PF01119 DNA mismatch repair protein, C-terminal domain IFY67_04875 PF08676 MutL C terminal dimerisation domain IFY67_04876 PF01520 N-acetylmuramoyl-L-alanine amidase IFY67_04877 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IFY67_04878 PF03853 YjeF-related protein N-terminus IFY67_04878 PF01256 Carbohydrate kinase IFY67_04879 PF08331 Domain of unknown function (DUF1730) IFY67_04883 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFY67_04884 PF00929 Exonuclease IFY67_04885 PF03193 RsgA GTPase IFY67_04886 PF02666 Phosphatidylserine decarboxylase IFY67_04887 PF00924 Mechanosensitive ion channel IFY67_04887 PF12795 Mechanosensitive ion channel porin domain IFY67_04887 PF12794 Mechanosensitive ion channel inner membrane domain 1 IFY67_04888 PF13520 Amino acid permease IFY67_04889 PF00152 tRNA synthetases class II (D, K and N) IFY67_04890 PF00890 FAD binding domain IFY67_04890 PF02910 Fumarate reductase flavoprotein C-term IFY67_04891 PF13085 2Fe-2S iron-sulfur cluster binding domain IFY67_04891 PF13183 4Fe-4S dicluster domain IFY67_04892 PF02300 Fumarate reductase subunit C IFY67_04893 PF02313 Fumarate reductase subunit D IFY67_04894 PF08212 Lipocalin-like domain IFY67_04895 PF00893 Small Multidrug Resistance protein IFY67_04896 PF08085 Entericidin EcnA/B family IFY67_04898 PF09285 Elongation factor P, C-terminal IFY67_04898 PF08207 Elongation factor P (EF-P) KOW-like domain IFY67_04898 PF01132 Elongation factor P (EF-P) OB domain IFY67_04899 PF04055 Radical SAM superfamily IFY67_04902 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_04902 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_04903 PF13954 PapC N-terminal domain IFY67_04903 PF00577 Outer membrane usher protein IFY67_04903 PF13953 PapC C-terminal domain IFY67_04906 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_04906 PF00529 HlyD membrane-fusion protein of T1SS IFY67_04907 PF03412 Peptidase C39 family IFY67_04907 PF00664 ABC transporter transmembrane region IFY67_04907 PF00005 ABC transporter IFY67_04909 PF13698 Domain of unknown function (DUF4156) IFY67_04910 PF00118 TCP-1/cpn60 chaperonin family IFY67_04911 PF00166 Chaperonin 10 Kd subunit IFY67_04912 PF13520 Amino acid permease IFY67_04913 PF04186 FxsA cytoplasmic membrane protein IFY67_04914 PF10415 Fumarase C C-terminus IFY67_04914 PF00206 Lyase IFY67_04915 PF03605 Anaerobic c4-dicarboxylate membrane transporter IFY67_04916 PF03091 CutA1 divalent ion tolerance protein IFY67_04917 PF02683 Cytochrome C biogenesis protein transmembrane region IFY67_04917 PF11412 Disulphide bond corrector protein DsbC IFY67_04925 PF01522 Polysaccharide deacetylase IFY67_04925 PF14883 Hypothetical glycosyl hydrolase family 13 IFY67_04926 PF00535 Glycosyl transferase family 2 IFY67_04929 PF03741 Integral membrane protein TerC family IFY67_04930 PF01556 DnaJ C terminal domain IFY67_04930 PF00226 DnaJ domain IFY67_04933 PF06406 StbA protein IFY67_04935 PF11975 Family 4 glycosyl hydrolase C-terminal domain IFY67_04935 PF02056 Family 4 glycosyl hydrolase IFY67_04936 PF12833 Helix-turn-helix domain IFY67_04937 PF00083 Sugar (and other) transporter IFY67_04937 PF08946 Osmosensory transporter coiled coil IFY67_04938 PF08274 PhnA Zinc-Ribbon IFY67_04938 PF03831 PhnA domain IFY67_04939 PF06983 3-demethylubiquinone-9 3-methyltransferase IFY67_04940 PF00392 Bacterial regulatory proteins, gntR family IFY67_04940 PF07702 UTRA domain IFY67_04941 PF06754 Phosphonate metabolism protein PhnG IFY67_04942 PF05845 Bacterial phosphonate metabolism protein (PhnH) IFY67_04943 PF05861 Bacterial phosphonate metabolism protein (PhnI) IFY67_04944 PF06007 Phosphonate metabolism protein PhnJ IFY67_04945 PF00005 ABC transporter IFY67_04946 PF00005 ABC transporter IFY67_04947 PF07969 Amidohydrolase family IFY67_04949 PF12706 Beta-lactamase superfamily domain IFY67_04951 PF00072 Response regulator receiver domain IFY67_04951 PF13426 PAS domain IFY67_04951 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_04952 PF00005 ABC transporter IFY67_04953 PF02653 Branched-chain amino acid transport system / permease component IFY67_04954 PF13407 Periplasmic binding protein domain IFY67_04958 PF00486 Transcriptional regulatory protein, C terminal IFY67_04958 PF00072 Response regulator receiver domain IFY67_04959 PF00384 Molybdopterin oxidoreductase IFY67_04959 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_04959 PF01568 Molydopterin dinucleotide binding domain IFY67_04960 PF01568 Molydopterin dinucleotide binding domain IFY67_04960 PF00384 Molybdopterin oxidoreductase IFY67_04960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_04961 PF08238 Sel1 repeat IFY67_04962 PF00375 Sodium:dicarboxylate symporter family IFY67_04963 PF13193 AMP-binding enzyme C-terminal domain IFY67_04963 PF00501 AMP-binding enzyme IFY67_04963 PF16177 Acetyl-coenzyme A synthetase N-terminus IFY67_04964 PF04341 Protein of unknown function, DUF485 IFY67_04965 PF00474 Sodium:solute symporter family IFY67_04968 PF13953 PapC C-terminal domain IFY67_04968 PF13954 PapC N-terminal domain IFY67_04968 PF00577 Outer membrane usher protein IFY67_04969 PF13954 PapC N-terminal domain IFY67_04969 PF13953 PapC C-terminal domain IFY67_04969 PF00577 Outer membrane usher protein IFY67_04970 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IFY67_04970 PF02753 Pili assembly chaperone PapD, C-terminal domain IFY67_04971 PF00419 Fimbrial protein IFY67_04972 PF04172 LrgB-like family IFY67_04973 PF03788 LrgA family IFY67_04974 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_04974 PF03466 LysR substrate binding domain IFY67_04975 PF00999 Sodium/hydrogen exchanger family IFY67_04976 PF00860 Permease family IFY67_04977 PF02798 Glutathione S-transferase, N-terminal domain IFY67_04977 PF00043 Glutathione S-transferase, C-terminal domain IFY67_04978 PF09278 MerR, DNA binding IFY67_04978 PF00376 MerR family regulatory protein IFY67_04979 PF12833 Helix-turn-helix domain IFY67_04980 PF00563 EAL domain IFY67_04980 PF12792 CSS motif domain associated with EAL IFY67_04981 PF15940 Family of unknown function IFY67_04982 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_04985 PF08402 TOBE domain IFY67_04985 PF00005 ABC transporter IFY67_04986 PF00753 Metallo-beta-lactamase superfamily IFY67_04986 PF12706 Beta-lactamase superfamily domain IFY67_04987 PF00356 Bacterial regulatory proteins, lacI family IFY67_04988 PF00459 Inositol monophosphatase family IFY67_04990 PF07244 Surface antigen variable number repeat IFY67_04990 PF01103 Surface antigen IFY67_04991 PF07519 Tannase and feruloyl esterase IFY67_04992 PF12833 Helix-turn-helix domain IFY67_04993 PF00593 TonB dependent receptor IFY67_04993 PF07715 TonB-dependent Receptor Plug Domain IFY67_04994 PF00593 TonB dependent receptor IFY67_04994 PF07715 TonB-dependent Receptor Plug Domain IFY67_04995 PF01464 Transglycosylase SLT domain IFY67_04996 PF00436 Single-strand binding protein family IFY67_04997 PF00005 ABC transporter IFY67_04997 PF17755 UvrA DNA-binding domain IFY67_04997 PF17760 UvrA interaction domain IFY67_04998 PF04237 YjbR IFY67_04999 PF01894 Uncharacterised protein family UPF0047 IFY67_05000 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) IFY67_05001 PF00155 Aminotransferase class I and II IFY67_05002 PF00155 Aminotransferase class I and II IFY67_05003 PF01168 Alanine racemase, N-terminal domain IFY67_05003 PF00842 Alanine racemase, C-terminal domain IFY67_05004 PF03796 DnaB-like helicase C terminal domain IFY67_05004 PF00772 DnaB-like helicase N terminal domain IFY67_05005 PF08240 Alcohol dehydrogenase GroES-like domain IFY67_05005 PF00107 Zinc-binding dehydrogenase IFY67_05006 PF09583 Phage shock protein G (Phageshock_PspG) IFY67_05007 PF01207 Dihydrouridine synthase (Dus) IFY67_05009 PF01475 Ferric uptake regulator family IFY67_05010 PF05532 CsbD-like IFY67_05011 PF01554 MatE IFY67_05012 PF00717 Peptidase S24-like IFY67_05012 PF01726 LexA DNA binding domain IFY67_05013 PF01219 Prokaryotic diacylglycerol kinase IFY67_05014 PF01553 Acyltransferase IFY67_05015 PF01040 UbiA prenyltransferase family IFY67_05016 PF04345 Chorismate lyase IFY67_05017 PF07148 Maltose operon periplasmic protein precursor (MalM) IFY67_05018 PF02264 LamB porin IFY67_05019 PF00005 ABC transporter IFY67_05019 PF17912 MalK OB fold domain IFY67_05020 PF01547 Bacterial extracellular solute-binding protein IFY67_05021 PF14785 Maltose transport system permease protein MalF P2 domain IFY67_05021 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_05022 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_05023 PF06146 Phosphate-starvation-inducible E IFY67_05024 PF03313 Serine dehydratase alpha chain IFY67_05027 PF01042 Endoribonuclease L-PSP IFY67_05029 PF12804 MobA-like NTP transferase domain IFY67_05029 PF14602 Hexapeptide repeat of succinyl-transferase IFY67_05029 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_05030 PF00342 Phosphoglucose isomerase IFY67_05031 PF01842 ACT domain IFY67_05031 PF00696 Amino acid kinase family IFY67_05032 PF01758 Sodium Bile acid symporter family IFY67_05033 PF11656 YjbD family (DUF3811) IFY67_05034 PF00849 RNA pseudouridylate synthase IFY67_05034 PF01479 S4 domain IFY67_05035 PF03575 Peptidase family S51 IFY67_05036 PF02690 Na+/Pi-cotransporter IFY67_05037 PF02310 B12 binding domain IFY67_05037 PF02607 B12 binding domain IFY67_05037 PF02965 Vitamin B12 dependent methionine synthase, activation domain IFY67_05037 PF00809 Pterin binding enzyme IFY67_05037 PF02574 Homocysteine S-methyltransferase IFY67_05038 PF01614 Bacterial transcriptional regulator IFY67_05038 PF09339 IclR helix-turn-helix domain IFY67_05039 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) IFY67_05040 PF00463 Isocitrate lyase family IFY67_05041 PF01274 Malate synthase IFY67_05042 PF04204 Homoserine O-succinyltransferase IFY67_05043 PF13673 Acetyltransferase (GNAT) domain IFY67_05049 PF02142 MGS-like domain IFY67_05049 PF01808 AICARFT/IMPCHase bienzyme IFY67_05050 PF02843 Phosphoribosylglycinamide synthetase, C domain IFY67_05050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IFY67_05050 PF02844 Phosphoribosylglycinamide synthetase, N domain IFY67_05051 PF00158 Sigma-54 interaction domain IFY67_05051 PF02954 Bacterial regulatory protein, Fis family IFY67_05051 PF00072 Response regulator receiver domain IFY67_05052 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_05052 PF00512 His Kinase A (phospho-acceptor) domain IFY67_05053 PF13801 Heavy-metal resistance IFY67_05054 PF07356 Protein of unknown function (DUF1481) IFY67_05055 PF00216 Bacterial DNA-binding protein IFY67_05056 PF04222 Protein of unknown function (DUF416) IFY67_05057 PF04493 Endonuclease V IFY67_05058 PF01208 Uroporphyrinogen decarboxylase (URO-D) IFY67_05059 PF00293 NUDIX domain IFY67_05059 PF09297 NADH pyrophosphatase zinc ribbon domain IFY67_05060 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IFY67_05061 PF13667 ThiC-associated domain IFY67_05061 PF01964 Radical SAM ThiC family IFY67_05062 PF02581 Thiamine monophosphate synthase IFY67_05063 PF00899 ThiF family IFY67_05064 PF02597 ThiS family IFY67_05065 PF05690 Thiazole biosynthesis protein ThiG IFY67_05066 PF04055 Radical SAM superfamily IFY67_05066 PF06968 Biotin and Thiamin Synthesis associated domain IFY67_05067 PF00990 Diguanylate cyclase, GGDEF domain IFY67_05068 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFY67_05069 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IFY67_05070 PF03605 Anaerobic c4-dicarboxylate membrane transporter IFY67_05071 PF00623 RNA polymerase Rpb1, domain 2 IFY67_05071 PF04997 RNA polymerase Rpb1, domain 1 IFY67_05071 PF04983 RNA polymerase Rpb1, domain 3 IFY67_05071 PF05000 RNA polymerase Rpb1, domain 4 IFY67_05071 PF04998 RNA polymerase Rpb1, domain 5 IFY67_05072 PF00562 RNA polymerase Rpb2, domain 6 IFY67_05072 PF04560 RNA polymerase Rpb2, domain 7 IFY67_05072 PF04561 RNA polymerase Rpb2, domain 2 IFY67_05072 PF04563 RNA polymerase beta subunit IFY67_05072 PF04565 RNA polymerase Rpb2, domain 3 IFY67_05072 PF10385 RNA polymerase beta subunit external 1 domain IFY67_05073 PF00542 Ribosomal protein L7/L12 C-terminal domain IFY67_05073 PF16320 Ribosomal protein L7/L12 dimerisation domain IFY67_05074 PF00466 Ribosomal protein L10 IFY67_05075 PF00687 Ribosomal protein L1p/L10e family IFY67_05076 PF03946 Ribosomal protein L11, N-terminal domain IFY67_05076 PF00298 Ribosomal protein L11, RNA binding domain IFY67_05077 PF02357 Transcription termination factor nusG IFY67_05077 PF00467 KOW motif IFY67_05078 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IFY67_05079 PF00009 Elongation factor Tu GTP binding domain IFY67_05079 PF03143 Elongation factor Tu C-terminal domain IFY67_05079 PF03144 Elongation factor Tu domain 2 IFY67_05084 PF00485 Phosphoribulokinase / Uridine kinase family IFY67_05085 PF02237 Biotin protein ligase C terminal domain IFY67_05085 PF03099 Biotin/lipoate A/B protein ligase family IFY67_05085 PF08279 HTH domain IFY67_05086 PF01565 FAD binding domain IFY67_05086 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IFY67_05092 PF12724 Flavodoxin domain IFY67_05093 PF02386 Cation transport protein IFY67_05094 PF02386 Cation transport protein IFY67_05095 PF09186 Domain of unknown function (DUF1949) IFY67_05095 PF01205 Uncharacterized protein family UPF0029 IFY67_05096 PF00557 Metallopeptidase family M24 IFY67_05097 PF00378 Enoyl-CoA hydratase/isomerase IFY67_05097 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IFY67_05097 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IFY67_05098 PF00108 Thiolase, N-terminal domain IFY67_05098 PF02803 Thiolase, C-terminal domain IFY67_05099 PF00175 Oxidoreductase NAD-binding domain IFY67_05099 PF00970 Oxidoreductase FAD-binding domain IFY67_05100 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IFY67_05101 PF02357 Transcription termination factor nusG IFY67_05102 PF01026 TatD related DNase IFY67_05103 PF00902 Sec-independent protein translocase protein (TatC) IFY67_05105 PF02416 mttA/Hcf106 family IFY67_05106 PF03109 ABC1 family IFY67_05107 PF02036 SCP-2 sterol transfer family IFY67_05108 PF01209 ubiE/COQ5 methyltransferase family IFY67_05109 PF02646 RmuC family IFY67_05110 PF01048 Phosphorylase superfamily IFY67_05111 PF01738 Dienelactone hydrolase family IFY67_05112 PF01717 Cobalamin-independent synthase, Catalytic domain IFY67_05112 PF08267 Cobalamin-independent synthase, N-terminal domain IFY67_05113 PF03466 LysR substrate binding domain IFY67_05113 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_05114 PF00892 EamA-like transporter family IFY67_05116 PF12146 Serine aminopeptidase, S33 IFY67_05117 PF01810 LysE type translocator IFY67_05118 PF04754 Putative transposase, YhgA-like IFY67_05119 PF01810 LysE type translocator IFY67_05120 PF00271 Helicase conserved C-terminal domain IFY67_05120 PF00270 DEAD/DEAH box helicase IFY67_05120 PF16124 RecQ zinc-binding IFY67_05120 PF00570 HRDC domain IFY67_05120 PF09382 RQC domain IFY67_05121 PF02253 Phospholipase A1 IFY67_05122 PF03061 Thioesterase superfamily IFY67_05123 PF00892 EamA-like transporter family IFY67_05124 PF01544 CorA-like Mg2+ transporter protein IFY67_05125 PF13361 UvrD-like helicase C-terminal domain IFY67_05125 PF00580 UvrD/REP helicase N-terminal domain IFY67_05126 PF13419 Haloacid dehalogenase-like hydrolase IFY67_05127 PF02899 Phage integrase, N-terminal SAM-like domain IFY67_05127 PF00589 Phage integrase family IFY67_05128 PF04340 Protein of unknown function, DUF484 IFY67_05129 PF01678 Diaminopimelate epimerase IFY67_05130 PF13627 Prokaryotic lipoprotein-attachment site IFY67_05131 PF01491 Frataxin-like domain IFY67_05132 PF01295 Adenylate cyclase, class-I IFY67_05132 PF12633 Adenylate cyclase NT domain IFY67_05133 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IFY67_05133 PF03900 Porphobilinogen deaminase, C-terminal domain IFY67_05134 PF02602 Uroporphyrinogen-III synthase HemD IFY67_05135 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IFY67_05136 PF07219 HemY protein N-terminus IFY67_05136 PF07719 Tetratricopeptide repeat IFY67_05141 PF00324 Amino acid permease IFY67_05142 PF03808 Glycosyl transferase WecB/TagA/CpsF family IFY67_05143 PF06899 WzyE protein, O-antigen assembly polymerase IFY67_05144 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 IFY67_05145 PF01943 Polysaccharide biosynthesis protein IFY67_05146 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IFY67_05148 PF00483 Nucleotidyl transferase IFY67_05149 PF16363 GDP-mannose 4,6 dehydratase IFY67_05150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IFY67_05150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IFY67_05150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IFY67_05151 PF02350 UDP-N-acetylglucosamine 2-epimerase IFY67_05152 PF02706 Chain length determinant protein IFY67_05153 PF00953 Glycosyl transferase family 4 IFY67_05154 PF07497 Rho termination factor, RNA-binding domain IFY67_05154 PF07498 Rho termination factor, N-terminal domain IFY67_05154 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFY67_05155 PF00085 Thioredoxin IFY67_05156 PF00271 Helicase conserved C-terminal domain IFY67_05156 PF00270 DEAD/DEAH box helicase IFY67_05157 PF00271 Helicase conserved C-terminal domain IFY67_05157 PF00270 DEAD/DEAH box helicase IFY67_05158 PF02541 Ppx/GppA phosphatase family IFY67_05159 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_05159 PF03466 LysR substrate binding domain IFY67_05161 PF04474 Protein of unknown function (DUF554) IFY67_05162 PF00580 UvrD/REP helicase N-terminal domain IFY67_05162 PF13361 UvrD-like helicase C-terminal domain IFY67_05165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IFY67_05165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IFY67_05166 PF03466 LysR substrate binding domain IFY67_05166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_05167 PF00291 Pyridoxal-phosphate dependent enzyme IFY67_05167 PF00585 C-terminal regulatory domain of Threonine dehydratase IFY67_05168 PF00920 Dehydratase family IFY67_05169 PF01063 Amino-transferase class IV IFY67_05171 PF00205 Thiamine pyrophosphate enzyme, central domain IFY67_05171 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFY67_05171 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IFY67_05172 PF13335 Magnesium chelatase, subunit ChlI C-terminal IFY67_05172 PF01078 Magnesium chelatase, subunit ChlI IFY67_05173 PF04219 Protein of unknown function, DUF IFY67_05174 PF03466 LysR substrate binding domain IFY67_05174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_05182 PF01177 Asp/Glu/Hydantoin racemase IFY67_05183 PF00593 TonB dependent receptor IFY67_05183 PF07715 TonB-dependent Receptor Plug Domain IFY67_05184 PF05958 tRNA (Uracil-5-)-methyltransferase IFY67_05185 PF07226 Protein of unknown function (DUF1422) IFY67_05186 PF00440 Bacterial regulatory proteins, tetR family IFY67_05187 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFY67_05187 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFY67_05188 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_05188 PF03466 LysR substrate binding domain IFY67_05189 PF14698 Argininosuccinate lyase C-terminal IFY67_05189 PF00206 Lyase IFY67_05190 PF00696 Amino acid kinase family IFY67_05191 PF02774 Semialdehyde dehydrogenase, dimerisation domain IFY67_05191 PF01118 Semialdehyde dehydrogenase, NAD binding domain IFY67_05192 PF01546 Peptidase family M20/M25/M40 IFY67_05192 PF07687 Peptidase dimerisation domain IFY67_05193 PF00311 Phosphoenolpyruvate carboxylase IFY67_05194 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment IFY67_05195 PF12833 Helix-turn-helix domain IFY67_05196 PF00923 Transaldolase/Fructose-6-phosphate aldolase IFY67_05197 PF00465 Iron-containing alcohol dehydrogenase IFY67_05198 PF00892 EamA-like transporter family IFY67_05199 PF02219 Methylenetetrahydrofolate reductase IFY67_05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_05200 PF03466 LysR substrate binding domain IFY67_05201 PF02627 Carboxymuconolactone decarboxylase family IFY67_05202 PF00149 Calcineurin-like phosphoesterase IFY67_05202 PF02872 5'-nucleotidase, C-terminal domain IFY67_05204 PF03447 Homoserine dehydrogenase, NAD binding domain IFY67_05204 PF00742 Homoserine dehydrogenase IFY67_05204 PF00696 Amino acid kinase family IFY67_05205 PF01053 Cys/Met metabolism PLP-dependent enzyme IFY67_05206 PF01340 Met Apo-repressor, MetJ IFY67_05207 PF01197 Ribosomal protein L31 IFY67_05208 PF00270 DEAD/DEAH box helicase IFY67_05208 PF17764 3′ DNA-binding domain (3′BD) IFY67_05208 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IFY67_05208 PF18074 Primosomal protein N C-terminal domain IFY67_05208 PF00271 Helicase conserved C-terminal domain IFY67_05209 PF00356 Bacterial regulatory proteins, lacI family IFY67_05210 PF05036 Sporulation related domain IFY67_05211 PF00227 Proteasome subunit IFY67_05212 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_05212 PF07724 AAA domain (Cdc48 subfamily) IFY67_05212 PF10431 C-terminal, D2-small domain, of ClpB protein IFY67_05213 PF01040 UbiA prenyltransferase family IFY67_05214 PF03737 Aldolase/RraA IFY67_05215 PF00365 Phosphofructokinase IFY67_05216 PF16916 Dimerisation domain of Zinc Transporter IFY67_05216 PF01545 Cation efflux family IFY67_05217 PF07813 LTXXQ motif family protein IFY67_05218 PF00072 Response regulator receiver domain IFY67_05218 PF00486 Transcriptional regulatory protein, C terminal IFY67_05219 PF00512 His Kinase A (phospho-acceptor) domain IFY67_05219 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_05219 PF00672 HAMP domain IFY67_05219 PF16527 Two-component sensor protein CpxA, periplasmic domain IFY67_05220 PF03475 3-alpha domain IFY67_05220 PF03473 MOSC domain IFY67_05221 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IFY67_05221 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IFY67_05222 PF06379 L-rhamnose-proton symport protein (RhaT) IFY67_05223 PF12833 Helix-turn-helix domain IFY67_05223 PF02311 AraC-like ligand binding domain IFY67_05224 PF12833 Helix-turn-helix domain IFY67_05224 PF02311 AraC-like ligand binding domain IFY67_05225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFY67_05225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFY67_05226 PF06134 L-rhamnose isomerase (RhaA) IFY67_05227 PF00596 Class II Aldolase and Adducin N-terminal domain IFY67_05228 PF13407 Periplasmic binding protein domain IFY67_05229 PF00005 ABC transporter IFY67_05230 PF02653 Branched-chain amino acid transport system / permease component IFY67_05231 PF02653 Branched-chain amino acid transport system / permease component IFY67_05232 PF00465 Iron-containing alcohol dehydrogenase IFY67_05233 PF05336 L-rhamnose mutarotase IFY67_05234 PF01306 LacY proton/sugar symporter IFY67_05235 PF16874 Glycosyl hydrolase family 36 C-terminal domain IFY67_05235 PF16875 Glycosyl hydrolase family 36 N-terminal domain IFY67_05236 PF00356 Bacterial regulatory proteins, lacI family IFY67_05236 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IFY67_05241 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFY67_05243 PF01116 Fructose-bisphosphate aldolase class-II IFY67_05244 PF03611 PTS system sugar-specific permease component IFY67_05247 PF00365 Phosphofructokinase IFY67_05249 PF02634 FdhD/NarQ family IFY67_05250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_05250 PF00384 Molybdopterin oxidoreductase IFY67_05250 PF01568 Molydopterin dinucleotide binding domain IFY67_05251 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IFY67_05251 PF01568 Molydopterin dinucleotide binding domain IFY67_05251 PF00384 Molybdopterin oxidoreductase IFY67_05252 PF13247 4Fe-4S dicluster domain IFY67_05252 PF09163 Formate dehydrogenase N, transmembrane IFY67_05253 PF01292 Prokaryotic cytochrome b561 IFY67_05254 PF04216 Protein involved in formate dehydrogenase formation IFY67_05257 PF07859 alpha/beta hydrolase fold IFY67_05258 PF09500 Putative thioesterase (yiiD_Cterm) IFY67_05258 PF00583 Acetyltransferase (GNAT) family IFY67_05259 PF02580 D-Tyr-tRNA(Tyr) deacylase IFY67_05260 PF03631 Virulence factor BrkB IFY67_05261 PF13419 Haloacid dehalogenase-like hydrolase IFY67_05262 PF00679 Elongation factor G C-terminus IFY67_05262 PF00009 Elongation factor Tu GTP binding domain IFY67_05262 PF03144 Elongation factor Tu domain 2 IFY67_05263 PF03951 Glutamine synthetase, beta-Grasp domain IFY67_05263 PF00120 Glutamine synthetase, catalytic domain IFY67_05264 PF00989 PAS fold IFY67_05264 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_05264 PF00512 His Kinase A (phospho-acceptor) domain IFY67_05265 PF02954 Bacterial regulatory protein, Fis family IFY67_05265 PF00158 Sigma-54 interaction domain IFY67_05265 PF00072 Response regulator receiver domain IFY67_05266 PF06969 HemN C-terminal domain IFY67_05266 PF04055 Radical SAM superfamily IFY67_05267 PF04055 Radical SAM superfamily IFY67_05267 PF06969 HemN C-terminal domain IFY67_05268 PF04220 Der GTPase activator (YihI) IFY67_05269 PF01926 50S ribosome-binding GTPase IFY67_05270 PF01612 3'-5' exonuclease IFY67_05270 PF00476 DNA polymerase family A IFY67_05270 PF01367 5'-3' exonuclease, C-terminal SAM fold IFY67_05270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IFY67_05271 PF01553 Acyltransferase IFY67_05272 PF01323 DSBA-like thioredoxin domain IFY67_05273 PF01636 Phosphotransferase enzyme family IFY67_05274 PF06288 Protein of unknown function (DUF1040) IFY67_05275 PF12804 MobA-like NTP transferase domain IFY67_05276 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IFY67_05281 PF00392 Bacterial regulatory proteins, gntR family IFY67_05281 PF07729 FCD domain IFY67_05282 PF07690 Major Facilitator Superfamily IFY67_05283 PF00356 Bacterial regulatory proteins, lacI family IFY67_05284 PF00356 Bacterial regulatory proteins, lacI family IFY67_05285 PF00294 pfkB family carbohydrate kinase IFY67_05286 PF13407 Periplasmic binding protein domain IFY67_05287 PF02653 Branched-chain amino acid transport system / permease component IFY67_05288 PF00005 ABC transporter IFY67_05289 PF05025 RbsD / FucU transport protein family IFY67_05290 PF02705 K+ potassium transporter IFY67_05291 PF07728 AAA domain (dynein-related subfamily) IFY67_05291 PF17868 AAA lid domain IFY67_05291 PF12592 Protein of unknown function (DUF3763) IFY67_05292 PF05762 VWA domain containing CoxE-like protein IFY67_05293 PF03590 Aspartate-ammonia ligase IFY67_05294 PF01037 Lrp/AsnC ligand binding domain IFY67_05295 PF00258 Flavodoxin IFY67_05296 PF01134 Glucose inhibited division protein A IFY67_05296 PF13932 GidA associated domain IFY67_05297 PF02527 rRNA small subunit methyltransferase G IFY67_05298 PF03899 ATP synthase I chain IFY67_05299 PF00119 ATP synthase A chain IFY67_05300 PF00137 ATP synthase subunit C IFY67_05301 PF00430 ATP synthase B/B' CF(0) IFY67_05302 PF00213 ATP synthase delta (OSCP) subunit IFY67_05303 PF02874 ATP synthase alpha/beta family, beta-barrel domain IFY67_05303 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFY67_05303 PF00306 ATP synthase alpha/beta chain, C terminal domain IFY67_05304 PF00231 ATP synthase IFY67_05305 PF02874 ATP synthase alpha/beta family, beta-barrel domain IFY67_05305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFY67_05306 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IFY67_05306 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IFY67_05307 PF00132 Bacterial transferase hexapeptide (six repeats) IFY67_05307 PF12804 MobA-like NTP transferase domain IFY67_05308 PF01380 SIS domain IFY67_05309 PF12849 PBP superfamily domain IFY67_05310 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_05311 PF00528 Binding-protein-dependent transport system inner membrane component IFY67_05312 PF00005 ABC transporter IFY67_05313 PF01895 PhoU domain IFY67_05314 PF11471 Maltoporin periplasmic N-terminal extension IFY67_05314 PF02264 LamB porin IFY67_05315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IFY67_05315 PF00756 Putative esterase IFY67_05316 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IFY67_05317 PF13419 Haloacid dehalogenase-like hydrolase IFY67_05318 PF00860 Permease family IFY67_05319 PF03358 NADPH-dependent FMN reductase IFY67_05321 PF03466 LysR substrate binding domain IFY67_05321 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFY67_05322 PF07690 Major Facilitator Superfamily IFY67_05324 PF10396 GTP-binding protein TrmE N-terminus IFY67_05324 PF01926 50S ribosome-binding GTPase IFY67_05324 PF12631 MnmE helical domain IFY67_05325 PF02096 60Kd inner membrane protein IFY67_05325 PF14849 YidC periplasmic domain IFY67_05327 PF01051 Initiator Replication protein IFY67_05328 PF13614 AAA domain IFY67_05329 PF00589 Phage integrase family IFY67_05331 PF13610 DDE domain IFY67_05334 PF01845 CcdB protein IFY67_05335 PF07362 Post-segregation antitoxin CcdA IFY67_05340 PF13737 Transposase DDE domain IFY67_05348 PF13610 DDE domain IFY67_05349 PF01526 Tn3 transposase DDE domain IFY67_05349 PF13700 Domain of unknown function (DUF4158) IFY67_05350 PF00892 EamA-like transporter family IFY67_05351 PF07690 Major Facilitator Superfamily IFY67_05352 PF00440 Bacterial regulatory proteins, tetR family IFY67_05352 PF02909 Tetracyclin repressor-like, C-terminal domain IFY67_05353 PF01526 Tn3 transposase DDE domain IFY67_05353 PF13700 Domain of unknown function (DUF4158) IFY67_05354 PF13610 DDE domain IFY67_05356 PF00905 Penicillin binding protein transpeptidase domain IFY67_05358 PF13610 DDE domain IFY67_05359 PF00589 Phage integrase family IFY67_05359 PF13495 Phage integrase, N-terminal SAM-like domain IFY67_05361 PF13610 DDE domain IFY67_05362 PF09019 EcoRII C terminal IFY67_05362 PF09217 Restriction endonuclease EcoRII, N-terminal IFY67_05363 PF18284 DNA methylase N-terminal domain IFY67_05363 PF00145 C-5 cytosine-specific DNA methylase IFY67_05364 PF13610 DDE domain IFY67_05365 PF01526 Tn3 transposase DDE domain IFY67_05365 PF13700 Domain of unknown function (DUF4158) IFY67_05370 PF13737 Transposase DDE domain IFY67_05373 PF02796 Helix-turn-helix domain of resolvase IFY67_05373 PF00239 Resolvase, N terminal domain IFY67_05375 PF03513 Cloacin immunity protein IFY67_05376 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 IFY67_05376 PF09000 Cytotoxic IFY67_05376 PF03515 Colicin-like bacteriocin tRNase domain IFY67_05381 PF01815 Rop protein IFY67_05387 PF13610 DDE domain IFY67_05389 PF01526 Tn3 transposase DDE domain IFY67_05389 PF13700 Domain of unknown function (DUF4158) IFY67_05390 PF13610 DDE domain IFY67_05393 PF04754 Putative transposase, YhgA-like IFY67_05396 PF13610 DDE domain IFY67_05397 PF02387 IncFII RepA protein family IFY67_05398 PF02387 IncFII RepA protein family IFY67_05399 PF10723 Replication regulatory protein RepB IFY67_05405 PF12602 Fertility inhibition protein N terminal IFY67_05405 PF04352 ProQ/FINO family IFY67_05406 PF05857 TraX protein IFY67_05407 PF18340 DNA relaxase TraI 2B/2B-like domain IFY67_05407 PF18272 single-stranded DNA binding TraI N-terminal subdomain IFY67_05407 PF08751 TrwC relaxase IFY67_05407 PF07057 DNA helicase TraI IFY67_05408 PF10412 Type IV secretion-system coupling protein DNA-binding domain IFY67_05408 PF12615 F sex factor protein N terminal IFY67_05410 PF05818 Enterobacterial TraT complement resistance protein IFY67_05412 PF07916 TraG-like protein, N-terminal region IFY67_05413 PF06122 Conjugative relaxosome accessory transposon protein IFY67_05415 PF13728 F plasmid transfer operon protein IFY67_05416 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) IFY67_05417 PF13728 F plasmid transfer operon protein IFY67_05420 PF11100 Conjugal transfer protein TrbE IFY67_05421 PF06986 Type-1V conjugative transfer system mating pair stabilisation IFY67_05422 PF09673 Type-F conjugative transfer system pilin assembly protein IFY67_05423 PF06834 TraU protein IFY67_05425 PF12477 Sex factor F TraW protein N terminal IFY67_05426 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) IFY67_05427 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer IFY67_05428 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer IFY67_05434 PF09676 Type IV conjugative transfer system lipoprotein (TraV) IFY67_05435 PF03743 Bacterial conjugation TrbI-like protein IFY67_05436 PF06586 TraK protein IFY67_05437 PF05309 TraE protein IFY67_05438 PF07178 TraL protein IFY67_05439 PF05513 TraA IFY67_05441 PF05261 TraM protein, DNA-binding IFY67_05442 PF01464 Transglycosylase SLT domain IFY67_05443 PF06067 Domain of unknown function (DUF932) IFY67_05444 PF01381 Helix-turn-helix IFY67_05451 PF01848 Hok/gef family IFY67_05455 PF06290 Plasmid SOS inhibition protein (PsiB) IFY67_05456 PF02195 ParB-like nuclease domain IFY67_05457 PF06006 Bacterial protein of unknown function (DUF905) IFY67_05458 PF00436 Single-strand binding protein family IFY67_05467 PF03230 Antirestriction protein IFY67_05468 PF03230 Antirestriction protein IFY67_05470 PF07128 Protein of unknown function (DUF1380) IFY67_05472 PF01555 DNA methylase IFY67_05475 PF06406 StbA protein IFY67_05476 PF00717 Peptidase S24-like IFY67_05477 PF11799 impB/mucB/samB family C-terminal domain IFY67_05477 PF00817 impB/mucB/samB family IFY67_05477 PF13438 Domain of unknown function (DUF4113) IFY67_05478 PF01051 Initiator Replication protein IFY67_05479 PF00589 Phage integrase family IFY67_05480 PF00990 Diguanylate cyclase, GGDEF domain IFY67_05480 PF13185 GAF domain IFY67_05481 PF13737 Transposase DDE domain IFY67_05482 PF00563 EAL domain IFY67_05482 PF12792 CSS motif domain associated with EAL IFY67_05483 PF10011 Predicted membrane protein (DUF2254) IFY67_05484 PF02028 BCCT, betaine/carnitine/choline family transporter IFY67_05485 PF03400 IS1 transposase IFY67_05486 PF00665 Integrase core domain IFY67_05486 PF13276 HTH-like domain IFY67_05487 PF01527 Transposase IFY67_05488 PF03400 IS1 transposase IFY67_05491 PF00672 HAMP domain IFY67_05491 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_05491 PF00512 His Kinase A (phospho-acceptor) domain IFY67_05492 PF00486 Transcriptional regulatory protein, C terminal IFY67_05492 PF00072 Response regulator receiver domain IFY67_05493 PF02321 Outer membrane efflux protein IFY67_05494 PF11604 Copper binding periplasmic protein CusF IFY67_05495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IFY67_05496 PF00873 AcrB/AcrD/AcrF family IFY67_05498 PF04945 YHS domain IFY67_05499 PF04945 YHS domain IFY67_05502 PF01476 LysM domain IFY67_05502 PF08525 Opacity-associated protein A N-terminal motif IFY67_05502 PF01551 Peptidase family M23 IFY67_05504 PF07731 Multicopper oxidase IFY67_05504 PF07732 Multicopper oxidase IFY67_05504 PF00394 Multicopper oxidase IFY67_05505 PF07732 Multicopper oxidase IFY67_05505 PF00394 Multicopper oxidase IFY67_05505 PF07731 Multicopper oxidase IFY67_05506 PF05275 Copper resistance protein B precursor (CopB) IFY67_05507 PF04234 CopC domain IFY67_05508 PF05425 Copper resistance protein D IFY67_05509 PF00072 Response regulator receiver domain IFY67_05509 PF00486 Transcriptional regulatory protein, C terminal IFY67_05510 PF00512 His Kinase A (phospho-acceptor) domain IFY67_05510 PF00672 HAMP domain IFY67_05510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_05512 PF00665 Integrase core domain IFY67_05513 PF00230 Major intrinsic protein IFY67_05515 PF03358 NADPH-dependent FMN reductase IFY67_05518 PF02374 Anion-transporting ATPase IFY67_05519 PF02374 Anion-transporting ATPase IFY67_05522 PF03960 ArsC family IFY67_05523 PF02040 Arsenical pump membrane protein IFY67_05524 PF02374 Anion-transporting ATPase IFY67_05525 PF02374 Anion-transporting ATPase IFY67_05526 PF06953 Arsenical resistance operon trans-acting repressor ArsD IFY67_05527 PF01022 Bacterial regulatory protein, arsR family IFY67_05532 PF05321 Haemolysin expression modulating protein IFY67_05536 PF13333 Integrase core domain IFY67_05536 PF13276 HTH-like domain IFY67_05536 PF01527 Transposase IFY67_05536 PF00665 Integrase core domain IFY67_05538 PF01435 Peptidase family M48 IFY67_05542 PF07724 AAA domain (Cdc48 subfamily) IFY67_05542 PF00004 ATPase family associated with various cellular activities (AAA) IFY67_05542 PF17871 AAA lid domain IFY67_05542 PF02861 Clp amino terminal domain, pathogenicity island component IFY67_05542 PF10431 C-terminal, D2-small domain, of ClpB protein IFY67_05543 PF00011 Hsp20/alpha crystallin family IFY67_05545 PF03400 IS1 transposase IFY67_05546 PF00795 Carbon-nitrogen hydrolase IFY67_05547 PF00005 ABC transporter IFY67_05548 PF00005 ABC transporter IFY67_05548 PF12399 Branched-chain amino acid ATP-binding cassette transporter IFY67_05549 PF02653 Branched-chain amino acid transport system / permease component IFY67_05550 PF02653 Branched-chain amino acid transport system / permease component IFY67_05550 PF11862 Domain of unknown function (DUF3382) IFY67_05551 PF13458 Periplasmic binding protein IFY67_05552 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFY67_05552 PF00512 His Kinase A (phospho-acceptor) domain IFY67_05552 PF18415 Histidine kinase receptor ArcB trans-membrane domain IFY67_05552 PF01627 Hpt domain IFY67_05552 PF00989 PAS fold IFY67_05552 PF00072 Response regulator receiver domain IFY67_05553 PF00072 Response regulator receiver domain IFY67_05553 PF00486 Transcriptional regulatory protein, C terminal IFY67_05554 PF14319 Transposase zinc-binding domain IFY67_05554 PF04986 Putative transposase IFY67_05555 PF13737 Transposase DDE domain IFY67_05556 PF02371 Transposase IS116/IS110/IS902 family IFY67_05556 PF01548 Transposase IFY67_05558 PF13333 Integrase core domain IFY67_05558 PF13276 HTH-like domain IFY67_05558 PF00665 Integrase core domain IFY67_05559 PF13592 Winged helix-turn helix IFY67_05559 PF13358 DDE superfamily endonuclease IFY67_05560 PF13610 DDE domain IFY67_05561 PF13007 Transposase C of IS166 homeodomain IFY67_05561 PF13005 zinc-finger binding domain of transposase IS66 IFY67_05561 PF13817 IS66 C-terminal element IFY67_05561 PF03050 Transposase IS66 family IFY67_05565 PF13610 DDE domain IFY67_05566 PF05309 TraE protein IFY67_05567 PF07178 TraL protein IFY67_05568 PF05513 TraA IFY67_05570 PF05261 TraM protein, DNA-binding IFY67_05571 PF01464 Transglycosylase SLT domain IFY67_05572 PF06067 Domain of unknown function (DUF932) IFY67_05573 PF06067 Domain of unknown function (DUF932) IFY67_05574 PF01381 Helix-turn-helix IFY67_05581 PF01848 Hok/gef family IFY67_05586 PF06290 Plasmid SOS inhibition protein (PsiB) IFY67_05587 PF02195 ParB-like nuclease domain IFY67_05588 PF06006 Bacterial protein of unknown function (DUF905) IFY67_05589 PF00436 Single-strand binding protein family IFY67_05595 PF03230 Antirestriction protein IFY67_05597 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IFY67_05598 PF00717 Peptidase S24-like IFY67_05599 PF00817 impB/mucB/samB family IFY67_05599 PF11799 impB/mucB/samB family C-terminal domain IFY67_05599 PF13438 Domain of unknown function (DUF4113) IFY67_05603 PF12759 InsA C-terminal domain IFY67_05603 PF03811 InsA N-terminal domain IFY67_05604 PF03400 IS1 transposase IFY67_05606 PF13683 Integrase core domain IFY67_05606 PF13276 HTH-like domain IFY67_05607 PF01527 Transposase IFY67_05608 PF02195 ParB-like nuclease domain IFY67_05608 PF18090 Centromere-binding protein HTH domain IFY67_05609 PF13614 AAA domain IFY67_05610 PF00186 Dihydrofolate reductase