locus-tag class description CSC00_0001 PF02796 Helix-turn-helix domain of resolvase CSC00_0001 PF00239 Resolvase, N terminal domain CSC00_0002 PF13610 DDE domain CSC00_0003 PF13610 DDE domain CSC00_0004 PF00809 Pterin binding enzyme CSC00_0005 PF01909 Nucleotidyltransferase domain CSC00_0005 PF13427 Domain of unknown function (DUF4111) CSC00_0006 PF13610 DDE domain CSC00_0016 PF01609 Transposase DDE domain CSC00_0016 PF05598 Transposase domain (DUF772) CSC00_0017 PF06791 Prophage tail length tape measure protein CSC00_0033 PF10668 Phage terminase small subunit CSC00_0033 PF03592 Terminase small subunit CSC00_0064 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0064 PF12911 N-terminal TM domain of oligopeptide transport permease C CSC00_0065 PF00005 ABC transporter CSC00_0065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_0066 PF00005 ABC transporter CSC00_0067 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CSC00_0068 PF05962 HutD CSC00_0073 PF00773 RNB domain CSC00_0073 PF08206 Ribonuclease B OB domain CSC00_0073 PF17876 Cold shock domain CSC00_0073 PF00575 S1 RNA binding domain CSC00_0075 PF08220 DeoR-like helix-turn-helix domain CSC00_0075 PF00455 DeoR C terminal sensor domain CSC00_0077 PF05433 Glycine zipper 2TM domain CSC00_0078 PF01253 Translation initiation factor SUI1 CSC00_0079 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CSC00_0080 PF18073 Rubredoxin metal binding domain CSC00_0081 PF06305 Lipopolysaccharide assembly protein A domain CSC00_0082 PF01569 PAP2 superfamily CSC00_0083 PF00925 GTP cyclohydrolase II CSC00_0084 PF00694 Aconitase C-terminal domain CSC00_0084 PF00330 Aconitase family (aconitate hydratase) CSC00_0087 PF03466 LysR substrate binding domain CSC00_0087 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0089 PF01131 DNA topoisomerase CSC00_0089 PF08272 Topoisomerase I zinc-ribbon-like CSC00_0089 PF01396 Topoisomerase DNA binding C4 zinc finger CSC00_0089 PF01751 Toprim domain CSC00_0092 PF10692 Protein of unknown function (DUF2498) CSC00_0093 PF01343 Peptidase family S49 CSC00_0093 PF08496 Peptidase family S49 N-terminal CSC00_0095 PF00106 short chain dehydrogenase CSC00_0096 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CSC00_0096 PF12557 Cob(I)alamin adenosyltransferase N terminal CSC00_0097 PF00849 RNA pseudouridylate synthase CSC00_0097 PF01479 S4 domain CSC00_0098 PF03466 LysR substrate binding domain CSC00_0098 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0100 PF01300 Telomere recombination CSC00_0101 PF02811 PHP domain CSC00_0102 PF04715 Anthranilate synthase component I, N terminal region CSC00_0102 PF00425 chorismate binding enzyme CSC00_0103 PF02885 Glycosyl transferase family, helical bundle domain CSC00_0103 PF00117 Glutamine amidotransferase class-I CSC00_0103 PF00591 Glycosyl transferase family, a/b domain CSC00_0104 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CSC00_0104 PF00218 Indole-3-glycerol phosphate synthase CSC00_0105 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_0106 PF00290 Tryptophan synthase alpha chain CSC00_0107 PF05161 MOFRL family CSC00_0107 PF13660 Domain of unknown function (DUF4147) CSC00_0108 PF00180 Isocitrate/isopropylmalate dehydrogenase CSC00_0109 PF07690 Major Facilitator Superfamily CSC00_0110 PF03466 LysR substrate binding domain CSC00_0110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0114 PF00106 short chain dehydrogenase CSC00_0115 PF07715 TonB-dependent Receptor Plug Domain CSC00_0115 PF00593 TonB dependent receptor CSC00_0116 PF13640 2OG-Fe(II) oxygenase superfamily CSC00_0116 PF18331 PKHD-type hydroxylase C-terminal domain CSC00_0117 PF03922 OmpW family CSC00_0118 PF03692 Putative zinc- or iron-chelating domain CSC00_0120 PF04279 Intracellular septation protein A CSC00_0121 PF07715 TonB-dependent Receptor Plug Domain CSC00_0121 PF00593 TonB dependent receptor CSC00_0122 PF03061 Thioesterase superfamily CSC00_0123 PF14002 YniB-like protein CSC00_0124 PF13419 Haloacid dehalogenase-like hydrolase CSC00_0126 PF04307 LexA-binding, inner membrane-associated putative hydrolase CSC00_0128 PF10729 Cell division activator CedA CSC00_0129 PF18011 C-terminal domain found in long catalases CSC00_0129 PF00199 Catalase CSC00_0129 PF06628 Catalase-related immune-responsive CSC00_0130 PF04794 YdjC-like protein CSC00_0131 PF02056 Family 4 glycosyl hydrolase CSC00_0131 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSC00_0132 PF07883 Cupin domain CSC00_0132 PF12833 Helix-turn-helix domain CSC00_0133 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSC00_0134 PF02378 Phosphotransferase system, EIIC CSC00_0136 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_0137 PF04355 SmpA / OmlA family CSC00_0138 PF02540 NAD synthase CSC00_0140 PF07813 LTXXQ motif family protein CSC00_0142 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CSC00_0143 PF04996 Succinylarginine dihydrolase CSC00_0144 PF00171 Aldehyde dehydrogenase family CSC00_0145 PF04958 Arginine N-succinyltransferase beta subunit CSC00_0146 PF00202 Aminotransferase class-III CSC00_0147 PF03372 Endonuclease/Exonuclease/phosphatase family CSC00_0148 PF09335 SNARE associated Golgi protein CSC00_0149 PF09335 SNARE associated Golgi protein CSC00_0150 PF02627 Carboxymuconolactone decarboxylase family CSC00_0151 PF13416 Bacterial extracellular solute-binding protein CSC00_0152 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0153 PF00005 ABC transporter CSC00_0154 PF00581 Rhodanese-like domain CSC00_0155 PF01066 CDP-alcohol phosphatidyltransferase CSC00_0156 PF00293 NUDIX domain CSC00_0157 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CSC00_0157 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CSC00_0158 PF00550 Phosphopantetheine attachment site CSC00_0158 PF14765 Polyketide synthase dehydratase CSC00_0158 PF02801 Beta-ketoacyl synthase, C-terminal domain CSC00_0158 PF08659 KR domain CSC00_0158 PF00109 Beta-ketoacyl synthase, N-terminal domain CSC00_0158 PF16197 Ketoacyl-synthetase C-terminal extension CSC00_0158 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_0158 PF00698 Acyl transferase domain CSC00_0159 PF01751 Toprim domain CSC00_0159 PF01131 DNA topoisomerase CSC00_0160 PF00586 AIR synthase related protein, N-terminal domain CSC00_0160 PF02769 AIR synthase related protein, C-terminal domain CSC00_0161 PF01569 PAP2 superfamily CSC00_0162 PF00665 Integrase core domain CSC00_0162 PF13333 Integrase core domain CSC00_0162 PF13276 HTH-like domain CSC00_0164 PF00881 Nitroreductase family CSC00_0165 PF01343 Peptidase family S49 CSC00_0166 PF00710 Asparaginase, N-terminal CSC00_0166 PF17763 Glutaminase/Asparaginase C-terminal domain CSC00_0167 PF00857 Isochorismatase family CSC00_0168 PF00083 Sugar (and other) transporter CSC00_0169 PF08220 DeoR-like helix-turn-helix domain CSC00_0169 PF00455 DeoR C terminal sensor domain CSC00_0170 PF00248 Aldo/keto reductase family CSC00_0171 PF00294 pfkB family carbohydrate kinase CSC00_0172 PF01116 Fructose-bisphosphate aldolase class-II CSC00_0173 PF00107 Zinc-binding dehydrogenase CSC00_0173 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_0174 PF00083 Sugar (and other) transporter CSC00_0175 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_0175 PF00107 Zinc-binding dehydrogenase CSC00_0176 PF00704 Glycosyl hydrolases family 18 CSC00_0176 PF00041 Fibronectin type III domain CSC00_0177 PF01844 HNH endonuclease CSC00_0178 PF07023 Protein of unknown function (DUF1315) CSC00_0179 PF01641 SelR domain CSC00_0180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSC00_0180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSC00_0181 PF01263 Aldose 1-epimerase CSC00_0182 PF00248 Aldo/keto reductase family CSC00_0183 PF06629 MltA-interacting protein MipA CSC00_0184 PF08298 PrkA AAA domain CSC00_0184 PF06798 PrkA serine protein kinase C-terminal domain CSC00_0185 PF04285 Protein of unknown function (DUF444) CSC00_0187 PF00255 Glutathione peroxidase CSC00_0190 PF03466 LysR substrate binding domain CSC00_0190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0191 PF07690 Major Facilitator Superfamily CSC00_0193 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0193 PF03466 LysR substrate binding domain CSC00_0194 PF11798 IMS family HHH motif CSC00_0194 PF11799 impB/mucB/samB family C-terminal domain CSC00_0194 PF00817 impB/mucB/samB family CSC00_0194 PF13438 Domain of unknown function (DUF4113) CSC00_0195 PF00717 Peptidase S24-like CSC00_0196 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSC00_0197 PF06183 DinI-like family CSC00_0198 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CSC00_0200 PF04073 Aminoacyl-tRNA editing domain CSC00_0201 PF04284 Protein of unknown function (DUF441) CSC00_0202 PF02311 AraC-like ligand binding domain CSC00_0202 PF12833 Helix-turn-helix domain CSC00_0203 PF07690 Major Facilitator Superfamily CSC00_0204 PF00117 Glutamine amidotransferase class-I CSC00_0204 PF06418 CTP synthase N-terminus CSC00_0205 PF04463 Protein of unknown function (DUF523) CSC00_0206 PF04343 Protein of unknown function, DUF488 CSC00_0207 PF03891 Domain of unknown function (DUF333) CSC00_0208 PF13185 GAF domain CSC00_0208 PF00990 Diguanylate cyclase, GGDEF domain CSC00_0211 PF10749 Protein of unknown function (DUF2534) CSC00_0212 PF01810 LysE type translocator CSC00_0213 PF03279 Bacterial lipid A biosynthesis acyltransferase CSC00_0215 PF00710 Asparaginase, N-terminal CSC00_0215 PF17763 Glutaminase/Asparaginase C-terminal domain CSC00_0216 PF01966 HD domain CSC00_0217 PF00990 Diguanylate cyclase, GGDEF domain CSC00_0218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0218 PF03466 LysR substrate binding domain CSC00_0219 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CSC00_0225 PF02322 Cytochrome bd terminal oxidase subunit II CSC00_0226 PF01654 Cytochrome bd terminal oxidase subunit I CSC00_0227 PF05067 Manganese containing catalase CSC00_0228 PF05974 Domain of unknown function (DUF892) CSC00_0229 PF05974 Domain of unknown function (DUF892) CSC00_0230 PF10685 Stress-induced bacterial acidophilic repeat motif CSC00_0232 PF13823 Alcohol dehydrogenase GroES-associated CSC00_0232 PF00107 Zinc-binding dehydrogenase CSC00_0232 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_0233 PF06906 Protein of unknown function (DUF1272) CSC00_0237 PF00180 Isocitrate/isopropylmalate dehydrogenase CSC00_0238 PF00849 RNA pseudouridylate synthase CSC00_0239 PF00293 NUDIX domain CSC00_0241 PF04356 Protein of unknown function (DUF489) CSC00_0242 PF00206 Lyase CSC00_0242 PF08328 Adenylosuccinate lyase C-terminal CSC00_0245 PF00486 Transcriptional regulatory protein, C terminal CSC00_0245 PF00072 Response regulator receiver domain CSC00_0246 PF08918 PhoQ Sensor CSC00_0246 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_0247 PF08007 Cupin superfamily protein CSC00_0248 PF01546 Peptidase family M20/M25/M40 CSC00_0248 PF07687 Peptidase dimerisation domain CSC00_0249 PF08402 TOBE domain CSC00_0249 PF00005 ABC transporter CSC00_0250 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0251 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0252 PF13416 Bacterial extracellular solute-binding protein CSC00_0254 PF00501 AMP-binding enzyme CSC00_0254 PF13193 AMP-binding enzyme C-terminal domain CSC00_0256 PF02146 Sir2 family CSC00_0257 PF00480 ROK family CSC00_0258 PF02687 FtsX-like permease family CSC00_0258 PF12704 MacB-like periplasmic core domain CSC00_0259 PF00005 ABC transporter CSC00_0260 PF12704 MacB-like periplasmic core domain CSC00_0260 PF02687 FtsX-like permease family CSC00_0262 PF17757 UvrB interaction domain CSC00_0262 PF00271 Helicase conserved C-terminal domain CSC00_0262 PF00270 DEAD/DEAH box helicase CSC00_0262 PF03461 TRCF domain CSC00_0262 PF02559 CarD-like/TRCF domain CSC00_0263 PF17969 L,D-transpeptidase C-terminal domain CSC00_0263 PF01476 LysM domain CSC00_0263 PF03734 L,D-transpeptidase catalytic domain CSC00_0264 PF07338 Protein of unknown function (DUF1471) CSC00_0266 PF00440 Bacterial regulatory proteins, tetR family CSC00_0268 PF07715 TonB-dependent Receptor Plug Domain CSC00_0268 PF00593 TonB dependent receptor CSC00_0269 PF05433 Glycine zipper 2TM domain CSC00_0270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_0271 PF05728 Uncharacterised protein family (UPF0227) CSC00_0272 PF00933 Glycosyl hydrolase family 3 N terminal domain CSC00_0273 PF01636 Phosphotransferase enzyme family CSC00_0274 PF13036 Peptidoglycan-synthase activator LpoB CSC00_0275 PF07233 Protein of unknown function (DUF1425) CSC00_0276 PF01230 HIT domain CSC00_0277 PF02378 Phosphotransferase system, EIIC CSC00_0277 PF00367 phosphotransferase system, EIIB CSC00_0278 PF01026 TatD related DNase CSC00_0279 PF09115 DNA polymerase III, delta subunit, C terminal CSC00_0280 PF02223 Thymidylate kinase CSC00_0281 PF02618 YceG-like family CSC00_0282 PF01063 Amino-transferase class IV CSC00_0283 PF00109 Beta-ketoacyl synthase, N-terminal domain CSC00_0283 PF02801 Beta-ketoacyl synthase, C-terminal domain CSC00_0284 PF00550 Phosphopantetheine attachment site CSC00_0286 PF00698 Acyl transferase domain CSC00_0287 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CSC00_0287 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CSC00_0288 PF02504 Fatty acid synthesis protein CSC00_0289 PF01783 Ribosomal L32p protein family CSC00_0290 PF02620 Large ribosomal RNA subunit accumulation protein YceD CSC00_0291 PF02545 Maf-like protein CSC00_0292 PF01479 S4 domain CSC00_0292 PF00849 RNA pseudouridylate synthase CSC00_0293 PF10150 Ribonuclease E/G family CSC00_0293 PF12111 Polyribonucleotide phosphorylase C terminal CSC00_0293 PF00575 S1 RNA binding domain CSC00_0294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0294 PF03466 LysR substrate binding domain CSC00_0295 PF07690 Major Facilitator Superfamily CSC00_0296 PF03023 Lipid II flippase MurJ CSC00_0297 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_0298 PF04337 Protein of unknown function, DUF480 CSC00_0299 PF13302 Acetyltransferase (GNAT) domain CSC00_0300 PF07690 Major Facilitator Superfamily CSC00_0301 PF07273 Protein of unknown function (DUF1439) CSC00_0303 PF01979 Amidohydrolase family CSC00_0304 PF06183 DinI-like family CSC00_0305 PF13991 BssS protein family CSC00_0306 PF01266 FAD dependent oxidoreductase CSC00_0307 PF10968 Protein of unknown function (DUF2770) CSC00_0310 PF03279 Bacterial lipid A biosynthesis acyltransferase CSC00_0311 PF07690 Major Facilitator Superfamily CSC00_0312 PF13984 MsyB protein CSC00_0313 PF07119 Protein of unknown function (DUF1375) CSC00_0314 PF00535 Glycosyl transferase family 2 CSC00_0315 PF04349 Periplasmic glucan biosynthesis protein, MdoG CSC00_0316 PF01757 Acyltransferase family CSC00_0317 PF13977 BetI-type transcriptional repressor, C-terminal CSC00_0317 PF00440 Bacterial regulatory proteins, tetR family CSC00_0318 PF01661 Macro domain CSC00_0319 PF06496 Protein of unknown function (DUF1097) CSC00_0320 PF02613 Nitrate reductase delta subunit CSC00_0321 PF02811 PHP domain CSC00_0322 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_0324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0324 PF03466 LysR substrate binding domain CSC00_0325 PF02678 Pirin CSC00_0325 PF05726 Pirin C-terminal cupin domain CSC00_0326 PF00857 Isochorismatase family CSC00_0328 PF01323 DSBA-like thioredoxin domain CSC00_0329 PF02562 PhoH-like protein CSC00_0330 PF04261 Dyp-type peroxidase family CSC00_0331 PF09375 Imelysin CSC00_0331 PF13473 Cupredoxin-like domain CSC00_0332 PF03239 Iron permease FTR1 family CSC00_0333 PF07670 Nucleoside recognition CSC00_0333 PF01773 Na+ dependent nucleoside transporter N-terminus CSC00_0333 PF07662 Na+ dependent nucleoside transporter C-terminus CSC00_0335 PF00474 Sodium:solute symporter family CSC00_0336 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CSC00_0336 PF14850 DNA-binding domain of Proline dehydrogenase CSC00_0336 PF01619 Proline dehydrogenase CSC00_0336 PF00171 Aldehyde dehydrogenase family CSC00_0338 PF00440 Bacterial regulatory proteins, tetR family CSC00_0338 PF08362 YcdC-like protein, C-terminal region CSC00_0339 PF00296 Luciferase-like monooxygenase CSC00_0340 PF00857 Isochorismatase family CSC00_0341 PF01042 Endoribonuclease L-PSP CSC00_0342 PF00561 alpha/beta hydrolase fold CSC00_0343 PF00881 Nitroreductase family CSC00_0344 PF01613 Flavin reductase like domain CSC00_0345 PF00860 Permease family CSC00_0348 PF03358 NADPH-dependent FMN reductase CSC00_0349 PF13993 YccJ-like protein CSC00_0350 PF00328 Histidine phosphatase superfamily (branch 2) CSC00_0351 PF01638 HxlR-like helix-turn-helix CSC00_0355 PF00324 Amino acid permease CSC00_0356 PF00120 Glutamine synthetase, catalytic domain CSC00_0357 PF07722 Peptidase C26 CSC00_0358 PF07883 Cupin domain CSC00_0358 PF01381 Helix-turn-helix CSC00_0359 PF00171 Aldehyde dehydrogenase family CSC00_0360 PF01266 FAD dependent oxidoreductase CSC00_0361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0361 PF03466 LysR substrate binding domain CSC00_0362 PF00180 Isocitrate/isopropylmalate dehydrogenase CSC00_0363 PF02028 BCCT, betaine/carnitine/choline family transporter CSC00_0364 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CSC00_0364 PF00355 Rieske [2Fe-2S] domain CSC00_0365 PF00171 Aldehyde dehydrogenase family CSC00_0366 PF00970 Oxidoreductase FAD-binding domain CSC00_0366 PF00175 Oxidoreductase NAD-binding domain CSC00_0366 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_0368 PF00563 EAL domain CSC00_0368 PF12792 CSS motif domain associated with EAL CSC00_0369 PF00563 EAL domain CSC00_0369 PF12792 CSS motif domain associated with EAL CSC00_0372 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_0373 PF01027 Inhibitor of apoptosis-promoting Bax1 CSC00_0374 PF04358 DsrC like protein CSC00_0375 PF00708 Acylphosphatase CSC00_0376 PF12833 Helix-turn-helix domain CSC00_0377 PF01161 Phosphatidylethanolamine-binding protein CSC00_0378 PF17785 PUA-like domain CSC00_0378 PF10672 S-adenosylmethionine-dependent methyltransferase CSC00_0379 PF08755 Hemimethylated DNA-binding protein YccV like CSC00_0380 PF13380 CoA binding domain CSC00_0381 PF02142 MGS-like domain CSC00_0382 PF13361 UvrD-like helicase C-terminal domain CSC00_0382 PF00580 UvrD/REP helicase N-terminal domain CSC00_0382 PF12462 DNA helicase IV / RNA helicase N terminal CSC00_0383 PF03733 Inner membrane component domain CSC00_0384 PF12805 FUSC-like inner membrane protein yccS CSC00_0385 PF04994 TfoX C-terminal domain CSC00_0385 PF04993 TfoX N-terminal domain CSC00_0387 PF03846 Cell division inhibitor SulA CSC00_0388 PF01389 OmpA-like transmembrane domain CSC00_0388 PF00691 OmpA family CSC00_0389 PF17414 MatP C-terminal ribbon-helix-helix domain CSC00_0389 PF06303 MatP N-terminal domain CSC00_0390 PF13654 AAA domain CSC00_0390 PF05362 Lon protease (S16) C-terminal proteolytic domain CSC00_0391 PF07977 FabA-like domain CSC00_0393 PF03886 ABC-type transport auxiliary lipoprotein component CSC00_0394 PF02470 MlaD protein CSC00_0395 PF04403 Paraquat-inducible protein A CSC00_0396 PF00005 ABC transporter CSC00_0396 PF16326 ABC transporter C-terminal domain CSC00_0396 PF12848 ABC transporter CSC00_0397 PF10672 S-adenosylmethionine-dependent methyltransferase CSC00_0397 PF01170 Putative RNA methylase family UPF0020 CSC00_0397 PF02926 THUMP domain CSC00_0398 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_0398 PF03473 MOSC domain CSC00_0398 PF03476 MOSC N-terminal beta barrel domain CSC00_0399 PF07126 Cell-division protein ZapC CSC00_0400 PF01180 Dihydroorotate dehydrogenase CSC00_0401 PF03358 NADPH-dependent FMN reductase CSC00_0402 PF09084 NMT1/THI5 like CSC00_0403 PF00296 Luciferase-like monooxygenase CSC00_0404 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0405 PF00005 ABC transporter CSC00_0406 PF01433 Peptidase family M1 domain CSC00_0406 PF11940 Domain of unknown function (DUF3458) Ig-like fold CSC00_0406 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CSC00_0407 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CSC00_0407 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CSC00_0408 PF07687 Peptidase dimerisation domain CSC00_0408 PF01546 Peptidase family M20/M25/M40 CSC00_0409 PF07687 Peptidase dimerisation domain CSC00_0409 PF01546 Peptidase family M20/M25/M40 CSC00_0411 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_0412 PF01037 Lrp/AsnC ligand binding domain CSC00_0413 PF01336 OB-fold nucleic acid binding domain CSC00_0413 PF00152 tRNA synthetases class II (D, K and N) CSC00_0414 PF00267 Gram-negative porin CSC00_0415 PF00155 Aminotransferase class I and II CSC00_0416 PF00753 Metallo-beta-lactamase superfamily CSC00_0417 PF05951 Bacterial protein of unknown function (DUF882) CSC00_0418 PF03734 L,D-transpeptidase catalytic domain CSC00_0418 PF01471 Putative peptidoglycan binding domain CSC00_0420 PF16330 MukB hinge domain CSC00_0420 PF04310 MukB N-terminal CSC00_0421 PF04288 MukE-like family CSC00_0422 PF17193 MukF C-terminal domain CSC00_0422 PF03882 MukF winged-helix domain CSC00_0422 PF17192 MukF middle domain CSC00_0424 PF01636 Phosphotransferase enzyme family CSC00_0425 PF02348 Cytidylyltransferase CSC00_0426 PF03966 Trm112p-like protein CSC00_0427 PF06224 Winged helix DNA-binding domain CSC00_0428 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CSC00_0429 PF00005 ABC transporter CSC00_0429 PF00664 ABC transporter transmembrane region CSC00_0430 PF00753 Metallo-beta-lactamase superfamily CSC00_0430 PF03772 Competence protein CSC00_0431 PF00216 Bacterial DNA-binding protein CSC00_0432 PF00575 S1 RNA binding domain CSC00_0433 PF02224 Cytidylate kinase CSC00_0434 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CSC00_0435 PF00266 Aminotransferase class-V CSC00_0436 PF04239 Protein of unknown function (DUF421) CSC00_0437 PF18381 YcaO cyclodehydratase C-terminal domain CSC00_0437 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CSC00_0438 PF01226 Formate/nitrite transporter CSC00_0439 PF01228 Glycine radical CSC00_0439 PF02901 Pyruvate formate lyase-like CSC00_0440 PF04055 Radical SAM superfamily CSC00_0441 PF07690 Major Facilitator Superfamily CSC00_0443 PF04976 DMSO reductase anchor subunit (DmsC) CSC00_0444 PF13247 4Fe-4S dicluster domain CSC00_0444 PF12800 4Fe-4S binding domain CSC00_0445 PF01568 Molydopterin dinucleotide binding domain CSC00_0445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_0445 PF00384 Molybdopterin oxidoreductase CSC00_0446 PF02403 Seryl-tRNA synthetase N-terminal domain CSC00_0446 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSC00_0447 PF16193 AAA C-terminal domain CSC00_0447 PF12002 MgsA AAA+ ATPase C terminal CSC00_0447 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_0448 PF03548 Outer membrane lipoprotein carrier protein LolA CSC00_0449 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CSC00_0449 PF01580 FtsK/SpoIIIE family CSC00_0449 PF09397 Ftsk gamma domain CSC00_0449 PF17854 FtsK alpha domain CSC00_0450 PF01037 Lrp/AsnC ligand binding domain CSC00_0452 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_0453 PF00664 ABC transporter transmembrane region CSC00_0453 PF00005 ABC transporter CSC00_0454 PF00664 ABC transporter transmembrane region CSC00_0454 PF00005 ABC transporter CSC00_0455 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CSC00_0456 PF01176 Translation initiation factor 1A / IF-1 CSC00_0457 PF07724 AAA domain (Cdc48 subfamily) CSC00_0457 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_0457 PF17871 AAA lid domain CSC00_0457 PF10431 C-terminal, D2-small domain, of ClpB protein CSC00_0457 PF02861 Clp amino terminal domain, pathogenicity island component CSC00_0458 PF02617 ATP-dependent Clp protease adaptor protein ClpS CSC00_0459 PF00313 'Cold-shock' DNA-binding domain CSC00_0460 PF12704 MacB-like periplasmic core domain CSC00_0460 PF00005 ABC transporter CSC00_0460 PF02687 FtsX-like permease family CSC00_0461 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_0462 PF11398 Protein of unknown function (DUF2813) CSC00_0464 PF00230 Major intrinsic protein CSC00_0466 PF03956 Lysine exporter LysO CSC00_0467 PF03063 Prismane/CO dehydrogenase family CSC00_0468 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_0468 PF00175 Oxidoreductase NAD-binding domain CSC00_0468 PF00970 Oxidoreductase FAD-binding domain CSC00_0470 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_0470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_0470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_0471 PF01212 Beta-eliminating lyase CSC00_0472 PF11066 Protein of unknown function (DUF2867) CSC00_0472 PF13460 NAD(P)H-binding CSC00_0473 PF01370 NAD dependent epimerase/dehydratase family CSC00_0474 PF01510 N-acetylmuramoyl-L-alanine amidase CSC00_0475 PF00563 EAL domain CSC00_0475 PF00360 Phytochrome region CSC00_0475 PF00990 Diguanylate cyclase, GGDEF domain CSC00_0475 PF01590 GAF domain CSC00_0476 PF12883 Protein of unknown function (DUF3828) CSC00_0477 PF00005 ABC transporter CSC00_0478 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_0479 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0480 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0481 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_0482 PF00512 His Kinase A (phospho-acceptor) domain CSC00_0482 PF00989 PAS fold CSC00_0482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_0482 PF16736 Single Cache-like CSC00_0483 PF00486 Transcriptional regulatory protein, C terminal CSC00_0483 PF00072 Response regulator receiver domain CSC00_0484 PF05958 tRNA (Uracil-5-)-methyltransferase CSC00_0485 PF10767 Protein of unknown function (DUF2593) CSC00_0486 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0487 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0488 PF00005 ABC transporter CSC00_0488 PF08402 TOBE domain CSC00_0489 PF13416 Bacterial extracellular solute-binding protein CSC00_0490 PF10722 Putative bacterial sensory transduction regulator CSC00_0491 PF18030 RimK PreATP-grasp domain CSC00_0491 PF08443 RimK-like ATP-grasp domain CSC00_0492 PF00881 Nitroreductase family CSC00_0493 PF00881 Nitroreductase family CSC00_0494 PF07214 Protein of unknown function (DUF1418) CSC00_0495 PF00462 Glutaredoxin CSC00_0496 PF11045 Putative inner membrane protein of Enterobacteriaceae CSC00_0497 PF02080 TrkA-C domain CSC00_0497 PF06826 Predicted Permease Membrane Region CSC00_0499 PF00440 Bacterial regulatory proteins, tetR family CSC00_0500 PF07690 Major Facilitator Superfamily CSC00_0502 PF07690 Major Facilitator Superfamily CSC00_0503 PF01569 PAP2 superfamily CSC00_0504 PF08220 DeoR-like helix-turn-helix domain CSC00_0504 PF00455 DeoR C terminal sensor domain CSC00_0505 PF00768 D-alanyl-D-alanine carboxypeptidase CSC00_0505 PF07943 Penicillin-binding protein 5, C-terminal domain CSC00_0507 PF00043 Glutathione S-transferase, C-terminal domain CSC00_0507 PF13417 Glutathione S-transferase, N-terminal domain CSC00_0508 PF07995 Glucose / Sorbosone dehydrogenase CSC00_0509 PF10799 Biofilm formation protein (YliH/bssR) CSC00_0511 PF01306 LacY proton/sugar symporter CSC00_0512 PF00919 Uncharacterized protein family UPF0004 CSC00_0512 PF18693 TRAM domain CSC00_0512 PF04055 Radical SAM superfamily CSC00_0513 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0513 PF12911 N-terminal TM domain of oligopeptide transport permease C CSC00_0514 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_0516 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_0516 PF00005 ABC transporter CSC00_0517 PF01112 Asparaginase CSC00_0518 PF03454 MoeA C-terminal region (domain IV) CSC00_0518 PF00994 Probable molybdopterin binding domain CSC00_0518 PF03453 MoeA N-terminal region (domain I and II) CSC00_0519 PF00899 ThiF family CSC00_0520 PF04055 Radical SAM superfamily CSC00_0523 PF07350 Protein of unknown function (DUF1479) CSC00_0524 PF00356 Bacterial regulatory proteins, lacI family CSC00_0525 PF07690 Major Facilitator Superfamily CSC00_0526 PF17137 Domain of unknown function (DUF5110) CSC00_0526 PF13802 Galactose mutarotase-like CSC00_0526 PF01055 Glycosyl hydrolases family 31 CSC00_0526 PF16338 Domain of unknown function (DUF4968) CSC00_0527 PF00005 ABC transporter CSC00_0527 PF12848 ABC transporter CSC00_0528 PF13350 Tyrosine phosphatase family CSC00_0529 PF03734 L,D-transpeptidase catalytic domain CSC00_0529 PF17969 L,D-transpeptidase C-terminal domain CSC00_0530 PF07702 UTRA domain CSC00_0530 PF00392 Bacterial regulatory proteins, gntR family CSC00_0531 PF00232 Glycosyl hydrolase family 1 CSC00_0532 PF03600 Citrate transporter CSC00_0533 PF01325 Iron dependent repressor, N-terminal DNA binding domain CSC00_0533 PF02742 Iron dependent repressor, metal binding and dimerisation domain CSC00_0535 PF00884 Sulfatase CSC00_0536 PF13505 Outer membrane protein beta-barrel domain CSC00_0538 PF00892 EamA-like transporter family CSC00_0539 PF00210 Ferritin-like domain CSC00_0540 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_0541 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0542 PF00005 ABC transporter CSC00_0543 PF00924 Mechanosensitive ion channel CSC00_0544 PF05971 RNA methyltransferase CSC00_0545 PF01613 Flavin reductase like domain CSC00_0547 PF01258 Prokaryotic dksA/traR C4-type zinc finger CSC00_0548 PF07338 Protein of unknown function (DUF1471) CSC00_0549 PF02885 Glycosyl transferase family, helical bundle domain CSC00_0550 PF13307 Helicase C-terminal domain CSC00_0550 PF06733 DEAD_2 CSC00_0550 PF00270 DEAD/DEAH box helicase CSC00_0551 PF00270 DEAD/DEAH box helicase CSC00_0551 PF00271 Helicase conserved C-terminal domain CSC00_0552 PF02780 Transketolase, C-terminal domain CSC00_0552 PF02779 Transketolase, pyrimidine binding domain CSC00_0553 PF00456 Transketolase, thiamine diphosphate binding domain CSC00_0555 PF07690 Major Facilitator Superfamily CSC00_0557 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0557 PF03466 LysR substrate binding domain CSC00_0558 PF00440 Bacterial regulatory proteins, tetR family CSC00_0558 PF09209 Tetracyclin repressor-like, C-terminal domain CSC00_0559 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_0560 PF00005 ABC transporter CSC00_0563 PF11076 Putative inner membrane protein YbhQ CSC00_0564 PF03372 Endonuclease/Exonuclease/phosphatase family CSC00_0565 PF13091 PLD-like domain CSC00_0566 PF03706 Lysylphosphatidylglycerol synthase TM region CSC00_0567 PF01027 Inhibitor of apoptosis-promoting Bax1 CSC00_0568 PF02391 MoaE protein CSC00_0569 PF02597 ThiS family CSC00_0570 PF01967 MoaC family CSC00_0571 PF00994 Probable molybdopterin binding domain CSC00_0572 PF06463 Molybdenum Cofactor Synthesis C CSC00_0572 PF04055 Radical SAM superfamily CSC00_0573 PF01933 Uncharacterised protein family UPF0052 CSC00_0574 PF00884 Sulfatase CSC00_0574 PF08019 Phosphoethanolamine transferase EptA/EptB CSC00_0575 PF00486 Transcriptional regulatory protein, C terminal CSC00_0575 PF00072 Response regulator receiver domain CSC00_0576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_0576 PF00512 His Kinase A (phospho-acceptor) domain CSC00_0577 PF02151 UvrB/uvrC motif CSC00_0577 PF00271 Helicase conserved C-terminal domain CSC00_0577 PF17757 UvrB interaction domain CSC00_0577 PF04851 Type III restriction enzyme, res subunit CSC00_0577 PF12344 Ultra-violet resistance protein B CSC00_0580 PF08241 Methyltransferase domain CSC00_0581 PF00155 Aminotransferase class I and II CSC00_0582 PF04055 Radical SAM superfamily CSC00_0582 PF06968 Biotin and Thiamin Synthesis associated domain CSC00_0583 PF00202 Aminotransferase class-III CSC00_0584 PF01161 Phosphatidylethanolamine-binding protein CSC00_0586 PF00324 Amino acid permease CSC00_0587 PF00221 Aromatic amino acid lyase CSC00_0588 PF01175 Urocanase Rossmann-like domain CSC00_0588 PF17391 Urocanase N-terminal domain CSC00_0588 PF17392 Urocanase C-terminal domain CSC00_0589 PF07702 UTRA domain CSC00_0589 PF00392 Bacterial regulatory proteins, gntR family CSC00_0590 PF00491 Arginase family CSC00_0591 PF01979 Amidohydrolase family CSC00_0592 PF01095 Pectinesterase CSC00_0598 PF13411 MerR HTH family regulatory protein CSC00_0599 PF00563 EAL domain CSC00_0599 PF04940 Sensors of blue-light using FAD CSC00_0600 PF10798 Biofilm development protein YmgB/AriR CSC00_0602 PF10798 Biofilm development protein YmgB/AriR CSC00_0603 PF10282 Lactonase, 7-bladed beta-propeller CSC00_0605 PF00005 ABC transporter CSC00_0605 PF03459 TOBE domain CSC00_0606 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0608 PF10766 Multidrug efflux pump-associated protein AcrZ CSC00_0609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0609 PF03459 TOBE domain CSC00_0610 PF00005 ABC transporter CSC00_0612 PF16363 GDP-mannose 4,6 dehydratase CSC00_0613 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CSC00_0613 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CSC00_0614 PF08544 GHMP kinases C terminal CSC00_0614 PF10509 Galactokinase galactose-binding signature CSC00_0614 PF00288 GHMP kinases N terminal domain CSC00_0615 PF01263 Aldose 1-epimerase CSC00_0616 PF00300 Histidine phosphatase superfamily (branch 1) CSC00_0617 PF00793 DAHP synthetase I family CSC00_0618 PF13985 YbgS-like protein CSC00_0619 PF01545 Cation efflux family CSC00_0620 PF04973 Nicotinamide mononucleotide transporter CSC00_0621 PF02445 Quinolinate synthetase A protein CSC00_0630 PF16331 TolA binding protein trimerisation CSC00_0630 PF13174 Tetratricopeptide repeat CSC00_0631 PF00691 OmpA family CSC00_0632 PF07676 WD40-like Beta Propeller Repeat CSC00_0632 PF04052 TolB amino-terminal domain CSC00_0633 PF06519 TolA C-terminal CSC00_0634 PF02472 Biopolymer transport protein ExbD/TolR CSC00_0635 PF01618 MotA/TolQ/ExbB proton channel family CSC00_0636 PF03061 Thioesterase superfamily CSC00_0637 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CSC00_0638 PF08173 Membrane bound YbgT-like protein CSC00_0639 PF02322 Cytochrome bd terminal oxidase subunit II CSC00_0640 PF01654 Cytochrome bd terminal oxidase subunit I CSC00_0643 PF02629 CoA binding domain CSC00_0643 PF00549 CoA-ligase CSC00_0644 PF08442 ATP-grasp domain CSC00_0644 PF00549 CoA-ligase CSC00_0645 PF02817 e3 binding domain CSC00_0645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSC00_0645 PF00364 Biotin-requiring enzyme CSC00_0646 PF16078 2-oxoglutarate dehydrogenase N-terminus CSC00_0646 PF00676 Dehydrogenase E1 component CSC00_0646 PF16870 2-oxoglutarate dehydrogenase C-terminal CSC00_0646 PF02779 Transketolase, pyrimidine binding domain CSC00_0647 PF13085 2Fe-2S iron-sulfur cluster binding domain CSC00_0648 PF00890 FAD binding domain CSC00_0648 PF02910 Fumarate reductase flavoprotein C-term CSC00_0650 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CSC00_0651 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CSC00_0652 PF00285 Citrate synthase, C-terminal domain CSC00_0654 PF06827 Zinc finger found in FPG and IleRS CSC00_0654 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CSC00_0654 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CSC00_0655 PF01470 Pyroglutamyl peptidase CSC00_0658 PF03746 LamB/YcsF family CSC00_0659 PF02626 Carboxyltransferase domain, subdomain A and B CSC00_0660 PF02682 Carboxyltransferase domain, subdomain C and D CSC00_0661 PF01784 NIF3 (NGG1p interacting factor 3) CSC00_0662 PF00854 POT family CSC00_0663 PF03441 FAD binding domain of DNA photolyase CSC00_0663 PF00875 DNA photolyase CSC00_0664 PF10725 Protein of unknown function (DUF2517) CSC00_0665 PF03814 Potassium-transporting ATPase A subunit CSC00_0667 PF02669 K+-transporting ATPase, c chain CSC00_0668 PF02702 Osmosensitive K+ channel His kinase sensor domain CSC00_0668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_0668 PF13492 GAF domain CSC00_0668 PF00512 His Kinase A (phospho-acceptor) domain CSC00_0668 PF13493 Domain of unknown function (DUF4118) CSC00_0669 PF00072 Response regulator receiver domain CSC00_0669 PF00486 Transcriptional regulatory protein, C terminal CSC00_0671 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSC00_0671 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSC00_0671 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSC00_0671 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSC00_0672 PF03925 SeqA protein C-terminal domain CSC00_0672 PF17206 SeqA protein N-terminal domain CSC00_0673 PF12697 Alpha/beta hydrolase family CSC00_0674 PF01402 Ribbon-helix-helix protein, copG family CSC00_0675 PF00258 Flavodoxin CSC00_0676 PF01475 Ferric uptake regulator family CSC00_0677 PF13982 YbfN-like lipoprotein CSC00_0678 PF03573 outer membrane porin, OprD family CSC00_0680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CSC00_0680 PF00749 tRNA synthetases class I (E and Q), catalytic domain CSC00_0681 PF02378 Phosphotransferase system, EIIC CSC00_0681 PF00367 phosphotransferase system, EIIB CSC00_0681 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSC00_0682 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CSC00_0683 PF01979 Amidohydrolase family CSC00_0684 PF00480 ROK family CSC00_0684 PF01047 MarR family CSC00_0685 PF13344 Haloacid dehalogenase-like hydrolase CSC00_0686 PF13537 Glutamine amidotransferase domain CSC00_0686 PF00733 Asparagine synthase CSC00_0694 PF01494 FAD binding domain CSC00_0695 PF01938 TRAM domain CSC00_0695 PF04055 Radical SAM superfamily CSC00_0695 PF00919 Uncharacterized protein family UPF0004 CSC00_0696 PF02562 PhoH-like protein CSC00_0697 PF02130 Uncharacterized protein family UPF0054 CSC00_0698 PF03471 Transporter associated domain CSC00_0698 PF00571 CBS domain CSC00_0699 PF00795 Carbon-nitrogen hydrolase CSC00_0700 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_0701 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0702 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0703 PF00005 ABC transporter CSC00_0705 PF17287 POTRA domain CSC00_0705 PF08479 POTRA domain, ShlB-type CSC00_0705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CSC00_0706 PF13332 Hemagglutinin repeat CSC00_0706 PF14436 Bacterial EndoU nuclease CSC00_0706 PF05594 Haemagluttinin repeat CSC00_0706 PF05860 haemagglutination activity domain CSC00_0706 PF04829 Pre-toxin domain with VENN motif CSC00_0707 PF07295 Zinc-ribbon containing domain CSC00_0708 PF08264 Anticodon-binding domain of tRNA CSC00_0708 PF00133 tRNA synthetases class I (I, L, M and V) CSC00_0708 PF13603 Leucyl-tRNA synthetase, Domain 2 CSC00_0709 PF04390 Lipopolysaccharide-assembly CSC00_0710 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CSC00_0710 PF06144 DNA polymerase III, delta subunit CSC00_0711 PF01467 Cytidylyltransferase-like CSC00_0712 PF00300 Histidine phosphatase superfamily (branch 1) CSC00_0714 PF02590 Predicted SPOUT methyltransferase CSC00_0715 PF00905 Penicillin binding protein transpeptidase domain CSC00_0715 PF03717 Penicillin-binding Protein dimerisation domain CSC00_0716 PF01098 Cell cycle protein CSC00_0717 PF05036 Sporulation related domain CSC00_0717 PF03330 Lytic transglycolase CSC00_0718 PF07943 Penicillin-binding protein 5, C-terminal domain CSC00_0718 PF00768 D-alanyl-D-alanine carboxypeptidase CSC00_0719 PF04359 Protein of unknown function (DUF493) CSC00_0720 PF03099 Biotin/lipoate A/B protein ligase family CSC00_0721 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0721 PF03466 LysR substrate binding domain CSC00_0722 PF04055 Radical SAM superfamily CSC00_0722 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CSC00_0723 PF02416 mttA/Hcf106 family CSC00_0724 PF00795 Carbon-nitrogen hydrolase CSC00_0725 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CSC00_0726 PF00313 'Cold-shock' DNA-binding domain CSC00_0727 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CSC00_0729 PF03606 C4-dicarboxylate anaerobic carrier CSC00_0730 PF00445 Ribonuclease T2 family CSC00_0731 PF01272 Transcription elongation factor, GreA/GreB, C-term CSC00_0731 PF14760 Rnk N-terminus CSC00_0732 PF00582 Universal stress protein family CSC00_0733 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_0733 PF13192 Thioredoxin domain CSC00_0734 PF00578 AhpC/TSA family CSC00_0734 PF10417 C-terminal domain of 1-Cys peroxiredoxin CSC00_0735 PF13098 Thioredoxin-like domain CSC00_0736 PF03466 LysR substrate binding domain CSC00_0736 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0737 PF11922 Domain of unknown function (DUF3440) CSC00_0737 PF01507 Phosphoadenosine phosphosulfate reductase family CSC00_0738 PF02195 ParB-like nuclease domain CSC00_0739 PF00155 Aminotransferase class I and II CSC00_0741 PF03079 ARD/ARD' family CSC00_0742 PF01568 Molydopterin dinucleotide binding domain CSC00_0742 PF00384 Molybdopterin oxidoreductase CSC00_0744 PF00005 ABC transporter CSC00_0745 PF02653 Branched-chain amino acid transport system / permease component CSC00_0746 PF02653 Branched-chain amino acid transport system / permease component CSC00_0748 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSC00_0748 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_0749 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_0749 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_0750 PF00596 Class II Aldolase and Adducin N-terminal domain CSC00_0751 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CSC00_0753 PF07969 Amidohydrolase family CSC00_0754 PF00356 Bacterial regulatory proteins, lacI family CSC00_0755 PF00459 Inositol monophosphatase family CSC00_0756 PF07690 Major Facilitator Superfamily CSC00_0757 PF00328 Histidine phosphatase superfamily (branch 2) CSC00_0758 PF01008 Initiation factor 2 subunit family CSC00_0759 PF01636 Phosphotransferase enzyme family CSC00_0762 PF02653 Branched-chain amino acid transport system / permease component CSC00_0763 PF00005 ABC transporter CSC00_0765 PF00465 Iron-containing alcohol dehydrogenase CSC00_0769 PF04328 Selenoprotein, putative CSC00_0770 PF13722 5TM C-terminal transporter carbon starvation CstA CSC00_0770 PF02554 Carbon starvation protein CstA CSC00_0771 PF03061 Thioesterase superfamily CSC00_0773 PF00550 Phosphopantetheine attachment site CSC00_0773 PF00857 Isochorismatase family CSC00_0774 PF13193 AMP-binding enzyme C-terminal domain CSC00_0774 PF00501 AMP-binding enzyme CSC00_0775 PF00425 chorismate binding enzyme CSC00_0776 PF01497 Periplasmic binding protein CSC00_0777 PF05977 Transmembrane secretion effector CSC00_0778 PF01032 FecCD transport family CSC00_0779 PF01032 FecCD transport family CSC00_0780 PF00005 ABC transporter CSC00_0781 PF13193 AMP-binding enzyme C-terminal domain CSC00_0781 PF00668 Condensation domain CSC00_0781 PF00501 AMP-binding enzyme CSC00_0781 PF00975 Thioesterase domain CSC00_0781 PF00550 Phosphopantetheine attachment site CSC00_0782 PF03621 MbtH-like protein CSC00_0783 PF11806 Domain of unknown function (DUF3327) CSC00_0783 PF00756 Putative esterase CSC00_0784 PF07715 TonB-dependent Receptor Plug Domain CSC00_0784 PF00593 TonB dependent receptor CSC00_0785 PF01648 4'-phosphopantetheinyl transferase superfamily CSC00_0785 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CSC00_0786 PF02779 Transketolase, pyrimidine binding domain CSC00_0786 PF02780 Transketolase, C-terminal domain CSC00_0787 PF00456 Transketolase, thiamine diphosphate binding domain CSC00_0788 PF04198 Putative sugar-binding domain CSC00_0788 PF00325 Bacterial regulatory proteins, crp family CSC00_0789 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_0789 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_0790 PF13407 Periplasmic binding protein domain CSC00_0792 PF00005 ABC transporter CSC00_0793 PF02653 Branched-chain amino acid transport system / permease component CSC00_0798 PF03466 LysR substrate binding domain CSC00_0798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_0799 PF00924 Mechanosensitive ion channel CSC00_0801 PF02028 BCCT, betaine/carnitine/choline family transporter CSC00_0802 PF13977 BetI-type transcriptional repressor, C-terminal CSC00_0802 PF00440 Bacterial regulatory proteins, tetR family CSC00_0803 PF00171 Aldehyde dehydrogenase family CSC00_0804 PF00732 GMC oxidoreductase CSC00_0804 PF05199 GMC oxidoreductase CSC00_0806 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_0807 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0808 PF12911 N-terminal TM domain of oligopeptide transport permease C CSC00_0808 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0809 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_0809 PF00005 ABC transporter CSC00_0810 PF00005 ABC transporter CSC00_0810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_0812 PF00202 Aminotransferase class-III CSC00_0813 PF00106 short chain dehydrogenase CSC00_0814 PF00005 ABC transporter CSC00_0815 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0816 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0817 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_0817 PF01464 Transglycosylase SLT domain CSC00_0818 PF00392 Bacterial regulatory proteins, gntR family CSC00_0818 PF00155 Aminotransferase class I and II CSC00_0819 PF00155 Aminotransferase class I and II CSC00_0820 PF00892 EamA-like transporter family CSC00_0821 PF04107 Glutamate-cysteine ligase family 2(GCS2) CSC00_0822 PF09992 Phosphodiester glycosidase CSC00_0823 PF13333 Integrase core domain CSC00_0823 PF00665 Integrase core domain CSC00_0823 PF13276 HTH-like domain CSC00_0825 PF00873 AcrB/AcrD/AcrF family CSC00_0826 PF13533 Biotin-lipoyl like CSC00_0827 PF00689 Cation transporting ATPase, C-terminus CSC00_0827 PF00690 Cation transporter/ATPase, N-terminus CSC00_0829 PF06643 Protein of unknown function (DUF1158) CSC00_0830 PF12833 Helix-turn-helix domain CSC00_0831 PF12706 Beta-lactamase superfamily domain CSC00_0832 PF00440 Bacterial regulatory proteins, tetR family CSC00_0833 PF04237 YjbR CSC00_0834 PF00881 Nitroreductase family CSC00_0836 PF03830 PTS system sorbose subfamily IIB component CSC00_0838 PF03613 PTS system mannose/fructose/sorbose family IID component CSC00_0839 PF01380 SIS domain CSC00_0840 PF01380 SIS domain CSC00_0841 PF00158 Sigma-54 interaction domain CSC00_0841 PF00874 PRD domain CSC00_0841 PF03610 PTS system fructose IIA component CSC00_0844 PF07690 Major Facilitator Superfamily CSC00_0845 PF00924 Mechanosensitive ion channel CSC00_0846 PF00356 Bacterial regulatory proteins, lacI family CSC00_0850 PF16449 Fimbrillin MatB CSC00_0851 PF18649 EcpB C-terminal domain CSC00_0852 PF15976 CS1-pili formation C-terminal CSC00_0852 PF16967 E-set like domain CSC00_0855 PF00196 Bacterial regulatory proteins, luxR family CSC00_0858 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_0858 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_0860 PF03825 Nucleoside H+ symporter CSC00_0861 PF00324 Amino acid permease CSC00_0862 PF07715 TonB-dependent Receptor Plug Domain CSC00_0862 PF00593 TonB dependent receptor CSC00_0864 PF00171 Aldehyde dehydrogenase family CSC00_0865 PF01266 FAD dependent oxidoreductase CSC00_0867 PF13520 Amino acid permease CSC00_0869 PF00850 Histone deacetylase domain CSC00_0871 PF00196 Bacterial regulatory proteins, luxR family CSC00_0872 PF04055 Radical SAM superfamily CSC00_0873 PF00884 Sulfatase CSC00_0875 PF17409 MoaF C-terminal domain CSC00_0875 PF10703 MoaF N-terminal domain CSC00_0876 PF00248 Aldo/keto reductase family CSC00_0877 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_0878 PF07687 Peptidase dimerisation domain CSC00_0878 PF01546 Peptidase family M20/M25/M40 CSC00_0885 PF01032 FecCD transport family CSC00_0886 PF00005 ABC transporter CSC00_0887 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_0887 PF00529 HlyD membrane-fusion protein of T1SS CSC00_0888 PF11742 Protein of unknown function (DUF3302) CSC00_0891 PF00294 pfkB family carbohydrate kinase CSC00_0892 PF02264 LamB porin CSC00_0892 PF11471 Maltoporin periplasmic N-terminal extension CSC00_0893 PF00367 phosphotransferase system, EIIB CSC00_0893 PF02378 Phosphotransferase system, EIIC CSC00_0894 PF08244 Glycosyl hydrolases family 32 C terminal CSC00_0894 PF00251 Glycosyl hydrolases family 32 N-terminal domain CSC00_0895 PF13407 Periplasmic binding protein domain CSC00_0895 PF00356 Bacterial regulatory proteins, lacI family CSC00_0898 PF02653 Branched-chain amino acid transport system / permease component CSC00_0899 PF00005 ABC transporter CSC00_0900 PF13407 Periplasmic binding protein domain CSC00_0901 PF00356 Bacterial regulatory proteins, lacI family CSC00_0902 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_0902 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_0903 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_0903 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_0904 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_0904 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_0905 PF01261 Xylose isomerase-like TIM barrel CSC00_0907 PF00152 tRNA synthetases class II (D, K and N) CSC00_0907 PF01336 OB-fold nucleic acid binding domain CSC00_0908 PF00854 POT family CSC00_0909 PF01276 Orn/Lys/Arg decarboxylase, major domain CSC00_0909 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CSC00_0909 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CSC00_0910 PF13520 Amino acid permease CSC00_0911 PF18500 CadC C-terminal domain 1 CSC00_0911 PF00486 Transcriptional regulatory protein, C terminal CSC00_0913 PF03279 Bacterial lipid A biosynthesis acyltransferase CSC00_0916 PF13954 PapC N-terminal domain CSC00_0916 PF00577 Outer membrane usher protein CSC00_0916 PF13953 PapC C-terminal domain CSC00_0917 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_0917 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_0918 PF16970 Type-1 fimbrial protein, A CSC00_0921 PF00285 Citrate synthase, C-terminal domain CSC00_0924 PF00576 HIUase/Transthyretin family CSC00_0926 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CSC00_0926 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CSC00_0928 PF01406 tRNA synthetases class I (C) catalytic domain CSC00_0928 PF09190 DALR domain CSC00_0929 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CSC00_0930 PF00149 Calcineurin-like phosphoesterase CSC00_0932 PF00731 AIR carboxylase CSC00_0933 PF02222 ATP-grasp domain CSC00_0933 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CSC00_0938 PF00005 ABC transporter CSC00_0939 PF13472 GDSL-like Lipase/Acylhydrolase family CSC00_0940 PF00106 short chain dehydrogenase CSC00_0941 PF00085 Thioredoxin CSC00_0942 PF03649 Uncharacterised protein family (UPF0014) CSC00_0943 PF00005 ABC transporter CSC00_0944 PF01145 SPFH domain / Band 7 family CSC00_0944 PF16200 C-terminal region of band_7 CSC00_0945 PF01957 NfeD-like C-terminal, partner-binding CSC00_0946 PF13411 MerR HTH family regulatory protein CSC00_0947 PF00403 Heavy-metal-associated domain CSC00_0948 PF01963 TraB family CSC00_0949 PF04073 Aminoacyl-tRNA editing domain CSC00_0950 PF02872 5'-nucleotidase, C-terminal domain CSC00_0950 PF00149 Calcineurin-like phosphoesterase CSC00_0951 PF07690 Major Facilitator Superfamily CSC00_0953 PF02254 TrkA-N domain CSC00_0953 PF00999 Sodium/hydrogen exchanger family CSC00_0954 PF00294 pfkB family carbohydrate kinase CSC00_0955 PF00762 Ferrochelatase CSC00_0956 PF05191 Adenylate kinase, active site lid CSC00_0957 PF00183 Hsp90 protein CSC00_0957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_0958 PF02132 RecR protein CSC00_0958 PF13662 Toprim domain CSC00_0959 PF02575 YbaB/EbfC DNA-binding family CSC00_0960 PF12169 DNA polymerase III subunits gamma and tau domain III CSC00_0960 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CSC00_0960 PF12170 DNA polymerase III tau subunit V interacting with alpha CSC00_0961 PF00156 Phosphoribosyl transferase domain CSC00_0962 PF04304 Protein of unknown function (DUF454) CSC00_0963 PF07445 Primosomal replication protein priC CSC00_0964 PF10689 Protein of unknown function (DUF2496) CSC00_0965 PF04754 Putative transposase, YhgA-like CSC00_0966 PF00924 Mechanosensitive ion channel CSC00_0966 PF12795 Mechanosensitive ion channel porin domain CSC00_0966 PF12794 Mechanosensitive ion channel inner membrane domain 1 CSC00_0967 PF08361 MAATS-type transcriptional repressor, C-terminal region CSC00_0967 PF00440 Bacterial regulatory proteins, tetR family CSC00_0968 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_0968 PF00529 HlyD membrane-fusion protein of T1SS CSC00_0969 PF00873 AcrB/AcrD/AcrF family CSC00_0970 PF10757 Biofilm formation regulator YbaJ CSC00_0971 PF05321 Haemolysin expression modulating protein CSC00_0972 PF14602 Hexapeptide repeat of succinyl-transferase CSC00_0972 PF12464 Maltose acetyltransferase CSC00_0974 PF10777 Inner membrane protein YlaC CSC00_0975 PF00155 Aminotransferase class I and II CSC00_0975 PF00392 Bacterial regulatory proteins, gntR family CSC00_0977 PF00444 Ribosomal protein L36 CSC00_0978 PF01197 Ribosomal protein L31 CSC00_0979 PF00356 Bacterial regulatory proteins, lacI family CSC00_0980 PF02264 LamB porin CSC00_0981 PF00367 phosphotransferase system, EIIB CSC00_0981 PF02378 Phosphotransferase system, EIIC CSC00_0982 PF02449 Beta-galactosidase CSC00_0982 PF08533 Beta-galactosidase C-terminal domain CSC00_0982 PF08532 Beta-galactosidase trimerisation domain CSC00_0983 PF07745 Glycosyl hydrolase family 53 CSC00_0984 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0985 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_0986 PF13416 Bacterial extracellular solute-binding protein CSC00_0988 PF17912 MalK OB fold domain CSC00_0988 PF00005 ABC transporter CSC00_0989 PF00563 EAL domain CSC00_0989 PF12792 CSS motif domain associated with EAL CSC00_0990 PF02583 Metal-sensitive transcriptional repressor CSC00_0991 PF03824 High-affinity nickel-transport protein CSC00_0997 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSC00_0998 PF09619 Type III secretion system lipoprotein chaperone (YscW) CSC00_1000 PF00909 Ammonium Transporter Family CSC00_1001 PF00543 Nitrogen regulatory protein P-II CSC00_1002 PF00005 ABC transporter CSC00_1002 PF00664 ABC transporter transmembrane region CSC00_1003 PF00664 ABC transporter transmembrane region CSC00_1003 PF00005 ABC transporter CSC00_1004 PF01037 Lrp/AsnC ligand binding domain CSC00_1004 PF13404 AsnC-type helix-turn-helix domain CSC00_1005 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_1007 PF12793 Sugar transport-related sRNA regulator N-term CSC00_1007 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_1008 PF06508 Queuosine biosynthesis protein QueC CSC00_1011 PF13145 PPIC-type PPIASE domain CSC00_1012 PF13610 DDE domain CSC00_1013 PF13427 Domain of unknown function (DUF4111) CSC00_1013 PF01909 Nucleotidyltransferase domain CSC00_1015 PF00239 Resolvase, N terminal domain CSC00_1015 PF02796 Helix-turn-helix domain of resolvase CSC00_1016 PF01526 Tn3 transposase DDE domain CSC00_1016 PF13700 Domain of unknown function (DUF4158) CSC00_1017 PF00216 Bacterial DNA-binding protein CSC00_1018 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_1018 PF05362 Lon protease (S16) C-terminal proteolytic domain CSC00_1018 PF02190 ATP-dependent protease La (LON) substrate-binding domain CSC00_1019 PF07724 AAA domain (Cdc48 subfamily) CSC00_1019 PF06689 ClpX C4-type zinc finger CSC00_1019 PF10431 C-terminal, D2-small domain, of ClpB protein CSC00_1020 PF00574 Clp protease CSC00_1021 PF05698 Bacterial trigger factor protein (TF) C-terminus CSC00_1021 PF05697 Bacterial trigger factor protein (TF) CSC00_1021 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSC00_1023 PF01722 BolA-like protein CSC00_1024 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CSC00_1024 PF03923 Uncharacterized lipoprotein CSC00_1025 PF07690 Major Facilitator Superfamily CSC00_1026 PF06481 COX Aromatic Rich Motif CSC00_1026 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CSC00_1027 PF00115 Cytochrome C and Quinol oxidase polypeptide I CSC00_1028 PF00510 Cytochrome c oxidase subunit III CSC00_1029 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CSC00_1030 PF01040 UbiA prenyltransferase family CSC00_1032 PF09339 IclR helix-turn-helix domain CSC00_1032 PF01614 Bacterial transcriptional regulator CSC00_1033 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CSC00_1033 PF01488 Shikimate / quinate 5-dehydrogenase CSC00_1033 PF08501 Shikimate dehydrogenase substrate binding domain CSC00_1034 PF00890 FAD binding domain CSC00_1036 PF00890 FAD binding domain CSC00_1038 PF07690 Major Facilitator Superfamily CSC00_1039 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_1039 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_1040 PF07690 Major Facilitator Superfamily CSC00_1041 PF04461 Protein of unknown function (DUF520) CSC00_1042 PF02558 Ketopantoate reductase PanE/ApbA CSC00_1042 PF08546 Ketopantoate reductase PanE/ApbA C terminal CSC00_1043 PF01965 DJ-1/PfpI family CSC00_1045 PF02568 Thiamine biosynthesis protein (ThiI) CSC00_1045 PF02926 THUMP domain CSC00_1046 PF02609 Exonuclease VII small subunit CSC00_1047 PF00348 Polyprenyl synthetase CSC00_1048 PF02780 Transketolase, C-terminal domain CSC00_1048 PF02779 Transketolase, pyrimidine binding domain CSC00_1048 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CSC00_1049 PF00248 Aldo/keto reductase family CSC00_1050 PF04608 Phosphatidylglycerophosphatase A CSC00_1051 PF02769 AIR synthase related protein, C-terminal domain CSC00_1051 PF00586 AIR synthase related protein, N-terminal domain CSC00_1052 PF01029 NusB family CSC00_1053 PF00885 6,7-dimethyl-8-ribityllumazine synthase CSC00_1054 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSC00_1054 PF01872 RibD C-terminal domain CSC00_1055 PF03477 ATP cone domain CSC00_1056 PF11622 Protein of unknown function (DUF3251) CSC00_1058 PF03502 Nucleoside-specific channel-forming protein, Tsx CSC00_1061 PF07549 SecD/SecF GG Motif CSC00_1061 PF02355 Protein export membrane protein CSC00_1062 PF07549 SecD/SecF GG Motif CSC00_1062 PF13721 SecD export protein N-terminal TM region CSC00_1062 PF02355 Protein export membrane protein CSC00_1063 PF02699 Preprotein translocase subunit CSC00_1064 PF01702 Queuine tRNA-ribosyltransferase CSC00_1065 PF02547 Queuosine biosynthesis protein CSC00_1067 PF04336 Acyl carrier protein phosphodiesterase CSC00_1068 PF00578 AhpC/TSA family CSC00_1068 PF10417 C-terminal domain of 1-Cys peroxiredoxin CSC00_1070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_1072 PF03611 PTS system sugar-specific permease component CSC00_1073 PF00294 pfkB family carbohydrate kinase CSC00_1074 PF01116 Fructose-bisphosphate aldolase class-II CSC00_1075 PF01979 Amidohydrolase family CSC00_1077 PF00857 Isochorismatase family CSC00_1079 PF03466 LysR substrate binding domain CSC00_1079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1080 PF00128 Alpha amylase, catalytic domain CSC00_1080 PF02903 Alpha amylase, N-terminal ig-like domain CSC00_1081 PF00324 Amino acid permease CSC00_1082 PF05525 Branched-chain amino acid transport protein CSC00_1083 PF11808 Phosphate regulon sensor protein PhoR CSC00_1083 PF00989 PAS fold CSC00_1083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_1083 PF00512 His Kinase A (phospho-acceptor) domain CSC00_1084 PF00072 Response regulator receiver domain CSC00_1084 PF00486 Transcriptional regulatory protein, C terminal CSC00_1085 PF00149 Calcineurin-like phosphoesterase CSC00_1085 PF12320 Type 5 capsule protein repressor C-terminal domain CSC00_1086 PF13476 AAA domain CSC00_1087 PF00480 ROK family CSC00_1088 PF04381 Putative exonuclease, RdgC CSC00_1089 PF06865 Pyrimidine/purine nucleoside phosphorylase CSC00_1090 PF07302 AroM protein CSC00_1091 PF16362 YaiA protein CSC00_1092 PF01202 Shikimate kinase CSC00_1093 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) CSC00_1094 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CSC00_1095 PF14748 Pyrroline-5-carboxylate reductase dimerisation CSC00_1095 PF03807 NADP oxidoreductase coenzyme F420-dependent CSC00_1096 PF07769 psiF repeat CSC00_1097 PF00245 Alkaline phosphatase CSC00_1098 PF10796 Sigma-S stabilisation anti-adaptor protein CSC00_1099 PF07690 Major Facilitator Superfamily CSC00_1101 PF01820 D-ala D-ala ligase N-terminus CSC00_1101 PF07478 D-ala D-ala ligase C-terminus CSC00_1102 PF10953 Protein of unknown function (DUF2754) CSC00_1103 PF10954 Protein of unknown function (DUF2755) CSC00_1104 PF07759 Protein of unknown function (DUF1615) CSC00_1105 PF05992 SbmA/BacA-like family CSC00_1106 PF00857 Isochorismatase family CSC00_1107 PF00144 Beta-lactamase CSC00_1108 PF00490 Delta-aminolevulinic acid dehydratase CSC00_1110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CSC00_1111 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1112 PF00005 ABC transporter CSC00_1113 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CSC00_1114 PF02574 Homocysteine S-methyltransferase CSC00_1115 PF00324 Amino acid permease CSC00_1117 PF00324 Amino acid permease CSC00_1118 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CSC00_1119 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CSC00_1121 PF13458 Periplasmic binding protein CSC00_1122 PF02653 Branched-chain amino acid transport system / permease component CSC00_1123 PF11862 Domain of unknown function (DUF3382) CSC00_1123 PF02653 Branched-chain amino acid transport system / permease component CSC00_1124 PF00005 ABC transporter CSC00_1124 PF12399 Branched-chain amino acid ATP-binding cassette transporter CSC00_1125 PF00005 ABC transporter CSC00_1127 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_1128 PF00005 ABC transporter CSC00_1129 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1130 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1133 PF16967 E-set like domain CSC00_1133 PF15976 CS1-pili formation C-terminal CSC00_1134 PF18649 EcpB C-terminal domain CSC00_1135 PF16449 Fimbrillin MatB CSC00_1136 PF00196 Bacterial regulatory proteins, luxR family CSC00_1138 PF00005 ABC transporter CSC00_1140 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1141 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1145 PF00877 NlpC/P60 family CSC00_1146 PF00267 Gram-negative porin CSC00_1148 PF01472 PUA domain CSC00_1148 PF00696 Amino acid kinase family CSC00_1149 PF00171 Aldehyde dehydrogenase family CSC00_1151 PF00589 Phage integrase family CSC00_1151 PF13356 Arm DNA-binding domain CSC00_1151 PF14659 Phage integrase, N-terminal SAM-like domain CSC00_1152 PF13614 AAA domain CSC00_1155 PF04606 Ogr/Delta-like zinc finger CSC00_1161 PF17345 Family of unknown function (DUF5375) CSC00_1166 PF00069 Protein kinase domain CSC00_1166 PF13191 AAA ATPase domain CSC00_1167 PF00676 Dehydrogenase E1 component CSC00_1168 PF02779 Transketolase, pyrimidine binding domain CSC00_1168 PF02780 Transketolase, C-terminal domain CSC00_1169 PF02817 e3 binding domain CSC00_1169 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSC00_1169 PF00364 Biotin-requiring enzyme CSC00_1170 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_1170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSC00_1172 PF01791 DeoC/LacD family aldolase CSC00_1174 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_1174 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_1176 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSC00_1176 PF01842 ACT domain CSC00_1176 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_1177 PF03611 PTS system sugar-specific permease component CSC00_1178 PF00043 Glutathione S-transferase, C-terminal domain CSC00_1178 PF13417 Glutathione S-transferase, N-terminal domain CSC00_1179 PF13847 Methyltransferase domain CSC00_1180 PF09857 Putative toxin of bacterial toxin-antitoxin pair CSC00_1181 PF08943 CsiD CSC00_1182 PF01266 FAD dependent oxidoreductase CSC00_1183 PF00171 Aldehyde dehydrogenase family CSC00_1184 PF00202 Aminotransferase class-III CSC00_1185 PF00324 Amino acid permease CSC00_1186 PF07729 FCD domain CSC00_1186 PF00392 Bacterial regulatory proteins, gntR family CSC00_1187 PF07417 Sigma factor-binding transcriptional regulator Crl CSC00_1189 PF00156 Phosphoribosyl transferase domain CSC00_1190 PF07687 Peptidase dimerisation domain CSC00_1190 PF01546 Peptidase family M20/M25/M40 CSC00_1191 PF13673 Acetyltransferase (GNAT) domain CSC00_1192 PF11799 impB/mucB/samB family C-terminal domain CSC00_1192 PF00817 impB/mucB/samB family CSC00_1192 PF11798 IMS family HHH motif CSC00_1193 PF03009 Glycerophosphoryl diester phosphodiesterase family CSC00_1194 PF04400 (Na+)-NQR maturation NqrM CSC00_1195 PF00970 Oxidoreductase FAD-binding domain CSC00_1195 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_1195 PF00175 Oxidoreductase NAD-binding domain CSC00_1196 PF02508 Rnf-Nqr subunit, membrane protein CSC00_1197 PF02508 Rnf-Nqr subunit, membrane protein CSC00_1198 PF04205 FMN-binding domain CSC00_1199 PF03116 NQR2, RnfD, RnfE family CSC00_1200 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CSC00_1200 PF11973 NQRA C-terminal domain CSC00_1202 PF03734 L,D-transpeptidase catalytic domain CSC00_1203 PF13230 Glutamine amidotransferases class-II CSC00_1204 PF13580 SIS domain CSC00_1205 PF02770 Acyl-CoA dehydrogenase, middle domain CSC00_1205 PF09317 Domain of unknown function (DUF1974) CSC00_1205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSC00_1205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSC00_1206 PF00795 Carbon-nitrogen hydrolase CSC00_1207 PF01810 LysE type translocator CSC00_1208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1208 PF03466 LysR substrate binding domain CSC00_1210 PF00929 Exonuclease CSC00_1211 PF00075 RNase H CSC00_1212 PF08241 Methyltransferase domain CSC00_1213 PF16123 Hydroxyacylglutathione hydrolase C-terminus CSC00_1213 PF00753 Metallo-beta-lactamase superfamily CSC00_1214 PF01476 LysM domain CSC00_1214 PF01464 Transglycosylase SLT domain CSC00_1215 PF08241 Methyltransferase domain CSC00_1216 PF03372 Endonuclease/Exonuclease/phosphatase family CSC00_1217 PF07690 Major Facilitator Superfamily CSC00_1218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1218 PF03466 LysR substrate binding domain CSC00_1219 PF00248 Aldo/keto reductase family CSC00_1227 PF09383 NIL domain CSC00_1227 PF00005 ABC transporter CSC00_1228 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1229 PF03180 NLPA lipoprotein CSC00_1230 PF16358 RcsF lipoprotein CSC00_1231 PF01980 tRNA-methyltransferase O CSC00_1231 PF18389 TrmO C-terminal domain CSC00_1232 PF03129 Anticodon binding domain CSC00_1232 PF04073 Aminoacyl-tRNA editing domain CSC00_1232 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSC00_1233 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CSC00_1234 PF17185 NlpE C-terminal OB domain CSC00_1234 PF04170 NlpE N-terminal domain CSC00_1235 PF00472 RF-1 domain CSC00_1236 PF07152 YaeQ protein CSC00_1237 PF07073 Modulator of Rho-dependent transcription termination (ROF) CSC00_1238 PF01171 PP-loop family CSC00_1238 PF09179 TilS substrate binding domain CSC00_1238 PF11734 TilS substrate C-terminal domain CSC00_1239 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSC00_1241 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CSC00_1242 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CSC00_1242 PF02811 PHP domain CSC00_1242 PF01336 OB-fold nucleic acid binding domain CSC00_1242 PF07733 Bacterial DNA polymerase III alpha NTPase domain CSC00_1242 PF14579 Helix-hairpin-helix motif CSC00_1243 PF01351 Ribonuclease HII CSC00_1244 PF02684 Lipid-A-disaccharide synthetase CSC00_1245 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_1245 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CSC00_1246 PF07977 FabA-like domain CSC00_1247 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CSC00_1247 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_1248 PF03938 Outer membrane protein (OmpH-like) CSC00_1249 PF01103 Surface antigen CSC00_1249 PF07244 Surface antigen variable number repeat CSC00_1250 PF17820 PDZ domain CSC00_1250 PF02163 Peptidase family M50 CSC00_1252 PF01255 Putative undecaprenyl diphosphate synthase CSC00_1253 PF13288 DXP reductoisomerase C-terminal domain CSC00_1253 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CSC00_1253 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CSC00_1254 PF01765 Ribosome recycling factor CSC00_1255 PF00696 Amino acid kinase family CSC00_1256 PF00889 Elongation factor TS CSC00_1257 PF00318 Ribosomal protein S2 CSC00_1258 PF00557 Metallopeptidase family M24 CSC00_1259 PF08335 GlnD PII-uridylyltransferase CSC00_1259 PF01842 ACT domain CSC00_1259 PF01909 Nucleotidyltransferase domain CSC00_1259 PF01966 HD domain CSC00_1260 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CSC00_1260 PF14602 Hexapeptide repeat of succinyl-transferase CSC00_1260 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_1261 PF11944 Protein of unknown function (DUF3461) CSC00_1262 PF17853 GGDEF-like domain CSC00_1262 PF05651 Putative sugar diacid recognition CSC00_1262 PF13556 PucR C-terminal helix-turn-helix domain CSC00_1263 PF00595 PDZ domain CSC00_1264 PF01966 HD domain CSC00_1264 PF13286 Phosphohydrolase-associated domain CSC00_1265 PF01048 Phosphorylase superfamily CSC00_1266 PF01497 Periplasmic binding protein CSC00_1267 PF03458 UPF0126 domain CSC00_1268 PF01521 Iron-sulphur cluster biosynthesis CSC00_1269 PF00654 Voltage gated chloride channel CSC00_1270 PF00202 Aminotransferase class-III CSC00_1271 PF01032 FecCD transport family CSC00_1272 PF01497 Periplasmic binding protein CSC00_1273 PF00005 ABC transporter CSC00_1274 PF00593 TonB dependent receptor CSC00_1274 PF07715 TonB-dependent Receptor Plug Domain CSC00_1276 PF00912 Transglycosylase CSC00_1276 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CSC00_1276 PF14814 Bifunctional transglycosylase second domain CSC00_1276 PF00905 Penicillin binding protein transpeptidase domain CSC00_1279 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CSC00_1280 PF16537 Type II secretion system protein B CSC00_1281 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSC00_1281 PF03714 Bacterial pullanase-associated domain CSC00_1281 PF17967 Pullulanase N2 domain CSC00_1281 PF11852 Domain of unknown function (DUF3372) CSC00_1281 PF18494 Pullulanase Ins domain CSC00_1283 PF11356 Type II secretion system protein C CSC00_1284 PF00263 Bacterial type II and III secretion system protein CSC00_1284 PF03958 Bacterial type II/III secretion system short domain CSC00_1285 PF00437 Type II/IV secretion system protein CSC00_1286 PF00482 Type II secretion system (T2SS), protein F CSC00_1287 PF08334 Type II secretion system (T2SS), protein G CSC00_1287 PF07963 Prokaryotic N-terminal methylation motif CSC00_1288 PF07963 Prokaryotic N-terminal methylation motif CSC00_1289 PF07963 Prokaryotic N-terminal methylation motif CSC00_1289 PF02501 Type II secretion system (T2SS), protein I CSC00_1290 PF07963 Prokaryotic N-terminal methylation motif CSC00_1290 PF11612 Type II secretion system (T2SS), protein J CSC00_1291 PF03934 Type II secretion system (T2SS), protein K CSC00_1292 PF05134 Type II secretion system (T2SS), protein L CSC00_1292 PF12693 GspL periplasmic domain CSC00_1293 PF04612 Type II secretion system (T2SS), protein M CSC00_1294 PF01203 Type II secretion system (T2SS), protein N CSC00_1295 PF01478 Type IV leader peptidase family CSC00_1295 PF06750 Bacterial Peptidase A24 N-terminal domain CSC00_1296 PF00270 DEAD/DEAH box helicase CSC00_1296 PF04408 Helicase associated domain (HA2) CSC00_1296 PF00271 Helicase conserved C-terminal domain CSC00_1296 PF08482 ATP-dependent helicase C-terminal CSC00_1297 PF02834 LigT like Phosphoesterase CSC00_1298 PF17746 SfsA N-terminal OB domain CSC00_1298 PF03749 Sugar fermentation stimulation protein RE domain CSC00_1299 PF01258 Prokaryotic dksA/traR C4-type zinc finger CSC00_1300 PF00749 tRNA synthetases class I (E and Q), catalytic domain CSC00_1301 PF12626 Polymerase A arginine-rich C-terminus CSC00_1301 PF12627 Probable RNA and SrmB- binding site of polymerase A CSC00_1301 PF01743 Poly A polymerase head domain CSC00_1302 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CSC00_1303 PF02548 Ketopantoate hydroxymethyltransferase CSC00_1304 PF02569 Pantoate-beta-alanine ligase CSC00_1305 PF02261 Aspartate decarboxylase CSC00_1306 PF01522 Polysaccharide deacetylase CSC00_1307 PF03610 PTS system fructose IIA component CSC00_1308 PF01061 ABC-2 type transporter CSC00_1309 PF00005 ABC transporter CSC00_1310 PF00484 Carbonic anhydrase CSC00_1311 PF00156 Phosphoribosyl transferase domain CSC00_1313 PF01011 PQQ enzyme repeat CSC00_1314 PF07732 Multicopper oxidase CSC00_1314 PF07731 Multicopper oxidase CSC00_1314 PF00394 Multicopper oxidase CSC00_1315 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CSC00_1318 PF01527 Transposase CSC00_1319 PF13333 Integrase core domain CSC00_1319 PF00665 Integrase core domain CSC00_1319 PF13276 HTH-like domain CSC00_1321 PF17284 Spermidine synthase tetramerisation domain CSC00_1322 PF02675 S-adenosylmethionine decarboxylase CSC00_1323 PF06062 Uncharacterised protein family (UPF0231) CSC00_1324 PF00330 Aconitase family (aconitate hydratase) CSC00_1324 PF06434 Aconitate hydratase 2 N-terminus CSC00_1324 PF11791 Aconitate B N-terminal domain CSC00_1327 PF11737 Protein of unknown function (DUF3300) CSC00_1330 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_1330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSC00_1331 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSC00_1331 PF00364 Biotin-requiring enzyme CSC00_1331 PF02817 e3 binding domain CSC00_1332 PF17831 Pyruvate dehydrogenase E1 component middle domain CSC00_1332 PF00456 Transketolase, thiamine diphosphate binding domain CSC00_1333 PF00392 Bacterial regulatory proteins, gntR family CSC00_1333 PF07729 FCD domain CSC00_1335 PF00324 Amino acid permease CSC00_1337 PF04616 Glycosyl hydrolases family 43 CSC00_1337 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CSC00_1338 PF17113 Regulatory signalling modulator protein AmpE CSC00_1339 PF01510 N-acetylmuramoyl-L-alanine amidase CSC00_1340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CSC00_1340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CSC00_1341 PF07963 Prokaryotic N-terminal methylation motif CSC00_1342 PF00437 Type II/IV secretion system protein CSC00_1342 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CSC00_1343 PF00482 Type II secretion system (T2SS), protein F CSC00_1344 PF00478 IMP dehydrogenase / GMP reductase domain CSC00_1346 PF01121 Dephospho-CoA kinase CSC00_1347 PF07072 Cell division protein CSC00_1348 PF03884 DNA gyrase inhibitor YacG CSC00_1349 PF00293 NUDIX domain CSC00_1350 PF01043 SecA preprotein cross-linking domain CSC00_1350 PF07516 SecA Wing and Scaffold domain CSC00_1350 PF07517 SecA DEAD-like domain CSC00_1350 PF02810 SEC-C motif CSC00_1351 PF06558 Secretion monitor precursor protein (SecM) CSC00_1352 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CSC00_1353 PF12327 FtsZ family, C-terminal domain CSC00_1353 PF00091 Tubulin/FtsZ family, GTPase domain CSC00_1354 PF02491 SHS2 domain inserted in FTSA CSC00_1355 PF08478 POTRA domain, FtsQ-type CSC00_1355 PF03799 Cell division protein FtsQ CSC00_1356 PF01820 D-ala D-ala ligase N-terminus CSC00_1356 PF07478 D-ala D-ala ligase C-terminus CSC00_1357 PF08245 Mur ligase middle domain CSC00_1357 PF01225 Mur ligase family, catalytic domain CSC00_1357 PF02875 Mur ligase family, glutamate ligase domain CSC00_1358 PF04101 Glycosyltransferase family 28 C-terminal domain CSC00_1358 PF03033 Glycosyltransferase family 28 N-terminal domain CSC00_1359 PF01098 Cell cycle protein CSC00_1360 PF08245 Mur ligase middle domain CSC00_1360 PF02875 Mur ligase family, glutamate ligase domain CSC00_1361 PF00953 Glycosyl transferase family 4 CSC00_1361 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CSC00_1362 PF02875 Mur ligase family, glutamate ligase domain CSC00_1362 PF01225 Mur ligase family, catalytic domain CSC00_1362 PF08245 Mur ligase middle domain CSC00_1363 PF02875 Mur ligase family, glutamate ligase domain CSC00_1363 PF08245 Mur ligase middle domain CSC00_1363 PF01225 Mur ligase family, catalytic domain CSC00_1364 PF03717 Penicillin-binding Protein dimerisation domain CSC00_1364 PF00905 Penicillin binding protein transpeptidase domain CSC00_1365 PF04999 Cell division protein FtsL CSC00_1366 PF01795 MraW methylase family CSC00_1367 PF02381 MraZ protein, putative antitoxin-like CSC00_1368 PF00356 Bacterial regulatory proteins, lacI family CSC00_1368 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSC00_1369 PF10369 Small subunit of acetolactate synthase CSC00_1370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_1370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_1370 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_1371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1371 PF03466 LysR substrate binding domain CSC00_1373 PF08502 LeuA allosteric (dimerisation) domain CSC00_1373 PF00682 HMGL-like CSC00_1374 PF00180 Isocitrate/isopropylmalate dehydrogenase CSC00_1375 PF00330 Aconitase family (aconitate hydratase) CSC00_1376 PF00694 Aconitase C-terminal domain CSC00_1378 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_1378 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSC00_1379 PF08501 Shikimate dehydrogenase substrate binding domain CSC00_1379 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CSC00_1380 PF07690 Major Facilitator Superfamily CSC00_1381 PF01487 Type I 3-dehydroquinase CSC00_1382 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1382 PF03466 LysR substrate binding domain CSC00_1383 PF07690 Major Facilitator Superfamily CSC00_1384 PF07690 Major Facilitator Superfamily CSC00_1386 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_1386 PF12793 Sugar transport-related sRNA regulator N-term CSC00_1388 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1389 PF00005 ABC transporter CSC00_1390 PF09335 SNARE associated Golgi protein CSC00_1391 PF02311 AraC-like ligand binding domain CSC00_1391 PF12833 Helix-turn-helix domain CSC00_1393 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_1394 PF02610 L-arabinose isomerase CSC00_1394 PF11762 L-arabinose isomerase C-terminal domain CSC00_1395 PF00596 Class II Aldolase and Adducin N-terminal domain CSC00_1396 PF00136 DNA polymerase family B CSC00_1396 PF03104 DNA polymerase family B, exonuclease domain CSC00_1397 PF18337 RapA N-terminal Tudor like domain CSC00_1397 PF18339 RapA N-terminal Tudor like domain 1 CSC00_1397 PF00271 Helicase conserved C-terminal domain CSC00_1397 PF00176 SNF2 family N-terminal domain CSC00_1397 PF12137 RNA polymerase recycling family C-terminal CSC00_1398 PF00849 RNA pseudouridylate synthase CSC00_1399 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CSC00_1400 PF03390 2-hydroxycarboxylate transporter family CSC00_1401 PF17203 Single cache domain 3 CSC00_1401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_1402 PF12431 Transcriptional regulator CSC00_1402 PF00072 Response regulator receiver domain CSC00_1403 PF05099 Tellurite resistance protein TerB CSC00_1403 PF00226 DnaJ domain CSC00_1404 PF04453 LPS transport system D CSC00_1404 PF03968 OstA-like protein CSC00_1405 PF09312 SurA N-terminal domain CSC00_1405 PF00639 PPIC-type PPIASE domain CSC00_1406 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CSC00_1407 PF00398 Ribosomal RNA adenine dimethylase CSC00_1408 PF04379 ApaG domain CSC00_1409 PF00149 Calcineurin-like phosphoesterase CSC00_1410 PF00186 Dihydrofolate reductase CSC00_1411 PF02254 TrkA-N domain CSC00_1411 PF00999 Sodium/hydrogen exchanger family CSC00_1412 PF02525 Flavodoxin-like fold CSC00_1413 PF06004 Bacterial protein of unknown function (DUF903) CSC00_1414 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSC00_1414 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CSC00_1414 PF02142 MGS-like domain CSC00_1415 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CSC00_1415 PF00117 Glutamine amidotransferase class-I CSC00_1418 PF05173 Dihydrodipicolinate reductase, C-terminus CSC00_1418 PF01113 Dihydrodipicolinate reductase, N-terminus CSC00_1419 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CSC00_1420 PF04223 Citrate lyase, alpha subunit (CitF) CSC00_1421 PF03328 HpcH/HpaI aldolase/citrate lyase family CSC00_1422 PF06857 Malonate decarboxylase delta subunit (MdcD) CSC00_1423 PF08218 Citrate lyase ligase C-terminal domain CSC00_1423 PF00583 Acetyltransferase (GNAT) family CSC00_1424 PF03390 2-hydroxycarboxylate transporter family CSC00_1425 PF04277 Oxaloacetate decarboxylase, gamma chain CSC00_1426 PF00364 Biotin-requiring enzyme CSC00_1426 PF00682 HMGL-like CSC00_1426 PF02436 Conserved carboxylase domain CSC00_1427 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CSC00_1428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_1428 PF17203 Single cache domain 3 CSC00_1429 PF00072 Response regulator receiver domain CSC00_1429 PF12431 Transcriptional regulator CSC00_1430 PF02272 DHHA1 domain CSC00_1430 PF01411 tRNA synthetases class II (A) CSC00_1430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSC00_1431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1431 PF03466 LysR substrate binding domain CSC00_1432 PF01156 Inosine-uridine preferring nucleoside hydrolase CSC00_1433 PF02401 LytB protein CSC00_1434 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSC00_1435 PF01252 Signal peptidase (SPase) II CSC00_1436 PF00133 tRNA synthetases class I (I, L, M and V) CSC00_1436 PF08264 Anticodon-binding domain of tRNA CSC00_1436 PF06827 Zinc finger found in FPG and IleRS CSC00_1437 PF06574 FAD synthetase CSC00_1437 PF01687 Riboflavin kinase CSC00_1439 PF01649 Ribosomal protein S20 CSC00_1440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1440 PF03466 LysR substrate binding domain CSC00_1441 PF06965 Na+/H+ antiporter 1 CSC00_1442 PF01556 DnaJ C terminal domain CSC00_1442 PF00684 DnaJ central domain CSC00_1442 PF00226 DnaJ domain CSC00_1443 PF00012 Hsp70 protein CSC00_1444 PF10807 Protein of unknown function (DUF2541) CSC00_1445 PF13099 Domain of unknown function (DUF3944) CSC00_1445 PF03981 Ubiquinol-cytochrome C chaperone CSC00_1446 PF01184 GPR1/FUN34/yaaH family CSC00_1447 PF07690 Major Facilitator Superfamily CSC00_1448 PF00994 Probable molybdopterin binding domain CSC00_1449 PF00923 Transaldolase/Fructose-6-phosphate aldolase CSC00_1450 PF01235 Sodium:alanine symporter family CSC00_1451 PF03883 Peroxide stress protein YaaA CSC00_1453 PF14821 Threonine synthase N terminus CSC00_1453 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_1454 PF00288 GHMP kinases N terminal domain CSC00_1454 PF08544 GHMP kinases C terminal CSC00_1455 PF03447 Homoserine dehydrogenase, NAD binding domain CSC00_1455 PF00696 Amino acid kinase family CSC00_1455 PF01842 ACT domain CSC00_1455 PF00742 Homoserine dehydrogenase CSC00_1455 PF13840 ACT domain CSC00_1457 PF00588 SpoU rRNA Methylase family CSC00_1458 PF00486 Transcriptional regulatory protein, C terminal CSC00_1458 PF00072 Response regulator receiver domain CSC00_1459 PF06123 Inner membrane protein CreD CSC00_1460 PF00512 His Kinase A (phospho-acceptor) domain CSC00_1460 PF00672 HAMP domain CSC00_1460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_1461 PF00072 Response regulator receiver domain CSC00_1461 PF00486 Transcriptional regulatory protein, C terminal CSC00_1462 PF05981 CreA protein CSC00_1463 PF06445 GyrI-like small molecule binding domain CSC00_1463 PF12833 Helix-turn-helix domain CSC00_1464 PF00300 Histidine phosphatase superfamily (branch 1) CSC00_1465 PF01931 Protein of unknown function DUF84 CSC00_1466 PF01371 Trp repressor protein CSC00_1467 PF14718 Soluble lytic murein transglycosylase L domain CSC00_1467 PF01464 Transglycosylase SLT domain CSC00_1469 PF00005 ABC transporter CSC00_1469 PF12848 ABC transporter CSC00_1470 PF01381 Helix-turn-helix CSC00_1470 PF13521 AAA domain CSC00_1471 PF18073 Rubredoxin metal binding domain CSC00_1472 PF18429 Domain of unknown function (DUF5609) CSC00_1473 PF10144 Bacterial virulence factor haemolysin CSC00_1474 PF10437 Bacterial lipoate protein ligase C-terminus CSC00_1474 PF03099 Biotin/lipoate A/B protein ligase family CSC00_1475 PF01048 Phosphorylase superfamily CSC00_1476 PF01676 Metalloenzyme superfamily CSC00_1477 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CSC00_1477 PF00591 Glycosyl transferase family, a/b domain CSC00_1477 PF02885 Glycosyl transferase family, helical bundle domain CSC00_1478 PF01791 DeoC/LacD family aldolase CSC00_1479 PF01773 Na+ dependent nucleoside transporter N-terminus CSC00_1479 PF07662 Na+ dependent nucleoside transporter C-terminus CSC00_1479 PF07670 Nucleoside recognition CSC00_1480 PF01026 TatD related DNase CSC00_1481 PF01734 Patatin-like phospholipase CSC00_1482 PF07043 Protein of unknown function (DUF1328) CSC00_1483 PF04972 BON domain CSC00_1484 PF00009 Elongation factor Tu GTP binding domain CSC00_1484 PF03144 Elongation factor Tu domain 2 CSC00_1484 PF16658 Class II release factor RF3, C-terminal domain CSC00_1485 PF13419 Haloacid dehalogenase-like hydrolase CSC00_1486 PF00583 Acetyltransferase (GNAT) family CSC00_1487 PF03603 DNA polymerase III psi subunit CSC00_1488 PF05175 Methyltransferase small domain CSC00_1488 PF08468 Methyltransferase small domain N-terminal CSC00_1492 PF07256 Protein of unknown function (DUF1435) CSC00_1494 PF00990 Diguanylate cyclase, GGDEF domain CSC00_1495 PF06276 Ferric iron reductase FhuF-like transporter CSC00_1495 PF11575 FhuF 2Fe-2S C-terminal domain CSC00_1496 PF02378 Phosphotransferase system, EIIC CSC00_1496 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_1497 PF04073 Aminoacyl-tRNA editing domain CSC00_1498 PF00196 Bacterial regulatory proteins, luxR family CSC00_1499 PF00196 Bacterial regulatory proteins, luxR family CSC00_1501 PF01494 FAD binding domain CSC00_1503 PF06738 Putative threonine/serine exporter CSC00_1504 PF12821 Threonine/Serine exporter, ThrE CSC00_1505 PF17948 DnaT DNA-binding domain CSC00_1506 PF01695 IstB-like ATP binding protein CSC00_1507 PF10696 Protein of unknown function (DUF2501) CSC00_1508 PF00884 Sulfatase CSC00_1509 PF04754 Putative transposase, YhgA-like CSC00_1510 PF01380 SIS domain CSC00_1511 PF01380 SIS domain CSC00_1512 PF03613 PTS system mannose/fructose/sorbose family IID component CSC00_1513 PF03609 PTS system sorbose-specific iic component CSC00_1514 PF03830 PTS system sorbose subfamily IIB component CSC00_1515 PF03830 PTS system sorbose subfamily IIB component CSC00_1515 PF03610 PTS system fructose IIA component CSC00_1516 PF03610 PTS system fructose IIA component CSC00_1516 PF00158 Sigma-54 interaction domain CSC00_1516 PF00874 PRD domain CSC00_1517 PF01232 Mannitol dehydrogenase Rossmann domain CSC00_1517 PF08125 Mannitol dehydrogenase C-terminal domain CSC00_1518 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_1518 PF00107 Zinc-binding dehydrogenase CSC00_1519 PF00392 Bacterial regulatory proteins, gntR family CSC00_1519 PF07729 FCD domain CSC00_1520 PF07690 Major Facilitator Superfamily CSC00_1521 PF00814 Glycoprotease family CSC00_1521 PF00583 Acetyltransferase (GNAT) family CSC00_1522 PF00583 Acetyltransferase (GNAT) family CSC00_1523 PF01380 SIS domain CSC00_1523 PF01418 Helix-turn-helix domain, rpiR family CSC00_1524 PF01081 KDPG and KHG aldolase CSC00_1525 PF05035 2-keto-3-deoxy-galactonokinase CSC00_1528 PF07969 Amidohydrolase family CSC00_1531 PF02615 Malate/L-lactate dehydrogenase CSC00_1534 PF01047 MarR family CSC00_1536 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSC00_1537 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSC00_1538 PF00171 Aldehyde dehydrogenase family CSC00_1539 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CSC00_1540 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CSC00_1541 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSC00_1542 PF03328 HpcH/HpaI aldolase/citrate lyase family CSC00_1543 PF07690 Major Facilitator Superfamily CSC00_1544 PF12833 Helix-turn-helix domain CSC00_1545 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CSC00_1545 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CSC00_1546 PF01613 Flavin reductase like domain CSC00_1549 PF13722 5TM C-terminal transporter carbon starvation CstA CSC00_1549 PF02554 Carbon starvation protein CstA CSC00_1550 PF04328 Selenoprotein, putative CSC00_1551 PF07683 Cobalamin synthesis protein cobW C-terminal domain CSC00_1551 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSC00_1553 PF00171 Aldehyde dehydrogenase family CSC00_1554 PF04754 Putative transposase, YhgA-like CSC00_1555 PF12833 Helix-turn-helix domain CSC00_1555 PF02311 AraC-like ligand binding domain CSC00_1557 PF04286 Protein of unknown function (DUF445) CSC00_1558 PF07690 Major Facilitator Superfamily CSC00_1560 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CSC00_1561 PF01869 BadF/BadG/BcrA/BcrD ATPase family CSC00_1564 PF00529 HlyD membrane-fusion protein of T1SS CSC00_1564 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_1566 PF06568 Domain of unknown function (DUF1127) CSC00_1567 PF00392 Bacterial regulatory proteins, gntR family CSC00_1567 PF00155 Aminotransferase class I and II CSC00_1568 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSC00_1569 PF03466 LysR substrate binding domain CSC00_1569 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1570 PF02525 Flavodoxin-like fold CSC00_1571 PF02653 Branched-chain amino acid transport system / permease component CSC00_1572 PF02653 Branched-chain amino acid transport system / permease component CSC00_1573 PF00005 ABC transporter CSC00_1574 PF13407 Periplasmic binding protein domain CSC00_1575 PF00579 tRNA synthetases class I (W and Y) CSC00_1576 PF13533 Biotin-lipoyl like CSC00_1577 PF00005 ABC transporter CSC00_1585 PF08007 Cupin superfamily protein CSC00_1588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_1588 PF00512 His Kinase A (phospho-acceptor) domain CSC00_1588 PF00672 HAMP domain CSC00_1589 PF00486 Transcriptional regulatory protein, C terminal CSC00_1589 PF00072 Response regulator receiver domain CSC00_1591 PF02321 Outer membrane efflux protein CSC00_1592 PF11604 Copper binding periplasmic protein CusF CSC00_1593 PF00529 HlyD membrane-fusion protein of T1SS CSC00_1593 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_1594 PF00873 AcrB/AcrD/AcrF family CSC00_1596 PF08212 Lipocalin-like domain CSC00_1597 PF13411 MerR HTH family regulatory protein CSC00_1599 PF00106 short chain dehydrogenase CSC00_1606 PF08349 Protein of unknown function (DUF1722) CSC00_1607 PF02264 LamB porin CSC00_1611 PF04616 Glycosyl hydrolases family 43 CSC00_1611 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CSC00_1618 PF13091 PLD-like domain CSC00_1618 PF13087 AAA domain CSC00_1619 PF13333 Integrase core domain CSC00_1619 PF13276 HTH-like domain CSC00_1619 PF00665 Integrase core domain CSC00_1621 PF01527 Transposase CSC00_1624 PF17345 Family of unknown function (DUF5375) CSC00_1629 PF04606 Ogr/Delta-like zinc finger CSC00_1637 PF13356 Arm DNA-binding domain CSC00_1637 PF00589 Phage integrase family CSC00_1639 PF00484 Carbonic anhydrase CSC00_1640 PF00916 Sulfate permease family CSC00_1640 PF01740 STAS domain CSC00_1641 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_1641 PF00107 Zinc-binding dehydrogenase CSC00_1643 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1644 PF00149 Calcineurin-like phosphoesterase CSC00_1645 PF00005 ABC transporter CSC00_1645 PF17912 MalK OB fold domain CSC00_1646 PF13416 Bacterial extracellular solute-binding protein CSC00_1647 PF01261 Xylose isomerase-like TIM barrel CSC00_1648 PF01261 Xylose isomerase-like TIM barrel CSC00_1649 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_1649 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_1650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_1650 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_1650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_1652 PF00294 pfkB family carbohydrate kinase CSC00_1653 PF01418 Helix-turn-helix domain, rpiR family CSC00_1653 PF02685 Glucokinase CSC00_1653 PF01380 SIS domain CSC00_1655 PF04962 KduI/IolB family CSC00_1656 PF00171 Aldehyde dehydrogenase family CSC00_1658 PF05872 Bacterial protein of unknown function (DUF853) CSC00_1659 PF03739 Lipopolysaccharide export system permease LptF/LptG CSC00_1660 PF03739 Lipopolysaccharide export system permease LptF/LptG CSC00_1662 PF02789 Cytosol aminopeptidase family, N-terminal domain CSC00_1662 PF00883 Cytosol aminopeptidase family, catalytic domain CSC00_1663 PF04364 DNA polymerase III chi subunit, HolC CSC00_1664 PF08264 Anticodon-binding domain of tRNA CSC00_1664 PF10458 Valyl tRNA synthetase tRNA binding arm CSC00_1664 PF00133 tRNA synthetases class I (I, L, M and V) CSC00_1665 PF00583 Acetyltransferase (GNAT) family CSC00_1666 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CSC00_1667 PF06877 Regulator of ribonuclease activity B CSC00_1668 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CSC00_1668 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CSC00_1669 PF00392 Bacterial regulatory proteins, gntR family CSC00_1669 PF07702 UTRA domain CSC00_1670 PF03606 C4-dicarboxylate anaerobic carrier CSC00_1671 PF01979 Amidohydrolase family CSC00_1672 PF00294 pfkB family carbohydrate kinase CSC00_1673 PF01380 SIS domain CSC00_1675 PF04074 YhcH/YjgK/YiaL CSC00_1677 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CSC00_1677 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CSC00_1678 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CSC00_1678 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CSC00_1679 PF01042 Endoribonuclease L-PSP CSC00_1680 PF00689 Cation transporting ATPase, C-terminus CSC00_1680 PF00690 Cation transporter/ATPase, N-terminus CSC00_1681 PF00356 Bacterial regulatory proteins, lacI family CSC00_1682 PF00367 phosphotransferase system, EIIB CSC00_1682 PF02378 Phosphotransferase system, EIIC CSC00_1683 PF11941 Domain of unknown function (DUF3459) CSC00_1683 PF00128 Alpha amylase, catalytic domain CSC00_1684 PF02378 Phosphotransferase system, EIIC CSC00_1685 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSC00_1685 PF02056 Family 4 glycosyl hydrolase CSC00_1686 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_1688 PF13597 Anaerobic ribonucleoside-triphosphate reductase CSC00_1688 PF03477 ATP cone domain CSC00_1690 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CSC00_1691 PF04221 RelB antitoxin CSC00_1692 PF00874 PRD domain CSC00_1692 PF05043 Mga helix-turn-helix domain CSC00_1692 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_1692 PF08279 HTH domain CSC00_1693 PF10282 Lactonase, 7-bladed beta-propeller CSC00_1694 PF07071 KDGP aldolase CSC00_1695 PF03841 L-seryl-tRNA selenium transferase CSC00_1696 PF01979 Amidohydrolase family CSC00_1703 PF07361 Cytochrome b562 CSC00_1704 PF01523 Putative modulator of DNA gyrase CSC00_1705 PF04751 Protein of unknown function (DUF615) CSC00_1710 PF01225 Mur ligase family, catalytic domain CSC00_1710 PF02875 Mur ligase family, glutamate ligase domain CSC00_1710 PF08245 Mur ligase middle domain CSC00_1712 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CSC00_1713 PF02653 Branched-chain amino acid transport system / permease component CSC00_1714 PF02653 Branched-chain amino acid transport system / permease component CSC00_1715 PF00005 ABC transporter CSC00_1717 PF13407 Periplasmic binding protein domain CSC00_1718 PF00719 Inorganic pyrophosphatase CSC00_1721 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CSC00_1722 PF04357 TamB, inner membrane protein subunit of TAM complex CSC00_1723 PF17243 POTRA domain TamA domain 1 CSC00_1723 PF01103 Surface antigen CSC00_1723 PF07244 Surface antigen variable number repeat CSC00_1724 PF01625 Peptide methionine sulfoxide reductase CSC00_1725 PF03471 Transporter associated domain CSC00_1725 PF01595 Cyclin M transmembrane N-terminal domain CSC00_1725 PF00571 CBS domain CSC00_1726 PF06526 Protein of unknown function (DUF1107) CSC00_1727 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CSC00_1728 PF00459 Inositol monophosphatase family CSC00_1729 PF00149 Calcineurin-like phosphoesterase CSC00_1729 PF02872 5'-nucleotidase, C-terminal domain CSC00_1730 PF01638 HxlR-like helix-turn-helix CSC00_1731 PF05368 NmrA-like family CSC00_1732 PF12833 Helix-turn-helix domain CSC00_1733 PF00892 EamA-like transporter family CSC00_1734 PF01814 Hemerythrin HHE cation binding domain CSC00_1734 PF04405 Domain of Unknown function (DUF542) CSC00_1735 PF00324 Amino acid permease CSC00_1736 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CSC00_1736 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSC00_1737 PF08525 Opacity-associated protein A N-terminal motif CSC00_1737 PF04225 Opacity-associated protein A LysM-like domain CSC00_1738 PF03948 Ribosomal protein L9, C-terminal domain CSC00_1738 PF01281 Ribosomal protein L9, N-terminal domain CSC00_1739 PF01084 Ribosomal protein S18 CSC00_1740 PF01250 Ribosomal protein S6 CSC00_1741 PF07338 Protein of unknown function (DUF1471) CSC00_1742 PF07690 Major Facilitator Superfamily CSC00_1743 PF00596 Class II Aldolase and Adducin N-terminal domain CSC00_1744 PF01261 Xylose isomerase-like TIM barrel CSC00_1745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CSC00_1746 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_1747 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_1748 PF03611 PTS system sugar-specific permease component CSC00_1750 PF08220 DeoR-like helix-turn-helix domain CSC00_1750 PF00455 DeoR C terminal sensor domain CSC00_1751 PF00326 Prolyl oligopeptidase family CSC00_1752 PF07338 Protein of unknown function (DUF1471) CSC00_1753 PF07338 Protein of unknown function (DUF1471) CSC00_1754 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSC00_1754 PF02770 Acyl-CoA dehydrogenase, middle domain CSC00_1754 PF18158 Adaptive response protein AidB N-terminal domain CSC00_1755 PF08032 RNA 2'-O ribose methyltransferase substrate binding CSC00_1755 PF00588 SpoU rRNA Methylase family CSC00_1756 PF00773 RNB domain CSC00_1756 PF17876 Cold shock domain CSC00_1756 PF00575 S1 RNA binding domain CSC00_1756 PF08461 Ribonuclease R winged-helix domain CSC00_1756 PF08206 Ribonuclease B OB domain CSC00_1757 PF02082 Transcriptional regulator CSC00_1758 PF00709 Adenylosuccinate synthetase CSC00_1759 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CSC00_1762 PF01145 SPFH domain / Band 7 family CSC00_1763 PF01145 SPFH domain / Band 7 family CSC00_1763 PF12221 Bacterial membrane protein N terminal CSC00_1764 PF16360 GTP-binding GTPase Middle Region CSC00_1764 PF13167 GTP-binding GTPase N-terminal CSC00_1764 PF01926 50S ribosome-binding GTPase CSC00_1765 PF17209 Hfq protein CSC00_1767 PF08676 MutL C terminal dimerisation domain CSC00_1767 PF01119 DNA mismatch repair protein, C-terminal domain CSC00_1768 PF01520 N-acetylmuramoyl-L-alanine amidase CSC00_1769 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CSC00_1770 PF03853 YjeF-related protein N-terminus CSC00_1770 PF01256 Carbohydrate kinase CSC00_1771 PF08331 Domain of unknown function (DUF1730) CSC00_1776 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_1777 PF00929 Exonuclease CSC00_1778 PF03193 RsgA GTPase CSC00_1779 PF02666 Phosphatidylserine decarboxylase CSC00_1780 PF12794 Mechanosensitive ion channel inner membrane domain 1 CSC00_1780 PF12795 Mechanosensitive ion channel porin domain CSC00_1780 PF00924 Mechanosensitive ion channel CSC00_1781 PF13520 Amino acid permease CSC00_1782 PF00152 tRNA synthetases class II (D, K and N) CSC00_1783 PF00890 FAD binding domain CSC00_1783 PF02910 Fumarate reductase flavoprotein C-term CSC00_1784 PF13085 2Fe-2S iron-sulfur cluster binding domain CSC00_1784 PF13183 4Fe-4S dicluster domain CSC00_1785 PF02300 Fumarate reductase subunit C CSC00_1786 PF02313 Fumarate reductase subunit D CSC00_1787 PF08212 Lipocalin-like domain CSC00_1788 PF00893 Small Multidrug Resistance protein CSC00_1789 PF08085 Entericidin EcnA/B family CSC00_1791 PF09285 Elongation factor P, C-terminal CSC00_1791 PF08207 Elongation factor P (EF-P) KOW-like domain CSC00_1791 PF01132 Elongation factor P (EF-P) OB domain CSC00_1792 PF04055 Radical SAM superfamily CSC00_1794 PF05598 Transposase domain (DUF772) CSC00_1794 PF01609 Transposase DDE domain CSC00_1796 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_1796 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_1797 PF13953 PapC C-terminal domain CSC00_1797 PF00577 Outer membrane usher protein CSC00_1797 PF13954 PapC N-terminal domain CSC00_1801 PF00529 HlyD membrane-fusion protein of T1SS CSC00_1801 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_1802 PF03412 Peptidase C39 family CSC00_1802 PF00005 ABC transporter CSC00_1802 PF00664 ABC transporter transmembrane region CSC00_1804 PF13698 Domain of unknown function (DUF4156) CSC00_1805 PF00118 TCP-1/cpn60 chaperonin family CSC00_1806 PF00166 Chaperonin 10 Kd subunit CSC00_1808 PF13520 Amino acid permease CSC00_1809 PF04186 FxsA cytoplasmic membrane protein CSC00_1811 PF00206 Lyase CSC00_1811 PF10415 Fumarase C C-terminus CSC00_1812 PF03605 Anaerobic c4-dicarboxylate membrane transporter CSC00_1813 PF03091 CutA1 divalent ion tolerance protein CSC00_1814 PF11412 Disulphide bond corrector protein DsbC CSC00_1814 PF02683 Cytochrome C biogenesis protein transmembrane region CSC00_1819 PF00665 Integrase core domain CSC00_1819 PF13333 Integrase core domain CSC00_1819 PF13276 HTH-like domain CSC00_1825 PF14883 Hypothetical glycosyl hydrolase family 13 CSC00_1825 PF01522 Polysaccharide deacetylase CSC00_1826 PF00535 Glycosyl transferase family 2 CSC00_1829 PF03741 Integral membrane protein TerC family CSC00_1831 PF00226 DnaJ domain CSC00_1831 PF01556 DnaJ C terminal domain CSC00_1834 PF13276 HTH-like domain CSC00_1834 PF13333 Integrase core domain CSC00_1834 PF00665 Integrase core domain CSC00_1836 PF06406 StbA protein CSC00_1839 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSC00_1839 PF02056 Family 4 glycosyl hydrolase CSC00_1840 PF12833 Helix-turn-helix domain CSC00_1841 PF08946 Osmosensory transporter coiled coil CSC00_1841 PF00083 Sugar (and other) transporter CSC00_1842 PF03831 PhnA domain CSC00_1842 PF08274 PhnA Zinc-Ribbon CSC00_1843 PF06983 3-demethylubiquinone-9 3-methyltransferase CSC00_1844 PF00392 Bacterial regulatory proteins, gntR family CSC00_1844 PF07702 UTRA domain CSC00_1845 PF06754 Phosphonate metabolism protein PhnG CSC00_1846 PF05845 Bacterial phosphonate metabolism protein (PhnH) CSC00_1847 PF05861 Bacterial phosphonate metabolism protein (PhnI) CSC00_1848 PF06007 Phosphonate metabolism protein PhnJ CSC00_1849 PF00005 ABC transporter CSC00_1850 PF00005 ABC transporter CSC00_1851 PF07969 Amidohydrolase family CSC00_1853 PF12706 Beta-lactamase superfamily domain CSC00_1855 PF13426 PAS domain CSC00_1855 PF00072 Response regulator receiver domain CSC00_1855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_1856 PF00005 ABC transporter CSC00_1857 PF02653 Branched-chain amino acid transport system / permease component CSC00_1858 PF13407 Periplasmic binding protein domain CSC00_1862 PF00072 Response regulator receiver domain CSC00_1862 PF00486 Transcriptional regulatory protein, C terminal CSC00_1863 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_1863 PF00384 Molybdopterin oxidoreductase CSC00_1863 PF01568 Molydopterin dinucleotide binding domain CSC00_1864 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_1864 PF00384 Molybdopterin oxidoreductase CSC00_1864 PF01568 Molydopterin dinucleotide binding domain CSC00_1865 PF08238 Sel1 repeat CSC00_1866 PF00375 Sodium:dicarboxylate symporter family CSC00_1868 PF00501 AMP-binding enzyme CSC00_1868 PF16177 Acetyl-coenzyme A synthetase N-terminus CSC00_1868 PF13193 AMP-binding enzyme C-terminal domain CSC00_1869 PF04341 Protein of unknown function, DUF485 CSC00_1870 PF00474 Sodium:solute symporter family CSC00_1873 PF00577 Outer membrane usher protein CSC00_1873 PF13954 PapC N-terminal domain CSC00_1873 PF13953 PapC C-terminal domain CSC00_1874 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_1874 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_1875 PF00419 Fimbrial protein CSC00_1877 PF04172 LrgB-like family CSC00_1878 PF03788 LrgA family CSC00_1879 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_1879 PF03466 LysR substrate binding domain CSC00_1880 PF00999 Sodium/hydrogen exchanger family CSC00_1881 PF00860 Permease family CSC00_1882 PF00043 Glutathione S-transferase, C-terminal domain CSC00_1882 PF02798 Glutathione S-transferase, N-terminal domain CSC00_1883 PF09278 MerR, DNA binding CSC00_1883 PF00376 MerR family regulatory protein CSC00_1884 PF12833 Helix-turn-helix domain CSC00_1885 PF12792 CSS motif domain associated with EAL CSC00_1885 PF00563 EAL domain CSC00_1887 PF15940 Family of unknown function CSC00_1888 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1891 PF08402 TOBE domain CSC00_1891 PF00005 ABC transporter CSC00_1892 PF00753 Metallo-beta-lactamase superfamily CSC00_1892 PF12706 Beta-lactamase superfamily domain CSC00_1893 PF00356 Bacterial regulatory proteins, lacI family CSC00_1894 PF00459 Inositol monophosphatase family CSC00_1896 PF01103 Surface antigen CSC00_1896 PF07244 Surface antigen variable number repeat CSC00_1899 PF07519 Tannase and feruloyl esterase CSC00_1900 PF12833 Helix-turn-helix domain CSC00_1901 PF07715 TonB-dependent Receptor Plug Domain CSC00_1901 PF00593 TonB dependent receptor CSC00_1903 PF01464 Transglycosylase SLT domain CSC00_1904 PF00436 Single-strand binding protein family CSC00_1905 PF17760 UvrA interaction domain CSC00_1905 PF00005 ABC transporter CSC00_1905 PF17755 UvrA DNA-binding domain CSC00_1906 PF04237 YjbR CSC00_1907 PF01894 Uncharacterised protein family UPF0047 CSC00_1908 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CSC00_1909 PF00155 Aminotransferase class I and II CSC00_1910 PF00842 Alanine racemase, C-terminal domain CSC00_1910 PF01168 Alanine racemase, N-terminal domain CSC00_1911 PF00772 DnaB-like helicase N terminal domain CSC00_1911 PF03796 DnaB-like helicase C terminal domain CSC00_1912 PF00107 Zinc-binding dehydrogenase CSC00_1912 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_1913 PF09583 Phage shock protein G (Phageshock_PspG) CSC00_1914 PF01207 Dihydrouridine synthase (Dus) CSC00_1917 PF01475 Ferric uptake regulator family CSC00_1918 PF05532 CsbD-like CSC00_1920 PF01554 MatE CSC00_1921 PF01726 LexA DNA binding domain CSC00_1921 PF00717 Peptidase S24-like CSC00_1922 PF01219 Prokaryotic diacylglycerol kinase CSC00_1923 PF01553 Acyltransferase CSC00_1924 PF01040 UbiA prenyltransferase family CSC00_1925 PF04345 Chorismate lyase CSC00_1926 PF07148 Maltose operon periplasmic protein precursor (MalM) CSC00_1927 PF02264 LamB porin CSC00_1928 PF00005 ABC transporter CSC00_1928 PF17912 MalK OB fold domain CSC00_1929 PF01547 Bacterial extracellular solute-binding protein CSC00_1930 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1930 PF14785 Maltose transport system permease protein MalF P2 domain CSC00_1931 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_1932 PF06146 Phosphate-starvation-inducible E CSC00_1933 PF03313 Serine dehydratase alpha chain CSC00_1937 PF01042 Endoribonuclease L-PSP CSC00_1939 PF12804 MobA-like NTP transferase domain CSC00_1939 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_1939 PF14602 Hexapeptide repeat of succinyl-transferase CSC00_1940 PF00342 Phosphoglucose isomerase CSC00_1941 PF01842 ACT domain CSC00_1941 PF00696 Amino acid kinase family CSC00_1942 PF01758 Sodium Bile acid symporter family CSC00_1943 PF11656 YjbD family (DUF3811) CSC00_1944 PF00849 RNA pseudouridylate synthase CSC00_1944 PF01479 S4 domain CSC00_1945 PF13936 Helix-turn-helix domain CSC00_1945 PF04198 Putative sugar-binding domain CSC00_1946 PF00106 short chain dehydrogenase CSC00_1947 PF03610 PTS system fructose IIA component CSC00_1948 PF03830 PTS system sorbose subfamily IIB component CSC00_1949 PF03609 PTS system sorbose-specific iic component CSC00_1950 PF03613 PTS system mannose/fructose/sorbose family IID component CSC00_1951 PF00107 Zinc-binding dehydrogenase CSC00_1951 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_1952 PF08501 Shikimate dehydrogenase substrate binding domain CSC00_1953 PF02690 Na+/Pi-cotransporter CSC00_1954 PF00809 Pterin binding enzyme CSC00_1954 PF02310 B12 binding domain CSC00_1954 PF02574 Homocysteine S-methyltransferase CSC00_1954 PF02607 B12 binding domain CSC00_1954 PF02965 Vitamin B12 dependent methionine synthase, activation domain CSC00_1955 PF09339 IclR helix-turn-helix domain CSC00_1955 PF01614 Bacterial transcriptional regulator CSC00_1956 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CSC00_1957 PF00463 Isocitrate lyase family CSC00_1958 PF01274 Malate synthase CSC00_1959 PF04204 Homoserine O-succinyltransferase CSC00_1960 PF13673 Acetyltransferase (GNAT) domain CSC00_1965 PF02142 MGS-like domain CSC00_1965 PF01808 AICARFT/IMPCHase bienzyme CSC00_1966 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CSC00_1966 PF02843 Phosphoribosylglycinamide synthetase, C domain CSC00_1966 PF02844 Phosphoribosylglycinamide synthetase, N domain CSC00_1967 PF00072 Response regulator receiver domain CSC00_1967 PF02954 Bacterial regulatory protein, Fis family CSC00_1967 PF00158 Sigma-54 interaction domain CSC00_1968 PF00512 His Kinase A (phospho-acceptor) domain CSC00_1968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_1969 PF13801 Heavy-metal resistance CSC00_1970 PF07356 Protein of unknown function (DUF1481) CSC00_1971 PF00216 Bacterial DNA-binding protein CSC00_1972 PF04222 Protein of unknown function (DUF416) CSC00_1973 PF04493 Endonuclease V CSC00_1974 PF01208 Uroporphyrinogen decarboxylase (URO-D) CSC00_1975 PF00293 NUDIX domain CSC00_1975 PF09297 NADH pyrophosphatase zinc ribbon domain CSC00_1976 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CSC00_1977 PF13667 ThiC-associated domain CSC00_1977 PF01964 Radical SAM ThiC family CSC00_1978 PF02581 Thiamine monophosphate synthase CSC00_1979 PF00899 ThiF family CSC00_1980 PF02597 ThiS family CSC00_1981 PF05690 Thiazole biosynthesis protein ThiG CSC00_1982 PF06968 Biotin and Thiamin Synthesis associated domain CSC00_1982 PF04055 Radical SAM superfamily CSC00_1984 PF00990 Diguanylate cyclase, GGDEF domain CSC00_1985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_1986 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSC00_1987 PF03605 Anaerobic c4-dicarboxylate membrane transporter CSC00_1988 PF04998 RNA polymerase Rpb1, domain 5 CSC00_1988 PF05000 RNA polymerase Rpb1, domain 4 CSC00_1988 PF04983 RNA polymerase Rpb1, domain 3 CSC00_1988 PF00623 RNA polymerase Rpb1, domain 2 CSC00_1988 PF04997 RNA polymerase Rpb1, domain 1 CSC00_1989 PF04561 RNA polymerase Rpb2, domain 2 CSC00_1989 PF04565 RNA polymerase Rpb2, domain 3 CSC00_1989 PF10385 RNA polymerase beta subunit external 1 domain CSC00_1989 PF00562 RNA polymerase Rpb2, domain 6 CSC00_1989 PF04563 RNA polymerase beta subunit CSC00_1989 PF04560 RNA polymerase Rpb2, domain 7 CSC00_1990 PF00542 Ribosomal protein L7/L12 C-terminal domain CSC00_1990 PF16320 Ribosomal protein L7/L12 dimerisation domain CSC00_1991 PF00466 Ribosomal protein L10 CSC00_1992 PF00687 Ribosomal protein L1p/L10e family CSC00_1993 PF03946 Ribosomal protein L11, N-terminal domain CSC00_1993 PF00298 Ribosomal protein L11, RNA binding domain CSC00_1994 PF02357 Transcription termination factor nusG CSC00_1994 PF00467 KOW motif CSC00_1995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CSC00_1996 PF03144 Elongation factor Tu domain 2 CSC00_1996 PF03143 Elongation factor Tu C-terminal domain CSC00_1996 PF00009 Elongation factor Tu GTP binding domain CSC00_2001 PF00485 Phosphoribulokinase / Uridine kinase family CSC00_2002 PF02237 Biotin protein ligase C terminal domain CSC00_2002 PF08279 HTH domain CSC00_2002 PF03099 Biotin/lipoate A/B protein ligase family CSC00_2003 PF01565 FAD binding domain CSC00_2003 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CSC00_2009 PF12724 Flavodoxin domain CSC00_2010 PF02386 Cation transport protein CSC00_2011 PF09186 Domain of unknown function (DUF1949) CSC00_2011 PF01205 Uncharacterized protein family UPF0029 CSC00_2012 PF00557 Metallopeptidase family M24 CSC00_2013 PF00378 Enoyl-CoA hydratase/isomerase CSC00_2013 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSC00_2013 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSC00_2014 PF00108 Thiolase, N-terminal domain CSC00_2014 PF02803 Thiolase, C-terminal domain CSC00_2015 PF00175 Oxidoreductase NAD-binding domain CSC00_2015 PF00970 Oxidoreductase FAD-binding domain CSC00_2016 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CSC00_2018 PF02357 Transcription termination factor nusG CSC00_2019 PF01026 TatD related DNase CSC00_2020 PF00902 Sec-independent protein translocase protein (TatC) CSC00_2022 PF02416 mttA/Hcf106 family CSC00_2023 PF03109 ABC1 family CSC00_2024 PF02036 SCP-2 sterol transfer family CSC00_2025 PF01209 ubiE/COQ5 methyltransferase family CSC00_2026 PF02646 RmuC family CSC00_2027 PF01048 Phosphorylase superfamily CSC00_2028 PF01738 Dienelactone hydrolase family CSC00_2029 PF01717 Cobalamin-independent synthase, Catalytic domain CSC00_2029 PF08267 Cobalamin-independent synthase, N-terminal domain CSC00_2030 PF00892 EamA-like transporter family CSC00_2032 PF12146 Serine aminopeptidase, S33 CSC00_2033 PF01810 LysE type translocator CSC00_2034 PF04754 Putative transposase, YhgA-like CSC00_2035 PF01810 LysE type translocator CSC00_2036 PF00270 DEAD/DEAH box helicase CSC00_2036 PF09382 RQC domain CSC00_2036 PF00271 Helicase conserved C-terminal domain CSC00_2036 PF16124 RecQ zinc-binding CSC00_2036 PF00570 HRDC domain CSC00_2037 PF02253 Phospholipase A1 CSC00_2038 PF03061 Thioesterase superfamily CSC00_2039 PF00892 EamA-like transporter family CSC00_2040 PF01544 CorA-like Mg2+ transporter protein CSC00_2042 PF00580 UvrD/REP helicase N-terminal domain CSC00_2042 PF13361 UvrD-like helicase C-terminal domain CSC00_2043 PF13419 Haloacid dehalogenase-like hydrolase CSC00_2044 PF02899 Phage integrase, N-terminal SAM-like domain CSC00_2044 PF00589 Phage integrase family CSC00_2045 PF04340 Protein of unknown function, DUF484 CSC00_2046 PF01678 Diaminopimelate epimerase CSC00_2047 PF13627 Prokaryotic lipoprotein-attachment site CSC00_2048 PF01491 Frataxin-like domain CSC00_2049 PF01295 Adenylate cyclase, class-I CSC00_2049 PF12633 Adenylate cyclase NT domain CSC00_2050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CSC00_2050 PF03900 Porphobilinogen deaminase, C-terminal domain CSC00_2051 PF02602 Uroporphyrinogen-III synthase HemD CSC00_2052 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CSC00_2053 PF07719 Tetratricopeptide repeat CSC00_2053 PF07219 HemY protein N-terminus CSC00_2059 PF00324 Amino acid permease CSC00_2060 PF03808 Glycosyl transferase WecB/TagA/CpsF family CSC00_2061 PF06899 WzyE protein, O-antigen assembly polymerase CSC00_2062 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CSC00_2063 PF01943 Polysaccharide biosynthesis protein CSC00_2064 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CSC00_2066 PF00483 Nucleotidyl transferase CSC00_2067 PF16363 GDP-mannose 4,6 dehydratase CSC00_2068 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CSC00_2068 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CSC00_2068 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CSC00_2069 PF02350 UDP-N-acetylglucosamine 2-epimerase CSC00_2070 PF02706 Chain length determinant protein CSC00_2071 PF00953 Glycosyl transferase family 4 CSC00_2072 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSC00_2072 PF07498 Rho termination factor, N-terminal domain CSC00_2072 PF07497 Rho termination factor, RNA-binding domain CSC00_2073 PF00085 Thioredoxin CSC00_2074 PF00271 Helicase conserved C-terminal domain CSC00_2074 PF00270 DEAD/DEAH box helicase CSC00_2075 PF02541 Ppx/GppA phosphatase family CSC00_2076 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2076 PF03466 LysR substrate binding domain CSC00_2077 PF01609 Transposase DDE domain CSC00_2077 PF05598 Transposase domain (DUF772) CSC00_2078 PF04474 Protein of unknown function (DUF554) CSC00_2079 PF13361 UvrD-like helicase C-terminal domain CSC00_2079 PF00580 UvrD/REP helicase N-terminal domain CSC00_2083 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CSC00_2083 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CSC00_2084 PF03466 LysR substrate binding domain CSC00_2084 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2085 PF00585 C-terminal regulatory domain of Threonine dehydratase CSC00_2085 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_2086 PF00920 Dehydratase family CSC00_2087 PF01063 Amino-transferase class IV CSC00_2089 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_2089 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_2089 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_2091 PF13335 Magnesium chelatase, subunit ChlI C-terminal CSC00_2091 PF01078 Magnesium chelatase, subunit ChlI CSC00_2092 PF04219 Protein of unknown function, DUF CSC00_2093 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2093 PF03466 LysR substrate binding domain CSC00_2101 PF01177 Asp/Glu/Hydantoin racemase CSC00_2102 PF07715 TonB-dependent Receptor Plug Domain CSC00_2102 PF00593 TonB dependent receptor CSC00_2103 PF05958 tRNA (Uracil-5-)-methyltransferase CSC00_2104 PF07226 Protein of unknown function (DUF1422) CSC00_2105 PF00440 Bacterial regulatory proteins, tetR family CSC00_2106 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_2106 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSC00_2107 PF03466 LysR substrate binding domain CSC00_2107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2108 PF14698 Argininosuccinate lyase C-terminal CSC00_2108 PF00206 Lyase CSC00_2109 PF00696 Amino acid kinase family CSC00_2110 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSC00_2110 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSC00_2111 PF07687 Peptidase dimerisation domain CSC00_2111 PF01546 Peptidase family M20/M25/M40 CSC00_2112 PF00311 Phosphoenolpyruvate carboxylase CSC00_2113 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CSC00_2114 PF12833 Helix-turn-helix domain CSC00_2115 PF00923 Transaldolase/Fructose-6-phosphate aldolase CSC00_2116 PF00465 Iron-containing alcohol dehydrogenase CSC00_2117 PF00892 EamA-like transporter family CSC00_2118 PF02219 Methylenetetrahydrofolate reductase CSC00_2119 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2119 PF03466 LysR substrate binding domain CSC00_2120 PF02627 Carboxymuconolactone decarboxylase family CSC00_2121 PF02872 5'-nucleotidase, C-terminal domain CSC00_2121 PF00149 Calcineurin-like phosphoesterase CSC00_2123 PF00696 Amino acid kinase family CSC00_2123 PF03447 Homoserine dehydrogenase, NAD binding domain CSC00_2123 PF00742 Homoserine dehydrogenase CSC00_2124 PF01053 Cys/Met metabolism PLP-dependent enzyme CSC00_2125 PF01340 Met Apo-repressor, MetJ CSC00_2126 PF01197 Ribosomal protein L31 CSC00_2127 PF00270 DEAD/DEAH box helicase CSC00_2127 PF00271 Helicase conserved C-terminal domain CSC00_2127 PF17764 3′ DNA-binding domain (3′BD) CSC00_2127 PF18074 Primosomal protein N C-terminal domain CSC00_2127 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CSC00_2128 PF00356 Bacterial regulatory proteins, lacI family CSC00_2129 PF05036 Sporulation related domain CSC00_2130 PF00227 Proteasome subunit CSC00_2131 PF10431 C-terminal, D2-small domain, of ClpB protein CSC00_2131 PF07724 AAA domain (Cdc48 subfamily) CSC00_2131 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_2132 PF01040 UbiA prenyltransferase family CSC00_2133 PF03737 Aldolase/RraA CSC00_2134 PF00365 Phosphofructokinase CSC00_2135 PF16916 Dimerisation domain of Zinc Transporter CSC00_2135 PF01545 Cation efflux family CSC00_2136 PF07813 LTXXQ motif family protein CSC00_2137 PF00486 Transcriptional regulatory protein, C terminal CSC00_2137 PF00072 Response regulator receiver domain CSC00_2138 PF16527 Two-component sensor protein CpxA, periplasmic domain CSC00_2138 PF00512 His Kinase A (phospho-acceptor) domain CSC00_2138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2138 PF00672 HAMP domain CSC00_2139 PF03475 3-alpha domain CSC00_2139 PF03473 MOSC domain CSC00_2140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CSC00_2140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CSC00_2141 PF06379 L-rhamnose-proton symport protein (RhaT) CSC00_2142 PF12833 Helix-turn-helix domain CSC00_2142 PF02311 AraC-like ligand binding domain CSC00_2143 PF02311 AraC-like ligand binding domain CSC00_2143 PF12833 Helix-turn-helix domain CSC00_2144 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_2144 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_2145 PF06134 L-rhamnose isomerase (RhaA) CSC00_2146 PF00596 Class II Aldolase and Adducin N-terminal domain CSC00_2147 PF13407 Periplasmic binding protein domain CSC00_2148 PF00005 ABC transporter CSC00_2149 PF02653 Branched-chain amino acid transport system / permease component CSC00_2150 PF02653 Branched-chain amino acid transport system / permease component CSC00_2151 PF00465 Iron-containing alcohol dehydrogenase CSC00_2152 PF05336 L-rhamnose mutarotase CSC00_2153 PF01306 LacY proton/sugar symporter CSC00_2154 PF16874 Glycosyl hydrolase family 36 C-terminal domain CSC00_2154 PF16875 Glycosyl hydrolase family 36 N-terminal domain CSC00_2155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSC00_2155 PF00356 Bacterial regulatory proteins, lacI family CSC00_2160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_2162 PF01116 Fructose-bisphosphate aldolase class-II CSC00_2163 PF03611 PTS system sugar-specific permease component CSC00_2165 PF00365 Phosphofructokinase CSC00_2167 PF02634 FdhD/NarQ family CSC00_2168 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_2168 PF01568 Molydopterin dinucleotide binding domain CSC00_2168 PF00384 Molybdopterin oxidoreductase CSC00_2169 PF00384 Molybdopterin oxidoreductase CSC00_2169 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_2169 PF01568 Molydopterin dinucleotide binding domain CSC00_2170 PF09163 Formate dehydrogenase N, transmembrane CSC00_2170 PF13247 4Fe-4S dicluster domain CSC00_2171 PF01292 Prokaryotic cytochrome b561 CSC00_2172 PF04216 Protein involved in formate dehydrogenase formation CSC00_2175 PF07859 alpha/beta hydrolase fold CSC00_2176 PF00583 Acetyltransferase (GNAT) family CSC00_2176 PF09500 Putative thioesterase (yiiD_Cterm) CSC00_2177 PF02580 D-Tyr-tRNA(Tyr) deacylase CSC00_2178 PF03631 Virulence factor BrkB CSC00_2179 PF13419 Haloacid dehalogenase-like hydrolase CSC00_2182 PF00120 Glutamine synthetase, catalytic domain CSC00_2182 PF03951 Glutamine synthetase, beta-Grasp domain CSC00_2183 PF00989 PAS fold CSC00_2183 PF00512 His Kinase A (phospho-acceptor) domain CSC00_2183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2184 PF00158 Sigma-54 interaction domain CSC00_2184 PF02954 Bacterial regulatory protein, Fis family CSC00_2184 PF00072 Response regulator receiver domain CSC00_2185 PF04055 Radical SAM superfamily CSC00_2185 PF06969 HemN C-terminal domain CSC00_2186 PF04220 Der GTPase activator (YihI) CSC00_2187 PF01926 50S ribosome-binding GTPase CSC00_2189 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CSC00_2189 PF01367 5'-3' exonuclease, C-terminal SAM fold CSC00_2189 PF00476 DNA polymerase family A CSC00_2189 PF01612 3'-5' exonuclease CSC00_2190 PF01553 Acyltransferase CSC00_2191 PF01323 DSBA-like thioredoxin domain CSC00_2192 PF01636 Phosphotransferase enzyme family CSC00_2193 PF06288 Protein of unknown function (DUF1040) CSC00_2194 PF12804 MobA-like NTP transferase domain CSC00_2195 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CSC00_2200 PF00392 Bacterial regulatory proteins, gntR family CSC00_2200 PF07729 FCD domain CSC00_2201 PF07690 Major Facilitator Superfamily CSC00_2202 PF00356 Bacterial regulatory proteins, lacI family CSC00_2203 PF00294 pfkB family carbohydrate kinase CSC00_2204 PF13407 Periplasmic binding protein domain CSC00_2205 PF02653 Branched-chain amino acid transport system / permease component CSC00_2206 PF00005 ABC transporter CSC00_2207 PF05025 RbsD / FucU transport protein family CSC00_2208 PF02705 K+ potassium transporter CSC00_2209 PF07728 AAA domain (dynein-related subfamily) CSC00_2209 PF12592 Protein of unknown function (DUF3763) CSC00_2209 PF17868 AAA lid domain CSC00_2210 PF05762 VWA domain containing CoxE-like protein CSC00_2211 PF03590 Aspartate-ammonia ligase CSC00_2212 PF01037 Lrp/AsnC ligand binding domain CSC00_2213 PF00258 Flavodoxin CSC00_2214 PF01134 Glucose inhibited division protein A CSC00_2214 PF13932 GidA associated domain CSC00_2215 PF02527 rRNA small subunit methyltransferase G CSC00_2216 PF03899 ATP synthase I chain CSC00_2217 PF00119 ATP synthase A chain CSC00_2218 PF00137 ATP synthase subunit C CSC00_2219 PF00430 ATP synthase B/B' CF(0) CSC00_2220 PF00213 ATP synthase delta (OSCP) subunit CSC00_2221 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSC00_2221 PF02874 ATP synthase alpha/beta family, beta-barrel domain CSC00_2221 PF00306 ATP synthase alpha/beta chain, C terminal domain CSC00_2222 PF00231 ATP synthase CSC00_2223 PF02874 ATP synthase alpha/beta family, beta-barrel domain CSC00_2223 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSC00_2224 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CSC00_2224 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CSC00_2227 PF12804 MobA-like NTP transferase domain CSC00_2227 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_2228 PF01380 SIS domain CSC00_2229 PF12849 PBP superfamily domain CSC00_2230 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2231 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2232 PF00005 ABC transporter CSC00_2233 PF01895 PhoU domain CSC00_2235 PF02264 LamB porin CSC00_2235 PF11471 Maltoporin periplasmic N-terminal extension CSC00_2236 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSC00_2236 PF00756 Putative esterase CSC00_2237 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CSC00_2238 PF13419 Haloacid dehalogenase-like hydrolase CSC00_2240 PF00860 Permease family CSC00_2241 PF03358 NADPH-dependent FMN reductase CSC00_2243 PF03466 LysR substrate binding domain CSC00_2243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2244 PF07690 Major Facilitator Superfamily CSC00_2246 PF12631 MnmE helical domain CSC00_2246 PF01926 50S ribosome-binding GTPase CSC00_2246 PF10396 GTP-binding protein TrmE N-terminus CSC00_2247 PF14849 YidC periplasmic domain CSC00_2247 PF02096 60Kd inner membrane protein CSC00_2248 PF00825 Ribonuclease P CSC00_2249 PF00468 Ribosomal protein L34 CSC00_2250 PF00308 Bacterial dnaA protein CSC00_2250 PF08299 Bacterial dnaA protein helix-turn-helix CSC00_2250 PF11638 DnaA N-terminal domain CSC00_2251 PF00712 DNA polymerase III beta subunit, N-terminal domain CSC00_2251 PF02768 DNA polymerase III beta subunit, C-terminal domain CSC00_2251 PF02767 DNA polymerase III beta subunit, central domain CSC00_2252 PF02463 RecF/RecN/SMC N terminal domain CSC00_2253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2253 PF00204 DNA gyrase B CSC00_2253 PF01751 Toprim domain CSC00_2253 PF00986 DNA gyrase B subunit, carboxyl terminus CSC00_2253 PF18053 DNA gyrase B subunit insert domain CSC00_2257 PF00392 Bacterial regulatory proteins, gntR family CSC00_2257 PF07729 FCD domain CSC00_2258 PF05035 2-keto-3-deoxy-galactonokinase CSC00_2259 PF01081 KDPG and KHG aldolase CSC00_2260 PF13378 Enolase C-terminal domain-like CSC00_2260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSC00_2262 PF07690 Major Facilitator Superfamily CSC00_2263 PF12566 Protein of unknown function (DUF3748) CSC00_2263 PF07676 WD40-like Beta Propeller Repeat CSC00_2264 PF07119 Protein of unknown function (DUF1375) CSC00_2265 PF00011 Hsp20/alpha crystallin family CSC00_2266 PF00011 Hsp20/alpha crystallin family CSC00_2268 PF02080 TrkA-C domain CSC00_2268 PF06826 Predicted Permease Membrane Region CSC00_2269 PF00392 Bacterial regulatory proteins, gntR family CSC00_2269 PF07702 UTRA domain CSC00_2270 PF02378 Phosphotransferase system, EIIC CSC00_2270 PF00367 phosphotransferase system, EIIB CSC00_2271 PF02056 Family 4 glycosyl hydrolase CSC00_2271 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSC00_2272 PF02656 Domain of unknown function (DUF202) CSC00_2273 PF02656 Domain of unknown function (DUF202) CSC00_2275 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_2276 PF02447 GntP family permease CSC00_2277 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2277 PF03466 LysR substrate binding domain CSC00_2278 PF07690 Major Facilitator Superfamily CSC00_2282 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_2282 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_2282 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_2283 PF01842 ACT domain CSC00_2284 PF00072 Response regulator receiver domain CSC00_2284 PF00196 Bacterial regulatory proteins, luxR family CSC00_2285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2285 PF07730 Histidine kinase CSC00_2285 PF05231 MASE1 CSC00_2286 PF07690 Major Facilitator Superfamily CSC00_2287 PF07690 Major Facilitator Superfamily CSC00_2288 PF06711 Protein of unknown function (DUF1198) CSC00_2291 PF07690 Major Facilitator Superfamily CSC00_2293 PF00266 Aminotransferase class-V CSC00_2294 PF00392 Bacterial regulatory proteins, gntR family CSC00_2294 PF07702 UTRA domain CSC00_2295 PF01547 Bacterial extracellular solute-binding protein CSC00_2296 PF08402 TOBE domain CSC00_2296 PF00005 ABC transporter CSC00_2297 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2298 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2299 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2300 PF02264 LamB porin CSC00_2301 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSC00_2302 PF02378 Phosphotransferase system, EIIC CSC00_2302 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_2303 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_2304 PF00356 Bacterial regulatory proteins, lacI family CSC00_2305 PF07690 Major Facilitator Superfamily CSC00_2306 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CSC00_2306 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CSC00_2307 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2307 PF03466 LysR substrate binding domain CSC00_2308 PF02585 GlcNAc-PI de-N-acetylase CSC00_2309 PF03737 Aldolase/RraA CSC00_2310 PF04303 PrpF protein CSC00_2313 PF00892 EamA-like transporter family CSC00_2314 PF02378 Phosphotransferase system, EIIC CSC00_2314 PF00367 phosphotransferase system, EIIB CSC00_2315 PF13580 SIS domain CSC00_2316 PF07690 Major Facilitator Superfamily CSC00_2317 PF02321 Outer membrane efflux protein CSC00_2318 PF00873 AcrB/AcrD/AcrF family CSC00_2319 PF00529 HlyD membrane-fusion protein of T1SS CSC00_2319 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_2323 PF00583 Acetyltransferase (GNAT) family CSC00_2325 PF00440 Bacterial regulatory proteins, tetR family CSC00_2326 PF07690 Major Facilitator Superfamily CSC00_2327 PF03466 LysR substrate binding domain CSC00_2327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2331 PF12833 Helix-turn-helix domain CSC00_2332 PF03180 NLPA lipoprotein CSC00_2334 PF00293 NUDIX domain CSC00_2335 PF12706 Beta-lactamase superfamily domain CSC00_2336 PF01965 DJ-1/PfpI family CSC00_2337 PF00107 Zinc-binding dehydrogenase CSC00_2337 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_2340 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_2340 PF00107 Zinc-binding dehydrogenase CSC00_2344 PF13802 Galactose mutarotase-like CSC00_2344 PF01055 Glycosyl hydrolases family 31 CSC00_2346 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSC00_2346 PF02056 Family 4 glycosyl hydrolase CSC00_2347 PF02378 Phosphotransferase system, EIIC CSC00_2347 PF00367 phosphotransferase system, EIIB CSC00_2348 PF05170 AsmA family CSC00_2349 PF00860 Permease family CSC00_2351 PF03616 Sodium/glutamate symporter CSC00_2352 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_2352 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_2353 PF00230 Major intrinsic protein CSC00_2354 PF06005 Cell division protein ZapB CSC00_2356 PF02611 CDP-diacylglycerol pyrophosphatase CSC00_2358 PF00121 Triosephosphate isomerase CSC00_2359 PF07305 Protein of unknown function (DUF1454) CSC00_2360 PF05656 Protein of unknown function (DUF805) CSC00_2361 PF00175 Oxidoreductase NAD-binding domain CSC00_2361 PF00970 Oxidoreductase FAD-binding domain CSC00_2362 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CSC00_2363 PF17191 RecG wedge domain CSC00_2363 PF00270 DEAD/DEAH box helicase CSC00_2363 PF00271 Helicase conserved C-terminal domain CSC00_2364 PF12105 SpoU, rRNA methylase, C-terminal CSC00_2364 PF00588 SpoU rRNA Methylase family CSC00_2365 PF13291 ACT domain CSC00_2365 PF04607 Region found in RelA / SpoT proteins CSC00_2365 PF02824 TGS domain CSC00_2366 PF01192 RNA polymerase Rpb6 CSC00_2367 PF00625 Guanylate kinase CSC00_2368 PF03120 NAD-dependent DNA ligase OB-fold domain CSC00_2368 PF01653 NAD-dependent DNA ligase adenylation domain CSC00_2369 PF03458 UPF0126 domain CSC00_2371 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CSC00_2371 PF12833 Helix-turn-helix domain CSC00_2371 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSC00_2371 PF02805 Metal binding domain of Ada CSC00_2374 PF08340 Domain of unknown function (DUF1732) CSC00_2374 PF03755 YicC-like family, N-terminal region CSC00_2379 PF00005 ABC transporter CSC00_2380 PF01609 Transposase DDE domain CSC00_2380 PF05598 Transposase domain (DUF772) CSC00_2383 PF01138 3' exoribonuclease family, domain 1 CSC00_2383 PF03725 3' exoribonuclease family, domain 2 CSC00_2384 PF00156 Phosphoribosyl transferase domain CSC00_2385 PF00440 Bacterial regulatory proteins, tetR family CSC00_2386 PF00692 dUTPase CSC00_2387 PF04127 DNA / pantothenate metabolism flavoprotein CSC00_2387 PF02441 Flavoprotein CSC00_2388 PF04002 RadC-like JAB domain CSC00_2389 PF00830 Ribosomal L28 family CSC00_2390 PF00471 Ribosomal protein L33 CSC00_2391 PF06827 Zinc finger found in FPG and IleRS CSC00_2391 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CSC00_2391 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CSC00_2392 PF01467 Cytidylyltransferase-like CSC00_2393 PF00535 Glycosyl transferase family 2 CSC00_2394 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CSC00_2395 PF00535 Glycosyl transferase family 2 CSC00_2396 PF13439 Glycosyltransferase Family 4 CSC00_2396 PF00534 Glycosyl transferases group 1 CSC00_2397 PF00534 Glycosyl transferases group 1 CSC00_2397 PF13439 Glycosyltransferase Family 4 CSC00_2398 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CSC00_2401 PF04932 O-Antigen ligase CSC00_2403 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CSC00_2404 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CSC00_2405 PF01370 NAD dependent epimerase/dehydratase family CSC00_2406 PF00155 Aminotransferase class I and II CSC00_2407 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_2407 PF00107 Zinc-binding dehydrogenase CSC00_2409 PF04748 Divergent polysaccharide deacetylase CSC00_2410 PF01551 Peptidase family M23 CSC00_2411 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CSC00_2411 PF01676 Metalloenzyme superfamily CSC00_2412 PF00581 Rhodanese-like domain CSC00_2413 PF00462 Glutaredoxin CSC00_2414 PF02556 Preprotein translocase subunit SecB CSC00_2415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CSC00_2415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CSC00_2416 PF06426 Serine acetyltransferase, N-terminal CSC00_2416 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_2417 PF00588 SpoU rRNA Methylase family CSC00_2418 PF01070 FMN-dependent dehydrogenase CSC00_2419 PF00392 Bacterial regulatory proteins, gntR family CSC00_2419 PF07729 FCD domain CSC00_2420 PF02652 L-lactate permease CSC00_2421 PF10928 Protein of unknown function (DUF2810) CSC00_2423 PF05068 Mannitol repressor CSC00_2424 PF08125 Mannitol dehydrogenase C-terminal domain CSC00_2424 PF01232 Mannitol dehydrogenase Rossmann domain CSC00_2425 PF02378 Phosphotransferase system, EIIC CSC00_2425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_2425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_2426 PF11742 Protein of unknown function (DUF3302) CSC00_2427 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_2427 PF00529 HlyD membrane-fusion protein of T1SS CSC00_2428 PF13417 Glutathione S-transferase, N-terminal domain CSC00_2428 PF00043 Glutathione S-transferase, C-terminal domain CSC00_2429 PF03841 L-seryl-tRNA selenium transferase CSC00_2429 PF12390 Selenocysteine synthase N terminal CSC00_2430 PF09107 Elongation factor SelB, winged helix CSC00_2430 PF09106 Elongation factor SelB, winged helix CSC00_2430 PF03144 Elongation factor Tu domain 2 CSC00_2430 PF00009 Elongation factor Tu GTP binding domain CSC00_2431 PF12800 4Fe-4S binding domain CSC00_2431 PF13247 4Fe-4S dicluster domain CSC00_2432 PF00155 Aminotransferase class I and II CSC00_2433 PF00128 Alpha amylase, catalytic domain CSC00_2434 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CSC00_2435 PF12833 Helix-turn-helix domain CSC00_2436 PF02653 Branched-chain amino acid transport system / permease component CSC00_2437 PF00005 ABC transporter CSC00_2438 PF13407 Periplasmic binding protein domain CSC00_2440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_2440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_2441 PF05360 yiaA/B two helix domain CSC00_2442 PF05360 yiaA/B two helix domain CSC00_2443 PF01757 Acyltransferase family CSC00_2444 PF13983 YsaB-like lipoprotein CSC00_2445 PF02091 Glycyl-tRNA synthetase alpha subunit CSC00_2446 PF05746 DALR anticodon binding domain CSC00_2446 PF02092 Glycyl-tRNA synthetase beta subunit CSC00_2448 PF01848 Hok/gef family CSC00_2449 PF00005 ABC transporter CSC00_2449 PF12848 ABC transporter CSC00_2450 PF00313 'Cold-shock' DNA-binding domain CSC00_2451 PF01381 Helix-turn-helix CSC00_2452 PF07690 Major Facilitator Superfamily CSC00_2453 PF11254 Protein of unknown function (DUF3053) CSC00_2454 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSC00_2454 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_2455 PF07690 Major Facilitator Superfamily CSC00_2456 PF00294 pfkB family carbohydrate kinase CSC00_2458 PF00356 Bacterial regulatory proteins, lacI family CSC00_2460 PF00691 OmpA family CSC00_2460 PF13488 Glycine zipper CSC00_2461 PF01568 Molydopterin dinucleotide binding domain CSC00_2461 PF18364 Molybdopterin oxidoreductase N-terminal domain CSC00_2461 PF00384 Molybdopterin oxidoreductase CSC00_2462 PF00583 Acetyltransferase (GNAT) family CSC00_2463 PF03352 Methyladenine glycosylase CSC00_2464 PF03797 Autotransporter beta-domain CSC00_2465 PF07690 Major Facilitator Superfamily CSC00_2466 PF08019 Phosphoethanolamine transferase EptA/EptB CSC00_2466 PF00884 Sulfatase CSC00_2470 PF13276 HTH-like domain CSC00_2470 PF13333 Integrase core domain CSC00_2470 PF00665 Integrase core domain CSC00_2471 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_2472 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2473 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2473 PF12911 N-terminal TM domain of oligopeptide transport permease C CSC00_2474 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_2474 PF00005 ABC transporter CSC00_2475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_2475 PF00005 ABC transporter CSC00_2479 PF03170 Bacterial cellulose synthase subunit CSC00_2479 PF07238 PilZ domain CSC00_2479 PF00535 Glycosyl transferase family 2 CSC00_2479 PF03552 Cellulose synthase CSC00_2480 PF03170 Bacterial cellulose synthase subunit CSC00_2481 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CSC00_2483 PF01270 Glycosyl hydrolases family 8 CSC00_2484 PF11658 Cellulose biosynthesis protein BcsG CSC00_2485 PF11120 Cellulose biosynthesis protein BcsF CSC00_2486 PF10995 Cellulose biosynthesis GIL CSC00_2487 PF10945 Cellulose biosynthesis protein BcsR CSC00_2488 PF06564 Cellulose biosynthesis protein BcsQ CSC00_2489 PF00535 Glycosyl transferase family 2 CSC00_2489 PF07238 PilZ domain CSC00_2490 PF03170 Bacterial cellulose synthase subunit CSC00_2491 PF01270 Glycosyl hydrolases family 8 CSC00_2492 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CSC00_2494 PF00990 Diguanylate cyclase, GGDEF domain CSC00_2494 PF17154 Gammaproteobacterial periplasmic sensor domain CSC00_2494 PF00563 EAL domain CSC00_2494 PF00672 HAMP domain CSC00_2495 PF00375 Sodium:dicarboxylate symporter family CSC00_2496 PF05193 Peptidase M16 inactive domain CSC00_2496 PF00675 Insulinase (Peptidase family M16) CSC00_2497 PF00294 pfkB family carbohydrate kinase CSC00_2499 PF05170 AsmA family CSC00_2500 PF07690 Major Facilitator Superfamily CSC00_2500 PF00083 Sugar (and other) transporter CSC00_2501 PF03631 Virulence factor BrkB CSC00_2502 PF03466 LysR substrate binding domain CSC00_2502 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2504 PF13302 Acetyltransferase (GNAT) domain CSC00_2505 PF01204 Trehalase CSC00_2506 PF00465 Iron-containing alcohol dehydrogenase CSC00_2508 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSC00_2508 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_2509 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CSC00_2510 PF01569 PAP2 superfamily CSC00_2511 PF01432 Peptidase family M3 CSC00_2512 PF04445 Putative SAM-dependent methyltransferase CSC00_2513 PF00854 POT family CSC00_2514 PF00582 Universal stress protein family CSC00_2515 PF10625 Universal stress protein B (UspB) CSC00_2516 PF01384 Phosphate transporter family CSC00_2518 PF00571 CBS domain CSC00_2518 PF01769 Divalent cation transporter CSC00_2518 PF03448 MgtE intracellular N domain CSC00_2519 PF08753 NikR C terminal nickel binding domain CSC00_2519 PF01402 Ribbon-helix-helix protein, copG family CSC00_2520 PF00005 ABC transporter CSC00_2521 PF00005 ABC transporter CSC00_2522 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2523 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2524 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_2525 PF03466 LysR substrate binding domain CSC00_2525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2526 PF05870 Phenolic acid decarboxylase (PAD) CSC00_2527 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CSC00_2528 PF00535 Glycosyl transferase family 2 CSC00_2529 PF00551 Formyl transferase CSC00_2529 PF02911 Formyl transferase, C-terminal domain CSC00_2529 PF01370 NAD dependent epimerase/dehydratase family CSC00_2530 PF01522 Polysaccharide deacetylase CSC00_2531 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CSC00_2532 PF00892 EamA-like transporter family CSC00_2534 PF01594 AI-2E family transporter CSC00_2535 PF07690 Major Facilitator Superfamily CSC00_2536 PF08786 DcrB CSC00_2537 PF02592 Putative vitamin uptake transporter CSC00_2538 PF01206 Sulfurtransferase TusA CSC00_2539 PF00403 Heavy-metal-associated domain CSC00_2540 PF07947 YhhN family CSC00_2541 PF10694 Protein of unknown function (DUF2500) CSC00_2542 PF06611 Protein of unknown function (DUF1145) CSC00_2544 PF02881 SRP54-type protein, helical bundle domain CSC00_2544 PF00448 SRP54-type protein, GTPase domain CSC00_2545 PF00005 ABC transporter CSC00_2546 PF18075 FtsX extracellular domain CSC00_2546 PF02687 FtsX-like permease family CSC00_2547 PF04542 Sigma-70 region 2 CSC00_2547 PF04545 Sigma-70, region 4 CSC00_2548 PF00155 Aminotransferase class I and II CSC00_2548 PF00392 Bacterial regulatory proteins, gntR family CSC00_2549 PF00202 Aminotransferase class-III CSC00_2552 PF13458 Periplasmic binding protein CSC00_2553 PF12568 Acetyltransferase (GNAT) domain, PanZ CSC00_2556 PF13458 Periplasmic binding protein CSC00_2557 PF02653 Branched-chain amino acid transport system / permease component CSC00_2558 PF11862 Domain of unknown function (DUF3382) CSC00_2558 PF02653 Branched-chain amino acid transport system / permease component CSC00_2559 PF12399 Branched-chain amino acid ATP-binding cassette transporter CSC00_2559 PF00005 ABC transporter CSC00_2560 PF00005 ABC transporter CSC00_2561 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CSC00_2563 PF13416 Bacterial extracellular solute-binding protein CSC00_2564 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2565 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_2566 PF00005 ABC transporter CSC00_2566 PF17912 MalK OB fold domain CSC00_2567 PF03009 Glycerophosphoryl diester phosphodiesterase family CSC00_2568 PF10956 Protein of unknown function (DUF2756) CSC00_2570 PF00583 Acetyltransferase (GNAT) family CSC00_2572 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_2572 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_2573 PF17954 Quercetinase C-terminal cupin domain CSC00_2573 PF02678 Pirin CSC00_2574 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSC00_2574 PF00356 Bacterial regulatory proteins, lacI family CSC00_2575 PF01202 Shikimate kinase CSC00_2576 PF02447 GntP family permease CSC00_2578 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSC00_2578 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSC00_2579 PF02806 Alpha amylase, C-terminal all-beta domain CSC00_2579 PF00128 Alpha amylase, catalytic domain CSC00_2579 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSC00_2580 PF00128 Alpha amylase, catalytic domain CSC00_2580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSC00_2580 PF18390 Glycogen debranching enzyme C-terminal domain CSC00_2581 PF00483 Nucleotidyl transferase CSC00_2582 PF08323 Starch synthase catalytic domain CSC00_2582 PF00534 Glycosyl transferases group 1 CSC00_2583 PF00343 Carbohydrate phosphorylase CSC00_2585 PF01266 FAD dependent oxidoreductase CSC00_2585 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CSC00_2586 PF00581 Rhodanese-like domain CSC00_2587 PF01694 Rhomboid family CSC00_2587 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CSC00_2588 PF00455 DeoR C terminal sensor domain CSC00_2588 PF08220 DeoR-like helix-turn-helix domain CSC00_2589 PF00196 Bacterial regulatory proteins, luxR family CSC00_2589 PF17874 MalT-like TPR region CSC00_2591 PF00343 Carbohydrate phosphorylase CSC00_2592 PF02446 4-alpha-glucanotransferase CSC00_2593 PF02447 GntP family permease CSC00_2594 PF01106 NifU-like domain CSC00_2594 PF01521 Iron-sulphur cluster biosynthesis CSC00_2595 PF00156 Phosphoribosyl transferase domain CSC00_2596 PF00561 alpha/beta hydrolase fold CSC00_2598 PF09012 FeoC like transcriptional regulator CSC00_2599 PF02421 Ferrous iron transport protein B CSC00_2599 PF17910 FeoB cytosolic helical domain CSC00_2599 PF07670 Nucleoside recognition CSC00_2599 PF07664 Ferrous iron transport protein B C terminus CSC00_2600 PF04023 FeoA domain CSC00_2601 PF17674 HHH domain CSC00_2601 PF00575 S1 RNA binding domain CSC00_2601 PF09371 Tex-like protein N-terminal domain CSC00_2601 PF16921 Tex protein YqgF-like domain CSC00_2602 PF01272 Transcription elongation factor, GreA/GreB, C-term CSC00_2602 PF03449 Transcription elongation factor, N-terminal CSC00_2603 PF00072 Response regulator receiver domain CSC00_2603 PF00486 Transcriptional regulatory protein, C terminal CSC00_2604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2604 PF00672 HAMP domain CSC00_2604 PF00512 His Kinase A (phospho-acceptor) domain CSC00_2605 PF01293 Phosphoenolpyruvate carboxykinase CSC00_2607 PF01430 Hsp33 protein CSC00_2608 PF01479 S4 domain CSC00_2609 PF13419 Haloacid dehalogenase-like hydrolase CSC00_2610 PF07095 Intracellular growth attenuator protein IgaA CSC00_2611 PF00293 NUDIX domain CSC00_2612 PF00912 Transglycosylase CSC00_2612 PF17092 Penicillin-binding protein OB-like domain CSC00_2612 PF00905 Penicillin binding protein transpeptidase domain CSC00_2617 PF00263 Bacterial type II and III secretion system protein CSC00_2617 PF03958 Bacterial type II/III secretion system short domain CSC00_2618 PF01202 Shikimate kinase CSC00_2619 PF01761 3-dehydroquinate synthase CSC00_2620 PF05036 Sporulation related domain CSC00_2621 PF02086 D12 class N6 adenine-specific DNA methyltransferase CSC00_2622 PF00834 Ribulose-phosphate 3 epimerase family CSC00_2623 PF13419 Haloacid dehalogenase-like hydrolase CSC00_2624 PF00579 tRNA synthetases class I (W and Y) CSC00_2625 PF10414 Sirohaem synthase dimerisation region CSC00_2625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSC00_2625 PF14824 Sirohaem biosynthesis protein central CSC00_2626 PF13806 Rieske-like [2Fe-2S] domain CSC00_2627 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_2627 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CSC00_2627 PF04324 BFD-like [2Fe-2S] binding domain CSC00_2627 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CSC00_2627 PF18267 Rubredoxin NAD+ reductase C-terminal domain CSC00_2629 PF07969 Amidohydrolase family CSC00_2630 PF07690 Major Facilitator Superfamily CSC00_2631 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CSC00_2632 PF10832 Protein of unknown function (DUF2559) CSC00_2633 PF02661 Fic/DOC family CSC00_2634 PF00117 Glutamine amidotransferase class-I CSC00_2635 PF00202 Aminotransferase class-III CSC00_2636 PF12805 FUSC-like inner membrane protein yccS CSC00_2637 PF00027 Cyclic nucleotide-binding domain CSC00_2637 PF13545 Crp-like helix-turn-helix domain CSC00_2638 PF02566 OsmC-like protein CSC00_2639 PF00485 Phosphoribulokinase / Uridine kinase family CSC00_2640 PF06794 Uncharacterised protein family (UPF0270) CSC00_2641 PF00561 alpha/beta hydrolase fold CSC00_2642 PF12848 ABC transporter CSC00_2642 PF00005 ABC transporter CSC00_2643 PF02525 Flavodoxin-like fold CSC00_2644 PF02254 TrkA-N domain CSC00_2644 PF00999 Sodium/hydrogen exchanger family CSC00_2645 PF09526 Probable metal-binding protein (DUF2387) CSC00_2646 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSC00_2647 PF04102 SlyX CSC00_2648 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CSC00_2648 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSC00_2649 PF08348 YheO-like PAS domain CSC00_2649 PF13309 HTH domain CSC00_2650 PF02635 DsrE/DsrF-like family CSC00_2651 PF02635 DsrE/DsrF-like family CSC00_2652 PF04077 DsrH like protein CSC00_2653 PF00164 Ribosomal protein S12/S23 CSC00_2654 PF00177 Ribosomal protein S7p/S5e CSC00_2655 PF03764 Elongation factor G, domain IV CSC00_2655 PF00679 Elongation factor G C-terminus CSC00_2655 PF00009 Elongation factor Tu GTP binding domain CSC00_2655 PF03144 Elongation factor Tu domain 2 CSC00_2655 PF14492 Elongation Factor G, domain II CSC00_2656 PF00009 Elongation factor Tu GTP binding domain CSC00_2656 PF03143 Elongation factor Tu C-terminal domain CSC00_2656 PF03144 Elongation factor Tu domain 2 CSC00_2657 PF04324 BFD-like [2Fe-2S] binding domain CSC00_2658 PF00210 Ferritin-like domain CSC00_2659 PF01478 Type IV leader peptidase family CSC00_2660 PF00338 Ribosomal protein S10p/S20e CSC00_2662 PF00297 Ribosomal protein L3 CSC00_2663 PF00573 Ribosomal protein L4/L1 family CSC00_2664 PF00276 Ribosomal protein L23 CSC00_2665 PF00181 Ribosomal Proteins L2, RNA binding domain CSC00_2665 PF03947 Ribosomal Proteins L2, C-terminal domain CSC00_2666 PF00203 Ribosomal protein S19 CSC00_2667 PF00237 Ribosomal protein L22p/L17e CSC00_2668 PF00189 Ribosomal protein S3, C-terminal domain CSC00_2668 PF07650 KH domain CSC00_2669 PF00252 Ribosomal protein L16p/L10e CSC00_2670 PF00831 Ribosomal L29 protein CSC00_2671 PF00366 Ribosomal protein S17 CSC00_2672 PF00238 Ribosomal protein L14p/L23e CSC00_2673 PF00467 KOW motif CSC00_2673 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CSC00_2674 PF00281 Ribosomal protein L5 CSC00_2674 PF00673 ribosomal L5P family C-terminus CSC00_2675 PF00253 Ribosomal protein S14p/S29e CSC00_2676 PF00410 Ribosomal protein S8 CSC00_2677 PF00347 Ribosomal protein L6 CSC00_2678 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CSC00_2679 PF03719 Ribosomal protein S5, C-terminal domain CSC00_2679 PF00333 Ribosomal protein S5, N-terminal domain CSC00_2680 PF00327 Ribosomal protein L30p/L7e CSC00_2681 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CSC00_2682 PF00344 SecY translocase CSC00_2683 PF00416 Ribosomal protein S13/S18 CSC00_2684 PF00411 Ribosomal protein S11 CSC00_2685 PF01479 S4 domain CSC00_2685 PF00163 Ribosomal protein S4/S9 N-terminal domain CSC00_2686 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CSC00_2686 PF01000 RNA polymerase Rpb3/RpoA insert domain CSC00_2686 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CSC00_2687 PF01196 Ribosomal protein L17 CSC00_2688 PF09350 Domain of unknown function (DUF1992) CSC00_2689 PF13411 MerR HTH family regulatory protein CSC00_2690 PF01741 Large-conductance mechanosensitive channel, MscL CSC00_2691 PF02254 TrkA-N domain CSC00_2691 PF02080 TrkA-C domain CSC00_2692 PF01029 NusB family CSC00_2692 PF01189 16S rRNA methyltransferase RsmB/F CSC00_2693 PF02911 Formyl transferase, C-terminal domain CSC00_2693 PF00551 Formyl transferase CSC00_2694 PF01327 Polypeptide deformylase CSC00_2695 PF02481 DNA recombination-mediator protein A CSC00_2695 PF17782 DprA winged helix domain CSC00_2696 PF04361 Protein of unknown function (DUF494) CSC00_2697 PF01396 Topoisomerase DNA binding C4 zinc finger CSC00_2698 PF01300 Telomere recombination CSC00_2699 PF08501 Shikimate dehydrogenase substrate binding domain CSC00_2699 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CSC00_2699 PF01488 Shikimate / quinate 5-dehydrogenase CSC00_2700 PF07369 Protein of unknown function (DUF1488) CSC00_2701 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_2708 PF00873 AcrB/AcrD/AcrF family CSC00_2709 PF00529 HlyD membrane-fusion protein of T1SS CSC00_2709 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_2710 PF08361 MAATS-type transcriptional repressor, C-terminal region CSC00_2710 PF00440 Bacterial regulatory proteins, tetR family CSC00_2711 PF00589 Phage integrase family CSC00_2711 PF13356 Arm DNA-binding domain CSC00_2711 PF14659 Phage integrase, N-terminal SAM-like domain CSC00_2714 PF10548 P22AR C-terminal domain CSC00_2714 PF08346 AntA/AntB antirepressor CSC00_2724 PF13737 Transposase DDE domain CSC00_2733 PF03354 Phage Terminase CSC00_2735 PF02954 Bacterial regulatory protein, Fis family CSC00_2736 PF01207 Dihydrouridine synthase (Dus) CSC00_2739 PF00474 Sodium:solute symporter family CSC00_2740 PF06196 Protein of unknown function (DUF997) CSC00_2741 PF00289 Biotin carboxylase, N-terminal domain CSC00_2741 PF02785 Biotin carboxylase C-terminal domain CSC00_2741 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSC00_2742 PF00364 Biotin-requiring enzyme CSC00_2743 PF01220 Dehydroquinase class II CSC00_2744 PF01794 Ferric reductase like transmembrane component CSC00_2745 PF00174 Oxidoreductase molybdopterin binding domain CSC00_2747 PF00563 EAL domain CSC00_2747 PF17157 Gammaproteobacterial periplasmic sensor domain CSC00_2747 PF00990 Diguanylate cyclase, GGDEF domain CSC00_2749 PF04085 rod shape-determining protein MreC CSC00_2750 PF04093 rod shape-determining protein MreD CSC00_2751 PF02545 Maf-like protein CSC00_2752 PF00575 S1 RNA binding domain CSC00_2752 PF10150 Ribonuclease E/G family CSC00_2753 PF13116 Protein of unknown function CSC00_2753 PF13502 AsmA-like C-terminal region CSC00_2754 PF01523 Putative modulator of DNA gyrase CSC00_2755 PF03466 LysR substrate binding domain CSC00_2755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2756 PF07869 Protein of unknown function (DUF1656) CSC00_2757 PF13533 Biotin-lipoyl like CSC00_2758 PF04632 Fusaric acid resistance protein family CSC00_2759 PF01337 Barstar (barnase inhibitor) CSC00_2760 PF07338 Protein of unknown function (DUF1471) CSC00_2761 PF07338 Protein of unknown function (DUF1471) CSC00_2762 PF02863 Arginine repressor, C-terminal domain CSC00_2762 PF01316 Arginine repressor, DNA binding domain CSC00_2763 PF00056 lactate/malate dehydrogenase, NAD binding domain CSC00_2763 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CSC00_2764 PF13180 PDZ domain CSC00_2765 PF00595 PDZ domain CSC00_2765 PF13180 PDZ domain CSC00_2766 PF06295 Protein of unknown function (DUF1043) CSC00_2767 PF03969 AFG1-like ATPase CSC00_2768 PF00572 Ribosomal protein L13 CSC00_2769 PF00380 Ribosomal protein S9/S16 CSC00_2770 PF02798 Glutathione S-transferase, N-terminal domain CSC00_2770 PF00043 Glutathione S-transferase, C-terminal domain CSC00_2771 PF04386 Stringent starvation protein B CSC00_2772 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CSC00_2773 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_2773 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CSC00_2774 PF00310 Glutamine amidotransferases class-II CSC00_2774 PF04898 Glutamate synthase central domain CSC00_2774 PF01493 GXGXG motif CSC00_2774 PF01645 Conserved region in glutamate synthase CSC00_2775 PF04055 Radical SAM superfamily CSC00_2775 PF16199 Radical_SAM C-terminal domain CSC00_2776 PF07690 Major Facilitator Superfamily CSC00_2777 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_2777 PF00107 Zinc-binding dehydrogenase CSC00_2779 PF03786 D-mannonate dehydratase (UxuA) CSC00_2780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2780 PF01627 Hpt domain CSC00_2780 PF00989 PAS fold CSC00_2780 PF18415 Histidine kinase receptor ArcB trans-membrane domain CSC00_2780 PF00072 Response regulator receiver domain CSC00_2780 PF00512 His Kinase A (phospho-acceptor) domain CSC00_2782 PF00912 Transglycosylase CSC00_2783 PF00381 PTS HPr component phosphorylation site CSC00_2784 PF03668 P-loop ATPase protein family CSC00_2785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_2786 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CSC00_2787 PF04552 Sigma-54, DNA binding domain CSC00_2787 PF04963 Sigma-54 factor, core binding domain CSC00_2787 PF00309 Sigma-54 factor, Activator interacting domain (AID) CSC00_2788 PF12399 Branched-chain amino acid ATP-binding cassette transporter CSC00_2788 PF00005 ABC transporter CSC00_2789 PF03968 OstA-like protein CSC00_2790 PF06835 Lipopolysaccharide-assembly, LptC-related CSC00_2792 PF01380 SIS domain CSC00_2792 PF00571 CBS domain CSC00_2793 PF01699 Sodium/calcium exchanger protein CSC00_2794 PF00005 ABC transporter CSC00_2795 PF02405 Permease MlaE CSC00_2796 PF02470 MlaD protein CSC00_2797 PF05494 MlaC protein CSC00_2798 PF13466 STAS domain CSC00_2799 PF01722 BolA-like protein CSC00_2800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CSC00_2801 PF13693 Winged helix-turn-helix DNA-binding CSC00_2802 PF00348 Polyprenyl synthetase CSC00_2804 PF01016 Ribosomal L27 protein CSC00_2805 PF00892 EamA-like transporter family CSC00_2806 PF01018 GTP1/OBG CSC00_2806 PF01926 50S ribosome-binding GTPase CSC00_2807 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CSC00_2808 PF03449 Transcription elongation factor, N-terminal CSC00_2808 PF01272 Transcription elongation factor, GreA/GreB, C-term CSC00_2809 PF01985 CRS1 / YhbY (CRM) domain CSC00_2810 PF01728 FtsJ-like methyltransferase CSC00_2811 PF06480 FtsH Extracellular CSC00_2811 PF01434 Peptidase family M41 CSC00_2811 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_2811 PF17862 AAA+ lid domain CSC00_2812 PF00809 Pterin binding enzyme CSC00_2813 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSC00_2813 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSC00_2813 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSC00_2813 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSC00_2814 PF03840 Preprotein translocase SecG subunit CSC00_2817 PF07437 YfaZ precursor CSC00_2819 PF15977 Winged helix-turn-helix DNA binding CSC00_2820 PF00764 Arginosuccinate synthase CSC00_2823 PF17384 RimP C-terminal SH3 domain CSC00_2823 PF02576 RimP N-terminal domain CSC00_2824 PF00575 S1 RNA binding domain CSC00_2824 PF08529 NusA N-terminal domain CSC00_2824 PF13184 NusA-like KH domain CSC00_2825 PF04760 Translation initiation factor IF-2, N-terminal region CSC00_2825 PF11987 Translation-initiation factor 2 CSC00_2825 PF08364 Bacterial translation initiation factor IF-2 associated region CSC00_2825 PF00009 Elongation factor Tu GTP binding domain CSC00_2826 PF02033 Ribosome-binding factor A CSC00_2827 PF16198 tRNA pseudouridylate synthase B C-terminal domain CSC00_2827 PF09157 Pseudouridine synthase II TruB, C-terminal CSC00_2827 PF01509 TruB family pseudouridylate synthase (N terminal domain) CSC00_2828 PF00312 Ribosomal protein S15 CSC00_2830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CSC00_2830 PF00575 S1 RNA binding domain CSC00_2830 PF01138 3' exoribonuclease family, domain 1 CSC00_2830 PF00013 KH domain CSC00_2830 PF03725 3' exoribonuclease family, domain 2 CSC00_2831 PF07719 Tetratricopeptide repeat CSC00_2831 PF13181 Tetratricopeptide repeat CSC00_2832 PF12343 Cold shock protein DEAD box A CSC00_2832 PF00271 Helicase conserved C-terminal domain CSC00_2832 PF00270 DEAD/DEAH box helicase CSC00_2832 PF03880 DbpA RNA binding domain CSC00_2833 PF03222 Tryptophan/tyrosine permease family CSC00_2834 PF00296 Luciferase-like monooxygenase CSC00_2838 PF13508 Acetyltransferase (GNAT) domain CSC00_2839 PF01541 GIY-YIG catalytic domain CSC00_2841 PF01965 DJ-1/PfpI family CSC00_2842 PF13460 NAD(P)H-binding CSC00_2843 PF03773 Predicted permease CSC00_2844 PF04972 BON domain CSC00_2845 PF13580 SIS domain CSC00_2846 PF02021 Uncharacterised protein family UPF0102 CSC00_2847 PF04348 LppC putative lipoprotein CSC00_2848 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSC00_2849 PF13784 Fic/DOC family N-terminal CSC00_2849 PF02661 Fic/DOC family CSC00_2850 PF08220 DeoR-like helix-turn-helix domain CSC00_2851 PF00107 Zinc-binding dehydrogenase CSC00_2851 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_2852 PF03611 PTS system sugar-specific permease component CSC00_2853 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_2854 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_2855 PF08013 Tagatose 6 phosphate kinase CSC00_2856 PF00381 PTS HPr component phosphorylation site CSC00_2856 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_2857 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_2857 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_2858 PF00294 pfkB family carbohydrate kinase CSC00_2859 PF01116 Fructose-bisphosphate aldolase class-II CSC00_2861 PF00455 DeoR C terminal sensor domain CSC00_2861 PF08220 DeoR-like helix-turn-helix domain CSC00_2862 PF00294 pfkB family carbohydrate kinase CSC00_2863 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CSC00_2863 PF08666 SAF domain CSC00_2865 PF07690 Major Facilitator Superfamily CSC00_2866 PF03328 HpcH/HpaI aldolase/citrate lyase family CSC00_2867 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSC00_2867 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CSC00_2868 PF02595 Glycerate kinase family CSC00_2873 PF02678 Pirin CSC00_2873 PF17954 Quercetinase C-terminal cupin domain CSC00_2874 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_2874 PF03466 LysR substrate binding domain CSC00_2875 PF05656 Protein of unknown function (DUF805) CSC00_2876 PF13409 Glutathione S-transferase, N-terminal domain CSC00_2877 PF07681 DoxX CSC00_2878 PF13997 YqjK-like protein CSC00_2879 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CSC00_2880 PF05957 Bacterial protein of unknown function (DUF883) CSC00_2881 PF06476 Protein of unknown function (DUF1090) CSC00_2882 PF13721 SecD export protein N-terminal TM region CSC00_2883 PF09335 SNARE associated Golgi protein CSC00_2884 PF07729 FCD domain CSC00_2884 PF00392 Bacterial regulatory proteins, gntR family CSC00_2885 PF07690 Major Facilitator Superfamily CSC00_2886 PF02614 Glucuronate isomerase CSC00_2887 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CSC00_2887 PF08666 SAF domain CSC00_2888 PF10688 Bacterial inner membrane protein CSC00_2889 PF00375 Sodium:dicarboxylate symporter family CSC00_2890 PF03741 Integral membrane protein TerC family CSC00_2891 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_2892 PF01863 Protein of unknown function DUF45 CSC00_2895 PF05175 Methyltransferase small domain CSC00_2896 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSC00_2896 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_2897 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_2897 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_2898 PF04198 Putative sugar-binding domain CSC00_2899 PF00005 ABC transporter CSC00_2900 PF02653 Branched-chain amino acid transport system / permease component CSC00_2901 PF02653 Branched-chain amino acid transport system / permease component CSC00_2902 PF13407 Periplasmic binding protein domain CSC00_2903 PF01791 DeoC/LacD family aldolase CSC00_2904 PF03992 Antibiotic biosynthesis monooxygenase CSC00_2905 PF00202 Aminotransferase class-III CSC00_2906 PF03551 Transcriptional regulator PadR-like family CSC00_2908 PF04954 Siderophore-interacting protein CSC00_2908 PF08021 Siderophore-interacting FAD-binding domain CSC00_2909 PF02734 DAK2 domain CSC00_2909 PF02733 Dak1 domain CSC00_2910 PF00391 PEP-utilising enzyme, mobile domain CSC00_2910 PF00381 PTS HPr component phosphorylation site CSC00_2910 PF03610 PTS system fructose IIA component CSC00_2910 PF05524 PEP-utilising enzyme, N-terminal CSC00_2911 PF02734 DAK2 domain CSC00_2912 PF02733 Dak1 domain CSC00_2914 PF00465 Iron-containing alcohol dehydrogenase CSC00_2915 PF00158 Sigma-54 interaction domain CSC00_2915 PF00989 PAS fold CSC00_2915 PF02954 Bacterial regulatory protein, Fis family CSC00_2916 PF01923 Cobalamin adenosyltransferase CSC00_2917 PF02288 Dehydratase medium subunit CSC00_2918 PF00465 Iron-containing alcohol dehydrogenase CSC00_2919 PF03928 Haem-degrading CSC00_2920 PF02286 Dehydratase large subunit CSC00_2921 PF02288 Dehydratase medium subunit CSC00_2922 PF02287 Dehydratase small subunit CSC00_2923 PF08841 Diol dehydratase reactivase ATPase-like domain CSC00_2923 PF18427 DD-reactivating factor swiveling domain CSC00_2924 PF00230 Major intrinsic protein CSC00_2925 PF06411 HdeA/HdeB family CSC00_2926 PF03729 Short repeat of unknown function (DUF308) CSC00_2927 PF10938 YfdX protein CSC00_2928 PF01627 Hpt domain CSC00_2928 PF00072 Response regulator receiver domain CSC00_2928 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_2928 PF00512 His Kinase A (phospho-acceptor) domain CSC00_2928 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2929 PF00072 Response regulator receiver domain CSC00_2929 PF00196 Bacterial regulatory proteins, luxR family CSC00_2933 PF03167 Uracil DNA glycosylase superfamily CSC00_2934 PF04542 Sigma-70 region 2 CSC00_2934 PF04545 Sigma-70, region 4 CSC00_2934 PF00140 Sigma-70 factor, region 1.2 CSC00_2934 PF03979 Sigma-70 factor, region 1.1 CSC00_2934 PF04546 Sigma-70, non-essential region CSC00_2934 PF04539 Sigma-70 region 3 CSC00_2935 PF01807 CHC2 zinc finger CSC00_2935 PF10410 DnaB-helicase binding domain of primase CSC00_2935 PF08275 DNA primase catalytic core, N-terminal domain CSC00_2935 PF08278 DNA primase DnaG DnaB-binding CSC00_2936 PF01165 Ribosomal protein S21 CSC00_2937 PF00814 Glycoprotease family CSC00_2939 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSC00_2940 PF01730 UreF CSC00_2941 PF05194 UreE urease accessory protein, C-terminal domain CSC00_2941 PF02814 UreE urease accessory protein, N-terminal domain CSC00_2942 PF01979 Amidohydrolase family CSC00_2942 PF00449 Urease alpha-subunit, N-terminal domain CSC00_2943 PF00699 Urease beta subunit CSC00_2944 PF00547 Urease, gamma subunit CSC00_2945 PF01774 UreD urease accessory protein CSC00_2948 PF02660 Glycerol-3-phosphate acyltransferase CSC00_2949 PF02152 Dihydroneopterin aldolase CSC00_2950 PF02673 Bacitracin resistance protein BacA CSC00_2951 PF01743 Poly A polymerase head domain CSC00_2951 PF12627 Probable RNA and SrmB- binding site of polymerase A CSC00_2951 PF01966 HD domain CSC00_2952 PF08239 Bacterial SH3 domain CSC00_2953 PF01928 CYTH domain CSC00_2954 PF08335 GlnD PII-uridylyltransferase CSC00_2954 PF03710 Glutamate-ammonia ligase adenylyltransferase CSC00_2955 PF01467 Cytidylyltransferase-like CSC00_2955 PF00294 pfkB family carbohydrate kinase CSC00_2958 PF04380 Membrane fusogenic activity CSC00_2959 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CSC00_2960 PF02535 ZIP Zinc transporter CSC00_2961 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CSC00_2962 PF03738 Glutathionylspermidine synthase preATP-grasp CSC00_2963 PF06693 Protein of unknown function (DUF1190) CSC00_2964 PF02321 Outer membrane efflux protein CSC00_2965 PF00293 NUDIX domain CSC00_2966 PF06853 Protein of unknown function (DUF1249) CSC00_2967 PF00149 Calcineurin-like phosphoesterase CSC00_2968 PF05728 Uncharacterised protein family (UPF0227) CSC00_2969 PF00986 DNA gyrase B subunit, carboxyl terminus CSC00_2969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2969 PF01751 Toprim domain CSC00_2969 PF00204 DNA gyrase B CSC00_2970 PF03992 Antibiotic biosynthesis monooxygenase CSC00_2971 PF02525 Flavodoxin-like fold CSC00_2972 PF08521 Two-component sensor kinase N-terminal CSC00_2972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_2972 PF00512 His Kinase A (phospho-acceptor) domain CSC00_2973 PF00486 Transcriptional regulatory protein, C terminal CSC00_2973 PF00072 Response regulator receiver domain CSC00_2974 PF04076 Bacterial OB fold (BOF) protein CSC00_2975 PF06445 GyrI-like small molecule binding domain CSC00_2976 PF03989 DNA gyrase C-terminal domain, beta-propeller CSC00_2976 PF00521 DNA gyrase/topoisomerase IV, subunit A CSC00_2977 PF01553 Acyltransferase CSC00_2978 PF07732 Multicopper oxidase CSC00_2978 PF07731 Multicopper oxidase CSC00_2978 PF00394 Multicopper oxidase CSC00_2979 PF08497 Radical SAM N-terminal CSC00_2979 PF11842 Domain of unknown function (DUF3362) CSC00_2979 PF04055 Radical SAM superfamily CSC00_2981 PF00248 Aldo/keto reductase family CSC00_2982 PF00465 Iron-containing alcohol dehydrogenase CSC00_2983 PF12833 Helix-turn-helix domain CSC00_2983 PF06719 AraC-type transcriptional regulator N-terminus CSC00_2984 PF09335 SNARE associated Golgi protein CSC00_2985 PF01053 Cys/Met metabolism PLP-dependent enzyme CSC00_2987 PF01618 MotA/TolQ/ExbB proton channel family CSC00_2988 PF02472 Biopolymer transport protein ExbD/TolR CSC00_2990 PF04616 Glycosyl hydrolases family 43 CSC00_2990 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CSC00_2991 PF03350 Uncharacterized protein family, UPF0114 CSC00_2992 PF01738 Dienelactone hydrolase family CSC00_2993 PF11115 Protein of unknown function (DUF2623) CSC00_2994 PF02798 Glutathione S-transferase, N-terminal domain CSC00_2997 PF05257 CHAP domain CSC00_2997 PF03738 Glutathionylspermidine synthase preATP-grasp CSC00_2998 PF00155 Aminotransferase class I and II CSC00_3002 PF03466 LysR substrate binding domain CSC00_3002 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3003 PF01053 Cys/Met metabolism PLP-dependent enzyme CSC00_3004 PF00571 CBS domain CSC00_3004 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_3009 PF13614 AAA domain CSC00_3011 PF03796 DnaB-like helicase C terminal domain CSC00_3011 PF00772 DnaB-like helicase N terminal domain CSC00_3059 PF13693 Winged helix-turn-helix DNA-binding CSC00_3061 PF00313 'Cold-shock' DNA-binding domain CSC00_3062 PF13693 Winged helix-turn-helix DNA-binding CSC00_3070 PF03230 Antirestriction protein CSC00_3073 PF13362 Toprim domain CSC00_3073 PF08401 Domain of unknown function (DUF1738) CSC00_3073 PF18818 Metallopeptidase superfamily domain CSC00_3075 PF00589 Phage integrase family CSC00_3077 PF04474 Protein of unknown function (DUF554) CSC00_3078 PF01276 Orn/Lys/Arg decarboxylase, major domain CSC00_3078 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CSC00_3078 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CSC00_3079 PF03825 Nucleoside H+ symporter CSC00_3080 PF01464 Transglycosylase SLT domain CSC00_3080 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CSC00_3081 PF04362 Bacterial Fe(2+) trafficking CSC00_3082 PF14815 NUDIX domain CSC00_3082 PF00730 HhH-GPD superfamily base excision DNA repair protein CSC00_3082 PF00633 Helix-hairpin-helix motif CSC00_3082 PF10576 Iron-sulfur binding domain of endonuclease III CSC00_3083 PF02390 Putative methyltransferase CSC00_3084 PF04320 Protein with unknown function (DUF469) CSC00_3085 PF11101 Protein of unknown function (DUF2884) CSC00_3086 PF06969 HemN C-terminal domain CSC00_3086 PF04055 Radical SAM superfamily CSC00_3087 PF01725 Ham1 family CSC00_3088 PF02594 Uncharacterised ACR, YggU family COG1872 CSC00_3089 PF02325 YGGT family CSC00_3090 PF01168 Alanine racemase, N-terminal domain CSC00_3091 PF00437 Type II/IV secretion system protein CSC00_3093 PF00196 Bacterial regulatory proteins, luxR family CSC00_3094 PF03652 Holliday junction resolvase CSC00_3095 PF02622 Uncharacterized ACR, COG1678 CSC00_3096 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CSC00_3096 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CSC00_3097 PF04452 RNA methyltransferase CSC00_3098 PF04231 Endonuclease I CSC00_3099 PF17283 SprT-like zinc ribbon domain CSC00_3099 PF10263 SprT-like family CSC00_3100 PF00083 Sugar (and other) transporter CSC00_3101 PF00438 S-adenosylmethionine synthetase, N-terminal domain CSC00_3101 PF02772 S-adenosylmethionine synthetase, central domain CSC00_3101 PF02773 S-adenosylmethionine synthetase, C-terminal domain CSC00_3104 PF17810 Arginine decarboxylase helical bundle domain CSC00_3104 PF17944 Arginine decarboxylase C-terminal helical extension CSC00_3104 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CSC00_3105 PF00491 Arginase family CSC00_3107 PF00355 Rieske [2Fe-2S] domain CSC00_3109 PF00355 Rieske [2Fe-2S] domain CSC00_3111 PF09339 IclR helix-turn-helix domain CSC00_3111 PF01614 Bacterial transcriptional regulator CSC00_3113 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_3113 PF14759 Reductase C-terminal CSC00_3116 PF12697 Alpha/beta hydrolase family CSC00_3118 PF01958 Domain of unknown function DUF108 CSC00_3118 PF03447 Homoserine dehydrogenase, NAD binding domain CSC00_3119 PF00171 Aldehyde dehydrogenase family CSC00_3120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_3120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_3120 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_3121 PF03573 outer membrane porin, OprD family CSC00_3122 PF01435 Peptidase family M48 CSC00_3123 PF02780 Transketolase, C-terminal domain CSC00_3123 PF02779 Transketolase, pyrimidine binding domain CSC00_3123 PF00456 Transketolase, thiamine diphosphate binding domain CSC00_3124 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSC00_3124 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSC00_3125 PF00162 Phosphoglycerate kinase CSC00_3126 PF01116 Fructose-bisphosphate aldolase class-II CSC00_3127 PF05552 Conserved TM helix CSC00_3127 PF00924 Mechanosensitive ion channel CSC00_3128 PF01810 LysE type translocator CSC00_3129 PF04402 Protein of unknown function (DUF541) CSC00_3130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3130 PF03466 LysR substrate binding domain CSC00_3131 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CSC00_3133 PF01842 ACT domain CSC00_3133 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSC00_3133 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_3134 PF01812 5-formyltetrahydrofolate cyclo-ligase family CSC00_3135 PF05164 Cell division protein ZapA CSC00_3136 PF03695 Uncharacterised protein family (UPF0149) CSC00_3137 PF00557 Metallopeptidase family M24 CSC00_3137 PF05195 Aminopeptidase P, N-terminal domain CSC00_3138 PF01494 FAD binding domain CSC00_3139 PF01494 FAD binding domain CSC00_3140 PF08669 Glycine cleavage T-protein C-terminal barrel domain CSC00_3140 PF01571 Aminomethyltransferase folate-binding domain CSC00_3141 PF01597 Glycine cleavage H-protein CSC00_3142 PF02347 Glycine cleavage system P-protein CSC00_3144 PF00578 AhpC/TSA family CSC00_3149 PF00232 Glycosyl hydrolase family 1 CSC00_3150 PF01418 Helix-turn-helix domain, rpiR family CSC00_3150 PF01380 SIS domain CSC00_3152 PF03006 Haemolysin-III related CSC00_3153 PF01571 Aminomethyltransferase folate-binding domain CSC00_3154 PF03937 Flavinator of succinate dehydrogenase CSC00_3155 PF07254 Membrane-bound toxin component of toxin-antitoxin system CSC00_3156 PF00258 Flavodoxin CSC00_3157 PF00589 Phage integrase family CSC00_3157 PF02899 Phage integrase, N-terminal SAM-like domain CSC00_3158 PF10411 Disulfide bond isomerase protein N-terminus CSC00_3158 PF13098 Thioredoxin-like domain CSC00_3159 PF17768 RecJ OB domain CSC00_3159 PF01368 DHH family CSC00_3159 PF02272 DHHA1 domain CSC00_3160 PF00472 RF-1 domain CSC00_3160 PF03462 PCRF domain CSC00_3161 PF01336 OB-fold nucleic acid binding domain CSC00_3161 PF00152 tRNA synthetases class II (D, K and N) CSC00_3162 PF00293 NUDIX domain CSC00_3164 PF01476 LysM domain CSC00_3164 PF01551 Peptidase family M23 CSC00_3166 PF07690 Major Facilitator Superfamily CSC00_3167 PF03466 LysR substrate binding domain CSC00_3167 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3169 PF00248 Aldo/keto reductase family CSC00_3170 PF02525 Flavodoxin-like fold CSC00_3172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3172 PF03466 LysR substrate binding domain CSC00_3175 PF01022 Bacterial regulatory protein, arsR family CSC00_3176 PF02040 Arsenical pump membrane protein CSC00_3177 PF03960 ArsC family CSC00_3178 PF00854 POT family CSC00_3179 PF08986 Domain of unknown function (DUF1889) CSC00_3180 PF02321 Outer membrane efflux protein CSC00_3181 PF04632 Fusaric acid resistance protein family CSC00_3182 PF00529 HlyD membrane-fusion protein of T1SS CSC00_3182 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_3183 PF17090 Uncharacterised protein family CSC00_3184 PF06902 Divergent 4Fe-4S mono-cluster CSC00_3185 PF14542 GCN5-related N-acetyl-transferase CSC00_3187 PF00419 Fimbrial protein CSC00_3187 PF09160 FimH, mannose binding CSC00_3189 PF00419 Fimbrial protein CSC00_3190 PF13953 PapC C-terminal domain CSC00_3190 PF13954 PapC N-terminal domain CSC00_3190 PF00577 Outer membrane usher protein CSC00_3191 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_3191 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_3192 PF00419 Fimbrial protein CSC00_3193 PF00419 Fimbrial protein CSC00_3195 PF00589 Phage integrase family CSC00_3196 PF05598 Transposase domain (DUF772) CSC00_3196 PF01609 Transposase DDE domain CSC00_3197 PF00589 Phage integrase family CSC00_3199 PF00589 Phage integrase family CSC00_3201 PF03824 High-affinity nickel-transport protein CSC00_3202 PF01047 MarR family CSC00_3203 PF00892 EamA-like transporter family CSC00_3205 PF05598 Transposase domain (DUF772) CSC00_3205 PF01609 Transposase DDE domain CSC00_3207 PF00419 Fimbrial protein CSC00_3208 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_3208 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_3209 PF00577 Outer membrane usher protein CSC00_3209 PF13953 PapC C-terminal domain CSC00_3209 PF13954 PapC N-terminal domain CSC00_3210 PF00419 Fimbrial protein CSC00_3213 PF00196 Bacterial regulatory proteins, luxR family CSC00_3213 PF00072 Response regulator receiver domain CSC00_3215 PF00248 Aldo/keto reductase family CSC00_3216 PF03222 Tryptophan/tyrosine permease family CSC00_3218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3218 PF03466 LysR substrate binding domain CSC00_3219 PF02803 Thiolase, C-terminal domain CSC00_3219 PF00108 Thiolase, N-terminal domain CSC00_3220 PF06178 Oligogalacturonate-specific porin protein (KdgM) CSC00_3221 PF14583 Oligogalacturonate lyase CSC00_3224 PF00083 Sugar (and other) transporter CSC00_3225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSC00_3225 PF00356 Bacterial regulatory proteins, lacI family CSC00_3227 PF01306 LacY proton/sugar symporter CSC00_3228 PF00251 Glycosyl hydrolases family 32 N-terminal domain CSC00_3228 PF08244 Glycosyl hydrolases family 32 C terminal CSC00_3231 PF00005 ABC transporter CSC00_3231 PF17912 MalK OB fold domain CSC00_3232 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3233 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3234 PF16867 Dimethlysulfonioproprionate lyase CSC00_3235 PF01177 Asp/Glu/Hydantoin racemase CSC00_3236 PF03466 LysR substrate binding domain CSC00_3236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3237 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CSC00_3237 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CSC00_3238 PF00356 Bacterial regulatory proteins, lacI family CSC00_3239 PF02378 Phosphotransferase system, EIIC CSC00_3240 PF00232 Glycosyl hydrolase family 1 CSC00_3241 PF00392 Bacterial regulatory proteins, gntR family CSC00_3241 PF07729 FCD domain CSC00_3243 PF00356 Bacterial regulatory proteins, lacI family CSC00_3245 PF01553 Acyltransferase CSC00_3245 PF00501 AMP-binding enzyme CSC00_3246 PF07690 Major Facilitator Superfamily CSC00_3247 PF00248 Aldo/keto reductase family CSC00_3249 PF06004 Bacterial protein of unknown function (DUF903) CSC00_3250 PF03741 Integral membrane protein TerC family CSC00_3251 PF02976 DNA mismatch repair enzyme MutH CSC00_3253 PF00293 NUDIX domain CSC00_3254 PF01590 GAF domain CSC00_3254 PF00391 PEP-utilising enzyme, mobile domain CSC00_3254 PF02896 PEP-utilising enzyme, TIM barrel domain CSC00_3254 PF05524 PEP-utilising enzyme, N-terminal CSC00_3255 PF01790 Prolipoprotein diacylglyceryl transferase CSC00_3256 PF00303 Thymidylate synthase CSC00_3257 PF07963 Prokaryotic N-terminal methylation motif CSC00_3258 PF07963 Prokaryotic N-terminal methylation motif CSC00_3259 PF10713 Protein of unknown function (DUF2509) CSC00_3260 PF07963 Prokaryotic N-terminal methylation motif CSC00_3260 PF12528 Type II secretion prepilin peptidase dependent protein C CSC00_3261 PF17946 RecC C-terminal domain CSC00_3262 PF16187 Middle or third domain of peptidase_M16 CSC00_3262 PF00675 Insulinase (Peptidase family M16) CSC00_3262 PF05193 Peptidase M16 inactive domain CSC00_3263 PF00580 UvrD/REP helicase N-terminal domain CSC00_3263 PF12705 PD-(D/E)XK nuclease superfamily CSC00_3263 PF13361 UvrD-like helicase C-terminal domain CSC00_3264 PF13538 UvrD-like helicase C-terminal domain CSC00_3266 PF00583 Acetyltransferase (GNAT) family CSC00_3266 PF00696 Amino acid kinase family CSC00_3267 PF01520 N-acetylmuramoyl-L-alanine amidase CSC00_3267 PF11741 AMIN domain CSC00_3268 PF00155 Aminotransferase class I and II CSC00_3269 PF00288 GHMP kinases N terminal domain CSC00_3270 PF00871 Acetokinase family CSC00_3271 PF10662 Ethanolamine utilisation - propanediol utilisation CSC00_3272 PF00936 BMC domain CSC00_3274 PF10531 SLBB domain CSC00_3274 PF13237 4Fe-4S dicluster domain CSC00_3274 PF13375 RnfC Barrel sandwich hybrid domain CSC00_3274 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CSC00_3275 PF00171 Aldehyde dehydrogenase family CSC00_3275 PF00465 Iron-containing alcohol dehydrogenase CSC00_3276 PF00171 Aldehyde dehydrogenase family CSC00_3277 PF01923 Cobalamin adenosyltransferase CSC00_3278 PF03319 Ethanolamine utilisation protein EutN/carboxysome CSC00_3280 PF06130 Phosphate propanoyltransferase CSC00_3282 PF00936 BMC domain CSC00_3284 PF08841 Diol dehydratase reactivase ATPase-like domain CSC00_3284 PF18427 DD-reactivating factor swiveling domain CSC00_3285 PF02287 Dehydratase small subunit CSC00_3286 PF02288 Dehydratase medium subunit CSC00_3287 PF02286 Dehydratase large subunit CSC00_3288 PF00936 BMC domain CSC00_3289 PF00936 BMC domain CSC00_3291 PF00230 Major intrinsic protein CSC00_3292 PF10114 Sensory domain found in PocR CSC00_3292 PF12833 Helix-turn-helix domain CSC00_3293 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CSC00_3293 PF07685 CobB/CobQ-like glutamine amidotransferase domain CSC00_3294 PF03186 CobD/Cbib protein CSC00_3295 PF02570 Precorrin-8X methylmutase CSC00_3296 PF01888 CbiD CSC00_3297 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSC00_3298 PF05175 Methyltransferase small domain CSC00_3299 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSC00_3300 PF11760 Cobalamin synthesis G N-terminal CSC00_3300 PF11761 Cobalamin biosynthesis central region CSC00_3300 PF01890 Cobalamin synthesis G C-terminus CSC00_3301 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSC00_3302 PF02571 Precorrin-6x reductase CbiJ/CobK CSC00_3303 PF06180 Cobalt chelatase (CbiK) CSC00_3304 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSC00_3305 PF01891 Cobalt uptake substrate-specific transmembrane region CSC00_3306 PF02553 Cobalt transport protein component CbiN CSC00_3307 PF02361 Cobalt transport protein CSC00_3308 PF00005 ABC transporter CSC00_3309 PF07685 CobB/CobQ-like glutamine amidotransferase domain CSC00_3310 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CSC00_3311 PF02277 Phosphoribosyltransferase CSC00_3315 PF06725 3D domain CSC00_3315 PF03562 MltA specific insert domain CSC00_3316 PF00899 ThiF family CSC00_3317 PF02657 Fe-S metabolism associated domain CSC00_3318 PF00266 Aminotransferase class-V CSC00_3319 PF06004 Bacterial protein of unknown function (DUF903) CSC00_3320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3320 PF03466 LysR substrate binding domain CSC00_3321 PF04241 Protein of unknown function (DUF423) CSC00_3322 PF18125 RlmM ferredoxin-like domain CSC00_3322 PF01728 FtsJ-like methyltransferase CSC00_3323 PF00455 DeoR C terminal sensor domain CSC00_3323 PF08220 DeoR-like helix-turn-helix domain CSC00_3324 PF05025 RbsD / FucU transport protein family CSC00_3325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_3325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_3326 PF07882 L-fucose isomerase, second N-terminal domain CSC00_3326 PF02952 L-fucose isomerase, C-terminal domain CSC00_3326 PF07881 L-fucose isomerase, first N-terminal domain CSC00_3327 PF07690 Major Facilitator Superfamily CSC00_3329 PF00596 Class II Aldolase and Adducin N-terminal domain CSC00_3330 PF00465 Iron-containing alcohol dehydrogenase CSC00_3331 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CSC00_3331 PF01367 5'-3' exonuclease, C-terminal SAM fold CSC00_3332 PF00158 Sigma-54 interaction domain CSC00_3334 PF00296 Luciferase-like monooxygenase CSC00_3336 PF00296 Luciferase-like monooxygenase CSC00_3337 PF00005 ABC transporter CSC00_3338 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3339 PF03180 NLPA lipoprotein CSC00_3340 PF07690 Major Facilitator Superfamily CSC00_3342 PF09084 NMT1/THI5 like CSC00_3343 PF03315 Serine dehydratase beta chain CSC00_3343 PF03313 Serine dehydratase alpha chain CSC00_3345 PF11892 Domain of unknown function (DUF3412) CSC00_3345 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CSC00_3345 PF03641 Possible lysine decarboxylase CSC00_3346 PF14489 QueF-like protein CSC00_3346 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CSC00_3347 PF07348 Syd protein (SUKH-2) CSC00_3348 PF04287 tRNA pseudouridine synthase C CSC00_3349 PF00849 RNA pseudouridylate synthase CSC00_3350 PF00258 Flavodoxin CSC00_3351 PF07690 Major Facilitator Superfamily CSC00_3352 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSC00_3352 PF13378 Enolase C-terminal domain-like CSC00_3353 PF13378 Enolase C-terminal domain-like CSC00_3354 PF02595 Glycerate kinase family CSC00_3355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_3355 PF00512 His Kinase A (phospho-acceptor) domain CSC00_3355 PF01627 Hpt domain CSC00_3355 PF00072 Response regulator receiver domain CSC00_3355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CSC00_3355 PF00672 HAMP domain CSC00_3356 PF05958 tRNA (Uracil-5-)-methyltransferase CSC00_3356 PF01938 TRAM domain CSC00_3357 PF04607 Region found in RelA / SpoT proteins CSC00_3357 PF13291 ACT domain CSC00_3357 PF02824 TGS domain CSC00_3358 PF03819 MazG nucleotide pyrophosphohydrolase domain CSC00_3359 PF00117 Glutamine amidotransferase class-I CSC00_3359 PF06418 CTP synthase N-terminus CSC00_3360 PF00113 Enolase, C-terminal TIM barrel domain CSC00_3360 PF03952 Enolase, N-terminal domain CSC00_3363 PF04055 Radical SAM superfamily CSC00_3364 PF01242 6-pyruvoyl tetrahydropterin synthase CSC00_3366 PF00175 Oxidoreductase NAD-binding domain CSC00_3366 PF00258 Flavodoxin CSC00_3366 PF00667 FAD binding domain CSC00_3367 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CSC00_3367 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CSC00_3368 PF01507 Phosphoadenosine phosphosulfate reductase family CSC00_3369 PF04389 Peptidase family M28 CSC00_3370 PF10414 Sirohaem synthase dimerisation region CSC00_3370 PF14824 Sirohaem biosynthesis protein central CSC00_3370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSC00_3371 PF01507 Phosphoadenosine phosphosulfate reductase family CSC00_3372 PF00009 Elongation factor Tu GTP binding domain CSC00_3374 PF12084 Protein of unknown function (DUF3561) CSC00_3375 PF04977 Septum formation initiator CSC00_3376 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CSC00_3377 PF02542 YgbB family CSC00_3378 PF01142 tRNA pseudouridine synthase D (TruD) CSC00_3379 PF01975 Survival protein SurE CSC00_3381 PF01551 Peptidase family M23 CSC00_3381 PF01476 LysM domain CSC00_3382 PF04542 Sigma-70 region 2 CSC00_3382 PF04539 Sigma-70 region 3 CSC00_3382 PF00140 Sigma-70 factor, region 1.2 CSC00_3382 PF04545 Sigma-70, region 4 CSC00_3384 PF07690 Major Facilitator Superfamily CSC00_3385 PF03466 LysR substrate binding domain CSC00_3385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3386 PF01047 MarR family CSC00_3387 PF02441 Flavoprotein CSC00_3388 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CSC00_3390 PF01848 Hok/gef family CSC00_3391 PF05190 MutS family domain IV CSC00_3391 PF05188 MutS domain II CSC00_3391 PF01624 MutS domain I CSC00_3391 PF00488 MutS domain V CSC00_3391 PF05192 MutS domain III CSC00_3394 PF00005 ABC transporter CSC00_3395 PF01032 FecCD transport family CSC00_3396 PF01497 Periplasmic binding protein CSC00_3397 PF05171 Haemin-degrading HemS.ChuX domain CSC00_3398 PF00593 TonB dependent receptor CSC00_3398 PF07715 TonB-dependent Receptor Plug Domain CSC00_3400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_3400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_3400 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_3401 PF03547 Membrane transport protein CSC00_3403 PF11756 Nitrous oxide-stimulated promoter CSC00_3404 PF00950 ABC 3 transport family CSC00_3405 PF00950 ABC 3 transport family CSC00_3406 PF00005 ABC transporter CSC00_3407 PF01297 Zinc-uptake complex component A periplasmic CSC00_3408 PF00356 Bacterial regulatory proteins, lacI family CSC00_3409 PF00480 ROK family CSC00_3410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSC00_3411 PF02378 Phosphotransferase system, EIIC CSC00_3412 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_3413 PF02378 Phosphotransferase system, EIIC CSC00_3414 PF02264 LamB porin CSC00_3416 PF00232 Glycosyl hydrolase family 1 CSC00_3417 PF01590 GAF domain CSC00_3417 PF00158 Sigma-54 interaction domain CSC00_3417 PF02954 Bacterial regulatory protein, Fis family CSC00_3418 PF02769 AIR synthase related protein, C-terminal domain CSC00_3418 PF00586 AIR synthase related protein, N-terminal domain CSC00_3419 PF01924 Hydrogenase formation hypA family CSC00_3420 PF01455 HupF/HypC family CSC00_3421 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSC00_3423 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CSC00_3424 PF11046 Transcriptional repressor of hyc and hyp operons CSC00_3425 PF13247 4Fe-4S dicluster domain CSC00_3426 PF00361 Proton-conducting membrane transporter CSC00_3427 PF00146 NADH dehydrogenase CSC00_3428 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CSC00_3428 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CSC00_3428 PF00374 Nickel-dependent hydrogenase CSC00_3429 PF12838 4Fe-4S dicluster domain CSC00_3430 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CSC00_3431 PF07450 Formate hydrogenlyase maturation protein HycH CSC00_3432 PF01750 Hydrogenase maturation protease CSC00_3433 PF08845 Toxin SymE, type I toxin-antitoxin system CSC00_3435 PF00232 Glycosyl hydrolase family 1 CSC00_3436 PF00367 phosphotransferase system, EIIB CSC00_3436 PF02378 Phosphotransferase system, EIIC CSC00_3439 PF00356 Bacterial regulatory proteins, lacI family CSC00_3440 PF12800 4Fe-4S binding domain CSC00_3440 PF13247 4Fe-4S dicluster domain CSC00_3441 PF00708 Acylphosphatase CSC00_3441 PF17788 HypF Kae1-like domain CSC00_3441 PF01300 Telomere recombination CSC00_3441 PF07503 HypF finger CSC00_3442 PF03824 High-affinity nickel-transport protein CSC00_3443 PF18113 Rubredoxin binding C-terminal domain CSC00_3443 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_3444 PF00301 Rubredoxin CSC00_3444 PF00753 Metallo-beta-lactamase superfamily CSC00_3444 PF00258 Flavodoxin CSC00_3446 PF01590 GAF domain CSC00_3446 PF00158 Sigma-54 interaction domain CSC00_3447 PF00571 CBS domain CSC00_3447 PF01380 SIS domain CSC00_3448 PF00455 DeoR C terminal sensor domain CSC00_3448 PF08220 DeoR-like helix-turn-helix domain CSC00_3449 PF06923 Glucitol operon activator protein (GutM) CSC00_3450 PF00106 short chain dehydrogenase CSC00_3451 PF03829 PTS system glucitol/sorbitol-specific IIA component CSC00_3452 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CSC00_3452 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CSC00_3453 PF03608 PTS system enzyme II sorbitol-specific factor CSC00_3454 PF13406 Transglycosylase SLT domain CSC00_3455 PF00005 ABC transporter CSC00_3456 PF00950 ABC 3 transport family CSC00_3457 PF01297 Zinc-uptake complex component A periplasmic CSC00_3458 PF02464 Competence-damaged protein CSC00_3459 PF00154 recA bacterial DNA recombination protein CSC00_3460 PF02631 RecX family CSC00_3462 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSC00_3462 PF01411 tRNA synthetases class II (A) CSC00_3462 PF02272 DHHA1 domain CSC00_3463 PF02599 Global regulator protein family CSC00_3470 PF04972 BON domain CSC00_3471 PF13419 Haloacid dehalogenase-like hydrolase CSC00_3472 PF09335 SNARE associated Golgi protein CSC00_3473 PF04262 Glutamate-cysteine ligase CSC00_3474 PF02664 S-Ribosylhomocysteinase (LuxS) CSC00_3475 PF12852 Cupin CSC00_3475 PF12833 Helix-turn-helix domain CSC00_3476 PF00682 HMGL-like CSC00_3476 PF08502 LeuA allosteric (dimerisation) domain CSC00_3477 PF07690 Major Facilitator Superfamily CSC00_3478 PF00529 HlyD membrane-fusion protein of T1SS CSC00_3478 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_3480 PF01047 MarR family CSC00_3481 PF05437 Branched-chain amino acid transport protein (AzlD) CSC00_3482 PF03591 AzlC protein CSC00_3483 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CSC00_3484 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3485 PF00571 CBS domain CSC00_3485 PF00005 ABC transporter CSC00_3486 PF00268 Ribonucleotide reductase, small chain CSC00_3487 PF02867 Ribonucleotide reductase, barrel domain CSC00_3487 PF00317 Ribonucleotide reductase, all-alpha domain CSC00_3487 PF08343 Ribonucleotide reductase N-terminal CSC00_3488 PF07972 NrdI Flavodoxin like CSC00_3489 PF00462 Glutaredoxin CSC00_3490 PF02627 Carboxymuconolactone decarboxylase family CSC00_3491 PF00155 Aminotransferase class I and II CSC00_3491 PF00392 Bacterial regulatory proteins, gntR family CSC00_3492 PF05957 Bacterial protein of unknown function (DUF883) CSC00_3493 PF09400 Protein of unknown function (DUF2002) CSC00_3494 PF06610 L-alanine exporter CSC00_3496 PF00816 H-NS histone family CSC00_3499 PF00581 Rhodanese-like domain CSC00_3499 PF11127 Protein of unknown function (DUF2892) CSC00_3500 PF01022 Bacterial regulatory protein, arsR family CSC00_3501 PF02525 Flavodoxin-like fold CSC00_3502 PF03466 LysR substrate binding domain CSC00_3502 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3503 PF01590 GAF domain CSC00_3503 PF00158 Sigma-54 interaction domain CSC00_3503 PF02954 Bacterial regulatory protein, Fis family CSC00_3504 PF00171 Aldehyde dehydrogenase family CSC00_3507 PF16970 Type-1 fimbrial protein, A CSC00_3508 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_3508 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_3509 PF00577 Outer membrane usher protein CSC00_3509 PF13954 PapC N-terminal domain CSC00_3509 PF13953 PapC C-terminal domain CSC00_3512 PF13953 PapC C-terminal domain CSC00_3512 PF13954 PapC N-terminal domain CSC00_3512 PF00577 Outer membrane usher protein CSC00_3513 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_3513 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_3514 PF00419 Fimbrial protein CSC00_3515 PF00072 Response regulator receiver domain CSC00_3515 PF00196 Bacterial regulatory proteins, luxR family CSC00_3518 PF00106 short chain dehydrogenase CSC00_3519 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_3520 PF00596 Class II Aldolase and Adducin N-terminal domain CSC00_3521 PF00005 ABC transporter CSC00_3522 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_3525 PF00491 Arginase family CSC00_3526 PF03466 LysR substrate binding domain CSC00_3526 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3529 PF00873 AcrB/AcrD/AcrF family CSC00_3530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_3530 PF00529 HlyD membrane-fusion protein of T1SS CSC00_3531 PF12833 Helix-turn-helix domain CSC00_3531 PF06445 GyrI-like small molecule binding domain CSC00_3534 PF03466 LysR substrate binding domain CSC00_3534 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3536 PF01668 SmpB protein CSC00_3537 PF03364 Polyketide cyclase / dehydrase and lipid transport CSC00_3538 PF03658 RnfH family Ubiquitin CSC00_3539 PF04355 SmpA / OmlA family CSC00_3541 PF02463 RecF/RecN/SMC N terminal domain CSC00_3542 PF01513 ATP-NAD kinase CSC00_3543 PF01025 GrpE CSC00_3544 PF01595 Cyclin M transmembrane N-terminal domain CSC00_3544 PF03471 Transporter associated domain CSC00_3544 PF00571 CBS domain CSC00_3545 PF01578 Cytochrome C assembly protein CSC00_3546 PF00448 SRP54-type protein, GTPase domain CSC00_3546 PF02978 Signal peptide binding domain CSC00_3546 PF02881 SRP54-type protein, helical bundle domain CSC00_3547 PF00886 Ribosomal protein S16 CSC00_3548 PF01782 RimM N-terminal domain CSC00_3548 PF05239 PRC-barrel domain CSC00_3549 PF01746 tRNA (Guanine-1)-methyltransferase CSC00_3550 PF01245 Ribosomal protein L19 CSC00_3554 PF00691 OmpA family CSC00_3555 PF17152 Periplasmic sensor domain CSC00_3555 PF00990 Diguanylate cyclase, GGDEF domain CSC00_3556 PF13689 YfiR/HmsC-like CSC00_3557 PF00793 DAHP synthetase I family CSC00_3558 PF02153 Prephenate dehydrogenase CSC00_3558 PF01817 Chorismate mutase type II CSC00_3559 PF08450 SMP-30/Gluconolactonase/LRE-like region CSC00_3560 PF01817 Chorismate mutase type II CSC00_3560 PF00800 Prephenate dehydratase CSC00_3561 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CSC00_3562 PF13525 Outer membrane lipoprotein CSC00_3563 PF01479 S4 domain CSC00_3563 PF00849 RNA pseudouridylate synthase CSC00_3566 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_3566 PF07724 AAA domain (Cdc48 subfamily) CSC00_3566 PF17871 AAA lid domain CSC00_3566 PF02861 Clp amino terminal domain, pathogenicity island component CSC00_3566 PF10431 C-terminal, D2-small domain, of ClpB protein CSC00_3573 PF00083 Sugar (and other) transporter CSC00_3574 PF10043 Predicted periplasmic lipoprotein (DUF2279) CSC00_3575 PF13091 PLD-like domain CSC00_3576 PF00583 Acetyltransferase (GNAT) family CSC00_3576 PF13607 Succinyl-CoA ligase like flavodoxin domain CSC00_3576 PF13380 CoA binding domain CSC00_3578 PF00085 Thioredoxin CSC00_3579 PF08032 RNA 2'-O ribose methyltransferase substrate binding CSC00_3579 PF00588 SpoU rRNA Methylase family CSC00_3580 PF03167 Uracil DNA glycosylase superfamily CSC00_3581 PF01228 Glycine radical CSC00_3582 PF00271 Helicase conserved C-terminal domain CSC00_3582 PF00270 DEAD/DEAH box helicase CSC00_3583 PF05175 Methyltransferase small domain CSC00_3584 PF02910 Fumarate reductase flavoprotein C-term CSC00_3584 PF00890 FAD binding domain CSC00_3585 PF08281 Sigma-70, region 4 CSC00_3585 PF04542 Sigma-70 region 2 CSC00_3586 PF03872 Anti sigma-E protein RseA, N-terminal domain CSC00_3586 PF03873 Anti sigma-E protein RseA, C-terminal domain CSC00_3587 PF17188 MucB/RseB C-terminal domain CSC00_3587 PF03888 MucB/RseB N-terminal domain CSC00_3589 PF03144 Elongation factor Tu domain 2 CSC00_3589 PF00009 Elongation factor Tu GTP binding domain CSC00_3589 PF00679 Elongation factor G C-terminus CSC00_3589 PF06421 GTP-binding protein LepA C-terminus CSC00_3590 PF10502 Signal peptidase, peptidase S26 CSC00_3591 PF14622 Ribonuclease-III-like CSC00_3591 PF00035 Double-stranded RNA binding motif CSC00_3592 PF01926 50S ribosome-binding GTPase CSC00_3592 PF07650 KH domain CSC00_3593 PF11967 Recombination protein O N terminal CSC00_3593 PF02565 Recombination protein O C terminal CSC00_3594 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CSC00_3595 PF01648 4'-phosphopantetheinyl transferase superfamily CSC00_3596 PF12838 4Fe-4S dicluster domain CSC00_3597 PF01380 SIS domain CSC00_3597 PF01418 Helix-turn-helix domain, rpiR family CSC00_3599 PF14437 MafB19-like deaminase CSC00_3600 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_3600 PF01464 Transglycosylase SLT domain CSC00_3601 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CSC00_3601 PF02769 AIR synthase related protein, C-terminal domain CSC00_3601 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CSC00_3602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_3602 PF00512 His Kinase A (phospho-acceptor) domain CSC00_3603 PF13942 YfhG lipoprotein CSC00_3604 PF00158 Sigma-54 interaction domain CSC00_3604 PF00072 Response regulator receiver domain CSC00_3605 PF00543 Nitrogen regulatory protein P-II CSC00_3606 PF00970 Oxidoreductase FAD-binding domain CSC00_3606 PF00042 Globin CSC00_3606 PF00175 Oxidoreductase NAD-binding domain CSC00_3607 PF00464 Serine hydroxymethyltransferase CSC00_3608 PF07681 DoxX CSC00_3609 PF00480 ROK family CSC00_3610 PF13181 Tetratricopeptide repeat CSC00_3610 PF17128 Domain of unknown function (DUF5107) CSC00_3611 PF00083 Sugar (and other) transporter CSC00_3612 PF01263 Aldose 1-epimerase CSC00_3613 PF12832 MFS_1 like family CSC00_3614 PF00874 PRD domain CSC00_3615 PF06226 Protein of unknown function (DUF1007) CSC00_3616 PF03824 High-affinity nickel-transport protein CSC00_3618 PF00459 Inositol monophosphatase family CSC00_3619 PF00588 SpoU rRNA Methylase family CSC00_3621 PF02082 Transcriptional regulator CSC00_3622 PF00266 Aminotransferase class-V CSC00_3623 PF01592 NifU-like N terminal domain CSC00_3624 PF01521 Iron-sulphur cluster biosynthesis CSC00_3625 PF00226 DnaJ domain CSC00_3625 PF07743 HSCB C-terminal oligomerisation domain CSC00_3626 PF00012 Hsp70 protein CSC00_3627 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_3628 PF04384 Iron-sulphur cluster assembly CSC00_3629 PF00883 Cytosol aminopeptidase family, catalytic domain CSC00_3629 PF12404 Peptidase CSC00_3630 PF14581 SseB protein C-terminal domain CSC00_3630 PF07179 SseB protein N-terminal domain CSC00_3632 PF00581 Rhodanese-like domain CSC00_3633 PF07678 A-macroglobulin TED domain CSC00_3633 PF17962 Bacterial macroglobulin domain 6 CSC00_3633 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CSC00_3633 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CSC00_3633 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CSC00_3633 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CSC00_3633 PF07703 Alpha-2-macroglobulin bait region domain CSC00_3633 PF00207 Alpha-2-macroglobulin family CSC00_3633 PF01835 MG2 domain CSC00_3634 PF00905 Penicillin binding protein transpeptidase domain CSC00_3634 PF00912 Transglycosylase CSC00_3634 PF06832 Penicillin-Binding Protein C-terminus Family CSC00_3635 PF00334 Nucleoside diphosphate kinase CSC00_3636 PF04055 Radical SAM superfamily CSC00_3638 PF13464 Domain of unknown function (DUF4115) CSC00_3639 PF04551 GcpE protein CSC00_3640 PF13393 Histidyl-tRNA synthetase CSC00_3640 PF03129 Anticodon binding domain CSC00_3641 PF09976 Tetratricopeptide repeat-like domain CSC00_3642 PF13360 PQQ-like domain CSC00_3643 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CSC00_3643 PF01926 50S ribosome-binding GTPase CSC00_3645 PF07191 zinc-ribbons CSC00_3646 PF13742 OB-fold nucleic acid binding domain CSC00_3646 PF02601 Exonuclease VII, large subunit CSC00_3648 PF00571 CBS domain CSC00_3648 PF00478 IMP dehydrogenase / GMP reductase domain CSC00_3649 PF00117 Glutamine amidotransferase class-I CSC00_3649 PF02540 NAD synthase CSC00_3649 PF00958 GMP synthase C terminal domain CSC00_3651 PF13186 Iron-sulfur cluster-binding domain CSC00_3651 PF04055 Radical SAM superfamily CSC00_3653 PF03466 LysR substrate binding domain CSC00_3653 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3654 PF11119 Protein of unknown function (DUF2633) CSC00_3655 PF05231 MASE1 CSC00_3655 PF00563 EAL domain CSC00_3656 PF02541 Ppx/GppA phosphatase family CSC00_3657 PF17941 Polyphosphate kinase C-terminal domain 1 CSC00_3657 PF13090 Polyphosphate kinase C-terminal domain 2 CSC00_3657 PF02503 Polyphosphate kinase middle domain CSC00_3657 PF13089 Polyphosphate kinase N-terminal domain CSC00_3658 PF00551 Formyl transferase CSC00_3659 PF00586 AIR synthase related protein, N-terminal domain CSC00_3659 PF02769 AIR synthase related protein, C-terminal domain CSC00_3660 PF00480 ROK family CSC00_3661 PF00232 Glycosyl hydrolase family 1 CSC00_3663 PF00860 Permease family CSC00_3664 PF00308 Bacterial dnaA protein CSC00_3665 PF04754 Putative transposase, YhgA-like CSC00_3666 PF03960 ArsC family CSC00_3667 PF01435 Peptidase family M48 CSC00_3669 PF01594 AI-2E family transporter CSC00_3670 PF00578 AhpC/TSA family CSC00_3671 PF01842 ACT domain CSC00_3672 PF00701 Dihydrodipicolinate synthetase family CSC00_3673 PF06804 NlpB/DapX lipoprotein CSC00_3674 PF01259 SAICAR synthetase CSC00_3675 PF04228 Putative neutral zinc metallopeptidase CSC00_3676 PF13718 GNAT acetyltransferase 2 CSC00_3676 PF17176 tRNA-binding domain CSC00_3676 PF08351 Domain of unknown function (DUF1726) CSC00_3676 PF05127 Helicase CSC00_3677 PF02230 Phospholipase/Carboxylesterase CSC00_3678 PF13980 Uncharacterised protein family (UPF0370) CSC00_3679 PF07687 Peptidase dimerisation domain CSC00_3679 PF01546 Peptidase family M20/M25/M40 CSC00_3680 PF03960 ArsC family CSC00_3681 PF00873 AcrB/AcrD/AcrF family CSC00_3682 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_3682 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CSC00_3682 PF13247 4Fe-4S dicluster domain CSC00_3683 PF00293 NUDIX domain CSC00_3684 PF06674 Protein of unknown function (DUF1176) CSC00_3685 PF00456 Transketolase, thiamine diphosphate binding domain CSC00_3685 PF02780 Transketolase, C-terminal domain CSC00_3685 PF02779 Transketolase, pyrimidine binding domain CSC00_3686 PF00923 Transaldolase/Fructose-6-phosphate aldolase CSC00_3687 PF03949 Malic enzyme, NAD binding domain CSC00_3687 PF00390 Malic enzyme, N-terminal domain CSC00_3687 PF01515 Phosphate acetyl/butaryl transferase CSC00_3688 PF00936 BMC domain CSC00_3689 PF10662 Ethanolamine utilisation - propanediol utilisation CSC00_3690 PF06249 Ethanolamine utilisation protein EutQ CSC00_3691 PF01923 Cobalamin adenosyltransferase CSC00_3692 PF01515 Phosphate acetyl/butaryl transferase CSC00_3693 PF00936 BMC domain CSC00_3694 PF03319 Ethanolamine utilisation protein EutN/carboxysome CSC00_3695 PF00171 Aldehyde dehydrogenase family CSC00_3697 PF00465 Iron-containing alcohol dehydrogenase CSC00_3698 PF04346 Ethanolamine utilisation protein, EutH CSC00_3699 PF06277 Ethanolamine utilisation protein EutA CSC00_3700 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CSC00_3701 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CSC00_3702 PF00936 BMC domain CSC00_3703 PF00936 BMC domain CSC00_3703 PF16365 Ethanolamine utilization protein EutK C-terminus CSC00_3704 PF12833 Helix-turn-helix domain CSC00_3705 PF01218 Coproporphyrinogen III oxidase CSC00_3706 PF01520 N-acetylmuramoyl-L-alanine amidase CSC00_3707 PF00583 Acetyltransferase (GNAT) family CSC00_3708 PF11143 Protein of unknown function (DUF2919) CSC00_3709 PF06572 Protein of unknown function (DUF1131) CSC00_3710 PF04261 Dyp-type peroxidase family CSC00_3712 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3713 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3714 PF00005 ABC transporter CSC00_3715 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_3716 PF13474 SnoaL-like domain CSC00_3717 PF00155 Aminotransferase class I and II CSC00_3717 PF00392 Bacterial regulatory proteins, gntR family CSC00_3718 PF08543 Phosphomethylpyrimidine kinase CSC00_3720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSC00_3721 PF02896 PEP-utilising enzyme, TIM barrel domain CSC00_3721 PF00391 PEP-utilising enzyme, mobile domain CSC00_3721 PF05524 PEP-utilising enzyme, N-terminal CSC00_3722 PF00381 PTS HPr component phosphorylation site CSC00_3723 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_3726 PF04354 ZipA, C-terminal FtsZ-binding domain CSC00_3727 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CSC00_3727 PF03120 NAD-dependent DNA ligase OB-fold domain CSC00_3727 PF12826 Helix-hairpin-helix motif CSC00_3727 PF01653 NAD-dependent DNA ligase adenylation domain CSC00_3727 PF00533 BRCA1 C Terminus (BRCT) domain CSC00_3728 PF12843 Putative quorum-sensing-regulated virulence factor CSC00_3729 PF13593 SBF-like CPA transporter family (DUF4137) CSC00_3730 PF03466 LysR substrate binding domain CSC00_3730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3736 PF00749 tRNA synthetases class I (E and Q), catalytic domain CSC00_3737 PF07037 Putative transcription regulator (DUF1323) CSC00_3738 PF07037 Putative transcription regulator (DUF1323) CSC00_3741 PF00563 EAL domain CSC00_3741 PF05231 MASE1 CSC00_3742 PF01773 Na+ dependent nucleoside transporter N-terminus CSC00_3742 PF07662 Na+ dependent nucleoside transporter C-terminus CSC00_3742 PF07670 Nucleoside recognition CSC00_3743 PF01566 Natural resistance-associated macrophage protein CSC00_3744 PF10697 Protein of unknown function (DUF2502) CSC00_3745 PF00248 Aldo/keto reductase family CSC00_3746 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_3746 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_3746 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_3747 PF00654 Voltage gated chloride channel CSC00_3748 PF02685 Glucokinase CSC00_3749 PF00072 Response regulator receiver domain CSC00_3749 PF04397 LytTr DNA-binding domain CSC00_3750 PF07694 5TMR of 5TMR-LYT CSC00_3750 PF06580 Histidine kinase CSC00_3750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_3752 PF00155 Aminotransferase class I and II CSC00_3753 PF07690 Major Facilitator Superfamily CSC00_3754 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSC00_3755 PF03466 LysR substrate binding domain CSC00_3755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3760 PF01226 Formate/nitrite transporter CSC00_3761 PF04333 MlaA lipoprotein CSC00_3762 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CSC00_3763 PF04175 Protein of unknown function (DUF406) CSC00_3764 PF02803 Thiolase, C-terminal domain CSC00_3764 PF00108 Thiolase, N-terminal domain CSC00_3765 PF00378 Enoyl-CoA hydratase/isomerase CSC00_3765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSC00_3765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSC00_3766 PF00300 Histidine phosphatase superfamily (branch 1) CSC00_3767 PF01713 Smr domain CSC00_3768 PF05175 Methyltransferase small domain CSC00_3769 PF01264 Chorismate synthase CSC00_3770 PF03411 Penicillin-insensitive murein endopeptidase CSC00_3771 PF01925 Sulfite exporter TauE/SafE CSC00_3772 PF04315 Elongation factor P hydroxylase CSC00_3773 PF08891 YfcL protein CSC00_3774 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CSC00_3774 PF01266 FAD dependent oxidoreductase CSC00_3775 PF02801 Beta-ketoacyl synthase, C-terminal domain CSC00_3775 PF00109 Beta-ketoacyl synthase, N-terminal domain CSC00_3776 PF07690 Major Facilitator Superfamily CSC00_3779 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSC00_3779 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_3779 PF11890 Domain of unknown function (DUF3410) CSC00_3780 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSC00_3780 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSC00_3781 PF01416 tRNA pseudouridine synthase CSC00_3782 PF09335 SNARE associated Golgi protein CSC00_3783 PF01039 Carboxyl transferase domain CSC00_3783 PF17848 Acetyl-coA carboxylase zinc finger domain CSC00_3784 PF02875 Mur ligase family, glutamate ligase domain CSC00_3784 PF08245 Mur ligase middle domain CSC00_3785 PF05036 Sporulation related domain CSC00_3786 PF02674 Colicin V production protein CSC00_3787 PF00156 Phosphoribosyl transferase domain CSC00_3788 PF02441 Flavoprotein CSC00_3790 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_3791 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_3792 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3793 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3794 PF00005 ABC transporter CSC00_3795 PF13302 Acetyltransferase (GNAT) domain CSC00_3797 PF01370 NAD dependent epimerase/dehydratase family CSC00_3797 PF08338 Domain of unknown function (DUF1731) CSC00_3798 PF02152 Dihydroneopterin aldolase CSC00_3799 PF00043 Glutathione S-transferase, C-terminal domain CSC00_3799 PF02798 Glutathione S-transferase, N-terminal domain CSC00_3800 PF14834 Glutathione S-transferase, C-terminal domain CSC00_3800 PF02798 Glutathione S-transferase, N-terminal domain CSC00_3801 PF12850 Calcineurin-like phosphoesterase superfamily domain CSC00_3802 PF00293 NUDIX domain CSC00_3803 PF07085 DRTGG domain CSC00_3803 PF01515 Phosphate acetyl/butaryl transferase CSC00_3804 PF00871 Acetokinase family CSC00_3807 PF04217 Protein of unknown function, DUF412 CSC00_3808 PF03887 YfbU domain CSC00_3809 PF13419 Haloacid dehalogenase-like hydrolase CSC00_3810 PF03600 Citrate transporter CSC00_3810 PF02080 TrkA-C domain CSC00_3812 PF00155 Aminotransferase class I and II CSC00_3814 PF03466 LysR substrate binding domain CSC00_3814 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3816 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CSC00_3817 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CSC00_3818 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CSC00_3818 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CSC00_3820 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CSC00_3820 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CSC00_3820 PF10531 SLBB domain CSC00_3821 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_3821 PF00384 Molybdopterin oxidoreductase CSC00_3821 PF01568 Molydopterin dinucleotide binding domain CSC00_3821 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CSC00_3822 PF00146 NADH dehydrogenase CSC00_3823 PF12838 4Fe-4S dicluster domain CSC00_3824 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CSC00_3825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CSC00_3826 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CSC00_3826 PF00361 Proton-conducting membrane transporter CSC00_3827 PF00361 Proton-conducting membrane transporter CSC00_3828 PF00361 Proton-conducting membrane transporter CSC00_3829 PF12706 Beta-lactamase superfamily domain CSC00_3830 PF13673 Acetyltransferase (GNAT) domain CSC00_3831 PF00425 chorismate binding enzyme CSC00_3832 PF16582 Middle domain of thiamine pyrophosphate CSC00_3832 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_3832 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_3833 PF12697 Alpha/beta hydrolase family CSC00_3834 PF00378 Enoyl-CoA hydratase/isomerase CSC00_3835 PF13378 Enolase C-terminal domain-like CSC00_3836 PF13193 AMP-binding enzyme C-terminal domain CSC00_3836 PF00501 AMP-binding enzyme CSC00_3837 PF00293 NUDIX domain CSC00_3839 PF04754 Putative transposase, YhgA-like CSC00_3841 PF07437 YfaZ precursor CSC00_3842 PF00994 Probable molybdopterin binding domain CSC00_3843 PF01614 Bacterial transcriptional regulator CSC00_3843 PF09339 IclR helix-turn-helix domain CSC00_3844 PF13378 Enolase C-terminal domain-like CSC00_3844 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSC00_3845 PF13378 Enolase C-terminal domain-like CSC00_3845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSC00_3846 PF07690 Major Facilitator Superfamily CSC00_3847 PF03328 HpcH/HpaI aldolase/citrate lyase family CSC00_3848 PF13183 4Fe-4S dicluster domain CSC00_3848 PF02754 Cysteine-rich domain CSC00_3849 PF00890 FAD binding domain CSC00_3850 PF04324 BFD-like [2Fe-2S] binding domain CSC00_3850 PF01266 FAD dependent oxidoreductase CSC00_3851 PF07690 Major Facilitator Superfamily CSC00_3852 PF03009 Glycerophosphoryl diester phosphodiesterase family CSC00_3853 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_3854 PF00268 Ribonucleotide reductase, small chain CSC00_3855 PF00317 Ribonucleotide reductase, all-alpha domain CSC00_3855 PF03477 ATP cone domain CSC00_3855 PF02867 Ribonucleotide reductase, barrel domain CSC00_3857 PF00521 DNA gyrase/topoisomerase IV, subunit A CSC00_3857 PF03989 DNA gyrase C-terminal domain, beta-propeller CSC00_3858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_3858 PF00512 His Kinase A (phospho-acceptor) domain CSC00_3858 PF09456 RcsC Alpha-Beta-Loop (ABL) CSC00_3858 PF00072 Response regulator receiver domain CSC00_3859 PF00196 Bacterial regulatory proteins, luxR family CSC00_3859 PF00072 Response regulator receiver domain CSC00_3860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_3860 PF01627 Hpt domain CSC00_3860 PF16359 RcsD-ABL domain CSC00_3862 PF00267 Gram-negative porin CSC00_3863 PF02424 ApbE family CSC00_3864 PF02805 Metal binding domain of Ada CSC00_3864 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CSC00_3864 PF12833 Helix-turn-helix domain CSC00_3864 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSC00_3865 PF13532 2OG-Fe(II) oxygenase superfamily CSC00_3866 PF00005 ABC transporter CSC00_3867 PF03448 MgtE intracellular N domain CSC00_3867 PF00571 CBS domain CSC00_3867 PF01769 Divalent cation transporter CSC00_3868 PF01740 STAS domain CSC00_3868 PF00916 Sulfate permease family CSC00_3869 PF06039 Malate:quinone oxidoreductase (Mqo) CSC00_3870 PF03974 Ecotin CSC00_3871 PF01594 AI-2E family transporter CSC00_3873 PF11893 Domain of unknown function (DUF3413) CSC00_3873 PF00884 Sulfatase CSC00_3874 PF07208 Protein of unknown function (DUF1414) CSC00_3875 PF04245 37-kD nucleoid-associated bacterial protein CSC00_3876 PF00455 DeoR C terminal sensor domain CSC00_3876 PF08220 DeoR-like helix-turn-helix domain CSC00_3877 PF00293 NUDIX domain CSC00_3878 PF00144 Beta-lactamase CSC00_3880 PF01386 Ribosomal L25p family CSC00_3881 PF04851 Type III restriction enzyme, res subunit CSC00_3881 PF00271 Helicase conserved C-terminal domain CSC00_3882 PF01479 S4 domain CSC00_3882 PF00849 RNA pseudouridylate synthase CSC00_3883 PF07690 Major Facilitator Superfamily CSC00_3884 PF13989 YejG-like protein CSC00_3885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_3885 PF00005 ABC transporter CSC00_3886 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3886 PF12911 N-terminal TM domain of oligopeptide transport permease C CSC00_3887 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3888 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_3889 PF00563 EAL domain CSC00_3889 PF12792 CSS motif domain associated with EAL CSC00_3890 PF00877 NlpC/P60 family CSC00_3893 PF01569 PAP2 superfamily CSC00_3894 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSC00_3894 PF07683 Cobalamin synthesis protein cobW C-terminal domain CSC00_3895 PF08125 Mannitol dehydrogenase C-terminal domain CSC00_3895 PF01232 Mannitol dehydrogenase Rossmann domain CSC00_3896 PF03786 D-mannonate dehydratase (UxuA) CSC00_3897 PF09285 Elongation factor P, C-terminal CSC00_3897 PF08207 Elongation factor P (EF-P) KOW-like domain CSC00_3897 PF01132 Elongation factor P (EF-P) OB domain CSC00_3898 PF03692 Putative zinc- or iron-chelating domain CSC00_3899 PF07690 Major Facilitator Superfamily CSC00_3900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_3900 PF00381 PTS HPr component phosphorylation site CSC00_3901 PF00294 pfkB family carbohydrate kinase CSC00_3902 PF02378 Phosphotransferase system, EIIC CSC00_3902 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_3903 PF01261 Xylose isomerase-like TIM barrel CSC00_3904 PF03601 Conserved hypothetical protein 698 CSC00_3906 PF03466 LysR substrate binding domain CSC00_3906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3907 PF00324 Amino acid permease CSC00_3909 PF07715 TonB-dependent Receptor Plug Domain CSC00_3909 PF00593 TonB dependent receptor CSC00_3910 PF00756 Putative esterase CSC00_3911 PF01227 GTP cyclohydrolase I CSC00_3912 PF04235 Protein of unknown function (DUF418) CSC00_3913 PF00356 Bacterial regulatory proteins, lacI family CSC00_3914 PF13407 Periplasmic binding protein domain CSC00_3915 PF00005 ABC transporter CSC00_3916 PF02653 Branched-chain amino acid transport system / permease component CSC00_3917 PF02698 DUF218 domain CSC00_3918 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSC00_3918 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CSC00_3919 PF04172 LrgB-like family CSC00_3920 PF03788 LrgA family CSC00_3921 PF01207 Dihydrouridine synthase (Dus) CSC00_3923 PF04966 Carbohydrate-selective porin, OprB family CSC00_3924 PF00874 PRD domain CSC00_3924 PF03123 CAT RNA binding domain CSC00_3925 PF00367 phosphotransferase system, EIIB CSC00_3925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSC00_3925 PF02378 Phosphotransferase system, EIIC CSC00_3926 PF00232 Glycosyl hydrolase family 1 CSC00_3928 PF02321 Outer membrane efflux protein CSC00_3929 PF09335 SNARE associated Golgi protein CSC00_3930 PF04893 Yip1 domain CSC00_3931 PF00768 D-alanyl-D-alanine carboxypeptidase CSC00_3933 PF01565 FAD binding domain CSC00_3933 PF09330 D-lactate dehydrogenase, membrane binding CSC00_3934 PF00933 Glycosyl hydrolase family 3 N terminal domain CSC00_3934 PF14310 Fibronectin type III-like domain CSC00_3934 PF01915 Glycosyl hydrolase family 3 C-terminal domain CSC00_3935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CSC00_3936 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3937 PF00005 ABC transporter CSC00_3938 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_3940 PF06580 Histidine kinase CSC00_3940 PF07694 5TMR of 5TMR-LYT CSC00_3941 PF04397 LytTr DNA-binding domain CSC00_3941 PF00072 Response regulator receiver domain CSC00_3942 PF07308 Protein of unknown function (DUF1456) CSC00_3943 PF09334 tRNA synthetases class I (M) CSC00_3943 PF01588 Putative tRNA binding domain CSC00_3945 PF10609 NUBPL iron-transfer P-loop NTPase CSC00_3947 PF11776 Nickel/cobalt transporter regulator CSC00_3948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3948 PF03466 LysR substrate binding domain CSC00_3949 PF00860 Permease family CSC00_3950 PF01979 Amidohydrolase family CSC00_3950 PF13382 Adenine deaminase C-terminal domain CSC00_3951 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_3951 PF03466 LysR substrate binding domain CSC00_3952 PF00753 Metallo-beta-lactamase superfamily CSC00_3952 PF14863 Alkyl sulfatase dimerisation CSC00_3952 PF14864 Alkyl sulfatase C-terminal CSC00_3954 PF00753 Metallo-beta-lactamase superfamily CSC00_3954 PF14864 Alkyl sulfatase C-terminal CSC00_3954 PF14863 Alkyl sulfatase dimerisation CSC00_3956 PF02110 Hydroxyethylthiazole kinase family CSC00_3957 PF08543 Phosphomethylpyrimidine kinase CSC00_3958 PF01791 DeoC/LacD family aldolase CSC00_3959 PF07690 Major Facilitator Superfamily CSC00_3961 PF00106 short chain dehydrogenase CSC00_3963 PF00356 Bacterial regulatory proteins, lacI family CSC00_3964 PF04198 Putative sugar-binding domain CSC00_3965 PF08125 Mannitol dehydrogenase C-terminal domain CSC00_3965 PF01232 Mannitol dehydrogenase Rossmann domain CSC00_3966 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_3966 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_3967 PF07690 Major Facilitator Superfamily CSC00_3968 PF13419 Haloacid dehalogenase-like hydrolase CSC00_3970 PF00665 Integrase core domain CSC00_3970 PF13276 HTH-like domain CSC00_3970 PF13333 Integrase core domain CSC00_3971 PF00781 Diacylglycerol kinase catalytic domain CSC00_3973 PF00486 Transcriptional regulatory protein, C terminal CSC00_3973 PF00072 Response regulator receiver domain CSC00_3974 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_3974 PF00672 HAMP domain CSC00_3974 PF00512 His Kinase A (phospho-acceptor) domain CSC00_3975 PF07690 Major Facilitator Superfamily CSC00_3976 PF00873 AcrB/AcrD/AcrF family CSC00_3977 PF00873 AcrB/AcrD/AcrF family CSC00_3978 PF13533 Biotin-lipoyl like CSC00_3979 PF00375 Sodium:dicarboxylate symporter family CSC00_3982 PF00072 Response regulator receiver domain CSC00_3982 PF00486 Transcriptional regulatory protein, C terminal CSC00_3983 PF00672 HAMP domain CSC00_3983 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_3983 PF00512 His Kinase A (phospho-acceptor) domain CSC00_3983 PF13426 PAS domain CSC00_3984 PF00012 Hsp70 protein CSC00_3985 PF06029 AlkA N-terminal domain CSC00_3985 PF00730 HhH-GPD superfamily base excision DNA repair protein CSC00_3986 PF00485 Phosphoribulokinase / Uridine kinase family CSC00_3987 PF00692 dUTPase CSC00_3988 PF05170 AsmA family CSC00_3989 PF00571 CBS domain CSC00_3989 PF03471 Transporter associated domain CSC00_3989 PF03741 Integral membrane protein TerC family CSC00_3990 PF00483 Nucleotidyl transferase CSC00_3991 PF01569 PAP2 superfamily CSC00_3994 PF14052 Capsule assembly protein Wzi CSC00_3995 PF02563 Polysaccharide biosynthesis/export protein CSC00_3995 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CSC00_3995 PF10531 SLBB domain CSC00_3997 PF01451 Low molecular weight phosphotyrosine protein phosphatase CSC00_3998 PF13807 G-rich domain on putative tyrosine kinase CSC00_3998 PF13614 AAA domain CSC00_3998 PF02706 Chain length determinant protein CSC00_3999 PF02397 Bacterial sugar transferase CSC00_4004 PF16363 GDP-mannose 4,6 dehydratase CSC00_4005 PF01370 NAD dependent epimerase/dehydratase family CSC00_4006 PF00293 NUDIX domain CSC00_4007 PF13579 Glycosyl transferase 4-like domain CSC00_4007 PF00534 Glycosyl transferases group 1 CSC00_4009 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSC00_4009 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CSC00_4010 PF01050 Mannose-6-phosphate isomerase CSC00_4010 PF00483 Nucleotidyl transferase CSC00_4011 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSC00_4011 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSC00_4011 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSC00_4011 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSC00_4012 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CSC00_4012 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CSC00_4012 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CSC00_4013 PF01370 NAD dependent epimerase/dehydratase family CSC00_4015 PF01370 NAD dependent epimerase/dehydratase family CSC00_4016 PF01061 ABC-2 type transporter CSC00_4017 PF00005 ABC transporter CSC00_4019 PF03275 UDP-galactopyranose mutase CSC00_4021 PF00534 Glycosyl transferases group 1 CSC00_4021 PF13439 Glycosyltransferase Family 4 CSC00_4022 PF01501 Glycosyl transferase family 8 CSC00_4022 PF00535 Glycosyl transferase family 2 CSC00_4024 PF00535 Glycosyl transferase family 2 CSC00_4026 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CSC00_4026 PF01502 Phosphoribosyl-AMP cyclohydrolase CSC00_4027 PF00977 Histidine biosynthesis protein CSC00_4028 PF00977 Histidine biosynthesis protein CSC00_4029 PF00117 Glutamine amidotransferase class-I CSC00_4030 PF08645 Polynucleotide kinase 3 phosphatase CSC00_4030 PF00475 Imidazoleglycerol-phosphate dehydratase CSC00_4031 PF00155 Aminotransferase class I and II CSC00_4032 PF00815 Histidinol dehydrogenase CSC00_4033 PF01634 ATP phosphoribosyltransferase CSC00_4033 PF08029 HisG, C-terminal domain CSC00_4034 PF01370 NAD dependent epimerase/dehydratase family CSC00_4035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4035 PF03466 LysR substrate binding domain CSC00_4036 PF13520 Amino acid permease CSC00_4037 PF01022 Bacterial regulatory protein, arsR family CSC00_4038 PF00009 Elongation factor Tu GTP binding domain CSC00_4038 PF03144 Elongation factor Tu domain 2 CSC00_4038 PF03764 Elongation factor G, domain IV CSC00_4038 PF14492 Elongation Factor G, domain II CSC00_4038 PF00679 Elongation factor G C-terminus CSC00_4039 PF08411 Exonuclease C-terminal CSC00_4039 PF00929 Exonuclease CSC00_4040 PF07943 Penicillin-binding protein 5, C-terminal domain CSC00_4040 PF00768 D-alanyl-D-alanine carboxypeptidase CSC00_4041 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSC00_4042 PF06445 GyrI-like small molecule binding domain CSC00_4043 PF04632 Fusaric acid resistance protein family CSC00_4044 PF04363 Protein of unknown function (DUF496) CSC00_4045 PF02654 Cobalamin-5-phosphate synthase CSC00_4046 PF02277 Phosphoribosyltransferase CSC00_4047 PF05221 S-adenosyl-L-homocysteine hydrolase CSC00_4047 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CSC00_4049 PF14552 Tautomerase enzyme CSC00_4050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4050 PF03466 LysR substrate binding domain CSC00_4052 PF00083 Sugar (and other) transporter CSC00_4052 PF07690 Major Facilitator Superfamily CSC00_4054 PF13188 PAS domain CSC00_4054 PF00990 Diguanylate cyclase, GGDEF domain CSC00_4054 PF03707 Bacterial signalling protein N terminal repeat CSC00_4054 PF00563 EAL domain CSC00_4056 PF09313 Domain of unknown function (DUF1971) CSC00_4057 PF08956 Domain of unknown function (DUF1869) CSC00_4058 PF03466 LysR substrate binding domain CSC00_4058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4060 PF00561 alpha/beta hydrolase fold CSC00_4061 PF00990 Diguanylate cyclase, GGDEF domain CSC00_4070 PF00816 H-NS histone family CSC00_4090 PF04851 Type III restriction enzyme, res subunit CSC00_4090 PF08774 VRR-NUC domain CSC00_4091 PF18273 Type III R-M EcoP15I C-terminal domain CSC00_4091 PF01555 DNA methylase CSC00_4093 PF00589 Phage integrase family CSC00_4093 PF13356 Arm DNA-binding domain CSC00_4096 PF01554 MatE CSC00_4098 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CSC00_4098 PF01048 Phosphorylase superfamily CSC00_4100 PF12146 Serine aminopeptidase, S33 CSC00_4102 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_4102 PF00107 Zinc-binding dehydrogenase CSC00_4103 PF16925 Tetracyclin repressor-like, C-terminal domain CSC00_4103 PF00440 Bacterial regulatory proteins, tetR family CSC00_4104 PF00999 Sodium/hydrogen exchanger family CSC00_4106 PF03466 LysR substrate binding domain CSC00_4106 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4107 PF03466 LysR substrate binding domain CSC00_4107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4108 PF03734 L,D-transpeptidase catalytic domain CSC00_4108 PF17969 L,D-transpeptidase C-terminal domain CSC00_4110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4110 PF03466 LysR substrate binding domain CSC00_4111 PF01042 Endoribonuclease L-PSP CSC00_4113 PF06167 Glucose-regulated metallo-peptidase M90 CSC00_4115 PF00267 Gram-negative porin CSC00_4117 PF01966 HD domain CSC00_4118 PF18284 DNA methylase N-terminal domain CSC00_4118 PF00145 C-5 cytosine-specific DNA methylase CSC00_4119 PF03852 DNA mismatch endonuclease Vsr CSC00_4120 PF00892 EamA-like transporter family CSC00_4121 PF05661 Protein of unknown function (DUF808) CSC00_4122 PF00990 Diguanylate cyclase, GGDEF domain CSC00_4122 PF17151 Periplasmic sensor domain CSC00_4123 PF10733 Protein of unknown function (DUF2525) CSC00_4124 PF10781 Dextransucrase DSRB CSC00_4125 PF00196 Bacterial regulatory proteins, luxR family CSC00_4126 PF13987 YedD-like protein CSC00_4127 PF00128 Alpha amylase, catalytic domain CSC00_4127 PF02806 Alpha amylase, C-terminal all-beta domain CSC00_4129 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_4132 PF03472 Autoinducer binding domain CSC00_4132 PF00196 Bacterial regulatory proteins, luxR family CSC00_4133 PF10769 Protein of unknown function (DUF2594) CSC00_4134 PF00196 Bacterial regulatory proteins, luxR family CSC00_4134 PF00072 Response regulator receiver domain CSC00_4135 PF02151 UvrB/uvrC motif CSC00_4135 PF01541 GIY-YIG catalytic domain CSC00_4135 PF08459 UvrC Helix-hairpin-helix N-terminal CSC00_4136 PF01066 CDP-alcohol phosphatidyltransferase CSC00_4140 PF00701 Dihydrodipicolinate synthetase family CSC00_4141 PF03695 Uncharacterised protein family (UPF0149) CSC00_4141 PF02810 SEC-C motif CSC00_4142 PF03222 Tryptophan/tyrosine permease family CSC00_4143 PF10678 Protein of unknown function (DUF2492) CSC00_4144 PF00210 Ferritin-like domain CSC00_4147 PF07690 Major Facilitator Superfamily CSC00_4148 PF10964 Protein of unknown function (DUF2766) CSC00_4151 PF00210 Ferritin-like domain CSC00_4153 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSC00_4154 PF00005 ABC transporter CSC00_4155 PF02653 Branched-chain amino acid transport system / permease component CSC00_4156 PF02358 Trehalose-phosphatase CSC00_4157 PF00982 Glycosyltransferase family 20 CSC00_4158 PF00582 Universal stress protein family CSC00_4160 PF07470 Glycosyl Hydrolase Family 88 CSC00_4161 PF05746 DALR anticodon binding domain CSC00_4161 PF03485 Arginyl tRNA synthetase N terminal domain CSC00_4161 PF00750 tRNA synthetases class I (R) CSC00_4162 PF06185 YecM protein CSC00_4163 PF03932 CutC family CSC00_4164 PF08003 Protein of unknown function (DUF1698) CSC00_4165 PF13649 Methyltransferase domain CSC00_4166 PF01124 MAPEG family CSC00_4167 PF01904 Protein of unknown function DUF72 CSC00_4168 PF00857 Isochorismatase family CSC00_4169 PF01336 OB-fold nucleic acid binding domain CSC00_4169 PF00152 tRNA synthetases class II (D, K and N) CSC00_4169 PF02938 GAD domain CSC00_4170 PF00293 NUDIX domain CSC00_4171 PF01709 Transcriptional regulator CSC00_4172 PF02075 Crossover junction endodeoxyribonuclease RuvC CSC00_4173 PF01330 RuvA N terminal domain CSC00_4173 PF07499 RuvA, C-terminal domain CSC00_4174 PF05496 Holliday junction DNA helicase RuvB P-loop domain CSC00_4174 PF17864 RuvB AAA lid domain CSC00_4174 PF05491 RuvB C-terminal winged helix domain CSC00_4175 PF00950 ABC 3 transport family CSC00_4176 PF00005 ABC transporter CSC00_4177 PF01297 Zinc-uptake complex component A periplasmic CSC00_4178 PF01476 LysM domain CSC00_4178 PF01551 Peptidase family M23 CSC00_4178 PF08525 Opacity-associated protein A N-terminal motif CSC00_4179 PF03279 Bacterial lipid A biosynthesis acyltransferase CSC00_4180 PF02887 Pyruvate kinase, alpha/beta domain CSC00_4180 PF00224 Pyruvate kinase, barrel domain CSC00_4181 PF01380 SIS domain CSC00_4181 PF01418 Helix-turn-helix domain, rpiR family CSC00_4184 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CSC00_4184 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CSC00_4185 PF00920 Dehydratase family CSC00_4186 PF01081 KDPG and KHG aldolase CSC00_4187 PF02222 ATP-grasp domain CSC00_4188 PF07130 YebG protein CSC00_4189 PF04391 Protein of unknown function (DUF533) CSC00_4190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CSC00_4190 PF00326 Prolyl oligopeptidase family CSC00_4191 PF00929 Exonuclease CSC00_4192 PF06440 DNA polymerase III, theta subunit CSC00_4193 PF04234 CopC domain CSC00_4194 PF05425 Copper resistance protein D CSC00_4195 PF10709 Protein of unknown function (DUF2511) CSC00_4197 PF04393 Protein of unknown function (DUF535) CSC00_4198 PF00149 Calcineurin-like phosphoesterase CSC00_4199 PF07358 Protein of unknown function (DUF1482) CSC00_4200 PF07351 Protein of unknown function (DUF1480) CSC00_4201 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CSC00_4201 PF01189 16S rRNA methyltransferase RsmB/F CSC00_4201 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CSC00_4202 PF02470 MlaD protein CSC00_4203 PF04403 Paraquat-inducible protein A CSC00_4204 PF13185 GAF domain CSC00_4205 PF17516 ProQ C-terminal domain CSC00_4205 PF04352 ProQ/FINO family CSC00_4206 PF03572 Peptidase family S41 CSC00_4206 PF11818 C-terminal domain of tail specific protease (DUF3340) CSC00_4206 PF00595 PDZ domain CSC00_4206 PF17804 Tail specific protease N-terminal domain CSC00_4207 PF01435 Peptidase family M48 CSC00_4208 PF07690 Major Facilitator Superfamily CSC00_4209 PF09339 IclR helix-turn-helix domain CSC00_4209 PF01614 Bacterial transcriptional regulator CSC00_4210 PF13996 YobH-like protein CSC00_4211 PF13998 MgrB protein CSC00_4212 PF13974 YebO-like protein CSC00_4214 PF00313 'Cold-shock' DNA-binding domain CSC00_4215 PF03717 Penicillin-binding Protein dimerisation domain CSC00_4215 PF00905 Penicillin binding protein transpeptidase domain CSC00_4216 PF13847 Methyltransferase domain CSC00_4217 PF02659 Putative manganese efflux pump CSC00_4218 PF06173 Protein of unknown function (DUF986) CSC00_4219 PF03613 PTS system mannose/fructose/sorbose family IID component CSC00_4220 PF03609 PTS system sorbose-specific iic component CSC00_4221 PF03610 PTS system fructose IIA component CSC00_4221 PF03830 PTS system sorbose subfamily IIB component CSC00_4222 PF03741 Integral membrane protein TerC family CSC00_4222 PF03471 Transporter associated domain CSC00_4223 PF12792 CSS motif domain associated with EAL CSC00_4223 PF00563 EAL domain CSC00_4224 PF03315 Serine dehydratase beta chain CSC00_4224 PF03313 Serine dehydratase alpha chain CSC00_4225 PF00293 NUDIX domain CSC00_4226 PF00425 chorismate binding enzyme CSC00_4226 PF04715 Anthranilate synthase component I, N terminal region CSC00_4227 PF03701 Uncharacterised protein family (UPF0181) CSC00_4228 PF01042 Endoribonuclease L-PSP CSC00_4229 PF13307 Helicase C-terminal domain CSC00_4229 PF04851 Type III restriction enzyme, res subunit CSC00_4230 PF00814 Glycoprotease family CSC00_4231 PF03843 Outer membrane lipoprotein Slp family CSC00_4232 PF13193 AMP-binding enzyme C-terminal domain CSC00_4232 PF00501 AMP-binding enzyme CSC00_4233 PF01612 3'-5' exonuclease CSC00_4233 PF00570 HRDC domain CSC00_4234 PF03776 Septum formation topological specificity factor MinE CSC00_4235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CSC00_4236 PF03775 Septum formation inhibitor MinC, C-terminal domain CSC00_4236 PF05209 Septum formation inhibitor MinC, N-terminal domain CSC00_4237 PF05166 YcgL domain CSC00_4238 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSC00_4239 PF03692 Putative zinc- or iron-chelating domain CSC00_4241 PF02600 Disulfide bond formation protein DsbB CSC00_4242 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CSC00_4244 PF07840 FadR C-terminal domain CSC00_4244 PF00392 Bacterial regulatory proteins, gntR family CSC00_4245 PF04293 SpoVR like protein CSC00_4247 PF01266 FAD dependent oxidoreductase CSC00_4248 PF01168 Alanine racemase, N-terminal domain CSC00_4248 PF00842 Alanine racemase, C-terminal domain CSC00_4249 PF03471 Transporter associated domain CSC00_4249 PF00999 Sodium/hydrogen exchanger family CSC00_4249 PF02080 TrkA-C domain CSC00_4250 PF02016 LD-carboxypeptidase N-terminal domain CSC00_4250 PF17676 LD-carboxypeptidase C-terminal domain CSC00_4251 PF01464 Transglycosylase SLT domain CSC00_4252 PF00593 TonB dependent receptor CSC00_4252 PF07715 TonB-dependent Receptor Plug Domain CSC00_4253 PF01204 Trehalase CSC00_4254 PF14403 Circularly permuted ATP-grasp type 2 CSC00_4263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4263 PF03466 LysR substrate binding domain CSC00_4264 PF00291 Pyridoxal-phosphate dependent enzyme CSC00_4265 PF03222 Tryptophan/tyrosine permease family CSC00_4266 PF00871 Acetokinase family CSC00_4267 PF01228 Glycine radical CSC00_4267 PF02901 Pyruvate formate lyase-like CSC00_4268 PF13458 Periplasmic binding protein CSC00_4269 PF02653 Branched-chain amino acid transport system / permease component CSC00_4270 PF02653 Branched-chain amino acid transport system / permease component CSC00_4270 PF11862 Domain of unknown function (DUF3382) CSC00_4271 PF00005 ABC transporter CSC00_4271 PF12399 Branched-chain amino acid ATP-binding cassette transporter CSC00_4272 PF00005 ABC transporter CSC00_4273 PF03466 LysR substrate binding domain CSC00_4273 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4274 PF01293 Phosphoenolpyruvate carboxykinase CSC00_4276 PF03466 LysR substrate binding domain CSC00_4276 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4277 PF07690 Major Facilitator Superfamily CSC00_4279 PF03466 LysR substrate binding domain CSC00_4279 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4281 PF00849 RNA pseudouridylate synthase CSC00_4282 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CSC00_4287 PF00691 OmpA family CSC00_4287 PF13488 Glycine zipper CSC00_4289 PF04717 Type VI secretion system, phage-baseplate injector CSC00_4297 PF13737 Transposase DDE domain CSC00_4303 PF03781 Sulfatase-modifying factor enzyme 1 CSC00_4309 PF01609 Transposase DDE domain CSC00_4309 PF05598 Transposase domain (DUF772) CSC00_4321 PF13407 Periplasmic binding protein domain CSC00_4323 PF06071 Protein of unknown function (DUF933) CSC00_4323 PF01926 50S ribosome-binding GTPase CSC00_4324 PF01195 Peptidyl-tRNA hydrolase CSC00_4326 PF10762 Protein of unknown function (DUF2583) CSC00_4328 PF01740 STAS domain CSC00_4328 PF00916 Sulfate permease family CSC00_4329 PF14572 Phosphoribosyl synthetase-associated domain CSC00_4329 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CSC00_4330 PF08544 GHMP kinases C terminal CSC00_4330 PF00288 GHMP kinases N terminal domain CSC00_4331 PF03550 Outer membrane lipoprotein LolB CSC00_4332 PF01488 Shikimate / quinate 5-dehydrogenase CSC00_4332 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CSC00_4332 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CSC00_4333 PF00472 RF-1 domain CSC00_4333 PF03462 PCRF domain CSC00_4334 PF13847 Methyltransferase domain CSC00_4334 PF17827 PrmC N-terminal domain CSC00_4335 PF04247 Invasion gene expression up-regulator, SirB CSC00_4336 PF13369 Transglutaminase-like superfamily CSC00_4337 PF00793 DAHP synthetase I family CSC00_4338 PF01699 Sodium/calcium exchanger protein CSC00_4339 PF06150 ChaB CSC00_4340 PF04752 ChaC-like protein CSC00_4343 PF02635 DsrE/DsrF-like family CSC00_4344 PF08376 Nitrate and nitrite sensing CSC00_4344 PF03861 ANTAR domain CSC00_4346 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4347 PF00005 ABC transporter CSC00_4348 PF13806 Rieske-like [2Fe-2S] domain CSC00_4348 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_4348 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CSC00_4348 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CSC00_4348 PF04324 BFD-like [2Fe-2S] binding domain CSC00_4348 PF18267 Rubredoxin NAD+ reductase C-terminal domain CSC00_4349 PF00384 Molybdopterin oxidoreductase CSC00_4349 PF01568 Molydopterin dinucleotide binding domain CSC00_4349 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_4349 PF04324 BFD-like [2Fe-2S] binding domain CSC00_4350 PF11924 Inverse autotransporter, beta-domain CSC00_4351 PF00196 Bacterial regulatory proteins, luxR family CSC00_4351 PF00072 Response regulator receiver domain CSC00_4352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_4352 PF07730 Histidine kinase CSC00_4352 PF00672 HAMP domain CSC00_4352 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CSC00_4353 PF07690 Major Facilitator Superfamily CSC00_4355 PF14710 Respiratory nitrate reductase alpha N-terminal CSC00_4355 PF01568 Molydopterin dinucleotide binding domain CSC00_4355 PF00384 Molybdopterin oxidoreductase CSC00_4356 PF13247 4Fe-4S dicluster domain CSC00_4356 PF14711 Respiratory nitrate reductase beta C-terminal CSC00_4357 PF02613 Nitrate reductase delta subunit CSC00_4358 PF02665 Nitrate reductase gamma subunit CSC00_4360 PF01037 Lrp/AsnC ligand binding domain CSC00_4363 PF00551 Formyl transferase CSC00_4363 PF01842 ACT domain CSC00_4364 PF02810 SEC-C motif CSC00_4365 PF01734 Patatin-like phospholipase CSC00_4366 PF00072 Response regulator receiver domain CSC00_4367 PF00483 Nucleotidyl transferase CSC00_4368 PF00816 H-NS histone family CSC00_4370 PF00265 Thymidine kinase CSC00_4371 PF00171 Aldehyde dehydrogenase family CSC00_4371 PF00465 Iron-containing alcohol dehydrogenase CSC00_4373 PF01914 MarC family integral membrane protein CSC00_4375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_4376 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4377 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4377 PF12911 N-terminal TM domain of oligopeptide transport permease C CSC00_4378 PF00005 ABC transporter CSC00_4378 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_4379 PF00005 ABC transporter CSC00_4379 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_4380 PF00520 Ion transport protein CSC00_4380 PF00027 Cyclic nucleotide-binding domain CSC00_4381 PF04269 Protein of unknown function, DUF440 CSC00_4382 PF13091 PLD-like domain CSC00_4382 PF13396 Phospholipase_D-nuclease N-terminal CSC00_4385 PF04264 YceI-like domain CSC00_4386 PF03795 YCII-related domain CSC00_4387 PF03544 Gram-negative bacterial TonB protein C-terminal CSC00_4389 PF11080 Endoribonuclease GhoS CSC00_4390 PF00294 pfkB family carbohydrate kinase CSC00_4391 PF04338 Protein of unknown function, DUF481 CSC00_4393 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSC00_4393 PF03129 Anticodon binding domain CSC00_4393 PF02824 TGS domain CSC00_4393 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSC00_4394 PF05198 Translation initiation factor IF-3, N-terminal domain CSC00_4394 PF00707 Translation initiation factor IF-3, C-terminal domain CSC00_4395 PF01632 Ribosomal protein L35 CSC00_4396 PF00453 Ribosomal protein L20 CSC00_4397 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CSC00_4397 PF01409 tRNA synthetases class II core domain (F) CSC00_4398 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CSC00_4398 PF01588 Putative tRNA binding domain CSC00_4398 PF03147 Ferredoxin-fold anticodon binding domain CSC00_4398 PF03484 tRNA synthetase B5 domain CSC00_4398 PF03483 B3/4 domain CSC00_4399 PF00216 Bacterial DNA-binding protein CSC00_4401 PF01266 FAD dependent oxidoreductase CSC00_4402 PF03466 LysR substrate binding domain CSC00_4402 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4404 PF01032 FecCD transport family CSC00_4405 PF03180 NLPA lipoprotein CSC00_4406 PF00255 Glutathione peroxidase CSC00_4407 PF00005 ABC transporter CSC00_4408 PF00877 NlpC/P60 family CSC00_4409 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CSC00_4410 PF10636 Hemin uptake protein hemP CSC00_4411 PF00793 DAHP synthetase I family CSC00_4412 PF03618 Kinase/pyrophosphorylase CSC00_4414 PF00391 PEP-utilising enzyme, mobile domain CSC00_4414 PF02896 PEP-utilising enzyme, TIM barrel domain CSC00_4414 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CSC00_4415 PF01594 AI-2E family transporter CSC00_4417 PF13183 4Fe-4S dicluster domain CSC00_4417 PF01565 FAD binding domain CSC00_4417 PF02913 FAD linked oxidases, C-terminal domain CSC00_4418 PF03061 Thioesterase superfamily CSC00_4419 PF04226 Transglycosylase associated protein CSC00_4423 PF01717 Cobalamin-independent synthase, Catalytic domain CSC00_4423 PF08267 Cobalamin-independent synthase, N-terminal domain CSC00_4424 PF07690 Major Facilitator Superfamily CSC00_4425 PF00005 ABC transporter CSC00_4426 PF01032 FecCD transport family CSC00_4428 PF03466 LysR substrate binding domain CSC00_4428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4432 PF00873 AcrB/AcrD/AcrF family CSC00_4433 PF01070 FMN-dependent dehydrogenase CSC00_4434 PF00440 Bacterial regulatory proteins, tetR family CSC00_4438 PF01521 Iron-sulphur cluster biosynthesis CSC00_4439 PF01458 Uncharacterized protein family (UPF0051) CSC00_4440 PF00005 ABC transporter CSC00_4441 PF01458 Uncharacterized protein family (UPF0051) CSC00_4442 PF00266 Aminotransferase class-V CSC00_4443 PF00266 Aminotransferase class-V CSC00_4444 PF02657 Fe-S metabolism associated domain CSC00_4445 PF01476 LysM domain CSC00_4445 PF17969 L,D-transpeptidase C-terminal domain CSC00_4445 PF03734 L,D-transpeptidase catalytic domain CSC00_4446 PF04728 Lipoprotein leucine-zipper CSC00_4447 PF00224 Pyruvate kinase, barrel domain CSC00_4447 PF02887 Pyruvate kinase, alpha/beta domain CSC00_4450 PF10965 Protein of unknown function (DUF2767) CSC00_4451 PF00440 Bacterial regulatory proteins, tetR family CSC00_4451 PF17926 Tetracyclin repressor-like, C-terminal domain CSC00_4453 PF07690 Major Facilitator Superfamily CSC00_4454 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CSC00_4454 PF01488 Shikimate / quinate 5-dehydrogenase CSC00_4454 PF08501 Shikimate dehydrogenase substrate binding domain CSC00_4459 PF01614 Bacterial transcriptional regulator CSC00_4459 PF09339 IclR helix-turn-helix domain CSC00_4460 PF01494 FAD binding domain CSC00_4461 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CSC00_4462 PF12697 Alpha/beta hydrolase family CSC00_4463 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSC00_4464 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSC00_4464 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CSC00_4465 PF00682 HMGL-like CSC00_4465 PF07836 DmpG-like communication domain CSC00_4466 PF07690 Major Facilitator Superfamily CSC00_4469 PF05995 Cysteine dioxygenase type I CSC00_4470 PF03466 LysR substrate binding domain CSC00_4470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4471 PF00296 Luciferase-like monooxygenase CSC00_4475 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4476 PF00005 ABC transporter CSC00_4477 PF07715 TonB-dependent Receptor Plug Domain CSC00_4478 PF00005 ABC transporter CSC00_4479 PF01032 FecCD transport family CSC00_4480 PF01032 FecCD transport family CSC00_4484 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSC00_4485 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4486 PF00005 ABC transporter CSC00_4489 PF07690 Major Facilitator Superfamily CSC00_4492 PF01546 Peptidase family M20/M25/M40 CSC00_4492 PF07687 Peptidase dimerisation domain CSC00_4493 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_4493 PF01568 Molydopterin dinucleotide binding domain CSC00_4493 PF00384 Molybdopterin oxidoreductase CSC00_4494 PF02615 Malate/L-lactate dehydrogenase CSC00_4497 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4498 PF00005 ABC transporter CSC00_4498 PF08402 TOBE domain CSC00_4502 PF13618 Gluconate 2-dehydrogenase subunit 3 CSC00_4503 PF05199 GMC oxidoreductase CSC00_4503 PF00732 GMC oxidoreductase CSC00_4504 PF00034 Cytochrome c CSC00_4504 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CSC00_4505 PF00005 ABC transporter CSC00_4506 PF03379 CcmB protein CSC00_4507 PF01578 Cytochrome C assembly protein CSC00_4509 PF03100 CcmE CSC00_4510 PF01578 Cytochrome C assembly protein CSC00_4510 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CSC00_4511 PF08534 Redoxin CSC00_4512 PF03918 Cytochrome C biogenesis protein CSC00_4514 PF12833 Helix-turn-helix domain CSC00_4514 PF12852 Cupin CSC00_4515 PF00248 Aldo/keto reductase family CSC00_4519 PF00106 short chain dehydrogenase CSC00_4520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSC00_4520 PF00205 Thiamine pyrophosphate enzyme, central domain CSC00_4520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_4521 PF03306 Alpha-acetolactate decarboxylase CSC00_4522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4522 PF03466 LysR substrate binding domain CSC00_4523 PF00106 short chain dehydrogenase CSC00_4525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSC00_4525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSC00_4526 PF00108 Thiolase, N-terminal domain CSC00_4526 PF02803 Thiolase, C-terminal domain CSC00_4527 PF01144 Coenzyme A transferase CSC00_4528 PF01144 Coenzyme A transferase CSC00_4529 PF03466 LysR substrate binding domain CSC00_4529 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4534 PF01565 FAD binding domain CSC00_4534 PF02913 FAD linked oxidases, C-terminal domain CSC00_4535 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4536 PF00005 ABC transporter CSC00_4538 PF02633 Creatinine amidohydrolase CSC00_4539 PF01042 Endoribonuclease L-PSP CSC00_4540 PF07969 Amidohydrolase family CSC00_4541 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_4542 PF03466 LysR substrate binding domain CSC00_4542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4544 PF01979 Amidohydrolase family CSC00_4546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4546 PF03466 LysR substrate binding domain CSC00_4547 PF07690 Major Facilitator Superfamily CSC00_4551 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_4551 PF00005 ABC transporter CSC00_4552 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_4552 PF00005 ABC transporter CSC00_4553 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4554 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_4557 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSC00_4558 PF08220 DeoR-like helix-turn-helix domain CSC00_4558 PF00455 DeoR C terminal sensor domain CSC00_4560 PF00484 Carbonic anhydrase CSC00_4565 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CSC00_4565 PF00753 Metallo-beta-lactamase superfamily CSC00_4565 PF10996 Beta-Casp domain CSC00_4567 PF03466 LysR substrate binding domain CSC00_4567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4570 PF05598 Transposase domain (DUF772) CSC00_4570 PF01609 Transposase DDE domain CSC00_4574 PF03641 Possible lysine decarboxylase CSC00_4576 PF01554 MatE CSC00_4577 PF00677 Lumazine binding domain CSC00_4579 PF07690 Major Facilitator Superfamily CSC00_4580 PF00356 Bacterial regulatory proteins, lacI family CSC00_4581 PF07690 Major Facilitator Superfamily CSC00_4582 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CSC00_4582 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CSC00_4584 PF00877 NlpC/P60 family CSC00_4585 PF00462 Glutaredoxin CSC00_4586 PF00929 Exonuclease CSC00_4587 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSC00_4588 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSC00_4589 PF16925 Tetracyclin repressor-like, C-terminal domain CSC00_4589 PF00440 Bacterial regulatory proteins, tetR family CSC00_4590 PF06945 Protein of unknown function (DUF1289) CSC00_4591 PF00248 Aldo/keto reductase family CSC00_4592 PF00080 Copper/zinc superoxide dismutase (SODC) CSC00_4593 PF04632 Fusaric acid resistance protein family CSC00_4594 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_4594 PF00529 HlyD membrane-fusion protein of T1SS CSC00_4595 PF07869 Protein of unknown function (DUF1656) CSC00_4596 PF01047 MarR family CSC00_4597 PF17158 Membrane-associated sensor, integral membrane domain CSC00_4597 PF00990 Diguanylate cyclase, GGDEF domain CSC00_4598 PF05433 Glycine zipper 2TM domain CSC00_4599 PF03702 Anhydro-N-acetylmuramic acid kinase CSC00_4600 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CSC00_4601 PF01243 Pyridoxamine 5'-phosphate oxidase CSC00_4601 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CSC00_4602 PF00579 tRNA synthetases class I (W and Y) CSC00_4603 PF08543 Phosphomethylpyrimidine kinase CSC00_4604 PF02798 Glutathione S-transferase, N-terminal domain CSC00_4604 PF00043 Glutathione S-transferase, C-terminal domain CSC00_4605 PF00854 POT family CSC00_4607 PF10576 Iron-sulfur binding domain of endonuclease III CSC00_4607 PF00633 Helix-hairpin-helix motif CSC00_4607 PF00730 HhH-GPD superfamily base excision DNA repair protein CSC00_4608 PF02508 Rnf-Nqr subunit, membrane protein CSC00_4609 PF04205 FMN-binding domain CSC00_4610 PF03116 NQR2, RnfD, RnfE family CSC00_4611 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CSC00_4611 PF12838 4Fe-4S dicluster domain CSC00_4611 PF13375 RnfC Barrel sandwich hybrid domain CSC00_4611 PF10531 SLBB domain CSC00_4612 PF04060 Putative Fe-S cluster CSC00_4613 PF02508 Rnf-Nqr subunit, membrane protein CSC00_4614 PF10754 Protein of unknown function (DUF2569) CSC00_4615 PF05321 Haemolysin expression modulating protein CSC00_4616 PF00232 Glycosyl hydrolase family 1 CSC00_4617 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_4617 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_4618 PF00962 Adenosine/AMP deaminase CSC00_4619 PF07690 Major Facilitator Superfamily CSC00_4620 PF01638 HxlR-like helix-turn-helix CSC00_4623 PF01292 Prokaryotic cytochrome b561 CSC00_4624 PF02583 Metal-sensitive transcriptional repressor CSC00_4625 PF00107 Zinc-binding dehydrogenase CSC00_4625 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_4626 PF01011 PQQ enzyme repeat CSC00_4628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4628 PF03466 LysR substrate binding domain CSC00_4630 PF00775 Dioxygenase CSC00_4631 PF00775 Dioxygenase CSC00_4631 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CSC00_4632 PF07063 Domain of unknown function (DUF1338) CSC00_4633 PF00135 Carboxylesterase family CSC00_4634 PF00107 Zinc-binding dehydrogenase CSC00_4634 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_4635 PF04349 Periplasmic glucan biosynthesis protein, MdoG CSC00_4636 PF13302 Acetyltransferase (GNAT) domain CSC00_4637 PF18836 Beta solenoid repeat from YDCK CSC00_4638 PF03595 Voltage-dependent anion channel CSC00_4639 PF03848 Tellurite resistance protein TehB CSC00_4641 PF11769 Protein of unknown function (DUF3313) CSC00_4643 PF12833 Helix-turn-helix domain CSC00_4643 PF06445 GyrI-like small molecule binding domain CSC00_4644 PF03594 Benzoate membrane transport protein CSC00_4645 PF07883 Cupin domain CSC00_4645 PF01381 Helix-turn-helix CSC00_4647 PF12392 Collagenase CSC00_4647 PF01136 Peptidase family U32 CSC00_4651 PF02322 Cytochrome bd terminal oxidase subunit II CSC00_4652 PF01654 Cytochrome bd terminal oxidase subunit I CSC00_4653 PF00155 Aminotransferase class I and II CSC00_4653 PF00392 Bacterial regulatory proteins, gntR family CSC00_4654 PF13416 Bacterial extracellular solute-binding protein CSC00_4655 PF00005 ABC transporter CSC00_4655 PF08402 TOBE domain CSC00_4656 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4657 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4658 PF00171 Aldehyde dehydrogenase family CSC00_4661 PF10753 Toxin GhoT_OrtT CSC00_4662 PF00561 alpha/beta hydrolase fold CSC00_4662 PF00364 Biotin-requiring enzyme CSC00_4663 PF00171 Aldehyde dehydrogenase family CSC00_4665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_4666 PF10735 Protein of unknown function (DUF2526) CSC00_4667 PF04657 Putative inner membrane exporter, YdcZ CSC00_4668 PF00583 Acetyltransferase (GNAT) family CSC00_4669 PF08671 Anti-repressor SinI CSC00_4669 PF01381 Helix-turn-helix CSC00_4670 PF00107 Zinc-binding dehydrogenase CSC00_4670 PF16884 N-terminal domain of oxidoreductase CSC00_4671 PF01156 Inosine-uridine preferring nucleoside hydrolase CSC00_4673 PF04175 Protein of unknown function (DUF406) CSC00_4674 PF01979 Amidohydrolase family CSC00_4675 PF00593 TonB dependent receptor CSC00_4675 PF07715 TonB-dependent Receptor Plug Domain CSC00_4678 PF00324 Amino acid permease CSC00_4679 PF03466 LysR substrate binding domain CSC00_4679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4680 PF01202 Shikimate kinase CSC00_4681 PF00296 Luciferase-like monooxygenase CSC00_4683 PF00296 Luciferase-like monooxygenase CSC00_4686 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4687 PF00005 ABC transporter CSC00_4689 PF13417 Glutathione S-transferase, N-terminal domain CSC00_4690 PF01361 Tautomerase enzyme CSC00_4691 PF02264 LamB porin CSC00_4691 PF11471 Maltoporin periplasmic N-terminal extension CSC00_4694 PF02311 AraC-like ligand binding domain CSC00_4694 PF12833 Helix-turn-helix domain CSC00_4695 PF01613 Flavin reductase like domain CSC00_4696 PF00005 ABC transporter CSC00_4696 PF17912 MalK OB fold domain CSC00_4698 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4699 PF00797 N-acetyltransferase CSC00_4700 PF02665 Nitrate reductase gamma subunit CSC00_4701 PF02613 Nitrate reductase delta subunit CSC00_4702 PF13247 4Fe-4S dicluster domain CSC00_4702 PF14711 Respiratory nitrate reductase beta C-terminal CSC00_4703 PF01568 Molydopterin dinucleotide binding domain CSC00_4703 PF00384 Molybdopterin oxidoreductase CSC00_4703 PF14710 Respiratory nitrate reductase alpha N-terminal CSC00_4704 PF07690 Major Facilitator Superfamily CSC00_4706 PF07690 Major Facilitator Superfamily CSC00_4707 PF01614 Bacterial transcriptional regulator CSC00_4707 PF09339 IclR helix-turn-helix domain CSC00_4708 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSC00_4708 PF13378 Enolase C-terminal domain-like CSC00_4709 PF02426 Muconolactone delta-isomerase CSC00_4710 PF04444 Catechol dioxygenase N terminus CSC00_4710 PF00775 Dioxygenase CSC00_4711 PF00355 Rieske [2Fe-2S] domain CSC00_4711 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CSC00_4712 PF00866 Ring hydroxylating beta subunit CSC00_4713 PF00970 Oxidoreductase FAD-binding domain CSC00_4713 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_4713 PF00175 Oxidoreductase NAD-binding domain CSC00_4714 PF00106 short chain dehydrogenase CSC00_4715 PF00892 EamA-like transporter family CSC00_4716 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_4716 PF01568 Molydopterin dinucleotide binding domain CSC00_4716 PF00384 Molybdopterin oxidoreductase CSC00_4717 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_4717 PF00384 Molybdopterin oxidoreductase CSC00_4717 PF01568 Molydopterin dinucleotide binding domain CSC00_4718 PF09163 Formate dehydrogenase N, transmembrane CSC00_4718 PF13247 4Fe-4S dicluster domain CSC00_4718 PF12800 4Fe-4S binding domain CSC00_4719 PF01292 Prokaryotic cytochrome b561 CSC00_4722 PF03976 Polyphosphate kinase 2 (PPK2) CSC00_4724 PF07690 Major Facilitator Superfamily CSC00_4726 PF00296 Luciferase-like monooxygenase CSC00_4727 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_4727 PF00005 ABC transporter CSC00_4729 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_4731 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_4731 PF00107 Zinc-binding dehydrogenase CSC00_4733 PF00719 Inorganic pyrophosphatase CSC00_4735 PF12848 ABC transporter CSC00_4735 PF00005 ABC transporter CSC00_4737 PF00390 Malic enzyme, N-terminal domain CSC00_4737 PF03949 Malic enzyme, NAD binding domain CSC00_4739 PF08136 30S ribosomal protein subunit S22 family CSC00_4741 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4741 PF03466 LysR substrate binding domain CSC00_4742 PF10820 Protein of unknown function (DUF2543) CSC00_4744 PF10685 Stress-induced bacterial acidophilic repeat motif CSC00_4746 PF05974 Domain of unknown function (DUF892) CSC00_4748 PF00128 Alpha amylase, catalytic domain CSC00_4748 PF16657 Maltogenic Amylase, C-terminal domain CSC00_4749 PF00106 short chain dehydrogenase CSC00_4750 PF04239 Protein of unknown function (DUF421) CSC00_4752 PF05598 Transposase domain (DUF772) CSC00_4752 PF01609 Transposase DDE domain CSC00_4753 PF04076 Bacterial OB fold (BOF) protein CSC00_4755 PF02566 OsmC-like protein CSC00_4758 PF01545 Cation efflux family CSC00_4758 PF16916 Dimerisation domain of Zinc Transporter CSC00_4759 PF01062 Bestrophin, RFP-TM, chloride channel CSC00_4760 PF00384 Molybdopterin oxidoreductase CSC00_4761 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4761 PF03466 LysR substrate binding domain CSC00_4762 PF00083 Sugar (and other) transporter CSC00_4763 PF02308 MgtC family CSC00_4764 PF03969 AFG1-like ATPase CSC00_4765 PF00141 Peroxidase CSC00_4766 PF03466 LysR substrate binding domain CSC00_4766 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4769 PF00905 Penicillin binding protein transpeptidase domain CSC00_4769 PF03717 Penicillin-binding Protein dimerisation domain CSC00_4770 PF00117 Glutamine amidotransferase class-I CSC00_4770 PF02540 NAD synthase CSC00_4770 PF00958 GMP synthase C terminal domain CSC00_4771 PF00675 Insulinase (Peptidase family M16) CSC00_4772 PF04055 Radical SAM superfamily CSC00_4772 PF13186 Iron-sulfur cluster-binding domain CSC00_4773 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CSC00_4774 PF03070 TENA/THI-4/PQQC family CSC00_4775 PF12706 Beta-lactamase superfamily domain CSC00_4776 PF01244 Membrane dipeptidase (Peptidase family M19) CSC00_4777 PF00561 alpha/beta hydrolase fold CSC00_4778 PF00486 Transcriptional regulatory protein, C terminal CSC00_4778 PF00072 Response regulator receiver domain CSC00_4779 PF00672 HAMP domain CSC00_4779 PF00512 His Kinase A (phospho-acceptor) domain CSC00_4779 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_4780 PF00578 AhpC/TSA family CSC00_4780 PF17991 Thioredoxin like C-terminal domain CSC00_4780 PF02683 Cytochrome C biogenesis protein transmembrane region CSC00_4782 PF00282 Pyridoxal-dependent decarboxylase conserved domain CSC00_4783 PF00202 Aminotransferase class-III CSC00_4784 PF09084 NMT1/THI5 like CSC00_4785 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4786 PF00005 ABC transporter CSC00_4787 PF03070 TENA/THI-4/PQQC family CSC00_4789 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_4789 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_4791 PF00356 Bacterial regulatory proteins, lacI family CSC00_4792 PF00990 Diguanylate cyclase, GGDEF domain CSC00_4792 PF08448 PAS fold CSC00_4793 PF01979 Amidohydrolase family CSC00_4794 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CSC00_4796 PF01177 Asp/Glu/Hydantoin racemase CSC00_4802 PF01965 DJ-1/PfpI family CSC00_4804 PF02525 Flavodoxin-like fold CSC00_4806 PF00117 Glutamine amidotransferase class-I CSC00_4807 PF02311 AraC-like ligand binding domain CSC00_4807 PF12833 Helix-turn-helix domain CSC00_4810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4810 PF03466 LysR substrate binding domain CSC00_4813 PF00109 Beta-ketoacyl synthase, N-terminal domain CSC00_4813 PF02801 Beta-ketoacyl synthase, C-terminal domain CSC00_4814 PF07690 Major Facilitator Superfamily CSC00_4815 PF13533 Biotin-lipoyl like CSC00_4817 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSC00_4817 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSC00_4820 PF01425 Amidase CSC00_4826 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4828 PF00005 ABC transporter CSC00_4829 PF00266 Aminotransferase class-V CSC00_4830 PF01546 Peptidase family M20/M25/M40 CSC00_4830 PF07687 Peptidase dimerisation domain CSC00_4831 PF03060 Nitronate monooxygenase CSC00_4832 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4832 PF03466 LysR substrate binding domain CSC00_4834 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSC00_4835 PF13454 FAD-NAD(P)-binding CSC00_4836 PF00083 Sugar (and other) transporter CSC00_4836 PF07690 Major Facilitator Superfamily CSC00_4839 PF00440 Bacterial regulatory proteins, tetR family CSC00_4842 PF07690 Major Facilitator Superfamily CSC00_4844 PF00356 Bacterial regulatory proteins, lacI family CSC00_4845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_4847 PF03611 PTS system sugar-specific permease component CSC00_4848 PF00834 Ribulose-phosphate 3 epimerase family CSC00_4850 PF13737 Transposase DDE domain CSC00_4851 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_4852 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSC00_4852 PF02378 Phosphotransferase system, EIIC CSC00_4853 PF01810 LysE type translocator CSC00_4855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4855 PF03466 LysR substrate binding domain CSC00_4856 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4856 PF03466 LysR substrate binding domain CSC00_4857 PF00753 Metallo-beta-lactamase superfamily CSC00_4859 PF01546 Peptidase family M20/M25/M40 CSC00_4859 PF07687 Peptidase dimerisation domain CSC00_4861 PF02126 Phosphotriesterase family CSC00_4862 PF02653 Branched-chain amino acid transport system / permease component CSC00_4863 PF00005 ABC transporter CSC00_4864 PF00356 Bacterial regulatory proteins, lacI family CSC00_4866 PF00294 pfkB family carbohydrate kinase CSC00_4870 PF01476 LysM domain CSC00_4870 PF04972 BON domain CSC00_4871 PF07690 Major Facilitator Superfamily CSC00_4873 PF00672 HAMP domain CSC00_4873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_4873 PF00512 His Kinase A (phospho-acceptor) domain CSC00_4874 PF02954 Bacterial regulatory protein, Fis family CSC00_4874 PF14532 Sigma-54 interaction domain CSC00_4874 PF00072 Response regulator receiver domain CSC00_4875 PF04229 GrpB protein CSC00_4875 PF13673 Acetyltransferase (GNAT) domain CSC00_4877 PF03466 LysR substrate binding domain CSC00_4877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4878 PF00248 Aldo/keto reductase family CSC00_4879 PF00248 Aldo/keto reductase family CSC00_4880 PF08450 SMP-30/Gluconolactonase/LRE-like region CSC00_4881 PF00248 Aldo/keto reductase family CSC00_4886 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSC00_4886 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSC00_4887 PF12833 Helix-turn-helix domain CSC00_4887 PF01965 DJ-1/PfpI family CSC00_4889 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CSC00_4892 PF08220 DeoR-like helix-turn-helix domain CSC00_4892 PF00455 DeoR C terminal sensor domain CSC00_4893 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSC00_4893 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSC00_4894 PF01791 DeoC/LacD family aldolase CSC00_4895 PF00455 DeoR C terminal sensor domain CSC00_4895 PF08220 DeoR-like helix-turn-helix domain CSC00_4896 PF00834 Ribulose-phosphate 3 epimerase family CSC00_4897 PF00294 pfkB family carbohydrate kinase CSC00_4898 PF07690 Major Facilitator Superfamily CSC00_4900 PF13193 AMP-binding enzyme C-terminal domain CSC00_4900 PF00501 AMP-binding enzyme CSC00_4901 PF01144 Coenzyme A transferase CSC00_4903 PF00108 Thiolase, N-terminal domain CSC00_4903 PF02803 Thiolase, C-terminal domain CSC00_4904 PF07690 Major Facilitator Superfamily CSC00_4905 PF08450 SMP-30/Gluconolactonase/LRE-like region CSC00_4907 PF02595 Glycerate kinase family CSC00_4908 PF17853 GGDEF-like domain CSC00_4908 PF05651 Putative sugar diacid recognition CSC00_4908 PF13556 PucR C-terminal helix-turn-helix domain CSC00_4909 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSC00_4909 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CSC00_4910 PF03466 LysR substrate binding domain CSC00_4910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4912 PF07729 FCD domain CSC00_4912 PF00392 Bacterial regulatory proteins, gntR family CSC00_4913 PF02378 Phosphotransferase system, EIIC CSC00_4913 PF00367 phosphotransferase system, EIIB CSC00_4914 PF02056 Family 4 glycosyl hydrolase CSC00_4914 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSC00_4916 PF00083 Sugar (and other) transporter CSC00_4917 PF00381 PTS HPr component phosphorylation site CSC00_4917 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSC00_4920 PF00756 Putative esterase CSC00_4921 PF13188 PAS domain CSC00_4921 PF03707 Bacterial signalling protein N terminal repeat CSC00_4921 PF00990 Diguanylate cyclase, GGDEF domain CSC00_4921 PF00563 EAL domain CSC00_4924 PF00557 Metallopeptidase family M24 CSC00_4927 PF02753 Pili assembly chaperone PapD, C-terminal domain CSC00_4927 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CSC00_4928 PF13953 PapC C-terminal domain CSC00_4928 PF13954 PapC N-terminal domain CSC00_4928 PF00577 Outer membrane usher protein CSC00_4931 PF13657 HipA N-terminal domain CSC00_4931 PF07804 HipA-like C-terminal domain CSC00_4932 PF01381 Helix-turn-helix CSC00_4933 PF00576 HIUase/Transthyretin family CSC00_4934 PF01014 Uricase CSC00_4934 PF09349 OHCU decarboxylase CSC00_4935 PF00860 Permease family CSC00_4936 PF01494 FAD binding domain CSC00_4937 PF03466 LysR substrate binding domain CSC00_4937 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4938 PF00355 Rieske [2Fe-2S] domain CSC00_4939 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_4940 PF00239 Resolvase, N terminal domain CSC00_4940 PF02796 Helix-turn-helix domain of resolvase CSC00_4941 PF01526 Tn3 transposase DDE domain CSC00_4941 PF13700 Domain of unknown function (DUF4158) CSC00_4942 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_4942 PF00175 Oxidoreductase NAD-binding domain CSC00_4943 PF07690 Major Facilitator Superfamily CSC00_4944 PF12833 Helix-turn-helix domain CSC00_4947 PF09905 DNA-binding protein VF530 CSC00_4949 PF03180 NLPA lipoprotein CSC00_4950 PF09383 NIL domain CSC00_4950 PF00005 ABC transporter CSC00_4951 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_4952 PF03060 Nitronate monooxygenase CSC00_4953 PF03466 LysR substrate binding domain CSC00_4953 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4954 PF06779 Uncharacterised MFS-type transporter YbfB CSC00_4956 PF07690 Major Facilitator Superfamily CSC00_4958 PF13649 Methyltransferase domain CSC00_4965 PF00583 Acetyltransferase (GNAT) family CSC00_4966 PF01232 Mannitol dehydrogenase Rossmann domain CSC00_4966 PF08125 Mannitol dehydrogenase C-terminal domain CSC00_4968 PF00990 Diguanylate cyclase, GGDEF domain CSC00_4969 PF13811 Domain of unknown function (DUF4186) CSC00_4970 PF04960 Glutaminase CSC00_4971 PF00171 Aldehyde dehydrogenase family CSC00_4972 PF03466 LysR substrate binding domain CSC00_4972 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_4973 PF00583 Acetyltransferase (GNAT) family CSC00_4974 PF00056 lactate/malate dehydrogenase, NAD binding domain CSC00_4974 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CSC00_4975 PF00455 DeoR C terminal sensor domain CSC00_4975 PF08220 DeoR-like helix-turn-helix domain CSC00_4976 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CSC00_4977 PF17042 Nucleotide-binding C-terminal domain CSC00_4977 PF07005 Sugar-binding N-terminal domain CSC00_4978 PF00465 Iron-containing alcohol dehydrogenase CSC00_4979 PF00701 Dihydrodipicolinate synthetase family CSC00_4982 PF04074 YhcH/YjgK/YiaL CSC00_4984 PF02567 Phenazine biosynthesis-like protein CSC00_4985 PF07690 Major Facilitator Superfamily CSC00_4986 PF01914 MarC family integral membrane protein CSC00_4988 PF01047 MarR family CSC00_4989 PF12833 Helix-turn-helix domain CSC00_4990 PF13999 MarB protein CSC00_4991 PF00892 EamA-like transporter family CSC00_4992 PF07690 Major Facilitator Superfamily CSC00_4994 PF00005 ABC transporter CSC00_4995 PF00005 ABC transporter CSC00_4996 PF02653 Branched-chain amino acid transport system / permease component CSC00_4997 PF02653 Branched-chain amino acid transport system / permease component CSC00_4998 PF13458 Periplasmic binding protein CSC00_4999 PF01717 Cobalamin-independent synthase, Catalytic domain CSC00_5001 PF01965 DJ-1/PfpI family CSC00_5001 PF12833 Helix-turn-helix domain CSC00_5005 PF00356 Bacterial regulatory proteins, lacI family CSC00_5006 PF00703 Glycosyl hydrolases family 2 CSC00_5006 PF02929 Beta galactosidase small chain CSC00_5006 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CSC00_5006 PF02837 Glycosyl hydrolases family 2, sugar binding domain CSC00_5006 PF16353 Domain of unknown function(DUF4981) CSC00_5007 PF01306 LacY proton/sugar symporter CSC00_5008 PF02463 RecF/RecN/SMC N terminal domain CSC00_5011 PF08220 DeoR-like helix-turn-helix domain CSC00_5011 PF00455 DeoR C terminal sensor domain CSC00_5012 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSC00_5012 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CSC00_5013 PF17042 Nucleotide-binding C-terminal domain CSC00_5013 PF07005 Sugar-binding N-terminal domain CSC00_5014 PF00596 Class II Aldolase and Adducin N-terminal domain CSC00_5015 PF01261 Xylose isomerase-like TIM barrel CSC00_5016 PF02447 GntP family permease CSC00_5017 PF12833 Helix-turn-helix domain CSC00_5018 PF05598 Transposase domain (DUF772) CSC00_5018 PF01609 Transposase DDE domain CSC00_5021 PF00563 EAL domain CSC00_5021 PF04940 Sensors of blue-light using FAD CSC00_5022 PF02464 Competence-damaged protein CSC00_5023 PF00011 Hsp20/alpha crystallin family CSC00_5025 PF00072 Response regulator receiver domain CSC00_5025 PF00196 Bacterial regulatory proteins, luxR family CSC00_5028 PF02586 SOS response associated peptidase (SRAP) CSC00_5029 PF12833 Helix-turn-helix domain CSC00_5029 PF02311 AraC-like ligand binding domain CSC00_5032 PF01432 Peptidase family M3 CSC00_5033 PF00106 short chain dehydrogenase CSC00_5034 PF07729 FCD domain CSC00_5034 PF00392 Bacterial regulatory proteins, gntR family CSC00_5035 PF00582 Universal stress protein family CSC00_5036 PF08125 Mannitol dehydrogenase C-terminal domain CSC00_5036 PF01232 Mannitol dehydrogenase Rossmann domain CSC00_5037 PF07690 Major Facilitator Superfamily CSC00_5038 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CSC00_5039 PF06932 Protein of unknown function (DUF1283) CSC00_5040 PF13302 Acetyltransferase (GNAT) domain CSC00_5041 PF06788 Uncharacterised protein family (UPF0257) CSC00_5042 PF06649 Protein of unknown function (DUF1161) CSC00_5043 PF01568 Molydopterin dinucleotide binding domain CSC00_5043 PF00384 Molybdopterin oxidoreductase CSC00_5043 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSC00_5044 PF13247 4Fe-4S dicluster domain CSC00_5044 PF12800 4Fe-4S binding domain CSC00_5045 PF04976 DMSO reductase anchor subunit (DmsC) CSC00_5046 PF02613 Nitrate reductase delta subunit CSC00_5047 PF00654 Voltage gated chloride channel CSC00_5049 PF00480 ROK family CSC00_5050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5050 PF03466 LysR substrate binding domain CSC00_5051 PF07690 Major Facilitator Superfamily CSC00_5052 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CSC00_5055 PF00089 Trypsin CSC00_5057 PF00893 Small Multidrug Resistance protein CSC00_5058 PF00893 Small Multidrug Resistance protein CSC00_5059 PF01594 AI-2E family transporter CSC00_5060 PF16957 Malonate decarboxylase, alpha subunit, transporter CSC00_5061 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CSC00_5062 PF06857 Malonate decarboxylase delta subunit (MdcD) CSC00_5063 PF01039 Carboxyl transferase domain CSC00_5065 PF03547 Membrane transport protein CSC00_5066 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CSC00_5067 PF00698 Acyl transferase domain CSC00_5068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5068 PF03466 LysR substrate binding domain CSC00_5069 PF06039 Malate:quinone oxidoreductase (Mqo) CSC00_5070 PF13580 SIS domain CSC00_5072 PF00989 PAS fold CSC00_5072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_5072 PF17203 Single cache domain 3 CSC00_5072 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CSC00_5073 PF00072 Response regulator receiver domain CSC00_5074 PF02424 ApbE family CSC00_5075 PF14537 Cytochrome c3 CSC00_5075 PF00890 FAD binding domain CSC00_5077 PF00939 Sodium:sulfate symporter transmembrane region CSC00_5078 PF05683 Fumarase C-terminus CSC00_5078 PF05681 Fumarate hydratase (Fumerase) CSC00_5080 PF02627 Carboxymuconolactone decarboxylase family CSC00_5081 PF12146 Serine aminopeptidase, S33 CSC00_5082 PF10397 Adenylosuccinate lyase C-terminus CSC00_5082 PF00206 Lyase CSC00_5083 PF02803 Thiolase, C-terminal domain CSC00_5083 PF00108 Thiolase, N-terminal domain CSC00_5084 PF01144 Coenzyme A transferase CSC00_5085 PF01144 Coenzyme A transferase CSC00_5086 PF09339 IclR helix-turn-helix domain CSC00_5086 PF01614 Bacterial transcriptional regulator CSC00_5087 PF01713 Smr domain CSC00_5088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5088 PF03466 LysR substrate binding domain CSC00_5089 PF07687 Peptidase dimerisation domain CSC00_5089 PF01546 Peptidase family M20/M25/M40 CSC00_5090 PF01546 Peptidase family M20/M25/M40 CSC00_5091 PF01546 Peptidase family M20/M25/M40 CSC00_5092 PF03806 AbgT putative transporter family CSC00_5094 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CSC00_5094 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSC00_5095 PF00325 Bacterial regulatory proteins, crp family CSC00_5095 PF00027 Cyclic nucleotide-binding domain CSC00_5096 PF00582 Universal stress protein family CSC00_5097 PF15930 Domain of unknown function CSC00_5098 PF02233 NAD(P) transhydrogenase beta subunit CSC00_5099 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CSC00_5099 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CSC00_5099 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CSC00_5102 PF07338 Protein of unknown function (DUF1471) CSC00_5103 PF13520 Amino acid permease CSC00_5105 PF06942 GlpM protein CSC00_5106 PF00486 Transcriptional regulatory protein, C terminal CSC00_5106 PF00072 Response regulator receiver domain CSC00_5108 PF00672 HAMP domain CSC00_5108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_5108 PF00512 His Kinase A (phospho-acceptor) domain CSC00_5109 PF05472 DNA replication terminus site-binding protein (Ter protein) CSC00_5110 PF00206 Lyase CSC00_5110 PF10415 Fumarase C C-terminus CSC00_5111 PF05683 Fumarase C-terminus CSC00_5111 PF05681 Fumarate hydratase (Fumerase) CSC00_5112 PF01238 Phosphomannose isomerase type I CSC00_5113 PF06097 Bacterial protein of unknown function (DUF945) CSC00_5114 PF00356 Bacterial regulatory proteins, lacI family CSC00_5114 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSC00_5115 PF02378 Phosphotransferase system, EIIC CSC00_5115 PF00367 phosphotransferase system, EIIB CSC00_5116 PF00155 Aminotransferase class I and II CSC00_5118 PF14001 YdfZ protein CSC00_5121 PF04143 Sulphur transport CSC00_5122 PF01206 Sulfurtransferase TusA CSC00_5123 PF07166 Protein of unknown function (DUF1398) CSC00_5124 PF01679 Proteolipid membrane potential modulator CSC00_5125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSC00_5125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSC00_5126 PF00171 Aldehyde dehydrogenase family CSC00_5128 PF02698 DUF218 domain CSC00_5129 PF07690 Major Facilitator Superfamily CSC00_5129 PF00083 Sugar (and other) transporter CSC00_5130 PF00324 Amino acid permease CSC00_5131 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CSC00_5132 PF04996 Succinylarginine dihydrolase CSC00_5133 PF00171 Aldehyde dehydrogenase family CSC00_5134 PF04958 Arginine N-succinyltransferase beta subunit CSC00_5135 PF00202 Aminotransferase class-III CSC00_5138 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CSC00_5138 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CSC00_5139 PF00248 Aldo/keto reductase family CSC00_5140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5140 PF03466 LysR substrate binding domain CSC00_5143 PF13533 Biotin-lipoyl like CSC00_5144 PF02321 Outer membrane efflux protein CSC00_5145 PF01596 O-methyltransferase CSC00_5146 PF11898 Domain of unknown function (DUF3418) CSC00_5146 PF00270 DEAD/DEAH box helicase CSC00_5146 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CSC00_5146 PF00271 Helicase conserved C-terminal domain CSC00_5146 PF04408 Helicase associated domain (HA2) CSC00_5147 PF02525 Flavodoxin-like fold CSC00_5149 PF00132 Bacterial transferase hexapeptide (six repeats) CSC00_5150 PF07848 PaaX-like protein CSC00_5150 PF08223 PaaX-like protein C-terminal domain CSC00_5151 PF14535 AMP-binding enzyme C-terminal domain CSC00_5151 PF00501 AMP-binding enzyme CSC00_5152 PF00108 Thiolase, N-terminal domain CSC00_5152 PF02803 Thiolase, C-terminal domain CSC00_5153 PF03061 Thioesterase superfamily CSC00_5154 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSC00_5154 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSC00_5154 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CSC00_5155 PF00378 Enoyl-CoA hydratase/isomerase CSC00_5156 PF00378 Enoyl-CoA hydratase/isomerase CSC00_5157 PF00111 2Fe-2S iron-sulfur cluster binding domain CSC00_5157 PF00175 Oxidoreductase NAD-binding domain CSC00_5157 PF00970 Oxidoreductase FAD-binding domain CSC00_5158 PF01883 Iron-sulfur cluster assembly protein CSC00_5159 PF05138 Phenylacetic acid catabolic protein CSC00_5160 PF06243 Phenylacetic acid degradation B CSC00_5161 PF05138 Phenylacetic acid catabolic protein CSC00_5162 PF00171 Aldehyde dehydrogenase family CSC00_5162 PF01575 MaoC like domain CSC00_5163 PF02727 Copper amine oxidase, N2 domain CSC00_5163 PF07833 Copper amine oxidase N-terminal domain CSC00_5163 PF01179 Copper amine oxidase, enzyme domain CSC00_5163 PF02728 Copper amine oxidase, N3 domain CSC00_5165 PF02558 Ketopantoate reductase PanE/ApbA CSC00_5165 PF08546 Ketopantoate reductase PanE/ApbA C terminal CSC00_5166 PF00171 Aldehyde dehydrogenase family CSC00_5167 PF12833 Helix-turn-helix domain CSC00_5167 PF14525 AraC-binding-like domain CSC00_5168 PF07027 Protein of unknown function (DUF1318) CSC00_5169 PF13617 YnbE-like lipoprotein CSC00_5170 PF11739 Dicarboxylate transport CSC00_5171 PF09335 SNARE associated Golgi protein CSC00_5172 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSC00_5172 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_5173 PF03724 META domain CSC00_5174 PF03891 Domain of unknown function (DUF333) CSC00_5175 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CSC00_5175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSC00_5175 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CSC00_5175 PF10371 Domain of unknown function CSC00_5175 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CSC00_5176 PF00267 Gram-negative porin CSC00_5178 PF00582 Universal stress protein family CSC00_5179 PF01171 PP-loop family CSC00_5180 PF03880 DbpA RNA binding domain CSC00_5180 PF00270 DEAD/DEAH box helicase CSC00_5180 PF00271 Helicase conserved C-terminal domain CSC00_5181 PF01544 CorA-like Mg2+ transporter protein CSC00_5182 PF00455 DeoR C terminal sensor domain CSC00_5182 PF08220 DeoR-like helix-turn-helix domain CSC00_5183 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSC00_5183 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSC00_5186 PF00324 Amino acid permease CSC00_5187 PF01037 Lrp/AsnC ligand binding domain CSC00_5189 PF00155 Aminotransferase class I and II CSC00_5190 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_5191 PF00005 ABC transporter CSC00_5191 PF09383 NIL domain CSC00_5192 PF03180 NLPA lipoprotein CSC00_5193 PF00155 Aminotransferase class I and II CSC00_5195 PF00440 Bacterial regulatory proteins, tetR family CSC00_5197 PF00753 Metallo-beta-lactamase superfamily CSC00_5198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5198 PF03466 LysR substrate binding domain CSC00_5199 PF03466 LysR substrate binding domain CSC00_5199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5204 PF00440 Bacterial regulatory proteins, tetR family CSC00_5224 PF10431 C-terminal, D2-small domain, of ClpB protein CSC00_5224 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_5224 PF07724 AAA domain (Cdc48 subfamily) CSC00_5224 PF17871 AAA lid domain CSC00_5226 PF00691 OmpA family CSC00_5226 PF13488 Glycine zipper CSC00_5232 PF06183 DinI-like family CSC00_5249 PF01551 Peptidase family M23 CSC00_5249 PF01464 Transglycosylase SLT domain CSC00_5249 PF10145 Phage-related minor tail protein CSC00_5253 PF01527 Transposase CSC00_5254 PF13276 HTH-like domain CSC00_5254 PF00665 Integrase core domain CSC00_5254 PF13333 Integrase core domain CSC00_5264 PF06381 Protein of unknown function (DUF1073) CSC00_5265 PF17288 Terminase RNAseH like domain CSC00_5265 PF04466 Phage terminase large subunit CSC00_5268 PF00959 Phage lysozyme CSC00_5272 PF03589 Antitermination protein CSC00_5290 PF00589 Phage integrase family CSC00_5290 PF13356 Arm DNA-binding domain CSC00_5290 PF14659 Phage integrase, N-terminal SAM-like domain CSC00_5291 PF01965 DJ-1/PfpI family CSC00_5292 PF01966 HD domain CSC00_5294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5294 PF03466 LysR substrate binding domain CSC00_5297 PF00248 Aldo/keto reductase family CSC00_5298 PF07690 Major Facilitator Superfamily CSC00_5299 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CSC00_5300 PF03466 LysR substrate binding domain CSC00_5300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5303 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_5305 PF00246 Zinc carboxypeptidase CSC00_5306 PF13378 Enolase C-terminal domain-like CSC00_5306 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSC00_5307 PF08534 Redoxin CSC00_5308 PF05145 Transition state regulatory protein AbrB CSC00_5309 PF18024 Helix-turn-helix domain CSC00_5309 PF00158 Sigma-54 interaction domain CSC00_5310 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSC00_5310 PF02056 Family 4 glycosyl hydrolase CSC00_5311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5311 PF03466 LysR substrate binding domain CSC00_5312 PF05128 Domain of unknown function (DUF697) CSC00_5313 PF04317 YcjX-like family, DUF463 CSC00_5314 PF09584 Phage shock protein PspD (Phageshock_PspD) CSC00_5315 PF04024 PspC domain CSC00_5316 PF06667 Phage shock protein B CSC00_5317 PF04012 PspA/IM30 family CSC00_5318 PF02954 Bacterial regulatory protein, Fis family CSC00_5318 PF00158 Sigma-54 interaction domain CSC00_5319 PF07690 Major Facilitator Superfamily CSC00_5320 PF07687 Peptidase dimerisation domain CSC00_5320 PF01546 Peptidase family M20/M25/M40 CSC00_5321 PF12833 Helix-turn-helix domain CSC00_5323 PF13460 NAD(P)H-binding CSC00_5324 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_5325 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_5326 PF02586 SOS response associated peptidase (SRAP) CSC00_5329 PF11799 impB/mucB/samB family C-terminal domain CSC00_5329 PF11798 IMS family HHH motif CSC00_5329 PF13438 Domain of unknown function (DUF4113) CSC00_5329 PF00817 impB/mucB/samB family CSC00_5330 PF00717 Peptidase S24-like CSC00_5331 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSC00_5339 PF00990 Diguanylate cyclase, GGDEF domain CSC00_5339 PF00563 EAL domain CSC00_5339 PF13188 PAS domain CSC00_5339 PF03707 Bacterial signalling protein N terminal repeat CSC00_5340 PF05052 MerE protein CSC00_5341 PF13411 MerR HTH family regulatory protein CSC00_5342 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSC00_5342 PF00403 Heavy-metal-associated domain CSC00_5342 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSC00_5343 PF03203 MerC mercury resistance protein CSC00_5344 PF03400 IS1 transposase CSC00_5345 PF12759 InsA C-terminal domain CSC00_5345 PF03811 InsA N-terminal domain CSC00_5346 PF02463 RecF/RecN/SMC N terminal domain CSC00_5347 PF01850 PIN domain CSC00_5348 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSC00_5351 PF00589 Phage integrase family CSC00_5353 PF13700 Domain of unknown function (DUF4158) CSC00_5353 PF01526 Tn3 transposase DDE domain CSC00_5354 PF02796 Helix-turn-helix domain of resolvase CSC00_5354 PF00239 Resolvase, N terminal domain CSC00_5356 PF13610 DDE domain CSC00_5357 PF01051 Initiator Replication protein CSC00_5358 PF18607 ParA helix turn helix domain CSC00_5358 PF13614 AAA domain CSC00_5359 PF02195 ParB-like nuclease domain CSC00_5359 PF08775 ParB family CSC00_5360 PF13438 Domain of unknown function (DUF4113) CSC00_5360 PF00817 impB/mucB/samB family CSC00_5360 PF11799 impB/mucB/samB family C-terminal domain CSC00_5361 PF00717 Peptidase S24-like CSC00_5362 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSC00_5363 PF03400 IS1 transposase CSC00_5366 PF13737 Transposase DDE domain CSC00_5368 PF13737 Transposase DDE domain CSC00_5369 PF13700 Domain of unknown function (DUF4158) CSC00_5369 PF01526 Tn3 transposase DDE domain CSC00_5370 PF00239 Resolvase, N terminal domain CSC00_5370 PF02796 Helix-turn-helix domain of resolvase CSC00_5372 PF00563 EAL domain CSC00_5372 PF11809 Domain of unknown function (DUF3330) CSC00_5373 PF13495 Phage integrase, N-terminal SAM-like domain CSC00_5373 PF00589 Phage integrase family CSC00_5374 PF00561 alpha/beta hydrolase fold CSC00_5375 PF13427 Domain of unknown function (DUF4111) CSC00_5375 PF01909 Nucleotidyltransferase domain CSC00_5376 PF07690 Major Facilitator Superfamily CSC00_5377 PF13427 Domain of unknown function (DUF4111) CSC00_5377 PF01909 Nucleotidyltransferase domain CSC00_5378 PF00872 Transposase, Mutator family CSC00_5379 PF01609 Transposase DDE domain CSC00_5379 PF05598 Transposase domain (DUF772) CSC00_5381 PF00106 short chain dehydrogenase CSC00_5383 PF13610 DDE domain CSC00_5385 PF01636 Phosphotransferase enzyme family CSC00_5386 PF13610 DDE domain CSC00_5388 PF01526 Tn3 transposase DDE domain CSC00_5388 PF13700 Domain of unknown function (DUF4158) CSC00_5389 PF04754 Putative transposase, YhgA-like CSC00_5392 PF02899 Phage integrase, N-terminal SAM-like domain CSC00_5392 PF00589 Phage integrase family CSC00_5394 PF02796 Helix-turn-helix domain of resolvase CSC00_5394 PF00665 Integrase core domain CSC00_5395 PF01695 IstB-like ATP binding protein CSC00_5398 PF13808 DDE_Tnp_1-associated CSC00_5398 PF01609 Transposase DDE domain CSC00_5400 PF13737 Transposase DDE domain CSC00_5404 PF02796 Helix-turn-helix domain of resolvase CSC00_5404 PF00239 Resolvase, N terminal domain CSC00_5408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_5408 PF00672 HAMP domain CSC00_5408 PF00512 His Kinase A (phospho-acceptor) domain CSC00_5409 PF00072 Response regulator receiver domain CSC00_5409 PF00486 Transcriptional regulatory protein, C terminal CSC00_5410 PF05425 Copper resistance protein D CSC00_5411 PF04234 CopC domain CSC00_5412 PF05275 Copper resistance protein B precursor (CopB) CSC00_5413 PF07732 Multicopper oxidase CSC00_5413 PF00394 Multicopper oxidase CSC00_5413 PF07731 Multicopper oxidase CSC00_5415 PF08525 Opacity-associated protein A N-terminal motif CSC00_5415 PF01551 Peptidase family M23 CSC00_5415 PF01476 LysM domain CSC00_5417 PF04945 YHS domain CSC00_5419 PF00873 AcrB/AcrD/AcrF family CSC00_5420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSC00_5421 PF11604 Copper binding periplasmic protein CusF CSC00_5423 PF02321 Outer membrane efflux protein CSC00_5424 PF00072 Response regulator receiver domain CSC00_5424 PF00486 Transcriptional regulatory protein, C terminal CSC00_5425 PF00512 His Kinase A (phospho-acceptor) domain CSC00_5425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSC00_5425 PF00672 HAMP domain CSC00_5428 PF03400 IS1 transposase CSC00_5429 PF01527 Transposase CSC00_5430 PF13276 HTH-like domain CSC00_5430 PF00665 Integrase core domain CSC00_5431 PF03400 IS1 transposase CSC00_5432 PF02028 BCCT, betaine/carnitine/choline family transporter CSC00_5433 PF10011 Predicted membrane protein (DUF2254) CSC00_5434 PF12792 CSS motif domain associated with EAL CSC00_5434 PF00563 EAL domain CSC00_5435 PF13737 Transposase DDE domain CSC00_5436 PF00990 Diguanylate cyclase, GGDEF domain CSC00_5436 PF13185 GAF domain CSC00_5437 PF00589 Phage integrase family CSC00_5438 PF01051 Initiator Replication protein CSC00_5439 PF13614 AAA domain CSC00_5440 PF02195 ParB-like nuclease domain CSC00_5440 PF18090 Centromere-binding protein HTH domain CSC00_5442 PF12323 Helix-turn-helix domain CSC00_5442 PF07282 Putative transposase DNA-binding domain CSC00_5442 PF01385 Probable transposase CSC00_5443 PF12323 Helix-turn-helix domain CSC00_5443 PF07282 Putative transposase DNA-binding domain CSC00_5443 PF01385 Probable transposase CSC00_5445 PF11799 impB/mucB/samB family C-terminal domain CSC00_5445 PF00817 impB/mucB/samB family CSC00_5445 PF13438 Domain of unknown function (DUF4113) CSC00_5446 PF00717 Peptidase S24-like CSC00_5447 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSC00_5448 PF03230 Antirestriction protein CSC00_5456 PF00436 Single-strand binding protein family CSC00_5457 PF06006 Bacterial protein of unknown function (DUF905) CSC00_5458 PF02195 ParB-like nuclease domain CSC00_5459 PF06290 Plasmid SOS inhibition protein (PsiB) CSC00_5468 PF01381 Helix-turn-helix CSC00_5469 PF06067 Domain of unknown function (DUF932) CSC00_5470 PF01464 Transglycosylase SLT domain CSC00_5471 PF05261 TraM protein, DNA-binding CSC00_5472 PF05509 TraY domain CSC00_5473 PF05513 TraA CSC00_5474 PF07178 TraL protein CSC00_5475 PF05309 TraE protein CSC00_5476 PF06586 TraK protein CSC00_5477 PF03743 Bacterial conjugation TrbI-like protein CSC00_5483 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CSC00_5484 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CSC00_5485 PF12477 Sex factor F TraW protein N terminal CSC00_5486 PF06834 TraU protein CSC00_5487 PF09673 Type-F conjugative transfer system pilin assembly protein CSC00_5488 PF06986 Type-1V conjugative transfer system mating pair stabilisation CSC00_5489 PF11100 Conjugal transfer protein TrbE CSC00_5492 PF13728 F plasmid transfer operon protein CSC00_5493 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CSC00_5494 PF13728 F plasmid transfer operon protein CSC00_5496 PF06122 Conjugative relaxosome accessory transposon protein CSC00_5497 PF07916 TraG-like protein, N-terminal region CSC00_5498 PF05818 Enterobacterial TraT complement resistance protein CSC00_5499 PF10412 Type IV secretion-system coupling protein DNA-binding domain CSC00_5499 PF12615 F sex factor protein N terminal CSC00_5500 PF18272 single-stranded DNA binding TraI N-terminal subdomain CSC00_5500 PF18340 DNA relaxase TraI 2B/2B-like domain CSC00_5500 PF08751 TrwC relaxase CSC00_5500 PF07057 DNA helicase TraI CSC00_5501 PF05857 TraX protein CSC00_5502 PF04352 ProQ/FINO family CSC00_5502 PF12602 Fertility inhibition protein N terminal CSC00_5506 PF06958 S-type Pyocin CSC00_5508 PF02387 IncFII RepA protein family CSC00_5512 PF13737 Transposase DDE domain CSC00_5513 PF13737 Transposase DDE domain CSC00_5514 PF01306 LacY proton/sugar symporter CSC00_5515 PF02837 Glycosyl hydrolases family 2, sugar binding domain CSC00_5515 PF16353 Domain of unknown function(DUF4981) CSC00_5515 PF00703 Glycosyl hydrolases family 2 CSC00_5515 PF02929 Beta galactosidase small chain CSC00_5515 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CSC00_5516 PF00356 Bacterial regulatory proteins, lacI family CSC00_5518 PF08240 Alcohol dehydrogenase GroES-like domain CSC00_5518 PF00107 Zinc-binding dehydrogenase CSC00_5521 PF05717 IS66 Orf2 like protein CSC00_5522 PF00005 ABC transporter CSC00_5523 PF01032 FecCD transport family CSC00_5524 PF01032 FecCD transport family CSC00_5525 PF01497 Periplasmic binding protein CSC00_5526 PF07715 TonB-dependent Receptor Plug Domain CSC00_5526 PF07660 Secretin and TonB N terminus short domain CSC00_5526 PF00593 TonB dependent receptor CSC00_5527 PF16220 Domain of unknown function (DUF4880) CSC00_5527 PF04773 FecR protein CSC00_5528 PF04542 Sigma-70 region 2 CSC00_5528 PF08281 Sigma-70, region 4 CSC00_5529 PF00665 Integrase core domain CSC00_5533 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_5533 PF12911 N-terminal TM domain of oligopeptide transport permease C CSC00_5534 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_5535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSC00_5536 PF03069 Acetamidase/Formamidase family CSC00_5537 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSC00_5537 PF00005 ABC transporter CSC00_5538 PF13817 IS66 C-terminal element CSC00_5538 PF03050 Transposase IS66 family CSC00_5538 PF13005 zinc-finger binding domain of transposase IS66 CSC00_5538 PF13007 Transposase C of IS166 homeodomain CSC00_5539 PF13007 Transposase C of IS166 homeodomain CSC00_5539 PF13005 zinc-finger binding domain of transposase IS66 CSC00_5539 PF03050 Transposase IS66 family CSC00_5539 PF13817 IS66 C-terminal element CSC00_5540 PF13817 IS66 C-terminal element CSC00_5540 PF03050 Transposase IS66 family CSC00_5540 PF13007 Transposase C of IS166 homeodomain CSC00_5540 PF13005 zinc-finger binding domain of transposase IS66 CSC00_5541 PF05717 IS66 Orf2 like protein CSC00_5545 PF03400 IS1 transposase CSC00_5546 PF00302 Chloramphenicol acetyltransferase CSC00_5548 PF01526 Tn3 transposase DDE domain CSC00_5548 PF13700 Domain of unknown function (DUF4158) CSC00_5549 PF00239 Resolvase, N terminal domain CSC00_5549 PF02796 Helix-turn-helix domain of resolvase CSC00_5550 PF00563 EAL domain CSC00_5550 PF11809 Domain of unknown function (DUF3330) CSC00_5551 PF13495 Phage integrase, N-terminal SAM-like domain CSC00_5551 PF00589 Phage integrase family CSC00_5553 PF13427 Domain of unknown function (DUF4111) CSC00_5553 PF01909 Nucleotidyltransferase domain CSC00_5554 PF01527 Transposase CSC00_5555 PF13276 HTH-like domain CSC00_5555 PF00665 Integrase core domain CSC00_5555 PF13333 Integrase core domain CSC00_5556 PF01909 Nucleotidyltransferase domain CSC00_5556 PF13427 Domain of unknown function (DUF4111) CSC00_5557 PF00809 Pterin binding enzyme CSC00_5559 PF03551 Transcriptional regulator PadR-like family CSC00_5560 PF13610 DDE domain CSC00_5563 PF01636 Phosphotransferase enzyme family CSC00_5564 PF13610 DDE domain CSC00_5565 PF01636 Phosphotransferase enzyme family CSC00_5566 PF13610 DDE domain CSC00_5567 PF01526 Tn3 transposase DDE domain CSC00_5567 PF13700 Domain of unknown function (DUF4158) CSC00_5568 PF13610 DDE domain CSC00_5570 PF00005 ABC transporter CSC00_5572 PF00528 Binding-protein-dependent transport system inner membrane component CSC00_5573 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSC00_5573 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSC00_5574 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSC00_5574 PF03466 LysR substrate binding domain CSC00_5575 PF01609 Transposase DDE domain CSC00_5575 PF05598 Transposase domain (DUF772) CSC00_5576 PF01609 Transposase DDE domain CSC00_5576 PF05598 Transposase domain (DUF772) CSC00_5577 PF03400 IS1 transposase CSC00_5580 PF00011 Hsp20/alpha crystallin family CSC00_5581 PF02861 Clp amino terminal domain, pathogenicity island component CSC00_5581 PF07724 AAA domain (Cdc48 subfamily) CSC00_5581 PF17871 AAA lid domain CSC00_5581 PF00004 ATPase family associated with various cellular activities (AAA) CSC00_5581 PF10431 C-terminal, D2-small domain, of ClpB protein CSC00_5584 PF01435 Peptidase family M48 CSC00_5586 PF13333 Integrase core domain CSC00_5586 PF00665 Integrase core domain CSC00_5586 PF13276 HTH-like domain CSC00_5586 PF01527 Transposase CSC00_5590 PF05321 Haemolysin expression modulating protein CSC00_5594 PF01022 Bacterial regulatory protein, arsR family CSC00_5595 PF06953 Arsenical resistance operon trans-acting repressor ArsD CSC00_5596 PF02374 Anion-transporting ATPase CSC00_5597 PF02040 Arsenical pump membrane protein CSC00_5598 PF03960 ArsC family CSC00_5600 PF02374 Anion-transporting ATPase CSC00_5601 PF02374 Anion-transporting ATPase CSC00_5604 PF03358 NADPH-dependent FMN reductase CSC00_5607 PF00230 Major intrinsic protein CSC00_5632 PF06834 TraU protein CSC00_5635 PF00580 UvrD/REP helicase N-terminal domain CSC00_5635 PF13361 UvrD-like helicase C-terminal domain CSC00_5648 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSC00_5655 PF01051 Initiator Replication protein CSC00_5660 PF13610 DDE domain CSC00_5663 PF00239 Resolvase, N terminal domain CSC00_5663 PF02796 Helix-turn-helix domain of resolvase CSC00_5664 PF01526 Tn3 transposase DDE domain CSC00_5664 PF13700 Domain of unknown function (DUF4158) CSC00_5666 PF00565 Staphylococcal nuclease homologue CSC00_5668 PF00816 H-NS histone family CSC00_5673 PF10411 Disulfide bond isomerase protein N-terminus CSC00_5673 PF13098 Thioredoxin-like domain CSC00_5698 PF11799 impB/mucB/samB family C-terminal domain CSC00_5698 PF00817 impB/mucB/samB family CSC00_5698 PF13438 Domain of unknown function (DUF4113) CSC00_5699 PF00717 Peptidase S24-like CSC00_5700 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSC00_5702 PF12323 Helix-turn-helix domain CSC00_5702 PF07282 Putative transposase DNA-binding domain CSC00_5702 PF01385 Probable transposase CSC00_5705 PF13307 Helicase C-terminal domain CSC00_5726 PF01051 Initiator Replication protein CSC00_5730 PF01555 DNA methylase CSC00_5735 PF09019 EcoRII C terminal CSC00_5735 PF09217 Restriction endonuclease EcoRII, N-terminal CSC00_5736 PF00145 C-5 cytosine-specific DNA methylase CSC00_5736 PF18284 DNA methylase N-terminal domain CSC00_5737 PF01695 IstB-like ATP binding protein CSC00_5749 PF00817 impB/mucB/samB family CSC00_5749 PF11799 impB/mucB/samB family C-terminal domain CSC00_5749 PF13438 Domain of unknown function (DUF4113) CSC00_5750 PF11799 impB/mucB/samB family C-terminal domain CSC00_5750 PF00817 impB/mucB/samB family CSC00_5750 PF13438 Domain of unknown function (DUF4113) CSC00_5751 PF00717 Peptidase S24-like CSC00_5752 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CSC00_5754 PF02517 CPBP intramembrane metalloprotease CSC00_5760 PF02796 Helix-turn-helix domain of resolvase CSC00_5760 PF00239 Resolvase, N terminal domain CSC00_5761 PF13700 Domain of unknown function (DUF4158) CSC00_5761 PF01526 Tn3 transposase DDE domain CSC00_5762 PF01548 Transposase CSC00_5762 PF02371 Transposase IS116/IS110/IS902 family CSC00_5763 PF02387 IncFII RepA protein family CSC00_5771 PF13700 Domain of unknown function (DUF4158) CSC00_5771 PF01526 Tn3 transposase DDE domain CSC00_5772 PF02796 Helix-turn-helix domain of resolvase CSC00_5772 PF00239 Resolvase, N terminal domain CSC00_5775 PF13610 DDE domain CSC00_5782 PF08401 Domain of unknown function (DUF1738) CSC00_5782 PF18818 Metallopeptidase superfamily domain CSC00_5782 PF13362 Toprim domain CSC00_5787 PF03432 Relaxase/Mobilisation nuclease domain CSC00_5808 PF09383 NIL domain CSC00_5808 PF00005 ABC transporter CSC00_5809 PF02195 ParB-like nuclease domain CSC00_5809 PF17762 HTH domain found in ParB protein CSC00_5811 PF00270 DEAD/DEAH box helicase CSC00_5811 PF00271 Helicase conserved C-terminal domain CSC00_5811 PF17191 RecG wedge domain CSC00_5828 PF01121 Dephospho-CoA kinase CSC00_5831 PF00303 Thymidylate synthase CSC00_5843 PF01526 Tn3 transposase DDE domain CSC00_5843 PF13700 Domain of unknown function (DUF4158) CSC00_5844 PF01526 Tn3 transposase DDE domain CSC00_5844 PF13700 Domain of unknown function (DUF4158) CSC00_5845 PF02796 Helix-turn-helix domain of resolvase CSC00_5845 PF00239 Resolvase, N terminal domain CSC00_5848 PF13610 DDE domain CSC00_5852 PF02562 PhoH-like protein CSC00_5853 PF00462 Glutaredoxin CSC00_5858 PF06213 Cobalamin biosynthesis protein CobT CSC00_5858 PF11775 Cobalamin biosynthesis protein CobT VWA domain CSC00_5860 PF14579 Helix-hairpin-helix motif CSC00_5860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CSC00_5860 PF07733 Bacterial DNA polymerase III alpha NTPase domain CSC00_5860 PF02811 PHP domain CSC00_5865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CSC00_5865 PF01367 5'-3' exonuclease, C-terminal SAM fold CSC00_5867 PF00154 recA bacterial DNA recombination protein CSC00_5871 PF01051 Initiator Replication protein CSC00_5883 PF13091 PLD-like domain CSC00_5885 PF06406 StbA protein CSC00_5886 PF00589 Phage integrase family CSC00_5898 PF00436 Single-strand binding protein family CSC00_5901 PF03230 Antirestriction protein CSC00_5906 PF05321 Haemolysin expression modulating protein