locus-tag class description JT727_00005 PF11638 DnaA N-terminal domain JT727_00005 PF08299 Bacterial dnaA protein helix-turn-helix JT727_00005 PF00308 Bacterial dnaA protein JT727_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JT727_00010 PF02767 DNA polymerase III beta subunit, central domain JT727_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JT727_00015 PF02463 RecF/RecN/SMC N terminal domain JT727_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_00020 PF00204 DNA gyrase B JT727_00020 PF01751 Toprim domain JT727_00020 PF00986 DNA gyrase B subunit, carboxyl terminus JT727_00020 PF18053 DNA gyrase B subunit insert domain JT727_00040 PF07729 FCD domain JT727_00040 PF00392 Bacterial regulatory proteins, gntR family JT727_00045 PF05035 2-keto-3-deoxy-galactonokinase JT727_00050 PF01081 KDPG and KHG aldolase JT727_00055 PF13378 Enolase C-terminal domain-like JT727_00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT727_00060 PF07690 Major Facilitator Superfamily JT727_00065 PF12566 Protein of unknown function (DUF3748) JT727_00065 PF07676 WD40-like Beta Propeller Repeat JT727_00070 PF07119 Protein of unknown function (DUF1375) JT727_00075 PF00011 Hsp20/alpha crystallin family JT727_00080 PF00011 Hsp20/alpha crystallin family JT727_00090 PF02080 TrkA-C domain JT727_00090 PF06826 Predicted Permease Membrane Region JT727_00095 PF00392 Bacterial regulatory proteins, gntR family JT727_00095 PF07702 UTRA domain JT727_00100 PF02378 Phosphotransferase system, EIIC JT727_00100 PF00367 phosphotransferase system, EIIB JT727_00105 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT727_00105 PF02056 Family 4 glycosyl hydrolase JT727_00110 PF02656 Domain of unknown function (DUF202) JT727_00115 PF02656 Domain of unknown function (DUF202) JT727_00125 PF00291 Pyridoxal-phosphate dependent enzyme JT727_00130 PF02447 GntP family permease JT727_00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_00140 PF03466 LysR substrate binding domain JT727_00145 PF07690 Major Facilitator Superfamily JT727_00175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_00175 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_00175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_00180 PF01842 ACT domain JT727_00185 PF00196 Bacterial regulatory proteins, luxR family JT727_00185 PF00072 Response regulator receiver domain JT727_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_00190 PF07730 Histidine kinase JT727_00190 PF05231 MASE1 JT727_00195 PF07690 Major Facilitator Superfamily JT727_00200 PF07690 Major Facilitator Superfamily JT727_00205 PF06711 Protein of unknown function (DUF1198) JT727_00220 PF07690 Major Facilitator Superfamily JT727_00230 PF00266 Aminotransferase class-V JT727_00235 PF07702 UTRA domain JT727_00235 PF00392 Bacterial regulatory proteins, gntR family JT727_00240 PF01547 Bacterial extracellular solute-binding protein JT727_00245 PF00005 ABC transporter JT727_00245 PF08402 TOBE domain JT727_00250 PF00528 Binding-protein-dependent transport system inner membrane component JT727_00255 PF00528 Binding-protein-dependent transport system inner membrane component JT727_00260 PF02264 LamB porin JT727_00265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT727_00270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_00270 PF02378 Phosphotransferase system, EIIC JT727_00275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_00280 PF00356 Bacterial regulatory proteins, lacI family JT727_00285 PF07690 Major Facilitator Superfamily JT727_00290 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit JT727_00290 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT727_00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_00295 PF03466 LysR substrate binding domain JT727_00300 PF02585 GlcNAc-PI de-N-acetylase JT727_00305 PF03737 Aldolase/RraA JT727_00310 PF04303 PrpF protein JT727_00325 PF00892 EamA-like transporter family JT727_00330 PF00367 phosphotransferase system, EIIB JT727_00330 PF02378 Phosphotransferase system, EIIC JT727_00335 PF13580 SIS domain JT727_00340 PF07690 Major Facilitator Superfamily JT727_00345 PF02321 Outer membrane efflux protein JT727_00355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_00355 PF00529 HlyD membrane-fusion protein of T1SS JT727_00370 PF00583 Acetyltransferase (GNAT) family JT727_00375 PF00440 Bacterial regulatory proteins, tetR family JT727_00380 PF07690 Major Facilitator Superfamily JT727_00385 PF03466 LysR substrate binding domain JT727_00385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_00410 PF03180 NLPA lipoprotein JT727_00420 PF00293 NUDIX domain JT727_00425 PF12706 Beta-lactamase superfamily domain JT727_00430 PF01965 DJ-1/PfpI family JT727_00435 PF08240 Alcohol dehydrogenase GroES-like domain JT727_00435 PF00107 Zinc-binding dehydrogenase JT727_00450 PF08240 Alcohol dehydrogenase GroES-like domain JT727_00450 PF00107 Zinc-binding dehydrogenase JT727_00465 PF17345 Family of unknown function (DUF5375) JT727_00490 PF00665 Integrase core domain JT727_00495 PF01695 IstB-like ATP binding protein JT727_00505 PF04606 Ogr/Delta-like zinc finger JT727_00525 PF00589 Phage integrase family JT727_00525 PF14659 Phage integrase, N-terminal SAM-like domain JT727_00525 PF13356 Arm DNA-binding domain JT727_00540 PF01055 Glycosyl hydrolases family 31 JT727_00540 PF13802 Galactose mutarotase-like JT727_00550 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT727_00550 PF02056 Family 4 glycosyl hydrolase JT727_00555 PF02378 Phosphotransferase system, EIIC JT727_00555 PF00367 phosphotransferase system, EIIB JT727_00560 PF05170 AsmA family JT727_00565 PF00860 Permease family JT727_00570 PF03616 Sodium/glutamate symporter JT727_00575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_00575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_00580 PF00230 Major intrinsic protein JT727_00585 PF06005 Cell division protein ZapB JT727_00595 PF02611 CDP-diacylglycerol pyrophosphatase JT727_00605 PF00121 Triosephosphate isomerase JT727_00610 PF07305 Protein of unknown function (DUF1454) JT727_00615 PF05656 Protein of unknown function (DUF805) JT727_00620 PF00970 Oxidoreductase FAD-binding domain JT727_00620 PF00175 Oxidoreductase NAD-binding domain JT727_00625 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JT727_00630 PF00270 DEAD/DEAH box helicase JT727_00630 PF17191 RecG wedge domain JT727_00630 PF00271 Helicase conserved C-terminal domain JT727_00635 PF12105 SpoU, rRNA methylase, C-terminal JT727_00635 PF00588 SpoU rRNA Methylase family JT727_00640 PF02824 TGS domain JT727_00640 PF04607 Region found in RelA / SpoT proteins JT727_00640 PF13291 ACT domain JT727_00645 PF01192 RNA polymerase Rpb6 JT727_00650 PF00625 Guanylate kinase JT727_00655 PF03120 NAD-dependent DNA ligase OB-fold domain JT727_00655 PF01653 NAD-dependent DNA ligase adenylation domain JT727_00660 PF03458 UPF0126 domain JT727_00670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JT727_00670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JT727_00670 PF12833 Helix-turn-helix domain JT727_00670 PF02805 Metal binding domain of Ada JT727_00680 PF08340 Domain of unknown function (DUF1732) JT727_00680 PF03755 YicC-like family, N-terminal region JT727_00700 PF00005 ABC transporter JT727_00710 PF01138 3' exoribonuclease family, domain 1 JT727_00710 PF03725 3' exoribonuclease family, domain 2 JT727_00715 PF00156 Phosphoribosyl transferase domain JT727_00720 PF00440 Bacterial regulatory proteins, tetR family JT727_00725 PF00692 dUTPase JT727_00730 PF02441 Flavoprotein JT727_00730 PF04127 DNA / pantothenate metabolism flavoprotein JT727_00735 PF04002 RadC-like JAB domain JT727_00740 PF00830 Ribosomal L28 family JT727_00745 PF00471 Ribosomal protein L33 JT727_00750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JT727_00750 PF06827 Zinc finger found in FPG and IleRS JT727_00750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JT727_00755 PF01467 Cytidylyltransferase-like JT727_00760 PF00535 Glycosyl transferase family 2 JT727_00765 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JT727_00770 PF00535 Glycosyl transferase family 2 JT727_00775 PF00534 Glycosyl transferases group 1 JT727_00775 PF13439 Glycosyltransferase Family 4 JT727_00780 PF00534 Glycosyl transferases group 1 JT727_00780 PF13439 Glycosyltransferase Family 4 JT727_00785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT727_00800 PF04932 O-Antigen ligase JT727_00810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT727_00815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT727_00820 PF01370 NAD dependent epimerase/dehydratase family JT727_00825 PF00155 Aminotransferase class I and II JT727_00830 PF08240 Alcohol dehydrogenase GroES-like domain JT727_00830 PF00107 Zinc-binding dehydrogenase JT727_00835 PF00535 Glycosyl transferase family 2 JT727_00840 PF04748 Divergent polysaccharide deacetylase JT727_00845 PF01551 Peptidase family M23 JT727_00850 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JT727_00850 PF01676 Metalloenzyme superfamily JT727_00855 PF00581 Rhodanese-like domain JT727_00860 PF00462 Glutaredoxin JT727_00865 PF02556 Preprotein translocase subunit SecB JT727_00870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JT727_00870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JT727_00875 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_00875 PF06426 Serine acetyltransferase, N-terminal JT727_00880 PF00588 SpoU rRNA Methylase family JT727_00885 PF01070 FMN-dependent dehydrogenase JT727_00890 PF00392 Bacterial regulatory proteins, gntR family JT727_00890 PF07729 FCD domain JT727_00895 PF02652 L-lactate permease JT727_00900 PF10928 Protein of unknown function (DUF2810) JT727_00910 PF05068 Mannitol repressor JT727_00915 PF01232 Mannitol dehydrogenase Rossmann domain JT727_00915 PF08125 Mannitol dehydrogenase C-terminal domain JT727_00920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_00920 PF02378 Phosphotransferase system, EIIC JT727_00920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_00925 PF00043 Glutathione S-transferase, C-terminal domain JT727_00925 PF13417 Glutathione S-transferase, N-terminal domain JT727_00930 PF03841 L-seryl-tRNA selenium transferase JT727_00930 PF12390 Selenocysteine synthase N terminal JT727_00935 PF09106 Elongation factor SelB, winged helix JT727_00935 PF00009 Elongation factor Tu GTP binding domain JT727_00935 PF03144 Elongation factor Tu domain 2 JT727_00935 PF09107 Elongation factor SelB, winged helix JT727_00940 PF09339 IclR helix-turn-helix domain JT727_00940 PF01614 Bacterial transcriptional regulator JT727_00945 PF12800 4Fe-4S binding domain JT727_00945 PF13247 4Fe-4S dicluster domain JT727_00950 PF00155 Aminotransferase class I and II JT727_00955 PF00128 Alpha amylase, catalytic domain JT727_00960 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JT727_00965 PF12833 Helix-turn-helix domain JT727_00970 PF02653 Branched-chain amino acid transport system / permease component JT727_00975 PF00005 ABC transporter JT727_00980 PF13407 Periplasmic binding protein domain JT727_00990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_00990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_00995 PF05360 yiaA/B two helix domain JT727_01000 PF05360 yiaA/B two helix domain JT727_01005 PF01757 Acyltransferase family JT727_01010 PF13983 YsaB-like lipoprotein JT727_01015 PF02091 Glycyl-tRNA synthetase alpha subunit JT727_01020 PF02092 Glycyl-tRNA synthetase beta subunit JT727_01020 PF05746 DALR anticodon binding domain JT727_01025 PF01848 Hok/gef family JT727_01030 PF12848 ABC transporter JT727_01030 PF00005 ABC transporter JT727_01035 PF00313 'Cold-shock' DNA-binding domain JT727_01040 PF01381 Helix-turn-helix JT727_01045 PF07690 Major Facilitator Superfamily JT727_01050 PF11254 Protein of unknown function (DUF3053) JT727_01055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT727_01055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT727_01060 PF07690 Major Facilitator Superfamily JT727_01065 PF00294 pfkB family carbohydrate kinase JT727_01075 PF00356 Bacterial regulatory proteins, lacI family JT727_01080 PF13488 Glycine zipper JT727_01080 PF00691 OmpA family JT727_01085 PF18364 Molybdopterin oxidoreductase N-terminal domain JT727_01085 PF00384 Molybdopterin oxidoreductase JT727_01085 PF01568 Molydopterin dinucleotide binding domain JT727_01090 PF00583 Acetyltransferase (GNAT) family JT727_01095 PF03352 Methyladenine glycosylase JT727_01100 PF03797 Autotransporter beta-domain JT727_01105 PF07690 Major Facilitator Superfamily JT727_01110 PF00884 Sulfatase JT727_01110 PF08019 Phosphoethanolamine transferase EptA/EptB JT727_01135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_01140 PF00528 Binding-protein-dependent transport system inner membrane component JT727_01145 PF00528 Binding-protein-dependent transport system inner membrane component JT727_01145 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_01150 PF00005 ABC transporter JT727_01150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_01155 PF00005 ABC transporter JT727_01155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_01170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JT727_01175 PF07238 PilZ domain JT727_01175 PF03170 Bacterial cellulose synthase subunit JT727_01175 PF03552 Cellulose synthase JT727_01175 PF00535 Glycosyl transferase family 2 JT727_01180 PF03170 Bacterial cellulose synthase subunit JT727_01185 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JT727_01195 PF01270 Glycosyl hydrolases family 8 JT727_01200 PF11658 Cellulose biosynthesis protein BcsG JT727_01205 PF11120 Cellulose biosynthesis protein BcsF JT727_01210 PF10995 Cellulose biosynthesis GIL JT727_01215 PF10945 Cellulose biosynthesis protein BcsR JT727_01220 PF06564 Cellulose biosynthesis protein BcsQ JT727_01225 PF07238 PilZ domain JT727_01225 PF00535 Glycosyl transferase family 2 JT727_01230 PF03170 Bacterial cellulose synthase subunit JT727_01235 PF01270 Glycosyl hydrolases family 8 JT727_01240 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JT727_01245 PF17154 Gammaproteobacterial periplasmic sensor domain JT727_01245 PF00990 Diguanylate cyclase, GGDEF domain JT727_01245 PF00672 HAMP domain JT727_01245 PF00563 EAL domain JT727_01250 PF00375 Sodium:dicarboxylate symporter family JT727_01255 PF00675 Insulinase (Peptidase family M16) JT727_01255 PF05193 Peptidase M16 inactive domain JT727_01260 PF00294 pfkB family carbohydrate kinase JT727_01265 PF05170 AsmA family JT727_01270 PF07690 Major Facilitator Superfamily JT727_01270 PF00083 Sugar (and other) transporter JT727_01275 PF03631 Virulence factor BrkB JT727_01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_01280 PF03466 LysR substrate binding domain JT727_01290 PF13302 Acetyltransferase (GNAT) domain JT727_01295 PF01204 Trehalase JT727_01300 PF00465 Iron-containing alcohol dehydrogenase JT727_01310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JT727_01310 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_01315 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JT727_01320 PF01569 PAP2 superfamily JT727_01325 PF01432 Peptidase family M3 JT727_01330 PF04445 Putative SAM-dependent methyltransferase JT727_01335 PF00854 POT family JT727_01340 PF00582 Universal stress protein family JT727_01345 PF10625 Universal stress protein B (UspB) JT727_01350 PF01384 Phosphate transporter family JT727_01360 PF00571 CBS domain JT727_01360 PF03448 MgtE intracellular N domain JT727_01360 PF01769 Divalent cation transporter JT727_01370 PF01402 Ribbon-helix-helix protein, copG family JT727_01370 PF08753 NikR C terminal nickel binding domain JT727_01375 PF00005 ABC transporter JT727_01380 PF00005 ABC transporter JT727_01385 PF00528 Binding-protein-dependent transport system inner membrane component JT727_01390 PF00528 Binding-protein-dependent transport system inner membrane component JT727_01395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_01400 PF03466 LysR substrate binding domain JT727_01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_01405 PF05870 Phenolic acid decarboxylase (PAD) JT727_01410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JT727_01415 PF00535 Glycosyl transferase family 2 JT727_01420 PF01370 NAD dependent epimerase/dehydratase family JT727_01420 PF00551 Formyl transferase JT727_01420 PF02911 Formyl transferase, C-terminal domain JT727_01425 PF01522 Polysaccharide deacetylase JT727_01430 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JT727_01435 PF00892 EamA-like transporter family JT727_01445 PF01594 AI-2E family transporter JT727_01450 PF07690 Major Facilitator Superfamily JT727_01455 PF08786 DcrB JT727_01460 PF02592 Putative vitamin uptake transporter JT727_01465 PF01206 Sulfurtransferase TusA JT727_01470 PF00403 Heavy-metal-associated domain JT727_01475 PF07947 YhhN family JT727_01480 PF10694 Protein of unknown function (DUF2500) JT727_01485 PF06611 Protein of unknown function (DUF1145) JT727_01495 PF02881 SRP54-type protein, helical bundle domain JT727_01495 PF00448 SRP54-type protein, GTPase domain JT727_01500 PF00005 ABC transporter JT727_01505 PF18075 FtsX extracellular domain JT727_01505 PF02687 FtsX-like permease family JT727_01510 PF04542 Sigma-70 region 2 JT727_01510 PF04545 Sigma-70, region 4 JT727_01515 PF00155 Aminotransferase class I and II JT727_01515 PF00392 Bacterial regulatory proteins, gntR family JT727_01520 PF00202 Aminotransferase class-III JT727_01530 PF13458 Periplasmic binding protein JT727_01535 PF12568 Acetyltransferase (GNAT) domain, PanZ JT727_01540 PF13458 Periplasmic binding protein JT727_01545 PF02653 Branched-chain amino acid transport system / permease component JT727_01550 PF11862 Domain of unknown function (DUF3382) JT727_01550 PF02653 Branched-chain amino acid transport system / permease component JT727_01555 PF00005 ABC transporter JT727_01555 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT727_01560 PF00005 ABC transporter JT727_01565 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JT727_01575 PF13416 Bacterial extracellular solute-binding protein JT727_01580 PF00528 Binding-protein-dependent transport system inner membrane component JT727_01585 PF00528 Binding-protein-dependent transport system inner membrane component JT727_01590 PF00005 ABC transporter JT727_01590 PF17912 MalK OB fold domain JT727_01595 PF03009 Glycerophosphoryl diester phosphodiesterase family JT727_01600 PF10956 Protein of unknown function (DUF2756) JT727_01610 PF00583 Acetyltransferase (GNAT) family JT727_01620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_01620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_01625 PF02678 Pirin JT727_01625 PF17954 Quercetinase C-terminal cupin domain JT727_01630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT727_01630 PF00356 Bacterial regulatory proteins, lacI family JT727_01635 PF01202 Shikimate kinase JT727_01640 PF02447 GntP family permease JT727_01650 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT727_01650 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT727_01655 PF02806 Alpha amylase, C-terminal all-beta domain JT727_01655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT727_01655 PF00128 Alpha amylase, catalytic domain JT727_01660 PF00128 Alpha amylase, catalytic domain JT727_01660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT727_01660 PF18390 Glycogen debranching enzyme C-terminal domain JT727_01665 PF00483 Nucleotidyl transferase JT727_01670 PF00534 Glycosyl transferases group 1 JT727_01670 PF08323 Starch synthase catalytic domain JT727_01675 PF00343 Carbohydrate phosphorylase JT727_01680 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JT727_01680 PF01266 FAD dependent oxidoreductase JT727_01685 PF00581 Rhodanese-like domain JT727_01690 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JT727_01690 PF01694 Rhomboid family JT727_01695 PF00455 DeoR C terminal sensor domain JT727_01695 PF08220 DeoR-like helix-turn-helix domain JT727_01700 PF17874 MalT-like TPR region JT727_01700 PF00196 Bacterial regulatory proteins, luxR family JT727_01705 PF00343 Carbohydrate phosphorylase JT727_01710 PF02446 4-alpha-glucanotransferase JT727_01715 PF02447 GntP family permease JT727_01720 PF01106 NifU-like domain JT727_01720 PF01521 Iron-sulphur cluster biosynthesis JT727_01725 PF00156 Phosphoribosyl transferase domain JT727_01730 PF00561 alpha/beta hydrolase fold JT727_01740 PF09012 FeoC like transcriptional regulator JT727_01745 PF07664 Ferrous iron transport protein B C terminus JT727_01745 PF17910 FeoB cytosolic helical domain JT727_01745 PF02421 Ferrous iron transport protein B JT727_01745 PF07670 Nucleoside recognition JT727_01750 PF04023 FeoA domain JT727_01755 PF16921 Tex protein YqgF-like domain JT727_01755 PF00575 S1 RNA binding domain JT727_01755 PF17674 HHH domain JT727_01755 PF09371 Tex-like protein N-terminal domain JT727_01760 PF01272 Transcription elongation factor, GreA/GreB, C-term JT727_01760 PF03449 Transcription elongation factor, N-terminal JT727_01765 PF00486 Transcriptional regulatory protein, C terminal JT727_01765 PF00072 Response regulator receiver domain JT727_01770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_01770 PF00672 HAMP domain JT727_01770 PF00512 His Kinase A (phospho-acceptor) domain JT727_01775 PF01293 Phosphoenolpyruvate carboxykinase JT727_01780 PF01430 Hsp33 protein JT727_01785 PF01479 S4 domain JT727_01790 PF13419 Haloacid dehalogenase-like hydrolase JT727_01795 PF07095 Intracellular growth attenuator protein IgaA JT727_01800 PF00293 NUDIX domain JT727_01805 PF00905 Penicillin binding protein transpeptidase domain JT727_01805 PF00912 Transglycosylase JT727_01805 PF17092 Penicillin-binding protein OB-like domain JT727_01830 PF03958 Bacterial type II/III secretion system short domain JT727_01830 PF00263 Bacterial type II and III secretion system protein JT727_01835 PF01202 Shikimate kinase JT727_01840 PF01761 3-dehydroquinate synthase JT727_01845 PF05036 Sporulation related domain JT727_01850 PF02086 D12 class N6 adenine-specific DNA methyltransferase JT727_01855 PF00834 Ribulose-phosphate 3 epimerase family JT727_01860 PF13419 Haloacid dehalogenase-like hydrolase JT727_01865 PF00579 tRNA synthetases class I (W and Y) JT727_01870 PF10414 Sirohaem synthase dimerisation region JT727_01870 PF14824 Sirohaem biosynthesis protein central JT727_01870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT727_01875 PF13806 Rieske-like [2Fe-2S] domain JT727_01880 PF04324 BFD-like [2Fe-2S] binding domain JT727_01880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JT727_01880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JT727_01880 PF18267 Rubredoxin NAD+ reductase C-terminal domain JT727_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_01885 PF07969 Amidohydrolase family JT727_01890 PF07690 Major Facilitator Superfamily JT727_01895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JT727_01900 PF10832 Protein of unknown function (DUF2559) JT727_01905 PF02661 Fic/DOC family JT727_01910 PF00117 Glutamine amidotransferase class-I JT727_01915 PF00202 Aminotransferase class-III JT727_01920 PF12805 FUSC-like inner membrane protein yccS JT727_01925 PF00027 Cyclic nucleotide-binding domain JT727_01925 PF13545 Crp-like helix-turn-helix domain JT727_01930 PF02566 OsmC-like protein JT727_01935 PF00485 Phosphoribulokinase / Uridine kinase family JT727_01940 PF06794 Uncharacterised protein family (UPF0270) JT727_01945 PF00561 alpha/beta hydrolase fold JT727_01950 PF00005 ABC transporter JT727_01950 PF12848 ABC transporter JT727_01955 PF02525 Flavodoxin-like fold JT727_01960 PF02254 TrkA-N domain JT727_01960 PF00999 Sodium/hydrogen exchanger family JT727_01965 PF09526 Probable metal-binding protein (DUF2387) JT727_01970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT727_01975 PF04102 SlyX JT727_01980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT727_01980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JT727_01985 PF13309 HTH domain JT727_01985 PF08348 YheO-like PAS domain JT727_01990 PF02635 DsrE/DsrF-like family JT727_01995 PF02635 DsrE/DsrF-like family JT727_02000 PF04077 DsrH like protein JT727_02005 PF00164 Ribosomal protein S12/S23 JT727_02010 PF00177 Ribosomal protein S7p/S5e JT727_02015 PF03144 Elongation factor Tu domain 2 JT727_02015 PF00679 Elongation factor G C-terminus JT727_02015 PF14492 Elongation Factor G, domain II JT727_02015 PF03764 Elongation factor G, domain IV JT727_02015 PF00009 Elongation factor Tu GTP binding domain JT727_02020 PF00009 Elongation factor Tu GTP binding domain JT727_02020 PF03143 Elongation factor Tu C-terminal domain JT727_02020 PF03144 Elongation factor Tu domain 2 JT727_02025 PF04324 BFD-like [2Fe-2S] binding domain JT727_02030 PF00210 Ferritin-like domain JT727_02035 PF01478 Type IV leader peptidase family JT727_02040 PF00338 Ribosomal protein S10p/S20e JT727_02045 PF00297 Ribosomal protein L3 JT727_02050 PF00573 Ribosomal protein L4/L1 family JT727_02055 PF00276 Ribosomal protein L23 JT727_02060 PF00181 Ribosomal Proteins L2, RNA binding domain JT727_02060 PF03947 Ribosomal Proteins L2, C-terminal domain JT727_02065 PF00203 Ribosomal protein S19 JT727_02070 PF00237 Ribosomal protein L22p/L17e JT727_02075 PF07650 KH domain JT727_02075 PF00189 Ribosomal protein S3, C-terminal domain JT727_02080 PF00252 Ribosomal protein L16p/L10e JT727_02085 PF00831 Ribosomal L29 protein JT727_02090 PF00366 Ribosomal protein S17 JT727_02095 PF00238 Ribosomal protein L14p/L23e JT727_02100 PF00467 KOW motif JT727_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JT727_02105 PF00673 ribosomal L5P family C-terminus JT727_02105 PF00281 Ribosomal protein L5 JT727_02110 PF00253 Ribosomal protein S14p/S29e JT727_02115 PF00410 Ribosomal protein S8 JT727_02120 PF00347 Ribosomal protein L6 JT727_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JT727_02130 PF00333 Ribosomal protein S5, N-terminal domain JT727_02130 PF03719 Ribosomal protein S5, C-terminal domain JT727_02135 PF00327 Ribosomal protein L30p/L7e JT727_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JT727_02145 PF00344 SecY translocase JT727_02150 PF00444 Ribosomal protein L36 JT727_02155 PF00416 Ribosomal protein S13/S18 JT727_02160 PF00411 Ribosomal protein S11 JT727_02165 PF01479 S4 domain JT727_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain JT727_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JT727_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JT727_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain JT727_02175 PF01196 Ribosomal protein L17 JT727_02180 PF09350 Domain of unknown function (DUF1992) JT727_02185 PF13411 MerR HTH family regulatory protein JT727_02190 PF03889 Alternative ribosome-rescue factor A JT727_02195 PF01741 Large-conductance mechanosensitive channel, MscL JT727_02200 PF02080 TrkA-C domain JT727_02200 PF02254 TrkA-N domain JT727_02205 PF01029 NusB family JT727_02205 PF01189 16S rRNA methyltransferase RsmB/F JT727_02210 PF00551 Formyl transferase JT727_02210 PF02911 Formyl transferase, C-terminal domain JT727_02215 PF01327 Polypeptide deformylase JT727_02220 PF02481 DNA recombination-mediator protein A JT727_02220 PF17782 DprA winged helix domain JT727_02225 PF04361 Protein of unknown function (DUF494) JT727_02230 PF01396 Topoisomerase DNA binding C4 zinc finger JT727_02235 PF01300 Telomere recombination JT727_02240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT727_02240 PF08501 Shikimate dehydrogenase substrate binding domain JT727_02240 PF01488 Shikimate / quinate 5-dehydrogenase JT727_02245 PF07369 Protein of unknown function (DUF1488) JT727_02250 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_02285 PF00873 AcrB/AcrD/AcrF family JT727_02290 PF00529 HlyD membrane-fusion protein of T1SS JT727_02290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_02295 PF08361 MAATS-type transcriptional repressor, C-terminal region JT727_02295 PF00440 Bacterial regulatory proteins, tetR family JT727_02300 PF02954 Bacterial regulatory protein, Fis family JT727_02305 PF01207 Dihydrouridine synthase (Dus) JT727_02315 PF00474 Sodium:solute symporter family JT727_02320 PF06196 Protein of unknown function (DUF997) JT727_02325 PF00289 Biotin carboxylase, N-terminal domain JT727_02325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JT727_02325 PF02785 Biotin carboxylase C-terminal domain JT727_02330 PF00364 Biotin-requiring enzyme JT727_02335 PF01220 Dehydroquinase class II JT727_02340 PF01794 Ferric reductase like transmembrane component JT727_02345 PF00174 Oxidoreductase molybdopterin binding domain JT727_02355 PF17157 Gammaproteobacterial periplasmic sensor domain JT727_02355 PF00563 EAL domain JT727_02355 PF00990 Diguanylate cyclase, GGDEF domain JT727_02365 PF04085 rod shape-determining protein MreC JT727_02370 PF04093 rod shape-determining protein MreD JT727_02375 PF02545 Maf-like protein JT727_02380 PF10150 Ribonuclease E/G family JT727_02380 PF00575 S1 RNA binding domain JT727_02385 PF13116 Protein of unknown function JT727_02385 PF13502 AsmA-like C-terminal region JT727_02390 PF01523 Putative modulator of DNA gyrase JT727_02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_02395 PF03466 LysR substrate binding domain JT727_02400 PF07869 Protein of unknown function (DUF1656) JT727_02405 PF13533 Biotin-lipoyl like JT727_02410 PF04632 Fusaric acid resistance protein family JT727_02415 PF01337 Barstar (barnase inhibitor) JT727_02420 PF07338 Protein of unknown function (DUF1471) JT727_02425 PF07338 Protein of unknown function (DUF1471) JT727_02430 PF01316 Arginine repressor, DNA binding domain JT727_02430 PF02863 Arginine repressor, C-terminal domain JT727_02435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JT727_02435 PF00056 lactate/malate dehydrogenase, NAD binding domain JT727_02440 PF13180 PDZ domain JT727_02445 PF00595 PDZ domain JT727_02445 PF13180 PDZ domain JT727_02450 PF06295 Protein of unknown function (DUF1043) JT727_02455 PF03969 AFG1-like ATPase JT727_02460 PF00572 Ribosomal protein L13 JT727_02465 PF00380 Ribosomal protein S9/S16 JT727_02475 PF00043 Glutathione S-transferase, C-terminal domain JT727_02475 PF02798 Glutathione S-transferase, N-terminal domain JT727_02480 PF04386 Stringent starvation protein B JT727_02485 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JT727_02490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JT727_02490 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_02495 PF00310 Glutamine amidotransferases class-II JT727_02495 PF04898 Glutamate synthase central domain JT727_02495 PF01645 Conserved region in glutamate synthase JT727_02495 PF01493 GXGXG motif JT727_02500 PF04055 Radical SAM superfamily JT727_02500 PF16199 Radical_SAM C-terminal domain JT727_02505 PF07690 Major Facilitator Superfamily JT727_02510 PF00107 Zinc-binding dehydrogenase JT727_02510 PF08240 Alcohol dehydrogenase GroES-like domain JT727_02515 PF03786 D-mannonate dehydratase (UxuA) JT727_02520 PF00072 Response regulator receiver domain JT727_02520 PF00989 PAS fold JT727_02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_02520 PF01627 Hpt domain JT727_02520 PF00512 His Kinase A (phospho-acceptor) domain JT727_02520 PF18415 Histidine kinase receptor ArcB trans-membrane domain JT727_02530 PF00912 Transglycosylase JT727_02535 PF00381 PTS HPr component phosphorylation site JT727_02540 PF03668 P-loop ATPase protein family JT727_02545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_02550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JT727_02555 PF00309 Sigma-54 factor, Activator interacting domain (AID) JT727_02555 PF04963 Sigma-54 factor, core binding domain JT727_02555 PF04552 Sigma-54, DNA binding domain JT727_02560 PF00005 ABC transporter JT727_02560 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT727_02565 PF03968 OstA-like protein JT727_02570 PF06835 Lipopolysaccharide-assembly, LptC-related JT727_02580 PF00571 CBS domain JT727_02580 PF01380 SIS domain JT727_02585 PF01699 Sodium/calcium exchanger protein JT727_02590 PF00005 ABC transporter JT727_02595 PF02405 Permease MlaE JT727_02600 PF02470 MlaD protein JT727_02605 PF05494 MlaC protein JT727_02610 PF13466 STAS domain JT727_02615 PF01722 BolA-like protein JT727_02620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JT727_02625 PF13693 Winged helix-turn-helix DNA-binding JT727_02630 PF00348 Polyprenyl synthetase JT727_02635 PF00829 Ribosomal prokaryotic L21 protein JT727_02640 PF01016 Ribosomal L27 protein JT727_02645 PF00892 EamA-like transporter family JT727_02650 PF01926 50S ribosome-binding GTPase JT727_02650 PF01018 GTP1/OBG JT727_02655 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JT727_02660 PF01272 Transcription elongation factor, GreA/GreB, C-term JT727_02660 PF03449 Transcription elongation factor, N-terminal JT727_02665 PF01985 CRS1 / YhbY (CRM) domain JT727_02670 PF01728 FtsJ-like methyltransferase JT727_02675 PF06480 FtsH Extracellular JT727_02675 PF01434 Peptidase family M41 JT727_02675 PF00004 ATPase family associated with various cellular activities (AAA) JT727_02675 PF17862 AAA+ lid domain JT727_02680 PF00809 Pterin binding enzyme JT727_02685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JT727_02685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JT727_02685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JT727_02685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JT727_02690 PF03840 Preprotein translocase SecG subunit JT727_02705 PF07437 YfaZ precursor JT727_02710 PF15977 Winged helix-turn-helix DNA binding JT727_02715 PF00764 Arginosuccinate synthase JT727_02725 PF17384 RimP C-terminal SH3 domain JT727_02725 PF02576 RimP N-terminal domain JT727_02730 PF13184 NusA-like KH domain JT727_02730 PF08529 NusA N-terminal domain JT727_02730 PF00575 S1 RNA binding domain JT727_02735 PF00009 Elongation factor Tu GTP binding domain JT727_02735 PF04760 Translation initiation factor IF-2, N-terminal region JT727_02735 PF08364 Bacterial translation initiation factor IF-2 associated region JT727_02735 PF11987 Translation-initiation factor 2 JT727_02740 PF02033 Ribosome-binding factor A JT727_02745 PF09157 Pseudouridine synthase II TruB, C-terminal JT727_02745 PF01509 TruB family pseudouridylate synthase (N terminal domain) JT727_02745 PF16198 tRNA pseudouridylate synthase B C-terminal domain JT727_02750 PF00312 Ribosomal protein S15 JT727_02755 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JT727_02755 PF00013 KH domain JT727_02755 PF01138 3' exoribonuclease family, domain 1 JT727_02755 PF03725 3' exoribonuclease family, domain 2 JT727_02755 PF00575 S1 RNA binding domain JT727_02760 PF07719 Tetratricopeptide repeat JT727_02760 PF13181 Tetratricopeptide repeat JT727_02770 PF12343 Cold shock protein DEAD box A JT727_02770 PF00270 DEAD/DEAH box helicase JT727_02770 PF03880 DbpA RNA binding domain JT727_02770 PF00271 Helicase conserved C-terminal domain JT727_02775 PF03222 Tryptophan/tyrosine permease family JT727_02780 PF00296 Luciferase-like monooxygenase JT727_02785 PF01136 Peptidase family U32 JT727_02790 PF01136 Peptidase family U32 JT727_02795 PF02036 SCP-2 sterol transfer family JT727_02800 PF13508 Acetyltransferase (GNAT) domain JT727_02805 PF01541 GIY-YIG catalytic domain JT727_02815 PF01965 DJ-1/PfpI family JT727_02820 PF13460 NAD(P)H-binding JT727_02825 PF03773 Predicted permease JT727_02830 PF04972 BON domain JT727_02835 PF13580 SIS domain JT727_02840 PF02021 Uncharacterised protein family UPF0102 JT727_02845 PF04348 LppC putative lipoprotein JT727_02850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT727_02855 PF08666 SAF domain JT727_02855 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JT727_02860 PF07690 Major Facilitator Superfamily JT727_02865 PF03328 HpcH/HpaI aldolase/citrate lyase family JT727_02870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT727_02870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT727_02875 PF02595 Glycerate kinase family JT727_02900 PF02678 Pirin JT727_02900 PF17954 Quercetinase C-terminal cupin domain JT727_02905 PF03466 LysR substrate binding domain JT727_02905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_02910 PF05656 Protein of unknown function (DUF805) JT727_02915 PF13409 Glutathione S-transferase, N-terminal domain JT727_02920 PF07681 DoxX JT727_02925 PF13997 YqjK-like protein JT727_02930 PF07332 Putative Actinobacterial Holin-X, holin superfamily III JT727_02935 PF05957 Bacterial protein of unknown function (DUF883) JT727_02940 PF06476 Protein of unknown function (DUF1090) JT727_02945 PF13721 SecD export protein N-terminal TM region JT727_02950 PF09335 SNARE associated Golgi protein JT727_02955 PF00392 Bacterial regulatory proteins, gntR family JT727_02955 PF07729 FCD domain JT727_02960 PF07690 Major Facilitator Superfamily JT727_02965 PF02614 Glucuronate isomerase JT727_02970 PF08666 SAF domain JT727_02970 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JT727_02975 PF10688 Bacterial inner membrane protein JT727_02980 PF00375 Sodium:dicarboxylate symporter family JT727_02985 PF03741 Integral membrane protein TerC family JT727_02990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_02995 PF01863 Protein of unknown function DUF45 JT727_03010 PF05175 Methyltransferase small domain JT727_03015 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_03015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT727_03020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_03020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_03025 PF04198 Putative sugar-binding domain JT727_03030 PF00005 ABC transporter JT727_03035 PF02653 Branched-chain amino acid transport system / permease component JT727_03040 PF02653 Branched-chain amino acid transport system / permease component JT727_03045 PF13407 Periplasmic binding protein domain JT727_03050 PF01791 DeoC/LacD family aldolase JT727_03055 PF03992 Antibiotic biosynthesis monooxygenase JT727_03060 PF00202 Aminotransferase class-III JT727_03065 PF03551 Transcriptional regulator PadR-like family JT727_03070 PF04954 Siderophore-interacting protein JT727_03070 PF08021 Siderophore-interacting FAD-binding domain JT727_03075 PF02733 Dak1 domain JT727_03075 PF02734 DAK2 domain JT727_03080 PF00391 PEP-utilising enzyme, mobile domain JT727_03080 PF00381 PTS HPr component phosphorylation site JT727_03080 PF05524 PEP-utilising enzyme, N-terminal JT727_03080 PF03610 PTS system fructose IIA component JT727_03085 PF02734 DAK2 domain JT727_03090 PF02733 Dak1 domain JT727_03100 PF00465 Iron-containing alcohol dehydrogenase JT727_03105 PF02954 Bacterial regulatory protein, Fis family JT727_03105 PF00989 PAS fold JT727_03105 PF00158 Sigma-54 interaction domain JT727_03110 PF01923 Cobalamin adenosyltransferase JT727_03115 PF02288 Dehydratase medium subunit JT727_03120 PF00465 Iron-containing alcohol dehydrogenase JT727_03125 PF03928 Haem-degrading JT727_03130 PF02286 Dehydratase large subunit JT727_03135 PF02288 Dehydratase medium subunit JT727_03140 PF02287 Dehydratase small subunit JT727_03145 PF18427 DD-reactivating factor swiveling domain JT727_03145 PF08841 Diol dehydratase reactivase ATPase-like domain JT727_03150 PF00230 Major intrinsic protein JT727_03155 PF06411 HdeA/HdeB family JT727_03160 PF03729 Short repeat of unknown function (DUF308) JT727_03165 PF10938 YfdX protein JT727_03170 PF01627 Hpt domain JT727_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_03170 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_03170 PF00072 Response regulator receiver domain JT727_03170 PF00512 His Kinase A (phospho-acceptor) domain JT727_03175 PF00072 Response regulator receiver domain JT727_03175 PF00196 Bacterial regulatory proteins, luxR family JT727_03205 PF00486 Transcriptional regulatory protein, C terminal JT727_03205 PF00072 Response regulator receiver domain JT727_03215 PF00419 Fimbrial protein JT727_03220 PF00419 Fimbrial protein JT727_03225 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_03225 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_03230 PF00577 Outer membrane usher protein JT727_03230 PF13953 PapC C-terminal domain JT727_03230 PF13954 PapC N-terminal domain JT727_03235 PF00419 Fimbrial protein JT727_03245 PF09160 FimH, mannose binding JT727_03245 PF00419 Fimbrial protein JT727_03250 PF12792 CSS motif domain associated with EAL JT727_03250 PF00563 EAL domain JT727_03260 PF03167 Uracil DNA glycosylase superfamily JT727_03265 PF04539 Sigma-70 region 3 JT727_03265 PF04545 Sigma-70, region 4 JT727_03265 PF00140 Sigma-70 factor, region 1.2 JT727_03265 PF03979 Sigma-70 factor, region 1.1 JT727_03265 PF04546 Sigma-70, non-essential region JT727_03265 PF04542 Sigma-70 region 2 JT727_03270 PF10410 DnaB-helicase binding domain of primase JT727_03270 PF08278 DNA primase DnaG DnaB-binding JT727_03270 PF08275 DNA primase catalytic core, N-terminal domain JT727_03270 PF01807 CHC2 zinc finger JT727_03275 PF01165 Ribosomal protein S21 JT727_03280 PF00814 Glycoprotease family JT727_03290 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT727_03295 PF01730 UreF JT727_03300 PF05194 UreE urease accessory protein, C-terminal domain JT727_03300 PF02814 UreE urease accessory protein, N-terminal domain JT727_03305 PF00449 Urease alpha-subunit, N-terminal domain JT727_03305 PF01979 Amidohydrolase family JT727_03310 PF00699 Urease beta subunit JT727_03315 PF00547 Urease, gamma subunit JT727_03320 PF01774 UreD urease accessory protein JT727_03335 PF02660 Glycerol-3-phosphate acyltransferase JT727_03340 PF02152 Dihydroneopterin aldolase JT727_03345 PF02673 Bacitracin resistance protein BacA JT727_03350 PF01743 Poly A polymerase head domain JT727_03350 PF01966 HD domain JT727_03350 PF12627 Probable RNA and SrmB- binding site of polymerase A JT727_03355 PF08239 Bacterial SH3 domain JT727_03360 PF01928 CYTH domain JT727_03365 PF08335 GlnD PII-uridylyltransferase JT727_03365 PF03710 Glutamate-ammonia ligase adenylyltransferase JT727_03370 PF00294 pfkB family carbohydrate kinase JT727_03370 PF01467 Cytidylyltransferase-like JT727_03380 PF08971 Glycogen synthesis protein JT727_03385 PF04380 Membrane fusogenic activity JT727_03390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JT727_03395 PF02535 ZIP Zinc transporter JT727_03400 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT727_03405 PF03738 Glutathionylspermidine synthase preATP-grasp JT727_03410 PF06693 Protein of unknown function (DUF1190) JT727_03415 PF02321 Outer membrane efflux protein JT727_03420 PF00293 NUDIX domain JT727_03425 PF06853 Protein of unknown function (DUF1249) JT727_03430 PF00149 Calcineurin-like phosphoesterase JT727_03435 PF05728 Uncharacterised protein family (UPF0227) JT727_03440 PF01751 Toprim domain JT727_03440 PF00204 DNA gyrase B JT727_03440 PF00986 DNA gyrase B subunit, carboxyl terminus JT727_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_03445 PF03992 Antibiotic biosynthesis monooxygenase JT727_03450 PF02525 Flavodoxin-like fold JT727_03455 PF00512 His Kinase A (phospho-acceptor) domain JT727_03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_03455 PF08521 Two-component sensor kinase N-terminal JT727_03460 PF00072 Response regulator receiver domain JT727_03460 PF00486 Transcriptional regulatory protein, C terminal JT727_03465 PF04076 Bacterial OB fold (BOF) protein JT727_03470 PF06445 GyrI-like small molecule binding domain JT727_03475 PF00521 DNA gyrase/topoisomerase IV, subunit A JT727_03475 PF03989 DNA gyrase C-terminal domain, beta-propeller JT727_03480 PF01553 Acyltransferase JT727_03485 PF07732 Multicopper oxidase JT727_03485 PF00394 Multicopper oxidase JT727_03485 PF07731 Multicopper oxidase JT727_03490 PF04055 Radical SAM superfamily JT727_03490 PF08497 Radical SAM N-terminal JT727_03490 PF11842 Domain of unknown function (DUF3362) JT727_03500 PF00248 Aldo/keto reductase family JT727_03505 PF00465 Iron-containing alcohol dehydrogenase JT727_03510 PF06719 AraC-type transcriptional regulator N-terminus JT727_03510 PF12833 Helix-turn-helix domain JT727_03515 PF09335 SNARE associated Golgi protein JT727_03520 PF01053 Cys/Met metabolism PLP-dependent enzyme JT727_03525 PF01618 MotA/TolQ/ExbB proton channel family JT727_03530 PF02472 Biopolymer transport protein ExbD/TolR JT727_03540 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JT727_03540 PF04616 Glycosyl hydrolases family 43 JT727_03545 PF03350 Uncharacterized protein family, UPF0114 JT727_03550 PF01738 Dienelactone hydrolase family JT727_03555 PF11115 Protein of unknown function (DUF2623) JT727_03560 PF02798 Glutathione S-transferase, N-terminal domain JT727_03575 PF05257 CHAP domain JT727_03575 PF03738 Glutathionylspermidine synthase preATP-grasp JT727_03580 PF00155 Aminotransferase class I and II JT727_03600 PF03466 LysR substrate binding domain JT727_03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_03605 PF01053 Cys/Met metabolism PLP-dependent enzyme JT727_03610 PF00291 Pyridoxal-phosphate dependent enzyme JT727_03610 PF00571 CBS domain JT727_03620 PF04474 Protein of unknown function (DUF554) JT727_03625 PF01276 Orn/Lys/Arg decarboxylase, major domain JT727_03625 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JT727_03625 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JT727_03630 PF03825 Nucleoside H+ symporter JT727_03635 PF01464 Transglycosylase SLT domain JT727_03635 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JT727_03640 PF04362 Bacterial Fe(2+) trafficking JT727_03645 PF10576 Iron-sulfur binding domain of endonuclease III JT727_03645 PF00633 Helix-hairpin-helix motif JT727_03645 PF14815 NUDIX domain JT727_03645 PF00730 HhH-GPD superfamily base excision DNA repair protein JT727_03650 PF02390 Putative methyltransferase JT727_03655 PF04320 Protein with unknown function (DUF469) JT727_03660 PF11101 Protein of unknown function (DUF2884) JT727_03665 PF06969 HemN C-terminal domain JT727_03665 PF04055 Radical SAM superfamily JT727_03670 PF01725 Ham1 family JT727_03675 PF02594 Uncharacterised ACR, YggU family COG1872 JT727_03680 PF02325 YGGT family JT727_03685 PF01168 Alanine racemase, N-terminal domain JT727_03690 PF00437 Type II/IV secretion system protein JT727_03695 PF00196 Bacterial regulatory proteins, luxR family JT727_03700 PF03652 Holliday junction resolvase JT727_03705 PF02622 Uncharacterized ACR, COG1678 JT727_03710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JT727_03710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JT727_03715 PF04452 RNA methyltransferase JT727_03720 PF04231 Endonuclease I JT727_03725 PF17283 SprT-like zinc ribbon domain JT727_03725 PF10263 SprT-like family JT727_03730 PF00083 Sugar (and other) transporter JT727_03735 PF02772 S-adenosylmethionine synthetase, central domain JT727_03735 PF00438 S-adenosylmethionine synthetase, N-terminal domain JT727_03735 PF02773 S-adenosylmethionine synthetase, C-terminal domain JT727_03750 PF17810 Arginine decarboxylase helical bundle domain JT727_03750 PF17944 Arginine decarboxylase C-terminal helical extension JT727_03750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JT727_03755 PF00491 Arginase family JT727_03760 PF03573 outer membrane porin, OprD family JT727_03765 PF01435 Peptidase family M48 JT727_03770 PF02780 Transketolase, C-terminal domain JT727_03770 PF00456 Transketolase, thiamine diphosphate binding domain JT727_03770 PF02779 Transketolase, pyrimidine binding domain JT727_03775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JT727_03775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JT727_03780 PF00162 Phosphoglycerate kinase JT727_03785 PF01116 Fructose-bisphosphate aldolase class-II JT727_03790 PF00924 Mechanosensitive ion channel JT727_03790 PF05552 Conserved TM helix JT727_03795 PF01810 LysE type translocator JT727_03800 PF04402 Protein of unknown function (DUF541) JT727_03805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_03805 PF03466 LysR substrate binding domain JT727_03810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JT727_03815 PF01842 ACT domain JT727_03815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT727_03815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT727_03820 PF01812 5-formyltetrahydrofolate cyclo-ligase family JT727_03830 PF05164 Cell division protein ZapA JT727_03835 PF03695 Uncharacterised protein family (UPF0149) JT727_03840 PF05195 Aminopeptidase P, N-terminal domain JT727_03840 PF00557 Metallopeptidase family M24 JT727_03845 PF01494 FAD binding domain JT727_03850 PF01494 FAD binding domain JT727_03855 PF01571 Aminomethyltransferase folate-binding domain JT727_03855 PF08669 Glycine cleavage T-protein C-terminal barrel domain JT727_03860 PF01597 Glycine cleavage H-protein JT727_03865 PF02347 Glycine cleavage system P-protein JT727_03875 PF00578 AhpC/TSA family JT727_03895 PF00232 Glycosyl hydrolase family 1 JT727_03900 PF01418 Helix-turn-helix domain, rpiR family JT727_03900 PF01380 SIS domain JT727_03905 PF04266 ASCH domain JT727_03910 PF03006 Haemolysin-III related JT727_03915 PF01571 Aminomethyltransferase folate-binding domain JT727_03920 PF03937 Flavinator of succinate dehydrogenase JT727_03925 PF07254 Membrane-bound toxin component of toxin-antitoxin system JT727_03930 PF00258 Flavodoxin JT727_03935 PF00589 Phage integrase family JT727_03935 PF02899 Phage integrase, N-terminal SAM-like domain JT727_03940 PF10411 Disulfide bond isomerase protein N-terminus JT727_03940 PF13098 Thioredoxin-like domain JT727_03945 PF17768 RecJ OB domain JT727_03945 PF01368 DHH family JT727_03945 PF02272 DHHA1 domain JT727_03955 PF00152 tRNA synthetases class II (D, K and N) JT727_03955 PF01336 OB-fold nucleic acid binding domain JT727_03960 PF00293 NUDIX domain JT727_03965 PF01551 Peptidase family M23 JT727_03965 PF01476 LysM domain JT727_03975 PF07690 Major Facilitator Superfamily JT727_03980 PF03466 LysR substrate binding domain JT727_03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_03990 PF00248 Aldo/keto reductase family JT727_03995 PF02525 Flavodoxin-like fold JT727_04005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_04005 PF03466 LysR substrate binding domain JT727_04025 PF01022 Bacterial regulatory protein, arsR family JT727_04030 PF02040 Arsenical pump membrane protein JT727_04035 PF03960 ArsC family JT727_04040 PF00854 POT family JT727_04045 PF08986 Domain of unknown function (DUF1889) JT727_04050 PF02321 Outer membrane efflux protein JT727_04055 PF04632 Fusaric acid resistance protein family JT727_04060 PF00529 HlyD membrane-fusion protein of T1SS JT727_04060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_04065 PF17090 Uncharacterised protein family JT727_04070 PF06902 Divergent 4Fe-4S mono-cluster JT727_04075 PF14542 GCN5-related N-acetyl-transferase JT727_04085 PF00419 Fimbrial protein JT727_04085 PF09160 FimH, mannose binding JT727_04095 PF00419 Fimbrial protein JT727_04100 PF00577 Outer membrane usher protein JT727_04100 PF13953 PapC C-terminal domain JT727_04100 PF13954 PapC N-terminal domain JT727_04105 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_04105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_04110 PF00419 Fimbrial protein JT727_04115 PF00419 Fimbrial protein JT727_04120 PF00589 Phage integrase family JT727_04125 PF00589 Phage integrase family JT727_04130 PF03824 High-affinity nickel-transport protein JT727_04135 PF01047 MarR family JT727_04140 PF00892 EamA-like transporter family JT727_04150 PF00419 Fimbrial protein JT727_04155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_04155 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_04160 PF13953 PapC C-terminal domain JT727_04160 PF00577 Outer membrane usher protein JT727_04160 PF13954 PapC N-terminal domain JT727_04165 PF00419 Fimbrial protein JT727_04180 PF00196 Bacterial regulatory proteins, luxR family JT727_04180 PF00072 Response regulator receiver domain JT727_04190 PF00248 Aldo/keto reductase family JT727_04195 PF03222 Tryptophan/tyrosine permease family JT727_04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_04205 PF03466 LysR substrate binding domain JT727_04210 PF02803 Thiolase, C-terminal domain JT727_04210 PF00108 Thiolase, N-terminal domain JT727_04215 PF06178 Oligogalacturonate-specific porin protein (KdgM) JT727_04220 PF14583 Oligogalacturonate lyase JT727_04230 PF00083 Sugar (and other) transporter JT727_04235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT727_04235 PF00356 Bacterial regulatory proteins, lacI family JT727_04245 PF01306 LacY proton/sugar symporter JT727_04250 PF00251 Glycosyl hydrolases family 32 N-terminal domain JT727_04250 PF08244 Glycosyl hydrolases family 32 C terminal JT727_04265 PF17912 MalK OB fold domain JT727_04265 PF00005 ABC transporter JT727_04270 PF00528 Binding-protein-dependent transport system inner membrane component JT727_04275 PF00528 Binding-protein-dependent transport system inner membrane component JT727_04280 PF16867 Dimethlysulfonioproprionate lyase JT727_04285 PF01177 Asp/Glu/Hydantoin racemase JT727_04290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_04290 PF03466 LysR substrate binding domain JT727_04295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JT727_04295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JT727_04300 PF00356 Bacterial regulatory proteins, lacI family JT727_04305 PF02378 Phosphotransferase system, EIIC JT727_04310 PF00232 Glycosyl hydrolase family 1 JT727_04315 PF00392 Bacterial regulatory proteins, gntR family JT727_04315 PF07729 FCD domain JT727_04325 PF00356 Bacterial regulatory proteins, lacI family JT727_04335 PF00501 AMP-binding enzyme JT727_04335 PF01553 Acyltransferase JT727_04340 PF07690 Major Facilitator Superfamily JT727_04345 PF00248 Aldo/keto reductase family JT727_04350 PF06004 Bacterial protein of unknown function (DUF903) JT727_04355 PF03741 Integral membrane protein TerC family JT727_04360 PF02976 DNA mismatch repair enzyme MutH JT727_04370 PF00293 NUDIX domain JT727_04375 PF05524 PEP-utilising enzyme, N-terminal JT727_04375 PF02896 PEP-utilising enzyme, TIM barrel domain JT727_04375 PF01590 GAF domain JT727_04375 PF00391 PEP-utilising enzyme, mobile domain JT727_04380 PF01790 Prolipoprotein diacylglyceryl transferase JT727_04385 PF00303 Thymidylate synthase JT727_04390 PF07963 Prokaryotic N-terminal methylation motif JT727_04395 PF07963 Prokaryotic N-terminal methylation motif JT727_04400 PF10713 Protein of unknown function (DUF2509) JT727_04405 PF12528 Type II secretion prepilin peptidase dependent protein C JT727_04405 PF07963 Prokaryotic N-terminal methylation motif JT727_04410 PF17946 RecC C-terminal domain JT727_04415 PF16187 Middle or third domain of peptidase_M16 JT727_04415 PF05193 Peptidase M16 inactive domain JT727_04415 PF00675 Insulinase (Peptidase family M16) JT727_04420 PF00580 UvrD/REP helicase N-terminal domain JT727_04420 PF13361 UvrD-like helicase C-terminal domain JT727_04420 PF12705 PD-(D/E)XK nuclease superfamily JT727_04425 PF13538 UvrD-like helicase C-terminal domain JT727_04435 PF00696 Amino acid kinase family JT727_04435 PF00583 Acetyltransferase (GNAT) family JT727_04440 PF01520 N-acetylmuramoyl-L-alanine amidase JT727_04440 PF11741 AMIN domain JT727_04445 PF00155 Aminotransferase class I and II JT727_04450 PF00288 GHMP kinases N terminal domain JT727_04455 PF00871 Acetokinase family JT727_04460 PF10662 Ethanolamine utilisation - propanediol utilisation JT727_04465 PF00936 BMC domain JT727_04475 PF10531 SLBB domain JT727_04475 PF13375 RnfC Barrel sandwich hybrid domain JT727_04475 PF13237 4Fe-4S dicluster domain JT727_04475 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JT727_04480 PF00465 Iron-containing alcohol dehydrogenase JT727_04480 PF00171 Aldehyde dehydrogenase family JT727_04485 PF00171 Aldehyde dehydrogenase family JT727_04490 PF01923 Cobalamin adenosyltransferase JT727_04495 PF03319 Ethanolamine utilisation protein EutN/carboxysome JT727_04505 PF06130 Phosphate propanoyltransferase JT727_04510 PF00936 BMC domain JT727_04515 PF00936 BMC domain JT727_04525 PF08841 Diol dehydratase reactivase ATPase-like domain JT727_04525 PF18427 DD-reactivating factor swiveling domain JT727_04530 PF02287 Dehydratase small subunit JT727_04535 PF02288 Dehydratase medium subunit JT727_04540 PF02286 Dehydratase large subunit JT727_04545 PF00936 BMC domain JT727_04550 PF00936 BMC domain JT727_04555 PF00230 Major intrinsic protein JT727_04560 PF12833 Helix-turn-helix domain JT727_04560 PF10114 Sensory domain found in PocR JT727_04565 PF07685 CobB/CobQ-like glutamine amidotransferase domain JT727_04565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JT727_04570 PF03186 CobD/Cbib protein JT727_04575 PF02570 Precorrin-8X methylmutase JT727_04580 PF01888 CbiD JT727_04585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT727_04590 PF05175 Methyltransferase small domain JT727_04595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT727_04600 PF11760 Cobalamin synthesis G N-terminal JT727_04600 PF11761 Cobalamin biosynthesis central region JT727_04600 PF01890 Cobalamin synthesis G C-terminus JT727_04605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT727_04610 PF02571 Precorrin-6x reductase CbiJ/CobK JT727_04615 PF06180 Cobalt chelatase (CbiK) JT727_04620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT727_04625 PF01891 Cobalt uptake substrate-specific transmembrane region JT727_04630 PF02553 Cobalt transport protein component CbiN JT727_04635 PF02361 Cobalt transport protein JT727_04640 PF00005 ABC transporter JT727_04645 PF07685 CobB/CobQ-like glutamine amidotransferase domain JT727_04650 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JT727_04655 PF02277 Phosphoribosyltransferase JT727_04675 PF03562 MltA specific insert domain JT727_04675 PF06725 3D domain JT727_04680 PF00899 ThiF family JT727_04685 PF02657 Fe-S metabolism associated domain JT727_04690 PF00266 Aminotransferase class-V JT727_04695 PF06004 Bacterial protein of unknown function (DUF903) JT727_04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_04700 PF03466 LysR substrate binding domain JT727_04705 PF04241 Protein of unknown function (DUF423) JT727_04710 PF18125 RlmM ferredoxin-like domain JT727_04710 PF01728 FtsJ-like methyltransferase JT727_04715 PF00455 DeoR C terminal sensor domain JT727_04715 PF08220 DeoR-like helix-turn-helix domain JT727_04720 PF05025 RbsD / FucU transport protein family JT727_04725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_04725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_04730 PF07881 L-fucose isomerase, first N-terminal domain JT727_04730 PF07882 L-fucose isomerase, second N-terminal domain JT727_04730 PF02952 L-fucose isomerase, C-terminal domain JT727_04735 PF07690 Major Facilitator Superfamily JT727_04740 PF00596 Class II Aldolase and Adducin N-terminal domain JT727_04745 PF00465 Iron-containing alcohol dehydrogenase JT727_04750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JT727_04750 PF01367 5'-3' exonuclease, C-terminal SAM fold JT727_04755 PF00158 Sigma-54 interaction domain JT727_04765 PF00296 Luciferase-like monooxygenase JT727_04775 PF00296 Luciferase-like monooxygenase JT727_04780 PF00005 ABC transporter JT727_04785 PF00528 Binding-protein-dependent transport system inner membrane component JT727_04790 PF03180 NLPA lipoprotein JT727_04795 PF07690 Major Facilitator Superfamily JT727_04805 PF09084 NMT1/THI5 like JT727_04810 PF03315 Serine dehydratase beta chain JT727_04810 PF03313 Serine dehydratase alpha chain JT727_04820 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JT727_04820 PF03641 Possible lysine decarboxylase JT727_04820 PF11892 Domain of unknown function (DUF3412) JT727_04825 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JT727_04825 PF14489 QueF-like protein JT727_04830 PF07348 Syd protein (SUKH-2) JT727_04835 PF04287 tRNA pseudouridine synthase C JT727_04840 PF00849 RNA pseudouridylate synthase JT727_04845 PF00258 Flavodoxin JT727_04850 PF07690 Major Facilitator Superfamily JT727_04855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT727_04855 PF13378 Enolase C-terminal domain-like JT727_04860 PF13378 Enolase C-terminal domain-like JT727_04865 PF02595 Glycerate kinase family JT727_04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_04870 PF00072 Response regulator receiver domain JT727_04870 PF01627 Hpt domain JT727_04870 PF00672 HAMP domain JT727_04870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JT727_04870 PF00512 His Kinase A (phospho-acceptor) domain JT727_04875 PF05958 tRNA (Uracil-5-)-methyltransferase JT727_04875 PF01938 TRAM domain JT727_04880 PF13291 ACT domain JT727_04880 PF04607 Region found in RelA / SpoT proteins JT727_04880 PF02824 TGS domain JT727_04885 PF03819 MazG nucleotide pyrophosphohydrolase domain JT727_04890 PF00117 Glutamine amidotransferase class-I JT727_04890 PF06418 CTP synthase N-terminus JT727_04895 PF03952 Enolase, N-terminal domain JT727_04895 PF00113 Enolase, C-terminal TIM barrel domain JT727_04905 PF04055 Radical SAM superfamily JT727_04910 PF01242 6-pyruvoyl tetrahydropterin synthase JT727_04915 PF00667 FAD binding domain JT727_04915 PF00175 Oxidoreductase NAD-binding domain JT727_04915 PF00258 Flavodoxin JT727_04920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JT727_04920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JT727_04925 PF01507 Phosphoadenosine phosphosulfate reductase family JT727_04930 PF04389 Peptidase family M28 JT727_04935 PF10414 Sirohaem synthase dimerisation region JT727_04935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT727_04935 PF14824 Sirohaem biosynthesis protein central JT727_04940 PF01507 Phosphoadenosine phosphosulfate reductase family JT727_04945 PF00009 Elongation factor Tu GTP binding domain JT727_04955 PF12084 Protein of unknown function (DUF3561) JT727_04960 PF04977 Septum formation initiator JT727_04965 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JT727_04970 PF02542 YgbB family JT727_04975 PF01142 tRNA pseudouridine synthase D (TruD) JT727_04980 PF01975 Survival protein SurE JT727_04990 PF01551 Peptidase family M23 JT727_04990 PF01476 LysM domain JT727_04995 PF04542 Sigma-70 region 2 JT727_04995 PF04545 Sigma-70, region 4 JT727_04995 PF04539 Sigma-70 region 3 JT727_04995 PF00140 Sigma-70 factor, region 1.2 JT727_05005 PF07690 Major Facilitator Superfamily JT727_05010 PF03466 LysR substrate binding domain JT727_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_05015 PF01047 MarR family JT727_05020 PF02441 Flavoprotein JT727_05025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JT727_05035 PF01848 Hok/gef family JT727_05040 PF01624 MutS domain I JT727_05040 PF05188 MutS domain II JT727_05040 PF00488 MutS domain V JT727_05040 PF05192 MutS domain III JT727_05040 PF05190 MutS family domain IV JT727_05060 PF00005 ABC transporter JT727_05065 PF01032 FecCD transport family JT727_05070 PF01497 Periplasmic binding protein JT727_05075 PF05171 Haemin-degrading HemS.ChuX domain JT727_05080 PF00593 TonB dependent receptor JT727_05080 PF07715 TonB-dependent Receptor Plug Domain JT727_05090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_05090 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_05090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_05095 PF03547 Membrane transport protein JT727_05105 PF11756 Nitrous oxide-stimulated promoter JT727_05110 PF00950 ABC 3 transport family JT727_05115 PF00950 ABC 3 transport family JT727_05120 PF00005 ABC transporter JT727_05125 PF01297 Zinc-uptake complex component A periplasmic JT727_05130 PF00356 Bacterial regulatory proteins, lacI family JT727_05135 PF00480 ROK family JT727_05140 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT727_05145 PF02378 Phosphotransferase system, EIIC JT727_05150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_05155 PF02378 Phosphotransferase system, EIIC JT727_05160 PF02264 LamB porin JT727_05170 PF00232 Glycosyl hydrolase family 1 JT727_05175 PF00158 Sigma-54 interaction domain JT727_05175 PF01590 GAF domain JT727_05175 PF02954 Bacterial regulatory protein, Fis family JT727_05180 PF02769 AIR synthase related protein, C-terminal domain JT727_05180 PF00586 AIR synthase related protein, N-terminal domain JT727_05185 PF01924 Hydrogenase formation hypA family JT727_05190 PF01455 HupF/HypC family JT727_05195 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT727_05200 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JT727_05205 PF11046 Transcriptional repressor of hyc and hyp operons JT727_05210 PF13247 4Fe-4S dicluster domain JT727_05215 PF00361 Proton-conducting membrane transporter JT727_05220 PF00146 NADH dehydrogenase JT727_05225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JT727_05225 PF00374 Nickel-dependent hydrogenase JT727_05225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JT727_05230 PF12838 4Fe-4S dicluster domain JT727_05235 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JT727_05240 PF07450 Formate hydrogenlyase maturation protein HycH JT727_05245 PF01750 Hydrogenase maturation protease JT727_05250 PF08845 Toxin SymE, type I toxin-antitoxin system JT727_05255 PF00232 Glycosyl hydrolase family 1 JT727_05260 PF02378 Phosphotransferase system, EIIC JT727_05260 PF00367 phosphotransferase system, EIIB JT727_05265 PF00356 Bacterial regulatory proteins, lacI family JT727_05270 PF13247 4Fe-4S dicluster domain JT727_05270 PF12800 4Fe-4S binding domain JT727_05275 PF07503 HypF finger JT727_05275 PF01300 Telomere recombination JT727_05275 PF00708 Acylphosphatase JT727_05275 PF17788 HypF Kae1-like domain JT727_05280 PF03824 High-affinity nickel-transport protein JT727_05285 PF18113 Rubredoxin binding C-terminal domain JT727_05285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_05290 PF00258 Flavodoxin JT727_05290 PF00753 Metallo-beta-lactamase superfamily JT727_05290 PF00301 Rubredoxin JT727_05295 PF00158 Sigma-54 interaction domain JT727_05295 PF01590 GAF domain JT727_05300 PF00571 CBS domain JT727_05300 PF01380 SIS domain JT727_05305 PF08220 DeoR-like helix-turn-helix domain JT727_05305 PF00455 DeoR C terminal sensor domain JT727_05310 PF06923 Glucitol operon activator protein (GutM) JT727_05315 PF00106 short chain dehydrogenase JT727_05320 PF03829 PTS system glucitol/sorbitol-specific IIA component JT727_05325 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JT727_05325 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JT727_05330 PF03608 PTS system enzyme II sorbitol-specific factor JT727_05335 PF13406 Transglycosylase SLT domain JT727_05340 PF00005 ABC transporter JT727_05345 PF00950 ABC 3 transport family JT727_05350 PF01297 Zinc-uptake complex component A periplasmic JT727_05355 PF02464 Competence-damaged protein JT727_05360 PF00154 recA bacterial DNA recombination protein JT727_05365 PF02631 RecX family JT727_05370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JT727_05370 PF02272 DHHA1 domain JT727_05370 PF01411 tRNA synthetases class II (A) JT727_05375 PF02599 Global regulator protein family JT727_05405 PF04972 BON domain JT727_05410 PF13419 Haloacid dehalogenase-like hydrolase JT727_05415 PF09335 SNARE associated Golgi protein JT727_05420 PF04262 Glutamate-cysteine ligase JT727_05425 PF02664 S-Ribosylhomocysteinase (LuxS) JT727_05430 PF12833 Helix-turn-helix domain JT727_05430 PF12852 Cupin JT727_05435 PF00682 HMGL-like JT727_05435 PF08502 LeuA allosteric (dimerisation) domain JT727_05440 PF07690 Major Facilitator Superfamily JT727_05445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_05445 PF00529 HlyD membrane-fusion protein of T1SS JT727_05450 PF01047 MarR family JT727_05455 PF05437 Branched-chain amino acid transport protein (AzlD) JT727_05460 PF03591 AzlC protein JT727_05465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JT727_05470 PF00528 Binding-protein-dependent transport system inner membrane component JT727_05475 PF00571 CBS domain JT727_05475 PF00005 ABC transporter JT727_05480 PF00268 Ribonucleotide reductase, small chain JT727_05485 PF00317 Ribonucleotide reductase, all-alpha domain JT727_05485 PF08343 Ribonucleotide reductase N-terminal JT727_05485 PF02867 Ribonucleotide reductase, barrel domain JT727_05490 PF07972 NrdI Flavodoxin like JT727_05495 PF00462 Glutaredoxin JT727_05500 PF02627 Carboxymuconolactone decarboxylase family JT727_05505 PF00155 Aminotransferase class I and II JT727_05505 PF00392 Bacterial regulatory proteins, gntR family JT727_05510 PF05957 Bacterial protein of unknown function (DUF883) JT727_05515 PF09400 Protein of unknown function (DUF2002) JT727_05520 PF06610 L-alanine exporter JT727_05525 PF00816 H-NS histone family JT727_05540 PF11127 Protein of unknown function (DUF2892) JT727_05540 PF00581 Rhodanese-like domain JT727_05545 PF01022 Bacterial regulatory protein, arsR family JT727_05550 PF02525 Flavodoxin-like fold JT727_05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_05555 PF03466 LysR substrate binding domain JT727_05560 PF01590 GAF domain JT727_05560 PF02954 Bacterial regulatory protein, Fis family JT727_05560 PF00158 Sigma-54 interaction domain JT727_05565 PF00171 Aldehyde dehydrogenase family JT727_05570 PF16970 Type-1 fimbrial protein, A JT727_05575 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_05575 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_05580 PF13954 PapC N-terminal domain JT727_05580 PF00577 Outer membrane usher protein JT727_05580 PF13953 PapC C-terminal domain JT727_05595 PF00577 Outer membrane usher protein JT727_05595 PF13954 PapC N-terminal domain JT727_05595 PF13953 PapC C-terminal domain JT727_05600 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_05600 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_05605 PF00419 Fimbrial protein JT727_05610 PF00072 Response regulator receiver domain JT727_05610 PF00196 Bacterial regulatory proteins, luxR family JT727_05625 PF00106 short chain dehydrogenase JT727_05630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT727_05635 PF00596 Class II Aldolase and Adducin N-terminal domain JT727_05640 PF00005 ABC transporter JT727_05645 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_05660 PF00491 Arginase family JT727_05665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_05665 PF03466 LysR substrate binding domain JT727_05700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_05700 PF00529 HlyD membrane-fusion protein of T1SS JT727_05705 PF12833 Helix-turn-helix domain JT727_05705 PF06445 GyrI-like small molecule binding domain JT727_05715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_05715 PF03466 LysR substrate binding domain JT727_05730 PF01668 SmpB protein JT727_05735 PF03364 Polyketide cyclase / dehydrase and lipid transport JT727_05740 PF03658 RnfH family Ubiquitin JT727_05745 PF04355 SmpA / OmlA family JT727_05750 PF02463 RecF/RecN/SMC N terminal domain JT727_05755 PF01513 ATP-NAD kinase JT727_05760 PF01025 GrpE JT727_05765 PF00571 CBS domain JT727_05765 PF03471 Transporter associated domain JT727_05765 PF01595 Cyclin M transmembrane N-terminal domain JT727_05770 PF01578 Cytochrome C assembly protein JT727_05775 PF00448 SRP54-type protein, GTPase domain JT727_05775 PF02881 SRP54-type protein, helical bundle domain JT727_05775 PF02978 Signal peptide binding domain JT727_05780 PF00886 Ribosomal protein S16 JT727_05785 PF01782 RimM N-terminal domain JT727_05785 PF05239 PRC-barrel domain JT727_05790 PF01746 tRNA (Guanine-1)-methyltransferase JT727_05795 PF01245 Ribosomal protein L19 JT727_05810 PF00691 OmpA family JT727_05815 PF17152 Periplasmic sensor domain JT727_05815 PF00990 Diguanylate cyclase, GGDEF domain JT727_05820 PF13689 YfiR/HmsC-like JT727_05825 PF00793 DAHP synthetase I family JT727_05830 PF02153 Prephenate dehydrogenase JT727_05830 PF01817 Chorismate mutase type II JT727_05835 PF08450 SMP-30/Gluconolactonase/LRE-like region JT727_05840 PF01817 Chorismate mutase type II JT727_05840 PF00800 Prephenate dehydratase JT727_05850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JT727_05855 PF13525 Outer membrane lipoprotein JT727_05860 PF00849 RNA pseudouridylate synthase JT727_05860 PF01479 S4 domain JT727_05865 PF02578 Multi-copper polyphenol oxidoreductase laccase JT727_05870 PF07724 AAA domain (Cdc48 subfamily) JT727_05870 PF17871 AAA lid domain JT727_05870 PF02861 Clp amino terminal domain, pathogenicity island component JT727_05870 PF10431 C-terminal, D2-small domain, of ClpB protein JT727_05870 PF00004 ATPase family associated with various cellular activities (AAA) JT727_05895 PF00083 Sugar (and other) transporter JT727_05900 PF10043 Predicted periplasmic lipoprotein (DUF2279) JT727_05905 PF13091 PLD-like domain JT727_05910 PF13380 CoA binding domain JT727_05910 PF13607 Succinyl-CoA ligase like flavodoxin domain JT727_05910 PF00583 Acetyltransferase (GNAT) family JT727_05915 PF03942 DTW domain JT727_05920 PF00085 Thioredoxin JT727_05925 PF08032 RNA 2'-O ribose methyltransferase substrate binding JT727_05925 PF00588 SpoU rRNA Methylase family JT727_05930 PF03167 Uracil DNA glycosylase superfamily JT727_05935 PF01228 Glycine radical JT727_05940 PF00270 DEAD/DEAH box helicase JT727_05940 PF00271 Helicase conserved C-terminal domain JT727_05945 PF05175 Methyltransferase small domain JT727_05950 PF00890 FAD binding domain JT727_05950 PF02910 Fumarate reductase flavoprotein C-term JT727_05960 PF04542 Sigma-70 region 2 JT727_05960 PF08281 Sigma-70, region 4 JT727_05965 PF03873 Anti sigma-E protein RseA, C-terminal domain JT727_05965 PF03872 Anti sigma-E protein RseA, N-terminal domain JT727_05970 PF03888 MucB/RseB N-terminal domain JT727_05970 PF17188 MucB/RseB C-terminal domain JT727_05980 PF00009 Elongation factor Tu GTP binding domain JT727_05980 PF00679 Elongation factor G C-terminus JT727_05980 PF03144 Elongation factor Tu domain 2 JT727_05980 PF06421 GTP-binding protein LepA C-terminus JT727_05985 PF10502 Signal peptidase, peptidase S26 JT727_05990 PF14622 Ribonuclease-III-like JT727_05990 PF00035 Double-stranded RNA binding motif JT727_05995 PF07650 KH domain JT727_05995 PF01926 50S ribosome-binding GTPase JT727_06000 PF02565 Recombination protein O C terminal JT727_06000 PF11967 Recombination protein O N terminal JT727_06005 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JT727_06010 PF01648 4'-phosphopantetheinyl transferase superfamily JT727_06015 PF12838 4Fe-4S dicluster domain JT727_06020 PF01418 Helix-turn-helix domain, rpiR family JT727_06020 PF01380 SIS domain JT727_06030 PF14437 MafB19-like deaminase JT727_06035 PF01464 Transglycosylase SLT domain JT727_06035 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_06040 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JT727_06040 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JT727_06040 PF02769 AIR synthase related protein, C-terminal domain JT727_06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_06045 PF00512 His Kinase A (phospho-acceptor) domain JT727_06050 PF13942 YfhG lipoprotein JT727_06055 PF00158 Sigma-54 interaction domain JT727_06055 PF00072 Response regulator receiver domain JT727_06060 PF00543 Nitrogen regulatory protein P-II JT727_06065 PF00175 Oxidoreductase NAD-binding domain JT727_06065 PF00970 Oxidoreductase FAD-binding domain JT727_06065 PF00042 Globin JT727_06070 PF00464 Serine hydroxymethyltransferase JT727_06075 PF07681 DoxX JT727_06080 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_06080 PF14759 Reductase C-terminal JT727_06085 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JT727_06090 PF07745 Glycosyl hydrolase family 53 JT727_06095 PF00267 Gram-negative porin JT727_06100 PF01301 Glycosyl hydrolases family 35 JT727_06105 PF01306 LacY proton/sugar symporter JT727_06110 PF00480 ROK family JT727_06115 PF13181 Tetratricopeptide repeat JT727_06115 PF17128 Domain of unknown function (DUF5107) JT727_06120 PF00083 Sugar (and other) transporter JT727_06125 PF01263 Aldose 1-epimerase JT727_06130 PF12832 MFS_1 like family JT727_06135 PF00874 PRD domain JT727_06140 PF06226 Protein of unknown function (DUF1007) JT727_06145 PF03824 High-affinity nickel-transport protein JT727_06155 PF00459 Inositol monophosphatase family JT727_06160 PF00588 SpoU rRNA Methylase family JT727_06165 PF02082 Transcriptional regulator JT727_06170 PF00266 Aminotransferase class-V JT727_06175 PF01592 NifU-like N terminal domain JT727_06180 PF01521 Iron-sulphur cluster biosynthesis JT727_06185 PF00226 DnaJ domain JT727_06185 PF07743 HSCB C-terminal oligomerisation domain JT727_06190 PF00012 Hsp70 protein JT727_06195 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_06200 PF04384 Iron-sulphur cluster assembly JT727_06205 PF12404 Peptidase JT727_06205 PF00883 Cytosol aminopeptidase family, catalytic domain JT727_06210 PF14581 SseB protein C-terminal domain JT727_06210 PF07179 SseB protein N-terminal domain JT727_06220 PF00581 Rhodanese-like domain JT727_06225 PF01835 MG2 domain JT727_06225 PF07678 A-macroglobulin TED domain JT727_06225 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JT727_06225 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JT727_06225 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JT727_06225 PF00207 Alpha-2-macroglobulin family JT727_06225 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JT727_06225 PF17962 Bacterial macroglobulin domain 6 JT727_06225 PF07703 Alpha-2-macroglobulin bait region domain JT727_06230 PF06832 Penicillin-Binding Protein C-terminus Family JT727_06230 PF00905 Penicillin binding protein transpeptidase domain JT727_06230 PF00912 Transglycosylase JT727_06235 PF00334 Nucleoside diphosphate kinase JT727_06240 PF04055 Radical SAM superfamily JT727_06245 PF13464 Domain of unknown function (DUF4115) JT727_06250 PF04551 GcpE protein JT727_06255 PF13393 Histidyl-tRNA synthetase JT727_06255 PF03129 Anticodon binding domain JT727_06260 PF09976 Tetratricopeptide repeat-like domain JT727_06265 PF13360 PQQ-like domain JT727_06270 PF01926 50S ribosome-binding GTPase JT727_06270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JT727_06290 PF07191 zinc-ribbons JT727_06295 PF02601 Exonuclease VII, large subunit JT727_06295 PF13742 OB-fold nucleic acid binding domain JT727_06300 PF00478 IMP dehydrogenase / GMP reductase domain JT727_06300 PF00571 CBS domain JT727_06305 PF00117 Glutamine amidotransferase class-I JT727_06305 PF02540 NAD synthase JT727_06305 PF00958 GMP synthase C terminal domain JT727_06310 PF00884 Sulfatase JT727_06315 PF13186 Iron-sulfur cluster-binding domain JT727_06315 PF04055 Radical SAM superfamily JT727_06325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_06325 PF03466 LysR substrate binding domain JT727_06330 PF11119 Protein of unknown function (DUF2633) JT727_06340 PF02541 Ppx/GppA phosphatase family JT727_06345 PF17941 Polyphosphate kinase C-terminal domain 1 JT727_06345 PF02503 Polyphosphate kinase middle domain JT727_06345 PF13089 Polyphosphate kinase N-terminal domain JT727_06345 PF13090 Polyphosphate kinase C-terminal domain 2 JT727_06350 PF00551 Formyl transferase JT727_06355 PF02769 AIR synthase related protein, C-terminal domain JT727_06355 PF00586 AIR synthase related protein, N-terminal domain JT727_06360 PF00480 ROK family JT727_06365 PF00232 Glycosyl hydrolase family 1 JT727_06375 PF00860 Permease family JT727_06385 PF04754 Putative transposase, YhgA-like JT727_06390 PF03960 ArsC family JT727_06395 PF01435 Peptidase family M48 JT727_06405 PF01594 AI-2E family transporter JT727_06410 PF00578 AhpC/TSA family JT727_06415 PF01842 ACT domain JT727_06420 PF00701 Dihydrodipicolinate synthetase family JT727_06425 PF06804 NlpB/DapX lipoprotein JT727_06430 PF01259 SAICAR synthetase JT727_06435 PF04228 Putative neutral zinc metallopeptidase JT727_06440 PF05127 Helicase JT727_06440 PF13718 GNAT acetyltransferase 2 JT727_06440 PF08351 Domain of unknown function (DUF1726) JT727_06440 PF17176 tRNA-binding domain JT727_06445 PF02230 Phospholipase/Carboxylesterase JT727_06450 PF13980 Uncharacterised protein family (UPF0370) JT727_06455 PF07687 Peptidase dimerisation domain JT727_06455 PF01546 Peptidase family M20/M25/M40 JT727_06460 PF03960 ArsC family JT727_06470 PF00873 AcrB/AcrD/AcrF family JT727_06475 PF13247 4Fe-4S dicluster domain JT727_06475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JT727_06475 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_06480 PF00293 NUDIX domain JT727_06485 PF06674 Protein of unknown function (DUF1176) JT727_06490 PF02780 Transketolase, C-terminal domain JT727_06490 PF02779 Transketolase, pyrimidine binding domain JT727_06490 PF00456 Transketolase, thiamine diphosphate binding domain JT727_06495 PF00923 Transaldolase/Fructose-6-phosphate aldolase JT727_06500 PF01515 Phosphate acetyl/butaryl transferase JT727_06500 PF03949 Malic enzyme, NAD binding domain JT727_06500 PF00390 Malic enzyme, N-terminal domain JT727_06505 PF00936 BMC domain JT727_06510 PF10662 Ethanolamine utilisation - propanediol utilisation JT727_06515 PF06249 Ethanolamine utilisation protein EutQ JT727_06520 PF01923 Cobalamin adenosyltransferase JT727_06525 PF01515 Phosphate acetyl/butaryl transferase JT727_06530 PF00936 BMC domain JT727_06535 PF03319 Ethanolamine utilisation protein EutN/carboxysome JT727_06540 PF00171 Aldehyde dehydrogenase family JT727_06550 PF00465 Iron-containing alcohol dehydrogenase JT727_06555 PF04346 Ethanolamine utilisation protein, EutH JT727_06560 PF06277 Ethanolamine utilisation protein EutA JT727_06565 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JT727_06570 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JT727_06575 PF00936 BMC domain JT727_06580 PF00936 BMC domain JT727_06580 PF16365 Ethanolamine utilization protein EutK C-terminus JT727_06585 PF12833 Helix-turn-helix domain JT727_06590 PF01218 Coproporphyrinogen III oxidase JT727_06595 PF01520 N-acetylmuramoyl-L-alanine amidase JT727_06600 PF00583 Acetyltransferase (GNAT) family JT727_06605 PF11143 Protein of unknown function (DUF2919) JT727_06610 PF06572 Protein of unknown function (DUF1131) JT727_06615 PF04261 Dyp-type peroxidase family JT727_06630 PF00528 Binding-protein-dependent transport system inner membrane component JT727_06635 PF00528 Binding-protein-dependent transport system inner membrane component JT727_06640 PF00005 ABC transporter JT727_06645 PF00291 Pyridoxal-phosphate dependent enzyme JT727_06650 PF13474 SnoaL-like domain JT727_06655 PF00392 Bacterial regulatory proteins, gntR family JT727_06655 PF00155 Aminotransferase class I and II JT727_06660 PF08543 Phosphomethylpyrimidine kinase JT727_06670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JT727_06675 PF05524 PEP-utilising enzyme, N-terminal JT727_06675 PF02896 PEP-utilising enzyme, TIM barrel domain JT727_06675 PF00391 PEP-utilising enzyme, mobile domain JT727_06680 PF00381 PTS HPr component phosphorylation site JT727_06685 PF00291 Pyridoxal-phosphate dependent enzyme JT727_06695 PF04354 ZipA, C-terminal FtsZ-binding domain JT727_06700 PF03120 NAD-dependent DNA ligase OB-fold domain JT727_06700 PF01653 NAD-dependent DNA ligase adenylation domain JT727_06700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JT727_06700 PF12826 Helix-hairpin-helix motif JT727_06700 PF00533 BRCA1 C Terminus (BRCT) domain JT727_06705 PF12843 Putative quorum-sensing-regulated virulence factor JT727_06710 PF13593 SBF-like CPA transporter family (DUF4137) JT727_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_06715 PF03466 LysR substrate binding domain JT727_06750 PF00749 tRNA synthetases class I (E and Q), catalytic domain JT727_06755 PF07037 Putative transcription regulator (DUF1323) JT727_06760 PF07037 Putative transcription regulator (DUF1323) JT727_06775 PF05231 MASE1 JT727_06775 PF00563 EAL domain JT727_06780 PF01773 Na+ dependent nucleoside transporter N-terminus JT727_06780 PF07670 Nucleoside recognition JT727_06780 PF07662 Na+ dependent nucleoside transporter C-terminus JT727_06785 PF01566 Natural resistance-associated macrophage protein JT727_06790 PF10697 Protein of unknown function (DUF2502) JT727_06795 PF00248 Aldo/keto reductase family JT727_06800 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_06800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_06800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_06805 PF00654 Voltage gated chloride channel JT727_06810 PF02685 Glucokinase JT727_06815 PF00072 Response regulator receiver domain JT727_06815 PF04397 LytTr DNA-binding domain JT727_06820 PF06580 Histidine kinase JT727_06820 PF07694 5TMR of 5TMR-LYT JT727_06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_06835 PF00155 Aminotransferase class I and II JT727_06845 PF07690 Major Facilitator Superfamily JT727_06850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JT727_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_06855 PF03466 LysR substrate binding domain JT727_06875 PF01226 Formate/nitrite transporter JT727_06880 PF04333 MlaA lipoprotein JT727_06885 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JT727_06890 PF04175 Protein of unknown function (DUF406) JT727_06895 PF00108 Thiolase, N-terminal domain JT727_06895 PF02803 Thiolase, C-terminal domain JT727_06900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT727_06900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT727_06900 PF00378 Enoyl-CoA hydratase/isomerase JT727_06905 PF00300 Histidine phosphatase superfamily (branch 1) JT727_06910 PF01713 Smr domain JT727_06915 PF05175 Methyltransferase small domain JT727_06920 PF01264 Chorismate synthase JT727_06925 PF03411 Penicillin-insensitive murein endopeptidase JT727_06930 PF01925 Sulfite exporter TauE/SafE JT727_06935 PF04315 Elongation factor P hydroxylase JT727_06940 PF08891 YfcL protein JT727_06945 PF01266 FAD dependent oxidoreductase JT727_06945 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JT727_06950 PF02801 Beta-ketoacyl synthase, C-terminal domain JT727_06950 PF00109 Beta-ketoacyl synthase, N-terminal domain JT727_06955 PF07690 Major Facilitator Superfamily JT727_06965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT727_06965 PF11890 Domain of unknown function (DUF3410) JT727_06965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT727_06970 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT727_06970 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT727_06975 PF01416 tRNA pseudouridine synthase JT727_06980 PF09335 SNARE associated Golgi protein JT727_06985 PF17848 Acetyl-coA carboxylase zinc finger domain JT727_06985 PF01039 Carboxyl transferase domain JT727_06990 PF08245 Mur ligase middle domain JT727_06990 PF02875 Mur ligase family, glutamate ligase domain JT727_06995 PF05036 Sporulation related domain JT727_07000 PF02674 Colicin V production protein JT727_07005 PF00156 Phosphoribosyl transferase domain JT727_07010 PF02441 Flavoprotein JT727_07020 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_07025 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_07030 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07035 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07040 PF00005 ABC transporter JT727_07045 PF13302 Acetyltransferase (GNAT) domain JT727_07055 PF01370 NAD dependent epimerase/dehydratase family JT727_07055 PF08338 Domain of unknown function (DUF1731) JT727_07060 PF02152 Dihydroneopterin aldolase JT727_07065 PF02798 Glutathione S-transferase, N-terminal domain JT727_07065 PF00043 Glutathione S-transferase, C-terminal domain JT727_07070 PF02798 Glutathione S-transferase, N-terminal domain JT727_07070 PF14834 Glutathione S-transferase, C-terminal domain JT727_07075 PF12850 Calcineurin-like phosphoesterase superfamily domain JT727_07080 PF00293 NUDIX domain JT727_07085 PF07085 DRTGG domain JT727_07085 PF01515 Phosphate acetyl/butaryl transferase JT727_07090 PF00871 Acetokinase family JT727_07095 PF04217 Protein of unknown function, DUF412 JT727_07100 PF03887 YfbU domain JT727_07105 PF13419 Haloacid dehalogenase-like hydrolase JT727_07110 PF03600 Citrate transporter JT727_07110 PF02080 TrkA-C domain JT727_07120 PF00155 Aminotransferase class I and II JT727_07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_07125 PF03466 LysR substrate binding domain JT727_07130 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JT727_07135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JT727_07140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JT727_07140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JT727_07150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JT727_07150 PF10531 SLBB domain JT727_07150 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JT727_07155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JT727_07155 PF01568 Molydopterin dinucleotide binding domain JT727_07155 PF00384 Molybdopterin oxidoreductase JT727_07155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT727_07160 PF00146 NADH dehydrogenase JT727_07165 PF12838 4Fe-4S dicluster domain JT727_07170 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JT727_07175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JT727_07180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JT727_07180 PF00361 Proton-conducting membrane transporter JT727_07185 PF00361 Proton-conducting membrane transporter JT727_07190 PF00361 Proton-conducting membrane transporter JT727_07195 PF12706 Beta-lactamase superfamily domain JT727_07200 PF13673 Acetyltransferase (GNAT) domain JT727_07205 PF00425 chorismate binding enzyme JT727_07210 PF16582 Middle domain of thiamine pyrophosphate JT727_07210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_07210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_07215 PF12697 Alpha/beta hydrolase family JT727_07220 PF00378 Enoyl-CoA hydratase/isomerase JT727_07225 PF13378 Enolase C-terminal domain-like JT727_07230 PF00501 AMP-binding enzyme JT727_07230 PF13193 AMP-binding enzyme C-terminal domain JT727_07235 PF00293 NUDIX domain JT727_07240 PF04754 Putative transposase, YhgA-like JT727_07245 PF07437 YfaZ precursor JT727_07250 PF00994 Probable molybdopterin binding domain JT727_07255 PF01614 Bacterial transcriptional regulator JT727_07255 PF09339 IclR helix-turn-helix domain JT727_07260 PF13378 Enolase C-terminal domain-like JT727_07260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT727_07265 PF07690 Major Facilitator Superfamily JT727_07270 PF03328 HpcH/HpaI aldolase/citrate lyase family JT727_07275 PF02754 Cysteine-rich domain JT727_07275 PF13183 4Fe-4S dicluster domain JT727_07280 PF00890 FAD binding domain JT727_07285 PF01266 FAD dependent oxidoreductase JT727_07285 PF04324 BFD-like [2Fe-2S] binding domain JT727_07290 PF07690 Major Facilitator Superfamily JT727_07300 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_07305 PF00268 Ribonucleotide reductase, small chain JT727_07310 PF03477 ATP cone domain JT727_07310 PF02867 Ribonucleotide reductase, barrel domain JT727_07310 PF00317 Ribonucleotide reductase, all-alpha domain JT727_07320 PF03989 DNA gyrase C-terminal domain, beta-propeller JT727_07320 PF00521 DNA gyrase/topoisomerase IV, subunit A JT727_07325 PF00512 His Kinase A (phospho-acceptor) domain JT727_07325 PF09456 RcsC Alpha-Beta-Loop (ABL) JT727_07325 PF00072 Response regulator receiver domain JT727_07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_07330 PF00196 Bacterial regulatory proteins, luxR family JT727_07330 PF00072 Response regulator receiver domain JT727_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_07335 PF16359 RcsD-ABL domain JT727_07335 PF01627 Hpt domain JT727_07340 PF00267 Gram-negative porin JT727_07345 PF02424 ApbE family JT727_07350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JT727_07350 PF12833 Helix-turn-helix domain JT727_07350 PF02805 Metal binding domain of Ada JT727_07350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JT727_07355 PF13532 2OG-Fe(II) oxygenase superfamily JT727_07360 PF00005 ABC transporter JT727_07365 PF03448 MgtE intracellular N domain JT727_07365 PF00571 CBS domain JT727_07365 PF01769 Divalent cation transporter JT727_07370 PF00916 Sulfate permease family JT727_07370 PF01740 STAS domain JT727_07375 PF06039 Malate:quinone oxidoreductase (Mqo) JT727_07380 PF03974 Ecotin JT727_07385 PF01594 AI-2E family transporter JT727_07395 PF11893 Domain of unknown function (DUF3413) JT727_07395 PF00884 Sulfatase JT727_07400 PF07208 Protein of unknown function (DUF1414) JT727_07405 PF04245 37-kD nucleoid-associated bacterial protein JT727_07410 PF08220 DeoR-like helix-turn-helix domain JT727_07410 PF00455 DeoR C terminal sensor domain JT727_07415 PF00293 NUDIX domain JT727_07420 PF00144 Beta-lactamase JT727_07430 PF01386 Ribosomal L25p family JT727_07435 PF04851 Type III restriction enzyme, res subunit JT727_07435 PF00271 Helicase conserved C-terminal domain JT727_07440 PF00849 RNA pseudouridylate synthase JT727_07440 PF01479 S4 domain JT727_07445 PF07690 Major Facilitator Superfamily JT727_07450 PF13989 YejG-like protein JT727_07455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_07455 PF00005 ABC transporter JT727_07460 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_07460 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07465 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_07475 PF00563 EAL domain JT727_07475 PF12792 CSS motif domain associated with EAL JT727_07480 PF00877 NlpC/P60 family JT727_07485 PF01569 PAP2 superfamily JT727_07490 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT727_07490 PF07683 Cobalamin synthesis protein cobW C-terminal domain JT727_07495 PF01232 Mannitol dehydrogenase Rossmann domain JT727_07495 PF08125 Mannitol dehydrogenase C-terminal domain JT727_07500 PF03786 D-mannonate dehydratase (UxuA) JT727_07505 PF09285 Elongation factor P, C-terminal JT727_07505 PF08207 Elongation factor P (EF-P) KOW-like domain JT727_07505 PF01132 Elongation factor P (EF-P) OB domain JT727_07510 PF03692 Putative zinc- or iron-chelating domain JT727_07520 PF07690 Major Facilitator Superfamily JT727_07525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_07525 PF00381 PTS HPr component phosphorylation site JT727_07530 PF00294 pfkB family carbohydrate kinase JT727_07535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_07535 PF02378 Phosphotransferase system, EIIC JT727_07540 PF01261 Xylose isomerase-like TIM barrel JT727_07545 PF03601 Conserved hypothetical protein 698 JT727_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_07550 PF03466 LysR substrate binding domain JT727_07555 PF00324 Amino acid permease JT727_07560 PF07715 TonB-dependent Receptor Plug Domain JT727_07560 PF00593 TonB dependent receptor JT727_07565 PF00756 Putative esterase JT727_07570 PF01227 GTP cyclohydrolase I JT727_07575 PF04235 Protein of unknown function (DUF418) JT727_07580 PF00356 Bacterial regulatory proteins, lacI family JT727_07585 PF13407 Periplasmic binding protein domain JT727_07590 PF00005 ABC transporter JT727_07595 PF02653 Branched-chain amino acid transport system / permease component JT727_07600 PF02698 DUF218 domain JT727_07605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JT727_07605 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JT727_07610 PF04172 LrgB-like family JT727_07615 PF03788 LrgA family JT727_07620 PF01207 Dihydrouridine synthase (Dus) JT727_07630 PF00874 PRD domain JT727_07630 PF03123 CAT RNA binding domain JT727_07635 PF02378 Phosphotransferase system, EIIC JT727_07635 PF00367 phosphotransferase system, EIIB JT727_07635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JT727_07640 PF00232 Glycosyl hydrolase family 1 JT727_07645 PF02321 Outer membrane efflux protein JT727_07650 PF09335 SNARE associated Golgi protein JT727_07655 PF04893 Yip1 domain JT727_07660 PF00768 D-alanyl-D-alanine carboxypeptidase JT727_07670 PF09330 D-lactate dehydrogenase, membrane binding JT727_07670 PF01565 FAD binding domain JT727_07675 PF01915 Glycosyl hydrolase family 3 C-terminal domain JT727_07675 PF14310 Fibronectin type III-like domain JT727_07675 PF00933 Glycosyl hydrolase family 3 N terminal domain JT727_07680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JT727_07685 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07690 PF00005 ABC transporter JT727_07695 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07705 PF06580 Histidine kinase JT727_07705 PF07694 5TMR of 5TMR-LYT JT727_07710 PF04397 LytTr DNA-binding domain JT727_07710 PF00072 Response regulator receiver domain JT727_07715 PF07308 Protein of unknown function (DUF1456) JT727_07720 PF09334 tRNA synthetases class I (M) JT727_07720 PF01588 Putative tRNA binding domain JT727_07725 PF10609 NUBPL iron-transfer P-loop NTPase JT727_07735 PF11776 Nickel/cobalt transporter regulator JT727_07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_07740 PF03466 LysR substrate binding domain JT727_07745 PF00860 Permease family JT727_07750 PF13382 Adenine deaminase C-terminal domain JT727_07750 PF01979 Amidohydrolase family JT727_07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_07755 PF03466 LysR substrate binding domain JT727_07835 PF02110 Hydroxyethylthiazole kinase family JT727_07840 PF08543 Phosphomethylpyrimidine kinase JT727_07845 PF01791 DeoC/LacD family aldolase JT727_07850 PF07690 Major Facilitator Superfamily JT727_07860 PF00106 short chain dehydrogenase JT727_07865 PF00356 Bacterial regulatory proteins, lacI family JT727_07870 PF04198 Putative sugar-binding domain JT727_07875 PF01232 Mannitol dehydrogenase Rossmann domain JT727_07875 PF08125 Mannitol dehydrogenase C-terminal domain JT727_07880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_07880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_07885 PF07690 Major Facilitator Superfamily JT727_07890 PF13419 Haloacid dehalogenase-like hydrolase JT727_07895 PF13378 Enolase C-terminal domain-like JT727_07895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT727_07900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_07905 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07910 PF00528 Binding-protein-dependent transport system inner membrane component JT727_07910 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_07915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_07915 PF00005 ABC transporter JT727_07920 PF00005 ABC transporter JT727_07920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_07925 PF00781 Diacylglycerol kinase catalytic domain JT727_07930 PF01136 Peptidase family U32 JT727_07930 PF16325 Peptidase family U32 C-terminal domain JT727_07935 PF00486 Transcriptional regulatory protein, C terminal JT727_07935 PF00072 Response regulator receiver domain JT727_07940 PF00512 His Kinase A (phospho-acceptor) domain JT727_07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_07940 PF00672 HAMP domain JT727_07945 PF07690 Major Facilitator Superfamily JT727_07950 PF00873 AcrB/AcrD/AcrF family JT727_07955 PF00873 AcrB/AcrD/AcrF family JT727_07960 PF13533 Biotin-lipoyl like JT727_07965 PF00375 Sodium:dicarboxylate symporter family JT727_07980 PF00486 Transcriptional regulatory protein, C terminal JT727_07980 PF00072 Response regulator receiver domain JT727_07985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_07985 PF00672 HAMP domain JT727_07985 PF00512 His Kinase A (phospho-acceptor) domain JT727_07985 PF13426 PAS domain JT727_07990 PF00012 Hsp70 protein JT727_07995 PF00730 HhH-GPD superfamily base excision DNA repair protein JT727_07995 PF06029 AlkA N-terminal domain JT727_08000 PF00485 Phosphoribulokinase / Uridine kinase family JT727_08005 PF00692 dUTPase JT727_08010 PF05170 AsmA family JT727_08015 PF00571 CBS domain JT727_08015 PF03741 Integral membrane protein TerC family JT727_08015 PF03471 Transporter associated domain JT727_08020 PF00483 Nucleotidyl transferase JT727_08025 PF01569 PAP2 superfamily JT727_08035 PF14052 Capsule assembly protein Wzi JT727_08040 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JT727_08040 PF02563 Polysaccharide biosynthesis/export protein JT727_08040 PF10531 SLBB domain JT727_08045 PF01451 Low molecular weight phosphotyrosine protein phosphatase JT727_08050 PF13807 G-rich domain on putative tyrosine kinase JT727_08050 PF02706 Chain length determinant protein JT727_08050 PF13614 AAA domain JT727_08055 PF02397 Bacterial sugar transferase JT727_08070 PF13439 Glycosyltransferase Family 4 JT727_08070 PF00534 Glycosyl transferases group 1 JT727_08075 PF13439 Glycosyltransferase Family 4 JT727_08075 PF00534 Glycosyl transferases group 1 JT727_08100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT727_08100 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JT727_08105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JT727_08105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JT727_08105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JT727_08115 PF01370 NAD dependent epimerase/dehydratase family JT727_08120 PF01061 ABC-2 type transporter JT727_08125 PF00005 ABC transporter JT727_08135 PF03275 UDP-galactopyranose mutase JT727_08145 PF13439 Glycosyltransferase Family 4 JT727_08145 PF00534 Glycosyl transferases group 1 JT727_08150 PF00535 Glycosyl transferase family 2 JT727_08150 PF01501 Glycosyl transferase family 8 JT727_08160 PF00535 Glycosyl transferase family 2 JT727_08170 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JT727_08170 PF01502 Phosphoribosyl-AMP cyclohydrolase JT727_08175 PF00977 Histidine biosynthesis protein JT727_08180 PF00977 Histidine biosynthesis protein JT727_08185 PF00117 Glutamine amidotransferase class-I JT727_08190 PF08645 Polynucleotide kinase 3 phosphatase JT727_08190 PF00475 Imidazoleglycerol-phosphate dehydratase JT727_08195 PF00155 Aminotransferase class I and II JT727_08200 PF00815 Histidinol dehydrogenase JT727_08205 PF08029 HisG, C-terminal domain JT727_08205 PF01634 ATP phosphoribosyltransferase JT727_08215 PF01370 NAD dependent epimerase/dehydratase family JT727_08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_08220 PF03466 LysR substrate binding domain JT727_08230 PF13520 Amino acid permease JT727_08235 PF01022 Bacterial regulatory protein, arsR family JT727_08240 PF14492 Elongation Factor G, domain II JT727_08240 PF03764 Elongation factor G, domain IV JT727_08240 PF00009 Elongation factor Tu GTP binding domain JT727_08240 PF03144 Elongation factor Tu domain 2 JT727_08240 PF00679 Elongation factor G C-terminus JT727_08245 PF08411 Exonuclease C-terminal JT727_08245 PF00929 Exonuclease JT727_08250 PF07943 Penicillin-binding protein 5, C-terminal domain JT727_08250 PF00768 D-alanyl-D-alanine carboxypeptidase JT727_08255 PF06445 GyrI-like small molecule binding domain JT727_08260 PF04632 Fusaric acid resistance protein family JT727_08265 PF04363 Protein of unknown function (DUF496) JT727_08270 PF02654 Cobalamin-5-phosphate synthase JT727_08275 PF02277 Phosphoribosyltransferase JT727_08280 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JT727_08280 PF05221 S-adenosyl-L-homocysteine hydrolase JT727_08290 PF14552 Tautomerase enzyme JT727_08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_08295 PF03466 LysR substrate binding domain JT727_08305 PF00083 Sugar (and other) transporter JT727_08305 PF07690 Major Facilitator Superfamily JT727_08315 PF00990 Diguanylate cyclase, GGDEF domain JT727_08315 PF13188 PAS domain JT727_08315 PF00563 EAL domain JT727_08315 PF03707 Bacterial signalling protein N terminal repeat JT727_08325 PF09313 Domain of unknown function (DUF1971) JT727_08330 PF08956 Domain of unknown function (DUF1869) JT727_08335 PF03466 LysR substrate binding domain JT727_08335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_08345 PF00561 alpha/beta hydrolase fold JT727_08350 PF00990 Diguanylate cyclase, GGDEF domain JT727_08365 PF01554 MatE JT727_08375 PF01048 Phosphorylase superfamily JT727_08375 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JT727_08385 PF12146 Serine aminopeptidase, S33 JT727_08395 PF08240 Alcohol dehydrogenase GroES-like domain JT727_08395 PF00107 Zinc-binding dehydrogenase JT727_08400 PF16925 Tetracyclin repressor-like, C-terminal domain JT727_08400 PF00440 Bacterial regulatory proteins, tetR family JT727_08405 PF00999 Sodium/hydrogen exchanger family JT727_08410 PF01734 Patatin-like phospholipase JT727_08425 PF01734 Patatin-like phospholipase JT727_08505 PF00437 Type II/IV secretion system protein JT727_08510 PF03743 Bacterial conjugation TrbI-like protein JT727_08515 PF03524 Conjugal transfer protein JT727_08540 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JT727_08545 PF04956 TrbC/VIRB2 family JT727_08590 PF00593 TonB dependent receptor JT727_08590 PF07715 TonB-dependent Receptor Plug Domain JT727_08595 PF13193 AMP-binding enzyme C-terminal domain JT727_08595 PF00501 AMP-binding enzyme JT727_08600 PF00975 Thioesterase domain JT727_08610 PF00550 Phosphopantetheine attachment site JT727_08610 PF00668 Condensation domain JT727_08610 PF16197 Ketoacyl-synthetase C-terminal extension JT727_08610 PF00698 Acyl transferase domain JT727_08610 PF02801 Beta-ketoacyl synthase, C-terminal domain JT727_08610 PF00109 Beta-ketoacyl synthase, N-terminal domain JT727_08615 PF00501 AMP-binding enzyme JT727_08615 PF00668 Condensation domain JT727_08615 PF08242 Methyltransferase domain JT727_08615 PF00550 Phosphopantetheine attachment site JT727_08625 PF08021 Siderophore-interacting FAD-binding domain JT727_08625 PF00005 ABC transporter JT727_08625 PF00664 ABC transporter transmembrane region JT727_08625 PF04954 Siderophore-interacting protein JT727_08630 PF00005 ABC transporter JT727_08630 PF00664 ABC transporter transmembrane region JT727_08635 PF07690 Major Facilitator Superfamily JT727_08640 PF00425 chorismate binding enzyme JT727_08645 PF13356 Arm DNA-binding domain JT727_08645 PF00589 Phage integrase family JT727_08660 PF01032 FecCD transport family JT727_08665 PF01475 Ferric uptake regulator family JT727_08670 PF01502 Phosphoribosyl-AMP cyclohydrolase JT727_08675 PF07683 Cobalamin synthesis protein cobW C-terminal domain JT727_08675 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT727_08690 PF01406 tRNA synthetases class I (C) catalytic domain JT727_08690 PF09190 DALR domain JT727_08700 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT727_08700 PF07683 Cobalamin synthesis protein cobW C-terminal domain JT727_08705 PF01258 Prokaryotic dksA/traR C4-type zinc finger JT727_08710 PF02649 Type I GTP cyclohydrolase folE2 JT727_08715 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_08730 PF00950 ABC 3 transport family JT727_08735 PF00950 ABC 3 transport family JT727_08740 PF00005 ABC transporter JT727_08745 PF01297 Zinc-uptake complex component A periplasmic JT727_08750 PF03129 Anticodon binding domain JT727_08750 PF02824 TGS domain JT727_08750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JT727_08750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JT727_08760 PF01979 Amidohydrolase family JT727_08765 PF00490 Delta-aminolevulinic acid dehydratase JT727_08775 PF01266 FAD dependent oxidoreductase JT727_08775 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JT727_08785 PF13358 DDE superfamily endonuclease JT727_08785 PF13592 Winged helix-turn helix JT727_08795 PF01297 Zinc-uptake complex component A periplasmic JT727_08800 PF00950 ABC 3 transport family JT727_08805 PF00005 ABC transporter JT727_08815 PF13356 Arm DNA-binding domain JT727_08815 PF00589 Phage integrase family JT727_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_08825 PF03466 LysR substrate binding domain JT727_08830 PF03466 LysR substrate binding domain JT727_08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_08835 PF03734 L,D-transpeptidase catalytic domain JT727_08835 PF17969 L,D-transpeptidase C-terminal domain JT727_08845 PF03466 LysR substrate binding domain JT727_08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_08855 PF06167 Glucose-regulated metallo-peptidase M90 JT727_08865 PF00267 Gram-negative porin JT727_08875 PF01966 HD domain JT727_08880 PF18284 DNA methylase N-terminal domain JT727_08880 PF00145 C-5 cytosine-specific DNA methylase JT727_08885 PF03852 DNA mismatch endonuclease Vsr JT727_08890 PF00892 EamA-like transporter family JT727_08895 PF05661 Protein of unknown function (DUF808) JT727_08900 PF17151 Periplasmic sensor domain JT727_08900 PF00990 Diguanylate cyclase, GGDEF domain JT727_08905 PF10733 Protein of unknown function (DUF2525) JT727_08910 PF10781 Dextransucrase DSRB JT727_08915 PF00196 Bacterial regulatory proteins, luxR family JT727_08920 PF13987 YedD-like protein JT727_08925 PF02806 Alpha amylase, C-terminal all-beta domain JT727_08925 PF00128 Alpha amylase, catalytic domain JT727_08930 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_08935 PF00291 Pyridoxal-phosphate dependent enzyme JT727_08940 PF00528 Binding-protein-dependent transport system inner membrane component JT727_08945 PF00005 ABC transporter JT727_08950 PF03472 Autoinducer binding domain JT727_08950 PF00196 Bacterial regulatory proteins, luxR family JT727_08955 PF10769 Protein of unknown function (DUF2594) JT727_08965 PF01541 GIY-YIG catalytic domain JT727_08965 PF02151 UvrB/uvrC motif JT727_08965 PF08459 UvrC Helix-hairpin-helix N-terminal JT727_08970 PF01066 CDP-alcohol phosphatidyltransferase JT727_08990 PF00701 Dihydrodipicolinate synthetase family JT727_08995 PF03695 Uncharacterised protein family (UPF0149) JT727_08995 PF02810 SEC-C motif JT727_09000 PF03222 Tryptophan/tyrosine permease family JT727_09005 PF10678 Protein of unknown function (DUF2492) JT727_09010 PF00210 Ferritin-like domain JT727_09025 PF07690 Major Facilitator Superfamily JT727_09030 PF10964 Protein of unknown function (DUF2766) JT727_09045 PF00210 Ferritin-like domain JT727_09055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT727_09060 PF00005 ABC transporter JT727_09065 PF02653 Branched-chain amino acid transport system / permease component JT727_09070 PF02358 Trehalose-phosphatase JT727_09075 PF00982 Glycosyltransferase family 20 JT727_09080 PF00582 Universal stress protein family JT727_09090 PF07470 Glycosyl Hydrolase Family 88 JT727_09095 PF05746 DALR anticodon binding domain JT727_09095 PF03485 Arginyl tRNA synthetase N terminal domain JT727_09095 PF00750 tRNA synthetases class I (R) JT727_09100 PF06185 YecM protein JT727_09105 PF03932 CutC family JT727_09110 PF08003 Protein of unknown function (DUF1698) JT727_09115 PF13649 Methyltransferase domain JT727_09120 PF01124 MAPEG family JT727_09125 PF01904 Protein of unknown function DUF72 JT727_09130 PF00857 Isochorismatase family JT727_09135 PF01336 OB-fold nucleic acid binding domain JT727_09135 PF02938 GAD domain JT727_09135 PF00152 tRNA synthetases class II (D, K and N) JT727_09140 PF00293 NUDIX domain JT727_09145 PF01709 Transcriptional regulator JT727_09150 PF02075 Crossover junction endodeoxyribonuclease RuvC JT727_09155 PF07499 RuvA, C-terminal domain JT727_09155 PF01330 RuvA N terminal domain JT727_09160 PF05496 Holliday junction DNA helicase RuvB P-loop domain JT727_09160 PF05491 RuvB C-terminal winged helix domain JT727_09160 PF17864 RuvB AAA lid domain JT727_09165 PF00950 ABC 3 transport family JT727_09170 PF00005 ABC transporter JT727_09175 PF01297 Zinc-uptake complex component A periplasmic JT727_09180 PF01551 Peptidase family M23 JT727_09180 PF01476 LysM domain JT727_09180 PF08525 Opacity-associated protein A N-terminal motif JT727_09185 PF03279 Bacterial lipid A biosynthesis acyltransferase JT727_09190 PF02887 Pyruvate kinase, alpha/beta domain JT727_09190 PF00224 Pyruvate kinase, barrel domain JT727_09195 PF01418 Helix-turn-helix domain, rpiR family JT727_09195 PF01380 SIS domain JT727_09205 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JT727_09205 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JT727_09210 PF00920 Dehydratase family JT727_09215 PF01081 KDPG and KHG aldolase JT727_09220 PF02222 ATP-grasp domain JT727_09225 PF07130 YebG protein JT727_09230 PF04391 Protein of unknown function (DUF533) JT727_09235 PF00326 Prolyl oligopeptidase family JT727_09235 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JT727_09240 PF00929 Exonuclease JT727_09245 PF06440 DNA polymerase III, theta subunit JT727_09250 PF04234 CopC domain JT727_09255 PF05425 Copper resistance protein D JT727_09260 PF10709 Protein of unknown function (DUF2511) JT727_09270 PF04393 Protein of unknown function (DUF535) JT727_09275 PF00149 Calcineurin-like phosphoesterase JT727_09280 PF07358 Protein of unknown function (DUF1482) JT727_09285 PF07351 Protein of unknown function (DUF1480) JT727_09290 PF01189 16S rRNA methyltransferase RsmB/F JT727_09290 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JT727_09290 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JT727_09295 PF02470 MlaD protein JT727_09300 PF04403 Paraquat-inducible protein A JT727_09305 PF13185 GAF domain JT727_09310 PF04352 ProQ/FINO family JT727_09310 PF17516 ProQ C-terminal domain JT727_09315 PF03572 Peptidase family S41 JT727_09315 PF11818 C-terminal domain of tail specific protease (DUF3340) JT727_09315 PF00595 PDZ domain JT727_09315 PF17804 Tail specific protease N-terminal domain JT727_09320 PF01435 Peptidase family M48 JT727_09325 PF07690 Major Facilitator Superfamily JT727_09330 PF09339 IclR helix-turn-helix domain JT727_09330 PF01614 Bacterial transcriptional regulator JT727_09335 PF13996 YobH-like protein JT727_09340 PF13998 MgrB protein JT727_09345 PF13974 YebO-like protein JT727_09350 PF10736 Protein of unknown function (DUF2627) JT727_09355 PF00313 'Cold-shock' DNA-binding domain JT727_09360 PF03717 Penicillin-binding Protein dimerisation domain JT727_09360 PF00905 Penicillin binding protein transpeptidase domain JT727_09365 PF13847 Methyltransferase domain JT727_09370 PF02659 Putative manganese efflux pump JT727_09375 PF06173 Protein of unknown function (DUF986) JT727_09380 PF03613 PTS system mannose/fructose/sorbose family IID component JT727_09385 PF03609 PTS system sorbose-specific iic component JT727_09390 PF03610 PTS system fructose IIA component JT727_09390 PF03830 PTS system sorbose subfamily IIB component JT727_09395 PF03741 Integral membrane protein TerC family JT727_09395 PF03471 Transporter associated domain JT727_09400 PF00563 EAL domain JT727_09400 PF12792 CSS motif domain associated with EAL JT727_09405 PF03313 Serine dehydratase alpha chain JT727_09405 PF03315 Serine dehydratase beta chain JT727_09410 PF00293 NUDIX domain JT727_09415 PF04715 Anthranilate synthase component I, N terminal region JT727_09415 PF00425 chorismate binding enzyme JT727_09420 PF03701 Uncharacterised protein family (UPF0181) JT727_09425 PF01042 Endoribonuclease L-PSP JT727_09430 PF13307 Helicase C-terminal domain JT727_09430 PF04851 Type III restriction enzyme, res subunit JT727_09435 PF00814 Glycoprotease family JT727_09440 PF03843 Outer membrane lipoprotein Slp family JT727_09445 PF00501 AMP-binding enzyme JT727_09445 PF13193 AMP-binding enzyme C-terminal domain JT727_09450 PF00570 HRDC domain JT727_09450 PF01612 3'-5' exonuclease JT727_09455 PF03776 Septum formation topological specificity factor MinE JT727_09460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JT727_09465 PF05209 Septum formation inhibitor MinC, N-terminal domain JT727_09465 PF03775 Septum formation inhibitor MinC, C-terminal domain JT727_09470 PF05166 YcgL domain JT727_09475 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT727_09480 PF03692 Putative zinc- or iron-chelating domain JT727_09490 PF02600 Disulfide bond formation protein DsbB JT727_09495 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JT727_09500 PF07840 FadR C-terminal domain JT727_09500 PF00392 Bacterial regulatory proteins, gntR family JT727_09505 PF04293 SpoVR like protein JT727_09515 PF01266 FAD dependent oxidoreductase JT727_09520 PF00842 Alanine racemase, C-terminal domain JT727_09520 PF01168 Alanine racemase, N-terminal domain JT727_09525 PF02080 TrkA-C domain JT727_09525 PF00999 Sodium/hydrogen exchanger family JT727_09525 PF03471 Transporter associated domain JT727_09530 PF17676 LD-carboxypeptidase C-terminal domain JT727_09530 PF02016 LD-carboxypeptidase N-terminal domain JT727_09535 PF01464 Transglycosylase SLT domain JT727_09540 PF07715 TonB-dependent Receptor Plug Domain JT727_09540 PF00593 TonB dependent receptor JT727_09545 PF01204 Trehalase JT727_09555 PF14403 Circularly permuted ATP-grasp type 2 JT727_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_09600 PF03466 LysR substrate binding domain JT727_09605 PF00291 Pyridoxal-phosphate dependent enzyme JT727_09610 PF03222 Tryptophan/tyrosine permease family JT727_09615 PF00871 Acetokinase family JT727_09620 PF02901 Pyruvate formate lyase-like JT727_09620 PF01228 Glycine radical JT727_09630 PF13458 Periplasmic binding protein JT727_09635 PF02653 Branched-chain amino acid transport system / permease component JT727_09640 PF02653 Branched-chain amino acid transport system / permease component JT727_09640 PF11862 Domain of unknown function (DUF3382) JT727_09645 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT727_09645 PF00005 ABC transporter JT727_09650 PF00005 ABC transporter JT727_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_09655 PF03466 LysR substrate binding domain JT727_09660 PF01293 Phosphoenolpyruvate carboxykinase JT727_09670 PF03466 LysR substrate binding domain JT727_09670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_09675 PF07690 Major Facilitator Superfamily JT727_09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_09685 PF03466 LysR substrate binding domain JT727_09695 PF00849 RNA pseudouridylate synthase JT727_09700 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JT727_09720 PF13488 Glycine zipper JT727_09720 PF00691 OmpA family JT727_09730 PF04717 Type VI secretion system, phage-baseplate injector JT727_09730 PF13296 Putative type VI secretion system Rhs element Vgr JT727_09730 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JT727_09765 PF03781 Sulfatase-modifying factor enzyme 1 JT727_09850 PF13407 Periplasmic binding protein domain JT727_09860 PF06071 Protein of unknown function (DUF933) JT727_09860 PF01926 50S ribosome-binding GTPase JT727_09865 PF01195 Peptidyl-tRNA hydrolase JT727_09870 PF10762 Protein of unknown function (DUF2583) JT727_09880 PF00916 Sulfate permease family JT727_09880 PF01740 STAS domain JT727_09885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JT727_09885 PF14572 Phosphoribosyl synthetase-associated domain JT727_09890 PF00288 GHMP kinases N terminal domain JT727_09890 PF08544 GHMP kinases C terminal JT727_09895 PF03550 Outer membrane lipoprotein LolB JT727_09900 PF01488 Shikimate / quinate 5-dehydrogenase JT727_09900 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JT727_09900 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JT727_09905 PF00472 RF-1 domain JT727_09905 PF03462 PCRF domain JT727_09910 PF17827 PrmC N-terminal domain JT727_09910 PF13847 Methyltransferase domain JT727_09915 PF04247 Invasion gene expression up-regulator, SirB JT727_09920 PF13369 Transglutaminase-like superfamily JT727_09925 PF00793 DAHP synthetase I family JT727_09930 PF01699 Sodium/calcium exchanger protein JT727_09935 PF06150 ChaB JT727_09940 PF04752 ChaC-like protein JT727_09950 PF02635 DsrE/DsrF-like family JT727_09955 PF08376 Nitrate and nitrite sensing JT727_09955 PF03861 ANTAR domain JT727_09965 PF00528 Binding-protein-dependent transport system inner membrane component JT727_09970 PF00005 ABC transporter JT727_09975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JT727_09975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JT727_09975 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_09975 PF04324 BFD-like [2Fe-2S] binding domain JT727_09975 PF18267 Rubredoxin NAD+ reductase C-terminal domain JT727_09975 PF13806 Rieske-like [2Fe-2S] domain JT727_09980 PF00384 Molybdopterin oxidoreductase JT727_09980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT727_09980 PF04324 BFD-like [2Fe-2S] binding domain JT727_09980 PF01568 Molydopterin dinucleotide binding domain JT727_09985 PF11924 Inverse autotransporter, beta-domain JT727_09990 PF00072 Response regulator receiver domain JT727_09990 PF00196 Bacterial regulatory proteins, luxR family JT727_09995 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JT727_09995 PF07730 Histidine kinase JT727_09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_09995 PF00672 HAMP domain JT727_10000 PF07690 Major Facilitator Superfamily JT727_10010 PF14710 Respiratory nitrate reductase alpha N-terminal JT727_10010 PF01568 Molydopterin dinucleotide binding domain JT727_10010 PF00384 Molybdopterin oxidoreductase JT727_10015 PF14711 Respiratory nitrate reductase beta C-terminal JT727_10015 PF13247 4Fe-4S dicluster domain JT727_10020 PF02613 Nitrate reductase delta subunit JT727_10025 PF02665 Nitrate reductase gamma subunit JT727_10035 PF01037 Lrp/AsnC ligand binding domain JT727_10070 PF00551 Formyl transferase JT727_10070 PF01842 ACT domain JT727_10075 PF02810 SEC-C motif JT727_10080 PF01734 Patatin-like phospholipase JT727_10085 PF00072 Response regulator receiver domain JT727_10090 PF00483 Nucleotidyl transferase JT727_10095 PF00816 H-NS histone family JT727_10105 PF00265 Thymidine kinase JT727_10110 PF00465 Iron-containing alcohol dehydrogenase JT727_10110 PF00171 Aldehyde dehydrogenase family JT727_10120 PF01914 MarC family integral membrane protein JT727_10125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_10130 PF00528 Binding-protein-dependent transport system inner membrane component JT727_10135 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_10135 PF00528 Binding-protein-dependent transport system inner membrane component JT727_10140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_10140 PF00005 ABC transporter JT727_10145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_10145 PF00005 ABC transporter JT727_10150 PF00027 Cyclic nucleotide-binding domain JT727_10150 PF00520 Ion transport protein JT727_10155 PF04269 Protein of unknown function, DUF440 JT727_10160 PF13396 Phospholipase_D-nuclease N-terminal JT727_10160 PF13091 PLD-like domain JT727_10170 PF04264 YceI-like domain JT727_10180 PF03795 YCII-related domain JT727_10185 PF03544 Gram-negative bacterial TonB protein C-terminal JT727_10190 PF03881 Fructosamine kinase JT727_10195 PF11080 Endoribonuclease GhoS JT727_10200 PF00294 pfkB family carbohydrate kinase JT727_10205 PF04338 Protein of unknown function, DUF481 JT727_10215 PF02824 TGS domain JT727_10215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JT727_10215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JT727_10215 PF03129 Anticodon binding domain JT727_10220 PF00707 Translation initiation factor IF-3, C-terminal domain JT727_10220 PF05198 Translation initiation factor IF-3, N-terminal domain JT727_10225 PF01632 Ribosomal protein L35 JT727_10230 PF00453 Ribosomal protein L20 JT727_10240 PF01409 tRNA synthetases class II core domain (F) JT727_10240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JT727_10245 PF01588 Putative tRNA binding domain JT727_10245 PF03147 Ferredoxin-fold anticodon binding domain JT727_10245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JT727_10245 PF03483 B3/4 domain JT727_10245 PF03484 tRNA synthetase B5 domain JT727_10250 PF00216 Bacterial DNA-binding protein JT727_10260 PF01266 FAD dependent oxidoreductase JT727_10265 PF03466 LysR substrate binding domain JT727_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_10275 PF01032 FecCD transport family JT727_10280 PF03180 NLPA lipoprotein JT727_10285 PF00255 Glutathione peroxidase JT727_10290 PF00005 ABC transporter JT727_10295 PF00877 NlpC/P60 family JT727_10300 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JT727_10305 PF10636 Hemin uptake protein hemP JT727_10310 PF00793 DAHP synthetase I family JT727_10315 PF03618 Kinase/pyrophosphorylase JT727_10325 PF02896 PEP-utilising enzyme, TIM barrel domain JT727_10325 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JT727_10325 PF00391 PEP-utilising enzyme, mobile domain JT727_10335 PF01594 AI-2E family transporter JT727_10340 PF13183 4Fe-4S dicluster domain JT727_10340 PF01565 FAD binding domain JT727_10340 PF02913 FAD linked oxidases, C-terminal domain JT727_10345 PF03061 Thioesterase superfamily JT727_10350 PF04226 Transglycosylase associated protein JT727_10365 PF08267 Cobalamin-independent synthase, N-terminal domain JT727_10365 PF01717 Cobalamin-independent synthase, Catalytic domain JT727_10370 PF07690 Major Facilitator Superfamily JT727_10375 PF00005 ABC transporter JT727_10380 PF01032 FecCD transport family JT727_10390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_10390 PF03466 LysR substrate binding domain JT727_10410 PF00873 AcrB/AcrD/AcrF family JT727_10415 PF01070 FMN-dependent dehydrogenase JT727_10420 PF00440 Bacterial regulatory proteins, tetR family JT727_10440 PF01521 Iron-sulphur cluster biosynthesis JT727_10445 PF01458 Uncharacterized protein family (UPF0051) JT727_10450 PF00005 ABC transporter JT727_10455 PF01458 Uncharacterized protein family (UPF0051) JT727_10460 PF00266 Aminotransferase class-V JT727_10465 PF02657 Fe-S metabolism associated domain JT727_10470 PF17969 L,D-transpeptidase C-terminal domain JT727_10470 PF01476 LysM domain JT727_10470 PF03734 L,D-transpeptidase catalytic domain JT727_10475 PF04728 Lipoprotein leucine-zipper JT727_10480 PF00224 Pyruvate kinase, barrel domain JT727_10480 PF02887 Pyruvate kinase, alpha/beta domain JT727_10495 PF10965 Protein of unknown function (DUF2767) JT727_10500 PF17926 Tetracyclin repressor-like, C-terminal domain JT727_10500 PF00440 Bacterial regulatory proteins, tetR family JT727_10505 PF01261 Xylose isomerase-like TIM barrel JT727_10505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT727_10510 PF07690 Major Facilitator Superfamily JT727_10515 PF08501 Shikimate dehydrogenase substrate binding domain JT727_10515 PF01488 Shikimate / quinate 5-dehydrogenase JT727_10515 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT727_10525 PF00005 ABC transporter JT727_10530 PF01032 FecCD transport family JT727_10535 PF01497 Periplasmic binding protein JT727_10540 PF09339 IclR helix-turn-helix domain JT727_10540 PF01614 Bacterial transcriptional regulator JT727_10545 PF01494 FAD binding domain JT727_10550 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT727_10555 PF12697 Alpha/beta hydrolase family JT727_10560 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT727_10565 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation JT727_10565 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT727_10570 PF07836 DmpG-like communication domain JT727_10570 PF00682 HMGL-like JT727_10575 PF07690 Major Facilitator Superfamily JT727_10580 PF02578 Multi-copper polyphenol oxidoreductase laccase JT727_10590 PF05995 Cysteine dioxygenase type I JT727_10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_10595 PF03466 LysR substrate binding domain JT727_10600 PF00296 Luciferase-like monooxygenase JT727_10620 PF00528 Binding-protein-dependent transport system inner membrane component JT727_10625 PF00005 ABC transporter JT727_10630 PF07715 TonB-dependent Receptor Plug Domain JT727_10635 PF00005 ABC transporter JT727_10640 PF01032 FecCD transport family JT727_10645 PF01032 FecCD transport family JT727_10660 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_10665 PF00528 Binding-protein-dependent transport system inner membrane component JT727_10670 PF00005 ABC transporter JT727_10685 PF07690 Major Facilitator Superfamily JT727_10710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT727_10710 PF01568 Molydopterin dinucleotide binding domain JT727_10710 PF00384 Molybdopterin oxidoreductase JT727_10715 PF02615 Malate/L-lactate dehydrogenase JT727_10725 PF00528 Binding-protein-dependent transport system inner membrane component JT727_10730 PF00005 ABC transporter JT727_10730 PF08402 TOBE domain JT727_10740 PF13618 Gluconate 2-dehydrogenase subunit 3 JT727_10745 PF05199 GMC oxidoreductase JT727_10745 PF00732 GMC oxidoreductase JT727_10750 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JT727_10750 PF00034 Cytochrome c JT727_10755 PF00005 ABC transporter JT727_10760 PF03379 CcmB protein JT727_10765 PF01578 Cytochrome C assembly protein JT727_10775 PF03100 CcmE JT727_10780 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JT727_10780 PF01578 Cytochrome C assembly protein JT727_10785 PF08534 Redoxin JT727_10790 PF03918 Cytochrome C biogenesis protein JT727_10800 PF12833 Helix-turn-helix domain JT727_10800 PF12852 Cupin JT727_10805 PF00248 Aldo/keto reductase family JT727_10825 PF00106 short chain dehydrogenase JT727_10830 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_10830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_10830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_10835 PF03306 Alpha-acetolactate decarboxylase JT727_10840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_10840 PF03466 LysR substrate binding domain JT727_10845 PF00106 short chain dehydrogenase JT727_10855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT727_10855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT727_10860 PF00108 Thiolase, N-terminal domain JT727_10860 PF02803 Thiolase, C-terminal domain JT727_10865 PF01144 Coenzyme A transferase JT727_10870 PF01144 Coenzyme A transferase JT727_10875 PF03466 LysR substrate binding domain JT727_10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_10900 PF01565 FAD binding domain JT727_10900 PF02913 FAD linked oxidases, C-terminal domain JT727_10905 PF00528 Binding-protein-dependent transport system inner membrane component JT727_10910 PF00005 ABC transporter JT727_10920 PF02633 Creatinine amidohydrolase JT727_10925 PF01042 Endoribonuclease L-PSP JT727_10930 PF07969 Amidohydrolase family JT727_10935 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_10935 PF00175 Oxidoreductase NAD-binding domain JT727_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_10940 PF03466 LysR substrate binding domain JT727_10950 PF01979 Amidohydrolase family JT727_10965 PF12852 Cupin JT727_10965 PF12833 Helix-turn-helix domain JT727_10990 PF00563 EAL domain JT727_10990 PF12792 CSS motif domain associated with EAL JT727_11000 PF00072 Response regulator receiver domain JT727_11000 PF00486 Transcriptional regulatory protein, C terminal JT727_11005 PF00672 HAMP domain JT727_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_11005 PF00512 His Kinase A (phospho-acceptor) domain JT727_11010 PF13533 Biotin-lipoyl like JT727_11015 PF00873 AcrB/AcrD/AcrF family JT727_11040 PF07690 Major Facilitator Superfamily JT727_11045 PF01261 Xylose isomerase-like TIM barrel JT727_11050 PF01418 Helix-turn-helix domain, rpiR family JT727_11050 PF01380 SIS domain JT727_11055 PF00294 pfkB family carbohydrate kinase JT727_11060 PF03466 LysR substrate binding domain JT727_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_11065 PF07690 Major Facilitator Superfamily JT727_11085 PF00005 ABC transporter JT727_11085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_11090 PF00005 ABC transporter JT727_11090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_11095 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11100 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_11115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT727_11120 PF08220 DeoR-like helix-turn-helix domain JT727_11120 PF00455 DeoR C terminal sensor domain JT727_11130 PF00484 Carbonic anhydrase JT727_11155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JT727_11155 PF00753 Metallo-beta-lactamase superfamily JT727_11155 PF10996 Beta-Casp domain JT727_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_11165 PF03466 LysR substrate binding domain JT727_11195 PF03641 Possible lysine decarboxylase JT727_11205 PF01554 MatE JT727_11210 PF00677 Lumazine binding domain JT727_11220 PF07690 Major Facilitator Superfamily JT727_11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_11225 PF03466 LysR substrate binding domain JT727_11230 PF00356 Bacterial regulatory proteins, lacI family JT727_11240 PF07690 Major Facilitator Superfamily JT727_11245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JT727_11245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JT727_11255 PF00877 NlpC/P60 family JT727_11260 PF00462 Glutaredoxin JT727_11265 PF00929 Exonuclease JT727_11270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT727_11275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT727_11280 PF16925 Tetracyclin repressor-like, C-terminal domain JT727_11280 PF00440 Bacterial regulatory proteins, tetR family JT727_11285 PF06945 Protein of unknown function (DUF1289) JT727_11290 PF00248 Aldo/keto reductase family JT727_11295 PF00080 Copper/zinc superoxide dismutase (SODC) JT727_11300 PF04632 Fusaric acid resistance protein family JT727_11305 PF00529 HlyD membrane-fusion protein of T1SS JT727_11305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_11310 PF07869 Protein of unknown function (DUF1656) JT727_11315 PF01047 MarR family JT727_11320 PF17158 Membrane-associated sensor, integral membrane domain JT727_11320 PF00990 Diguanylate cyclase, GGDEF domain JT727_11325 PF05433 Glycine zipper 2TM domain JT727_11330 PF03702 Anhydro-N-acetylmuramic acid kinase JT727_11335 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme JT727_11340 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JT727_11340 PF01243 Pyridoxamine 5'-phosphate oxidase JT727_11345 PF00579 tRNA synthetases class I (W and Y) JT727_11350 PF08543 Phosphomethylpyrimidine kinase JT727_11355 PF02798 Glutathione S-transferase, N-terminal domain JT727_11355 PF00043 Glutathione S-transferase, C-terminal domain JT727_11360 PF00854 POT family JT727_11365 PF10576 Iron-sulfur binding domain of endonuclease III JT727_11365 PF00633 Helix-hairpin-helix motif JT727_11365 PF00730 HhH-GPD superfamily base excision DNA repair protein JT727_11370 PF02508 Rnf-Nqr subunit, membrane protein JT727_11375 PF04205 FMN-binding domain JT727_11380 PF03116 NQR2, RnfD, RnfE family JT727_11385 PF10531 SLBB domain JT727_11385 PF13375 RnfC Barrel sandwich hybrid domain JT727_11385 PF12838 4Fe-4S dicluster domain JT727_11385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JT727_11390 PF04060 Putative Fe-S cluster JT727_11395 PF02508 Rnf-Nqr subunit, membrane protein JT727_11400 PF10754 Protein of unknown function (DUF2569) JT727_11405 PF05321 Haemolysin expression modulating protein JT727_11410 PF00232 Glycosyl hydrolase family 1 JT727_11420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_11420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_11425 PF00962 Adenosine/AMP deaminase JT727_11430 PF07690 Major Facilitator Superfamily JT727_11435 PF01638 HxlR-like helix-turn-helix JT727_11450 PF01292 Prokaryotic cytochrome b561 JT727_11455 PF02583 Metal-sensitive transcriptional repressor JT727_11460 PF08240 Alcohol dehydrogenase GroES-like domain JT727_11460 PF00107 Zinc-binding dehydrogenase JT727_11465 PF01011 PQQ enzyme repeat JT727_11470 PF03466 LysR substrate binding domain JT727_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_11475 PF00775 Dioxygenase JT727_11480 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JT727_11480 PF00775 Dioxygenase JT727_11485 PF07063 Domain of unknown function (DUF1338) JT727_11490 PF00135 Carboxylesterase family JT727_11495 PF08240 Alcohol dehydrogenase GroES-like domain JT727_11495 PF00107 Zinc-binding dehydrogenase JT727_11500 PF04349 Periplasmic glucan biosynthesis protein, MdoG JT727_11505 PF13302 Acetyltransferase (GNAT) domain JT727_11510 PF18836 Beta solenoid repeat from YDCK JT727_11515 PF03595 Voltage-dependent anion channel JT727_11520 PF03848 Tellurite resistance protein TehB JT727_11525 PF11769 Protein of unknown function (DUF3313) JT727_11535 PF12833 Helix-turn-helix domain JT727_11535 PF06445 GyrI-like small molecule binding domain JT727_11540 PF03594 Benzoate membrane transport protein JT727_11545 PF01381 Helix-turn-helix JT727_11545 PF07883 Cupin domain JT727_11555 PF01136 Peptidase family U32 JT727_11555 PF12392 Collagenase JT727_11575 PF02322 Cytochrome bd terminal oxidase subunit II JT727_11580 PF01654 Cytochrome bd terminal oxidase subunit I JT727_11585 PF00392 Bacterial regulatory proteins, gntR family JT727_11585 PF00155 Aminotransferase class I and II JT727_11590 PF13416 Bacterial extracellular solute-binding protein JT727_11595 PF00005 ABC transporter JT727_11595 PF08402 TOBE domain JT727_11600 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11605 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11610 PF00171 Aldehyde dehydrogenase family JT727_11635 PF10753 Toxin GhoT_OrtT JT727_11640 PF00561 alpha/beta hydrolase fold JT727_11640 PF00364 Biotin-requiring enzyme JT727_11645 PF00171 Aldehyde dehydrogenase family JT727_11650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_11655 PF10735 Protein of unknown function (DUF2526) JT727_11660 PF04657 Putative inner membrane exporter, YdcZ JT727_11665 PF00583 Acetyltransferase (GNAT) family JT727_11670 PF08671 Anti-repressor SinI JT727_11670 PF01381 Helix-turn-helix JT727_11675 PF16884 N-terminal domain of oxidoreductase JT727_11675 PF00107 Zinc-binding dehydrogenase JT727_11680 PF01156 Inosine-uridine preferring nucleoside hydrolase JT727_11690 PF04175 Protein of unknown function (DUF406) JT727_11695 PF01979 Amidohydrolase family JT727_11700 PF07715 TonB-dependent Receptor Plug Domain JT727_11700 PF00593 TonB dependent receptor JT727_11715 PF00324 Amino acid permease JT727_11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_11720 PF03466 LysR substrate binding domain JT727_11725 PF01202 Shikimate kinase JT727_11730 PF00296 Luciferase-like monooxygenase JT727_11735 PF07687 Peptidase dimerisation domain JT727_11735 PF01546 Peptidase family M20/M25/M40 JT727_11740 PF00296 Luciferase-like monooxygenase JT727_11745 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_11755 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11760 PF00005 ABC transporter JT727_11770 PF13417 Glutathione S-transferase, N-terminal domain JT727_11775 PF01361 Tautomerase enzyme JT727_11790 PF02264 LamB porin JT727_11790 PF11471 Maltoporin periplasmic N-terminal extension JT727_11805 PF12833 Helix-turn-helix domain JT727_11805 PF02311 AraC-like ligand binding domain JT727_11810 PF01613 Flavin reductase like domain JT727_11815 PF00005 ABC transporter JT727_11815 PF17912 MalK OB fold domain JT727_11825 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11830 PF00797 N-acetyltransferase JT727_11835 PF02665 Nitrate reductase gamma subunit JT727_11840 PF02613 Nitrate reductase delta subunit JT727_11845 PF14711 Respiratory nitrate reductase beta C-terminal JT727_11845 PF13247 4Fe-4S dicluster domain JT727_11850 PF00384 Molybdopterin oxidoreductase JT727_11850 PF01568 Molydopterin dinucleotide binding domain JT727_11850 PF14710 Respiratory nitrate reductase alpha N-terminal JT727_11855 PF07690 Major Facilitator Superfamily JT727_11865 PF07690 Major Facilitator Superfamily JT727_11870 PF09339 IclR helix-turn-helix domain JT727_11870 PF01614 Bacterial transcriptional regulator JT727_11875 PF13378 Enolase C-terminal domain-like JT727_11875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT727_11880 PF02426 Muconolactone delta-isomerase JT727_11885 PF00775 Dioxygenase JT727_11885 PF04444 Catechol dioxygenase N terminus JT727_11890 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JT727_11890 PF00355 Rieske [2Fe-2S] domain JT727_11895 PF00866 Ring hydroxylating beta subunit JT727_11900 PF00970 Oxidoreductase FAD-binding domain JT727_11900 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_11900 PF00175 Oxidoreductase NAD-binding domain JT727_11905 PF00106 short chain dehydrogenase JT727_11910 PF00892 EamA-like transporter family JT727_11920 PF09163 Formate dehydrogenase N, transmembrane JT727_11920 PF12800 4Fe-4S binding domain JT727_11920 PF13247 4Fe-4S dicluster domain JT727_11925 PF01292 Prokaryotic cytochrome b561 JT727_11940 PF03976 Polyphosphate kinase 2 (PPK2) JT727_11950 PF07690 Major Facilitator Superfamily JT727_11960 PF00296 Luciferase-like monooxygenase JT727_11965 PF00005 ABC transporter JT727_11965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_11970 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_11970 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11975 PF00528 Binding-protein-dependent transport system inner membrane component JT727_11980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_11985 PF00107 Zinc-binding dehydrogenase JT727_11985 PF08240 Alcohol dehydrogenase GroES-like domain JT727_11990 PF00719 Inorganic pyrophosphatase JT727_12000 PF12848 ABC transporter JT727_12000 PF00005 ABC transporter JT727_12010 PF03949 Malic enzyme, NAD binding domain JT727_12010 PF00390 Malic enzyme, N-terminal domain JT727_12020 PF08136 30S ribosomal protein subunit S22 family JT727_12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_12030 PF03466 LysR substrate binding domain JT727_12035 PF10820 Protein of unknown function (DUF2543) JT727_12045 PF10685 Stress-induced bacterial acidophilic repeat motif JT727_12055 PF05974 Domain of unknown function (DUF892) JT727_12065 PF00128 Alpha amylase, catalytic domain JT727_12065 PF16657 Maltogenic Amylase, C-terminal domain JT727_12070 PF00106 short chain dehydrogenase JT727_12075 PF04239 Protein of unknown function (DUF421) JT727_12085 PF04076 Bacterial OB fold (BOF) protein JT727_12095 PF02566 OsmC-like protein JT727_12115 PF01545 Cation efflux family JT727_12115 PF16916 Dimerisation domain of Zinc Transporter JT727_12120 PF01062 Bestrophin, RFP-TM, chloride channel JT727_12125 PF00384 Molybdopterin oxidoreductase JT727_12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_12130 PF03466 LysR substrate binding domain JT727_12135 PF02378 Phosphotransferase system, EIIC JT727_12160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_12165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT727_12170 PF00083 Sugar (and other) transporter JT727_12175 PF02308 MgtC family JT727_12180 PF03969 AFG1-like ATPase JT727_12185 PF00141 Peroxidase JT727_12195 PF03717 Penicillin-binding Protein dimerisation domain JT727_12195 PF00905 Penicillin binding protein transpeptidase domain JT727_12200 PF00117 Glutamine amidotransferase class-I JT727_12200 PF00958 GMP synthase C terminal domain JT727_12200 PF02540 NAD synthase JT727_12205 PF00675 Insulinase (Peptidase family M16) JT727_12210 PF13186 Iron-sulfur cluster-binding domain JT727_12210 PF04055 Radical SAM superfamily JT727_12215 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JT727_12220 PF03070 TENA/THI-4/PQQC family JT727_12225 PF12706 Beta-lactamase superfamily domain JT727_12230 PF08042 PqqA family JT727_12235 PF01244 Membrane dipeptidase (Peptidase family M19) JT727_12240 PF00561 alpha/beta hydrolase fold JT727_12245 PF00486 Transcriptional regulatory protein, C terminal JT727_12245 PF00072 Response regulator receiver domain JT727_12250 PF00512 His Kinase A (phospho-acceptor) domain JT727_12250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_12250 PF00672 HAMP domain JT727_12255 PF02683 Cytochrome C biogenesis protein transmembrane region JT727_12255 PF00578 AhpC/TSA family JT727_12255 PF17991 Thioredoxin like C-terminal domain JT727_12265 PF00282 Pyridoxal-dependent decarboxylase conserved domain JT727_12270 PF00202 Aminotransferase class-III JT727_12275 PF09084 NMT1/THI5 like JT727_12280 PF00528 Binding-protein-dependent transport system inner membrane component JT727_12285 PF00005 ABC transporter JT727_12290 PF03070 TENA/THI-4/PQQC family JT727_12305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_12305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_12315 PF00356 Bacterial regulatory proteins, lacI family JT727_12320 PF08448 PAS fold JT727_12320 PF00990 Diguanylate cyclase, GGDEF domain JT727_12340 PF01979 Amidohydrolase family JT727_12345 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JT727_12380 PF00561 alpha/beta hydrolase fold JT727_12385 PF00117 Glutamine amidotransferase class-I JT727_12390 PF12833 Helix-turn-helix domain JT727_12390 PF02311 AraC-like ligand binding domain JT727_12425 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT727_12425 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT727_12440 PF01425 Amidase JT727_12465 PF00528 Binding-protein-dependent transport system inner membrane component JT727_12470 PF00528 Binding-protein-dependent transport system inner membrane component JT727_12475 PF00005 ABC transporter JT727_12480 PF00266 Aminotransferase class-V JT727_12485 PF07687 Peptidase dimerisation domain JT727_12485 PF01546 Peptidase family M20/M25/M40 JT727_12490 PF03060 Nitronate monooxygenase JT727_12495 PF03466 LysR substrate binding domain JT727_12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_12505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT727_12510 PF13454 FAD-NAD(P)-binding JT727_12515 PF00083 Sugar (and other) transporter JT727_12515 PF07690 Major Facilitator Superfamily JT727_12530 PF00440 Bacterial regulatory proteins, tetR family JT727_12560 PF07690 Major Facilitator Superfamily JT727_12570 PF00356 Bacterial regulatory proteins, lacI family JT727_12575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_12585 PF03611 PTS system sugar-specific permease component JT727_12590 PF00834 Ribulose-phosphate 3 epimerase family JT727_12600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_12605 PF02378 Phosphotransferase system, EIIC JT727_12605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_12610 PF01810 LysE type translocator JT727_12615 PF04972 BON domain JT727_12615 PF01476 LysM domain JT727_12620 PF07690 Major Facilitator Superfamily JT727_12630 PF00512 His Kinase A (phospho-acceptor) domain JT727_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_12630 PF00672 HAMP domain JT727_12635 PF00072 Response regulator receiver domain JT727_12635 PF14532 Sigma-54 interaction domain JT727_12635 PF02954 Bacterial regulatory protein, Fis family JT727_12640 PF13673 Acetyltransferase (GNAT) domain JT727_12640 PF04229 GrpB protein JT727_12645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_12645 PF03466 LysR substrate binding domain JT727_12650 PF00248 Aldo/keto reductase family JT727_12655 PF00248 Aldo/keto reductase family JT727_12660 PF08450 SMP-30/Gluconolactonase/LRE-like region JT727_12665 PF00248 Aldo/keto reductase family JT727_12725 PF00263 Bacterial type II and III secretion system protein JT727_12725 PF03958 Bacterial type II/III secretion system short domain JT727_12725 PF03958 Bacterial type II/III secretion system short domain JT727_12725 PF00263 Bacterial type II and III secretion system protein JT727_12785 PF00263 Bacterial type II and III secretion system protein JT727_12785 PF03958 Bacterial type II/III secretion system short domain JT727_12785 PF03958 Bacterial type II/III secretion system short domain JT727_12785 PF00263 Bacterial type II and III secretion system protein JT727_12845 PF00263 Bacterial type II and III secretion system protein JT727_12845 PF03958 Bacterial type II/III secretion system short domain JT727_12845 PF00263 Bacterial type II and III secretion system protein JT727_12845 PF03958 Bacterial type II/III secretion system short domain JT727_12875 PF00155 Aminotransferase class I and II JT727_12880 PF03222 Tryptophan/tyrosine permease family JT727_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_12885 PF03466 LysR substrate binding domain JT727_12895 PF02322 Cytochrome bd terminal oxidase subunit II JT727_12900 PF01654 Cytochrome bd terminal oxidase subunit I JT727_12910 PF00085 Thioredoxin JT727_12915 PF00107 Zinc-binding dehydrogenase JT727_12915 PF08240 Alcohol dehydrogenase GroES-like domain JT727_12930 PF02627 Carboxymuconolactone decarboxylase family JT727_12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_12940 PF03466 LysR substrate binding domain JT727_12945 PF00501 AMP-binding enzyme JT727_12945 PF13193 AMP-binding enzyme C-terminal domain JT727_12950 PF01144 Coenzyme A transferase JT727_12960 PF02803 Thiolase, C-terminal domain JT727_12960 PF00108 Thiolase, N-terminal domain JT727_12965 PF07690 Major Facilitator Superfamily JT727_12970 PF08450 SMP-30/Gluconolactonase/LRE-like region JT727_12980 PF02595 Glycerate kinase family JT727_12985 PF05651 Putative sugar diacid recognition JT727_12985 PF17853 GGDEF-like domain JT727_12985 PF13556 PucR C-terminal helix-turn-helix domain JT727_12990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT727_12990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT727_12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_12995 PF03466 LysR substrate binding domain JT727_13005 PF00392 Bacterial regulatory proteins, gntR family JT727_13005 PF07729 FCD domain JT727_13010 PF02378 Phosphotransferase system, EIIC JT727_13010 PF00367 phosphotransferase system, EIIB JT727_13015 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT727_13015 PF02056 Family 4 glycosyl hydrolase JT727_13020 PF00083 Sugar (and other) transporter JT727_13025 PF00381 PTS HPr component phosphorylation site JT727_13025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_13040 PF00756 Putative esterase JT727_13045 PF00563 EAL domain JT727_13045 PF03707 Bacterial signalling protein N terminal repeat JT727_13045 PF00990 Diguanylate cyclase, GGDEF domain JT727_13045 PF13188 PAS domain JT727_13060 PF00557 Metallopeptidase family M24 JT727_13075 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_13075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_13080 PF13953 PapC C-terminal domain JT727_13080 PF13954 PapC N-terminal domain JT727_13080 PF00577 Outer membrane usher protein JT727_13090 PF02638 Glycosyl hydrolase-like 10 JT727_13095 PF13657 HipA N-terminal domain JT727_13095 PF07804 HipA-like C-terminal domain JT727_13100 PF01381 Helix-turn-helix JT727_13105 PF00576 HIUase/Transthyretin family JT727_13110 PF01014 Uricase JT727_13110 PF09349 OHCU decarboxylase JT727_13115 PF00860 Permease family JT727_13120 PF01494 FAD binding domain JT727_13125 PF03466 LysR substrate binding domain JT727_13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_13130 PF00355 Rieske [2Fe-2S] domain JT727_13135 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_13140 PF07690 Major Facilitator Superfamily JT727_13145 PF12833 Helix-turn-helix domain JT727_13160 PF09905 DNA-binding protein VF530 JT727_13170 PF03180 NLPA lipoprotein JT727_13175 PF00005 ABC transporter JT727_13175 PF09383 NIL domain JT727_13180 PF00528 Binding-protein-dependent transport system inner membrane component JT727_13185 PF03060 Nitronate monooxygenase JT727_13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_13190 PF03466 LysR substrate binding domain JT727_13195 PF06779 Uncharacterised MFS-type transporter YbfB JT727_13205 PF07690 Major Facilitator Superfamily JT727_13215 PF13649 Methyltransferase domain JT727_13250 PF00583 Acetyltransferase (GNAT) family JT727_13255 PF08125 Mannitol dehydrogenase C-terminal domain JT727_13255 PF01232 Mannitol dehydrogenase Rossmann domain JT727_13265 PF00990 Diguanylate cyclase, GGDEF domain JT727_13275 PF04960 Glutaminase JT727_13280 PF00171 Aldehyde dehydrogenase family JT727_13285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_13285 PF03466 LysR substrate binding domain JT727_13290 PF00583 Acetyltransferase (GNAT) family JT727_13295 PF00056 lactate/malate dehydrogenase, NAD binding domain JT727_13295 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JT727_13300 PF00455 DeoR C terminal sensor domain JT727_13300 PF08220 DeoR-like helix-turn-helix domain JT727_13305 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JT727_13310 PF07005 Sugar-binding N-terminal domain JT727_13310 PF17042 Nucleotide-binding C-terminal domain JT727_13315 PF00465 Iron-containing alcohol dehydrogenase JT727_13320 PF00701 Dihydrodipicolinate synthetase family JT727_13335 PF04074 YhcH/YjgK/YiaL JT727_13345 PF02567 Phenazine biosynthesis-like protein JT727_13350 PF07690 Major Facilitator Superfamily JT727_13355 PF01914 MarC family integral membrane protein JT727_13365 PF01047 MarR family JT727_13370 PF12833 Helix-turn-helix domain JT727_13375 PF13999 MarB protein JT727_13380 PF00892 EamA-like transporter family JT727_13385 PF07690 Major Facilitator Superfamily JT727_13395 PF00005 ABC transporter JT727_13400 PF00005 ABC transporter JT727_13400 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT727_13405 PF02653 Branched-chain amino acid transport system / permease component JT727_13410 PF02653 Branched-chain amino acid transport system / permease component JT727_13415 PF00158 Sigma-54 interaction domain JT727_13415 PF02954 Bacterial regulatory protein, Fis family JT727_13415 PF13188 PAS domain JT727_13420 PF01717 Cobalamin-independent synthase, Catalytic domain JT727_13430 PF12833 Helix-turn-helix domain JT727_13430 PF01965 DJ-1/PfpI family JT727_13445 PF00356 Bacterial regulatory proteins, lacI family JT727_13450 PF02837 Glycosyl hydrolases family 2, sugar binding domain JT727_13450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JT727_13450 PF02929 Beta galactosidase small chain JT727_13450 PF00703 Glycosyl hydrolases family 2 JT727_13450 PF16353 Domain of unknown function(DUF4981) JT727_13455 PF01306 LacY proton/sugar symporter JT727_13460 PF02463 RecF/RecN/SMC N terminal domain JT727_13475 PF00455 DeoR C terminal sensor domain JT727_13475 PF08220 DeoR-like helix-turn-helix domain JT727_13480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT727_13480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT727_13485 PF17042 Nucleotide-binding C-terminal domain JT727_13485 PF07005 Sugar-binding N-terminal domain JT727_13490 PF00596 Class II Aldolase and Adducin N-terminal domain JT727_13495 PF01261 Xylose isomerase-like TIM barrel JT727_13500 PF02447 GntP family permease JT727_13505 PF12833 Helix-turn-helix domain JT727_13520 PF00563 EAL domain JT727_13520 PF04940 Sensors of blue-light using FAD JT727_13525 PF02464 Competence-damaged protein JT727_13530 PF00011 Hsp20/alpha crystallin family JT727_13565 PF02586 SOS response associated peptidase (SRAP) JT727_13570 PF02311 AraC-like ligand binding domain JT727_13570 PF12833 Helix-turn-helix domain JT727_13580 PF01432 Peptidase family M3 JT727_13585 PF00106 short chain dehydrogenase JT727_13590 PF07729 FCD domain JT727_13590 PF00392 Bacterial regulatory proteins, gntR family JT727_13595 PF00582 Universal stress protein family JT727_13600 PF01232 Mannitol dehydrogenase Rossmann domain JT727_13600 PF08125 Mannitol dehydrogenase C-terminal domain JT727_13605 PF07690 Major Facilitator Superfamily JT727_13610 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JT727_13615 PF06932 Protein of unknown function (DUF1283) JT727_13620 PF13302 Acetyltransferase (GNAT) domain JT727_13625 PF06788 Uncharacterised protein family (UPF0257) JT727_13630 PF06649 Protein of unknown function (DUF1161) JT727_13635 PF00384 Molybdopterin oxidoreductase JT727_13635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT727_13635 PF01568 Molydopterin dinucleotide binding domain JT727_13640 PF12800 4Fe-4S binding domain JT727_13640 PF13247 4Fe-4S dicluster domain JT727_13645 PF04976 DMSO reductase anchor subunit (DmsC) JT727_13650 PF02613 Nitrate reductase delta subunit JT727_13655 PF00654 Voltage gated chloride channel JT727_13665 PF00480 ROK family JT727_13670 PF03466 LysR substrate binding domain JT727_13670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_13675 PF07690 Major Facilitator Superfamily JT727_13680 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JT727_13690 PF00089 Trypsin JT727_13700 PF00893 Small Multidrug Resistance protein JT727_13705 PF00893 Small Multidrug Resistance protein JT727_13710 PF01594 AI-2E family transporter JT727_13715 PF16957 Malonate decarboxylase, alpha subunit, transporter JT727_13720 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JT727_13725 PF06857 Malonate decarboxylase delta subunit (MdcD) JT727_13730 PF01039 Carboxyl transferase domain JT727_13740 PF03547 Membrane transport protein JT727_13745 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JT727_13750 PF00698 Acyl transferase domain JT727_13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_13755 PF03466 LysR substrate binding domain JT727_13770 PF06039 Malate:quinone oxidoreductase (Mqo) JT727_13775 PF13580 SIS domain JT727_13785 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JT727_13785 PF17203 Single cache domain 3 JT727_13785 PF00989 PAS fold JT727_13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_13790 PF00072 Response regulator receiver domain JT727_13795 PF02424 ApbE family JT727_13800 PF14537 Cytochrome c3 JT727_13800 PF00890 FAD binding domain JT727_13805 PF00939 Sodium:sulfate symporter transmembrane region JT727_13810 PF05681 Fumarate hydratase (Fumerase) JT727_13810 PF05683 Fumarase C-terminus JT727_13820 PF02627 Carboxymuconolactone decarboxylase family JT727_13825 PF12146 Serine aminopeptidase, S33 JT727_13830 PF00206 Lyase JT727_13830 PF10397 Adenylosuccinate lyase C-terminus JT727_13835 PF02803 Thiolase, C-terminal domain JT727_13835 PF00108 Thiolase, N-terminal domain JT727_13840 PF01144 Coenzyme A transferase JT727_13845 PF01144 Coenzyme A transferase JT727_13850 PF09339 IclR helix-turn-helix domain JT727_13850 PF01614 Bacterial transcriptional regulator JT727_13855 PF01713 Smr domain JT727_13860 PF03466 LysR substrate binding domain JT727_13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_13865 PF01546 Peptidase family M20/M25/M40 JT727_13865 PF07687 Peptidase dimerisation domain JT727_13870 PF01546 Peptidase family M20/M25/M40 JT727_13875 PF03806 AbgT putative transporter family JT727_13885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JT727_13885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JT727_13890 PF00027 Cyclic nucleotide-binding domain JT727_13890 PF00325 Bacterial regulatory proteins, crp family JT727_13895 PF00582 Universal stress protein family JT727_13900 PF15930 Domain of unknown function JT727_13905 PF02233 NAD(P) transhydrogenase beta subunit JT727_13910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JT727_13910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JT727_13910 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JT727_13920 PF07338 Protein of unknown function (DUF1471) JT727_13925 PF13520 Amino acid permease JT727_13935 PF06942 GlpM protein JT727_13940 PF00486 Transcriptional regulatory protein, C terminal JT727_13940 PF00072 Response regulator receiver domain JT727_13950 PF00512 His Kinase A (phospho-acceptor) domain JT727_13950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_13950 PF00672 HAMP domain JT727_13955 PF05472 DNA replication terminus site-binding protein (Ter protein) JT727_13960 PF10415 Fumarase C C-terminus JT727_13960 PF00206 Lyase JT727_13965 PF05683 Fumarase C-terminus JT727_13965 PF05681 Fumarate hydratase (Fumerase) JT727_13970 PF01238 Phosphomannose isomerase type I JT727_13975 PF06097 Bacterial protein of unknown function (DUF945) JT727_13980 PF00356 Bacterial regulatory proteins, lacI family JT727_13980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT727_13985 PF02378 Phosphotransferase system, EIIC JT727_13985 PF00367 phosphotransferase system, EIIB JT727_13990 PF00155 Aminotransferase class I and II JT727_14000 PF14001 YdfZ protein JT727_14015 PF04143 Sulphur transport JT727_14020 PF01206 Sulfurtransferase TusA JT727_14025 PF07166 Protein of unknown function (DUF1398) JT727_14030 PF01679 Proteolipid membrane potential modulator JT727_14035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JT727_14035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JT727_14040 PF00171 Aldehyde dehydrogenase family JT727_14050 PF02698 DUF218 domain JT727_14055 PF00083 Sugar (and other) transporter JT727_14055 PF07690 Major Facilitator Superfamily JT727_14060 PF00324 Amino acid permease JT727_14065 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JT727_14070 PF04996 Succinylarginine dihydrolase JT727_14075 PF00171 Aldehyde dehydrogenase family JT727_14080 PF04958 Arginine N-succinyltransferase beta subunit JT727_14085 PF00202 Aminotransferase class-III JT727_14095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JT727_14095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JT727_14100 PF00248 Aldo/keto reductase family JT727_14105 PF03466 LysR substrate binding domain JT727_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_14120 PF13533 Biotin-lipoyl like JT727_14125 PF02321 Outer membrane efflux protein JT727_14130 PF01596 O-methyltransferase JT727_14135 PF00271 Helicase conserved C-terminal domain JT727_14135 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JT727_14135 PF04408 Helicase associated domain (HA2) JT727_14135 PF11898 Domain of unknown function (DUF3418) JT727_14135 PF00270 DEAD/DEAH box helicase JT727_14140 PF02525 Flavodoxin-like fold JT727_14150 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_14155 PF08223 PaaX-like protein C-terminal domain JT727_14155 PF07848 PaaX-like protein JT727_14160 PF00501 AMP-binding enzyme JT727_14160 PF14535 AMP-binding enzyme C-terminal domain JT727_14165 PF00108 Thiolase, N-terminal domain JT727_14165 PF02803 Thiolase, C-terminal domain JT727_14170 PF03061 Thioesterase superfamily JT727_14175 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JT727_14175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT727_14175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT727_14180 PF00378 Enoyl-CoA hydratase/isomerase JT727_14185 PF00378 Enoyl-CoA hydratase/isomerase JT727_14190 PF00175 Oxidoreductase NAD-binding domain JT727_14190 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_14190 PF00970 Oxidoreductase FAD-binding domain JT727_14195 PF01883 Iron-sulfur cluster assembly protein JT727_14200 PF05138 Phenylacetic acid catabolic protein JT727_14205 PF06243 Phenylacetic acid degradation B JT727_14210 PF05138 Phenylacetic acid catabolic protein JT727_14215 PF00171 Aldehyde dehydrogenase family JT727_14215 PF01575 MaoC like domain JT727_14220 PF02728 Copper amine oxidase, N3 domain JT727_14220 PF02727 Copper amine oxidase, N2 domain JT727_14220 PF01179 Copper amine oxidase, enzyme domain JT727_14220 PF07833 Copper amine oxidase N-terminal domain JT727_14230 PF02558 Ketopantoate reductase PanE/ApbA JT727_14230 PF08546 Ketopantoate reductase PanE/ApbA C terminal JT727_14235 PF00171 Aldehyde dehydrogenase family JT727_14240 PF12833 Helix-turn-helix domain JT727_14240 PF14525 AraC-binding-like domain JT727_14245 PF07027 Protein of unknown function (DUF1318) JT727_14250 PF13617 YnbE-like lipoprotein JT727_14255 PF11739 Dicarboxylate transport JT727_14260 PF09335 SNARE associated Golgi protein JT727_14265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT727_14265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT727_14270 PF03724 META domain JT727_14275 PF03891 Domain of unknown function (DUF333) JT727_14280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_14280 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JT727_14280 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JT727_14280 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JT727_14280 PF10371 Domain of unknown function JT727_14285 PF00267 Gram-negative porin JT727_14295 PF00582 Universal stress protein family JT727_14300 PF01171 PP-loop family JT727_14305 PF00271 Helicase conserved C-terminal domain JT727_14305 PF00270 DEAD/DEAH box helicase JT727_14305 PF03880 DbpA RNA binding domain JT727_14310 PF01544 CorA-like Mg2+ transporter protein JT727_14315 PF00455 DeoR C terminal sensor domain JT727_14315 PF08220 DeoR-like helix-turn-helix domain JT727_14320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_14320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_14335 PF00324 Amino acid permease JT727_14340 PF01037 Lrp/AsnC ligand binding domain JT727_14350 PF00155 Aminotransferase class I and II JT727_14355 PF00528 Binding-protein-dependent transport system inner membrane component JT727_14360 PF09383 NIL domain JT727_14360 PF00005 ABC transporter JT727_14365 PF03180 NLPA lipoprotein JT727_14370 PF00155 Aminotransferase class I and II JT727_14375 PF00107 Zinc-binding dehydrogenase JT727_14375 PF08240 Alcohol dehydrogenase GroES-like domain JT727_14380 PF00440 Bacterial regulatory proteins, tetR family JT727_14390 PF00753 Metallo-beta-lactamase superfamily JT727_14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_14405 PF03466 LysR substrate binding domain JT727_14430 PF00440 Bacterial regulatory proteins, tetR family JT727_14530 PF04717 Type VI secretion system, phage-baseplate injector JT727_14530 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JT727_14530 PF13296 Putative type VI secretion system Rhs element Vgr JT727_14535 PF00004 ATPase family associated with various cellular activities (AAA) JT727_14535 PF07724 AAA domain (Cdc48 subfamily) JT727_14535 PF17871 AAA lid domain JT727_14535 PF10431 C-terminal, D2-small domain, of ClpB protein JT727_14545 PF13488 Glycine zipper JT727_14545 PF00691 OmpA family JT727_14560 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JT727_14570 PF01965 DJ-1/PfpI family JT727_14575 PF01966 HD domain JT727_14585 PF03466 LysR substrate binding domain JT727_14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_14605 PF00072 Response regulator receiver domain JT727_14605 PF00990 Diguanylate cyclase, GGDEF domain JT727_14620 PF07238 PilZ domain JT727_14620 PF03170 Bacterial cellulose synthase subunit JT727_14620 PF00535 Glycosyl transferase family 2 JT727_14645 PF00672 HAMP domain JT727_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_14645 PF00512 His Kinase A (phospho-acceptor) domain JT727_14645 PF01627 Hpt domain JT727_14645 PF00072 Response regulator receiver domain JT727_14645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JT727_14650 PF16355 Domain of unknown function (DUF4982) JT727_14650 PF02837 Glycosyl hydrolases family 2, sugar binding domain JT727_14650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JT727_14650 PF00703 Glycosyl hydrolases family 2 JT727_14655 PF00248 Aldo/keto reductase family JT727_14660 PF07690 Major Facilitator Superfamily JT727_14665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JT727_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_14670 PF03466 LysR substrate binding domain JT727_14685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_14695 PF00246 Zinc carboxypeptidase JT727_14700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT727_14700 PF13378 Enolase C-terminal domain-like JT727_14705 PF08534 Redoxin JT727_14710 PF05145 Transition state regulatory protein AbrB JT727_14715 PF00158 Sigma-54 interaction domain JT727_14715 PF18024 Helix-turn-helix domain JT727_14720 PF02056 Family 4 glycosyl hydrolase JT727_14720 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT727_14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_14725 PF03466 LysR substrate binding domain JT727_14730 PF05128 Domain of unknown function (DUF697) JT727_14735 PF04317 YcjX-like family, DUF463 JT727_14740 PF09584 Phage shock protein PspD (Phageshock_PspD) JT727_14745 PF04024 PspC domain JT727_14750 PF06667 Phage shock protein B JT727_14755 PF04012 PspA/IM30 family JT727_14760 PF00158 Sigma-54 interaction domain JT727_14760 PF02954 Bacterial regulatory protein, Fis family JT727_14765 PF07690 Major Facilitator Superfamily JT727_14770 PF07687 Peptidase dimerisation domain JT727_14770 PF01546 Peptidase family M20/M25/M40 JT727_14775 PF12833 Helix-turn-helix domain JT727_14785 PF13460 NAD(P)H-binding JT727_14790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_14795 PF00528 Binding-protein-dependent transport system inner membrane component JT727_14800 PF00528 Binding-protein-dependent transport system inner membrane component JT727_14800 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_14805 PF00005 ABC transporter JT727_14805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_14810 PF00005 ABC transporter JT727_14815 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JT727_14820 PF05962 HutD JT727_14835 PF00773 RNB domain JT727_14835 PF17876 Cold shock domain JT727_14835 PF00575 S1 RNA binding domain JT727_14835 PF08206 Ribonuclease B OB domain JT727_14845 PF00455 DeoR C terminal sensor domain JT727_14845 PF08220 DeoR-like helix-turn-helix domain JT727_14850 PF05433 Glycine zipper 2TM domain JT727_14855 PF01253 Translation initiation factor SUI1 JT727_14860 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JT727_14865 PF18073 Rubredoxin metal binding domain JT727_14870 PF06305 Lipopolysaccharide assembly protein A domain JT727_14875 PF01569 PAP2 superfamily JT727_14880 PF00925 GTP cyclohydrolase II JT727_14885 PF00330 Aconitase family (aconitate hydratase) JT727_14885 PF00694 Aconitase C-terminal domain JT727_14895 PF03466 LysR substrate binding domain JT727_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_14900 PF08272 Topoisomerase I zinc-ribbon-like JT727_14900 PF01751 Toprim domain JT727_14900 PF01131 DNA topoisomerase JT727_14900 PF01396 Topoisomerase DNA binding C4 zinc finger JT727_14905 PF10692 Protein of unknown function (DUF2498) JT727_14920 PF00106 short chain dehydrogenase JT727_14925 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JT727_14925 PF12557 Cob(I)alamin adenosyltransferase N terminal JT727_14930 PF01479 S4 domain JT727_14930 PF00849 RNA pseudouridylate synthase JT727_14950 PF03466 LysR substrate binding domain JT727_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_14960 PF01300 Telomere recombination JT727_14965 PF02811 PHP domain JT727_14970 PF00425 chorismate binding enzyme JT727_14970 PF04715 Anthranilate synthase component I, N terminal region JT727_14975 PF00117 Glutamine amidotransferase class-I JT727_14975 PF00591 Glycosyl transferase family, a/b domain JT727_14975 PF02885 Glycosyl transferase family, helical bundle domain JT727_14980 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JT727_14980 PF00218 Indole-3-glycerol phosphate synthase JT727_14985 PF00291 Pyridoxal-phosphate dependent enzyme JT727_14990 PF00290 Tryptophan synthase alpha chain JT727_15005 PF07715 TonB-dependent Receptor Plug Domain JT727_15005 PF00593 TonB dependent receptor JT727_15010 PF18331 PKHD-type hydroxylase C-terminal domain JT727_15010 PF13640 2OG-Fe(II) oxygenase superfamily JT727_15015 PF03922 OmpW family JT727_15020 PF03692 Putative zinc- or iron-chelating domain JT727_15030 PF04279 Intracellular septation protein A JT727_15035 PF07715 TonB-dependent Receptor Plug Domain JT727_15035 PF00593 TonB dependent receptor JT727_15040 PF03061 Thioesterase superfamily JT727_15045 PF14002 YniB-like protein JT727_15050 PF13419 Haloacid dehalogenase-like hydrolase JT727_15060 PF04307 LexA-binding, inner membrane-associated putative hydrolase JT727_15065 PF00375 Sodium:dicarboxylate symporter family JT727_15070 PF10729 Cell division activator CedA JT727_15075 PF06628 Catalase-related immune-responsive JT727_15075 PF00199 Catalase JT727_15075 PF18011 C-terminal domain found in long catalases JT727_15080 PF04794 YdjC-like protein JT727_15085 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT727_15085 PF02056 Family 4 glycosyl hydrolase JT727_15090 PF12833 Helix-turn-helix domain JT727_15090 PF07883 Cupin domain JT727_15095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT727_15100 PF02378 Phosphotransferase system, EIIC JT727_15110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_15115 PF04355 SmpA / OmlA family JT727_15120 PF02540 NAD synthase JT727_15130 PF07813 LTXXQ motif family protein JT727_15135 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JT727_15140 PF04996 Succinylarginine dihydrolase JT727_15145 PF00171 Aldehyde dehydrogenase family JT727_15150 PF04958 Arginine N-succinyltransferase beta subunit JT727_15155 PF00202 Aminotransferase class-III JT727_15160 PF03372 Endonuclease/Exonuclease/phosphatase family JT727_15165 PF09335 SNARE associated Golgi protein JT727_15170 PF09335 SNARE associated Golgi protein JT727_15175 PF02627 Carboxymuconolactone decarboxylase family JT727_15180 PF13416 Bacterial extracellular solute-binding protein JT727_15185 PF00528 Binding-protein-dependent transport system inner membrane component JT727_15190 PF00005 ABC transporter JT727_15195 PF00581 Rhodanese-like domain JT727_15200 PF01066 CDP-alcohol phosphatidyltransferase JT727_15205 PF00293 NUDIX domain JT727_15210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JT727_15210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JT727_15215 PF08240 Alcohol dehydrogenase GroES-like domain JT727_15215 PF14765 Polyketide synthase dehydratase JT727_15215 PF00698 Acyl transferase domain JT727_15215 PF02801 Beta-ketoacyl synthase, C-terminal domain JT727_15215 PF00550 Phosphopantetheine attachment site JT727_15215 PF16197 Ketoacyl-synthetase C-terminal extension JT727_15215 PF08659 KR domain JT727_15215 PF00109 Beta-ketoacyl synthase, N-terminal domain JT727_15220 PF01751 Toprim domain JT727_15220 PF01131 DNA topoisomerase JT727_15225 PF02769 AIR synthase related protein, C-terminal domain JT727_15225 PF00586 AIR synthase related protein, N-terminal domain JT727_15230 PF01569 PAP2 superfamily JT727_15235 PF00881 Nitroreductase family JT727_15240 PF01343 Peptidase family S49 JT727_15245 PF17763 Glutaminase/Asparaginase C-terminal domain JT727_15245 PF00710 Asparaginase, N-terminal JT727_15250 PF00857 Isochorismatase family JT727_15255 PF00704 Glycosyl hydrolases family 18 JT727_15255 PF00041 Fibronectin type III domain JT727_15260 PF01844 HNH endonuclease JT727_15265 PF07023 Protein of unknown function (DUF1315) JT727_15270 PF01641 SelR domain JT727_15275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JT727_15275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JT727_15280 PF01263 Aldose 1-epimerase JT727_15285 PF00248 Aldo/keto reductase family JT727_15290 PF06629 MltA-interacting protein MipA JT727_15295 PF06798 PrkA serine protein kinase C-terminal domain JT727_15295 PF08298 PrkA AAA domain JT727_15300 PF04285 Protein of unknown function (DUF444) JT727_15310 PF00255 Glutathione peroxidase JT727_15325 PF03466 LysR substrate binding domain JT727_15325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_15330 PF07690 Major Facilitator Superfamily JT727_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_15340 PF03466 LysR substrate binding domain JT727_15345 PF11798 IMS family HHH motif JT727_15345 PF11799 impB/mucB/samB family C-terminal domain JT727_15345 PF13438 Domain of unknown function (DUF4113) JT727_15345 PF00817 impB/mucB/samB family JT727_15350 PF00717 Peptidase S24-like JT727_15355 PF06183 DinI-like family JT727_15360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT727_15365 PF04073 Aminoacyl-tRNA editing domain JT727_15370 PF04284 Protein of unknown function (DUF441) JT727_15375 PF12833 Helix-turn-helix domain JT727_15375 PF02311 AraC-like ligand binding domain JT727_15380 PF07690 Major Facilitator Superfamily JT727_15385 PF00117 Glutamine amidotransferase class-I JT727_15385 PF06418 CTP synthase N-terminus JT727_15390 PF04463 Protein of unknown function (DUF523) JT727_15395 PF04343 Protein of unknown function, DUF488 JT727_15400 PF03891 Domain of unknown function (DUF333) JT727_15405 PF00990 Diguanylate cyclase, GGDEF domain JT727_15405 PF13185 GAF domain JT727_15425 PF10749 Protein of unknown function (DUF2534) JT727_15430 PF01810 LysE type translocator JT727_15435 PF03279 Bacterial lipid A biosynthesis acyltransferase JT727_15440 PF00710 Asparaginase, N-terminal JT727_15440 PF17763 Glutaminase/Asparaginase C-terminal domain JT727_15445 PF01966 HD domain JT727_15450 PF00990 Diguanylate cyclase, GGDEF domain JT727_15455 PF03466 LysR substrate binding domain JT727_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_15460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JT727_15490 PF02322 Cytochrome bd terminal oxidase subunit II JT727_15495 PF01654 Cytochrome bd terminal oxidase subunit I JT727_15500 PF05067 Manganese containing catalase JT727_15505 PF05974 Domain of unknown function (DUF892) JT727_15510 PF05974 Domain of unknown function (DUF892) JT727_15515 PF10685 Stress-induced bacterial acidophilic repeat motif JT727_15520 PF00107 Zinc-binding dehydrogenase JT727_15520 PF13823 Alcohol dehydrogenase GroES-associated JT727_15520 PF08240 Alcohol dehydrogenase GroES-like domain JT727_15525 PF06906 Protein of unknown function (DUF1272) JT727_15550 PF00180 Isocitrate/isopropylmalate dehydrogenase JT727_15620 PF06791 Prophage tail length tape measure protein JT727_15665 PF00574 Clp protease JT727_15750 PF06147 Protein of unknown function (DUF968) JT727_15755 PF05866 Endodeoxyribonuclease RusA JT727_15760 PF02086 D12 class N6 adenine-specific DNA methyltransferase JT727_15850 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain JT727_15850 PF00589 Phage integrase family JT727_15855 PF00180 Isocitrate/isopropylmalate dehydrogenase JT727_15860 PF00849 RNA pseudouridylate synthase JT727_15865 PF00293 NUDIX domain JT727_15875 PF04356 Protein of unknown function (DUF489) JT727_15880 PF00206 Lyase JT727_15880 PF08328 Adenylosuccinate lyase C-terminal JT727_15895 PF00072 Response regulator receiver domain JT727_15895 PF00486 Transcriptional regulatory protein, C terminal JT727_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_15900 PF08918 PhoQ Sensor JT727_15905 PF08007 Cupin superfamily protein JT727_15910 PF07687 Peptidase dimerisation domain JT727_15910 PF01546 Peptidase family M20/M25/M40 JT727_15915 PF00005 ABC transporter JT727_15915 PF08402 TOBE domain JT727_15920 PF00528 Binding-protein-dependent transport system inner membrane component JT727_15925 PF00528 Binding-protein-dependent transport system inner membrane component JT727_15930 PF13416 Bacterial extracellular solute-binding protein JT727_15940 PF00501 AMP-binding enzyme JT727_15940 PF13193 AMP-binding enzyme C-terminal domain JT727_15945 PF02780 Transketolase, C-terminal domain JT727_15945 PF02779 Transketolase, pyrimidine binding domain JT727_15945 PF00456 Transketolase, thiamine diphosphate binding domain JT727_15950 PF00923 Transaldolase/Fructose-6-phosphate aldolase JT727_15955 PF02502 Ribose/Galactose Isomerase JT727_15960 PF03829 PTS system glucitol/sorbitol-specific IIA component JT727_15965 PF03812 2-keto-3-deoxygluconate permease JT727_15970 PF07005 Sugar-binding N-terminal domain JT727_15970 PF17042 Nucleotide-binding C-terminal domain JT727_15975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JT727_15980 PF00121 Triosephosphate isomerase JT727_15985 PF04198 Putative sugar-binding domain JT727_15995 PF02146 Sir2 family JT727_16000 PF00480 ROK family JT727_16005 PF12704 MacB-like periplasmic core domain JT727_16005 PF02687 FtsX-like permease family JT727_16010 PF00005 ABC transporter JT727_16015 PF12704 MacB-like periplasmic core domain JT727_16015 PF02687 FtsX-like permease family JT727_16025 PF02559 CarD-like/TRCF domain JT727_16025 PF03461 TRCF domain JT727_16025 PF00271 Helicase conserved C-terminal domain JT727_16025 PF17757 UvrB interaction domain JT727_16025 PF00270 DEAD/DEAH box helicase JT727_16030 PF03734 L,D-transpeptidase catalytic domain JT727_16030 PF17969 L,D-transpeptidase C-terminal domain JT727_16030 PF01476 LysM domain JT727_16035 PF07338 Protein of unknown function (DUF1471) JT727_16045 PF00440 Bacterial regulatory proteins, tetR family JT727_16055 PF00593 TonB dependent receptor JT727_16055 PF07715 TonB-dependent Receptor Plug Domain JT727_16060 PF05433 Glycine zipper 2TM domain JT727_16065 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_16070 PF05728 Uncharacterised protein family (UPF0227) JT727_16075 PF00933 Glycosyl hydrolase family 3 N terminal domain JT727_16080 PF01636 Phosphotransferase enzyme family JT727_16085 PF13036 Peptidoglycan-synthase activator LpoB JT727_16090 PF07233 Protein of unknown function (DUF1425) JT727_16095 PF01230 HIT domain JT727_16100 PF02378 Phosphotransferase system, EIIC JT727_16100 PF00367 phosphotransferase system, EIIB JT727_16105 PF01026 TatD related DNase JT727_16110 PF09115 DNA polymerase III, delta subunit, C terminal JT727_16115 PF02223 Thymidylate kinase JT727_16120 PF02618 YceG-like family JT727_16125 PF01063 Amino-transferase class IV JT727_16130 PF00109 Beta-ketoacyl synthase, N-terminal domain JT727_16130 PF02801 Beta-ketoacyl synthase, C-terminal domain JT727_16135 PF00550 Phosphopantetheine attachment site JT727_16145 PF00698 Acyl transferase domain JT727_16150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JT727_16150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JT727_16155 PF02504 Fatty acid synthesis protein JT727_16160 PF01783 Ribosomal L32p protein family JT727_16165 PF02620 Large ribosomal RNA subunit accumulation protein YceD JT727_16170 PF02545 Maf-like protein JT727_16175 PF00849 RNA pseudouridylate synthase JT727_16175 PF01479 S4 domain JT727_16185 PF10150 Ribonuclease E/G family JT727_16185 PF00575 S1 RNA binding domain JT727_16185 PF12111 Polyribonucleotide phosphorylase C terminal JT727_16195 PF07690 Major Facilitator Superfamily JT727_16200 PF03023 Lipid II flippase MurJ JT727_16205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_16210 PF04337 Protein of unknown function, DUF480 JT727_16215 PF13302 Acetyltransferase (GNAT) domain JT727_16220 PF07690 Major Facilitator Superfamily JT727_16225 PF07273 Protein of unknown function (DUF1439) JT727_16230 PF01979 Amidohydrolase family JT727_16235 PF06183 DinI-like family JT727_16240 PF13991 BssS protein family JT727_16245 PF01266 FAD dependent oxidoreductase JT727_16250 PF10968 Protein of unknown function (DUF2770) JT727_16255 PF00581 Rhodanese-like domain JT727_16255 PF17773 UPF0176 acylphosphatase like domain JT727_16255 PF12368 Rhodanase C-terminal JT727_16260 PF03279 Bacterial lipid A biosynthesis acyltransferase JT727_16265 PF07690 Major Facilitator Superfamily JT727_16270 PF13984 MsyB protein JT727_16275 PF07119 Protein of unknown function (DUF1375) JT727_16280 PF00535 Glycosyl transferase family 2 JT727_16285 PF04349 Periplasmic glucan biosynthesis protein, MdoG JT727_16290 PF01757 Acyltransferase family JT727_16295 PF13977 BetI-type transcriptional repressor, C-terminal JT727_16295 PF00440 Bacterial regulatory proteins, tetR family JT727_16300 PF01661 Macro domain JT727_16305 PF06496 Protein of unknown function (DUF1097) JT727_16310 PF02613 Nitrate reductase delta subunit JT727_16315 PF02811 PHP domain JT727_16320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT727_16335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_16335 PF03466 LysR substrate binding domain JT727_16340 PF02678 Pirin JT727_16340 PF05726 Pirin C-terminal cupin domain JT727_16345 PF00857 Isochorismatase family JT727_16360 PF01323 DSBA-like thioredoxin domain JT727_16365 PF02562 PhoH-like protein JT727_16370 PF04261 Dyp-type peroxidase family JT727_16375 PF09375 Imelysin JT727_16375 PF13473 Cupredoxin-like domain JT727_16380 PF03239 Iron permease FTR1 family JT727_16385 PF07662 Na+ dependent nucleoside transporter C-terminus JT727_16385 PF01773 Na+ dependent nucleoside transporter N-terminus JT727_16385 PF07670 Nucleoside recognition JT727_16395 PF00474 Sodium:solute symporter family JT727_16400 PF00171 Aldehyde dehydrogenase family JT727_16400 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JT727_16400 PF14850 DNA-binding domain of Proline dehydrogenase JT727_16400 PF01619 Proline dehydrogenase JT727_16410 PF00440 Bacterial regulatory proteins, tetR family JT727_16410 PF08362 YcdC-like protein, C-terminal region JT727_16415 PF00296 Luciferase-like monooxygenase JT727_16420 PF00857 Isochorismatase family JT727_16425 PF01042 Endoribonuclease L-PSP JT727_16430 PF00561 alpha/beta hydrolase fold JT727_16435 PF00881 Nitroreductase family JT727_16440 PF01613 Flavin reductase like domain JT727_16445 PF00860 Permease family JT727_16455 PF10685 Stress-induced bacterial acidophilic repeat motif JT727_16465 PF03358 NADPH-dependent FMN reductase JT727_16470 PF13993 YccJ-like protein JT727_16475 PF00328 Histidine phosphatase superfamily (branch 2) JT727_16480 PF01638 HxlR-like helix-turn-helix JT727_16500 PF00324 Amino acid permease JT727_16505 PF00120 Glutamine synthetase, catalytic domain JT727_16510 PF07722 Peptidase C26 JT727_16515 PF01381 Helix-turn-helix JT727_16515 PF07883 Cupin domain JT727_16520 PF00171 Aldehyde dehydrogenase family JT727_16525 PF01266 FAD dependent oxidoreductase JT727_16530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_16530 PF03466 LysR substrate binding domain JT727_16535 PF00180 Isocitrate/isopropylmalate dehydrogenase JT727_16540 PF02028 BCCT, betaine/carnitine/choline family transporter JT727_16545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JT727_16545 PF00355 Rieske [2Fe-2S] domain JT727_16550 PF00171 Aldehyde dehydrogenase family JT727_16555 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_16555 PF00970 Oxidoreductase FAD-binding domain JT727_16555 PF00175 Oxidoreductase NAD-binding domain JT727_16560 PF02896 PEP-utilising enzyme, TIM barrel domain JT727_16560 PF00391 PEP-utilising enzyme, mobile domain JT727_16560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_16560 PF05524 PEP-utilising enzyme, N-terminal JT727_16560 PF00381 PTS HPr component phosphorylation site JT727_16570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_16575 PF02901 Pyruvate formate lyase-like JT727_16575 PF01228 Glycine radical JT727_16580 PF04055 Radical SAM superfamily JT727_16585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_16595 PF12833 Helix-turn-helix domain JT727_16600 PF00990 Diguanylate cyclase, GGDEF domain JT727_16605 PF00005 ABC transporter JT727_16610 PF00528 Binding-protein-dependent transport system inner membrane component JT727_16620 PF12792 CSS motif domain associated with EAL JT727_16620 PF00563 EAL domain JT727_16625 PF01740 STAS domain JT727_16630 PF00343 Carbohydrate phosphorylase JT727_16640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_16645 PF01027 Inhibitor of apoptosis-promoting Bax1 JT727_16650 PF04358 DsrC like protein JT727_16655 PF00708 Acylphosphatase JT727_16660 PF12833 Helix-turn-helix domain JT727_16665 PF01161 Phosphatidylethanolamine-binding protein JT727_16670 PF17785 PUA-like domain JT727_16670 PF10672 S-adenosylmethionine-dependent methyltransferase JT727_16675 PF08755 Hemimethylated DNA-binding protein YccV like JT727_16680 PF13380 CoA binding domain JT727_16685 PF02142 MGS-like domain JT727_16690 PF00580 UvrD/REP helicase N-terminal domain JT727_16690 PF12462 DNA helicase IV / RNA helicase N terminal JT727_16690 PF13361 UvrD-like helicase C-terminal domain JT727_16695 PF03733 Inner membrane component domain JT727_16700 PF12805 FUSC-like inner membrane protein yccS JT727_16705 PF04994 TfoX C-terminal domain JT727_16705 PF04993 TfoX N-terminal domain JT727_16710 PF03846 Cell division inhibitor SulA JT727_16715 PF00691 OmpA family JT727_16715 PF01389 OmpA-like transmembrane domain JT727_16720 PF06303 MatP N-terminal domain JT727_16720 PF17414 MatP C-terminal ribbon-helix-helix domain JT727_16725 PF05362 Lon protease (S16) C-terminal proteolytic domain JT727_16725 PF13654 AAA domain JT727_16730 PF07977 FabA-like domain JT727_16735 PF04957 Ribosome modulation factor JT727_16740 PF03886 ABC-type transport auxiliary lipoprotein component JT727_16745 PF02470 MlaD protein JT727_16750 PF04403 Paraquat-inducible protein A JT727_16755 PF00005 ABC transporter JT727_16755 PF12848 ABC transporter JT727_16755 PF16326 ABC transporter C-terminal domain JT727_16760 PF01170 Putative RNA methylase family UPF0020 JT727_16760 PF10672 S-adenosylmethionine-dependent methyltransferase JT727_16760 PF02926 THUMP domain JT727_16765 PF03476 MOSC N-terminal beta barrel domain JT727_16765 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_16765 PF03473 MOSC domain JT727_16770 PF07126 Cell-division protein ZapC JT727_16775 PF01180 Dihydroorotate dehydrogenase JT727_16780 PF03358 NADPH-dependent FMN reductase JT727_16785 PF09084 NMT1/THI5 like JT727_16790 PF00296 Luciferase-like monooxygenase JT727_16795 PF00528 Binding-protein-dependent transport system inner membrane component JT727_16800 PF00005 ABC transporter JT727_16805 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JT727_16805 PF11940 Domain of unknown function (DUF3458) Ig-like fold JT727_16805 PF01433 Peptidase family M1 domain JT727_16810 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JT727_16810 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JT727_16815 PF07687 Peptidase dimerisation domain JT727_16815 PF01546 Peptidase family M20/M25/M40 JT727_16820 PF01546 Peptidase family M20/M25/M40 JT727_16820 PF07687 Peptidase dimerisation domain JT727_16830 PF00291 Pyridoxal-phosphate dependent enzyme JT727_16840 PF01336 OB-fold nucleic acid binding domain JT727_16840 PF00152 tRNA synthetases class II (D, K and N) JT727_16850 PF00155 Aminotransferase class I and II JT727_16855 PF00753 Metallo-beta-lactamase superfamily JT727_16860 PF05951 Bacterial protein of unknown function (DUF882) JT727_16865 PF03734 L,D-transpeptidase catalytic domain JT727_16865 PF01471 Putative peptidoglycan binding domain JT727_16870 PF16330 MukB hinge domain JT727_16870 PF04310 MukB N-terminal JT727_16875 PF04288 MukE-like family JT727_16880 PF03882 MukF winged-helix domain JT727_16880 PF17193 MukF C-terminal domain JT727_16880 PF17192 MukF middle domain JT727_16885 PF13847 Methyltransferase domain JT727_16890 PF02698 DUF218 domain JT727_16895 PF01636 Phosphotransferase enzyme family JT727_16900 PF02348 Cytidylyltransferase JT727_16905 PF03966 Trm112p-like protein JT727_16910 PF06224 Winged helix DNA-binding domain JT727_16915 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JT727_16920 PF00005 ABC transporter JT727_16920 PF00664 ABC transporter transmembrane region JT727_16925 PF03772 Competence protein JT727_16925 PF00753 Metallo-beta-lactamase superfamily JT727_16930 PF00216 Bacterial DNA-binding protein JT727_16935 PF00575 S1 RNA binding domain JT727_16940 PF02224 Cytidylate kinase JT727_16945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JT727_16950 PF00266 Aminotransferase class-V JT727_16955 PF04239 Protein of unknown function (DUF421) JT727_16960 PF18381 YcaO cyclodehydratase C-terminal domain JT727_16960 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JT727_16965 PF01226 Formate/nitrite transporter JT727_16970 PF02901 Pyruvate formate lyase-like JT727_16970 PF01228 Glycine radical JT727_16975 PF04055 Radical SAM superfamily JT727_16980 PF07690 Major Facilitator Superfamily JT727_16985 PF04976 DMSO reductase anchor subunit (DmsC) JT727_16990 PF13247 4Fe-4S dicluster domain JT727_16990 PF12800 4Fe-4S binding domain JT727_16995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT727_16995 PF00384 Molybdopterin oxidoreductase JT727_16995 PF01568 Molydopterin dinucleotide binding domain JT727_17000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JT727_17000 PF02403 Seryl-tRNA synthetase N-terminal domain JT727_17005 PF12002 MgsA AAA+ ATPase C terminal JT727_17005 PF16193 AAA C-terminal domain JT727_17005 PF00004 ATPase family associated with various cellular activities (AAA) JT727_17010 PF03548 Outer membrane lipoprotein carrier protein LolA JT727_17015 PF17854 FtsK alpha domain JT727_17015 PF09397 Ftsk gamma domain JT727_17015 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JT727_17015 PF01580 FtsK/SpoIIIE family JT727_17020 PF01037 Lrp/AsnC ligand binding domain JT727_17025 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_17030 PF00664 ABC transporter transmembrane region JT727_17030 PF00005 ABC transporter JT727_17035 PF00664 ABC transporter transmembrane region JT727_17035 PF00005 ABC transporter JT727_17040 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JT727_17045 PF01176 Translation initiation factor 1A / IF-1 JT727_17050 PF07724 AAA domain (Cdc48 subfamily) JT727_17050 PF02861 Clp amino terminal domain, pathogenicity island component JT727_17050 PF10431 C-terminal, D2-small domain, of ClpB protein JT727_17050 PF00004 ATPase family associated with various cellular activities (AAA) JT727_17050 PF17871 AAA lid domain JT727_17055 PF02617 ATP-dependent Clp protease adaptor protein ClpS JT727_17060 PF00313 'Cold-shock' DNA-binding domain JT727_17065 PF12704 MacB-like periplasmic core domain JT727_17065 PF02687 FtsX-like permease family JT727_17065 PF00005 ABC transporter JT727_17070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_17075 PF11398 Protein of unknown function (DUF2813) JT727_17080 PF00230 Major intrinsic protein JT727_17085 PF03956 Lysine exporter LysO JT727_17090 PF03063 Prismane/CO dehydrogenase family JT727_17095 PF00970 Oxidoreductase FAD-binding domain JT727_17095 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_17095 PF00175 Oxidoreductase NAD-binding domain JT727_17105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_17105 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_17105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_17110 PF01212 Beta-eliminating lyase JT727_17115 PF13460 NAD(P)H-binding JT727_17115 PF11066 Protein of unknown function (DUF2867) JT727_17120 PF01370 NAD dependent epimerase/dehydratase family JT727_17125 PF01510 N-acetylmuramoyl-L-alanine amidase JT727_17130 PF00360 Phytochrome region JT727_17130 PF00990 Diguanylate cyclase, GGDEF domain JT727_17130 PF01590 GAF domain JT727_17130 PF00563 EAL domain JT727_17135 PF12883 Protein of unknown function (DUF3828) JT727_17140 PF00005 ABC transporter JT727_17145 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_17150 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17155 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17160 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_17165 PF00512 His Kinase A (phospho-acceptor) domain JT727_17165 PF18698 Histidine kinase sensor domain JT727_17165 PF00672 HAMP domain JT727_17165 PF00989 PAS fold JT727_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_17170 PF00072 Response regulator receiver domain JT727_17170 PF00486 Transcriptional regulatory protein, C terminal JT727_17175 PF05958 tRNA (Uracil-5-)-methyltransferase JT727_17180 PF10767 Protein of unknown function (DUF2593) JT727_17185 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17190 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17195 PF00005 ABC transporter JT727_17195 PF08402 TOBE domain JT727_17200 PF13416 Bacterial extracellular solute-binding protein JT727_17205 PF10722 Putative bacterial sensory transduction regulator JT727_17210 PF08443 RimK-like ATP-grasp domain JT727_17210 PF18030 RimK PreATP-grasp domain JT727_17215 PF00881 Nitroreductase family JT727_17220 PF07214 Protein of unknown function (DUF1418) JT727_17225 PF00462 Glutaredoxin JT727_17230 PF11045 Putative inner membrane protein of Enterobacteriaceae JT727_17235 PF02080 TrkA-C domain JT727_17235 PF06826 Predicted Permease Membrane Region JT727_17265 PF00156 Phosphoribosyl transferase domain JT727_17300 PF00440 Bacterial regulatory proteins, tetR family JT727_17305 PF07690 Major Facilitator Superfamily JT727_17315 PF07690 Major Facilitator Superfamily JT727_17320 PF01569 PAP2 superfamily JT727_17325 PF00455 DeoR C terminal sensor domain JT727_17325 PF08220 DeoR-like helix-turn-helix domain JT727_17330 PF07943 Penicillin-binding protein 5, C-terminal domain JT727_17330 PF00768 D-alanyl-D-alanine carboxypeptidase JT727_17340 PF00043 Glutathione S-transferase, C-terminal domain JT727_17340 PF13417 Glutathione S-transferase, N-terminal domain JT727_17345 PF07995 Glucose / Sorbosone dehydrogenase JT727_17350 PF10799 Biofilm formation protein (YliH/bssR) JT727_17360 PF04055 Radical SAM superfamily JT727_17360 PF00919 Uncharacterized protein family UPF0004 JT727_17360 PF18693 TRAM domain JT727_17365 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_17365 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17370 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_17380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_17380 PF00005 ABC transporter JT727_17385 PF01112 Asparaginase JT727_17390 PF00994 Probable molybdopterin binding domain JT727_17390 PF03453 MoeA N-terminal region (domain I and II) JT727_17390 PF03454 MoeA C-terminal region (domain IV) JT727_17395 PF00899 ThiF family JT727_17400 PF04055 Radical SAM superfamily JT727_17405 PF01228 Glycine radical JT727_17405 PF02901 Pyruvate formate lyase-like JT727_17415 PF07350 Protein of unknown function (DUF1479) JT727_17420 PF00356 Bacterial regulatory proteins, lacI family JT727_17425 PF07690 Major Facilitator Superfamily JT727_17430 PF13802 Galactose mutarotase-like JT727_17430 PF01055 Glycosyl hydrolases family 31 JT727_17430 PF17137 Domain of unknown function (DUF5110) JT727_17430 PF16338 Domain of unknown function (DUF4968) JT727_17435 PF00005 ABC transporter JT727_17435 PF12848 ABC transporter JT727_17440 PF13350 Tyrosine phosphatase family JT727_17445 PF17969 L,D-transpeptidase C-terminal domain JT727_17445 PF03734 L,D-transpeptidase catalytic domain JT727_17450 PF07702 UTRA domain JT727_17450 PF00392 Bacterial regulatory proteins, gntR family JT727_17455 PF00232 Glycosyl hydrolase family 1 JT727_17460 PF03600 Citrate transporter JT727_17465 PF01325 Iron dependent repressor, N-terminal DNA binding domain JT727_17465 PF02742 Iron dependent repressor, metal binding and dimerisation domain JT727_17475 PF00884 Sulfatase JT727_17480 PF13505 Outer membrane protein beta-barrel domain JT727_17485 PF00892 EamA-like transporter family JT727_17490 PF00210 Ferritin-like domain JT727_17495 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_17500 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17505 PF00005 ABC transporter JT727_17510 PF00924 Mechanosensitive ion channel JT727_17515 PF05971 RNA methyltransferase JT727_17520 PF01613 Flavin reductase like domain JT727_17530 PF01258 Prokaryotic dksA/traR C4-type zinc finger JT727_17535 PF07338 Protein of unknown function (DUF1471) JT727_17540 PF02885 Glycosyl transferase family, helical bundle domain JT727_17545 PF06733 DEAD_2 JT727_17545 PF00270 DEAD/DEAH box helicase JT727_17545 PF13307 Helicase C-terminal domain JT727_17550 PF00271 Helicase conserved C-terminal domain JT727_17550 PF00270 DEAD/DEAH box helicase JT727_17555 PF02779 Transketolase, pyrimidine binding domain JT727_17555 PF02780 Transketolase, C-terminal domain JT727_17565 PF00456 Transketolase, thiamine diphosphate binding domain JT727_17575 PF07690 Major Facilitator Superfamily JT727_17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_17585 PF03466 LysR substrate binding domain JT727_17590 PF00440 Bacterial regulatory proteins, tetR family JT727_17590 PF09209 Tetracyclin repressor-like, C-terminal domain JT727_17595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_17600 PF00005 ABC transporter JT727_17615 PF11076 Putative inner membrane protein YbhQ JT727_17620 PF03372 Endonuclease/Exonuclease/phosphatase family JT727_17625 PF13091 PLD-like domain JT727_17630 PF03706 Lysylphosphatidylglycerol synthase TM region JT727_17635 PF01027 Inhibitor of apoptosis-promoting Bax1 JT727_17640 PF02391 MoaE protein JT727_17645 PF02597 ThiS family JT727_17650 PF01967 MoaC family JT727_17655 PF00994 Probable molybdopterin binding domain JT727_17660 PF04055 Radical SAM superfamily JT727_17660 PF06463 Molybdenum Cofactor Synthesis C JT727_17665 PF01933 Uncharacterised protein family UPF0052 JT727_17670 PF08019 Phosphoethanolamine transferase EptA/EptB JT727_17670 PF00884 Sulfatase JT727_17675 PF00486 Transcriptional regulatory protein, C terminal JT727_17675 PF00072 Response regulator receiver domain JT727_17680 PF00512 His Kinase A (phospho-acceptor) domain JT727_17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_17685 PF00271 Helicase conserved C-terminal domain JT727_17685 PF12344 Ultra-violet resistance protein B JT727_17685 PF17757 UvrB interaction domain JT727_17685 PF02151 UvrB/uvrC motif JT727_17685 PF04851 Type III restriction enzyme, res subunit JT727_17695 PF00005 ABC transporter JT727_17705 PF08241 Methyltransferase domain JT727_17710 PF00155 Aminotransferase class I and II JT727_17715 PF04055 Radical SAM superfamily JT727_17715 PF06968 Biotin and Thiamin Synthesis associated domain JT727_17720 PF00202 Aminotransferase class-III JT727_17725 PF01161 Phosphatidylethanolamine-binding protein JT727_17730 PF00324 Amino acid permease JT727_17735 PF00221 Aromatic amino acid lyase JT727_17740 PF17392 Urocanase C-terminal domain JT727_17740 PF01175 Urocanase Rossmann-like domain JT727_17740 PF17391 Urocanase N-terminal domain JT727_17750 PF07702 UTRA domain JT727_17750 PF00392 Bacterial regulatory proteins, gntR family JT727_17755 PF00491 Arginase family JT727_17760 PF01979 Amidohydrolase family JT727_17765 PF01095 Pectinesterase JT727_17770 PF00690 Cation transporter/ATPase, N-terminus JT727_17770 PF00689 Cation transporting ATPase, C-terminus JT727_17775 PF00582 Universal stress protein family JT727_17780 PF13533 Biotin-lipoyl like JT727_17785 PF00873 AcrB/AcrD/AcrF family JT727_17815 PF13411 MerR HTH family regulatory protein JT727_17820 PF00563 EAL domain JT727_17820 PF04940 Sensors of blue-light using FAD JT727_17825 PF10798 Biofilm development protein YmgB/AriR JT727_17835 PF10798 Biofilm development protein YmgB/AriR JT727_17840 PF10282 Lactonase, 7-bladed beta-propeller JT727_17850 PF03459 TOBE domain JT727_17850 PF00005 ABC transporter JT727_17855 PF00528 Binding-protein-dependent transport system inner membrane component JT727_17865 PF10766 Multidrug efflux pump-associated protein AcrZ JT727_17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_17870 PF03459 TOBE domain JT727_17875 PF00005 ABC transporter JT727_17880 PF16363 GDP-mannose 4,6 dehydratase JT727_17885 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JT727_17885 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JT727_17890 PF10509 Galactokinase galactose-binding signature JT727_17890 PF00288 GHMP kinases N terminal domain JT727_17890 PF08544 GHMP kinases C terminal JT727_17895 PF01263 Aldose 1-epimerase JT727_17900 PF00300 Histidine phosphatase superfamily (branch 1) JT727_17905 PF00793 DAHP synthetase I family JT727_17910 PF13985 YbgS-like protein JT727_17915 PF01545 Cation efflux family JT727_17920 PF04973 Nicotinamide mononucleotide transporter JT727_17925 PF02445 Quinolinate synthetase A protein JT727_17970 PF13174 Tetratricopeptide repeat JT727_17970 PF16331 TolA binding protein trimerisation JT727_17975 PF00691 OmpA family JT727_17980 PF07676 WD40-like Beta Propeller Repeat JT727_17980 PF04052 TolB amino-terminal domain JT727_17985 PF06519 TolA C-terminal JT727_17990 PF02472 Biopolymer transport protein ExbD/TolR JT727_17995 PF01618 MotA/TolQ/ExbB proton channel family JT727_18000 PF03061 Thioesterase superfamily JT727_18005 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JT727_18010 PF08173 Membrane bound YbgT-like protein JT727_18015 PF02322 Cytochrome bd terminal oxidase subunit II JT727_18020 PF01654 Cytochrome bd terminal oxidase subunit I JT727_18025 PF00549 CoA-ligase JT727_18025 PF02629 CoA binding domain JT727_18030 PF00549 CoA-ligase JT727_18030 PF08442 ATP-grasp domain JT727_18035 PF00364 Biotin-requiring enzyme JT727_18035 PF02817 e3 binding domain JT727_18035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JT727_18040 PF16078 2-oxoglutarate dehydrogenase N-terminus JT727_18040 PF02779 Transketolase, pyrimidine binding domain JT727_18040 PF16870 2-oxoglutarate dehydrogenase C-terminal JT727_18040 PF00676 Dehydrogenase E1 component JT727_18045 PF13085 2Fe-2S iron-sulfur cluster binding domain JT727_18050 PF02910 Fumarate reductase flavoprotein C-term JT727_18050 PF00890 FAD binding domain JT727_18055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JT727_18060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JT727_18065 PF00285 Citrate synthase, C-terminal domain JT727_18070 PF06827 Zinc finger found in FPG and IleRS JT727_18070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JT727_18070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JT727_18075 PF01470 Pyroglutamyl peptidase JT727_18090 PF03746 LamB/YcsF family JT727_18095 PF02626 Carboxyltransferase domain, subdomain A and B JT727_18100 PF02682 Carboxyltransferase domain, subdomain C and D JT727_18105 PF01784 NIF3 (NGG1p interacting factor 3) JT727_18110 PF00854 POT family JT727_18115 PF03441 FAD binding domain of DNA photolyase JT727_18115 PF00875 DNA photolyase JT727_18120 PF10725 Protein of unknown function (DUF2517) JT727_18125 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) JT727_18130 PF03814 Potassium-transporting ATPase A subunit JT727_18140 PF02669 K+-transporting ATPase, c chain JT727_18145 PF13493 Domain of unknown function (DUF4118) JT727_18145 PF13492 GAF domain JT727_18145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_18145 PF00512 His Kinase A (phospho-acceptor) domain JT727_18145 PF02702 Osmosensitive K+ channel His kinase sensor domain JT727_18150 PF00486 Transcriptional regulatory protein, C terminal JT727_18150 PF00072 Response regulator receiver domain JT727_18160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JT727_18160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JT727_18160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JT727_18160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JT727_18165 PF17206 SeqA protein N-terminal domain JT727_18165 PF03925 SeqA protein C-terminal domain JT727_18170 PF12697 Alpha/beta hydrolase family JT727_18175 PF01402 Ribbon-helix-helix protein, copG family JT727_18180 PF00258 Flavodoxin JT727_18185 PF01475 Ferric uptake regulator family JT727_18195 PF13982 YbfN-like lipoprotein JT727_18200 PF03573 outer membrane porin, OprD family JT727_18210 PF00749 tRNA synthetases class I (E and Q), catalytic domain JT727_18210 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JT727_18215 PF02378 Phosphotransferase system, EIIC JT727_18215 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JT727_18215 PF00367 phosphotransferase system, EIIB JT727_18220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JT727_18225 PF01979 Amidohydrolase family JT727_18230 PF00480 ROK family JT727_18230 PF01047 MarR family JT727_18235 PF13344 Haloacid dehalogenase-like hydrolase JT727_18240 PF13537 Glutamine amidotransferase domain JT727_18240 PF00733 Asparagine synthase JT727_18280 PF01494 FAD binding domain JT727_18285 PF01938 TRAM domain JT727_18285 PF00919 Uncharacterized protein family UPF0004 JT727_18285 PF04055 Radical SAM superfamily JT727_18290 PF02562 PhoH-like protein JT727_18295 PF02130 Uncharacterized protein family UPF0054 JT727_18300 PF03471 Transporter associated domain JT727_18300 PF00571 CBS domain JT727_18305 PF00795 Carbon-nitrogen hydrolase JT727_18310 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_18315 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18320 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18325 PF00005 ABC transporter JT727_18330 PF08479 POTRA domain, ShlB-type JT727_18330 PF17287 POTRA domain JT727_18330 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JT727_18335 PF13332 Hemagglutinin repeat JT727_18335 PF04829 Pre-toxin domain with VENN motif JT727_18335 PF05594 Haemagluttinin repeat JT727_18335 PF05860 haemagglutination activity domain JT727_18335 PF14436 Bacterial EndoU nuclease JT727_18340 PF07295 Zinc-ribbon containing domain JT727_18345 PF08264 Anticodon-binding domain of tRNA JT727_18345 PF13603 Leucyl-tRNA synthetase, Domain 2 JT727_18345 PF00133 tRNA synthetases class I (I, L, M and V) JT727_18350 PF04390 Lipopolysaccharide-assembly JT727_18355 PF06144 DNA polymerase III, delta subunit JT727_18355 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JT727_18360 PF01467 Cytidylyltransferase-like JT727_18365 PF00300 Histidine phosphatase superfamily (branch 1) JT727_18375 PF02590 Predicted SPOUT methyltransferase JT727_18380 PF00905 Penicillin binding protein transpeptidase domain JT727_18380 PF03717 Penicillin-binding Protein dimerisation domain JT727_18385 PF01098 Cell cycle protein JT727_18390 PF05036 Sporulation related domain JT727_18390 PF03330 Lytic transglycolase JT727_18395 PF00768 D-alanyl-D-alanine carboxypeptidase JT727_18395 PF07943 Penicillin-binding protein 5, C-terminal domain JT727_18400 PF04359 Protein of unknown function (DUF493) JT727_18405 PF03099 Biotin/lipoate A/B protein ligase family JT727_18410 PF03466 LysR substrate binding domain JT727_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_18415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JT727_18415 PF04055 Radical SAM superfamily JT727_18420 PF02416 mttA/Hcf106 family JT727_18425 PF00795 Carbon-nitrogen hydrolase JT727_18430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JT727_18435 PF00313 'Cold-shock' DNA-binding domain JT727_18440 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP JT727_18445 PF03606 C4-dicarboxylate anaerobic carrier JT727_18450 PF00445 Ribonuclease T2 family JT727_18455 PF01272 Transcription elongation factor, GreA/GreB, C-term JT727_18455 PF14760 Rnk N-terminus JT727_18460 PF00582 Universal stress protein family JT727_18465 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_18465 PF13192 Thioredoxin domain JT727_18470 PF10417 C-terminal domain of 1-Cys peroxiredoxin JT727_18470 PF00578 AhpC/TSA family JT727_18475 PF13098 Thioredoxin-like domain JT727_18480 PF03466 LysR substrate binding domain JT727_18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_18485 PF11922 Domain of unknown function (DUF3440) JT727_18485 PF01507 Phosphoadenosine phosphosulfate reductase family JT727_18490 PF02195 ParB-like nuclease domain JT727_18495 PF00155 Aminotransferase class I and II JT727_18505 PF03079 ARD/ARD' family JT727_18510 PF01568 Molydopterin dinucleotide binding domain JT727_18510 PF00384 Molybdopterin oxidoreductase JT727_18520 PF00005 ABC transporter JT727_18525 PF02653 Branched-chain amino acid transport system / permease component JT727_18530 PF02653 Branched-chain amino acid transport system / permease component JT727_18540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT727_18540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT727_18545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_18545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_18550 PF00596 Class II Aldolase and Adducin N-terminal domain JT727_18555 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JT727_18565 PF07969 Amidohydrolase family JT727_18570 PF00356 Bacterial regulatory proteins, lacI family JT727_18575 PF00459 Inositol monophosphatase family JT727_18580 PF07690 Major Facilitator Superfamily JT727_18585 PF00328 Histidine phosphatase superfamily (branch 2) JT727_18590 PF01008 Initiation factor 2 subunit family JT727_18595 PF01636 Phosphotransferase enzyme family JT727_18610 PF02653 Branched-chain amino acid transport system / permease component JT727_18615 PF00005 ABC transporter JT727_18620 PF00465 Iron-containing alcohol dehydrogenase JT727_18640 PF04328 Selenoprotein, putative JT727_18645 PF13722 5TM C-terminal transporter carbon starvation CstA JT727_18645 PF02554 Carbon starvation protein CstA JT727_18650 PF03061 Thioesterase superfamily JT727_18660 PF00550 Phosphopantetheine attachment site JT727_18660 PF00857 Isochorismatase family JT727_18665 PF00501 AMP-binding enzyme JT727_18665 PF13193 AMP-binding enzyme C-terminal domain JT727_18670 PF00425 chorismate binding enzyme JT727_18675 PF01497 Periplasmic binding protein JT727_18680 PF05977 Transmembrane secretion effector JT727_18685 PF01032 FecCD transport family JT727_18690 PF01032 FecCD transport family JT727_18695 PF00005 ABC transporter JT727_18700 PF00501 AMP-binding enzyme JT727_18700 PF13193 AMP-binding enzyme C-terminal domain JT727_18700 PF00668 Condensation domain JT727_18700 PF00975 Thioesterase domain JT727_18700 PF00550 Phosphopantetheine attachment site JT727_18705 PF03621 MbtH-like protein JT727_18710 PF00756 Putative esterase JT727_18710 PF11806 Domain of unknown function (DUF3327) JT727_18715 PF00593 TonB dependent receptor JT727_18715 PF07715 TonB-dependent Receptor Plug Domain JT727_18720 PF01648 4'-phosphopantetheinyl transferase superfamily JT727_18720 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JT727_18725 PF13407 Periplasmic binding protein domain JT727_18735 PF00005 ABC transporter JT727_18740 PF02653 Branched-chain amino acid transport system / permease component JT727_18745 PF04754 Putative transposase, YhgA-like JT727_18750 PF00325 Bacterial regulatory proteins, crp family JT727_18750 PF04198 Putative sugar-binding domain JT727_18755 PF00456 Transketolase, thiamine diphosphate binding domain JT727_18760 PF02780 Transketolase, C-terminal domain JT727_18760 PF02779 Transketolase, pyrimidine binding domain JT727_18770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_18770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_18780 PF03466 LysR substrate binding domain JT727_18805 PF02028 BCCT, betaine/carnitine/choline family transporter JT727_18810 PF13977 BetI-type transcriptional repressor, C-terminal JT727_18810 PF00440 Bacterial regulatory proteins, tetR family JT727_18815 PF00171 Aldehyde dehydrogenase family JT727_18820 PF05199 GMC oxidoreductase JT727_18820 PF00732 GMC oxidoreductase JT727_18830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_18835 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18840 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18840 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_18845 PF00005 ABC transporter JT727_18845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_18850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_18850 PF00005 ABC transporter JT727_18855 PF00202 Aminotransferase class-III JT727_18860 PF00106 short chain dehydrogenase JT727_18865 PF00005 ABC transporter JT727_18870 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18875 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18880 PF01464 Transglycosylase SLT domain JT727_18880 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_18885 PF00155 Aminotransferase class I and II JT727_18885 PF00392 Bacterial regulatory proteins, gntR family JT727_18890 PF00155 Aminotransferase class I and II JT727_18895 PF00892 EamA-like transporter family JT727_18900 PF01546 Peptidase family M20/M25/M40 JT727_18900 PF07687 Peptidase dimerisation domain JT727_18905 PF00005 ABC transporter JT727_18905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_18910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT727_18910 PF00005 ABC transporter JT727_18915 PF12911 N-terminal TM domain of oligopeptide transport permease C JT727_18915 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18920 PF00528 Binding-protein-dependent transport system inner membrane component JT727_18925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_18930 PF04107 Glutamate-cysteine ligase family 2(GCS2) JT727_18935 PF09992 Phosphodiester glycosidase JT727_18940 PF00873 AcrB/AcrD/AcrF family JT727_18945 PF13533 Biotin-lipoyl like JT727_18950 PF00689 Cation transporting ATPase, C-terminus JT727_18950 PF00690 Cation transporter/ATPase, N-terminus JT727_18955 PF06643 Protein of unknown function (DUF1158) JT727_18960 PF12833 Helix-turn-helix domain JT727_18965 PF12706 Beta-lactamase superfamily domain JT727_18970 PF00440 Bacterial regulatory proteins, tetR family JT727_18975 PF04237 YjbR JT727_18980 PF00881 Nitroreductase family JT727_19005 PF07690 Major Facilitator Superfamily JT727_19010 PF00924 Mechanosensitive ion channel JT727_19015 PF00356 Bacterial regulatory proteins, lacI family JT727_19025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_19025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_19035 PF03825 Nucleoside H+ symporter JT727_19040 PF00324 Amino acid permease JT727_19045 PF00593 TonB dependent receptor JT727_19045 PF07715 TonB-dependent Receptor Plug Domain JT727_19055 PF00171 Aldehyde dehydrogenase family JT727_19060 PF01266 FAD dependent oxidoreductase JT727_19070 PF13520 Amino acid permease JT727_19085 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system JT727_19090 PF00850 Histone deacetylase domain JT727_19100 PF00196 Bacterial regulatory proteins, luxR family JT727_19105 PF04055 Radical SAM superfamily JT727_19110 PF00884 Sulfatase JT727_19120 PF17409 MoaF C-terminal domain JT727_19120 PF10703 MoaF N-terminal domain JT727_19125 PF00248 Aldo/keto reductase family JT727_19130 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_19135 PF07687 Peptidase dimerisation domain JT727_19135 PF01546 Peptidase family M20/M25/M40 JT727_19165 PF01032 FecCD transport family JT727_19170 PF00005 ABC transporter JT727_19175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_19175 PF00529 HlyD membrane-fusion protein of T1SS JT727_19180 PF11742 Protein of unknown function (DUF3302) JT727_19190 PF00294 pfkB family carbohydrate kinase JT727_19195 PF02264 LamB porin JT727_19195 PF11471 Maltoporin periplasmic N-terminal extension JT727_19200 PF00367 phosphotransferase system, EIIB JT727_19200 PF02378 Phosphotransferase system, EIIC JT727_19205 PF08244 Glycosyl hydrolases family 32 C terminal JT727_19205 PF00251 Glycosyl hydrolases family 32 N-terminal domain JT727_19210 PF00356 Bacterial regulatory proteins, lacI family JT727_19210 PF13407 Periplasmic binding protein domain JT727_19220 PF02653 Branched-chain amino acid transport system / permease component JT727_19225 PF00005 ABC transporter JT727_19230 PF13407 Periplasmic binding protein domain JT727_19235 PF00356 Bacterial regulatory proteins, lacI family JT727_19240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_19240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_19245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_19245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_19250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_19250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_19255 PF01261 Xylose isomerase-like TIM barrel JT727_19265 PF00152 tRNA synthetases class II (D, K and N) JT727_19265 PF01336 OB-fold nucleic acid binding domain JT727_19270 PF00854 POT family JT727_19275 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JT727_19275 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JT727_19275 PF01276 Orn/Lys/Arg decarboxylase, major domain JT727_19280 PF13520 Amino acid permease JT727_19285 PF00486 Transcriptional regulatory protein, C terminal JT727_19285 PF18500 CadC C-terminal domain 1 JT727_19295 PF03279 Bacterial lipid A biosynthesis acyltransferase JT727_19310 PF13953 PapC C-terminal domain JT727_19310 PF13954 PapC N-terminal domain JT727_19310 PF00577 Outer membrane usher protein JT727_19315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_19315 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_19320 PF16970 Type-1 fimbrial protein, A JT727_19335 PF00285 Citrate synthase, C-terminal domain JT727_19350 PF00576 HIUase/Transthyretin family JT727_19360 PF00717 Peptidase S24-like JT727_19430 PF04984 Phage tail sheath protein subtilisin-like domain JT727_19430 PF17482 Phage tail sheath C-terminal domain JT727_19505 PF03245 Bacteriophage Rz lysis protein JT727_19510 PF00959 Phage lysozyme JT727_19610 PF00717 Peptidase S24-like JT727_19610 PF01381 Helix-turn-helix JT727_19690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JT727_19690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JT727_19700 PF09190 DALR domain JT727_19700 PF01406 tRNA synthetases class I (C) catalytic domain JT727_19705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JT727_19710 PF00149 Calcineurin-like phosphoesterase JT727_19720 PF00731 AIR carboxylase JT727_19725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JT727_19725 PF02222 ATP-grasp domain JT727_19750 PF00005 ABC transporter JT727_19755 PF13472 GDSL-like Lipase/Acylhydrolase family JT727_19760 PF00106 short chain dehydrogenase JT727_19765 PF00085 Thioredoxin JT727_19770 PF03649 Uncharacterised protein family (UPF0014) JT727_19775 PF00005 ABC transporter JT727_19780 PF01145 SPFH domain / Band 7 family JT727_19780 PF16200 C-terminal region of band_7 JT727_19785 PF01957 NfeD-like C-terminal, partner-binding JT727_19790 PF13411 MerR HTH family regulatory protein JT727_19795 PF00403 Heavy-metal-associated domain JT727_19800 PF01963 TraB family JT727_19805 PF04073 Aminoacyl-tRNA editing domain JT727_19810 PF00149 Calcineurin-like phosphoesterase JT727_19810 PF02872 5'-nucleotidase, C-terminal domain JT727_19815 PF07690 Major Facilitator Superfamily JT727_19820 PF00999 Sodium/hydrogen exchanger family JT727_19820 PF02254 TrkA-N domain JT727_19825 PF00294 pfkB family carbohydrate kinase JT727_19830 PF00762 Ferrochelatase JT727_19835 PF05191 Adenylate kinase, active site lid JT727_19840 PF00183 Hsp90 protein JT727_19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_19845 PF13662 Toprim domain JT727_19845 PF02132 RecR protein JT727_19850 PF02575 YbaB/EbfC DNA-binding family JT727_19855 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JT727_19855 PF12169 DNA polymerase III subunits gamma and tau domain III JT727_19855 PF12170 DNA polymerase III tau subunit V interacting with alpha JT727_19860 PF00156 Phosphoribosyl transferase domain JT727_19865 PF04304 Protein of unknown function (DUF454) JT727_19870 PF07445 Primosomal replication protein priC JT727_19875 PF10689 Protein of unknown function (DUF2496) JT727_19880 PF04754 Putative transposase, YhgA-like JT727_19885 PF12794 Mechanosensitive ion channel inner membrane domain 1 JT727_19885 PF12795 Mechanosensitive ion channel porin domain JT727_19885 PF00924 Mechanosensitive ion channel JT727_19890 PF08361 MAATS-type transcriptional repressor, C-terminal region JT727_19890 PF00440 Bacterial regulatory proteins, tetR family JT727_19895 PF00529 HlyD membrane-fusion protein of T1SS JT727_19895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_19900 PF00873 AcrB/AcrD/AcrF family JT727_19905 PF10757 Biofilm formation regulator YbaJ JT727_19910 PF05321 Haemolysin expression modulating protein JT727_19915 PF14602 Hexapeptide repeat of succinyl-transferase JT727_19915 PF12464 Maltose acetyltransferase JT727_19925 PF10777 Inner membrane protein YlaC JT727_19930 PF00155 Aminotransferase class I and II JT727_19930 PF00392 Bacterial regulatory proteins, gntR family JT727_19940 PF00444 Ribosomal protein L36 JT727_19945 PF01197 Ribosomal protein L31 JT727_19950 PF00356 Bacterial regulatory proteins, lacI family JT727_19955 PF02264 LamB porin JT727_19960 PF02378 Phosphotransferase system, EIIC JT727_19960 PF00367 phosphotransferase system, EIIB JT727_19965 PF08533 Beta-galactosidase C-terminal domain JT727_19965 PF08532 Beta-galactosidase trimerisation domain JT727_19965 PF02449 Beta-galactosidase JT727_19970 PF07745 Glycosyl hydrolase family 53 JT727_19975 PF00528 Binding-protein-dependent transport system inner membrane component JT727_19980 PF00528 Binding-protein-dependent transport system inner membrane component JT727_19985 PF13416 Bacterial extracellular solute-binding protein JT727_19990 PF17912 MalK OB fold domain JT727_19990 PF00005 ABC transporter JT727_19995 PF00563 EAL domain JT727_19995 PF12792 CSS motif domain associated with EAL JT727_20000 PF02583 Metal-sensitive transcriptional repressor JT727_20005 PF03824 High-affinity nickel-transport protein JT727_20040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JT727_20045 PF09619 Type III secretion system lipoprotein chaperone (YscW) JT727_20055 PF00909 Ammonium Transporter Family JT727_20060 PF00543 Nitrogen regulatory protein P-II JT727_20065 PF00005 ABC transporter JT727_20065 PF00664 ABC transporter transmembrane region JT727_20070 PF00005 ABC transporter JT727_20070 PF00664 ABC transporter transmembrane region JT727_20075 PF01037 Lrp/AsnC ligand binding domain JT727_20075 PF13404 AsnC-type helix-turn-helix domain JT727_20080 PF00291 Pyridoxal-phosphate dependent enzyme JT727_20090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_20090 PF12793 Sugar transport-related sRNA regulator N-term JT727_20095 PF06508 Queuosine biosynthesis protein QueC JT727_20110 PF13145 PPIC-type PPIASE domain JT727_20115 PF00216 Bacterial DNA-binding protein JT727_20120 PF02190 ATP-dependent protease La (LON) substrate-binding domain JT727_20120 PF05362 Lon protease (S16) C-terminal proteolytic domain JT727_20120 PF00004 ATPase family associated with various cellular activities (AAA) JT727_20125 PF06689 ClpX C4-type zinc finger JT727_20125 PF10431 C-terminal, D2-small domain, of ClpB protein JT727_20125 PF07724 AAA domain (Cdc48 subfamily) JT727_20130 PF00574 Clp protease JT727_20135 PF05697 Bacterial trigger factor protein (TF) JT727_20135 PF05698 Bacterial trigger factor protein (TF) C-terminus JT727_20135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT727_20140 PF01722 BolA-like protein JT727_20145 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JT727_20145 PF03923 Uncharacterized lipoprotein JT727_20150 PF07690 Major Facilitator Superfamily JT727_20155 PF06481 COX Aromatic Rich Motif JT727_20155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JT727_20160 PF00115 Cytochrome C and Quinol oxidase polypeptide I JT727_20165 PF00510 Cytochrome c oxidase subunit III JT727_20170 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JT727_20175 PF01040 UbiA prenyltransferase family JT727_20185 PF09339 IclR helix-turn-helix domain JT727_20185 PF01614 Bacterial transcriptional regulator JT727_20190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT727_20190 PF01488 Shikimate / quinate 5-dehydrogenase JT727_20190 PF08501 Shikimate dehydrogenase substrate binding domain JT727_20195 PF00890 FAD binding domain JT727_20205 PF00890 FAD binding domain JT727_20215 PF07690 Major Facilitator Superfamily JT727_20220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_20220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_20225 PF07690 Major Facilitator Superfamily JT727_20230 PF04461 Protein of unknown function (DUF520) JT727_20235 PF02558 Ketopantoate reductase PanE/ApbA JT727_20235 PF08546 Ketopantoate reductase PanE/ApbA C terminal JT727_20240 PF01965 DJ-1/PfpI family JT727_20250 PF02568 Thiamine biosynthesis protein (ThiI) JT727_20250 PF02926 THUMP domain JT727_20255 PF02609 Exonuclease VII small subunit JT727_20260 PF00348 Polyprenyl synthetase JT727_20265 PF02780 Transketolase, C-terminal domain JT727_20265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JT727_20265 PF02779 Transketolase, pyrimidine binding domain JT727_20270 PF00248 Aldo/keto reductase family JT727_20275 PF04608 Phosphatidylglycerophosphatase A JT727_20280 PF02769 AIR synthase related protein, C-terminal domain JT727_20280 PF00586 AIR synthase related protein, N-terminal domain JT727_20285 PF01029 NusB family JT727_20290 PF00885 6,7-dimethyl-8-ribityllumazine synthase JT727_20295 PF01872 RibD C-terminal domain JT727_20295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JT727_20300 PF03477 ATP cone domain JT727_20305 PF11622 Protein of unknown function (DUF3251) JT727_20310 PF03502 Nucleoside-specific channel-forming protein, Tsx JT727_20325 PF07549 SecD/SecF GG Motif JT727_20325 PF02355 Protein export membrane protein JT727_20330 PF02355 Protein export membrane protein JT727_20330 PF07549 SecD/SecF GG Motif JT727_20330 PF13721 SecD export protein N-terminal TM region JT727_20335 PF02699 Preprotein translocase subunit JT727_20340 PF01702 Queuine tRNA-ribosyltransferase JT727_20345 PF02547 Queuosine biosynthesis protein JT727_20355 PF04336 Acyl carrier protein phosphodiesterase JT727_20360 PF10417 C-terminal domain of 1-Cys peroxiredoxin JT727_20360 PF00578 AhpC/TSA family JT727_20365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_20375 PF03611 PTS system sugar-specific permease component JT727_20380 PF00294 pfkB family carbohydrate kinase JT727_20385 PF01116 Fructose-bisphosphate aldolase class-II JT727_20390 PF01979 Amidohydrolase family JT727_20400 PF00857 Isochorismatase family JT727_20405 PF03466 LysR substrate binding domain JT727_20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_20410 PF00128 Alpha amylase, catalytic domain JT727_20410 PF02903 Alpha amylase, N-terminal ig-like domain JT727_20415 PF00324 Amino acid permease JT727_20420 PF05525 Branched-chain amino acid transport protein JT727_20425 PF00989 PAS fold JT727_20425 PF00512 His Kinase A (phospho-acceptor) domain JT727_20425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_20425 PF11808 Phosphate regulon sensor protein PhoR JT727_20430 PF00072 Response regulator receiver domain JT727_20430 PF00486 Transcriptional regulatory protein, C terminal JT727_20435 PF00149 Calcineurin-like phosphoesterase JT727_20435 PF12320 Type 5 capsule protein repressor C-terminal domain JT727_20440 PF13476 AAA domain JT727_20445 PF00480 ROK family JT727_20450 PF04381 Putative exonuclease, RdgC JT727_20455 PF06865 Pyrimidine/purine nucleoside phosphorylase JT727_20460 PF07302 AroM protein JT727_20465 PF16362 YaiA protein JT727_20470 PF01202 Shikimate kinase JT727_20475 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JT727_20480 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JT727_20485 PF03807 NADP oxidoreductase coenzyme F420-dependent JT727_20485 PF14748 Pyrroline-5-carboxylate reductase dimerisation JT727_20490 PF07769 psiF repeat JT727_20495 PF00245 Alkaline phosphatase JT727_20500 PF10796 Sigma-S stabilisation anti-adaptor protein JT727_20505 PF07690 Major Facilitator Superfamily JT727_20515 PF07478 D-ala D-ala ligase C-terminus JT727_20515 PF01820 D-ala D-ala ligase N-terminus JT727_20520 PF10953 Protein of unknown function (DUF2754) JT727_20525 PF10954 Protein of unknown function (DUF2755) JT727_20530 PF07759 Protein of unknown function (DUF1615) JT727_20535 PF05992 SbmA/BacA-like family JT727_20540 PF00857 Isochorismatase family JT727_20545 PF00144 Beta-lactamase JT727_20550 PF00490 Delta-aminolevulinic acid dehydratase JT727_20565 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JT727_20570 PF00528 Binding-protein-dependent transport system inner membrane component JT727_20575 PF00005 ABC transporter JT727_20580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JT727_20585 PF02574 Homocysteine S-methyltransferase JT727_20590 PF00324 Amino acid permease JT727_20600 PF00324 Amino acid permease JT727_20605 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JT727_20610 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JT727_20620 PF13458 Periplasmic binding protein JT727_20625 PF02653 Branched-chain amino acid transport system / permease component JT727_20630 PF11862 Domain of unknown function (DUF3382) JT727_20630 PF02653 Branched-chain amino acid transport system / permease component JT727_20635 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT727_20635 PF00005 ABC transporter JT727_20640 PF00005 ABC transporter JT727_20650 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_20655 PF00005 ABC transporter JT727_20660 PF00528 Binding-protein-dependent transport system inner membrane component JT727_20665 PF00528 Binding-protein-dependent transport system inner membrane component JT727_20680 PF15976 CS1-pili formation C-terminal JT727_20680 PF16967 E-set like domain JT727_20685 PF18649 EcpB C-terminal domain JT727_20690 PF16449 Fimbrillin MatB JT727_20695 PF00196 Bacterial regulatory proteins, luxR family JT727_20700 PF00005 ABC transporter JT727_20710 PF00528 Binding-protein-dependent transport system inner membrane component JT727_20715 PF00528 Binding-protein-dependent transport system inner membrane component JT727_20740 PF00877 NlpC/P60 family JT727_20745 PF00267 Gram-negative porin JT727_20750 PF01472 PUA domain JT727_20750 PF00696 Amino acid kinase family JT727_20755 PF00171 Aldehyde dehydrogenase family JT727_20775 PF13953 PapC C-terminal domain JT727_20775 PF00577 Outer membrane usher protein JT727_20775 PF13954 PapC N-terminal domain JT727_20780 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_20780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_20785 PF00419 Fimbrial protein JT727_20800 PF00486 Transcriptional regulatory protein, C terminal JT727_20815 PF13505 Outer membrane protein beta-barrel domain JT727_20830 PF00563 EAL domain JT727_20830 PF12792 CSS motif domain associated with EAL JT727_20845 PF00419 Fimbrial protein JT727_20850 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_20850 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_20855 PF13954 PapC N-terminal domain JT727_20855 PF13953 PapC C-terminal domain JT727_20855 PF00577 Outer membrane usher protein JT727_20865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_20865 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_20875 PF13847 Methyltransferase domain JT727_20880 PF09857 Putative toxin of bacterial toxin-antitoxin pair JT727_20885 PF08943 CsiD JT727_20890 PF01266 FAD dependent oxidoreductase JT727_20895 PF00171 Aldehyde dehydrogenase family JT727_20915 PF00324 Amino acid permease JT727_20920 PF00392 Bacterial regulatory proteins, gntR family JT727_20920 PF07729 FCD domain JT727_20930 PF03466 LysR substrate binding domain JT727_20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_20935 PF00248 Aldo/keto reductase family JT727_20940 PF00106 short chain dehydrogenase JT727_20955 PF07417 Sigma factor-binding transcriptional regulator Crl JT727_20960 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JT727_20965 PF00156 Phosphoribosyl transferase domain JT727_20970 PF07687 Peptidase dimerisation domain JT727_20970 PF01546 Peptidase family M20/M25/M40 JT727_20975 PF13673 Acetyltransferase (GNAT) domain JT727_20980 PF11798 IMS family HHH motif JT727_20980 PF11799 impB/mucB/samB family C-terminal domain JT727_20980 PF00817 impB/mucB/samB family JT727_20985 PF03009 Glycerophosphoryl diester phosphodiesterase family JT727_20990 PF04400 (Na+)-NQR maturation NqrM JT727_20995 PF00175 Oxidoreductase NAD-binding domain JT727_20995 PF00111 2Fe-2S iron-sulfur cluster binding domain JT727_20995 PF00970 Oxidoreductase FAD-binding domain JT727_21000 PF02508 Rnf-Nqr subunit, membrane protein JT727_21005 PF02508 Rnf-Nqr subunit, membrane protein JT727_21010 PF04205 FMN-binding domain JT727_21015 PF03116 NQR2, RnfD, RnfE family JT727_21020 PF11973 NQRA C-terminal domain JT727_21020 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JT727_21025 PF03734 L,D-transpeptidase catalytic domain JT727_21030 PF13230 Glutamine amidotransferases class-II JT727_21035 PF13580 SIS domain JT727_21040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JT727_21040 PF09317 Domain of unknown function (DUF1974) JT727_21040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JT727_21040 PF02770 Acyl-CoA dehydrogenase, middle domain JT727_21045 PF00795 Carbon-nitrogen hydrolase JT727_21050 PF01810 LysE type translocator JT727_21055 PF03466 LysR substrate binding domain JT727_21055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_21065 PF00929 Exonuclease JT727_21070 PF00075 RNase H JT727_21075 PF08241 Methyltransferase domain JT727_21080 PF00753 Metallo-beta-lactamase superfamily JT727_21080 PF16123 Hydroxyacylglutathione hydrolase C-terminus JT727_21085 PF01476 LysM domain JT727_21085 PF01464 Transglycosylase SLT domain JT727_21090 PF08241 Methyltransferase domain JT727_21095 PF03372 Endonuclease/Exonuclease/phosphatase family JT727_21100 PF07690 Major Facilitator Superfamily JT727_21105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_21105 PF03466 LysR substrate binding domain JT727_21110 PF00248 Aldo/keto reductase family JT727_21150 PF09383 NIL domain JT727_21150 PF00005 ABC transporter JT727_21155 PF00528 Binding-protein-dependent transport system inner membrane component JT727_21160 PF03180 NLPA lipoprotein JT727_21165 PF16358 RcsF lipoprotein JT727_21170 PF18389 TrmO C-terminal domain JT727_21170 PF01980 tRNA-methyltransferase O JT727_21175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JT727_21175 PF03129 Anticodon binding domain JT727_21175 PF04073 Aminoacyl-tRNA editing domain JT727_21180 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JT727_21185 PF04170 NlpE N-terminal domain JT727_21185 PF17185 NlpE C-terminal OB domain JT727_21190 PF00472 RF-1 domain JT727_21195 PF07152 YaeQ protein JT727_21200 PF06786 Uncharacterised protein family (UPF0253) JT727_21205 PF07073 Modulator of Rho-dependent transcription termination (ROF) JT727_21210 PF01171 PP-loop family JT727_21210 PF09179 TilS substrate binding domain JT727_21210 PF11734 TilS substrate C-terminal domain JT727_21215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT727_21220 PF01276 Orn/Lys/Arg decarboxylase, major domain JT727_21220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JT727_21220 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JT727_21225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JT727_21230 PF07733 Bacterial DNA polymerase III alpha NTPase domain JT727_21230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JT727_21230 PF14579 Helix-hairpin-helix motif JT727_21230 PF01336 OB-fold nucleic acid binding domain JT727_21230 PF02811 PHP domain JT727_21235 PF01351 Ribonuclease HII JT727_21240 PF02684 Lipid-A-disaccharide synthetase JT727_21245 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_21245 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JT727_21250 PF07977 FabA-like domain JT727_21255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JT727_21255 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_21260 PF03938 Outer membrane protein (OmpH-like) JT727_21265 PF01103 Surface antigen JT727_21265 PF07244 Surface antigen variable number repeat JT727_21270 PF02163 Peptidase family M50 JT727_21270 PF17820 PDZ domain JT727_21280 PF01255 Putative undecaprenyl diphosphate synthase JT727_21285 PF13288 DXP reductoisomerase C-terminal domain JT727_21285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JT727_21285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JT727_21290 PF01765 Ribosome recycling factor JT727_21295 PF00696 Amino acid kinase family JT727_21300 PF00889 Elongation factor TS JT727_21305 PF00318 Ribosomal protein S2 JT727_21310 PF00557 Metallopeptidase family M24 JT727_21315 PF01842 ACT domain JT727_21315 PF08335 GlnD PII-uridylyltransferase JT727_21315 PF01966 HD domain JT727_21315 PF01909 Nucleotidyltransferase domain JT727_21320 PF14602 Hexapeptide repeat of succinyl-transferase JT727_21320 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JT727_21320 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_21325 PF11944 Protein of unknown function (DUF3461) JT727_21330 PF17853 GGDEF-like domain JT727_21330 PF05651 Putative sugar diacid recognition JT727_21330 PF13556 PucR C-terminal helix-turn-helix domain JT727_21335 PF00595 PDZ domain JT727_21340 PF13286 Phosphohydrolase-associated domain JT727_21340 PF01966 HD domain JT727_21345 PF01048 Phosphorylase superfamily JT727_21350 PF01497 Periplasmic binding protein JT727_21355 PF03458 UPF0126 domain JT727_21360 PF01521 Iron-sulphur cluster biosynthesis JT727_21365 PF00654 Voltage gated chloride channel JT727_21370 PF00202 Aminotransferase class-III JT727_21375 PF01032 FecCD transport family JT727_21380 PF01497 Periplasmic binding protein JT727_21385 PF00005 ABC transporter JT727_21390 PF07715 TonB-dependent Receptor Plug Domain JT727_21390 PF00593 TonB dependent receptor JT727_21395 PF14814 Bifunctional transglycosylase second domain JT727_21395 PF00912 Transglycosylase JT727_21395 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal JT727_21395 PF00905 Penicillin binding protein transpeptidase domain JT727_21405 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JT727_21410 PF16537 Type II secretion system protein B JT727_21415 PF18494 Pullulanase Ins domain JT727_21415 PF17967 Pullulanase N2 domain JT727_21415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT727_21415 PF03714 Bacterial pullanase-associated domain JT727_21415 PF11852 Domain of unknown function (DUF3372) JT727_21425 PF11356 Type II secretion system protein C JT727_21430 PF00263 Bacterial type II and III secretion system protein JT727_21430 PF03958 Bacterial type II/III secretion system short domain JT727_21435 PF00437 Type II/IV secretion system protein JT727_21440 PF00482 Type II secretion system (T2SS), protein F JT727_21445 PF07963 Prokaryotic N-terminal methylation motif JT727_21445 PF08334 Type II secretion system (T2SS), protein G JT727_21450 PF07963 Prokaryotic N-terminal methylation motif JT727_21455 PF07963 Prokaryotic N-terminal methylation motif JT727_21455 PF02501 Type II secretion system (T2SS), protein I JT727_21460 PF07963 Prokaryotic N-terminal methylation motif JT727_21460 PF11612 Type II secretion system (T2SS), protein J JT727_21465 PF03934 Type II secretion system (T2SS), protein K JT727_21470 PF05134 Type II secretion system (T2SS), protein L JT727_21470 PF12693 GspL periplasmic domain JT727_21475 PF04612 Type II secretion system (T2SS), protein M JT727_21480 PF01203 Type II secretion system (T2SS), protein N JT727_21485 PF06750 Bacterial Peptidase A24 N-terminal domain JT727_21485 PF01478 Type IV leader peptidase family JT727_21490 PF00271 Helicase conserved C-terminal domain JT727_21490 PF04408 Helicase associated domain (HA2) JT727_21490 PF00270 DEAD/DEAH box helicase JT727_21490 PF08482 ATP-dependent helicase C-terminal JT727_21495 PF02834 LigT like Phosphoesterase JT727_21500 PF03749 Sugar fermentation stimulation protein RE domain JT727_21500 PF17746 SfsA N-terminal OB domain JT727_21505 PF01258 Prokaryotic dksA/traR C4-type zinc finger JT727_21510 PF00749 tRNA synthetases class I (E and Q), catalytic domain JT727_21515 PF01743 Poly A polymerase head domain JT727_21515 PF12626 Polymerase A arginine-rich C-terminus JT727_21515 PF12627 Probable RNA and SrmB- binding site of polymerase A JT727_21520 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JT727_21525 PF02548 Ketopantoate hydroxymethyltransferase JT727_21530 PF02569 Pantoate-beta-alanine ligase JT727_21535 PF02261 Aspartate decarboxylase JT727_21540 PF01522 Polysaccharide deacetylase JT727_21545 PF03610 PTS system fructose IIA component JT727_21550 PF01061 ABC-2 type transporter JT727_21555 PF00005 ABC transporter JT727_21560 PF00484 Carbonic anhydrase JT727_21565 PF00156 Phosphoribosyl transferase domain JT727_21575 PF01011 PQQ enzyme repeat JT727_21580 PF00394 Multicopper oxidase JT727_21580 PF07731 Multicopper oxidase JT727_21580 PF07732 Multicopper oxidase JT727_21585 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JT727_21605 PF17284 Spermidine synthase tetramerisation domain JT727_21610 PF02675 S-adenosylmethionine decarboxylase JT727_21615 PF06062 Uncharacterised protein family (UPF0231) JT727_21620 PF11791 Aconitate B N-terminal domain JT727_21620 PF00330 Aconitase family (aconitate hydratase) JT727_21620 PF06434 Aconitate hydratase 2 N-terminus JT727_21625 PF11737 Protein of unknown function (DUF3300) JT727_21640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JT727_21640 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_21645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JT727_21645 PF00364 Biotin-requiring enzyme JT727_21645 PF02817 e3 binding domain JT727_21650 PF17831 Pyruvate dehydrogenase E1 component middle domain JT727_21650 PF00456 Transketolase, thiamine diphosphate binding domain JT727_21655 PF00392 Bacterial regulatory proteins, gntR family JT727_21655 PF07729 FCD domain JT727_21660 PF00324 Amino acid permease JT727_21670 PF04616 Glycosyl hydrolases family 43 JT727_21670 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JT727_21675 PF17113 Regulatory signalling modulator protein AmpE JT727_21680 PF01510 N-acetylmuramoyl-L-alanine amidase JT727_21685 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JT727_21685 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JT727_21690 PF07963 Prokaryotic N-terminal methylation motif JT727_21695 PF00437 Type II/IV secretion system protein JT727_21695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JT727_21700 PF00482 Type II secretion system (T2SS), protein F JT727_21705 PF00478 IMP dehydrogenase / GMP reductase domain JT727_21710 PF01121 Dephospho-CoA kinase JT727_21715 PF07072 Cell division protein JT727_21720 PF03884 DNA gyrase inhibitor YacG JT727_21725 PF00293 NUDIX domain JT727_21730 PF01043 SecA preprotein cross-linking domain JT727_21730 PF07517 SecA DEAD-like domain JT727_21730 PF02810 SEC-C motif JT727_21730 PF07516 SecA Wing and Scaffold domain JT727_21735 PF06558 Secretion monitor precursor protein (SecM) JT727_21740 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JT727_21745 PF12327 FtsZ family, C-terminal domain JT727_21745 PF00091 Tubulin/FtsZ family, GTPase domain JT727_21750 PF02491 SHS2 domain inserted in FTSA JT727_21755 PF03799 Cell division protein FtsQ JT727_21755 PF08478 POTRA domain, FtsQ-type JT727_21760 PF07478 D-ala D-ala ligase C-terminus JT727_21760 PF01820 D-ala D-ala ligase N-terminus JT727_21765 PF02875 Mur ligase family, glutamate ligase domain JT727_21765 PF08245 Mur ligase middle domain JT727_21765 PF01225 Mur ligase family, catalytic domain JT727_21770 PF03033 Glycosyltransferase family 28 N-terminal domain JT727_21770 PF04101 Glycosyltransferase family 28 C-terminal domain JT727_21775 PF01098 Cell cycle protein JT727_21780 PF08245 Mur ligase middle domain JT727_21780 PF02875 Mur ligase family, glutamate ligase domain JT727_21785 PF00953 Glycosyl transferase family 4 JT727_21785 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JT727_21790 PF02875 Mur ligase family, glutamate ligase domain JT727_21790 PF01225 Mur ligase family, catalytic domain JT727_21790 PF08245 Mur ligase middle domain JT727_21795 PF01225 Mur ligase family, catalytic domain JT727_21795 PF02875 Mur ligase family, glutamate ligase domain JT727_21795 PF08245 Mur ligase middle domain JT727_21800 PF00905 Penicillin binding protein transpeptidase domain JT727_21800 PF03717 Penicillin-binding Protein dimerisation domain JT727_21805 PF04999 Cell division protein FtsL JT727_21810 PF01795 MraW methylase family JT727_21815 PF02381 MraZ protein, putative antitoxin-like JT727_21820 PF00356 Bacterial regulatory proteins, lacI family JT727_21820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT727_21825 PF10369 Small subunit of acetolactate synthase JT727_21830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_21830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_21830 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_21835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_21835 PF03466 LysR substrate binding domain JT727_21845 PF00682 HMGL-like JT727_21845 PF08502 LeuA allosteric (dimerisation) domain JT727_21850 PF00180 Isocitrate/isopropylmalate dehydrogenase JT727_21855 PF00330 Aconitase family (aconitate hydratase) JT727_21860 PF00694 Aconitase C-terminal domain JT727_21865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT727_21865 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_21870 PF08501 Shikimate dehydrogenase substrate binding domain JT727_21870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT727_21875 PF07690 Major Facilitator Superfamily JT727_21880 PF01487 Type I 3-dehydroquinase JT727_21890 PF07690 Major Facilitator Superfamily JT727_21895 PF07690 Major Facilitator Superfamily JT727_21905 PF12793 Sugar transport-related sRNA regulator N-term JT727_21905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT727_21915 PF00528 Binding-protein-dependent transport system inner membrane component JT727_21920 PF00005 ABC transporter JT727_21925 PF09335 SNARE associated Golgi protein JT727_21930 PF12833 Helix-turn-helix domain JT727_21930 PF02311 AraC-like ligand binding domain JT727_21935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_21940 PF11762 L-arabinose isomerase C-terminal domain JT727_21940 PF02610 L-arabinose isomerase JT727_21945 PF00596 Class II Aldolase and Adducin N-terminal domain JT727_21950 PF03104 DNA polymerase family B, exonuclease domain JT727_21950 PF00136 DNA polymerase family B JT727_21955 PF00271 Helicase conserved C-terminal domain JT727_21955 PF12137 RNA polymerase recycling family C-terminal JT727_21955 PF00176 SNF2 family N-terminal domain JT727_21955 PF18339 RapA N-terminal Tudor like domain 1 JT727_21955 PF18337 RapA N-terminal Tudor like domain JT727_21960 PF00849 RNA pseudouridylate synthase JT727_21965 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JT727_21970 PF03390 2-hydroxycarboxylate transporter family JT727_21975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_21975 PF17203 Single cache domain 3 JT727_21980 PF12431 Transcriptional regulator JT727_21980 PF00072 Response regulator receiver domain JT727_21985 PF05099 Tellurite resistance protein TerB JT727_21985 PF00226 DnaJ domain JT727_21990 PF03968 OstA-like protein JT727_21990 PF04453 LPS transport system D JT727_21995 PF00639 PPIC-type PPIASE domain JT727_21995 PF09312 SurA N-terminal domain JT727_22000 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JT727_22005 PF00398 Ribosomal RNA adenine dimethylase JT727_22010 PF04379 ApaG domain JT727_22015 PF00149 Calcineurin-like phosphoesterase JT727_22020 PF00186 Dihydrofolate reductase JT727_22025 PF02254 TrkA-N domain JT727_22025 PF00999 Sodium/hydrogen exchanger family JT727_22030 PF02525 Flavodoxin-like fold JT727_22035 PF06004 Bacterial protein of unknown function (DUF903) JT727_22040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JT727_22040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JT727_22040 PF02142 MGS-like domain JT727_22045 PF00117 Glutamine amidotransferase class-I JT727_22045 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JT727_22050 PF01113 Dihydrodipicolinate reductase, N-terminus JT727_22050 PF05173 Dihydrodipicolinate reductase, C-terminus JT727_22055 PF02272 DHHA1 domain JT727_22055 PF01411 tRNA synthetases class II (A) JT727_22055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JT727_22060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_22060 PF03466 LysR substrate binding domain JT727_22065 PF05656 Protein of unknown function (DUF805) JT727_22070 PF01156 Inosine-uridine preferring nucleoside hydrolase JT727_22075 PF02401 LytB protein JT727_22080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT727_22085 PF01252 Signal peptidase (SPase) II JT727_22090 PF06827 Zinc finger found in FPG and IleRS JT727_22090 PF00133 tRNA synthetases class I (I, L, M and V) JT727_22090 PF08264 Anticodon-binding domain of tRNA JT727_22095 PF01687 Riboflavin kinase JT727_22095 PF06574 FAD synthetase JT727_22100 PF01649 Ribosomal protein S20 JT727_22105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_22105 PF03466 LysR substrate binding domain JT727_22110 PF06965 Na+/H+ antiporter 1 JT727_22115 PF00684 DnaJ central domain JT727_22115 PF01556 DnaJ C terminal domain JT727_22115 PF00226 DnaJ domain JT727_22120 PF00012 Hsp70 protein JT727_22125 PF10807 Protein of unknown function (DUF2541) JT727_22130 PF13099 Domain of unknown function (DUF3944) JT727_22130 PF03981 Ubiquinol-cytochrome C chaperone JT727_22135 PF01184 GPR1/FUN34/yaaH family JT727_22140 PF07690 Major Facilitator Superfamily JT727_22145 PF00994 Probable molybdopterin binding domain JT727_22150 PF00923 Transaldolase/Fructose-6-phosphate aldolase JT727_22155 PF01235 Sodium:alanine symporter family JT727_22160 PF03883 Peroxide stress protein YaaA JT727_22170 PF00291 Pyridoxal-phosphate dependent enzyme JT727_22170 PF14821 Threonine synthase N terminus JT727_22175 PF08544 GHMP kinases C terminal JT727_22175 PF00288 GHMP kinases N terminal domain JT727_22180 PF00696 Amino acid kinase family JT727_22180 PF01842 ACT domain JT727_22180 PF13840 ACT domain JT727_22180 PF00742 Homoserine dehydrogenase JT727_22180 PF03447 Homoserine dehydrogenase, NAD binding domain JT727_22185 PF08254 Threonine leader peptide JT727_22190 PF00588 SpoU rRNA Methylase family JT727_22200 PF00486 Transcriptional regulatory protein, C terminal JT727_22200 PF00072 Response regulator receiver domain JT727_22205 PF06123 Inner membrane protein CreD JT727_22210 PF00512 His Kinase A (phospho-acceptor) domain JT727_22210 PF00672 HAMP domain JT727_22210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_22215 PF00072 Response regulator receiver domain JT727_22215 PF00486 Transcriptional regulatory protein, C terminal JT727_22220 PF05981 CreA protein JT727_22225 PF06445 GyrI-like small molecule binding domain JT727_22225 PF12833 Helix-turn-helix domain JT727_22230 PF00300 Histidine phosphatase superfamily (branch 1) JT727_22235 PF01931 Protein of unknown function DUF84 JT727_22240 PF01371 Trp repressor protein JT727_22245 PF01464 Transglycosylase SLT domain JT727_22245 PF14718 Soluble lytic murein transglycosylase L domain JT727_22250 PF00005 ABC transporter JT727_22250 PF12848 ABC transporter JT727_22255 PF13521 AAA domain JT727_22255 PF01381 Helix-turn-helix JT727_22260 PF18073 Rubredoxin metal binding domain JT727_22265 PF18429 Domain of unknown function (DUF5609) JT727_22270 PF10144 Bacterial virulence factor haemolysin JT727_22275 PF10437 Bacterial lipoate protein ligase C-terminus JT727_22275 PF03099 Biotin/lipoate A/B protein ligase family JT727_22280 PF01048 Phosphorylase superfamily JT727_22285 PF01676 Metalloenzyme superfamily JT727_22290 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JT727_22290 PF02885 Glycosyl transferase family, helical bundle domain JT727_22290 PF00591 Glycosyl transferase family, a/b domain JT727_22295 PF01791 DeoC/LacD family aldolase JT727_22300 PF01773 Na+ dependent nucleoside transporter N-terminus JT727_22300 PF07662 Na+ dependent nucleoside transporter C-terminus JT727_22300 PF07670 Nucleoside recognition JT727_22305 PF01026 TatD related DNase JT727_22310 PF01734 Patatin-like phospholipase JT727_22315 PF07043 Protein of unknown function (DUF1328) JT727_22320 PF04972 BON domain JT727_22325 PF16658 Class II release factor RF3, C-terminal domain JT727_22325 PF00009 Elongation factor Tu GTP binding domain JT727_22325 PF03144 Elongation factor Tu domain 2 JT727_22330 PF13419 Haloacid dehalogenase-like hydrolase JT727_22335 PF00583 Acetyltransferase (GNAT) family JT727_22340 PF03603 DNA polymerase III psi subunit JT727_22345 PF05175 Methyltransferase small domain JT727_22345 PF08468 Methyltransferase small domain N-terminal JT727_22365 PF07256 Protein of unknown function (DUF1435) JT727_22375 PF00990 Diguanylate cyclase, GGDEF domain JT727_22380 PF06276 Ferric iron reductase FhuF-like transporter JT727_22380 PF11575 FhuF 2Fe-2S C-terminal domain JT727_22385 PF02378 Phosphotransferase system, EIIC JT727_22385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_22390 PF04073 Aminoacyl-tRNA editing domain JT727_22395 PF00196 Bacterial regulatory proteins, luxR family JT727_22400 PF00196 Bacterial regulatory proteins, luxR family JT727_22410 PF01494 FAD binding domain JT727_22415 PF06738 Putative threonine/serine exporter JT727_22420 PF12821 Threonine/Serine exporter, ThrE JT727_22425 PF17948 DnaT DNA-binding domain JT727_22430 PF01695 IstB-like ATP binding protein JT727_22435 PF10696 Protein of unknown function (DUF2501) JT727_22440 PF00884 Sulfatase JT727_22445 PF04754 Putative transposase, YhgA-like JT727_22450 PF01380 SIS domain JT727_22455 PF01380 SIS domain JT727_22460 PF03613 PTS system mannose/fructose/sorbose family IID component JT727_22465 PF03609 PTS system sorbose-specific iic component JT727_22470 PF03830 PTS system sorbose subfamily IIB component JT727_22475 PF03610 PTS system fructose IIA component JT727_22475 PF03830 PTS system sorbose subfamily IIB component JT727_22480 PF00158 Sigma-54 interaction domain JT727_22480 PF00874 PRD domain JT727_22480 PF03610 PTS system fructose IIA component JT727_22485 PF08125 Mannitol dehydrogenase C-terminal domain JT727_22485 PF01232 Mannitol dehydrogenase Rossmann domain JT727_22490 PF08240 Alcohol dehydrogenase GroES-like domain JT727_22490 PF00107 Zinc-binding dehydrogenase JT727_22495 PF07729 FCD domain JT727_22495 PF00392 Bacterial regulatory proteins, gntR family JT727_22500 PF07690 Major Facilitator Superfamily JT727_22505 PF00814 Glycoprotease family JT727_22505 PF00583 Acetyltransferase (GNAT) family JT727_22510 PF00583 Acetyltransferase (GNAT) family JT727_22515 PF01418 Helix-turn-helix domain, rpiR family JT727_22515 PF01380 SIS domain JT727_22520 PF01081 KDPG and KHG aldolase JT727_22525 PF05035 2-keto-3-deoxy-galactonokinase JT727_22540 PF07969 Amidohydrolase family JT727_22555 PF02615 Malate/L-lactate dehydrogenase JT727_22565 PF01047 MarR family JT727_22575 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT727_22580 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT727_22585 PF00171 Aldehyde dehydrogenase family JT727_22590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT727_22595 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JT727_22600 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT727_22605 PF03328 HpcH/HpaI aldolase/citrate lyase family JT727_22610 PF07690 Major Facilitator Superfamily JT727_22615 PF12833 Helix-turn-helix domain JT727_22620 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JT727_22620 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JT727_22625 PF01613 Flavin reductase like domain JT727_22640 PF02554 Carbon starvation protein CstA JT727_22640 PF13722 5TM C-terminal transporter carbon starvation CstA JT727_22645 PF04328 Selenoprotein, putative JT727_22650 PF07683 Cobalamin synthesis protein cobW C-terminal domain JT727_22650 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT727_22660 PF00171 Aldehyde dehydrogenase family JT727_22665 PF04754 Putative transposase, YhgA-like JT727_22670 PF12833 Helix-turn-helix domain JT727_22670 PF02311 AraC-like ligand binding domain JT727_22680 PF04286 Protein of unknown function (DUF445) JT727_22685 PF07690 Major Facilitator Superfamily JT727_22695 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JT727_22700 PF01869 BadF/BadG/BcrA/BcrD ATPase family JT727_22705 PF11823 Protein of unknown function (DUF3343) JT727_22715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_22715 PF00529 HlyD membrane-fusion protein of T1SS JT727_22725 PF06568 Domain of unknown function (DUF1127) JT727_22730 PF00392 Bacterial regulatory proteins, gntR family JT727_22730 PF00155 Aminotransferase class I and II JT727_22735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT727_22740 PF03466 LysR substrate binding domain JT727_22740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_22745 PF02525 Flavodoxin-like fold JT727_22750 PF02653 Branched-chain amino acid transport system / permease component JT727_22755 PF02653 Branched-chain amino acid transport system / permease component JT727_22760 PF00005 ABC transporter JT727_22765 PF13407 Periplasmic binding protein domain JT727_22770 PF00579 tRNA synthetases class I (W and Y) JT727_22775 PF00990 Diguanylate cyclase, GGDEF domain JT727_22780 PF13533 Biotin-lipoyl like JT727_22785 PF00005 ABC transporter JT727_22820 PF08007 Cupin superfamily protein JT727_22835 PF00672 HAMP domain JT727_22835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_22835 PF00512 His Kinase A (phospho-acceptor) domain JT727_22840 PF00072 Response regulator receiver domain JT727_22840 PF00486 Transcriptional regulatory protein, C terminal JT727_22845 PF02321 Outer membrane efflux protein JT727_22850 PF11604 Copper binding periplasmic protein CusF JT727_22855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_22855 PF00529 HlyD membrane-fusion protein of T1SS JT727_22860 PF00873 AcrB/AcrD/AcrF family JT727_22870 PF08212 Lipocalin-like domain JT727_22875 PF13411 MerR HTH family regulatory protein JT727_22885 PF00106 short chain dehydrogenase JT727_22920 PF08349 Protein of unknown function (DUF1722) JT727_22925 PF02264 LamB porin JT727_22940 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JT727_22940 PF04616 Glycosyl hydrolases family 43 JT727_22960 PF00535 Glycosyl transferase family 2 JT727_23010 PF14338 Mrr N-terminal domain JT727_23010 PF04471 Restriction endonuclease JT727_23030 PF13737 Transposase DDE domain JT727_23045 PF13356 Arm DNA-binding domain JT727_23045 PF00589 Phage integrase family JT727_23085 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_23085 PF13192 Thioredoxin domain JT727_23090 PF02082 Transcriptional regulator JT727_23105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JT727_23105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JT727_23110 PF12833 Helix-turn-helix domain JT727_23110 PF01965 DJ-1/PfpI family JT727_23115 PF13737 Transposase DDE domain JT727_23125 PF07690 Major Facilitator Superfamily JT727_23130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JT727_23130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JT727_23135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_23135 PF03466 LysR substrate binding domain JT727_23155 PF07690 Major Facilitator Superfamily JT727_23155 PF00083 Sugar (and other) transporter JT727_23160 PF00171 Aldehyde dehydrogenase family JT727_23165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT727_23165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT727_23170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_23170 PF03466 LysR substrate binding domain JT727_23180 PF00484 Carbonic anhydrase JT727_23185 PF00916 Sulfate permease family JT727_23185 PF01740 STAS domain JT727_23190 PF08240 Alcohol dehydrogenase GroES-like domain JT727_23190 PF00107 Zinc-binding dehydrogenase JT727_23195 PF00528 Binding-protein-dependent transport system inner membrane component JT727_23200 PF00528 Binding-protein-dependent transport system inner membrane component JT727_23205 PF00149 Calcineurin-like phosphoesterase JT727_23210 PF00005 ABC transporter JT727_23210 PF17912 MalK OB fold domain JT727_23215 PF13416 Bacterial extracellular solute-binding protein JT727_23220 PF01261 Xylose isomerase-like TIM barrel JT727_23225 PF01261 Xylose isomerase-like TIM barrel JT727_23230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT727_23230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT727_23235 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_23235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_23235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_23240 PF00294 pfkB family carbohydrate kinase JT727_23245 PF01380 SIS domain JT727_23245 PF01418 Helix-turn-helix domain, rpiR family JT727_23245 PF02685 Glucokinase JT727_23250 PF04962 KduI/IolB family JT727_23255 PF00171 Aldehyde dehydrogenase family JT727_23265 PF05872 Bacterial protein of unknown function (DUF853) JT727_23270 PF03739 Lipopolysaccharide export system permease LptF/LptG JT727_23275 PF03739 Lipopolysaccharide export system permease LptF/LptG JT727_23280 PF00883 Cytosol aminopeptidase family, catalytic domain JT727_23280 PF02789 Cytosol aminopeptidase family, N-terminal domain JT727_23285 PF04364 DNA polymerase III chi subunit, HolC JT727_23290 PF08264 Anticodon-binding domain of tRNA JT727_23290 PF10458 Valyl tRNA synthetase tRNA binding arm JT727_23290 PF00133 tRNA synthetases class I (I, L, M and V) JT727_23295 PF00583 Acetyltransferase (GNAT) family JT727_23300 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JT727_23305 PF06877 Regulator of ribonuclease activity B JT727_23310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JT727_23310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JT727_23315 PF04074 YhcH/YjgK/YiaL JT727_23325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JT727_23325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JT727_23330 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JT727_23330 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JT727_23335 PF01042 Endoribonuclease L-PSP JT727_23340 PF00690 Cation transporter/ATPase, N-terminus JT727_23340 PF00689 Cation transporting ATPase, C-terminus JT727_23345 PF00356 Bacterial regulatory proteins, lacI family JT727_23350 PF02378 Phosphotransferase system, EIIC JT727_23350 PF00367 phosphotransferase system, EIIB JT727_23355 PF00128 Alpha amylase, catalytic domain JT727_23355 PF11941 Domain of unknown function (DUF3459) JT727_23360 PF02378 Phosphotransferase system, EIIC JT727_23365 PF02056 Family 4 glycosyl hydrolase JT727_23365 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT727_23370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_23385 PF03477 ATP cone domain JT727_23385 PF13597 Anaerobic ribonucleoside-triphosphate reductase JT727_23395 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JT727_23400 PF04221 RelB antitoxin JT727_23405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_23405 PF00874 PRD domain JT727_23405 PF05043 Mga helix-turn-helix domain JT727_23405 PF08279 HTH domain JT727_23410 PF10282 Lactonase, 7-bladed beta-propeller JT727_23415 PF07071 KDGP aldolase JT727_23420 PF03841 L-seryl-tRNA selenium transferase JT727_23425 PF01979 Amidohydrolase family JT727_23460 PF07361 Cytochrome b562 JT727_23465 PF01523 Putative modulator of DNA gyrase JT727_23470 PF04751 Protein of unknown function (DUF615) JT727_23495 PF02875 Mur ligase family, glutamate ligase domain JT727_23495 PF08245 Mur ligase middle domain JT727_23495 PF01225 Mur ligase family, catalytic domain JT727_23500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JT727_23505 PF02653 Branched-chain amino acid transport system / permease component JT727_23510 PF02653 Branched-chain amino acid transport system / permease component JT727_23515 PF00005 ABC transporter JT727_23520 PF13407 Periplasmic binding protein domain JT727_23525 PF00719 Inorganic pyrophosphatase JT727_23535 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JT727_23540 PF04357 TamB, inner membrane protein subunit of TAM complex JT727_23545 PF01103 Surface antigen JT727_23545 PF07244 Surface antigen variable number repeat JT727_23545 PF17243 POTRA domain TamA domain 1 JT727_23550 PF01625 Peptide methionine sulfoxide reductase JT727_23555 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JT727_23560 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JT727_23565 PF00682 HMGL-like JT727_23565 PF00364 Biotin-requiring enzyme JT727_23565 PF02436 Conserved carboxylase domain JT727_23570 PF04277 Oxaloacetate decarboxylase, gamma chain JT727_23575 PF01566 Natural resistance-associated macrophage protein JT727_23580 PF00701 Dihydrodipicolinate synthetase family JT727_23585 PF00356 Bacterial regulatory proteins, lacI family JT727_23590 PF06178 Oligogalacturonate-specific porin protein (KdgM) JT727_23595 PF03471 Transporter associated domain JT727_23595 PF01595 Cyclin M transmembrane N-terminal domain JT727_23595 PF00571 CBS domain JT727_23600 PF01306 LacY proton/sugar symporter JT727_23610 PF12833 Helix-turn-helix domain JT727_23610 PF02311 AraC-like ligand binding domain JT727_23615 PF06526 Protein of unknown function (DUF1107) JT727_23620 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JT727_23625 PF00459 Inositol monophosphatase family JT727_23630 PF02872 5'-nucleotidase, C-terminal domain JT727_23630 PF00149 Calcineurin-like phosphoesterase JT727_23635 PF01638 HxlR-like helix-turn-helix JT727_23640 PF05368 NmrA-like family JT727_23645 PF12833 Helix-turn-helix domain JT727_23650 PF00892 EamA-like transporter family JT727_23655 PF04405 Domain of Unknown function (DUF542) JT727_23655 PF01814 Hemerythrin HHE cation binding domain JT727_23660 PF00324 Amino acid permease JT727_23665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JT727_23665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT727_23670 PF08525 Opacity-associated protein A N-terminal motif JT727_23670 PF04225 Opacity-associated protein A LysM-like domain JT727_23675 PF01281 Ribosomal protein L9, N-terminal domain JT727_23675 PF03948 Ribosomal protein L9, C-terminal domain JT727_23680 PF01084 Ribosomal protein S18 JT727_23685 PF00436 Single-strand binding protein family JT727_23690 PF01250 Ribosomal protein S6 JT727_23695 PF07338 Protein of unknown function (DUF1471) JT727_23700 PF07690 Major Facilitator Superfamily JT727_23705 PF00596 Class II Aldolase and Adducin N-terminal domain JT727_23710 PF01261 Xylose isomerase-like TIM barrel JT727_23715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JT727_23720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT727_23725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_23730 PF03611 PTS system sugar-specific permease component JT727_23740 PF08220 DeoR-like helix-turn-helix domain JT727_23740 PF00455 DeoR C terminal sensor domain JT727_23745 PF00326 Prolyl oligopeptidase family JT727_23750 PF07338 Protein of unknown function (DUF1471) JT727_23755 PF07338 Protein of unknown function (DUF1471) JT727_23760 PF02770 Acyl-CoA dehydrogenase, middle domain JT727_23760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JT727_23760 PF18158 Adaptive response protein AidB N-terminal domain JT727_23765 PF08032 RNA 2'-O ribose methyltransferase substrate binding JT727_23765 PF00588 SpoU rRNA Methylase family JT727_23770 PF08461 Ribonuclease R winged-helix domain JT727_23770 PF17876 Cold shock domain JT727_23770 PF08206 Ribonuclease B OB domain JT727_23770 PF00773 RNB domain JT727_23770 PF00575 S1 RNA binding domain JT727_23775 PF02082 Transcriptional regulator JT727_23780 PF00709 Adenylosuccinate synthetase JT727_23785 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JT727_23795 PF01145 SPFH domain / Band 7 family JT727_23800 PF01145 SPFH domain / Band 7 family JT727_23800 PF12221 Bacterial membrane protein N terminal JT727_23805 PF13167 GTP-binding GTPase N-terminal JT727_23805 PF01926 50S ribosome-binding GTPase JT727_23805 PF16360 GTP-binding GTPase Middle Region JT727_23810 PF17209 Hfq protein JT727_23820 PF01119 DNA mismatch repair protein, C-terminal domain JT727_23820 PF08676 MutL C terminal dimerisation domain JT727_23825 PF01520 N-acetylmuramoyl-L-alanine amidase JT727_23830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JT727_23835 PF01256 Carbohydrate kinase JT727_23835 PF03853 YjeF-related protein N-terminus JT727_23840 PF08331 Domain of unknown function (DUF1730) JT727_23860 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT727_23865 PF00929 Exonuclease JT727_23870 PF03193 RsgA GTPase JT727_23875 PF02666 Phosphatidylserine decarboxylase JT727_23880 PF00924 Mechanosensitive ion channel JT727_23880 PF12795 Mechanosensitive ion channel porin domain JT727_23880 PF12794 Mechanosensitive ion channel inner membrane domain 1 JT727_23885 PF13520 Amino acid permease JT727_23890 PF00152 tRNA synthetases class II (D, K and N) JT727_23895 PF02910 Fumarate reductase flavoprotein C-term JT727_23895 PF00890 FAD binding domain JT727_23900 PF13085 2Fe-2S iron-sulfur cluster binding domain JT727_23900 PF13183 4Fe-4S dicluster domain JT727_23905 PF02300 Fumarate reductase subunit C JT727_23910 PF02313 Fumarate reductase subunit D JT727_23915 PF08212 Lipocalin-like domain JT727_23920 PF00893 Small Multidrug Resistance protein JT727_23925 PF08085 Entericidin EcnA/B family JT727_23935 PF08207 Elongation factor P (EF-P) KOW-like domain JT727_23935 PF09285 Elongation factor P, C-terminal JT727_23935 PF01132 Elongation factor P (EF-P) OB domain JT727_23940 PF04055 Radical SAM superfamily JT727_23955 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_23955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_23960 PF13954 PapC N-terminal domain JT727_23960 PF13953 PapC C-terminal domain JT727_23960 PF00577 Outer membrane usher protein JT727_23995 PF00529 HlyD membrane-fusion protein of T1SS JT727_23995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT727_24000 PF00664 ABC transporter transmembrane region JT727_24000 PF00005 ABC transporter JT727_24000 PF03412 Peptidase C39 family JT727_24010 PF13698 Domain of unknown function (DUF4156) JT727_24015 PF00118 TCP-1/cpn60 chaperonin family JT727_24020 PF00166 Chaperonin 10 Kd subunit JT727_24025 PF13520 Amino acid permease JT727_24030 PF04186 FxsA cytoplasmic membrane protein JT727_24035 PF00206 Lyase JT727_24035 PF10415 Fumarase C C-terminus JT727_24040 PF03605 Anaerobic c4-dicarboxylate membrane transporter JT727_24045 PF03091 CutA1 divalent ion tolerance protein JT727_24050 PF02683 Cytochrome C biogenesis protein transmembrane region JT727_24050 PF11412 Disulphide bond corrector protein DsbC JT727_24110 PF14883 Hypothetical glycosyl hydrolase family 13 JT727_24110 PF01522 Polysaccharide deacetylase JT727_24115 PF00535 Glycosyl transferase family 2 JT727_24130 PF03741 Integral membrane protein TerC family JT727_24140 PF00226 DnaJ domain JT727_24140 PF01556 DnaJ C terminal domain JT727_24155 PF06406 StbA protein JT727_24170 PF02056 Family 4 glycosyl hydrolase JT727_24170 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT727_24175 PF12833 Helix-turn-helix domain JT727_24180 PF00083 Sugar (and other) transporter JT727_24180 PF08946 Osmosensory transporter coiled coil JT727_24185 PF03831 PhnA domain JT727_24185 PF08274 PhnA Zinc-Ribbon JT727_24190 PF06983 3-demethylubiquinone-9 3-methyltransferase JT727_24195 PF07702 UTRA domain JT727_24195 PF00392 Bacterial regulatory proteins, gntR family JT727_24200 PF06754 Phosphonate metabolism protein PhnG JT727_24205 PF05845 Bacterial phosphonate metabolism protein (PhnH) JT727_24210 PF05861 Bacterial phosphonate metabolism protein (PhnI) JT727_24215 PF06007 Phosphonate metabolism protein PhnJ JT727_24220 PF00005 ABC transporter JT727_24225 PF00005 ABC transporter JT727_24230 PF07969 Amidohydrolase family JT727_24240 PF12706 Beta-lactamase superfamily domain JT727_24250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_24250 PF00072 Response regulator receiver domain JT727_24250 PF13426 PAS domain JT727_24255 PF00005 ABC transporter JT727_24260 PF02653 Branched-chain amino acid transport system / permease component JT727_24265 PF13407 Periplasmic binding protein domain JT727_24275 PF00486 Transcriptional regulatory protein, C terminal JT727_24275 PF00072 Response regulator receiver domain JT727_24285 PF08238 Sel1 repeat JT727_24290 PF00375 Sodium:dicarboxylate symporter family JT727_24300 PF16177 Acetyl-coenzyme A synthetase N-terminus JT727_24300 PF13193 AMP-binding enzyme C-terminal domain JT727_24300 PF00501 AMP-binding enzyme JT727_24305 PF04341 Protein of unknown function, DUF485 JT727_24310 PF00474 Sodium:solute symporter family JT727_24325 PF00577 Outer membrane usher protein JT727_24325 PF13953 PapC C-terminal domain JT727_24325 PF13954 PapC N-terminal domain JT727_24330 PF02753 Pili assembly chaperone PapD, C-terminal domain JT727_24330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT727_24335 PF00419 Fimbrial protein JT727_24340 PF04172 LrgB-like family JT727_24345 PF03788 LrgA family JT727_24350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_24350 PF03466 LysR substrate binding domain JT727_24355 PF00999 Sodium/hydrogen exchanger family JT727_24360 PF00860 Permease family JT727_24365 PF02798 Glutathione S-transferase, N-terminal domain JT727_24365 PF00043 Glutathione S-transferase, C-terminal domain JT727_24370 PF00376 MerR family regulatory protein JT727_24370 PF09278 MerR, DNA binding JT727_24375 PF12833 Helix-turn-helix domain JT727_24380 PF12792 CSS motif domain associated with EAL JT727_24380 PF00563 EAL domain JT727_24385 PF15940 Family of unknown function JT727_24390 PF00528 Binding-protein-dependent transport system inner membrane component JT727_24405 PF00005 ABC transporter JT727_24405 PF08402 TOBE domain JT727_24410 PF00753 Metallo-beta-lactamase superfamily JT727_24410 PF12706 Beta-lactamase superfamily domain JT727_24415 PF00356 Bacterial regulatory proteins, lacI family JT727_24420 PF00459 Inositol monophosphatase family JT727_24430 PF07244 Surface antigen variable number repeat JT727_24430 PF01103 Surface antigen JT727_24440 PF07519 Tannase and feruloyl esterase JT727_24445 PF12833 Helix-turn-helix domain JT727_24450 PF07715 TonB-dependent Receptor Plug Domain JT727_24450 PF00593 TonB dependent receptor JT727_24455 PF01464 Transglycosylase SLT domain JT727_24460 PF00436 Single-strand binding protein family JT727_24465 PF17760 UvrA interaction domain JT727_24465 PF00005 ABC transporter JT727_24465 PF17755 UvrA DNA-binding domain JT727_24470 PF04237 YjbR JT727_24475 PF01894 Uncharacterised protein family UPF0047 JT727_24480 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JT727_24485 PF00155 Aminotransferase class I and II JT727_24490 PF00842 Alanine racemase, C-terminal domain JT727_24490 PF01168 Alanine racemase, N-terminal domain JT727_24495 PF03796 DnaB-like helicase C terminal domain JT727_24495 PF00772 DnaB-like helicase N terminal domain JT727_24500 PF00107 Zinc-binding dehydrogenase JT727_24500 PF08240 Alcohol dehydrogenase GroES-like domain JT727_24505 PF09583 Phage shock protein G (Phageshock_PspG) JT727_24510 PF01207 Dihydrouridine synthase (Dus) JT727_24520 PF01475 Ferric uptake regulator family JT727_24525 PF05532 CsbD-like JT727_24535 PF01554 MatE JT727_24540 PF01726 LexA DNA binding domain JT727_24540 PF00717 Peptidase S24-like JT727_24545 PF01219 Prokaryotic diacylglycerol kinase JT727_24550 PF01553 Acyltransferase JT727_24555 PF01040 UbiA prenyltransferase family JT727_24560 PF04345 Chorismate lyase JT727_24565 PF07148 Maltose operon periplasmic protein precursor (MalM) JT727_24570 PF02264 LamB porin JT727_24575 PF17912 MalK OB fold domain JT727_24575 PF00005 ABC transporter JT727_24580 PF01547 Bacterial extracellular solute-binding protein JT727_24585 PF14785 Maltose transport system permease protein MalF P2 domain JT727_24585 PF00528 Binding-protein-dependent transport system inner membrane component JT727_24590 PF00528 Binding-protein-dependent transport system inner membrane component JT727_24595 PF06146 Phosphate-starvation-inducible E JT727_24600 PF03313 Serine dehydratase alpha chain JT727_24615 PF01042 Endoribonuclease L-PSP JT727_24625 PF14602 Hexapeptide repeat of succinyl-transferase JT727_24625 PF12804 MobA-like NTP transferase domain JT727_24625 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_24630 PF00342 Phosphoglucose isomerase JT727_24635 PF00696 Amino acid kinase family JT727_24635 PF01842 ACT domain JT727_24640 PF01758 Sodium Bile acid symporter family JT727_24645 PF11656 YjbD family (DUF3811) JT727_24650 PF00849 RNA pseudouridylate synthase JT727_24650 PF01479 S4 domain JT727_24655 PF03575 Peptidase family S51 JT727_24660 PF02690 Na+/Pi-cotransporter JT727_24665 PF02607 B12 binding domain JT727_24665 PF02574 Homocysteine S-methyltransferase JT727_24665 PF00809 Pterin binding enzyme JT727_24665 PF02310 B12 binding domain JT727_24665 PF02965 Vitamin B12 dependent methionine synthase, activation domain JT727_24670 PF01614 Bacterial transcriptional regulator JT727_24670 PF09339 IclR helix-turn-helix domain JT727_24675 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JT727_24680 PF00463 Isocitrate lyase family JT727_24685 PF01274 Malate synthase JT727_24690 PF04204 Homoserine O-succinyltransferase JT727_24695 PF13673 Acetyltransferase (GNAT) domain JT727_24720 PF02142 MGS-like domain JT727_24720 PF01808 AICARFT/IMPCHase bienzyme JT727_24725 PF02844 Phosphoribosylglycinamide synthetase, N domain JT727_24725 PF02843 Phosphoribosylglycinamide synthetase, C domain JT727_24725 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JT727_24730 PF00158 Sigma-54 interaction domain JT727_24730 PF02954 Bacterial regulatory protein, Fis family JT727_24730 PF00072 Response regulator receiver domain JT727_24735 PF00512 His Kinase A (phospho-acceptor) domain JT727_24735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_24740 PF13801 Heavy-metal resistance JT727_24745 PF07356 Protein of unknown function (DUF1481) JT727_24750 PF00216 Bacterial DNA-binding protein JT727_24755 PF04222 Protein of unknown function (DUF416) JT727_24760 PF04493 Endonuclease V JT727_24765 PF01208 Uroporphyrinogen decarboxylase (URO-D) JT727_24770 PF00293 NUDIX domain JT727_24770 PF09297 NADH pyrophosphatase zinc ribbon domain JT727_24775 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JT727_24780 PF01964 Radical SAM ThiC family JT727_24780 PF13667 ThiC-associated domain JT727_24785 PF02581 Thiamine monophosphate synthase JT727_24790 PF00899 ThiF family JT727_24795 PF02597 ThiS family JT727_24800 PF05690 Thiazole biosynthesis protein ThiG JT727_24805 PF04055 Radical SAM superfamily JT727_24805 PF06968 Biotin and Thiamin Synthesis associated domain JT727_24810 PF00990 Diguanylate cyclase, GGDEF domain JT727_24815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT727_24820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT727_24825 PF03605 Anaerobic c4-dicarboxylate membrane transporter JT727_24830 PF04997 RNA polymerase Rpb1, domain 1 JT727_24830 PF04983 RNA polymerase Rpb1, domain 3 JT727_24830 PF04998 RNA polymerase Rpb1, domain 5 JT727_24830 PF05000 RNA polymerase Rpb1, domain 4 JT727_24830 PF00623 RNA polymerase Rpb1, domain 2 JT727_24835 PF10385 RNA polymerase beta subunit external 1 domain JT727_24835 PF04561 RNA polymerase Rpb2, domain 2 JT727_24835 PF04560 RNA polymerase Rpb2, domain 7 JT727_24835 PF04565 RNA polymerase Rpb2, domain 3 JT727_24835 PF04563 RNA polymerase beta subunit JT727_24835 PF00562 RNA polymerase Rpb2, domain 6 JT727_24840 PF16320 Ribosomal protein L7/L12 dimerisation domain JT727_24840 PF00542 Ribosomal protein L7/L12 C-terminal domain JT727_24845 PF00466 Ribosomal protein L10 JT727_24850 PF00687 Ribosomal protein L1p/L10e family JT727_24855 PF03946 Ribosomal protein L11, N-terminal domain JT727_24855 PF00298 Ribosomal protein L11, RNA binding domain JT727_24860 PF00467 KOW motif JT727_24860 PF02357 Transcription termination factor nusG JT727_24865 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JT727_24870 PF03143 Elongation factor Tu C-terminal domain JT727_24870 PF00009 Elongation factor Tu GTP binding domain JT727_24870 PF03144 Elongation factor Tu domain 2 JT727_24895 PF00485 Phosphoribulokinase / Uridine kinase family JT727_24900 PF02237 Biotin protein ligase C terminal domain JT727_24900 PF03099 Biotin/lipoate A/B protein ligase family JT727_24900 PF08279 HTH domain JT727_24905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JT727_24905 PF01565 FAD binding domain JT727_24935 PF12724 Flavodoxin domain JT727_24940 PF02386 Cation transport protein JT727_24945 PF09186 Domain of unknown function (DUF1949) JT727_24945 PF01205 Uncharacterized protein family UPF0029 JT727_24950 PF00557 Metallopeptidase family M24 JT727_24955 PF00378 Enoyl-CoA hydratase/isomerase JT727_24955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT727_24955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT727_24960 PF00108 Thiolase, N-terminal domain JT727_24960 PF02803 Thiolase, C-terminal domain JT727_24965 PF00970 Oxidoreductase FAD-binding domain JT727_24965 PF00175 Oxidoreductase NAD-binding domain JT727_24970 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JT727_24975 PF02357 Transcription termination factor nusG JT727_24980 PF01026 TatD related DNase JT727_24985 PF00902 Sec-independent protein translocase protein (TatC) JT727_24995 PF02416 mttA/Hcf106 family JT727_25000 PF03109 ABC1 family JT727_25005 PF02036 SCP-2 sterol transfer family JT727_25010 PF01209 ubiE/COQ5 methyltransferase family JT727_25015 PF02646 RmuC family JT727_25020 PF01048 Phosphorylase superfamily JT727_25025 PF01738 Dienelactone hydrolase family JT727_25030 PF08267 Cobalamin-independent synthase, N-terminal domain JT727_25030 PF01717 Cobalamin-independent synthase, Catalytic domain JT727_25035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_25035 PF03466 LysR substrate binding domain JT727_25040 PF00892 EamA-like transporter family JT727_25050 PF12146 Serine aminopeptidase, S33 JT727_25055 PF01810 LysE type translocator JT727_25060 PF04754 Putative transposase, YhgA-like JT727_25065 PF01810 LysE type translocator JT727_25070 PF16124 RecQ zinc-binding JT727_25070 PF00271 Helicase conserved C-terminal domain JT727_25070 PF09382 RQC domain JT727_25070 PF00570 HRDC domain JT727_25070 PF00270 DEAD/DEAH box helicase JT727_25075 PF02253 Phospholipase A1 JT727_25080 PF03061 Thioesterase superfamily JT727_25085 PF00892 EamA-like transporter family JT727_25090 PF01544 CorA-like Mg2+ transporter protein JT727_25095 PF13361 UvrD-like helicase C-terminal domain JT727_25095 PF00580 UvrD/REP helicase N-terminal domain JT727_25100 PF13419 Haloacid dehalogenase-like hydrolase JT727_25105 PF00589 Phage integrase family JT727_25105 PF02899 Phage integrase, N-terminal SAM-like domain JT727_25110 PF04340 Protein of unknown function, DUF484 JT727_25115 PF01678 Diaminopimelate epimerase JT727_25120 PF13627 Prokaryotic lipoprotein-attachment site JT727_25125 PF01491 Frataxin-like domain JT727_25130 PF01295 Adenylate cyclase, class-I JT727_25130 PF12633 Adenylate cyclase NT domain JT727_25135 PF03900 Porphobilinogen deaminase, C-terminal domain JT727_25135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JT727_25140 PF02602 Uroporphyrinogen-III synthase HemD JT727_25145 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JT727_25150 PF07219 HemY protein N-terminus JT727_25150 PF07719 Tetratricopeptide repeat JT727_25175 PF00324 Amino acid permease JT727_25180 PF03808 Glycosyl transferase WecB/TagA/CpsF family JT727_25185 PF06899 WzyE protein, O-antigen assembly polymerase JT727_25190 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 JT727_25195 PF01943 Polysaccharide biosynthesis protein JT727_25200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JT727_25210 PF00483 Nucleotidyl transferase JT727_25215 PF16363 GDP-mannose 4,6 dehydratase JT727_25220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JT727_25220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JT727_25220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JT727_25225 PF02350 UDP-N-acetylglucosamine 2-epimerase JT727_25230 PF02706 Chain length determinant protein JT727_25235 PF00953 Glycosyl transferase family 4 JT727_25240 PF07498 Rho termination factor, N-terminal domain JT727_25240 PF07497 Rho termination factor, RNA-binding domain JT727_25240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JT727_25245 PF00085 Thioredoxin JT727_25250 PF00270 DEAD/DEAH box helicase JT727_25250 PF00271 Helicase conserved C-terminal domain JT727_25255 PF02541 Ppx/GppA phosphatase family JT727_25260 PF03466 LysR substrate binding domain JT727_25260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_25270 PF04474 Protein of unknown function (DUF554) JT727_25275 PF13361 UvrD-like helicase C-terminal domain JT727_25275 PF00580 UvrD/REP helicase N-terminal domain JT727_25290 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JT727_25290 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JT727_25295 PF03466 LysR substrate binding domain JT727_25295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_25300 PF00291 Pyridoxal-phosphate dependent enzyme JT727_25300 PF00585 C-terminal regulatory domain of Threonine dehydratase JT727_25305 PF00920 Dehydratase family JT727_25310 PF01063 Amino-transferase class IV JT727_25320 PF00205 Thiamine pyrophosphate enzyme, central domain JT727_25320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT727_25320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT727_25330 PF08046 IlvGEDA operon leader peptide JT727_25335 PF13335 Magnesium chelatase, subunit ChlI C-terminal JT727_25335 PF01078 Magnesium chelatase, subunit ChlI JT727_25340 PF04219 Protein of unknown function, DUF JT727_25345 PF03466 LysR substrate binding domain JT727_25345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_25385 PF01177 Asp/Glu/Hydantoin racemase JT727_25390 PF07715 TonB-dependent Receptor Plug Domain JT727_25390 PF00593 TonB dependent receptor JT727_25395 PF05958 tRNA (Uracil-5-)-methyltransferase JT727_25400 PF07226 Protein of unknown function (DUF1422) JT727_25405 PF00440 Bacterial regulatory proteins, tetR family JT727_25410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JT727_25410 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT727_25415 PF03466 LysR substrate binding domain JT727_25415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_25420 PF14698 Argininosuccinate lyase C-terminal JT727_25420 PF00206 Lyase JT727_25425 PF00696 Amino acid kinase family JT727_25430 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT727_25430 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT727_25435 PF01546 Peptidase family M20/M25/M40 JT727_25435 PF07687 Peptidase dimerisation domain JT727_25440 PF00311 Phosphoenolpyruvate carboxylase JT727_25445 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JT727_25450 PF12833 Helix-turn-helix domain JT727_25455 PF00923 Transaldolase/Fructose-6-phosphate aldolase JT727_25460 PF00465 Iron-containing alcohol dehydrogenase JT727_25465 PF00892 EamA-like transporter family JT727_25470 PF02219 Methylenetetrahydrofolate reductase JT727_25475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_25475 PF03466 LysR substrate binding domain JT727_25480 PF02627 Carboxymuconolactone decarboxylase family JT727_25485 PF00149 Calcineurin-like phosphoesterase JT727_25485 PF02872 5'-nucleotidase, C-terminal domain JT727_25495 PF00742 Homoserine dehydrogenase JT727_25495 PF03447 Homoserine dehydrogenase, NAD binding domain JT727_25495 PF00696 Amino acid kinase family JT727_25500 PF01053 Cys/Met metabolism PLP-dependent enzyme JT727_25505 PF01340 Met Apo-repressor, MetJ JT727_25510 PF01197 Ribosomal protein L31 JT727_25515 PF00270 DEAD/DEAH box helicase JT727_25515 PF18074 Primosomal protein N C-terminal domain JT727_25515 PF17764 3′ DNA-binding domain (3′BD) JT727_25515 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JT727_25515 PF00271 Helicase conserved C-terminal domain JT727_25520 PF00356 Bacterial regulatory proteins, lacI family JT727_25525 PF05036 Sporulation related domain JT727_25530 PF00227 Proteasome subunit JT727_25535 PF07724 AAA domain (Cdc48 subfamily) JT727_25535 PF10431 C-terminal, D2-small domain, of ClpB protein JT727_25535 PF00004 ATPase family associated with various cellular activities (AAA) JT727_25540 PF01040 UbiA prenyltransferase family JT727_25545 PF03737 Aldolase/RraA JT727_25550 PF00365 Phosphofructokinase JT727_25555 PF01545 Cation efflux family JT727_25555 PF16916 Dimerisation domain of Zinc Transporter JT727_25560 PF07813 LTXXQ motif family protein JT727_25565 PF00486 Transcriptional regulatory protein, C terminal JT727_25565 PF00072 Response regulator receiver domain JT727_25570 PF00672 HAMP domain JT727_25570 PF00512 His Kinase A (phospho-acceptor) domain JT727_25570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_25570 PF16527 Two-component sensor protein CpxA, periplasmic domain JT727_25575 PF03475 3-alpha domain JT727_25575 PF03473 MOSC domain JT727_25580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JT727_25580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JT727_25585 PF06379 L-rhamnose-proton symport protein (RhaT) JT727_25590 PF02311 AraC-like ligand binding domain JT727_25590 PF12833 Helix-turn-helix domain JT727_25595 PF12833 Helix-turn-helix domain JT727_25595 PF02311 AraC-like ligand binding domain JT727_25600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT727_25600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT727_25605 PF06134 L-rhamnose isomerase (RhaA) JT727_25610 PF00596 Class II Aldolase and Adducin N-terminal domain JT727_25615 PF13407 Periplasmic binding protein domain JT727_25620 PF00005 ABC transporter JT727_25625 PF02653 Branched-chain amino acid transport system / permease component JT727_25630 PF02653 Branched-chain amino acid transport system / permease component JT727_25635 PF00465 Iron-containing alcohol dehydrogenase JT727_25640 PF05336 L-rhamnose mutarotase JT727_25645 PF01306 LacY proton/sugar symporter JT727_25650 PF16874 Glycosyl hydrolase family 36 C-terminal domain JT727_25650 PF16875 Glycosyl hydrolase family 36 N-terminal domain JT727_25655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT727_25655 PF00356 Bacterial regulatory proteins, lacI family JT727_25680 PF02634 FdhD/NarQ family JT727_25690 PF13247 4Fe-4S dicluster domain JT727_25690 PF09163 Formate dehydrogenase N, transmembrane JT727_25695 PF01292 Prokaryotic cytochrome b561 JT727_25700 PF04216 Protein involved in formate dehydrogenase formation JT727_25715 PF07859 alpha/beta hydrolase fold JT727_25720 PF00583 Acetyltransferase (GNAT) family JT727_25720 PF09500 Putative thioesterase (yiiD_Cterm) JT727_25725 PF02580 D-Tyr-tRNA(Tyr) deacylase JT727_25730 PF03631 Virulence factor BrkB JT727_25735 PF13419 Haloacid dehalogenase-like hydrolase JT727_25740 PF03144 Elongation factor Tu domain 2 JT727_25740 PF00009 Elongation factor Tu GTP binding domain JT727_25740 PF00679 Elongation factor G C-terminus JT727_25745 PF00120 Glutamine synthetase, catalytic domain JT727_25745 PF03951 Glutamine synthetase, beta-Grasp domain JT727_25750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT727_25750 PF00512 His Kinase A (phospho-acceptor) domain JT727_25750 PF00989 PAS fold JT727_25755 PF00072 Response regulator receiver domain JT727_25755 PF00158 Sigma-54 interaction domain JT727_25755 PF02954 Bacterial regulatory protein, Fis family JT727_25765 PF06969 HemN C-terminal domain JT727_25765 PF04055 Radical SAM superfamily JT727_25770 PF04220 Der GTPase activator (YihI) JT727_25775 PF01926 50S ribosome-binding GTPase JT727_25780 PF01367 5'-3' exonuclease, C-terminal SAM fold JT727_25780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JT727_25780 PF00476 DNA polymerase family A JT727_25780 PF01612 3'-5' exonuclease JT727_25785 PF01553 Acyltransferase JT727_25790 PF01323 DSBA-like thioredoxin domain JT727_25795 PF01636 Phosphotransferase enzyme family JT727_25800 PF06288 Protein of unknown function (DUF1040) JT727_25805 PF12804 MobA-like NTP transferase domain JT727_25810 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JT727_25835 PF00392 Bacterial regulatory proteins, gntR family JT727_25835 PF07729 FCD domain JT727_25840 PF07690 Major Facilitator Superfamily JT727_25845 PF00356 Bacterial regulatory proteins, lacI family JT727_25850 PF00294 pfkB family carbohydrate kinase JT727_25855 PF13407 Periplasmic binding protein domain JT727_25860 PF02653 Branched-chain amino acid transport system / permease component JT727_25865 PF00005 ABC transporter JT727_25870 PF05025 RbsD / FucU transport protein family JT727_25875 PF02705 K+ potassium transporter JT727_25880 PF12592 Protein of unknown function (DUF3763) JT727_25880 PF17868 AAA lid domain JT727_25880 PF07728 AAA domain (dynein-related subfamily) JT727_25885 PF05762 VWA domain containing CoxE-like protein JT727_25890 PF03590 Aspartate-ammonia ligase JT727_25895 PF01037 Lrp/AsnC ligand binding domain JT727_25900 PF00258 Flavodoxin JT727_25905 PF01134 Glucose inhibited division protein A JT727_25905 PF13932 GidA associated domain JT727_25910 PF02527 rRNA small subunit methyltransferase G JT727_25915 PF03899 ATP synthase I chain JT727_25920 PF00119 ATP synthase A chain JT727_25925 PF00137 ATP synthase subunit C JT727_25930 PF00430 ATP synthase B/B' CF(0) JT727_25935 PF00213 ATP synthase delta (OSCP) subunit JT727_25940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JT727_25940 PF00306 ATP synthase alpha/beta chain, C terminal domain JT727_25940 PF02874 ATP synthase alpha/beta family, beta-barrel domain JT727_25945 PF00231 ATP synthase JT727_25950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JT727_25950 PF02874 ATP synthase alpha/beta family, beta-barrel domain JT727_25955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JT727_25955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JT727_25960 PF12804 MobA-like NTP transferase domain JT727_25960 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_25965 PF01380 SIS domain JT727_25970 PF12849 PBP superfamily domain JT727_25975 PF00528 Binding-protein-dependent transport system inner membrane component JT727_25980 PF00528 Binding-protein-dependent transport system inner membrane component JT727_25985 PF00005 ABC transporter JT727_25990 PF01895 PhoU domain JT727_25995 PF11471 Maltoporin periplasmic N-terminal extension JT727_25995 PF02264 LamB porin JT727_26000 PF00756 Putative esterase JT727_26000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT727_26005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JT727_26010 PF13419 Haloacid dehalogenase-like hydrolase JT727_26015 PF00860 Permease family JT727_26020 PF03358 NADPH-dependent FMN reductase JT727_26030 PF03466 LysR substrate binding domain JT727_26030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT727_26035 PF07690 Major Facilitator Superfamily JT727_26045 PF10396 GTP-binding protein TrmE N-terminus JT727_26045 PF01926 50S ribosome-binding GTPase JT727_26045 PF12631 MnmE helical domain JT727_26050 PF02096 60Kd inner membrane protein JT727_26050 PF14849 YidC periplasmic domain JT727_26055 PF01809 Putative membrane protein insertion efficiency factor JT727_26060 PF00825 Ribonuclease P JT727_26065 PF00468 Ribosomal protein L34 JT727_26070 PF01051 Initiator Replication protein JT727_26075 PF13614 AAA domain JT727_26075 PF18607 ParA helix turn helix domain JT727_26080 PF08775 ParB family JT727_26080 PF02195 ParB-like nuclease domain JT727_26095 PF02384 N-6 DNA Methylase JT727_26125 PF00589 Phage integrase family JT727_26170 PF13817 IS66 C-terminal element JT727_26170 PF13005 zinc-finger binding domain of transposase IS66 JT727_26170 PF03050 Transposase IS66 family JT727_26170 PF13007 Transposase C of IS166 homeodomain JT727_26175 PF05717 IS66 Orf2 like protein JT727_26185 PF01695 IstB-like ATP binding protein JT727_26190 PF02796 Helix-turn-helix domain of resolvase JT727_26190 PF00665 Integrase core domain JT727_26225 PF13098 Thioredoxin-like domain JT727_26225 PF10411 Disulfide bond isomerase protein N-terminus JT727_26250 PF02586 SOS response associated peptidase (SRAP) JT727_26260 PF13610 DDE domain JT727_26265 PF00302 Chloramphenicol acetyltransferase JT727_26300 PF13610 DDE domain JT727_26315 PF00239 Resolvase, N terminal domain JT727_26315 PF02796 Helix-turn-helix domain of resolvase JT727_26330 PF13599 Pentapeptide repeats (9 copies) JT727_26345 PF02796 Helix-turn-helix domain of resolvase JT727_26345 PF00239 Resolvase, N terminal domain JT727_26355 PF00817 impB/mucB/samB family JT727_26355 PF11799 impB/mucB/samB family C-terminal domain JT727_26355 PF13438 Domain of unknown function (DUF4113) JT727_26360 PF12729 Four helix bundle sensory module for signal transduction JT727_26360 PF00672 HAMP domain JT727_26360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JT727_26365 PF13610 DDE domain JT727_26385 PF13700 Domain of unknown function (DUF4158) JT727_26385 PF01526 Tn3 transposase DDE domain JT727_26400 PF13610 DDE domain JT727_26420 PF00132 Bacterial transferase hexapeptide (six repeats) JT727_26435 PF07091 Ribosomal RNA methyltransferase (FmrO) JT727_26450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JT727_26460 PF00589 Phage integrase family JT727_26460 PF13495 Phage integrase, N-terminal SAM-like domain JT727_26465 PF01526 Tn3 transposase DDE domain JT727_26465 PF13700 Domain of unknown function (DUF4158) JT727_26470 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ JT727_26475 PF02796 Helix-turn-helix domain of resolvase JT727_26475 PF00239 Resolvase, N terminal domain JT727_26485 PF13610 DDE domain JT727_26510 PF02387 IncFII RepA protein family JT727_26520 PF10723 Replication regulatory protein RepB JT727_26550 PF04352 ProQ/FINO family JT727_26550 PF12602 Fertility inhibition protein N terminal JT727_26555 PF05857 TraX protein JT727_26560 PF08751 TrwC relaxase JT727_26560 PF18272 single-stranded DNA binding TraI N-terminal subdomain JT727_26560 PF07057 DNA helicase TraI JT727_26560 PF18340 DNA relaxase TraI 2B/2B-like domain JT727_26580 PF01695 IstB-like ATP binding protein JT727_26585 PF00665 Integrase core domain JT727_26595 PF07178 TraL protein JT727_26600 PF05513 TraA JT727_26605 PF05509 TraY domain JT727_26615 PF05261 TraM protein, DNA-binding JT727_26620 PF01464 Transglycosylase SLT domain JT727_26630 PF06067 Domain of unknown function (DUF932) JT727_26675 PF01848 Hok/gef family JT727_26695 PF06290 Plasmid SOS inhibition protein (PsiB) JT727_26700 PF02195 ParB-like nuclease domain JT727_26705 PF06006 Bacterial protein of unknown function (DUF905) JT727_26710 PF00436 Single-strand binding protein family JT727_26715 PF00398 Ribosomal RNA adenine dimethylase JT727_26740 PF06440 DNA polymerase III, theta subunit JT727_26755 PF03230 Antirestriction protein JT727_26765 PF07128 Protein of unknown function (DUF1380) JT727_26775 PF01555 DNA methylase JT727_26790 PF06406 StbA protein JT727_26795 PF00717 Peptidase S24-like JT727_26800 PF11799 impB/mucB/samB family C-terminal domain JT727_26800 PF00817 impB/mucB/samB family JT727_26800 PF13438 Domain of unknown function (DUF4113) JT727_26810 PF01757 Acyltransferase family JT727_26845 PF01815 Rop protein JT727_26855 PF00665 Integrase core domain JT727_26860 PF01695 IstB-like ATP binding protein JT727_26875 PF05713 Bacterial mobilisation protein (MobC) JT727_26885 PF04837 MbeB-like, N-term conserved region JT727_26900 PF00905 Penicillin binding protein transpeptidase domain JT727_26915 PF01815 Rop protein