locus-tag	class	description
JT727_00020	COG0187	DNA topoisomerase II activity
JT727_00025	COG0561	phosphatase activity
JT727_00040	COG2186	Transcriptional regulator
JT727_00045	COG3734	2-keto-3-deoxy-galactonokinase
JT727_00050	COG0800	Aldolase
JT727_00060	COG2271	Major facilitator Superfamily
JT727_00065	COG0823	Involved in the tonB-independent uptake of proteins
JT727_00070	COG5645	(Lipo)protein
JT727_00085	COG3645	SOS response
JT727_00095	COG2188	Transcriptional regulator
JT727_00110	COG2149	membrane
JT727_00130	COG2610	gluconate transmembrane transporter activity
JT727_00140	COG0583	DNA-binding transcription factor activity
JT727_00145	COG2814	Major facilitator Superfamily
JT727_00175	COG0028	Belongs to the TPP enzyme family
JT727_00180	COG0440	acetolactate synthase activity
JT727_00185	COG2197	response regulator
JT727_00195	COG2271	Major facilitator Superfamily
JT727_00235	COG2188	Transcriptional regulator
JT727_00260	COG4580	involved in the transport of maltose and maltodextrins
JT727_00265	COG1447	Phosphotransferase system cellobiose-specific component IIA
JT727_00270	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_00270	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_00280	COG1609	Transcriptional regulator
JT727_00290	COG3384	dioxygenase
JT727_00295	COG0583	DNA-binding transcription factor activity
JT727_00300	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JT727_00305	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JT727_00310	COG2828	Protein conserved in bacteria
JT727_00325	COG0697	spore germination
JT727_00330	COG1263	PTS System
JT727_00330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JT727_00340	COG2814	Major facilitator Superfamily
JT727_00385	COG0583	DNA-binding transcription factor activity
JT727_00410	COG1464	Belongs to the NlpA lipoprotein family
JT727_00425	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JT727_00435	COG1064	alcohol dehydrogenase
JT727_00490	COG4584	PFAM Integrase catalytic
JT727_00495	COG1484	DNA-dependent DNA replication
JT727_00525	COG0582	viral genome integration into host DNA
JT727_00535	COG2211	Major facilitator Superfamily
JT727_00540	COG1501	Belongs to the glycosyl hydrolase 31 family
JT727_00550	COG1486	melibiose metabolic process
JT727_00555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JT727_00555	COG1263	PTS System
JT727_00560	COG2982	Protein involved in outer membrane biogenesis
JT727_00565	COG2233	PERMEase
JT727_00570	COG0786	glutamate:sodium symporter activity
JT727_00590	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JT727_00615	COG3152	Membrane
JT727_00625	COG1494	fructose-1,6-bisphosphatase
JT727_00630	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JT727_00635	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JT727_00640	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JT727_00660	COG2860	membrane
JT727_00670	COG2169	Transcriptional regulator
JT727_00670	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JT727_00675	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JT727_00680	COG1561	YicC-like family, N-terminal region
JT727_00700	COG1131	(ABC) transporter
JT727_00705	COG0842	Transport permease protein
JT727_00730	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JT727_00765	COG1519	Transferase
JT727_00770	COG1216	Glycosyl transferase, family 2
JT727_00775	COG0438	transferase activity, transferring glycosyl groups
JT727_00785	COG0859	PFAM glycosyl transferase family 9
JT727_00810	COG0859	PFAM glycosyl transferase family 9
JT727_00825	COG0156	8-amino-7-oxononanoate synthase activity
JT727_00835	COG0463	Glycosyl transferase, family 2
JT727_00840	COG2861	carbohydrate metabolic process
JT727_00845	COG4942	peptidase
JT727_00855	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JT727_00860	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JT727_00880	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JT727_00890	COG2186	Transcriptional regulator
JT727_00910	COG3722	fumarate hydratase activity
JT727_00925	COG0625	glutathione transferase activity
JT727_00935	COG3276	selenocysteine insertion sequence binding
JT727_00940	COG1414	Transcriptional regulator
JT727_00945	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JT727_00950	COG3977	Valine--pyruvate aminotransferase
JT727_00955	COG0366	Alpha amylase catalytic
JT727_00960	COG2992	FlgJ-related protein
JT727_00965	COG1609	Transcriptional regulator
JT727_00965	COG2207	Transcriptional regulator
JT727_00970	COG4214	carbohydrate transport
JT727_00980	COG4213	ABC transporter substrate-binding protein
JT727_00995	COG4682	membrane
JT727_01000	COG4682	membrane
JT727_01005	COG3274	enterobacterial common antigen metabolic process
JT727_01035	COG1278	Cold shock
JT727_01040	COG2944	sequence-specific DNA binding
JT727_01045	COG2814	Major facilitator Superfamily
JT727_01065	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JT727_01075	COG1609	Transcriptional regulator
JT727_01080	COG2885	chlorophyll binding
JT727_01085	COG0243	molybdopterin cofactor binding
JT727_01090	COG0456	acetyltransferase
JT727_01095	COG2818	Glycosylase
JT727_01100	COG5571	outer membrane autotransporter
JT727_01105	COG2223	nitrite transmembrane transporter activity
JT727_01135	COG0747	negative chemotaxis
JT727_01140	COG0601	transmembrane transport
JT727_01145	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JT727_01150	COG0444	Belongs to the ABC transporter superfamily
JT727_01155	COG4608	Belongs to the ABC transporter superfamily
JT727_01170	COG2894	cell division
JT727_01180	COG1215	transferase activity, transferring glycosyl groups
JT727_01185	COG0457	Tetratricopeptide repeat
JT727_01200	COG2194	sulfuric ester hydrolase activity
JT727_01230	COG1215	transferase activity, transferring glycosyl groups
JT727_01235	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JT727_01240	COG3118	belongs to the thioredoxin family
JT727_01240	COG0457	Tetratricopeptide repeat
JT727_01245	COG2200	EAL domain
JT727_01245	COG2199	diguanylate cyclase activity
JT727_01255	COG0612	Peptidase, M16
JT727_01265	COG2982	Protein involved in outer membrane biogenesis
JT727_01270	COG0477	Major facilitator Superfamily
JT727_01275	COG1295	ribonuclease BN
JT727_01280	COG0583	DNA-binding transcription factor activity
JT727_01285	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_01290	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JT727_01300	COG1454	alcohol dehydrogenase
JT727_01310	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JT727_01315	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JT727_01320	COG0671	phosphoesterase, PA-phosphatase related
JT727_01340	COG0589	response to stress
JT727_01350	COG0306	phosphate transporter
JT727_01355	COG2081	HI0933 family
JT727_01360	COG2239	Acts as a magnesium transporter
JT727_01375	COG1124	(ABC) transporter
JT727_01385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JT727_01390	COG0601	transmembrane transport
JT727_01395	COG0747	negative chemotaxis
JT727_01405	COG3479	Phenolic acid decarboxylase
JT727_01445	COG0628	permease
JT727_01450	COG0477	Major facilitator Superfamily
JT727_01460	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JT727_01475	COG3714	YhhN family
JT727_01485	COG3776	membrane
JT727_01490	COG0742	ribosomal rna small subunit methyltransferase
JT727_01495	COG0552	protein localization to endoplasmic reticulum
JT727_01500	COG2884	Cell division ATP-binding protein ftsE
JT727_01505	COG2177	Part of the ABC transporter FtsEX involved in
JT727_01520	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JT727_01530	COG0683	leucine binding
JT727_01540	COG0683	leucine binding
JT727_01545	COG0559	Belongs to the binding-protein-dependent transport system permease family
JT727_01595	COG0584	glycerophosphoryl diester phosphodiesterase
JT727_01605	COG0405	Gamma-glutamyltransferase
JT727_01610	COG1247	-acetyltransferase
JT727_01620	COG0673	inositol 2-dehydrogenase activity
JT727_01625	COG1741	Belongs to the pirin family
JT727_01630	COG1609	Transcriptional regulator
JT727_01635	COG3265	gluconokinase activity
JT727_01640	COG2610	gluconate transmembrane transporter activity
JT727_01650	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JT727_01675	COG0058	SHG alpha-glucan phosphorylase activity
JT727_01680	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JT727_01695	COG1349	DNA-binding transcription factor activity
JT727_01705	COG0058	SHG alpha-glucan phosphorylase activity
JT727_01710	COG1640	4-alpha-glucanotransferase
JT727_01715	COG2610	gluconate transmembrane transporter activity
JT727_01725	COG1040	competence protein
JT727_01750	COG1918	ferrous iron import across plasma membrane
JT727_01755	COG2183	response to ionizing radiation
JT727_01760	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JT727_01785	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JT727_01790	COG1011	Hydrolase
JT727_01800	COG0494	nUDIX hydrolase
JT727_01805	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JT727_01830	COG4796	Type ii and iii secretion system protein
JT727_01845	COG3266	domain, Protein
JT727_01850	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JT727_01855	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JT727_01880	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JT727_01885	COG0402	S-adenosylhomocysteine deaminase activity
JT727_01890	COG0738	Major facilitator superfamily
JT727_01915	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JT727_01920	COG1289	transmembrane transporter activity
JT727_01930	COG1765	OsmC-like protein
JT727_01935	COG3954	Phosphoribulokinase
JT727_01945	COG0429	hydrolase of the alpha beta-hydrolase fold
JT727_01950	COG0488	(ABC) transporter
JT727_01965	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
JT727_01970	COG1047	Peptidyl-prolyl cis-trans
JT727_01980	COG0545	Peptidyl-prolyl cis-trans isomerase
JT727_01985	COG2964	Protein conserved in bacteria
JT727_02040	COG0051	transcription antitermination factor activity, RNA binding
JT727_02065	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JT727_02080	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JT727_02145	COG0201	protein transport
JT727_02170	COG0202	RNA polymerase activity
JT727_02185	COG0789	Transcriptional regulator
JT727_02190	COG3036	rescue of stalled ribosome
JT727_02220	COG0758	DNA mediated transformation
JT727_02230	COG0551	DNA topoisomerase type I activity
JT727_02250	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JT727_02285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JT727_02290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_02295	COG1309	transcriptional regulator
JT727_02315	COG4145	pantothenate transmembrane transporter activity
JT727_02320	COG3924	membrane
JT727_02325	COG0439	Biotin carboxylase
JT727_02330	COG0511	ligase activity, forming carbon-carbon bonds
JT727_02355	COG2200	EAL domain
JT727_02355	COG2199	diguanylate cyclase activity
JT727_02360	COG1077	Cell shape determining protein MreB Mrl
JT727_02365	COG1792	Involved in formation and maintenance of cell shape
JT727_02370	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JT727_02380	COG1530	ribonuclease E activity
JT727_02385	COG3164	Protein of unknown function
JT727_02390	COG0312	modulator of DNA gyrase
JT727_02395	COG0583	DNA-binding transcription factor activity
JT727_02410	COG1289	transmembrane transporter activity
JT727_02415	COG2732	(Barnase) inhibitor
JT727_02440	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JT727_02445	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JT727_02450	COG3105	Protein conserved in bacteria
JT727_02455	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JT727_02475	COG0625	glutathione transferase activity
JT727_02480	COG2969	positive regulation of protein catabolic process
JT727_02490	COG0493	'glutamate synthase
JT727_02495	COG0069	glutamate synthase activity
JT727_02495	COG0067	glutamate synthase
JT727_02495	COG0070	glutamate synthase
JT727_02500	COG1242	4 iron, 4 sulfur cluster binding
JT727_02505	COG2271	Major facilitator Superfamily
JT727_02510	COG1063	alcohol dehydrogenase
JT727_02515	COG1312	Catalyzes the dehydration of D-mannonate
JT727_02520	COG0784	Response regulator, receiver
JT727_02520	COG5002	protein histidine kinase activity
JT727_02520	COG2198	Histidine kinase
JT727_02525	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
JT727_02530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JT727_02535	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_02545	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_02550	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JT727_02555	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JT727_02560	COG1137	ATPase activity
JT727_02565	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JT727_02570	COG3117	lipopolysaccharide transmembrane transporter activity
JT727_02575	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JT727_02585	COG0530	calcium, potassium:sodium antiporter activity
JT727_02590	COG1127	ABC transporter
JT727_02595	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JT727_02600	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JT727_02605	COG2854	intermembrane phospholipid transfer
JT727_02610	COG3113	response to antibiotic
JT727_02615	COG5007	Belongs to the BolA IbaG family
JT727_02625	COG3423	Transcriptional regulator
JT727_02630	COG0142	geranyltranstransferase activity
JT727_02645	COG0697	spore germination
JT727_02655	COG2027	D-alanyl-D-alanine carboxypeptidase
JT727_02665	COG1534	Rna-binding protein
JT727_02675	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JT727_02680	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JT727_02690	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JT727_02730	COG0195	Participates in both transcription termination and antitermination
JT727_02775	COG0814	amino acid
JT727_02780	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JT727_02785	COG0826	peptidase U32
JT727_02790	COG0826	peptidase U32
JT727_02795	COG3154	lipid carrier protein
JT727_02800	COG3153	acetyltransferase
JT727_02815	COG0693	protein deglycase activity
JT727_02820	COG0702	epimerase
JT727_02825	COG0701	Predicted permease
JT727_02830	COG2823	Periplasmic or secreted lipoprotein
JT727_02850	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JT727_02855	COG2721	sulfolactate sulfo-lyase activity
JT727_02860	COG2271	Major facilitator Superfamily
JT727_02870	COG2084	Dehydrogenase
JT727_02875	COG1929	Belongs to the glycerate kinase type-1 family
JT727_02900	COG1741	Belongs to the pirin family
JT727_02905	COG0583	DNA-binding transcription factor activity
JT727_02910	COG3152	Membrane
JT727_02915	COG0435	Glutathione S-transferase
JT727_02920	COG2259	Doxx family
JT727_02930	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
JT727_02935	COG4575	ribosome binding
JT727_02940	COG1422	Protein of unknown function (DUF1090)
JT727_02950	COG0586	Pfam SNARE associated Golgi protein
JT727_02955	COG2186	Transcriptional regulator
JT727_02960	COG2271	Major facilitator Superfamily
JT727_02970	COG2721	sulfolactate sulfo-lyase activity
JT727_02985	COG0861	Integral membrane protein TerC family
JT727_02990	COG0673	inositol 2-dehydrogenase activity
JT727_02995	COG1451	nucleotide metabolic process
JT727_03015	COG1902	pentaerythritol trinitrate reductase activity
JT727_03015	COG0446	pyridine nucleotide-disulphide oxidoreductase
JT727_03065	COG1695	Transcriptional regulator
JT727_03070	COG2375	cellular response to nickel ion
JT727_03085	COG1461	Dihydroxyacetone kinase
JT727_03090	COG2376	Dihydroxyacetone kinase
JT727_03160	COG3247	response to pH
JT727_03170	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_03170	COG0784	Response regulator, receiver
JT727_03170	COG2205	protein histidine kinase activity
JT727_03170	COG2198	Histidine kinase
JT727_03175	COG2197	response regulator
JT727_03220	COG3539	Fimbrial protein
JT727_03225	COG3121	Chaperone
JT727_03230	COG3188	usher protein
JT727_03235	COG3539	Fimbrial protein
JT727_03240	COG3539	Fimbrial protein
JT727_03245	COG3539	Fimbrial protein
JT727_03250	COG2200	EAL domain
JT727_03265	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JT727_03270	COG0358	DNA primase activity
JT727_03275	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JT727_03340	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JT727_03355	COG4991	sh3 domain protein
JT727_03360	COG3025	triphosphatase activity
JT727_03385	COG2960	long-chain fatty acid transporting porin activity
JT727_03400	COG3384	dioxygenase
JT727_03405	COG0754	glutathionylspermidine amidase activity
JT727_03420	COG0494	nUDIX hydrolase
JT727_03425	COG3151	Protein conserved in bacteria
JT727_03430	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JT727_03435	COG3150	esterase
JT727_03445	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JT727_03450	COG2249	NAD(P)H dehydrogenase (quinone) activity
JT727_03455	COG0642	Histidine kinase
JT727_03465	COG3111	PFAM Bacterial OB fold (BOF) protein
JT727_03470	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JT727_03475	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JT727_03480	COG0204	Acyl-transferase
JT727_03485	COG2132	Multicopper oxidase
JT727_03490	COG1032	radical SAM domain protein
JT727_03500	COG0656	L-ascorbic acid biosynthetic process
JT727_03505	COG1979	alcohol dehydrogenase
JT727_03510	COG2207	Transcriptional regulator
JT727_03515	COG0586	Pfam SNARE associated Golgi protein
JT727_03520	COG0626	cystathionine gamma-synthase activity
JT727_03530	COG0848	biopolymer transport protein
JT727_03535	COG2211	Major facilitator Superfamily
JT727_03560	COG0625	glutathione transferase activity
JT727_03575	COG0754	glutathionylspermidine amidase activity
JT727_03580	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JT727_03600	COG0583	DNA-binding transcription factor activity
JT727_03605	COG0626	cystathionine gamma-synthase activity
JT727_03620	COG1811	Na channel or pump
JT727_03625	COG1982	Orn Lys Arg decarboxylase major
JT727_03630	COG2211	Major facilitator Superfamily
JT727_03645	COG1194	a g-specific adenine glycosylase
JT727_03655	COG3171	Protein conserved in bacteria
JT727_03665	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JT727_03680	COG0762	integral membrane protein
JT727_03685	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JT727_03690	COG2805	Type II/IV secretion system protein
JT727_03710	COG0189	ligase activity
JT727_03715	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JT727_03720	COG2356	endonuclease I
JT727_03730	COG2814	Major facilitator Superfamily
JT727_03765	COG0501	Belongs to the peptidase M48B family
JT727_03770	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JT727_03785	COG0191	fructose-bisphosphate aldolase activity
JT727_03790	COG0668	transmembrane transport
JT727_03800	COG2968	Membrane
JT727_03815	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JT727_03820	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JT727_03840	COG0006	proline dipeptidase activity
JT727_03845	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JT727_03850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JT727_03870	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_03875	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JT727_03895	COG2723	6-phospho-beta-galactosidase activity
JT727_03900	COG1737	Transcriptional regulator
JT727_03910	COG1272	protein, Hemolysin III
JT727_03920	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JT727_03930	COG0716	FMN binding
JT727_03935	COG4974	Belongs to the 'phage' integrase family
JT727_03945	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JT727_03965	COG4942	peptidase
JT727_03975	COG2814	Major facilitator Superfamily
JT727_03990	COG0667	Aldo Keto reductase
JT727_04030	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JT727_04035	COG1393	Belongs to the ArsC family
JT727_04050	COG1538	Outer membrane efflux protein
JT727_04055	COG1289	transmembrane transporter activity
JT727_04070	COG3592	Divergent 4Fe-4S mono-cluster
JT727_04075	COG2388	GCN5-related N-acetyl-transferase
JT727_04085	COG3539	Fimbrial protein
JT727_04090	COG3539	Fimbrial protein
JT727_04095	COG3539	Fimbrial protein
JT727_04100	COG3188	usher protein
JT727_04105	COG3121	Chaperone
JT727_04110	COG3539	Fimbrial protein
JT727_04120	COG4974	Belongs to the 'phage' integrase family
JT727_04125	COG0582	viral genome integration into host DNA
JT727_04130	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JT727_04135	COG1846	Transcriptional regulator
JT727_04140	COG0697	spore germination
JT727_04190	COG0667	Aldo Keto reductase
JT727_04195	COG0814	amino acid
JT727_04210	COG0183	Belongs to the thiolase family
JT727_04220	COG0823	Involved in the tonB-independent uptake of proteins
JT727_04225	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_04230	COG2814	Major facilitator Superfamily
JT727_04265	COG3842	ATPase activity
JT727_04270	COG0395	ABC-type sugar transport system, permease component
JT727_04275	COG1175	transmembrane transport
JT727_04280	COG1917	Cupin 2, conserved barrel domain protein
JT727_04285	COG1794	racemase activity, acting on amino acids and derivatives
JT727_04290	COG0583	DNA-binding transcription factor activity
JT727_04300	COG1609	Transcriptional regulator
JT727_04305	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_04310	COG2723	6-phospho-beta-galactosidase activity
JT727_04315	COG2186	Transcriptional regulator
JT727_04325	COG1609	Transcriptional regulator
JT727_04345	COG0667	Aldo Keto reductase
JT727_04355	COG0861	Integral membrane protein TerC family
JT727_04390	COG2165	general secretion pathway protein
JT727_04395	COG4795	General secretion pathway protein
JT727_04405	COG4967	type IV pilus modification protein PilV
JT727_04410	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JT727_04415	COG1025	Belongs to the peptidase M16 family
JT727_04420	COG1074	ATP-dependent DNA helicase activity
JT727_04425	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JT727_04435	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JT727_04435	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JT727_04440	COG0860	N-Acetylmuramoyl-L-alanine amidase
JT727_04445	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JT727_04475	COG4656	Part of a membrane complex involved in electron transport
JT727_04480	COG1012	belongs to the aldehyde dehydrogenase family
JT727_04480	COG1454	alcohol dehydrogenase
JT727_04510	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
JT727_04675	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JT727_04680	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JT727_04685	COG2166	iron-sulfur cluster assembly
JT727_04690	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JT727_04700	COG0583	DNA-binding transcription factor activity
JT727_04705	COG2363	Small membrane protein
JT727_04715	COG1349	DNA-binding transcription factor activity
JT727_04735	COG0738	Major facilitator superfamily
JT727_04740	COG0235	Class ii aldolase
JT727_04745	COG1454	alcohol dehydrogenase
JT727_04765	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JT727_04780	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JT727_04785	COG2011	ABC-type metal ion transport system permease component
JT727_04790	COG1464	Belongs to the NlpA lipoprotein family
JT727_04795	COG0477	Major facilitator Superfamily
JT727_04805	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JT727_04810	COG1760	l-serine dehydratase
JT727_04815	COG0814	amino acid
JT727_04820	COG1611	Belongs to the LOG family
JT727_04835	COG3098	single-species biofilm formation
JT727_04840	COG0564	pseudouridine synthase activity
JT727_04845	COG0716	FMN binding
JT727_04850	COG2271	Major facilitator Superfamily
JT727_04855	COG4948	Mandelate Racemase Muconate Lactonizing
JT727_04860	COG4948	Mandelate Racemase Muconate Lactonizing
JT727_04865	COG1929	Belongs to the glycerate kinase type-1 family
JT727_04870	COG2205	protein histidine kinase activity
JT727_04870	COG3850	Histidine kinase
JT727_04870	COG4999	Histidine kinase
JT727_04870	COG3437	response regulator, receiver
JT727_04880	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JT727_04885	COG3956	TIGRFAM MazG family protein
JT727_04905	COG0602	queuosine metabolic process
JT727_04910	COG0720	synthase
JT727_04930	COG2234	aminopeptidase activity
JT727_04990	COG4942	peptidase
JT727_04990	COG1388	LysM domain
JT727_04995	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JT727_05020	COG0163	prenyltransferase activity
JT727_05025	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JT727_05065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_05070	COG4558	Periplasmic binding protein
JT727_05075	COG3720	iron ion transport
JT727_05095	COG0679	Auxin Efflux Carrier
JT727_05110	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JT727_05115	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JT727_05120	COG1121	(ABC) transporter
JT727_05125	COG0803	Belongs to the bacterial solute-binding protein 9 family
JT727_05130	COG1609	Transcriptional regulator
JT727_05135	COG1940	carbohydrate kinase activity
JT727_05140	COG1447	Phosphotransferase system cellobiose-specific component IIA
JT727_05145	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_05150	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_05155	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_05160	COG4580	involved in the transport of maltose and maltodextrins
JT727_05170	COG2723	6-phospho-beta-galactosidase activity
JT727_05180	COG0309	Hydrogenase expression formation protein (HypE)
JT727_05185	COG0409	Hydrogenase expression formation protein
JT727_05190	COG0298	carbon dioxide binding
JT727_05195	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JT727_05210	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JT727_05215	COG0651	ATP synthesis coupled electron transport
JT727_05220	COG0650	Formate hydrogenlyase subunit 4
JT727_05225	COG3261	NADH dehydrogenase
JT727_05225	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
JT727_05230	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JT727_05235	COG3260	NADH ubiquinone oxidoreductase 20
JT727_05245	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JT727_05255	COG2723	6-phospho-beta-galactosidase activity
JT727_05260	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JT727_05260	COG1263	PTS System
JT727_05265	COG1609	Transcriptional regulator
JT727_05270	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JT727_05275	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
JT727_05280	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
JT727_05305	COG1349	DNA-binding transcription factor activity
JT727_05310	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_05315	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_05325	COG3732	PTS system glucitol sorbitol-specific
JT727_05330	COG3730	PTS system glucitol sorbitol-specific
JT727_05335	COG2951	lytic endotransglycosylase activity
JT727_05340	COG1121	(ABC) transporter
JT727_05345	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JT727_05355	COG1546	Belongs to the CinA family
JT727_05375	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JT727_05405	COG2823	Periplasmic or secreted lipoprotein
JT727_05410	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JT727_05415	COG1238	metal cluster binding
JT727_05435	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JT727_05440	COG2814	Major facilitator Superfamily
JT727_05445	COG1566	PFAM secretion protein HlyD family protein
JT727_05450	COG1846	Transcriptional regulator
JT727_05460	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JT727_05470	COG4176	ABC-type proline glycine betaine transport system permease component
JT727_05485	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JT727_05495	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JT727_05500	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JT727_05505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JT727_05510	COG4575	ribosome binding
JT727_05525	COG2916	Histone family protein nucleoid-structuring protein H-NS
JT727_05540	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JT727_05545	COG0640	Transcriptional regulator
JT727_05555	COG0583	DNA-binding transcription factor activity
JT727_05560	COG3284	Transcriptional regulator
JT727_05570	COG3539	Fimbrial protein
JT727_05575	COG3121	Chaperone
JT727_05595	COG3188	usher protein
JT727_05600	COG3121	Chaperone
JT727_05605	COG3539	Fimbrial protein
JT727_05610	COG2197	response regulator
JT727_05625	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_05635	COG0235	Class ii aldolase
JT727_05645	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_05700	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_05705	COG3708	Transcriptional regulator
JT727_05705	COG2207	Transcriptional regulator
JT727_05735	COG2867	negative regulation of translational initiation
JT727_05750	COG0497	DNA recombination
JT727_05765	COG4536	flavin adenine dinucleotide binding
JT727_05770	COG4137	Cytochrome C assembly protein
JT727_05775	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JT727_05810	COG2885	chlorophyll binding
JT727_05815	COG2199	diguanylate cyclase activity
JT727_05825	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JT727_05830	COG0287	Prephenate dehydrogenase
JT727_05830	COG1605	Chorismate mutase
JT727_05840	COG1605	Chorismate mutase
JT727_05840	COG0077	Prephenate dehydratase
JT727_05850	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JT727_05855	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JT727_05870	COG0542	response to heat
JT727_05895	COG0477	Major facilitator Superfamily
JT727_05900	COG5544	Lipoprotein
JT727_05905	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JT727_05915	COG3148	PFAM DTW domain containing protein
JT727_05920	COG3118	belongs to the thioredoxin family
JT727_05925	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JT727_05940	COG0513	Belongs to the DEAD box helicase family
JT727_05950	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JT727_05965	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
JT727_05970	COG3026	antisigma factor binding
JT727_05975	COG3086	response to oxidative stress
JT727_05985	COG0681	Belongs to the peptidase S26 family
JT727_06005	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JT727_06015	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JT727_06020	COG1737	Transcriptional regulator
JT727_06025	COG0560	Phosphoserine phosphatase
JT727_06040	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JT727_06040	COG0047	phosphoribosylformylglycinamidine synthase activity
JT727_06045	COG2205	protein histidine kinase activity
JT727_06050	COG3170	Tfp pilus assembly protein FimV
JT727_06055	COG2204	response regulator
JT727_06060	COG0347	Belongs to the P(II) protein family
JT727_06065	COG1017	nitric oxide dioxygenase activity
JT727_06065	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JT727_06075	COG2259	Doxx family
JT727_06085	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
JT727_06090	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JT727_06110	COG1940	carbohydrate kinase activity
JT727_06115	COG0457	Tetratricopeptide repeat
JT727_06120	COG0477	Major facilitator Superfamily
JT727_06120	COG2814	Major facilitator Superfamily
JT727_06125	COG2017	converts alpha-aldose to the beta-anomer
JT727_06130	COG2814	Major facilitator Superfamily
JT727_06135	COG3711	transcriptional antiterminator
JT727_06140	COG3683	transport system, periplasmic component
JT727_06145	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JT727_06175	COG0822	iron-sulfur transferase activity
JT727_06195	COG0633	Ferredoxin
JT727_06200	COG2975	iron-sulfur cluster assembly
JT727_06220	COG2897	thiosulfate sulfurtransferase activity
JT727_06225	COG2373	Large extracellular alpha-helical protein
JT727_06230	COG4953	penicillin-binding protein 1C
JT727_06260	COG2976	Protein conserved in bacteria
JT727_06290	COG1645	bacterial-type flagellum-dependent swarming motility
JT727_06300	COG0516	GMP reductase activity
JT727_06300	COG0517	IMP dehydrogenase activity
JT727_06310	COG3119	arylsulfatase activity
JT727_06315	COG0641	radical SAM
JT727_06350	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JT727_06365	COG2723	6-phospho-beta-galactosidase activity
JT727_06375	COG2233	PERMEase
JT727_06390	COG1393	Belongs to the ArsC family
JT727_06395	COG4783	chaperone-mediated protein folding
JT727_06405	COG0628	permease
JT727_06410	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JT727_06415	COG2716	regulation of RNA biosynthetic process
JT727_06425	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
JT727_06435	COG2321	neutral zinc metallopeptidase
JT727_06440	COG1444	tRNA N-acetyltransferase activity
JT727_06445	COG0400	carboxylic ester hydrolase activity
JT727_06460	COG1393	Belongs to the ArsC family
JT727_06470	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JT727_06475	COG0493	'glutamate synthase
JT727_06475	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JT727_06485	COG5342	invasion associated locus B
JT727_06490	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JT727_06495	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JT727_06505	COG4810	utilization protein
JT727_06595	COG0860	N-Acetylmuramoyl-L-alanine amidase
JT727_06615	COG2837	iron assimilation
JT727_06625	COG4150	thiosulfate binding
JT727_06630	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
JT727_06635	COG4208	sulfate ABC transporter
JT727_06640	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JT727_06650	COG4319	ketosteroid isomerase
JT727_06685	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JT727_06705	COG3530	Putative quorum-sensing-regulated virulence factor
JT727_06710	COG0385	Bile acid
JT727_06715	COG0583	DNA-binding transcription factor activity
JT727_06755	COG3415	Transposase
JT727_06760	COG3415	Transposase
JT727_06775	COG2200	EAL domain
JT727_06775	COG2199	diguanylate cyclase activity
JT727_06780	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JT727_06795	COG0667	Aldo Keto reductase
JT727_06800	COG3961	Belongs to the TPP enzyme family
JT727_06815	COG3279	Response regulator of the LytR AlgR family
JT727_06820	COG3275	phosphorelay sensor kinase activity
JT727_06835	COG0436	Aminotransferase
JT727_06845	COG2807	transmembrane transport
JT727_06850	COG0590	tRNA wobble adenosine to inosine editing
JT727_06855	COG0583	DNA-binding transcription factor activity
JT727_06875	COG2116	formate transmembrane transporter activity
JT727_06880	COG2853	Lipoprotein
JT727_06890	COG3691	Protein conserved in bacteria
JT727_06905	COG2062	phosphohistidine phosphatase, SixA
JT727_06930	COG0730	response to heat
JT727_06935	COG3101	peptidyl-lysine hydroxylation
JT727_06950	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JT727_06970	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JT727_06980	COG0586	Pfam SNARE associated Golgi protein
JT727_06990	COG0285	dihydrofolate synthase activity
JT727_06995	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
JT727_07000	COG1286	toxin biosynthetic process
JT727_07005	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JT727_07010	COG0163	prenyltransferase activity
JT727_07035	COG4160	amino acid transport
JT727_07040	COG4598	ABC transporter
JT727_07055	COG1090	epimerase
JT727_07060	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JT727_07065	COG0625	glutathione transferase activity
JT727_07070	COG0625	glutathione transferase activity
JT727_07075	COG0622	Phosphoesterase
JT727_07080	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JT727_07085	COG0857	belongs to the CobB CobQ family
JT727_07085	COG0280	phosphate acetyltransferase
JT727_07105	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JT727_07110	COG0471	metal ion transport
JT727_07110	COG0490	domain, Protein
JT727_07120	COG0436	Aminotransferase
JT727_07125	COG0583	DNA-binding transcription factor activity
JT727_07170	COG0839	Belongs to the complex I subunit 6 family
JT727_07180	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JT727_07185	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JT727_07200	COG2153	protein acetylation
JT727_07205	COG1169	isochorismate synthase
JT727_07230	COG0318	PFAM AMP-dependent synthetase and ligase
JT727_07240	COG5464	transposase or invertase
JT727_07255	COG1414	Transcriptional regulator
JT727_07265	COG2271	Major facilitator Superfamily
JT727_07275	COG0247	lactate metabolic process
JT727_07285	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JT727_07290	COG2271	Major facilitator Superfamily
JT727_07300	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JT727_07325	COG2205	protein histidine kinase activity
JT727_07325	COG0784	Response regulator, receiver
JT727_07335	COG2198	Histidine kinase
JT727_07335	COG0642	Histidine kinase
JT727_07350	COG2169	Transcriptional regulator
JT727_07350	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JT727_07355	COG3145	DNA-N1-methyladenine dioxygenase activity
JT727_07360	COG4615	Cyclic peptide transporter
JT727_07365	COG2239	Acts as a magnesium transporter
JT727_07370	COG0659	secondary active sulfate transmembrane transporter activity
JT727_07385	COG0628	permease
JT727_07410	COG1349	DNA-binding transcription factor activity
JT727_07415	COG0494	nUDIX hydrolase
JT727_07435	COG1061	Type III restriction enzyme res subunit
JT727_07440	COG1187	pseudouridine synthase activity
JT727_07445	COG2814	Major facilitator Superfamily
JT727_07455	COG4172	Belongs to the ABC transporter superfamily
JT727_07460	COG4239	(ABC) transporter, permease
JT727_07465	COG4174	ABC transporter (Permease)
JT727_07470	COG4166	transmembrane transport
JT727_07475	COG2200	EAL domain
JT727_07480	COG0791	NLP P60 protein
JT727_07485	COG0671	phosphoesterase, PA-phosphatase related
JT727_07490	COG0523	cobalamin synthesis protein
JT727_07495	COG0246	Mannitol dehydrogenase
JT727_07500	COG1312	Catalyzes the dehydration of D-mannonate
JT727_07525	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_07525	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_07530	COG1105	Belongs to the carbohydrate kinase PfkB family
JT727_07535	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_07535	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_07535	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JT727_07545	COG2855	membrane
JT727_07550	COG0583	DNA-binding transcription factor activity
JT727_07555	COG0833	amino acid
JT727_07560	COG4771	TonB-dependent receptor
JT727_07575	COG2311	Membrane
JT727_07590	COG1129	ABC transporter
JT727_07600	COG2949	membrane
JT727_07610	COG1346	cytolysis
JT727_07620	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JT727_07640	COG2723	6-phospho-beta-galactosidase activity
JT727_07645	COG1538	Outer membrane efflux protein
JT727_07650	COG0586	Pfam SNARE associated Golgi protein
JT727_07660	COG1686	Belongs to the peptidase S11 family
JT727_07670	COG0277	FAD linked oxidase domain protein
JT727_07675	COG1472	Belongs to the glycosyl hydrolase 3 family
JT727_07680	COG1732	Glycine betaine
JT727_07685	COG1174	glycine betaine transport
JT727_07690	COG1125	glycine betaine transport
JT727_07695	COG1174	glycine betaine transport
JT727_07705	COG3275	phosphorelay sensor kinase activity
JT727_07715	COG4807	Protein conserved in bacteria
JT727_07735	COG5455	response to cobalt ion
JT727_07740	COG0583	DNA-binding transcription factor activity
JT727_07745	COG2252	PERMEase
JT727_07755	COG0583	DNA-binding transcription factor activity
JT727_07840	COG0351	phosphomethylpyrimidine kinase
JT727_07845	COG1830	Aldolase
JT727_07880	COG1070	Carbohydrate kinase
JT727_07890	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JT727_07895	COG4948	Mandelate Racemase Muconate Lactonizing
JT727_07900	COG0747	negative chemotaxis
JT727_07905	COG0601	transmembrane transport
JT727_07910	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JT727_07915	COG0444	Belongs to the ABC transporter superfamily
JT727_07920	COG4608	Belongs to the ABC transporter superfamily
JT727_07930	COG0826	peptidase U32
JT727_07935	COG0745	RESPONSE REGULATOR receiver
JT727_07940	COG2205	protein histidine kinase activity
JT727_07965	COG1301	dicarboxylic acid transport
JT727_07985	COG5002	protein histidine kinase activity
JT727_07990	COG0443	Heat shock 70 kDa protein
JT727_07995	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JT727_08010	COG2982	Protein involved in outer membrane biogenesis
JT727_08015	COG1253	flavin adenine dinucleotide binding
JT727_08055	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JT727_08145	COG0438	transferase activity, transferring glycosyl groups
JT727_08150	COG1216	Glycosyl transferase, family 2
JT727_08150	COG1442	glycosyl transferase family 8
JT727_08160	COG0463	Glycosyl transferase, family 2
JT727_08185	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JT727_08215	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JT727_08220	COG0583	DNA-binding transcription factor activity
JT727_08230	COG0531	amino acid
JT727_08235	COG0640	Transcriptional regulator
JT727_08240	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JT727_08245	COG2925	Exonuclease
JT727_08260	COG1289	transmembrane transporter activity
JT727_08280	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JT727_08290	COG1942	4-Oxalocrotonate Tautomerase
JT727_08295	COG0583	DNA-binding transcription factor activity
JT727_08300	COG0095	Lipoate-protein ligase
JT727_08305	COG0477	Major facilitator Superfamily
JT727_08315	COG3300	MHYT domain
JT727_08315	COG5001	Diguanylate cyclase
JT727_08325	COG3615	Tellurite resistance protein tehB
JT727_08350	COG3706	GGDEF domain
JT727_08365	COG0534	Mate efflux family protein
JT727_08375	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JT727_08395	COG0604	alcohol dehydrogenase
JT727_08400	COG1309	transcriptional regulator
JT727_08405	COG0025	NhaP-type Na H and K H
JT727_08425	COG3621	Patatin-like phospholipase
JT727_08515	COG3504	Conjugal transfer protein
JT727_08590	COG4771	TonB-dependent receptor
JT727_08595	COG1021	2,3-dihydroxybenzoate-AMP ligase
JT727_08615	COG2226	methyltransferase
JT727_08615	COG3433	isochorismatase activity
JT727_08615	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JT727_08630	COG1132	(ABC) transporter
JT727_08635	COG2814	Major facilitator Superfamily
JT727_08640	COG1169	isochorismate synthase
JT727_08645	COG0582	viral genome integration into host DNA
JT727_08660	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_08665	COG0735	belongs to the Fur family
JT727_08670	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JT727_08675	COG0523	cobalamin synthesis protein
JT727_08700	COG0523	cobalamin synthesis protein
JT727_08730	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JT727_08735	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JT727_08740	COG1121	(ABC) transporter
JT727_08745	COG0803	Belongs to the bacterial solute-binding protein 9 family
JT727_08750	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JT727_08760	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JT727_08795	COG0803	Belongs to the bacterial solute-binding protein 9 family
JT727_08800	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JT727_08805	COG1121	(ABC) transporter
JT727_08815	COG0582	viral genome integration into host DNA
JT727_08865	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JT727_08875	COG1418	mRNA catabolic process
JT727_08880	COG0270	DNA (cytosine-5-)-methyltransferase activity
JT727_08885	COG3727	T/G mismatch-specific endonuclease activity
JT727_08890	COG0697	spore germination
JT727_08895	COG2354	Protein conserved in bacteria
JT727_08925	COG0366	Alpha amylase catalytic
JT727_08930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_08940	COG0765	amino acid transport
JT727_08945	COG1126	abc transporter atp-binding protein
JT727_08950	COG2197	response regulator
JT727_08995	COG3318	Belongs to the UPF0149 family
JT727_08995	COG3012	SEC-C Motif Domain Protein
JT727_09000	COG0814	amino acid
JT727_09010	COG1528	Iron-storage protein
JT727_09025	COG0477	Major facilitator Superfamily
JT727_09035	COG2211	Major facilitator Superfamily
JT727_09045	COG1528	Iron-storage protein
JT727_09055	COG1879	ABC-type sugar transport system periplasmic component
JT727_09065	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_09090	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JT727_09100	COG3102	Protein conserved in bacteria
JT727_09120	COG3788	relative of glutathione S-transferase, MAPEG superfamily
JT727_09125	COG1801	Protein of unknown function DUF72
JT727_09130	COG1335	isochorismatase
JT727_09140	COG0494	nUDIX hydrolase
JT727_09165	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JT727_09175	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JT727_09180	COG0739	heme binding
JT727_09185	COG1560	Kdo2-lipid A biosynthetic process
JT727_09195	COG1737	Transcriptional regulator
JT727_09205	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JT727_09210	COG0129	dihydroxy-acid dehydratase activity
JT727_09215	COG0800	Aldolase
JT727_09225	COG3141	response to X-ray
JT727_09230	COG2979	Protein of unknown function (DUF533)
JT727_09235	COG1770	oligopeptidase
JT727_09240	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JT727_09250	COG2372	response to copper ion
JT727_09255	COG1276	copper resistance
JT727_09270	COG2990	Protein conserved in bacteria
JT727_09295	COG3008	intermembrane lipid transfer
JT727_09300	COG2995	paraquat-inducible protein a
JT727_09305	COG1956	GAF domain-containing protein
JT727_09325	COG2814	Major facilitator Superfamily
JT727_09330	COG1414	Transcriptional regulator
JT727_09360	COG0768	penicillin binding
JT727_09365	COG2226	methyltransferase
JT727_09380	COG3716	PTS system mannose fructose sorbose family IID component
JT727_09385	COG3715	PTS system
JT727_09390	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_09390	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JT727_09395	COG1253	flavin adenine dinucleotide binding
JT727_09400	COG2200	EAL domain
JT727_09405	COG1760	l-serine dehydratase
JT727_09425	COG0251	oxidation-reduction process
JT727_09430	COG1199	ATP-dependent helicase activity
JT727_09435	COG1214	PFAM Peptidase M22, glycoprotease
JT727_09440	COG3065	identical protein binding
JT727_09450	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JT727_09460	COG2894	cell division
JT727_09475	COG0179	Fumarylacetoacetate (FAA) hydrolase
JT727_09505	COG2719	SpoVR family
JT727_09530	COG1619	proteins homologs of microcin C7 resistance protein MccF
JT727_09540	COG4774	siderophore transport
JT727_09555	COG2308	Evidence 4 Homologs of previously reported genes of
JT727_09600	COG0583	DNA-binding transcription factor activity
JT727_09605	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JT727_09620	COG1882	Formate acetyltransferase
JT727_09655	COG0583	DNA-binding transcription factor activity
JT727_09685	COG0583	DNA-binding transcription factor activity
JT727_09700	COG3122	Protein conserved in bacteria
JT727_09720	COG2885	chlorophyll binding
JT727_09765	COG1262	PFAM Formylglycine-generating sulfatase enzyme
JT727_09860	COG0012	GTP binding
JT727_09880	COG0659	secondary active sulfate transmembrane transporter activity
JT727_09910	COG2890	protein-(glutamine-N5) methyltransferase activity
JT727_09930	COG0387	Pfam Sodium calcium exchanger
JT727_09935	COG4572	Cation transport regulator
JT727_09940	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JT727_09950	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JT727_09955	COG3707	response regulator
JT727_09960	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JT727_09970	COG1116	anion transmembrane transporter activity
JT727_09975	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JT727_09975	COG2146	nitrite reductase [NAD(P)H] activity
JT727_09980	COG0243	molybdopterin cofactor binding
JT727_09985	COG4932	domain protein
JT727_09990	COG2197	response regulator
JT727_09995	COG3850	Histidine kinase
JT727_10000	COG2223	nitrite transmembrane transporter activity
JT727_10010	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JT727_10015	COG1140	nitrate reductase beta subunit
JT727_10020	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JT727_10025	COG2181	nitrate reductase activity
JT727_10035	COG1522	sequence-specific DNA binding
JT727_10070	COG0788	formyltetrahydrofolate deformylase activity
JT727_10080	COG1752	Esterase of the alpha-beta hydrolase superfamily
JT727_10085	COG0745	RESPONSE REGULATOR receiver
JT727_10090	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JT727_10095	COG2916	Histone family protein nucleoid-structuring protein H-NS
JT727_10105	COG1435	thymidine kinase activity
JT727_10110	COG1454	alcohol dehydrogenase
JT727_10110	COG1012	belongs to the aldehyde dehydrogenase family
JT727_10120	COG2095	MarC family integral membrane protein
JT727_10125	COG4166	transmembrane transport
JT727_10130	COG0601	transmembrane transport
JT727_10135	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JT727_10140	COG0444	Belongs to the ABC transporter superfamily
JT727_10150	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JT727_10170	COG2353	YceI-like domain
JT727_10180	COG2350	Protein conserved in bacteria
JT727_10190	COG3001	Fructosamine kinase
JT727_10200	COG1105	Belongs to the carbohydrate kinase PfkB family
JT727_10205	COG3137	Salt-induced outer membrane protein
JT727_10245	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JT727_10245	COG0072	phenylalanine-tRNA ligase activity
JT727_10265	COG0583	DNA-binding transcription factor activity
JT727_10285	COG0386	Belongs to the glutathione peroxidase family
JT727_10295	COG0791	NLP P60 protein
JT727_10305	COG4256	Hemin uptake protein
JT727_10310	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JT727_10325	COG0574	Belongs to the PEP-utilizing enzyme family
JT727_10325	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JT727_10335	COG0628	permease
JT727_10340	COG0247	lactate metabolic process
JT727_10340	COG0277	FAD linked oxidase domain protein
JT727_10345	COG2050	protein possibly involved in aromatic compounds catabolism
JT727_10350	COG2261	transglycosylase associated protein
JT727_10375	COG1120	ATPase activity
JT727_10380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_10390	COG0583	DNA-binding transcription factor activity
JT727_10415	COG1304	FMN binding
JT727_10420	COG1309	transcriptional regulator
JT727_10440	COG0316	Belongs to the HesB IscA family
JT727_10445	COG0719	Fe-S assembly protein
JT727_10450	COG0396	ATPase activity
JT727_10455	COG0719	Fe-S assembly protein
JT727_10470	COG1376	ErfK ybiS ycfS ynhG family protein
JT727_10500	COG1309	transcriptional regulator
JT727_10505	COG1082	Xylose isomerase domain protein TIM barrel
JT727_10505	COG3185	4-Hydroxyphenylpyruvate dioxygenase
JT727_10510	COG2271	Major facilitator Superfamily
JT727_10515	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JT727_10525	COG1120	ATPase activity
JT727_10530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_10535	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JT727_10540	COG1414	Transcriptional regulator
JT727_10575	COG2814	Major facilitator Superfamily
JT727_10595	COG0583	DNA-binding transcription factor activity
JT727_10600	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JT727_10620	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JT727_10625	COG1116	anion transmembrane transporter activity
JT727_10630	COG4774	siderophore transport
JT727_10635	COG1120	ATPase activity
JT727_10640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_10645	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_10665	COG0765	amino acid transport
JT727_10670	COG1126	abc transporter atp-binding protein
JT727_10710	COG3383	formate dehydrogenase (NAD+) activity
JT727_10715	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
JT727_10725	COG1175	transmembrane transport
JT727_10755	COG4133	protoheme IX ABC transporter activity
JT727_10760	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JT727_10765	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JT727_10780	COG1138	Cytochrome C-type biogenesis protein
JT727_10785	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JT727_10790	COG4235	cytochrome complex assembly
JT727_10790	COG3088	subunit of a heme lyase
JT727_10800	COG2207	Transcriptional regulator
JT727_10805	COG0656	L-ascorbic acid biosynthetic process
JT727_10845	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_10850	COG2610	gluconate transmembrane transporter activity
JT727_10855	COG1250	3-hydroxyacyl-CoA dehydrogenase
JT727_10865	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JT727_10875	COG0583	DNA-binding transcription factor activity
JT727_10900	COG0277	FAD linked oxidase domain protein
JT727_10905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JT727_10930	COG0402	S-adenosylhomocysteine deaminase activity
JT727_10990	COG2200	EAL domain
JT727_11005	COG2205	protein histidine kinase activity
JT727_11010	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_11040	COG2814	Major facilitator Superfamily
JT727_11045	COG1082	Xylose isomerase domain protein TIM barrel
JT727_11055	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JT727_11085	COG4608	Belongs to the ABC transporter superfamily
JT727_11090	COG0444	Belongs to the ABC transporter superfamily
JT727_11115	COG0346	lactoylglutathione lyase activity
JT727_11120	COG1349	DNA-binding transcription factor activity
JT727_11155	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JT727_11210	COG0307	riboflavin synthase, alpha
JT727_11215	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JT727_11220	COG2814	Major facilitator Superfamily
JT727_11225	COG0583	DNA-binding transcription factor activity
JT727_11240	COG2814	Major facilitator Superfamily
JT727_11255	COG0791	NLP P60 protein
JT727_11260	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JT727_11270	COG0346	lactoylglutathione lyase activity
JT727_11275	COG1902	pentaerythritol trinitrate reductase activity
JT727_11280	COG1309	transcriptional regulator
JT727_11285	COG3313	Fe-S protein
JT727_11290	COG4989	oxidoreductase activity
JT727_11295	COG2032	superoxide dismutase activity
JT727_11300	COG1289	transmembrane transporter activity
JT727_11305	COG1566	PFAM secretion protein HlyD family protein
JT727_11320	COG3706	GGDEF domain
JT727_11335	COG3895	Periplasmic Protein
JT727_11350	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
JT727_11355	COG0625	glutathione transferase activity
JT727_11365	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JT727_11375	COG4659	FMN binding
JT727_11410	COG2723	6-phospho-beta-galactosidase activity
JT727_11420	COG0673	inositol 2-dehydrogenase activity
JT727_11430	COG2814	Major facilitator Superfamily
JT727_11450	COG3038	cytochrome b561
JT727_11470	COG0583	DNA-binding transcription factor activity
JT727_11475	COG3485	protocatechuate 3,4-dioxygenase
JT727_11480	COG3485	protocatechuate 3,4-dioxygenase
JT727_11485	COG5383	Protein conserved in bacteria
JT727_11490	COG2272	Belongs to the type-B carboxylesterase lipase family
JT727_11505	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JT727_11510	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JT727_11515	COG1275	C4-dicarboxylate transporter malic acid transport protein
JT727_11520	COG0500	methyltransferase
JT727_11535	COG2207	Transcriptional regulator
JT727_11535	COG3708	Transcriptional regulator
JT727_11540	COG3135	benzoate transporter
JT727_11545	COG1396	sequence-specific DNA binding
JT727_11555	COG0826	peptidase U32
JT727_11575	COG1294	oxidase, subunit
JT727_11580	COG1271	oxidase subunit
JT727_11585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JT727_11590	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JT727_11595	COG3842	ATPase activity
JT727_11600	COG1176	ABC-type spermidine putrescine transport system, permease component I
JT727_11605	COG1177	transmembrane transport
JT727_11610	COG1012	belongs to the aldehyde dehydrogenase family
JT727_11645	COG1012	belongs to the aldehyde dehydrogenase family
JT727_11650	COG0747	negative chemotaxis
JT727_11660	COG3238	Protein conserved in bacteria
JT727_11665	COG1247	-acetyltransferase
JT727_11675	COG2130	NADP-dependent
JT727_11690	COG3691	Protein conserved in bacteria
JT727_11695	COG1228	amidohydrolase
JT727_11700	COG4772	TonB-dependent receptor
JT727_11725	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JT727_11730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JT727_11735	COG1473	amidohydrolase
JT727_11740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JT727_11745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_11755	COG0765	amino acid transport
JT727_11760	COG1126	abc transporter atp-binding protein
JT727_11770	COG0625	glutathione transferase activity
JT727_11795	COG2211	Major facilitator Superfamily
JT727_11810	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JT727_11815	COG3842	ATPase activity
JT727_11820	COG1840	ABC-type Fe3 transport system, periplasmic component
JT727_11825	COG1178	ABC-type Fe3 transport system permease component
JT727_11830	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JT727_11835	COG2181	nitrate reductase activity
JT727_11840	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JT727_11845	COG1140	nitrate reductase beta subunit
JT727_11850	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JT727_11870	COG1414	Transcriptional regulator
JT727_11875	COG4948	Mandelate Racemase Muconate Lactonizing
JT727_11880	COG4829	muconolactone delta-isomerase
JT727_11885	COG3485	protocatechuate 3,4-dioxygenase
JT727_11895	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
JT727_11920	COG0437	4 iron, 4 sulfur cluster binding
JT727_11925	COG2864	formate dehydrogenase
JT727_11940	COG2326	polyphosphate kinase activity
JT727_11950	COG2814	Major facilitator Superfamily
JT727_11960	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JT727_11970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JT727_11980	COG0747	negative chemotaxis
JT727_11985	COG1064	alcohol dehydrogenase
JT727_12000	COG0488	(ABC) transporter
JT727_12040	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_12045	COG3729	General stress protein
JT727_12055	COG3685	Protein conserved in bacteria
JT727_12065	COG0366	Alpha amylase catalytic
JT727_12075	COG2323	membrane
JT727_12085	COG3111	PFAM Bacterial OB fold (BOF) protein
JT727_12095	COG1764	response to oxidative stress
JT727_12120	COG3781	membrane
JT727_12125	COG0243	molybdopterin cofactor binding
JT727_12130	COG0583	DNA-binding transcription factor activity
JT727_12135	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_12160	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_12165	COG1447	Phosphotransferase system cellobiose-specific component IIA
JT727_12170	COG2814	Major facilitator Superfamily
JT727_12175	COG1285	pathogenesis
JT727_12180	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JT727_12200	COG0519	Catalyzes the synthesis of GMP from XMP
JT727_12200	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JT727_12240	COG0596	Alpha beta hydrolase
JT727_12250	COG2205	protein histidine kinase activity
JT727_12265	COG0076	glutamate decarboxylase activity
JT727_12270	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JT727_12275	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JT727_12280	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JT727_12285	COG1116	anion transmembrane transporter activity
JT727_12290	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JT727_12305	COG0673	inositol 2-dehydrogenase activity
JT727_12315	COG1609	Transcriptional regulator
JT727_12320	COG3706	GGDEF domain
JT727_12340	COG0402	S-adenosylhomocysteine deaminase activity
JT727_12345	COG1953	Uracil, thiamine, allantoin
JT727_12380	COG0596	Alpha beta hydrolase
JT727_12390	COG2207	Transcriptional regulator
JT727_12470	COG0765	amino acid transport
JT727_12480	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JT727_12490	COG2070	2-Nitropropane dioxygenase
JT727_12495	COG0583	DNA-binding transcription factor activity
JT727_12505	COG1902	pentaerythritol trinitrate reductase activity
JT727_12510	COG4529	Protein conserved in bacteria
JT727_12515	COG0477	Major facilitator Superfamily
JT727_12560	COG2223	nitrite transmembrane transporter activity
JT727_12570	COG1609	Transcriptional regulator
JT727_12575	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_12585	COG3037	sugar-specific permease SgaT UlaA
JT727_12590	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JT727_12600	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_12605	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JT727_12605	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_12605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_12615	COG1652	LysM domain
JT727_12640	COG0456	acetyltransferase
JT727_12640	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JT727_12650	COG0667	Aldo Keto reductase
JT727_12655	COG0667	Aldo Keto reductase
JT727_12660	COG3386	PFAM SMP-30 Gluconolaconase
JT727_12665	COG0667	Aldo Keto reductase
JT727_12875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JT727_12880	COG0814	amino acid
JT727_12885	COG0583	DNA-binding transcription factor activity
JT727_12895	COG1294	oxidase, subunit
JT727_12900	COG1271	oxidase subunit
JT727_12910	COG3118	belongs to the thioredoxin family
JT727_12940	COG0583	DNA-binding transcription factor activity
JT727_12980	COG1929	Belongs to the glycerate kinase type-1 family
JT727_12985	COG3835	regulator
JT727_12995	COG0583	DNA-binding transcription factor activity
JT727_13005	COG2186	Transcriptional regulator
JT727_13010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JT727_13010	COG1263	PTS System
JT727_13020	COG2814	Major facilitator Superfamily
JT727_13025	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_13025	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_13040	COG2819	hydrolase of the alpha beta superfamily
JT727_13045	COG5001	Diguanylate cyclase
JT727_13045	COG3300	MHYT domain
JT727_13080	COG3188	usher protein
JT727_13090	COG1649	PFAM Uncharacterised BCR, COG1649
JT727_13095	COG3550	peptidyl-serine autophosphorylation
JT727_13100	COG1396	sequence-specific DNA binding
JT727_13105	COG2351	hydroxyisourate hydrolase activity
JT727_13110	COG3648	Uricase
JT727_13110	COG3195	allantoin biosynthetic process
JT727_13115	COG2233	PERMEase
JT727_13145	COG2207	Transcriptional regulator
JT727_13160	COG4628	conserved protein (DUF2132)
JT727_13180	COG2011	ABC-type metal ion transport system permease component
JT727_13185	COG2070	2-Nitropropane dioxygenase
JT727_13195	COG0477	Major facilitator Superfamily
JT727_13265	COG2199	diguanylate cyclase activity
JT727_13280	COG1012	belongs to the aldehyde dehydrogenase family
JT727_13285	COG0583	DNA-binding transcription factor activity
JT727_13295	COG0039	L-malate dehydrogenase activity
JT727_13300	COG1349	DNA-binding transcription factor activity
JT727_13305	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JT727_13310	COG3395	kinase activity
JT727_13320	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JT727_13335	COG2731	YhcH YjgK YiaL family protein
JT727_13340	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_13370	COG4977	sequence-specific DNA binding
JT727_13380	COG0697	spore germination
JT727_13385	COG2814	Major facilitator Superfamily
JT727_13420	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JT727_13455	COG2223	nitrite transmembrane transporter activity
JT727_13460	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JT727_13475	COG1349	DNA-binding transcription factor activity
JT727_13480	COG2084	Dehydrogenase
JT727_13485	COG3395	kinase activity
JT727_13490	COG0235	Class ii aldolase
JT727_13495	COG3622	Belongs to the hyi family
JT727_13500	COG2610	gluconate transmembrane transporter activity
JT727_13505	COG3708	Transcriptional regulator
JT727_13505	COG2207	Transcriptional regulator
JT727_13520	COG2200	EAL domain
JT727_13525	COG1546	Belongs to the CinA family
JT727_13530	COG0071	Belongs to the small heat shock protein (HSP20) family
JT727_13565	COG2135	peptidase activity
JT727_13570	COG2207	Transcriptional regulator
JT727_13585	COG4221	oxidoreductase activity
JT727_13590	COG1802	Transcriptional regulator
JT727_13595	COG0589	response to stress
JT727_13600	COG0246	Mannitol dehydrogenase
JT727_13605	COG2271	Major facilitator Superfamily
JT727_13620	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JT727_13635	COG0243	molybdopterin cofactor binding
JT727_13640	COG0437	4 iron, 4 sulfur cluster binding
JT727_13645	COG3302	dmso reductase anchor subunit
JT727_13660	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JT727_13665	COG1940	carbohydrate kinase activity
JT727_13670	COG0583	DNA-binding transcription factor activity
JT727_13675	COG2814	Major facilitator Superfamily
JT727_13680	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JT727_13690	COG3591	Belongs to the peptidase S1B family
JT727_13710	COG0628	permease
JT727_13740	COG0679	Auxin Efflux Carrier
JT727_13750	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JT727_13785	COG3290	protein histidine kinase activity
JT727_13790	COG4565	transcriptional regulatory protein
JT727_13810	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JT727_13810	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JT727_13820	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JT727_13825	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JT727_13835	COG0183	Belongs to the thiolase family
JT727_13840	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JT727_13850	COG1414	Transcriptional regulator
JT727_13855	COG2840	Smr protein MutS2
JT727_13860	COG0583	DNA-binding transcription factor activity
JT727_13870	COG1473	amidohydrolase
JT727_13875	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JT727_13890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JT727_13905	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JT727_13910	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JT727_13925	COG0531	amino acid
JT727_13935	COG3136	membrane protein required for alginate biosynthesis
JT727_13940	COG0745	RESPONSE REGULATOR receiver
JT727_13950	COG2205	protein histidine kinase activity
JT727_13960	COG0114	fumarate hydratase activity
JT727_13965	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JT727_13965	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JT727_13970	COG1482	cell wall glycoprotein biosynthetic process
JT727_13975	COG5339	Protein conserved in bacteria
JT727_13980	COG1609	Transcriptional regulator
JT727_13985	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JT727_13985	COG1263	PTS System
JT727_13990	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JT727_14015	COG2391	methyltransferase activity
JT727_14020	COG0425	Belongs to the sulfur carrier protein TusA family
JT727_14025	COG5562	phage envelope protein
JT727_14030	COG0401	homolog of Blt101
JT727_14035	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JT727_14040	COG1012	belongs to the aldehyde dehydrogenase family
JT727_14050	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JT727_14055	COG0477	Major facilitator Superfamily
JT727_14060	COG1113	amino acid transport
JT727_14065	COG2988	succinylglutamate desuccinylase activity
JT727_14070	COG3724	N-succinylarginine dihydrolase activity
JT727_14075	COG1012	belongs to the aldehyde dehydrogenase family
JT727_14080	COG3138	arginine N-succinyltransferase
JT727_14085	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JT727_14095	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JT727_14100	COG0667	Aldo Keto reductase
JT727_14105	COG0583	DNA-binding transcription factor activity
JT727_14130	COG4122	O-methyltransferase activity
JT727_14135	COG1643	Atp-dependent helicase
JT727_14150	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JT727_14155	COG3327	negative regulation of DNA-templated transcription, initiation
JT727_14160	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
JT727_14165	COG0183	Belongs to the thiolase family
JT727_14170	COG2050	protein possibly involved in aromatic compounds catabolism
JT727_14175	COG1250	3-hydroxyacyl-CoA dehydrogenase
JT727_14180	COG1024	Enoyl-CoA hydratase
JT727_14185	COG1024	Enoyl-CoA hydratase
JT727_14190	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JT727_14195	COG2151	metal-sulfur cluster biosynthetic enzyme
JT727_14200	COG3396	Phenylacetate-CoA oxygenase
JT727_14205	COG3460	Phenylacetate-CoA oxygenase
JT727_14210	COG3396	Phenylacetate-CoA oxygenase
JT727_14215	COG2030	dehydratase
JT727_14215	COG1012	belongs to the aldehyde dehydrogenase family
JT727_14235	COG1012	belongs to the aldehyde dehydrogenase family
JT727_14240	COG2207	Transcriptional regulator
JT727_14245	COG3784	Protein of unknown function (DUF1318)
JT727_14255	COG2911	Protein conserved in bacteria
JT727_14260	COG0586	Pfam SNARE associated Golgi protein
JT727_14265	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JT727_14270	COG3187	Heat shock protein
JT727_14275	COG3042	response to heat
JT727_14280	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
JT727_14280	COG0674	pyruvate-flavodoxin oxidoreductase activity
JT727_14280	COG1013	pyruvate-flavodoxin oxidoreductase activity
JT727_14280	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JT727_14285	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JT727_14295	COG0589	response to stress
JT727_14305	COG0513	Belongs to the DEAD box helicase family
JT727_14315	COG1349	DNA-binding transcription factor activity
JT727_14320	COG0673	inositol 2-dehydrogenase activity
JT727_14335	COG1113	amino acid transport
JT727_14340	COG1522	sequence-specific DNA binding
JT727_14350	COG1448	Aminotransferase
JT727_14355	COG2011	ABC-type metal ion transport system permease component
JT727_14370	COG0436	Aminotransferase
JT727_14375	COG0604	alcohol dehydrogenase
JT727_14405	COG0583	DNA-binding transcription factor activity
JT727_14425	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_14430	COG1309	transcriptional regulator
JT727_14435	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_14545	COG2885	chlorophyll binding
JT727_14570	COG0693	protein deglycase activity
JT727_14575	COG1078	dGTPase activity
JT727_14580	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_14585	COG0583	DNA-binding transcription factor activity
JT727_14650	COG3250	beta-galactosidase activity
JT727_14655	COG0656	L-ascorbic acid biosynthetic process
JT727_14685	COG4166	transmembrane transport
JT727_14695	COG2866	Carboxypeptidase
JT727_14700	COG4948	Mandelate Racemase Muconate Lactonizing
JT727_14705	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JT727_14710	COG3180	Ammonia monooxygenase
JT727_14720	COG1486	melibiose metabolic process
JT727_14725	COG0583	DNA-binding transcription factor activity
JT727_14735	COG3106	COG3106 Predicted ATPase
JT727_14745	COG1983	PspC domain protein
JT727_14755	COG1842	Phage shock protein A
JT727_14760	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JT727_14770	COG1473	amidohydrolase
JT727_14785	COG0702	epimerase
JT727_14800	COG4171	peptide transport system, permease
JT727_14815	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JT727_14825	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JT727_14830	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JT727_14830	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JT727_14845	COG1349	DNA-binding transcription factor activity
JT727_14855	COG0023	Translation Initiation Factor
JT727_14865	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JT727_14870	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
JT727_14875	COG0671	phosphoesterase, PA-phosphatase related
JT727_14885	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JT727_14920	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_14925	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
JT727_14950	COG0583	DNA-binding transcription factor activity
JT727_14960	COG0009	L-threonylcarbamoyladenylate synthase
JT727_14970	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JT727_14975	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JT727_14975	COG0512	Glutamine amidotransferase of anthranilate synthase
JT727_14980	COG0134	indole-3-glycerol-phosphate synthase activity
JT727_14980	COG0135	phosphoribosylanthranilate isomerase activity
JT727_15005	COG4774	siderophore transport
JT727_15015	COG3047	cAMP biosynthetic process
JT727_15020	COG0727	PFAM Uncharacterised protein family (UPF0153)
JT727_15050	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JT727_15055	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_15060	COG1988	membrane-bound metal-dependent
JT727_15065	COG1823	symporter activity
JT727_15075	COG0753	catalase activity
JT727_15085	COG1486	melibiose metabolic process
JT727_15090	COG1917	Cupin 2, conserved barrel domain protein
JT727_15090	COG2169	Transcriptional regulator
JT727_15095	COG1447	Phosphotransferase system cellobiose-specific component IIA
JT727_15100	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_15110	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_15115	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JT727_15125	COG0322	excinuclease ABC activity
JT727_15130	COG3678	ATP-independent chaperone mediated protein folding
JT727_15140	COG3724	N-succinylarginine dihydrolase activity
JT727_15150	COG3138	arginine N-succinyltransferase
JT727_15160	COG0708	Exodeoxyribonuclease III
JT727_15165	COG0398	Pfam SNARE associated Golgi protein
JT727_15170	COG0398	Pfam SNARE associated Golgi protein
JT727_15175	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JT727_15180	COG4134	Bacterial extracellular solute-binding protein
JT727_15185	COG4135	transport system, permease component
JT727_15190	COG4136	ATPase activity
JT727_15195	COG2897	thiosulfate sulfurtransferase activity
JT727_15200	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JT727_15205	COG0494	nUDIX hydrolase
JT727_15210	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JT727_15215	COG3321	synthase
JT727_15215	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_15215	COG0604	alcohol dehydrogenase
JT727_15220	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JT727_15225	COG0709	Synthesizes selenophosphate from selenide and ATP
JT727_15235	COG0778	Nitroreductase
JT727_15240	COG0616	signal peptide processing
JT727_15245	COG0252	asparaginase activity
JT727_15250	COG1335	isochorismatase
JT727_15265	COG3139	Protein of unknown function (DUF1315)
JT727_15285	COG0656	L-ascorbic acid biosynthetic process
JT727_15290	COG3713	MltA-interacting MipA family protein
JT727_15295	COG2766	serine protein kinase
JT727_15310	COG0386	Belongs to the glutathione peroxidase family
JT727_15335	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_15340	COG0583	DNA-binding transcription factor activity
JT727_15345	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JT727_15350	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JT727_15360	COG0859	PFAM glycosyl transferase family 9
JT727_15365	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JT727_15375	COG2207	Transcriptional regulator
JT727_15380	COG2807	transmembrane transport
JT727_15385	COG0504	CTP synthase activity
JT727_15390	COG1683	Conserved Protein
JT727_15395	COG3189	MarR family transcriptional regulator
JT727_15400	COG3042	response to heat
JT727_15405	COG2199	diguanylate cyclase activity
JT727_15405	COG2203	Gaf domain
JT727_15425	COG3182	Iron-regulated membrane protein
JT727_15435	COG1560	Kdo2-lipid A biosynthetic process
JT727_15445	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JT727_15450	COG3706	GGDEF domain
JT727_15455	COG0583	DNA-binding transcription factor activity
JT727_15460	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JT727_15490	COG1294	oxidase, subunit
JT727_15495	COG1271	oxidase subunit
JT727_15500	COG3546	catalase activity
JT727_15505	COG3685	Protein conserved in bacteria
JT727_15510	COG3685	Protein conserved in bacteria
JT727_15515	COG3729	General stress protein
JT727_15520	COG1063	alcohol dehydrogenase
JT727_15525	COG3813	Protein conserved in bacteria
JT727_15545	COG0640	Transcriptional regulator
JT727_15550	COG0538	isocitrate dehydrogenase activity
JT727_15620	COG1196	nuclear chromosome segregation
JT727_15665	COG0740	serine-type endopeptidase activity
JT727_15750	COG1403	HNH endonuclease
JT727_15755	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
JT727_15765	COG1846	Transcriptional regulator
JT727_15850	COG0582	viral genome integration into host DNA
JT727_15855	COG0538	isocitrate dehydrogenase activity
JT727_15860	COG1187	pseudouridine synthase activity
JT727_15880	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JT727_15900	COG2205	protein histidine kinase activity
JT727_15905	COG2850	peptidyl-arginine hydroxylation
JT727_15925	COG1177	transmembrane transport
JT727_15940	COG0318	PFAM AMP-dependent synthetase and ligase
JT727_15945	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JT727_15950	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JT727_15955	COG0698	ribose 5-phosphate isomerase
JT727_15970	COG3395	kinase activity
JT727_15985	COG2390	Transcriptional regulator
JT727_15995	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JT727_16005	COG4591	ABC-type transport system involved in lipoprotein release permease component
JT727_16015	COG4591	ABC-type transport system involved in lipoprotein release permease component
JT727_16025	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JT727_16030	COG1376	ErfK ybiS ycfS ynhG family protein
JT727_16030	COG1388	LysM domain
JT727_16045	COG1309	transcriptional regulator
JT727_16060	COG3134	Outer membrane lipoprotein
JT727_16065	COG1252	NADH dehydrogenase
JT727_16090	COG5633	Lipoprotein
JT727_16095	COG0537	adenosine 5'-monophosphoramidase activity
JT727_16105	COG0084	hydrolase, TatD family'
JT727_16110	COG0470	DNA polymerase III
JT727_16120	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JT727_16125	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JT727_16130	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JT727_16145	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JT727_16165	COG1399	metal-binding, possibly nucleic acid-binding protein
JT727_16185	COG1530	ribonuclease E activity
JT727_16195	COG2814	Major facilitator Superfamily
JT727_16215	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JT727_16260	COG1560	Kdo2-lipid A biosynthetic process
JT727_16275	COG5645	(Lipo)protein
JT727_16310	COG3381	protein complex oligomerization
JT727_16335	COG0583	DNA-binding transcription factor activity
JT727_16345	COG1335	isochorismatase
JT727_16360	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JT727_16365	COG1702	phosphate starvation-inducible protein PhoH
JT727_16385	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JT727_16395	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JT727_16410	COG1309	transcriptional regulator
JT727_16445	COG2233	PERMEase
JT727_16455	COG3729	General stress protein
JT727_16485	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_16500	COG0531	amino acid
JT727_16505	COG0174	glutamine synthetase
JT727_16510	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JT727_16515	COG1917	Cupin 2, conserved barrel domain protein
JT727_16515	COG1396	sequence-specific DNA binding
JT727_16520	COG1012	belongs to the aldehyde dehydrogenase family
JT727_16525	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JT727_16530	COG0583	DNA-binding transcription factor activity
JT727_16535	COG0473	3-isopropylmalate dehydrogenase activity
JT727_16540	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JT727_16545	COG4638	Rieske (2fe-2S)
JT727_16550	COG1012	belongs to the aldehyde dehydrogenase family
JT727_16555	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JT727_16560	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JT727_16560	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_16560	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_16565	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_16570	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_16575	COG1882	Formate acetyltransferase
JT727_16580	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JT727_16585	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JT727_16595	COG2207	Transcriptional regulator
JT727_16600	COG3706	GGDEF domain
JT727_16620	COG2200	EAL domain
JT727_16630	COG0058	SHG alpha-glucan phosphorylase activity
JT727_16645	COG0670	Belongs to the BI1 family
JT727_16660	COG2207	Transcriptional regulator
JT727_16665	COG1881	PFAM PEBP family protein
JT727_16680	COG1832	CoA-binding protein
JT727_16690	COG0210	DNA helicase
JT727_16695	COG3304	Inner membrane component domain
JT727_16700	COG1289	transmembrane transporter activity
JT727_16705	COG3070	regulator of competence-specific genes
JT727_16725	COG1067	ATP-dependent peptidase activity
JT727_16735	COG3130	regulation of translation
JT727_16740	COG3009	Protein conserved in bacteria
JT727_16745	COG3008	intermembrane lipid transfer
JT727_16745	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JT727_16750	COG2995	paraquat-inducible protein a
JT727_16755	COG0488	(ABC) transporter
JT727_16765	COG3217	Mosc domain protein beta barrel domain protein
JT727_16765	COG0633	Ferredoxin
JT727_16780	COG0431	NADPH-dependent FMN reductase
JT727_16785	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JT727_16790	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JT727_16795	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JT727_16805	COG0308	aminopeptidase N
JT727_16815	COG1473	amidohydrolase
JT727_16825	COG0814	amino acid
JT727_16850	COG1448	Aminotransferase
JT727_16855	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JT727_16860	COG3108	Peptidase M15
JT727_16865	COG2989	Protein conserved in bacteria
JT727_16875	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
JT727_16885	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JT727_16890	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JT727_16895	COG3173	Aminoglycoside phosphotransferase
JT727_16910	COG3214	Protein conserved in bacteria
JT727_16925	COG0658	competence protein
JT727_16925	COG2333	competence protein COMEC
JT727_16935	COG0539	negative regulation of cytoplasmic translation
JT727_16955	COG2323	membrane
JT727_16960	COG1944	ATP diphosphatase activity
JT727_16965	COG2116	formate transmembrane transporter activity
JT727_16970	COG1882	Formate acetyltransferase
JT727_16975	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JT727_16980	COG0477	Major facilitator Superfamily
JT727_16985	COG3302	dmso reductase anchor subunit
JT727_16990	COG0437	4 iron, 4 sulfur cluster binding
JT727_16995	COG0243	molybdopterin cofactor binding
JT727_17005	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JT727_17015	COG1178	ABC-type Fe3 transport system permease component
JT727_17015	COG1674	ftsk spoiiie
JT727_17025	COG0492	ferredoxin-NADP+ reductase activity
JT727_17030	COG4988	ABC transporter
JT727_17035	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JT727_17050	COG0542	response to heat
JT727_17060	COG1278	Cold shock
JT727_17070	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_17075	COG3593	DNA synthesis involved in DNA repair
JT727_17085	COG2431	L-lysine efflux transmembrane transporter activity
JT727_17095	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JT727_17105	COG0028	Belongs to the TPP enzyme family
JT727_17110	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
JT727_17115	COG0702	epimerase
JT727_17120	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JT727_17125	COG3023	N-Acetylmuramoyl-L-alanine amidase
JT727_17130	COG3706	GGDEF domain
JT727_17130	COG2203	Gaf domain
JT727_17130	COG5001	Diguanylate cyclase
JT727_17130	COG4251	negative regulation of phosphorylation
JT727_17140	COG1126	abc transporter atp-binding protein
JT727_17145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_17150	COG4215	(ABC) transporter
JT727_17155	COG4160	amino acid transport
JT727_17160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_17165	COG5002	protein histidine kinase activity
JT727_17170	COG0745	RESPONSE REGULATOR receiver
JT727_17185	COG1177	transmembrane transport
JT727_17190	COG1176	ABC-type spermidine putrescine transport system, permease component I
JT727_17195	COG3842	ATPase activity
JT727_17200	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JT727_17215	COG0778	Nitroreductase
JT727_17265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JT727_17300	COG3226	Transcriptional regulator
JT727_17305	COG0738	Major facilitator superfamily
JT727_17310	COG0561	phosphatase activity
JT727_17315	COG2814	Major facilitator Superfamily
JT727_17320	COG0671	phosphoesterase, PA-phosphatase related
JT727_17325	COG1349	DNA-binding transcription factor activity
JT727_17330	COG1686	Belongs to the peptidase S11 family
JT727_17340	COG0625	glutathione transferase activity
JT727_17345	COG2133	pyrroloquinoline quinone binding
JT727_17375	COG0747	negative chemotaxis
JT727_17390	COG0303	'Molybdopterin
JT727_17395	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JT727_17400	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JT727_17405	COG1882	Formate acetyltransferase
JT727_17410	COG0561	phosphatase activity
JT727_17420	COG1609	Transcriptional regulator
JT727_17425	COG2271	Major facilitator Superfamily
JT727_17435	COG0488	(ABC) transporter
JT727_17440	COG2365	Tyrosine phosphatase family
JT727_17445	COG1376	ErfK ybiS ycfS ynhG family protein
JT727_17450	COG2188	Transcriptional regulator
JT727_17455	COG2723	6-phospho-beta-galactosidase activity
JT727_17460	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JT727_17475	COG2194	sulfuric ester hydrolase activity
JT727_17480	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JT727_17495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_17500	COG0765	amino acid transport
JT727_17505	COG1126	abc transporter atp-binding protein
JT727_17510	COG0668	transmembrane transport
JT727_17520	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JT727_17530	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JT727_17540	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JT727_17545	COG1199	ATP-dependent helicase activity
JT727_17550	COG0513	Belongs to the DEAD box helicase family
JT727_17555	COG3958	Transketolase
JT727_17565	COG3959	Transketolase, thiamine diphosphate binding domain
JT727_17570	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_17575	COG2271	Major facilitator Superfamily
JT727_17585	COG0583	DNA-binding transcription factor activity
JT727_17590	COG1309	transcriptional regulator
JT727_17595	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_17600	COG1131	(ABC) transporter
JT727_17605	COG0842	Transport permease protein
JT727_17610	COG0842	Transport permease protein
JT727_17620	COG3568	Endonuclease Exonuclease Phosphatase
JT727_17625	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JT727_17630	COG0392	lysyltransferase activity
JT727_17635	COG0670	Belongs to the BI1 family
JT727_17640	COG0314	molybdopterin synthase activity
JT727_17645	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JT727_17655	COG0521	Mo-molybdopterin cofactor biosynthetic process
JT727_17675	COG0745	RESPONSE REGULATOR receiver
JT727_17680	COG0642	Histidine kinase
JT727_17705	COG2226	methyltransferase
JT727_17720	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JT727_17725	COG1881	PFAM PEBP family protein
JT727_17765	COG4677	pectinesterase activity
JT727_17775	COG0589	response to stress
JT727_17780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_17815	COG0789	Transcriptional regulator
JT727_17820	COG2200	EAL domain
JT727_17845	COG0561	phosphatase activity
JT727_17855	COG4149	molybdate abc transporter
JT727_17860	COG0725	ABC transporter, periplasmic molybdate-binding protein
JT727_17870	COG3585	molybdate ion transport
JT727_17870	COG2005	Transcriptional regulator
JT727_17875	COG1119	ATPase activity
JT727_17885	COG1085	galactose-1-phosphate uridylyltransferase
JT727_17895	COG2017	converts alpha-aldose to the beta-anomer
JT727_17905	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JT727_17920	COG3201	nicotinamide mononucleotide transporter
JT727_17925	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JT727_17970	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
JT727_17975	COG2885	chlorophyll binding
JT727_17985	COG3064	Membrane
JT727_17990	COG0848	biopolymer transport protein
JT727_17995	COG0811	peptide transport
JT727_18000	COG0824	Thioesterase
JT727_18005	COG3790	cyd operon protein YbgE
JT727_18010	COG4890	Cyd operon protein YbgT
JT727_18015	COG1294	oxidase, subunit
JT727_18020	COG1271	oxidase subunit
JT727_18025	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JT727_18035	COG0508	dehydrogenase complex catalyzes the overall conversion of
JT727_18040	COG0567	Dehydrogenase, E1 component
JT727_18045	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JT727_18050	COG1053	succinate dehydrogenase
JT727_18055	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JT727_18060	COG2009	succinate dehydrogenase
JT727_18095	COG1984	allophanate hydrolase subunit 2
JT727_18100	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JT727_18115	COG0415	Belongs to the DNA photolyase family
JT727_18145	COG2205	protein histidine kinase activity
JT727_18150	COG0745	RESPONSE REGULATOR receiver
JT727_18160	COG0033	Phosphoglucomutase
JT727_18170	COG0596	Alpha beta hydrolase
JT727_18185	COG0735	belongs to the Fur family
JT727_18225	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JT727_18230	COG1940	carbohydrate kinase activity
JT727_18230	COG1846	Transcriptional regulator
JT727_18235	COG0647	UMP catabolic process
JT727_18240	COG0367	asparagine synthase
JT727_18280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JT727_18290	COG1702	phosphate starvation-inducible protein PhoH
JT727_18315	COG0765	amino acid transport
JT727_18320	COG0765	amino acid transport
JT727_18325	COG1126	abc transporter atp-binding protein
JT727_18340	COG2888	peptidyl-tyrosine sulfation
JT727_18355	COG1466	dna polymerase III delta subunit
JT727_18370	COG0799	negative regulation of ribosome biogenesis
JT727_18380	COG0768	penicillin binding
JT727_18385	COG0772	Belongs to the SEDS family
JT727_18390	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JT727_18395	COG1686	Belongs to the peptidase S11 family
JT727_18410	COG0583	DNA-binding transcription factor activity
JT727_18425	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JT727_18445	COG3069	C4-dicarboxylate transmembrane transporter activity
JT727_18450	COG3719	Belongs to the RNase T2 family
JT727_18455	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JT727_18475	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JT727_18480	COG0583	DNA-binding transcription factor activity
JT727_18485	COG3969	phosphoadenosine phosphosulfate
JT727_18490	COG1475	DNA binding
JT727_18495	COG0436	Aminotransferase
JT727_18520	COG1129	ABC transporter
JT727_18525	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_18530	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_18540	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JT727_18555	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JT727_18565	COG0402	S-adenosylhomocysteine deaminase activity
JT727_18575	COG0483	inositol monophosphate 1-phosphatase activity
JT727_18580	COG2271	Major facilitator Superfamily
JT727_18610	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_18615	COG1129	ABC transporter
JT727_18620	COG0371	Dehydrogenase
JT727_18625	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_18640	COG2879	small protein
JT727_18645	COG1966	Carbon starvation protein
JT727_18655	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_18660	COG1535	isochorismatase
JT727_18660	COG3433	isochorismatase activity
JT727_18665	COG1021	2,3-dihydroxybenzoate-AMP ligase
JT727_18670	COG1169	isochorismate synthase
JT727_18675	COG4592	Periplasmic binding protein
JT727_18685	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_18690	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_18695	COG1120	ATPase activity
JT727_18700	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JT727_18700	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JT727_18705	COG3251	PFAM MbtH domain protein
JT727_18710	COG2382	esterase
JT727_18715	COG4771	TonB-dependent receptor
JT727_18725	COG1879	ABC-type sugar transport system periplasmic component
JT727_18735	COG1129	ABC transporter
JT727_18740	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_18745	COG5464	transposase or invertase
JT727_18750	COG2390	Transcriptional regulator
JT727_18755	COG3959	Transketolase, thiamine diphosphate binding domain
JT727_18760	COG3958	Transketolase
JT727_18770	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JT727_18780	COG0583	DNA-binding transcription factor activity
JT727_18805	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JT727_18830	COG0747	negative chemotaxis
JT727_18835	COG0601	transmembrane transport
JT727_18840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JT727_18845	COG0444	Belongs to the ABC transporter superfamily
JT727_18850	COG4608	Belongs to the ABC transporter superfamily
JT727_18855	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JT727_18860	COG4221	oxidoreductase activity
JT727_18870	COG4215	(ABC) transporter
JT727_18875	COG0765	amino acid transport
JT727_18880	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JT727_18895	COG0697	spore germination
JT727_18910	COG4608	Belongs to the ABC transporter superfamily
JT727_18915	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JT727_18935	COG3698	Phosphodiester glycosidase
JT727_18975	COG2315	Protein conserved in bacteria
JT727_18980	COG0778	Nitroreductase
JT727_19005	COG0477	Major facilitator Superfamily
JT727_19010	COG0668	transmembrane transport
JT727_19015	COG1609	Transcriptional regulator
JT727_19025	COG0673	inositol 2-dehydrogenase activity
JT727_19035	COG2211	Major facilitator Superfamily
JT727_19040	COG1113	amino acid transport
JT727_19055	COG1012	belongs to the aldehyde dehydrogenase family
JT727_19060	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JT727_19070	COG0531	amino acid
JT727_19085	COG4680	protein conserved in bacteria
JT727_19125	COG0667	Aldo Keto reductase
JT727_19130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_19135	COG1473	amidohydrolase
JT727_19165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_19170	COG1120	ATPase activity
JT727_19175	COG1566	PFAM secretion protein HlyD family protein
JT727_19220	COG4211	Belongs to the binding-protein-dependent transport system permease family
JT727_19225	COG1129	ABC transporter
JT727_19240	COG0673	inositol 2-dehydrogenase activity
JT727_19270	COG3104	oligopeptide transport
JT727_19275	COG1982	Orn Lys Arg decarboxylase major
JT727_19280	COG0531	amino acid
JT727_19285	COG3710	Transcriptional regulator
JT727_19295	COG1560	Kdo2-lipid A biosynthetic process
JT727_19310	COG3188	usher protein
JT727_19315	COG3121	Chaperone
JT727_19320	COG3539	Fimbrial protein
JT727_19430	COG4386	tail sheath protein
JT727_19510	COG3772	lysozyme
JT727_19695	COG2501	S4 domain
JT727_19705	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JT727_19720	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JT727_19725	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JT727_19745	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
JT727_19750	COG4181	ATPase activity
JT727_19755	COG2755	lipolytic protein G-D-S-L family
JT727_19760	COG0300	oxidoreductase activity
JT727_19765	COG3118	belongs to the thioredoxin family
JT727_19770	COG0390	transport system, permease component
JT727_19775	COG4619	ABC transporter
JT727_19780	COG0330	HflC and HflK could
JT727_19785	COG1585	Membrane protein implicated in regulation of membrane protease activity
JT727_19800	COG3735	TraB family
JT727_19805	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JT727_19815	COG2223	nitrite transmembrane transporter activity
JT727_19820	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JT727_19820	COG4651	solute:proton antiporter activity
JT727_19825	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JT727_19865	COG2832	Protein of unknown function (DUF454)
JT727_19870	COG3923	Primosomal replication protein n
JT727_19880	COG5464	transposase or invertase
JT727_19885	COG1196	nuclear chromosome segregation
JT727_19885	COG3264	Mechanosensitive ion channel
JT727_19890	COG1309	transcriptional regulator
JT727_19895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_19900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JT727_19915	COG0110	maltose O-acetyltransferase activity
JT727_19965	COG1874	Beta-galactosidase
JT727_19970	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JT727_19975	COG3833	ABC-type maltose transport systems, permease component
JT727_19980	COG1175	transmembrane transport
JT727_19985	COG2182	Extracellular solute-binding protein
JT727_19995	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JT727_20010	COG2364	Membrane
JT727_20040	COG3695	enzyme binding
JT727_20045	COG3126	Type III secretion system lipoprotein chaperone (YscW)
JT727_20050	COG1946	Acyl-CoA thioesterase
JT727_20055	COG0004	ammonium transporteR
JT727_20060	COG0347	Belongs to the P(II) protein family
JT727_20065	COG1132	(ABC) transporter
JT727_20070	COG1132	(ABC) transporter
JT727_20075	COG1522	sequence-specific DNA binding
JT727_20090	COG4533	DNA binding
JT727_20100	COG0824	Thioesterase
JT727_20105	COG1555	photosystem II stabilization
JT727_20110	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JT727_20115	COG0776	regulation of translation
JT727_20120	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JT727_20140	COG0271	Belongs to the BolA IbaG family
JT727_20145	COG3056	Lipoprotein
JT727_20150	COG2223	nitrite transmembrane transporter activity
JT727_20155	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JT727_20160	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JT727_20165	COG1845	cytochrome c oxidase, subunit III
JT727_20170	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JT727_20185	COG1414	Transcriptional regulator
JT727_20190	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JT727_20195	COG1053	succinate dehydrogenase
JT727_20205	COG1053	succinate dehydrogenase
JT727_20220	COG0673	inositol 2-dehydrogenase activity
JT727_20225	COG2814	Major facilitator Superfamily
JT727_20235	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JT727_20240	COG0693	protein deglycase activity
JT727_20260	COG0142	geranyltranstransferase activity
JT727_20270	COG0667	Aldo Keto reductase
JT727_20275	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JT727_20295	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JT727_20295	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JT727_20305	COG4238	major outer membrane lipoprotein
JT727_20325	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JT727_20330	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JT727_20335	COG1862	Preprotein translocase
JT727_20360	COG0450	alkyl hydroperoxide reductase
JT727_20365	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_20380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JT727_20390	COG1228	amidohydrolase
JT727_20400	COG1335	isochorismatase
JT727_20405	COG0583	DNA-binding transcription factor activity
JT727_20410	COG0366	Alpha amylase catalytic
JT727_20435	COG0420	3'-5' exonuclease activity
JT727_20440	COG0419	ATPase involved in DNA repair
JT727_20445	COG1940	carbohydrate kinase activity
JT727_20460	COG4126	flavin adenine dinucleotide binding
JT727_20470	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JT727_20475	COG3416	Protein conserved in bacteria
JT727_20485	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JT727_20495	COG1785	Belongs to the alkaline phosphatase family
JT727_20535	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
JT727_20540	COG1335	isochorismatase
JT727_20545	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JT727_20550	COG0113	porphobilinogen synthase activity
JT727_20555	COG1943	Transposase
JT727_20565	COG2175	clavaminate synthase activity
JT727_20570	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JT727_20575	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
JT727_20580	COG4521	taurine ABC transporter
JT727_20585	COG2040	homocysteine
JT727_20590	COG0833	amino acid
JT727_20605	COG4303	Ethanolamine ammonia lyase large subunit
JT727_20610	COG4302	ethanolamine ammonia-lyase activity
JT727_20650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_20655	COG1126	abc transporter atp-binding protein
JT727_20660	COG4597	amino acid ABC transporter
JT727_20665	COG0765	amino acid transport
JT727_20680	COG3188	usher protein
JT727_20705	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
JT727_20715	COG3639	organic phosphonate transmembrane transporter activity
JT727_20740	COG0791	NLP P60 protein
JT727_20775	COG3188	usher protein
JT727_20780	COG3121	Chaperone
JT727_20785	COG3539	Fimbrial protein
JT727_20800	COG3710	Transcriptional regulator
JT727_20830	COG2200	EAL domain
JT727_20850	COG3121	Chaperone
JT727_20875	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JT727_20890	COG0579	oxidoreductase
JT727_20895	COG1012	belongs to the aldehyde dehydrogenase family
JT727_20915	COG1113	amino acid transport
JT727_20920	COG1802	Transcriptional regulator
JT727_20930	COG0583	DNA-binding transcription factor activity
JT727_20940	COG1028	Short-chain dehydrogenase reductase Sdr
JT727_20970	COG2195	Cleaves the N-terminal amino acid of tripeptides
JT727_20975	COG0454	-acetyltransferase
JT727_20990	COG2991	Protein conserved in bacteria
JT727_21005	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JT727_21010	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JT727_21025	COG3034	peptidoglycan biosynthetic process
JT727_21030	COG0121	glutamine amidotransferase
JT727_21040	COG1960	acyl-CoA dehydrogenase activity
JT727_21045	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JT727_21055	COG0583	DNA-binding transcription factor activity
JT727_21065	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JT727_21075	COG2226	methyltransferase
JT727_21085	COG0741	lytic transglycosylase activity
JT727_21085	COG1388	LysM domain
JT727_21090	COG2226	methyltransferase
JT727_21100	COG2814	Major facilitator Superfamily
JT727_21105	COG0583	DNA-binding transcription factor activity
JT727_21110	COG0656	L-ascorbic acid biosynthetic process
JT727_21145	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JT727_21155	COG2011	ABC-type metal ion transport system permease component
JT727_21160	COG1464	Belongs to the NlpA lipoprotein family
JT727_21170	COG1720	tRNA m6t6A37 methyltransferase activity
JT727_21180	COG0791	NLP P60 protein
JT727_21185	COG3015	lipoprotein NlpE involved in copper resistance
JT727_21190	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JT727_21205	COG4568	rho-dependent transcription termination
JT727_21215	COG0346	lactoylglutathione lyase activity
JT727_21220	COG1982	Orn Lys Arg decarboxylase major
JT727_21230	COG0587	DNA-directed DNA polymerase activity
JT727_21260	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
JT727_21270	COG0750	zinc metalloprotease
JT727_21275	COG0575	Belongs to the CDS family
JT727_21285	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JT727_21310	COG0024	Methionine aminopeptidase
JT727_21315	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JT727_21330	COG3835	regulator
JT727_21335	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JT727_21355	COG2860	membrane
JT727_21375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JT727_21380	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JT727_21385	COG1120	ATPase activity
JT727_21390	COG4774	siderophore transport
JT727_21395	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JT727_21490	COG1643	Atp-dependent helicase
JT727_21495	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JT727_21515	COG0617	tRNA 3'-terminal CCA addition
JT727_21520	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JT727_21540	COG0726	polysaccharide deacetylase
JT727_21545	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_21550	COG0842	Transport permease protein
JT727_21555	COG1131	(ABC) transporter
JT727_21560	COG0288	reversible hydration of carbon dioxide
JT727_21575	COG4993	Dehydrogenase
JT727_21580	COG2132	Multicopper oxidase
JT727_21625	COG3064	Membrane
JT727_21640	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JT727_21645	COG0508	dehydrogenase complex catalyzes the overall conversion of
JT727_21650	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JT727_21655	COG2186	Transcriptional regulator
JT727_21660	COG1113	amino acid transport
JT727_21665	COG2211	Major facilitator Superfamily
JT727_21670	COG3940	Belongs to the glycosyl hydrolase 43 family
JT727_21675	COG3725	Membrane protein required for beta-lactamase induction
JT727_21680	COG3023	N-Acetylmuramoyl-L-alanine amidase
JT727_21690	COG4969	Belongs to the N-Me-Phe pilin family
JT727_21695	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JT727_21700	COG1459	type II secretion system
JT727_21725	COG0494	nUDIX hydrolase
JT727_21745	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JT727_21750	COG0849	cell division
JT727_21775	COG0772	Belongs to the SEDS family
JT727_21790	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JT727_21795	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JT727_21800	COG0768	penicillin binding
JT727_21820	COG1609	Transcriptional regulator
JT727_21830	COG0028	Belongs to the TPP enzyme family
JT727_21875	COG0738	Major facilitator superfamily
JT727_21890	COG2271	Major facilitator Superfamily
JT727_21895	COG2814	Major facilitator Superfamily
JT727_21915	COG1178	ABC-type Fe3 transport system permease component
JT727_21925	COG0586	Pfam SNARE associated Golgi protein
JT727_21945	COG0235	Class ii aldolase
JT727_21950	COG0417	DNA replication proofreading
JT727_21960	COG0564	pseudouridine synthase activity
JT727_21970	COG3493	citrate carrier protein
JT727_21985	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JT727_21990	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JT727_22000	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JT727_22045	COG0505	Belongs to the CarA family
JT727_22055	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JT727_22065	COG3152	Membrane
JT727_22080	COG1047	Peptidyl-prolyl cis-trans
JT727_22095	COG0196	riboflavin kinase activity
JT727_22105	COG0583	DNA-binding transcription factor activity
JT727_22130	COG4735	regulation of single-species biofilm formation
JT727_22135	COG1584	GPR1 FUN34 yaaH family protein
JT727_22140	COG0477	Major facilitator Superfamily
JT727_22145	COG0521	Mo-molybdopterin cofactor biosynthetic process
JT727_22150	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JT727_22155	COG1115	amino acid carrier protein
JT727_22170	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JT727_22180	COG0527	aspartate kinase activity
JT727_22180	COG0460	homoserine dehydrogenase
JT727_22190	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
JT727_22200	COG0745	RESPONSE REGULATOR receiver
JT727_22205	COG4452	Inner membrane protein CreD
JT727_22210	COG2205	protein histidine kinase activity
JT727_22215	COG0745	RESPONSE REGULATOR receiver
JT727_22220	COG3045	CreA protein
JT727_22225	COG3708	Transcriptional regulator
JT727_22225	COG2207	Transcriptional regulator
JT727_22245	COG0741	lytic transglycosylase activity
JT727_22250	COG0488	(ABC) transporter
JT727_22260	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JT727_22265	COG0560	Phosphoserine phosphatase
JT727_22270	COG3726	membrane protein affecting hemolysin expression
JT727_22300	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JT727_22305	COG0084	hydrolase, TatD family'
JT727_22310	COG4667	esterase of the alpha-beta hydrolase superfamily
JT727_22320	COG2823	Periplasmic or secreted lipoprotein
JT727_22330	COG1011	Hydrolase
JT727_22335	COG0456	acetyltransferase
JT727_22340	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
JT727_22375	COG3706	GGDEF domain
JT727_22380	COG4114	ferric iron reductase
JT727_22385	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_22385	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_22390	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JT727_22395	COG2197	response regulator
JT727_22400	COG2197	response regulator
JT727_22415	COG2966	Psort location CytoplasmicMembrane, score
JT727_22430	COG1484	DNA-dependent DNA replication
JT727_22445	COG5464	transposase or invertase
JT727_22455	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JT727_22460	COG3716	PTS system mannose fructose sorbose family IID component
JT727_22465	COG3715	PTS system
JT727_22480	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JT727_22480	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JT727_22490	COG1063	alcohol dehydrogenase
JT727_22495	COG1802	Transcriptional regulator
JT727_22500	COG2271	Major facilitator Superfamily
JT727_22505	COG1214	PFAM Peptidase M22, glycoprotease
JT727_22505	COG0456	acetyltransferase
JT727_22515	COG1737	Transcriptional regulator
JT727_22520	COG0800	Aldolase
JT727_22525	COG3734	2-keto-3-deoxy-galactonokinase
JT727_22540	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
JT727_22565	COG1846	Transcriptional regulator
JT727_22575	COG0179	Fumarylacetoacetate (FAA) hydrolase
JT727_22585	COG1012	belongs to the aldehyde dehydrogenase family
JT727_22590	COG3384	dioxygenase
JT727_22600	COG3971	2-oxopent-4-enoate hydratase activity
JT727_22620	COG2368	4-hydroxyphenylacetate
JT727_22625	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JT727_22640	COG1966	Carbon starvation protein
JT727_22645	COG2879	small protein
JT727_22650	COG0523	cobalamin synthesis protein
JT727_22660	COG1012	belongs to the aldehyde dehydrogenase family
JT727_22665	COG5464	transposase or invertase
JT727_22670	COG2207	Transcriptional regulator
JT727_22670	COG1917	Cupin 2, conserved barrel domain protein
JT727_22680	COG2733	membrane
JT727_22695	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
JT727_22700	COG1924	4 iron, 4 sulfur cluster binding
JT727_22715	COG1566	PFAM secretion protein HlyD family protein
JT727_22725	COG5457	Domain of unknown function (DUF1127)
JT727_22730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JT727_22740	COG0583	DNA-binding transcription factor activity
JT727_22745	COG2249	NAD(P)H dehydrogenase (quinone) activity
JT727_22755	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_22760	COG1129	ABC transporter
JT727_22765	COG1879	ABC-type sugar transport system periplasmic component
JT727_22775	COG3706	GGDEF domain
JT727_22780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_22785	COG0842	Transport permease protein
JT727_22785	COG1129	ABC transporter
JT727_22790	COG0842	Transport permease protein
JT727_22820	COG2850	peptidyl-arginine hydroxylation
JT727_22835	COG5002	protein histidine kinase activity
JT727_22840	COG0745	RESPONSE REGULATOR receiver
JT727_22845	COG1538	Outer membrane efflux protein
JT727_22850	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_22855	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JT727_22860	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JT727_22870	COG3040	lipid binding
JT727_22875	COG0789	Transcriptional regulator
JT727_22885	COG0300	oxidoreductase activity
JT727_22900	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JT727_22920	COG3272	Protein of unknown function (DUF1722)
JT727_22925	COG4580	involved in the transport of maltose and maltodextrins
JT727_22930	COG2115	Belongs to the xylose isomerase family
JT727_22935	COG2211	Major facilitator Superfamily
JT727_22940	COG3507	Belongs to the glycosyl hydrolase 43 family
JT727_22960	COG1216	Glycosyl transferase, family 2
JT727_23010	COG1715	Restriction endonuclease
JT727_23045	COG0582	viral genome integration into host DNA
JT727_23085	COG3634	alkyl hydroperoxide reductase activity
JT727_23090	COG1959	2 iron, 2 sulfur cluster binding
JT727_23110	COG4977	sequence-specific DNA binding
JT727_23125	COG2814	Major facilitator Superfamily
JT727_23130	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JT727_23135	COG0583	DNA-binding transcription factor activity
JT727_23155	COG0477	Major facilitator Superfamily
JT727_23160	COG1012	belongs to the aldehyde dehydrogenase family
JT727_23165	COG2084	Dehydrogenase
JT727_23170	COG0583	DNA-binding transcription factor activity
JT727_23180	COG0288	reversible hydration of carbon dioxide
JT727_23185	COG0659	secondary active sulfate transmembrane transporter activity
JT727_23190	COG1064	alcohol dehydrogenase
JT727_23195	COG1175	transmembrane transport
JT727_23200	COG0395	ABC-type sugar transport system, permease component
JT727_23205	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JT727_23210	COG3842	ATPase activity
JT727_23225	COG1082	Xylose isomerase domain protein TIM barrel
JT727_23235	COG3962	Belongs to the TPP enzyme family
JT727_23240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JT727_23245	COG0837	glucose binding
JT727_23245	COG1737	Transcriptional regulator
JT727_23250	COG3718	enzyme involved in inositol metabolism
JT727_23265	COG0433	COG0433 Predicted ATPase
JT727_23270	COG0795	lipopolysaccharide-transporting ATPase activity
JT727_23275	COG0795	lipopolysaccharide-transporting ATPase activity
JT727_23285	COG2927	DNA polymerase III (CHI subunit)
JT727_23290	COG0525	valine-tRNA ligase activity
JT727_23315	COG2731	YhcH YjgK YiaL family protein
JT727_23350	COG1263	PTS System
JT727_23350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JT727_23355	COG0366	Alpha amylase catalytic
JT727_23360	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JT727_23365	COG1486	melibiose metabolic process
JT727_23390	COG0602	queuosine metabolic process
JT727_23395	COG2026	Addiction module toxin, RelE StbE family
JT727_23400	COG3077	Addiction module antitoxin, RelB DinJ family
JT727_23405	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JT727_23405	COG3711	transcriptional antiterminator
JT727_23410	COG2706	6-phosphogluconolactonase activity
JT727_23425	COG3964	amidohydrolase
JT727_23465	COG0312	modulator of DNA gyrase
JT727_23495	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JT727_23505	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_23510	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_23515	COG1129	ABC transporter
JT727_23520	COG1879	ABC-type sugar transport system periplasmic component
JT727_23535	COG2105	PFAM AIG2 family protein
JT727_23540	COG2911	Protein conserved in bacteria
JT727_23545	COG0729	surface antigen
JT727_23580	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JT727_23585	COG1609	Transcriptional regulator
JT727_23590	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JT727_23595	COG1253	flavin adenine dinucleotide binding
JT727_23620	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
JT727_23635	COG1733	regulation of RNA biosynthetic process
JT727_23640	COG0702	epimerase
JT727_23650	COG0697	spore germination
JT727_23660	COG1113	amino acid transport
JT727_23665	COG0545	Peptidyl-prolyl cis-trans isomerase
JT727_23670	COG3061	Opacity-associated protein A
JT727_23680	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JT727_23685	COG2965	DNA replication, synthesis of RNA primer
JT727_23745	COG1073	alpha beta
JT727_23750	COG3650	response to hydrogen peroxide
JT727_23760	COG1960	acyl-CoA dehydrogenase activity
JT727_23765	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JT727_23770	COG0557	exoribonuclease II activity
JT727_23785	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
JT727_23795	COG0330	HflC and HflK could
JT727_23800	COG0330	HflC and HflK could
JT727_23805	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JT727_23830	COG0802	atpase or kinase
JT727_23835	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JT727_23835	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JT727_23840	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JT727_23860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JT727_23880	COG3264	Mechanosensitive ion channel
JT727_23880	COG1511	domain protein
JT727_23895	COG1053	succinate dehydrogenase
JT727_23900	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JT727_23920	COG2076	Multidrug Resistance protein
JT727_23925	COG5510	response to toxic substance
JT727_23940	COG1509	lysine 2,3-aminomutase activity
JT727_24025	COG0531	amino acid
JT727_24030	COG3030	protein affecting phage T7 exclusion by the F plasmid
JT727_24035	COG1027	Aspartate ammonia-lyase
JT727_24040	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JT727_24055	COG1309	transcriptional regulator
JT727_24105	COG0457	Tetratricopeptide repeat
JT727_24110	COG0726	polysaccharide deacetylase
JT727_24110	COG1649	PFAM Uncharacterised BCR, COG1649
JT727_24115	COG1215	transferase activity, transferring glycosyl groups
JT727_24130	COG0861	Integral membrane protein TerC family
JT727_24170	COG1486	melibiose metabolic process
JT727_24175	COG2169	Transcriptional regulator
JT727_24185	COG2824	Alkylphosphonate utilization operon protein PhnA
JT727_24190	COG2764	glyoxalase bleomycin resistance protein dioxygenase
JT727_24195	COG2188	Transcriptional regulator
JT727_24200	COG3624	Phosphonate C-P lyase system protein PhnG
JT727_24205	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
JT727_24210	COG3626	phosphonate metabolism
JT727_24215	COG3627	carbon phosphorus lyase activity
JT727_24220	COG4107	phosphonate C-P lyase system protein PhnK
JT727_24225	COG4778	phosphonate C-P lyase system protein PhnL
JT727_24230	COG3454	Phosphonate metabolism
JT727_24240	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JT727_24250	COG4191	Histidine kinase
JT727_24250	COG0784	Response regulator, receiver
JT727_24255	COG1129	ABC transporter
JT727_24260	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_24285	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JT727_24290	COG1301	dicarboxylic acid transport
JT727_24300	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JT727_24305	COG3162	membrane
JT727_24335	COG3539	Fimbrial protein
JT727_24340	COG1346	cytolysis
JT727_24345	COG1380	Effector of murein hydrolase LrgA
JT727_24350	COG0583	DNA-binding transcription factor activity
JT727_24355	COG0025	NhaP-type Na H and K H
JT727_24360	COG2252	PERMEase
JT727_24365	COG0625	glutathione transferase activity
JT727_24370	COG0789	Transcriptional regulator
JT727_24380	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JT727_24410	COG1234	tRNA 3'-trailer cleavage
JT727_24415	COG1609	Transcriptional regulator
JT727_24420	COG0483	inositol monophosphate 1-phosphatase activity
JT727_24430	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JT727_24450	COG4771	TonB-dependent receptor
JT727_24455	COG0741	lytic transglycosylase activity
JT727_24470	COG2315	Protein conserved in bacteria
JT727_24475	COG0432	Pfam Uncharacterised protein family UPF0047
JT727_24490	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JT727_24495	COG0305	Participates in initiation and elongation during chromosome replication
JT727_24510	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JT727_24520	COG0735	belongs to the Fur family
JT727_24525	COG3237	CsbD-like
JT727_24535	COG0534	Mate efflux family protein
JT727_24545	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JT727_24615	COG0251	oxidation-reduction process
JT727_24625	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JT727_24635	COG0527	aspartate kinase activity
JT727_24685	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JT727_24695	COG0456	acetyltransferase
JT727_24725	COG0151	Belongs to the GarS family
JT727_24735	COG4191	Histidine kinase
JT727_24740	COG3678	ATP-independent chaperone mediated protein folding
JT727_24775	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
JT727_24790	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JT727_24795	COG2104	thiamine diphosphate biosynthetic process
JT727_24810	COG3706	GGDEF domain
JT727_24820	COG1447	Phosphotransferase system cellobiose-specific component IIA
JT727_24825	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JT727_24860	COG0250	Participates in transcription elongation, termination and antitermination
JT727_24905	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JT727_24935	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
JT727_24945	COG1739	Uncharacterized protein family UPF0029
JT727_24985	COG0805	protein transport
JT727_25005	COG3165	ubiquinone biosynthetic process from chorismate
JT727_25035	COG0583	DNA-binding transcription factor activity
JT727_25040	COG0697	spore germination
JT727_25045	COG0561	phosphatase activity
JT727_25050	COG2267	carboxylic ester hydrolase activity
JT727_25055	COG1280	lysine exporter protein (LysE YggA)
JT727_25065	COG1280	lysine exporter protein (LysE YggA)
JT727_25095	COG0210	DNA helicase
JT727_25100	COG1011	Hydrolase
JT727_25130	COG3072	Adenylate cyclase
JT727_25145	COG2959	enzyme of heme biosynthesis
JT727_25150	COG3071	HemY protein
JT727_25195	COG2244	polysaccharide biosynthetic process
JT727_25200	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JT727_25205	COG0456	acetyltransferase
JT727_25210	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JT727_25215	COG1088	dTDP-glucose 4,6-dehydratase activity
JT727_25220	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JT727_25225	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JT727_25235	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JT727_25240	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JT727_25245	COG3118	belongs to the thioredoxin family
JT727_25270	COG1811	Na channel or pump
JT727_25280	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JT727_25285	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JT727_25295	COG0583	DNA-binding transcription factor activity
JT727_25300	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JT727_25315	COG3978	acetolactate synthase activity
JT727_25340	COG3085	chromosome segregation
JT727_25415	COG0583	DNA-binding transcription factor activity
JT727_25430	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JT727_25445	COG3443	Belongs to the bacterial solute-binding protein 9 family
JT727_25450	COG2207	Transcriptional regulator
JT727_25460	COG0371	Dehydrogenase
JT727_25465	COG0697	spore germination
JT727_25475	COG0583	DNA-binding transcription factor activity
JT727_25485	COG0737	Belongs to the 5'-nucleotidase family
JT727_25495	COG0460	homoserine dehydrogenase
JT727_25495	COG0527	aspartate kinase activity
JT727_25500	COG0626	cystathionine gamma-synthase activity
JT727_25515	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JT727_25520	COG1609	Transcriptional regulator
JT727_25525	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JT727_25540	COG1575	Belongs to the MenA family. Type 1 subfamily
JT727_25560	COG3678	ATP-independent chaperone mediated protein folding
JT727_25565	COG0745	RESPONSE REGULATOR receiver
JT727_25570	COG2205	protein histidine kinase activity
JT727_25575	COG2258	MOSC domain
JT727_25580	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JT727_25620	COG1129	ABC transporter
JT727_25625	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_25630	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_25635	COG1454	alcohol dehydrogenase
JT727_25645	COG2211	Major facilitator Superfamily
JT727_25690	COG0437	4 iron, 4 sulfur cluster binding
JT727_25695	COG2864	formate dehydrogenase
JT727_25710	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JT727_25720	COG0456	acetyltransferase
JT727_25735	COG1011	Hydrolase
JT727_25750	COG3852	Histidine kinase
JT727_25765	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JT727_25785	COG0204	Acyl-transferase
JT727_25795	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JT727_25800	COG3084	Protein conserved in bacteria
JT727_25810	COG1763	Mo-molybdopterin cofactor biosynthetic process
JT727_25835	COG2186	Transcriptional regulator
JT727_25840	COG0477	Major facilitator Superfamily
JT727_25845	COG1609	Transcriptional regulator
JT727_25850	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JT727_25860	COG1172	Belongs to the binding-protein-dependent transport system permease family
JT727_25865	COG1129	ABC transporter
JT727_25895	COG1522	sequence-specific DNA binding
JT727_25900	COG0716	FMN binding
JT727_25915	COG3312	ion transport
JT727_25965	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JT727_25970	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JT727_25975	COG0573	inorganic phosphate transmembrane transporter activity
JT727_25980	COG0581	inorganic phosphate transmembrane transporter activity
JT727_25985	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JT727_25990	COG0704	Plays a role in the regulation of phosphate uptake
JT727_26000	COG2382	esterase
JT727_26005	COG0363	glucosamine-6-phosphate deaminase activity
JT727_26010	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JT727_26015	COG2252	PERMEase
JT727_26020	COG0431	NADPH-dependent FMN reductase
JT727_26025	COG2091	lysine biosynthetic process via aminoadipic acid
JT727_26055	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JT727_26095	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
JT727_26160	COG1196	nuclear chromosome segregation
JT727_26170	COG4372	Transposase
JT727_26175	COG3436	PFAM IS66 Orf2 family protein
JT727_26250	COG2135	peptidase activity
JT727_26420	COG0110	maltose O-acetyltransferase activity
JT727_26450	COG3344	reverse transcriptase
JT727_26470	COG3041	Addiction module toxin RelE StbE family
JT727_26475	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JT727_26550	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
JT727_26580	COG1484	DNA-dependent DNA replication
JT727_26585	COG4584	PFAM Integrase catalytic
JT727_26715	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JT727_26810	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JT727_26855	COG4584	PFAM Integrase catalytic
JT727_26860	COG1484	DNA-dependent DNA replication