locus-tag	class	description
BB784_00020	COG0187	DNA topoisomerase II activity
BB784_00025	COG0561	phosphatase activity
BB784_00040	COG2186	Transcriptional regulator
BB784_00045	COG3734	2-keto-3-deoxy-galactonokinase
BB784_00050	COG0800	Aldolase
BB784_00060	COG2271	Major facilitator Superfamily
BB784_00065	COG0823	Involved in the tonB-independent uptake of proteins
BB784_00070	COG5645	(Lipo)protein
BB784_00095	COG2188	Transcriptional regulator
BB784_00110	COG2149	membrane
BB784_00130	COG2610	gluconate transmembrane transporter activity
BB784_00140	COG0583	DNA-binding transcription factor activity
BB784_00145	COG2814	Major facilitator Superfamily
BB784_00175	COG0028	Belongs to the TPP enzyme family
BB784_00180	COG0440	acetolactate synthase activity
BB784_00185	COG2197	response regulator
BB784_00195	COG2271	Major facilitator Superfamily
BB784_00240	COG2188	Transcriptional regulator
BB784_00265	COG4580	involved in the transport of maltose and maltodextrins
BB784_00270	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB784_00275	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_00275	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_00285	COG1609	Transcriptional regulator
BB784_00295	COG3384	dioxygenase
BB784_00300	COG0583	DNA-binding transcription factor activity
BB784_00305	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BB784_00310	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BB784_00315	COG2828	Protein conserved in bacteria
BB784_00330	COG0697	spore germination
BB784_00335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_00335	COG1263	PTS System
BB784_00345	COG2814	Major facilitator Superfamily
BB784_00350	COG1538	Outer membrane efflux protein
BB784_00355	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB784_00360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_00400	COG0583	DNA-binding transcription factor activity
BB784_00425	COG1464	Belongs to the NlpA lipoprotein family
BB784_00440	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BB784_00450	COG1064	alcohol dehydrogenase
BB784_00515	COG2211	Major facilitator Superfamily
BB784_00520	COG1501	Belongs to the glycosyl hydrolase 31 family
BB784_00530	COG1486	melibiose metabolic process
BB784_00535	COG1263	PTS System
BB784_00535	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_00540	COG2982	Protein involved in outer membrane biogenesis
BB784_00545	COG2233	PERMEase
BB784_00555	COG0786	glutamate:sodium symporter activity
BB784_00570	COG3074	FtsZ-dependent cytokinesis
BB784_00575	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BB784_00600	COG3152	Membrane
BB784_00610	COG1494	fructose-1,6-bisphosphatase
BB784_00615	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BB784_00620	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BB784_00625	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BB784_00645	COG2860	membrane
BB784_00655	COG2169	Transcriptional regulator
BB784_00655	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BB784_00700	COG1561	YicC-like family, N-terminal region
BB784_00730	COG1131	(ABC) transporter
BB784_00735	COG0842	Transport permease protein
BB784_00760	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BB784_00795	COG1519	Transferase
BB784_00800	COG1216	Glycosyl transferase, family 2
BB784_00805	COG0438	transferase activity, transferring glycosyl groups
BB784_00815	COG0859	PFAM glycosyl transferase family 9
BB784_00840	COG0859	PFAM glycosyl transferase family 9
BB784_00855	COG0156	8-amino-7-oxononanoate synthase activity
BB784_00865	COG0463	Glycosyl transferase, family 2
BB784_00870	COG2861	carbohydrate metabolic process
BB784_00875	COG4942	peptidase
BB784_00885	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BB784_00890	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BB784_00910	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BB784_00920	COG2186	Transcriptional regulator
BB784_00940	COG3722	fumarate hydratase activity
BB784_00960	COG1566	PFAM secretion protein HlyD family protein
BB784_00965	COG0625	glutathione transferase activity
BB784_00975	COG3276	selenocysteine insertion sequence binding
BB784_00980	COG1414	Transcriptional regulator
BB784_00985	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB784_00990	COG3977	Valine--pyruvate aminotransferase
BB784_00995	COG0366	Alpha amylase catalytic
BB784_01005	COG2992	FlgJ-related protein
BB784_01010	COG1609	Transcriptional regulator
BB784_01010	COG2207	Transcriptional regulator
BB784_01015	COG4214	carbohydrate transport
BB784_01020	COG1129	ABC transporter
BB784_01025	COG4213	ABC transporter substrate-binding protein
BB784_01045	COG4682	membrane
BB784_01050	COG4682	membrane
BB784_01055	COG3274	enterobacterial common antigen metabolic process
BB784_01090	COG1278	Cold shock
BB784_01095	COG2944	sequence-specific DNA binding
BB784_01100	COG2814	Major facilitator Superfamily
BB784_01120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB784_01130	COG1609	Transcriptional regulator
BB784_01140	COG2885	chlorophyll binding
BB784_01145	COG0243	molybdopterin cofactor binding
BB784_01150	COG0456	acetyltransferase
BB784_01155	COG2818	Glycosylase
BB784_01160	COG5571	outer membrane autotransporter
BB784_01165	COG2223	nitrite transmembrane transporter activity
BB784_01200	COG0747	negative chemotaxis
BB784_01205	COG0601	transmembrane transport
BB784_01210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB784_01215	COG0444	Belongs to the ABC transporter superfamily
BB784_01220	COG4608	Belongs to the ABC transporter superfamily
BB784_01245	COG1215	transferase activity, transferring glycosyl groups
BB784_01250	COG0457	Tetratricopeptide repeat
BB784_01265	COG2194	sulfuric ester hydrolase activity
BB784_01295	COG1215	transferase activity, transferring glycosyl groups
BB784_01300	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BB784_01305	COG0457	Tetratricopeptide repeat
BB784_01305	COG3118	belongs to the thioredoxin family
BB784_01315	COG2199	diguanylate cyclase activity
BB784_01315	COG2200	EAL domain
BB784_01325	COG0612	Peptidase, M16
BB784_01340	COG2982	Protein involved in outer membrane biogenesis
BB784_01345	COG0477	Major facilitator Superfamily
BB784_01350	COG1295	ribonuclease BN
BB784_01355	COG0583	DNA-binding transcription factor activity
BB784_01360	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_01365	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB784_01375	COG1454	alcohol dehydrogenase
BB784_01385	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BB784_01390	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BB784_01395	COG0671	phosphoesterase, PA-phosphatase related
BB784_01415	COG0589	response to stress
BB784_01425	COG0306	phosphate transporter
BB784_01430	COG2081	HI0933 family
BB784_01435	COG2239	Acts as a magnesium transporter
BB784_01445	COG1124	(ABC) transporter
BB784_01455	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB784_01460	COG0601	transmembrane transport
BB784_01465	COG0747	negative chemotaxis
BB784_01475	COG3479	Phenolic acid decarboxylase
BB784_01515	COG0628	permease
BB784_01520	COG0477	Major facilitator Superfamily
BB784_01530	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BB784_01545	COG3714	YhhN family
BB784_01555	COG3776	membrane
BB784_01560	COG0742	ribosomal rna small subunit methyltransferase
BB784_01565	COG0552	protein localization to endoplasmic reticulum
BB784_01570	COG2884	Cell division ATP-binding protein ftsE
BB784_01575	COG2177	Part of the ABC transporter FtsEX involved in
BB784_01590	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BB784_01600	COG0683	leucine binding
BB784_01620	COG0683	leucine binding
BB784_01625	COG0559	Belongs to the binding-protein-dependent transport system permease family
BB784_01635	COG0411	ABC transporter
BB784_01640	COG0410	ABC transporter
BB784_01655	COG1653	transport
BB784_01675	COG0584	glycerophosphoryl diester phosphodiesterase
BB784_01685	COG0405	Gamma-glutamyltransferase
BB784_01690	COG1247	-acetyltransferase
BB784_01705	COG0673	inositol 2-dehydrogenase activity
BB784_01710	COG1741	Belongs to the pirin family
BB784_01715	COG1609	Transcriptional regulator
BB784_01720	COG3265	gluconokinase activity
BB784_01725	COG2610	gluconate transmembrane transporter activity
BB784_01735	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BB784_01760	COG0058	SHG alpha-glucan phosphorylase activity
BB784_01775	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BB784_01790	COG1349	DNA-binding transcription factor activity
BB784_01805	COG0058	SHG alpha-glucan phosphorylase activity
BB784_01810	COG1640	4-alpha-glucanotransferase
BB784_01815	COG2610	gluconate transmembrane transporter activity
BB784_01825	COG1040	competence protein
BB784_01850	COG1918	ferrous iron import across plasma membrane
BB784_01855	COG2183	response to ionizing radiation
BB784_01860	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BB784_01865	COG0745	RESPONSE REGULATOR receiver
BB784_01890	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BB784_01895	COG1011	Hydrolase
BB784_01905	COG0494	nUDIX hydrolase
BB784_01910	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BB784_01935	COG4796	Type ii and iii secretion system protein
BB784_01955	COG3266	domain, Protein
BB784_01960	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BB784_01965	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BB784_01985	COG2146	nitrite reductase [NAD(P)H] activity
BB784_01990	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BB784_02000	COG0402	S-adenosylhomocysteine deaminase activity
BB784_02005	COG0738	Major facilitator superfamily
BB784_02030	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BB784_02035	COG1289	transmembrane transporter activity
BB784_02050	COG1765	OsmC-like protein
BB784_02055	COG3954	Phosphoribulokinase
BB784_02065	COG0429	hydrolase of the alpha beta-hydrolase fold
BB784_02075	COG0488	(ABC) transporter
BB784_02090	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
BB784_02095	COG1047	Peptidyl-prolyl cis-trans
BB784_02105	COG0545	Peptidyl-prolyl cis-trans isomerase
BB784_02110	COG2964	Protein conserved in bacteria
BB784_02150	COG2906	2 iron, 2 sulfur cluster binding
BB784_02165	COG0051	transcription antitermination factor activity, RNA binding
BB784_02200	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BB784_02205	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BB784_02270	COG0201	protein transport
BB784_02295	COG0202	RNA polymerase activity
BB784_02310	COG0789	Transcriptional regulator
BB784_02315	COG3036	rescue of stalled ribosome
BB784_02325	COG0569	domain protein
BB784_02345	COG0758	DNA mediated transformation
BB784_02355	COG0551	DNA topoisomerase type I activity
BB784_02375	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BB784_02410	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB784_02415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_02420	COG1309	transcriptional regulator
BB784_02445	COG4145	pantothenate transmembrane transporter activity
BB784_02450	COG3924	membrane
BB784_02455	COG0439	Biotin carboxylase
BB784_02460	COG0511	ligase activity, forming carbon-carbon bonds
BB784_02480	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BB784_02490	COG2200	EAL domain
BB784_02490	COG2199	diguanylate cyclase activity
BB784_02500	COG1077	Cell shape determining protein MreB Mrl
BB784_02505	COG1792	Involved in formation and maintenance of cell shape
BB784_02510	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BB784_02520	COG1530	ribonuclease E activity
BB784_02525	COG3164	Protein of unknown function
BB784_02530	COG0312	modulator of DNA gyrase
BB784_02535	COG0583	DNA-binding transcription factor activity
BB784_02550	COG1289	transmembrane transporter activity
BB784_02555	COG2732	(Barnase) inhibitor
BB784_02590	COG0471	metal ion transport
BB784_02595	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BB784_02625	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BB784_02630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BB784_02635	COG3105	Protein conserved in bacteria
BB784_02640	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BB784_02660	COG0625	glutathione transferase activity
BB784_02665	COG2969	positive regulation of protein catabolic process
BB784_02675	COG0493	'glutamate synthase
BB784_02680	COG0070	glutamate synthase
BB784_02680	COG0069	glutamate synthase activity
BB784_02680	COG0067	glutamate synthase
BB784_02690	COG1242	4 iron, 4 sulfur cluster binding
BB784_02695	COG2271	Major facilitator Superfamily
BB784_02700	COG1063	alcohol dehydrogenase
BB784_02710	COG1312	Catalyzes the dehydration of D-mannonate
BB784_02715	COG2198	Histidine kinase
BB784_02715	COG5002	protein histidine kinase activity
BB784_02715	COG0784	Response regulator, receiver
BB784_02720	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BB784_02725	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BB784_02730	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_02740	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_02745	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BB784_02750	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BB784_02755	COG1137	ATPase activity
BB784_02760	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BB784_02765	COG3117	lipopolysaccharide transmembrane transporter activity
BB784_02770	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BB784_02780	COG0530	calcium, potassium:sodium antiporter activity
BB784_02785	COG1127	ABC transporter
BB784_02790	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BB784_02795	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BB784_02800	COG2854	intermembrane phospholipid transfer
BB784_02805	COG3113	response to antibiotic
BB784_02810	COG5007	Belongs to the BolA IbaG family
BB784_02820	COG3423	Transcriptional regulator
BB784_02825	COG0142	geranyltranstransferase activity
BB784_02840	COG0697	spore germination
BB784_02850	COG2027	D-alanyl-D-alanine carboxypeptidase
BB784_02855	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BB784_02860	COG1534	Rna-binding protein
BB784_02875	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BB784_02880	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BB784_02890	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BB784_02935	COG0195	Participates in both transcription termination and antitermination
BB784_02980	COG0814	amino acid
BB784_02985	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB784_03005	COG3153	acetyltransferase
BB784_03020	COG0693	protein deglycase activity
BB784_03025	COG0702	epimerase
BB784_03030	COG0701	Predicted permease
BB784_03035	COG2823	Periplasmic or secreted lipoprotein
BB784_03055	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BB784_03070	COG2271	Major facilitator Superfamily
BB784_03080	COG2084	Dehydrogenase
BB784_03085	COG1929	Belongs to the glycerate kinase type-1 family
BB784_03115	COG1741	Belongs to the pirin family
BB784_03120	COG0583	DNA-binding transcription factor activity
BB784_03125	COG3152	Membrane
BB784_03130	COG0435	Glutathione S-transferase
BB784_03135	COG2259	Doxx family
BB784_03145	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
BB784_03150	COG4575	ribosome binding
BB784_03155	COG1422	Protein of unknown function (DUF1090)
BB784_03165	COG0586	Pfam SNARE associated Golgi protein
BB784_03170	COG2186	Transcriptional regulator
BB784_03175	COG2271	Major facilitator Superfamily
BB784_03185	COG2721	sulfolactate sulfo-lyase activity
BB784_03200	COG0861	Integral membrane protein TerC family
BB784_03205	COG0673	inositol 2-dehydrogenase activity
BB784_03210	COG1451	nucleotide metabolic process
BB784_03230	COG1902	pentaerythritol trinitrate reductase activity
BB784_03230	COG0446	pyridine nucleotide-disulphide oxidoreductase
BB784_03285	COG1695	Transcriptional regulator
BB784_03295	COG2375	cellular response to nickel ion
BB784_03310	COG1461	Dihydroxyacetone kinase
BB784_03315	COG2376	Dihydroxyacetone kinase
BB784_03390	COG3247	response to pH
BB784_03400	COG2205	protein histidine kinase activity
BB784_03400	COG2198	Histidine kinase
BB784_03400	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_03400	COG0784	Response regulator, receiver
BB784_03405	COG2197	response regulator
BB784_03425	COG4974	Belongs to the 'phage' integrase family
BB784_03460	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BB784_03505	COG4695	Portal protein
BB784_03665	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BB784_03670	COG0358	DNA primase activity
BB784_03745	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BB784_03760	COG4991	sh3 domain protein
BB784_03765	COG3025	triphosphatase activity
BB784_03790	COG2960	long-chain fatty acid transporting porin activity
BB784_03805	COG3384	dioxygenase
BB784_03810	COG0754	glutathionylspermidine amidase activity
BB784_03825	COG0494	nUDIX hydrolase
BB784_03830	COG3151	Protein conserved in bacteria
BB784_03835	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BB784_03840	COG3150	esterase
BB784_03845	COG0187	DNA topoisomerase II activity
BB784_03850	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BB784_03855	COG2249	NAD(P)H dehydrogenase (quinone) activity
BB784_03860	COG0642	Histidine kinase
BB784_03865	COG0745	RESPONSE REGULATOR receiver
BB784_03870	COG3111	PFAM Bacterial OB fold (BOF) protein
BB784_03875	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BB784_03880	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BB784_03885	COG0204	Acyl-transferase
BB784_03890	COG2132	Multicopper oxidase
BB784_03905	COG0656	L-ascorbic acid biosynthetic process
BB784_03910	COG1979	alcohol dehydrogenase
BB784_03915	COG2207	Transcriptional regulator
BB784_03920	COG0586	Pfam SNARE associated Golgi protein
BB784_03925	COG0626	cystathionine gamma-synthase activity
BB784_03935	COG0811	peptide transport
BB784_03940	COG0848	biopolymer transport protein
BB784_03945	COG2211	Major facilitator Superfamily
BB784_03970	COG0625	glutathione transferase activity
BB784_03985	COG0754	glutathionylspermidine amidase activity
BB784_03990	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB784_04010	COG0583	DNA-binding transcription factor activity
BB784_04015	COG0626	cystathionine gamma-synthase activity
BB784_04030	COG1811	Na channel or pump
BB784_04040	COG1982	Orn Lys Arg decarboxylase major
BB784_04045	COG2211	Major facilitator Superfamily
BB784_04060	COG1194	a g-specific adenine glycosylase
BB784_04070	COG3171	Protein conserved in bacteria
BB784_04080	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BB784_04095	COG0762	integral membrane protein
BB784_04100	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BB784_04105	COG2805	Type II/IV secretion system protein
BB784_04130	COG0189	ligase activity
BB784_04135	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BB784_04140	COG2356	endonuclease I
BB784_04150	COG2814	Major facilitator Superfamily
BB784_04185	COG2146	nitrite reductase [NAD(P)H] activity
BB784_04200	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_04205	COG1414	Transcriptional regulator
BB784_04235	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_04240	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
BB784_04260	COG0501	Belongs to the peptidase M48B family
BB784_04265	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BB784_04280	COG0191	fructose-bisphosphate aldolase activity
BB784_04285	COG0668	transmembrane transport
BB784_04300	COG2968	Membrane
BB784_04320	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BB784_04325	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BB784_04345	COG0006	proline dipeptidase activity
BB784_04350	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BB784_04355	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BB784_04375	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_04380	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BB784_04400	COG2723	6-phospho-beta-galactosidase activity
BB784_04405	COG1737	Transcriptional regulator
BB784_04415	COG1272	protein, Hemolysin III
BB784_04425	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BB784_04435	COG0716	FMN binding
BB784_04440	COG4974	Belongs to the 'phage' integrase family
BB784_04450	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BB784_04475	COG4942	peptidase
BB784_04485	COG2814	Major facilitator Superfamily
BB784_04500	COG0667	Aldo Keto reductase
BB784_04540	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BB784_04545	COG1393	Belongs to the ArsC family
BB784_04550	COG3104	oligopeptide transport
BB784_04560	COG1538	Outer membrane efflux protein
BB784_04565	COG1289	transmembrane transporter activity
BB784_04580	COG3592	Divergent 4Fe-4S mono-cluster
BB784_04585	COG2388	GCN5-related N-acetyl-transferase
BB784_04595	COG3539	Fimbrial protein
BB784_04600	COG3539	Fimbrial protein
BB784_04605	COG3539	Fimbrial protein
BB784_04610	COG3188	usher protein
BB784_04615	COG3121	Chaperone
BB784_04620	COG3539	Fimbrial protein
BB784_04635	COG4974	Belongs to the 'phage' integrase family
BB784_04640	COG0582	viral genome integration into host DNA
BB784_04655	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BB784_04660	COG1846	Transcriptional regulator
BB784_04665	COG0697	spore germination
BB784_04715	COG0667	Aldo Keto reductase
BB784_04720	COG0814	amino acid
BB784_04735	COG0183	Belongs to the thiolase family
BB784_04740	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BB784_04745	COG0823	Involved in the tonB-independent uptake of proteins
BB784_04755	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_04760	COG2814	Major facilitator Superfamily
BB784_04795	COG3842	ATPase activity
BB784_04800	COG0395	ABC-type sugar transport system, permease component
BB784_04805	COG1175	transmembrane transport
BB784_04810	COG1917	Cupin 2, conserved barrel domain protein
BB784_04815	COG1794	racemase activity, acting on amino acids and derivatives
BB784_04820	COG0583	DNA-binding transcription factor activity
BB784_04825	COG0019	diaminopimelate decarboxylase activity
BB784_04830	COG1609	Transcriptional regulator
BB784_04835	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_04840	COG2723	6-phospho-beta-galactosidase activity
BB784_04845	COG2186	Transcriptional regulator
BB784_04855	COG1609	Transcriptional regulator
BB784_04880	COG0667	Aldo Keto reductase
BB784_04890	COG0861	Integral membrane protein TerC family
BB784_04925	COG2165	general secretion pathway protein
BB784_04930	COG4795	General secretion pathway protein
BB784_04940	COG4967	type IV pilus modification protein PilV
BB784_04945	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BB784_04950	COG1025	Belongs to the peptidase M16 family
BB784_04960	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BB784_04970	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BB784_04970	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BB784_04975	COG0860	N-Acetylmuramoyl-L-alanine amidase
BB784_04980	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BB784_05000	COG4810	utilization protein
BB784_05010	COG4656	Part of a membrane complex involved in electron transport
BB784_05015	COG1454	alcohol dehydrogenase
BB784_05015	COG1012	belongs to the aldehyde dehydrogenase family
BB784_05050	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BB784_05085	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BB784_05120	COG2241	protein methyltransferase activity
BB784_05130	COG2875	Belongs to the precorrin methyltransferase family
BB784_05210	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BB784_05215	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BB784_05220	COG2166	iron-sulfur cluster assembly
BB784_05225	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BB784_05235	COG0583	DNA-binding transcription factor activity
BB784_05240	COG2363	Small membrane protein
BB784_05250	COG1349	DNA-binding transcription factor activity
BB784_05270	COG0738	Major facilitator superfamily
BB784_05280	COG0235	Class ii aldolase
BB784_05285	COG1454	alcohol dehydrogenase
BB784_05305	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB784_05320	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BB784_05325	COG2011	ABC-type metal ion transport system permease component
BB784_05330	COG1464	Belongs to the NlpA lipoprotein family
BB784_05340	COG0477	Major facilitator Superfamily
BB784_05350	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BB784_05355	COG1760	l-serine dehydratase
BB784_05360	COG0814	amino acid
BB784_05365	COG1611	Belongs to the LOG family
BB784_05380	COG3098	single-species biofilm formation
BB784_05385	COG0564	pseudouridine synthase activity
BB784_05390	COG0716	FMN binding
BB784_05395	COG2271	Major facilitator Superfamily
BB784_05400	COG4948	Mandelate Racemase Muconate Lactonizing
BB784_05405	COG4948	Mandelate Racemase Muconate Lactonizing
BB784_05410	COG1929	Belongs to the glycerate kinase type-1 family
BB784_05415	COG4999	Histidine kinase
BB784_05415	COG3437	response regulator, receiver
BB784_05415	COG3850	Histidine kinase
BB784_05415	COG2205	protein histidine kinase activity
BB784_05425	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BB784_05430	COG3956	TIGRFAM MazG family protein
BB784_05455	COG0602	queuosine metabolic process
BB784_05460	COG0720	synthase
BB784_05485	COG1203	CRISPR-associated helicase, Cas3
BB784_05500	COG1857	crispr-associated protein
BB784_05515	COG1518	maintenance of DNA repeat elements
BB784_05520	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB784_05535	COG2234	aminopeptidase activity
BB784_05595	COG4942	peptidase
BB784_05595	COG1388	LysM domain
BB784_05600	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BB784_05625	COG0163	prenyltransferase activity
BB784_05630	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BB784_05670	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_05675	COG4558	Periplasmic binding protein
BB784_05680	COG3720	iron ion transport
BB784_05700	COG0679	Auxin Efflux Carrier
BB784_05715	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB784_05720	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB784_05725	COG1121	(ABC) transporter
BB784_05730	COG0803	Belongs to the bacterial solute-binding protein 9 family
BB784_05735	COG1609	Transcriptional regulator
BB784_05740	COG1940	carbohydrate kinase activity
BB784_05745	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB784_05750	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_05755	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_05760	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_05765	COG4580	involved in the transport of maltose and maltodextrins
BB784_05775	COG2723	6-phospho-beta-galactosidase activity
BB784_05785	COG0309	Hydrogenase expression formation protein (HypE)
BB784_05790	COG0409	Hydrogenase expression formation protein
BB784_05795	COG0298	carbon dioxide binding
BB784_05800	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BB784_05820	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB784_05825	COG0651	ATP synthesis coupled electron transport
BB784_05830	COG0650	Formate hydrogenlyase subunit 4
BB784_05835	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
BB784_05835	COG3261	NADH dehydrogenase
BB784_05840	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BB784_05845	COG3260	NADH ubiquinone oxidoreductase 20
BB784_05855	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BB784_05865	COG2723	6-phospho-beta-galactosidase activity
BB784_05870	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_05870	COG1263	PTS System
BB784_05880	COG1609	Transcriptional regulator
BB784_05885	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB784_05890	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BB784_05895	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
BB784_05925	COG1349	DNA-binding transcription factor activity
BB784_05930	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_05935	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_05945	COG3732	PTS system glucitol sorbitol-specific
BB784_05950	COG3730	PTS system glucitol sorbitol-specific
BB784_05955	COG2951	lytic endotransglycosylase activity
BB784_05960	COG1121	(ABC) transporter
BB784_05965	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB784_05970	COG0803	Belongs to the bacterial solute-binding protein 9 family
BB784_05975	COG1546	Belongs to the CinA family
BB784_06035	COG2823	Periplasmic or secreted lipoprotein
BB784_06040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB784_06045	COG1238	metal cluster binding
BB784_06065	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BB784_06070	COG2814	Major facilitator Superfamily
BB784_06075	COG1566	PFAM secretion protein HlyD family protein
BB784_06085	COG1846	Transcriptional regulator
BB784_06100	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BB784_06110	COG4176	ABC-type proline glycine betaine transport system permease component
BB784_06125	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BB784_06135	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BB784_06140	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB784_06145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB784_06150	COG4575	ribosome binding
BB784_06170	COG2916	Histone family protein nucleoid-structuring protein H-NS
BB784_06185	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BB784_06190	COG0640	Transcriptional regulator
BB784_06200	COG0583	DNA-binding transcription factor activity
BB784_06205	COG3284	Transcriptional regulator
BB784_06210	COG1012	belongs to the aldehyde dehydrogenase family
BB784_06215	COG3539	Fimbrial protein
BB784_06220	COG3121	Chaperone
BB784_06235	COG3121	Chaperone
BB784_06255	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_06265	COG0235	Class ii aldolase
BB784_06270	COG1126	abc transporter atp-binding protein
BB784_06275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_06310	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_06315	COG2207	Transcriptional regulator
BB784_06315	COG3708	Transcriptional regulator
BB784_06345	COG2867	negative regulation of translational initiation
BB784_06365	COG0497	DNA recombination
BB784_06385	COG4536	flavin adenine dinucleotide binding
BB784_06390	COG4137	Cytochrome C assembly protein
BB784_06395	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BB784_06435	COG2885	chlorophyll binding
BB784_06440	COG2199	diguanylate cyclase activity
BB784_06450	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BB784_06455	COG1605	Chorismate mutase
BB784_06455	COG0287	Prephenate dehydrogenase
BB784_06465	COG0077	Prephenate dehydratase
BB784_06465	COG1605	Chorismate mutase
BB784_06470	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BB784_06475	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BB784_06480	COG0564	pseudouridine synthase activity
BB784_06490	COG0542	response to heat
BB784_06520	COG0477	Major facilitator Superfamily
BB784_06525	COG5544	Lipoprotein
BB784_06530	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BB784_06545	COG3118	belongs to the thioredoxin family
BB784_06550	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BB784_06565	COG0513	Belongs to the DEAD box helicase family
BB784_06575	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BB784_06585	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
BB784_06590	COG3026	antisigma factor binding
BB784_06595	COG3086	response to oxidative stress
BB784_06605	COG0681	Belongs to the peptidase S26 family
BB784_06630	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BB784_06640	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB784_06645	COG1737	Transcriptional regulator
BB784_06650	COG0560	Phosphoserine phosphatase
BB784_06655	COG0590	tRNA wobble adenosine to inosine editing
BB784_06665	COG0047	phosphoribosylformylglycinamidine synthase activity
BB784_06665	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BB784_06670	COG2205	protein histidine kinase activity
BB784_06675	COG3170	Tfp pilus assembly protein FimV
BB784_06680	COG2204	response regulator
BB784_06685	COG0347	Belongs to the P(II) protein family
BB784_06690	COG1017	nitric oxide dioxygenase activity
BB784_06690	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB784_06705	COG2259	Doxx family
BB784_06710	COG1940	carbohydrate kinase activity
BB784_06715	COG0457	Tetratricopeptide repeat
BB784_06720	COG0477	Major facilitator Superfamily
BB784_06720	COG2814	Major facilitator Superfamily
BB784_06725	COG2017	converts alpha-aldose to the beta-anomer
BB784_06730	COG2814	Major facilitator Superfamily
BB784_06735	COG3711	transcriptional antiterminator
BB784_06740	COG3683	transport system, periplasmic component
BB784_06745	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BB784_06775	COG0822	iron-sulfur transferase activity
BB784_06795	COG0633	Ferredoxin
BB784_06800	COG2975	iron-sulfur cluster assembly
BB784_06820	COG2897	thiosulfate sulfurtransferase activity
BB784_06825	COG2373	Large extracellular alpha-helical protein
BB784_06830	COG4953	penicillin-binding protein 1C
BB784_06860	COG2976	Protein conserved in bacteria
BB784_06880	COG1645	bacterial-type flagellum-dependent swarming motility
BB784_06890	COG0516	GMP reductase activity
BB784_06890	COG0517	IMP dehydrogenase activity
BB784_06905	COG0641	radical SAM
BB784_06925	COG2200	EAL domain
BB784_06930	COG0248	Ppx GppA phosphatase
BB784_06940	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BB784_06955	COG2723	6-phospho-beta-galactosidase activity
BB784_06965	COG2233	PERMEase
BB784_06980	COG1393	Belongs to the ArsC family
BB784_06985	COG4783	chaperone-mediated protein folding
BB784_06995	COG0628	permease
BB784_07000	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BB784_07005	COG2716	regulation of RNA biosynthetic process
BB784_07015	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BB784_07030	COG2321	neutral zinc metallopeptidase
BB784_07035	COG1444	tRNA N-acetyltransferase activity
BB784_07040	COG0400	carboxylic ester hydrolase activity
BB784_07055	COG1393	Belongs to the ArsC family
BB784_07060	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB784_07070	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB784_07070	COG0493	'glutamate synthase
BB784_07080	COG5342	invasion associated locus B
BB784_07085	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BB784_07090	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BB784_07100	COG4810	utilization protein
BB784_07105	COG4917	ethanolamine utilization protein
BB784_07140	COG4820	ethanolamine utilization protein (EutJ)
BB784_07170	COG4816	utilization protein
BB784_07190	COG0860	N-Acetylmuramoyl-L-alanine amidase
BB784_07210	COG2837	iron assimilation
BB784_07225	COG4150	thiosulfate binding
BB784_07230	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BB784_07235	COG4208	sulfate ABC transporter
BB784_07240	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BB784_07250	COG4319	ketosteroid isomerase
BB784_07270	COG2190	(PTS) system
BB784_07290	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BB784_07315	COG3530	Putative quorum-sensing-regulated virulence factor
BB784_07320	COG0385	Bile acid
BB784_07325	COG0583	DNA-binding transcription factor activity
BB784_07355	COG3415	Transposase
BB784_07360	COG3415	Transposase
BB784_07375	COG2199	diguanylate cyclase activity
BB784_07375	COG2200	EAL domain
BB784_07380	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BB784_07395	COG0667	Aldo Keto reductase
BB784_07400	COG3961	Belongs to the TPP enzyme family
BB784_07415	COG3279	Response regulator of the LytR AlgR family
BB784_07420	COG3275	phosphorelay sensor kinase activity
BB784_07435	COG0436	Aminotransferase
BB784_07440	COG2807	transmembrane transport
BB784_07445	COG0590	tRNA wobble adenosine to inosine editing
BB784_07450	COG0583	DNA-binding transcription factor activity
BB784_07485	COG2814	Major facilitator Superfamily
BB784_07490	COG4221	oxidoreductase activity
BB784_07495	COG2171	N-acyltransferase activity
BB784_07565	COG1122	ATPase activity
BB784_07605	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_07605	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_07610	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_07610	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_07615	COG3715	PTS system
BB784_07620	COG3716	PTS system mannose fructose sorbose family IID component
BB784_07635	COG2376	Dihydroxyacetone kinase
BB784_07640	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BB784_07645	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BB784_07665	COG2801	Transposase and inactivated derivatives
BB784_07690	COG3121	Chaperone
BB784_07695	COG3188	usher protein
BB784_07715	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BB784_07740	COG2116	formate transmembrane transporter activity
BB784_07745	COG2853	Lipoprotein
BB784_07755	COG3691	Protein conserved in bacteria
BB784_07770	COG2062	phosphohistidine phosphatase, SixA
BB784_07780	COG2890	protein-(glutamine-N5) methyltransferase activity
BB784_07795	COG0730	response to heat
BB784_07800	COG3101	peptidyl-lysine hydroxylation
BB784_07815	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BB784_07835	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BB784_07845	COG0586	Pfam SNARE associated Golgi protein
BB784_07855	COG0285	dihydrofolate synthase activity
BB784_07860	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BB784_07865	COG1286	toxin biosynthetic process
BB784_07870	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BB784_07875	COG3829	transcription factor binding
BB784_07885	COG0531	amino acid
BB784_07890	COG3457	Alanine racemase
BB784_07895	COG0833	amino acid
BB784_07900	COG0163	prenyltransferase activity
BB784_07910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_07920	COG4215	(ABC) transporter
BB784_07925	COG4160	amino acid transport
BB784_07930	COG4598	ABC transporter
BB784_07945	COG1090	epimerase
BB784_07950	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BB784_07955	COG0625	glutathione transferase activity
BB784_07960	COG0625	glutathione transferase activity
BB784_07965	COG0622	Phosphoesterase
BB784_07970	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BB784_07975	COG0857	belongs to the CobB CobQ family
BB784_07975	COG0280	phosphate acetyltransferase
BB784_07980	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BB784_07995	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB784_08000	COG0471	metal ion transport
BB784_08000	COG0490	domain, Protein
BB784_08010	COG0436	Aminotransferase
BB784_08015	COG0583	DNA-binding transcription factor activity
BB784_08040	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BB784_08050	COG1034	ATP synthesis coupled electron transport
BB784_08065	COG0839	Belongs to the complex I subunit 6 family
BB784_08075	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BB784_08080	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BB784_08095	COG2153	protein acetylation
BB784_08100	COG1169	isochorismate synthase
BB784_08125	COG0318	PFAM AMP-dependent synthetase and ligase
BB784_08135	COG5464	transposase or invertase
BB784_08155	COG1414	Transcriptional regulator
BB784_08165	COG2271	Major facilitator Superfamily
BB784_08175	COG0247	lactate metabolic process
BB784_08185	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BB784_08190	COG2271	Major facilitator Superfamily
BB784_08195	COG0584	glycerophosphoryl diester phosphodiesterase
BB784_08205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB784_08230	COG2205	protein histidine kinase activity
BB784_08230	COG0784	Response regulator, receiver
BB784_08240	COG2198	Histidine kinase
BB784_08240	COG0642	Histidine kinase
BB784_08260	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BB784_08260	COG2169	Transcriptional regulator
BB784_08265	COG3145	DNA-N1-methyladenine dioxygenase activity
BB784_08270	COG4615	Cyclic peptide transporter
BB784_08275	COG2239	Acts as a magnesium transporter
BB784_08280	COG0659	secondary active sulfate transmembrane transporter activity
BB784_08295	COG0628	permease
BB784_08320	COG1349	DNA-binding transcription factor activity
BB784_08325	COG0494	nUDIX hydrolase
BB784_08345	COG1061	Type III restriction enzyme res subunit
BB784_08350	COG1187	pseudouridine synthase activity
BB784_08355	COG2814	Major facilitator Superfamily
BB784_08365	COG4172	Belongs to the ABC transporter superfamily
BB784_08370	COG4239	(ABC) transporter, permease
BB784_08375	COG4174	ABC transporter (Permease)
BB784_08380	COG4166	transmembrane transport
BB784_08385	COG2200	EAL domain
BB784_08390	COG0791	NLP P60 protein
BB784_08395	COG0671	phosphoesterase, PA-phosphatase related
BB784_08400	COG0523	cobalamin synthesis protein
BB784_08405	COG0246	Mannitol dehydrogenase
BB784_08410	COG1312	Catalyzes the dehydration of D-mannonate
BB784_08445	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_08445	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_08450	COG1105	Belongs to the carbohydrate kinase PfkB family
BB784_08455	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB784_08455	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB784_08455	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BB784_08465	COG2855	membrane
BB784_08475	COG0583	DNA-binding transcription factor activity
BB784_08480	COG0833	amino acid
BB784_08490	COG4771	TonB-dependent receptor
BB784_08505	COG2311	Membrane
BB784_08520	COG1129	ABC transporter
BB784_08530	COG2949	membrane
BB784_08540	COG1346	cytolysis
BB784_08550	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BB784_08555	COG3659	wide pore channel activity
BB784_08570	COG2723	6-phospho-beta-galactosidase activity
BB784_08580	COG1538	Outer membrane efflux protein
BB784_08585	COG0586	Pfam SNARE associated Golgi protein
BB784_08595	COG1686	Belongs to the peptidase S11 family
BB784_08605	COG0277	FAD linked oxidase domain protein
BB784_08610	COG1472	Belongs to the glycosyl hydrolase 3 family
BB784_08615	COG1732	Glycine betaine
BB784_08620	COG1174	glycine betaine transport
BB784_08625	COG1125	glycine betaine transport
BB784_08630	COG1174	glycine betaine transport
BB784_08640	COG3275	phosphorelay sensor kinase activity
BB784_08650	COG4807	Protein conserved in bacteria
BB784_08670	COG5455	response to cobalt ion
BB784_08675	COG0583	DNA-binding transcription factor activity
BB784_08680	COG2252	PERMEase
BB784_08690	COG0583	DNA-binding transcription factor activity
BB784_08710	COG0351	phosphomethylpyrimidine kinase
BB784_08715	COG1830	Aldolase
BB784_08750	COG1070	Carbohydrate kinase
BB784_08760	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB784_08765	COG4948	Mandelate Racemase Muconate Lactonizing
BB784_08770	COG0747	negative chemotaxis
BB784_08775	COG0601	transmembrane transport
BB784_08785	COG0444	Belongs to the ABC transporter superfamily
BB784_08790	COG4608	Belongs to the ABC transporter superfamily
BB784_08805	COG0745	RESPONSE REGULATOR receiver
BB784_08810	COG2205	protein histidine kinase activity
BB784_08835	COG1301	dicarboxylic acid transport
BB784_08855	COG5002	protein histidine kinase activity
BB784_08860	COG0443	Heat shock 70 kDa protein
BB784_08865	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BB784_08880	COG2982	Protein involved in outer membrane biogenesis
BB784_08885	COG1253	flavin adenine dinucleotide binding
BB784_08945	COG1216	Glycosyl transferase, family 2
BB784_08945	COG1442	glycosyl transferase family 8
BB784_08955	COG0438	transferase activity, transferring glycosyl groups
BB784_08985	COG1088	dTDP-glucose 4,6-dehydratase activity
BB784_09065	COG0438	transferase activity, transferring glycosyl groups
BB784_09070	COG1215	transferase activity, transferring glycosyl groups
BB784_09090	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BB784_09115	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BB784_09120	COG0583	DNA-binding transcription factor activity
BB784_09125	COG0531	amino acid
BB784_09130	COG0640	Transcriptional regulator
BB784_09135	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BB784_09140	COG2925	Exonuclease
BB784_09155	COG1289	transmembrane transporter activity
BB784_09175	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BB784_09185	COG1942	4-Oxalocrotonate Tautomerase
BB784_09190	COG0583	DNA-binding transcription factor activity
BB784_09195	COG0095	Lipoate-protein ligase
BB784_09200	COG0477	Major facilitator Superfamily
BB784_09215	COG5001	Diguanylate cyclase
BB784_09215	COG3300	MHYT domain
BB784_09225	COG3615	Tellurite resistance protein tehB
BB784_09250	COG3706	GGDEF domain
BB784_09270	COG0534	Mate efflux family protein
BB784_09280	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BB784_09300	COG0604	alcohol dehydrogenase
BB784_09305	COG1309	transcriptional regulator
BB784_09310	COG0025	NhaP-type Na H and K H
BB784_09405	COG3504	Conjugal transfer protein
BB784_09485	COG4771	TonB-dependent receptor
BB784_09490	COG1021	2,3-dihydroxybenzoate-AMP ligase
BB784_09510	COG3433	isochorismatase activity
BB784_09510	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BB784_09510	COG2226	methyltransferase
BB784_09525	COG1132	(ABC) transporter
BB784_09530	COG2814	Major facilitator Superfamily
BB784_09535	COG1169	isochorismate synthase
BB784_09540	COG0582	viral genome integration into host DNA
BB784_09650	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
BB784_09655	COG1403	HNH endonuclease
BB784_09675	COG3772	lysozyme
BB784_09715	COG4626	Terminase
BB784_09715	COG1802	Transcriptional regulator
BB784_09720	COG4695	Portal protein
BB784_09725	COG0740	serine-type endopeptidase activity
BB784_09775	COG1484	DNA-dependent DNA replication
BB784_09780	COG4584	PFAM Integrase catalytic
BB784_09815	COG3316	Transposase and inactivated derivatives
BB784_09855	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BB784_09865	COG1418	mRNA catabolic process
BB784_09870	COG0270	DNA (cytosine-5-)-methyltransferase activity
BB784_09875	COG3727	T/G mismatch-specific endonuclease activity
BB784_09880	COG0697	spore germination
BB784_09885	COG2354	Protein conserved in bacteria
BB784_09915	COG0366	Alpha amylase catalytic
BB784_09940	COG2197	response regulator
BB784_09950	COG2197	response regulator
BB784_09960	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BB784_09985	COG3318	Belongs to the UPF0149 family
BB784_09985	COG3012	SEC-C Motif Domain Protein
BB784_09990	COG0814	amino acid
BB784_10000	COG1528	Iron-storage protein
BB784_10015	COG0477	Major facilitator Superfamily
BB784_10025	COG2211	Major facilitator Superfamily
BB784_10035	COG1528	Iron-storage protein
BB784_10045	COG1879	ABC-type sugar transport system periplasmic component
BB784_10055	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_10080	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BB784_10090	COG3102	Protein conserved in bacteria
BB784_10110	COG3788	relative of glutathione S-transferase, MAPEG superfamily
BB784_10115	COG1801	Protein of unknown function DUF72
BB784_10120	COG1335	isochorismatase
BB784_10130	COG0494	nUDIX hydrolase
BB784_10155	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB784_10165	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BB784_10170	COG0739	heme binding
BB784_10175	COG1560	Kdo2-lipid A biosynthetic process
BB784_10185	COG1737	Transcriptional regulator
BB784_10200	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BB784_10205	COG0129	dihydroxy-acid dehydratase activity
BB784_10210	COG0800	Aldolase
BB784_10220	COG3141	response to X-ray
BB784_10225	COG2979	Protein of unknown function (DUF533)
BB784_10235	COG1770	oligopeptidase
BB784_10240	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB784_10250	COG2372	response to copper ion
BB784_10255	COG1276	copper resistance
BB784_10275	COG2990	Protein conserved in bacteria
BB784_10300	COG3008	intermembrane lipid transfer
BB784_10305	COG2995	paraquat-inducible protein a
BB784_10330	COG2814	Major facilitator Superfamily
BB784_10335	COG1414	Transcriptional regulator
BB784_10370	COG1278	Cold shock
BB784_10375	COG0768	penicillin binding
BB784_10380	COG2226	methyltransferase
BB784_10400	COG3716	PTS system mannose fructose sorbose family IID component
BB784_10405	COG3715	PTS system
BB784_10410	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_10410	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_10415	COG1253	flavin adenine dinucleotide binding
BB784_10420	COG2200	EAL domain
BB784_10430	COG1760	l-serine dehydratase
BB784_10450	COG0251	oxidation-reduction process
BB784_10455	COG1199	ATP-dependent helicase activity
BB784_10465	COG3065	identical protein binding
BB784_10470	COG0318	PFAM AMP-dependent synthetase and ligase
BB784_10475	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BB784_10485	COG2894	cell division
BB784_10505	COG0179	Fumarylacetoacetate (FAA) hydrolase
BB784_10535	COG2719	SpoVR family
BB784_10560	COG1619	proteins homologs of microcin C7 resistance protein MccF
BB784_10570	COG4774	siderophore transport
BB784_10585	COG2308	Evidence 4 Homologs of previously reported genes of
BB784_10630	COG0583	DNA-binding transcription factor activity
BB784_10635	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BB784_10650	COG1882	Formate acetyltransferase
BB784_10665	COG0559	Belongs to the binding-protein-dependent transport system permease family
BB784_10680	COG0410	ABC transporter
BB784_10685	COG0583	DNA-binding transcription factor activity
BB784_10715	COG0583	DNA-binding transcription factor activity
BB784_10730	COG3122	Protein conserved in bacteria
BB784_10760	COG2885	chlorophyll binding
BB784_10770	COG3501	Rhs element vgr protein
BB784_10825	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BB784_10930	COG0012	GTP binding
BB784_10950	COG0659	secondary active sulfate transmembrane transporter activity
BB784_10955	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BB784_10985	COG2890	protein-(glutamine-N5) methyltransferase activity
BB784_10990	COG3094	Invasion gene expression up-regulator, SirB
BB784_10995	COG2912	Transglutaminase-like superfamily
BB784_11005	COG0387	Pfam Sodium calcium exchanger
BB784_11010	COG4572	Cation transport regulator
BB784_11015	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BB784_11025	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BB784_11030	COG3707	response regulator
BB784_11040	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BB784_11050	COG1116	anion transmembrane transporter activity
BB784_11060	COG2146	nitrite reductase [NAD(P)H] activity
BB784_11060	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BB784_11065	COG0243	molybdopterin cofactor binding
BB784_11070	COG4932	domain protein
BB784_11075	COG2197	response regulator
BB784_11080	COG3850	Histidine kinase
BB784_11085	COG2223	nitrite transmembrane transporter activity
BB784_11095	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BB784_11100	COG1140	nitrate reductase beta subunit
BB784_11105	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BB784_11110	COG2181	nitrate reductase activity
BB784_11120	COG1522	sequence-specific DNA binding
BB784_11150	COG0788	formyltetrahydrofolate deformylase activity
BB784_11160	COG1752	Esterase of the alpha-beta hydrolase superfamily
BB784_11165	COG0745	RESPONSE REGULATOR receiver
BB784_11170	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BB784_11175	COG2916	Histone family protein nucleoid-structuring protein H-NS
BB784_11185	COG1435	thymidine kinase activity
BB784_11190	COG1454	alcohol dehydrogenase
BB784_11190	COG1012	belongs to the aldehyde dehydrogenase family
BB784_11200	COG2095	MarC family integral membrane protein
BB784_11210	COG4166	transmembrane transport
BB784_11215	COG0601	transmembrane transport
BB784_11220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB784_11225	COG0444	Belongs to the ABC transporter superfamily
BB784_11235	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BB784_11260	COG2353	YceI-like domain
BB784_11275	COG2350	Protein conserved in bacteria
BB784_11295	COG1105	Belongs to the carbohydrate kinase PfkB family
BB784_11300	COG3137	Salt-induced outer membrane protein
BB784_11340	COG0072	phenylalanine-tRNA ligase activity
BB784_11340	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BB784_11360	COG0583	DNA-binding transcription factor activity
BB784_11380	COG0386	Belongs to the glutathione peroxidase family
BB784_11390	COG0791	NLP P60 protein
BB784_11400	COG4256	Hemin uptake protein
BB784_11405	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BB784_11420	COG0574	Belongs to the PEP-utilizing enzyme family
BB784_11420	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BB784_11430	COG0628	permease
BB784_11440	COG0247	lactate metabolic process
BB784_11440	COG0277	FAD linked oxidase domain protein
BB784_11445	COG2050	protein possibly involved in aromatic compounds catabolism
BB784_11450	COG2261	transglycosylase associated protein
BB784_11480	COG1120	ATPase activity
BB784_11485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_11495	COG0583	DNA-binding transcription factor activity
BB784_11520	COG1304	FMN binding
BB784_11535	COG0316	Belongs to the HesB IscA family
BB784_11540	COG0719	Fe-S assembly protein
BB784_11545	COG0396	ATPase activity
BB784_11550	COG0719	Fe-S assembly protein
BB784_11565	COG1376	ErfK ybiS ycfS ynhG family protein
BB784_11595	COG1309	transcriptional regulator
BB784_11605	COG2271	Major facilitator Superfamily
BB784_11610	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BB784_11635	COG1414	Transcriptional regulator
BB784_11670	COG2814	Major facilitator Superfamily
BB784_11690	COG0583	DNA-binding transcription factor activity
BB784_11715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB784_11720	COG1116	anion transmembrane transporter activity
BB784_11725	COG4774	siderophore transport
BB784_11730	COG1120	ATPase activity
BB784_11735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_11740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_11765	COG0765	amino acid transport
BB784_11770	COG1126	abc transporter atp-binding protein
BB784_11785	COG2814	Major facilitator Superfamily
BB784_11800	COG1473	amidohydrolase
BB784_11805	COG3383	formate dehydrogenase (NAD+) activity
BB784_11810	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BB784_11820	COG1840	ABC-type Fe3 transport system, periplasmic component
BB784_11825	COG1175	transmembrane transport
BB784_11855	COG4133	protoheme IX ABC transporter activity
BB784_11860	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BB784_11865	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BB784_11880	COG1138	Cytochrome C-type biogenesis protein
BB784_11885	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BB784_11890	COG4235	cytochrome complex assembly
BB784_11890	COG3088	subunit of a heme lyase
BB784_11930	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BB784_11945	COG5002	protein histidine kinase activity
BB784_11945	COG3850	Histidine kinase
BB784_11950	COG0745	RESPONSE REGULATOR receiver
BB784_11970	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB784_12005	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_12010	COG2610	gluconate transmembrane transporter activity
BB784_12015	COG1250	3-hydroxyacyl-CoA dehydrogenase
BB784_12025	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BB784_12035	COG0583	DNA-binding transcription factor activity
BB784_12055	COG1733	regulation of RNA biosynthetic process
BB784_12065	COG2814	Major facilitator Superfamily
BB784_12080	COG0277	FAD linked oxidase domain protein
BB784_12085	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB784_12110	COG0402	S-adenosylhomocysteine deaminase activity
BB784_12125	COG0583	DNA-binding transcription factor activity
BB784_12185	COG4608	Belongs to the ABC transporter superfamily
BB784_12190	COG0444	Belongs to the ABC transporter superfamily
BB784_12215	COG0346	lactoylglutathione lyase activity
BB784_12220	COG1349	DNA-binding transcription factor activity
BB784_12260	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BB784_12320	COG0307	riboflavin synthase, alpha
BB784_12325	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BB784_12330	COG2814	Major facilitator Superfamily
BB784_12335	COG0583	DNA-binding transcription factor activity
BB784_12345	COG2814	Major facilitator Superfamily
BB784_12350	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BB784_12360	COG0582	viral genome integration into host DNA
BB784_12415	COG0791	NLP P60 protein
BB784_12420	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BB784_12430	COG0346	lactoylglutathione lyase activity
BB784_12435	COG1902	pentaerythritol trinitrate reductase activity
BB784_12440	COG1309	transcriptional regulator
BB784_12445	COG3313	Fe-S protein
BB784_12450	COG4989	oxidoreductase activity
BB784_12455	COG2032	superoxide dismutase activity
BB784_12460	COG1289	transmembrane transporter activity
BB784_12465	COG1566	PFAM secretion protein HlyD family protein
BB784_12480	COG3706	GGDEF domain
BB784_12485	COG3133	Outer membrane lipoprotein
BB784_12495	COG3895	Periplasmic Protein
BB784_12510	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BB784_12515	COG0625	glutathione transferase activity
BB784_12530	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BB784_12540	COG4659	FMN binding
BB784_12575	COG2723	6-phospho-beta-galactosidase activity
BB784_12585	COG0673	inositol 2-dehydrogenase activity
BB784_12595	COG2814	Major facilitator Superfamily
BB784_12600	COG1733	regulation of RNA biosynthetic process
BB784_12615	COG3038	cytochrome b561
BB784_12635	COG0583	DNA-binding transcription factor activity
BB784_12640	COG3485	protocatechuate 3,4-dioxygenase
BB784_12645	COG3485	protocatechuate 3,4-dioxygenase
BB784_12650	COG5383	Protein conserved in bacteria
BB784_12655	COG2272	Belongs to the type-B carboxylesterase lipase family
BB784_12670	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB784_12675	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BB784_12680	COG1275	C4-dicarboxylate transporter malic acid transport protein
BB784_12685	COG0500	methyltransferase
BB784_12695	COG0697	spore germination
BB784_12700	COG3708	Transcriptional regulator
BB784_12700	COG2207	Transcriptional regulator
BB784_12705	COG3135	benzoate transporter
BB784_12710	COG1396	sequence-specific DNA binding
BB784_12720	COG0826	peptidase U32
BB784_12740	COG1294	oxidase, subunit
BB784_12745	COG1271	oxidase subunit
BB784_12750	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB784_12755	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BB784_12760	COG3842	ATPase activity
BB784_12765	COG1176	ABC-type spermidine putrescine transport system, permease component I
BB784_12770	COG1177	transmembrane transport
BB784_12775	COG1012	belongs to the aldehyde dehydrogenase family
BB784_12810	COG1012	belongs to the aldehyde dehydrogenase family
BB784_12820	COG0747	negative chemotaxis
BB784_12830	COG3238	Protein conserved in bacteria
BB784_12835	COG1247	-acetyltransferase
BB784_12845	COG2130	NADP-dependent
BB784_12860	COG3691	Protein conserved in bacteria
BB784_12865	COG1228	amidohydrolase
BB784_12870	COG4772	TonB-dependent receptor
BB784_12900	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB784_12910	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB784_12925	COG0765	amino acid transport
BB784_12930	COG1126	abc transporter atp-binding protein
BB784_12940	COG0625	glutathione transferase activity
BB784_12970	COG2211	Major facilitator Superfamily
BB784_12985	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BB784_12990	COG3842	ATPase activity
BB784_12995	COG1840	ABC-type Fe3 transport system, periplasmic component
BB784_13000	COG1178	ABC-type Fe3 transport system permease component
BB784_13005	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BB784_13010	COG2181	nitrate reductase activity
BB784_13015	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BB784_13020	COG1140	nitrate reductase beta subunit
BB784_13025	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BB784_13045	COG1414	Transcriptional regulator
BB784_13050	COG4948	Mandelate Racemase Muconate Lactonizing
BB784_13055	COG4829	muconolactone delta-isomerase
BB784_13060	COG3485	protocatechuate 3,4-dioxygenase
BB784_13090	COG0243	molybdopterin cofactor binding
BB784_13090	COG3383	formate dehydrogenase (NAD+) activity
BB784_13095	COG0243	molybdopterin cofactor binding
BB784_13095	COG3383	formate dehydrogenase (NAD+) activity
BB784_13100	COG0437	4 iron, 4 sulfur cluster binding
BB784_13105	COG2864	formate dehydrogenase
BB784_13120	COG2326	polyphosphate kinase activity
BB784_13130	COG2814	Major facilitator Superfamily
BB784_13140	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB784_13160	COG0747	negative chemotaxis
BB784_13165	COG1064	alcohol dehydrogenase
BB784_13185	COG0488	(ABC) transporter
BB784_13230	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_13235	COG3729	General stress protein
BB784_13250	COG3685	Protein conserved in bacteria
BB784_13260	COG0366	Alpha amylase catalytic
BB784_13270	COG2323	membrane
BB784_13280	COG3111	PFAM Bacterial OB fold (BOF) protein
BB784_13290	COG1764	response to oxidative stress
BB784_13310	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BB784_13315	COG3781	membrane
BB784_13320	COG0243	molybdopterin cofactor binding
BB784_13325	COG0583	DNA-binding transcription factor activity
BB784_13330	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB784_13335	COG2814	Major facilitator Superfamily
BB784_13345	COG1285	pathogenesis
BB784_13350	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BB784_13360	COG0583	DNA-binding transcription factor activity
BB784_13380	COG0519	Catalyzes the synthesis of GMP from XMP
BB784_13380	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BB784_13425	COG0596	Alpha beta hydrolase
BB784_13430	COG0745	RESPONSE REGULATOR receiver
BB784_13435	COG2205	protein histidine kinase activity
BB784_13450	COG0076	glutamate decarboxylase activity
BB784_13455	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BB784_13460	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BB784_13465	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB784_13470	COG1116	anion transmembrane transporter activity
BB784_13475	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BB784_13490	COG0673	inositol 2-dehydrogenase activity
BB784_13505	COG3706	GGDEF domain
BB784_13510	COG0402	S-adenosylhomocysteine deaminase activity
BB784_13515	COG1953	Uracil, thiamine, allantoin
BB784_13555	COG0406	alpha-ribazole phosphatase activity
BB784_13565	COG1335	isochorismatase
BB784_13580	COG2207	Transcriptional regulator
BB784_13605	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BB784_13630	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BB784_13685	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BB784_13695	COG2070	2-Nitropropane dioxygenase
BB784_13700	COG0583	DNA-binding transcription factor activity
BB784_13705	COG1662	PFAM IS1 transposase
BB784_13710	COG3677	Transposase
BB784_13725	COG1902	pentaerythritol trinitrate reductase activity
BB784_13730	COG4529	Protein conserved in bacteria
BB784_13735	COG0477	Major facilitator Superfamily
BB784_13780	COG2223	nitrite transmembrane transporter activity
BB784_13790	COG1609	Transcriptional regulator
BB784_13795	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_13805	COG3037	sugar-specific permease SgaT UlaA
BB784_13810	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BB784_13820	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB784_13825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB784_13825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB784_13825	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BB784_13835	COG1652	LysM domain
BB784_13850	COG1840	ABC-type Fe3 transport system, periplasmic component
BB784_13865	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BB784_13865	COG0456	acetyltransferase
BB784_13875	COG0667	Aldo Keto reductase
BB784_13880	COG0667	Aldo Keto reductase
BB784_13885	COG3386	PFAM SMP-30 Gluconolaconase
BB784_13890	COG0667	Aldo Keto reductase
BB784_13910	COG2801	Transposase and inactivated derivatives
BB784_13925	COG4977	sequence-specific DNA binding
BB784_13945	COG4977	sequence-specific DNA binding
BB784_13950	COG1349	DNA-binding transcription factor activity
BB784_13965	COG1349	DNA-binding transcription factor activity
BB784_13970	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BB784_13975	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB784_13980	COG0738	Major facilitator superfamily
BB784_14025	COG1929	Belongs to the glycerate kinase type-1 family
BB784_14030	COG3835	regulator
BB784_14050	COG2186	Transcriptional regulator
BB784_14055	COG1263	PTS System
BB784_14055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_14075	COG2814	Major facilitator Superfamily
BB784_14080	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_14080	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_14100	COG2819	hydrolase of the alpha beta superfamily
BB784_14105	COG5001	Diguanylate cyclase
BB784_14105	COG3300	MHYT domain
BB784_14120	COG0024	Methionine aminopeptidase
BB784_14140	COG3188	usher protein
BB784_14160	COG3550	peptidyl-serine autophosphorylation
BB784_14165	COG1396	sequence-specific DNA binding
BB784_14170	COG2351	hydroxyisourate hydrolase activity
BB784_14175	COG3648	Uricase
BB784_14175	COG3195	allantoin biosynthetic process
BB784_14180	COG2233	PERMEase
BB784_14210	COG2207	Transcriptional regulator
BB784_14225	COG4628	conserved protein (DUF2132)
BB784_14245	COG2011	ABC-type metal ion transport system permease component
BB784_14250	COG2070	2-Nitropropane dioxygenase
BB784_14265	COG0477	Major facilitator Superfamily
BB784_14280	COG0477	Major facilitator Superfamily
BB784_14335	COG2199	diguanylate cyclase activity
BB784_14350	COG1012	belongs to the aldehyde dehydrogenase family
BB784_14355	COG0583	DNA-binding transcription factor activity
BB784_14365	COG0039	L-malate dehydrogenase activity
BB784_14370	COG1349	DNA-binding transcription factor activity
BB784_14375	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BB784_14380	COG3395	kinase activity
BB784_14390	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BB784_14395	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BB784_14400	COG2271	Major facilitator Superfamily
BB784_14425	COG1846	Transcriptional regulator
BB784_14430	COG4977	sequence-specific DNA binding
BB784_14445	COG2814	Major facilitator Superfamily
BB784_14460	COG0411	ABC transporter
BB784_14480	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BB784_14525	COG2223	nitrite transmembrane transporter activity
BB784_14530	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BB784_14545	COG1349	DNA-binding transcription factor activity
BB784_14550	COG2084	Dehydrogenase
BB784_14555	COG3395	kinase activity
BB784_14560	COG0235	Class ii aldolase
BB784_14565	COG3622	Belongs to the hyi family
BB784_14570	COG2610	gluconate transmembrane transporter activity
BB784_14575	COG2207	Transcriptional regulator
BB784_14575	COG3708	Transcriptional regulator
BB784_14590	COG2200	EAL domain
BB784_14595	COG1546	Belongs to the CinA family
BB784_14600	COG0071	Belongs to the small heat shock protein (HSP20) family
BB784_14620	COG2197	response regulator
BB784_14635	COG2135	peptidase activity
BB784_14640	COG2207	Transcriptional regulator
BB784_14655	COG4221	oxidoreductase activity
BB784_14660	COG1802	Transcriptional regulator
BB784_14665	COG0589	response to stress
BB784_14670	COG0246	Mannitol dehydrogenase
BB784_14675	COG2271	Major facilitator Superfamily
BB784_14690	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB784_14710	COG0437	4 iron, 4 sulfur cluster binding
BB784_14715	COG3302	dmso reductase anchor subunit
BB784_14730	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BB784_14735	COG1940	carbohydrate kinase activity
BB784_14740	COG0583	DNA-binding transcription factor activity
BB784_14745	COG2814	Major facilitator Superfamily
BB784_14750	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BB784_14770	COG3591	Belongs to the peptidase S1B family
BB784_14795	COG0628	permease
BB784_14825	COG0679	Auxin Efflux Carrier
BB784_14835	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BB784_14870	COG3290	protein histidine kinase activity
BB784_14875	COG4565	transcriptional regulatory protein
BB784_14885	COG1053	succinate dehydrogenase
BB784_14905	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BB784_14905	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BB784_14920	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB784_14925	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BB784_14935	COG0183	Belongs to the thiolase family
BB784_14940	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BB784_14950	COG1414	Transcriptional regulator
BB784_14955	COG2840	Smr protein MutS2
BB784_14960	COG0583	DNA-binding transcription factor activity
BB784_14970	COG1473	amidohydrolase
BB784_14975	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BB784_14985	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BB784_14990	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BB784_15005	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BB784_15010	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BB784_15040	COG0531	amino acid
BB784_15050	COG3136	membrane protein required for alginate biosynthesis
BB784_15055	COG0745	RESPONSE REGULATOR receiver
BB784_15065	COG2205	protein histidine kinase activity
BB784_15075	COG0114	fumarate hydratase activity
BB784_15080	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BB784_15080	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BB784_15085	COG1482	cell wall glycoprotein biosynthetic process
BB784_15090	COG5339	Protein conserved in bacteria
BB784_15095	COG1609	Transcriptional regulator
BB784_15100	COG1263	PTS System
BB784_15100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_15105	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BB784_15130	COG2391	methyltransferase activity
BB784_15135	COG0425	Belongs to the sulfur carrier protein TusA family
BB784_15140	COG5562	phage envelope protein
BB784_15145	COG0401	homolog of Blt101
BB784_15150	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BB784_15155	COG1012	belongs to the aldehyde dehydrogenase family
BB784_15165	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BB784_15170	COG0477	Major facilitator Superfamily
BB784_15175	COG1113	amino acid transport
BB784_15180	COG2988	succinylglutamate desuccinylase activity
BB784_15185	COG3724	N-succinylarginine dihydrolase activity
BB784_15190	COG1012	belongs to the aldehyde dehydrogenase family
BB784_15195	COG3138	arginine N-succinyltransferase
BB784_15200	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BB784_15210	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BB784_15215	COG0667	Aldo Keto reductase
BB784_15220	COG0583	DNA-binding transcription factor activity
BB784_15240	COG1538	Outer membrane efflux protein
BB784_15250	COG1643	Atp-dependent helicase
BB784_15265	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BB784_15270	COG3327	negative regulation of DNA-templated transcription, initiation
BB784_15275	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
BB784_15280	COG0183	Belongs to the thiolase family
BB784_15285	COG2050	protein possibly involved in aromatic compounds catabolism
BB784_15290	COG1250	3-hydroxyacyl-CoA dehydrogenase
BB784_15295	COG1024	Enoyl-CoA hydratase
BB784_15300	COG1024	Enoyl-CoA hydratase
BB784_15305	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB784_15310	COG2151	metal-sulfur cluster biosynthetic enzyme
BB784_15315	COG3396	Phenylacetate-CoA oxygenase
BB784_15320	COG3460	Phenylacetate-CoA oxygenase
BB784_15325	COG3396	Phenylacetate-CoA oxygenase
BB784_15330	COG2030	dehydratase
BB784_15330	COG1012	belongs to the aldehyde dehydrogenase family
BB784_15355	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BB784_15370	COG2072	flavoprotein involved in K transport
BB784_15375	COG0583	DNA-binding transcription factor activity
BB784_15380	COG1126	abc transporter atp-binding protein
BB784_15390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_15405	COG1012	belongs to the aldehyde dehydrogenase family
BB784_15410	COG2207	Transcriptional regulator
BB784_15415	COG3784	Protein of unknown function (DUF1318)
BB784_15425	COG2911	Protein conserved in bacteria
BB784_15430	COG0586	Pfam SNARE associated Golgi protein
BB784_15435	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BB784_15440	COG3187	Heat shock protein
BB784_15445	COG3042	response to heat
BB784_15455	COG1013	pyruvate-flavodoxin oxidoreductase activity
BB784_15455	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BB784_15455	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BB784_15455	COG0674	pyruvate-flavodoxin oxidoreductase activity
BB784_15460	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BB784_15470	COG0589	response to stress
BB784_15480	COG0513	Belongs to the DEAD box helicase family
BB784_15500	COG1349	DNA-binding transcription factor activity
BB784_15505	COG0673	inositol 2-dehydrogenase activity
BB784_15520	COG1113	amino acid transport
BB784_15525	COG1522	sequence-specific DNA binding
BB784_15535	COG1448	Aminotransferase
BB784_15540	COG2011	ABC-type metal ion transport system permease component
BB784_15555	COG0436	Aminotransferase
BB784_15585	COG0583	DNA-binding transcription factor activity
BB784_15605	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_15610	COG1309	transcriptional regulator
BB784_15615	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_15710	COG2885	chlorophyll binding
BB784_15740	COG0693	protein deglycase activity
BB784_15745	COG1078	dGTPase activity
BB784_15750	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_15755	COG0583	DNA-binding transcription factor activity
BB784_15775	COG0656	L-ascorbic acid biosynthetic process
BB784_15805	COG4166	transmembrane transport
BB784_15815	COG2866	Carboxypeptidase
BB784_15820	COG4948	Mandelate Racemase Muconate Lactonizing
BB784_15825	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BB784_15830	COG3180	Ammonia monooxygenase
BB784_15835	COG3283	Transcriptional regulator of aromatic amino acids metabolism
BB784_15840	COG1486	melibiose metabolic process
BB784_15845	COG0583	DNA-binding transcription factor activity
BB784_15855	COG3106	COG3106 Predicted ATPase
BB784_15865	COG1983	PspC domain protein
BB784_15875	COG1842	Phage shock protein A
BB784_15880	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BB784_15890	COG1473	amidohydrolase
BB784_15905	COG0702	epimerase
BB784_15915	COG4168	peptide transport system, permease
BB784_15920	COG2135	peptidase activity
BB784_15935	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BB784_15940	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BB784_15950	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BB784_15965	COG3316	Transposase and inactivated derivatives
BB784_15990	COG1196	nuclear chromosome segregation
BB784_15990	COG1196	nuclear chromosome segregation
BB784_16130	COG0484	heat shock protein binding
BB784_16140	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
BB784_16210	COG1484	DNA-dependent DNA replication
BB784_16240	COG1662	PFAM IS1 transposase
BB784_16240	COG3677	Transposase
BB784_16265	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB784_16290	COG4171	peptide transport system, permease
BB784_16305	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BB784_16315	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BB784_16325	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB784_16325	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB784_16340	COG1349	DNA-binding transcription factor activity
BB784_16355	COG0023	Translation Initiation Factor
BB784_16365	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BB784_16370	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BB784_16385	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BB784_16410	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BB784_16425	COG0616	signal peptide processing
BB784_16435	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_16440	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BB784_16445	COG1187	pseudouridine synthase activity
BB784_16460	COG0653	protein targeting
BB784_16465	COG2963	transposase activity
BB784_16470	COG2801	Transposase and inactivated derivatives
BB784_16475	COG0583	DNA-binding transcription factor activity
BB784_16485	COG0009	L-threonylcarbamoyladenylate synthase
BB784_16495	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BB784_16500	COG0512	Glutamine amidotransferase of anthranilate synthase
BB784_16500	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BB784_16505	COG0135	phosphoribosylanthranilate isomerase activity
BB784_16505	COG0134	indole-3-glycerol-phosphate synthase activity
BB784_16540	COG4774	siderophore transport
BB784_16550	COG3047	cAMP biosynthetic process
BB784_16575	COG1607	acyl-coa hydrolase
BB784_16585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB784_16590	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_16595	COG1988	membrane-bound metal-dependent
BB784_16610	COG0753	catalase activity
BB784_16620	COG1486	melibiose metabolic process
BB784_16625	COG2169	Transcriptional regulator
BB784_16625	COG1917	Cupin 2, conserved barrel domain protein
BB784_16630	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB784_16635	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_16645	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_16650	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BB784_16660	COG0322	excinuclease ABC activity
BB784_16665	COG3678	ATP-independent chaperone mediated protein folding
BB784_16680	COG3724	N-succinylarginine dihydrolase activity
BB784_16690	COG3138	arginine N-succinyltransferase
BB784_16700	COG0708	Exodeoxyribonuclease III
BB784_16705	COG0398	Pfam SNARE associated Golgi protein
BB784_16710	COG0398	Pfam SNARE associated Golgi protein
BB784_16715	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB784_16720	COG4134	Bacterial extracellular solute-binding protein
BB784_16725	COG4135	transport system, permease component
BB784_16730	COG4136	ATPase activity
BB784_16735	COG2897	thiosulfate sulfurtransferase activity
BB784_16740	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BB784_16745	COG0494	nUDIX hydrolase
BB784_16755	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BB784_16765	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BB784_16775	COG0709	Synthesizes selenophosphate from selenide and ATP
BB784_16785	COG0778	Nitroreductase
BB784_16790	COG0616	signal peptide processing
BB784_16795	COG0252	asparaginase activity
BB784_16800	COG1335	isochorismatase
BB784_16810	COG1403	HNH endonuclease
BB784_16815	COG3139	Protein of unknown function (DUF1315)
BB784_16825	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BB784_16835	COG0656	L-ascorbic acid biosynthetic process
BB784_16840	COG3713	MltA-interacting MipA family protein
BB784_16845	COG2766	serine protein kinase
BB784_16860	COG0386	Belongs to the glutathione peroxidase family
BB784_16885	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_16890	COG0583	DNA-binding transcription factor activity
BB784_16895	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BB784_16900	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BB784_16910	COG0859	PFAM glycosyl transferase family 9
BB784_16915	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BB784_16925	COG2207	Transcriptional regulator
BB784_16930	COG2807	transmembrane transport
BB784_16935	COG0504	CTP synthase activity
BB784_16940	COG1683	Conserved Protein
BB784_16945	COG3189	MarR family transcriptional regulator
BB784_16950	COG3042	response to heat
BB784_16955	COG2199	diguanylate cyclase activity
BB784_16955	COG2203	Gaf domain
BB784_16975	COG3182	Iron-regulated membrane protein
BB784_16985	COG1560	Kdo2-lipid A biosynthetic process
BB784_17010	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BB784_17015	COG3706	GGDEF domain
BB784_17020	COG0583	DNA-binding transcription factor activity
BB784_17025	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BB784_17055	COG1294	oxidase, subunit
BB784_17060	COG1271	oxidase subunit
BB784_17070	COG3685	Protein conserved in bacteria
BB784_17075	COG3685	Protein conserved in bacteria
BB784_17080	COG3729	General stress protein
BB784_17090	COG1063	alcohol dehydrogenase
BB784_17095	COG3813	Protein conserved in bacteria
BB784_17120	COG0640	Transcriptional regulator
BB784_17125	COG0538	isocitrate dehydrogenase activity
BB784_17130	COG1187	pseudouridine synthase activity
BB784_17150	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BB784_17170	COG2205	protein histidine kinase activity
BB784_17175	COG2850	peptidyl-arginine hydroxylation
BB784_17190	COG1176	ABC-type spermidine putrescine transport system, permease component I
BB784_17195	COG1177	transmembrane transport
BB784_17200	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BB784_17210	COG0318	PFAM AMP-dependent synthetase and ligase
BB784_17215	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BB784_17220	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BB784_17225	COG0698	ribose 5-phosphate isomerase
BB784_17240	COG3395	kinase activity
BB784_17255	COG2390	Transcriptional regulator
BB784_17265	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BB784_17275	COG4591	ABC-type transport system involved in lipoprotein release permease component
BB784_17285	COG4591	ABC-type transport system involved in lipoprotein release permease component
BB784_17295	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BB784_17300	COG1376	ErfK ybiS ycfS ynhG family protein
BB784_17300	COG1388	LysM domain
BB784_17315	COG1309	transcriptional regulator
BB784_17330	COG3134	Outer membrane lipoprotein
BB784_17335	COG1252	NADH dehydrogenase
BB784_17365	COG5633	Lipoprotein
BB784_17370	COG0537	adenosine 5'-monophosphoramidase activity
BB784_17380	COG0084	hydrolase, TatD family'
BB784_17385	COG0470	DNA polymerase III
BB784_17395	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BB784_17400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BB784_17405	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BB784_17415	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_17420	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BB784_17440	COG1399	metal-binding, possibly nucleic acid-binding protein
BB784_17460	COG1530	ribonuclease E activity
BB784_17465	COG0583	DNA-binding transcription factor activity
BB784_17470	COG2814	Major facilitator Superfamily
BB784_17490	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB784_17545	COG1560	Kdo2-lipid A biosynthetic process
BB784_17565	COG5645	(Lipo)protein
BB784_17605	COG3381	protein complex oligomerization
BB784_17635	COG1309	transcriptional regulator
BB784_17640	COG0583	DNA-binding transcription factor activity
BB784_17650	COG1335	isochorismatase
BB784_17665	COG1702	phosphate starvation-inducible protein PhoH
BB784_17680	COG0672	)-iron permease
BB784_17685	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BB784_17700	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BB784_17715	COG1309	transcriptional regulator
BB784_17750	COG2233	PERMEase
BB784_17770	COG3729	General stress protein
BB784_17795	COG1733	regulation of RNA biosynthetic process
BB784_17800	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_17815	COG0531	amino acid
BB784_17825	COG0174	glutamine synthetase
BB784_17830	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BB784_17835	COG1917	Cupin 2, conserved barrel domain protein
BB784_17835	COG1396	sequence-specific DNA binding
BB784_17840	COG1012	belongs to the aldehyde dehydrogenase family
BB784_17845	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BB784_17850	COG0583	DNA-binding transcription factor activity
BB784_17855	COG0473	3-isopropylmalate dehydrogenase activity
BB784_17860	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BB784_17865	COG4638	Rieske (2fe-2S)
BB784_17870	COG1012	belongs to the aldehyde dehydrogenase family
BB784_17875	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB784_17905	COG0670	Belongs to the BI1 family
BB784_17920	COG2207	Transcriptional regulator
BB784_17925	COG1881	PFAM PEBP family protein
BB784_17940	COG1832	CoA-binding protein
BB784_17950	COG0210	DNA helicase
BB784_17955	COG3304	Inner membrane component domain
BB784_17960	COG1289	transmembrane transporter activity
BB784_17965	COG3070	regulator of competence-specific genes
BB784_17990	COG1067	ATP-dependent peptidase activity
BB784_18000	COG3130	regulation of translation
BB784_18010	COG3009	Protein conserved in bacteria
BB784_18015	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BB784_18015	COG3008	intermembrane lipid transfer
BB784_18020	COG2995	paraquat-inducible protein a
BB784_18025	COG0488	(ABC) transporter
BB784_18035	COG3217	Mosc domain protein beta barrel domain protein
BB784_18035	COG0633	Ferredoxin
BB784_18050	COG0431	NADPH-dependent FMN reductase
BB784_18060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB784_18065	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB784_18075	COG0308	aminopeptidase N
BB784_18090	COG1473	amidohydrolase
BB784_18100	COG0814	amino acid
BB784_18110	COG1522	sequence-specific DNA binding
BB784_18120	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BB784_18125	COG1448	Aminotransferase
BB784_18130	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BB784_18135	COG3108	Peptidase M15
BB784_18145	COG2989	Protein conserved in bacteria
BB784_18155	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BB784_18165	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BB784_18170	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BB784_18175	COG3173	Aminoglycoside phosphotransferase
BB784_18190	COG3214	Protein conserved in bacteria
BB784_18205	COG2333	competence protein COMEC
BB784_18205	COG0658	competence protein
BB784_18215	COG0539	negative regulation of cytoplasmic translation
BB784_18235	COG2323	membrane
BB784_18240	COG1944	ATP diphosphatase activity
BB784_18245	COG2116	formate transmembrane transporter activity
BB784_18250	COG1882	Formate acetyltransferase
BB784_18255	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BB784_18260	COG0477	Major facilitator Superfamily
BB784_18270	COG3302	dmso reductase anchor subunit
BB784_18275	COG0437	4 iron, 4 sulfur cluster binding
BB784_18280	COG0243	molybdopterin cofactor binding
BB784_18290	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BB784_18300	COG1178	ABC-type Fe3 transport system permease component
BB784_18300	COG1674	ftsk spoiiie
BB784_18320	COG0492	ferredoxin-NADP+ reductase activity
BB784_18325	COG4988	ABC transporter
BB784_18330	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BB784_18345	COG0542	response to heat
BB784_18355	COG1278	Cold shock
BB784_18370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_18375	COG3593	DNA synthesis involved in DNA repair
BB784_18380	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BB784_18385	COG2431	L-lysine efflux transmembrane transporter activity
BB784_18395	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB784_18405	COG0028	Belongs to the TPP enzyme family
BB784_18410	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BB784_18415	COG0702	epimerase
BB784_18420	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BB784_18425	COG3023	N-Acetylmuramoyl-L-alanine amidase
BB784_18430	COG5001	Diguanylate cyclase
BB784_18430	COG4251	negative regulation of phosphorylation
BB784_18430	COG2203	Gaf domain
BB784_18430	COG3706	GGDEF domain
BB784_18450	COG1126	abc transporter atp-binding protein
BB784_18455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_18460	COG4215	(ABC) transporter
BB784_18465	COG4160	amino acid transport
BB784_18470	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_18475	COG5002	protein histidine kinase activity
BB784_18480	COG0745	RESPONSE REGULATOR receiver
BB784_18495	COG1177	transmembrane transport
BB784_18500	COG1176	ABC-type spermidine putrescine transport system, permease component I
BB784_18505	COG3842	ATPase activity
BB784_18510	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BB784_18525	COG0778	Nitroreductase
BB784_18535	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BB784_18555	COG3226	Transcriptional regulator
BB784_18560	COG0738	Major facilitator superfamily
BB784_18565	COG0561	phosphatase activity
BB784_18570	COG2814	Major facilitator Superfamily
BB784_18580	COG0671	phosphoesterase, PA-phosphatase related
BB784_18585	COG1349	DNA-binding transcription factor activity
BB784_18590	COG1686	Belongs to the peptidase S11 family
BB784_18600	COG0625	glutathione transferase activity
BB784_18605	COG2133	pyrroloquinoline quinone binding
BB784_18615	COG2223	nitrite transmembrane transporter activity
BB784_18635	COG0747	negative chemotaxis
BB784_18650	COG0303	'Molybdopterin
BB784_18655	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BB784_18660	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BB784_18670	COG0561	phosphatase activity
BB784_18680	COG1609	Transcriptional regulator
BB784_18685	COG2271	Major facilitator Superfamily
BB784_18695	COG0488	(ABC) transporter
BB784_18705	COG1376	ErfK ybiS ycfS ynhG family protein
BB784_18710	COG2188	Transcriptional regulator
BB784_18715	COG2723	6-phospho-beta-galactosidase activity
BB784_18725	COG1321	iron dependent repressor
BB784_18735	COG2194	sulfuric ester hydrolase activity
BB784_18740	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BB784_18760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_18765	COG0765	amino acid transport
BB784_18770	COG1126	abc transporter atp-binding protein
BB784_18775	COG0668	transmembrane transport
BB784_18785	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BB784_18795	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BB784_18805	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BB784_18810	COG1199	ATP-dependent helicase activity
BB784_18815	COG0513	Belongs to the DEAD box helicase family
BB784_18820	COG3958	Transketolase
BB784_18825	COG3959	Transketolase, thiamine diphosphate binding domain
BB784_18830	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_18835	COG2271	Major facilitator Superfamily
BB784_18845	COG0583	DNA-binding transcription factor activity
BB784_18850	COG1309	transcriptional regulator
BB784_18855	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_18860	COG1131	(ABC) transporter
BB784_18865	COG0842	Transport permease protein
BB784_18870	COG0842	Transport permease protein
BB784_18880	COG3568	Endonuclease Exonuclease Phosphatase
BB784_18885	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BB784_18890	COG0392	lysyltransferase activity
BB784_18895	COG0670	Belongs to the BI1 family
BB784_18900	COG0314	molybdopterin synthase activity
BB784_18905	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BB784_18915	COG0521	Mo-molybdopterin cofactor biosynthetic process
BB784_18940	COG0745	RESPONSE REGULATOR receiver
BB784_18945	COG0642	Histidine kinase
BB784_18965	COG0410	ABC transporter
BB784_18975	COG2226	methyltransferase
BB784_18995	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BB784_19000	COG1881	PFAM PEBP family protein
BB784_19040	COG4677	pectinesterase activity
BB784_19050	COG0589	response to stress
BB784_19055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_19090	COG0789	Transcriptional regulator
BB784_19095	COG2200	EAL domain
BB784_19120	COG0561	phosphatase activity
BB784_19130	COG4149	molybdate abc transporter
BB784_19135	COG0725	ABC transporter, periplasmic molybdate-binding protein
BB784_19145	COG3585	molybdate ion transport
BB784_19145	COG2005	Transcriptional regulator
BB784_19155	COG1119	ATPase activity
BB784_19170	COG1085	galactose-1-phosphate uridylyltransferase
BB784_19180	COG2017	converts alpha-aldose to the beta-anomer
BB784_19190	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BB784_19205	COG3201	nicotinamide mononucleotide transporter
BB784_19210	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BB784_19260	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BB784_19265	COG2885	chlorophyll binding
BB784_19275	COG3064	Membrane
BB784_19280	COG0848	biopolymer transport protein
BB784_19285	COG0811	peptide transport
BB784_19290	COG0824	Thioesterase
BB784_19295	COG3790	cyd operon protein YbgE
BB784_19300	COG4890	Cyd operon protein YbgT
BB784_19305	COG1294	oxidase, subunit
BB784_19310	COG1271	oxidase subunit
BB784_19325	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BB784_19335	COG0508	dehydrogenase complex catalyzes the overall conversion of
BB784_19340	COG0567	Dehydrogenase, E1 component
BB784_19345	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BB784_19350	COG1053	succinate dehydrogenase
BB784_19355	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BB784_19360	COG2009	succinate dehydrogenase
BB784_19410	COG1984	allophanate hydrolase subunit 2
BB784_19415	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BB784_19420	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BB784_19430	COG0415	Belongs to the DNA photolyase family
BB784_19460	COG2205	protein histidine kinase activity
BB784_19465	COG0745	RESPONSE REGULATOR receiver
BB784_19475	COG0033	Phosphoglucomutase
BB784_19490	COG0596	Alpha beta hydrolase
BB784_19505	COG0735	belongs to the Fur family
BB784_19550	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BB784_19555	COG1846	Transcriptional regulator
BB784_19555	COG1940	carbohydrate kinase activity
BB784_19560	COG0647	UMP catabolic process
BB784_19565	COG0367	asparagine synthase
BB784_19610	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BB784_19620	COG1702	phosphate starvation-inducible protein PhoH
BB784_19630	COG4535	Mg2 and Co2 transporter CorC
BB784_19645	COG0765	amino acid transport
BB784_19650	COG0765	amino acid transport
BB784_19655	COG1126	abc transporter atp-binding protein
BB784_19675	COG2888	peptidyl-tyrosine sulfation
BB784_19690	COG1466	dna polymerase III delta subunit
BB784_19710	COG0799	negative regulation of ribosome biogenesis
BB784_19720	COG0768	penicillin binding
BB784_19725	COG0772	Belongs to the SEDS family
BB784_19730	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BB784_19735	COG1686	Belongs to the peptidase S11 family
BB784_19750	COG0583	DNA-binding transcription factor activity
BB784_19765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BB784_19775	COG1278	Cold shock
BB784_19785	COG3069	C4-dicarboxylate transmembrane transporter activity
BB784_19790	COG3719	Belongs to the RNase T2 family
BB784_19795	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BB784_19800	COG0589	response to stress
BB784_19810	COG0450	alkyl hydroperoxide reductase
BB784_19815	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BB784_19820	COG0583	DNA-binding transcription factor activity
BB784_19825	COG3969	phosphoadenosine phosphosulfate
BB784_19830	COG1475	DNA binding
BB784_19835	COG0436	Aminotransferase
BB784_19860	COG1129	ABC transporter
BB784_19865	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_19870	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_19880	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BB784_19895	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BB784_19905	COG0402	S-adenosylhomocysteine deaminase activity
BB784_19915	COG0483	inositol monophosphate 1-phosphatase activity
BB784_19920	COG2271	Major facilitator Superfamily
BB784_19950	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_19955	COG1129	ABC transporter
BB784_19960	COG0371	Dehydrogenase
BB784_19965	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_19980	COG2879	small protein
BB784_19985	COG1966	Carbon starvation protein
BB784_19995	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_20000	COG1535	isochorismatase
BB784_20000	COG3433	isochorismatase activity
BB784_20005	COG1021	2,3-dihydroxybenzoate-AMP ligase
BB784_20010	COG1169	isochorismate synthase
BB784_20015	COG4592	Periplasmic binding protein
BB784_20025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_20030	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_20035	COG1120	ATPase activity
BB784_20040	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BB784_20040	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BB784_20045	COG3251	PFAM MbtH domain protein
BB784_20050	COG2382	esterase
BB784_20060	COG4771	TonB-dependent receptor
BB784_20070	COG1879	ABC-type sugar transport system periplasmic component
BB784_20080	COG1129	ABC transporter
BB784_20085	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_20090	COG5464	transposase or invertase
BB784_20095	COG2390	Transcriptional regulator
BB784_20100	COG3959	Transketolase, thiamine diphosphate binding domain
BB784_20105	COG3958	Transketolase
BB784_20115	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BB784_20125	COG0583	DNA-binding transcription factor activity
BB784_20130	COG0668	transmembrane transport
BB784_20140	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BB784_20170	COG0747	negative chemotaxis
BB784_20175	COG0601	transmembrane transport
BB784_20180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB784_20185	COG0444	Belongs to the ABC transporter superfamily
BB784_20190	COG4608	Belongs to the ABC transporter superfamily
BB784_20200	COG4221	oxidoreductase activity
BB784_20210	COG4215	(ABC) transporter
BB784_20215	COG0765	amino acid transport
BB784_20220	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BB784_20235	COG0697	spore germination
BB784_20250	COG4608	Belongs to the ABC transporter superfamily
BB784_20255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB784_20265	COG4166	transmembrane transport
BB784_20275	COG3698	Phosphodiester glycosidase
BB784_20320	COG2315	Protein conserved in bacteria
BB784_20325	COG0778	Nitroreductase
BB784_20335	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_20345	COG3716	PTS system mannose fructose sorbose family IID component
BB784_20350	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BB784_20355	COG2222	sugar isomerase
BB784_20360	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BB784_20360	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BB784_20380	COG0477	Major facilitator Superfamily
BB784_20385	COG0668	transmembrane transport
BB784_20400	COG0673	inositol 2-dehydrogenase activity
BB784_20410	COG2211	Major facilitator Superfamily
BB784_20415	COG1113	amino acid transport
BB784_20430	COG1012	belongs to the aldehyde dehydrogenase family
BB784_20435	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BB784_20450	COG0531	amino acid
BB784_20465	COG4680	protein conserved in bacteria
BB784_20505	COG0667	Aldo Keto reductase
BB784_20510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_20515	COG1473	amidohydrolase
BB784_20555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_20560	COG1120	ATPase activity
BB784_20565	COG1566	PFAM secretion protein HlyD family protein
BB784_20620	COG4211	Belongs to the binding-protein-dependent transport system permease family
BB784_20625	COG1129	ABC transporter
BB784_20640	COG0673	inositol 2-dehydrogenase activity
BB784_20670	COG3104	oligopeptide transport
BB784_20675	COG1982	Orn Lys Arg decarboxylase major
BB784_20680	COG0531	amino acid
BB784_20690	COG3710	Transcriptional regulator
BB784_20700	COG1560	Kdo2-lipid A biosynthetic process
BB784_20715	COG3188	usher protein
BB784_20720	COG3121	Chaperone
BB784_20725	COG3539	Fimbrial protein
BB784_20785	COG2501	S4 domain
BB784_20795	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BB784_20815	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BB784_20820	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BB784_20840	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BB784_20845	COG4181	ATPase activity
BB784_20850	COG2755	lipolytic protein G-D-S-L family
BB784_20855	COG0300	oxidoreductase activity
BB784_20860	COG3118	belongs to the thioredoxin family
BB784_20865	COG0390	transport system, permease component
BB784_20870	COG4619	ABC transporter
BB784_20875	COG0330	HflC and HflK could
BB784_20880	COG1585	Membrane protein implicated in regulation of membrane protease activity
BB784_20895	COG3735	TraB family
BB784_20900	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BB784_20910	COG2223	nitrite transmembrane transporter activity
BB784_20925	COG4651	solute:proton antiporter activity
BB784_20925	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BB784_20930	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB784_20970	COG2832	Protein of unknown function (DUF454)
BB784_20975	COG3923	Primosomal replication protein n
BB784_20985	COG5464	transposase or invertase
BB784_20990	COG1196	nuclear chromosome segregation
BB784_20990	COG3264	Mechanosensitive ion channel
BB784_20995	COG1309	transcriptional regulator
BB784_21000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_21005	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB784_21020	COG0110	maltose O-acetyltransferase activity
BB784_21070	COG1874	Beta-galactosidase
BB784_21075	COG3867	Arabinogalactan endo-beta-1,4-galactanase
BB784_21080	COG3833	ABC-type maltose transport systems, permease component
BB784_21085	COG1175	transmembrane transport
BB784_21090	COG2182	Extracellular solute-binding protein
BB784_21105	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BB784_21120	COG2364	Membrane
BB784_21150	COG3695	enzyme binding
BB784_21155	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BB784_21160	COG1946	Acyl-CoA thioesterase
BB784_21165	COG0004	ammonium transporteR
BB784_21170	COG0347	Belongs to the P(II) protein family
BB784_21175	COG1132	(ABC) transporter
BB784_21180	COG1132	(ABC) transporter
BB784_21185	COG1522	sequence-specific DNA binding
BB784_21200	COG4533	DNA binding
BB784_21210	COG0824	Thioesterase
BB784_21215	COG1555	photosystem II stabilization
BB784_21220	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BB784_21225	COG0776	regulation of translation
BB784_21230	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BB784_21255	COG0271	Belongs to the BolA IbaG family
BB784_21260	COG3056	Lipoprotein
BB784_21265	COG2223	nitrite transmembrane transporter activity
BB784_21270	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BB784_21275	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BB784_21280	COG1845	cytochrome c oxidase, subunit III
BB784_21285	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BB784_21300	COG1414	Transcriptional regulator
BB784_21305	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BB784_21310	COG1053	succinate dehydrogenase
BB784_21335	COG0673	inositol 2-dehydrogenase activity
BB784_21340	COG2814	Major facilitator Superfamily
BB784_21350	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BB784_21355	COG0693	protein deglycase activity
BB784_21375	COG0142	geranyltranstransferase activity
BB784_21385	COG0667	Aldo Keto reductase
BB784_21390	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BB784_21410	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BB784_21410	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BB784_21420	COG4238	major outer membrane lipoprotein
BB784_21440	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BB784_21445	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BB784_21450	COG1862	Preprotein translocase
BB784_21475	COG0450	alkyl hydroperoxide reductase
BB784_21480	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_21495	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB784_21505	COG1228	amidohydrolase
BB784_21515	COG1335	isochorismatase
BB784_21520	COG0583	DNA-binding transcription factor activity
BB784_21525	COG0366	Alpha amylase catalytic
BB784_21535	COG1114	Component of the transport system for branched-chain amino acids
BB784_21550	COG0420	3'-5' exonuclease activity
BB784_21555	COG0419	ATPase involved in DNA repair
BB784_21560	COG1940	carbohydrate kinase activity
BB784_21575	COG4126	flavin adenine dinucleotide binding
BB784_21585	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BB784_21590	COG3416	Protein conserved in bacteria
BB784_21600	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BB784_21610	COG1785	Belongs to the alkaline phosphatase family
BB784_21630	COG1181	Belongs to the D-alanine--D-alanine ligase family
BB784_21650	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BB784_21655	COG1335	isochorismatase
BB784_21660	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BB784_21665	COG0113	porphobilinogen synthase activity
BB784_21670	COG1943	Transposase
BB784_21680	COG2175	clavaminate synthase activity
BB784_21685	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB784_21690	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BB784_21695	COG4521	taurine ABC transporter
BB784_21700	COG2040	homocysteine
BB784_21705	COG0833	amino acid
BB784_21720	COG4303	Ethanolamine ammonia lyase large subunit
BB784_21725	COG4302	ethanolamine ammonia-lyase activity
BB784_21755	COG0411	ABC transporter
BB784_21760	COG0410	ABC transporter
BB784_21770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_21775	COG1126	abc transporter atp-binding protein
BB784_21780	COG4597	amino acid ABC transporter
BB784_21785	COG0765	amino acid transport
BB784_21800	COG3188	usher protein
BB784_21825	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
BB784_21835	COG3639	organic phosphonate transmembrane transporter activity
BB784_21850	COG2801	Transposase and inactivated derivatives
BB784_21870	COG0791	NLP P60 protein
BB784_21900	COG0582	viral genome integration into host DNA
BB784_21935	COG3121	Chaperone
BB784_21940	COG3188	usher protein
BB784_21970	COG2909	trisaccharide binding
BB784_21975	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BB784_21980	COG0022	dehydrogenase e1 component
BB784_21985	COG0508	dehydrogenase complex catalyzes the overall conversion of
BB784_21990	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BB784_22005	COG1830	Aldolase
BB784_22015	COG1070	Carbohydrate kinase
BB784_22020	COG1028	Short-chain dehydrogenase reductase Sdr
BB784_22025	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BB784_22035	COG0625	glutathione transferase activity
BB784_22040	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BB784_22060	COG0579	oxidoreductase
BB784_22065	COG1012	belongs to the aldehyde dehydrogenase family
BB784_22070	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BB784_22075	COG1113	amino acid transport
BB784_22080	COG1802	Transcriptional regulator
BB784_22100	COG2195	Cleaves the N-terminal amino acid of tripeptides
BB784_22105	COG0454	-acetyltransferase
BB784_22120	COG2991	Protein conserved in bacteria
BB784_22135	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BB784_22140	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BB784_22160	COG3034	peptidoglycan biosynthetic process
BB784_22165	COG0121	glutamine amidotransferase
BB784_22175	COG1960	acyl-CoA dehydrogenase activity
BB784_22180	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BB784_22190	COG0583	DNA-binding transcription factor activity
BB784_22200	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB784_22210	COG2226	methyltransferase
BB784_22220	COG1388	LysM domain
BB784_22220	COG0741	lytic transglycosylase activity
BB784_22225	COG2226	methyltransferase
BB784_22235	COG2814	Major facilitator Superfamily
BB784_22240	COG0583	DNA-binding transcription factor activity
BB784_22245	COG0656	L-ascorbic acid biosynthetic process
BB784_22280	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BB784_22290	COG2011	ABC-type metal ion transport system permease component
BB784_22295	COG1464	Belongs to the NlpA lipoprotein family
BB784_22305	COG1720	tRNA m6t6A37 methyltransferase activity
BB784_22315	COG0791	NLP P60 protein
BB784_22320	COG3015	lipoprotein NlpE involved in copper resistance
BB784_22325	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BB784_22330	COG4681	YaeQ
BB784_22340	COG4568	rho-dependent transcription termination
BB784_22350	COG0346	lactoylglutathione lyase activity
BB784_22365	COG0587	DNA-directed DNA polymerase activity
BB784_22395	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BB784_22405	COG0750	zinc metalloprotease
BB784_22410	COG0575	Belongs to the CDS family
BB784_22425	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BB784_22450	COG0024	Methionine aminopeptidase
BB784_22455	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BB784_22470	COG3835	regulator
BB784_22475	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BB784_22495	COG2860	membrane
BB784_22515	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB784_22520	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BB784_22525	COG1120	ATPase activity
BB784_22530	COG4774	siderophore transport
BB784_22535	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BB784_22630	COG1643	Atp-dependent helicase
BB784_22635	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BB784_22645	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BB784_22655	COG0617	tRNA 3'-terminal CCA addition
BB784_22660	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BB784_22680	COG0726	polysaccharide deacetylase
BB784_22685	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_22690	COG0842	Transport permease protein
BB784_22695	COG1131	(ABC) transporter
BB784_22700	COG0288	reversible hydration of carbon dioxide
BB784_22715	COG4993	Dehydrogenase
BB784_22720	COG2132	Multicopper oxidase
BB784_22765	COG3064	Membrane
BB784_22780	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BB784_22785	COG0508	dehydrogenase complex catalyzes the overall conversion of
BB784_22790	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BB784_22795	COG2186	Transcriptional regulator
BB784_22805	COG1113	amino acid transport
BB784_22810	COG2211	Major facilitator Superfamily
BB784_22815	COG3940	Belongs to the glycosyl hydrolase 43 family
BB784_22825	COG3023	N-Acetylmuramoyl-L-alanine amidase
BB784_22835	COG4969	Belongs to the N-Me-Phe pilin family
BB784_22840	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BB784_22845	COG1459	type II secretion system
BB784_22860	COG0237	dephospho-CoA kinase activity
BB784_22875	COG0494	nUDIX hydrolase
BB784_22895	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BB784_22900	COG0849	cell division
BB784_22910	COG1181	Belongs to the D-alanine--D-alanine ligase family
BB784_22925	COG0772	Belongs to the SEDS family
BB784_22940	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BB784_22945	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BB784_22950	COG0768	penicillin binding
BB784_22975	COG1609	Transcriptional regulator
BB784_22985	COG0028	Belongs to the TPP enzyme family
BB784_23040	COG0738	Major facilitator superfamily
BB784_23050	COG0583	DNA-binding transcription factor activity
BB784_23055	COG2271	Major facilitator Superfamily
BB784_23060	COG2814	Major facilitator Superfamily
BB784_23080	COG4143	(ABC) transporter
BB784_23085	COG1178	ABC-type Fe3 transport system permease component
BB784_23095	COG0586	Pfam SNARE associated Golgi protein
BB784_23120	COG0235	Class ii aldolase
BB784_23125	COG0417	DNA replication proofreading
BB784_23135	COG0564	pseudouridine synthase activity
BB784_23150	COG3493	citrate carrier protein
BB784_23165	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BB784_23170	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BB784_23180	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BB784_23235	COG0505	Belongs to the CarA family
BB784_23310	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BB784_23335	COG1047	Peptidyl-prolyl cis-trans
BB784_23350	COG0196	riboflavin kinase activity
BB784_23370	COG0583	DNA-binding transcription factor activity
BB784_23395	COG4735	regulation of single-species biofilm formation
BB784_23400	COG1584	GPR1 FUN34 yaaH family protein
BB784_23405	COG0477	Major facilitator Superfamily
BB784_23410	COG0521	Mo-molybdopterin cofactor biosynthetic process
BB784_23420	COG1115	amino acid carrier protein
BB784_23435	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BB784_23445	COG0460	homoserine dehydrogenase
BB784_23445	COG0527	aspartate kinase activity
BB784_23460	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BB784_23470	COG0745	RESPONSE REGULATOR receiver
BB784_23475	COG4452	Inner membrane protein CreD
BB784_23480	COG2205	protein histidine kinase activity
BB784_23485	COG0745	RESPONSE REGULATOR receiver
BB784_23490	COG3045	CreA protein
BB784_23495	COG2207	Transcriptional regulator
BB784_23495	COG3708	Transcriptional regulator
BB784_23515	COG0741	lytic transglycosylase activity
BB784_23525	COG0488	(ABC) transporter
BB784_23535	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BB784_23540	COG0560	Phosphoserine phosphatase
BB784_23580	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BB784_23585	COG0084	hydrolase, TatD family'
BB784_23590	COG4667	esterase of the alpha-beta hydrolase superfamily
BB784_23600	COG2823	Periplasmic or secreted lipoprotein
BB784_23610	COG1011	Hydrolase
BB784_23615	COG0456	acetyltransferase
BB784_23620	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
BB784_23655	COG3706	GGDEF domain
BB784_23660	COG4114	ferric iron reductase
BB784_23665	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_23665	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_23670	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BB784_23675	COG2197	response regulator
BB784_23680	COG2197	response regulator
BB784_23700	COG2966	Psort location CytoplasmicMembrane, score
BB784_23715	COG1484	DNA-dependent DNA replication
BB784_23730	COG5464	transposase or invertase
BB784_23740	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BB784_23745	COG3716	PTS system mannose fructose sorbose family IID component
BB784_23750	COG3715	PTS system
BB784_23765	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BB784_23765	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BB784_23770	COG1214	PFAM Peptidase M22, glycoprotease
BB784_23770	COG0456	acetyltransferase
BB784_23780	COG1737	Transcriptional regulator
BB784_23785	COG0800	Aldolase
BB784_23790	COG3734	2-keto-3-deoxy-galactonokinase
BB784_23805	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BB784_23825	COG0531	amino acid
BB784_23830	COG1012	belongs to the aldehyde dehydrogenase family
BB784_23835	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BB784_23850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BB784_23850	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BB784_23865	COG1846	Transcriptional regulator
BB784_23875	COG0179	Fumarylacetoacetate (FAA) hydrolase
BB784_23885	COG1012	belongs to the aldehyde dehydrogenase family
BB784_23890	COG3384	dioxygenase
BB784_23900	COG3971	2-oxopent-4-enoate hydratase activity
BB784_23920	COG2368	4-hydroxyphenylacetate
BB784_23925	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BB784_23940	COG1966	Carbon starvation protein
BB784_23945	COG2879	small protein
BB784_23950	COG0523	cobalamin synthesis protein
BB784_23960	COG1012	belongs to the aldehyde dehydrogenase family
BB784_23965	COG5464	transposase or invertase
BB784_23970	COG1917	Cupin 2, conserved barrel domain protein
BB784_23970	COG2207	Transcriptional regulator
BB784_23980	COG2733	membrane
BB784_23985	COG2814	Major facilitator Superfamily
BB784_23995	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
BB784_24000	COG1924	4 iron, 4 sulfur cluster binding
BB784_24015	COG1566	PFAM secretion protein HlyD family protein
BB784_24025	COG5457	Domain of unknown function (DUF1127)
BB784_24030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB784_24065	COG0583	DNA-binding transcription factor activity
BB784_24070	COG2249	NAD(P)H dehydrogenase (quinone) activity
BB784_24080	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_24085	COG1129	ABC transporter
BB784_24090	COG1879	ABC-type sugar transport system periplasmic component
BB784_24100	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_24105	COG1129	ABC transporter
BB784_24105	COG0842	Transport permease protein
BB784_24110	COG0842	Transport permease protein
BB784_24145	COG2850	peptidyl-arginine hydroxylation
BB784_24160	COG5002	protein histidine kinase activity
BB784_24165	COG0745	RESPONSE REGULATOR receiver
BB784_24175	COG1538	Outer membrane efflux protein
BB784_24180	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_24185	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB784_24190	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB784_24200	COG3040	lipid binding
BB784_24205	COG0789	Transcriptional regulator
BB784_24215	COG0300	oxidoreductase activity
BB784_24230	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BB784_24250	COG3272	Protein of unknown function (DUF1722)
BB784_24255	COG4580	involved in the transport of maltose and maltodextrins
BB784_24265	COG2115	Belongs to the xylose isomerase family
BB784_24270	COG2211	Major facilitator Superfamily
BB784_24275	COG3507	Belongs to the glycosyl hydrolase 43 family
BB784_24320	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BB784_24320	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BB784_24325	COG2801	Transposase and inactivated derivatives
BB784_24330	COG2963	transposase activity
BB784_24380	COG2963	transposase activity
BB784_24385	COG1715	Restriction endonuclease
BB784_24390	COG1196	nuclear chromosome segregation
BB784_24410	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BB784_24415	COG0582	viral genome integration into host DNA
BB784_24430	COG0288	reversible hydration of carbon dioxide
BB784_24435	COG0659	secondary active sulfate transmembrane transporter activity
BB784_24440	COG1064	alcohol dehydrogenase
BB784_24450	COG0395	ABC-type sugar transport system, permease component
BB784_24455	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BB784_24460	COG3842	ATPase activity
BB784_24475	COG1082	Xylose isomerase domain protein TIM barrel
BB784_24485	COG3962	Belongs to the TPP enzyme family
BB784_24495	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB784_24500	COG0837	glucose binding
BB784_24500	COG1737	Transcriptional regulator
BB784_24525	COG3718	enzyme involved in inositol metabolism
BB784_24540	COG0433	COG0433 Predicted ATPase
BB784_24545	COG0795	lipopolysaccharide-transporting ATPase activity
BB784_24550	COG0795	lipopolysaccharide-transporting ATPase activity
BB784_24565	COG2927	DNA polymerase III (CHI subunit)
BB784_24570	COG0525	valine-tRNA ligase activity
BB784_24585	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
BB784_24595	COG2731	YhcH YjgK YiaL family protein
BB784_24635	COG1263	PTS System
BB784_24635	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB784_24640	COG0366	Alpha amylase catalytic
BB784_24645	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB784_24650	COG1486	melibiose metabolic process
BB784_24680	COG0602	queuosine metabolic process
BB784_24685	COG2026	Addiction module toxin, RelE StbE family
BB784_24690	COG3077	Addiction module antitoxin, RelB DinJ family
BB784_24695	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB784_24695	COG3711	transcriptional antiterminator
BB784_24700	COG2706	6-phosphogluconolactonase activity
BB784_24715	COG3964	amidohydrolase
BB784_24745	COG3783	Cytochrome b(562)
BB784_24750	COG0312	modulator of DNA gyrase
BB784_24775	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BB784_24785	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_24790	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_24795	COG1129	ABC transporter
BB784_24805	COG1879	ABC-type sugar transport system periplasmic component
BB784_24810	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BB784_24825	COG2105	PFAM AIG2 family protein
BB784_24830	COG2911	Protein conserved in bacteria
BB784_24835	COG0729	surface antigen
BB784_24845	COG1253	flavin adenine dinucleotide binding
BB784_24860	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BB784_24875	COG1733	regulation of RNA biosynthetic process
BB784_24880	COG0702	epimerase
BB784_24890	COG0697	spore germination
BB784_24900	COG1113	amino acid transport
BB784_24905	COG0545	Peptidyl-prolyl cis-trans isomerase
BB784_24910	COG3061	Opacity-associated protein A
BB784_24925	COG2965	DNA replication, synthesis of RNA primer
BB784_24965	COG3414	Phosphotransferase system galactitol-specific IIB component
BB784_24985	COG1073	alpha beta
BB784_24990	COG3650	response to hydrogen peroxide
BB784_25000	COG1960	acyl-CoA dehydrogenase activity
BB784_25005	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BB784_25010	COG0557	exoribonuclease II activity
BB784_25025	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BB784_25040	COG0330	HflC and HflK could
BB784_25045	COG0330	HflC and HflK could
BB784_25050	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BB784_25070	COG0860	N-Acetylmuramoyl-L-alanine amidase
BB784_25075	COG0802	atpase or kinase
BB784_25080	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BB784_25080	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BB784_25085	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BB784_25110	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB784_25130	COG3264	Mechanosensitive ion channel
BB784_25130	COG1511	domain protein
BB784_25135	COG0531	amino acid
BB784_25145	COG1053	succinate dehydrogenase
BB784_25150	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BB784_25170	COG2076	Multidrug Resistance protein
BB784_25175	COG5510	response to toxic substance
BB784_25190	COG1509	lysine 2,3-aminomutase activity
BB784_25205	COG3121	Chaperone
BB784_25260	COG0531	amino acid
BB784_25265	COG3030	protein affecting phage T7 exclusion by the F plasmid
BB784_25275	COG1027	Aspartate ammonia-lyase
BB784_25280	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BB784_25295	COG1309	transcriptional regulator
BB784_25360	COG0457	Tetratricopeptide repeat
BB784_25365	COG1649	PFAM Uncharacterised BCR, COG1649
BB784_25365	COG0726	polysaccharide deacetylase
BB784_25370	COG1215	transferase activity, transferring glycosyl groups
BB784_25390	COG0861	Integral membrane protein TerC family
BB784_25415	COG2801	Transposase and inactivated derivatives
BB784_25440	COG1486	melibiose metabolic process
BB784_25450	COG2169	Transcriptional regulator
BB784_25465	COG2824	Alkylphosphonate utilization operon protein PhnA
BB784_25470	COG2764	glyoxalase bleomycin resistance protein dioxygenase
BB784_25475	COG2188	Transcriptional regulator
BB784_25480	COG3624	Phosphonate C-P lyase system protein PhnG
BB784_25485	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BB784_25490	COG3626	phosphonate metabolism
BB784_25495	COG3627	carbon phosphorus lyase activity
BB784_25500	COG4107	phosphonate C-P lyase system protein PhnK
BB784_25505	COG4778	phosphonate C-P lyase system protein PhnL
BB784_25510	COG3454	Phosphonate metabolism
BB784_25520	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BB784_25530	COG0784	Response regulator, receiver
BB784_25530	COG4191	Histidine kinase
BB784_25535	COG1129	ABC transporter
BB784_25540	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_25545	COG1879	ABC-type sugar transport system periplasmic component
BB784_25575	COG3383	formate dehydrogenase (NAD+) activity
BB784_25580	COG3383	formate dehydrogenase (NAD+) activity
BB784_25585	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BB784_25590	COG1301	dicarboxylic acid transport
BB784_25600	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BB784_25610	COG3162	membrane
BB784_25640	COG3539	Fimbrial protein
BB784_25650	COG1346	cytolysis
BB784_25655	COG1380	Effector of murein hydrolase LrgA
BB784_25660	COG0583	DNA-binding transcription factor activity
BB784_25665	COG0025	NhaP-type Na H and K H
BB784_25670	COG2252	PERMEase
BB784_25675	COG0625	glutathione transferase activity
BB784_25680	COG0789	Transcriptional regulator
BB784_25690	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BB784_25725	COG1234	tRNA 3'-trailer cleavage
BB784_25730	COG1609	Transcriptional regulator
BB784_25735	COG0483	inositol monophosphate 1-phosphatase activity
BB784_25750	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BB784_25775	COG4771	TonB-dependent receptor
BB784_25785	COG0741	lytic transglycosylase activity
BB784_25795	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BB784_25800	COG2315	Protein conserved in bacteria
BB784_25805	COG0432	Pfam Uncharacterised protein family UPF0047
BB784_25820	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BB784_25825	COG0305	Participates in initiation and elongation during chromosome replication
BB784_25840	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BB784_25855	COG0735	belongs to the Fur family
BB784_25860	COG3237	CsbD-like
BB784_25870	COG0534	Mate efflux family protein
BB784_25880	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BB784_25955	COG0251	oxidation-reduction process
BB784_25965	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BB784_25980	COG0527	aspartate kinase activity
BB784_26035	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BB784_26065	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BB784_26075	COG0456	acetyltransferase
BB784_26115	COG0151	Belongs to the GarS family
BB784_26125	COG4191	Histidine kinase
BB784_26135	COG3678	ATP-independent chaperone mediated protein folding
BB784_26145	COG0776	regulation of translation
BB784_26150	COG3068	Protein conserved in bacteria
BB784_26170	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BB784_26185	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BB784_26190	COG2104	thiamine diphosphate biosynthetic process
BB784_26210	COG3706	GGDEF domain
BB784_26220	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB784_26225	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BB784_26265	COG0250	Participates in transcription elongation, termination and antitermination
BB784_26270	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BB784_26345	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
BB784_26355	COG1739	Uncharacterized protein family UPF0029
BB784_26405	COG0805	protein transport
BB784_26415	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BB784_26425	COG3165	ubiquinone biosynthetic process from chorismate
BB784_26435	COG1322	Protein conserved in bacteria
BB784_26455	COG0583	DNA-binding transcription factor activity
BB784_26465	COG0561	phosphatase activity
BB784_26470	COG2267	carboxylic ester hydrolase activity
BB784_26475	COG1280	lysine exporter protein (LysE YggA)
BB784_26485	COG1280	lysine exporter protein (LysE YggA)
BB784_26500	COG2050	protein possibly involved in aromatic compounds catabolism
BB784_26510	COG0598	Magnesium transport protein CorA
BB784_26515	COG0210	DNA helicase
BB784_26520	COG1011	Hydrolase
BB784_26540	COG5567	small periplasmic lipoprotein
BB784_26550	COG3072	Adenylate cyclase
BB784_26570	COG2959	enzyme of heme biosynthesis
BB784_26575	COG3071	HemY protein
BB784_26605	COG1113	amino acid transport
BB784_26625	COG2244	polysaccharide biosynthetic process
BB784_26630	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BB784_26635	COG0456	acetyltransferase
BB784_26640	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BB784_26645	COG1088	dTDP-glucose 4,6-dehydratase activity
BB784_26650	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BB784_26655	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BB784_26665	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BB784_26670	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BB784_26680	COG3118	belongs to the thioredoxin family
BB784_26710	COG1811	Na channel or pump
BB784_26720	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BB784_26725	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BB784_26735	COG0583	DNA-binding transcription factor activity
BB784_26740	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BB784_26750	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BB784_26755	COG3978	acetolactate synthase activity
BB784_26780	COG3085	chromosome segregation
BB784_26855	COG0583	DNA-binding transcription factor activity
BB784_26880	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BB784_26895	COG3443	Belongs to the bacterial solute-binding protein 9 family
BB784_26900	COG2207	Transcriptional regulator
BB784_26910	COG0371	Dehydrogenase
BB784_26915	COG0697	spore germination
BB784_26925	COG0583	DNA-binding transcription factor activity
BB784_26935	COG0737	Belongs to the 5'-nucleotidase family
BB784_26945	COG0460	homoserine dehydrogenase
BB784_26945	COG0527	aspartate kinase activity
BB784_26950	COG0626	cystathionine gamma-synthase activity
BB784_26965	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BB784_26975	COG1609	Transcriptional regulator
BB784_26980	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BB784_26995	COG1575	Belongs to the MenA family. Type 1 subfamily
BB784_27015	COG3678	ATP-independent chaperone mediated protein folding
BB784_27020	COG0745	RESPONSE REGULATOR receiver
BB784_27025	COG2205	protein histidine kinase activity
BB784_27030	COG2258	MOSC domain
BB784_27035	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BB784_27075	COG1879	ABC-type sugar transport system periplasmic component
BB784_27080	COG1129	ABC transporter
BB784_27085	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_27090	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_27095	COG1454	alcohol dehydrogenase
BB784_27105	COG2211	Major facilitator Superfamily
BB784_27165	COG0205	6-phosphofructokinase activity
BB784_27185	COG3383	formate dehydrogenase (NAD+) activity
BB784_27185	COG0243	molybdopterin cofactor binding
BB784_27190	COG3383	formate dehydrogenase (NAD+) activity
BB784_27190	COG0243	molybdopterin cofactor binding
BB784_27195	COG0437	4 iron, 4 sulfur cluster binding
BB784_27200	COG2864	formate dehydrogenase
BB784_27215	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BB784_27225	COG0456	acetyltransferase
BB784_27240	COG1011	Hydrolase
BB784_27260	COG0174	glutamine synthetase
BB784_27265	COG3852	Histidine kinase
BB784_27275	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BB784_27300	COG0204	Acyl-transferase
BB784_27310	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BB784_27315	COG3084	Protein conserved in bacteria
BB784_27325	COG1763	Mo-molybdopterin cofactor biosynthetic process
BB784_27355	COG2186	Transcriptional regulator
BB784_27360	COG0477	Major facilitator Superfamily
BB784_27365	COG1609	Transcriptional regulator
BB784_27370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB784_27375	COG1879	ABC-type sugar transport system periplasmic component
BB784_27380	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB784_27415	COG1522	sequence-specific DNA binding
BB784_27420	COG0716	FMN binding
BB784_27440	COG3312	ion transport
BB784_27505	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BB784_27510	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BB784_27515	COG0573	inorganic phosphate transmembrane transporter activity
BB784_27520	COG0581	inorganic phosphate transmembrane transporter activity
BB784_27525	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BB784_27530	COG0704	Plays a role in the regulation of phosphate uptake
BB784_27545	COG2382	esterase
BB784_27550	COG0363	glucosamine-6-phosphate deaminase activity
BB784_27555	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB784_27565	COG2252	PERMEase
BB784_27570	COG0431	NADPH-dependent FMN reductase
BB784_27575	COG2091	lysine biosynthetic process via aminoadipic acid
BB784_27595	COG0454	-acetyltransferase
BB784_27635	COG0717	Belongs to the dCTP deaminase family
BB784_27650	COG0582	viral genome integration into host DNA
BB784_27665	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BB784_27880	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BB784_27945	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BB784_27950	COG1193	negative regulation of DNA recombination
BB784_27955	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BB784_27960	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BB784_27965	COG0588	phosphoglycerate mutase activity
BB784_27970	COG0148	phosphopyruvate hydratase activity
BB784_27980	COG1227	inorganic diphosphatase activity
BB784_27985	COG0671	phosphoesterase, PA-phosphatase related
BB784_27990	COG0038	chloride channel
BB784_28005	COG3039	Transposase
BB784_28015	COG0556	nucleotide-excision repair
BB784_28070	COG2916	Histone family protein nucleoid-structuring protein H-NS
BB784_28165	COG1358	cellular component organization or biogenesis
BB784_28185	COG4245	von Willebrand factor, type A
BB784_28195	COG4245	von Willebrand factor, type A
BB784_28200	COG4245	von Willebrand factor, type A
BB784_28220	COG4316	Uncharacterized protein conserved in bacteria (DUF2251)
BB784_28375	COG0210	DNA helicase
BB784_28385	COG2026	Addiction module toxin, RelE StbE family
BB784_28390	COG0675	Transposase, IS605 OrfB family
BB784_28405	COG3677	Transposase
BB784_28410	COG1662	PFAM IS1 transposase
BB784_28440	COG1943	Transposase
BB784_28450	COG0675	Transposase, IS605 OrfB family
BB784_28790	COG0633	Ferredoxin
BB784_29105	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB784_29210	COG1802	Transcriptional regulator
BB784_29210	COG4626	Terminase
BB784_29225	COG0616	signal peptide processing
BB784_29325	COG1192	Involved in chromosome partitioning
BB784_29330	COG1475	DNA binding
BB784_29380	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BB784_29465	COG1192	Involved in chromosome partitioning
BB784_29560	COG3316	Transposase and inactivated derivatives
BB784_29590	COG3316	Transposase and inactivated derivatives
BB784_29600	COG3316	Transposase and inactivated derivatives
BB784_29665	COG0776	regulation of translation
BB784_29715	COG0616	signal peptide processing
BB784_29885	COG4974	Belongs to the 'phage' integrase family
BB784_29975	COG3316	Transposase and inactivated derivatives
BB784_30005	COG3677	Transposase
BB784_30010	COG1662	PFAM IS1 transposase
BB784_30115	COG2801	Transposase and inactivated derivatives
BB784_30175	COG0426	domain, Protein
BB784_30175	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BB784_30190	COG3316	Transposase and inactivated derivatives
BB784_30220	COG1662	PFAM IS1 transposase
BB784_30220	COG3677	Transposase
BB784_30225	COG3677	Transposase
BB784_30235	COG3344	reverse transcriptase
BB784_30340	COG3677	Transposase
BB784_30345	COG1662	PFAM IS1 transposase
BB784_30375	COG0697	spore germination
BB784_30430	COG3316	Transposase and inactivated derivatives
BB784_30445	COG3316	Transposase and inactivated derivatives
BB784_30640	COG2003	Belongs to the UPF0758 family
BB784_30670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BB784_30785	COG0583	DNA-binding transcription factor activity
BB784_30800	COG3677	Transposase
BB784_30805	COG1662	PFAM IS1 transposase