locus-tag class description HCV84_000005 PF11638 DnaA N-terminal domain HCV84_000005 PF08299 Bacterial dnaA protein helix-turn-helix HCV84_000005 PF00308 Bacterial dnaA protein HCV84_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain HCV84_000010 PF02767 DNA polymerase III beta subunit, central domain HCV84_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain HCV84_000015 PF02463 RecF/RecN/SMC N terminal domain HCV84_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_000020 PF00986 DNA gyrase B subunit, carboxyl terminus HCV84_000020 PF00204 DNA gyrase B HCV84_000020 PF01751 Toprim domain HCV84_000020 PF18053 DNA gyrase B subunit insert domain HCV84_000040 PF00392 Bacterial regulatory proteins, gntR family HCV84_000040 PF07729 FCD domain HCV84_000045 PF05035 2-keto-3-deoxy-galactonokinase HCV84_000050 PF01081 KDPG and KHG aldolase HCV84_000055 PF13378 Enolase C-terminal domain-like HCV84_000055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV84_000060 PF07690 Major Facilitator Superfamily HCV84_000065 PF12566 Protein of unknown function (DUF3748) HCV84_000065 PF07676 WD40-like Beta Propeller Repeat HCV84_000070 PF07119 Protein of unknown function (DUF1375) HCV84_000075 PF00011 Hsp20/alpha crystallin family HCV84_000080 PF00011 Hsp20/alpha crystallin family HCV84_000090 PF02080 TrkA-C domain HCV84_000090 PF06826 Predicted Permease Membrane Region HCV84_000095 PF00392 Bacterial regulatory proteins, gntR family HCV84_000095 PF07702 UTRA domain HCV84_000100 PF02378 Phosphotransferase system, EIIC HCV84_000100 PF00367 phosphotransferase system, EIIB HCV84_000105 PF02056 Family 4 glycosyl hydrolase HCV84_000105 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV84_000110 PF02656 Domain of unknown function (DUF202) HCV84_000115 PF02656 Domain of unknown function (DUF202) HCV84_000125 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_000130 PF02447 GntP family permease HCV84_000140 PF03466 LysR substrate binding domain HCV84_000140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_000145 PF07690 Major Facilitator Superfamily HCV84_000175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_000175 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_000175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_000180 PF01842 ACT domain HCV84_000185 PF00072 Response regulator receiver domain HCV84_000185 PF00196 Bacterial regulatory proteins, luxR family HCV84_000190 PF07730 Histidine kinase HCV84_000190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_000190 PF05231 MASE1 HCV84_000195 PF07690 Major Facilitator Superfamily HCV84_000200 PF07690 Major Facilitator Superfamily HCV84_000205 PF06711 Protein of unknown function (DUF1198) HCV84_000220 PF07690 Major Facilitator Superfamily HCV84_000230 PF00266 Aminotransferase class-V HCV84_000235 PF07702 UTRA domain HCV84_000235 PF00392 Bacterial regulatory proteins, gntR family HCV84_000240 PF01547 Bacterial extracellular solute-binding protein HCV84_000245 PF00005 ABC transporter HCV84_000245 PF08402 TOBE domain HCV84_000250 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_000255 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_000260 PF02264 LamB porin HCV84_000265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV84_000270 PF02378 Phosphotransferase system, EIIC HCV84_000270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_000275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_000280 PF00356 Bacterial regulatory proteins, lacI family HCV84_000285 PF07690 Major Facilitator Superfamily HCV84_000295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_000295 PF03466 LysR substrate binding domain HCV84_000300 PF02585 GlcNAc-PI de-N-acetylase HCV84_000305 PF03737 Aldolase/RraA HCV84_000310 PF04303 PrpF protein HCV84_000325 PF00892 EamA-like transporter family HCV84_000330 PF00367 phosphotransferase system, EIIB HCV84_000330 PF02378 Phosphotransferase system, EIIC HCV84_000335 PF13580 SIS domain HCV84_000340 PF07690 Major Facilitator Superfamily HCV84_000345 PF02321 Outer membrane efflux protein HCV84_000350 PF00873 AcrB/AcrD/AcrF family HCV84_000355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_000355 PF00529 HlyD membrane-fusion protein of T1SS HCV84_000370 PF00583 Acetyltransferase (GNAT) family HCV84_000375 PF00440 Bacterial regulatory proteins, tetR family HCV84_000380 PF07690 Major Facilitator Superfamily HCV84_000385 PF03466 LysR substrate binding domain HCV84_000385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_000410 PF03180 NLPA lipoprotein HCV84_000420 PF00293 NUDIX domain HCV84_000425 PF12706 Beta-lactamase superfamily domain HCV84_000430 PF01965 DJ-1/PfpI family HCV84_000435 PF00107 Zinc-binding dehydrogenase HCV84_000435 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_000450 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_000450 PF00107 Zinc-binding dehydrogenase HCV84_000470 PF13802 Galactose mutarotase-like HCV84_000470 PF01055 Glycosyl hydrolases family 31 HCV84_000480 PF02056 Family 4 glycosyl hydrolase HCV84_000480 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV84_000485 PF00367 phosphotransferase system, EIIB HCV84_000485 PF02378 Phosphotransferase system, EIIC HCV84_000490 PF05170 AsmA family HCV84_000495 PF00860 Permease family HCV84_000500 PF03616 Sodium/glutamate symporter HCV84_000505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_000505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_000510 PF00230 Major intrinsic protein HCV84_000515 PF06005 Cell division protein ZapB HCV84_000525 PF02611 CDP-diacylglycerol pyrophosphatase HCV84_000535 PF00121 Triosephosphate isomerase HCV84_000540 PF07305 Protein of unknown function (DUF1454) HCV84_000545 PF05656 Protein of unknown function (DUF805) HCV84_000550 PF00970 Oxidoreductase FAD-binding domain HCV84_000550 PF00175 Oxidoreductase NAD-binding domain HCV84_000555 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HCV84_000560 PF00270 DEAD/DEAH box helicase HCV84_000560 PF00271 Helicase conserved C-terminal domain HCV84_000560 PF17191 RecG wedge domain HCV84_000565 PF12105 SpoU, rRNA methylase, C-terminal HCV84_000565 PF00588 SpoU rRNA Methylase family HCV84_000570 PF13291 ACT domain HCV84_000570 PF02824 TGS domain HCV84_000570 PF04607 Region found in RelA / SpoT proteins HCV84_000575 PF01192 RNA polymerase Rpb6 HCV84_000580 PF00625 Guanylate kinase HCV84_000585 PF01653 NAD-dependent DNA ligase adenylation domain HCV84_000585 PF03120 NAD-dependent DNA ligase OB-fold domain HCV84_000590 PF03458 UPF0126 domain HCV84_000600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV84_000600 PF12833 Helix-turn-helix domain HCV84_000600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCV84_000600 PF02805 Metal binding domain of Ada HCV84_000610 PF03755 YicC-like family, N-terminal region HCV84_000610 PF08340 Domain of unknown function (DUF1732) HCV84_000630 PF00005 ABC transporter HCV84_000640 PF01138 3' exoribonuclease family, domain 1 HCV84_000640 PF03725 3' exoribonuclease family, domain 2 HCV84_000645 PF00156 Phosphoribosyl transferase domain HCV84_000655 PF00440 Bacterial regulatory proteins, tetR family HCV84_000660 PF00692 dUTPase HCV84_000665 PF02441 Flavoprotein HCV84_000665 PF04127 DNA / pantothenate metabolism flavoprotein HCV84_000670 PF04002 RadC-like JAB domain HCV84_000675 PF00830 Ribosomal L28 family HCV84_000680 PF00471 Ribosomal protein L33 HCV84_000685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HCV84_000685 PF06827 Zinc finger found in FPG and IleRS HCV84_000685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HCV84_000690 PF01467 Cytidylyltransferase-like HCV84_000695 PF00535 Glycosyl transferase family 2 HCV84_000700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HCV84_000705 PF00535 Glycosyl transferase family 2 HCV84_000710 PF00534 Glycosyl transferases group 1 HCV84_000710 PF13439 Glycosyltransferase Family 4 HCV84_000715 PF00534 Glycosyl transferases group 1 HCV84_000715 PF13439 Glycosyltransferase Family 4 HCV84_000720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV84_000735 PF04932 O-Antigen ligase HCV84_000745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV84_000750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV84_000755 PF01370 NAD dependent epimerase/dehydratase family HCV84_000760 PF00155 Aminotransferase class I and II HCV84_000765 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_000765 PF00107 Zinc-binding dehydrogenase HCV84_000770 PF00535 Glycosyl transferase family 2 HCV84_000775 PF04748 Divergent polysaccharide deacetylase HCV84_000780 PF01551 Peptidase family M23 HCV84_000785 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HCV84_000785 PF01676 Metalloenzyme superfamily HCV84_000790 PF00581 Rhodanese-like domain HCV84_000795 PF00462 Glutaredoxin HCV84_000800 PF02556 Preprotein translocase subunit SecB HCV84_000805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HCV84_000805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HCV84_000810 PF06426 Serine acetyltransferase, N-terminal HCV84_000810 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_000815 PF00588 SpoU rRNA Methylase family HCV84_000820 PF01070 FMN-dependent dehydrogenase HCV84_000825 PF00392 Bacterial regulatory proteins, gntR family HCV84_000825 PF07729 FCD domain HCV84_000830 PF02652 L-lactate permease HCV84_000835 PF10928 Protein of unknown function (DUF2810) HCV84_000845 PF05068 Mannitol repressor HCV84_000850 PF08125 Mannitol dehydrogenase C-terminal domain HCV84_000850 PF01232 Mannitol dehydrogenase Rossmann domain HCV84_000855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_000855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_000855 PF02378 Phosphotransferase system, EIIC HCV84_000865 PF00043 Glutathione S-transferase, C-terminal domain HCV84_000865 PF13417 Glutathione S-transferase, N-terminal domain HCV84_000870 PF12390 Selenocysteine synthase N terminal HCV84_000870 PF03841 L-seryl-tRNA selenium transferase HCV84_000875 PF09106 Elongation factor SelB, winged helix HCV84_000875 PF00009 Elongation factor Tu GTP binding domain HCV84_000875 PF03144 Elongation factor Tu domain 2 HCV84_000875 PF09107 Elongation factor SelB, winged helix HCV84_000880 PF01614 Bacterial transcriptional regulator HCV84_000880 PF09339 IclR helix-turn-helix domain HCV84_000885 PF12800 4Fe-4S binding domain HCV84_000885 PF13247 4Fe-4S dicluster domain HCV84_000890 PF00155 Aminotransferase class I and II HCV84_000895 PF00128 Alpha amylase, catalytic domain HCV84_000900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HCV84_000905 PF12833 Helix-turn-helix domain HCV84_000910 PF02653 Branched-chain amino acid transport system / permease component HCV84_000915 PF00005 ABC transporter HCV84_000920 PF13407 Periplasmic binding protein domain HCV84_000930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_000930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_000935 PF05360 yiaA/B two helix domain HCV84_000940 PF05360 yiaA/B two helix domain HCV84_000945 PF01757 Acyltransferase family HCV84_000950 PF13983 YsaB-like lipoprotein HCV84_000955 PF02091 Glycyl-tRNA synthetase alpha subunit HCV84_000960 PF05746 DALR anticodon binding domain HCV84_000960 PF02092 Glycyl-tRNA synthetase beta subunit HCV84_000965 PF01848 Hok/gef family HCV84_000970 PF00005 ABC transporter HCV84_000970 PF12848 ABC transporter HCV84_000975 PF00313 'Cold-shock' DNA-binding domain HCV84_000980 PF01381 Helix-turn-helix HCV84_000985 PF07690 Major Facilitator Superfamily HCV84_000990 PF11254 Protein of unknown function (DUF3053) HCV84_000995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_000995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_001000 PF07690 Major Facilitator Superfamily HCV84_001005 PF00294 pfkB family carbohydrate kinase HCV84_001015 PF00356 Bacterial regulatory proteins, lacI family HCV84_001020 PF13488 Glycine zipper HCV84_001020 PF00691 OmpA family HCV84_001025 PF01568 Molydopterin dinucleotide binding domain HCV84_001025 PF00384 Molybdopterin oxidoreductase HCV84_001025 PF18364 Molybdopterin oxidoreductase N-terminal domain HCV84_001030 PF00583 Acetyltransferase (GNAT) family HCV84_001035 PF03352 Methyladenine glycosylase HCV84_001040 PF03797 Autotransporter beta-domain HCV84_001045 PF07690 Major Facilitator Superfamily HCV84_001050 PF08019 Phosphoethanolamine transferase EptA/EptB HCV84_001050 PF00884 Sulfatase HCV84_001065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_001070 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_001075 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_001075 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_001080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_001080 PF00005 ABC transporter HCV84_001085 PF00005 ABC transporter HCV84_001085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_001100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HCV84_001105 PF03552 Cellulose synthase HCV84_001105 PF00535 Glycosyl transferase family 2 HCV84_001105 PF07238 PilZ domain HCV84_001105 PF03170 Bacterial cellulose synthase subunit HCV84_001110 PF03170 Bacterial cellulose synthase subunit HCV84_001115 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HCV84_001125 PF01270 Glycosyl hydrolases family 8 HCV84_001130 PF11658 Cellulose biosynthesis protein BcsG HCV84_001135 PF11120 Cellulose biosynthesis protein BcsF HCV84_001140 PF10995 Cellulose biosynthesis GIL HCV84_001145 PF10945 Cellulose biosynthesis protein BcsR HCV84_001150 PF06564 Cellulose biosynthesis protein BcsQ HCV84_001155 PF07238 PilZ domain HCV84_001155 PF00535 Glycosyl transferase family 2 HCV84_001160 PF03170 Bacterial cellulose synthase subunit HCV84_001165 PF01270 Glycosyl hydrolases family 8 HCV84_001170 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HCV84_001175 PF17154 Gammaproteobacterial periplasmic sensor domain HCV84_001175 PF00563 EAL domain HCV84_001175 PF00672 HAMP domain HCV84_001175 PF00990 Diguanylate cyclase, GGDEF domain HCV84_001180 PF00375 Sodium:dicarboxylate symporter family HCV84_001185 PF05193 Peptidase M16 inactive domain HCV84_001185 PF00675 Insulinase (Peptidase family M16) HCV84_001190 PF00294 pfkB family carbohydrate kinase HCV84_001195 PF05170 AsmA family HCV84_001200 PF07690 Major Facilitator Superfamily HCV84_001200 PF00083 Sugar (and other) transporter HCV84_001205 PF03631 Virulence factor BrkB HCV84_001210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_001210 PF03466 LysR substrate binding domain HCV84_001220 PF13302 Acetyltransferase (GNAT) domain HCV84_001225 PF01204 Trehalase HCV84_001230 PF00465 Iron-containing alcohol dehydrogenase HCV84_001240 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_001240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV84_001245 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HCV84_001250 PF01569 PAP2 superfamily HCV84_001255 PF01432 Peptidase family M3 HCV84_001260 PF04445 Putative SAM-dependent methyltransferase HCV84_001265 PF00854 POT family HCV84_001270 PF00582 Universal stress protein family HCV84_001275 PF10625 Universal stress protein B (UspB) HCV84_001280 PF01384 Phosphate transporter family HCV84_001290 PF01769 Divalent cation transporter HCV84_001290 PF03448 MgtE intracellular N domain HCV84_001290 PF00571 CBS domain HCV84_001300 PF01402 Ribbon-helix-helix protein, copG family HCV84_001300 PF08753 NikR C terminal nickel binding domain HCV84_001305 PF00005 ABC transporter HCV84_001310 PF00005 ABC transporter HCV84_001315 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_001320 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_001325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_001330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_001330 PF03466 LysR substrate binding domain HCV84_001335 PF05870 Phenolic acid decarboxylase (PAD) HCV84_001340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCV84_001345 PF00535 Glycosyl transferase family 2 HCV84_001350 PF00551 Formyl transferase HCV84_001350 PF02911 Formyl transferase, C-terminal domain HCV84_001350 PF01370 NAD dependent epimerase/dehydratase family HCV84_001355 PF01522 Polysaccharide deacetylase HCV84_001360 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HCV84_001365 PF00892 EamA-like transporter family HCV84_001375 PF01594 AI-2E family transporter HCV84_001380 PF07690 Major Facilitator Superfamily HCV84_001385 PF08786 DcrB HCV84_001390 PF02592 Putative vitamin uptake transporter HCV84_001395 PF01206 Sulfurtransferase TusA HCV84_001400 PF00403 Heavy-metal-associated domain HCV84_001405 PF07947 YhhN family HCV84_001410 PF10694 Protein of unknown function (DUF2500) HCV84_001415 PF06611 Protein of unknown function (DUF1145) HCV84_001425 PF00448 SRP54-type protein, GTPase domain HCV84_001425 PF02881 SRP54-type protein, helical bundle domain HCV84_001430 PF00005 ABC transporter HCV84_001435 PF18075 FtsX extracellular domain HCV84_001435 PF02687 FtsX-like permease family HCV84_001440 PF04545 Sigma-70, region 4 HCV84_001440 PF04542 Sigma-70 region 2 HCV84_001445 PF00392 Bacterial regulatory proteins, gntR family HCV84_001445 PF00155 Aminotransferase class I and II HCV84_001450 PF00202 Aminotransferase class-III HCV84_001460 PF13458 Periplasmic binding protein HCV84_001465 PF12568 Acetyltransferase (GNAT) domain, PanZ HCV84_001470 PF13458 Periplasmic binding protein HCV84_001475 PF02653 Branched-chain amino acid transport system / permease component HCV84_001480 PF11862 Domain of unknown function (DUF3382) HCV84_001480 PF02653 Branched-chain amino acid transport system / permease component HCV84_001485 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV84_001485 PF00005 ABC transporter HCV84_001490 PF00005 ABC transporter HCV84_001495 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HCV84_001505 PF13416 Bacterial extracellular solute-binding protein HCV84_001510 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_001515 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_001520 PF17912 MalK OB fold domain HCV84_001520 PF00005 ABC transporter HCV84_001525 PF03009 Glycerophosphoryl diester phosphodiesterase family HCV84_001530 PF10956 Protein of unknown function (DUF2756) HCV84_001540 PF00583 Acetyltransferase (GNAT) family HCV84_001550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_001550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_001555 PF02678 Pirin HCV84_001555 PF17954 Quercetinase C-terminal cupin domain HCV84_001560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV84_001560 PF00356 Bacterial regulatory proteins, lacI family HCV84_001565 PF01202 Shikimate kinase HCV84_001570 PF02447 GntP family permease HCV84_001580 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV84_001580 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV84_001585 PF00128 Alpha amylase, catalytic domain HCV84_001585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV84_001585 PF02806 Alpha amylase, C-terminal all-beta domain HCV84_001590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV84_001590 PF00128 Alpha amylase, catalytic domain HCV84_001590 PF18390 Glycogen debranching enzyme C-terminal domain HCV84_001595 PF00483 Nucleotidyl transferase HCV84_001600 PF00534 Glycosyl transferases group 1 HCV84_001600 PF08323 Starch synthase catalytic domain HCV84_001605 PF00343 Carbohydrate phosphorylase HCV84_001610 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HCV84_001610 PF01266 FAD dependent oxidoreductase HCV84_001615 PF00581 Rhodanese-like domain HCV84_001620 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HCV84_001620 PF01694 Rhomboid family HCV84_001625 PF08220 DeoR-like helix-turn-helix domain HCV84_001625 PF00455 DeoR C terminal sensor domain HCV84_001630 PF00196 Bacterial regulatory proteins, luxR family HCV84_001630 PF17874 MalT-like TPR region HCV84_001635 PF00343 Carbohydrate phosphorylase HCV84_001640 PF02446 4-alpha-glucanotransferase HCV84_001645 PF02447 GntP family permease HCV84_001650 PF01521 Iron-sulphur cluster biosynthesis HCV84_001650 PF01106 NifU-like domain HCV84_001655 PF00156 Phosphoribosyl transferase domain HCV84_001660 PF00561 alpha/beta hydrolase fold HCV84_001670 PF09012 FeoC like transcriptional regulator HCV84_001675 PF07670 Nucleoside recognition HCV84_001675 PF17910 FeoB cytosolic helical domain HCV84_001675 PF07664 Ferrous iron transport protein B C terminus HCV84_001675 PF02421 Ferrous iron transport protein B HCV84_001680 PF04023 FeoA domain HCV84_001685 PF17674 HHH domain HCV84_001685 PF16921 Tex protein YqgF-like domain HCV84_001685 PF09371 Tex-like protein N-terminal domain HCV84_001685 PF00575 S1 RNA binding domain HCV84_001690 PF01272 Transcription elongation factor, GreA/GreB, C-term HCV84_001690 PF03449 Transcription elongation factor, N-terminal HCV84_001695 PF00072 Response regulator receiver domain HCV84_001695 PF00486 Transcriptional regulatory protein, C terminal HCV84_001700 PF00672 HAMP domain HCV84_001700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_001700 PF00512 His Kinase A (phospho-acceptor) domain HCV84_001705 PF01293 Phosphoenolpyruvate carboxykinase HCV84_001710 PF01430 Hsp33 protein HCV84_001715 PF01479 S4 domain HCV84_001720 PF13419 Haloacid dehalogenase-like hydrolase HCV84_001725 PF07095 Intracellular growth attenuator protein IgaA HCV84_001730 PF00293 NUDIX domain HCV84_001735 PF00905 Penicillin binding protein transpeptidase domain HCV84_001735 PF00912 Transglycosylase HCV84_001735 PF17092 Penicillin-binding protein OB-like domain HCV84_001760 PF00263 Bacterial type II and III secretion system protein HCV84_001760 PF03958 Bacterial type II/III secretion system short domain HCV84_001765 PF01202 Shikimate kinase HCV84_001770 PF01761 3-dehydroquinate synthase HCV84_001775 PF05036 Sporulation related domain HCV84_001780 PF02086 D12 class N6 adenine-specific DNA methyltransferase HCV84_001785 PF00834 Ribulose-phosphate 3 epimerase family HCV84_001790 PF13419 Haloacid dehalogenase-like hydrolase HCV84_001795 PF00579 tRNA synthetases class I (W and Y) HCV84_001800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV84_001800 PF14824 Sirohaem biosynthesis protein central HCV84_001800 PF10414 Sirohaem synthase dimerisation region HCV84_001805 PF13806 Rieske-like [2Fe-2S] domain HCV84_001810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCV84_001810 PF04324 BFD-like [2Fe-2S] binding domain HCV84_001810 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_001810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCV84_001810 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCV84_001815 PF07969 Amidohydrolase family HCV84_001820 PF07690 Major Facilitator Superfamily HCV84_001825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HCV84_001830 PF10832 Protein of unknown function (DUF2559) HCV84_001835 PF02661 Fic/DOC family HCV84_001840 PF00117 Glutamine amidotransferase class-I HCV84_001845 PF00202 Aminotransferase class-III HCV84_001850 PF12805 FUSC-like inner membrane protein yccS HCV84_001855 PF00027 Cyclic nucleotide-binding domain HCV84_001855 PF13545 Crp-like helix-turn-helix domain HCV84_001860 PF02566 OsmC-like protein HCV84_001865 PF00485 Phosphoribulokinase / Uridine kinase family HCV84_001870 PF06794 Uncharacterised protein family (UPF0270) HCV84_001875 PF00561 alpha/beta hydrolase fold HCV84_001880 PF12848 ABC transporter HCV84_001880 PF00005 ABC transporter HCV84_001885 PF02525 Flavodoxin-like fold HCV84_001890 PF02254 TrkA-N domain HCV84_001890 PF00999 Sodium/hydrogen exchanger family HCV84_001895 PF09526 Probable metal-binding protein (DUF2387) HCV84_001900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV84_001905 PF04102 SlyX HCV84_001910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HCV84_001910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV84_001915 PF13309 HTH domain HCV84_001915 PF08348 YheO-like PAS domain HCV84_001920 PF02635 DsrE/DsrF-like family HCV84_001925 PF02635 DsrE/DsrF-like family HCV84_001930 PF04077 DsrH like protein HCV84_001935 PF00164 Ribosomal protein S12/S23 HCV84_001940 PF00177 Ribosomal protein S7p/S5e HCV84_001945 PF03144 Elongation factor Tu domain 2 HCV84_001945 PF00009 Elongation factor Tu GTP binding domain HCV84_001945 PF03764 Elongation factor G, domain IV HCV84_001945 PF00679 Elongation factor G C-terminus HCV84_001945 PF14492 Elongation Factor G, domain II HCV84_001950 PF03143 Elongation factor Tu C-terminal domain HCV84_001950 PF03144 Elongation factor Tu domain 2 HCV84_001950 PF00009 Elongation factor Tu GTP binding domain HCV84_001955 PF04324 BFD-like [2Fe-2S] binding domain HCV84_001960 PF00210 Ferritin-like domain HCV84_001965 PF01478 Type IV leader peptidase family HCV84_001970 PF00338 Ribosomal protein S10p/S20e HCV84_001975 PF00297 Ribosomal protein L3 HCV84_001980 PF00573 Ribosomal protein L4/L1 family HCV84_001985 PF00276 Ribosomal protein L23 HCV84_001990 PF03947 Ribosomal Proteins L2, C-terminal domain HCV84_001990 PF00181 Ribosomal Proteins L2, RNA binding domain HCV84_001995 PF00203 Ribosomal protein S19 HCV84_002000 PF00237 Ribosomal protein L22p/L17e HCV84_002005 PF07650 KH domain HCV84_002005 PF00189 Ribosomal protein S3, C-terminal domain HCV84_002010 PF00252 Ribosomal protein L16p/L10e HCV84_002015 PF00831 Ribosomal L29 protein HCV84_002020 PF00366 Ribosomal protein S17 HCV84_002025 PF00238 Ribosomal protein L14p/L23e HCV84_002030 PF00467 KOW motif HCV84_002030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HCV84_002035 PF00673 ribosomal L5P family C-terminus HCV84_002035 PF00281 Ribosomal protein L5 HCV84_002040 PF00253 Ribosomal protein S14p/S29e HCV84_002045 PF00410 Ribosomal protein S8 HCV84_002050 PF00347 Ribosomal protein L6 HCV84_002055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HCV84_002060 PF00333 Ribosomal protein S5, N-terminal domain HCV84_002060 PF03719 Ribosomal protein S5, C-terminal domain HCV84_002065 PF00327 Ribosomal protein L30p/L7e HCV84_002070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HCV84_002075 PF00344 SecY translocase HCV84_002080 PF00444 Ribosomal protein L36 HCV84_002085 PF00416 Ribosomal protein S13/S18 HCV84_002090 PF00411 Ribosomal protein S11 HCV84_002095 PF01479 S4 domain HCV84_002095 PF00163 Ribosomal protein S4/S9 N-terminal domain HCV84_002100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HCV84_002100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HCV84_002100 PF01000 RNA polymerase Rpb3/RpoA insert domain HCV84_002105 PF01196 Ribosomal protein L17 HCV84_002110 PF09350 Domain of unknown function (DUF1992) HCV84_002115 PF13411 MerR HTH family regulatory protein HCV84_002120 PF03889 Alternative ribosome-rescue factor A HCV84_002125 PF01741 Large-conductance mechanosensitive channel, MscL HCV84_002130 PF02254 TrkA-N domain HCV84_002130 PF02080 TrkA-C domain HCV84_002135 PF01189 16S rRNA methyltransferase RsmB/F HCV84_002135 PF01029 NusB family HCV84_002140 PF02911 Formyl transferase, C-terminal domain HCV84_002140 PF00551 Formyl transferase HCV84_002145 PF01327 Polypeptide deformylase HCV84_002150 PF17782 DprA winged helix domain HCV84_002150 PF02481 DNA recombination-mediator protein A HCV84_002155 PF04361 Protein of unknown function (DUF494) HCV84_002160 PF01396 Topoisomerase DNA binding C4 zinc finger HCV84_002165 PF01300 Telomere recombination HCV84_002170 PF08501 Shikimate dehydrogenase substrate binding domain HCV84_002170 PF01488 Shikimate / quinate 5-dehydrogenase HCV84_002170 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV84_002175 PF07369 Protein of unknown function (DUF1488) HCV84_002180 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_002220 PF00873 AcrB/AcrD/AcrF family HCV84_002225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_002225 PF00529 HlyD membrane-fusion protein of T1SS HCV84_002230 PF08361 MAATS-type transcriptional repressor, C-terminal region HCV84_002230 PF00440 Bacterial regulatory proteins, tetR family HCV84_002235 PF02954 Bacterial regulatory protein, Fis family HCV84_002240 PF01207 Dihydrouridine synthase (Dus) HCV84_002250 PF00474 Sodium:solute symporter family HCV84_002255 PF06196 Protein of unknown function (DUF997) HCV84_002260 PF00289 Biotin carboxylase, N-terminal domain HCV84_002260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCV84_002260 PF02785 Biotin carboxylase C-terminal domain HCV84_002265 PF00364 Biotin-requiring enzyme HCV84_002270 PF01220 Dehydroquinase class II HCV84_002275 PF01794 Ferric reductase like transmembrane component HCV84_002280 PF00174 Oxidoreductase molybdopterin binding domain HCV84_002290 PF00990 Diguanylate cyclase, GGDEF domain HCV84_002290 PF00563 EAL domain HCV84_002290 PF17157 Gammaproteobacterial periplasmic sensor domain HCV84_002300 PF04085 rod shape-determining protein MreC HCV84_002305 PF04093 rod shape-determining protein MreD HCV84_002310 PF02545 Maf-like protein HCV84_002315 PF10150 Ribonuclease E/G family HCV84_002315 PF00575 S1 RNA binding domain HCV84_002320 PF13116 Protein of unknown function HCV84_002320 PF13502 AsmA-like C-terminal region HCV84_002325 PF01523 Putative modulator of DNA gyrase HCV84_002330 PF03466 LysR substrate binding domain HCV84_002330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_002335 PF07869 Protein of unknown function (DUF1656) HCV84_002340 PF13533 Biotin-lipoyl like HCV84_002345 PF04632 Fusaric acid resistance protein family HCV84_002350 PF01337 Barstar (barnase inhibitor) HCV84_002355 PF07338 Protein of unknown function (DUF1471) HCV84_002360 PF07338 Protein of unknown function (DUF1471) HCV84_002365 PF02863 Arginine repressor, C-terminal domain HCV84_002365 PF01316 Arginine repressor, DNA binding domain HCV84_002370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCV84_002370 PF00056 lactate/malate dehydrogenase, NAD binding domain HCV84_002375 PF00392 Bacterial regulatory proteins, gntR family HCV84_002385 PF00939 Sodium:sulfate symporter transmembrane region HCV84_002390 PF05681 Fumarate hydratase (Fumerase) HCV84_002395 PF05683 Fumarase C-terminus HCV84_002400 PF04277 Oxaloacetate decarboxylase, gamma chain HCV84_002405 PF00682 HMGL-like HCV84_002405 PF00364 Biotin-requiring enzyme HCV84_002405 PF02436 Conserved carboxylase domain HCV84_002410 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HCV84_002415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HCV84_002420 PF13180 PDZ domain HCV84_002425 PF13180 PDZ domain HCV84_002425 PF00595 PDZ domain HCV84_002430 PF06295 Protein of unknown function (DUF1043) HCV84_002435 PF03969 AFG1-like ATPase HCV84_002440 PF00572 Ribosomal protein L13 HCV84_002445 PF00380 Ribosomal protein S9/S16 HCV84_002455 PF02798 Glutathione S-transferase, N-terminal domain HCV84_002455 PF00043 Glutathione S-transferase, C-terminal domain HCV84_002460 PF04386 Stringent starvation protein B HCV84_002465 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HCV84_002470 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_002470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HCV84_002475 PF00310 Glutamine amidotransferases class-II HCV84_002475 PF01645 Conserved region in glutamate synthase HCV84_002475 PF04898 Glutamate synthase central domain HCV84_002475 PF01493 GXGXG motif HCV84_002480 PF16199 Radical_SAM C-terminal domain HCV84_002480 PF04055 Radical SAM superfamily HCV84_002485 PF07690 Major Facilitator Superfamily HCV84_002490 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_002490 PF00107 Zinc-binding dehydrogenase HCV84_002495 PF03786 D-mannonate dehydratase (UxuA) HCV84_002500 PF01627 Hpt domain HCV84_002500 PF00072 Response regulator receiver domain HCV84_002500 PF00989 PAS fold HCV84_002500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_002500 PF00512 His Kinase A (phospho-acceptor) domain HCV84_002500 PF18415 Histidine kinase receptor ArcB trans-membrane domain HCV84_002510 PF00912 Transglycosylase HCV84_002515 PF00381 PTS HPr component phosphorylation site HCV84_002520 PF03668 P-loop ATPase protein family HCV84_002525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_002530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HCV84_002535 PF00309 Sigma-54 factor, Activator interacting domain (AID) HCV84_002535 PF04552 Sigma-54, DNA binding domain HCV84_002535 PF04963 Sigma-54 factor, core binding domain HCV84_002540 PF00005 ABC transporter HCV84_002540 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV84_002545 PF03968 OstA-like protein HCV84_002550 PF06835 Lipopolysaccharide-assembly, LptC-related HCV84_002560 PF00571 CBS domain HCV84_002560 PF01380 SIS domain HCV84_002565 PF01699 Sodium/calcium exchanger protein HCV84_002570 PF00005 ABC transporter HCV84_002575 PF02405 Permease MlaE HCV84_002580 PF02470 MlaD protein HCV84_002585 PF05494 MlaC protein HCV84_002590 PF13466 STAS domain HCV84_002595 PF01722 BolA-like protein HCV84_002600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCV84_002605 PF13693 Winged helix-turn-helix DNA-binding HCV84_002610 PF00348 Polyprenyl synthetase HCV84_002615 PF00829 Ribosomal prokaryotic L21 protein HCV84_002620 PF01016 Ribosomal L27 protein HCV84_002625 PF00892 EamA-like transporter family HCV84_002630 PF01018 GTP1/OBG HCV84_002630 PF01926 50S ribosome-binding GTPase HCV84_002635 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HCV84_002640 PF03449 Transcription elongation factor, N-terminal HCV84_002640 PF01272 Transcription elongation factor, GreA/GreB, C-term HCV84_002645 PF01985 CRS1 / YhbY (CRM) domain HCV84_002650 PF01728 FtsJ-like methyltransferase HCV84_002655 PF17862 AAA+ lid domain HCV84_002655 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_002655 PF06480 FtsH Extracellular HCV84_002655 PF01434 Peptidase family M41 HCV84_002660 PF00809 Pterin binding enzyme HCV84_002665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCV84_002665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCV84_002665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCV84_002665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCV84_002670 PF03840 Preprotein translocase SecG subunit HCV84_002685 PF07437 YfaZ precursor HCV84_002690 PF15977 Winged helix-turn-helix DNA binding HCV84_002695 PF00764 Arginosuccinate synthase HCV84_002705 PF17384 RimP C-terminal SH3 domain HCV84_002705 PF02576 RimP N-terminal domain HCV84_002710 PF00575 S1 RNA binding domain HCV84_002710 PF08529 NusA N-terminal domain HCV84_002710 PF13184 NusA-like KH domain HCV84_002715 PF00009 Elongation factor Tu GTP binding domain HCV84_002715 PF11987 Translation-initiation factor 2 HCV84_002715 PF08364 Bacterial translation initiation factor IF-2 associated region HCV84_002715 PF04760 Translation initiation factor IF-2, N-terminal region HCV84_002720 PF02033 Ribosome-binding factor A HCV84_002725 PF09157 Pseudouridine synthase II TruB, C-terminal HCV84_002725 PF01509 TruB family pseudouridylate synthase (N terminal domain) HCV84_002725 PF16198 tRNA pseudouridylate synthase B C-terminal domain HCV84_002730 PF00312 Ribosomal protein S15 HCV84_002735 PF00013 KH domain HCV84_002735 PF01138 3' exoribonuclease family, domain 1 HCV84_002735 PF03725 3' exoribonuclease family, domain 2 HCV84_002735 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HCV84_002735 PF00575 S1 RNA binding domain HCV84_002740 PF07719 Tetratricopeptide repeat HCV84_002740 PF13181 Tetratricopeptide repeat HCV84_002750 PF00271 Helicase conserved C-terminal domain HCV84_002750 PF03880 DbpA RNA binding domain HCV84_002750 PF12343 Cold shock protein DEAD box A HCV84_002750 PF00270 DEAD/DEAH box helicase HCV84_002755 PF03222 Tryptophan/tyrosine permease family HCV84_002760 PF00296 Luciferase-like monooxygenase HCV84_002765 PF01136 Peptidase family U32 HCV84_002770 PF01136 Peptidase family U32 HCV84_002775 PF02036 SCP-2 sterol transfer family HCV84_002780 PF13508 Acetyltransferase (GNAT) domain HCV84_002785 PF01541 GIY-YIG catalytic domain HCV84_002795 PF01965 DJ-1/PfpI family HCV84_002800 PF13460 NAD(P)H-binding HCV84_002805 PF03773 Predicted permease HCV84_002810 PF04972 BON domain HCV84_002815 PF13580 SIS domain HCV84_002820 PF02021 Uncharacterised protein family UPF0102 HCV84_002825 PF04348 LppC putative lipoprotein HCV84_002830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV84_002835 PF08666 SAF domain HCV84_002835 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCV84_002840 PF07690 Major Facilitator Superfamily HCV84_002845 PF03328 HpcH/HpaI aldolase/citrate lyase family HCV84_002850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV84_002850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCV84_002855 PF02595 Glycerate kinase family HCV84_002880 PF17954 Quercetinase C-terminal cupin domain HCV84_002880 PF02678 Pirin HCV84_002885 PF03466 LysR substrate binding domain HCV84_002885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_002890 PF05656 Protein of unknown function (DUF805) HCV84_002895 PF13409 Glutathione S-transferase, N-terminal domain HCV84_002900 PF07681 DoxX HCV84_002905 PF13997 YqjK-like protein HCV84_002910 PF07332 Putative Actinobacterial Holin-X, holin superfamily III HCV84_002915 PF05957 Bacterial protein of unknown function (DUF883) HCV84_002920 PF06476 Protein of unknown function (DUF1090) HCV84_002925 PF13721 SecD export protein N-terminal TM region HCV84_002930 PF09335 SNARE associated Golgi protein HCV84_002935 PF00392 Bacterial regulatory proteins, gntR family HCV84_002935 PF07729 FCD domain HCV84_002940 PF07690 Major Facilitator Superfamily HCV84_002945 PF02614 Glucuronate isomerase HCV84_002950 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCV84_002950 PF08666 SAF domain HCV84_002955 PF10688 Bacterial inner membrane protein HCV84_002960 PF00375 Sodium:dicarboxylate symporter family HCV84_002965 PF03741 Integral membrane protein TerC family HCV84_002970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_002975 PF01863 Protein of unknown function DUF45 HCV84_002990 PF05175 Methyltransferase small domain HCV84_002995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV84_002995 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_003000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_003000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_003005 PF04198 Putative sugar-binding domain HCV84_003010 PF00005 ABC transporter HCV84_003015 PF02653 Branched-chain amino acid transport system / permease component HCV84_003020 PF02653 Branched-chain amino acid transport system / permease component HCV84_003025 PF13407 Periplasmic binding protein domain HCV84_003030 PF01791 DeoC/LacD family aldolase HCV84_003035 PF03992 Antibiotic biosynthesis monooxygenase HCV84_003040 PF00202 Aminotransferase class-III HCV84_003045 PF03551 Transcriptional regulator PadR-like family HCV84_003050 PF08021 Siderophore-interacting FAD-binding domain HCV84_003050 PF04954 Siderophore-interacting protein HCV84_003055 PF02734 DAK2 domain HCV84_003055 PF02733 Dak1 domain HCV84_003060 PF00381 PTS HPr component phosphorylation site HCV84_003060 PF05524 PEP-utilising enzyme, N-terminal HCV84_003060 PF00391 PEP-utilising enzyme, mobile domain HCV84_003060 PF03610 PTS system fructose IIA component HCV84_003065 PF02734 DAK2 domain HCV84_003070 PF02733 Dak1 domain HCV84_003080 PF00465 Iron-containing alcohol dehydrogenase HCV84_003085 PF00989 PAS fold HCV84_003085 PF00158 Sigma-54 interaction domain HCV84_003085 PF02954 Bacterial regulatory protein, Fis family HCV84_003090 PF01923 Cobalamin adenosyltransferase HCV84_003095 PF02288 Dehydratase medium subunit HCV84_003100 PF00465 Iron-containing alcohol dehydrogenase HCV84_003105 PF03928 Haem-degrading HCV84_003110 PF02286 Dehydratase large subunit HCV84_003115 PF02288 Dehydratase medium subunit HCV84_003120 PF02287 Dehydratase small subunit HCV84_003125 PF18427 DD-reactivating factor swiveling domain HCV84_003125 PF08841 Diol dehydratase reactivase ATPase-like domain HCV84_003130 PF00230 Major intrinsic protein HCV84_003135 PF06411 HdeA/HdeB family HCV84_003140 PF03729 Short repeat of unknown function (DUF308) HCV84_003145 PF10938 YfdX protein HCV84_003150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_003150 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_003150 PF00072 Response regulator receiver domain HCV84_003150 PF01627 Hpt domain HCV84_003150 PF00512 His Kinase A (phospho-acceptor) domain HCV84_003155 PF00072 Response regulator receiver domain HCV84_003155 PF00196 Bacterial regulatory proteins, luxR family HCV84_003175 PF03167 Uracil DNA glycosylase superfamily HCV84_003180 PF04542 Sigma-70 region 2 HCV84_003180 PF04539 Sigma-70 region 3 HCV84_003180 PF04545 Sigma-70, region 4 HCV84_003180 PF00140 Sigma-70 factor, region 1.2 HCV84_003180 PF04546 Sigma-70, non-essential region HCV84_003180 PF03979 Sigma-70 factor, region 1.1 HCV84_003185 PF08275 DNA primase catalytic core, N-terminal domain HCV84_003185 PF10410 DnaB-helicase binding domain of primase HCV84_003185 PF01807 CHC2 zinc finger HCV84_003185 PF08278 DNA primase DnaG DnaB-binding HCV84_003190 PF01165 Ribosomal protein S21 HCV84_003195 PF00814 Glycoprotease family HCV84_003205 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV84_003210 PF01730 UreF HCV84_003215 PF02814 UreE urease accessory protein, N-terminal domain HCV84_003215 PF05194 UreE urease accessory protein, C-terminal domain HCV84_003220 PF00449 Urease alpha-subunit, N-terminal domain HCV84_003220 PF01979 Amidohydrolase family HCV84_003225 PF00699 Urease beta subunit HCV84_003230 PF00547 Urease, gamma subunit HCV84_003235 PF01774 UreD urease accessory protein HCV84_003250 PF02660 Glycerol-3-phosphate acyltransferase HCV84_003255 PF02152 Dihydroneopterin aldolase HCV84_003260 PF02673 Bacitracin resistance protein BacA HCV84_003265 PF01743 Poly A polymerase head domain HCV84_003265 PF01966 HD domain HCV84_003265 PF12627 Probable RNA and SrmB- binding site of polymerase A HCV84_003270 PF08239 Bacterial SH3 domain HCV84_003275 PF01928 CYTH domain HCV84_003280 PF03710 Glutamate-ammonia ligase adenylyltransferase HCV84_003280 PF08335 GlnD PII-uridylyltransferase HCV84_003285 PF01467 Cytidylyltransferase-like HCV84_003285 PF00294 pfkB family carbohydrate kinase HCV84_003295 PF08971 Glycogen synthesis protein HCV84_003300 PF04380 Membrane fusogenic activity HCV84_003305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HCV84_003310 PF02535 ZIP Zinc transporter HCV84_003315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HCV84_003320 PF03738 Glutathionylspermidine synthase preATP-grasp HCV84_003325 PF06693 Protein of unknown function (DUF1190) HCV84_003330 PF02321 Outer membrane efflux protein HCV84_003335 PF00293 NUDIX domain HCV84_003340 PF06853 Protein of unknown function (DUF1249) HCV84_003345 PF00149 Calcineurin-like phosphoesterase HCV84_003350 PF05728 Uncharacterised protein family (UPF0227) HCV84_003355 PF00986 DNA gyrase B subunit, carboxyl terminus HCV84_003355 PF01751 Toprim domain HCV84_003355 PF00204 DNA gyrase B HCV84_003355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_003360 PF03992 Antibiotic biosynthesis monooxygenase HCV84_003365 PF02525 Flavodoxin-like fold HCV84_003370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_003370 PF08521 Two-component sensor kinase N-terminal HCV84_003370 PF00512 His Kinase A (phospho-acceptor) domain HCV84_003375 PF00486 Transcriptional regulatory protein, C terminal HCV84_003375 PF00072 Response regulator receiver domain HCV84_003380 PF04076 Bacterial OB fold (BOF) protein HCV84_003385 PF06445 GyrI-like small molecule binding domain HCV84_003390 PF00521 DNA gyrase/topoisomerase IV, subunit A HCV84_003390 PF03989 DNA gyrase C-terminal domain, beta-propeller HCV84_003395 PF01553 Acyltransferase HCV84_003400 PF07732 Multicopper oxidase HCV84_003400 PF07731 Multicopper oxidase HCV84_003400 PF00394 Multicopper oxidase HCV84_003405 PF11842 Domain of unknown function (DUF3362) HCV84_003405 PF04055 Radical SAM superfamily HCV84_003405 PF08497 Radical SAM N-terminal HCV84_003415 PF00248 Aldo/keto reductase family HCV84_003420 PF00465 Iron-containing alcohol dehydrogenase HCV84_003425 PF06719 AraC-type transcriptional regulator N-terminus HCV84_003425 PF12833 Helix-turn-helix domain HCV84_003430 PF09335 SNARE associated Golgi protein HCV84_003435 PF01053 Cys/Met metabolism PLP-dependent enzyme HCV84_003440 PF01618 MotA/TolQ/ExbB proton channel family HCV84_003445 PF02472 Biopolymer transport protein ExbD/TolR HCV84_003455 PF04616 Glycosyl hydrolases family 43 HCV84_003455 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HCV84_003460 PF03350 Uncharacterized protein family, UPF0114 HCV84_003465 PF01738 Dienelactone hydrolase family HCV84_003470 PF11115 Protein of unknown function (DUF2623) HCV84_003475 PF02798 Glutathione S-transferase, N-terminal domain HCV84_003490 PF03738 Glutathionylspermidine synthase preATP-grasp HCV84_003490 PF05257 CHAP domain HCV84_003495 PF00155 Aminotransferase class I and II HCV84_003515 PF03466 LysR substrate binding domain HCV84_003515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_003520 PF01053 Cys/Met metabolism PLP-dependent enzyme HCV84_003525 PF00571 CBS domain HCV84_003525 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_003535 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_003535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_003550 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_003550 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_003555 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_003555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_003560 PF13953 PapC C-terminal domain HCV84_003560 PF00577 Outer membrane usher protein HCV84_003560 PF13954 PapC N-terminal domain HCV84_003585 PF04474 Protein of unknown function (DUF554) HCV84_003590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCV84_003590 PF01276 Orn/Lys/Arg decarboxylase, major domain HCV84_003590 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HCV84_003595 PF03825 Nucleoside H+ symporter HCV84_003600 PF01464 Transglycosylase SLT domain HCV84_003600 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HCV84_003605 PF04362 Bacterial Fe(2+) trafficking HCV84_003610 PF14815 NUDIX domain HCV84_003610 PF00633 Helix-hairpin-helix motif HCV84_003610 PF00730 HhH-GPD superfamily base excision DNA repair protein HCV84_003610 PF10576 Iron-sulfur binding domain of endonuclease III HCV84_003615 PF02390 Putative methyltransferase HCV84_003620 PF04320 Protein with unknown function (DUF469) HCV84_003625 PF11101 Protein of unknown function (DUF2884) HCV84_003630 PF02653 Branched-chain amino acid transport system / permease component HCV84_003635 PF00005 ABC transporter HCV84_003645 PF04055 Radical SAM superfamily HCV84_003645 PF06969 HemN C-terminal domain HCV84_003650 PF01725 Ham1 family HCV84_003655 PF02594 Uncharacterised ACR, YggU family COG1872 HCV84_003660 PF02325 YGGT family HCV84_003665 PF01168 Alanine racemase, N-terminal domain HCV84_003670 PF00437 Type II/IV secretion system protein HCV84_003675 PF00196 Bacterial regulatory proteins, luxR family HCV84_003680 PF03652 Holliday junction resolvase HCV84_003685 PF02622 Uncharacterized ACR, COG1678 HCV84_003690 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HCV84_003690 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HCV84_003695 PF04452 RNA methyltransferase HCV84_003700 PF04231 Endonuclease I HCV84_003705 PF10263 SprT-like family HCV84_003705 PF17283 SprT-like zinc ribbon domain HCV84_003710 PF00083 Sugar (and other) transporter HCV84_003715 PF02772 S-adenosylmethionine synthetase, central domain HCV84_003715 PF00438 S-adenosylmethionine synthetase, N-terminal domain HCV84_003715 PF02773 S-adenosylmethionine synthetase, C-terminal domain HCV84_003730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HCV84_003730 PF17810 Arginine decarboxylase helical bundle domain HCV84_003730 PF17944 Arginine decarboxylase C-terminal helical extension HCV84_003735 PF00491 Arginase family HCV84_003740 PF03573 outer membrane porin, OprD family HCV84_003745 PF01435 Peptidase family M48 HCV84_003750 PF00456 Transketolase, thiamine diphosphate binding domain HCV84_003750 PF02779 Transketolase, pyrimidine binding domain HCV84_003750 PF02780 Transketolase, C-terminal domain HCV84_003755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCV84_003755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCV84_003760 PF00162 Phosphoglycerate kinase HCV84_003765 PF01116 Fructose-bisphosphate aldolase class-II HCV84_003770 PF05552 Conserved TM helix HCV84_003770 PF00924 Mechanosensitive ion channel HCV84_003775 PF01810 LysE type translocator HCV84_003780 PF04402 Protein of unknown function (DUF541) HCV84_003785 PF03466 LysR substrate binding domain HCV84_003785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_003790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HCV84_003795 PF01842 ACT domain HCV84_003795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_003795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_003800 PF01812 5-formyltetrahydrofolate cyclo-ligase family HCV84_003810 PF05164 Cell division protein ZapA HCV84_003815 PF03695 Uncharacterised protein family (UPF0149) HCV84_003820 PF05195 Aminopeptidase P, N-terminal domain HCV84_003820 PF00557 Metallopeptidase family M24 HCV84_003825 PF01494 FAD binding domain HCV84_003830 PF01494 FAD binding domain HCV84_003835 PF08669 Glycine cleavage T-protein C-terminal barrel domain HCV84_003835 PF01571 Aminomethyltransferase folate-binding domain HCV84_003840 PF01597 Glycine cleavage H-protein HCV84_003845 PF02347 Glycine cleavage system P-protein HCV84_003855 PF00578 AhpC/TSA family HCV84_003875 PF00232 Glycosyl hydrolase family 1 HCV84_003880 PF01418 Helix-turn-helix domain, rpiR family HCV84_003880 PF01380 SIS domain HCV84_003885 PF04266 ASCH domain HCV84_003890 PF03006 Haemolysin-III related HCV84_003895 PF01571 Aminomethyltransferase folate-binding domain HCV84_003900 PF03937 Flavinator of succinate dehydrogenase HCV84_003905 PF07254 Membrane-bound toxin component of toxin-antitoxin system HCV84_003910 PF00258 Flavodoxin HCV84_003915 PF00589 Phage integrase family HCV84_003915 PF02899 Phage integrase, N-terminal SAM-like domain HCV84_003920 PF13098 Thioredoxin-like domain HCV84_003920 PF10411 Disulfide bond isomerase protein N-terminus HCV84_003925 PF17768 RecJ OB domain HCV84_003925 PF02272 DHHA1 domain HCV84_003925 PF01368 DHH family HCV84_003935 PF00152 tRNA synthetases class II (D, K and N) HCV84_003935 PF01336 OB-fold nucleic acid binding domain HCV84_003940 PF00293 NUDIX domain HCV84_003945 PF04474 Protein of unknown function (DUF554) HCV84_003950 PF02441 Flavoprotein HCV84_003955 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCV84_003960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_003960 PF03466 LysR substrate binding domain HCV84_003965 PF01476 LysM domain HCV84_003965 PF01551 Peptidase family M23 HCV84_003975 PF07690 Major Facilitator Superfamily HCV84_003980 PF03466 LysR substrate binding domain HCV84_003980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_003990 PF00248 Aldo/keto reductase family HCV84_003995 PF02525 Flavodoxin-like fold HCV84_004005 PF03466 LysR substrate binding domain HCV84_004005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_004025 PF01022 Bacterial regulatory protein, arsR family HCV84_004030 PF02040 Arsenical pump membrane protein HCV84_004035 PF03960 ArsC family HCV84_004040 PF00854 POT family HCV84_004045 PF08986 Domain of unknown function (DUF1889) HCV84_004050 PF02321 Outer membrane efflux protein HCV84_004055 PF04632 Fusaric acid resistance protein family HCV84_004060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_004060 PF00529 HlyD membrane-fusion protein of T1SS HCV84_004065 PF17090 Uncharacterised protein family HCV84_004070 PF06902 Divergent 4Fe-4S mono-cluster HCV84_004075 PF14542 GCN5-related N-acetyl-transferase HCV84_004085 PF00419 Fimbrial protein HCV84_004085 PF09160 FimH, mannose binding HCV84_004095 PF00419 Fimbrial protein HCV84_004100 PF13954 PapC N-terminal domain HCV84_004100 PF13953 PapC C-terminal domain HCV84_004100 PF00577 Outer membrane usher protein HCV84_004105 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_004105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_004110 PF00419 Fimbrial protein HCV84_004115 PF00419 Fimbrial protein HCV84_004120 PF00589 Phage integrase family HCV84_004125 PF00589 Phage integrase family HCV84_004130 PF03824 High-affinity nickel-transport protein HCV84_004135 PF01047 MarR family HCV84_004140 PF00892 EamA-like transporter family HCV84_004150 PF00419 Fimbrial protein HCV84_004155 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_004155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_004160 PF13954 PapC N-terminal domain HCV84_004160 PF00577 Outer membrane usher protein HCV84_004160 PF13953 PapC C-terminal domain HCV84_004165 PF00419 Fimbrial protein HCV84_004180 PF00072 Response regulator receiver domain HCV84_004180 PF00196 Bacterial regulatory proteins, luxR family HCV84_004190 PF00248 Aldo/keto reductase family HCV84_004195 PF03222 Tryptophan/tyrosine permease family HCV84_004205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_004205 PF03466 LysR substrate binding domain HCV84_004210 PF02803 Thiolase, C-terminal domain HCV84_004210 PF00108 Thiolase, N-terminal domain HCV84_004215 PF06178 Oligogalacturonate-specific porin protein (KdgM) HCV84_004220 PF14583 Oligogalacturonate lyase HCV84_004230 PF00083 Sugar (and other) transporter HCV84_004235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV84_004235 PF00356 Bacterial regulatory proteins, lacI family HCV84_004245 PF01306 LacY proton/sugar symporter HCV84_004250 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCV84_004250 PF08244 Glycosyl hydrolases family 32 C terminal HCV84_004265 PF17912 MalK OB fold domain HCV84_004265 PF00005 ABC transporter HCV84_004270 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_004275 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_004280 PF16867 Dimethlysulfonioproprionate lyase HCV84_004285 PF01177 Asp/Glu/Hydantoin racemase HCV84_004290 PF03466 LysR substrate binding domain HCV84_004290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_004295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HCV84_004295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HCV84_004300 PF00356 Bacterial regulatory proteins, lacI family HCV84_004305 PF02378 Phosphotransferase system, EIIC HCV84_004310 PF00232 Glycosyl hydrolase family 1 HCV84_004315 PF07729 FCD domain HCV84_004315 PF00392 Bacterial regulatory proteins, gntR family HCV84_004325 PF00356 Bacterial regulatory proteins, lacI family HCV84_004335 PF01553 Acyltransferase HCV84_004335 PF00501 AMP-binding enzyme HCV84_004340 PF07690 Major Facilitator Superfamily HCV84_004345 PF00248 Aldo/keto reductase family HCV84_004350 PF06004 Bacterial protein of unknown function (DUF903) HCV84_004355 PF03741 Integral membrane protein TerC family HCV84_004360 PF02976 DNA mismatch repair enzyme MutH HCV84_004370 PF00293 NUDIX domain HCV84_004375 PF00391 PEP-utilising enzyme, mobile domain HCV84_004375 PF02896 PEP-utilising enzyme, TIM barrel domain HCV84_004375 PF05524 PEP-utilising enzyme, N-terminal HCV84_004375 PF01590 GAF domain HCV84_004380 PF01790 Prolipoprotein diacylglyceryl transferase HCV84_004385 PF00303 Thymidylate synthase HCV84_004390 PF07963 Prokaryotic N-terminal methylation motif HCV84_004395 PF07963 Prokaryotic N-terminal methylation motif HCV84_004400 PF10713 Protein of unknown function (DUF2509) HCV84_004405 PF07963 Prokaryotic N-terminal methylation motif HCV84_004405 PF12528 Type II secretion prepilin peptidase dependent protein C HCV84_004410 PF17946 RecC C-terminal domain HCV84_004415 PF16187 Middle or third domain of peptidase_M16 HCV84_004415 PF00675 Insulinase (Peptidase family M16) HCV84_004415 PF05193 Peptidase M16 inactive domain HCV84_004420 PF00580 UvrD/REP helicase N-terminal domain HCV84_004420 PF13361 UvrD-like helicase C-terminal domain HCV84_004420 PF12705 PD-(D/E)XK nuclease superfamily HCV84_004425 PF13538 UvrD-like helicase C-terminal domain HCV84_004435 PF00583 Acetyltransferase (GNAT) family HCV84_004435 PF00696 Amino acid kinase family HCV84_004440 PF11741 AMIN domain HCV84_004440 PF01520 N-acetylmuramoyl-L-alanine amidase HCV84_004445 PF00155 Aminotransferase class I and II HCV84_004450 PF00288 GHMP kinases N terminal domain HCV84_004455 PF00871 Acetokinase family HCV84_004460 PF10662 Ethanolamine utilisation - propanediol utilisation HCV84_004465 PF00936 BMC domain HCV84_004475 PF13375 RnfC Barrel sandwich hybrid domain HCV84_004475 PF13237 4Fe-4S dicluster domain HCV84_004475 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HCV84_004475 PF10531 SLBB domain HCV84_004480 PF00465 Iron-containing alcohol dehydrogenase HCV84_004480 PF00171 Aldehyde dehydrogenase family HCV84_004485 PF00171 Aldehyde dehydrogenase family HCV84_004490 PF01923 Cobalamin adenosyltransferase HCV84_004495 PF03319 Ethanolamine utilisation protein EutN/carboxysome HCV84_004505 PF06130 Phosphate propanoyltransferase HCV84_004510 PF00936 BMC domain HCV84_004515 PF00936 BMC domain HCV84_004525 PF08841 Diol dehydratase reactivase ATPase-like domain HCV84_004525 PF18427 DD-reactivating factor swiveling domain HCV84_004530 PF02287 Dehydratase small subunit HCV84_004535 PF02288 Dehydratase medium subunit HCV84_004540 PF02286 Dehydratase large subunit HCV84_004545 PF00936 BMC domain HCV84_004550 PF00936 BMC domain HCV84_004555 PF00230 Major intrinsic protein HCV84_004560 PF10114 Sensory domain found in PocR HCV84_004560 PF12833 Helix-turn-helix domain HCV84_004565 PF07685 CobB/CobQ-like glutamine amidotransferase domain HCV84_004565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HCV84_004570 PF03186 CobD/Cbib protein HCV84_004575 PF02570 Precorrin-8X methylmutase HCV84_004580 PF01888 CbiD HCV84_004585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV84_004590 PF05175 Methyltransferase small domain HCV84_004595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV84_004600 PF01890 Cobalamin synthesis G C-terminus HCV84_004600 PF11761 Cobalamin biosynthesis central region HCV84_004600 PF11760 Cobalamin synthesis G N-terminal HCV84_004605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV84_004610 PF02571 Precorrin-6x reductase CbiJ/CobK HCV84_004615 PF06180 Cobalt chelatase (CbiK) HCV84_004620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV84_004625 PF01891 Cobalt uptake substrate-specific transmembrane region HCV84_004630 PF02553 Cobalt transport protein component CbiN HCV84_004635 PF02361 Cobalt transport protein HCV84_004640 PF00005 ABC transporter HCV84_004645 PF07685 CobB/CobQ-like glutamine amidotransferase domain HCV84_004650 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HCV84_004655 PF02277 Phosphoribosyltransferase HCV84_004710 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HCV84_004710 PF13296 Putative type VI secretion system Rhs element Vgr HCV84_004710 PF04717 Type VI secretion system, phage-baseplate injector HCV84_004715 PF13488 Glycine zipper HCV84_004715 PF00691 OmpA family HCV84_004750 PF06725 3D domain HCV84_004750 PF03562 MltA specific insert domain HCV84_004755 PF00899 ThiF family HCV84_004760 PF02657 Fe-S metabolism associated domain HCV84_004765 PF00266 Aminotransferase class-V HCV84_004770 PF06004 Bacterial protein of unknown function (DUF903) HCV84_004775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_004775 PF03466 LysR substrate binding domain HCV84_004780 PF04241 Protein of unknown function (DUF423) HCV84_004785 PF01728 FtsJ-like methyltransferase HCV84_004785 PF18125 RlmM ferredoxin-like domain HCV84_004790 PF00455 DeoR C terminal sensor domain HCV84_004790 PF08220 DeoR-like helix-turn-helix domain HCV84_004795 PF05025 RbsD / FucU transport protein family HCV84_004800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_004800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_004805 PF07881 L-fucose isomerase, first N-terminal domain HCV84_004805 PF07882 L-fucose isomerase, second N-terminal domain HCV84_004805 PF02952 L-fucose isomerase, C-terminal domain HCV84_004810 PF07690 Major Facilitator Superfamily HCV84_004815 PF00596 Class II Aldolase and Adducin N-terminal domain HCV84_004820 PF00465 Iron-containing alcohol dehydrogenase HCV84_004825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCV84_004825 PF01367 5'-3' exonuclease, C-terminal SAM fold HCV84_004830 PF00158 Sigma-54 interaction domain HCV84_004840 PF00296 Luciferase-like monooxygenase HCV84_004850 PF00296 Luciferase-like monooxygenase HCV84_004855 PF00005 ABC transporter HCV84_004860 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_004865 PF03180 NLPA lipoprotein HCV84_004870 PF07690 Major Facilitator Superfamily HCV84_004880 PF09084 NMT1/THI5 like HCV84_004885 PF03313 Serine dehydratase alpha chain HCV84_004885 PF03315 Serine dehydratase beta chain HCV84_004895 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HCV84_004895 PF03641 Possible lysine decarboxylase HCV84_004895 PF11892 Domain of unknown function (DUF3412) HCV84_004900 PF14489 QueF-like protein HCV84_004900 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HCV84_004905 PF07348 Syd protein (SUKH-2) HCV84_004910 PF04287 tRNA pseudouridine synthase C HCV84_004915 PF00849 RNA pseudouridylate synthase HCV84_004920 PF00258 Flavodoxin HCV84_004925 PF07690 Major Facilitator Superfamily HCV84_004930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV84_004930 PF13378 Enolase C-terminal domain-like HCV84_004935 PF13378 Enolase C-terminal domain-like HCV84_004940 PF02595 Glycerate kinase family HCV84_004945 PF00672 HAMP domain HCV84_004945 PF00512 His Kinase A (phospho-acceptor) domain HCV84_004945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HCV84_004945 PF01627 Hpt domain HCV84_004945 PF00072 Response regulator receiver domain HCV84_004945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_004950 PF01938 TRAM domain HCV84_004950 PF05958 tRNA (Uracil-5-)-methyltransferase HCV84_004955 PF02824 TGS domain HCV84_004955 PF13291 ACT domain HCV84_004955 PF04607 Region found in RelA / SpoT proteins HCV84_004960 PF03819 MazG nucleotide pyrophosphohydrolase domain HCV84_004965 PF00117 Glutamine amidotransferase class-I HCV84_004965 PF06418 CTP synthase N-terminus HCV84_004970 PF00113 Enolase, C-terminal TIM barrel domain HCV84_004970 PF03952 Enolase, N-terminal domain HCV84_004980 PF04055 Radical SAM superfamily HCV84_004985 PF01242 6-pyruvoyl tetrahydropterin synthase HCV84_004990 PF00175 Oxidoreductase NAD-binding domain HCV84_004990 PF00258 Flavodoxin HCV84_004990 PF00667 FAD binding domain HCV84_004995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCV84_004995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCV84_005000 PF01507 Phosphoadenosine phosphosulfate reductase family HCV84_005005 PF04389 Peptidase family M28 HCV84_005010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV84_005010 PF10414 Sirohaem synthase dimerisation region HCV84_005010 PF14824 Sirohaem biosynthesis protein central HCV84_005015 PF01507 Phosphoadenosine phosphosulfate reductase family HCV84_005020 PF00009 Elongation factor Tu GTP binding domain HCV84_005030 PF12084 Protein of unknown function (DUF3561) HCV84_005035 PF04977 Septum formation initiator HCV84_005040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HCV84_005045 PF02542 YgbB family HCV84_005050 PF01142 tRNA pseudouridine synthase D (TruD) HCV84_005055 PF01975 Survival protein SurE HCV84_005065 PF01551 Peptidase family M23 HCV84_005065 PF01476 LysM domain HCV84_005070 PF04545 Sigma-70, region 4 HCV84_005070 PF04542 Sigma-70 region 2 HCV84_005070 PF00140 Sigma-70 factor, region 1.2 HCV84_005070 PF04539 Sigma-70 region 3 HCV84_005080 PF07690 Major Facilitator Superfamily HCV84_005085 PF03466 LysR substrate binding domain HCV84_005085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_005090 PF01047 MarR family HCV84_005095 PF02441 Flavoprotein HCV84_005100 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCV84_005110 PF01848 Hok/gef family HCV84_005115 PF00488 MutS domain V HCV84_005115 PF01624 MutS domain I HCV84_005115 PF05190 MutS family domain IV HCV84_005115 PF05188 MutS domain II HCV84_005115 PF05192 MutS domain III HCV84_005135 PF00005 ABC transporter HCV84_005140 PF01032 FecCD transport family HCV84_005145 PF01497 Periplasmic binding protein HCV84_005150 PF05171 Haemin-degrading HemS.ChuX domain HCV84_005155 PF00593 TonB dependent receptor HCV84_005155 PF07715 TonB-dependent Receptor Plug Domain HCV84_005165 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_005165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_005165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_005170 PF03547 Membrane transport protein HCV84_005180 PF11756 Nitrous oxide-stimulated promoter HCV84_005185 PF00950 ABC 3 transport family HCV84_005190 PF00950 ABC 3 transport family HCV84_005195 PF00005 ABC transporter HCV84_005200 PF01297 Zinc-uptake complex component A periplasmic HCV84_005205 PF00356 Bacterial regulatory proteins, lacI family HCV84_005210 PF00480 ROK family HCV84_005215 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV84_005220 PF02378 Phosphotransferase system, EIIC HCV84_005225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_005230 PF02378 Phosphotransferase system, EIIC HCV84_005235 PF02264 LamB porin HCV84_005245 PF00232 Glycosyl hydrolase family 1 HCV84_005255 PF02769 AIR synthase related protein, C-terminal domain HCV84_005255 PF00586 AIR synthase related protein, N-terminal domain HCV84_005260 PF01924 Hydrogenase formation hypA family HCV84_005265 PF01455 HupF/HypC family HCV84_005270 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV84_005275 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HCV84_005280 PF11046 Transcriptional repressor of hyc and hyp operons HCV84_005285 PF13247 4Fe-4S dicluster domain HCV84_005290 PF00361 Proton-conducting membrane transporter HCV84_005295 PF00146 NADH dehydrogenase HCV84_005300 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HCV84_005300 PF00374 Nickel-dependent hydrogenase HCV84_005300 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HCV84_005305 PF12838 4Fe-4S dicluster domain HCV84_005310 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HCV84_005315 PF07450 Formate hydrogenlyase maturation protein HycH HCV84_005320 PF01750 Hydrogenase maturation protease HCV84_005325 PF08845 Toxin SymE, type I toxin-antitoxin system HCV84_005330 PF00232 Glycosyl hydrolase family 1 HCV84_005335 PF02378 Phosphotransferase system, EIIC HCV84_005335 PF00367 phosphotransferase system, EIIB HCV84_005340 PF00356 Bacterial regulatory proteins, lacI family HCV84_005345 PF12800 4Fe-4S binding domain HCV84_005345 PF13247 4Fe-4S dicluster domain HCV84_005350 PF00708 Acylphosphatase HCV84_005350 PF17788 HypF Kae1-like domain HCV84_005350 PF01300 Telomere recombination HCV84_005350 PF07503 HypF finger HCV84_005355 PF03824 High-affinity nickel-transport protein HCV84_005360 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_005360 PF18113 Rubredoxin binding C-terminal domain HCV84_005365 PF00258 Flavodoxin HCV84_005365 PF00301 Rubredoxin HCV84_005365 PF00753 Metallo-beta-lactamase superfamily HCV84_005370 PF00158 Sigma-54 interaction domain HCV84_005370 PF01590 GAF domain HCV84_005375 PF01380 SIS domain HCV84_005375 PF00571 CBS domain HCV84_005380 PF00455 DeoR C terminal sensor domain HCV84_005380 PF08220 DeoR-like helix-turn-helix domain HCV84_005385 PF06923 Glucitol operon activator protein (GutM) HCV84_005390 PF00106 short chain dehydrogenase HCV84_005395 PF03829 PTS system glucitol/sorbitol-specific IIA component HCV84_005400 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HCV84_005400 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HCV84_005405 PF03608 PTS system enzyme II sorbitol-specific factor HCV84_005410 PF13406 Transglycosylase SLT domain HCV84_005415 PF00005 ABC transporter HCV84_005420 PF00950 ABC 3 transport family HCV84_005425 PF01297 Zinc-uptake complex component A periplasmic HCV84_005430 PF02464 Competence-damaged protein HCV84_005435 PF00154 recA bacterial DNA recombination protein HCV84_005440 PF02631 RecX family HCV84_005445 PF02272 DHHA1 domain HCV84_005445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCV84_005445 PF01411 tRNA synthetases class II (A) HCV84_005450 PF02599 Global regulator protein family HCV84_005480 PF04972 BON domain HCV84_005485 PF13419 Haloacid dehalogenase-like hydrolase HCV84_005490 PF09335 SNARE associated Golgi protein HCV84_005495 PF04262 Glutamate-cysteine ligase HCV84_005500 PF02664 S-Ribosylhomocysteinase (LuxS) HCV84_005505 PF12852 Cupin HCV84_005505 PF12833 Helix-turn-helix domain HCV84_005510 PF08502 LeuA allosteric (dimerisation) domain HCV84_005510 PF00682 HMGL-like HCV84_005515 PF07690 Major Facilitator Superfamily HCV84_005520 PF00529 HlyD membrane-fusion protein of T1SS HCV84_005520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_005525 PF01047 MarR family HCV84_005530 PF05437 Branched-chain amino acid transport protein (AzlD) HCV84_005535 PF03591 AzlC protein HCV84_005540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCV84_005545 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_005550 PF00571 CBS domain HCV84_005550 PF00005 ABC transporter HCV84_005555 PF00268 Ribonucleotide reductase, small chain HCV84_005560 PF00317 Ribonucleotide reductase, all-alpha domain HCV84_005560 PF08343 Ribonucleotide reductase N-terminal HCV84_005560 PF02867 Ribonucleotide reductase, barrel domain HCV84_005565 PF07972 NrdI Flavodoxin like HCV84_005570 PF00462 Glutaredoxin HCV84_005575 PF02627 Carboxymuconolactone decarboxylase family HCV84_005580 PF00392 Bacterial regulatory proteins, gntR family HCV84_005580 PF00155 Aminotransferase class I and II HCV84_005585 PF05957 Bacterial protein of unknown function (DUF883) HCV84_005590 PF09400 Protein of unknown function (DUF2002) HCV84_005595 PF06610 L-alanine exporter HCV84_005600 PF00816 H-NS histone family HCV84_005615 PF00581 Rhodanese-like domain HCV84_005615 PF11127 Protein of unknown function (DUF2892) HCV84_005620 PF01022 Bacterial regulatory protein, arsR family HCV84_005625 PF02525 Flavodoxin-like fold HCV84_005630 PF03466 LysR substrate binding domain HCV84_005630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_005635 PF00158 Sigma-54 interaction domain HCV84_005635 PF01590 GAF domain HCV84_005635 PF02954 Bacterial regulatory protein, Fis family HCV84_005640 PF00171 Aldehyde dehydrogenase family HCV84_005645 PF16970 Type-1 fimbrial protein, A HCV84_005650 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_005650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_005655 PF13953 PapC C-terminal domain HCV84_005655 PF00577 Outer membrane usher protein HCV84_005655 PF13954 PapC N-terminal domain HCV84_005670 PF13953 PapC C-terminal domain HCV84_005670 PF00577 Outer membrane usher protein HCV84_005670 PF13954 PapC N-terminal domain HCV84_005675 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_005675 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_005680 PF00419 Fimbrial protein HCV84_005685 PF00072 Response regulator receiver domain HCV84_005685 PF00196 Bacterial regulatory proteins, luxR family HCV84_005700 PF00106 short chain dehydrogenase HCV84_005705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_005710 PF00596 Class II Aldolase and Adducin N-terminal domain HCV84_005715 PF00005 ABC transporter HCV84_005720 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_005735 PF00491 Arginase family HCV84_005740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_005740 PF03466 LysR substrate binding domain HCV84_005745 PF02082 Transcriptional regulator HCV84_005750 PF00873 AcrB/AcrD/AcrF family HCV84_005760 PF06445 GyrI-like small molecule binding domain HCV84_005760 PF12833 Helix-turn-helix domain HCV84_005770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_005770 PF03466 LysR substrate binding domain HCV84_005785 PF01668 SmpB protein HCV84_005790 PF03364 Polyketide cyclase / dehydrase and lipid transport HCV84_005795 PF03658 RnfH family Ubiquitin HCV84_005800 PF04355 SmpA / OmlA family HCV84_005805 PF02463 RecF/RecN/SMC N terminal domain HCV84_005810 PF01513 ATP-NAD kinase HCV84_005815 PF01025 GrpE HCV84_005820 PF01595 Cyclin M transmembrane N-terminal domain HCV84_005820 PF00571 CBS domain HCV84_005820 PF03471 Transporter associated domain HCV84_005825 PF01578 Cytochrome C assembly protein HCV84_005830 PF00448 SRP54-type protein, GTPase domain HCV84_005830 PF02881 SRP54-type protein, helical bundle domain HCV84_005830 PF02978 Signal peptide binding domain HCV84_005835 PF00886 Ribosomal protein S16 HCV84_005840 PF01782 RimM N-terminal domain HCV84_005840 PF05239 PRC-barrel domain HCV84_005845 PF01746 tRNA (Guanine-1)-methyltransferase HCV84_005850 PF01245 Ribosomal protein L19 HCV84_005865 PF00691 OmpA family HCV84_005870 PF00990 Diguanylate cyclase, GGDEF domain HCV84_005870 PF17152 Periplasmic sensor domain HCV84_005875 PF13689 YfiR/HmsC-like HCV84_005880 PF00793 DAHP synthetase I family HCV84_005885 PF01817 Chorismate mutase type II HCV84_005885 PF02153 Prephenate dehydrogenase HCV84_005890 PF08450 SMP-30/Gluconolactonase/LRE-like region HCV84_005895 PF01817 Chorismate mutase type II HCV84_005895 PF00800 Prephenate dehydratase HCV84_005905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HCV84_005910 PF13525 Outer membrane lipoprotein HCV84_005915 PF01479 S4 domain HCV84_005915 PF00849 RNA pseudouridylate synthase HCV84_005920 PF02578 Multi-copper polyphenol oxidoreductase laccase HCV84_005925 PF10431 C-terminal, D2-small domain, of ClpB protein HCV84_005925 PF07724 AAA domain (Cdc48 subfamily) HCV84_005925 PF17871 AAA lid domain HCV84_005925 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_005925 PF02861 Clp amino terminal domain, pathogenicity island component HCV84_005950 PF00083 Sugar (and other) transporter HCV84_005955 PF10043 Predicted periplasmic lipoprotein (DUF2279) HCV84_005960 PF13091 PLD-like domain HCV84_005965 PF13380 CoA binding domain HCV84_005965 PF13607 Succinyl-CoA ligase like flavodoxin domain HCV84_005965 PF00583 Acetyltransferase (GNAT) family HCV84_005970 PF03942 DTW domain HCV84_005975 PF00085 Thioredoxin HCV84_005980 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCV84_005980 PF00588 SpoU rRNA Methylase family HCV84_005985 PF03167 Uracil DNA glycosylase superfamily HCV84_005990 PF01228 Glycine radical HCV84_005995 PF00270 DEAD/DEAH box helicase HCV84_005995 PF00271 Helicase conserved C-terminal domain HCV84_006000 PF05175 Methyltransferase small domain HCV84_006005 PF00890 FAD binding domain HCV84_006005 PF02910 Fumarate reductase flavoprotein C-term HCV84_006015 PF04542 Sigma-70 region 2 HCV84_006015 PF08281 Sigma-70, region 4 HCV84_006020 PF03873 Anti sigma-E protein RseA, C-terminal domain HCV84_006020 PF03872 Anti sigma-E protein RseA, N-terminal domain HCV84_006025 PF17188 MucB/RseB C-terminal domain HCV84_006025 PF03888 MucB/RseB N-terminal domain HCV84_006065 PF06630 Enterobacterial exodeoxyribonuclease VIII HCV84_006065 PF12684 PDDEXK-like domain of unknown function (DUF3799) HCV84_006075 PF07358 Protein of unknown function (DUF1482) HCV84_006120 PF01695 IstB-like ATP binding protein HCV84_006165 PF06183 DinI-like family HCV84_006180 PF07102 Protein of unknown function (DUF1364) HCV84_006185 PF05866 Endodeoxyribonuclease RusA HCV84_006190 PF03589 Antitermination protein HCV84_006205 PF00959 Phage lysozyme HCV84_006310 PF01551 Peptidase family M23 HCV84_006310 PF10145 Phage-related minor tail protein HCV84_006310 PF01464 Transglycosylase SLT domain HCV84_006380 PF03592 Terminase small subunit HCV84_006380 PF10668 Phage terminase small subunit HCV84_006430 PF07120 Protein of unknown function (DUF1376) HCV84_006435 PF00149 Calcineurin-like phosphoesterase HCV84_006465 PF12684 PDDEXK-like domain of unknown function (DUF3799) HCV84_006465 PF06630 Enterobacterial exodeoxyribonuclease VIII HCV84_006510 PF00958 GMP synthase C terminal domain HCV84_006510 PF00117 Glutamine amidotransferase class-I HCV84_006510 PF02540 NAD synthase HCV84_006515 PF00571 CBS domain HCV84_006515 PF00478 IMP dehydrogenase / GMP reductase domain HCV84_006520 PF02601 Exonuclease VII, large subunit HCV84_006520 PF13742 OB-fold nucleic acid binding domain HCV84_006525 PF07191 zinc-ribbons HCV84_006535 PF01926 50S ribosome-binding GTPase HCV84_006535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HCV84_006540 PF13360 PQQ-like domain HCV84_006545 PF09976 Tetratricopeptide repeat-like domain HCV84_006550 PF13393 Histidyl-tRNA synthetase HCV84_006550 PF03129 Anticodon binding domain HCV84_006555 PF04551 GcpE protein HCV84_006560 PF13464 Domain of unknown function (DUF4115) HCV84_006565 PF04055 Radical SAM superfamily HCV84_006570 PF00334 Nucleoside diphosphate kinase HCV84_006575 PF06832 Penicillin-Binding Protein C-terminus Family HCV84_006575 PF00912 Transglycosylase HCV84_006575 PF00905 Penicillin binding protein transpeptidase domain HCV84_006580 PF07703 Alpha-2-macroglobulin bait region domain HCV84_006580 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HCV84_006580 PF00207 Alpha-2-macroglobulin family HCV84_006580 PF01835 MG2 domain HCV84_006580 PF07678 A-macroglobulin TED domain HCV84_006580 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HCV84_006580 PF17962 Bacterial macroglobulin domain 6 HCV84_006580 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HCV84_006580 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HCV84_006585 PF00581 Rhodanese-like domain HCV84_006595 PF07179 SseB protein N-terminal domain HCV84_006595 PF14581 SseB protein C-terminal domain HCV84_006600 PF12404 Peptidase HCV84_006600 PF00883 Cytosol aminopeptidase family, catalytic domain HCV84_006605 PF04384 Iron-sulphur cluster assembly HCV84_006610 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_006615 PF00012 Hsp70 protein HCV84_006620 PF00226 DnaJ domain HCV84_006620 PF07743 HSCB C-terminal oligomerisation domain HCV84_006625 PF01521 Iron-sulphur cluster biosynthesis HCV84_006630 PF01592 NifU-like N terminal domain HCV84_006635 PF00266 Aminotransferase class-V HCV84_006640 PF02082 Transcriptional regulator HCV84_006645 PF00588 SpoU rRNA Methylase family HCV84_006650 PF00459 Inositol monophosphatase family HCV84_006660 PF03824 High-affinity nickel-transport protein HCV84_006665 PF06226 Protein of unknown function (DUF1007) HCV84_006670 PF00874 PRD domain HCV84_006675 PF12832 MFS_1 like family HCV84_006680 PF01263 Aldose 1-epimerase HCV84_006685 PF00083 Sugar (and other) transporter HCV84_006690 PF13181 Tetratricopeptide repeat HCV84_006690 PF17128 Domain of unknown function (DUF5107) HCV84_006695 PF00480 ROK family HCV84_006700 PF07681 DoxX HCV84_006705 PF00464 Serine hydroxymethyltransferase HCV84_006710 PF00175 Oxidoreductase NAD-binding domain HCV84_006710 PF00042 Globin HCV84_006710 PF00970 Oxidoreductase FAD-binding domain HCV84_006715 PF00543 Nitrogen regulatory protein P-II HCV84_006720 PF00158 Sigma-54 interaction domain HCV84_006720 PF00072 Response regulator receiver domain HCV84_006725 PF13942 YfhG lipoprotein HCV84_006730 PF00512 His Kinase A (phospho-acceptor) domain HCV84_006730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_006735 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HCV84_006735 PF02769 AIR synthase related protein, C-terminal domain HCV84_006735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HCV84_006740 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_006740 PF01464 Transglycosylase SLT domain HCV84_006745 PF14437 MafB19-like deaminase HCV84_006755 PF01418 Helix-turn-helix domain, rpiR family HCV84_006755 PF01380 SIS domain HCV84_006760 PF12838 4Fe-4S dicluster domain HCV84_006765 PF01648 4'-phosphopantetheinyl transferase superfamily HCV84_006770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HCV84_006775 PF02565 Recombination protein O C terminal HCV84_006775 PF11967 Recombination protein O N terminal HCV84_006780 PF07650 KH domain HCV84_006780 PF01926 50S ribosome-binding GTPase HCV84_006785 PF00035 Double-stranded RNA binding motif HCV84_006785 PF14622 Ribonuclease-III-like HCV84_006790 PF10502 Signal peptidase, peptidase S26 HCV84_006795 PF00679 Elongation factor G C-terminus HCV84_006795 PF03144 Elongation factor Tu domain 2 HCV84_006795 PF06421 GTP-binding protein LepA C-terminus HCV84_006795 PF00009 Elongation factor Tu GTP binding domain HCV84_006845 PF06791 Prophage tail length tape measure protein HCV84_006925 PF10668 Phage terminase small subunit HCV84_006925 PF03592 Terminase small subunit HCV84_007075 PF00717 Peptidase S24-like HCV84_007075 PF01381 Helix-turn-helix HCV84_007080 PF13614 AAA domain HCV84_007270 PF00884 Sulfatase HCV84_007275 PF13186 Iron-sulfur cluster-binding domain HCV84_007275 PF04055 Radical SAM superfamily HCV84_007285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_007285 PF03466 LysR substrate binding domain HCV84_007290 PF11119 Protein of unknown function (DUF2633) HCV84_007295 PF05231 MASE1 HCV84_007295 PF00563 EAL domain HCV84_007300 PF02541 Ppx/GppA phosphatase family HCV84_007305 PF13089 Polyphosphate kinase N-terminal domain HCV84_007305 PF17941 Polyphosphate kinase C-terminal domain 1 HCV84_007305 PF13090 Polyphosphate kinase C-terminal domain 2 HCV84_007305 PF02503 Polyphosphate kinase middle domain HCV84_007310 PF00551 Formyl transferase HCV84_007315 PF02769 AIR synthase related protein, C-terminal domain HCV84_007315 PF00586 AIR synthase related protein, N-terminal domain HCV84_007320 PF00480 ROK family HCV84_007325 PF00232 Glycosyl hydrolase family 1 HCV84_007335 PF00860 Permease family HCV84_007340 PF00308 Bacterial dnaA protein HCV84_007345 PF04754 Putative transposase, YhgA-like HCV84_007350 PF03960 ArsC family HCV84_007355 PF01435 Peptidase family M48 HCV84_007365 PF01594 AI-2E family transporter HCV84_007370 PF00578 AhpC/TSA family HCV84_007375 PF01842 ACT domain HCV84_007380 PF00701 Dihydrodipicolinate synthetase family HCV84_007385 PF06804 NlpB/DapX lipoprotein HCV84_007390 PF01259 SAICAR synthetase HCV84_007395 PF04228 Putative neutral zinc metallopeptidase HCV84_007400 PF08351 Domain of unknown function (DUF1726) HCV84_007400 PF13718 GNAT acetyltransferase 2 HCV84_007400 PF05127 Helicase HCV84_007400 PF17176 tRNA-binding domain HCV84_007405 PF02230 Phospholipase/Carboxylesterase HCV84_007410 PF13980 Uncharacterised protein family (UPF0370) HCV84_007415 PF07687 Peptidase dimerisation domain HCV84_007415 PF01546 Peptidase family M20/M25/M40 HCV84_007420 PF03960 ArsC family HCV84_007430 PF00873 AcrB/AcrD/AcrF family HCV84_007435 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_007435 PF13247 4Fe-4S dicluster domain HCV84_007435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HCV84_007440 PF00293 NUDIX domain HCV84_007445 PF06674 Protein of unknown function (DUF1176) HCV84_007450 PF02779 Transketolase, pyrimidine binding domain HCV84_007450 PF02780 Transketolase, C-terminal domain HCV84_007450 PF00456 Transketolase, thiamine diphosphate binding domain HCV84_007455 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCV84_007460 PF03949 Malic enzyme, NAD binding domain HCV84_007460 PF01515 Phosphate acetyl/butaryl transferase HCV84_007460 PF00390 Malic enzyme, N-terminal domain HCV84_007465 PF00936 BMC domain HCV84_007470 PF10662 Ethanolamine utilisation - propanediol utilisation HCV84_007475 PF06249 Ethanolamine utilisation protein EutQ HCV84_007480 PF01923 Cobalamin adenosyltransferase HCV84_007485 PF01515 Phosphate acetyl/butaryl transferase HCV84_007490 PF00936 BMC domain HCV84_007495 PF03319 Ethanolamine utilisation protein EutN/carboxysome HCV84_007500 PF00171 Aldehyde dehydrogenase family HCV84_007510 PF00465 Iron-containing alcohol dehydrogenase HCV84_007515 PF04346 Ethanolamine utilisation protein, EutH HCV84_007520 PF06277 Ethanolamine utilisation protein EutA HCV84_007525 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HCV84_007530 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HCV84_007535 PF00936 BMC domain HCV84_007540 PF16365 Ethanolamine utilization protein EutK C-terminus HCV84_007540 PF00936 BMC domain HCV84_007545 PF12833 Helix-turn-helix domain HCV84_007550 PF01218 Coproporphyrinogen III oxidase HCV84_007555 PF01520 N-acetylmuramoyl-L-alanine amidase HCV84_007560 PF00583 Acetyltransferase (GNAT) family HCV84_007565 PF11143 Protein of unknown function (DUF2919) HCV84_007570 PF06572 Protein of unknown function (DUF1131) HCV84_007575 PF04261 Dyp-type peroxidase family HCV84_007590 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_007595 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_007600 PF00005 ABC transporter HCV84_007605 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_007610 PF13474 SnoaL-like domain HCV84_007615 PF00155 Aminotransferase class I and II HCV84_007615 PF00392 Bacterial regulatory proteins, gntR family HCV84_007620 PF08543 Phosphomethylpyrimidine kinase HCV84_007630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCV84_007635 PF05524 PEP-utilising enzyme, N-terminal HCV84_007635 PF00391 PEP-utilising enzyme, mobile domain HCV84_007635 PF02896 PEP-utilising enzyme, TIM barrel domain HCV84_007640 PF00381 PTS HPr component phosphorylation site HCV84_007645 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_007655 PF04354 ZipA, C-terminal FtsZ-binding domain HCV84_007660 PF00533 BRCA1 C Terminus (BRCT) domain HCV84_007660 PF01653 NAD-dependent DNA ligase adenylation domain HCV84_007660 PF03120 NAD-dependent DNA ligase OB-fold domain HCV84_007660 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HCV84_007660 PF12826 Helix-hairpin-helix motif HCV84_007665 PF12843 Putative quorum-sensing-regulated virulence factor HCV84_007670 PF13593 SBF-like CPA transporter family (DUF4137) HCV84_007675 PF03466 LysR substrate binding domain HCV84_007675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_007700 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCV84_007705 PF07037 Putative transcription regulator (DUF1323) HCV84_007710 PF07037 Putative transcription regulator (DUF1323) HCV84_007725 PF00563 EAL domain HCV84_007725 PF05231 MASE1 HCV84_007730 PF01773 Na+ dependent nucleoside transporter N-terminus HCV84_007730 PF07662 Na+ dependent nucleoside transporter C-terminus HCV84_007730 PF07670 Nucleoside recognition HCV84_007735 PF01566 Natural resistance-associated macrophage protein HCV84_007740 PF10697 Protein of unknown function (DUF2502) HCV84_007745 PF00248 Aldo/keto reductase family HCV84_007750 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_007750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_007750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_007755 PF00654 Voltage gated chloride channel HCV84_007760 PF02685 Glucokinase HCV84_007765 PF00072 Response regulator receiver domain HCV84_007765 PF04397 LytTr DNA-binding domain HCV84_007770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_007770 PF07694 5TMR of 5TMR-LYT HCV84_007770 PF06580 Histidine kinase HCV84_007785 PF00155 Aminotransferase class I and II HCV84_007795 PF07690 Major Facilitator Superfamily HCV84_007800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCV84_007805 PF03466 LysR substrate binding domain HCV84_007805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_007825 PF01226 Formate/nitrite transporter HCV84_007830 PF04333 MlaA lipoprotein HCV84_007835 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HCV84_007840 PF04175 Protein of unknown function (DUF406) HCV84_007845 PF02803 Thiolase, C-terminal domain HCV84_007845 PF00108 Thiolase, N-terminal domain HCV84_007850 PF00378 Enoyl-CoA hydratase/isomerase HCV84_007850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV84_007850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV84_007855 PF00300 Histidine phosphatase superfamily (branch 1) HCV84_007860 PF01713 Smr domain HCV84_007865 PF05175 Methyltransferase small domain HCV84_007870 PF01264 Chorismate synthase HCV84_007875 PF03411 Penicillin-insensitive murein endopeptidase HCV84_007880 PF01925 Sulfite exporter TauE/SafE HCV84_007885 PF04315 Elongation factor P hydroxylase HCV84_007890 PF08891 YfcL protein HCV84_007895 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HCV84_007895 PF01266 FAD dependent oxidoreductase HCV84_007900 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV84_007900 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV84_007905 PF07690 Major Facilitator Superfamily HCV84_007915 PF11890 Domain of unknown function (DUF3410) HCV84_007915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_007915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_007920 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV84_007920 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV84_007925 PF01416 tRNA pseudouridine synthase HCV84_007930 PF09335 SNARE associated Golgi protein HCV84_007935 PF01039 Carboxyl transferase domain HCV84_007935 PF17848 Acetyl-coA carboxylase zinc finger domain HCV84_007940 PF02875 Mur ligase family, glutamate ligase domain HCV84_007940 PF08245 Mur ligase middle domain HCV84_007945 PF05036 Sporulation related domain HCV84_007950 PF02674 Colicin V production protein HCV84_007955 PF00156 Phosphoribosyl transferase domain HCV84_007960 PF02441 Flavoprotein HCV84_007970 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_007975 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_007980 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_007985 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_007990 PF00005 ABC transporter HCV84_007995 PF13302 Acetyltransferase (GNAT) domain HCV84_008005 PF08338 Domain of unknown function (DUF1731) HCV84_008005 PF01370 NAD dependent epimerase/dehydratase family HCV84_008010 PF02152 Dihydroneopterin aldolase HCV84_008015 PF02798 Glutathione S-transferase, N-terminal domain HCV84_008015 PF00043 Glutathione S-transferase, C-terminal domain HCV84_008020 PF02798 Glutathione S-transferase, N-terminal domain HCV84_008020 PF14834 Glutathione S-transferase, C-terminal domain HCV84_008025 PF12850 Calcineurin-like phosphoesterase superfamily domain HCV84_008030 PF00293 NUDIX domain HCV84_008035 PF07085 DRTGG domain HCV84_008035 PF01515 Phosphate acetyl/butaryl transferase HCV84_008040 PF00871 Acetokinase family HCV84_008045 PF04217 Protein of unknown function, DUF412 HCV84_008050 PF03887 YfbU domain HCV84_008055 PF13419 Haloacid dehalogenase-like hydrolase HCV84_008060 PF03600 Citrate transporter HCV84_008060 PF02080 TrkA-C domain HCV84_008070 PF00155 Aminotransferase class I and II HCV84_008075 PF03466 LysR substrate binding domain HCV84_008075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_008080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HCV84_008085 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HCV84_008090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HCV84_008090 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HCV84_008100 PF10531 SLBB domain HCV84_008100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HCV84_008100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HCV84_008105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV84_008105 PF00384 Molybdopterin oxidoreductase HCV84_008105 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HCV84_008105 PF01568 Molydopterin dinucleotide binding domain HCV84_008110 PF00146 NADH dehydrogenase HCV84_008115 PF12838 4Fe-4S dicluster domain HCV84_008120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HCV84_008125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HCV84_008130 PF00361 Proton-conducting membrane transporter HCV84_008130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HCV84_008135 PF00361 Proton-conducting membrane transporter HCV84_008140 PF00361 Proton-conducting membrane transporter HCV84_008145 PF12706 Beta-lactamase superfamily domain HCV84_008150 PF13673 Acetyltransferase (GNAT) domain HCV84_008155 PF00425 chorismate binding enzyme HCV84_008160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_008160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_008160 PF16582 Middle domain of thiamine pyrophosphate HCV84_008165 PF12697 Alpha/beta hydrolase family HCV84_008170 PF00378 Enoyl-CoA hydratase/isomerase HCV84_008175 PF13378 Enolase C-terminal domain-like HCV84_008180 PF00501 AMP-binding enzyme HCV84_008180 PF13193 AMP-binding enzyme C-terminal domain HCV84_008185 PF00293 NUDIX domain HCV84_008190 PF04754 Putative transposase, YhgA-like HCV84_008195 PF07437 YfaZ precursor HCV84_008200 PF00994 Probable molybdopterin binding domain HCV84_008205 PF01614 Bacterial transcriptional regulator HCV84_008205 PF09339 IclR helix-turn-helix domain HCV84_008210 PF13378 Enolase C-terminal domain-like HCV84_008210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV84_008215 PF07690 Major Facilitator Superfamily HCV84_008220 PF03328 HpcH/HpaI aldolase/citrate lyase family HCV84_008225 PF02754 Cysteine-rich domain HCV84_008225 PF13183 4Fe-4S dicluster domain HCV84_008230 PF00890 FAD binding domain HCV84_008235 PF04324 BFD-like [2Fe-2S] binding domain HCV84_008235 PF01266 FAD dependent oxidoreductase HCV84_008240 PF07690 Major Facilitator Superfamily HCV84_008250 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_008255 PF00268 Ribonucleotide reductase, small chain HCV84_008260 PF02867 Ribonucleotide reductase, barrel domain HCV84_008260 PF03477 ATP cone domain HCV84_008260 PF00317 Ribonucleotide reductase, all-alpha domain HCV84_008270 PF03989 DNA gyrase C-terminal domain, beta-propeller HCV84_008270 PF00521 DNA gyrase/topoisomerase IV, subunit A HCV84_008275 PF00072 Response regulator receiver domain HCV84_008275 PF09456 RcsC Alpha-Beta-Loop (ABL) HCV84_008275 PF00512 His Kinase A (phospho-acceptor) domain HCV84_008275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_008280 PF00196 Bacterial regulatory proteins, luxR family HCV84_008280 PF00072 Response regulator receiver domain HCV84_008285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_008285 PF01627 Hpt domain HCV84_008285 PF16359 RcsD-ABL domain HCV84_008290 PF00267 Gram-negative porin HCV84_008295 PF02424 ApbE family HCV84_008300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV84_008300 PF02805 Metal binding domain of Ada HCV84_008300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCV84_008300 PF12833 Helix-turn-helix domain HCV84_008305 PF13532 2OG-Fe(II) oxygenase superfamily HCV84_008310 PF00005 ABC transporter HCV84_008315 PF01769 Divalent cation transporter HCV84_008315 PF00571 CBS domain HCV84_008315 PF03448 MgtE intracellular N domain HCV84_008320 PF00916 Sulfate permease family HCV84_008320 PF01740 STAS domain HCV84_008325 PF06039 Malate:quinone oxidoreductase (Mqo) HCV84_008330 PF03974 Ecotin HCV84_008335 PF01594 AI-2E family transporter HCV84_008345 PF00884 Sulfatase HCV84_008345 PF11893 Domain of unknown function (DUF3413) HCV84_008350 PF07208 Protein of unknown function (DUF1414) HCV84_008355 PF04245 37-kD nucleoid-associated bacterial protein HCV84_008360 PF08220 DeoR-like helix-turn-helix domain HCV84_008360 PF00455 DeoR C terminal sensor domain HCV84_008365 PF00293 NUDIX domain HCV84_008370 PF00144 Beta-lactamase HCV84_008380 PF01386 Ribosomal L25p family HCV84_008385 PF04851 Type III restriction enzyme, res subunit HCV84_008385 PF00271 Helicase conserved C-terminal domain HCV84_008390 PF00849 RNA pseudouridylate synthase HCV84_008390 PF01479 S4 domain HCV84_008395 PF07690 Major Facilitator Superfamily HCV84_008400 PF13989 YejG-like protein HCV84_008405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_008405 PF00005 ABC transporter HCV84_008410 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_008410 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_008415 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_008420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_008425 PF12792 CSS motif domain associated with EAL HCV84_008425 PF00563 EAL domain HCV84_008430 PF00877 NlpC/P60 family HCV84_008435 PF01569 PAP2 superfamily HCV84_008440 PF07683 Cobalamin synthesis protein cobW C-terminal domain HCV84_008440 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV84_008445 PF01232 Mannitol dehydrogenase Rossmann domain HCV84_008445 PF08125 Mannitol dehydrogenase C-terminal domain HCV84_008450 PF03786 D-mannonate dehydratase (UxuA) HCV84_008455 PF09285 Elongation factor P, C-terminal HCV84_008455 PF01132 Elongation factor P (EF-P) OB domain HCV84_008455 PF08207 Elongation factor P (EF-P) KOW-like domain HCV84_008460 PF03692 Putative zinc- or iron-chelating domain HCV84_008465 PF07690 Major Facilitator Superfamily HCV84_008470 PF00381 PTS HPr component phosphorylation site HCV84_008470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_008475 PF00294 pfkB family carbohydrate kinase HCV84_008480 PF02378 Phosphotransferase system, EIIC HCV84_008480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_008485 PF01261 Xylose isomerase-like TIM barrel HCV84_008490 PF03601 Conserved hypothetical protein 698 HCV84_008495 PF03466 LysR substrate binding domain HCV84_008495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_008500 PF00324 Amino acid permease HCV84_008505 PF00593 TonB dependent receptor HCV84_008505 PF07715 TonB-dependent Receptor Plug Domain HCV84_008510 PF00756 Putative esterase HCV84_008515 PF01227 GTP cyclohydrolase I HCV84_008520 PF04235 Protein of unknown function (DUF418) HCV84_008525 PF00356 Bacterial regulatory proteins, lacI family HCV84_008530 PF13407 Periplasmic binding protein domain HCV84_008535 PF00005 ABC transporter HCV84_008540 PF02653 Branched-chain amino acid transport system / permease component HCV84_008545 PF02698 DUF218 domain HCV84_008550 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HCV84_008550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCV84_008555 PF04172 LrgB-like family HCV84_008560 PF03788 LrgA family HCV84_008565 PF01207 Dihydrouridine synthase (Dus) HCV84_008570 PF04966 Carbohydrate-selective porin, OprB family HCV84_008575 PF03123 CAT RNA binding domain HCV84_008575 PF00874 PRD domain HCV84_008580 PF02378 Phosphotransferase system, EIIC HCV84_008580 PF00367 phosphotransferase system, EIIB HCV84_008580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCV84_008585 PF00232 Glycosyl hydrolase family 1 HCV84_008590 PF08241 Methyltransferase domain HCV84_008595 PF02321 Outer membrane efflux protein HCV84_008600 PF09335 SNARE associated Golgi protein HCV84_008605 PF04893 Yip1 domain HCV84_008610 PF00768 D-alanyl-D-alanine carboxypeptidase HCV84_008620 PF01565 FAD binding domain HCV84_008620 PF09330 D-lactate dehydrogenase, membrane binding HCV84_008625 PF00933 Glycosyl hydrolase family 3 N terminal domain HCV84_008625 PF14310 Fibronectin type III-like domain HCV84_008625 PF01915 Glycosyl hydrolase family 3 C-terminal domain HCV84_008630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCV84_008635 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_008640 PF00005 ABC transporter HCV84_008645 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_008655 PF07694 5TMR of 5TMR-LYT HCV84_008655 PF06580 Histidine kinase HCV84_008660 PF04397 LytTr DNA-binding domain HCV84_008660 PF00072 Response regulator receiver domain HCV84_008665 PF07308 Protein of unknown function (DUF1456) HCV84_008670 PF01588 Putative tRNA binding domain HCV84_008670 PF09334 tRNA synthetases class I (M) HCV84_008675 PF10609 NUBPL iron-transfer P-loop NTPase HCV84_008685 PF11776 Nickel/cobalt transporter regulator HCV84_008690 PF03466 LysR substrate binding domain HCV84_008690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_008695 PF00860 Permease family HCV84_008700 PF13382 Adenine deaminase C-terminal domain HCV84_008700 PF01979 Amidohydrolase family HCV84_008705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_008705 PF03466 LysR substrate binding domain HCV84_008715 PF02110 Hydroxyethylthiazole kinase family HCV84_008720 PF08543 Phosphomethylpyrimidine kinase HCV84_008725 PF01791 DeoC/LacD family aldolase HCV84_008730 PF07690 Major Facilitator Superfamily HCV84_008740 PF00106 short chain dehydrogenase HCV84_008745 PF00356 Bacterial regulatory proteins, lacI family HCV84_008750 PF04198 Putative sugar-binding domain HCV84_008755 PF01232 Mannitol dehydrogenase Rossmann domain HCV84_008755 PF08125 Mannitol dehydrogenase C-terminal domain HCV84_008760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_008760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_008765 PF07690 Major Facilitator Superfamily HCV84_008770 PF13419 Haloacid dehalogenase-like hydrolase HCV84_008775 PF13378 Enolase C-terminal domain-like HCV84_008775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV84_008780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_008785 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_008790 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_008790 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_008795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_008795 PF00005 ABC transporter HCV84_008800 PF00005 ABC transporter HCV84_008800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_008805 PF00781 Diacylglycerol kinase catalytic domain HCV84_008810 PF01136 Peptidase family U32 HCV84_008810 PF16325 Peptidase family U32 C-terminal domain HCV84_008815 PF00486 Transcriptional regulatory protein, C terminal HCV84_008815 PF00072 Response regulator receiver domain HCV84_008820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_008820 PF00672 HAMP domain HCV84_008820 PF00512 His Kinase A (phospho-acceptor) domain HCV84_008825 PF07690 Major Facilitator Superfamily HCV84_008830 PF00873 AcrB/AcrD/AcrF family HCV84_008835 PF00873 AcrB/AcrD/AcrF family HCV84_008845 PF00375 Sodium:dicarboxylate symporter family HCV84_008860 PF00072 Response regulator receiver domain HCV84_008860 PF00486 Transcriptional regulatory protein, C terminal HCV84_008865 PF13426 PAS domain HCV84_008865 PF00512 His Kinase A (phospho-acceptor) domain HCV84_008865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_008865 PF00672 HAMP domain HCV84_008870 PF00012 Hsp70 protein HCV84_008875 PF06029 AlkA N-terminal domain HCV84_008875 PF00730 HhH-GPD superfamily base excision DNA repair protein HCV84_008880 PF00485 Phosphoribulokinase / Uridine kinase family HCV84_008885 PF00692 dUTPase HCV84_008890 PF05170 AsmA family HCV84_008895 PF03741 Integral membrane protein TerC family HCV84_008895 PF00571 CBS domain HCV84_008895 PF03471 Transporter associated domain HCV84_008900 PF00483 Nucleotidyl transferase HCV84_008905 PF01569 PAP2 superfamily HCV84_008915 PF14052 Capsule assembly protein Wzi HCV84_008920 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HCV84_008920 PF10531 SLBB domain HCV84_008920 PF02563 Polysaccharide biosynthesis/export protein HCV84_008925 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCV84_008930 PF13614 AAA domain HCV84_008930 PF13807 G-rich domain on putative tyrosine kinase HCV84_008930 PF02706 Chain length determinant protein HCV84_008935 PF13439 Glycosyltransferase Family 4 HCV84_008935 PF00534 Glycosyl transferases group 1 HCV84_008940 PF00534 Glycosyl transferases group 1 HCV84_008940 PF13439 Glycosyltransferase Family 4 HCV84_008955 PF14667 Polysaccharide biosynthesis C-terminal domain HCV84_008965 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_008975 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCV84_008975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV84_008980 PF01050 Mannose-6-phosphate isomerase HCV84_008980 PF00483 Nucleotidyl transferase HCV84_008985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCV84_008985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCV84_008985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCV84_008985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCV84_008990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCV84_008990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCV84_008990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCV84_009000 PF01370 NAD dependent epimerase/dehydratase family HCV84_009005 PF01061 ABC-2 type transporter HCV84_009010 PF00005 ABC transporter HCV84_009030 PF13439 Glycosyltransferase Family 4 HCV84_009030 PF00534 Glycosyl transferases group 1 HCV84_009035 PF00535 Glycosyl transferase family 2 HCV84_009040 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HCV84_009040 PF01502 Phosphoribosyl-AMP cyclohydrolase HCV84_009045 PF00977 Histidine biosynthesis protein HCV84_009050 PF00977 Histidine biosynthesis protein HCV84_009055 PF00117 Glutamine amidotransferase class-I HCV84_009060 PF00475 Imidazoleglycerol-phosphate dehydratase HCV84_009060 PF08645 Polynucleotide kinase 3 phosphatase HCV84_009065 PF00155 Aminotransferase class I and II HCV84_009070 PF00815 Histidinol dehydrogenase HCV84_009075 PF01634 ATP phosphoribosyltransferase HCV84_009075 PF08029 HisG, C-terminal domain HCV84_009085 PF01370 NAD dependent epimerase/dehydratase family HCV84_009090 PF03466 LysR substrate binding domain HCV84_009090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_009100 PF13520 Amino acid permease HCV84_009105 PF01022 Bacterial regulatory protein, arsR family HCV84_009110 PF00679 Elongation factor G C-terminus HCV84_009110 PF14492 Elongation Factor G, domain II HCV84_009110 PF03764 Elongation factor G, domain IV HCV84_009110 PF03144 Elongation factor Tu domain 2 HCV84_009110 PF00009 Elongation factor Tu GTP binding domain HCV84_009115 PF00929 Exonuclease HCV84_009115 PF08411 Exonuclease C-terminal HCV84_009120 PF07943 Penicillin-binding protein 5, C-terminal domain HCV84_009120 PF00768 D-alanyl-D-alanine carboxypeptidase HCV84_009125 PF06445 GyrI-like small molecule binding domain HCV84_009130 PF04632 Fusaric acid resistance protein family HCV84_009135 PF04363 Protein of unknown function (DUF496) HCV84_009140 PF02654 Cobalamin-5-phosphate synthase HCV84_009145 PF02277 Phosphoribosyltransferase HCV84_009150 PF05221 S-adenosyl-L-homocysteine hydrolase HCV84_009150 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HCV84_009160 PF14552 Tautomerase enzyme HCV84_009165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_009165 PF03466 LysR substrate binding domain HCV84_009175 PF07690 Major Facilitator Superfamily HCV84_009175 PF00083 Sugar (and other) transporter HCV84_009185 PF13188 PAS domain HCV84_009185 PF00563 EAL domain HCV84_009185 PF00990 Diguanylate cyclase, GGDEF domain HCV84_009185 PF03707 Bacterial signalling protein N terminal repeat HCV84_009190 PF09313 Domain of unknown function (DUF1971) HCV84_009200 PF03466 LysR substrate binding domain HCV84_009200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_009210 PF00561 alpha/beta hydrolase fold HCV84_009215 PF00990 Diguanylate cyclase, GGDEF domain HCV84_009230 PF12161 HsdM N-terminal domain HCV84_009230 PF02384 N-6 DNA Methylase HCV84_009255 PF18818 Metallopeptidase superfamily domain HCV84_009255 PF08401 Domain of unknown function (DUF1738) HCV84_009255 PF13362 Toprim domain HCV84_009285 PF00437 Type II/IV secretion system protein HCV84_009290 PF13358 DDE superfamily endonuclease HCV84_009290 PF13592 Winged helix-turn helix HCV84_009295 PF03743 Bacterial conjugation TrbI-like protein HCV84_009300 PF03524 Conjugal transfer protein HCV84_009325 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HCV84_009330 PF04956 TrbC/VIRB2 family HCV84_009375 PF07715 TonB-dependent Receptor Plug Domain HCV84_009375 PF00593 TonB dependent receptor HCV84_009380 PF13193 AMP-binding enzyme C-terminal domain HCV84_009380 PF00501 AMP-binding enzyme HCV84_009385 PF00975 Thioesterase domain HCV84_009395 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV84_009395 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV84_009395 PF00550 Phosphopantetheine attachment site HCV84_009395 PF00698 Acyl transferase domain HCV84_009395 PF16197 Ketoacyl-synthetase C-terminal extension HCV84_009395 PF00668 Condensation domain HCV84_009400 PF00501 AMP-binding enzyme HCV84_009400 PF00668 Condensation domain HCV84_009400 PF08242 Methyltransferase domain HCV84_009400 PF00550 Phosphopantetheine attachment site HCV84_009410 PF08021 Siderophore-interacting FAD-binding domain HCV84_009410 PF04954 Siderophore-interacting protein HCV84_009410 PF00005 ABC transporter HCV84_009410 PF00664 ABC transporter transmembrane region HCV84_009415 PF00005 ABC transporter HCV84_009415 PF00664 ABC transporter transmembrane region HCV84_009420 PF07690 Major Facilitator Superfamily HCV84_009425 PF00425 chorismate binding enzyme HCV84_009430 PF00589 Phage integrase family HCV84_009430 PF13356 Arm DNA-binding domain HCV84_009440 PF01554 MatE HCV84_009450 PF00589 Phage integrase family HCV84_009450 PF13356 Arm DNA-binding domain HCV84_009460 PF18273 Type III R-M EcoP15I C-terminal domain HCV84_009460 PF01555 DNA methylase HCV84_009465 PF04851 Type III restriction enzyme, res subunit HCV84_009465 PF08774 VRR-NUC domain HCV84_009525 PF13592 Winged helix-turn helix HCV84_009525 PF13358 DDE superfamily endonuclease HCV84_009570 PF00816 H-NS histone family HCV84_009605 PF01048 Phosphorylase superfamily HCV84_009605 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HCV84_009615 PF12146 Serine aminopeptidase, S33 HCV84_009625 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_009625 PF00107 Zinc-binding dehydrogenase HCV84_009630 PF00440 Bacterial regulatory proteins, tetR family HCV84_009630 PF16925 Tetracyclin repressor-like, C-terminal domain HCV84_009635 PF00999 Sodium/hydrogen exchanger family HCV84_009645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_009645 PF03466 LysR substrate binding domain HCV84_009650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_009650 PF03466 LysR substrate binding domain HCV84_009655 PF17969 L,D-transpeptidase C-terminal domain HCV84_009655 PF03734 L,D-transpeptidase catalytic domain HCV84_009675 PF06167 Glucose-regulated metallo-peptidase M90 HCV84_009715 PF04381 Putative exonuclease, RdgC HCV84_009730 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HCV84_009750 PF02086 D12 class N6 adenine-specific DNA methyltransferase HCV84_009755 PF05866 Endodeoxyribonuclease RusA HCV84_009760 PF06147 Protein of unknown function (DUF968) HCV84_009950 PF00239 Resolvase, N terminal domain HCV84_009950 PF02796 Helix-turn-helix domain of resolvase HCV84_009955 PF00717 Peptidase S24-like HCV84_009965 PF00267 Gram-negative porin HCV84_009975 PF01966 HD domain HCV84_009980 PF18284 DNA methylase N-terminal domain HCV84_009980 PF00145 C-5 cytosine-specific DNA methylase HCV84_009985 PF03852 DNA mismatch endonuclease Vsr HCV84_009990 PF00892 EamA-like transporter family HCV84_009995 PF05661 Protein of unknown function (DUF808) HCV84_010000 PF17151 Periplasmic sensor domain HCV84_010000 PF00990 Diguanylate cyclase, GGDEF domain HCV84_010005 PF10733 Protein of unknown function (DUF2525) HCV84_010010 PF10781 Dextransucrase DSRB HCV84_010015 PF00196 Bacterial regulatory proteins, luxR family HCV84_010020 PF13987 YedD-like protein HCV84_010025 PF00128 Alpha amylase, catalytic domain HCV84_010025 PF02806 Alpha amylase, C-terminal all-beta domain HCV84_010030 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_010035 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_010040 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_010045 PF00005 ABC transporter HCV84_010050 PF00196 Bacterial regulatory proteins, luxR family HCV84_010050 PF03472 Autoinducer binding domain HCV84_010055 PF10769 Protein of unknown function (DUF2594) HCV84_010060 PF00072 Response regulator receiver domain HCV84_010060 PF00196 Bacterial regulatory proteins, luxR family HCV84_010065 PF08459 UvrC Helix-hairpin-helix N-terminal HCV84_010065 PF02151 UvrB/uvrC motif HCV84_010065 PF01541 GIY-YIG catalytic domain HCV84_010070 PF01066 CDP-alcohol phosphatidyltransferase HCV84_010090 PF00701 Dihydrodipicolinate synthetase family HCV84_010095 PF03695 Uncharacterised protein family (UPF0149) HCV84_010095 PF02810 SEC-C motif HCV84_010100 PF03222 Tryptophan/tyrosine permease family HCV84_010105 PF10678 Protein of unknown function (DUF2492) HCV84_010110 PF00210 Ferritin-like domain HCV84_010125 PF07690 Major Facilitator Superfamily HCV84_010130 PF10964 Protein of unknown function (DUF2766) HCV84_010145 PF00210 Ferritin-like domain HCV84_010155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV84_010160 PF00005 ABC transporter HCV84_010165 PF02653 Branched-chain amino acid transport system / permease component HCV84_010170 PF02358 Trehalose-phosphatase HCV84_010175 PF00982 Glycosyltransferase family 20 HCV84_010180 PF00582 Universal stress protein family HCV84_010190 PF07470 Glycosyl Hydrolase Family 88 HCV84_010195 PF03485 Arginyl tRNA synthetase N terminal domain HCV84_010195 PF00750 tRNA synthetases class I (R) HCV84_010195 PF05746 DALR anticodon binding domain HCV84_010200 PF06185 YecM protein HCV84_010205 PF03932 CutC family HCV84_010210 PF08003 Protein of unknown function (DUF1698) HCV84_010215 PF13649 Methyltransferase domain HCV84_010220 PF01124 MAPEG family HCV84_010225 PF01904 Protein of unknown function DUF72 HCV84_010230 PF00857 Isochorismatase family HCV84_010235 PF00152 tRNA synthetases class II (D, K and N) HCV84_010235 PF01336 OB-fold nucleic acid binding domain HCV84_010235 PF02938 GAD domain HCV84_010240 PF00293 NUDIX domain HCV84_010245 PF01709 Transcriptional regulator HCV84_010250 PF02075 Crossover junction endodeoxyribonuclease RuvC HCV84_010255 PF07499 RuvA, C-terminal domain HCV84_010255 PF01330 RuvA N terminal domain HCV84_010260 PF17864 RuvB AAA lid domain HCV84_010260 PF05496 Holliday junction DNA helicase RuvB P-loop domain HCV84_010260 PF05491 RuvB C-terminal winged helix domain HCV84_010265 PF00950 ABC 3 transport family HCV84_010270 PF00005 ABC transporter HCV84_010275 PF01297 Zinc-uptake complex component A periplasmic HCV84_010280 PF01551 Peptidase family M23 HCV84_010280 PF08525 Opacity-associated protein A N-terminal motif HCV84_010280 PF01476 LysM domain HCV84_010285 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV84_010290 PF02887 Pyruvate kinase, alpha/beta domain HCV84_010290 PF00224 Pyruvate kinase, barrel domain HCV84_010295 PF01380 SIS domain HCV84_010295 PF01418 Helix-turn-helix domain, rpiR family HCV84_010305 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HCV84_010305 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HCV84_010310 PF00920 Dehydratase family HCV84_010315 PF01081 KDPG and KHG aldolase HCV84_010320 PF02222 ATP-grasp domain HCV84_010325 PF07130 YebG protein HCV84_010330 PF04391 Protein of unknown function (DUF533) HCV84_010335 PF00326 Prolyl oligopeptidase family HCV84_010335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HCV84_010340 PF00929 Exonuclease HCV84_010345 PF06440 DNA polymerase III, theta subunit HCV84_010350 PF04234 CopC domain HCV84_010355 PF05425 Copper resistance protein D HCV84_010360 PF10709 Protein of unknown function (DUF2511) HCV84_010370 PF04393 Protein of unknown function (DUF535) HCV84_010375 PF00149 Calcineurin-like phosphoesterase HCV84_010380 PF07358 Protein of unknown function (DUF1482) HCV84_010385 PF07351 Protein of unknown function (DUF1480) HCV84_010390 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HCV84_010390 PF01189 16S rRNA methyltransferase RsmB/F HCV84_010390 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HCV84_010395 PF02470 MlaD protein HCV84_010400 PF04403 Paraquat-inducible protein A HCV84_010405 PF13185 GAF domain HCV84_010410 PF04352 ProQ/FINO family HCV84_010410 PF17516 ProQ C-terminal domain HCV84_010415 PF00595 PDZ domain HCV84_010415 PF17804 Tail specific protease N-terminal domain HCV84_010415 PF03572 Peptidase family S41 HCV84_010415 PF11818 C-terminal domain of tail specific protease (DUF3340) HCV84_010420 PF01435 Peptidase family M48 HCV84_010425 PF07690 Major Facilitator Superfamily HCV84_010430 PF09339 IclR helix-turn-helix domain HCV84_010430 PF01614 Bacterial transcriptional regulator HCV84_010435 PF13996 YobH-like protein HCV84_010440 PF13998 MgrB protein HCV84_010445 PF13974 YebO-like protein HCV84_010450 PF10736 Protein of unknown function (DUF2627) HCV84_010455 PF00313 'Cold-shock' DNA-binding domain HCV84_010460 PF03717 Penicillin-binding Protein dimerisation domain HCV84_010460 PF00905 Penicillin binding protein transpeptidase domain HCV84_010465 PF13847 Methyltransferase domain HCV84_010470 PF02659 Putative manganese efflux pump HCV84_010475 PF06173 Protein of unknown function (DUF986) HCV84_010480 PF03613 PTS system mannose/fructose/sorbose family IID component HCV84_010485 PF03609 PTS system sorbose-specific iic component HCV84_010490 PF03610 PTS system fructose IIA component HCV84_010490 PF03830 PTS system sorbose subfamily IIB component HCV84_010495 PF03741 Integral membrane protein TerC family HCV84_010495 PF03471 Transporter associated domain HCV84_010500 PF00563 EAL domain HCV84_010500 PF12792 CSS motif domain associated with EAL HCV84_010505 PF03313 Serine dehydratase alpha chain HCV84_010505 PF03315 Serine dehydratase beta chain HCV84_010515 PF04715 Anthranilate synthase component I, N terminal region HCV84_010515 PF00425 chorismate binding enzyme HCV84_010520 PF03701 Uncharacterised protein family (UPF0181) HCV84_010525 PF01042 Endoribonuclease L-PSP HCV84_010530 PF04851 Type III restriction enzyme, res subunit HCV84_010530 PF13307 Helicase C-terminal domain HCV84_010535 PF00814 Glycoprotease family HCV84_010540 PF03843 Outer membrane lipoprotein Slp family HCV84_010545 PF13193 AMP-binding enzyme C-terminal domain HCV84_010545 PF00501 AMP-binding enzyme HCV84_010550 PF00570 HRDC domain HCV84_010550 PF01612 3'-5' exonuclease HCV84_010555 PF03776 Septum formation topological specificity factor MinE HCV84_010560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HCV84_010565 PF05209 Septum formation inhibitor MinC, N-terminal domain HCV84_010565 PF03775 Septum formation inhibitor MinC, C-terminal domain HCV84_010570 PF05166 YcgL domain HCV84_010575 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV84_010580 PF03692 Putative zinc- or iron-chelating domain HCV84_010590 PF02600 Disulfide bond formation protein DsbB HCV84_010595 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HCV84_010600 PF00392 Bacterial regulatory proteins, gntR family HCV84_010600 PF07840 FadR C-terminal domain HCV84_010605 PF04293 SpoVR like protein HCV84_010615 PF01266 FAD dependent oxidoreductase HCV84_010620 PF00842 Alanine racemase, C-terminal domain HCV84_010620 PF01168 Alanine racemase, N-terminal domain HCV84_010625 PF03471 Transporter associated domain HCV84_010625 PF00999 Sodium/hydrogen exchanger family HCV84_010625 PF02080 TrkA-C domain HCV84_010630 PF17676 LD-carboxypeptidase C-terminal domain HCV84_010630 PF02016 LD-carboxypeptidase N-terminal domain HCV84_010635 PF01464 Transglycosylase SLT domain HCV84_010640 PF00593 TonB dependent receptor HCV84_010640 PF07715 TonB-dependent Receptor Plug Domain HCV84_010645 PF01204 Trehalase HCV84_010655 PF14403 Circularly permuted ATP-grasp type 2 HCV84_010700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_010700 PF03466 LysR substrate binding domain HCV84_010705 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_010710 PF03222 Tryptophan/tyrosine permease family HCV84_010715 PF00871 Acetokinase family HCV84_010720 PF01228 Glycine radical HCV84_010720 PF02901 Pyruvate formate lyase-like HCV84_010730 PF13458 Periplasmic binding protein HCV84_010735 PF02653 Branched-chain amino acid transport system / permease component HCV84_010740 PF02653 Branched-chain amino acid transport system / permease component HCV84_010740 PF11862 Domain of unknown function (DUF3382) HCV84_010745 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV84_010745 PF00005 ABC transporter HCV84_010750 PF00005 ABC transporter HCV84_010755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_010755 PF03466 LysR substrate binding domain HCV84_010760 PF01293 Phosphoenolpyruvate carboxykinase HCV84_010770 PF03466 LysR substrate binding domain HCV84_010770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_010775 PF07690 Major Facilitator Superfamily HCV84_010785 PF03466 LysR substrate binding domain HCV84_010785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_010795 PF00849 RNA pseudouridylate synthase HCV84_010800 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HCV84_010820 PF13488 Glycine zipper HCV84_010820 PF00691 OmpA family HCV84_010830 PF04717 Type VI secretion system, phage-baseplate injector HCV84_010830 PF13296 Putative type VI secretion system Rhs element Vgr HCV84_010830 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HCV84_010850 PF03781 Sulfatase-modifying factor enzyme 1 HCV84_010920 PF13407 Periplasmic binding protein domain HCV84_010930 PF01926 50S ribosome-binding GTPase HCV84_010930 PF06071 Protein of unknown function (DUF933) HCV84_010935 PF01195 Peptidyl-tRNA hydrolase HCV84_010940 PF10762 Protein of unknown function (DUF2583) HCV84_010950 PF01740 STAS domain HCV84_010950 PF00916 Sulfate permease family HCV84_010955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HCV84_010955 PF14572 Phosphoribosyl synthetase-associated domain HCV84_010960 PF08544 GHMP kinases C terminal HCV84_010960 PF00288 GHMP kinases N terminal domain HCV84_010965 PF03550 Outer membrane lipoprotein LolB HCV84_010970 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HCV84_010970 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HCV84_010970 PF01488 Shikimate / quinate 5-dehydrogenase HCV84_010975 PF00472 RF-1 domain HCV84_010975 PF03462 PCRF domain HCV84_010980 PF13847 Methyltransferase domain HCV84_010980 PF17827 PrmC N-terminal domain HCV84_010985 PF04247 Invasion gene expression up-regulator, SirB HCV84_010990 PF13369 Transglutaminase-like superfamily HCV84_010995 PF00793 DAHP synthetase I family HCV84_011000 PF01699 Sodium/calcium exchanger protein HCV84_011005 PF06150 ChaB HCV84_011010 PF04752 ChaC-like protein HCV84_011020 PF02635 DsrE/DsrF-like family HCV84_011025 PF03861 ANTAR domain HCV84_011025 PF08376 Nitrate and nitrite sensing HCV84_011035 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_011040 PF00005 ABC transporter HCV84_011045 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCV84_011045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCV84_011045 PF04324 BFD-like [2Fe-2S] binding domain HCV84_011045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCV84_011045 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_011045 PF13806 Rieske-like [2Fe-2S] domain HCV84_011050 PF04324 BFD-like [2Fe-2S] binding domain HCV84_011050 PF01568 Molydopterin dinucleotide binding domain HCV84_011050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV84_011050 PF00384 Molybdopterin oxidoreductase HCV84_011055 PF11924 Inverse autotransporter, beta-domain HCV84_011060 PF00196 Bacterial regulatory proteins, luxR family HCV84_011060 PF00072 Response regulator receiver domain HCV84_011065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_011065 PF07730 Histidine kinase HCV84_011065 PF00672 HAMP domain HCV84_011065 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HCV84_011070 PF07690 Major Facilitator Superfamily HCV84_011080 PF14710 Respiratory nitrate reductase alpha N-terminal HCV84_011080 PF01568 Molydopterin dinucleotide binding domain HCV84_011080 PF00384 Molybdopterin oxidoreductase HCV84_011085 PF13247 4Fe-4S dicluster domain HCV84_011085 PF14711 Respiratory nitrate reductase beta C-terminal HCV84_011090 PF02613 Nitrate reductase delta subunit HCV84_011095 PF02665 Nitrate reductase gamma subunit HCV84_011105 PF01037 Lrp/AsnC ligand binding domain HCV84_011140 PF01842 ACT domain HCV84_011140 PF00551 Formyl transferase HCV84_011145 PF02810 SEC-C motif HCV84_011150 PF01734 Patatin-like phospholipase HCV84_011155 PF00072 Response regulator receiver domain HCV84_011160 PF00483 Nucleotidyl transferase HCV84_011165 PF00816 H-NS histone family HCV84_011175 PF00265 Thymidine kinase HCV84_011180 PF00465 Iron-containing alcohol dehydrogenase HCV84_011180 PF00171 Aldehyde dehydrogenase family HCV84_011190 PF01914 MarC family integral membrane protein HCV84_011195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_011200 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_011205 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_011205 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_011210 PF00005 ABC transporter HCV84_011210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_011215 PF00005 ABC transporter HCV84_011215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_011220 PF00027 Cyclic nucleotide-binding domain HCV84_011220 PF00520 Ion transport protein HCV84_011225 PF04269 Protein of unknown function, DUF440 HCV84_011230 PF13396 Phospholipase_D-nuclease N-terminal HCV84_011230 PF13091 PLD-like domain HCV84_011240 PF04264 YceI-like domain HCV84_011250 PF03795 YCII-related domain HCV84_011255 PF03544 Gram-negative bacterial TonB protein C-terminal HCV84_011260 PF03881 Fructosamine kinase HCV84_011265 PF11080 Endoribonuclease GhoS HCV84_011270 PF00294 pfkB family carbohydrate kinase HCV84_011275 PF04338 Protein of unknown function, DUF481 HCV84_011285 PF03129 Anticodon binding domain HCV84_011285 PF02824 TGS domain HCV84_011285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCV84_011285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCV84_011290 PF05198 Translation initiation factor IF-3, N-terminal domain HCV84_011290 PF00707 Translation initiation factor IF-3, C-terminal domain HCV84_011295 PF01632 Ribosomal protein L35 HCV84_011300 PF00453 Ribosomal protein L20 HCV84_011310 PF01409 tRNA synthetases class II core domain (F) HCV84_011310 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HCV84_011315 PF01588 Putative tRNA binding domain HCV84_011315 PF03147 Ferredoxin-fold anticodon binding domain HCV84_011315 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HCV84_011315 PF03484 tRNA synthetase B5 domain HCV84_011315 PF03483 B3/4 domain HCV84_011320 PF00216 Bacterial DNA-binding protein HCV84_011330 PF01266 FAD dependent oxidoreductase HCV84_011335 PF03466 LysR substrate binding domain HCV84_011335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_011345 PF01032 FecCD transport family HCV84_011350 PF03180 NLPA lipoprotein HCV84_011355 PF00255 Glutathione peroxidase HCV84_011360 PF00005 ABC transporter HCV84_011365 PF00877 NlpC/P60 family HCV84_011370 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HCV84_011375 PF10636 Hemin uptake protein hemP HCV84_011380 PF00793 DAHP synthetase I family HCV84_011385 PF03618 Kinase/pyrophosphorylase HCV84_011395 PF00391 PEP-utilising enzyme, mobile domain HCV84_011395 PF02896 PEP-utilising enzyme, TIM barrel domain HCV84_011395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HCV84_011405 PF01594 AI-2E family transporter HCV84_011410 PF01565 FAD binding domain HCV84_011410 PF13183 4Fe-4S dicluster domain HCV84_011410 PF02913 FAD linked oxidases, C-terminal domain HCV84_011415 PF03061 Thioesterase superfamily HCV84_011420 PF04226 Transglycosylase associated protein HCV84_011435 PF01717 Cobalamin-independent synthase, Catalytic domain HCV84_011435 PF08267 Cobalamin-independent synthase, N-terminal domain HCV84_011440 PF07690 Major Facilitator Superfamily HCV84_011445 PF00005 ABC transporter HCV84_011450 PF01032 FecCD transport family HCV84_011460 PF03466 LysR substrate binding domain HCV84_011460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_011480 PF00873 AcrB/AcrD/AcrF family HCV84_011485 PF01070 FMN-dependent dehydrogenase HCV84_011490 PF00440 Bacterial regulatory proteins, tetR family HCV84_011510 PF01521 Iron-sulphur cluster biosynthesis HCV84_011515 PF01458 Uncharacterized protein family (UPF0051) HCV84_011520 PF00005 ABC transporter HCV84_011525 PF01458 Uncharacterized protein family (UPF0051) HCV84_011530 PF00266 Aminotransferase class-V HCV84_011535 PF02657 Fe-S metabolism associated domain HCV84_011540 PF17969 L,D-transpeptidase C-terminal domain HCV84_011540 PF01476 LysM domain HCV84_011540 PF03734 L,D-transpeptidase catalytic domain HCV84_011545 PF04728 Lipoprotein leucine-zipper HCV84_011550 PF00224 Pyruvate kinase, barrel domain HCV84_011550 PF02887 Pyruvate kinase, alpha/beta domain HCV84_011565 PF10965 Protein of unknown function (DUF2767) HCV84_011570 PF17926 Tetracyclin repressor-like, C-terminal domain HCV84_011570 PF00440 Bacterial regulatory proteins, tetR family HCV84_011575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV84_011575 PF01261 Xylose isomerase-like TIM barrel HCV84_011580 PF07690 Major Facilitator Superfamily HCV84_011585 PF08501 Shikimate dehydrogenase substrate binding domain HCV84_011585 PF01488 Shikimate / quinate 5-dehydrogenase HCV84_011585 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV84_011595 PF00005 ABC transporter HCV84_011600 PF01032 FecCD transport family HCV84_011605 PF01497 Periplasmic binding protein HCV84_011610 PF01614 Bacterial transcriptional regulator HCV84_011610 PF09339 IclR helix-turn-helix domain HCV84_011615 PF01494 FAD binding domain HCV84_011620 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HCV84_011625 PF12697 Alpha/beta hydrolase family HCV84_011630 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV84_011635 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HCV84_011635 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV84_011640 PF07836 DmpG-like communication domain HCV84_011640 PF00682 HMGL-like HCV84_011645 PF07690 Major Facilitator Superfamily HCV84_011650 PF02578 Multi-copper polyphenol oxidoreductase laccase HCV84_011660 PF05995 Cysteine dioxygenase type I HCV84_011665 PF03466 LysR substrate binding domain HCV84_011665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_011670 PF00296 Luciferase-like monooxygenase HCV84_011690 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_011695 PF00005 ABC transporter HCV84_011700 PF07715 TonB-dependent Receptor Plug Domain HCV84_011705 PF00005 ABC transporter HCV84_011710 PF01032 FecCD transport family HCV84_011715 PF01032 FecCD transport family HCV84_011730 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_011735 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_011740 PF00005 ABC transporter HCV84_011755 PF07690 Major Facilitator Superfamily HCV84_011780 PF00384 Molybdopterin oxidoreductase HCV84_011780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV84_011780 PF01568 Molydopterin dinucleotide binding domain HCV84_011785 PF02615 Malate/L-lactate dehydrogenase HCV84_011795 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_011800 PF00005 ABC transporter HCV84_011800 PF08402 TOBE domain HCV84_011805 PF18395 Cas3 C-terminal domain HCV84_011805 PF18019 HD domain HCV84_011825 PF09344 CT1975-like protein HCV84_011835 PF01867 CRISPR associated protein Cas1 HCV84_011840 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) HCV84_011870 PF13618 Gluconate 2-dehydrogenase subunit 3 HCV84_011875 PF00732 GMC oxidoreductase HCV84_011875 PF05199 GMC oxidoreductase HCV84_011880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCV84_011880 PF00034 Cytochrome c HCV84_011885 PF00005 ABC transporter HCV84_011890 PF03379 CcmB protein HCV84_011895 PF01578 Cytochrome C assembly protein HCV84_011905 PF03100 CcmE HCV84_011910 PF01578 Cytochrome C assembly protein HCV84_011910 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HCV84_011915 PF08534 Redoxin HCV84_011920 PF03918 Cytochrome C biogenesis protein HCV84_011940 PF00106 short chain dehydrogenase HCV84_011945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_011945 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_011945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_011950 PF03306 Alpha-acetolactate decarboxylase HCV84_011955 PF03466 LysR substrate binding domain HCV84_011955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_011960 PF00106 short chain dehydrogenase HCV84_011970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV84_011970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV84_011975 PF02803 Thiolase, C-terminal domain HCV84_011975 PF00108 Thiolase, N-terminal domain HCV84_011980 PF01144 Coenzyme A transferase HCV84_011985 PF01144 Coenzyme A transferase HCV84_011990 PF03466 LysR substrate binding domain HCV84_011990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012010 PF01565 FAD binding domain HCV84_012010 PF02913 FAD linked oxidases, C-terminal domain HCV84_012015 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_012020 PF00005 ABC transporter HCV84_012030 PF02633 Creatinine amidohydrolase HCV84_012035 PF01042 Endoribonuclease L-PSP HCV84_012040 PF07969 Amidohydrolase family HCV84_012045 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_012050 PF03466 LysR substrate binding domain HCV84_012050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012060 PF01979 Amidohydrolase family HCV84_012070 PF01975 Survival protein SurE HCV84_012080 PF00563 EAL domain HCV84_012080 PF12792 CSS motif domain associated with EAL HCV84_012090 PF00072 Response regulator receiver domain HCV84_012090 PF00486 Transcriptional regulatory protein, C terminal HCV84_012095 PF00672 HAMP domain HCV84_012095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_012095 PF00512 His Kinase A (phospho-acceptor) domain HCV84_012100 PF13533 Biotin-lipoyl like HCV84_012105 PF00873 AcrB/AcrD/AcrF family HCV84_012115 PF03466 LysR substrate binding domain HCV84_012115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012120 PF00563 EAL domain HCV84_012120 PF12792 CSS motif domain associated with EAL HCV84_012125 PF06004 Bacterial protein of unknown function (DUF903) HCV84_012160 PF07690 Major Facilitator Superfamily HCV84_012165 PF01261 Xylose isomerase-like TIM barrel HCV84_012170 PF01380 SIS domain HCV84_012170 PF01418 Helix-turn-helix domain, rpiR family HCV84_012175 PF00294 pfkB family carbohydrate kinase HCV84_012180 PF03466 LysR substrate binding domain HCV84_012180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012185 PF07690 Major Facilitator Superfamily HCV84_012205 PF00005 ABC transporter HCV84_012205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_012210 PF00005 ABC transporter HCV84_012210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_012215 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_012220 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_012225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_012235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV84_012240 PF00455 DeoR C terminal sensor domain HCV84_012240 PF08220 DeoR-like helix-turn-helix domain HCV84_012250 PF00484 Carbonic anhydrase HCV84_012275 PF00753 Metallo-beta-lactamase superfamily HCV84_012275 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HCV84_012275 PF10996 Beta-Casp domain HCV84_012285 PF03466 LysR substrate binding domain HCV84_012285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012295 PF00106 short chain dehydrogenase HCV84_012320 PF03641 Possible lysine decarboxylase HCV84_012330 PF01554 MatE HCV84_012335 PF00677 Lumazine binding domain HCV84_012345 PF07690 Major Facilitator Superfamily HCV84_012350 PF03466 LysR substrate binding domain HCV84_012350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012355 PF00356 Bacterial regulatory proteins, lacI family HCV84_012365 PF07690 Major Facilitator Superfamily HCV84_012370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCV84_012370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCV84_012380 PF00877 NlpC/P60 family HCV84_012385 PF00462 Glutaredoxin HCV84_012390 PF00929 Exonuclease HCV84_012395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV84_012400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV84_012405 PF00440 Bacterial regulatory proteins, tetR family HCV84_012405 PF16925 Tetracyclin repressor-like, C-terminal domain HCV84_012410 PF06945 Protein of unknown function (DUF1289) HCV84_012415 PF00248 Aldo/keto reductase family HCV84_012420 PF00080 Copper/zinc superoxide dismutase (SODC) HCV84_012425 PF04632 Fusaric acid resistance protein family HCV84_012430 PF00529 HlyD membrane-fusion protein of T1SS HCV84_012430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_012435 PF07869 Protein of unknown function (DUF1656) HCV84_012440 PF01047 MarR family HCV84_012445 PF17158 Membrane-associated sensor, integral membrane domain HCV84_012445 PF00990 Diguanylate cyclase, GGDEF domain HCV84_012450 PF05433 Glycine zipper 2TM domain HCV84_012455 PF03702 Anhydro-N-acetylmuramic acid kinase HCV84_012460 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HCV84_012465 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HCV84_012465 PF01243 Pyridoxamine 5'-phosphate oxidase HCV84_012470 PF00579 tRNA synthetases class I (W and Y) HCV84_012475 PF08543 Phosphomethylpyrimidine kinase HCV84_012480 PF00043 Glutathione S-transferase, C-terminal domain HCV84_012480 PF02798 Glutathione S-transferase, N-terminal domain HCV84_012485 PF00854 POT family HCV84_012490 PF00730 HhH-GPD superfamily base excision DNA repair protein HCV84_012490 PF10576 Iron-sulfur binding domain of endonuclease III HCV84_012490 PF00633 Helix-hairpin-helix motif HCV84_012495 PF02508 Rnf-Nqr subunit, membrane protein HCV84_012500 PF04205 FMN-binding domain HCV84_012505 PF03116 NQR2, RnfD, RnfE family HCV84_012510 PF13375 RnfC Barrel sandwich hybrid domain HCV84_012510 PF12838 4Fe-4S dicluster domain HCV84_012510 PF10531 SLBB domain HCV84_012510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HCV84_012515 PF04060 Putative Fe-S cluster HCV84_012520 PF02508 Rnf-Nqr subunit, membrane protein HCV84_012525 PF10754 Protein of unknown function (DUF2569) HCV84_012530 PF05321 Haemolysin expression modulating protein HCV84_012535 PF00232 Glycosyl hydrolase family 1 HCV84_012545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_012545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_012550 PF00962 Adenosine/AMP deaminase HCV84_012555 PF07690 Major Facilitator Superfamily HCV84_012560 PF01638 HxlR-like helix-turn-helix HCV84_012575 PF01292 Prokaryotic cytochrome b561 HCV84_012580 PF02583 Metal-sensitive transcriptional repressor HCV84_012585 PF00107 Zinc-binding dehydrogenase HCV84_012585 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_012590 PF01011 PQQ enzyme repeat HCV84_012595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012595 PF03466 LysR substrate binding domain HCV84_012600 PF00775 Dioxygenase HCV84_012605 PF00775 Dioxygenase HCV84_012605 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HCV84_012610 PF07063 Domain of unknown function (DUF1338) HCV84_012615 PF00135 Carboxylesterase family HCV84_012620 PF00107 Zinc-binding dehydrogenase HCV84_012620 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_012625 PF04349 Periplasmic glucan biosynthesis protein, MdoG HCV84_012630 PF13302 Acetyltransferase (GNAT) domain HCV84_012635 PF18836 Beta solenoid repeat from YDCK HCV84_012640 PF03595 Voltage-dependent anion channel HCV84_012645 PF03848 Tellurite resistance protein TehB HCV84_012650 PF11769 Protein of unknown function (DUF3313) HCV84_012655 PF00892 EamA-like transporter family HCV84_012660 PF06445 GyrI-like small molecule binding domain HCV84_012660 PF12833 Helix-turn-helix domain HCV84_012665 PF03594 Benzoate membrane transport protein HCV84_012670 PF01381 Helix-turn-helix HCV84_012670 PF07883 Cupin domain HCV84_012680 PF12392 Collagenase HCV84_012680 PF01136 Peptidase family U32 HCV84_012700 PF02322 Cytochrome bd terminal oxidase subunit II HCV84_012705 PF01654 Cytochrome bd terminal oxidase subunit I HCV84_012710 PF00392 Bacterial regulatory proteins, gntR family HCV84_012710 PF00155 Aminotransferase class I and II HCV84_012715 PF13416 Bacterial extracellular solute-binding protein HCV84_012720 PF00005 ABC transporter HCV84_012720 PF08402 TOBE domain HCV84_012725 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_012730 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_012735 PF00171 Aldehyde dehydrogenase family HCV84_012760 PF10753 Toxin GhoT_OrtT HCV84_012765 PF00364 Biotin-requiring enzyme HCV84_012765 PF00561 alpha/beta hydrolase fold HCV84_012770 PF00171 Aldehyde dehydrogenase family HCV84_012775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_012780 PF10735 Protein of unknown function (DUF2526) HCV84_012785 PF04657 Putative inner membrane exporter, YdcZ HCV84_012790 PF00583 Acetyltransferase (GNAT) family HCV84_012795 PF08671 Anti-repressor SinI HCV84_012795 PF01381 Helix-turn-helix HCV84_012800 PF16884 N-terminal domain of oxidoreductase HCV84_012800 PF00107 Zinc-binding dehydrogenase HCV84_012805 PF01156 Inosine-uridine preferring nucleoside hydrolase HCV84_012815 PF04175 Protein of unknown function (DUF406) HCV84_012820 PF01979 Amidohydrolase family HCV84_012825 PF07715 TonB-dependent Receptor Plug Domain HCV84_012825 PF00593 TonB dependent receptor HCV84_012840 PF00324 Amino acid permease HCV84_012845 PF03466 LysR substrate binding domain HCV84_012845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_012850 PF01202 Shikimate kinase HCV84_012855 PF00296 Luciferase-like monooxygenase HCV84_012860 PF07687 Peptidase dimerisation domain HCV84_012860 PF01546 Peptidase family M20/M25/M40 HCV84_012865 PF00296 Luciferase-like monooxygenase HCV84_012870 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_012880 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_012885 PF00005 ABC transporter HCV84_012895 PF13417 Glutathione S-transferase, N-terminal domain HCV84_012900 PF01361 Tautomerase enzyme HCV84_012910 PF11471 Maltoporin periplasmic N-terminal extension HCV84_012910 PF02264 LamB porin HCV84_012925 PF02311 AraC-like ligand binding domain HCV84_012925 PF12833 Helix-turn-helix domain HCV84_012930 PF01613 Flavin reductase like domain HCV84_012935 PF00005 ABC transporter HCV84_012935 PF17912 MalK OB fold domain HCV84_012945 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_012950 PF00797 N-acetyltransferase HCV84_012955 PF02665 Nitrate reductase gamma subunit HCV84_012960 PF02613 Nitrate reductase delta subunit HCV84_012965 PF14711 Respiratory nitrate reductase beta C-terminal HCV84_012965 PF13247 4Fe-4S dicluster domain HCV84_012970 PF01568 Molydopterin dinucleotide binding domain HCV84_012970 PF14710 Respiratory nitrate reductase alpha N-terminal HCV84_012970 PF00384 Molybdopterin oxidoreductase HCV84_012975 PF07690 Major Facilitator Superfamily HCV84_012985 PF07690 Major Facilitator Superfamily HCV84_012990 PF09339 IclR helix-turn-helix domain HCV84_012990 PF01614 Bacterial transcriptional regulator HCV84_012995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV84_012995 PF13378 Enolase C-terminal domain-like HCV84_013000 PF02426 Muconolactone delta-isomerase HCV84_013005 PF04444 Catechol dioxygenase N terminus HCV84_013005 PF00775 Dioxygenase HCV84_013010 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HCV84_013010 PF00355 Rieske [2Fe-2S] domain HCV84_013015 PF00866 Ring hydroxylating beta subunit HCV84_013020 PF00175 Oxidoreductase NAD-binding domain HCV84_013020 PF00970 Oxidoreductase FAD-binding domain HCV84_013020 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_013025 PF00106 short chain dehydrogenase HCV84_013030 PF00892 EamA-like transporter family HCV84_013040 PF09163 Formate dehydrogenase N, transmembrane HCV84_013040 PF13247 4Fe-4S dicluster domain HCV84_013040 PF12800 4Fe-4S binding domain HCV84_013045 PF01292 Prokaryotic cytochrome b561 HCV84_013060 PF03976 Polyphosphate kinase 2 (PPK2) HCV84_013070 PF07690 Major Facilitator Superfamily HCV84_013080 PF00296 Luciferase-like monooxygenase HCV84_013085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_013085 PF00005 ABC transporter HCV84_013090 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_013090 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_013095 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_013100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_013105 PF00107 Zinc-binding dehydrogenase HCV84_013105 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_013110 PF00719 Inorganic pyrophosphatase HCV84_013120 PF12848 ABC transporter HCV84_013120 PF00005 ABC transporter HCV84_013130 PF03949 Malic enzyme, NAD binding domain HCV84_013130 PF00390 Malic enzyme, N-terminal domain HCV84_013140 PF08136 30S ribosomal protein subunit S22 family HCV84_013150 PF03466 LysR substrate binding domain HCV84_013150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013155 PF10820 Protein of unknown function (DUF2543) HCV84_013165 PF10685 Stress-induced bacterial acidophilic repeat motif HCV84_013175 PF05974 Domain of unknown function (DUF892) HCV84_013185 PF00128 Alpha amylase, catalytic domain HCV84_013185 PF16657 Maltogenic Amylase, C-terminal domain HCV84_013190 PF00106 short chain dehydrogenase HCV84_013195 PF04239 Protein of unknown function (DUF421) HCV84_013205 PF04076 Bacterial OB fold (BOF) protein HCV84_013215 PF02566 OsmC-like protein HCV84_013235 PF01545 Cation efflux family HCV84_013235 PF16916 Dimerisation domain of Zinc Transporter HCV84_013240 PF01062 Bestrophin, RFP-TM, chloride channel HCV84_013245 PF00384 Molybdopterin oxidoreductase HCV84_013250 PF03466 LysR substrate binding domain HCV84_013250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013255 PF02378 Phosphotransferase system, EIIC HCV84_013280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_013285 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV84_013290 PF00083 Sugar (and other) transporter HCV84_013295 PF02308 MgtC family HCV84_013300 PF03969 AFG1-like ATPase HCV84_013305 PF00141 Peroxidase HCV84_013315 PF00905 Penicillin binding protein transpeptidase domain HCV84_013315 PF03717 Penicillin-binding Protein dimerisation domain HCV84_013320 PF00117 Glutamine amidotransferase class-I HCV84_013320 PF02540 NAD synthase HCV84_013320 PF00958 GMP synthase C terminal domain HCV84_013325 PF00675 Insulinase (Peptidase family M16) HCV84_013330 PF04055 Radical SAM superfamily HCV84_013330 PF13186 Iron-sulfur cluster-binding domain HCV84_013335 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HCV84_013340 PF03070 TENA/THI-4/PQQC family HCV84_013345 PF12706 Beta-lactamase superfamily domain HCV84_013350 PF08042 PqqA family HCV84_013355 PF01244 Membrane dipeptidase (Peptidase family M19) HCV84_013360 PF00561 alpha/beta hydrolase fold HCV84_013365 PF00486 Transcriptional regulatory protein, C terminal HCV84_013365 PF00072 Response regulator receiver domain HCV84_013370 PF00512 His Kinase A (phospho-acceptor) domain HCV84_013370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_013370 PF00672 HAMP domain HCV84_013375 PF17991 Thioredoxin like C-terminal domain HCV84_013375 PF02683 Cytochrome C biogenesis protein transmembrane region HCV84_013375 PF00578 AhpC/TSA family HCV84_013385 PF00282 Pyridoxal-dependent decarboxylase conserved domain HCV84_013390 PF00202 Aminotransferase class-III HCV84_013395 PF09084 NMT1/THI5 like HCV84_013400 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_013405 PF00005 ABC transporter HCV84_013410 PF03070 TENA/THI-4/PQQC family HCV84_013425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_013425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_013435 PF00356 Bacterial regulatory proteins, lacI family HCV84_013440 PF08448 PAS fold HCV84_013440 PF00990 Diguanylate cyclase, GGDEF domain HCV84_013445 PF01979 Amidohydrolase family HCV84_013450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCV84_013485 PF00561 alpha/beta hydrolase fold HCV84_013490 PF00117 Glutamine amidotransferase class-I HCV84_013495 PF02311 AraC-like ligand binding domain HCV84_013495 PF12833 Helix-turn-helix domain HCV84_013510 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV84_013510 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV84_013515 PF07690 Major Facilitator Superfamily HCV84_013535 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV84_013535 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV84_013550 PF01425 Amidase HCV84_013575 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_013580 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_013585 PF00005 ABC transporter HCV84_013590 PF00266 Aminotransferase class-V HCV84_013595 PF07687 Peptidase dimerisation domain HCV84_013595 PF01546 Peptidase family M20/M25/M40 HCV84_013600 PF03060 Nitronate monooxygenase HCV84_013605 PF03466 LysR substrate binding domain HCV84_013605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV84_013620 PF13454 FAD-NAD(P)-binding HCV84_013625 PF07690 Major Facilitator Superfamily HCV84_013625 PF00083 Sugar (and other) transporter HCV84_013640 PF00440 Bacterial regulatory proteins, tetR family HCV84_013655 PF07690 Major Facilitator Superfamily HCV84_013665 PF00356 Bacterial regulatory proteins, lacI family HCV84_013670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_013680 PF03611 PTS system sugar-specific permease component HCV84_013685 PF00834 Ribulose-phosphate 3 epimerase family HCV84_013695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_013700 PF02378 Phosphotransferase system, EIIC HCV84_013700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_013705 PF01810 LysE type translocator HCV84_013715 PF03466 LysR substrate binding domain HCV84_013715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013720 PF03466 LysR substrate binding domain HCV84_013720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013725 PF00753 Metallo-beta-lactamase superfamily HCV84_013735 PF07687 Peptidase dimerisation domain HCV84_013735 PF01546 Peptidase family M20/M25/M40 HCV84_013745 PF02126 Phosphotriesterase family HCV84_013750 PF02653 Branched-chain amino acid transport system / permease component HCV84_013755 PF00005 ABC transporter HCV84_013760 PF00356 Bacterial regulatory proteins, lacI family HCV84_013770 PF00294 pfkB family carbohydrate kinase HCV84_013790 PF01476 LysM domain HCV84_013790 PF04972 BON domain HCV84_013795 PF07690 Major Facilitator Superfamily HCV84_013805 PF00512 His Kinase A (phospho-acceptor) domain HCV84_013805 PF00672 HAMP domain HCV84_013805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_013810 PF14532 Sigma-54 interaction domain HCV84_013810 PF00072 Response regulator receiver domain HCV84_013810 PF02954 Bacterial regulatory protein, Fis family HCV84_013815 PF04229 GrpB protein HCV84_013815 PF13673 Acetyltransferase (GNAT) domain HCV84_013820 PF03466 LysR substrate binding domain HCV84_013820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013825 PF00248 Aldo/keto reductase family HCV84_013830 PF00248 Aldo/keto reductase family HCV84_013835 PF08450 SMP-30/Gluconolactonase/LRE-like region HCV84_013840 PF00248 Aldo/keto reductase family HCV84_013875 PF01042 Endoribonuclease L-PSP HCV84_013880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013880 PF03466 LysR substrate binding domain HCV84_013885 PF01053 Cys/Met metabolism PLP-dependent enzyme HCV84_013890 PF00155 Aminotransferase class I and II HCV84_013895 PF03222 Tryptophan/tyrosine permease family HCV84_013900 PF03466 LysR substrate binding domain HCV84_013900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013910 PF02322 Cytochrome bd terminal oxidase subunit II HCV84_013915 PF01654 Cytochrome bd terminal oxidase subunit I HCV84_013925 PF00085 Thioredoxin HCV84_013930 PF00107 Zinc-binding dehydrogenase HCV84_013930 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_013945 PF02627 Carboxymuconolactone decarboxylase family HCV84_013955 PF03466 LysR substrate binding domain HCV84_013955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_013960 PF00501 AMP-binding enzyme HCV84_013960 PF13193 AMP-binding enzyme C-terminal domain HCV84_013965 PF01144 Coenzyme A transferase HCV84_013975 PF02803 Thiolase, C-terminal domain HCV84_013975 PF00108 Thiolase, N-terminal domain HCV84_013980 PF07690 Major Facilitator Superfamily HCV84_013985 PF08450 SMP-30/Gluconolactonase/LRE-like region HCV84_013995 PF02595 Glycerate kinase family HCV84_014000 PF17853 GGDEF-like domain HCV84_014000 PF13556 PucR C-terminal helix-turn-helix domain HCV84_014000 PF05651 Putative sugar diacid recognition HCV84_014005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCV84_014005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV84_014010 PF03466 LysR substrate binding domain HCV84_014010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_014020 PF00392 Bacterial regulatory proteins, gntR family HCV84_014020 PF07729 FCD domain HCV84_014025 PF00367 phosphotransferase system, EIIB HCV84_014025 PF02378 Phosphotransferase system, EIIC HCV84_014030 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV84_014030 PF02056 Family 4 glycosyl hydrolase HCV84_014035 PF00083 Sugar (and other) transporter HCV84_014040 PF00381 PTS HPr component phosphorylation site HCV84_014040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_014055 PF00756 Putative esterase HCV84_014060 PF00563 EAL domain HCV84_014060 PF00990 Diguanylate cyclase, GGDEF domain HCV84_014060 PF13188 PAS domain HCV84_014060 PF03707 Bacterial signalling protein N terminal repeat HCV84_014075 PF00557 Metallopeptidase family M24 HCV84_014090 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_014090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_014095 PF13954 PapC N-terminal domain HCV84_014095 PF00577 Outer membrane usher protein HCV84_014095 PF13953 PapC C-terminal domain HCV84_014105 PF02638 Glycosyl hydrolase-like 10 HCV84_014110 PF13657 HipA N-terminal domain HCV84_014110 PF07804 HipA-like C-terminal domain HCV84_014115 PF01381 Helix-turn-helix HCV84_014120 PF00576 HIUase/Transthyretin family HCV84_014125 PF01014 Uricase HCV84_014125 PF09349 OHCU decarboxylase HCV84_014130 PF00860 Permease family HCV84_014135 PF01494 FAD binding domain HCV84_014140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_014140 PF03466 LysR substrate binding domain HCV84_014145 PF00355 Rieske [2Fe-2S] domain HCV84_014150 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_014155 PF07690 Major Facilitator Superfamily HCV84_014160 PF12833 Helix-turn-helix domain HCV84_014175 PF09905 DNA-binding protein VF530 HCV84_014185 PF03180 NLPA lipoprotein HCV84_014190 PF00005 ABC transporter HCV84_014190 PF09383 NIL domain HCV84_014195 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_014200 PF03060 Nitronate monooxygenase HCV84_014205 PF03466 LysR substrate binding domain HCV84_014205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_014210 PF06779 Uncharacterised MFS-type transporter YbfB HCV84_014220 PF07690 Major Facilitator Superfamily HCV84_014230 PF13649 Methyltransferase domain HCV84_014260 PF00583 Acetyltransferase (GNAT) family HCV84_014265 PF01232 Mannitol dehydrogenase Rossmann domain HCV84_014265 PF08125 Mannitol dehydrogenase C-terminal domain HCV84_014275 PF00990 Diguanylate cyclase, GGDEF domain HCV84_014280 PF13811 Domain of unknown function (DUF4186) HCV84_014285 PF04960 Glutaminase HCV84_014290 PF00171 Aldehyde dehydrogenase family HCV84_014295 PF03466 LysR substrate binding domain HCV84_014295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_014300 PF00583 Acetyltransferase (GNAT) family HCV84_014305 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCV84_014305 PF00056 lactate/malate dehydrogenase, NAD binding domain HCV84_014310 PF00455 DeoR C terminal sensor domain HCV84_014310 PF08220 DeoR-like helix-turn-helix domain HCV84_014315 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HCV84_014320 PF07005 Sugar-binding N-terminal domain HCV84_014320 PF17042 Nucleotide-binding C-terminal domain HCV84_014325 PF00465 Iron-containing alcohol dehydrogenase HCV84_014330 PF00701 Dihydrodipicolinate synthetase family HCV84_014335 PF01842 ACT domain HCV84_014335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_014335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_014340 PF07690 Major Facilitator Superfamily HCV84_014345 PF02567 Phenazine biosynthesis-like protein HCV84_014350 PF07690 Major Facilitator Superfamily HCV84_014355 PF01914 MarC family integral membrane protein HCV84_014365 PF01047 MarR family HCV84_014370 PF12833 Helix-turn-helix domain HCV84_014375 PF13999 MarB protein HCV84_014380 PF00892 EamA-like transporter family HCV84_014385 PF07690 Major Facilitator Superfamily HCV84_014395 PF00005 ABC transporter HCV84_014400 PF00005 ABC transporter HCV84_014400 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV84_014405 PF02653 Branched-chain amino acid transport system / permease component HCV84_014410 PF02653 Branched-chain amino acid transport system / permease component HCV84_014415 PF13458 Periplasmic binding protein HCV84_014420 PF01717 Cobalamin-independent synthase, Catalytic domain HCV84_014430 PF12833 Helix-turn-helix domain HCV84_014430 PF01965 DJ-1/PfpI family HCV84_014445 PF00356 Bacterial regulatory proteins, lacI family HCV84_014450 PF02837 Glycosyl hydrolases family 2, sugar binding domain HCV84_014450 PF02929 Beta galactosidase small chain HCV84_014450 PF16353 Domain of unknown function(DUF4981) HCV84_014450 PF00703 Glycosyl hydrolases family 2 HCV84_014450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HCV84_014455 PF01306 LacY proton/sugar symporter HCV84_014460 PF02463 RecF/RecN/SMC N terminal domain HCV84_014475 PF08220 DeoR-like helix-turn-helix domain HCV84_014475 PF00455 DeoR C terminal sensor domain HCV84_014480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCV84_014480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV84_014485 PF07005 Sugar-binding N-terminal domain HCV84_014485 PF17042 Nucleotide-binding C-terminal domain HCV84_014490 PF00596 Class II Aldolase and Adducin N-terminal domain HCV84_014495 PF01261 Xylose isomerase-like TIM barrel HCV84_014500 PF02447 GntP family permease HCV84_014505 PF12833 Helix-turn-helix domain HCV84_014520 PF04940 Sensors of blue-light using FAD HCV84_014520 PF00563 EAL domain HCV84_014525 PF02464 Competence-damaged protein HCV84_014530 PF00011 Hsp20/alpha crystallin family HCV84_014550 PF00072 Response regulator receiver domain HCV84_014550 PF00196 Bacterial regulatory proteins, luxR family HCV84_014565 PF02586 SOS response associated peptidase (SRAP) HCV84_014570 PF12833 Helix-turn-helix domain HCV84_014570 PF02311 AraC-like ligand binding domain HCV84_014580 PF01432 Peptidase family M3 HCV84_014585 PF00106 short chain dehydrogenase HCV84_014590 PF07729 FCD domain HCV84_014590 PF00392 Bacterial regulatory proteins, gntR family HCV84_014595 PF00582 Universal stress protein family HCV84_014600 PF01232 Mannitol dehydrogenase Rossmann domain HCV84_014600 PF08125 Mannitol dehydrogenase C-terminal domain HCV84_014605 PF07690 Major Facilitator Superfamily HCV84_014615 PF06932 Protein of unknown function (DUF1283) HCV84_014620 PF13302 Acetyltransferase (GNAT) domain HCV84_014625 PF06788 Uncharacterised protein family (UPF0257) HCV84_014630 PF06649 Protein of unknown function (DUF1161) HCV84_014635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV84_014635 PF00384 Molybdopterin oxidoreductase HCV84_014635 PF01568 Molydopterin dinucleotide binding domain HCV84_014640 PF12800 4Fe-4S binding domain HCV84_014640 PF13247 4Fe-4S dicluster domain HCV84_014645 PF04976 DMSO reductase anchor subunit (DmsC) HCV84_014650 PF02613 Nitrate reductase delta subunit HCV84_014655 PF00654 Voltage gated chloride channel HCV84_014665 PF00480 ROK family HCV84_014670 PF03466 LysR substrate binding domain HCV84_014670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_014675 PF07690 Major Facilitator Superfamily HCV84_014680 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HCV84_014690 PF00089 Trypsin HCV84_014700 PF00893 Small Multidrug Resistance protein HCV84_014705 PF00893 Small Multidrug Resistance protein HCV84_014710 PF01594 AI-2E family transporter HCV84_014715 PF16957 Malonate decarboxylase, alpha subunit, transporter HCV84_014720 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HCV84_014725 PF06857 Malonate decarboxylase delta subunit (MdcD) HCV84_014730 PF01039 Carboxyl transferase domain HCV84_014740 PF03547 Membrane transport protein HCV84_014745 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HCV84_014750 PF00698 Acyl transferase domain HCV84_014755 PF03466 LysR substrate binding domain HCV84_014755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_014760 PF06039 Malate:quinone oxidoreductase (Mqo) HCV84_014765 PF13580 SIS domain HCV84_014775 PF00989 PAS fold HCV84_014775 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCV84_014775 PF17203 Single cache domain 3 HCV84_014775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_014780 PF00072 Response regulator receiver domain HCV84_014785 PF02424 ApbE family HCV84_014790 PF14537 Cytochrome c3 HCV84_014790 PF00890 FAD binding domain HCV84_014795 PF00939 Sodium:sulfate symporter transmembrane region HCV84_014800 PF05683 Fumarase C-terminus HCV84_014800 PF05681 Fumarate hydratase (Fumerase) HCV84_014810 PF02627 Carboxymuconolactone decarboxylase family HCV84_014815 PF12146 Serine aminopeptidase, S33 HCV84_014820 PF10397 Adenylosuccinate lyase C-terminus HCV84_014820 PF00206 Lyase HCV84_014825 PF02803 Thiolase, C-terminal domain HCV84_014825 PF00108 Thiolase, N-terminal domain HCV84_014830 PF01144 Coenzyme A transferase HCV84_014835 PF01144 Coenzyme A transferase HCV84_014840 PF09339 IclR helix-turn-helix domain HCV84_014840 PF01614 Bacterial transcriptional regulator HCV84_014845 PF01713 Smr domain HCV84_014850 PF03466 LysR substrate binding domain HCV84_014850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_014855 PF07687 Peptidase dimerisation domain HCV84_014855 PF01546 Peptidase family M20/M25/M40 HCV84_014860 PF01546 Peptidase family M20/M25/M40 HCV84_014865 PF03806 AbgT putative transporter family HCV84_014875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV84_014875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCV84_014880 PF00027 Cyclic nucleotide-binding domain HCV84_014880 PF00325 Bacterial regulatory proteins, crp family HCV84_014885 PF00582 Universal stress protein family HCV84_014890 PF15930 Domain of unknown function HCV84_014895 PF02233 NAD(P) transhydrogenase beta subunit HCV84_014900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HCV84_014900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HCV84_014900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HCV84_014910 PF07338 Protein of unknown function (DUF1471) HCV84_014915 PF13520 Amino acid permease HCV84_014925 PF06942 GlpM protein HCV84_014930 PF00072 Response regulator receiver domain HCV84_014930 PF00486 Transcriptional regulatory protein, C terminal HCV84_014940 PF00672 HAMP domain HCV84_014940 PF00512 His Kinase A (phospho-acceptor) domain HCV84_014940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_014945 PF05472 DNA replication terminus site-binding protein (Ter protein) HCV84_014950 PF00206 Lyase HCV84_014950 PF10415 Fumarase C C-terminus HCV84_014955 PF05683 Fumarase C-terminus HCV84_014955 PF05681 Fumarate hydratase (Fumerase) HCV84_014960 PF01238 Phosphomannose isomerase type I HCV84_014965 PF06097 Bacterial protein of unknown function (DUF945) HCV84_014970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV84_014970 PF00356 Bacterial regulatory proteins, lacI family HCV84_014975 PF00367 phosphotransferase system, EIIB HCV84_014975 PF02378 Phosphotransferase system, EIIC HCV84_014980 PF00155 Aminotransferase class I and II HCV84_014990 PF14001 YdfZ protein HCV84_015005 PF04143 Sulphur transport HCV84_015010 PF01206 Sulfurtransferase TusA HCV84_015015 PF07166 Protein of unknown function (DUF1398) HCV84_015020 PF01679 Proteolipid membrane potential modulator HCV84_015025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCV84_015025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCV84_015030 PF00171 Aldehyde dehydrogenase family HCV84_015040 PF02698 DUF218 domain HCV84_015045 PF07690 Major Facilitator Superfamily HCV84_015045 PF00083 Sugar (and other) transporter HCV84_015050 PF00324 Amino acid permease HCV84_015055 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HCV84_015060 PF04996 Succinylarginine dihydrolase HCV84_015065 PF00171 Aldehyde dehydrogenase family HCV84_015070 PF04958 Arginine N-succinyltransferase beta subunit HCV84_015075 PF00202 Aminotransferase class-III HCV84_015085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCV84_015085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCV84_015090 PF00248 Aldo/keto reductase family HCV84_015095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_015095 PF03466 LysR substrate binding domain HCV84_015110 PF13533 Biotin-lipoyl like HCV84_015115 PF02321 Outer membrane efflux protein HCV84_015120 PF01596 O-methyltransferase HCV84_015125 PF04408 Helicase associated domain (HA2) HCV84_015125 PF11898 Domain of unknown function (DUF3418) HCV84_015125 PF00270 DEAD/DEAH box helicase HCV84_015125 PF00271 Helicase conserved C-terminal domain HCV84_015125 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HCV84_015130 PF02525 Flavodoxin-like fold HCV84_015140 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_015145 PF08223 PaaX-like protein C-terminal domain HCV84_015145 PF07848 PaaX-like protein HCV84_015150 PF00501 AMP-binding enzyme HCV84_015150 PF14535 AMP-binding enzyme C-terminal domain HCV84_015155 PF00108 Thiolase, N-terminal domain HCV84_015155 PF02803 Thiolase, C-terminal domain HCV84_015160 PF03061 Thioesterase superfamily HCV84_015165 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HCV84_015165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV84_015165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV84_015170 PF00378 Enoyl-CoA hydratase/isomerase HCV84_015175 PF00378 Enoyl-CoA hydratase/isomerase HCV84_015180 PF00175 Oxidoreductase NAD-binding domain HCV84_015180 PF00970 Oxidoreductase FAD-binding domain HCV84_015180 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_015185 PF01883 Iron-sulfur cluster assembly protein HCV84_015190 PF05138 Phenylacetic acid catabolic protein HCV84_015195 PF06243 Phenylacetic acid degradation B HCV84_015200 PF05138 Phenylacetic acid catabolic protein HCV84_015205 PF01575 MaoC like domain HCV84_015205 PF00171 Aldehyde dehydrogenase family HCV84_015210 PF02727 Copper amine oxidase, N2 domain HCV84_015210 PF07833 Copper amine oxidase N-terminal domain HCV84_015210 PF01179 Copper amine oxidase, enzyme domain HCV84_015210 PF02728 Copper amine oxidase, N3 domain HCV84_015220 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCV84_015220 PF02558 Ketopantoate reductase PanE/ApbA HCV84_015225 PF00171 Aldehyde dehydrogenase family HCV84_015230 PF12833 Helix-turn-helix domain HCV84_015230 PF14525 AraC-binding-like domain HCV84_015235 PF07027 Protein of unknown function (DUF1318) HCV84_015240 PF13617 YnbE-like lipoprotein HCV84_015245 PF11739 Dicarboxylate transport HCV84_015250 PF09335 SNARE associated Golgi protein HCV84_015255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_015255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_015260 PF03724 META domain HCV84_015265 PF03891 Domain of unknown function (DUF333) HCV84_015270 PF10371 Domain of unknown function HCV84_015270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_015270 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HCV84_015270 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HCV84_015270 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HCV84_015275 PF00267 Gram-negative porin HCV84_015285 PF00582 Universal stress protein family HCV84_015290 PF01171 PP-loop family HCV84_015295 PF00270 DEAD/DEAH box helicase HCV84_015295 PF03880 DbpA RNA binding domain HCV84_015295 PF00271 Helicase conserved C-terminal domain HCV84_015300 PF01544 CorA-like Mg2+ transporter protein HCV84_015305 PF08220 DeoR-like helix-turn-helix domain HCV84_015305 PF00455 DeoR C terminal sensor domain HCV84_015310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_015310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_015325 PF00324 Amino acid permease HCV84_015330 PF01037 Lrp/AsnC ligand binding domain HCV84_015340 PF00155 Aminotransferase class I and II HCV84_015345 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_015350 PF09383 NIL domain HCV84_015350 PF00005 ABC transporter HCV84_015355 PF03180 NLPA lipoprotein HCV84_015360 PF00155 Aminotransferase class I and II HCV84_015365 PF00107 Zinc-binding dehydrogenase HCV84_015365 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_015370 PF00440 Bacterial regulatory proteins, tetR family HCV84_015380 PF00753 Metallo-beta-lactamase superfamily HCV84_015395 PF03466 LysR substrate binding domain HCV84_015395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_015420 PF00440 Bacterial regulatory proteins, tetR family HCV84_015480 PF01527 Transposase HCV84_015515 PF13296 Putative type VI secretion system Rhs element Vgr HCV84_015515 PF04717 Type VI secretion system, phage-baseplate injector HCV84_015515 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HCV84_015520 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_015520 PF07724 AAA domain (Cdc48 subfamily) HCV84_015520 PF10431 C-terminal, D2-small domain, of ClpB protein HCV84_015520 PF17871 AAA lid domain HCV84_015530 PF00691 OmpA family HCV84_015530 PF13488 Glycine zipper HCV84_015545 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath HCV84_015555 PF01965 DJ-1/PfpI family HCV84_015560 PF01966 HD domain HCV84_015570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_015570 PF03466 LysR substrate binding domain HCV84_015590 PF00990 Diguanylate cyclase, GGDEF domain HCV84_015590 PF00072 Response regulator receiver domain HCV84_015605 PF00535 Glycosyl transferase family 2 HCV84_015605 PF03170 Bacterial cellulose synthase subunit HCV84_015605 PF07238 PilZ domain HCV84_015630 PF00072 Response regulator receiver domain HCV84_015630 PF00512 His Kinase A (phospho-acceptor) domain HCV84_015630 PF01627 Hpt domain HCV84_015630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HCV84_015630 PF00672 HAMP domain HCV84_015630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_015635 PF16355 Domain of unknown function (DUF4982) HCV84_015635 PF00703 Glycosyl hydrolases family 2 HCV84_015635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HCV84_015635 PF02837 Glycosyl hydrolases family 2, sugar binding domain HCV84_015640 PF00248 Aldo/keto reductase family HCV84_015645 PF07690 Major Facilitator Superfamily HCV84_015650 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HCV84_015655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_015655 PF03466 LysR substrate binding domain HCV84_015670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_015680 PF00246 Zinc carboxypeptidase HCV84_015685 PF13378 Enolase C-terminal domain-like HCV84_015685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV84_015690 PF08534 Redoxin HCV84_015695 PF05145 Transition state regulatory protein AbrB HCV84_015700 PF00158 Sigma-54 interaction domain HCV84_015700 PF18024 Helix-turn-helix domain HCV84_015710 PF03466 LysR substrate binding domain HCV84_015710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_015715 PF05128 Domain of unknown function (DUF697) HCV84_015720 PF04317 YcjX-like family, DUF463 HCV84_015725 PF09584 Phage shock protein PspD (Phageshock_PspD) HCV84_015730 PF04024 PspC domain HCV84_015735 PF06667 Phage shock protein B HCV84_015740 PF04012 PspA/IM30 family HCV84_015745 PF02954 Bacterial regulatory protein, Fis family HCV84_015745 PF00158 Sigma-54 interaction domain HCV84_015750 PF07690 Major Facilitator Superfamily HCV84_015755 PF07687 Peptidase dimerisation domain HCV84_015755 PF01546 Peptidase family M20/M25/M40 HCV84_015760 PF12833 Helix-turn-helix domain HCV84_015770 PF13460 NAD(P)H-binding HCV84_015775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_015780 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_015785 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_015785 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_015790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_015790 PF00005 ABC transporter HCV84_015795 PF00005 ABC transporter HCV84_015800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCV84_015805 PF05962 HutD HCV84_015820 PF00773 RNB domain HCV84_015820 PF08206 Ribonuclease B OB domain HCV84_015820 PF17876 Cold shock domain HCV84_015820 PF00575 S1 RNA binding domain HCV84_015830 PF08220 DeoR-like helix-turn-helix domain HCV84_015830 PF00455 DeoR C terminal sensor domain HCV84_015835 PF05433 Glycine zipper 2TM domain HCV84_015840 PF01253 Translation initiation factor SUI1 HCV84_015845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCV84_015850 PF18073 Rubredoxin metal binding domain HCV84_015855 PF06305 Lipopolysaccharide assembly protein A domain HCV84_015860 PF01569 PAP2 superfamily HCV84_015865 PF00925 GTP cyclohydrolase II HCV84_015870 PF00694 Aconitase C-terminal domain HCV84_015870 PF00330 Aconitase family (aconitate hydratase) HCV84_015880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_015880 PF03466 LysR substrate binding domain HCV84_015885 PF08272 Topoisomerase I zinc-ribbon-like HCV84_015885 PF01396 Topoisomerase DNA binding C4 zinc finger HCV84_015885 PF01751 Toprim domain HCV84_015885 PF01131 DNA topoisomerase HCV84_015890 PF10692 Protein of unknown function (DUF2498) HCV84_015895 PF08496 Peptidase family S49 N-terminal HCV84_015895 PF01343 Peptidase family S49 HCV84_015905 PF00106 short chain dehydrogenase HCV84_015910 PF12557 Cob(I)alamin adenosyltransferase N terminal HCV84_015910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HCV84_015915 PF00849 RNA pseudouridylate synthase HCV84_015915 PF01479 S4 domain HCV84_015940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_015940 PF03466 LysR substrate binding domain HCV84_015950 PF01300 Telomere recombination HCV84_015955 PF02811 PHP domain HCV84_015960 PF04715 Anthranilate synthase component I, N terminal region HCV84_015960 PF00425 chorismate binding enzyme HCV84_015965 PF00591 Glycosyl transferase family, a/b domain HCV84_015965 PF02885 Glycosyl transferase family, helical bundle domain HCV84_015965 PF00117 Glutamine amidotransferase class-I HCV84_015970 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HCV84_015970 PF00218 Indole-3-glycerol phosphate synthase HCV84_015975 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_015980 PF00290 Tryptophan synthase alpha chain HCV84_015985 PF05161 MOFRL family HCV84_015985 PF13660 Domain of unknown function (DUF4147) HCV84_015990 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV84_015995 PF07690 Major Facilitator Superfamily HCV84_016000 PF03466 LysR substrate binding domain HCV84_016000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_016020 PF00106 short chain dehydrogenase HCV84_016030 PF13640 2OG-Fe(II) oxygenase superfamily HCV84_016030 PF18331 PKHD-type hydroxylase C-terminal domain HCV84_016035 PF03922 OmpW family HCV84_016040 PF03692 Putative zinc- or iron-chelating domain HCV84_016050 PF04279 Intracellular septation protein A HCV84_016055 PF00593 TonB dependent receptor HCV84_016055 PF07715 TonB-dependent Receptor Plug Domain HCV84_016060 PF03061 Thioesterase superfamily HCV84_016065 PF14002 YniB-like protein HCV84_016070 PF13419 Haloacid dehalogenase-like hydrolase HCV84_016080 PF04307 LexA-binding, inner membrane-associated putative hydrolase HCV84_016085 PF00375 Sodium:dicarboxylate symporter family HCV84_016090 PF10729 Cell division activator CedA HCV84_016095 PF18011 C-terminal domain found in long catalases HCV84_016095 PF06628 Catalase-related immune-responsive HCV84_016095 PF00199 Catalase HCV84_016100 PF04794 YdjC-like protein HCV84_016105 PF02056 Family 4 glycosyl hydrolase HCV84_016105 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV84_016110 PF07883 Cupin domain HCV84_016110 PF12833 Helix-turn-helix domain HCV84_016115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV84_016120 PF02378 Phosphotransferase system, EIIC HCV84_016130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_016135 PF04355 SmpA / OmlA family HCV84_016140 PF02540 NAD synthase HCV84_016150 PF07813 LTXXQ motif family protein HCV84_016155 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HCV84_016160 PF04996 Succinylarginine dihydrolase HCV84_016165 PF00171 Aldehyde dehydrogenase family HCV84_016170 PF04958 Arginine N-succinyltransferase beta subunit HCV84_016175 PF00202 Aminotransferase class-III HCV84_016180 PF03372 Endonuclease/Exonuclease/phosphatase family HCV84_016185 PF09335 SNARE associated Golgi protein HCV84_016190 PF09335 SNARE associated Golgi protein HCV84_016195 PF02627 Carboxymuconolactone decarboxylase family HCV84_016200 PF13416 Bacterial extracellular solute-binding protein HCV84_016205 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_016210 PF00005 ABC transporter HCV84_016215 PF00581 Rhodanese-like domain HCV84_016220 PF01066 CDP-alcohol phosphatidyltransferase HCV84_016225 PF00293 NUDIX domain HCV84_016230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCV84_016230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCV84_016235 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV84_016235 PF00698 Acyl transferase domain HCV84_016235 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV84_016235 PF08659 KR domain HCV84_016235 PF00550 Phosphopantetheine attachment site HCV84_016235 PF14765 Polyketide synthase dehydratase HCV84_016235 PF16197 Ketoacyl-synthetase C-terminal extension HCV84_016235 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_016240 PF01131 DNA topoisomerase HCV84_016240 PF01751 Toprim domain HCV84_016245 PF00586 AIR synthase related protein, N-terminal domain HCV84_016245 PF02769 AIR synthase related protein, C-terminal domain HCV84_016250 PF01569 PAP2 superfamily HCV84_016255 PF00881 Nitroreductase family HCV84_016260 PF01343 Peptidase family S49 HCV84_016265 PF00710 Asparaginase, N-terminal HCV84_016265 PF17763 Glutaminase/Asparaginase C-terminal domain HCV84_016270 PF00857 Isochorismatase family HCV84_016275 PF00704 Glycosyl hydrolases family 18 HCV84_016275 PF00041 Fibronectin type III domain HCV84_016280 PF01844 HNH endonuclease HCV84_016285 PF07023 Protein of unknown function (DUF1315) HCV84_016290 PF01641 SelR domain HCV84_016295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCV84_016295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCV84_016300 PF01263 Aldose 1-epimerase HCV84_016305 PF00248 Aldo/keto reductase family HCV84_016310 PF06629 MltA-interacting protein MipA HCV84_016315 PF08298 PrkA AAA domain HCV84_016315 PF06798 PrkA serine protein kinase C-terminal domain HCV84_016320 PF04285 Protein of unknown function (DUF444) HCV84_016330 PF00255 Glutathione peroxidase HCV84_016345 PF03466 LysR substrate binding domain HCV84_016345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_016350 PF07690 Major Facilitator Superfamily HCV84_016360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_016360 PF03466 LysR substrate binding domain HCV84_016365 PF13438 Domain of unknown function (DUF4113) HCV84_016365 PF11798 IMS family HHH motif HCV84_016365 PF00817 impB/mucB/samB family HCV84_016365 PF11799 impB/mucB/samB family C-terminal domain HCV84_016370 PF00717 Peptidase S24-like HCV84_016375 PF06183 DinI-like family HCV84_016380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV84_016385 PF04073 Aminoacyl-tRNA editing domain HCV84_016390 PF04284 Protein of unknown function (DUF441) HCV84_016395 PF12833 Helix-turn-helix domain HCV84_016395 PF02311 AraC-like ligand binding domain HCV84_016400 PF07690 Major Facilitator Superfamily HCV84_016405 PF06418 CTP synthase N-terminus HCV84_016405 PF00117 Glutamine amidotransferase class-I HCV84_016410 PF04463 Protein of unknown function (DUF523) HCV84_016415 PF04343 Protein of unknown function, DUF488 HCV84_016420 PF03891 Domain of unknown function (DUF333) HCV84_016425 PF13185 GAF domain HCV84_016425 PF00990 Diguanylate cyclase, GGDEF domain HCV84_016445 PF10749 Protein of unknown function (DUF2534) HCV84_016450 PF01810 LysE type translocator HCV84_016455 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV84_016460 PF17763 Glutaminase/Asparaginase C-terminal domain HCV84_016460 PF00710 Asparaginase, N-terminal HCV84_016465 PF01966 HD domain HCV84_016470 PF00990 Diguanylate cyclase, GGDEF domain HCV84_016475 PF03466 LysR substrate binding domain HCV84_016475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_016480 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCV84_016510 PF02322 Cytochrome bd terminal oxidase subunit II HCV84_016515 PF01654 Cytochrome bd terminal oxidase subunit I HCV84_016520 PF05067 Manganese containing catalase HCV84_016525 PF05974 Domain of unknown function (DUF892) HCV84_016530 PF05974 Domain of unknown function (DUF892) HCV84_016535 PF10685 Stress-induced bacterial acidophilic repeat motif HCV84_016540 PF00107 Zinc-binding dehydrogenase HCV84_016540 PF13823 Alcohol dehydrogenase GroES-associated HCV84_016540 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_016545 PF06906 Protein of unknown function (DUF1272) HCV84_016570 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV84_016575 PF00849 RNA pseudouridylate synthase HCV84_016580 PF00293 NUDIX domain HCV84_016590 PF04356 Protein of unknown function (DUF489) HCV84_016595 PF08328 Adenylosuccinate lyase C-terminal HCV84_016595 PF00206 Lyase HCV84_016610 PF00486 Transcriptional regulatory protein, C terminal HCV84_016610 PF00072 Response regulator receiver domain HCV84_016615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_016615 PF08918 PhoQ Sensor HCV84_016620 PF08007 Cupin superfamily protein HCV84_016625 PF07687 Peptidase dimerisation domain HCV84_016625 PF01546 Peptidase family M20/M25/M40 HCV84_016630 PF08402 TOBE domain HCV84_016630 PF00005 ABC transporter HCV84_016635 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_016640 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_016645 PF13416 Bacterial extracellular solute-binding protein HCV84_016655 PF00501 AMP-binding enzyme HCV84_016655 PF13193 AMP-binding enzyme C-terminal domain HCV84_016660 PF02780 Transketolase, C-terminal domain HCV84_016660 PF02779 Transketolase, pyrimidine binding domain HCV84_016660 PF00456 Transketolase, thiamine diphosphate binding domain HCV84_016665 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCV84_016670 PF02502 Ribose/Galactose Isomerase HCV84_016675 PF03829 PTS system glucitol/sorbitol-specific IIA component HCV84_016680 PF03812 2-keto-3-deoxygluconate permease HCV84_016685 PF07005 Sugar-binding N-terminal domain HCV84_016685 PF17042 Nucleotide-binding C-terminal domain HCV84_016690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HCV84_016695 PF00121 Triosephosphate isomerase HCV84_016700 PF04198 Putative sugar-binding domain HCV84_016710 PF02146 Sir2 family HCV84_016715 PF00480 ROK family HCV84_016720 PF02687 FtsX-like permease family HCV84_016720 PF12704 MacB-like periplasmic core domain HCV84_016725 PF00005 ABC transporter HCV84_016730 PF02687 FtsX-like permease family HCV84_016730 PF12704 MacB-like periplasmic core domain HCV84_016740 PF17757 UvrB interaction domain HCV84_016740 PF03461 TRCF domain HCV84_016740 PF00271 Helicase conserved C-terminal domain HCV84_016740 PF00270 DEAD/DEAH box helicase HCV84_016740 PF02559 CarD-like/TRCF domain HCV84_016745 PF17969 L,D-transpeptidase C-terminal domain HCV84_016745 PF01476 LysM domain HCV84_016745 PF03734 L,D-transpeptidase catalytic domain HCV84_016750 PF07338 Protein of unknown function (DUF1471) HCV84_016760 PF00440 Bacterial regulatory proteins, tetR family HCV84_016770 PF00593 TonB dependent receptor HCV84_016770 PF07715 TonB-dependent Receptor Plug Domain HCV84_016775 PF05433 Glycine zipper 2TM domain HCV84_016780 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_016785 PF05728 Uncharacterised protein family (UPF0227) HCV84_016790 PF00933 Glycosyl hydrolase family 3 N terminal domain HCV84_016795 PF01636 Phosphotransferase enzyme family HCV84_016800 PF13036 Peptidoglycan-synthase activator LpoB HCV84_016805 PF07233 Protein of unknown function (DUF1425) HCV84_016810 PF01230 HIT domain HCV84_016815 PF00367 phosphotransferase system, EIIB HCV84_016815 PF02378 Phosphotransferase system, EIIC HCV84_016820 PF01026 TatD related DNase HCV84_016825 PF09115 DNA polymerase III, delta subunit, C terminal HCV84_016830 PF02223 Thymidylate kinase HCV84_016835 PF02618 YceG-like family HCV84_016840 PF01063 Amino-transferase class IV HCV84_016845 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV84_016845 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV84_016850 PF00550 Phosphopantetheine attachment site HCV84_016860 PF00698 Acyl transferase domain HCV84_016865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HCV84_016865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HCV84_016870 PF02504 Fatty acid synthesis protein HCV84_016875 PF01783 Ribosomal L32p protein family HCV84_016880 PF02620 Large ribosomal RNA subunit accumulation protein YceD HCV84_016885 PF02545 Maf-like protein HCV84_016890 PF01479 S4 domain HCV84_016890 PF00849 RNA pseudouridylate synthase HCV84_016900 PF10150 Ribonuclease E/G family HCV84_016900 PF12111 Polyribonucleotide phosphorylase C terminal HCV84_016900 PF00575 S1 RNA binding domain HCV84_016905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_016905 PF03466 LysR substrate binding domain HCV84_016910 PF07690 Major Facilitator Superfamily HCV84_016915 PF03023 Lipid II flippase MurJ HCV84_016920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_016925 PF04337 Protein of unknown function, DUF480 HCV84_016930 PF13302 Acetyltransferase (GNAT) domain HCV84_016935 PF07690 Major Facilitator Superfamily HCV84_016940 PF07273 Protein of unknown function (DUF1439) HCV84_016945 PF01979 Amidohydrolase family HCV84_016950 PF06183 DinI-like family HCV84_016955 PF13991 BssS protein family HCV84_016960 PF01266 FAD dependent oxidoreductase HCV84_016965 PF10968 Protein of unknown function (DUF2770) HCV84_016970 PF00581 Rhodanese-like domain HCV84_016970 PF12368 Rhodanase C-terminal HCV84_016970 PF17773 UPF0176 acylphosphatase like domain HCV84_016975 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV84_016980 PF07690 Major Facilitator Superfamily HCV84_016985 PF13984 MsyB protein HCV84_016990 PF07119 Protein of unknown function (DUF1375) HCV84_016995 PF00535 Glycosyl transferase family 2 HCV84_017000 PF04349 Periplasmic glucan biosynthesis protein, MdoG HCV84_017005 PF01757 Acyltransferase family HCV84_017010 PF00440 Bacterial regulatory proteins, tetR family HCV84_017010 PF13977 BetI-type transcriptional repressor, C-terminal HCV84_017015 PF01661 Macro domain HCV84_017020 PF06496 Protein of unknown function (DUF1097) HCV84_017025 PF02613 Nitrate reductase delta subunit HCV84_017030 PF02811 PHP domain HCV84_017035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_017050 PF03466 LysR substrate binding domain HCV84_017050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_017055 PF02678 Pirin HCV84_017055 PF05726 Pirin C-terminal cupin domain HCV84_017060 PF00857 Isochorismatase family HCV84_017070 PF01323 DSBA-like thioredoxin domain HCV84_017075 PF02562 PhoH-like protein HCV84_017080 PF04261 Dyp-type peroxidase family HCV84_017085 PF13473 Cupredoxin-like domain HCV84_017085 PF09375 Imelysin HCV84_017090 PF03239 Iron permease FTR1 family HCV84_017095 PF07670 Nucleoside recognition HCV84_017095 PF07662 Na+ dependent nucleoside transporter C-terminus HCV84_017095 PF01773 Na+ dependent nucleoside transporter N-terminus HCV84_017105 PF00474 Sodium:solute symporter family HCV84_017110 PF00171 Aldehyde dehydrogenase family HCV84_017110 PF14850 DNA-binding domain of Proline dehydrogenase HCV84_017110 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HCV84_017110 PF01619 Proline dehydrogenase HCV84_017120 PF08362 YcdC-like protein, C-terminal region HCV84_017120 PF00440 Bacterial regulatory proteins, tetR family HCV84_017125 PF00296 Luciferase-like monooxygenase HCV84_017130 PF00857 Isochorismatase family HCV84_017135 PF01042 Endoribonuclease L-PSP HCV84_017140 PF00561 alpha/beta hydrolase fold HCV84_017145 PF00881 Nitroreductase family HCV84_017150 PF01613 Flavin reductase like domain HCV84_017155 PF00860 Permease family HCV84_017165 PF10685 Stress-induced bacterial acidophilic repeat motif HCV84_017175 PF03358 NADPH-dependent FMN reductase HCV84_017180 PF13993 YccJ-like protein HCV84_017185 PF00328 Histidine phosphatase superfamily (branch 2) HCV84_017190 PF01638 HxlR-like helix-turn-helix HCV84_017210 PF00324 Amino acid permease HCV84_017215 PF00120 Glutamine synthetase, catalytic domain HCV84_017220 PF07722 Peptidase C26 HCV84_017225 PF07883 Cupin domain HCV84_017225 PF01381 Helix-turn-helix HCV84_017230 PF00171 Aldehyde dehydrogenase family HCV84_017235 PF01266 FAD dependent oxidoreductase HCV84_017240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_017240 PF03466 LysR substrate binding domain HCV84_017245 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV84_017250 PF02028 BCCT, betaine/carnitine/choline family transporter HCV84_017255 PF00355 Rieske [2Fe-2S] domain HCV84_017255 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HCV84_017260 PF00171 Aldehyde dehydrogenase family HCV84_017265 PF00970 Oxidoreductase FAD-binding domain HCV84_017265 PF00175 Oxidoreductase NAD-binding domain HCV84_017265 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_017270 PF00381 PTS HPr component phosphorylation site HCV84_017270 PF02896 PEP-utilising enzyme, TIM barrel domain HCV84_017270 PF00391 PEP-utilising enzyme, mobile domain HCV84_017270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_017270 PF05524 PEP-utilising enzyme, N-terminal HCV84_017280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_017285 PF02901 Pyruvate formate lyase-like HCV84_017285 PF01228 Glycine radical HCV84_017290 PF04055 Radical SAM superfamily HCV84_017295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_017305 PF12833 Helix-turn-helix domain HCV84_017310 PF00990 Diguanylate cyclase, GGDEF domain HCV84_017315 PF00005 ABC transporter HCV84_017320 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_017330 PF00563 EAL domain HCV84_017330 PF12792 CSS motif domain associated with EAL HCV84_017340 PF00343 Carbohydrate phosphorylase HCV84_017350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_017355 PF01027 Inhibitor of apoptosis-promoting Bax1 HCV84_017360 PF04358 DsrC like protein HCV84_017365 PF00708 Acylphosphatase HCV84_017370 PF12833 Helix-turn-helix domain HCV84_017375 PF01161 Phosphatidylethanolamine-binding protein HCV84_017380 PF17785 PUA-like domain HCV84_017380 PF10672 S-adenosylmethionine-dependent methyltransferase HCV84_017385 PF08755 Hemimethylated DNA-binding protein YccV like HCV84_017400 PF13533 Biotin-lipoyl like HCV84_017405 PF00664 ABC transporter transmembrane region HCV84_017405 PF00005 ABC transporter HCV84_017405 PF03412 Peptidase C39 family HCV84_017420 PF13380 CoA binding domain HCV84_017425 PF02142 MGS-like domain HCV84_017430 PF00580 UvrD/REP helicase N-terminal domain HCV84_017430 PF12462 DNA helicase IV / RNA helicase N terminal HCV84_017430 PF13361 UvrD-like helicase C-terminal domain HCV84_017435 PF03733 Inner membrane component domain HCV84_017440 PF12805 FUSC-like inner membrane protein yccS HCV84_017445 PF04994 TfoX C-terminal domain HCV84_017445 PF04993 TfoX N-terminal domain HCV84_017450 PF03846 Cell division inhibitor SulA HCV84_017455 PF01389 OmpA-like transmembrane domain HCV84_017455 PF00691 OmpA family HCV84_017460 PF06303 MatP N-terminal domain HCV84_017460 PF17414 MatP C-terminal ribbon-helix-helix domain HCV84_017465 PF05362 Lon protease (S16) C-terminal proteolytic domain HCV84_017465 PF13654 AAA domain HCV84_017470 PF07977 FabA-like domain HCV84_017475 PF04957 Ribosome modulation factor HCV84_017480 PF03886 ABC-type transport auxiliary lipoprotein component HCV84_017485 PF02470 MlaD protein HCV84_017490 PF04403 Paraquat-inducible protein A HCV84_017495 PF12848 ABC transporter HCV84_017495 PF00005 ABC transporter HCV84_017495 PF16326 ABC transporter C-terminal domain HCV84_017500 PF10672 S-adenosylmethionine-dependent methyltransferase HCV84_017500 PF01170 Putative RNA methylase family UPF0020 HCV84_017500 PF02926 THUMP domain HCV84_017505 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_017505 PF03476 MOSC N-terminal beta barrel domain HCV84_017505 PF03473 MOSC domain HCV84_017510 PF07126 Cell-division protein ZapC HCV84_017515 PF01180 Dihydroorotate dehydrogenase HCV84_017520 PF03358 NADPH-dependent FMN reductase HCV84_017525 PF09084 NMT1/THI5 like HCV84_017530 PF00296 Luciferase-like monooxygenase HCV84_017535 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_017540 PF00005 ABC transporter HCV84_017545 PF01433 Peptidase family M1 domain HCV84_017545 PF11940 Domain of unknown function (DUF3458) Ig-like fold HCV84_017545 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HCV84_017550 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HCV84_017550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HCV84_017555 PF01546 Peptidase family M20/M25/M40 HCV84_017555 PF07687 Peptidase dimerisation domain HCV84_017560 PF01546 Peptidase family M20/M25/M40 HCV84_017560 PF07687 Peptidase dimerisation domain HCV84_017570 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_017580 PF00152 tRNA synthetases class II (D, K and N) HCV84_017580 PF01336 OB-fold nucleic acid binding domain HCV84_017585 PF00267 Gram-negative porin HCV84_017590 PF00155 Aminotransferase class I and II HCV84_017595 PF00753 Metallo-beta-lactamase superfamily HCV84_017600 PF05951 Bacterial protein of unknown function (DUF882) HCV84_017605 PF01471 Putative peptidoglycan binding domain HCV84_017605 PF03734 L,D-transpeptidase catalytic domain HCV84_017610 PF16330 MukB hinge domain HCV84_017610 PF04310 MukB N-terminal HCV84_017615 PF04288 MukE-like family HCV84_017620 PF17192 MukF middle domain HCV84_017620 PF03882 MukF winged-helix domain HCV84_017620 PF17193 MukF C-terminal domain HCV84_017625 PF13847 Methyltransferase domain HCV84_017630 PF02698 DUF218 domain HCV84_017635 PF01636 Phosphotransferase enzyme family HCV84_017640 PF02348 Cytidylyltransferase HCV84_017645 PF03966 Trm112p-like protein HCV84_017650 PF06224 Winged helix DNA-binding domain HCV84_017655 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HCV84_017660 PF00005 ABC transporter HCV84_017660 PF00664 ABC transporter transmembrane region HCV84_017665 PF00753 Metallo-beta-lactamase superfamily HCV84_017665 PF03772 Competence protein HCV84_017670 PF00216 Bacterial DNA-binding protein HCV84_017675 PF00575 S1 RNA binding domain HCV84_017680 PF02224 Cytidylate kinase HCV84_017685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCV84_017690 PF00266 Aminotransferase class-V HCV84_017695 PF04239 Protein of unknown function (DUF421) HCV84_017700 PF18381 YcaO cyclodehydratase C-terminal domain HCV84_017700 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HCV84_017705 PF01226 Formate/nitrite transporter HCV84_017710 PF01228 Glycine radical HCV84_017710 PF02901 Pyruvate formate lyase-like HCV84_017715 PF04055 Radical SAM superfamily HCV84_017720 PF07690 Major Facilitator Superfamily HCV84_017725 PF04976 DMSO reductase anchor subunit (DmsC) HCV84_017730 PF12800 4Fe-4S binding domain HCV84_017730 PF13247 4Fe-4S dicluster domain HCV84_017735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV84_017735 PF00384 Molybdopterin oxidoreductase HCV84_017735 PF01568 Molydopterin dinucleotide binding domain HCV84_017740 PF02403 Seryl-tRNA synthetase N-terminal domain HCV84_017740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCV84_017745 PF16193 AAA C-terminal domain HCV84_017745 PF12002 MgsA AAA+ ATPase C terminal HCV84_017745 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_017750 PF03548 Outer membrane lipoprotein carrier protein LolA HCV84_017755 PF09397 Ftsk gamma domain HCV84_017755 PF17854 FtsK alpha domain HCV84_017755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HCV84_017755 PF01580 FtsK/SpoIIIE family HCV84_017760 PF01037 Lrp/AsnC ligand binding domain HCV84_017765 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_017770 PF00005 ABC transporter HCV84_017770 PF00664 ABC transporter transmembrane region HCV84_017775 PF00005 ABC transporter HCV84_017775 PF00664 ABC transporter transmembrane region HCV84_017780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HCV84_017785 PF01176 Translation initiation factor 1A / IF-1 HCV84_017790 PF02861 Clp amino terminal domain, pathogenicity island component HCV84_017790 PF07724 AAA domain (Cdc48 subfamily) HCV84_017790 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_017790 PF17871 AAA lid domain HCV84_017790 PF10431 C-terminal, D2-small domain, of ClpB protein HCV84_017795 PF02617 ATP-dependent Clp protease adaptor protein ClpS HCV84_017800 PF00313 'Cold-shock' DNA-binding domain HCV84_017805 PF00005 ABC transporter HCV84_017805 PF12704 MacB-like periplasmic core domain HCV84_017805 PF02687 FtsX-like permease family HCV84_017810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_017815 PF11398 Protein of unknown function (DUF2813) HCV84_017820 PF00230 Major intrinsic protein HCV84_017825 PF03956 Lysine exporter LysO HCV84_017830 PF03063 Prismane/CO dehydrogenase family HCV84_017835 PF00175 Oxidoreductase NAD-binding domain HCV84_017835 PF00970 Oxidoreductase FAD-binding domain HCV84_017835 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_017845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_017845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_017845 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_017850 PF01212 Beta-eliminating lyase HCV84_017855 PF13460 NAD(P)H-binding HCV84_017855 PF11066 Protein of unknown function (DUF2867) HCV84_017860 PF01370 NAD dependent epimerase/dehydratase family HCV84_017865 PF01510 N-acetylmuramoyl-L-alanine amidase HCV84_017870 PF00360 Phytochrome region HCV84_017870 PF00990 Diguanylate cyclase, GGDEF domain HCV84_017870 PF01590 GAF domain HCV84_017870 PF00563 EAL domain HCV84_017875 PF12883 Protein of unknown function (DUF3828) HCV84_017880 PF00005 ABC transporter HCV84_017885 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_017890 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_017895 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_017900 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_017905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_017905 PF16736 Single Cache-like HCV84_017905 PF00512 His Kinase A (phospho-acceptor) domain HCV84_017905 PF00989 PAS fold HCV84_017910 PF00072 Response regulator receiver domain HCV84_017910 PF00486 Transcriptional regulatory protein, C terminal HCV84_017915 PF05958 tRNA (Uracil-5-)-methyltransferase HCV84_017920 PF10767 Protein of unknown function (DUF2593) HCV84_017925 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_017930 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_017935 PF00005 ABC transporter HCV84_017935 PF08402 TOBE domain HCV84_017940 PF13416 Bacterial extracellular solute-binding protein HCV84_017945 PF10722 Putative bacterial sensory transduction regulator HCV84_017950 PF08443 RimK-like ATP-grasp domain HCV84_017950 PF18030 RimK PreATP-grasp domain HCV84_017955 PF00881 Nitroreductase family HCV84_017960 PF07214 Protein of unknown function (DUF1418) HCV84_017965 PF00462 Glutaredoxin HCV84_017970 PF11045 Putative inner membrane protein of Enterobacteriaceae HCV84_017975 PF06826 Predicted Permease Membrane Region HCV84_017975 PF02080 TrkA-C domain HCV84_017980 PF00440 Bacterial regulatory proteins, tetR family HCV84_017985 PF07690 Major Facilitator Superfamily HCV84_017995 PF07690 Major Facilitator Superfamily HCV84_018000 PF01569 PAP2 superfamily HCV84_018005 PF08220 DeoR-like helix-turn-helix domain HCV84_018005 PF00455 DeoR C terminal sensor domain HCV84_018010 PF00768 D-alanyl-D-alanine carboxypeptidase HCV84_018010 PF07943 Penicillin-binding protein 5, C-terminal domain HCV84_018020 PF00043 Glutathione S-transferase, C-terminal domain HCV84_018020 PF13417 Glutathione S-transferase, N-terminal domain HCV84_018025 PF07995 Glucose / Sorbosone dehydrogenase HCV84_018030 PF10799 Biofilm formation protein (YliH/bssR) HCV84_018035 PF01306 LacY proton/sugar symporter HCV84_018040 PF00919 Uncharacterized protein family UPF0004 HCV84_018040 PF04055 Radical SAM superfamily HCV84_018040 PF18693 TRAM domain HCV84_018045 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_018045 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_018050 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_018055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_018060 PF00005 ABC transporter HCV84_018060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_018065 PF01112 Asparaginase HCV84_018070 PF00994 Probable molybdopterin binding domain HCV84_018070 PF03454 MoeA C-terminal region (domain IV) HCV84_018070 PF03453 MoeA N-terminal region (domain I and II) HCV84_018075 PF00899 ThiF family HCV84_018080 PF04055 Radical SAM superfamily HCV84_018085 PF01228 Glycine radical HCV84_018085 PF02901 Pyruvate formate lyase-like HCV84_018095 PF07350 Protein of unknown function (DUF1479) HCV84_018100 PF00356 Bacterial regulatory proteins, lacI family HCV84_018105 PF07690 Major Facilitator Superfamily HCV84_018110 PF01055 Glycosyl hydrolases family 31 HCV84_018110 PF17137 Domain of unknown function (DUF5110) HCV84_018110 PF16338 Domain of unknown function (DUF4968) HCV84_018110 PF13802 Galactose mutarotase-like HCV84_018115 PF12848 ABC transporter HCV84_018115 PF00005 ABC transporter HCV84_018120 PF13350 Tyrosine phosphatase family HCV84_018125 PF03734 L,D-transpeptidase catalytic domain HCV84_018125 PF17969 L,D-transpeptidase C-terminal domain HCV84_018130 PF07702 UTRA domain HCV84_018130 PF00392 Bacterial regulatory proteins, gntR family HCV84_018135 PF00232 Glycosyl hydrolase family 1 HCV84_018140 PF03600 Citrate transporter HCV84_018145 PF01325 Iron dependent repressor, N-terminal DNA binding domain HCV84_018145 PF02742 Iron dependent repressor, metal binding and dimerisation domain HCV84_018155 PF00884 Sulfatase HCV84_018160 PF13505 Outer membrane protein beta-barrel domain HCV84_018165 PF00892 EamA-like transporter family HCV84_018170 PF00210 Ferritin-like domain HCV84_018175 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_018180 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_018185 PF00005 ABC transporter HCV84_018190 PF00924 Mechanosensitive ion channel HCV84_018195 PF05971 RNA methyltransferase HCV84_018200 PF01613 Flavin reductase like domain HCV84_018210 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCV84_018215 PF07338 Protein of unknown function (DUF1471) HCV84_018220 PF02885 Glycosyl transferase family, helical bundle domain HCV84_018225 PF13307 Helicase C-terminal domain HCV84_018225 PF06733 DEAD_2 HCV84_018225 PF00270 DEAD/DEAH box helicase HCV84_018230 PF00271 Helicase conserved C-terminal domain HCV84_018230 PF00270 DEAD/DEAH box helicase HCV84_018235 PF02780 Transketolase, C-terminal domain HCV84_018235 PF02779 Transketolase, pyrimidine binding domain HCV84_018240 PF00456 Transketolase, thiamine diphosphate binding domain HCV84_018250 PF07690 Major Facilitator Superfamily HCV84_018260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_018260 PF03466 LysR substrate binding domain HCV84_018265 PF09209 Tetracyclin repressor-like, C-terminal domain HCV84_018265 PF00440 Bacterial regulatory proteins, tetR family HCV84_018270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_018275 PF00005 ABC transporter HCV84_018290 PF11076 Putative inner membrane protein YbhQ HCV84_018295 PF03372 Endonuclease/Exonuclease/phosphatase family HCV84_018300 PF13091 PLD-like domain HCV84_018305 PF03706 Lysylphosphatidylglycerol synthase TM region HCV84_018310 PF01027 Inhibitor of apoptosis-promoting Bax1 HCV84_018315 PF02391 MoaE protein HCV84_018320 PF02597 ThiS family HCV84_018325 PF01967 MoaC family HCV84_018330 PF00994 Probable molybdopterin binding domain HCV84_018335 PF06463 Molybdenum Cofactor Synthesis C HCV84_018335 PF04055 Radical SAM superfamily HCV84_018340 PF01933 Uncharacterised protein family UPF0052 HCV84_018345 PF00884 Sulfatase HCV84_018345 PF08019 Phosphoethanolamine transferase EptA/EptB HCV84_018350 PF00072 Response regulator receiver domain HCV84_018350 PF00486 Transcriptional regulatory protein, C terminal HCV84_018355 PF00512 His Kinase A (phospho-acceptor) domain HCV84_018355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_018360 PF02151 UvrB/uvrC motif HCV84_018360 PF17757 UvrB interaction domain HCV84_018360 PF00271 Helicase conserved C-terminal domain HCV84_018360 PF12344 Ultra-violet resistance protein B HCV84_018360 PF04851 Type III restriction enzyme, res subunit HCV84_018370 PF00005 ABC transporter HCV84_018380 PF08241 Methyltransferase domain HCV84_018385 PF00155 Aminotransferase class I and II HCV84_018390 PF06968 Biotin and Thiamin Synthesis associated domain HCV84_018390 PF04055 Radical SAM superfamily HCV84_018395 PF00202 Aminotransferase class-III HCV84_018400 PF01161 Phosphatidylethanolamine-binding protein HCV84_018405 PF00324 Amino acid permease HCV84_018410 PF00221 Aromatic amino acid lyase HCV84_018415 PF01175 Urocanase Rossmann-like domain HCV84_018415 PF17392 Urocanase C-terminal domain HCV84_018415 PF17391 Urocanase N-terminal domain HCV84_018425 PF00392 Bacterial regulatory proteins, gntR family HCV84_018425 PF07702 UTRA domain HCV84_018430 PF00491 Arginase family HCV84_018435 PF01979 Amidohydrolase family HCV84_018440 PF01095 Pectinesterase HCV84_018445 PF00690 Cation transporter/ATPase, N-terminus HCV84_018445 PF00689 Cation transporting ATPase, C-terminus HCV84_018450 PF00582 Universal stress protein family HCV84_018455 PF13533 Biotin-lipoyl like HCV84_018460 PF00873 AcrB/AcrD/AcrF family HCV84_018490 PF13411 MerR HTH family regulatory protein HCV84_018495 PF04940 Sensors of blue-light using FAD HCV84_018495 PF00563 EAL domain HCV84_018500 PF10798 Biofilm development protein YmgB/AriR HCV84_018510 PF10798 Biofilm development protein YmgB/AriR HCV84_018515 PF10282 Lactonase, 7-bladed beta-propeller HCV84_018525 PF00005 ABC transporter HCV84_018525 PF03459 TOBE domain HCV84_018530 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_018540 PF10766 Multidrug efflux pump-associated protein AcrZ HCV84_018545 PF03459 TOBE domain HCV84_018545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_018550 PF00005 ABC transporter HCV84_018555 PF16363 GDP-mannose 4,6 dehydratase HCV84_018560 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HCV84_018560 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HCV84_018565 PF08544 GHMP kinases C terminal HCV84_018565 PF00288 GHMP kinases N terminal domain HCV84_018565 PF10509 Galactokinase galactose-binding signature HCV84_018570 PF01263 Aldose 1-epimerase HCV84_018575 PF00300 Histidine phosphatase superfamily (branch 1) HCV84_018580 PF00793 DAHP synthetase I family HCV84_018585 PF13985 YbgS-like protein HCV84_018590 PF01545 Cation efflux family HCV84_018595 PF04973 Nicotinamide mononucleotide transporter HCV84_018600 PF02445 Quinolinate synthetase A protein HCV84_018645 PF16331 TolA binding protein trimerisation HCV84_018645 PF13174 Tetratricopeptide repeat HCV84_018650 PF00691 OmpA family HCV84_018655 PF07676 WD40-like Beta Propeller Repeat HCV84_018655 PF04052 TolB amino-terminal domain HCV84_018660 PF06519 TolA C-terminal HCV84_018665 PF02472 Biopolymer transport protein ExbD/TolR HCV84_018670 PF01618 MotA/TolQ/ExbB proton channel family HCV84_018675 PF03061 Thioesterase superfamily HCV84_018680 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HCV84_018685 PF08173 Membrane bound YbgT-like protein HCV84_018690 PF02322 Cytochrome bd terminal oxidase subunit II HCV84_018695 PF01654 Cytochrome bd terminal oxidase subunit I HCV84_018700 PF02629 CoA binding domain HCV84_018700 PF00549 CoA-ligase HCV84_018705 PF08442 ATP-grasp domain HCV84_018705 PF00549 CoA-ligase HCV84_018710 PF02817 e3 binding domain HCV84_018710 PF00364 Biotin-requiring enzyme HCV84_018710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCV84_018715 PF16078 2-oxoglutarate dehydrogenase N-terminus HCV84_018715 PF16870 2-oxoglutarate dehydrogenase C-terminal HCV84_018715 PF02779 Transketolase, pyrimidine binding domain HCV84_018715 PF00676 Dehydrogenase E1 component HCV84_018720 PF13085 2Fe-2S iron-sulfur cluster binding domain HCV84_018725 PF02910 Fumarate reductase flavoprotein C-term HCV84_018725 PF00890 FAD binding domain HCV84_018730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HCV84_018735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HCV84_018740 PF00285 Citrate synthase, C-terminal domain HCV84_018745 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HCV84_018745 PF06827 Zinc finger found in FPG and IleRS HCV84_018745 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HCV84_018750 PF01470 Pyroglutamyl peptidase HCV84_018765 PF03746 LamB/YcsF family HCV84_018770 PF02626 Carboxyltransferase domain, subdomain A and B HCV84_018775 PF02682 Carboxyltransferase domain, subdomain C and D HCV84_018780 PF01784 NIF3 (NGG1p interacting factor 3) HCV84_018785 PF00854 POT family HCV84_018790 PF03441 FAD binding domain of DNA photolyase HCV84_018790 PF00875 DNA photolyase HCV84_018795 PF10725 Protein of unknown function (DUF2517) HCV84_018800 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) HCV84_018805 PF03814 Potassium-transporting ATPase A subunit HCV84_018815 PF02669 K+-transporting ATPase, c chain HCV84_018820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_018820 PF13493 Domain of unknown function (DUF4118) HCV84_018820 PF02702 Osmosensitive K+ channel His kinase sensor domain HCV84_018820 PF13492 GAF domain HCV84_018820 PF00512 His Kinase A (phospho-acceptor) domain HCV84_018825 PF00486 Transcriptional regulatory protein, C terminal HCV84_018825 PF00072 Response regulator receiver domain HCV84_018835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCV84_018835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCV84_018835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCV84_018835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCV84_018840 PF03925 SeqA protein C-terminal domain HCV84_018840 PF17206 SeqA protein N-terminal domain HCV84_018845 PF12697 Alpha/beta hydrolase family HCV84_018850 PF01402 Ribbon-helix-helix protein, copG family HCV84_018855 PF00258 Flavodoxin HCV84_018860 PF01475 Ferric uptake regulator family HCV84_018865 PF07690 Major Facilitator Superfamily HCV84_018870 PF13982 YbfN-like lipoprotein HCV84_018875 PF03573 outer membrane porin, OprD family HCV84_018885 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HCV84_018885 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCV84_018890 PF02378 Phosphotransferase system, EIIC HCV84_018890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCV84_018890 PF00367 phosphotransferase system, EIIB HCV84_018895 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCV84_018900 PF01979 Amidohydrolase family HCV84_018905 PF00480 ROK family HCV84_018905 PF01047 MarR family HCV84_018910 PF13344 Haloacid dehalogenase-like hydrolase HCV84_018915 PF13537 Glutamine amidotransferase domain HCV84_018915 PF00733 Asparagine synthase HCV84_018955 PF01494 FAD binding domain HCV84_018960 PF01938 TRAM domain HCV84_018960 PF04055 Radical SAM superfamily HCV84_018960 PF00919 Uncharacterized protein family UPF0004 HCV84_018965 PF02562 PhoH-like protein HCV84_018970 PF02130 Uncharacterized protein family UPF0054 HCV84_018975 PF03471 Transporter associated domain HCV84_018975 PF00571 CBS domain HCV84_018980 PF00795 Carbon-nitrogen hydrolase HCV84_018985 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_018990 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_018995 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_019000 PF00005 ABC transporter HCV84_019005 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HCV84_019005 PF08479 POTRA domain, ShlB-type HCV84_019005 PF17287 POTRA domain HCV84_019010 PF04829 Pre-toxin domain with VENN motif HCV84_019010 PF05860 haemagglutination activity domain HCV84_019010 PF13332 Hemagglutinin repeat HCV84_019010 PF14436 Bacterial EndoU nuclease HCV84_019010 PF05594 Haemagluttinin repeat HCV84_019015 PF07295 Zinc-ribbon containing domain HCV84_019020 PF00133 tRNA synthetases class I (I, L, M and V) HCV84_019020 PF13603 Leucyl-tRNA synthetase, Domain 2 HCV84_019020 PF08264 Anticodon-binding domain of tRNA HCV84_019025 PF04390 Lipopolysaccharide-assembly HCV84_019030 PF06144 DNA polymerase III, delta subunit HCV84_019030 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HCV84_019035 PF01467 Cytidylyltransferase-like HCV84_019040 PF00300 Histidine phosphatase superfamily (branch 1) HCV84_019050 PF02590 Predicted SPOUT methyltransferase HCV84_019055 PF03717 Penicillin-binding Protein dimerisation domain HCV84_019055 PF00905 Penicillin binding protein transpeptidase domain HCV84_019060 PF01098 Cell cycle protein HCV84_019065 PF03330 Lytic transglycolase HCV84_019065 PF05036 Sporulation related domain HCV84_019070 PF07943 Penicillin-binding protein 5, C-terminal domain HCV84_019070 PF00768 D-alanyl-D-alanine carboxypeptidase HCV84_019075 PF04359 Protein of unknown function (DUF493) HCV84_019080 PF03099 Biotin/lipoate A/B protein ligase family HCV84_019085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_019085 PF03466 LysR substrate binding domain HCV84_019090 PF04055 Radical SAM superfamily HCV84_019090 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HCV84_019095 PF02416 mttA/Hcf106 family HCV84_019100 PF00795 Carbon-nitrogen hydrolase HCV84_019105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HCV84_019110 PF00313 'Cold-shock' DNA-binding domain HCV84_019115 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP HCV84_019120 PF03606 C4-dicarboxylate anaerobic carrier HCV84_019125 PF00445 Ribonuclease T2 family HCV84_019130 PF01272 Transcription elongation factor, GreA/GreB, C-term HCV84_019130 PF14760 Rnk N-terminus HCV84_019135 PF00582 Universal stress protein family HCV84_019140 PF13192 Thioredoxin domain HCV84_019140 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_019145 PF10417 C-terminal domain of 1-Cys peroxiredoxin HCV84_019145 PF00578 AhpC/TSA family HCV84_019150 PF13098 Thioredoxin-like domain HCV84_019155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_019155 PF03466 LysR substrate binding domain HCV84_019160 PF11922 Domain of unknown function (DUF3440) HCV84_019160 PF01507 Phosphoadenosine phosphosulfate reductase family HCV84_019165 PF02195 ParB-like nuclease domain HCV84_019170 PF00155 Aminotransferase class I and II HCV84_019180 PF03079 ARD/ARD' family HCV84_019185 PF00384 Molybdopterin oxidoreductase HCV84_019185 PF01568 Molydopterin dinucleotide binding domain HCV84_019195 PF00005 ABC transporter HCV84_019200 PF02653 Branched-chain amino acid transport system / permease component HCV84_019205 PF02653 Branched-chain amino acid transport system / permease component HCV84_019215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_019215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_019220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_019220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_019225 PF00596 Class II Aldolase and Adducin N-terminal domain HCV84_019230 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCV84_019240 PF07969 Amidohydrolase family HCV84_019245 PF00356 Bacterial regulatory proteins, lacI family HCV84_019250 PF00459 Inositol monophosphatase family HCV84_019255 PF07690 Major Facilitator Superfamily HCV84_019260 PF00328 Histidine phosphatase superfamily (branch 2) HCV84_019265 PF01008 Initiation factor 2 subunit family HCV84_019270 PF01636 Phosphotransferase enzyme family HCV84_019285 PF02653 Branched-chain amino acid transport system / permease component HCV84_019290 PF00005 ABC transporter HCV84_019295 PF00465 Iron-containing alcohol dehydrogenase HCV84_019315 PF04328 Selenoprotein, putative HCV84_019320 PF13722 5TM C-terminal transporter carbon starvation CstA HCV84_019320 PF02554 Carbon starvation protein CstA HCV84_019325 PF03061 Thioesterase superfamily HCV84_019335 PF00857 Isochorismatase family HCV84_019335 PF00550 Phosphopantetheine attachment site HCV84_019340 PF00501 AMP-binding enzyme HCV84_019340 PF13193 AMP-binding enzyme C-terminal domain HCV84_019345 PF00425 chorismate binding enzyme HCV84_019350 PF01497 Periplasmic binding protein HCV84_019355 PF05977 Transmembrane secretion effector HCV84_019360 PF01032 FecCD transport family HCV84_019365 PF01032 FecCD transport family HCV84_019370 PF00005 ABC transporter HCV84_019375 PF00975 Thioesterase domain HCV84_019375 PF00550 Phosphopantetheine attachment site HCV84_019375 PF00668 Condensation domain HCV84_019375 PF00501 AMP-binding enzyme HCV84_019375 PF13193 AMP-binding enzyme C-terminal domain HCV84_019380 PF03621 MbtH-like protein HCV84_019385 PF11806 Domain of unknown function (DUF3327) HCV84_019385 PF00756 Putative esterase HCV84_019390 PF07715 TonB-dependent Receptor Plug Domain HCV84_019390 PF00593 TonB dependent receptor HCV84_019395 PF01648 4'-phosphopantetheinyl transferase superfamily HCV84_019395 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HCV84_019400 PF13407 Periplasmic binding protein domain HCV84_019410 PF00005 ABC transporter HCV84_019415 PF02653 Branched-chain amino acid transport system / permease component HCV84_019420 PF04754 Putative transposase, YhgA-like HCV84_019425 PF00325 Bacterial regulatory proteins, crp family HCV84_019425 PF04198 Putative sugar-binding domain HCV84_019430 PF00456 Transketolase, thiamine diphosphate binding domain HCV84_019435 PF02779 Transketolase, pyrimidine binding domain HCV84_019435 PF02780 Transketolase, C-terminal domain HCV84_019445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_019445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_019455 PF03466 LysR substrate binding domain HCV84_019455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_019460 PF00924 Mechanosensitive ion channel HCV84_019470 PF02028 BCCT, betaine/carnitine/choline family transporter HCV84_019475 PF13977 BetI-type transcriptional repressor, C-terminal HCV84_019475 PF00440 Bacterial regulatory proteins, tetR family HCV84_019480 PF00171 Aldehyde dehydrogenase family HCV84_019485 PF05199 GMC oxidoreductase HCV84_019485 PF00732 GMC oxidoreductase HCV84_019495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_019500 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_019505 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_019505 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_019510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_019510 PF00005 ABC transporter HCV84_019515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_019515 PF00005 ABC transporter HCV84_019520 PF00202 Aminotransferase class-III HCV84_019525 PF00106 short chain dehydrogenase HCV84_019530 PF00005 ABC transporter HCV84_019535 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_019540 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_019545 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_019545 PF01464 Transglycosylase SLT domain HCV84_019550 PF00392 Bacterial regulatory proteins, gntR family HCV84_019550 PF00155 Aminotransferase class I and II HCV84_019555 PF00155 Aminotransferase class I and II HCV84_019560 PF00892 EamA-like transporter family HCV84_019565 PF01546 Peptidase family M20/M25/M40 HCV84_019565 PF07687 Peptidase dimerisation domain HCV84_019570 PF00005 ABC transporter HCV84_019570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_019575 PF00005 ABC transporter HCV84_019575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_019580 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_019580 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_019585 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_019590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_019595 PF04107 Glutamate-cysteine ligase family 2(GCS2) HCV84_019600 PF09992 Phosphodiester glycosidase HCV84_019605 PF00873 AcrB/AcrD/AcrF family HCV84_019610 PF13533 Biotin-lipoyl like HCV84_019615 PF00689 Cation transporting ATPase, C-terminus HCV84_019615 PF00690 Cation transporter/ATPase, N-terminus HCV84_019620 PF06643 Protein of unknown function (DUF1158) HCV84_019625 PF12833 Helix-turn-helix domain HCV84_019630 PF12706 Beta-lactamase superfamily domain HCV84_019655 PF07690 Major Facilitator Superfamily HCV84_019660 PF00924 Mechanosensitive ion channel HCV84_019665 PF00356 Bacterial regulatory proteins, lacI family HCV84_019675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_019675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_019685 PF03825 Nucleoside H+ symporter HCV84_019690 PF00324 Amino acid permease HCV84_019695 PF00593 TonB dependent receptor HCV84_019695 PF07715 TonB-dependent Receptor Plug Domain HCV84_019705 PF00171 Aldehyde dehydrogenase family HCV84_019710 PF01266 FAD dependent oxidoreductase HCV84_019720 PF13520 Amino acid permease HCV84_019735 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HCV84_019740 PF00850 Histone deacetylase domain HCV84_019750 PF00196 Bacterial regulatory proteins, luxR family HCV84_019755 PF04055 Radical SAM superfamily HCV84_019760 PF00884 Sulfatase HCV84_019770 PF17409 MoaF C-terminal domain HCV84_019770 PF10703 MoaF N-terminal domain HCV84_019775 PF00248 Aldo/keto reductase family HCV84_019780 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_019785 PF07687 Peptidase dimerisation domain HCV84_019785 PF01546 Peptidase family M20/M25/M40 HCV84_019815 PF01032 FecCD transport family HCV84_019820 PF00005 ABC transporter HCV84_019825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_019825 PF00529 HlyD membrane-fusion protein of T1SS HCV84_019830 PF11742 Protein of unknown function (DUF3302) HCV84_019840 PF00294 pfkB family carbohydrate kinase HCV84_019845 PF11471 Maltoporin periplasmic N-terminal extension HCV84_019845 PF02264 LamB porin HCV84_019850 PF02378 Phosphotransferase system, EIIC HCV84_019850 PF00367 phosphotransferase system, EIIB HCV84_019855 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCV84_019855 PF08244 Glycosyl hydrolases family 32 C terminal HCV84_019860 PF00356 Bacterial regulatory proteins, lacI family HCV84_019860 PF13407 Periplasmic binding protein domain HCV84_019870 PF02653 Branched-chain amino acid transport system / permease component HCV84_019875 PF00005 ABC transporter HCV84_019880 PF13407 Periplasmic binding protein domain HCV84_019885 PF00356 Bacterial regulatory proteins, lacI family HCV84_019890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_019890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_019895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_019895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_019900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_019900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_019905 PF01261 Xylose isomerase-like TIM barrel HCV84_019915 PF00152 tRNA synthetases class II (D, K and N) HCV84_019915 PF01336 OB-fold nucleic acid binding domain HCV84_019920 PF00854 POT family HCV84_019925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HCV84_019925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCV84_019925 PF01276 Orn/Lys/Arg decarboxylase, major domain HCV84_019930 PF13520 Amino acid permease HCV84_019935 PF00486 Transcriptional regulatory protein, C terminal HCV84_019935 PF18500 CadC C-terminal domain 1 HCV84_019945 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV84_019955 PF00285 Citrate synthase, C-terminal domain HCV84_019970 PF00576 HIUase/Transthyretin family HCV84_020030 PF03869 Arc-like DNA binding domain HCV84_020205 PF06440 DNA polymerase III, theta subunit HCV84_020355 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HCV84_020355 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HCV84_020365 PF01406 tRNA synthetases class I (C) catalytic domain HCV84_020365 PF09190 DALR domain HCV84_020370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HCV84_020375 PF00149 Calcineurin-like phosphoesterase HCV84_020385 PF00731 AIR carboxylase HCV84_020390 PF02222 ATP-grasp domain HCV84_020390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HCV84_020400 PF00267 Gram-negative porin HCV84_020415 PF00005 ABC transporter HCV84_020420 PF13472 GDSL-like Lipase/Acylhydrolase family HCV84_020425 PF00106 short chain dehydrogenase HCV84_020430 PF00085 Thioredoxin HCV84_020435 PF03649 Uncharacterised protein family (UPF0014) HCV84_020440 PF00005 ABC transporter HCV84_020445 PF16200 C-terminal region of band_7 HCV84_020445 PF01145 SPFH domain / Band 7 family HCV84_020450 PF01957 NfeD-like C-terminal, partner-binding HCV84_020455 PF13411 MerR HTH family regulatory protein HCV84_020460 PF00403 Heavy-metal-associated domain HCV84_020465 PF01963 TraB family HCV84_020470 PF04073 Aminoacyl-tRNA editing domain HCV84_020475 PF00149 Calcineurin-like phosphoesterase HCV84_020475 PF02872 5'-nucleotidase, C-terminal domain HCV84_020480 PF07690 Major Facilitator Superfamily HCV84_020485 PF02254 TrkA-N domain HCV84_020485 PF00999 Sodium/hydrogen exchanger family HCV84_020490 PF00294 pfkB family carbohydrate kinase HCV84_020495 PF00762 Ferrochelatase HCV84_020500 PF05191 Adenylate kinase, active site lid HCV84_020505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_020505 PF00183 Hsp90 protein HCV84_020510 PF13662 Toprim domain HCV84_020510 PF02132 RecR protein HCV84_020515 PF02575 YbaB/EbfC DNA-binding family HCV84_020520 PF12169 DNA polymerase III subunits gamma and tau domain III HCV84_020520 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HCV84_020520 PF12170 DNA polymerase III tau subunit V interacting with alpha HCV84_020525 PF00156 Phosphoribosyl transferase domain HCV84_020530 PF04304 Protein of unknown function (DUF454) HCV84_020535 PF07445 Primosomal replication protein priC HCV84_020540 PF10689 Protein of unknown function (DUF2496) HCV84_020545 PF04754 Putative transposase, YhgA-like HCV84_020550 PF12795 Mechanosensitive ion channel porin domain HCV84_020550 PF12794 Mechanosensitive ion channel inner membrane domain 1 HCV84_020550 PF00924 Mechanosensitive ion channel HCV84_020560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_020560 PF00529 HlyD membrane-fusion protein of T1SS HCV84_020565 PF00873 AcrB/AcrD/AcrF family HCV84_020570 PF10757 Biofilm formation regulator YbaJ HCV84_020575 PF05321 Haemolysin expression modulating protein HCV84_020580 PF12464 Maltose acetyltransferase HCV84_020580 PF14602 Hexapeptide repeat of succinyl-transferase HCV84_020590 PF10777 Inner membrane protein YlaC HCV84_020595 PF00392 Bacterial regulatory proteins, gntR family HCV84_020595 PF00155 Aminotransferase class I and II HCV84_020605 PF00444 Ribosomal protein L36 HCV84_020610 PF01197 Ribosomal protein L31 HCV84_020615 PF00356 Bacterial regulatory proteins, lacI family HCV84_020620 PF02264 LamB porin HCV84_020625 PF02378 Phosphotransferase system, EIIC HCV84_020625 PF00367 phosphotransferase system, EIIB HCV84_020630 PF02449 Beta-galactosidase HCV84_020630 PF08532 Beta-galactosidase trimerisation domain HCV84_020630 PF08533 Beta-galactosidase C-terminal domain HCV84_020635 PF07745 Glycosyl hydrolase family 53 HCV84_020640 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_020645 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_020650 PF13416 Bacterial extracellular solute-binding protein HCV84_020655 PF00005 ABC transporter HCV84_020655 PF17912 MalK OB fold domain HCV84_020660 PF00563 EAL domain HCV84_020660 PF12792 CSS motif domain associated with EAL HCV84_020665 PF02583 Metal-sensitive transcriptional repressor HCV84_020670 PF03824 High-affinity nickel-transport protein HCV84_020705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV84_020710 PF09619 Type III secretion system lipoprotein chaperone (YscW) HCV84_020720 PF00909 Ammonium Transporter Family HCV84_020725 PF00543 Nitrogen regulatory protein P-II HCV84_020730 PF00005 ABC transporter HCV84_020730 PF00664 ABC transporter transmembrane region HCV84_020735 PF00005 ABC transporter HCV84_020735 PF00664 ABC transporter transmembrane region HCV84_020740 PF01037 Lrp/AsnC ligand binding domain HCV84_020740 PF13404 AsnC-type helix-turn-helix domain HCV84_020745 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_020755 PF12793 Sugar transport-related sRNA regulator N-term HCV84_020755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_020760 PF06508 Queuosine biosynthesis protein QueC HCV84_020775 PF13145 PPIC-type PPIASE domain HCV84_020780 PF00216 Bacterial DNA-binding protein HCV84_020785 PF02190 ATP-dependent protease La (LON) substrate-binding domain HCV84_020785 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_020785 PF05362 Lon protease (S16) C-terminal proteolytic domain HCV84_020790 PF07724 AAA domain (Cdc48 subfamily) HCV84_020790 PF10431 C-terminal, D2-small domain, of ClpB protein HCV84_020790 PF06689 ClpX C4-type zinc finger HCV84_020795 PF00574 Clp protease HCV84_020800 PF05698 Bacterial trigger factor protein (TF) C-terminus HCV84_020800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV84_020800 PF05697 Bacterial trigger factor protein (TF) HCV84_020805 PF01722 BolA-like protein HCV84_020810 PF03923 Uncharacterized lipoprotein HCV84_020810 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HCV84_020815 PF07690 Major Facilitator Superfamily HCV84_020820 PF06481 COX Aromatic Rich Motif HCV84_020820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HCV84_020825 PF00115 Cytochrome C and Quinol oxidase polypeptide I HCV84_020830 PF00510 Cytochrome c oxidase subunit III HCV84_020835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HCV84_020840 PF01040 UbiA prenyltransferase family HCV84_020850 PF01614 Bacterial transcriptional regulator HCV84_020850 PF09339 IclR helix-turn-helix domain HCV84_020855 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV84_020855 PF08501 Shikimate dehydrogenase substrate binding domain HCV84_020855 PF01488 Shikimate / quinate 5-dehydrogenase HCV84_020860 PF00890 FAD binding domain HCV84_020870 PF00890 FAD binding domain HCV84_020880 PF07690 Major Facilitator Superfamily HCV84_020885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_020885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_020890 PF07690 Major Facilitator Superfamily HCV84_020895 PF04461 Protein of unknown function (DUF520) HCV84_020900 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCV84_020900 PF02558 Ketopantoate reductase PanE/ApbA HCV84_020905 PF01965 DJ-1/PfpI family HCV84_020915 PF02568 Thiamine biosynthesis protein (ThiI) HCV84_020915 PF02926 THUMP domain HCV84_020920 PF02609 Exonuclease VII small subunit HCV84_020925 PF00348 Polyprenyl synthetase HCV84_020930 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HCV84_020930 PF02780 Transketolase, C-terminal domain HCV84_020930 PF02779 Transketolase, pyrimidine binding domain HCV84_020935 PF00248 Aldo/keto reductase family HCV84_020940 PF04608 Phosphatidylglycerophosphatase A HCV84_020945 PF02769 AIR synthase related protein, C-terminal domain HCV84_020945 PF00586 AIR synthase related protein, N-terminal domain HCV84_020950 PF01029 NusB family HCV84_020955 PF00885 6,7-dimethyl-8-ribityllumazine synthase HCV84_020960 PF01872 RibD C-terminal domain HCV84_020960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCV84_020965 PF03477 ATP cone domain HCV84_020970 PF11622 Protein of unknown function (DUF3251) HCV84_020975 PF03502 Nucleoside-specific channel-forming protein, Tsx HCV84_020990 PF07549 SecD/SecF GG Motif HCV84_020990 PF02355 Protein export membrane protein HCV84_020995 PF07549 SecD/SecF GG Motif HCV84_020995 PF02355 Protein export membrane protein HCV84_020995 PF13721 SecD export protein N-terminal TM region HCV84_021000 PF02699 Preprotein translocase subunit HCV84_021005 PF01702 Queuine tRNA-ribosyltransferase HCV84_021010 PF02547 Queuosine biosynthesis protein HCV84_021020 PF04336 Acyl carrier protein phosphodiesterase HCV84_021025 PF10417 C-terminal domain of 1-Cys peroxiredoxin HCV84_021025 PF00578 AhpC/TSA family HCV84_021035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_021045 PF03611 PTS system sugar-specific permease component HCV84_021050 PF00294 pfkB family carbohydrate kinase HCV84_021055 PF01116 Fructose-bisphosphate aldolase class-II HCV84_021060 PF01979 Amidohydrolase family HCV84_021070 PF00857 Isochorismatase family HCV84_021075 PF03466 LysR substrate binding domain HCV84_021075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_021080 PF02903 Alpha amylase, N-terminal ig-like domain HCV84_021080 PF00128 Alpha amylase, catalytic domain HCV84_021085 PF00324 Amino acid permease HCV84_021090 PF05525 Branched-chain amino acid transport protein HCV84_021095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_021095 PF00512 His Kinase A (phospho-acceptor) domain HCV84_021095 PF11808 Phosphate regulon sensor protein PhoR HCV84_021095 PF00989 PAS fold HCV84_021100 PF00072 Response regulator receiver domain HCV84_021100 PF00486 Transcriptional regulatory protein, C terminal HCV84_021105 PF00149 Calcineurin-like phosphoesterase HCV84_021105 PF12320 Type 5 capsule protein repressor C-terminal domain HCV84_021110 PF13476 AAA domain HCV84_021115 PF00480 ROK family HCV84_021120 PF04381 Putative exonuclease, RdgC HCV84_021125 PF06865 Pyrimidine/purine nucleoside phosphorylase HCV84_021130 PF07302 AroM protein HCV84_021135 PF16362 YaiA protein HCV84_021140 PF01202 Shikimate kinase HCV84_021145 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) HCV84_021150 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HCV84_021155 PF03807 NADP oxidoreductase coenzyme F420-dependent HCV84_021155 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCV84_021160 PF07769 psiF repeat HCV84_021165 PF00245 Alkaline phosphatase HCV84_021170 PF10796 Sigma-S stabilisation anti-adaptor protein HCV84_021175 PF07690 Major Facilitator Superfamily HCV84_021185 PF01820 D-ala D-ala ligase N-terminus HCV84_021185 PF07478 D-ala D-ala ligase C-terminus HCV84_021190 PF10953 Protein of unknown function (DUF2754) HCV84_021195 PF10954 Protein of unknown function (DUF2755) HCV84_021200 PF07759 Protein of unknown function (DUF1615) HCV84_021205 PF05992 SbmA/BacA-like family HCV84_021210 PF00857 Isochorismatase family HCV84_021215 PF00144 Beta-lactamase HCV84_021220 PF00490 Delta-aminolevulinic acid dehydratase HCV84_021235 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HCV84_021240 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_021245 PF00005 ABC transporter HCV84_021250 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCV84_021255 PF02574 Homocysteine S-methyltransferase HCV84_021260 PF00324 Amino acid permease HCV84_021270 PF00324 Amino acid permease HCV84_021275 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HCV84_021280 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HCV84_021290 PF13458 Periplasmic binding protein HCV84_021295 PF02653 Branched-chain amino acid transport system / permease component HCV84_021300 PF02653 Branched-chain amino acid transport system / permease component HCV84_021300 PF11862 Domain of unknown function (DUF3382) HCV84_021305 PF00005 ABC transporter HCV84_021305 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV84_021310 PF00005 ABC transporter HCV84_021320 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_021325 PF00005 ABC transporter HCV84_021330 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_021335 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_021350 PF15976 CS1-pili formation C-terminal HCV84_021350 PF16967 E-set like domain HCV84_021355 PF18649 EcpB C-terminal domain HCV84_021360 PF16449 Fimbrillin MatB HCV84_021365 PF00196 Bacterial regulatory proteins, luxR family HCV84_021370 PF00005 ABC transporter HCV84_021380 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_021385 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_021400 PF00877 NlpC/P60 family HCV84_021405 PF00267 Gram-negative porin HCV84_021410 PF01472 PUA domain HCV84_021410 PF00696 Amino acid kinase family HCV84_021415 PF00171 Aldehyde dehydrogenase family HCV84_021425 PF00271 Helicase conserved C-terminal domain HCV84_021425 PF00176 SNF2 family N-terminal domain HCV84_021425 PF12419 SNF2 Helicase protein HCV84_021450 PF00196 Bacterial regulatory proteins, luxR family HCV84_021450 PF17874 MalT-like TPR region HCV84_021455 PF00676 Dehydrogenase E1 component HCV84_021460 PF02779 Transketolase, pyrimidine binding domain HCV84_021460 PF02780 Transketolase, C-terminal domain HCV84_021465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCV84_021465 PF00364 Biotin-requiring enzyme HCV84_021465 PF02817 e3 binding domain HCV84_021470 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_021470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV84_021480 PF01791 DeoC/LacD family aldolase HCV84_021490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_021490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_021500 PF01842 ACT domain HCV84_021500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_021500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_021505 PF03611 PTS system sugar-specific permease component HCV84_021510 PF13417 Glutathione S-transferase, N-terminal domain HCV84_021510 PF00043 Glutathione S-transferase, C-terminal domain HCV84_021515 PF13847 Methyltransferase domain HCV84_021520 PF09857 Putative toxin of bacterial toxin-antitoxin pair HCV84_021525 PF08943 CsiD HCV84_021530 PF01266 FAD dependent oxidoreductase HCV84_021535 PF00171 Aldehyde dehydrogenase family HCV84_021540 PF00202 Aminotransferase class-III HCV84_021545 PF00324 Amino acid permease HCV84_021550 PF07729 FCD domain HCV84_021550 PF00392 Bacterial regulatory proteins, gntR family HCV84_021555 PF07417 Sigma factor-binding transcriptional regulator Crl HCV84_021560 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) HCV84_021565 PF00156 Phosphoribosyl transferase domain HCV84_021570 PF07687 Peptidase dimerisation domain HCV84_021570 PF01546 Peptidase family M20/M25/M40 HCV84_021575 PF13673 Acetyltransferase (GNAT) domain HCV84_021580 PF11799 impB/mucB/samB family C-terminal domain HCV84_021580 PF00817 impB/mucB/samB family HCV84_021580 PF11798 IMS family HHH motif HCV84_021585 PF03009 Glycerophosphoryl diester phosphodiesterase family HCV84_021590 PF04400 (Na+)-NQR maturation NqrM HCV84_021595 PF00970 Oxidoreductase FAD-binding domain HCV84_021595 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV84_021595 PF00175 Oxidoreductase NAD-binding domain HCV84_021600 PF02508 Rnf-Nqr subunit, membrane protein HCV84_021605 PF02508 Rnf-Nqr subunit, membrane protein HCV84_021610 PF04205 FMN-binding domain HCV84_021615 PF03116 NQR2, RnfD, RnfE family HCV84_021620 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HCV84_021620 PF11973 NQRA C-terminal domain HCV84_021625 PF03734 L,D-transpeptidase catalytic domain HCV84_021630 PF13230 Glutamine amidotransferases class-II HCV84_021635 PF13580 SIS domain HCV84_021640 PF09317 Domain of unknown function (DUF1974) HCV84_021640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCV84_021640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCV84_021640 PF02770 Acyl-CoA dehydrogenase, middle domain HCV84_021645 PF00795 Carbon-nitrogen hydrolase HCV84_021650 PF01810 LysE type translocator HCV84_021655 PF03466 LysR substrate binding domain HCV84_021655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_021665 PF00929 Exonuclease HCV84_021670 PF00075 RNase H HCV84_021675 PF08241 Methyltransferase domain HCV84_021680 PF16123 Hydroxyacylglutathione hydrolase C-terminus HCV84_021680 PF00753 Metallo-beta-lactamase superfamily HCV84_021685 PF01464 Transglycosylase SLT domain HCV84_021685 PF01476 LysM domain HCV84_021690 PF08241 Methyltransferase domain HCV84_021695 PF03372 Endonuclease/Exonuclease/phosphatase family HCV84_021700 PF07690 Major Facilitator Superfamily HCV84_021705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_021705 PF03466 LysR substrate binding domain HCV84_021710 PF00248 Aldo/keto reductase family HCV84_021750 PF09383 NIL domain HCV84_021750 PF00005 ABC transporter HCV84_021755 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_021760 PF03180 NLPA lipoprotein HCV84_021765 PF16358 RcsF lipoprotein HCV84_021770 PF01980 tRNA-methyltransferase O HCV84_021770 PF18389 TrmO C-terminal domain HCV84_021775 PF03129 Anticodon binding domain HCV84_021775 PF04073 Aminoacyl-tRNA editing domain HCV84_021775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCV84_021780 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HCV84_021785 PF04170 NlpE N-terminal domain HCV84_021785 PF17185 NlpE C-terminal OB domain HCV84_021790 PF00472 RF-1 domain HCV84_021795 PF07152 YaeQ protein HCV84_021800 PF06786 Uncharacterised protein family (UPF0253) HCV84_021805 PF07073 Modulator of Rho-dependent transcription termination (ROF) HCV84_021810 PF01171 PP-loop family HCV84_021810 PF09179 TilS substrate binding domain HCV84_021810 PF11734 TilS substrate C-terminal domain HCV84_021815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV84_021820 PF01276 Orn/Lys/Arg decarboxylase, major domain HCV84_021820 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HCV84_021820 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCV84_021825 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HCV84_021830 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCV84_021830 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCV84_021830 PF14579 Helix-hairpin-helix motif HCV84_021830 PF02811 PHP domain HCV84_021830 PF01336 OB-fold nucleic acid binding domain HCV84_021835 PF01351 Ribonuclease HII HCV84_021840 PF02684 Lipid-A-disaccharide synthetase HCV84_021845 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_021845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HCV84_021850 PF07977 FabA-like domain HCV84_021855 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_021855 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HCV84_021860 PF03938 Outer membrane protein (OmpH-like) HCV84_021865 PF07244 Surface antigen variable number repeat HCV84_021865 PF01103 Surface antigen HCV84_021870 PF17820 PDZ domain HCV84_021870 PF02163 Peptidase family M50 HCV84_021880 PF01255 Putative undecaprenyl diphosphate synthase HCV84_021885 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HCV84_021885 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HCV84_021885 PF13288 DXP reductoisomerase C-terminal domain HCV84_021890 PF01765 Ribosome recycling factor HCV84_021895 PF00696 Amino acid kinase family HCV84_021900 PF00889 Elongation factor TS HCV84_021905 PF00318 Ribosomal protein S2 HCV84_021910 PF00557 Metallopeptidase family M24 HCV84_021915 PF08335 GlnD PII-uridylyltransferase HCV84_021915 PF01909 Nucleotidyltransferase domain HCV84_021915 PF01966 HD domain HCV84_021915 PF01842 ACT domain HCV84_021920 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HCV84_021920 PF14602 Hexapeptide repeat of succinyl-transferase HCV84_021920 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_021925 PF11944 Protein of unknown function (DUF3461) HCV84_021930 PF05651 Putative sugar diacid recognition HCV84_021930 PF17853 GGDEF-like domain HCV84_021930 PF13556 PucR C-terminal helix-turn-helix domain HCV84_021935 PF00595 PDZ domain HCV84_021940 PF13286 Phosphohydrolase-associated domain HCV84_021940 PF01966 HD domain HCV84_021945 PF01048 Phosphorylase superfamily HCV84_021950 PF01497 Periplasmic binding protein HCV84_021955 PF03458 UPF0126 domain HCV84_021960 PF01521 Iron-sulphur cluster biosynthesis HCV84_021965 PF00654 Voltage gated chloride channel HCV84_021970 PF00202 Aminotransferase class-III HCV84_021975 PF01032 FecCD transport family HCV84_021980 PF01497 Periplasmic binding protein HCV84_021985 PF00005 ABC transporter HCV84_021990 PF00593 TonB dependent receptor HCV84_021990 PF07715 TonB-dependent Receptor Plug Domain HCV84_021995 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal HCV84_021995 PF00912 Transglycosylase HCV84_021995 PF00905 Penicillin binding protein transpeptidase domain HCV84_021995 PF14814 Bifunctional transglycosylase second domain HCV84_022000 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HCV84_022005 PF16537 Type II secretion system protein B HCV84_022010 PF17967 Pullulanase N2 domain HCV84_022010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV84_022010 PF18494 Pullulanase Ins domain HCV84_022010 PF11852 Domain of unknown function (DUF3372) HCV84_022010 PF03714 Bacterial pullanase-associated domain HCV84_022020 PF11356 Type II secretion system protein C HCV84_022025 PF00263 Bacterial type II and III secretion system protein HCV84_022025 PF03958 Bacterial type II/III secretion system short domain HCV84_022030 PF00437 Type II/IV secretion system protein HCV84_022035 PF00482 Type II secretion system (T2SS), protein F HCV84_022040 PF07963 Prokaryotic N-terminal methylation motif HCV84_022040 PF08334 Type II secretion system (T2SS), protein G HCV84_022045 PF07963 Prokaryotic N-terminal methylation motif HCV84_022050 PF07963 Prokaryotic N-terminal methylation motif HCV84_022050 PF02501 Type II secretion system (T2SS), protein I HCV84_022055 PF07963 Prokaryotic N-terminal methylation motif HCV84_022055 PF11612 Type II secretion system (T2SS), protein J HCV84_022060 PF03934 Type II secretion system (T2SS), protein K HCV84_022065 PF12693 GspL periplasmic domain HCV84_022065 PF05134 Type II secretion system (T2SS), protein L HCV84_022070 PF04612 Type II secretion system (T2SS), protein M HCV84_022075 PF01203 Type II secretion system (T2SS), protein N HCV84_022080 PF06750 Bacterial Peptidase A24 N-terminal domain HCV84_022080 PF01478 Type IV leader peptidase family HCV84_022085 PF00270 DEAD/DEAH box helicase HCV84_022085 PF04408 Helicase associated domain (HA2) HCV84_022085 PF00271 Helicase conserved C-terminal domain HCV84_022085 PF08482 ATP-dependent helicase C-terminal HCV84_022090 PF02834 LigT like Phosphoesterase HCV84_022095 PF03749 Sugar fermentation stimulation protein RE domain HCV84_022095 PF17746 SfsA N-terminal OB domain HCV84_022100 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCV84_022105 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCV84_022110 PF01743 Poly A polymerase head domain HCV84_022110 PF12626 Polymerase A arginine-rich C-terminus HCV84_022110 PF12627 Probable RNA and SrmB- binding site of polymerase A HCV84_022115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HCV84_022120 PF02548 Ketopantoate hydroxymethyltransferase HCV84_022125 PF02569 Pantoate-beta-alanine ligase HCV84_022130 PF02261 Aspartate decarboxylase HCV84_022135 PF01522 Polysaccharide deacetylase HCV84_022140 PF03610 PTS system fructose IIA component HCV84_022145 PF01061 ABC-2 type transporter HCV84_022150 PF00005 ABC transporter HCV84_022155 PF00484 Carbonic anhydrase HCV84_022160 PF00156 Phosphoribosyl transferase domain HCV84_022170 PF01011 PQQ enzyme repeat HCV84_022175 PF00394 Multicopper oxidase HCV84_022175 PF07731 Multicopper oxidase HCV84_022175 PF07732 Multicopper oxidase HCV84_022180 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HCV84_022200 PF17284 Spermidine synthase tetramerisation domain HCV84_022205 PF02675 S-adenosylmethionine decarboxylase HCV84_022210 PF06062 Uncharacterised protein family (UPF0231) HCV84_022215 PF06434 Aconitate hydratase 2 N-terminus HCV84_022215 PF11791 Aconitate B N-terminal domain HCV84_022215 PF00330 Aconitase family (aconitate hydratase) HCV84_022220 PF11737 Protein of unknown function (DUF3300) HCV84_022235 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_022235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV84_022240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCV84_022240 PF00364 Biotin-requiring enzyme HCV84_022240 PF02817 e3 binding domain HCV84_022245 PF00456 Transketolase, thiamine diphosphate binding domain HCV84_022245 PF17831 Pyruvate dehydrogenase E1 component middle domain HCV84_022250 PF00392 Bacterial regulatory proteins, gntR family HCV84_022250 PF07729 FCD domain HCV84_022255 PF00324 Amino acid permease HCV84_022265 PF04616 Glycosyl hydrolases family 43 HCV84_022265 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain HCV84_022270 PF17113 Regulatory signalling modulator protein AmpE HCV84_022275 PF01510 N-acetylmuramoyl-L-alanine amidase HCV84_022280 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HCV84_022280 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HCV84_022285 PF07963 Prokaryotic N-terminal methylation motif HCV84_022290 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HCV84_022290 PF00437 Type II/IV secretion system protein HCV84_022295 PF00482 Type II secretion system (T2SS), protein F HCV84_022300 PF00478 IMP dehydrogenase / GMP reductase domain HCV84_022305 PF01121 Dephospho-CoA kinase HCV84_022310 PF07072 Cell division protein HCV84_022315 PF03884 DNA gyrase inhibitor YacG HCV84_022320 PF00293 NUDIX domain HCV84_022325 PF07516 SecA Wing and Scaffold domain HCV84_022325 PF01043 SecA preprotein cross-linking domain HCV84_022325 PF07517 SecA DEAD-like domain HCV84_022325 PF02810 SEC-C motif HCV84_022330 PF06558 Secretion monitor precursor protein (SecM) HCV84_022335 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HCV84_022340 PF12327 FtsZ family, C-terminal domain HCV84_022340 PF00091 Tubulin/FtsZ family, GTPase domain HCV84_022345 PF02491 SHS2 domain inserted in FTSA HCV84_022350 PF03799 Cell division protein FtsQ HCV84_022350 PF08478 POTRA domain, FtsQ-type HCV84_022355 PF07478 D-ala D-ala ligase C-terminus HCV84_022355 PF01820 D-ala D-ala ligase N-terminus HCV84_022360 PF02875 Mur ligase family, glutamate ligase domain HCV84_022360 PF01225 Mur ligase family, catalytic domain HCV84_022360 PF08245 Mur ligase middle domain HCV84_022365 PF03033 Glycosyltransferase family 28 N-terminal domain HCV84_022365 PF04101 Glycosyltransferase family 28 C-terminal domain HCV84_022370 PF01098 Cell cycle protein HCV84_022375 PF02875 Mur ligase family, glutamate ligase domain HCV84_022375 PF08245 Mur ligase middle domain HCV84_022380 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HCV84_022380 PF00953 Glycosyl transferase family 4 HCV84_022385 PF01225 Mur ligase family, catalytic domain HCV84_022385 PF02875 Mur ligase family, glutamate ligase domain HCV84_022385 PF08245 Mur ligase middle domain HCV84_022390 PF01225 Mur ligase family, catalytic domain HCV84_022390 PF02875 Mur ligase family, glutamate ligase domain HCV84_022390 PF08245 Mur ligase middle domain HCV84_022395 PF03717 Penicillin-binding Protein dimerisation domain HCV84_022395 PF00905 Penicillin binding protein transpeptidase domain HCV84_022400 PF04999 Cell division protein FtsL HCV84_022405 PF01795 MraW methylase family HCV84_022410 PF02381 MraZ protein, putative antitoxin-like HCV84_022415 PF00356 Bacterial regulatory proteins, lacI family HCV84_022415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV84_022420 PF10369 Small subunit of acetolactate synthase HCV84_022425 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_022425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_022425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_022430 PF03466 LysR substrate binding domain HCV84_022430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_022440 PF08502 LeuA allosteric (dimerisation) domain HCV84_022440 PF00682 HMGL-like HCV84_022445 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV84_022450 PF00330 Aconitase family (aconitate hydratase) HCV84_022455 PF00694 Aconitase C-terminal domain HCV84_022460 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_022460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV84_022465 PF08501 Shikimate dehydrogenase substrate binding domain HCV84_022465 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV84_022470 PF07690 Major Facilitator Superfamily HCV84_022475 PF01487 Type I 3-dehydroquinase HCV84_022480 PF03466 LysR substrate binding domain HCV84_022480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_022485 PF07690 Major Facilitator Superfamily HCV84_022490 PF07690 Major Facilitator Superfamily HCV84_022500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_022500 PF12793 Sugar transport-related sRNA regulator N-term HCV84_022510 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_022515 PF00005 ABC transporter HCV84_022520 PF09335 SNARE associated Golgi protein HCV84_022525 PF12833 Helix-turn-helix domain HCV84_022525 PF02311 AraC-like ligand binding domain HCV84_022530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_022535 PF02610 L-arabinose isomerase HCV84_022535 PF11762 L-arabinose isomerase C-terminal domain HCV84_022540 PF00596 Class II Aldolase and Adducin N-terminal domain HCV84_022545 PF00136 DNA polymerase family B HCV84_022545 PF03104 DNA polymerase family B, exonuclease domain HCV84_022550 PF18337 RapA N-terminal Tudor like domain HCV84_022550 PF18339 RapA N-terminal Tudor like domain 1 HCV84_022550 PF12137 RNA polymerase recycling family C-terminal HCV84_022550 PF00176 SNF2 family N-terminal domain HCV84_022550 PF00271 Helicase conserved C-terminal domain HCV84_022555 PF00849 RNA pseudouridylate synthase HCV84_022560 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HCV84_022565 PF03390 2-hydroxycarboxylate transporter family HCV84_022570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_022570 PF17203 Single cache domain 3 HCV84_022575 PF00072 Response regulator receiver domain HCV84_022575 PF12431 Transcriptional regulator HCV84_022580 PF05099 Tellurite resistance protein TerB HCV84_022580 PF00226 DnaJ domain HCV84_022585 PF04453 LPS transport system D HCV84_022585 PF03968 OstA-like protein HCV84_022590 PF00639 PPIC-type PPIASE domain HCV84_022590 PF09312 SurA N-terminal domain HCV84_022595 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HCV84_022600 PF00398 Ribosomal RNA adenine dimethylase HCV84_022605 PF04379 ApaG domain HCV84_022610 PF00149 Calcineurin-like phosphoesterase HCV84_022615 PF00186 Dihydrofolate reductase HCV84_022620 PF00999 Sodium/hydrogen exchanger family HCV84_022620 PF02254 TrkA-N domain HCV84_022625 PF02525 Flavodoxin-like fold HCV84_022630 PF06004 Bacterial protein of unknown function (DUF903) HCV84_022635 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HCV84_022635 PF02142 MGS-like domain HCV84_022635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCV84_022640 PF00117 Glutamine amidotransferase class-I HCV84_022640 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HCV84_022645 PF05173 Dihydrodipicolinate reductase, C-terminus HCV84_022645 PF01113 Dihydrodipicolinate reductase, N-terminus HCV84_022650 PF02272 DHHA1 domain HCV84_022650 PF01411 tRNA synthetases class II (A) HCV84_022650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCV84_022655 PF03466 LysR substrate binding domain HCV84_022655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_022660 PF05656 Protein of unknown function (DUF805) HCV84_022665 PF01156 Inosine-uridine preferring nucleoside hydrolase HCV84_022670 PF02401 LytB protein HCV84_022675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV84_022680 PF01252 Signal peptidase (SPase) II HCV84_022685 PF08264 Anticodon-binding domain of tRNA HCV84_022685 PF00133 tRNA synthetases class I (I, L, M and V) HCV84_022685 PF06827 Zinc finger found in FPG and IleRS HCV84_022690 PF06574 FAD synthetase HCV84_022690 PF01687 Riboflavin kinase HCV84_022695 PF01649 Ribosomal protein S20 HCV84_022700 PF03466 LysR substrate binding domain HCV84_022700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_022705 PF06965 Na+/H+ antiporter 1 HCV84_022710 PF00684 DnaJ central domain HCV84_022710 PF01556 DnaJ C terminal domain HCV84_022710 PF00226 DnaJ domain HCV84_022715 PF00012 Hsp70 protein HCV84_022720 PF10807 Protein of unknown function (DUF2541) HCV84_022725 PF13099 Domain of unknown function (DUF3944) HCV84_022725 PF03981 Ubiquinol-cytochrome C chaperone HCV84_022730 PF01184 GPR1/FUN34/yaaH family HCV84_022735 PF07690 Major Facilitator Superfamily HCV84_022740 PF00994 Probable molybdopterin binding domain HCV84_022745 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCV84_022750 PF01235 Sodium:alanine symporter family HCV84_022755 PF03883 Peroxide stress protein YaaA HCV84_022765 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_022765 PF14821 Threonine synthase N terminus HCV84_022770 PF08544 GHMP kinases C terminal HCV84_022770 PF00288 GHMP kinases N terminal domain HCV84_022775 PF00696 Amino acid kinase family HCV84_022775 PF01842 ACT domain HCV84_022775 PF13840 ACT domain HCV84_022775 PF00742 Homoserine dehydrogenase HCV84_022775 PF03447 Homoserine dehydrogenase, NAD binding domain HCV84_022780 PF08254 Threonine leader peptide HCV84_022795 PF00486 Transcriptional regulatory protein, C terminal HCV84_022795 PF00072 Response regulator receiver domain HCV84_022800 PF06123 Inner membrane protein CreD HCV84_022805 PF00512 His Kinase A (phospho-acceptor) domain HCV84_022805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_022805 PF00672 HAMP domain HCV84_022810 PF00072 Response regulator receiver domain HCV84_022810 PF00486 Transcriptional regulatory protein, C terminal HCV84_022815 PF05981 CreA protein HCV84_022820 PF12833 Helix-turn-helix domain HCV84_022820 PF06445 GyrI-like small molecule binding domain HCV84_022825 PF00300 Histidine phosphatase superfamily (branch 1) HCV84_022830 PF01931 Protein of unknown function DUF84 HCV84_022835 PF01371 Trp repressor protein HCV84_022840 PF14718 Soluble lytic murein transglycosylase L domain HCV84_022840 PF01464 Transglycosylase SLT domain HCV84_022845 PF12848 ABC transporter HCV84_022845 PF00005 ABC transporter HCV84_022850 PF13521 AAA domain HCV84_022850 PF01381 Helix-turn-helix HCV84_022855 PF18073 Rubredoxin metal binding domain HCV84_022860 PF18429 Domain of unknown function (DUF5609) HCV84_022865 PF10144 Bacterial virulence factor haemolysin HCV84_022870 PF03099 Biotin/lipoate A/B protein ligase family HCV84_022870 PF10437 Bacterial lipoate protein ligase C-terminus HCV84_022875 PF01048 Phosphorylase superfamily HCV84_022880 PF01676 Metalloenzyme superfamily HCV84_022885 PF02885 Glycosyl transferase family, helical bundle domain HCV84_022885 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HCV84_022885 PF00591 Glycosyl transferase family, a/b domain HCV84_022890 PF01791 DeoC/LacD family aldolase HCV84_022895 PF07670 Nucleoside recognition HCV84_022895 PF07662 Na+ dependent nucleoside transporter C-terminus HCV84_022895 PF01773 Na+ dependent nucleoside transporter N-terminus HCV84_022900 PF01026 TatD related DNase HCV84_022905 PF01734 Patatin-like phospholipase HCV84_022910 PF07043 Protein of unknown function (DUF1328) HCV84_022915 PF04972 BON domain HCV84_022920 PF16658 Class II release factor RF3, C-terminal domain HCV84_022920 PF03144 Elongation factor Tu domain 2 HCV84_022920 PF00009 Elongation factor Tu GTP binding domain HCV84_022925 PF13419 Haloacid dehalogenase-like hydrolase HCV84_022930 PF00583 Acetyltransferase (GNAT) family HCV84_022935 PF03603 DNA polymerase III psi subunit HCV84_022940 PF08468 Methyltransferase small domain N-terminal HCV84_022940 PF05175 Methyltransferase small domain HCV84_022960 PF07256 Protein of unknown function (DUF1435) HCV84_022970 PF00990 Diguanylate cyclase, GGDEF domain HCV84_022975 PF06276 Ferric iron reductase FhuF-like transporter HCV84_022975 PF11575 FhuF 2Fe-2S C-terminal domain HCV84_022980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_022980 PF02378 Phosphotransferase system, EIIC HCV84_022985 PF04073 Aminoacyl-tRNA editing domain HCV84_022990 PF00196 Bacterial regulatory proteins, luxR family HCV84_022995 PF00196 Bacterial regulatory proteins, luxR family HCV84_023005 PF01494 FAD binding domain HCV84_023010 PF06738 Putative threonine/serine exporter HCV84_023015 PF12821 Threonine/Serine exporter, ThrE HCV84_023020 PF17948 DnaT DNA-binding domain HCV84_023025 PF01695 IstB-like ATP binding protein HCV84_023030 PF10696 Protein of unknown function (DUF2501) HCV84_023035 PF00884 Sulfatase HCV84_023040 PF04754 Putative transposase, YhgA-like HCV84_023045 PF01380 SIS domain HCV84_023050 PF01380 SIS domain HCV84_023055 PF03613 PTS system mannose/fructose/sorbose family IID component HCV84_023060 PF03609 PTS system sorbose-specific iic component HCV84_023065 PF03830 PTS system sorbose subfamily IIB component HCV84_023070 PF03610 PTS system fructose IIA component HCV84_023070 PF03830 PTS system sorbose subfamily IIB component HCV84_023075 PF00158 Sigma-54 interaction domain HCV84_023075 PF00874 PRD domain HCV84_023075 PF03610 PTS system fructose IIA component HCV84_023080 PF00583 Acetyltransferase (GNAT) family HCV84_023080 PF00814 Glycoprotease family HCV84_023085 PF00583 Acetyltransferase (GNAT) family HCV84_023090 PF01418 Helix-turn-helix domain, rpiR family HCV84_023090 PF01380 SIS domain HCV84_023095 PF01081 KDPG and KHG aldolase HCV84_023100 PF05035 2-keto-3-deoxy-galactonokinase HCV84_023115 PF07969 Amidohydrolase family HCV84_023130 PF02615 Malate/L-lactate dehydrogenase HCV84_023145 PF01047 MarR family HCV84_023155 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV84_023160 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV84_023165 PF00171 Aldehyde dehydrogenase family HCV84_023170 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HCV84_023175 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase HCV84_023180 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV84_023185 PF03328 HpcH/HpaI aldolase/citrate lyase family HCV84_023190 PF07690 Major Facilitator Superfamily HCV84_023195 PF12833 Helix-turn-helix domain HCV84_023200 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HCV84_023200 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HCV84_023205 PF01613 Flavin reductase like domain HCV84_023220 PF13722 5TM C-terminal transporter carbon starvation CstA HCV84_023220 PF02554 Carbon starvation protein CstA HCV84_023225 PF04328 Selenoprotein, putative HCV84_023230 PF07683 Cobalamin synthesis protein cobW C-terminal domain HCV84_023230 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV84_023240 PF00171 Aldehyde dehydrogenase family HCV84_023245 PF04754 Putative transposase, YhgA-like HCV84_023250 PF02311 AraC-like ligand binding domain HCV84_023250 PF12833 Helix-turn-helix domain HCV84_023260 PF04286 Protein of unknown function (DUF445) HCV84_023265 PF07690 Major Facilitator Superfamily HCV84_023275 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HCV84_023280 PF01869 BadF/BadG/BcrA/BcrD ATPase family HCV84_023285 PF11823 Protein of unknown function (DUF3343) HCV84_023295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_023295 PF00529 HlyD membrane-fusion protein of T1SS HCV84_023305 PF06568 Domain of unknown function (DUF1127) HCV84_023310 PF00155 Aminotransferase class I and II HCV84_023310 PF00392 Bacterial regulatory proteins, gntR family HCV84_023315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV84_023320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_023320 PF03466 LysR substrate binding domain HCV84_023325 PF02525 Flavodoxin-like fold HCV84_023330 PF02653 Branched-chain amino acid transport system / permease component HCV84_023335 PF02653 Branched-chain amino acid transport system / permease component HCV84_023340 PF00005 ABC transporter HCV84_023345 PF13407 Periplasmic binding protein domain HCV84_023350 PF00579 tRNA synthetases class I (W and Y) HCV84_023355 PF00990 Diguanylate cyclase, GGDEF domain HCV84_023360 PF13533 Biotin-lipoyl like HCV84_023365 PF00005 ABC transporter HCV84_023400 PF08007 Cupin superfamily protein HCV84_023415 PF00672 HAMP domain HCV84_023415 PF00512 His Kinase A (phospho-acceptor) domain HCV84_023415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_023420 PF00072 Response regulator receiver domain HCV84_023420 PF00486 Transcriptional regulatory protein, C terminal HCV84_023425 PF02321 Outer membrane efflux protein HCV84_023430 PF11604 Copper binding periplasmic protein CusF HCV84_023435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_023435 PF00529 HlyD membrane-fusion protein of T1SS HCV84_023440 PF00873 AcrB/AcrD/AcrF family HCV84_023450 PF08212 Lipocalin-like domain HCV84_023455 PF13411 MerR HTH family regulatory protein HCV84_023460 PF12680 SnoaL-like domain HCV84_023465 PF00106 short chain dehydrogenase HCV84_023500 PF08349 Protein of unknown function (DUF1722) HCV84_023505 PF02264 LamB porin HCV84_023520 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HCV84_023520 PF04616 Glycosyl hydrolases family 43 HCV84_023540 PF00535 Glycosyl transferase family 2 HCV84_023590 PF04471 Restriction endonuclease HCV84_023590 PF14338 Mrr N-terminal domain HCV84_023605 PF01420 Type I restriction modification DNA specificity domain HCV84_023610 PF02384 N-6 DNA Methylase HCV84_023615 PF00271 Helicase conserved C-terminal domain HCV84_023615 PF04851 Type III restriction enzyme, res subunit HCV84_023615 PF08463 EcoEI R protein C-terminal HCV84_023615 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HCV84_023620 PF13356 Arm DNA-binding domain HCV84_023620 PF00589 Phage integrase family HCV84_023690 PF00589 Phage integrase family HCV84_023690 PF13356 Arm DNA-binding domain HCV84_023700 PF00484 Carbonic anhydrase HCV84_023705 PF00916 Sulfate permease family HCV84_023705 PF01740 STAS domain HCV84_023710 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_023710 PF00107 Zinc-binding dehydrogenase HCV84_023715 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_023720 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_023725 PF00149 Calcineurin-like phosphoesterase HCV84_023730 PF00005 ABC transporter HCV84_023730 PF17912 MalK OB fold domain HCV84_023735 PF13416 Bacterial extracellular solute-binding protein HCV84_023740 PF01261 Xylose isomerase-like TIM barrel HCV84_023745 PF01261 Xylose isomerase-like TIM barrel HCV84_023750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV84_023750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV84_023755 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_023755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_023755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_023760 PF00294 pfkB family carbohydrate kinase HCV84_023765 PF02685 Glucokinase HCV84_023765 PF01418 Helix-turn-helix domain, rpiR family HCV84_023765 PF01380 SIS domain HCV84_023770 PF04962 KduI/IolB family HCV84_023775 PF00171 Aldehyde dehydrogenase family HCV84_023785 PF05872 Bacterial protein of unknown function (DUF853) HCV84_023790 PF03739 Lipopolysaccharide export system permease LptF/LptG HCV84_023795 PF03739 Lipopolysaccharide export system permease LptF/LptG HCV84_023800 PF00883 Cytosol aminopeptidase family, catalytic domain HCV84_023800 PF02789 Cytosol aminopeptidase family, N-terminal domain HCV84_023805 PF04364 DNA polymerase III chi subunit, HolC HCV84_023810 PF00133 tRNA synthetases class I (I, L, M and V) HCV84_023810 PF08264 Anticodon-binding domain of tRNA HCV84_023810 PF10458 Valyl tRNA synthetase tRNA binding arm HCV84_023815 PF00583 Acetyltransferase (GNAT) family HCV84_023820 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HCV84_023825 PF06877 Regulator of ribonuclease activity B HCV84_023830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCV84_023830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCV84_023835 PF04074 YhcH/YjgK/YiaL HCV84_023845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCV84_023845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCV84_023850 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HCV84_023850 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HCV84_023855 PF01042 Endoribonuclease L-PSP HCV84_023860 PF00689 Cation transporting ATPase, C-terminus HCV84_023860 PF00690 Cation transporter/ATPase, N-terminus HCV84_023865 PF00356 Bacterial regulatory proteins, lacI family HCV84_023870 PF02378 Phosphotransferase system, EIIC HCV84_023870 PF00367 phosphotransferase system, EIIB HCV84_023875 PF11941 Domain of unknown function (DUF3459) HCV84_023875 PF00128 Alpha amylase, catalytic domain HCV84_023880 PF02378 Phosphotransferase system, EIIC HCV84_023885 PF02056 Family 4 glycosyl hydrolase HCV84_023885 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV84_023890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_023905 PF03477 ATP cone domain HCV84_023905 PF13597 Anaerobic ribonucleoside-triphosphate reductase HCV84_023915 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HCV84_023920 PF04221 RelB antitoxin HCV84_023925 PF00874 PRD domain HCV84_023925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_023925 PF08279 HTH domain HCV84_023925 PF05043 Mga helix-turn-helix domain HCV84_023930 PF10282 Lactonase, 7-bladed beta-propeller HCV84_023935 PF07071 KDGP aldolase HCV84_023940 PF03841 L-seryl-tRNA selenium transferase HCV84_023945 PF01979 Amidohydrolase family HCV84_023980 PF07361 Cytochrome b562 HCV84_023985 PF01523 Putative modulator of DNA gyrase HCV84_023990 PF04751 Protein of unknown function (DUF615) HCV84_024010 PF08245 Mur ligase middle domain HCV84_024010 PF01225 Mur ligase family, catalytic domain HCV84_024010 PF02875 Mur ligase family, glutamate ligase domain HCV84_024015 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HCV84_024020 PF02653 Branched-chain amino acid transport system / permease component HCV84_024025 PF02653 Branched-chain amino acid transport system / permease component HCV84_024030 PF00005 ABC transporter HCV84_024035 PF13407 Periplasmic binding protein domain HCV84_024040 PF00719 Inorganic pyrophosphatase HCV84_024050 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HCV84_024055 PF04357 TamB, inner membrane protein subunit of TAM complex HCV84_024060 PF07244 Surface antigen variable number repeat HCV84_024060 PF01103 Surface antigen HCV84_024060 PF17243 POTRA domain TamA domain 1 HCV84_024065 PF01625 Peptide methionine sulfoxide reductase HCV84_024070 PF00571 CBS domain HCV84_024070 PF03471 Transporter associated domain HCV84_024070 PF01595 Cyclin M transmembrane N-terminal domain HCV84_024075 PF01306 LacY proton/sugar symporter HCV84_024080 PF08533 Beta-galactosidase C-terminal domain HCV84_024080 PF08532 Beta-galactosidase trimerisation domain HCV84_024080 PF02449 Beta-galactosidase HCV84_024085 PF12833 Helix-turn-helix domain HCV84_024085 PF02311 AraC-like ligand binding domain HCV84_024090 PF06526 Protein of unknown function (DUF1107) HCV84_024095 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HCV84_024100 PF00459 Inositol monophosphatase family HCV84_024105 PF02872 5'-nucleotidase, C-terminal domain HCV84_024105 PF00149 Calcineurin-like phosphoesterase HCV84_024110 PF01638 HxlR-like helix-turn-helix HCV84_024115 PF05368 NmrA-like family HCV84_024120 PF12833 Helix-turn-helix domain HCV84_024125 PF00892 EamA-like transporter family HCV84_024130 PF01814 Hemerythrin HHE cation binding domain HCV84_024130 PF04405 Domain of Unknown function (DUF542) HCV84_024135 PF00324 Amino acid permease HCV84_024140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV84_024140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HCV84_024145 PF04225 Opacity-associated protein A LysM-like domain HCV84_024145 PF08525 Opacity-associated protein A N-terminal motif HCV84_024150 PF01281 Ribosomal protein L9, N-terminal domain HCV84_024150 PF03948 Ribosomal protein L9, C-terminal domain HCV84_024155 PF01084 Ribosomal protein S18 HCV84_024160 PF00436 Single-strand binding protein family HCV84_024165 PF01250 Ribosomal protein S6 HCV84_024170 PF07338 Protein of unknown function (DUF1471) HCV84_024175 PF07690 Major Facilitator Superfamily HCV84_024180 PF00596 Class II Aldolase and Adducin N-terminal domain HCV84_024185 PF01261 Xylose isomerase-like TIM barrel HCV84_024190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCV84_024195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV84_024200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_024205 PF03611 PTS system sugar-specific permease component HCV84_024215 PF08220 DeoR-like helix-turn-helix domain HCV84_024215 PF00455 DeoR C terminal sensor domain HCV84_024220 PF00326 Prolyl oligopeptidase family HCV84_024225 PF07338 Protein of unknown function (DUF1471) HCV84_024230 PF07338 Protein of unknown function (DUF1471) HCV84_024235 PF02770 Acyl-CoA dehydrogenase, middle domain HCV84_024235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCV84_024235 PF18158 Adaptive response protein AidB N-terminal domain HCV84_024240 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCV84_024240 PF00588 SpoU rRNA Methylase family HCV84_024245 PF08206 Ribonuclease B OB domain HCV84_024245 PF08461 Ribonuclease R winged-helix domain HCV84_024245 PF17876 Cold shock domain HCV84_024245 PF00773 RNB domain HCV84_024245 PF00575 S1 RNA binding domain HCV84_024250 PF02082 Transcriptional regulator HCV84_024255 PF00709 Adenylosuccinate synthetase HCV84_024260 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HCV84_024270 PF01145 SPFH domain / Band 7 family HCV84_024275 PF12221 Bacterial membrane protein N terminal HCV84_024275 PF01145 SPFH domain / Band 7 family HCV84_024280 PF16360 GTP-binding GTPase Middle Region HCV84_024280 PF01926 50S ribosome-binding GTPase HCV84_024280 PF13167 GTP-binding GTPase N-terminal HCV84_024285 PF17209 Hfq protein HCV84_024295 PF08676 MutL C terminal dimerisation domain HCV84_024295 PF01119 DNA mismatch repair protein, C-terminal domain HCV84_024300 PF01520 N-acetylmuramoyl-L-alanine amidase HCV84_024305 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HCV84_024310 PF03853 YjeF-related protein N-terminus HCV84_024310 PF01256 Carbohydrate kinase HCV84_024315 PF08331 Domain of unknown function (DUF1730) HCV84_024335 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV84_024340 PF00929 Exonuclease HCV84_024345 PF03193 RsgA GTPase HCV84_024350 PF02666 Phosphatidylserine decarboxylase HCV84_024355 PF12794 Mechanosensitive ion channel inner membrane domain 1 HCV84_024355 PF12795 Mechanosensitive ion channel porin domain HCV84_024355 PF00924 Mechanosensitive ion channel HCV84_024360 PF13520 Amino acid permease HCV84_024365 PF00152 tRNA synthetases class II (D, K and N) HCV84_024370 PF00890 FAD binding domain HCV84_024370 PF02910 Fumarate reductase flavoprotein C-term HCV84_024375 PF13085 2Fe-2S iron-sulfur cluster binding domain HCV84_024375 PF13183 4Fe-4S dicluster domain HCV84_024380 PF02300 Fumarate reductase subunit C HCV84_024385 PF02313 Fumarate reductase subunit D HCV84_024390 PF08212 Lipocalin-like domain HCV84_024395 PF00893 Small Multidrug Resistance protein HCV84_024400 PF08085 Entericidin EcnA/B family HCV84_024410 PF08207 Elongation factor P (EF-P) KOW-like domain HCV84_024410 PF09285 Elongation factor P, C-terminal HCV84_024410 PF01132 Elongation factor P (EF-P) OB domain HCV84_024415 PF04055 Radical SAM superfamily HCV84_024430 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_024430 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_024435 PF13953 PapC C-terminal domain HCV84_024435 PF13954 PapC N-terminal domain HCV84_024435 PF00577 Outer membrane usher protein HCV84_024450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_024450 PF00529 HlyD membrane-fusion protein of T1SS HCV84_024455 PF03412 Peptidase C39 family HCV84_024455 PF00664 ABC transporter transmembrane region HCV84_024455 PF00005 ABC transporter HCV84_024465 PF13698 Domain of unknown function (DUF4156) HCV84_024470 PF00118 TCP-1/cpn60 chaperonin family HCV84_024475 PF00166 Chaperonin 10 Kd subunit HCV84_024480 PF13520 Amino acid permease HCV84_024485 PF04186 FxsA cytoplasmic membrane protein HCV84_024490 PF10415 Fumarase C C-terminus HCV84_024490 PF00206 Lyase HCV84_024495 PF03605 Anaerobic c4-dicarboxylate membrane transporter HCV84_024500 PF03091 CutA1 divalent ion tolerance protein HCV84_024505 PF11412 Disulphide bond corrector protein DsbC HCV84_024505 PF02683 Cytochrome C biogenesis protein transmembrane region HCV84_024545 PF14883 Hypothetical glycosyl hydrolase family 13 HCV84_024545 PF01522 Polysaccharide deacetylase HCV84_024550 PF00535 Glycosyl transferase family 2 HCV84_024565 PF03741 Integral membrane protein TerC family HCV84_024575 PF00226 DnaJ domain HCV84_024575 PF01556 DnaJ C terminal domain HCV84_024590 PF06406 StbA protein HCV84_024605 PF02056 Family 4 glycosyl hydrolase HCV84_024605 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV84_024610 PF12833 Helix-turn-helix domain HCV84_024615 PF08946 Osmosensory transporter coiled coil HCV84_024615 PF00083 Sugar (and other) transporter HCV84_024620 PF03831 PhnA domain HCV84_024620 PF08274 PhnA Zinc-Ribbon HCV84_024625 PF06983 3-demethylubiquinone-9 3-methyltransferase HCV84_024630 PF07702 UTRA domain HCV84_024630 PF00392 Bacterial regulatory proteins, gntR family HCV84_024635 PF06754 Phosphonate metabolism protein PhnG HCV84_024640 PF05845 Bacterial phosphonate metabolism protein (PhnH) HCV84_024645 PF05861 Bacterial phosphonate metabolism protein (PhnI) HCV84_024650 PF06007 Phosphonate metabolism protein PhnJ HCV84_024655 PF00005 ABC transporter HCV84_024660 PF00005 ABC transporter HCV84_024665 PF07969 Amidohydrolase family HCV84_024675 PF12706 Beta-lactamase superfamily domain HCV84_024685 PF13188 PAS domain HCV84_024685 PF00072 Response regulator receiver domain HCV84_024685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_024685 PF00512 His Kinase A (phospho-acceptor) domain HCV84_024685 PF08448 PAS fold HCV84_024690 PF00005 ABC transporter HCV84_024695 PF02653 Branched-chain amino acid transport system / permease component HCV84_024700 PF13407 Periplasmic binding protein domain HCV84_024720 PF00486 Transcriptional regulatory protein, C terminal HCV84_024720 PF00072 Response regulator receiver domain HCV84_024730 PF08238 Sel1 repeat HCV84_024735 PF00375 Sodium:dicarboxylate symporter family HCV84_024745 PF13193 AMP-binding enzyme C-terminal domain HCV84_024745 PF00501 AMP-binding enzyme HCV84_024745 PF16177 Acetyl-coenzyme A synthetase N-terminus HCV84_024750 PF04341 Protein of unknown function, DUF485 HCV84_024755 PF00474 Sodium:solute symporter family HCV84_024770 PF00577 Outer membrane usher protein HCV84_024770 PF13953 PapC C-terminal domain HCV84_024770 PF13954 PapC N-terminal domain HCV84_024775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV84_024775 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV84_024780 PF00419 Fimbrial protein HCV84_024785 PF04172 LrgB-like family HCV84_024790 PF03788 LrgA family HCV84_024795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_024795 PF03466 LysR substrate binding domain HCV84_024800 PF00999 Sodium/hydrogen exchanger family HCV84_024805 PF00860 Permease family HCV84_024810 PF00043 Glutathione S-transferase, C-terminal domain HCV84_024810 PF02798 Glutathione S-transferase, N-terminal domain HCV84_024815 PF00376 MerR family regulatory protein HCV84_024815 PF09278 MerR, DNA binding HCV84_024820 PF12833 Helix-turn-helix domain HCV84_024825 PF12792 CSS motif domain associated with EAL HCV84_024825 PF00563 EAL domain HCV84_024830 PF15940 Family of unknown function HCV84_024835 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_024850 PF08402 TOBE domain HCV84_024850 PF00005 ABC transporter HCV84_024855 PF00753 Metallo-beta-lactamase superfamily HCV84_024855 PF12706 Beta-lactamase superfamily domain HCV84_024860 PF00356 Bacterial regulatory proteins, lacI family HCV84_024865 PF00459 Inositol monophosphatase family HCV84_024875 PF01103 Surface antigen HCV84_024875 PF07244 Surface antigen variable number repeat HCV84_024885 PF07519 Tannase and feruloyl esterase HCV84_024890 PF12833 Helix-turn-helix domain HCV84_024895 PF07715 TonB-dependent Receptor Plug Domain HCV84_024895 PF00593 TonB dependent receptor HCV84_024900 PF01464 Transglycosylase SLT domain HCV84_024905 PF00436 Single-strand binding protein family HCV84_024910 PF17755 UvrA DNA-binding domain HCV84_024910 PF17760 UvrA interaction domain HCV84_024910 PF00005 ABC transporter HCV84_024915 PF04237 YjbR HCV84_024920 PF01894 Uncharacterised protein family UPF0047 HCV84_024925 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HCV84_024930 PF00155 Aminotransferase class I and II HCV84_024935 PF00842 Alanine racemase, C-terminal domain HCV84_024935 PF01168 Alanine racemase, N-terminal domain HCV84_024940 PF03796 DnaB-like helicase C terminal domain HCV84_024940 PF00772 DnaB-like helicase N terminal domain HCV84_024945 PF00107 Zinc-binding dehydrogenase HCV84_024945 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_024950 PF09583 Phage shock protein G (Phageshock_PspG) HCV84_024955 PF01207 Dihydrouridine synthase (Dus) HCV84_024965 PF01475 Ferric uptake regulator family HCV84_024970 PF05532 CsbD-like HCV84_024980 PF01554 MatE HCV84_024985 PF01726 LexA DNA binding domain HCV84_024985 PF00717 Peptidase S24-like HCV84_024990 PF01219 Prokaryotic diacylglycerol kinase HCV84_024995 PF01553 Acyltransferase HCV84_025000 PF01040 UbiA prenyltransferase family HCV84_025005 PF04345 Chorismate lyase HCV84_025010 PF07148 Maltose operon periplasmic protein precursor (MalM) HCV84_025015 PF02264 LamB porin HCV84_025020 PF17912 MalK OB fold domain HCV84_025020 PF00005 ABC transporter HCV84_025025 PF01547 Bacterial extracellular solute-binding protein HCV84_025030 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_025030 PF14785 Maltose transport system permease protein MalF P2 domain HCV84_025035 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_025040 PF06146 Phosphate-starvation-inducible E HCV84_025045 PF03313 Serine dehydratase alpha chain HCV84_025060 PF01042 Endoribonuclease L-PSP HCV84_025070 PF12804 MobA-like NTP transferase domain HCV84_025070 PF14602 Hexapeptide repeat of succinyl-transferase HCV84_025070 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_025075 PF00342 Phosphoglucose isomerase HCV84_025080 PF00696 Amino acid kinase family HCV84_025080 PF01842 ACT domain HCV84_025085 PF01758 Sodium Bile acid symporter family HCV84_025090 PF11656 YjbD family (DUF3811) HCV84_025095 PF01479 S4 domain HCV84_025095 PF00849 RNA pseudouridylate synthase HCV84_025100 PF03575 Peptidase family S51 HCV84_025105 PF02690 Na+/Pi-cotransporter HCV84_025110 PF02965 Vitamin B12 dependent methionine synthase, activation domain HCV84_025110 PF02574 Homocysteine S-methyltransferase HCV84_025110 PF02607 B12 binding domain HCV84_025110 PF02310 B12 binding domain HCV84_025110 PF00809 Pterin binding enzyme HCV84_025115 PF09339 IclR helix-turn-helix domain HCV84_025115 PF01614 Bacterial transcriptional regulator HCV84_025120 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HCV84_025125 PF00463 Isocitrate lyase family HCV84_025130 PF01274 Malate synthase HCV84_025135 PF04204 Homoserine O-succinyltransferase HCV84_025140 PF13673 Acetyltransferase (GNAT) domain HCV84_025165 PF01808 AICARFT/IMPCHase bienzyme HCV84_025165 PF02142 MGS-like domain HCV84_025170 PF02844 Phosphoribosylglycinamide synthetase, N domain HCV84_025170 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HCV84_025170 PF02843 Phosphoribosylglycinamide synthetase, C domain HCV84_025175 PF02954 Bacterial regulatory protein, Fis family HCV84_025175 PF00158 Sigma-54 interaction domain HCV84_025175 PF00072 Response regulator receiver domain HCV84_025180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_025180 PF00512 His Kinase A (phospho-acceptor) domain HCV84_025185 PF13801 Heavy-metal resistance HCV84_025190 PF07356 Protein of unknown function (DUF1481) HCV84_025195 PF00216 Bacterial DNA-binding protein HCV84_025200 PF04222 Protein of unknown function (DUF416) HCV84_025205 PF04493 Endonuclease V HCV84_025210 PF01208 Uroporphyrinogen decarboxylase (URO-D) HCV84_025215 PF00293 NUDIX domain HCV84_025215 PF09297 NADH pyrophosphatase zinc ribbon domain HCV84_025220 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HCV84_025225 PF13667 ThiC-associated domain HCV84_025225 PF01964 Radical SAM ThiC family HCV84_025230 PF02581 Thiamine monophosphate synthase HCV84_025235 PF00899 ThiF family HCV84_025240 PF02597 ThiS family HCV84_025245 PF05690 Thiazole biosynthesis protein ThiG HCV84_025250 PF04055 Radical SAM superfamily HCV84_025250 PF06968 Biotin and Thiamin Synthesis associated domain HCV84_025255 PF00990 Diguanylate cyclase, GGDEF domain HCV84_025260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV84_025265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV84_025270 PF03605 Anaerobic c4-dicarboxylate membrane transporter HCV84_025275 PF05000 RNA polymerase Rpb1, domain 4 HCV84_025275 PF00623 RNA polymerase Rpb1, domain 2 HCV84_025275 PF04983 RNA polymerase Rpb1, domain 3 HCV84_025275 PF04997 RNA polymerase Rpb1, domain 1 HCV84_025275 PF04998 RNA polymerase Rpb1, domain 5 HCV84_025280 PF04561 RNA polymerase Rpb2, domain 2 HCV84_025280 PF04563 RNA polymerase beta subunit HCV84_025280 PF00562 RNA polymerase Rpb2, domain 6 HCV84_025280 PF04560 RNA polymerase Rpb2, domain 7 HCV84_025280 PF10385 RNA polymerase beta subunit external 1 domain HCV84_025280 PF04565 RNA polymerase Rpb2, domain 3 HCV84_025285 PF16320 Ribosomal protein L7/L12 dimerisation domain HCV84_025285 PF00542 Ribosomal protein L7/L12 C-terminal domain HCV84_025290 PF00466 Ribosomal protein L10 HCV84_025295 PF00687 Ribosomal protein L1p/L10e family HCV84_025300 PF00298 Ribosomal protein L11, RNA binding domain HCV84_025300 PF03946 Ribosomal protein L11, N-terminal domain HCV84_025305 PF00467 KOW motif HCV84_025305 PF02357 Transcription termination factor nusG HCV84_025310 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HCV84_025315 PF03143 Elongation factor Tu C-terminal domain HCV84_025315 PF03144 Elongation factor Tu domain 2 HCV84_025315 PF00009 Elongation factor Tu GTP binding domain HCV84_025340 PF00485 Phosphoribulokinase / Uridine kinase family HCV84_025345 PF02237 Biotin protein ligase C terminal domain HCV84_025345 PF03099 Biotin/lipoate A/B protein ligase family HCV84_025345 PF08279 HTH domain HCV84_025350 PF01565 FAD binding domain HCV84_025350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HCV84_025380 PF12724 Flavodoxin domain HCV84_025385 PF02386 Cation transport protein HCV84_025390 PF09186 Domain of unknown function (DUF1949) HCV84_025390 PF01205 Uncharacterized protein family UPF0029 HCV84_025395 PF00557 Metallopeptidase family M24 HCV84_025400 PF00378 Enoyl-CoA hydratase/isomerase HCV84_025400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV84_025400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV84_025405 PF00108 Thiolase, N-terminal domain HCV84_025405 PF02803 Thiolase, C-terminal domain HCV84_025410 PF00970 Oxidoreductase FAD-binding domain HCV84_025410 PF00175 Oxidoreductase NAD-binding domain HCV84_025415 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCV84_025420 PF02357 Transcription termination factor nusG HCV84_025425 PF01026 TatD related DNase HCV84_025430 PF00902 Sec-independent protein translocase protein (TatC) HCV84_025440 PF02416 mttA/Hcf106 family HCV84_025445 PF03109 ABC1 family HCV84_025450 PF02036 SCP-2 sterol transfer family HCV84_025455 PF01209 ubiE/COQ5 methyltransferase family HCV84_025460 PF02646 RmuC family HCV84_025465 PF01048 Phosphorylase superfamily HCV84_025470 PF01738 Dienelactone hydrolase family HCV84_025475 PF01717 Cobalamin-independent synthase, Catalytic domain HCV84_025475 PF08267 Cobalamin-independent synthase, N-terminal domain HCV84_025480 PF03466 LysR substrate binding domain HCV84_025480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_025485 PF00892 EamA-like transporter family HCV84_025495 PF12146 Serine aminopeptidase, S33 HCV84_025500 PF01810 LysE type translocator HCV84_025505 PF04754 Putative transposase, YhgA-like HCV84_025510 PF01810 LysE type translocator HCV84_025515 PF00270 DEAD/DEAH box helicase HCV84_025515 PF00271 Helicase conserved C-terminal domain HCV84_025515 PF00570 HRDC domain HCV84_025515 PF16124 RecQ zinc-binding HCV84_025515 PF09382 RQC domain HCV84_025520 PF02253 Phospholipase A1 HCV84_025525 PF03061 Thioesterase superfamily HCV84_025530 PF00892 EamA-like transporter family HCV84_025535 PF01544 CorA-like Mg2+ transporter protein HCV84_025540 PF13361 UvrD-like helicase C-terminal domain HCV84_025540 PF00580 UvrD/REP helicase N-terminal domain HCV84_025545 PF13419 Haloacid dehalogenase-like hydrolase HCV84_025550 PF00589 Phage integrase family HCV84_025550 PF02899 Phage integrase, N-terminal SAM-like domain HCV84_025555 PF04340 Protein of unknown function, DUF484 HCV84_025560 PF01678 Diaminopimelate epimerase HCV84_025565 PF13627 Prokaryotic lipoprotein-attachment site HCV84_025570 PF01491 Frataxin-like domain HCV84_025575 PF01295 Adenylate cyclase, class-I HCV84_025575 PF12633 Adenylate cyclase NT domain HCV84_025580 PF03900 Porphobilinogen deaminase, C-terminal domain HCV84_025580 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HCV84_025585 PF02602 Uroporphyrinogen-III synthase HemD HCV84_025590 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HCV84_025595 PF07219 HemY protein N-terminus HCV84_025595 PF07719 Tetratricopeptide repeat HCV84_025620 PF00324 Amino acid permease HCV84_025625 PF03808 Glycosyl transferase WecB/TagA/CpsF family HCV84_025630 PF06899 WzyE protein, O-antigen assembly polymerase HCV84_025635 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 HCV84_025640 PF01943 Polysaccharide biosynthesis protein HCV84_025645 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCV84_025655 PF00483 Nucleotidyl transferase HCV84_025660 PF16363 GDP-mannose 4,6 dehydratase HCV84_025665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCV84_025665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCV84_025665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCV84_025670 PF02350 UDP-N-acetylglucosamine 2-epimerase HCV84_025675 PF02706 Chain length determinant protein HCV84_025680 PF00953 Glycosyl transferase family 4 HCV84_025685 PF07498 Rho termination factor, N-terminal domain HCV84_025685 PF07497 Rho termination factor, RNA-binding domain HCV84_025685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCV84_025690 PF00085 Thioredoxin HCV84_025695 PF00270 DEAD/DEAH box helicase HCV84_025695 PF00271 Helicase conserved C-terminal domain HCV84_025700 PF02541 Ppx/GppA phosphatase family HCV84_025705 PF03466 LysR substrate binding domain HCV84_025705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_025715 PF04474 Protein of unknown function (DUF554) HCV84_025720 PF00580 UvrD/REP helicase N-terminal domain HCV84_025720 PF13361 UvrD-like helicase C-terminal domain HCV84_025735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HCV84_025735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HCV84_025740 PF03466 LysR substrate binding domain HCV84_025740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_025745 PF00291 Pyridoxal-phosphate dependent enzyme HCV84_025745 PF00585 C-terminal regulatory domain of Threonine dehydratase HCV84_025750 PF00920 Dehydratase family HCV84_025755 PF01063 Amino-transferase class IV HCV84_025765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV84_025765 PF00205 Thiamine pyrophosphate enzyme, central domain HCV84_025765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV84_025770 PF08046 IlvGEDA operon leader peptide HCV84_025775 PF01078 Magnesium chelatase, subunit ChlI HCV84_025775 PF13335 Magnesium chelatase, subunit ChlI C-terminal HCV84_025780 PF04219 Protein of unknown function, DUF HCV84_025785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_025785 PF03466 LysR substrate binding domain HCV84_025825 PF01177 Asp/Glu/Hydantoin racemase HCV84_025830 PF00593 TonB dependent receptor HCV84_025830 PF07715 TonB-dependent Receptor Plug Domain HCV84_025835 PF05958 tRNA (Uracil-5-)-methyltransferase HCV84_025840 PF07226 Protein of unknown function (DUF1422) HCV84_025845 PF00440 Bacterial regulatory proteins, tetR family HCV84_025850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV84_025850 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV84_025855 PF03466 LysR substrate binding domain HCV84_025855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_025860 PF00206 Lyase HCV84_025860 PF14698 Argininosuccinate lyase C-terminal HCV84_025865 PF00696 Amino acid kinase family HCV84_025870 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV84_025870 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV84_025875 PF01546 Peptidase family M20/M25/M40 HCV84_025875 PF07687 Peptidase dimerisation domain HCV84_025880 PF00311 Phosphoenolpyruvate carboxylase HCV84_025885 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HCV84_025890 PF12833 Helix-turn-helix domain HCV84_025895 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCV84_025900 PF00465 Iron-containing alcohol dehydrogenase HCV84_025905 PF00892 EamA-like transporter family HCV84_025910 PF02219 Methylenetetrahydrofolate reductase HCV84_025915 PF03466 LysR substrate binding domain HCV84_025915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_025920 PF02627 Carboxymuconolactone decarboxylase family HCV84_025925 PF02872 5'-nucleotidase, C-terminal domain HCV84_025925 PF00149 Calcineurin-like phosphoesterase HCV84_025935 PF03447 Homoserine dehydrogenase, NAD binding domain HCV84_025935 PF00742 Homoserine dehydrogenase HCV84_025935 PF00696 Amino acid kinase family HCV84_025940 PF01053 Cys/Met metabolism PLP-dependent enzyme HCV84_025945 PF01340 Met Apo-repressor, MetJ HCV84_025950 PF01197 Ribosomal protein L31 HCV84_025955 PF18074 Primosomal protein N C-terminal domain HCV84_025955 PF00271 Helicase conserved C-terminal domain HCV84_025955 PF00270 DEAD/DEAH box helicase HCV84_025955 PF17764 3′ DNA-binding domain (3′BD) HCV84_025955 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HCV84_025960 PF00356 Bacterial regulatory proteins, lacI family HCV84_025965 PF05036 Sporulation related domain HCV84_025970 PF00227 Proteasome subunit HCV84_025975 PF07724 AAA domain (Cdc48 subfamily) HCV84_025975 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_025975 PF10431 C-terminal, D2-small domain, of ClpB protein HCV84_025980 PF01040 UbiA prenyltransferase family HCV84_025985 PF03737 Aldolase/RraA HCV84_025990 PF00365 Phosphofructokinase HCV84_025995 PF16916 Dimerisation domain of Zinc Transporter HCV84_025995 PF01545 Cation efflux family HCV84_026000 PF07813 LTXXQ motif family protein HCV84_026005 PF00072 Response regulator receiver domain HCV84_026005 PF00486 Transcriptional regulatory protein, C terminal HCV84_026010 PF00672 HAMP domain HCV84_026010 PF16527 Two-component sensor protein CpxA, periplasmic domain HCV84_026010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_026010 PF00512 His Kinase A (phospho-acceptor) domain HCV84_026015 PF03475 3-alpha domain HCV84_026015 PF03473 MOSC domain HCV84_026020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCV84_026020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCV84_026025 PF06379 L-rhamnose-proton symport protein (RhaT) HCV84_026030 PF02311 AraC-like ligand binding domain HCV84_026030 PF12833 Helix-turn-helix domain HCV84_026035 PF02311 AraC-like ligand binding domain HCV84_026035 PF12833 Helix-turn-helix domain HCV84_026040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV84_026040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV84_026045 PF06134 L-rhamnose isomerase (RhaA) HCV84_026050 PF00596 Class II Aldolase and Adducin N-terminal domain HCV84_026055 PF13407 Periplasmic binding protein domain HCV84_026060 PF00005 ABC transporter HCV84_026065 PF02653 Branched-chain amino acid transport system / permease component HCV84_026070 PF02653 Branched-chain amino acid transport system / permease component HCV84_026075 PF00465 Iron-containing alcohol dehydrogenase HCV84_026080 PF05336 L-rhamnose mutarotase HCV84_026085 PF01306 LacY proton/sugar symporter HCV84_026090 PF16875 Glycosyl hydrolase family 36 N-terminal domain HCV84_026090 PF16874 Glycosyl hydrolase family 36 C-terminal domain HCV84_026095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV84_026095 PF00356 Bacterial regulatory proteins, lacI family HCV84_026120 PF02634 FdhD/NarQ family HCV84_026130 PF09163 Formate dehydrogenase N, transmembrane HCV84_026130 PF13247 4Fe-4S dicluster domain HCV84_026135 PF01292 Prokaryotic cytochrome b561 HCV84_026140 PF04216 Protein involved in formate dehydrogenase formation HCV84_026155 PF07859 alpha/beta hydrolase fold HCV84_026160 PF00583 Acetyltransferase (GNAT) family HCV84_026160 PF09500 Putative thioesterase (yiiD_Cterm) HCV84_026165 PF02580 D-Tyr-tRNA(Tyr) deacylase HCV84_026170 PF03631 Virulence factor BrkB HCV84_026175 PF13419 Haloacid dehalogenase-like hydrolase HCV84_026180 PF00679 Elongation factor G C-terminus HCV84_026180 PF00009 Elongation factor Tu GTP binding domain HCV84_026180 PF03144 Elongation factor Tu domain 2 HCV84_026185 PF00120 Glutamine synthetase, catalytic domain HCV84_026185 PF03951 Glutamine synthetase, beta-Grasp domain HCV84_026190 PF00989 PAS fold HCV84_026190 PF00512 His Kinase A (phospho-acceptor) domain HCV84_026190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_026195 PF02954 Bacterial regulatory protein, Fis family HCV84_026195 PF00072 Response regulator receiver domain HCV84_026195 PF00158 Sigma-54 interaction domain HCV84_026205 PF04055 Radical SAM superfamily HCV84_026205 PF06969 HemN C-terminal domain HCV84_026210 PF04220 Der GTPase activator (YihI) HCV84_026215 PF01926 50S ribosome-binding GTPase HCV84_026220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCV84_026220 PF01612 3'-5' exonuclease HCV84_026220 PF00476 DNA polymerase family A HCV84_026220 PF01367 5'-3' exonuclease, C-terminal SAM fold HCV84_026225 PF01553 Acyltransferase HCV84_026230 PF01323 DSBA-like thioredoxin domain HCV84_026235 PF01636 Phosphotransferase enzyme family HCV84_026240 PF06288 Protein of unknown function (DUF1040) HCV84_026245 PF12804 MobA-like NTP transferase domain HCV84_026250 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HCV84_026275 PF07729 FCD domain HCV84_026275 PF00392 Bacterial regulatory proteins, gntR family HCV84_026280 PF07690 Major Facilitator Superfamily HCV84_026285 PF00356 Bacterial regulatory proteins, lacI family HCV84_026290 PF00294 pfkB family carbohydrate kinase HCV84_026295 PF13407 Periplasmic binding protein domain HCV84_026300 PF02653 Branched-chain amino acid transport system / permease component HCV84_026305 PF00005 ABC transporter HCV84_026310 PF05025 RbsD / FucU transport protein family HCV84_026315 PF02705 K+ potassium transporter HCV84_026320 PF07728 AAA domain (dynein-related subfamily) HCV84_026320 PF12592 Protein of unknown function (DUF3763) HCV84_026320 PF17868 AAA lid domain HCV84_026325 PF05762 VWA domain containing CoxE-like protein HCV84_026330 PF03590 Aspartate-ammonia ligase HCV84_026335 PF01037 Lrp/AsnC ligand binding domain HCV84_026340 PF00258 Flavodoxin HCV84_026345 PF01134 Glucose inhibited division protein A HCV84_026345 PF13932 GidA associated domain HCV84_026350 PF02527 rRNA small subunit methyltransferase G HCV84_026355 PF03899 ATP synthase I chain HCV84_026360 PF00119 ATP synthase A chain HCV84_026365 PF00137 ATP synthase subunit C HCV84_026370 PF00430 ATP synthase B/B' CF(0) HCV84_026375 PF00213 ATP synthase delta (OSCP) subunit HCV84_026380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCV84_026380 PF00306 ATP synthase alpha/beta chain, C terminal domain HCV84_026380 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCV84_026385 PF00231 ATP synthase HCV84_026390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCV84_026390 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCV84_026395 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HCV84_026395 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HCV84_026400 PF00132 Bacterial transferase hexapeptide (six repeats) HCV84_026400 PF12804 MobA-like NTP transferase domain HCV84_026405 PF01380 SIS domain HCV84_026410 PF12849 PBP superfamily domain HCV84_026415 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_026420 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_026425 PF00005 ABC transporter HCV84_026430 PF01895 PhoU domain HCV84_026435 PF02264 LamB porin HCV84_026435 PF11471 Maltoporin periplasmic N-terminal extension HCV84_026440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV84_026440 PF00756 Putative esterase HCV84_026445 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCV84_026450 PF13419 Haloacid dehalogenase-like hydrolase HCV84_026455 PF00860 Permease family HCV84_026460 PF03358 NADPH-dependent FMN reductase HCV84_026470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_026470 PF03466 LysR substrate binding domain HCV84_026475 PF07690 Major Facilitator Superfamily HCV84_026485 PF10396 GTP-binding protein TrmE N-terminus HCV84_026485 PF01926 50S ribosome-binding GTPase HCV84_026485 PF12631 MnmE helical domain HCV84_026490 PF14849 YidC periplasmic domain HCV84_026490 PF02096 60Kd inner membrane protein HCV84_026495 PF01809 Putative membrane protein insertion efficiency factor HCV84_026500 PF00825 Ribonuclease P HCV84_026505 PF00468 Ribosomal protein L34 HCV84_026510 PF01051 Initiator Replication protein HCV84_026515 PF00589 Phage integrase family HCV84_026520 PF13185 GAF domain HCV84_026520 PF00990 Diguanylate cyclase, GGDEF domain HCV84_026525 PF00990 Diguanylate cyclase, GGDEF domain HCV84_026525 PF00498 FHA domain HCV84_026525 PF00563 EAL domain HCV84_026530 PF13737 Transposase DDE domain HCV84_026540 PF00563 EAL domain HCV84_026540 PF12792 CSS motif domain associated with EAL HCV84_026545 PF10011 Predicted membrane protein (DUF2254) HCV84_026550 PF02028 BCCT, betaine/carnitine/choline family transporter HCV84_026580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_026580 PF00672 HAMP domain HCV84_026580 PF00512 His Kinase A (phospho-acceptor) domain HCV84_026585 PF00486 Transcriptional regulatory protein, C terminal HCV84_026585 PF00072 Response regulator receiver domain HCV84_026590 PF02321 Outer membrane efflux protein HCV84_026595 PF11604 Copper binding periplasmic protein CusF HCV84_026600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV84_026605 PF00873 AcrB/AcrD/AcrF family HCV84_026615 PF04945 YHS domain HCV84_026625 PF01551 Peptidase family M23 HCV84_026625 PF08525 Opacity-associated protein A N-terminal motif HCV84_026625 PF01476 LysM domain HCV84_026635 PF07731 Multicopper oxidase HCV84_026635 PF00394 Multicopper oxidase HCV84_026635 PF07732 Multicopper oxidase HCV84_026640 PF05275 Copper resistance protein B precursor (CopB) HCV84_026645 PF04234 CopC domain HCV84_026650 PF05425 Copper resistance protein D HCV84_026655 PF00072 Response regulator receiver domain HCV84_026655 PF00486 Transcriptional regulatory protein, C terminal HCV84_026660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV84_026660 PF00672 HAMP domain HCV84_026660 PF00512 His Kinase A (phospho-acceptor) domain HCV84_026680 PF00230 Major intrinsic protein HCV84_026695 PF03358 NADPH-dependent FMN reductase HCV84_026720 PF03960 ArsC family HCV84_026725 PF02040 Arsenical pump membrane protein HCV84_026730 PF02374 Anion-transporting ATPase HCV84_026735 PF06953 Arsenical resistance operon trans-acting repressor ArsD HCV84_026740 PF01022 Bacterial regulatory protein, arsR family HCV84_026765 PF05321 Haemolysin expression modulating protein HCV84_026800 PF01435 Peptidase family M48 HCV84_026815 PF17871 AAA lid domain HCV84_026815 PF10431 C-terminal, D2-small domain, of ClpB protein HCV84_026815 PF00004 ATPase family associated with various cellular activities (AAA) HCV84_026815 PF02861 Clp amino terminal domain, pathogenicity island component HCV84_026815 PF07724 AAA domain (Cdc48 subfamily) HCV84_026820 PF00011 Hsp20/alpha crystallin family HCV84_026825 PF12728 Helix-turn-helix domain HCV84_026850 PF01609 Transposase DDE domain HCV84_026850 PF05598 Transposase domain (DUF772) HCV84_026860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV84_026860 PF03466 LysR substrate binding domain HCV84_026865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV84_026865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV84_026870 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_026880 PF00005 ABC transporter HCV84_026890 PF13610 DDE domain HCV84_026895 PF00005 ABC transporter HCV84_026895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV84_026900 PF03069 Acetamidase/Formamidase family HCV84_026905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV84_026910 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_026915 PF00528 Binding-protein-dependent transport system inner membrane component HCV84_026915 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV84_026940 PF04542 Sigma-70 region 2 HCV84_026940 PF08281 Sigma-70, region 4 HCV84_026945 PF04773 FecR protein HCV84_026945 PF16220 Domain of unknown function (DUF4880) HCV84_026950 PF07660 Secretin and TonB N terminus short domain HCV84_026950 PF00593 TonB dependent receptor HCV84_026950 PF07715 TonB-dependent Receptor Plug Domain HCV84_026955 PF01497 Periplasmic binding protein HCV84_026960 PF01032 FecCD transport family HCV84_026965 PF01032 FecCD transport family HCV84_026970 PF00005 ABC transporter HCV84_026975 PF05717 IS66 Orf2 like protein HCV84_026990 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_026990 PF00107 Zinc-binding dehydrogenase HCV84_026995 PF00356 Bacterial regulatory proteins, lacI family HCV84_027000 PF00703 Glycosyl hydrolases family 2 HCV84_027000 PF02929 Beta galactosidase small chain HCV84_027000 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HCV84_027000 PF02837 Glycosyl hydrolases family 2, sugar binding domain HCV84_027000 PF16353 Domain of unknown function(DUF4981) HCV84_027005 PF01306 LacY proton/sugar symporter HCV84_027040 PF13276 HTH-like domain HCV84_027040 PF00665 Integrase core domain HCV84_027040 PF13333 Integrase core domain HCV84_027050 PF13592 Winged helix-turn helix HCV84_027050 PF13358 DDE superfamily endonuclease HCV84_027060 PF01548 Transposase HCV84_027060 PF02371 Transposase IS116/IS110/IS902 family HCV84_027065 PF04411 PD-(D/E)XK nuclease superfamily HCV84_027075 PF13737 Transposase DDE domain HCV84_027095 PF00176 SNF2 family N-terminal domain HCV84_027095 PF00271 Helicase conserved C-terminal domain HCV84_027095 PF12419 SNF2 Helicase protein HCV84_027125 PF03358 NADPH-dependent FMN reductase HCV84_027130 PF03960 ArsC family HCV84_027135 PF02040 Arsenical pump membrane protein HCV84_027140 PF01022 Bacterial regulatory protein, arsR family HCV84_027145 PF01740 STAS domain HCV84_027145 PF00916 Sulfate permease family HCV84_027150 PF00582 Universal stress protein family HCV84_027160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HCV84_027165 PF06965 Na+/H+ antiporter 1 HCV84_027170 PF00893 Small Multidrug Resistance protein HCV84_027175 PF00239 Resolvase, N terminal domain HCV84_027175 PF02796 Helix-turn-helix domain of resolvase HCV84_027185 PF00239 Resolvase, N terminal domain HCV84_027185 PF02796 Helix-turn-helix domain of resolvase HCV84_027225 PF13700 Domain of unknown function (DUF4158) HCV84_027225 PF01526 Tn3 transposase DDE domain HCV84_027230 PF00239 Resolvase, N terminal domain HCV84_027230 PF02796 Helix-turn-helix domain of resolvase HCV84_027235 PF01636 Phosphotransferase enzyme family HCV84_027240 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HCV84_027245 PF00589 Phage integrase family HCV84_027245 PF13495 Phage integrase, N-terminal SAM-like domain HCV84_027250 PF00809 Pterin binding enzyme HCV84_027270 PF13610 DDE domain HCV84_027275 PF01464 Transglycosylase SLT domain HCV84_027285 PF06067 Domain of unknown function (DUF932) HCV84_027290 PF01381 Helix-turn-helix HCV84_027330 PF01848 Hok/gef family HCV84_027350 PF06290 Plasmid SOS inhibition protein (PsiB) HCV84_027355 PF02195 ParB-like nuclease domain HCV84_027360 PF06006 Bacterial protein of unknown function (DUF905) HCV84_027365 PF00436 Single-strand binding protein family HCV84_027380 PF03230 Antirestriction protein HCV84_027390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HCV84_027395 PF00717 Peptidase S24-like HCV84_027430 PF18090 Centromere-binding protein HTH domain HCV84_027430 PF02195 ParB-like nuclease domain HCV84_027435 PF13614 AAA domain HCV84_027470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCV84_027470 PF01367 5'-3' exonuclease, C-terminal SAM fold HCV84_027500 PF14579 Helix-hairpin-helix motif HCV84_027500 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCV84_027500 PF02811 PHP domain HCV84_027500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCV84_027510 PF06213 Cobalamin biosynthesis protein CobT HCV84_027510 PF11775 Cobalamin biosynthesis protein CobT VWA domain HCV84_027535 PF00462 Glutaredoxin HCV84_027545 PF02562 PhoH-like protein HCV84_027775 PF00005 ABC transporter HCV84_027775 PF09383 NIL domain HCV84_027780 PF02195 ParB-like nuclease domain HCV84_027780 PF17762 HTH domain found in ParB protein HCV84_027785 PF17762 HTH domain found in ParB protein HCV84_027785 PF02195 ParB-like nuclease domain HCV84_027790 PF17191 RecG wedge domain HCV84_027790 PF00270 DEAD/DEAH box helicase HCV84_027790 PF00271 Helicase conserved C-terminal domain HCV84_027900 PF13099 Domain of unknown function (DUF3944) HCV84_027900 PF03981 Ubiquinol-cytochrome C chaperone HCV84_027935 PF01121 Dephospho-CoA kinase HCV84_027940 PF00186 Dihydrofolate reductase HCV84_027950 PF00303 Thymidylate synthase HCV84_027960 PF00268 Ribonucleotide reductase, small chain HCV84_027965 PF02867 Ribonucleotide reductase, barrel domain HCV84_027965 PF00317 Ribonucleotide reductase, all-alpha domain HCV84_027965 PF03477 ATP cone domain HCV84_027995 PF13592 Winged helix-turn helix HCV84_027995 PF13358 DDE superfamily endonuclease HCV84_028015 PF02387 IncFII RepA protein family HCV84_028035 PF14319 Transposase zinc-binding domain HCV84_028035 PF04986 Putative transposase HCV84_028055 PF02583 Metal-sensitive transcriptional repressor HCV84_028060 PF00107 Zinc-binding dehydrogenase HCV84_028060 PF08240 Alcohol dehydrogenase GroES-like domain HCV84_028070 PF00756 Putative esterase HCV84_028075 PF00239 Resolvase, N terminal domain HCV84_028075 PF02796 Helix-turn-helix domain of resolvase HCV84_028080 PF13700 Domain of unknown function (DUF4158) HCV84_028080 PF01526 Tn3 transposase DDE domain HCV84_028085 PF01548 Transposase HCV84_028085 PF02371 Transposase IS116/IS110/IS902 family HCV84_028100 PF04754 Putative transposase, YhgA-like HCV84_028110 PF02796 Helix-turn-helix domain of resolvase HCV84_028110 PF00239 Resolvase, N terminal domain HCV84_028125 PF11799 impB/mucB/samB family C-terminal domain HCV84_028125 PF00817 impB/mucB/samB family HCV84_028125 PF13438 Domain of unknown function (DUF4113) HCV84_028130 PF00717 Peptidase S24-like HCV84_028135 PF06183 DinI-like family HCV84_028150 PF01555 DNA methylase HCV84_028170 PF03230 Antirestriction protein HCV84_028190 PF00436 Single-strand binding protein family HCV84_028195 PF06006 Bacterial protein of unknown function (DUF905) HCV84_028200 PF02195 ParB-like nuclease domain HCV84_028205 PF06290 Plasmid SOS inhibition protein (PsiB) HCV84_028210 PF06952 PsiA protein HCV84_028255 PF03230 Antirestriction protein HCV84_028260 PF01464 Transglycosylase SLT domain HCV84_028265 PF05261 TraM protein, DNA-binding HCV84_028275 PF05509 TraY domain HCV84_028280 PF05513 TraA HCV84_028285 PF07178 TraL protein HCV84_028290 PF05309 TraE protein HCV84_028295 PF06586 TraK protein HCV84_028300 PF03743 Bacterial conjugation TrbI-like protein HCV84_028305 PF09676 Type IV conjugative transfer system lipoprotein (TraV) HCV84_028340 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer HCV84_028345 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) HCV84_028350 PF12477 Sex factor F TraW protein N terminal HCV84_028360 PF06834 TraU protein HCV84_028365 PF09673 Type-F conjugative transfer system pilin assembly protein HCV84_028370 PF06986 Type-1V conjugative transfer system mating pair stabilisation HCV84_028375 PF11100 Conjugal transfer protein TrbE HCV84_028390 PF13728 F plasmid transfer operon protein HCV84_028395 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) HCV84_028400 PF13728 F plasmid transfer operon protein HCV84_028410 PF06122 Conjugative relaxosome accessory transposon protein HCV84_028415 PF07916 TraG-like protein, N-terminal region HCV84_028425 PF05818 Enterobacterial TraT complement resistance protein HCV84_028440 PF18272 single-stranded DNA binding TraI N-terminal subdomain HCV84_028440 PF18340 DNA relaxase TraI 2B/2B-like domain HCV84_028440 PF08751 TrwC relaxase HCV84_028440 PF07057 DNA helicase TraI HCV84_028445 PF05857 TraX protein HCV84_028450 PF12602 Fertility inhibition protein N terminal HCV84_028450 PF04352 ProQ/FINO family HCV84_028490 PF02387 IncFII RepA protein family HCV84_028505 PF04754 Putative transposase, YhgA-like HCV84_028510 PF02796 Helix-turn-helix domain of resolvase HCV84_028510 PF00239 Resolvase, N terminal domain HCV84_028520 PF10609 NUBPL iron-transfer P-loop NTPase HCV84_028535 PF11799 impB/mucB/samB family C-terminal domain HCV84_028535 PF13438 Domain of unknown function (DUF4113) HCV84_028535 PF00817 impB/mucB/samB family HCV84_028540 PF00717 Peptidase S24-like HCV84_028545 PF06183 DinI-like family HCV84_028555 PF06924 Protein of unknown function (DUF1281) HCV84_028555 PF18406 Ferredoxin-like domain in Api92-like protein HCV84_028575 PF01555 DNA methylase HCV84_028585 PF07128 Protein of unknown function (DUF1380) HCV84_028595 PF03230 Antirestriction protein HCV84_028610 PF06440 DNA polymerase III, theta subunit HCV84_028620 PF00436 Single-strand binding protein family HCV84_028625 PF06006 Bacterial protein of unknown function (DUF905) HCV84_028630 PF02195 ParB-like nuclease domain HCV84_028635 PF06290 Plasmid SOS inhibition protein (PsiB) HCV84_028640 PF06952 PsiA protein HCV84_028685 PF03230 Antirestriction protein HCV84_028690 PF01464 Transglycosylase SLT domain HCV84_028695 PF05261 TraM protein, DNA-binding HCV84_028705 PF05509 TraY domain HCV84_028710 PF05513 TraA HCV84_028715 PF07178 TraL protein HCV84_028720 PF05309 TraE protein HCV84_028725 PF06586 TraK protein HCV84_028730 PF03743 Bacterial conjugation TrbI-like protein HCV84_028740 PF09676 Type IV conjugative transfer system lipoprotein (TraV) HCV84_028780 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer HCV84_028785 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) HCV84_028790 PF12477 Sex factor F TraW protein N terminal HCV84_028795 PF06834 TraU protein HCV84_028800 PF09673 Type-F conjugative transfer system pilin assembly protein HCV84_028805 PF06986 Type-1V conjugative transfer system mating pair stabilisation HCV84_028825 PF13728 F plasmid transfer operon protein HCV84_028830 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) HCV84_028835 PF13728 F plasmid transfer operon protein HCV84_028840 PF06122 Conjugative relaxosome accessory transposon protein HCV84_028845 PF07916 TraG-like protein, N-terminal region HCV84_028855 PF12615 F sex factor protein N terminal HCV84_028855 PF10412 Type IV secretion-system coupling protein DNA-binding domain HCV84_028860 PF18340 DNA relaxase TraI 2B/2B-like domain HCV84_028860 PF08751 TrwC relaxase HCV84_028860 PF18272 single-stranded DNA binding TraI N-terminal subdomain HCV84_028860 PF07057 DNA helicase TraI HCV84_028865 PF05857 TraX protein HCV84_028870 PF04352 ProQ/FINO family HCV84_028870 PF12602 Fertility inhibition protein N terminal HCV84_028905 PF10723 Replication regulatory protein RepB HCV84_028910 PF02796 Helix-turn-helix domain of resolvase HCV84_028910 PF00665 Integrase core domain HCV84_028915 PF01695 IstB-like ATP binding protein HCV84_028945 PF02387 IncFII RepA protein family HCV84_028955 PF00436 Single-strand binding protein family HCV84_028965 PF01464 Transglycosylase SLT domain HCV84_029055 PF03230 Antirestriction protein HCV84_029065 PF00565 Staphylococcal nuclease homologue HCV84_029090 PF00589 Phage integrase family HCV84_029115 PF02796 Helix-turn-helix domain of resolvase HCV84_029115 PF00239 Resolvase, N terminal domain HCV84_029125 PF02899 Phage integrase, N-terminal SAM-like domain HCV84_029125 PF00589 Phage integrase family HCV84_029135 PF02402 Lysis protein HCV84_029140 PF03513 Cloacin immunity protein HCV84_029145 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 HCV84_029145 PF03515 Colicin-like bacteriocin tRNase domain HCV84_029145 PF09000 Cytotoxic HCV84_029170 PF01815 Rop protein