locus-tag class description HCV85_000005 PF00308 Bacterial dnaA protein HCV85_000005 PF11638 DnaA N-terminal domain HCV85_000005 PF08299 Bacterial dnaA protein helix-turn-helix HCV85_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain HCV85_000010 PF02767 DNA polymerase III beta subunit, central domain HCV85_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain HCV85_000015 PF02463 RecF/RecN/SMC N terminal domain HCV85_000020 PF00204 DNA gyrase B HCV85_000020 PF00986 DNA gyrase B subunit, carboxyl terminus HCV85_000020 PF01751 Toprim domain HCV85_000020 PF18053 DNA gyrase B subunit insert domain HCV85_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_000040 PF00392 Bacterial regulatory proteins, gntR family HCV85_000040 PF07729 FCD domain HCV85_000045 PF05035 2-keto-3-deoxy-galactonokinase HCV85_000050 PF01081 KDPG and KHG aldolase HCV85_000055 PF13378 Enolase C-terminal domain-like HCV85_000055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV85_000060 PF07690 Major Facilitator Superfamily HCV85_000065 PF07676 WD40-like Beta Propeller Repeat HCV85_000065 PF12566 Protein of unknown function (DUF3748) HCV85_000070 PF07119 Protein of unknown function (DUF1375) HCV85_000075 PF00011 Hsp20/alpha crystallin family HCV85_000080 PF00011 Hsp20/alpha crystallin family HCV85_000090 PF06826 Predicted Permease Membrane Region HCV85_000090 PF02080 TrkA-C domain HCV85_000095 PF07702 UTRA domain HCV85_000095 PF00392 Bacterial regulatory proteins, gntR family HCV85_000100 PF00367 phosphotransferase system, EIIB HCV85_000100 PF02378 Phosphotransferase system, EIIC HCV85_000105 PF02056 Family 4 glycosyl hydrolase HCV85_000105 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV85_000110 PF02656 Domain of unknown function (DUF202) HCV85_000115 PF02656 Domain of unknown function (DUF202) HCV85_000125 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_000130 PF02447 GntP family permease HCV85_000140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_000140 PF03466 LysR substrate binding domain HCV85_000145 PF07690 Major Facilitator Superfamily HCV85_000175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_000175 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_000175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_000180 PF01842 ACT domain HCV85_000185 PF00196 Bacterial regulatory proteins, luxR family HCV85_000185 PF00072 Response regulator receiver domain HCV85_000190 PF05231 MASE1 HCV85_000190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_000190 PF07730 Histidine kinase HCV85_000195 PF07690 Major Facilitator Superfamily HCV85_000200 PF07690 Major Facilitator Superfamily HCV85_000205 PF06711 Protein of unknown function (DUF1198) HCV85_000220 PF07690 Major Facilitator Superfamily HCV85_000230 PF00266 Aminotransferase class-V HCV85_000235 PF07702 UTRA domain HCV85_000235 PF00392 Bacterial regulatory proteins, gntR family HCV85_000240 PF01547 Bacterial extracellular solute-binding protein HCV85_000245 PF08402 TOBE domain HCV85_000245 PF00005 ABC transporter HCV85_000250 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_000260 PF02264 LamB porin HCV85_000265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV85_000270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_000270 PF02378 Phosphotransferase system, EIIC HCV85_000275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_000280 PF00356 Bacterial regulatory proteins, lacI family HCV85_000285 PF07690 Major Facilitator Superfamily HCV85_000290 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HCV85_000290 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit HCV85_000295 PF03466 LysR substrate binding domain HCV85_000295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_000300 PF02585 GlcNAc-PI de-N-acetylase HCV85_000305 PF03737 Aldolase/RraA HCV85_000310 PF04303 PrpF protein HCV85_000325 PF00892 EamA-like transporter family HCV85_000330 PF02378 Phosphotransferase system, EIIC HCV85_000330 PF00367 phosphotransferase system, EIIB HCV85_000335 PF13580 SIS domain HCV85_000340 PF07690 Major Facilitator Superfamily HCV85_000345 PF02321 Outer membrane efflux protein HCV85_000350 PF00873 AcrB/AcrD/AcrF family HCV85_000355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_000355 PF00529 HlyD membrane-fusion protein of T1SS HCV85_000370 PF00583 Acetyltransferase (GNAT) family HCV85_000375 PF00440 Bacterial regulatory proteins, tetR family HCV85_000380 PF07690 Major Facilitator Superfamily HCV85_000385 PF03466 LysR substrate binding domain HCV85_000385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_000405 PF12833 Helix-turn-helix domain HCV85_000410 PF03180 NLPA lipoprotein HCV85_000420 PF00293 NUDIX domain HCV85_000425 PF12706 Beta-lactamase superfamily domain HCV85_000430 PF01965 DJ-1/PfpI family HCV85_000435 PF00107 Zinc-binding dehydrogenase HCV85_000435 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_000450 PF00107 Zinc-binding dehydrogenase HCV85_000450 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_000470 PF01055 Glycosyl hydrolases family 31 HCV85_000470 PF13802 Galactose mutarotase-like HCV85_000480 PF02056 Family 4 glycosyl hydrolase HCV85_000480 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV85_000485 PF00367 phosphotransferase system, EIIB HCV85_000485 PF02378 Phosphotransferase system, EIIC HCV85_000490 PF05170 AsmA family HCV85_000495 PF00860 Permease family HCV85_000500 PF03616 Sodium/glutamate symporter HCV85_000505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_000505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_000510 PF00230 Major intrinsic protein HCV85_000515 PF06005 Cell division protein ZapB HCV85_000525 PF02611 CDP-diacylglycerol pyrophosphatase HCV85_000535 PF00121 Triosephosphate isomerase HCV85_000540 PF07305 Protein of unknown function (DUF1454) HCV85_000545 PF05656 Protein of unknown function (DUF805) HCV85_000550 PF00970 Oxidoreductase FAD-binding domain HCV85_000550 PF00175 Oxidoreductase NAD-binding domain HCV85_000555 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HCV85_000560 PF00271 Helicase conserved C-terminal domain HCV85_000560 PF00270 DEAD/DEAH box helicase HCV85_000560 PF17191 RecG wedge domain HCV85_000565 PF12105 SpoU, rRNA methylase, C-terminal HCV85_000565 PF00588 SpoU rRNA Methylase family HCV85_000570 PF13291 ACT domain HCV85_000570 PF04607 Region found in RelA / SpoT proteins HCV85_000570 PF02824 TGS domain HCV85_000575 PF01192 RNA polymerase Rpb6 HCV85_000580 PF00625 Guanylate kinase HCV85_000585 PF03120 NAD-dependent DNA ligase OB-fold domain HCV85_000585 PF01653 NAD-dependent DNA ligase adenylation domain HCV85_000590 PF03458 UPF0126 domain HCV85_000600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCV85_000600 PF12833 Helix-turn-helix domain HCV85_000600 PF02805 Metal binding domain of Ada HCV85_000600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV85_000610 PF03755 YicC-like family, N-terminal region HCV85_000610 PF08340 Domain of unknown function (DUF1732) HCV85_000615 PF05598 Transposase domain (DUF772) HCV85_000615 PF01609 Transposase DDE domain HCV85_000635 PF00005 ABC transporter HCV85_000645 PF03725 3' exoribonuclease family, domain 2 HCV85_000645 PF01138 3' exoribonuclease family, domain 1 HCV85_000650 PF00156 Phosphoribosyl transferase domain HCV85_000655 PF00440 Bacterial regulatory proteins, tetR family HCV85_000660 PF00692 dUTPase HCV85_000665 PF04127 DNA / pantothenate metabolism flavoprotein HCV85_000665 PF02441 Flavoprotein HCV85_000670 PF04002 RadC-like JAB domain HCV85_000675 PF00830 Ribosomal L28 family HCV85_000680 PF00471 Ribosomal protein L33 HCV85_000685 PF06827 Zinc finger found in FPG and IleRS HCV85_000685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HCV85_000685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HCV85_000690 PF01467 Cytidylyltransferase-like HCV85_000695 PF00535 Glycosyl transferase family 2 HCV85_000700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HCV85_000705 PF00535 Glycosyl transferase family 2 HCV85_000710 PF13439 Glycosyltransferase Family 4 HCV85_000710 PF00534 Glycosyl transferases group 1 HCV85_000715 PF13439 Glycosyltransferase Family 4 HCV85_000715 PF00534 Glycosyl transferases group 1 HCV85_000720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV85_000735 PF04932 O-Antigen ligase HCV85_000745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV85_000750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV85_000755 PF01370 NAD dependent epimerase/dehydratase family HCV85_000760 PF00155 Aminotransferase class I and II HCV85_000765 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_000765 PF00107 Zinc-binding dehydrogenase HCV85_000770 PF00535 Glycosyl transferase family 2 HCV85_000775 PF04748 Divergent polysaccharide deacetylase HCV85_000780 PF01551 Peptidase family M23 HCV85_000785 PF01676 Metalloenzyme superfamily HCV85_000785 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HCV85_000790 PF00581 Rhodanese-like domain HCV85_000795 PF00462 Glutaredoxin HCV85_000800 PF02556 Preprotein translocase subunit SecB HCV85_000805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HCV85_000805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HCV85_000810 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_000810 PF06426 Serine acetyltransferase, N-terminal HCV85_000815 PF00588 SpoU rRNA Methylase family HCV85_000820 PF01070 FMN-dependent dehydrogenase HCV85_000825 PF00392 Bacterial regulatory proteins, gntR family HCV85_000825 PF07729 FCD domain HCV85_000830 PF02652 L-lactate permease HCV85_000835 PF10928 Protein of unknown function (DUF2810) HCV85_000845 PF05068 Mannitol repressor HCV85_000850 PF08125 Mannitol dehydrogenase C-terminal domain HCV85_000850 PF01232 Mannitol dehydrogenase Rossmann domain HCV85_000855 PF02378 Phosphotransferase system, EIIC HCV85_000855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_000855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_000860 PF11742 Protein of unknown function (DUF3302) HCV85_000865 PF00529 HlyD membrane-fusion protein of T1SS HCV85_000865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_000870 PF13417 Glutathione S-transferase, N-terminal domain HCV85_000870 PF00043 Glutathione S-transferase, C-terminal domain HCV85_000875 PF03841 L-seryl-tRNA selenium transferase HCV85_000875 PF12390 Selenocysteine synthase N terminal HCV85_000880 PF09106 Elongation factor SelB, winged helix HCV85_000880 PF09107 Elongation factor SelB, winged helix HCV85_000880 PF03144 Elongation factor Tu domain 2 HCV85_000880 PF00009 Elongation factor Tu GTP binding domain HCV85_000885 PF01614 Bacterial transcriptional regulator HCV85_000885 PF09339 IclR helix-turn-helix domain HCV85_000890 PF12800 4Fe-4S binding domain HCV85_000890 PF13247 4Fe-4S dicluster domain HCV85_000895 PF00155 Aminotransferase class I and II HCV85_000900 PF00128 Alpha amylase, catalytic domain HCV85_000905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HCV85_000910 PF12833 Helix-turn-helix domain HCV85_000915 PF02653 Branched-chain amino acid transport system / permease component HCV85_000920 PF00005 ABC transporter HCV85_000925 PF13407 Periplasmic binding protein domain HCV85_000935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_000935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_000940 PF05360 yiaA/B two helix domain HCV85_000945 PF05360 yiaA/B two helix domain HCV85_000950 PF01757 Acyltransferase family HCV85_000955 PF13983 YsaB-like lipoprotein HCV85_000960 PF02091 Glycyl-tRNA synthetase alpha subunit HCV85_000965 PF05746 DALR anticodon binding domain HCV85_000965 PF02092 Glycyl-tRNA synthetase beta subunit HCV85_000975 PF01848 Hok/gef family HCV85_000980 PF12848 ABC transporter HCV85_000980 PF00005 ABC transporter HCV85_000985 PF00313 'Cold-shock' DNA-binding domain HCV85_000990 PF01381 Helix-turn-helix HCV85_000995 PF07690 Major Facilitator Superfamily HCV85_001000 PF11254 Protein of unknown function (DUF3053) HCV85_001005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_001005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV85_001010 PF07690 Major Facilitator Superfamily HCV85_001015 PF00294 pfkB family carbohydrate kinase HCV85_001025 PF00356 Bacterial regulatory proteins, lacI family HCV85_001030 PF00691 OmpA family HCV85_001030 PF13488 Glycine zipper HCV85_001035 PF00384 Molybdopterin oxidoreductase HCV85_001035 PF18364 Molybdopterin oxidoreductase N-terminal domain HCV85_001035 PF01568 Molydopterin dinucleotide binding domain HCV85_001040 PF00583 Acetyltransferase (GNAT) family HCV85_001045 PF03352 Methyladenine glycosylase HCV85_001050 PF03797 Autotransporter beta-domain HCV85_001055 PF07690 Major Facilitator Superfamily HCV85_001060 PF08019 Phosphoethanolamine transferase EptA/EptB HCV85_001060 PF00884 Sulfatase HCV85_001080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_001085 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_001090 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_001090 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_001095 PF00005 ABC transporter HCV85_001095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_001100 PF00005 ABC transporter HCV85_001100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_001120 PF03170 Bacterial cellulose synthase subunit HCV85_001120 PF07238 PilZ domain HCV85_001120 PF00535 Glycosyl transferase family 2 HCV85_001120 PF03552 Cellulose synthase HCV85_001125 PF03170 Bacterial cellulose synthase subunit HCV85_001130 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HCV85_001140 PF01270 Glycosyl hydrolases family 8 HCV85_001145 PF11658 Cellulose biosynthesis protein BcsG HCV85_001150 PF11120 Cellulose biosynthesis protein BcsF HCV85_001155 PF10995 Cellulose biosynthesis GIL HCV85_001160 PF10945 Cellulose biosynthesis protein BcsR HCV85_001165 PF06564 Cellulose biosynthesis protein BcsQ HCV85_001170 PF07238 PilZ domain HCV85_001170 PF00535 Glycosyl transferase family 2 HCV85_001175 PF03170 Bacterial cellulose synthase subunit HCV85_001180 PF01270 Glycosyl hydrolases family 8 HCV85_001185 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HCV85_001190 PF00563 EAL domain HCV85_001190 PF17154 Gammaproteobacterial periplasmic sensor domain HCV85_001190 PF00672 HAMP domain HCV85_001190 PF00990 Diguanylate cyclase, GGDEF domain HCV85_001195 PF00375 Sodium:dicarboxylate symporter family HCV85_001200 PF05193 Peptidase M16 inactive domain HCV85_001200 PF00675 Insulinase (Peptidase family M16) HCV85_001205 PF00294 pfkB family carbohydrate kinase HCV85_001210 PF05170 AsmA family HCV85_001215 PF07690 Major Facilitator Superfamily HCV85_001215 PF00083 Sugar (and other) transporter HCV85_001220 PF03631 Virulence factor BrkB HCV85_001225 PF03466 LysR substrate binding domain HCV85_001225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_001235 PF13302 Acetyltransferase (GNAT) domain HCV85_001240 PF01204 Trehalase HCV85_001245 PF00465 Iron-containing alcohol dehydrogenase HCV85_001255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV85_001255 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_001260 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HCV85_001265 PF01569 PAP2 superfamily HCV85_001270 PF01432 Peptidase family M3 HCV85_001275 PF04445 Putative SAM-dependent methyltransferase HCV85_001280 PF00854 POT family HCV85_001285 PF00582 Universal stress protein family HCV85_001290 PF10625 Universal stress protein B (UspB) HCV85_001295 PF01384 Phosphate transporter family HCV85_001305 PF00571 CBS domain HCV85_001305 PF01769 Divalent cation transporter HCV85_001305 PF03448 MgtE intracellular N domain HCV85_001310 PF01402 Ribbon-helix-helix protein, copG family HCV85_001310 PF08753 NikR C terminal nickel binding domain HCV85_001315 PF00005 ABC transporter HCV85_001320 PF00005 ABC transporter HCV85_001325 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_001330 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_001335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_001340 PF03466 LysR substrate binding domain HCV85_001340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_001345 PF05870 Phenolic acid decarboxylase (PAD) HCV85_001350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCV85_001355 PF00535 Glycosyl transferase family 2 HCV85_001360 PF02911 Formyl transferase, C-terminal domain HCV85_001360 PF00551 Formyl transferase HCV85_001360 PF01370 NAD dependent epimerase/dehydratase family HCV85_001365 PF01522 Polysaccharide deacetylase HCV85_001370 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HCV85_001375 PF00892 EamA-like transporter family HCV85_001385 PF01594 AI-2E family transporter HCV85_001390 PF07690 Major Facilitator Superfamily HCV85_001395 PF08786 DcrB HCV85_001400 PF02592 Putative vitamin uptake transporter HCV85_001405 PF01206 Sulfurtransferase TusA HCV85_001410 PF00403 Heavy-metal-associated domain HCV85_001415 PF07947 YhhN family HCV85_001420 PF10694 Protein of unknown function (DUF2500) HCV85_001425 PF06611 Protein of unknown function (DUF1145) HCV85_001435 PF02881 SRP54-type protein, helical bundle domain HCV85_001435 PF00448 SRP54-type protein, GTPase domain HCV85_001440 PF00005 ABC transporter HCV85_001445 PF02687 FtsX-like permease family HCV85_001445 PF18075 FtsX extracellular domain HCV85_001450 PF04545 Sigma-70, region 4 HCV85_001450 PF04542 Sigma-70 region 2 HCV85_001455 PF00155 Aminotransferase class I and II HCV85_001455 PF00392 Bacterial regulatory proteins, gntR family HCV85_001460 PF00202 Aminotransferase class-III HCV85_001470 PF13458 Periplasmic binding protein HCV85_001475 PF12568 Acetyltransferase (GNAT) domain, PanZ HCV85_001480 PF13458 Periplasmic binding protein HCV85_001485 PF02653 Branched-chain amino acid transport system / permease component HCV85_001490 PF11862 Domain of unknown function (DUF3382) HCV85_001490 PF02653 Branched-chain amino acid transport system / permease component HCV85_001495 PF00005 ABC transporter HCV85_001495 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV85_001500 PF00005 ABC transporter HCV85_001505 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HCV85_001515 PF13416 Bacterial extracellular solute-binding protein HCV85_001520 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_001525 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_001530 PF00005 ABC transporter HCV85_001530 PF17912 MalK OB fold domain HCV85_001535 PF03009 Glycerophosphoryl diester phosphodiesterase family HCV85_001540 PF10956 Protein of unknown function (DUF2756) HCV85_001550 PF00583 Acetyltransferase (GNAT) family HCV85_001560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_001560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_001565 PF17954 Quercetinase C-terminal cupin domain HCV85_001565 PF02678 Pirin HCV85_001570 PF00356 Bacterial regulatory proteins, lacI family HCV85_001570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV85_001575 PF01202 Shikimate kinase HCV85_001580 PF02447 GntP family permease HCV85_001590 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV85_001590 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV85_001595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV85_001595 PF00128 Alpha amylase, catalytic domain HCV85_001595 PF02806 Alpha amylase, C-terminal all-beta domain HCV85_001600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV85_001600 PF18390 Glycogen debranching enzyme C-terminal domain HCV85_001600 PF00128 Alpha amylase, catalytic domain HCV85_001605 PF00483 Nucleotidyl transferase HCV85_001610 PF08323 Starch synthase catalytic domain HCV85_001610 PF00534 Glycosyl transferases group 1 HCV85_001615 PF00343 Carbohydrate phosphorylase HCV85_001630 PF01266 FAD dependent oxidoreductase HCV85_001630 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HCV85_001635 PF00581 Rhodanese-like domain HCV85_001640 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HCV85_001640 PF01694 Rhomboid family HCV85_001645 PF08220 DeoR-like helix-turn-helix domain HCV85_001645 PF00455 DeoR C terminal sensor domain HCV85_001650 PF00196 Bacterial regulatory proteins, luxR family HCV85_001650 PF17874 MalT-like TPR region HCV85_001655 PF00343 Carbohydrate phosphorylase HCV85_001660 PF02446 4-alpha-glucanotransferase HCV85_001665 PF02447 GntP family permease HCV85_001670 PF01521 Iron-sulphur cluster biosynthesis HCV85_001670 PF01106 NifU-like domain HCV85_001675 PF00156 Phosphoribosyl transferase domain HCV85_001680 PF00561 alpha/beta hydrolase fold HCV85_001690 PF09012 FeoC like transcriptional regulator HCV85_001695 PF07664 Ferrous iron transport protein B C terminus HCV85_001695 PF17910 FeoB cytosolic helical domain HCV85_001695 PF02421 Ferrous iron transport protein B HCV85_001695 PF07670 Nucleoside recognition HCV85_001700 PF04023 FeoA domain HCV85_001705 PF16921 Tex protein YqgF-like domain HCV85_001705 PF17674 HHH domain HCV85_001705 PF09371 Tex-like protein N-terminal domain HCV85_001705 PF00575 S1 RNA binding domain HCV85_001710 PF01272 Transcription elongation factor, GreA/GreB, C-term HCV85_001710 PF03449 Transcription elongation factor, N-terminal HCV85_001715 PF00072 Response regulator receiver domain HCV85_001715 PF00486 Transcriptional regulatory protein, C terminal HCV85_001720 PF00672 HAMP domain HCV85_001720 PF00512 His Kinase A (phospho-acceptor) domain HCV85_001720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_001725 PF01293 Phosphoenolpyruvate carboxykinase HCV85_001730 PF01430 Hsp33 protein HCV85_001735 PF01479 S4 domain HCV85_001740 PF13419 Haloacid dehalogenase-like hydrolase HCV85_001745 PF07095 Intracellular growth attenuator protein IgaA HCV85_001750 PF00293 NUDIX domain HCV85_001755 PF00905 Penicillin binding protein transpeptidase domain HCV85_001755 PF00912 Transglycosylase HCV85_001755 PF17092 Penicillin-binding protein OB-like domain HCV85_001780 PF03958 Bacterial type II/III secretion system short domain HCV85_001780 PF00263 Bacterial type II and III secretion system protein HCV85_001785 PF01202 Shikimate kinase HCV85_001790 PF01761 3-dehydroquinate synthase HCV85_001795 PF05036 Sporulation related domain HCV85_001800 PF02086 D12 class N6 adenine-specific DNA methyltransferase HCV85_001805 PF00834 Ribulose-phosphate 3 epimerase family HCV85_001810 PF13419 Haloacid dehalogenase-like hydrolase HCV85_001815 PF00579 tRNA synthetases class I (W and Y) HCV85_001820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV85_001820 PF14824 Sirohaem biosynthesis protein central HCV85_001820 PF10414 Sirohaem synthase dimerisation region HCV85_001825 PF13806 Rieske-like [2Fe-2S] domain HCV85_001830 PF04324 BFD-like [2Fe-2S] binding domain HCV85_001830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCV85_001830 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCV85_001830 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_001830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCV85_001835 PF07969 Amidohydrolase family HCV85_001840 PF07690 Major Facilitator Superfamily HCV85_001845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HCV85_001850 PF10832 Protein of unknown function (DUF2559) HCV85_001855 PF02661 Fic/DOC family HCV85_001860 PF00117 Glutamine amidotransferase class-I HCV85_001865 PF00202 Aminotransferase class-III HCV85_001870 PF12805 FUSC-like inner membrane protein yccS HCV85_001875 PF00027 Cyclic nucleotide-binding domain HCV85_001875 PF13545 Crp-like helix-turn-helix domain HCV85_001880 PF02566 OsmC-like protein HCV85_001885 PF00485 Phosphoribulokinase / Uridine kinase family HCV85_001890 PF06794 Uncharacterised protein family (UPF0270) HCV85_001895 PF00561 alpha/beta hydrolase fold HCV85_001900 PF12848 ABC transporter HCV85_001900 PF00005 ABC transporter HCV85_001905 PF02525 Flavodoxin-like fold HCV85_001910 PF02254 TrkA-N domain HCV85_001910 PF00999 Sodium/hydrogen exchanger family HCV85_001915 PF09526 Probable metal-binding protein (DUF2387) HCV85_001920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV85_001925 PF04102 SlyX HCV85_001930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HCV85_001930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV85_001935 PF13309 HTH domain HCV85_001935 PF08348 YheO-like PAS domain HCV85_001940 PF02635 DsrE/DsrF-like family HCV85_001945 PF02635 DsrE/DsrF-like family HCV85_001950 PF04077 DsrH like protein HCV85_001955 PF00164 Ribosomal protein S12/S23 HCV85_001960 PF00177 Ribosomal protein S7p/S5e HCV85_001965 PF03764 Elongation factor G, domain IV HCV85_001965 PF00009 Elongation factor Tu GTP binding domain HCV85_001965 PF03144 Elongation factor Tu domain 2 HCV85_001965 PF00679 Elongation factor G C-terminus HCV85_001965 PF14492 Elongation Factor G, domain II HCV85_001970 PF03144 Elongation factor Tu domain 2 HCV85_001970 PF03143 Elongation factor Tu C-terminal domain HCV85_001970 PF00009 Elongation factor Tu GTP binding domain HCV85_001975 PF04324 BFD-like [2Fe-2S] binding domain HCV85_001980 PF00210 Ferritin-like domain HCV85_001985 PF01478 Type IV leader peptidase family HCV85_001990 PF00338 Ribosomal protein S10p/S20e HCV85_001995 PF00297 Ribosomal protein L3 HCV85_002000 PF00573 Ribosomal protein L4/L1 family HCV85_002005 PF00276 Ribosomal protein L23 HCV85_002010 PF00181 Ribosomal Proteins L2, RNA binding domain HCV85_002010 PF03947 Ribosomal Proteins L2, C-terminal domain HCV85_002015 PF00203 Ribosomal protein S19 HCV85_002020 PF00237 Ribosomal protein L22p/L17e HCV85_002025 PF07650 KH domain HCV85_002025 PF00189 Ribosomal protein S3, C-terminal domain HCV85_002030 PF00252 Ribosomal protein L16p/L10e HCV85_002035 PF00831 Ribosomal L29 protein HCV85_002040 PF00366 Ribosomal protein S17 HCV85_002045 PF00238 Ribosomal protein L14p/L23e HCV85_002050 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HCV85_002050 PF00467 KOW motif HCV85_002055 PF00673 ribosomal L5P family C-terminus HCV85_002055 PF00281 Ribosomal protein L5 HCV85_002060 PF00253 Ribosomal protein S14p/S29e HCV85_002065 PF00410 Ribosomal protein S8 HCV85_002070 PF00347 Ribosomal protein L6 HCV85_002075 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HCV85_002080 PF00333 Ribosomal protein S5, N-terminal domain HCV85_002080 PF03719 Ribosomal protein S5, C-terminal domain HCV85_002085 PF00327 Ribosomal protein L30p/L7e HCV85_002090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HCV85_002095 PF00344 SecY translocase HCV85_002100 PF00444 Ribosomal protein L36 HCV85_002105 PF00416 Ribosomal protein S13/S18 HCV85_002110 PF00411 Ribosomal protein S11 HCV85_002115 PF01479 S4 domain HCV85_002115 PF00163 Ribosomal protein S4/S9 N-terminal domain HCV85_002120 PF01000 RNA polymerase Rpb3/RpoA insert domain HCV85_002120 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HCV85_002120 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HCV85_002125 PF01196 Ribosomal protein L17 HCV85_002130 PF09350 Domain of unknown function (DUF1992) HCV85_002135 PF13411 MerR HTH family regulatory protein HCV85_002140 PF03889 Alternative ribosome-rescue factor A HCV85_002145 PF01741 Large-conductance mechanosensitive channel, MscL HCV85_002150 PF02080 TrkA-C domain HCV85_002150 PF02254 TrkA-N domain HCV85_002155 PF01189 16S rRNA methyltransferase RsmB/F HCV85_002155 PF01029 NusB family HCV85_002160 PF02911 Formyl transferase, C-terminal domain HCV85_002160 PF00551 Formyl transferase HCV85_002165 PF01327 Polypeptide deformylase HCV85_002170 PF02481 DNA recombination-mediator protein A HCV85_002170 PF17782 DprA winged helix domain HCV85_002175 PF04361 Protein of unknown function (DUF494) HCV85_002180 PF01396 Topoisomerase DNA binding C4 zinc finger HCV85_002185 PF01300 Telomere recombination HCV85_002190 PF08501 Shikimate dehydrogenase substrate binding domain HCV85_002190 PF01488 Shikimate / quinate 5-dehydrogenase HCV85_002190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV85_002195 PF07369 Protein of unknown function (DUF1488) HCV85_002200 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_002235 PF00873 AcrB/AcrD/AcrF family HCV85_002240 PF00529 HlyD membrane-fusion protein of T1SS HCV85_002240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_002245 PF08361 MAATS-type transcriptional repressor, C-terminal region HCV85_002245 PF00440 Bacterial regulatory proteins, tetR family HCV85_002250 PF00589 Phage integrase family HCV85_002250 PF13356 Arm DNA-binding domain HCV85_002250 PF14659 Phage integrase, N-terminal SAM-like domain HCV85_002265 PF08346 AntA/AntB antirepressor HCV85_002265 PF10548 P22AR C-terminal domain HCV85_002355 PF03354 Phage Terminase HCV85_002365 PF02954 Bacterial regulatory protein, Fis family HCV85_002370 PF01207 Dihydrouridine synthase (Dus) HCV85_002380 PF00474 Sodium:solute symporter family HCV85_002385 PF06196 Protein of unknown function (DUF997) HCV85_002390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCV85_002390 PF00289 Biotin carboxylase, N-terminal domain HCV85_002390 PF02785 Biotin carboxylase C-terminal domain HCV85_002395 PF00364 Biotin-requiring enzyme HCV85_002400 PF01220 Dehydroquinase class II HCV85_002405 PF01794 Ferric reductase like transmembrane component HCV85_002410 PF00174 Oxidoreductase molybdopterin binding domain HCV85_002420 PF00990 Diguanylate cyclase, GGDEF domain HCV85_002420 PF17157 Gammaproteobacterial periplasmic sensor domain HCV85_002420 PF00563 EAL domain HCV85_002430 PF04085 rod shape-determining protein MreC HCV85_002435 PF04093 rod shape-determining protein MreD HCV85_002440 PF02545 Maf-like protein HCV85_002445 PF00575 S1 RNA binding domain HCV85_002445 PF10150 Ribonuclease E/G family HCV85_002450 PF13502 AsmA-like C-terminal region HCV85_002450 PF13116 Protein of unknown function HCV85_002455 PF01523 Putative modulator of DNA gyrase HCV85_002460 PF03466 LysR substrate binding domain HCV85_002460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_002465 PF07869 Protein of unknown function (DUF1656) HCV85_002470 PF13533 Biotin-lipoyl like HCV85_002475 PF04632 Fusaric acid resistance protein family HCV85_002480 PF01337 Barstar (barnase inhibitor) HCV85_002485 PF07338 Protein of unknown function (DUF1471) HCV85_002490 PF07338 Protein of unknown function (DUF1471) HCV85_002495 PF02863 Arginine repressor, C-terminal domain HCV85_002495 PF01316 Arginine repressor, DNA binding domain HCV85_002500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCV85_002500 PF00056 lactate/malate dehydrogenase, NAD binding domain HCV85_002505 PF13180 PDZ domain HCV85_002510 PF00595 PDZ domain HCV85_002510 PF13180 PDZ domain HCV85_002515 PF06295 Protein of unknown function (DUF1043) HCV85_002520 PF03969 AFG1-like ATPase HCV85_002525 PF00572 Ribosomal protein L13 HCV85_002530 PF00380 Ribosomal protein S9/S16 HCV85_002540 PF02798 Glutathione S-transferase, N-terminal domain HCV85_002540 PF00043 Glutathione S-transferase, C-terminal domain HCV85_002545 PF04386 Stringent starvation protein B HCV85_002550 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HCV85_002555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HCV85_002555 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_002560 PF01493 GXGXG motif HCV85_002560 PF00310 Glutamine amidotransferases class-II HCV85_002560 PF04898 Glutamate synthase central domain HCV85_002560 PF01645 Conserved region in glutamate synthase HCV85_002565 PF04055 Radical SAM superfamily HCV85_002565 PF16199 Radical_SAM C-terminal domain HCV85_002570 PF07690 Major Facilitator Superfamily HCV85_002575 PF00107 Zinc-binding dehydrogenase HCV85_002575 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_002580 PF03786 D-mannonate dehydratase (UxuA) HCV85_002585 PF00072 Response regulator receiver domain HCV85_002585 PF00512 His Kinase A (phospho-acceptor) domain HCV85_002585 PF00989 PAS fold HCV85_002585 PF01627 Hpt domain HCV85_002585 PF18415 Histidine kinase receptor ArcB trans-membrane domain HCV85_002585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_002595 PF00912 Transglycosylase HCV85_002600 PF00381 PTS HPr component phosphorylation site HCV85_002605 PF03668 P-loop ATPase protein family HCV85_002610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_002615 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HCV85_002620 PF04963 Sigma-54 factor, core binding domain HCV85_002620 PF00309 Sigma-54 factor, Activator interacting domain (AID) HCV85_002620 PF04552 Sigma-54, DNA binding domain HCV85_002625 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV85_002625 PF00005 ABC transporter HCV85_002630 PF03968 OstA-like protein HCV85_002635 PF06835 Lipopolysaccharide-assembly, LptC-related HCV85_002645 PF01380 SIS domain HCV85_002645 PF00571 CBS domain HCV85_002650 PF01699 Sodium/calcium exchanger protein HCV85_002655 PF00005 ABC transporter HCV85_002660 PF02405 Permease MlaE HCV85_002665 PF02470 MlaD protein HCV85_002670 PF05494 MlaC protein HCV85_002675 PF13466 STAS domain HCV85_002680 PF01722 BolA-like protein HCV85_002685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCV85_002690 PF13693 Winged helix-turn-helix DNA-binding HCV85_002695 PF00348 Polyprenyl synthetase HCV85_002700 PF00829 Ribosomal prokaryotic L21 protein HCV85_002705 PF01016 Ribosomal L27 protein HCV85_002710 PF00892 EamA-like transporter family HCV85_002715 PF01926 50S ribosome-binding GTPase HCV85_002715 PF01018 GTP1/OBG HCV85_002720 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HCV85_002725 PF01272 Transcription elongation factor, GreA/GreB, C-term HCV85_002725 PF03449 Transcription elongation factor, N-terminal HCV85_002730 PF01985 CRS1 / YhbY (CRM) domain HCV85_002735 PF01728 FtsJ-like methyltransferase HCV85_002740 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_002740 PF17862 AAA+ lid domain HCV85_002740 PF06480 FtsH Extracellular HCV85_002740 PF01434 Peptidase family M41 HCV85_002745 PF00809 Pterin binding enzyme HCV85_002750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCV85_002750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCV85_002750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCV85_002750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCV85_002755 PF03840 Preprotein translocase SecG subunit HCV85_002770 PF07437 YfaZ precursor HCV85_002775 PF15977 Winged helix-turn-helix DNA binding HCV85_002780 PF00764 Arginosuccinate synthase HCV85_002790 PF17384 RimP C-terminal SH3 domain HCV85_002790 PF02576 RimP N-terminal domain HCV85_002795 PF00575 S1 RNA binding domain HCV85_002795 PF13184 NusA-like KH domain HCV85_002795 PF08529 NusA N-terminal domain HCV85_002800 PF04760 Translation initiation factor IF-2, N-terminal region HCV85_002800 PF00009 Elongation factor Tu GTP binding domain HCV85_002800 PF11987 Translation-initiation factor 2 HCV85_002800 PF08364 Bacterial translation initiation factor IF-2 associated region HCV85_002805 PF02033 Ribosome-binding factor A HCV85_002810 PF01509 TruB family pseudouridylate synthase (N terminal domain) HCV85_002810 PF16198 tRNA pseudouridylate synthase B C-terminal domain HCV85_002810 PF09157 Pseudouridine synthase II TruB, C-terminal HCV85_002815 PF00312 Ribosomal protein S15 HCV85_002820 PF00575 S1 RNA binding domain HCV85_002820 PF03725 3' exoribonuclease family, domain 2 HCV85_002820 PF00013 KH domain HCV85_002820 PF01138 3' exoribonuclease family, domain 1 HCV85_002820 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HCV85_002825 PF13181 Tetratricopeptide repeat HCV85_002825 PF07719 Tetratricopeptide repeat HCV85_002835 PF12343 Cold shock protein DEAD box A HCV85_002835 PF00271 Helicase conserved C-terminal domain HCV85_002835 PF03880 DbpA RNA binding domain HCV85_002835 PF00270 DEAD/DEAH box helicase HCV85_002840 PF03222 Tryptophan/tyrosine permease family HCV85_002845 PF00296 Luciferase-like monooxygenase HCV85_002850 PF01136 Peptidase family U32 HCV85_002855 PF01136 Peptidase family U32 HCV85_002860 PF02036 SCP-2 sterol transfer family HCV85_002865 PF13508 Acetyltransferase (GNAT) domain HCV85_002870 PF01541 GIY-YIG catalytic domain HCV85_002880 PF01965 DJ-1/PfpI family HCV85_002885 PF13460 NAD(P)H-binding HCV85_002890 PF03773 Predicted permease HCV85_002895 PF04972 BON domain HCV85_002900 PF13580 SIS domain HCV85_002905 PF02021 Uncharacterised protein family UPF0102 HCV85_002910 PF04348 LppC putative lipoprotein HCV85_002915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV85_002920 PF02661 Fic/DOC family HCV85_002920 PF13784 Fic/DOC family N-terminal HCV85_002925 PF08220 DeoR-like helix-turn-helix domain HCV85_002930 PF00107 Zinc-binding dehydrogenase HCV85_002930 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_002935 PF03611 PTS system sugar-specific permease component HCV85_002940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_002945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_002950 PF08013 Tagatose 6 phosphate kinase HCV85_002955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_002955 PF00381 PTS HPr component phosphorylation site HCV85_002960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_002960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_002965 PF00294 pfkB family carbohydrate kinase HCV85_002970 PF01116 Fructose-bisphosphate aldolase class-II HCV85_002975 PF00455 DeoR C terminal sensor domain HCV85_002975 PF08220 DeoR-like helix-turn-helix domain HCV85_002980 PF00294 pfkB family carbohydrate kinase HCV85_002985 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCV85_002985 PF08666 SAF domain HCV85_002990 PF07690 Major Facilitator Superfamily HCV85_002995 PF03328 HpcH/HpaI aldolase/citrate lyase family HCV85_003000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCV85_003000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV85_003005 PF02595 Glycerate kinase family HCV85_003030 PF02678 Pirin HCV85_003030 PF17954 Quercetinase C-terminal cupin domain HCV85_003035 PF03466 LysR substrate binding domain HCV85_003035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_003040 PF05656 Protein of unknown function (DUF805) HCV85_003045 PF13409 Glutathione S-transferase, N-terminal domain HCV85_003050 PF07681 DoxX HCV85_003055 PF13997 YqjK-like protein HCV85_003060 PF07332 Putative Actinobacterial Holin-X, holin superfamily III HCV85_003065 PF05957 Bacterial protein of unknown function (DUF883) HCV85_003070 PF06476 Protein of unknown function (DUF1090) HCV85_003075 PF13721 SecD export protein N-terminal TM region HCV85_003080 PF09335 SNARE associated Golgi protein HCV85_003085 PF00392 Bacterial regulatory proteins, gntR family HCV85_003085 PF07729 FCD domain HCV85_003090 PF07690 Major Facilitator Superfamily HCV85_003095 PF02614 Glucuronate isomerase HCV85_003100 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCV85_003100 PF08666 SAF domain HCV85_003105 PF10688 Bacterial inner membrane protein HCV85_003110 PF00375 Sodium:dicarboxylate symporter family HCV85_003115 PF03741 Integral membrane protein TerC family HCV85_003120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_003125 PF01863 Protein of unknown function DUF45 HCV85_003140 PF05175 Methyltransferase small domain HCV85_003145 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_003145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV85_003150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_003150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_003155 PF04198 Putative sugar-binding domain HCV85_003160 PF00005 ABC transporter HCV85_003165 PF02653 Branched-chain amino acid transport system / permease component HCV85_003170 PF02653 Branched-chain amino acid transport system / permease component HCV85_003175 PF13407 Periplasmic binding protein domain HCV85_003180 PF01791 DeoC/LacD family aldolase HCV85_003185 PF03992 Antibiotic biosynthesis monooxygenase HCV85_003190 PF00202 Aminotransferase class-III HCV85_003195 PF03551 Transcriptional regulator PadR-like family HCV85_003200 PF04954 Siderophore-interacting protein HCV85_003200 PF08021 Siderophore-interacting FAD-binding domain HCV85_003205 PF02734 DAK2 domain HCV85_003205 PF02733 Dak1 domain HCV85_003210 PF03610 PTS system fructose IIA component HCV85_003210 PF05524 PEP-utilising enzyme, N-terminal HCV85_003210 PF00391 PEP-utilising enzyme, mobile domain HCV85_003210 PF00381 PTS HPr component phosphorylation site HCV85_003215 PF02734 DAK2 domain HCV85_003220 PF02733 Dak1 domain HCV85_003230 PF00465 Iron-containing alcohol dehydrogenase HCV85_003235 PF00989 PAS fold HCV85_003235 PF02954 Bacterial regulatory protein, Fis family HCV85_003235 PF00158 Sigma-54 interaction domain HCV85_003240 PF01923 Cobalamin adenosyltransferase HCV85_003245 PF02288 Dehydratase medium subunit HCV85_003250 PF00465 Iron-containing alcohol dehydrogenase HCV85_003255 PF03928 Haem-degrading HCV85_003260 PF02286 Dehydratase large subunit HCV85_003265 PF02288 Dehydratase medium subunit HCV85_003270 PF02287 Dehydratase small subunit HCV85_003275 PF18427 DD-reactivating factor swiveling domain HCV85_003275 PF08841 Diol dehydratase reactivase ATPase-like domain HCV85_003280 PF00230 Major intrinsic protein HCV85_003285 PF06411 HdeA/HdeB family HCV85_003290 PF03729 Short repeat of unknown function (DUF308) HCV85_003295 PF10938 YfdX protein HCV85_003300 PF00512 His Kinase A (phospho-acceptor) domain HCV85_003300 PF01627 Hpt domain HCV85_003300 PF00072 Response regulator receiver domain HCV85_003300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_003300 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_003305 PF00196 Bacterial regulatory proteins, luxR family HCV85_003305 PF00072 Response regulator receiver domain HCV85_003325 PF03167 Uracil DNA glycosylase superfamily HCV85_003330 PF04545 Sigma-70, region 4 HCV85_003330 PF04539 Sigma-70 region 3 HCV85_003330 PF03979 Sigma-70 factor, region 1.1 HCV85_003330 PF04542 Sigma-70 region 2 HCV85_003330 PF00140 Sigma-70 factor, region 1.2 HCV85_003330 PF04546 Sigma-70, non-essential region HCV85_003335 PF08275 DNA primase catalytic core, N-terminal domain HCV85_003335 PF08278 DNA primase DnaG DnaB-binding HCV85_003335 PF01807 CHC2 zinc finger HCV85_003335 PF10410 DnaB-helicase binding domain of primase HCV85_003340 PF01165 Ribosomal protein S21 HCV85_003345 PF00814 Glycoprotease family HCV85_003355 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV85_003360 PF01730 UreF HCV85_003365 PF05194 UreE urease accessory protein, C-terminal domain HCV85_003365 PF02814 UreE urease accessory protein, N-terminal domain HCV85_003370 PF00449 Urease alpha-subunit, N-terminal domain HCV85_003370 PF01979 Amidohydrolase family HCV85_003375 PF00699 Urease beta subunit HCV85_003380 PF00547 Urease, gamma subunit HCV85_003385 PF01774 UreD urease accessory protein HCV85_003400 PF02660 Glycerol-3-phosphate acyltransferase HCV85_003405 PF02152 Dihydroneopterin aldolase HCV85_003410 PF02673 Bacitracin resistance protein BacA HCV85_003415 PF01966 HD domain HCV85_003415 PF01743 Poly A polymerase head domain HCV85_003415 PF12627 Probable RNA and SrmB- binding site of polymerase A HCV85_003420 PF08239 Bacterial SH3 domain HCV85_003425 PF01928 CYTH domain HCV85_003430 PF08335 GlnD PII-uridylyltransferase HCV85_003430 PF03710 Glutamate-ammonia ligase adenylyltransferase HCV85_003435 PF01467 Cytidylyltransferase-like HCV85_003435 PF00294 pfkB family carbohydrate kinase HCV85_003445 PF08971 Glycogen synthesis protein HCV85_003450 PF04380 Membrane fusogenic activity HCV85_003455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HCV85_003460 PF02535 ZIP Zinc transporter HCV85_003465 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HCV85_003470 PF03738 Glutathionylspermidine synthase preATP-grasp HCV85_003475 PF06693 Protein of unknown function (DUF1190) HCV85_003480 PF02321 Outer membrane efflux protein HCV85_003485 PF00293 NUDIX domain HCV85_003490 PF06853 Protein of unknown function (DUF1249) HCV85_003495 PF00149 Calcineurin-like phosphoesterase HCV85_003500 PF05728 Uncharacterised protein family (UPF0227) HCV85_003505 PF00204 DNA gyrase B HCV85_003505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_003505 PF01751 Toprim domain HCV85_003505 PF00986 DNA gyrase B subunit, carboxyl terminus HCV85_003510 PF03992 Antibiotic biosynthesis monooxygenase HCV85_003515 PF02525 Flavodoxin-like fold HCV85_003520 PF08521 Two-component sensor kinase N-terminal HCV85_003520 PF00512 His Kinase A (phospho-acceptor) domain HCV85_003520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_003525 PF00072 Response regulator receiver domain HCV85_003525 PF00486 Transcriptional regulatory protein, C terminal HCV85_003530 PF04076 Bacterial OB fold (BOF) protein HCV85_003535 PF06445 GyrI-like small molecule binding domain HCV85_003540 PF00521 DNA gyrase/topoisomerase IV, subunit A HCV85_003540 PF03989 DNA gyrase C-terminal domain, beta-propeller HCV85_003545 PF01553 Acyltransferase HCV85_003550 PF07731 Multicopper oxidase HCV85_003550 PF07732 Multicopper oxidase HCV85_003550 PF00394 Multicopper oxidase HCV85_003555 PF11842 Domain of unknown function (DUF3362) HCV85_003555 PF08497 Radical SAM N-terminal HCV85_003555 PF04055 Radical SAM superfamily HCV85_003565 PF00248 Aldo/keto reductase family HCV85_003570 PF00465 Iron-containing alcohol dehydrogenase HCV85_003575 PF06719 AraC-type transcriptional regulator N-terminus HCV85_003575 PF12833 Helix-turn-helix domain HCV85_003580 PF09335 SNARE associated Golgi protein HCV85_003585 PF01053 Cys/Met metabolism PLP-dependent enzyme HCV85_003590 PF01618 MotA/TolQ/ExbB proton channel family HCV85_003595 PF02472 Biopolymer transport protein ExbD/TolR HCV85_003605 PF04616 Glycosyl hydrolases family 43 HCV85_003605 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HCV85_003610 PF03350 Uncharacterized protein family, UPF0114 HCV85_003615 PF01738 Dienelactone hydrolase family HCV85_003620 PF11115 Protein of unknown function (DUF2623) HCV85_003625 PF02798 Glutathione S-transferase, N-terminal domain HCV85_003640 PF05257 CHAP domain HCV85_003640 PF03738 Glutathionylspermidine synthase preATP-grasp HCV85_003645 PF00155 Aminotransferase class I and II HCV85_003665 PF03466 LysR substrate binding domain HCV85_003665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_003670 PF01053 Cys/Met metabolism PLP-dependent enzyme HCV85_003675 PF00571 CBS domain HCV85_003675 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_003700 PF13614 AAA domain HCV85_003710 PF03796 DnaB-like helicase C terminal domain HCV85_003710 PF00772 DnaB-like helicase N terminal domain HCV85_003925 PF13693 Winged helix-turn-helix DNA-binding HCV85_003935 PF00313 'Cold-shock' DNA-binding domain HCV85_003940 PF13693 Winged helix-turn-helix DNA-binding HCV85_003980 PF03230 Antirestriction protein HCV85_003995 PF13362 Toprim domain HCV85_003995 PF18818 Metallopeptidase superfamily domain HCV85_003995 PF08401 Domain of unknown function (DUF1738) HCV85_004005 PF00589 Phage integrase family HCV85_004015 PF04474 Protein of unknown function (DUF554) HCV85_004020 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCV85_004020 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HCV85_004020 PF01276 Orn/Lys/Arg decarboxylase, major domain HCV85_004025 PF03825 Nucleoside H+ symporter HCV85_004030 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HCV85_004030 PF01464 Transglycosylase SLT domain HCV85_004035 PF04362 Bacterial Fe(2+) trafficking HCV85_004040 PF14815 NUDIX domain HCV85_004040 PF00730 HhH-GPD superfamily base excision DNA repair protein HCV85_004040 PF00633 Helix-hairpin-helix motif HCV85_004040 PF10576 Iron-sulfur binding domain of endonuclease III HCV85_004045 PF02390 Putative methyltransferase HCV85_004050 PF04320 Protein with unknown function (DUF469) HCV85_004055 PF11101 Protein of unknown function (DUF2884) HCV85_004060 PF04055 Radical SAM superfamily HCV85_004060 PF06969 HemN C-terminal domain HCV85_004065 PF01725 Ham1 family HCV85_004070 PF02594 Uncharacterised ACR, YggU family COG1872 HCV85_004075 PF02325 YGGT family HCV85_004080 PF01168 Alanine racemase, N-terminal domain HCV85_004085 PF00437 Type II/IV secretion system protein HCV85_004090 PF00196 Bacterial regulatory proteins, luxR family HCV85_004095 PF03652 Holliday junction resolvase HCV85_004100 PF02622 Uncharacterized ACR, COG1678 HCV85_004105 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HCV85_004105 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HCV85_004110 PF04452 RNA methyltransferase HCV85_004115 PF04231 Endonuclease I HCV85_004120 PF17283 SprT-like zinc ribbon domain HCV85_004120 PF10263 SprT-like family HCV85_004125 PF00083 Sugar (and other) transporter HCV85_004130 PF00438 S-adenosylmethionine synthetase, N-terminal domain HCV85_004130 PF02772 S-adenosylmethionine synthetase, central domain HCV85_004130 PF02773 S-adenosylmethionine synthetase, C-terminal domain HCV85_004145 PF17944 Arginine decarboxylase C-terminal helical extension HCV85_004145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HCV85_004145 PF17810 Arginine decarboxylase helical bundle domain HCV85_004150 PF00491 Arginase family HCV85_004160 PF00355 Rieske [2Fe-2S] domain HCV85_004170 PF00355 Rieske [2Fe-2S] domain HCV85_004180 PF01614 Bacterial transcriptional regulator HCV85_004180 PF09339 IclR helix-turn-helix domain HCV85_004190 PF14759 Reductase C-terminal HCV85_004190 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_004205 PF12697 Alpha/beta hydrolase family HCV85_004215 PF03447 Homoserine dehydrogenase, NAD binding domain HCV85_004215 PF01958 Domain of unknown function DUF108 HCV85_004220 PF00171 Aldehyde dehydrogenase family HCV85_004225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_004225 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_004225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_004230 PF03573 outer membrane porin, OprD family HCV85_004235 PF01435 Peptidase family M48 HCV85_004240 PF00456 Transketolase, thiamine diphosphate binding domain HCV85_004240 PF02780 Transketolase, C-terminal domain HCV85_004240 PF02779 Transketolase, pyrimidine binding domain HCV85_004245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCV85_004245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCV85_004250 PF00162 Phosphoglycerate kinase HCV85_004255 PF01116 Fructose-bisphosphate aldolase class-II HCV85_004260 PF05552 Conserved TM helix HCV85_004260 PF00924 Mechanosensitive ion channel HCV85_004265 PF01810 LysE type translocator HCV85_004270 PF04402 Protein of unknown function (DUF541) HCV85_004275 PF03466 LysR substrate binding domain HCV85_004275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_004280 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HCV85_004285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV85_004285 PF01842 ACT domain HCV85_004285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_004290 PF01812 5-formyltetrahydrofolate cyclo-ligase family HCV85_004300 PF05164 Cell division protein ZapA HCV85_004305 PF03695 Uncharacterised protein family (UPF0149) HCV85_004310 PF00557 Metallopeptidase family M24 HCV85_004310 PF05195 Aminopeptidase P, N-terminal domain HCV85_004315 PF01494 FAD binding domain HCV85_004320 PF01494 FAD binding domain HCV85_004325 PF08669 Glycine cleavage T-protein C-terminal barrel domain HCV85_004325 PF01571 Aminomethyltransferase folate-binding domain HCV85_004330 PF01597 Glycine cleavage H-protein HCV85_004335 PF02347 Glycine cleavage system P-protein HCV85_004345 PF00578 AhpC/TSA family HCV85_004365 PF00232 Glycosyl hydrolase family 1 HCV85_004370 PF01380 SIS domain HCV85_004370 PF01418 Helix-turn-helix domain, rpiR family HCV85_004375 PF04266 ASCH domain HCV85_004380 PF03006 Haemolysin-III related HCV85_004385 PF01571 Aminomethyltransferase folate-binding domain HCV85_004390 PF03937 Flavinator of succinate dehydrogenase HCV85_004395 PF07254 Membrane-bound toxin component of toxin-antitoxin system HCV85_004400 PF00258 Flavodoxin HCV85_004405 PF02899 Phage integrase, N-terminal SAM-like domain HCV85_004405 PF00589 Phage integrase family HCV85_004410 PF10411 Disulfide bond isomerase protein N-terminus HCV85_004410 PF13098 Thioredoxin-like domain HCV85_004415 PF01368 DHH family HCV85_004415 PF17768 RecJ OB domain HCV85_004415 PF02272 DHHA1 domain HCV85_004425 PF00152 tRNA synthetases class II (D, K and N) HCV85_004425 PF01336 OB-fold nucleic acid binding domain HCV85_004430 PF00293 NUDIX domain HCV85_004435 PF01551 Peptidase family M23 HCV85_004435 PF01476 LysM domain HCV85_004445 PF07690 Major Facilitator Superfamily HCV85_004450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_004450 PF03466 LysR substrate binding domain HCV85_004460 PF00248 Aldo/keto reductase family HCV85_004465 PF02525 Flavodoxin-like fold HCV85_004475 PF03466 LysR substrate binding domain HCV85_004475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_004490 PF01022 Bacterial regulatory protein, arsR family HCV85_004495 PF02040 Arsenical pump membrane protein HCV85_004500 PF03960 ArsC family HCV85_004505 PF00854 POT family HCV85_004510 PF08986 Domain of unknown function (DUF1889) HCV85_004515 PF02321 Outer membrane efflux protein HCV85_004520 PF04632 Fusaric acid resistance protein family HCV85_004525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_004525 PF00529 HlyD membrane-fusion protein of T1SS HCV85_004530 PF17090 Uncharacterised protein family HCV85_004535 PF06902 Divergent 4Fe-4S mono-cluster HCV85_004540 PF14542 GCN5-related N-acetyl-transferase HCV85_004550 PF09160 FimH, mannose binding HCV85_004550 PF00419 Fimbrial protein HCV85_004560 PF00419 Fimbrial protein HCV85_004565 PF00577 Outer membrane usher protein HCV85_004565 PF13953 PapC C-terminal domain HCV85_004565 PF13954 PapC N-terminal domain HCV85_004570 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV85_004570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV85_004575 PF00419 Fimbrial protein HCV85_004580 PF00419 Fimbrial protein HCV85_004585 PF00589 Phage integrase family HCV85_004590 PF00589 Phage integrase family HCV85_004595 PF03824 High-affinity nickel-transport protein HCV85_004600 PF01047 MarR family HCV85_004605 PF00892 EamA-like transporter family HCV85_004615 PF00419 Fimbrial protein HCV85_004620 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV85_004620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV85_004625 PF13953 PapC C-terminal domain HCV85_004625 PF00577 Outer membrane usher protein HCV85_004625 PF13954 PapC N-terminal domain HCV85_004630 PF00419 Fimbrial protein HCV85_004645 PF00072 Response regulator receiver domain HCV85_004645 PF00196 Bacterial regulatory proteins, luxR family HCV85_004655 PF00248 Aldo/keto reductase family HCV85_004660 PF03222 Tryptophan/tyrosine permease family HCV85_004670 PF03466 LysR substrate binding domain HCV85_004670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_004675 PF00108 Thiolase, N-terminal domain HCV85_004675 PF02803 Thiolase, C-terminal domain HCV85_004680 PF06178 Oligogalacturonate-specific porin protein (KdgM) HCV85_004685 PF14583 Oligogalacturonate lyase HCV85_004695 PF00083 Sugar (and other) transporter HCV85_004700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV85_004700 PF00356 Bacterial regulatory proteins, lacI family HCV85_004710 PF01306 LacY proton/sugar symporter HCV85_004715 PF08244 Glycosyl hydrolases family 32 C terminal HCV85_004715 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCV85_004730 PF00005 ABC transporter HCV85_004730 PF17912 MalK OB fold domain HCV85_004735 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_004740 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_004745 PF16867 Dimethlysulfonioproprionate lyase HCV85_004750 PF01177 Asp/Glu/Hydantoin racemase HCV85_004755 PF03466 LysR substrate binding domain HCV85_004755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_004760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HCV85_004760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HCV85_004765 PF00356 Bacterial regulatory proteins, lacI family HCV85_004770 PF02378 Phosphotransferase system, EIIC HCV85_004775 PF00232 Glycosyl hydrolase family 1 HCV85_004780 PF07729 FCD domain HCV85_004780 PF00392 Bacterial regulatory proteins, gntR family HCV85_004790 PF00356 Bacterial regulatory proteins, lacI family HCV85_004800 PF00501 AMP-binding enzyme HCV85_004800 PF01553 Acyltransferase HCV85_004805 PF07690 Major Facilitator Superfamily HCV85_004810 PF00248 Aldo/keto reductase family HCV85_004815 PF06004 Bacterial protein of unknown function (DUF903) HCV85_004820 PF03741 Integral membrane protein TerC family HCV85_004825 PF02976 DNA mismatch repair enzyme MutH HCV85_004835 PF00293 NUDIX domain HCV85_004840 PF00391 PEP-utilising enzyme, mobile domain HCV85_004840 PF02896 PEP-utilising enzyme, TIM barrel domain HCV85_004840 PF05524 PEP-utilising enzyme, N-terminal HCV85_004840 PF01590 GAF domain HCV85_004845 PF01790 Prolipoprotein diacylglyceryl transferase HCV85_004850 PF00303 Thymidylate synthase HCV85_004855 PF07963 Prokaryotic N-terminal methylation motif HCV85_004860 PF07963 Prokaryotic N-terminal methylation motif HCV85_004865 PF10713 Protein of unknown function (DUF2509) HCV85_004870 PF12528 Type II secretion prepilin peptidase dependent protein C HCV85_004870 PF07963 Prokaryotic N-terminal methylation motif HCV85_004875 PF17946 RecC C-terminal domain HCV85_004880 PF00675 Insulinase (Peptidase family M16) HCV85_004880 PF16187 Middle or third domain of peptidase_M16 HCV85_004880 PF05193 Peptidase M16 inactive domain HCV85_004885 PF12705 PD-(D/E)XK nuclease superfamily HCV85_004885 PF13361 UvrD-like helicase C-terminal domain HCV85_004885 PF00580 UvrD/REP helicase N-terminal domain HCV85_004890 PF13538 UvrD-like helicase C-terminal domain HCV85_004900 PF00583 Acetyltransferase (GNAT) family HCV85_004900 PF00696 Amino acid kinase family HCV85_004905 PF01520 N-acetylmuramoyl-L-alanine amidase HCV85_004905 PF11741 AMIN domain HCV85_004910 PF00155 Aminotransferase class I and II HCV85_004915 PF00288 GHMP kinases N terminal domain HCV85_004920 PF00871 Acetokinase family HCV85_004925 PF10662 Ethanolamine utilisation - propanediol utilisation HCV85_004930 PF00936 BMC domain HCV85_004940 PF13375 RnfC Barrel sandwich hybrid domain HCV85_004940 PF13237 4Fe-4S dicluster domain HCV85_004940 PF10531 SLBB domain HCV85_004940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HCV85_004945 PF00465 Iron-containing alcohol dehydrogenase HCV85_004945 PF00171 Aldehyde dehydrogenase family HCV85_004950 PF00171 Aldehyde dehydrogenase family HCV85_004955 PF01923 Cobalamin adenosyltransferase HCV85_004960 PF03319 Ethanolamine utilisation protein EutN/carboxysome HCV85_004970 PF06130 Phosphate propanoyltransferase HCV85_004975 PF00936 BMC domain HCV85_004980 PF00936 BMC domain HCV85_004990 PF08841 Diol dehydratase reactivase ATPase-like domain HCV85_004990 PF18427 DD-reactivating factor swiveling domain HCV85_004995 PF02287 Dehydratase small subunit HCV85_005000 PF02288 Dehydratase medium subunit HCV85_005005 PF02286 Dehydratase large subunit HCV85_005010 PF00936 BMC domain HCV85_005015 PF00936 BMC domain HCV85_005020 PF00230 Major intrinsic protein HCV85_005025 PF12833 Helix-turn-helix domain HCV85_005025 PF10114 Sensory domain found in PocR HCV85_005030 PF01609 Transposase DDE domain HCV85_005030 PF05598 Transposase domain (DUF772) HCV85_005035 PF07685 CobB/CobQ-like glutamine amidotransferase domain HCV85_005035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HCV85_005040 PF03186 CobD/Cbib protein HCV85_005045 PF02570 Precorrin-8X methylmutase HCV85_005050 PF01888 CbiD HCV85_005055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV85_005060 PF05175 Methyltransferase small domain HCV85_005065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV85_005070 PF11761 Cobalamin biosynthesis central region HCV85_005070 PF01890 Cobalamin synthesis G C-terminus HCV85_005070 PF11760 Cobalamin synthesis G N-terminal HCV85_005075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV85_005080 PF02571 Precorrin-6x reductase CbiJ/CobK HCV85_005085 PF06180 Cobalt chelatase (CbiK) HCV85_005090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV85_005095 PF01891 Cobalt uptake substrate-specific transmembrane region HCV85_005100 PF02553 Cobalt transport protein component CbiN HCV85_005105 PF02361 Cobalt transport protein HCV85_005110 PF00005 ABC transporter HCV85_005115 PF07685 CobB/CobQ-like glutamine amidotransferase domain HCV85_005120 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HCV85_005125 PF02277 Phosphoribosyltransferase HCV85_005145 PF06725 3D domain HCV85_005145 PF03562 MltA specific insert domain HCV85_005150 PF00899 ThiF family HCV85_005155 PF02657 Fe-S metabolism associated domain HCV85_005160 PF00266 Aminotransferase class-V HCV85_005165 PF06004 Bacterial protein of unknown function (DUF903) HCV85_005170 PF03466 LysR substrate binding domain HCV85_005170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_005175 PF04241 Protein of unknown function (DUF423) HCV85_005180 PF18125 RlmM ferredoxin-like domain HCV85_005180 PF01728 FtsJ-like methyltransferase HCV85_005185 PF00455 DeoR C terminal sensor domain HCV85_005185 PF08220 DeoR-like helix-turn-helix domain HCV85_005190 PF05025 RbsD / FucU transport protein family HCV85_005195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_005195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_005200 PF07881 L-fucose isomerase, first N-terminal domain HCV85_005200 PF02952 L-fucose isomerase, C-terminal domain HCV85_005200 PF07882 L-fucose isomerase, second N-terminal domain HCV85_005205 PF07690 Major Facilitator Superfamily HCV85_005210 PF00596 Class II Aldolase and Adducin N-terminal domain HCV85_005215 PF00465 Iron-containing alcohol dehydrogenase HCV85_005220 PF01367 5'-3' exonuclease, C-terminal SAM fold HCV85_005220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCV85_005225 PF00158 Sigma-54 interaction domain HCV85_005235 PF00296 Luciferase-like monooxygenase HCV85_005245 PF00296 Luciferase-like monooxygenase HCV85_005250 PF00005 ABC transporter HCV85_005255 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_005260 PF03180 NLPA lipoprotein HCV85_005265 PF07690 Major Facilitator Superfamily HCV85_005275 PF09084 NMT1/THI5 like HCV85_005280 PF03313 Serine dehydratase alpha chain HCV85_005280 PF03315 Serine dehydratase beta chain HCV85_005290 PF11892 Domain of unknown function (DUF3412) HCV85_005290 PF03641 Possible lysine decarboxylase HCV85_005290 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HCV85_005295 PF14489 QueF-like protein HCV85_005295 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HCV85_005300 PF07348 Syd protein (SUKH-2) HCV85_005305 PF04287 tRNA pseudouridine synthase C HCV85_005310 PF00849 RNA pseudouridylate synthase HCV85_005315 PF00258 Flavodoxin HCV85_005320 PF07690 Major Facilitator Superfamily HCV85_005325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV85_005325 PF13378 Enolase C-terminal domain-like HCV85_005330 PF13378 Enolase C-terminal domain-like HCV85_005335 PF02595 Glycerate kinase family HCV85_005340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HCV85_005340 PF01627 Hpt domain HCV85_005340 PF00512 His Kinase A (phospho-acceptor) domain HCV85_005340 PF00072 Response regulator receiver domain HCV85_005340 PF00672 HAMP domain HCV85_005340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_005345 PF01938 TRAM domain HCV85_005345 PF05958 tRNA (Uracil-5-)-methyltransferase HCV85_005350 PF13291 ACT domain HCV85_005350 PF04607 Region found in RelA / SpoT proteins HCV85_005350 PF02824 TGS domain HCV85_005355 PF03819 MazG nucleotide pyrophosphohydrolase domain HCV85_005360 PF06418 CTP synthase N-terminus HCV85_005360 PF00117 Glutamine amidotransferase class-I HCV85_005365 PF00113 Enolase, C-terminal TIM barrel domain HCV85_005365 PF03952 Enolase, N-terminal domain HCV85_005375 PF04055 Radical SAM superfamily HCV85_005380 PF01242 6-pyruvoyl tetrahydropterin synthase HCV85_005385 PF00667 FAD binding domain HCV85_005385 PF00258 Flavodoxin HCV85_005385 PF00175 Oxidoreductase NAD-binding domain HCV85_005390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCV85_005390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCV85_005395 PF01507 Phosphoadenosine phosphosulfate reductase family HCV85_005400 PF04389 Peptidase family M28 HCV85_005405 PF14824 Sirohaem biosynthesis protein central HCV85_005405 PF10414 Sirohaem synthase dimerisation region HCV85_005405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCV85_005410 PF01507 Phosphoadenosine phosphosulfate reductase family HCV85_005415 PF00009 Elongation factor Tu GTP binding domain HCV85_005425 PF12084 Protein of unknown function (DUF3561) HCV85_005430 PF04977 Septum formation initiator HCV85_005435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HCV85_005440 PF02542 YgbB family HCV85_005445 PF01142 tRNA pseudouridine synthase D (TruD) HCV85_005450 PF01975 Survival protein SurE HCV85_005460 PF01551 Peptidase family M23 HCV85_005460 PF01476 LysM domain HCV85_005465 PF04542 Sigma-70 region 2 HCV85_005465 PF04539 Sigma-70 region 3 HCV85_005465 PF00140 Sigma-70 factor, region 1.2 HCV85_005465 PF04545 Sigma-70, region 4 HCV85_005475 PF07690 Major Facilitator Superfamily HCV85_005480 PF03466 LysR substrate binding domain HCV85_005480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_005485 PF01047 MarR family HCV85_005490 PF02441 Flavoprotein HCV85_005495 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCV85_005505 PF01848 Hok/gef family HCV85_005510 PF00488 MutS domain V HCV85_005510 PF05192 MutS domain III HCV85_005510 PF01624 MutS domain I HCV85_005510 PF05190 MutS family domain IV HCV85_005510 PF05188 MutS domain II HCV85_005530 PF00005 ABC transporter HCV85_005535 PF01032 FecCD transport family HCV85_005540 PF01497 Periplasmic binding protein HCV85_005545 PF05171 Haemin-degrading HemS.ChuX domain HCV85_005550 PF07715 TonB-dependent Receptor Plug Domain HCV85_005550 PF00593 TonB dependent receptor HCV85_005560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_005560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_005560 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_005565 PF03547 Membrane transport protein HCV85_005575 PF11756 Nitrous oxide-stimulated promoter HCV85_005580 PF00950 ABC 3 transport family HCV85_005585 PF00950 ABC 3 transport family HCV85_005590 PF00005 ABC transporter HCV85_005595 PF01297 Zinc-uptake complex component A periplasmic HCV85_005600 PF00356 Bacterial regulatory proteins, lacI family HCV85_005605 PF00480 ROK family HCV85_005610 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV85_005615 PF02378 Phosphotransferase system, EIIC HCV85_005620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_005625 PF02378 Phosphotransferase system, EIIC HCV85_005630 PF02264 LamB porin HCV85_005640 PF00232 Glycosyl hydrolase family 1 HCV85_005645 PF00158 Sigma-54 interaction domain HCV85_005645 PF01590 GAF domain HCV85_005645 PF02954 Bacterial regulatory protein, Fis family HCV85_005650 PF02769 AIR synthase related protein, C-terminal domain HCV85_005650 PF00586 AIR synthase related protein, N-terminal domain HCV85_005655 PF01924 Hydrogenase formation hypA family HCV85_005660 PF01455 HupF/HypC family HCV85_005665 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV85_005670 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HCV85_005675 PF11046 Transcriptional repressor of hyc and hyp operons HCV85_005680 PF13247 4Fe-4S dicluster domain HCV85_005685 PF00361 Proton-conducting membrane transporter HCV85_005690 PF00146 NADH dehydrogenase HCV85_005695 PF00374 Nickel-dependent hydrogenase HCV85_005695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HCV85_005695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HCV85_005700 PF12838 4Fe-4S dicluster domain HCV85_005705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HCV85_005710 PF07450 Formate hydrogenlyase maturation protein HycH HCV85_005715 PF01750 Hydrogenase maturation protease HCV85_005720 PF08845 Toxin SymE, type I toxin-antitoxin system HCV85_005725 PF00232 Glycosyl hydrolase family 1 HCV85_005730 PF00367 phosphotransferase system, EIIB HCV85_005730 PF02378 Phosphotransferase system, EIIC HCV85_005735 PF00356 Bacterial regulatory proteins, lacI family HCV85_005740 PF13247 4Fe-4S dicluster domain HCV85_005740 PF12800 4Fe-4S binding domain HCV85_005745 PF07503 HypF finger HCV85_005745 PF01300 Telomere recombination HCV85_005745 PF17788 HypF Kae1-like domain HCV85_005745 PF00708 Acylphosphatase HCV85_005750 PF03824 High-affinity nickel-transport protein HCV85_005755 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_005755 PF18113 Rubredoxin binding C-terminal domain HCV85_005760 PF00301 Rubredoxin HCV85_005760 PF00753 Metallo-beta-lactamase superfamily HCV85_005760 PF00258 Flavodoxin HCV85_005765 PF00158 Sigma-54 interaction domain HCV85_005765 PF01590 GAF domain HCV85_005770 PF00571 CBS domain HCV85_005770 PF01380 SIS domain HCV85_005775 PF08220 DeoR-like helix-turn-helix domain HCV85_005775 PF00455 DeoR C terminal sensor domain HCV85_005780 PF06923 Glucitol operon activator protein (GutM) HCV85_005785 PF00106 short chain dehydrogenase HCV85_005790 PF03829 PTS system glucitol/sorbitol-specific IIA component HCV85_005795 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HCV85_005795 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HCV85_005800 PF03608 PTS system enzyme II sorbitol-specific factor HCV85_005805 PF13406 Transglycosylase SLT domain HCV85_005810 PF00005 ABC transporter HCV85_005815 PF00950 ABC 3 transport family HCV85_005820 PF01297 Zinc-uptake complex component A periplasmic HCV85_005825 PF02464 Competence-damaged protein HCV85_005830 PF00154 recA bacterial DNA recombination protein HCV85_005835 PF02631 RecX family HCV85_005840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCV85_005840 PF01411 tRNA synthetases class II (A) HCV85_005840 PF02272 DHHA1 domain HCV85_005845 PF02599 Global regulator protein family HCV85_005875 PF04972 BON domain HCV85_005880 PF13419 Haloacid dehalogenase-like hydrolase HCV85_005885 PF09335 SNARE associated Golgi protein HCV85_005890 PF04262 Glutamate-cysteine ligase HCV85_005895 PF02664 S-Ribosylhomocysteinase (LuxS) HCV85_005900 PF12852 Cupin HCV85_005900 PF12833 Helix-turn-helix domain HCV85_005905 PF00682 HMGL-like HCV85_005905 PF08502 LeuA allosteric (dimerisation) domain HCV85_005910 PF07690 Major Facilitator Superfamily HCV85_005915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_005915 PF00529 HlyD membrane-fusion protein of T1SS HCV85_005920 PF01047 MarR family HCV85_005925 PF05437 Branched-chain amino acid transport protein (AzlD) HCV85_005930 PF03591 AzlC protein HCV85_005935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCV85_005940 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_005945 PF00571 CBS domain HCV85_005945 PF00005 ABC transporter HCV85_005950 PF00268 Ribonucleotide reductase, small chain HCV85_005955 PF00317 Ribonucleotide reductase, all-alpha domain HCV85_005955 PF08343 Ribonucleotide reductase N-terminal HCV85_005955 PF02867 Ribonucleotide reductase, barrel domain HCV85_005960 PF07972 NrdI Flavodoxin like HCV85_005965 PF00462 Glutaredoxin HCV85_005970 PF02627 Carboxymuconolactone decarboxylase family HCV85_005975 PF00155 Aminotransferase class I and II HCV85_005975 PF00392 Bacterial regulatory proteins, gntR family HCV85_005980 PF05957 Bacterial protein of unknown function (DUF883) HCV85_005985 PF09400 Protein of unknown function (DUF2002) HCV85_005990 PF06610 L-alanine exporter HCV85_005995 PF00816 H-NS histone family HCV85_006010 PF00581 Rhodanese-like domain HCV85_006010 PF11127 Protein of unknown function (DUF2892) HCV85_006015 PF01022 Bacterial regulatory protein, arsR family HCV85_006020 PF02525 Flavodoxin-like fold HCV85_006025 PF03466 LysR substrate binding domain HCV85_006025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_006030 PF01590 GAF domain HCV85_006030 PF02954 Bacterial regulatory protein, Fis family HCV85_006030 PF00158 Sigma-54 interaction domain HCV85_006035 PF00171 Aldehyde dehydrogenase family HCV85_006040 PF16970 Type-1 fimbrial protein, A HCV85_006045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV85_006045 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV85_006050 PF13953 PapC C-terminal domain HCV85_006050 PF13954 PapC N-terminal domain HCV85_006050 PF00577 Outer membrane usher protein HCV85_006065 PF00577 Outer membrane usher protein HCV85_006065 PF13954 PapC N-terminal domain HCV85_006065 PF13953 PapC C-terminal domain HCV85_006070 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV85_006070 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV85_006075 PF00419 Fimbrial protein HCV85_006080 PF00072 Response regulator receiver domain HCV85_006080 PF00196 Bacterial regulatory proteins, luxR family HCV85_006095 PF00106 short chain dehydrogenase HCV85_006100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_006105 PF00596 Class II Aldolase and Adducin N-terminal domain HCV85_006110 PF00005 ABC transporter HCV85_006115 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_006130 PF00491 Arginase family HCV85_006135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_006135 PF03466 LysR substrate binding domain HCV85_006145 PF00873 AcrB/AcrD/AcrF family HCV85_006150 PF00529 HlyD membrane-fusion protein of T1SS HCV85_006150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_006155 PF12833 Helix-turn-helix domain HCV85_006155 PF06445 GyrI-like small molecule binding domain HCV85_006165 PF03466 LysR substrate binding domain HCV85_006165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_006180 PF02899 Phage integrase, N-terminal SAM-like domain HCV85_006180 PF00589 Phage integrase family HCV85_006185 PF07022 Bacteriophage CI repressor helix-turn-helix domain HCV85_006185 PF16452 Bacteriophage CI repressor C-terminal domain HCV85_006195 PF06892 Phage regulatory protein CII (CP76) HCV85_006205 PF17282 Family of unknown function (DUF5347) HCV85_006215 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCV85_006220 PF02086 D12 class N6 adenine-specific DNA methyltransferase HCV85_006225 PF05840 Bacteriophage replication gene A protein (GPA) HCV85_006235 PF06183 DinI-like family HCV85_006370 PF17482 Phage tail sheath C-terminal domain HCV85_006370 PF04984 Phage tail sheath protein subtilisin-like domain HCV85_006405 PF04606 Ogr/Delta-like zinc finger HCV85_006420 PF01668 SmpB protein HCV85_006425 PF03364 Polyketide cyclase / dehydrase and lipid transport HCV85_006430 PF03658 RnfH family Ubiquitin HCV85_006435 PF04355 SmpA / OmlA family HCV85_006440 PF02463 RecF/RecN/SMC N terminal domain HCV85_006445 PF01513 ATP-NAD kinase HCV85_006450 PF01025 GrpE HCV85_006455 PF01595 Cyclin M transmembrane N-terminal domain HCV85_006455 PF03471 Transporter associated domain HCV85_006455 PF00571 CBS domain HCV85_006460 PF01578 Cytochrome C assembly protein HCV85_006465 PF02978 Signal peptide binding domain HCV85_006465 PF00448 SRP54-type protein, GTPase domain HCV85_006465 PF02881 SRP54-type protein, helical bundle domain HCV85_006470 PF00886 Ribosomal protein S16 HCV85_006475 PF05239 PRC-barrel domain HCV85_006475 PF01782 RimM N-terminal domain HCV85_006480 PF01746 tRNA (Guanine-1)-methyltransferase HCV85_006485 PF01245 Ribosomal protein L19 HCV85_006500 PF00691 OmpA family HCV85_006505 PF00990 Diguanylate cyclase, GGDEF domain HCV85_006505 PF17152 Periplasmic sensor domain HCV85_006510 PF13689 YfiR/HmsC-like HCV85_006515 PF00793 DAHP synthetase I family HCV85_006520 PF02153 Prephenate dehydrogenase HCV85_006520 PF01817 Chorismate mutase type II HCV85_006525 PF08450 SMP-30/Gluconolactonase/LRE-like region HCV85_006530 PF00800 Prephenate dehydratase HCV85_006530 PF01817 Chorismate mutase type II HCV85_006540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HCV85_006545 PF13525 Outer membrane lipoprotein HCV85_006550 PF00849 RNA pseudouridylate synthase HCV85_006550 PF01479 S4 domain HCV85_006555 PF02578 Multi-copper polyphenol oxidoreductase laccase HCV85_006560 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_006560 PF10431 C-terminal, D2-small domain, of ClpB protein HCV85_006560 PF07724 AAA domain (Cdc48 subfamily) HCV85_006560 PF17871 AAA lid domain HCV85_006560 PF02861 Clp amino terminal domain, pathogenicity island component HCV85_006585 PF00083 Sugar (and other) transporter HCV85_006590 PF10043 Predicted periplasmic lipoprotein (DUF2279) HCV85_006595 PF13091 PLD-like domain HCV85_006600 PF00583 Acetyltransferase (GNAT) family HCV85_006600 PF13380 CoA binding domain HCV85_006600 PF13607 Succinyl-CoA ligase like flavodoxin domain HCV85_006605 PF03942 DTW domain HCV85_006610 PF00085 Thioredoxin HCV85_006615 PF00588 SpoU rRNA Methylase family HCV85_006615 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCV85_006620 PF03167 Uracil DNA glycosylase superfamily HCV85_006625 PF01228 Glycine radical HCV85_006630 PF00271 Helicase conserved C-terminal domain HCV85_006630 PF00270 DEAD/DEAH box helicase HCV85_006635 PF05175 Methyltransferase small domain HCV85_006640 PF00890 FAD binding domain HCV85_006640 PF02910 Fumarate reductase flavoprotein C-term HCV85_006650 PF04542 Sigma-70 region 2 HCV85_006650 PF08281 Sigma-70, region 4 HCV85_006655 PF03873 Anti sigma-E protein RseA, C-terminal domain HCV85_006655 PF03872 Anti sigma-E protein RseA, N-terminal domain HCV85_006660 PF17188 MucB/RseB C-terminal domain HCV85_006660 PF03888 MucB/RseB N-terminal domain HCV85_006670 PF06421 GTP-binding protein LepA C-terminus HCV85_006670 PF00679 Elongation factor G C-terminus HCV85_006670 PF00009 Elongation factor Tu GTP binding domain HCV85_006670 PF03144 Elongation factor Tu domain 2 HCV85_006675 PF10502 Signal peptidase, peptidase S26 HCV85_006680 PF14622 Ribonuclease-III-like HCV85_006680 PF00035 Double-stranded RNA binding motif HCV85_006685 PF07650 KH domain HCV85_006685 PF01926 50S ribosome-binding GTPase HCV85_006690 PF02565 Recombination protein O C terminal HCV85_006690 PF11967 Recombination protein O N terminal HCV85_006695 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HCV85_006700 PF01648 4'-phosphopantetheinyl transferase superfamily HCV85_006705 PF12838 4Fe-4S dicluster domain HCV85_006710 PF01418 Helix-turn-helix domain, rpiR family HCV85_006710 PF01380 SIS domain HCV85_006720 PF14437 MafB19-like deaminase HCV85_006725 PF01464 Transglycosylase SLT domain HCV85_006725 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_006730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HCV85_006730 PF02769 AIR synthase related protein, C-terminal domain HCV85_006730 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HCV85_006735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_006735 PF00512 His Kinase A (phospho-acceptor) domain HCV85_006740 PF13942 YfhG lipoprotein HCV85_006745 PF00158 Sigma-54 interaction domain HCV85_006745 PF00072 Response regulator receiver domain HCV85_006750 PF00543 Nitrogen regulatory protein P-II HCV85_006755 PF00175 Oxidoreductase NAD-binding domain HCV85_006755 PF00042 Globin HCV85_006755 PF00970 Oxidoreductase FAD-binding domain HCV85_006760 PF00464 Serine hydroxymethyltransferase HCV85_006765 PF07681 DoxX HCV85_006770 PF00480 ROK family HCV85_006775 PF13181 Tetratricopeptide repeat HCV85_006775 PF17128 Domain of unknown function (DUF5107) HCV85_006780 PF00083 Sugar (and other) transporter HCV85_006785 PF01263 Aldose 1-epimerase HCV85_006790 PF12832 MFS_1 like family HCV85_006795 PF00874 PRD domain HCV85_006800 PF06226 Protein of unknown function (DUF1007) HCV85_006805 PF03824 High-affinity nickel-transport protein HCV85_006815 PF00459 Inositol monophosphatase family HCV85_006820 PF00588 SpoU rRNA Methylase family HCV85_006825 PF02082 Transcriptional regulator HCV85_006830 PF00266 Aminotransferase class-V HCV85_006835 PF01592 NifU-like N terminal domain HCV85_006840 PF01521 Iron-sulphur cluster biosynthesis HCV85_006845 PF00226 DnaJ domain HCV85_006845 PF07743 HSCB C-terminal oligomerisation domain HCV85_006850 PF00012 Hsp70 protein HCV85_006855 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_006860 PF04384 Iron-sulphur cluster assembly HCV85_006865 PF12404 Peptidase HCV85_006865 PF00883 Cytosol aminopeptidase family, catalytic domain HCV85_006870 PF07179 SseB protein N-terminal domain HCV85_006870 PF14581 SseB protein C-terminal domain HCV85_006880 PF00581 Rhodanese-like domain HCV85_006885 PF17962 Bacterial macroglobulin domain 6 HCV85_006885 PF01835 MG2 domain HCV85_006885 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HCV85_006885 PF07678 A-macroglobulin TED domain HCV85_006885 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HCV85_006885 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HCV85_006885 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HCV85_006885 PF00207 Alpha-2-macroglobulin family HCV85_006885 PF07703 Alpha-2-macroglobulin bait region domain HCV85_006890 PF06832 Penicillin-Binding Protein C-terminus Family HCV85_006890 PF00912 Transglycosylase HCV85_006890 PF00905 Penicillin binding protein transpeptidase domain HCV85_006895 PF00334 Nucleoside diphosphate kinase HCV85_006900 PF04055 Radical SAM superfamily HCV85_006905 PF13464 Domain of unknown function (DUF4115) HCV85_006910 PF04551 GcpE protein HCV85_006915 PF03129 Anticodon binding domain HCV85_006915 PF13393 Histidyl-tRNA synthetase HCV85_006920 PF09976 Tetratricopeptide repeat-like domain HCV85_006925 PF13360 PQQ-like domain HCV85_006930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HCV85_006930 PF01926 50S ribosome-binding GTPase HCV85_006940 PF07191 zinc-ribbons HCV85_006945 PF02601 Exonuclease VII, large subunit HCV85_006945 PF13742 OB-fold nucleic acid binding domain HCV85_006950 PF00478 IMP dehydrogenase / GMP reductase domain HCV85_006950 PF00571 CBS domain HCV85_006955 PF00117 Glutamine amidotransferase class-I HCV85_006955 PF02540 NAD synthase HCV85_006955 PF00958 GMP synthase C terminal domain HCV85_006995 PF03837 RecT family HCV85_007095 PF10668 Phage terminase small subunit HCV85_007095 PF03592 Terminase small subunit HCV85_007195 PF02498 BRO family, N-terminal domain HCV85_007195 PF10548 P22AR C-terminal domain HCV85_007240 PF00182 Chitinase class I HCV85_007250 PF00884 Sulfatase HCV85_007255 PF04055 Radical SAM superfamily HCV85_007255 PF13186 Iron-sulfur cluster-binding domain HCV85_007265 PF03466 LysR substrate binding domain HCV85_007265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_007270 PF11119 Protein of unknown function (DUF2633) HCV85_007275 PF00563 EAL domain HCV85_007275 PF05231 MASE1 HCV85_007280 PF02541 Ppx/GppA phosphatase family HCV85_007285 PF02503 Polyphosphate kinase middle domain HCV85_007285 PF13089 Polyphosphate kinase N-terminal domain HCV85_007285 PF17941 Polyphosphate kinase C-terminal domain 1 HCV85_007285 PF13090 Polyphosphate kinase C-terminal domain 2 HCV85_007290 PF00551 Formyl transferase HCV85_007295 PF02769 AIR synthase related protein, C-terminal domain HCV85_007295 PF00586 AIR synthase related protein, N-terminal domain HCV85_007300 PF00480 ROK family HCV85_007305 PF00232 Glycosyl hydrolase family 1 HCV85_007315 PF00860 Permease family HCV85_007320 PF00308 Bacterial dnaA protein HCV85_007325 PF04754 Putative transposase, YhgA-like HCV85_007330 PF03960 ArsC family HCV85_007335 PF01435 Peptidase family M48 HCV85_007345 PF01594 AI-2E family transporter HCV85_007350 PF00578 AhpC/TSA family HCV85_007355 PF01842 ACT domain HCV85_007360 PF00701 Dihydrodipicolinate synthetase family HCV85_007365 PF06804 NlpB/DapX lipoprotein HCV85_007370 PF01259 SAICAR synthetase HCV85_007375 PF04228 Putative neutral zinc metallopeptidase HCV85_007380 PF05127 Helicase HCV85_007380 PF08351 Domain of unknown function (DUF1726) HCV85_007380 PF17176 tRNA-binding domain HCV85_007380 PF13718 GNAT acetyltransferase 2 HCV85_007385 PF02230 Phospholipase/Carboxylesterase HCV85_007390 PF13980 Uncharacterised protein family (UPF0370) HCV85_007395 PF01546 Peptidase family M20/M25/M40 HCV85_007395 PF07687 Peptidase dimerisation domain HCV85_007400 PF03960 ArsC family HCV85_007410 PF00873 AcrB/AcrD/AcrF family HCV85_007415 PF13247 4Fe-4S dicluster domain HCV85_007415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HCV85_007415 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_007420 PF00293 NUDIX domain HCV85_007425 PF06674 Protein of unknown function (DUF1176) HCV85_007430 PF00456 Transketolase, thiamine diphosphate binding domain HCV85_007430 PF02779 Transketolase, pyrimidine binding domain HCV85_007430 PF02780 Transketolase, C-terminal domain HCV85_007435 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCV85_007440 PF01515 Phosphate acetyl/butaryl transferase HCV85_007440 PF03949 Malic enzyme, NAD binding domain HCV85_007440 PF00390 Malic enzyme, N-terminal domain HCV85_007445 PF00936 BMC domain HCV85_007450 PF10662 Ethanolamine utilisation - propanediol utilisation HCV85_007455 PF06249 Ethanolamine utilisation protein EutQ HCV85_007460 PF01923 Cobalamin adenosyltransferase HCV85_007465 PF01515 Phosphate acetyl/butaryl transferase HCV85_007470 PF00936 BMC domain HCV85_007475 PF03319 Ethanolamine utilisation protein EutN/carboxysome HCV85_007480 PF00171 Aldehyde dehydrogenase family HCV85_007490 PF00465 Iron-containing alcohol dehydrogenase HCV85_007495 PF04346 Ethanolamine utilisation protein, EutH HCV85_007500 PF06277 Ethanolamine utilisation protein EutA HCV85_007505 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HCV85_007510 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HCV85_007515 PF00936 BMC domain HCV85_007520 PF16365 Ethanolamine utilization protein EutK C-terminus HCV85_007520 PF00936 BMC domain HCV85_007525 PF12833 Helix-turn-helix domain HCV85_007530 PF01218 Coproporphyrinogen III oxidase HCV85_007535 PF01520 N-acetylmuramoyl-L-alanine amidase HCV85_007540 PF00583 Acetyltransferase (GNAT) family HCV85_007545 PF11143 Protein of unknown function (DUF2919) HCV85_007550 PF06572 Protein of unknown function (DUF1131) HCV85_007555 PF04261 Dyp-type peroxidase family HCV85_007570 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_007575 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_007580 PF00005 ABC transporter HCV85_007585 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_007590 PF13474 SnoaL-like domain HCV85_007595 PF00392 Bacterial regulatory proteins, gntR family HCV85_007595 PF00155 Aminotransferase class I and II HCV85_007600 PF08543 Phosphomethylpyrimidine kinase HCV85_007610 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCV85_007615 PF02896 PEP-utilising enzyme, TIM barrel domain HCV85_007615 PF00391 PEP-utilising enzyme, mobile domain HCV85_007615 PF05524 PEP-utilising enzyme, N-terminal HCV85_007620 PF00381 PTS HPr component phosphorylation site HCV85_007625 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_007635 PF04354 ZipA, C-terminal FtsZ-binding domain HCV85_007640 PF00533 BRCA1 C Terminus (BRCT) domain HCV85_007640 PF03120 NAD-dependent DNA ligase OB-fold domain HCV85_007640 PF01653 NAD-dependent DNA ligase adenylation domain HCV85_007640 PF12826 Helix-hairpin-helix motif HCV85_007640 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HCV85_007645 PF12843 Putative quorum-sensing-regulated virulence factor HCV85_007650 PF13593 SBF-like CPA transporter family (DUF4137) HCV85_007655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_007655 PF03466 LysR substrate binding domain HCV85_007680 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCV85_007685 PF07037 Putative transcription regulator (DUF1323) HCV85_007690 PF07037 Putative transcription regulator (DUF1323) HCV85_007705 PF00563 EAL domain HCV85_007705 PF05231 MASE1 HCV85_007710 PF07670 Nucleoside recognition HCV85_007710 PF07662 Na+ dependent nucleoside transporter C-terminus HCV85_007710 PF01773 Na+ dependent nucleoside transporter N-terminus HCV85_007715 PF01566 Natural resistance-associated macrophage protein HCV85_007720 PF10697 Protein of unknown function (DUF2502) HCV85_007725 PF00248 Aldo/keto reductase family HCV85_007730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_007730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_007730 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_007735 PF00654 Voltage gated chloride channel HCV85_007740 PF02685 Glucokinase HCV85_007745 PF04397 LytTr DNA-binding domain HCV85_007745 PF00072 Response regulator receiver domain HCV85_007750 PF06580 Histidine kinase HCV85_007750 PF07694 5TMR of 5TMR-LYT HCV85_007750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_007765 PF00155 Aminotransferase class I and II HCV85_007775 PF07690 Major Facilitator Superfamily HCV85_007780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCV85_007785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_007785 PF03466 LysR substrate binding domain HCV85_007805 PF01226 Formate/nitrite transporter HCV85_007810 PF04333 MlaA lipoprotein HCV85_007815 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HCV85_007820 PF04175 Protein of unknown function (DUF406) HCV85_007825 PF02803 Thiolase, C-terminal domain HCV85_007825 PF00108 Thiolase, N-terminal domain HCV85_007830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV85_007830 PF00378 Enoyl-CoA hydratase/isomerase HCV85_007830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV85_007835 PF00300 Histidine phosphatase superfamily (branch 1) HCV85_007840 PF01713 Smr domain HCV85_007845 PF05175 Methyltransferase small domain HCV85_007850 PF01264 Chorismate synthase HCV85_007855 PF03411 Penicillin-insensitive murein endopeptidase HCV85_007860 PF01925 Sulfite exporter TauE/SafE HCV85_007865 PF04315 Elongation factor P hydroxylase HCV85_007870 PF08891 YfcL protein HCV85_007875 PF01266 FAD dependent oxidoreductase HCV85_007875 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HCV85_007880 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV85_007880 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV85_007885 PF07690 Major Facilitator Superfamily HCV85_007895 PF11890 Domain of unknown function (DUF3410) HCV85_007895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV85_007895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_007900 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV85_007900 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV85_007905 PF01416 tRNA pseudouridine synthase HCV85_007910 PF09335 SNARE associated Golgi protein HCV85_007915 PF17848 Acetyl-coA carboxylase zinc finger domain HCV85_007915 PF01039 Carboxyl transferase domain HCV85_007920 PF08245 Mur ligase middle domain HCV85_007920 PF02875 Mur ligase family, glutamate ligase domain HCV85_007925 PF05036 Sporulation related domain HCV85_007930 PF02674 Colicin V production protein HCV85_007935 PF00156 Phosphoribosyl transferase domain HCV85_007940 PF02441 Flavoprotein HCV85_007950 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_007955 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_007960 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_007965 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_007970 PF00005 ABC transporter HCV85_007975 PF13302 Acetyltransferase (GNAT) domain HCV85_007985 PF08338 Domain of unknown function (DUF1731) HCV85_007985 PF01370 NAD dependent epimerase/dehydratase family HCV85_007990 PF02152 Dihydroneopterin aldolase HCV85_007995 PF00043 Glutathione S-transferase, C-terminal domain HCV85_007995 PF02798 Glutathione S-transferase, N-terminal domain HCV85_008000 PF14834 Glutathione S-transferase, C-terminal domain HCV85_008000 PF02798 Glutathione S-transferase, N-terminal domain HCV85_008005 PF12850 Calcineurin-like phosphoesterase superfamily domain HCV85_008010 PF00293 NUDIX domain HCV85_008015 PF01515 Phosphate acetyl/butaryl transferase HCV85_008015 PF07085 DRTGG domain HCV85_008020 PF00871 Acetokinase family HCV85_008025 PF04217 Protein of unknown function, DUF412 HCV85_008030 PF03887 YfbU domain HCV85_008035 PF13419 Haloacid dehalogenase-like hydrolase HCV85_008040 PF02080 TrkA-C domain HCV85_008040 PF03600 Citrate transporter HCV85_008050 PF00155 Aminotransferase class I and II HCV85_008055 PF03466 LysR substrate binding domain HCV85_008055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_008060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HCV85_008065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HCV85_008070 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HCV85_008070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HCV85_008080 PF10531 SLBB domain HCV85_008080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HCV85_008080 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HCV85_008085 PF01568 Molydopterin dinucleotide binding domain HCV85_008085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV85_008085 PF00384 Molybdopterin oxidoreductase HCV85_008085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HCV85_008090 PF00146 NADH dehydrogenase HCV85_008095 PF12838 4Fe-4S dicluster domain HCV85_008100 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HCV85_008105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HCV85_008110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HCV85_008110 PF00361 Proton-conducting membrane transporter HCV85_008115 PF00361 Proton-conducting membrane transporter HCV85_008120 PF00361 Proton-conducting membrane transporter HCV85_008125 PF12706 Beta-lactamase superfamily domain HCV85_008130 PF13673 Acetyltransferase (GNAT) domain HCV85_008135 PF00425 chorismate binding enzyme HCV85_008140 PF16582 Middle domain of thiamine pyrophosphate HCV85_008140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_008140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_008145 PF12697 Alpha/beta hydrolase family HCV85_008150 PF00378 Enoyl-CoA hydratase/isomerase HCV85_008155 PF13378 Enolase C-terminal domain-like HCV85_008160 PF13193 AMP-binding enzyme C-terminal domain HCV85_008160 PF00501 AMP-binding enzyme HCV85_008165 PF00293 NUDIX domain HCV85_008170 PF04754 Putative transposase, YhgA-like HCV85_008175 PF07437 YfaZ precursor HCV85_008180 PF00994 Probable molybdopterin binding domain HCV85_008185 PF09339 IclR helix-turn-helix domain HCV85_008185 PF01614 Bacterial transcriptional regulator HCV85_008190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV85_008190 PF13378 Enolase C-terminal domain-like HCV85_008195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV85_008195 PF13378 Enolase C-terminal domain-like HCV85_008200 PF07690 Major Facilitator Superfamily HCV85_008205 PF03328 HpcH/HpaI aldolase/citrate lyase family HCV85_008210 PF02754 Cysteine-rich domain HCV85_008210 PF13183 4Fe-4S dicluster domain HCV85_008215 PF00890 FAD binding domain HCV85_008220 PF01266 FAD dependent oxidoreductase HCV85_008220 PF04324 BFD-like [2Fe-2S] binding domain HCV85_008225 PF07690 Major Facilitator Superfamily HCV85_008230 PF03009 Glycerophosphoryl diester phosphodiesterase family HCV85_008235 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_008240 PF00268 Ribonucleotide reductase, small chain HCV85_008245 PF00317 Ribonucleotide reductase, all-alpha domain HCV85_008245 PF02867 Ribonucleotide reductase, barrel domain HCV85_008245 PF03477 ATP cone domain HCV85_008255 PF00521 DNA gyrase/topoisomerase IV, subunit A HCV85_008255 PF03989 DNA gyrase C-terminal domain, beta-propeller HCV85_008260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_008260 PF00512 His Kinase A (phospho-acceptor) domain HCV85_008260 PF09456 RcsC Alpha-Beta-Loop (ABL) HCV85_008260 PF00072 Response regulator receiver domain HCV85_008265 PF00072 Response regulator receiver domain HCV85_008265 PF00196 Bacterial regulatory proteins, luxR family HCV85_008270 PF16359 RcsD-ABL domain HCV85_008270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_008270 PF01627 Hpt domain HCV85_008275 PF00267 Gram-negative porin HCV85_008280 PF02424 ApbE family HCV85_008285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV85_008285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCV85_008285 PF12833 Helix-turn-helix domain HCV85_008285 PF02805 Metal binding domain of Ada HCV85_008290 PF13532 2OG-Fe(II) oxygenase superfamily HCV85_008295 PF00005 ABC transporter HCV85_008300 PF00571 CBS domain HCV85_008300 PF03448 MgtE intracellular N domain HCV85_008300 PF01769 Divalent cation transporter HCV85_008305 PF00916 Sulfate permease family HCV85_008305 PF01740 STAS domain HCV85_008310 PF06039 Malate:quinone oxidoreductase (Mqo) HCV85_008315 PF03974 Ecotin HCV85_008320 PF01594 AI-2E family transporter HCV85_008330 PF00884 Sulfatase HCV85_008330 PF11893 Domain of unknown function (DUF3413) HCV85_008335 PF07208 Protein of unknown function (DUF1414) HCV85_008340 PF04245 37-kD nucleoid-associated bacterial protein HCV85_008345 PF08220 DeoR-like helix-turn-helix domain HCV85_008345 PF00455 DeoR C terminal sensor domain HCV85_008350 PF00293 NUDIX domain HCV85_008355 PF00144 Beta-lactamase HCV85_008365 PF01386 Ribosomal L25p family HCV85_008370 PF04851 Type III restriction enzyme, res subunit HCV85_008370 PF00271 Helicase conserved C-terminal domain HCV85_008375 PF00849 RNA pseudouridylate synthase HCV85_008375 PF01479 S4 domain HCV85_008380 PF07690 Major Facilitator Superfamily HCV85_008385 PF13989 YejG-like protein HCV85_008390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_008390 PF00005 ABC transporter HCV85_008395 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_008395 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_008400 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_008405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_008410 PF00563 EAL domain HCV85_008410 PF12792 CSS motif domain associated with EAL HCV85_008415 PF00877 NlpC/P60 family HCV85_008420 PF01569 PAP2 superfamily HCV85_008425 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV85_008425 PF07683 Cobalamin synthesis protein cobW C-terminal domain HCV85_008430 PF08125 Mannitol dehydrogenase C-terminal domain HCV85_008430 PF01232 Mannitol dehydrogenase Rossmann domain HCV85_008435 PF03786 D-mannonate dehydratase (UxuA) HCV85_008440 PF08207 Elongation factor P (EF-P) KOW-like domain HCV85_008440 PF09285 Elongation factor P, C-terminal HCV85_008440 PF01132 Elongation factor P (EF-P) OB domain HCV85_008445 PF03692 Putative zinc- or iron-chelating domain HCV85_008455 PF07690 Major Facilitator Superfamily HCV85_008460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_008460 PF00381 PTS HPr component phosphorylation site HCV85_008465 PF00294 pfkB family carbohydrate kinase HCV85_008470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_008470 PF02378 Phosphotransferase system, EIIC HCV85_008475 PF01261 Xylose isomerase-like TIM barrel HCV85_008480 PF03601 Conserved hypothetical protein 698 HCV85_008485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_008485 PF03466 LysR substrate binding domain HCV85_008490 PF00324 Amino acid permease HCV85_008495 PF00593 TonB dependent receptor HCV85_008495 PF07715 TonB-dependent Receptor Plug Domain HCV85_008500 PF00756 Putative esterase HCV85_008505 PF01227 GTP cyclohydrolase I HCV85_008510 PF04235 Protein of unknown function (DUF418) HCV85_008515 PF00356 Bacterial regulatory proteins, lacI family HCV85_008520 PF13407 Periplasmic binding protein domain HCV85_008525 PF00005 ABC transporter HCV85_008530 PF02653 Branched-chain amino acid transport system / permease component HCV85_008535 PF02698 DUF218 domain HCV85_008540 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HCV85_008540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCV85_008545 PF04172 LrgB-like family HCV85_008550 PF03788 LrgA family HCV85_008555 PF01207 Dihydrouridine synthase (Dus) HCV85_008560 PF04966 Carbohydrate-selective porin, OprB family HCV85_008565 PF03123 CAT RNA binding domain HCV85_008565 PF00874 PRD domain HCV85_008570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCV85_008570 PF02378 Phosphotransferase system, EIIC HCV85_008570 PF00367 phosphotransferase system, EIIB HCV85_008575 PF00232 Glycosyl hydrolase family 1 HCV85_008580 PF02321 Outer membrane efflux protein HCV85_008585 PF09335 SNARE associated Golgi protein HCV85_008590 PF04893 Yip1 domain HCV85_008595 PF00768 D-alanyl-D-alanine carboxypeptidase HCV85_008605 PF09330 D-lactate dehydrogenase, membrane binding HCV85_008605 PF01565 FAD binding domain HCV85_008610 PF14310 Fibronectin type III-like domain HCV85_008610 PF00933 Glycosyl hydrolase family 3 N terminal domain HCV85_008610 PF01915 Glycosyl hydrolase family 3 C-terminal domain HCV85_008615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCV85_008620 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_008625 PF00005 ABC transporter HCV85_008630 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_008640 PF07694 5TMR of 5TMR-LYT HCV85_008640 PF06580 Histidine kinase HCV85_008645 PF04397 LytTr DNA-binding domain HCV85_008645 PF00072 Response regulator receiver domain HCV85_008650 PF07308 Protein of unknown function (DUF1456) HCV85_008655 PF09334 tRNA synthetases class I (M) HCV85_008655 PF01588 Putative tRNA binding domain HCV85_008660 PF10609 NUBPL iron-transfer P-loop NTPase HCV85_008670 PF11776 Nickel/cobalt transporter regulator HCV85_008675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_008675 PF03466 LysR substrate binding domain HCV85_008680 PF00860 Permease family HCV85_008685 PF01979 Amidohydrolase family HCV85_008685 PF13382 Adenine deaminase C-terminal domain HCV85_008690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_008690 PF03466 LysR substrate binding domain HCV85_008700 PF02110 Hydroxyethylthiazole kinase family HCV85_008705 PF08543 Phosphomethylpyrimidine kinase HCV85_008710 PF01791 DeoC/LacD family aldolase HCV85_008715 PF07690 Major Facilitator Superfamily HCV85_008720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_008720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_008725 PF00106 short chain dehydrogenase HCV85_008730 PF00356 Bacterial regulatory proteins, lacI family HCV85_008735 PF04198 Putative sugar-binding domain HCV85_008740 PF08125 Mannitol dehydrogenase C-terminal domain HCV85_008740 PF01232 Mannitol dehydrogenase Rossmann domain HCV85_008745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_008745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_008750 PF07690 Major Facilitator Superfamily HCV85_008755 PF13419 Haloacid dehalogenase-like hydrolase HCV85_008760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV85_008760 PF13378 Enolase C-terminal domain-like HCV85_008765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_008770 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_008775 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_008775 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_008780 PF00005 ABC transporter HCV85_008780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_008785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_008785 PF00005 ABC transporter HCV85_008790 PF00781 Diacylglycerol kinase catalytic domain HCV85_008795 PF01136 Peptidase family U32 HCV85_008795 PF16325 Peptidase family U32 C-terminal domain HCV85_008800 PF00486 Transcriptional regulatory protein, C terminal HCV85_008800 PF00072 Response regulator receiver domain HCV85_008805 PF00672 HAMP domain HCV85_008805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_008805 PF00512 His Kinase A (phospho-acceptor) domain HCV85_008810 PF07690 Major Facilitator Superfamily HCV85_008815 PF00873 AcrB/AcrD/AcrF family HCV85_008820 PF00873 AcrB/AcrD/AcrF family HCV85_008825 PF13533 Biotin-lipoyl like HCV85_008830 PF00375 Sodium:dicarboxylate symporter family HCV85_008845 PF00486 Transcriptional regulatory protein, C terminal HCV85_008845 PF00072 Response regulator receiver domain HCV85_008850 PF00672 HAMP domain HCV85_008850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_008850 PF00512 His Kinase A (phospho-acceptor) domain HCV85_008850 PF13426 PAS domain HCV85_008855 PF00012 Hsp70 protein HCV85_008860 PF00730 HhH-GPD superfamily base excision DNA repair protein HCV85_008860 PF06029 AlkA N-terminal domain HCV85_008865 PF00485 Phosphoribulokinase / Uridine kinase family HCV85_008870 PF00692 dUTPase HCV85_008875 PF05170 AsmA family HCV85_008880 PF00571 CBS domain HCV85_008880 PF03471 Transporter associated domain HCV85_008880 PF03741 Integral membrane protein TerC family HCV85_008885 PF00483 Nucleotidyl transferase HCV85_008890 PF01569 PAP2 superfamily HCV85_008900 PF14052 Capsule assembly protein Wzi HCV85_008905 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HCV85_008905 PF10531 SLBB domain HCV85_008905 PF02563 Polysaccharide biosynthesis/export protein HCV85_008910 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCV85_008915 PF13614 AAA domain HCV85_008915 PF13807 G-rich domain on putative tyrosine kinase HCV85_008915 PF02706 Chain length determinant protein HCV85_008920 PF02397 Bacterial sugar transferase HCV85_008925 PF00535 Glycosyl transferase family 2 HCV85_008930 PF00535 Glycosyl transferase family 2 HCV85_008940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCV85_008940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV85_008945 PF16363 GDP-mannose 4,6 dehydratase HCV85_008950 PF00483 Nucleotidyl transferase HCV85_008955 PF04321 RmlD substrate binding domain HCV85_008960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HCV85_008965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCV85_008965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCV85_008965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCV85_008970 PF01370 NAD dependent epimerase/dehydratase family HCV85_008975 PF01943 Polysaccharide biosynthesis protein HCV85_009000 PF01370 NAD dependent epimerase/dehydratase family HCV85_009005 PF01061 ABC-2 type transporter HCV85_009010 PF00005 ABC transporter HCV85_009020 PF03275 UDP-galactopyranose mutase HCV85_009030 PF00534 Glycosyl transferases group 1 HCV85_009030 PF13439 Glycosyltransferase Family 4 HCV85_009035 PF00535 Glycosyl transferase family 2 HCV85_009035 PF01501 Glycosyl transferase family 8 HCV85_009045 PF00535 Glycosyl transferase family 2 HCV85_009055 PF01502 Phosphoribosyl-AMP cyclohydrolase HCV85_009055 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HCV85_009060 PF00977 Histidine biosynthesis protein HCV85_009065 PF00977 Histidine biosynthesis protein HCV85_009070 PF00117 Glutamine amidotransferase class-I HCV85_009075 PF08645 Polynucleotide kinase 3 phosphatase HCV85_009075 PF00475 Imidazoleglycerol-phosphate dehydratase HCV85_009080 PF00155 Aminotransferase class I and II HCV85_009085 PF00815 Histidinol dehydrogenase HCV85_009090 PF01634 ATP phosphoribosyltransferase HCV85_009090 PF08029 HisG, C-terminal domain HCV85_009100 PF01370 NAD dependent epimerase/dehydratase family HCV85_009105 PF03466 LysR substrate binding domain HCV85_009105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_009115 PF13520 Amino acid permease HCV85_009120 PF01022 Bacterial regulatory protein, arsR family HCV85_009125 PF14492 Elongation Factor G, domain II HCV85_009125 PF00009 Elongation factor Tu GTP binding domain HCV85_009125 PF00679 Elongation factor G C-terminus HCV85_009125 PF03144 Elongation factor Tu domain 2 HCV85_009125 PF03764 Elongation factor G, domain IV HCV85_009135 PF08411 Exonuclease C-terminal HCV85_009135 PF00929 Exonuclease HCV85_009140 PF07943 Penicillin-binding protein 5, C-terminal domain HCV85_009140 PF00768 D-alanyl-D-alanine carboxypeptidase HCV85_009145 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HCV85_009155 PF00717 Peptidase S24-like HCV85_009165 PF00576 HIUase/Transthyretin family HCV85_009180 PF00285 Citrate synthase, C-terminal domain HCV85_009195 PF16970 Type-1 fimbrial protein, A HCV85_009200 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV85_009200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV85_009205 PF00577 Outer membrane usher protein HCV85_009205 PF13954 PapC N-terminal domain HCV85_009205 PF13953 PapC C-terminal domain HCV85_009220 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV85_009230 PF18500 CadC C-terminal domain 1 HCV85_009230 PF00486 Transcriptional regulatory protein, C terminal HCV85_009235 PF13520 Amino acid permease HCV85_009240 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HCV85_009240 PF01276 Orn/Lys/Arg decarboxylase, major domain HCV85_009240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCV85_009245 PF00854 POT family HCV85_009250 PF01336 OB-fold nucleic acid binding domain HCV85_009250 PF00152 tRNA synthetases class II (D, K and N) HCV85_009260 PF01261 Xylose isomerase-like TIM barrel HCV85_009265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_009265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_009270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_009270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_009275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_009275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_009280 PF00356 Bacterial regulatory proteins, lacI family HCV85_009285 PF13407 Periplasmic binding protein domain HCV85_009290 PF00005 ABC transporter HCV85_009295 PF02653 Branched-chain amino acid transport system / permease component HCV85_009305 PF13407 Periplasmic binding protein domain HCV85_009305 PF00356 Bacterial regulatory proteins, lacI family HCV85_009310 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCV85_009310 PF08244 Glycosyl hydrolases family 32 C terminal HCV85_009315 PF00367 phosphotransferase system, EIIB HCV85_009315 PF02378 Phosphotransferase system, EIIC HCV85_009320 PF11471 Maltoporin periplasmic N-terminal extension HCV85_009320 PF02264 LamB porin HCV85_009325 PF00294 pfkB family carbohydrate kinase HCV85_009335 PF11742 Protein of unknown function (DUF3302) HCV85_009340 PF00529 HlyD membrane-fusion protein of T1SS HCV85_009340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_009345 PF00005 ABC transporter HCV85_009350 PF01032 FecCD transport family HCV85_009380 PF07687 Peptidase dimerisation domain HCV85_009380 PF01546 Peptidase family M20/M25/M40 HCV85_009385 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_009390 PF00248 Aldo/keto reductase family HCV85_009395 PF10703 MoaF N-terminal domain HCV85_009395 PF17409 MoaF C-terminal domain HCV85_009405 PF00884 Sulfatase HCV85_009410 PF04055 Radical SAM superfamily HCV85_009415 PF00196 Bacterial regulatory proteins, luxR family HCV85_009425 PF00850 Histone deacetylase domain HCV85_009435 PF13520 Amino acid permease HCV85_009445 PF01266 FAD dependent oxidoreductase HCV85_009450 PF00171 Aldehyde dehydrogenase family HCV85_009460 PF00593 TonB dependent receptor HCV85_009460 PF07715 TonB-dependent Receptor Plug Domain HCV85_009465 PF00324 Amino acid permease HCV85_009470 PF03825 Nucleoside H+ symporter HCV85_009480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_009480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_009490 PF00196 Bacterial regulatory proteins, luxR family HCV85_009505 PF16967 E-set like domain HCV85_009505 PF15976 CS1-pili formation C-terminal HCV85_009510 PF18649 EcpB C-terminal domain HCV85_009515 PF16449 Fimbrillin MatB HCV85_009530 PF00356 Bacterial regulatory proteins, lacI family HCV85_009535 PF00924 Mechanosensitive ion channel HCV85_009540 PF07690 Major Facilitator Superfamily HCV85_009555 PF00874 PRD domain HCV85_009555 PF00158 Sigma-54 interaction domain HCV85_009555 PF03610 PTS system fructose IIA component HCV85_009560 PF01380 SIS domain HCV85_009565 PF01380 SIS domain HCV85_009570 PF03613 PTS system mannose/fructose/sorbose family IID component HCV85_009580 PF03830 PTS system sorbose subfamily IIB component HCV85_009590 PF00881 Nitroreductase family HCV85_009595 PF04237 YjbR HCV85_009600 PF00440 Bacterial regulatory proteins, tetR family HCV85_009605 PF12706 Beta-lactamase superfamily domain HCV85_009610 PF12833 Helix-turn-helix domain HCV85_009615 PF06643 Protein of unknown function (DUF1158) HCV85_009620 PF00689 Cation transporting ATPase, C-terminus HCV85_009620 PF00690 Cation transporter/ATPase, N-terminus HCV85_009625 PF13533 Biotin-lipoyl like HCV85_009630 PF00873 AcrB/AcrD/AcrF family HCV85_009640 PF09992 Phosphodiester glycosidase HCV85_009645 PF04107 Glutamate-cysteine ligase family 2(GCS2) HCV85_009650 PF00892 EamA-like transporter family HCV85_009655 PF00155 Aminotransferase class I and II HCV85_009660 PF00155 Aminotransferase class I and II HCV85_009660 PF00392 Bacterial regulatory proteins, gntR family HCV85_009665 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_009665 PF01464 Transglycosylase SLT domain HCV85_009670 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_009675 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_009680 PF00005 ABC transporter HCV85_009685 PF00106 short chain dehydrogenase HCV85_009690 PF00202 Aminotransferase class-III HCV85_009695 PF00005 ABC transporter HCV85_009695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_009700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_009700 PF00005 ABC transporter HCV85_009705 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_009705 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_009710 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_009715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_009725 PF00732 GMC oxidoreductase HCV85_009725 PF05199 GMC oxidoreductase HCV85_009730 PF00171 Aldehyde dehydrogenase family HCV85_009735 PF13977 BetI-type transcriptional repressor, C-terminal HCV85_009735 PF00440 Bacterial regulatory proteins, tetR family HCV85_009740 PF02028 BCCT, betaine/carnitine/choline family transporter HCV85_009750 PF00924 Mechanosensitive ion channel HCV85_009755 PF03466 LysR substrate binding domain HCV85_009755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_009775 PF02653 Branched-chain amino acid transport system / permease component HCV85_009780 PF00005 ABC transporter HCV85_009790 PF13407 Periplasmic binding protein domain HCV85_009795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_009795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_009800 PF04198 Putative sugar-binding domain HCV85_009800 PF00325 Bacterial regulatory proteins, crp family HCV85_009805 PF00456 Transketolase, thiamine diphosphate binding domain HCV85_009810 PF02780 Transketolase, C-terminal domain HCV85_009810 PF02779 Transketolase, pyrimidine binding domain HCV85_009815 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HCV85_009815 PF01648 4'-phosphopantetheinyl transferase superfamily HCV85_009820 PF07715 TonB-dependent Receptor Plug Domain HCV85_009820 PF00593 TonB dependent receptor HCV85_009825 PF00756 Putative esterase HCV85_009825 PF11806 Domain of unknown function (DUF3327) HCV85_009830 PF03621 MbtH-like protein HCV85_009835 PF00975 Thioesterase domain HCV85_009835 PF00501 AMP-binding enzyme HCV85_009835 PF13193 AMP-binding enzyme C-terminal domain HCV85_009835 PF00668 Condensation domain HCV85_009835 PF00550 Phosphopantetheine attachment site HCV85_009840 PF00005 ABC transporter HCV85_009845 PF01032 FecCD transport family HCV85_009850 PF01032 FecCD transport family HCV85_009855 PF05977 Transmembrane secretion effector HCV85_009860 PF01497 Periplasmic binding protein HCV85_009865 PF00425 chorismate binding enzyme HCV85_009870 PF13193 AMP-binding enzyme C-terminal domain HCV85_009870 PF00501 AMP-binding enzyme HCV85_009875 PF00857 Isochorismatase family HCV85_009875 PF00550 Phosphopantetheine attachment site HCV85_009885 PF03061 Thioesterase superfamily HCV85_009890 PF02554 Carbon starvation protein CstA HCV85_009890 PF13722 5TM C-terminal transporter carbon starvation CstA HCV85_009895 PF04328 Selenoprotein, putative HCV85_009915 PF00465 Iron-containing alcohol dehydrogenase HCV85_009920 PF00005 ABC transporter HCV85_009925 PF02653 Branched-chain amino acid transport system / permease component HCV85_009940 PF01636 Phosphotransferase enzyme family HCV85_009945 PF01008 Initiation factor 2 subunit family HCV85_009950 PF00328 Histidine phosphatase superfamily (branch 2) HCV85_009955 PF07690 Major Facilitator Superfamily HCV85_009960 PF00459 Inositol monophosphatase family HCV85_009965 PF00356 Bacterial regulatory proteins, lacI family HCV85_009970 PF07969 Amidohydrolase family HCV85_009980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCV85_009985 PF00596 Class II Aldolase and Adducin N-terminal domain HCV85_009990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_009990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_009995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV85_009995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_010005 PF02653 Branched-chain amino acid transport system / permease component HCV85_010010 PF02653 Branched-chain amino acid transport system / permease component HCV85_010015 PF00005 ABC transporter HCV85_010025 PF00384 Molybdopterin oxidoreductase HCV85_010025 PF01568 Molydopterin dinucleotide binding domain HCV85_010030 PF03079 ARD/ARD' family HCV85_010040 PF00155 Aminotransferase class I and II HCV85_010045 PF02195 ParB-like nuclease domain HCV85_010050 PF11922 Domain of unknown function (DUF3440) HCV85_010050 PF01507 Phosphoadenosine phosphosulfate reductase family HCV85_010055 PF03466 LysR substrate binding domain HCV85_010055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_010060 PF13098 Thioredoxin-like domain HCV85_010065 PF10417 C-terminal domain of 1-Cys peroxiredoxin HCV85_010065 PF00578 AhpC/TSA family HCV85_010070 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_010070 PF13192 Thioredoxin domain HCV85_010075 PF00582 Universal stress protein family HCV85_010080 PF01272 Transcription elongation factor, GreA/GreB, C-term HCV85_010080 PF14760 Rnk N-terminus HCV85_010085 PF00445 Ribonuclease T2 family HCV85_010090 PF03606 C4-dicarboxylate anaerobic carrier HCV85_010095 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP HCV85_010100 PF00313 'Cold-shock' DNA-binding domain HCV85_010105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HCV85_010110 PF00795 Carbon-nitrogen hydrolase HCV85_010115 PF02416 mttA/Hcf106 family HCV85_010120 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HCV85_010120 PF04055 Radical SAM superfamily HCV85_010125 PF03466 LysR substrate binding domain HCV85_010125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_010130 PF03099 Biotin/lipoate A/B protein ligase family HCV85_010135 PF04359 Protein of unknown function (DUF493) HCV85_010140 PF07943 Penicillin-binding protein 5, C-terminal domain HCV85_010140 PF00768 D-alanyl-D-alanine carboxypeptidase HCV85_010145 PF05036 Sporulation related domain HCV85_010145 PF03330 Lytic transglycolase HCV85_010150 PF01098 Cell cycle protein HCV85_010155 PF00905 Penicillin binding protein transpeptidase domain HCV85_010155 PF03717 Penicillin-binding Protein dimerisation domain HCV85_010160 PF02590 Predicted SPOUT methyltransferase HCV85_010170 PF00300 Histidine phosphatase superfamily (branch 1) HCV85_010175 PF01467 Cytidylyltransferase-like HCV85_010180 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HCV85_010180 PF06144 DNA polymerase III, delta subunit HCV85_010185 PF04390 Lipopolysaccharide-assembly HCV85_010190 PF08264 Anticodon-binding domain of tRNA HCV85_010190 PF00133 tRNA synthetases class I (I, L, M and V) HCV85_010190 PF13603 Leucyl-tRNA synthetase, Domain 2 HCV85_010195 PF07295 Zinc-ribbon containing domain HCV85_010200 PF13332 Hemagglutinin repeat HCV85_010200 PF04829 Pre-toxin domain with VENN motif HCV85_010200 PF05860 haemagglutination activity domain HCV85_010200 PF05594 Haemagluttinin repeat HCV85_010200 PF14436 Bacterial EndoU nuclease HCV85_010205 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HCV85_010205 PF17287 POTRA domain HCV85_010205 PF08479 POTRA domain, ShlB-type HCV85_010210 PF00005 ABC transporter HCV85_010215 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_010220 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_010225 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_010230 PF00795 Carbon-nitrogen hydrolase HCV85_010235 PF03471 Transporter associated domain HCV85_010235 PF00571 CBS domain HCV85_010240 PF02130 Uncharacterized protein family UPF0054 HCV85_010245 PF02562 PhoH-like protein HCV85_010250 PF04055 Radical SAM superfamily HCV85_010250 PF01938 TRAM domain HCV85_010250 PF00919 Uncharacterized protein family UPF0004 HCV85_010255 PF01494 FAD binding domain HCV85_010295 PF13537 Glutamine amidotransferase domain HCV85_010295 PF00733 Asparagine synthase HCV85_010300 PF13344 Haloacid dehalogenase-like hydrolase HCV85_010305 PF01047 MarR family HCV85_010305 PF00480 ROK family HCV85_010310 PF01979 Amidohydrolase family HCV85_010315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCV85_010320 PF00367 phosphotransferase system, EIIB HCV85_010320 PF02378 Phosphotransferase system, EIIC HCV85_010320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCV85_010325 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HCV85_010325 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCV85_010335 PF03573 outer membrane porin, OprD family HCV85_010340 PF13982 YbfN-like lipoprotein HCV85_010350 PF01475 Ferric uptake regulator family HCV85_010355 PF00258 Flavodoxin HCV85_010360 PF01402 Ribbon-helix-helix protein, copG family HCV85_010365 PF12697 Alpha/beta hydrolase family HCV85_010370 PF03925 SeqA protein C-terminal domain HCV85_010370 PF17206 SeqA protein N-terminal domain HCV85_010375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCV85_010375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCV85_010375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCV85_010375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCV85_010385 PF00072 Response regulator receiver domain HCV85_010385 PF00486 Transcriptional regulatory protein, C terminal HCV85_010390 PF13492 GAF domain HCV85_010390 PF00512 His Kinase A (phospho-acceptor) domain HCV85_010390 PF02702 Osmosensitive K+ channel His kinase sensor domain HCV85_010390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_010390 PF13493 Domain of unknown function (DUF4118) HCV85_010395 PF02669 K+-transporting ATPase, c chain HCV85_010405 PF03814 Potassium-transporting ATPase A subunit HCV85_010410 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) HCV85_010415 PF10725 Protein of unknown function (DUF2517) HCV85_010420 PF00875 DNA photolyase HCV85_010420 PF03441 FAD binding domain of DNA photolyase HCV85_010425 PF00854 POT family HCV85_010430 PF01784 NIF3 (NGG1p interacting factor 3) HCV85_010435 PF02682 Carboxyltransferase domain, subdomain C and D HCV85_010440 PF02626 Carboxyltransferase domain, subdomain A and B HCV85_010445 PF03746 LamB/YcsF family HCV85_010460 PF01470 Pyroglutamyl peptidase HCV85_010465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HCV85_010465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HCV85_010465 PF06827 Zinc finger found in FPG and IleRS HCV85_010470 PF00285 Citrate synthase, C-terminal domain HCV85_010475 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HCV85_010480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HCV85_010485 PF00890 FAD binding domain HCV85_010485 PF02910 Fumarate reductase flavoprotein C-term HCV85_010490 PF13085 2Fe-2S iron-sulfur cluster binding domain HCV85_010495 PF00676 Dehydrogenase E1 component HCV85_010495 PF16078 2-oxoglutarate dehydrogenase N-terminus HCV85_010495 PF02779 Transketolase, pyrimidine binding domain HCV85_010495 PF16870 2-oxoglutarate dehydrogenase C-terminal HCV85_010500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCV85_010500 PF00364 Biotin-requiring enzyme HCV85_010500 PF02817 e3 binding domain HCV85_010505 PF00549 CoA-ligase HCV85_010505 PF08442 ATP-grasp domain HCV85_010510 PF00549 CoA-ligase HCV85_010510 PF02629 CoA binding domain HCV85_010515 PF01654 Cytochrome bd terminal oxidase subunit I HCV85_010520 PF02322 Cytochrome bd terminal oxidase subunit II HCV85_010525 PF08173 Membrane bound YbgT-like protein HCV85_010530 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HCV85_010535 PF03061 Thioesterase superfamily HCV85_010540 PF01618 MotA/TolQ/ExbB proton channel family HCV85_010545 PF02472 Biopolymer transport protein ExbD/TolR HCV85_010550 PF06519 TolA C-terminal HCV85_010555 PF07676 WD40-like Beta Propeller Repeat HCV85_010555 PF04052 TolB amino-terminal domain HCV85_010560 PF00691 OmpA family HCV85_010565 PF16331 TolA binding protein trimerisation HCV85_010565 PF13174 Tetratricopeptide repeat HCV85_010610 PF02445 Quinolinate synthetase A protein HCV85_010615 PF04973 Nicotinamide mononucleotide transporter HCV85_010620 PF01545 Cation efflux family HCV85_010625 PF13985 YbgS-like protein HCV85_010630 PF00793 DAHP synthetase I family HCV85_010635 PF00300 Histidine phosphatase superfamily (branch 1) HCV85_010640 PF01263 Aldose 1-epimerase HCV85_010645 PF00288 GHMP kinases N terminal domain HCV85_010645 PF10509 Galactokinase galactose-binding signature HCV85_010645 PF08544 GHMP kinases C terminal HCV85_010650 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HCV85_010650 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HCV85_010655 PF16363 GDP-mannose 4,6 dehydratase HCV85_010660 PF00005 ABC transporter HCV85_010665 PF03459 TOBE domain HCV85_010665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_010670 PF10766 Multidrug efflux pump-associated protein AcrZ HCV85_010680 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_010685 PF03459 TOBE domain HCV85_010685 PF00005 ABC transporter HCV85_010695 PF10282 Lactonase, 7-bladed beta-propeller HCV85_010700 PF10798 Biofilm development protein YmgB/AriR HCV85_010710 PF10798 Biofilm development protein YmgB/AriR HCV85_010715 PF00563 EAL domain HCV85_010715 PF04940 Sensors of blue-light using FAD HCV85_010720 PF13411 MerR HTH family regulatory protein HCV85_010755 PF01095 Pectinesterase HCV85_010760 PF01979 Amidohydrolase family HCV85_010765 PF00491 Arginase family HCV85_010770 PF07702 UTRA domain HCV85_010770 PF00392 Bacterial regulatory proteins, gntR family HCV85_010780 PF01175 Urocanase Rossmann-like domain HCV85_010780 PF17392 Urocanase C-terminal domain HCV85_010780 PF17391 Urocanase N-terminal domain HCV85_010785 PF00221 Aromatic amino acid lyase HCV85_010790 PF00324 Amino acid permease HCV85_010795 PF01161 Phosphatidylethanolamine-binding protein HCV85_010800 PF00202 Aminotransferase class-III HCV85_010805 PF04055 Radical SAM superfamily HCV85_010805 PF06968 Biotin and Thiamin Synthesis associated domain HCV85_010810 PF00155 Aminotransferase class I and II HCV85_010815 PF08241 Methyltransferase domain HCV85_010825 PF00005 ABC transporter HCV85_010835 PF00271 Helicase conserved C-terminal domain HCV85_010835 PF17757 UvrB interaction domain HCV85_010835 PF12344 Ultra-violet resistance protein B HCV85_010835 PF04851 Type III restriction enzyme, res subunit HCV85_010835 PF02151 UvrB/uvrC motif HCV85_010840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_010840 PF00512 His Kinase A (phospho-acceptor) domain HCV85_010845 PF00486 Transcriptional regulatory protein, C terminal HCV85_010845 PF00072 Response regulator receiver domain HCV85_010850 PF00884 Sulfatase HCV85_010850 PF08019 Phosphoethanolamine transferase EptA/EptB HCV85_010855 PF01933 Uncharacterised protein family UPF0052 HCV85_010860 PF06463 Molybdenum Cofactor Synthesis C HCV85_010860 PF04055 Radical SAM superfamily HCV85_010865 PF00994 Probable molybdopterin binding domain HCV85_010870 PF01967 MoaC family HCV85_010875 PF02597 ThiS family HCV85_010880 PF02391 MoaE protein HCV85_010885 PF01027 Inhibitor of apoptosis-promoting Bax1 HCV85_010890 PF03706 Lysylphosphatidylglycerol synthase TM region HCV85_010895 PF13091 PLD-like domain HCV85_010900 PF03372 Endonuclease/Exonuclease/phosphatase family HCV85_010905 PF11076 Putative inner membrane protein YbhQ HCV85_010920 PF00005 ABC transporter HCV85_010925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_010930 PF09209 Tetracyclin repressor-like, C-terminal domain HCV85_010930 PF00440 Bacterial regulatory proteins, tetR family HCV85_010935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_010935 PF03466 LysR substrate binding domain HCV85_010945 PF07690 Major Facilitator Superfamily HCV85_010955 PF00456 Transketolase, thiamine diphosphate binding domain HCV85_010960 PF02780 Transketolase, C-terminal domain HCV85_010960 PF02779 Transketolase, pyrimidine binding domain HCV85_010965 PF00271 Helicase conserved C-terminal domain HCV85_010965 PF00270 DEAD/DEAH box helicase HCV85_010970 PF06733 DEAD_2 HCV85_010970 PF00270 DEAD/DEAH box helicase HCV85_010970 PF13307 Helicase C-terminal domain HCV85_010975 PF02885 Glycosyl transferase family, helical bundle domain HCV85_010980 PF07338 Protein of unknown function (DUF1471) HCV85_010985 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCV85_010995 PF01613 Flavin reductase like domain HCV85_011000 PF05971 RNA methyltransferase HCV85_011005 PF00924 Mechanosensitive ion channel HCV85_011010 PF00005 ABC transporter HCV85_011015 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011020 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_011025 PF00210 Ferritin-like domain HCV85_011030 PF00892 EamA-like transporter family HCV85_011035 PF13505 Outer membrane protein beta-barrel domain HCV85_011040 PF00884 Sulfatase HCV85_011050 PF02742 Iron dependent repressor, metal binding and dimerisation domain HCV85_011050 PF01325 Iron dependent repressor, N-terminal DNA binding domain HCV85_011055 PF03600 Citrate transporter HCV85_011060 PF00232 Glycosyl hydrolase family 1 HCV85_011065 PF07702 UTRA domain HCV85_011065 PF00392 Bacterial regulatory proteins, gntR family HCV85_011070 PF03734 L,D-transpeptidase catalytic domain HCV85_011070 PF17969 L,D-transpeptidase C-terminal domain HCV85_011075 PF13350 Tyrosine phosphatase family HCV85_011080 PF12848 ABC transporter HCV85_011080 PF00005 ABC transporter HCV85_011085 PF16338 Domain of unknown function (DUF4968) HCV85_011085 PF17137 Domain of unknown function (DUF5110) HCV85_011085 PF13802 Galactose mutarotase-like HCV85_011085 PF01055 Glycosyl hydrolases family 31 HCV85_011090 PF07690 Major Facilitator Superfamily HCV85_011095 PF00356 Bacterial regulatory proteins, lacI family HCV85_011100 PF07350 Protein of unknown function (DUF1479) HCV85_011110 PF02901 Pyruvate formate lyase-like HCV85_011110 PF01228 Glycine radical HCV85_011115 PF04055 Radical SAM superfamily HCV85_011120 PF00899 ThiF family HCV85_011125 PF03453 MoeA N-terminal region (domain I and II) HCV85_011125 PF03454 MoeA C-terminal region (domain IV) HCV85_011125 PF00994 Probable molybdopterin binding domain HCV85_011130 PF01112 Asparaginase HCV85_011135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_011135 PF00005 ABC transporter HCV85_011140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_011145 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011150 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011150 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_011155 PF00919 Uncharacterized protein family UPF0004 HCV85_011155 PF18693 TRAM domain HCV85_011155 PF04055 Radical SAM superfamily HCV85_011160 PF01306 LacY proton/sugar symporter HCV85_011165 PF10799 Biofilm formation protein (YliH/bssR) HCV85_011170 PF07995 Glucose / Sorbosone dehydrogenase HCV85_011175 PF00043 Glutathione S-transferase, C-terminal domain HCV85_011175 PF13417 Glutathione S-transferase, N-terminal domain HCV85_011185 PF07943 Penicillin-binding protein 5, C-terminal domain HCV85_011185 PF00768 D-alanyl-D-alanine carboxypeptidase HCV85_011190 PF08220 DeoR-like helix-turn-helix domain HCV85_011190 PF00455 DeoR C terminal sensor domain HCV85_011195 PF01569 PAP2 superfamily HCV85_011200 PF07690 Major Facilitator Superfamily HCV85_011210 PF07690 Major Facilitator Superfamily HCV85_011215 PF00440 Bacterial regulatory proteins, tetR family HCV85_011220 PF02899 Phage integrase, N-terminal SAM-like domain HCV85_011220 PF00589 Phage integrase family HCV85_011225 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HCV85_011235 PF16452 Bacteriophage CI repressor C-terminal domain HCV85_011235 PF07022 Bacteriophage CI repressor helix-turn-helix domain HCV85_011245 PF06892 Phage regulatory protein CII (CP76) HCV85_011255 PF17282 Family of unknown function (DUF5347) HCV85_011265 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCV85_011270 PF02086 D12 class N6 adenine-specific DNA methyltransferase HCV85_011275 PF05840 Bacteriophage replication gene A protein (GPA) HCV85_011285 PF06183 DinI-like family HCV85_011420 PF04984 Phage tail sheath protein subtilisin-like domain HCV85_011420 PF17482 Phage tail sheath C-terminal domain HCV85_011455 PF04606 Ogr/Delta-like zinc finger HCV85_011460 PF02080 TrkA-C domain HCV85_011460 PF06826 Predicted Permease Membrane Region HCV85_011465 PF11045 Putative inner membrane protein of Enterobacteriaceae HCV85_011470 PF00462 Glutaredoxin HCV85_011475 PF07214 Protein of unknown function (DUF1418) HCV85_011485 PF18030 RimK PreATP-grasp domain HCV85_011485 PF08443 RimK-like ATP-grasp domain HCV85_011490 PF10722 Putative bacterial sensory transduction regulator HCV85_011495 PF13416 Bacterial extracellular solute-binding protein HCV85_011500 PF08402 TOBE domain HCV85_011500 PF00005 ABC transporter HCV85_011505 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011510 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011515 PF10767 Protein of unknown function (DUF2593) HCV85_011520 PF05958 tRNA (Uracil-5-)-methyltransferase HCV85_011525 PF00486 Transcriptional regulatory protein, C terminal HCV85_011525 PF00072 Response regulator receiver domain HCV85_011530 PF16736 Single Cache-like HCV85_011530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_011530 PF00989 PAS fold HCV85_011530 PF00512 His Kinase A (phospho-acceptor) domain HCV85_011535 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_011540 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011545 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011550 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_011555 PF00005 ABC transporter HCV85_011560 PF12883 Protein of unknown function (DUF3828) HCV85_011565 PF00360 Phytochrome region HCV85_011565 PF00990 Diguanylate cyclase, GGDEF domain HCV85_011565 PF01590 GAF domain HCV85_011565 PF00563 EAL domain HCV85_011570 PF01510 N-acetylmuramoyl-L-alanine amidase HCV85_011575 PF01370 NAD dependent epimerase/dehydratase family HCV85_011580 PF13460 NAD(P)H-binding HCV85_011580 PF11066 Protein of unknown function (DUF2867) HCV85_011585 PF01212 Beta-eliminating lyase HCV85_011590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_011590 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_011590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_011600 PF00175 Oxidoreductase NAD-binding domain HCV85_011600 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_011600 PF00970 Oxidoreductase FAD-binding domain HCV85_011605 PF03063 Prismane/CO dehydrogenase family HCV85_011610 PF03956 Lysine exporter LysO HCV85_011615 PF00230 Major intrinsic protein HCV85_011620 PF11398 Protein of unknown function (DUF2813) HCV85_011625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_011630 PF02687 FtsX-like permease family HCV85_011630 PF00005 ABC transporter HCV85_011630 PF12704 MacB-like periplasmic core domain HCV85_011635 PF00313 'Cold-shock' DNA-binding domain HCV85_011640 PF02617 ATP-dependent Clp protease adaptor protein ClpS HCV85_011645 PF17871 AAA lid domain HCV85_011645 PF07724 AAA domain (Cdc48 subfamily) HCV85_011645 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_011645 PF10431 C-terminal, D2-small domain, of ClpB protein HCV85_011645 PF02861 Clp amino terminal domain, pathogenicity island component HCV85_011650 PF01176 Translation initiation factor 1A / IF-1 HCV85_011655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HCV85_011660 PF00664 ABC transporter transmembrane region HCV85_011660 PF00005 ABC transporter HCV85_011665 PF00005 ABC transporter HCV85_011665 PF00664 ABC transporter transmembrane region HCV85_011670 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_011675 PF01037 Lrp/AsnC ligand binding domain HCV85_011680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HCV85_011680 PF09397 Ftsk gamma domain HCV85_011680 PF01580 FtsK/SpoIIIE family HCV85_011680 PF17854 FtsK alpha domain HCV85_011685 PF03548 Outer membrane lipoprotein carrier protein LolA HCV85_011690 PF12002 MgsA AAA+ ATPase C terminal HCV85_011690 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_011690 PF16193 AAA C-terminal domain HCV85_011695 PF02403 Seryl-tRNA synthetase N-terminal domain HCV85_011695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCV85_011700 PF01568 Molydopterin dinucleotide binding domain HCV85_011700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV85_011700 PF00384 Molybdopterin oxidoreductase HCV85_011705 PF12800 4Fe-4S binding domain HCV85_011705 PF13247 4Fe-4S dicluster domain HCV85_011710 PF04976 DMSO reductase anchor subunit (DmsC) HCV85_011715 PF07690 Major Facilitator Superfamily HCV85_011720 PF04055 Radical SAM superfamily HCV85_011725 PF02901 Pyruvate formate lyase-like HCV85_011725 PF01228 Glycine radical HCV85_011730 PF01226 Formate/nitrite transporter HCV85_011735 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HCV85_011735 PF18381 YcaO cyclodehydratase C-terminal domain HCV85_011740 PF04239 Protein of unknown function (DUF421) HCV85_011745 PF00266 Aminotransferase class-V HCV85_011750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCV85_011755 PF02224 Cytidylate kinase HCV85_011760 PF00575 S1 RNA binding domain HCV85_011765 PF00216 Bacterial DNA-binding protein HCV85_011770 PF03772 Competence protein HCV85_011770 PF00753 Metallo-beta-lactamase superfamily HCV85_011775 PF00005 ABC transporter HCV85_011775 PF00664 ABC transporter transmembrane region HCV85_011780 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HCV85_011785 PF06224 Winged helix DNA-binding domain HCV85_011790 PF03966 Trm112p-like protein HCV85_011795 PF02348 Cytidylyltransferase HCV85_011800 PF01636 Phosphotransferase enzyme family HCV85_011805 PF02698 DUF218 domain HCV85_011810 PF13847 Methyltransferase domain HCV85_011815 PF17193 MukF C-terminal domain HCV85_011815 PF03882 MukF winged-helix domain HCV85_011815 PF17192 MukF middle domain HCV85_011820 PF04288 MukE-like family HCV85_011825 PF04310 MukB N-terminal HCV85_011825 PF16330 MukB hinge domain HCV85_011830 PF01471 Putative peptidoglycan binding domain HCV85_011830 PF03734 L,D-transpeptidase catalytic domain HCV85_011835 PF05951 Bacterial protein of unknown function (DUF882) HCV85_011840 PF00753 Metallo-beta-lactamase superfamily HCV85_011845 PF00155 Aminotransferase class I and II HCV85_011855 PF00152 tRNA synthetases class II (D, K and N) HCV85_011855 PF01336 OB-fold nucleic acid binding domain HCV85_011865 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_011875 PF07687 Peptidase dimerisation domain HCV85_011875 PF01546 Peptidase family M20/M25/M40 HCV85_011880 PF07687 Peptidase dimerisation domain HCV85_011880 PF01546 Peptidase family M20/M25/M40 HCV85_011885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HCV85_011885 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HCV85_011890 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HCV85_011890 PF01433 Peptidase family M1 domain HCV85_011890 PF11940 Domain of unknown function (DUF3458) Ig-like fold HCV85_011895 PF00005 ABC transporter HCV85_011900 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_011905 PF00296 Luciferase-like monooxygenase HCV85_011910 PF09084 NMT1/THI5 like HCV85_011915 PF03358 NADPH-dependent FMN reductase HCV85_011920 PF01180 Dihydroorotate dehydrogenase HCV85_011925 PF07126 Cell-division protein ZapC HCV85_011930 PF03476 MOSC N-terminal beta barrel domain HCV85_011930 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_011930 PF03473 MOSC domain HCV85_011935 PF01170 Putative RNA methylase family UPF0020 HCV85_011935 PF10672 S-adenosylmethionine-dependent methyltransferase HCV85_011935 PF02926 THUMP domain HCV85_011940 PF12848 ABC transporter HCV85_011940 PF16326 ABC transporter C-terminal domain HCV85_011940 PF00005 ABC transporter HCV85_011945 PF04403 Paraquat-inducible protein A HCV85_011950 PF02470 MlaD protein HCV85_011955 PF03886 ABC-type transport auxiliary lipoprotein component HCV85_011960 PF04957 Ribosome modulation factor HCV85_011965 PF07977 FabA-like domain HCV85_011970 PF13654 AAA domain HCV85_011970 PF05362 Lon protease (S16) C-terminal proteolytic domain HCV85_011975 PF06303 MatP N-terminal domain HCV85_011975 PF17414 MatP C-terminal ribbon-helix-helix domain HCV85_011980 PF00691 OmpA family HCV85_011980 PF01389 OmpA-like transmembrane domain HCV85_011985 PF03846 Cell division inhibitor SulA HCV85_011990 PF04994 TfoX C-terminal domain HCV85_011990 PF04993 TfoX N-terminal domain HCV85_011995 PF12805 FUSC-like inner membrane protein yccS HCV85_012000 PF03733 Inner membrane component domain HCV85_012005 PF13361 UvrD-like helicase C-terminal domain HCV85_012005 PF12462 DNA helicase IV / RNA helicase N terminal HCV85_012005 PF00580 UvrD/REP helicase N-terminal domain HCV85_012010 PF02142 MGS-like domain HCV85_012015 PF13380 CoA binding domain HCV85_012020 PF08755 Hemimethylated DNA-binding protein YccV like HCV85_012025 PF10672 S-adenosylmethionine-dependent methyltransferase HCV85_012025 PF17785 PUA-like domain HCV85_012030 PF01161 Phosphatidylethanolamine-binding protein HCV85_012035 PF12833 Helix-turn-helix domain HCV85_012040 PF00708 Acylphosphatase HCV85_012045 PF04358 DsrC like protein HCV85_012050 PF01027 Inhibitor of apoptosis-promoting Bax1 HCV85_012055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_012075 PF00970 Oxidoreductase FAD-binding domain HCV85_012075 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_012075 PF00175 Oxidoreductase NAD-binding domain HCV85_012080 PF00171 Aldehyde dehydrogenase family HCV85_012085 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HCV85_012085 PF00355 Rieske [2Fe-2S] domain HCV85_012090 PF02028 BCCT, betaine/carnitine/choline family transporter HCV85_012095 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV85_012100 PF03466 LysR substrate binding domain HCV85_012100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_012105 PF01266 FAD dependent oxidoreductase HCV85_012110 PF00171 Aldehyde dehydrogenase family HCV85_012115 PF01381 Helix-turn-helix HCV85_012115 PF07883 Cupin domain HCV85_012120 PF07722 Peptidase C26 HCV85_012125 PF00120 Glutamine synthetase, catalytic domain HCV85_012130 PF00324 Amino acid permease HCV85_012150 PF01638 HxlR-like helix-turn-helix HCV85_012155 PF00328 Histidine phosphatase superfamily (branch 2) HCV85_012160 PF13993 YccJ-like protein HCV85_012165 PF03358 NADPH-dependent FMN reductase HCV85_012175 PF10685 Stress-induced bacterial acidophilic repeat motif HCV85_012185 PF00860 Permease family HCV85_012190 PF01613 Flavin reductase like domain HCV85_012195 PF00881 Nitroreductase family HCV85_012200 PF00561 alpha/beta hydrolase fold HCV85_012205 PF01042 Endoribonuclease L-PSP HCV85_012210 PF00857 Isochorismatase family HCV85_012215 PF00296 Luciferase-like monooxygenase HCV85_012220 PF08362 YcdC-like protein, C-terminal region HCV85_012220 PF00440 Bacterial regulatory proteins, tetR family HCV85_012235 PF00474 Sodium:solute symporter family HCV85_012245 PF07670 Nucleoside recognition HCV85_012245 PF01773 Na+ dependent nucleoside transporter N-terminus HCV85_012245 PF07662 Na+ dependent nucleoside transporter C-terminus HCV85_012250 PF03239 Iron permease FTR1 family HCV85_012255 PF13473 Cupredoxin-like domain HCV85_012255 PF09375 Imelysin HCV85_012260 PF04261 Dyp-type peroxidase family HCV85_012265 PF02562 PhoH-like protein HCV85_012270 PF01323 DSBA-like thioredoxin domain HCV85_012280 PF00857 Isochorismatase family HCV85_012285 PF02678 Pirin HCV85_012285 PF05726 Pirin C-terminal cupin domain HCV85_012290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_012290 PF03466 LysR substrate binding domain HCV85_012310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_012315 PF02811 PHP domain HCV85_012320 PF02613 Nitrate reductase delta subunit HCV85_012325 PF06496 Protein of unknown function (DUF1097) HCV85_012330 PF01661 Macro domain HCV85_012335 PF00440 Bacterial regulatory proteins, tetR family HCV85_012335 PF13977 BetI-type transcriptional repressor, C-terminal HCV85_012340 PF01757 Acyltransferase family HCV85_012345 PF04349 Periplasmic glucan biosynthesis protein, MdoG HCV85_012350 PF00535 Glycosyl transferase family 2 HCV85_012355 PF07119 Protein of unknown function (DUF1375) HCV85_012360 PF13984 MsyB protein HCV85_012365 PF07690 Major Facilitator Superfamily HCV85_012370 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV85_012375 PF00581 Rhodanese-like domain HCV85_012375 PF12368 Rhodanase C-terminal HCV85_012375 PF17773 UPF0176 acylphosphatase like domain HCV85_012380 PF10968 Protein of unknown function (DUF2770) HCV85_012385 PF01266 FAD dependent oxidoreductase HCV85_012390 PF13991 BssS protein family HCV85_012395 PF06183 DinI-like family HCV85_012400 PF01979 Amidohydrolase family HCV85_012405 PF07273 Protein of unknown function (DUF1439) HCV85_012410 PF07690 Major Facilitator Superfamily HCV85_012415 PF13302 Acetyltransferase (GNAT) domain HCV85_012420 PF04337 Protein of unknown function, DUF480 HCV85_012425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_012430 PF03023 Lipid II flippase MurJ HCV85_012435 PF07690 Major Facilitator Superfamily HCV85_012440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_012440 PF03466 LysR substrate binding domain HCV85_012445 PF10150 Ribonuclease E/G family HCV85_012445 PF12111 Polyribonucleotide phosphorylase C terminal HCV85_012445 PF00575 S1 RNA binding domain HCV85_012455 PF01479 S4 domain HCV85_012455 PF00849 RNA pseudouridylate synthase HCV85_012460 PF02545 Maf-like protein HCV85_012465 PF02620 Large ribosomal RNA subunit accumulation protein YceD HCV85_012470 PF01783 Ribosomal L32p protein family HCV85_012475 PF02504 Fatty acid synthesis protein HCV85_012480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HCV85_012480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HCV85_012485 PF00698 Acyl transferase domain HCV85_012495 PF00550 Phosphopantetheine attachment site HCV85_012500 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV85_012500 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV85_012505 PF01063 Amino-transferase class IV HCV85_012510 PF02618 YceG-like family HCV85_012515 PF02223 Thymidylate kinase HCV85_012520 PF09115 DNA polymerase III, delta subunit, C terminal HCV85_012525 PF01026 TatD related DNase HCV85_012530 PF02378 Phosphotransferase system, EIIC HCV85_012530 PF00367 phosphotransferase system, EIIB HCV85_012535 PF01230 HIT domain HCV85_012540 PF07233 Protein of unknown function (DUF1425) HCV85_012545 PF13036 Peptidoglycan-synthase activator LpoB HCV85_012550 PF01636 Phosphotransferase enzyme family HCV85_012555 PF00933 Glycosyl hydrolase family 3 N terminal domain HCV85_012560 PF05728 Uncharacterised protein family (UPF0227) HCV85_012565 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_012570 PF05433 Glycine zipper 2TM domain HCV85_012575 PF07715 TonB-dependent Receptor Plug Domain HCV85_012575 PF00593 TonB dependent receptor HCV85_012585 PF00440 Bacterial regulatory proteins, tetR family HCV85_012595 PF07338 Protein of unknown function (DUF1471) HCV85_012600 PF03734 L,D-transpeptidase catalytic domain HCV85_012600 PF01476 LysM domain HCV85_012600 PF17969 L,D-transpeptidase C-terminal domain HCV85_012605 PF00270 DEAD/DEAH box helicase HCV85_012605 PF02559 CarD-like/TRCF domain HCV85_012605 PF03461 TRCF domain HCV85_012605 PF17757 UvrB interaction domain HCV85_012605 PF00271 Helicase conserved C-terminal domain HCV85_012615 PF12704 MacB-like periplasmic core domain HCV85_012615 PF02687 FtsX-like permease family HCV85_012620 PF00005 ABC transporter HCV85_012625 PF02687 FtsX-like permease family HCV85_012625 PF12704 MacB-like periplasmic core domain HCV85_012630 PF00480 ROK family HCV85_012635 PF02146 Sir2 family HCV85_012645 PF13193 AMP-binding enzyme C-terminal domain HCV85_012645 PF00501 AMP-binding enzyme HCV85_012655 PF13416 Bacterial extracellular solute-binding protein HCV85_012660 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_012665 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_012670 PF08402 TOBE domain HCV85_012670 PF00005 ABC transporter HCV85_012675 PF07687 Peptidase dimerisation domain HCV85_012675 PF01546 Peptidase family M20/M25/M40 HCV85_012680 PF08007 Cupin superfamily protein HCV85_012685 PF08918 PhoQ Sensor HCV85_012685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_012690 PF00072 Response regulator receiver domain HCV85_012690 PF00486 Transcriptional regulatory protein, C terminal HCV85_012705 PF08328 Adenylosuccinate lyase C-terminal HCV85_012705 PF00206 Lyase HCV85_012710 PF04356 Protein of unknown function (DUF489) HCV85_012720 PF00293 NUDIX domain HCV85_012725 PF00849 RNA pseudouridylate synthase HCV85_012730 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV85_012755 PF06906 Protein of unknown function (DUF1272) HCV85_012760 PF13823 Alcohol dehydrogenase GroES-associated HCV85_012760 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_012760 PF00107 Zinc-binding dehydrogenase HCV85_012765 PF10685 Stress-induced bacterial acidophilic repeat motif HCV85_012770 PF05974 Domain of unknown function (DUF892) HCV85_012775 PF05974 Domain of unknown function (DUF892) HCV85_012780 PF05067 Manganese containing catalase HCV85_012785 PF01654 Cytochrome bd terminal oxidase subunit I HCV85_012790 PF02322 Cytochrome bd terminal oxidase subunit II HCV85_012820 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCV85_012825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_012825 PF03466 LysR substrate binding domain HCV85_012830 PF00990 Diguanylate cyclase, GGDEF domain HCV85_012835 PF01966 HD domain HCV85_012840 PF17763 Glutaminase/Asparaginase C-terminal domain HCV85_012840 PF00710 Asparaginase, N-terminal HCV85_012845 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV85_012850 PF01810 LysE type translocator HCV85_012855 PF10749 Protein of unknown function (DUF2534) HCV85_012875 PF13185 GAF domain HCV85_012875 PF00990 Diguanylate cyclase, GGDEF domain HCV85_012880 PF03891 Domain of unknown function (DUF333) HCV85_012885 PF04343 Protein of unknown function, DUF488 HCV85_012890 PF04463 Protein of unknown function (DUF523) HCV85_012895 PF06418 CTP synthase N-terminus HCV85_012895 PF00117 Glutamine amidotransferase class-I HCV85_012900 PF07690 Major Facilitator Superfamily HCV85_012905 PF02311 AraC-like ligand binding domain HCV85_012905 PF12833 Helix-turn-helix domain HCV85_012910 PF04284 Protein of unknown function (DUF441) HCV85_012915 PF04073 Aminoacyl-tRNA editing domain HCV85_012920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HCV85_012925 PF06183 DinI-like family HCV85_012930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HCV85_012935 PF00717 Peptidase S24-like HCV85_012940 PF11798 IMS family HHH motif HCV85_012940 PF13438 Domain of unknown function (DUF4113) HCV85_012940 PF11799 impB/mucB/samB family C-terminal domain HCV85_012940 PF00817 impB/mucB/samB family HCV85_012945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_012945 PF03466 LysR substrate binding domain HCV85_012955 PF07690 Major Facilitator Superfamily HCV85_012960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_012960 PF03466 LysR substrate binding domain HCV85_012975 PF00255 Glutathione peroxidase HCV85_012985 PF04285 Protein of unknown function (DUF444) HCV85_012990 PF08298 PrkA AAA domain HCV85_012990 PF06798 PrkA serine protein kinase C-terminal domain HCV85_012995 PF06629 MltA-interacting protein MipA HCV85_013000 PF00248 Aldo/keto reductase family HCV85_013005 PF01263 Aldose 1-epimerase HCV85_013010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCV85_013010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCV85_013015 PF01641 SelR domain HCV85_013020 PF07023 Protein of unknown function (DUF1315) HCV85_013025 PF01844 HNH endonuclease HCV85_013030 PF00704 Glycosyl hydrolases family 18 HCV85_013030 PF00041 Fibronectin type III domain HCV85_013035 PF00107 Zinc-binding dehydrogenase HCV85_013035 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_013040 PF00083 Sugar (and other) transporter HCV85_013045 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_013045 PF00107 Zinc-binding dehydrogenase HCV85_013050 PF01116 Fructose-bisphosphate aldolase class-II HCV85_013055 PF00294 pfkB family carbohydrate kinase HCV85_013060 PF00248 Aldo/keto reductase family HCV85_013065 PF08220 DeoR-like helix-turn-helix domain HCV85_013065 PF00455 DeoR C terminal sensor domain HCV85_013070 PF00083 Sugar (and other) transporter HCV85_013075 PF00857 Isochorismatase family HCV85_013080 PF00710 Asparaginase, N-terminal HCV85_013080 PF17763 Glutaminase/Asparaginase C-terminal domain HCV85_013085 PF01343 Peptidase family S49 HCV85_013090 PF00881 Nitroreductase family HCV85_013100 PF01569 PAP2 superfamily HCV85_013105 PF00586 AIR synthase related protein, N-terminal domain HCV85_013105 PF02769 AIR synthase related protein, C-terminal domain HCV85_013110 PF01751 Toprim domain HCV85_013110 PF01131 DNA topoisomerase HCV85_013115 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV85_013115 PF08659 KR domain HCV85_013115 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV85_013115 PF14765 Polyketide synthase dehydratase HCV85_013115 PF16197 Ketoacyl-synthetase C-terminal extension HCV85_013115 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_013115 PF00698 Acyl transferase domain HCV85_013115 PF00550 Phosphopantetheine attachment site HCV85_013120 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCV85_013120 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCV85_013125 PF00293 NUDIX domain HCV85_013130 PF01066 CDP-alcohol phosphatidyltransferase HCV85_013135 PF00581 Rhodanese-like domain HCV85_013140 PF00005 ABC transporter HCV85_013145 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_013150 PF13416 Bacterial extracellular solute-binding protein HCV85_013155 PF02627 Carboxymuconolactone decarboxylase family HCV85_013160 PF09335 SNARE associated Golgi protein HCV85_013165 PF09335 SNARE associated Golgi protein HCV85_013170 PF03372 Endonuclease/Exonuclease/phosphatase family HCV85_013175 PF00202 Aminotransferase class-III HCV85_013180 PF04958 Arginine N-succinyltransferase beta subunit HCV85_013185 PF00171 Aldehyde dehydrogenase family HCV85_013190 PF04996 Succinylarginine dihydrolase HCV85_013195 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HCV85_013200 PF07813 LTXXQ motif family protein HCV85_013210 PF02540 NAD synthase HCV85_013215 PF04355 SmpA / OmlA family HCV85_013220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_013230 PF02378 Phosphotransferase system, EIIC HCV85_013235 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV85_013240 PF12833 Helix-turn-helix domain HCV85_013240 PF07883 Cupin domain HCV85_013245 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV85_013245 PF02056 Family 4 glycosyl hydrolase HCV85_013250 PF04794 YdjC-like protein HCV85_013255 PF06628 Catalase-related immune-responsive HCV85_013255 PF18011 C-terminal domain found in long catalases HCV85_013255 PF00199 Catalase HCV85_013260 PF10729 Cell division activator CedA HCV85_013265 PF00375 Sodium:dicarboxylate symporter family HCV85_013270 PF04307 LexA-binding, inner membrane-associated putative hydrolase HCV85_013280 PF13419 Haloacid dehalogenase-like hydrolase HCV85_013285 PF14002 YniB-like protein HCV85_013290 PF03061 Thioesterase superfamily HCV85_013295 PF07715 TonB-dependent Receptor Plug Domain HCV85_013295 PF00593 TonB dependent receptor HCV85_013300 PF04279 Intracellular septation protein A HCV85_013310 PF03692 Putative zinc- or iron-chelating domain HCV85_013315 PF03922 OmpW family HCV85_013320 PF18331 PKHD-type hydroxylase C-terminal domain HCV85_013320 PF13640 2OG-Fe(II) oxygenase superfamily HCV85_013325 PF00593 TonB dependent receptor HCV85_013325 PF07715 TonB-dependent Receptor Plug Domain HCV85_013330 PF00106 short chain dehydrogenase HCV85_013350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_013350 PF03466 LysR substrate binding domain HCV85_013355 PF07690 Major Facilitator Superfamily HCV85_013360 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV85_013365 PF05161 MOFRL family HCV85_013365 PF13660 Domain of unknown function (DUF4147) HCV85_013370 PF00290 Tryptophan synthase alpha chain HCV85_013375 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_013380 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HCV85_013380 PF00218 Indole-3-glycerol phosphate synthase HCV85_013385 PF00591 Glycosyl transferase family, a/b domain HCV85_013385 PF00117 Glutamine amidotransferase class-I HCV85_013385 PF02885 Glycosyl transferase family, helical bundle domain HCV85_013390 PF04715 Anthranilate synthase component I, N terminal region HCV85_013390 PF00425 chorismate binding enzyme HCV85_013395 PF02811 PHP domain HCV85_013400 PF01300 Telomere recombination HCV85_013410 PF03466 LysR substrate binding domain HCV85_013410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_013415 PF00849 RNA pseudouridylate synthase HCV85_013415 PF01479 S4 domain HCV85_013420 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HCV85_013420 PF12557 Cob(I)alamin adenosyltransferase N terminal HCV85_013425 PF00106 short chain dehydrogenase HCV85_013435 PF01343 Peptidase family S49 HCV85_013435 PF08496 Peptidase family S49 N-terminal HCV85_013440 PF10692 Protein of unknown function (DUF2498) HCV85_013445 PF01396 Topoisomerase DNA binding C4 zinc finger HCV85_013445 PF01751 Toprim domain HCV85_013445 PF01131 DNA topoisomerase HCV85_013445 PF08272 Topoisomerase I zinc-ribbon-like HCV85_013450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_013450 PF03466 LysR substrate binding domain HCV85_013460 PF00694 Aconitase C-terminal domain HCV85_013460 PF00330 Aconitase family (aconitate hydratase) HCV85_013465 PF00925 GTP cyclohydrolase II HCV85_013470 PF01569 PAP2 superfamily HCV85_013475 PF06305 Lipopolysaccharide assembly protein A domain HCV85_013480 PF18073 Rubredoxin metal binding domain HCV85_013485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCV85_013490 PF01253 Translation initiation factor SUI1 HCV85_013495 PF05433 Glycine zipper 2TM domain HCV85_013500 PF08220 DeoR-like helix-turn-helix domain HCV85_013500 PF00455 DeoR C terminal sensor domain HCV85_013510 PF00575 S1 RNA binding domain HCV85_013510 PF00773 RNB domain HCV85_013510 PF08206 Ribonuclease B OB domain HCV85_013510 PF17876 Cold shock domain HCV85_013525 PF05962 HutD HCV85_013530 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCV85_013535 PF00005 ABC transporter HCV85_013540 PF00005 ABC transporter HCV85_013540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_013545 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_013545 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_013660 PF00149 Calcineurin-like phosphoesterase HCV85_013710 PF10668 Phage terminase small subunit HCV85_013710 PF03592 Terminase small subunit HCV85_013805 PF06791 Prophage tail length tape measure protein HCV85_013810 PF05598 Transposase domain (DUF772) HCV85_013810 PF01609 Transposase DDE domain HCV85_013870 PF13610 DDE domain HCV85_013880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HCV85_013885 PF00717 Peptidase S24-like HCV85_013890 PF11799 impB/mucB/samB family C-terminal domain HCV85_013890 PF00817 impB/mucB/samB family HCV85_013890 PF13438 Domain of unknown function (DUF4113) HCV85_013890 PF11798 IMS family HHH motif HCV85_013900 PF02586 SOS response associated peptidase (SRAP) HCV85_013905 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_013910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_013915 PF13460 NAD(P)H-binding HCV85_013925 PF12833 Helix-turn-helix domain HCV85_013930 PF01546 Peptidase family M20/M25/M40 HCV85_013930 PF07687 Peptidase dimerisation domain HCV85_013935 PF07690 Major Facilitator Superfamily HCV85_013940 PF00158 Sigma-54 interaction domain HCV85_013940 PF02954 Bacterial regulatory protein, Fis family HCV85_013945 PF04012 PspA/IM30 family HCV85_013950 PF06667 Phage shock protein B HCV85_013955 PF04024 PspC domain HCV85_013960 PF09584 Phage shock protein PspD (Phageshock_PspD) HCV85_013965 PF04317 YcjX-like family, DUF463 HCV85_013970 PF05128 Domain of unknown function (DUF697) HCV85_013975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_013975 PF03466 LysR substrate binding domain HCV85_013980 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV85_013980 PF02056 Family 4 glycosyl hydrolase HCV85_013985 PF18024 Helix-turn-helix domain HCV85_013985 PF00158 Sigma-54 interaction domain HCV85_013990 PF05145 Transition state regulatory protein AbrB HCV85_013995 PF08534 Redoxin HCV85_014000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV85_014000 PF13378 Enolase C-terminal domain-like HCV85_014005 PF00246 Zinc carboxypeptidase HCV85_014015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_014030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_014030 PF03466 LysR substrate binding domain HCV85_014035 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HCV85_014040 PF07690 Major Facilitator Superfamily HCV85_014045 PF00248 Aldo/keto reductase family HCV85_014065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_014065 PF03466 LysR substrate binding domain HCV85_014075 PF01966 HD domain HCV85_014080 PF01965 DJ-1/PfpI family HCV85_014085 PF14659 Phage integrase, N-terminal SAM-like domain HCV85_014085 PF13356 Arm DNA-binding domain HCV85_014085 PF00589 Phage integrase family HCV85_014165 PF01381 Helix-turn-helix HCV85_014165 PF00717 Peptidase S24-like HCV85_014190 PF03589 Antitermination protein HCV85_014200 PF00959 Phage lysozyme HCV85_014220 PF04466 Phage terminase large subunit HCV85_014220 PF17288 Terminase RNAseH like domain HCV85_014225 PF06381 Protein of unknown function (DUF1073) HCV85_014305 PF01464 Transglycosylase SLT domain HCV85_014305 PF10145 Phage-related minor tail protein HCV85_014305 PF01551 Peptidase family M23 HCV85_014395 PF06183 DinI-like family HCV85_014405 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath HCV85_014420 PF13488 Glycine zipper HCV85_014420 PF00691 OmpA family HCV85_014430 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_014430 PF07724 AAA domain (Cdc48 subfamily) HCV85_014430 PF17871 AAA lid domain HCV85_014430 PF10431 C-terminal, D2-small domain, of ClpB protein HCV85_014435 PF04717 Type VI secretion system, phage-baseplate injector HCV85_014435 PF13296 Putative type VI secretion system Rhs element Vgr HCV85_014435 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HCV85_014520 PF00440 Bacterial regulatory proteins, tetR family HCV85_014545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_014545 PF03466 LysR substrate binding domain HCV85_014560 PF00753 Metallo-beta-lactamase superfamily HCV85_014570 PF00440 Bacterial regulatory proteins, tetR family HCV85_014575 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_014575 PF00107 Zinc-binding dehydrogenase HCV85_014580 PF00155 Aminotransferase class I and II HCV85_014585 PF03180 NLPA lipoprotein HCV85_014590 PF09383 NIL domain HCV85_014590 PF00005 ABC transporter HCV85_014595 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_014600 PF00155 Aminotransferase class I and II HCV85_014610 PF01037 Lrp/AsnC ligand binding domain HCV85_014615 PF00324 Amino acid permease HCV85_014630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_014630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_014635 PF08220 DeoR-like helix-turn-helix domain HCV85_014635 PF00455 DeoR C terminal sensor domain HCV85_014640 PF01544 CorA-like Mg2+ transporter protein HCV85_014645 PF00271 Helicase conserved C-terminal domain HCV85_014645 PF00270 DEAD/DEAH box helicase HCV85_014645 PF03880 DbpA RNA binding domain HCV85_014650 PF01171 PP-loop family HCV85_014655 PF00582 Universal stress protein family HCV85_014665 PF00267 Gram-negative porin HCV85_014670 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HCV85_014670 PF10371 Domain of unknown function HCV85_014670 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HCV85_014670 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HCV85_014670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_014675 PF03891 Domain of unknown function (DUF333) HCV85_014680 PF03724 META domain HCV85_014685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_014685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV85_014690 PF09335 SNARE associated Golgi protein HCV85_014695 PF11739 Dicarboxylate transport HCV85_014700 PF13617 YnbE-like lipoprotein HCV85_014705 PF07027 Protein of unknown function (DUF1318) HCV85_014710 PF14525 AraC-binding-like domain HCV85_014710 PF12833 Helix-turn-helix domain HCV85_014715 PF00171 Aldehyde dehydrogenase family HCV85_014720 PF02558 Ketopantoate reductase PanE/ApbA HCV85_014720 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCV85_014730 PF01179 Copper amine oxidase, enzyme domain HCV85_014730 PF02728 Copper amine oxidase, N3 domain HCV85_014730 PF02727 Copper amine oxidase, N2 domain HCV85_014730 PF07833 Copper amine oxidase N-terminal domain HCV85_014735 PF01575 MaoC like domain HCV85_014735 PF00171 Aldehyde dehydrogenase family HCV85_014740 PF05138 Phenylacetic acid catabolic protein HCV85_014745 PF06243 Phenylacetic acid degradation B HCV85_014750 PF05138 Phenylacetic acid catabolic protein HCV85_014755 PF01883 Iron-sulfur cluster assembly protein HCV85_014760 PF00175 Oxidoreductase NAD-binding domain HCV85_014760 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_014760 PF00970 Oxidoreductase FAD-binding domain HCV85_014765 PF00378 Enoyl-CoA hydratase/isomerase HCV85_014770 PF00378 Enoyl-CoA hydratase/isomerase HCV85_014775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV85_014775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV85_014775 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HCV85_014780 PF03061 Thioesterase superfamily HCV85_014785 PF00108 Thiolase, N-terminal domain HCV85_014785 PF02803 Thiolase, C-terminal domain HCV85_014790 PF00501 AMP-binding enzyme HCV85_014790 PF14535 AMP-binding enzyme C-terminal domain HCV85_014795 PF07848 PaaX-like protein HCV85_014795 PF08223 PaaX-like protein C-terminal domain HCV85_014800 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_014810 PF02525 Flavodoxin-like fold HCV85_014815 PF00271 Helicase conserved C-terminal domain HCV85_014815 PF11898 Domain of unknown function (DUF3418) HCV85_014815 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HCV85_014815 PF04408 Helicase associated domain (HA2) HCV85_014815 PF00270 DEAD/DEAH box helicase HCV85_014820 PF01596 O-methyltransferase HCV85_014825 PF02321 Outer membrane efflux protein HCV85_014830 PF13533 Biotin-lipoyl like HCV85_014845 PF03466 LysR substrate binding domain HCV85_014845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_014850 PF00248 Aldo/keto reductase family HCV85_014855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCV85_014855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCV85_014865 PF00202 Aminotransferase class-III HCV85_014870 PF04958 Arginine N-succinyltransferase beta subunit HCV85_014875 PF00171 Aldehyde dehydrogenase family HCV85_014880 PF04996 Succinylarginine dihydrolase HCV85_014885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HCV85_014890 PF00324 Amino acid permease HCV85_014895 PF07690 Major Facilitator Superfamily HCV85_014895 PF00083 Sugar (and other) transporter HCV85_014900 PF02698 DUF218 domain HCV85_014910 PF00171 Aldehyde dehydrogenase family HCV85_014915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCV85_014915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCV85_014920 PF01679 Proteolipid membrane potential modulator HCV85_014925 PF07166 Protein of unknown function (DUF1398) HCV85_014930 PF01206 Sulfurtransferase TusA HCV85_014935 PF04143 Sulphur transport HCV85_014950 PF14001 YdfZ protein HCV85_014960 PF00155 Aminotransferase class I and II HCV85_014965 PF00367 phosphotransferase system, EIIB HCV85_014965 PF02378 Phosphotransferase system, EIIC HCV85_014970 PF00356 Bacterial regulatory proteins, lacI family HCV85_014970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV85_014975 PF06097 Bacterial protein of unknown function (DUF945) HCV85_014980 PF01238 Phosphomannose isomerase type I HCV85_014985 PF05683 Fumarase C-terminus HCV85_014985 PF05681 Fumarate hydratase (Fumerase) HCV85_014990 PF10415 Fumarase C C-terminus HCV85_014990 PF00206 Lyase HCV85_014995 PF05472 DNA replication terminus site-binding protein (Ter protein) HCV85_015000 PF00512 His Kinase A (phospho-acceptor) domain HCV85_015000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_015000 PF00672 HAMP domain HCV85_015010 PF00486 Transcriptional regulatory protein, C terminal HCV85_015010 PF00072 Response regulator receiver domain HCV85_015015 PF06942 GlpM protein HCV85_015025 PF13520 Amino acid permease HCV85_015030 PF07338 Protein of unknown function (DUF1471) HCV85_015040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HCV85_015040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HCV85_015040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HCV85_015045 PF02233 NAD(P) transhydrogenase beta subunit HCV85_015050 PF15930 Domain of unknown function HCV85_015055 PF00582 Universal stress protein family HCV85_015060 PF00325 Bacterial regulatory proteins, crp family HCV85_015060 PF00027 Cyclic nucleotide-binding domain HCV85_015065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCV85_015065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV85_015075 PF03806 AbgT putative transporter family HCV85_015085 PF01546 Peptidase family M20/M25/M40 HCV85_015085 PF07687 Peptidase dimerisation domain HCV85_015090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015090 PF03466 LysR substrate binding domain HCV85_015095 PF01713 Smr domain HCV85_015100 PF01614 Bacterial transcriptional regulator HCV85_015100 PF09339 IclR helix-turn-helix domain HCV85_015105 PF01144 Coenzyme A transferase HCV85_015110 PF01144 Coenzyme A transferase HCV85_015115 PF00108 Thiolase, N-terminal domain HCV85_015115 PF02803 Thiolase, C-terminal domain HCV85_015120 PF00206 Lyase HCV85_015120 PF10397 Adenylosuccinate lyase C-terminus HCV85_015125 PF12146 Serine aminopeptidase, S33 HCV85_015130 PF02627 Carboxymuconolactone decarboxylase family HCV85_015140 PF05683 Fumarase C-terminus HCV85_015140 PF05681 Fumarate hydratase (Fumerase) HCV85_015145 PF00939 Sodium:sulfate symporter transmembrane region HCV85_015150 PF14537 Cytochrome c3 HCV85_015150 PF00890 FAD binding domain HCV85_015155 PF02424 ApbE family HCV85_015160 PF00072 Response regulator receiver domain HCV85_015165 PF17203 Single cache domain 3 HCV85_015165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_015165 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCV85_015165 PF00989 PAS fold HCV85_015175 PF13580 SIS domain HCV85_015180 PF06039 Malate:quinone oxidoreductase (Mqo) HCV85_015185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015185 PF03466 LysR substrate binding domain HCV85_015190 PF00698 Acyl transferase domain HCV85_015195 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HCV85_015200 PF03547 Membrane transport protein HCV85_015210 PF01039 Carboxyl transferase domain HCV85_015215 PF06857 Malonate decarboxylase delta subunit (MdcD) HCV85_015220 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HCV85_015225 PF16957 Malonate decarboxylase, alpha subunit, transporter HCV85_015230 PF01594 AI-2E family transporter HCV85_015235 PF00893 Small Multidrug Resistance protein HCV85_015240 PF00893 Small Multidrug Resistance protein HCV85_015250 PF00089 Trypsin HCV85_015260 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HCV85_015265 PF07690 Major Facilitator Superfamily HCV85_015270 PF03466 LysR substrate binding domain HCV85_015270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015275 PF00480 ROK family HCV85_015285 PF00654 Voltage gated chloride channel HCV85_015290 PF02613 Nitrate reductase delta subunit HCV85_015295 PF04976 DMSO reductase anchor subunit (DmsC) HCV85_015300 PF13247 4Fe-4S dicluster domain HCV85_015300 PF12800 4Fe-4S binding domain HCV85_015305 PF01568 Molydopterin dinucleotide binding domain HCV85_015305 PF00384 Molybdopterin oxidoreductase HCV85_015305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV85_015310 PF06649 Protein of unknown function (DUF1161) HCV85_015315 PF06788 Uncharacterised protein family (UPF0257) HCV85_015320 PF13302 Acetyltransferase (GNAT) domain HCV85_015325 PF06932 Protein of unknown function (DUF1283) HCV85_015330 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HCV85_015335 PF07690 Major Facilitator Superfamily HCV85_015340 PF08125 Mannitol dehydrogenase C-terminal domain HCV85_015340 PF01232 Mannitol dehydrogenase Rossmann domain HCV85_015345 PF00582 Universal stress protein family HCV85_015350 PF00392 Bacterial regulatory proteins, gntR family HCV85_015350 PF07729 FCD domain HCV85_015355 PF00106 short chain dehydrogenase HCV85_015360 PF01432 Peptidase family M3 HCV85_015370 PF12833 Helix-turn-helix domain HCV85_015370 PF02311 AraC-like ligand binding domain HCV85_015375 PF02586 SOS response associated peptidase (SRAP) HCV85_015390 PF00196 Bacterial regulatory proteins, luxR family HCV85_015390 PF00072 Response regulator receiver domain HCV85_015405 PF00011 Hsp20/alpha crystallin family HCV85_015410 PF02464 Competence-damaged protein HCV85_015415 PF00563 EAL domain HCV85_015415 PF04940 Sensors of blue-light using FAD HCV85_015420 PF01609 Transposase DDE domain HCV85_015420 PF05598 Transposase domain (DUF772) HCV85_015425 PF04076 Bacterial OB fold (BOF) protein HCV85_015435 PF02566 OsmC-like protein HCV85_015455 PF16916 Dimerisation domain of Zinc Transporter HCV85_015455 PF01545 Cation efflux family HCV85_015460 PF01062 Bestrophin, RFP-TM, chloride channel HCV85_015465 PF00384 Molybdopterin oxidoreductase HCV85_015470 PF03466 LysR substrate binding domain HCV85_015470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015475 PF00083 Sugar (and other) transporter HCV85_015480 PF02308 MgtC family HCV85_015485 PF03969 AFG1-like ATPase HCV85_015490 PF00141 Peroxidase HCV85_015495 PF03466 LysR substrate binding domain HCV85_015495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015510 PF00905 Penicillin binding protein transpeptidase domain HCV85_015510 PF03717 Penicillin-binding Protein dimerisation domain HCV85_015515 PF00117 Glutamine amidotransferase class-I HCV85_015515 PF00958 GMP synthase C terminal domain HCV85_015515 PF02540 NAD synthase HCV85_015520 PF00675 Insulinase (Peptidase family M16) HCV85_015525 PF13186 Iron-sulfur cluster-binding domain HCV85_015525 PF04055 Radical SAM superfamily HCV85_015530 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HCV85_015535 PF03070 TENA/THI-4/PQQC family HCV85_015540 PF12706 Beta-lactamase superfamily domain HCV85_015545 PF08042 PqqA family HCV85_015550 PF01244 Membrane dipeptidase (Peptidase family M19) HCV85_015555 PF00561 alpha/beta hydrolase fold HCV85_015560 PF00486 Transcriptional regulatory protein, C terminal HCV85_015560 PF00072 Response regulator receiver domain HCV85_015565 PF00512 His Kinase A (phospho-acceptor) domain HCV85_015565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_015565 PF00672 HAMP domain HCV85_015570 PF02683 Cytochrome C biogenesis protein transmembrane region HCV85_015570 PF17991 Thioredoxin like C-terminal domain HCV85_015570 PF00578 AhpC/TSA family HCV85_015580 PF00282 Pyridoxal-dependent decarboxylase conserved domain HCV85_015585 PF00202 Aminotransferase class-III HCV85_015590 PF09084 NMT1/THI5 like HCV85_015595 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_015600 PF00005 ABC transporter HCV85_015605 PF03070 TENA/THI-4/PQQC family HCV85_015620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_015620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_015630 PF00356 Bacterial regulatory proteins, lacI family HCV85_015635 PF00990 Diguanylate cyclase, GGDEF domain HCV85_015635 PF08448 PAS fold HCV85_015640 PF01979 Amidohydrolase family HCV85_015645 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCV85_015655 PF01177 Asp/Glu/Hydantoin racemase HCV85_015680 PF00300 Histidine phosphatase superfamily (branch 1) HCV85_015685 PF01965 DJ-1/PfpI family HCV85_015695 PF02525 Flavodoxin-like fold HCV85_015705 PF00117 Glutamine amidotransferase class-I HCV85_015710 PF02311 AraC-like ligand binding domain HCV85_015710 PF12833 Helix-turn-helix domain HCV85_015725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015725 PF03466 LysR substrate binding domain HCV85_015740 PF02801 Beta-ketoacyl synthase, C-terminal domain HCV85_015740 PF00109 Beta-ketoacyl synthase, N-terminal domain HCV85_015745 PF07690 Major Facilitator Superfamily HCV85_015765 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV85_015765 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV85_015780 PF01425 Amidase HCV85_015805 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_015810 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_015815 PF00005 ABC transporter HCV85_015820 PF00266 Aminotransferase class-V HCV85_015825 PF07687 Peptidase dimerisation domain HCV85_015825 PF01546 Peptidase family M20/M25/M40 HCV85_015830 PF03060 Nitronate monooxygenase HCV85_015835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015835 PF03466 LysR substrate binding domain HCV85_015845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV85_015850 PF13454 FAD-NAD(P)-binding HCV85_015855 PF00083 Sugar (and other) transporter HCV85_015855 PF07690 Major Facilitator Superfamily HCV85_015870 PF00440 Bacterial regulatory proteins, tetR family HCV85_015885 PF07690 Major Facilitator Superfamily HCV85_015895 PF00356 Bacterial regulatory proteins, lacI family HCV85_015900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_015910 PF03611 PTS system sugar-specific permease component HCV85_015915 PF00834 Ribulose-phosphate 3 epimerase family HCV85_015925 PF13737 Transposase DDE domain HCV85_015930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_015935 PF02378 Phosphotransferase system, EIIC HCV85_015935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_015940 PF01810 LysE type translocator HCV85_015950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015950 PF03466 LysR substrate binding domain HCV85_015955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_015955 PF03466 LysR substrate binding domain HCV85_015960 PF00753 Metallo-beta-lactamase superfamily HCV85_015970 PF07687 Peptidase dimerisation domain HCV85_015970 PF01546 Peptidase family M20/M25/M40 HCV85_015980 PF02126 Phosphotriesterase family HCV85_015985 PF02653 Branched-chain amino acid transport system / permease component HCV85_015990 PF00005 ABC transporter HCV85_015995 PF00356 Bacterial regulatory proteins, lacI family HCV85_016005 PF00294 pfkB family carbohydrate kinase HCV85_016025 PF04972 BON domain HCV85_016025 PF01476 LysM domain HCV85_016030 PF07690 Major Facilitator Superfamily HCV85_016040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_016040 PF00672 HAMP domain HCV85_016040 PF00512 His Kinase A (phospho-acceptor) domain HCV85_016045 PF00072 Response regulator receiver domain HCV85_016045 PF02954 Bacterial regulatory protein, Fis family HCV85_016045 PF14532 Sigma-54 interaction domain HCV85_016050 PF13673 Acetyltransferase (GNAT) domain HCV85_016050 PF04229 GrpB protein HCV85_016055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_016055 PF03466 LysR substrate binding domain HCV85_016060 PF00248 Aldo/keto reductase family HCV85_016065 PF00248 Aldo/keto reductase family HCV85_016070 PF08450 SMP-30/Gluconolactonase/LRE-like region HCV85_016075 PF00248 Aldo/keto reductase family HCV85_016095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCV85_016095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCV85_016100 PF12833 Helix-turn-helix domain HCV85_016100 PF01965 DJ-1/PfpI family HCV85_016110 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HCV85_016125 PF00455 DeoR C terminal sensor domain HCV85_016125 PF08220 DeoR-like helix-turn-helix domain HCV85_016130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_016130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_016135 PF01791 DeoC/LacD family aldolase HCV85_016140 PF08220 DeoR-like helix-turn-helix domain HCV85_016140 PF00455 DeoR C terminal sensor domain HCV85_016145 PF00834 Ribulose-phosphate 3 epimerase family HCV85_016150 PF00294 pfkB family carbohydrate kinase HCV85_016155 PF07690 Major Facilitator Superfamily HCV85_016165 PF00501 AMP-binding enzyme HCV85_016165 PF13193 AMP-binding enzyme C-terminal domain HCV85_016170 PF01144 Coenzyme A transferase HCV85_016180 PF02803 Thiolase, C-terminal domain HCV85_016180 PF00108 Thiolase, N-terminal domain HCV85_016185 PF07690 Major Facilitator Superfamily HCV85_016190 PF08450 SMP-30/Gluconolactonase/LRE-like region HCV85_016200 PF02595 Glycerate kinase family HCV85_016205 PF05651 Putative sugar diacid recognition HCV85_016205 PF17853 GGDEF-like domain HCV85_016205 PF13556 PucR C-terminal helix-turn-helix domain HCV85_016210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCV85_016210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV85_016215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_016215 PF03466 LysR substrate binding domain HCV85_016225 PF07729 FCD domain HCV85_016225 PF00392 Bacterial regulatory proteins, gntR family HCV85_016230 PF02378 Phosphotransferase system, EIIC HCV85_016230 PF00367 phosphotransferase system, EIIB HCV85_016235 PF02056 Family 4 glycosyl hydrolase HCV85_016235 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV85_016240 PF00083 Sugar (and other) transporter HCV85_016245 PF00381 PTS HPr component phosphorylation site HCV85_016245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_016260 PF00756 Putative esterase HCV85_016265 PF00563 EAL domain HCV85_016265 PF13188 PAS domain HCV85_016265 PF03707 Bacterial signalling protein N terminal repeat HCV85_016265 PF00990 Diguanylate cyclase, GGDEF domain HCV85_016280 PF00557 Metallopeptidase family M24 HCV85_016295 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV85_016295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV85_016300 PF13953 PapC C-terminal domain HCV85_016300 PF13954 PapC N-terminal domain HCV85_016300 PF00577 Outer membrane usher protein HCV85_016310 PF02638 Glycosyl hydrolase-like 10 HCV85_016315 PF07804 HipA-like C-terminal domain HCV85_016315 PF13657 HipA N-terminal domain HCV85_016320 PF01381 Helix-turn-helix HCV85_016325 PF00576 HIUase/Transthyretin family HCV85_016330 PF09349 OHCU decarboxylase HCV85_016330 PF01014 Uricase HCV85_016335 PF00860 Permease family HCV85_016340 PF01494 FAD binding domain HCV85_016345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_016345 PF03466 LysR substrate binding domain HCV85_016350 PF00355 Rieske [2Fe-2S] domain HCV85_016355 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_016360 PF07690 Major Facilitator Superfamily HCV85_016365 PF12833 Helix-turn-helix domain HCV85_016380 PF09905 DNA-binding protein VF530 HCV85_016390 PF03180 NLPA lipoprotein HCV85_016395 PF09383 NIL domain HCV85_016395 PF00005 ABC transporter HCV85_016400 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_016405 PF03060 Nitronate monooxygenase HCV85_016410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_016410 PF03466 LysR substrate binding domain HCV85_016415 PF06779 Uncharacterised MFS-type transporter YbfB HCV85_016425 PF07690 Major Facilitator Superfamily HCV85_016435 PF13649 Methyltransferase domain HCV85_016470 PF00583 Acetyltransferase (GNAT) family HCV85_016475 PF01232 Mannitol dehydrogenase Rossmann domain HCV85_016475 PF08125 Mannitol dehydrogenase C-terminal domain HCV85_016485 PF00990 Diguanylate cyclase, GGDEF domain HCV85_016490 PF13811 Domain of unknown function (DUF4186) HCV85_016495 PF04960 Glutaminase HCV85_016500 PF00171 Aldehyde dehydrogenase family HCV85_016505 PF03466 LysR substrate binding domain HCV85_016505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_016510 PF00583 Acetyltransferase (GNAT) family HCV85_016515 PF00056 lactate/malate dehydrogenase, NAD binding domain HCV85_016515 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCV85_016520 PF00455 DeoR C terminal sensor domain HCV85_016520 PF08220 DeoR-like helix-turn-helix domain HCV85_016525 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HCV85_016530 PF07005 Sugar-binding N-terminal domain HCV85_016530 PF17042 Nucleotide-binding C-terminal domain HCV85_016535 PF00465 Iron-containing alcohol dehydrogenase HCV85_016540 PF00701 Dihydrodipicolinate synthetase family HCV85_016555 PF04074 YhcH/YjgK/YiaL HCV85_016565 PF02567 Phenazine biosynthesis-like protein HCV85_016570 PF07690 Major Facilitator Superfamily HCV85_016575 PF01914 MarC family integral membrane protein HCV85_016585 PF01047 MarR family HCV85_016590 PF12833 Helix-turn-helix domain HCV85_016595 PF13999 MarB protein HCV85_016600 PF00892 EamA-like transporter family HCV85_016605 PF07690 Major Facilitator Superfamily HCV85_016615 PF00005 ABC transporter HCV85_016620 PF00005 ABC transporter HCV85_016625 PF02653 Branched-chain amino acid transport system / permease component HCV85_016630 PF02653 Branched-chain amino acid transport system / permease component HCV85_016635 PF13458 Periplasmic binding protein HCV85_016640 PF01717 Cobalamin-independent synthase, Catalytic domain HCV85_016650 PF12833 Helix-turn-helix domain HCV85_016650 PF01965 DJ-1/PfpI family HCV85_016665 PF00356 Bacterial regulatory proteins, lacI family HCV85_016670 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HCV85_016670 PF00703 Glycosyl hydrolases family 2 HCV85_016670 PF02929 Beta galactosidase small chain HCV85_016670 PF02837 Glycosyl hydrolases family 2, sugar binding domain HCV85_016670 PF16353 Domain of unknown function(DUF4981) HCV85_016675 PF01306 LacY proton/sugar symporter HCV85_016680 PF02463 RecF/RecN/SMC N terminal domain HCV85_016695 PF08220 DeoR-like helix-turn-helix domain HCV85_016695 PF00455 DeoR C terminal sensor domain HCV85_016700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV85_016700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCV85_016705 PF07005 Sugar-binding N-terminal domain HCV85_016705 PF17042 Nucleotide-binding C-terminal domain HCV85_016710 PF00596 Class II Aldolase and Adducin N-terminal domain HCV85_016715 PF01261 Xylose isomerase-like TIM barrel HCV85_016720 PF02447 GntP family permease HCV85_016725 PF12833 Helix-turn-helix domain HCV85_016730 PF05598 Transposase domain (DUF772) HCV85_016730 PF01609 Transposase DDE domain HCV85_016740 PF04239 Protein of unknown function (DUF421) HCV85_016745 PF00106 short chain dehydrogenase HCV85_016750 PF16657 Maltogenic Amylase, C-terminal domain HCV85_016750 PF00128 Alpha amylase, catalytic domain HCV85_016760 PF05974 Domain of unknown function (DUF892) HCV85_016770 PF10685 Stress-induced bacterial acidophilic repeat motif HCV85_016780 PF10820 Protein of unknown function (DUF2543) HCV85_016785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_016785 PF03466 LysR substrate binding domain HCV85_016795 PF08136 30S ribosomal protein subunit S22 family HCV85_016805 PF00390 Malic enzyme, N-terminal domain HCV85_016805 PF03949 Malic enzyme, NAD binding domain HCV85_016815 PF00005 ABC transporter HCV85_016815 PF12848 ABC transporter HCV85_016825 PF00719 Inorganic pyrophosphatase HCV85_016830 PF00107 Zinc-binding dehydrogenase HCV85_016830 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_016835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_016840 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_016845 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_016845 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_016850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_016850 PF00005 ABC transporter HCV85_016855 PF00296 Luciferase-like monooxygenase HCV85_016865 PF07690 Major Facilitator Superfamily HCV85_016875 PF03976 Polyphosphate kinase 2 (PPK2) HCV85_016890 PF01292 Prokaryotic cytochrome b561 HCV85_016895 PF13247 4Fe-4S dicluster domain HCV85_016895 PF09163 Formate dehydrogenase N, transmembrane HCV85_016895 PF12800 4Fe-4S binding domain HCV85_016905 PF00892 EamA-like transporter family HCV85_016910 PF00106 short chain dehydrogenase HCV85_016915 PF00970 Oxidoreductase FAD-binding domain HCV85_016915 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_016915 PF00175 Oxidoreductase NAD-binding domain HCV85_016920 PF00866 Ring hydroxylating beta subunit HCV85_016925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HCV85_016925 PF00355 Rieske [2Fe-2S] domain HCV85_016930 PF04444 Catechol dioxygenase N terminus HCV85_016930 PF00775 Dioxygenase HCV85_016935 PF02426 Muconolactone delta-isomerase HCV85_016940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCV85_016940 PF13378 Enolase C-terminal domain-like HCV85_016945 PF09339 IclR helix-turn-helix domain HCV85_016945 PF01614 Bacterial transcriptional regulator HCV85_016950 PF07690 Major Facilitator Superfamily HCV85_016960 PF07690 Major Facilitator Superfamily HCV85_016965 PF14710 Respiratory nitrate reductase alpha N-terminal HCV85_016965 PF01568 Molydopterin dinucleotide binding domain HCV85_016965 PF00384 Molybdopterin oxidoreductase HCV85_016970 PF14711 Respiratory nitrate reductase beta C-terminal HCV85_016970 PF13247 4Fe-4S dicluster domain HCV85_016975 PF02613 Nitrate reductase delta subunit HCV85_016980 PF02665 Nitrate reductase gamma subunit HCV85_016985 PF00797 N-acetyltransferase HCV85_016990 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_017000 PF00005 ABC transporter HCV85_017000 PF17912 MalK OB fold domain HCV85_017005 PF01613 Flavin reductase like domain HCV85_017010 PF02311 AraC-like ligand binding domain HCV85_017010 PF12833 Helix-turn-helix domain HCV85_017025 PF02264 LamB porin HCV85_017025 PF11471 Maltoporin periplasmic N-terminal extension HCV85_017030 PF01361 Tautomerase enzyme HCV85_017035 PF13417 Glutathione S-transferase, N-terminal domain HCV85_017045 PF00005 ABC transporter HCV85_017050 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_017060 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_017065 PF00296 Luciferase-like monooxygenase HCV85_017070 PF01546 Peptidase family M20/M25/M40 HCV85_017070 PF07687 Peptidase dimerisation domain HCV85_017075 PF00296 Luciferase-like monooxygenase HCV85_017080 PF01202 Shikimate kinase HCV85_017085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017085 PF03466 LysR substrate binding domain HCV85_017090 PF00324 Amino acid permease HCV85_017105 PF07715 TonB-dependent Receptor Plug Domain HCV85_017105 PF00593 TonB dependent receptor HCV85_017110 PF01979 Amidohydrolase family HCV85_017115 PF04175 Protein of unknown function (DUF406) HCV85_017125 PF01156 Inosine-uridine preferring nucleoside hydrolase HCV85_017130 PF16884 N-terminal domain of oxidoreductase HCV85_017130 PF00107 Zinc-binding dehydrogenase HCV85_017135 PF01381 Helix-turn-helix HCV85_017135 PF08671 Anti-repressor SinI HCV85_017140 PF00583 Acetyltransferase (GNAT) family HCV85_017145 PF04657 Putative inner membrane exporter, YdcZ HCV85_017150 PF10735 Protein of unknown function (DUF2526) HCV85_017155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_017160 PF00171 Aldehyde dehydrogenase family HCV85_017165 PF00561 alpha/beta hydrolase fold HCV85_017165 PF00364 Biotin-requiring enzyme HCV85_017170 PF10753 Toxin GhoT_OrtT HCV85_017195 PF00171 Aldehyde dehydrogenase family HCV85_017200 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_017205 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_017210 PF08402 TOBE domain HCV85_017210 PF00005 ABC transporter HCV85_017215 PF13416 Bacterial extracellular solute-binding protein HCV85_017220 PF00392 Bacterial regulatory proteins, gntR family HCV85_017220 PF00155 Aminotransferase class I and II HCV85_017225 PF01654 Cytochrome bd terminal oxidase subunit I HCV85_017230 PF02322 Cytochrome bd terminal oxidase subunit II HCV85_017250 PF12392 Collagenase HCV85_017250 PF01136 Peptidase family U32 HCV85_017260 PF01381 Helix-turn-helix HCV85_017260 PF07883 Cupin domain HCV85_017265 PF03594 Benzoate membrane transport protein HCV85_017270 PF12833 Helix-turn-helix domain HCV85_017270 PF06445 GyrI-like small molecule binding domain HCV85_017280 PF11769 Protein of unknown function (DUF3313) HCV85_017285 PF03848 Tellurite resistance protein TehB HCV85_017290 PF03595 Voltage-dependent anion channel HCV85_017295 PF18836 Beta solenoid repeat from YDCK HCV85_017300 PF13302 Acetyltransferase (GNAT) domain HCV85_017305 PF04349 Periplasmic glucan biosynthesis protein, MdoG HCV85_017310 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_017310 PF00107 Zinc-binding dehydrogenase HCV85_017315 PF00135 Carboxylesterase family HCV85_017320 PF07063 Domain of unknown function (DUF1338) HCV85_017325 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HCV85_017325 PF00775 Dioxygenase HCV85_017330 PF00775 Dioxygenase HCV85_017335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017335 PF03466 LysR substrate binding domain HCV85_017340 PF01011 PQQ enzyme repeat HCV85_017345 PF00107 Zinc-binding dehydrogenase HCV85_017345 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_017350 PF02583 Metal-sensitive transcriptional repressor HCV85_017355 PF01292 Prokaryotic cytochrome b561 HCV85_017370 PF01638 HxlR-like helix-turn-helix HCV85_017375 PF07690 Major Facilitator Superfamily HCV85_017380 PF00962 Adenosine/AMP deaminase HCV85_017385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_017385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_017395 PF00232 Glycosyl hydrolase family 1 HCV85_017400 PF05321 Haemolysin expression modulating protein HCV85_017405 PF10754 Protein of unknown function (DUF2569) HCV85_017410 PF02508 Rnf-Nqr subunit, membrane protein HCV85_017415 PF04060 Putative Fe-S cluster HCV85_017420 PF10531 SLBB domain HCV85_017420 PF12838 4Fe-4S dicluster domain HCV85_017420 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HCV85_017420 PF13375 RnfC Barrel sandwich hybrid domain HCV85_017425 PF03116 NQR2, RnfD, RnfE family HCV85_017430 PF04205 FMN-binding domain HCV85_017435 PF02508 Rnf-Nqr subunit, membrane protein HCV85_017440 PF00730 HhH-GPD superfamily base excision DNA repair protein HCV85_017440 PF10576 Iron-sulfur binding domain of endonuclease III HCV85_017440 PF00633 Helix-hairpin-helix motif HCV85_017445 PF00854 POT family HCV85_017450 PF00043 Glutathione S-transferase, C-terminal domain HCV85_017450 PF02798 Glutathione S-transferase, N-terminal domain HCV85_017455 PF08543 Phosphomethylpyrimidine kinase HCV85_017460 PF00579 tRNA synthetases class I (W and Y) HCV85_017465 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HCV85_017465 PF01243 Pyridoxamine 5'-phosphate oxidase HCV85_017470 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HCV85_017475 PF03702 Anhydro-N-acetylmuramic acid kinase HCV85_017480 PF05433 Glycine zipper 2TM domain HCV85_017485 PF17158 Membrane-associated sensor, integral membrane domain HCV85_017485 PF00990 Diguanylate cyclase, GGDEF domain HCV85_017490 PF01047 MarR family HCV85_017495 PF07869 Protein of unknown function (DUF1656) HCV85_017500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_017500 PF00529 HlyD membrane-fusion protein of T1SS HCV85_017505 PF04632 Fusaric acid resistance protein family HCV85_017510 PF00080 Copper/zinc superoxide dismutase (SODC) HCV85_017515 PF00248 Aldo/keto reductase family HCV85_017520 PF06945 Protein of unknown function (DUF1289) HCV85_017525 PF16925 Tetracyclin repressor-like, C-terminal domain HCV85_017525 PF00440 Bacterial regulatory proteins, tetR family HCV85_017530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV85_017535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV85_017540 PF00929 Exonuclease HCV85_017545 PF00462 Glutaredoxin HCV85_017550 PF00877 NlpC/P60 family HCV85_017560 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCV85_017560 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCV85_017565 PF07690 Major Facilitator Superfamily HCV85_017575 PF00356 Bacterial regulatory proteins, lacI family HCV85_017580 PF03466 LysR substrate binding domain HCV85_017580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017585 PF07690 Major Facilitator Superfamily HCV85_017595 PF00677 Lumazine binding domain HCV85_017600 PF01554 MatE HCV85_017610 PF03641 Possible lysine decarboxylase HCV85_017640 PF03466 LysR substrate binding domain HCV85_017640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017650 PF10996 Beta-Casp domain HCV85_017650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HCV85_017650 PF00753 Metallo-beta-lactamase superfamily HCV85_017675 PF00484 Carbonic anhydrase HCV85_017685 PF08220 DeoR-like helix-turn-helix domain HCV85_017685 PF00455 DeoR C terminal sensor domain HCV85_017690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV85_017700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_017705 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_017710 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_017715 PF00005 ABC transporter HCV85_017715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_017720 PF00005 ABC transporter HCV85_017720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_017740 PF07690 Major Facilitator Superfamily HCV85_017745 PF03466 LysR substrate binding domain HCV85_017745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017755 PF01979 Amidohydrolase family HCV85_017765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017765 PF03466 LysR substrate binding domain HCV85_017770 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_017775 PF07969 Amidohydrolase family HCV85_017780 PF01042 Endoribonuclease L-PSP HCV85_017785 PF02633 Creatinine amidohydrolase HCV85_017795 PF00005 ABC transporter HCV85_017800 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_017805 PF01565 FAD binding domain HCV85_017805 PF02913 FAD linked oxidases, C-terminal domain HCV85_017830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017830 PF03466 LysR substrate binding domain HCV85_017835 PF01144 Coenzyme A transferase HCV85_017840 PF01144 Coenzyme A transferase HCV85_017845 PF00108 Thiolase, N-terminal domain HCV85_017845 PF02803 Thiolase, C-terminal domain HCV85_017850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV85_017850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV85_017860 PF00106 short chain dehydrogenase HCV85_017865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_017865 PF03466 LysR substrate binding domain HCV85_017870 PF03306 Alpha-acetolactate decarboxylase HCV85_017875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_017875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_017875 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_017880 PF00106 short chain dehydrogenase HCV85_017890 PF00873 AcrB/AcrD/AcrF family HCV85_017905 PF00486 Transcriptional regulatory protein, C terminal HCV85_017905 PF00072 Response regulator receiver domain HCV85_017910 PF00672 HAMP domain HCV85_017910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_017910 PF00512 His Kinase A (phospho-acceptor) domain HCV85_017925 PF03544 Gram-negative bacterial TonB protein C-terminal HCV85_017945 PF03918 Cytochrome C biogenesis protein HCV85_017950 PF08534 Redoxin HCV85_017955 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HCV85_017955 PF01578 Cytochrome C assembly protein HCV85_017960 PF03100 CcmE HCV85_017970 PF01578 Cytochrome C assembly protein HCV85_017975 PF03379 CcmB protein HCV85_017980 PF00005 ABC transporter HCV85_017985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCV85_017985 PF00034 Cytochrome c HCV85_017990 PF05199 GMC oxidoreductase HCV85_017990 PF00732 GMC oxidoreductase HCV85_017995 PF13618 Gluconate 2-dehydrogenase subunit 3 HCV85_018005 PF00005 ABC transporter HCV85_018005 PF08402 TOBE domain HCV85_018010 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_018020 PF02615 Malate/L-lactate dehydrogenase HCV85_018025 PF01568 Molydopterin dinucleotide binding domain HCV85_018025 PF00384 Molybdopterin oxidoreductase HCV85_018025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV85_018050 PF07690 Major Facilitator Superfamily HCV85_018065 PF00005 ABC transporter HCV85_018070 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_018075 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_018090 PF01032 FecCD transport family HCV85_018095 PF01032 FecCD transport family HCV85_018100 PF00005 ABC transporter HCV85_018105 PF07715 TonB-dependent Receptor Plug Domain HCV85_018110 PF00005 ABC transporter HCV85_018115 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_018135 PF00296 Luciferase-like monooxygenase HCV85_018140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_018140 PF03466 LysR substrate binding domain HCV85_018145 PF05995 Cysteine dioxygenase type I HCV85_018155 PF02578 Multi-copper polyphenol oxidoreductase laccase HCV85_018160 PF07690 Major Facilitator Superfamily HCV85_018165 PF00682 HMGL-like HCV85_018165 PF07836 DmpG-like communication domain HCV85_018170 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV85_018170 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HCV85_018175 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV85_018180 PF12697 Alpha/beta hydrolase family HCV85_018185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HCV85_018190 PF01494 FAD binding domain HCV85_018195 PF09339 IclR helix-turn-helix domain HCV85_018195 PF01614 Bacterial transcriptional regulator HCV85_018200 PF01497 Periplasmic binding protein HCV85_018205 PF01032 FecCD transport family HCV85_018210 PF00005 ABC transporter HCV85_018220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV85_018220 PF01488 Shikimate / quinate 5-dehydrogenase HCV85_018220 PF08501 Shikimate dehydrogenase substrate binding domain HCV85_018225 PF07690 Major Facilitator Superfamily HCV85_018230 PF01261 Xylose isomerase-like TIM barrel HCV85_018230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV85_018235 PF00440 Bacterial regulatory proteins, tetR family HCV85_018235 PF17926 Tetracyclin repressor-like, C-terminal domain HCV85_018240 PF10965 Protein of unknown function (DUF2767) HCV85_018255 PF00224 Pyruvate kinase, barrel domain HCV85_018255 PF02887 Pyruvate kinase, alpha/beta domain HCV85_018260 PF04728 Lipoprotein leucine-zipper HCV85_018265 PF01476 LysM domain HCV85_018265 PF17969 L,D-transpeptidase C-terminal domain HCV85_018265 PF03734 L,D-transpeptidase catalytic domain HCV85_018270 PF02657 Fe-S metabolism associated domain HCV85_018275 PF00266 Aminotransferase class-V HCV85_018280 PF01458 Uncharacterized protein family (UPF0051) HCV85_018285 PF00005 ABC transporter HCV85_018290 PF01458 Uncharacterized protein family (UPF0051) HCV85_018295 PF01521 Iron-sulphur cluster biosynthesis HCV85_018315 PF00440 Bacterial regulatory proteins, tetR family HCV85_018320 PF01070 FMN-dependent dehydrogenase HCV85_018325 PF00873 AcrB/AcrD/AcrF family HCV85_018345 PF03466 LysR substrate binding domain HCV85_018345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_018355 PF01032 FecCD transport family HCV85_018360 PF00005 ABC transporter HCV85_018365 PF07690 Major Facilitator Superfamily HCV85_018370 PF01717 Cobalamin-independent synthase, Catalytic domain HCV85_018370 PF08267 Cobalamin-independent synthase, N-terminal domain HCV85_018385 PF04226 Transglycosylase associated protein HCV85_018390 PF03061 Thioesterase superfamily HCV85_018395 PF02913 FAD linked oxidases, C-terminal domain HCV85_018395 PF13183 4Fe-4S dicluster domain HCV85_018395 PF01565 FAD binding domain HCV85_018400 PF01594 AI-2E family transporter HCV85_018410 PF00391 PEP-utilising enzyme, mobile domain HCV85_018410 PF02896 PEP-utilising enzyme, TIM barrel domain HCV85_018410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HCV85_018420 PF03618 Kinase/pyrophosphorylase HCV85_018425 PF00793 DAHP synthetase I family HCV85_018430 PF10636 Hemin uptake protein hemP HCV85_018435 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HCV85_018440 PF00877 NlpC/P60 family HCV85_018445 PF00005 ABC transporter HCV85_018450 PF00255 Glutathione peroxidase HCV85_018455 PF03180 NLPA lipoprotein HCV85_018460 PF01032 FecCD transport family HCV85_018470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_018470 PF03466 LysR substrate binding domain HCV85_018475 PF01266 FAD dependent oxidoreductase HCV85_018485 PF00216 Bacterial DNA-binding protein HCV85_018490 PF03147 Ferredoxin-fold anticodon binding domain HCV85_018490 PF03484 tRNA synthetase B5 domain HCV85_018490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HCV85_018490 PF03483 B3/4 domain HCV85_018490 PF01588 Putative tRNA binding domain HCV85_018495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HCV85_018495 PF01409 tRNA synthetases class II core domain (F) HCV85_018505 PF00453 Ribosomal protein L20 HCV85_018510 PF01632 Ribosomal protein L35 HCV85_018515 PF00707 Translation initiation factor IF-3, C-terminal domain HCV85_018515 PF05198 Translation initiation factor IF-3, N-terminal domain HCV85_018520 PF02824 TGS domain HCV85_018520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCV85_018520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCV85_018520 PF03129 Anticodon binding domain HCV85_018530 PF04338 Protein of unknown function, DUF481 HCV85_018535 PF00294 pfkB family carbohydrate kinase HCV85_018540 PF11080 Endoribonuclease GhoS HCV85_018545 PF03881 Fructosamine kinase HCV85_018550 PF03544 Gram-negative bacterial TonB protein C-terminal HCV85_018555 PF03795 YCII-related domain HCV85_018565 PF04264 YceI-like domain HCV85_018575 PF13396 Phospholipase_D-nuclease N-terminal HCV85_018575 PF13091 PLD-like domain HCV85_018580 PF04269 Protein of unknown function, DUF440 HCV85_018585 PF00027 Cyclic nucleotide-binding domain HCV85_018585 PF00520 Ion transport protein HCV85_018590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_018590 PF00005 ABC transporter HCV85_018595 PF00005 ABC transporter HCV85_018595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCV85_018600 PF12911 N-terminal TM domain of oligopeptide transport permease C HCV85_018600 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_018605 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_018610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_018615 PF01914 MarC family integral membrane protein HCV85_018625 PF00465 Iron-containing alcohol dehydrogenase HCV85_018625 PF00171 Aldehyde dehydrogenase family HCV85_018630 PF00265 Thymidine kinase HCV85_018640 PF00816 H-NS histone family HCV85_018645 PF00483 Nucleotidyl transferase HCV85_018650 PF00072 Response regulator receiver domain HCV85_018655 PF01734 Patatin-like phospholipase HCV85_018660 PF02810 SEC-C motif HCV85_018665 PF01842 ACT domain HCV85_018665 PF00551 Formyl transferase HCV85_018700 PF01037 Lrp/AsnC ligand binding domain HCV85_018710 PF02665 Nitrate reductase gamma subunit HCV85_018715 PF02613 Nitrate reductase delta subunit HCV85_018720 PF14711 Respiratory nitrate reductase beta C-terminal HCV85_018720 PF13247 4Fe-4S dicluster domain HCV85_018725 PF00384 Molybdopterin oxidoreductase HCV85_018725 PF14710 Respiratory nitrate reductase alpha N-terminal HCV85_018725 PF01568 Molydopterin dinucleotide binding domain HCV85_018735 PF07690 Major Facilitator Superfamily HCV85_018740 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HCV85_018740 PF07730 Histidine kinase HCV85_018740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_018740 PF00672 HAMP domain HCV85_018745 PF00072 Response regulator receiver domain HCV85_018745 PF00196 Bacterial regulatory proteins, luxR family HCV85_018750 PF11924 Inverse autotransporter, beta-domain HCV85_018755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCV85_018755 PF04324 BFD-like [2Fe-2S] binding domain HCV85_018755 PF01568 Molydopterin dinucleotide binding domain HCV85_018755 PF00384 Molybdopterin oxidoreductase HCV85_018760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCV85_018760 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_018760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCV85_018760 PF04324 BFD-like [2Fe-2S] binding domain HCV85_018760 PF13806 Rieske-like [2Fe-2S] domain HCV85_018760 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCV85_018765 PF00005 ABC transporter HCV85_018770 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_018780 PF08376 Nitrate and nitrite sensing HCV85_018780 PF03861 ANTAR domain HCV85_018785 PF02635 DsrE/DsrF-like family HCV85_018795 PF04752 ChaC-like protein HCV85_018800 PF06150 ChaB HCV85_018805 PF01699 Sodium/calcium exchanger protein HCV85_018810 PF00793 DAHP synthetase I family HCV85_018815 PF13369 Transglutaminase-like superfamily HCV85_018820 PF04247 Invasion gene expression up-regulator, SirB HCV85_018825 PF17827 PrmC N-terminal domain HCV85_018825 PF13847 Methyltransferase domain HCV85_018830 PF03462 PCRF domain HCV85_018830 PF00472 RF-1 domain HCV85_018835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HCV85_018835 PF01488 Shikimate / quinate 5-dehydrogenase HCV85_018835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HCV85_018840 PF03550 Outer membrane lipoprotein LolB HCV85_018845 PF00288 GHMP kinases N terminal domain HCV85_018845 PF08544 GHMP kinases C terminal HCV85_018850 PF14572 Phosphoribosyl synthetase-associated domain HCV85_018850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HCV85_018855 PF00916 Sulfate permease family HCV85_018855 PF01740 STAS domain HCV85_018865 PF10762 Protein of unknown function (DUF2583) HCV85_018870 PF01195 Peptidyl-tRNA hydrolase HCV85_018875 PF01926 50S ribosome-binding GTPase HCV85_018875 PF06071 Protein of unknown function (DUF933) HCV85_018885 PF13407 Periplasmic binding protein domain HCV85_018940 PF01609 Transposase DDE domain HCV85_018940 PF05598 Transposase domain (DUF772) HCV85_018970 PF03781 Sulfatase-modifying factor enzyme 1 HCV85_019005 PF13737 Transposase DDE domain HCV85_019050 PF00691 OmpA family HCV85_019050 PF13488 Glycine zipper HCV85_019070 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HCV85_019075 PF00849 RNA pseudouridylate synthase HCV85_019085 PF03466 LysR substrate binding domain HCV85_019085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_019095 PF07690 Major Facilitator Superfamily HCV85_019100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_019100 PF03466 LysR substrate binding domain HCV85_019115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_019115 PF03466 LysR substrate binding domain HCV85_019120 PF00005 ABC transporter HCV85_019125 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV85_019125 PF00005 ABC transporter HCV85_019130 PF02653 Branched-chain amino acid transport system / permease component HCV85_019130 PF11862 Domain of unknown function (DUF3382) HCV85_019135 PF02653 Branched-chain amino acid transport system / permease component HCV85_019140 PF13458 Periplasmic binding protein HCV85_019150 PF01228 Glycine radical HCV85_019150 PF02901 Pyruvate formate lyase-like HCV85_019155 PF00871 Acetokinase family HCV85_019160 PF03222 Tryptophan/tyrosine permease family HCV85_019165 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_019170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_019170 PF03466 LysR substrate binding domain HCV85_019210 PF14403 Circularly permuted ATP-grasp type 2 HCV85_019215 PF01204 Trehalase HCV85_019220 PF07715 TonB-dependent Receptor Plug Domain HCV85_019220 PF00593 TonB dependent receptor HCV85_019225 PF01464 Transglycosylase SLT domain HCV85_019230 PF02016 LD-carboxypeptidase N-terminal domain HCV85_019230 PF17676 LD-carboxypeptidase C-terminal domain HCV85_019235 PF03471 Transporter associated domain HCV85_019235 PF02080 TrkA-C domain HCV85_019235 PF00999 Sodium/hydrogen exchanger family HCV85_019240 PF00842 Alanine racemase, C-terminal domain HCV85_019240 PF01168 Alanine racemase, N-terminal domain HCV85_019245 PF01266 FAD dependent oxidoreductase HCV85_019255 PF04293 SpoVR like protein HCV85_019260 PF07840 FadR C-terminal domain HCV85_019260 PF00392 Bacterial regulatory proteins, gntR family HCV85_019265 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HCV85_019270 PF02600 Disulfide bond formation protein DsbB HCV85_019280 PF03692 Putative zinc- or iron-chelating domain HCV85_019285 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV85_019290 PF05166 YcgL domain HCV85_019295 PF03775 Septum formation inhibitor MinC, C-terminal domain HCV85_019295 PF05209 Septum formation inhibitor MinC, N-terminal domain HCV85_019300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HCV85_019305 PF03776 Septum formation topological specificity factor MinE HCV85_019310 PF00570 HRDC domain HCV85_019310 PF01612 3'-5' exonuclease HCV85_019315 PF13193 AMP-binding enzyme C-terminal domain HCV85_019315 PF00501 AMP-binding enzyme HCV85_019320 PF03843 Outer membrane lipoprotein Slp family HCV85_019325 PF00814 Glycoprotease family HCV85_019330 PF04851 Type III restriction enzyme, res subunit HCV85_019330 PF13307 Helicase C-terminal domain HCV85_019335 PF01042 Endoribonuclease L-PSP HCV85_019340 PF03701 Uncharacterised protein family (UPF0181) HCV85_019345 PF00425 chorismate binding enzyme HCV85_019345 PF04715 Anthranilate synthase component I, N terminal region HCV85_019350 PF00293 NUDIX domain HCV85_019355 PF03313 Serine dehydratase alpha chain HCV85_019355 PF03315 Serine dehydratase beta chain HCV85_019360 PF12792 CSS motif domain associated with EAL HCV85_019360 PF00563 EAL domain HCV85_019365 PF03741 Integral membrane protein TerC family HCV85_019365 PF03471 Transporter associated domain HCV85_019370 PF03610 PTS system fructose IIA component HCV85_019370 PF03830 PTS system sorbose subfamily IIB component HCV85_019375 PF03609 PTS system sorbose-specific iic component HCV85_019380 PF03613 PTS system mannose/fructose/sorbose family IID component HCV85_019385 PF06173 Protein of unknown function (DUF986) HCV85_019390 PF02659 Putative manganese efflux pump HCV85_019395 PF13847 Methyltransferase domain HCV85_019400 PF03717 Penicillin-binding Protein dimerisation domain HCV85_019400 PF00905 Penicillin binding protein transpeptidase domain HCV85_019405 PF00313 'Cold-shock' DNA-binding domain HCV85_019410 PF10736 Protein of unknown function (DUF2627) HCV85_019415 PF13974 YebO-like protein HCV85_019420 PF13998 MgrB protein HCV85_019425 PF13996 YobH-like protein HCV85_019430 PF01614 Bacterial transcriptional regulator HCV85_019430 PF09339 IclR helix-turn-helix domain HCV85_019435 PF07690 Major Facilitator Superfamily HCV85_019440 PF01435 Peptidase family M48 HCV85_019445 PF00595 PDZ domain HCV85_019445 PF17804 Tail specific protease N-terminal domain HCV85_019445 PF03572 Peptidase family S41 HCV85_019445 PF11818 C-terminal domain of tail specific protease (DUF3340) HCV85_019450 PF17516 ProQ C-terminal domain HCV85_019450 PF04352 ProQ/FINO family HCV85_019455 PF13185 GAF domain HCV85_019460 PF04403 Paraquat-inducible protein A HCV85_019465 PF02470 MlaD protein HCV85_019470 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HCV85_019470 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HCV85_019470 PF01189 16S rRNA methyltransferase RsmB/F HCV85_019475 PF07351 Protein of unknown function (DUF1480) HCV85_019480 PF07358 Protein of unknown function (DUF1482) HCV85_019485 PF00149 Calcineurin-like phosphoesterase HCV85_019490 PF04393 Protein of unknown function (DUF535) HCV85_019500 PF10709 Protein of unknown function (DUF2511) HCV85_019505 PF05425 Copper resistance protein D HCV85_019510 PF04234 CopC domain HCV85_019515 PF06440 DNA polymerase III, theta subunit HCV85_019520 PF00929 Exonuclease HCV85_019525 PF00326 Prolyl oligopeptidase family HCV85_019525 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HCV85_019530 PF04391 Protein of unknown function (DUF533) HCV85_019535 PF07130 YebG protein HCV85_019540 PF02222 ATP-grasp domain HCV85_019545 PF01081 KDPG and KHG aldolase HCV85_019550 PF00920 Dehydratase family HCV85_019555 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HCV85_019555 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HCV85_019565 PF01418 Helix-turn-helix domain, rpiR family HCV85_019565 PF01380 SIS domain HCV85_019570 PF00224 Pyruvate kinase, barrel domain HCV85_019570 PF02887 Pyruvate kinase, alpha/beta domain HCV85_019575 PF03279 Bacterial lipid A biosynthesis acyltransferase HCV85_019580 PF01476 LysM domain HCV85_019580 PF08525 Opacity-associated protein A N-terminal motif HCV85_019580 PF01551 Peptidase family M23 HCV85_019585 PF01297 Zinc-uptake complex component A periplasmic HCV85_019590 PF00005 ABC transporter HCV85_019595 PF00950 ABC 3 transport family HCV85_019600 PF05496 Holliday junction DNA helicase RuvB P-loop domain HCV85_019600 PF17864 RuvB AAA lid domain HCV85_019600 PF05491 RuvB C-terminal winged helix domain HCV85_019605 PF07499 RuvA, C-terminal domain HCV85_019605 PF01330 RuvA N terminal domain HCV85_019610 PF02075 Crossover junction endodeoxyribonuclease RuvC HCV85_019615 PF01709 Transcriptional regulator HCV85_019620 PF00293 NUDIX domain HCV85_019625 PF02938 GAD domain HCV85_019625 PF00152 tRNA synthetases class II (D, K and N) HCV85_019625 PF01336 OB-fold nucleic acid binding domain HCV85_019630 PF00857 Isochorismatase family HCV85_019635 PF01904 Protein of unknown function DUF72 HCV85_019640 PF01124 MAPEG family HCV85_019645 PF13649 Methyltransferase domain HCV85_019650 PF08003 Protein of unknown function (DUF1698) HCV85_019655 PF03932 CutC family HCV85_019660 PF06185 YecM protein HCV85_019665 PF05746 DALR anticodon binding domain HCV85_019665 PF03485 Arginyl tRNA synthetase N terminal domain HCV85_019665 PF00750 tRNA synthetases class I (R) HCV85_019670 PF07470 Glycosyl Hydrolase Family 88 HCV85_019680 PF00582 Universal stress protein family HCV85_019685 PF00982 Glycosyltransferase family 20 HCV85_019690 PF02358 Trehalose-phosphatase HCV85_019695 PF02653 Branched-chain amino acid transport system / permease component HCV85_019700 PF00005 ABC transporter HCV85_019705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV85_019715 PF00210 Ferritin-like domain HCV85_019730 PF10964 Protein of unknown function (DUF2766) HCV85_019735 PF07690 Major Facilitator Superfamily HCV85_019750 PF00210 Ferritin-like domain HCV85_019755 PF10678 Protein of unknown function (DUF2492) HCV85_019760 PF03222 Tryptophan/tyrosine permease family HCV85_019765 PF03695 Uncharacterised protein family (UPF0149) HCV85_019765 PF02810 SEC-C motif HCV85_019770 PF00701 Dihydrodipicolinate synthetase family HCV85_019790 PF01066 CDP-alcohol phosphatidyltransferase HCV85_019795 PF08459 UvrC Helix-hairpin-helix N-terminal HCV85_019795 PF02151 UvrB/uvrC motif HCV85_019795 PF01541 GIY-YIG catalytic domain HCV85_019800 PF00072 Response regulator receiver domain HCV85_019800 PF00196 Bacterial regulatory proteins, luxR family HCV85_019805 PF10769 Protein of unknown function (DUF2594) HCV85_019810 PF00196 Bacterial regulatory proteins, luxR family HCV85_019810 PF03472 Autoinducer binding domain HCV85_019815 PF00005 ABC transporter HCV85_019820 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_019825 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_019830 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_019835 PF02806 Alpha amylase, C-terminal all-beta domain HCV85_019835 PF00128 Alpha amylase, catalytic domain HCV85_019840 PF13987 YedD-like protein HCV85_019845 PF00196 Bacterial regulatory proteins, luxR family HCV85_019850 PF10781 Dextransucrase DSRB HCV85_019855 PF10733 Protein of unknown function (DUF2525) HCV85_019860 PF00990 Diguanylate cyclase, GGDEF domain HCV85_019860 PF17151 Periplasmic sensor domain HCV85_019865 PF05661 Protein of unknown function (DUF808) HCV85_019870 PF00892 EamA-like transporter family HCV85_019875 PF03852 DNA mismatch endonuclease Vsr HCV85_019880 PF00145 C-5 cytosine-specific DNA methylase HCV85_019880 PF18284 DNA methylase N-terminal domain HCV85_019885 PF01966 HD domain HCV85_019895 PF00267 Gram-negative porin HCV85_019905 PF06167 Glucose-regulated metallo-peptidase M90 HCV85_019915 PF01042 Endoribonuclease L-PSP HCV85_019920 PF03466 LysR substrate binding domain HCV85_019920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_019930 PF03734 L,D-transpeptidase catalytic domain HCV85_019930 PF17969 L,D-transpeptidase C-terminal domain HCV85_019935 PF03466 LysR substrate binding domain HCV85_019935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_019940 PF03466 LysR substrate binding domain HCV85_019940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_019950 PF00999 Sodium/hydrogen exchanger family HCV85_019955 PF00440 Bacterial regulatory proteins, tetR family HCV85_019955 PF16925 Tetracyclin repressor-like, C-terminal domain HCV85_019960 PF00107 Zinc-binding dehydrogenase HCV85_019960 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_019970 PF12146 Serine aminopeptidase, S33 HCV85_019980 PF01048 Phosphorylase superfamily HCV85_019980 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HCV85_019990 PF01554 MatE HCV85_020000 PF13356 Arm DNA-binding domain HCV85_020000 PF00589 Phage integrase family HCV85_020010 PF18273 Type III R-M EcoP15I C-terminal domain HCV85_020010 PF01555 DNA methylase HCV85_020015 PF04851 Type III restriction enzyme, res subunit HCV85_020015 PF08774 VRR-NUC domain HCV85_020105 PF00816 H-NS histone family HCV85_020145 PF00990 Diguanylate cyclase, GGDEF domain HCV85_020150 PF00561 alpha/beta hydrolase fold HCV85_020160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_020160 PF03466 LysR substrate binding domain HCV85_020165 PF08956 Domain of unknown function (DUF1869) HCV85_020170 PF09313 Domain of unknown function (DUF1971) HCV85_020180 PF00563 EAL domain HCV85_020180 PF03707 Bacterial signalling protein N terminal repeat HCV85_020180 PF13188 PAS domain HCV85_020180 PF00990 Diguanylate cyclase, GGDEF domain HCV85_020190 PF07690 Major Facilitator Superfamily HCV85_020190 PF00083 Sugar (and other) transporter HCV85_020200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_020200 PF03466 LysR substrate binding domain HCV85_020205 PF14552 Tautomerase enzyme HCV85_020215 PF05221 S-adenosyl-L-homocysteine hydrolase HCV85_020215 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HCV85_020220 PF02277 Phosphoribosyltransferase HCV85_020225 PF02654 Cobalamin-5-phosphate synthase HCV85_020230 PF04363 Protein of unknown function (DUF496) HCV85_020235 PF04632 Fusaric acid resistance protein family HCV85_020240 PF06445 GyrI-like small molecule binding domain HCV85_020245 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HCV85_020315 PF03869 Arc-like DNA binding domain HCV85_020420 PF03245 Bacteriophage Rz lysis protein HCV85_020425 PF00959 Phage lysozyme HCV85_020495 PF00772 DnaB-like helicase N terminal domain HCV85_020495 PF03796 DnaB-like helicase C terminal domain HCV85_020590 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HCV85_020590 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HCV85_020600 PF01406 tRNA synthetases class I (C) catalytic domain HCV85_020600 PF09190 DALR domain HCV85_020605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HCV85_020610 PF00149 Calcineurin-like phosphoesterase HCV85_020620 PF00731 AIR carboxylase HCV85_020625 PF02222 ATP-grasp domain HCV85_020625 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HCV85_020635 PF00267 Gram-negative porin HCV85_020650 PF00005 ABC transporter HCV85_020655 PF13472 GDSL-like Lipase/Acylhydrolase family HCV85_020660 PF00106 short chain dehydrogenase HCV85_020665 PF00085 Thioredoxin HCV85_020670 PF03649 Uncharacterised protein family (UPF0014) HCV85_020675 PF00005 ABC transporter HCV85_020680 PF16200 C-terminal region of band_7 HCV85_020680 PF01145 SPFH domain / Band 7 family HCV85_020685 PF01957 NfeD-like C-terminal, partner-binding HCV85_020690 PF13411 MerR HTH family regulatory protein HCV85_020695 PF00403 Heavy-metal-associated domain HCV85_020700 PF01963 TraB family HCV85_020705 PF04073 Aminoacyl-tRNA editing domain HCV85_020710 PF00149 Calcineurin-like phosphoesterase HCV85_020710 PF02872 5'-nucleotidase, C-terminal domain HCV85_020715 PF07690 Major Facilitator Superfamily HCV85_020720 PF00999 Sodium/hydrogen exchanger family HCV85_020720 PF02254 TrkA-N domain HCV85_020725 PF00294 pfkB family carbohydrate kinase HCV85_020730 PF00762 Ferrochelatase HCV85_020735 PF05191 Adenylate kinase, active site lid HCV85_020740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_020740 PF00183 Hsp90 protein HCV85_020745 PF13662 Toprim domain HCV85_020745 PF02132 RecR protein HCV85_020750 PF02575 YbaB/EbfC DNA-binding family HCV85_020755 PF12170 DNA polymerase III tau subunit V interacting with alpha HCV85_020755 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HCV85_020755 PF12169 DNA polymerase III subunits gamma and tau domain III HCV85_020760 PF00156 Phosphoribosyl transferase domain HCV85_020765 PF04304 Protein of unknown function (DUF454) HCV85_020770 PF07445 Primosomal replication protein priC HCV85_020775 PF10689 Protein of unknown function (DUF2496) HCV85_020780 PF04754 Putative transposase, YhgA-like HCV85_020785 PF00924 Mechanosensitive ion channel HCV85_020785 PF12794 Mechanosensitive ion channel inner membrane domain 1 HCV85_020785 PF12795 Mechanosensitive ion channel porin domain HCV85_020790 PF08361 MAATS-type transcriptional repressor, C-terminal region HCV85_020790 PF00440 Bacterial regulatory proteins, tetR family HCV85_020795 PF00529 HlyD membrane-fusion protein of T1SS HCV85_020795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_020800 PF00873 AcrB/AcrD/AcrF family HCV85_020805 PF10757 Biofilm formation regulator YbaJ HCV85_020810 PF05321 Haemolysin expression modulating protein HCV85_020815 PF14602 Hexapeptide repeat of succinyl-transferase HCV85_020815 PF12464 Maltose acetyltransferase HCV85_020825 PF10777 Inner membrane protein YlaC HCV85_020830 PF00392 Bacterial regulatory proteins, gntR family HCV85_020830 PF00155 Aminotransferase class I and II HCV85_020840 PF00444 Ribosomal protein L36 HCV85_020845 PF01197 Ribosomal protein L31 HCV85_020850 PF00356 Bacterial regulatory proteins, lacI family HCV85_020855 PF02264 LamB porin HCV85_020860 PF00367 phosphotransferase system, EIIB HCV85_020860 PF02378 Phosphotransferase system, EIIC HCV85_020865 PF02449 Beta-galactosidase HCV85_020865 PF08532 Beta-galactosidase trimerisation domain HCV85_020865 PF08533 Beta-galactosidase C-terminal domain HCV85_020870 PF07745 Glycosyl hydrolase family 53 HCV85_020875 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_020880 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_020885 PF13416 Bacterial extracellular solute-binding protein HCV85_020890 PF17912 MalK OB fold domain HCV85_020890 PF00005 ABC transporter HCV85_020895 PF00563 EAL domain HCV85_020895 PF12792 CSS motif domain associated with EAL HCV85_020900 PF02583 Metal-sensitive transcriptional repressor HCV85_020905 PF03824 High-affinity nickel-transport protein HCV85_020940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCV85_020945 PF09619 Type III secretion system lipoprotein chaperone (YscW) HCV85_020955 PF00909 Ammonium Transporter Family HCV85_020960 PF00543 Nitrogen regulatory protein P-II HCV85_020965 PF00664 ABC transporter transmembrane region HCV85_020965 PF00005 ABC transporter HCV85_020970 PF00664 ABC transporter transmembrane region HCV85_020970 PF00005 ABC transporter HCV85_020975 PF01037 Lrp/AsnC ligand binding domain HCV85_020975 PF13404 AsnC-type helix-turn-helix domain HCV85_020980 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_020990 PF12793 Sugar transport-related sRNA regulator N-term HCV85_020990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_020995 PF06508 Queuosine biosynthesis protein QueC HCV85_021010 PF13145 PPIC-type PPIASE domain HCV85_021015 PF00216 Bacterial DNA-binding protein HCV85_021020 PF02190 ATP-dependent protease La (LON) substrate-binding domain HCV85_021020 PF05362 Lon protease (S16) C-terminal proteolytic domain HCV85_021020 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_021025 PF06689 ClpX C4-type zinc finger HCV85_021025 PF07724 AAA domain (Cdc48 subfamily) HCV85_021025 PF10431 C-terminal, D2-small domain, of ClpB protein HCV85_021030 PF00574 Clp protease HCV85_021035 PF05697 Bacterial trigger factor protein (TF) HCV85_021035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV85_021035 PF05698 Bacterial trigger factor protein (TF) C-terminus HCV85_021040 PF01722 BolA-like protein HCV85_021045 PF03923 Uncharacterized lipoprotein HCV85_021045 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HCV85_021050 PF07690 Major Facilitator Superfamily HCV85_021055 PF06481 COX Aromatic Rich Motif HCV85_021055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HCV85_021060 PF00115 Cytochrome C and Quinol oxidase polypeptide I HCV85_021065 PF00510 Cytochrome c oxidase subunit III HCV85_021070 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HCV85_021075 PF01040 UbiA prenyltransferase family HCV85_021085 PF01614 Bacterial transcriptional regulator HCV85_021085 PF09339 IclR helix-turn-helix domain HCV85_021090 PF08501 Shikimate dehydrogenase substrate binding domain HCV85_021090 PF01488 Shikimate / quinate 5-dehydrogenase HCV85_021090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV85_021095 PF00890 FAD binding domain HCV85_021105 PF00890 FAD binding domain HCV85_021115 PF07690 Major Facilitator Superfamily HCV85_021120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_021120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_021125 PF07690 Major Facilitator Superfamily HCV85_021130 PF04461 Protein of unknown function (DUF520) HCV85_021135 PF02558 Ketopantoate reductase PanE/ApbA HCV85_021135 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCV85_021140 PF01965 DJ-1/PfpI family HCV85_021150 PF02926 THUMP domain HCV85_021150 PF02568 Thiamine biosynthesis protein (ThiI) HCV85_021155 PF02609 Exonuclease VII small subunit HCV85_021160 PF00348 Polyprenyl synthetase HCV85_021165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HCV85_021165 PF02779 Transketolase, pyrimidine binding domain HCV85_021165 PF02780 Transketolase, C-terminal domain HCV85_021170 PF00248 Aldo/keto reductase family HCV85_021175 PF04608 Phosphatidylglycerophosphatase A HCV85_021180 PF00586 AIR synthase related protein, N-terminal domain HCV85_021180 PF02769 AIR synthase related protein, C-terminal domain HCV85_021185 PF01029 NusB family HCV85_021190 PF00885 6,7-dimethyl-8-ribityllumazine synthase HCV85_021195 PF01872 RibD C-terminal domain HCV85_021195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCV85_021200 PF03477 ATP cone domain HCV85_021205 PF11622 Protein of unknown function (DUF3251) HCV85_021210 PF03502 Nucleoside-specific channel-forming protein, Tsx HCV85_021225 PF07549 SecD/SecF GG Motif HCV85_021225 PF02355 Protein export membrane protein HCV85_021230 PF07549 SecD/SecF GG Motif HCV85_021230 PF13721 SecD export protein N-terminal TM region HCV85_021230 PF02355 Protein export membrane protein HCV85_021235 PF02699 Preprotein translocase subunit HCV85_021240 PF01702 Queuine tRNA-ribosyltransferase HCV85_021245 PF02547 Queuosine biosynthesis protein HCV85_021255 PF04336 Acyl carrier protein phosphodiesterase HCV85_021260 PF00578 AhpC/TSA family HCV85_021260 PF10417 C-terminal domain of 1-Cys peroxiredoxin HCV85_021270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_021280 PF03611 PTS system sugar-specific permease component HCV85_021285 PF00294 pfkB family carbohydrate kinase HCV85_021290 PF01116 Fructose-bisphosphate aldolase class-II HCV85_021295 PF01979 Amidohydrolase family HCV85_021305 PF00857 Isochorismatase family HCV85_021310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_021310 PF03466 LysR substrate binding domain HCV85_021315 PF00128 Alpha amylase, catalytic domain HCV85_021315 PF02903 Alpha amylase, N-terminal ig-like domain HCV85_021320 PF00324 Amino acid permease HCV85_021325 PF05525 Branched-chain amino acid transport protein HCV85_021330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_021330 PF11808 Phosphate regulon sensor protein PhoR HCV85_021330 PF00512 His Kinase A (phospho-acceptor) domain HCV85_021330 PF00989 PAS fold HCV85_021335 PF00072 Response regulator receiver domain HCV85_021335 PF00486 Transcriptional regulatory protein, C terminal HCV85_021340 PF12320 Type 5 capsule protein repressor C-terminal domain HCV85_021340 PF00149 Calcineurin-like phosphoesterase HCV85_021345 PF13476 AAA domain HCV85_021350 PF00480 ROK family HCV85_021355 PF04381 Putative exonuclease, RdgC HCV85_021360 PF06865 Pyrimidine/purine nucleoside phosphorylase HCV85_021365 PF07302 AroM protein HCV85_021370 PF16362 YaiA protein HCV85_021375 PF01202 Shikimate kinase HCV85_021380 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) HCV85_021385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HCV85_021390 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCV85_021390 PF03807 NADP oxidoreductase coenzyme F420-dependent HCV85_021395 PF07769 psiF repeat HCV85_021400 PF00245 Alkaline phosphatase HCV85_021405 PF10796 Sigma-S stabilisation anti-adaptor protein HCV85_021410 PF07690 Major Facilitator Superfamily HCV85_021420 PF07478 D-ala D-ala ligase C-terminus HCV85_021420 PF01820 D-ala D-ala ligase N-terminus HCV85_021425 PF10953 Protein of unknown function (DUF2754) HCV85_021430 PF10954 Protein of unknown function (DUF2755) HCV85_021435 PF07759 Protein of unknown function (DUF1615) HCV85_021440 PF05992 SbmA/BacA-like family HCV85_021445 PF00857 Isochorismatase family HCV85_021450 PF00144 Beta-lactamase HCV85_021455 PF00490 Delta-aminolevulinic acid dehydratase HCV85_021465 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HCV85_021470 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_021475 PF00005 ABC transporter HCV85_021480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCV85_021485 PF02574 Homocysteine S-methyltransferase HCV85_021490 PF00324 Amino acid permease HCV85_021500 PF00324 Amino acid permease HCV85_021505 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HCV85_021510 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HCV85_021520 PF13458 Periplasmic binding protein HCV85_021525 PF02653 Branched-chain amino acid transport system / permease component HCV85_021530 PF02653 Branched-chain amino acid transport system / permease component HCV85_021530 PF11862 Domain of unknown function (DUF3382) HCV85_021535 PF00005 ABC transporter HCV85_021535 PF12399 Branched-chain amino acid ATP-binding cassette transporter HCV85_021540 PF00005 ABC transporter HCV85_021550 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_021555 PF00005 ABC transporter HCV85_021560 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_021565 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_021580 PF16967 E-set like domain HCV85_021580 PF15976 CS1-pili formation C-terminal HCV85_021585 PF18649 EcpB C-terminal domain HCV85_021590 PF16449 Fimbrillin MatB HCV85_021595 PF00196 Bacterial regulatory proteins, luxR family HCV85_021600 PF00005 ABC transporter HCV85_021610 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_021615 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_021635 PF00877 NlpC/P60 family HCV85_021640 PF00267 Gram-negative porin HCV85_021645 PF00696 Amino acid kinase family HCV85_021645 PF01472 PUA domain HCV85_021650 PF00171 Aldehyde dehydrogenase family HCV85_021660 PF14659 Phage integrase, N-terminal SAM-like domain HCV85_021660 PF00589 Phage integrase family HCV85_021660 PF13356 Arm DNA-binding domain HCV85_021665 PF13614 AAA domain HCV85_021680 PF04606 Ogr/Delta-like zinc finger HCV85_021705 PF17345 Family of unknown function (DUF5375) HCV85_021720 PF00069 Protein kinase domain HCV85_021720 PF13191 AAA ATPase domain HCV85_021725 PF00676 Dehydrogenase E1 component HCV85_021730 PF02779 Transketolase, pyrimidine binding domain HCV85_021730 PF02780 Transketolase, C-terminal domain HCV85_021735 PF00364 Biotin-requiring enzyme HCV85_021735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCV85_021735 PF02817 e3 binding domain HCV85_021740 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_021740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV85_021750 PF01791 DeoC/LacD family aldolase HCV85_021760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_021760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_021770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_021770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV85_021770 PF01842 ACT domain HCV85_021775 PF03611 PTS system sugar-specific permease component HCV85_021780 PF13417 Glutathione S-transferase, N-terminal domain HCV85_021780 PF00043 Glutathione S-transferase, C-terminal domain HCV85_021785 PF13847 Methyltransferase domain HCV85_021790 PF09857 Putative toxin of bacterial toxin-antitoxin pair HCV85_021795 PF08943 CsiD HCV85_021800 PF01266 FAD dependent oxidoreductase HCV85_021805 PF00171 Aldehyde dehydrogenase family HCV85_021810 PF00202 Aminotransferase class-III HCV85_021815 PF00324 Amino acid permease HCV85_021820 PF00392 Bacterial regulatory proteins, gntR family HCV85_021820 PF07729 FCD domain HCV85_021825 PF07417 Sigma factor-binding transcriptional regulator Crl HCV85_021830 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) HCV85_021835 PF00156 Phosphoribosyl transferase domain HCV85_021840 PF07687 Peptidase dimerisation domain HCV85_021840 PF01546 Peptidase family M20/M25/M40 HCV85_021845 PF13673 Acetyltransferase (GNAT) domain HCV85_021850 PF11798 IMS family HHH motif HCV85_021850 PF11799 impB/mucB/samB family C-terminal domain HCV85_021850 PF00817 impB/mucB/samB family HCV85_021855 PF03009 Glycerophosphoryl diester phosphodiesterase family HCV85_021860 PF04400 (Na+)-NQR maturation NqrM HCV85_021865 PF00970 Oxidoreductase FAD-binding domain HCV85_021865 PF00175 Oxidoreductase NAD-binding domain HCV85_021865 PF00111 2Fe-2S iron-sulfur cluster binding domain HCV85_021870 PF02508 Rnf-Nqr subunit, membrane protein HCV85_021875 PF02508 Rnf-Nqr subunit, membrane protein HCV85_021880 PF04205 FMN-binding domain HCV85_021885 PF03116 NQR2, RnfD, RnfE family HCV85_021890 PF11973 NQRA C-terminal domain HCV85_021890 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HCV85_021895 PF03734 L,D-transpeptidase catalytic domain HCV85_021900 PF13230 Glutamine amidotransferases class-II HCV85_021905 PF13580 SIS domain HCV85_021910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCV85_021910 PF02770 Acyl-CoA dehydrogenase, middle domain HCV85_021910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCV85_021910 PF09317 Domain of unknown function (DUF1974) HCV85_021915 PF00795 Carbon-nitrogen hydrolase HCV85_021920 PF01810 LysE type translocator HCV85_021925 PF03466 LysR substrate binding domain HCV85_021925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_021935 PF00929 Exonuclease HCV85_021940 PF00075 RNase H HCV85_021945 PF08241 Methyltransferase domain HCV85_021950 PF00753 Metallo-beta-lactamase superfamily HCV85_021950 PF16123 Hydroxyacylglutathione hydrolase C-terminus HCV85_021955 PF01464 Transglycosylase SLT domain HCV85_021955 PF01476 LysM domain HCV85_021960 PF08241 Methyltransferase domain HCV85_021965 PF03372 Endonuclease/Exonuclease/phosphatase family HCV85_021970 PF07690 Major Facilitator Superfamily HCV85_021975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_021975 PF03466 LysR substrate binding domain HCV85_021980 PF00248 Aldo/keto reductase family HCV85_022020 PF09383 NIL domain HCV85_022020 PF00005 ABC transporter HCV85_022025 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_022030 PF03180 NLPA lipoprotein HCV85_022035 PF16358 RcsF lipoprotein HCV85_022040 PF01980 tRNA-methyltransferase O HCV85_022040 PF18389 TrmO C-terminal domain HCV85_022045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCV85_022045 PF03129 Anticodon binding domain HCV85_022045 PF04073 Aminoacyl-tRNA editing domain HCV85_022050 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HCV85_022055 PF17185 NlpE C-terminal OB domain HCV85_022055 PF04170 NlpE N-terminal domain HCV85_022060 PF00472 RF-1 domain HCV85_022065 PF07152 YaeQ protein HCV85_022070 PF06786 Uncharacterised protein family (UPF0253) HCV85_022075 PF07073 Modulator of Rho-dependent transcription termination (ROF) HCV85_022080 PF09179 TilS substrate binding domain HCV85_022080 PF11734 TilS substrate C-terminal domain HCV85_022080 PF01171 PP-loop family HCV85_022085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV85_022090 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCV85_022090 PF01276 Orn/Lys/Arg decarboxylase, major domain HCV85_022090 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HCV85_022095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HCV85_022100 PF01336 OB-fold nucleic acid binding domain HCV85_022100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCV85_022100 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCV85_022100 PF02811 PHP domain HCV85_022100 PF14579 Helix-hairpin-helix motif HCV85_022105 PF01351 Ribonuclease HII HCV85_022110 PF02684 Lipid-A-disaccharide synthetase HCV85_022115 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_022115 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HCV85_022120 PF07977 FabA-like domain HCV85_022125 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HCV85_022125 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_022130 PF03938 Outer membrane protein (OmpH-like) HCV85_022135 PF07244 Surface antigen variable number repeat HCV85_022135 PF01103 Surface antigen HCV85_022140 PF02163 Peptidase family M50 HCV85_022140 PF17820 PDZ domain HCV85_022150 PF01255 Putative undecaprenyl diphosphate synthase HCV85_022155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HCV85_022155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HCV85_022155 PF13288 DXP reductoisomerase C-terminal domain HCV85_022160 PF01765 Ribosome recycling factor HCV85_022165 PF00696 Amino acid kinase family HCV85_022170 PF00889 Elongation factor TS HCV85_022175 PF00318 Ribosomal protein S2 HCV85_022180 PF00557 Metallopeptidase family M24 HCV85_022185 PF01842 ACT domain HCV85_022185 PF01909 Nucleotidyltransferase domain HCV85_022185 PF01966 HD domain HCV85_022185 PF08335 GlnD PII-uridylyltransferase HCV85_022190 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_022190 PF14602 Hexapeptide repeat of succinyl-transferase HCV85_022190 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HCV85_022195 PF11944 Protein of unknown function (DUF3461) HCV85_022200 PF05651 Putative sugar diacid recognition HCV85_022200 PF13556 PucR C-terminal helix-turn-helix domain HCV85_022200 PF17853 GGDEF-like domain HCV85_022205 PF00595 PDZ domain HCV85_022210 PF01966 HD domain HCV85_022210 PF13286 Phosphohydrolase-associated domain HCV85_022215 PF01048 Phosphorylase superfamily HCV85_022220 PF01497 Periplasmic binding protein HCV85_022225 PF03458 UPF0126 domain HCV85_022230 PF01521 Iron-sulphur cluster biosynthesis HCV85_022235 PF00654 Voltage gated chloride channel HCV85_022240 PF00202 Aminotransferase class-III HCV85_022245 PF01032 FecCD transport family HCV85_022250 PF01497 Periplasmic binding protein HCV85_022255 PF00005 ABC transporter HCV85_022260 PF00593 TonB dependent receptor HCV85_022260 PF07715 TonB-dependent Receptor Plug Domain HCV85_022265 PF00905 Penicillin binding protein transpeptidase domain HCV85_022265 PF14814 Bifunctional transglycosylase second domain HCV85_022265 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal HCV85_022265 PF00912 Transglycosylase HCV85_022275 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HCV85_022280 PF16537 Type II secretion system protein B HCV85_022285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV85_022285 PF11852 Domain of unknown function (DUF3372) HCV85_022285 PF17967 Pullulanase N2 domain HCV85_022285 PF18494 Pullulanase Ins domain HCV85_022285 PF03714 Bacterial pullanase-associated domain HCV85_022295 PF11356 Type II secretion system protein C HCV85_022300 PF03958 Bacterial type II/III secretion system short domain HCV85_022300 PF00263 Bacterial type II and III secretion system protein HCV85_022305 PF00437 Type II/IV secretion system protein HCV85_022310 PF00482 Type II secretion system (T2SS), protein F HCV85_022315 PF08334 Type II secretion system (T2SS), protein G HCV85_022315 PF07963 Prokaryotic N-terminal methylation motif HCV85_022320 PF07963 Prokaryotic N-terminal methylation motif HCV85_022325 PF07963 Prokaryotic N-terminal methylation motif HCV85_022325 PF02501 Type II secretion system (T2SS), protein I HCV85_022330 PF07963 Prokaryotic N-terminal methylation motif HCV85_022330 PF11612 Type II secretion system (T2SS), protein J HCV85_022335 PF03934 Type II secretion system (T2SS), protein K HCV85_022340 PF05134 Type II secretion system (T2SS), protein L HCV85_022340 PF12693 GspL periplasmic domain HCV85_022345 PF04612 Type II secretion system (T2SS), protein M HCV85_022350 PF01203 Type II secretion system (T2SS), protein N HCV85_022355 PF06750 Bacterial Peptidase A24 N-terminal domain HCV85_022355 PF01478 Type IV leader peptidase family HCV85_022360 PF04408 Helicase associated domain (HA2) HCV85_022360 PF00270 DEAD/DEAH box helicase HCV85_022360 PF00271 Helicase conserved C-terminal domain HCV85_022360 PF08482 ATP-dependent helicase C-terminal HCV85_022365 PF02834 LigT like Phosphoesterase HCV85_022370 PF17746 SfsA N-terminal OB domain HCV85_022370 PF03749 Sugar fermentation stimulation protein RE domain HCV85_022375 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCV85_022380 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCV85_022385 PF12627 Probable RNA and SrmB- binding site of polymerase A HCV85_022385 PF01743 Poly A polymerase head domain HCV85_022385 PF12626 Polymerase A arginine-rich C-terminus HCV85_022390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HCV85_022395 PF02548 Ketopantoate hydroxymethyltransferase HCV85_022400 PF02569 Pantoate-beta-alanine ligase HCV85_022405 PF02261 Aspartate decarboxylase HCV85_022410 PF01522 Polysaccharide deacetylase HCV85_022415 PF03610 PTS system fructose IIA component HCV85_022420 PF01061 ABC-2 type transporter HCV85_022425 PF00005 ABC transporter HCV85_022430 PF00484 Carbonic anhydrase HCV85_022435 PF00156 Phosphoribosyl transferase domain HCV85_022445 PF01011 PQQ enzyme repeat HCV85_022450 PF00394 Multicopper oxidase HCV85_022450 PF07731 Multicopper oxidase HCV85_022450 PF07732 Multicopper oxidase HCV85_022455 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HCV85_022480 PF17284 Spermidine synthase tetramerisation domain HCV85_022485 PF02675 S-adenosylmethionine decarboxylase HCV85_022490 PF06062 Uncharacterised protein family (UPF0231) HCV85_022495 PF11791 Aconitate B N-terminal domain HCV85_022495 PF06434 Aconitate hydratase 2 N-terminus HCV85_022495 PF00330 Aconitase family (aconitate hydratase) HCV85_022500 PF11737 Protein of unknown function (DUF3300) HCV85_022515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV85_022515 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_022520 PF02817 e3 binding domain HCV85_022520 PF00364 Biotin-requiring enzyme HCV85_022520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCV85_022525 PF00456 Transketolase, thiamine diphosphate binding domain HCV85_022525 PF17831 Pyruvate dehydrogenase E1 component middle domain HCV85_022530 PF00392 Bacterial regulatory proteins, gntR family HCV85_022530 PF07729 FCD domain HCV85_022535 PF00324 Amino acid permease HCV85_022545 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain HCV85_022545 PF04616 Glycosyl hydrolases family 43 HCV85_022550 PF17113 Regulatory signalling modulator protein AmpE HCV85_022555 PF01510 N-acetylmuramoyl-L-alanine amidase HCV85_022560 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HCV85_022560 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HCV85_022565 PF07963 Prokaryotic N-terminal methylation motif HCV85_022570 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HCV85_022570 PF00437 Type II/IV secretion system protein HCV85_022575 PF00482 Type II secretion system (T2SS), protein F HCV85_022580 PF00478 IMP dehydrogenase / GMP reductase domain HCV85_022585 PF01121 Dephospho-CoA kinase HCV85_022590 PF07072 Cell division protein HCV85_022595 PF03884 DNA gyrase inhibitor YacG HCV85_022600 PF00293 NUDIX domain HCV85_022605 PF07517 SecA DEAD-like domain HCV85_022605 PF01043 SecA preprotein cross-linking domain HCV85_022605 PF02810 SEC-C motif HCV85_022605 PF07516 SecA Wing and Scaffold domain HCV85_022610 PF06558 Secretion monitor precursor protein (SecM) HCV85_022615 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HCV85_022620 PF12327 FtsZ family, C-terminal domain HCV85_022620 PF00091 Tubulin/FtsZ family, GTPase domain HCV85_022625 PF02491 SHS2 domain inserted in FTSA HCV85_022630 PF03799 Cell division protein FtsQ HCV85_022630 PF08478 POTRA domain, FtsQ-type HCV85_022635 PF01820 D-ala D-ala ligase N-terminus HCV85_022635 PF07478 D-ala D-ala ligase C-terminus HCV85_022640 PF08245 Mur ligase middle domain HCV85_022640 PF01225 Mur ligase family, catalytic domain HCV85_022640 PF02875 Mur ligase family, glutamate ligase domain HCV85_022645 PF03033 Glycosyltransferase family 28 N-terminal domain HCV85_022645 PF04101 Glycosyltransferase family 28 C-terminal domain HCV85_022650 PF01098 Cell cycle protein HCV85_022655 PF02875 Mur ligase family, glutamate ligase domain HCV85_022655 PF08245 Mur ligase middle domain HCV85_022660 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HCV85_022660 PF00953 Glycosyl transferase family 4 HCV85_022665 PF01225 Mur ligase family, catalytic domain HCV85_022665 PF02875 Mur ligase family, glutamate ligase domain HCV85_022665 PF08245 Mur ligase middle domain HCV85_022670 PF08245 Mur ligase middle domain HCV85_022670 PF02875 Mur ligase family, glutamate ligase domain HCV85_022670 PF01225 Mur ligase family, catalytic domain HCV85_022675 PF03717 Penicillin-binding Protein dimerisation domain HCV85_022675 PF00905 Penicillin binding protein transpeptidase domain HCV85_022680 PF04999 Cell division protein FtsL HCV85_022685 PF01795 MraW methylase family HCV85_022690 PF02381 MraZ protein, putative antitoxin-like HCV85_022695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV85_022695 PF00356 Bacterial regulatory proteins, lacI family HCV85_022700 PF10369 Small subunit of acetolactate synthase HCV85_022705 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_022705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_022705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_022710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_022710 PF03466 LysR substrate binding domain HCV85_022720 PF00682 HMGL-like HCV85_022720 PF08502 LeuA allosteric (dimerisation) domain HCV85_022725 PF00180 Isocitrate/isopropylmalate dehydrogenase HCV85_022730 PF00330 Aconitase family (aconitate hydratase) HCV85_022735 PF00694 Aconitase C-terminal domain HCV85_022740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCV85_022740 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_022745 PF08501 Shikimate dehydrogenase substrate binding domain HCV85_022745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCV85_022750 PF07690 Major Facilitator Superfamily HCV85_022755 PF01487 Type I 3-dehydroquinase HCV85_022760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_022760 PF03466 LysR substrate binding domain HCV85_022765 PF07690 Major Facilitator Superfamily HCV85_022770 PF07690 Major Facilitator Superfamily HCV85_022780 PF12793 Sugar transport-related sRNA regulator N-term HCV85_022780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCV85_022790 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_022795 PF00005 ABC transporter HCV85_022800 PF09335 SNARE associated Golgi protein HCV85_022805 PF12833 Helix-turn-helix domain HCV85_022805 PF02311 AraC-like ligand binding domain HCV85_022810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_022815 PF11762 L-arabinose isomerase C-terminal domain HCV85_022815 PF02610 L-arabinose isomerase HCV85_022820 PF00596 Class II Aldolase and Adducin N-terminal domain HCV85_022825 PF00136 DNA polymerase family B HCV85_022825 PF03104 DNA polymerase family B, exonuclease domain HCV85_022830 PF00271 Helicase conserved C-terminal domain HCV85_022830 PF12137 RNA polymerase recycling family C-terminal HCV85_022830 PF00176 SNF2 family N-terminal domain HCV85_022830 PF18339 RapA N-terminal Tudor like domain 1 HCV85_022830 PF18337 RapA N-terminal Tudor like domain HCV85_022835 PF00849 RNA pseudouridylate synthase HCV85_022840 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HCV85_022845 PF03390 2-hydroxycarboxylate transporter family HCV85_022850 PF17203 Single cache domain 3 HCV85_022850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_022855 PF00072 Response regulator receiver domain HCV85_022855 PF12431 Transcriptional regulator HCV85_022860 PF05099 Tellurite resistance protein TerB HCV85_022860 PF00226 DnaJ domain HCV85_022865 PF03968 OstA-like protein HCV85_022865 PF04453 LPS transport system D HCV85_022870 PF00639 PPIC-type PPIASE domain HCV85_022870 PF09312 SurA N-terminal domain HCV85_022875 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HCV85_022880 PF00398 Ribosomal RNA adenine dimethylase HCV85_022885 PF04379 ApaG domain HCV85_022890 PF00149 Calcineurin-like phosphoesterase HCV85_022895 PF00186 Dihydrofolate reductase HCV85_022900 PF00999 Sodium/hydrogen exchanger family HCV85_022900 PF02254 TrkA-N domain HCV85_022905 PF02525 Flavodoxin-like fold HCV85_022910 PF06004 Bacterial protein of unknown function (DUF903) HCV85_022915 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HCV85_022915 PF02142 MGS-like domain HCV85_022915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCV85_022920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HCV85_022920 PF00117 Glutamine amidotransferase class-I HCV85_022925 PF01113 Dihydrodipicolinate reductase, N-terminus HCV85_022925 PF05173 Dihydrodipicolinate reductase, C-terminus HCV85_022930 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HCV85_022935 PF04223 Citrate lyase, alpha subunit (CitF) HCV85_022940 PF03328 HpcH/HpaI aldolase/citrate lyase family HCV85_022945 PF06857 Malonate decarboxylase delta subunit (MdcD) HCV85_022950 PF00583 Acetyltransferase (GNAT) family HCV85_022950 PF08218 Citrate lyase ligase C-terminal domain HCV85_022955 PF03390 2-hydroxycarboxylate transporter family HCV85_022960 PF04277 Oxaloacetate decarboxylase, gamma chain HCV85_022965 PF00682 HMGL-like HCV85_022965 PF02436 Conserved carboxylase domain HCV85_022965 PF00364 Biotin-requiring enzyme HCV85_022970 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HCV85_022975 PF17203 Single cache domain 3 HCV85_022975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_022980 PF00072 Response regulator receiver domain HCV85_022980 PF12431 Transcriptional regulator HCV85_022985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCV85_022985 PF01411 tRNA synthetases class II (A) HCV85_022985 PF02272 DHHA1 domain HCV85_022990 PF03466 LysR substrate binding domain HCV85_022990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_023000 PF01156 Inosine-uridine preferring nucleoside hydrolase HCV85_023005 PF02401 LytB protein HCV85_023010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV85_023015 PF01252 Signal peptidase (SPase) II HCV85_023020 PF08264 Anticodon-binding domain of tRNA HCV85_023020 PF00133 tRNA synthetases class I (I, L, M and V) HCV85_023020 PF06827 Zinc finger found in FPG and IleRS HCV85_023025 PF01687 Riboflavin kinase HCV85_023025 PF06574 FAD synthetase HCV85_023030 PF01649 Ribosomal protein S20 HCV85_023035 PF03466 LysR substrate binding domain HCV85_023035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_023040 PF06965 Na+/H+ antiporter 1 HCV85_023045 PF00226 DnaJ domain HCV85_023045 PF01556 DnaJ C terminal domain HCV85_023045 PF00684 DnaJ central domain HCV85_023050 PF00012 Hsp70 protein HCV85_023055 PF10807 Protein of unknown function (DUF2541) HCV85_023060 PF13099 Domain of unknown function (DUF3944) HCV85_023060 PF03981 Ubiquinol-cytochrome C chaperone HCV85_023065 PF01184 GPR1/FUN34/yaaH family HCV85_023070 PF07690 Major Facilitator Superfamily HCV85_023075 PF00994 Probable molybdopterin binding domain HCV85_023080 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCV85_023085 PF01235 Sodium:alanine symporter family HCV85_023090 PF03883 Peroxide stress protein YaaA HCV85_023100 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_023100 PF14821 Threonine synthase N terminus HCV85_023105 PF08544 GHMP kinases C terminal HCV85_023105 PF00288 GHMP kinases N terminal domain HCV85_023110 PF01842 ACT domain HCV85_023110 PF13840 ACT domain HCV85_023110 PF00742 Homoserine dehydrogenase HCV85_023110 PF03447 Homoserine dehydrogenase, NAD binding domain HCV85_023110 PF00696 Amino acid kinase family HCV85_023115 PF08254 Threonine leader peptide HCV85_023120 PF00588 SpoU rRNA Methylase family HCV85_023130 PF00486 Transcriptional regulatory protein, C terminal HCV85_023130 PF00072 Response regulator receiver domain HCV85_023135 PF06123 Inner membrane protein CreD HCV85_023140 PF00512 His Kinase A (phospho-acceptor) domain HCV85_023140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_023140 PF00672 HAMP domain HCV85_023145 PF00486 Transcriptional regulatory protein, C terminal HCV85_023145 PF00072 Response regulator receiver domain HCV85_023150 PF05981 CreA protein HCV85_023155 PF12833 Helix-turn-helix domain HCV85_023155 PF06445 GyrI-like small molecule binding domain HCV85_023160 PF00300 Histidine phosphatase superfamily (branch 1) HCV85_023165 PF01931 Protein of unknown function DUF84 HCV85_023170 PF01371 Trp repressor protein HCV85_023175 PF01464 Transglycosylase SLT domain HCV85_023175 PF14718 Soluble lytic murein transglycosylase L domain HCV85_023180 PF12848 ABC transporter HCV85_023180 PF00005 ABC transporter HCV85_023185 PF13521 AAA domain HCV85_023185 PF01381 Helix-turn-helix HCV85_023190 PF18073 Rubredoxin metal binding domain HCV85_023195 PF18429 Domain of unknown function (DUF5609) HCV85_023200 PF10144 Bacterial virulence factor haemolysin HCV85_023205 PF03099 Biotin/lipoate A/B protein ligase family HCV85_023205 PF10437 Bacterial lipoate protein ligase C-terminus HCV85_023210 PF01048 Phosphorylase superfamily HCV85_023215 PF01676 Metalloenzyme superfamily HCV85_023220 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HCV85_023220 PF02885 Glycosyl transferase family, helical bundle domain HCV85_023220 PF00591 Glycosyl transferase family, a/b domain HCV85_023225 PF01791 DeoC/LacD family aldolase HCV85_023230 PF07662 Na+ dependent nucleoside transporter C-terminus HCV85_023230 PF01773 Na+ dependent nucleoside transporter N-terminus HCV85_023230 PF07670 Nucleoside recognition HCV85_023235 PF01026 TatD related DNase HCV85_023240 PF01734 Patatin-like phospholipase HCV85_023245 PF07043 Protein of unknown function (DUF1328) HCV85_023250 PF04972 BON domain HCV85_023255 PF16658 Class II release factor RF3, C-terminal domain HCV85_023255 PF03144 Elongation factor Tu domain 2 HCV85_023255 PF00009 Elongation factor Tu GTP binding domain HCV85_023260 PF13419 Haloacid dehalogenase-like hydrolase HCV85_023265 PF00583 Acetyltransferase (GNAT) family HCV85_023270 PF03603 DNA polymerase III psi subunit HCV85_023275 PF08468 Methyltransferase small domain N-terminal HCV85_023275 PF05175 Methyltransferase small domain HCV85_023295 PF07256 Protein of unknown function (DUF1435) HCV85_023305 PF00990 Diguanylate cyclase, GGDEF domain HCV85_023310 PF11575 FhuF 2Fe-2S C-terminal domain HCV85_023310 PF06276 Ferric iron reductase FhuF-like transporter HCV85_023315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_023315 PF02378 Phosphotransferase system, EIIC HCV85_023320 PF04073 Aminoacyl-tRNA editing domain HCV85_023325 PF00196 Bacterial regulatory proteins, luxR family HCV85_023330 PF00196 Bacterial regulatory proteins, luxR family HCV85_023340 PF01494 FAD binding domain HCV85_023345 PF06738 Putative threonine/serine exporter HCV85_023350 PF12821 Threonine/Serine exporter, ThrE HCV85_023355 PF17948 DnaT DNA-binding domain HCV85_023360 PF01695 IstB-like ATP binding protein HCV85_023365 PF10696 Protein of unknown function (DUF2501) HCV85_023370 PF00884 Sulfatase HCV85_023375 PF04754 Putative transposase, YhgA-like HCV85_023380 PF01380 SIS domain HCV85_023385 PF01380 SIS domain HCV85_023390 PF03613 PTS system mannose/fructose/sorbose family IID component HCV85_023395 PF03609 PTS system sorbose-specific iic component HCV85_023400 PF03830 PTS system sorbose subfamily IIB component HCV85_023405 PF03830 PTS system sorbose subfamily IIB component HCV85_023405 PF03610 PTS system fructose IIA component HCV85_023410 PF00158 Sigma-54 interaction domain HCV85_023410 PF00874 PRD domain HCV85_023410 PF03610 PTS system fructose IIA component HCV85_023415 PF08125 Mannitol dehydrogenase C-terminal domain HCV85_023415 PF01232 Mannitol dehydrogenase Rossmann domain HCV85_023420 PF00107 Zinc-binding dehydrogenase HCV85_023420 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_023425 PF00392 Bacterial regulatory proteins, gntR family HCV85_023425 PF07729 FCD domain HCV85_023430 PF07690 Major Facilitator Superfamily HCV85_023435 PF00583 Acetyltransferase (GNAT) family HCV85_023435 PF00814 Glycoprotease family HCV85_023440 PF00583 Acetyltransferase (GNAT) family HCV85_023445 PF01380 SIS domain HCV85_023445 PF01418 Helix-turn-helix domain, rpiR family HCV85_023450 PF01081 KDPG and KHG aldolase HCV85_023455 PF05035 2-keto-3-deoxy-galactonokinase HCV85_023470 PF07969 Amidohydrolase family HCV85_023485 PF02615 Malate/L-lactate dehydrogenase HCV85_023500 PF01047 MarR family HCV85_023510 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV85_023515 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV85_023520 PF00171 Aldehyde dehydrogenase family HCV85_023525 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HCV85_023530 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase HCV85_023535 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCV85_023540 PF03328 HpcH/HpaI aldolase/citrate lyase family HCV85_023545 PF07690 Major Facilitator Superfamily HCV85_023550 PF12833 Helix-turn-helix domain HCV85_023555 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HCV85_023555 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HCV85_023560 PF01613 Flavin reductase like domain HCV85_023575 PF02554 Carbon starvation protein CstA HCV85_023575 PF13722 5TM C-terminal transporter carbon starvation CstA HCV85_023580 PF04328 Selenoprotein, putative HCV85_023585 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCV85_023585 PF07683 Cobalamin synthesis protein cobW C-terminal domain HCV85_023595 PF00171 Aldehyde dehydrogenase family HCV85_023600 PF04754 Putative transposase, YhgA-like HCV85_023605 PF02311 AraC-like ligand binding domain HCV85_023605 PF12833 Helix-turn-helix domain HCV85_023615 PF04286 Protein of unknown function (DUF445) HCV85_023620 PF07690 Major Facilitator Superfamily HCV85_023630 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HCV85_023635 PF01869 BadF/BadG/BcrA/BcrD ATPase family HCV85_023640 PF11823 Protein of unknown function (DUF3343) HCV85_023650 PF00529 HlyD membrane-fusion protein of T1SS HCV85_023650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_023660 PF06568 Domain of unknown function (DUF1127) HCV85_023665 PF00392 Bacterial regulatory proteins, gntR family HCV85_023665 PF00155 Aminotransferase class I and II HCV85_023670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCV85_023675 PF03466 LysR substrate binding domain HCV85_023675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_023680 PF02525 Flavodoxin-like fold HCV85_023685 PF02653 Branched-chain amino acid transport system / permease component HCV85_023690 PF02653 Branched-chain amino acid transport system / permease component HCV85_023695 PF00005 ABC transporter HCV85_023700 PF13407 Periplasmic binding protein domain HCV85_023705 PF00579 tRNA synthetases class I (W and Y) HCV85_023710 PF13533 Biotin-lipoyl like HCV85_023715 PF00005 ABC transporter HCV85_023750 PF08007 Cupin superfamily protein HCV85_023765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_023765 PF00512 His Kinase A (phospho-acceptor) domain HCV85_023765 PF00672 HAMP domain HCV85_023770 PF00486 Transcriptional regulatory protein, C terminal HCV85_023770 PF00072 Response regulator receiver domain HCV85_023775 PF02321 Outer membrane efflux protein HCV85_023780 PF11604 Copper binding periplasmic protein CusF HCV85_023785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_023785 PF00529 HlyD membrane-fusion protein of T1SS HCV85_023790 PF00873 AcrB/AcrD/AcrF family HCV85_023800 PF08212 Lipocalin-like domain HCV85_023805 PF13411 MerR HTH family regulatory protein HCV85_023815 PF00106 short chain dehydrogenase HCV85_023850 PF08349 Protein of unknown function (DUF1722) HCV85_023855 PF02264 LamB porin HCV85_023870 PF04616 Glycosyl hydrolases family 43 HCV85_023870 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HCV85_023920 PF17345 Family of unknown function (DUF5375) HCV85_023945 PF04606 Ogr/Delta-like zinc finger HCV85_023970 PF13356 Arm DNA-binding domain HCV85_023970 PF00589 Phage integrase family HCV85_023980 PF00484 Carbonic anhydrase HCV85_023985 PF00916 Sulfate permease family HCV85_023985 PF01740 STAS domain HCV85_023990 PF00107 Zinc-binding dehydrogenase HCV85_023990 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_023995 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_024000 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_024005 PF00149 Calcineurin-like phosphoesterase HCV85_024010 PF17912 MalK OB fold domain HCV85_024010 PF00005 ABC transporter HCV85_024015 PF13416 Bacterial extracellular solute-binding protein HCV85_024020 PF01261 Xylose isomerase-like TIM barrel HCV85_024025 PF01261 Xylose isomerase-like TIM barrel HCV85_024030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCV85_024030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCV85_024035 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_024035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_024035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_024040 PF00294 pfkB family carbohydrate kinase HCV85_024045 PF01380 SIS domain HCV85_024045 PF01418 Helix-turn-helix domain, rpiR family HCV85_024045 PF02685 Glucokinase HCV85_024050 PF04962 KduI/IolB family HCV85_024055 PF00171 Aldehyde dehydrogenase family HCV85_024065 PF05872 Bacterial protein of unknown function (DUF853) HCV85_024070 PF03739 Lipopolysaccharide export system permease LptF/LptG HCV85_024075 PF03739 Lipopolysaccharide export system permease LptF/LptG HCV85_024080 PF00883 Cytosol aminopeptidase family, catalytic domain HCV85_024080 PF02789 Cytosol aminopeptidase family, N-terminal domain HCV85_024085 PF04364 DNA polymerase III chi subunit, HolC HCV85_024090 PF08264 Anticodon-binding domain of tRNA HCV85_024090 PF10458 Valyl tRNA synthetase tRNA binding arm HCV85_024090 PF00133 tRNA synthetases class I (I, L, M and V) HCV85_024095 PF00583 Acetyltransferase (GNAT) family HCV85_024100 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HCV85_024105 PF06877 Regulator of ribonuclease activity B HCV85_024110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCV85_024110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCV85_024115 PF07702 UTRA domain HCV85_024115 PF00392 Bacterial regulatory proteins, gntR family HCV85_024120 PF03606 C4-dicarboxylate anaerobic carrier HCV85_024125 PF01979 Amidohydrolase family HCV85_024130 PF00294 pfkB family carbohydrate kinase HCV85_024135 PF01380 SIS domain HCV85_024140 PF04074 YhcH/YjgK/YiaL HCV85_024150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCV85_024150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCV85_024155 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HCV85_024155 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HCV85_024160 PF01042 Endoribonuclease L-PSP HCV85_024165 PF00689 Cation transporting ATPase, C-terminus HCV85_024165 PF00690 Cation transporter/ATPase, N-terminus HCV85_024170 PF00356 Bacterial regulatory proteins, lacI family HCV85_024175 PF02378 Phosphotransferase system, EIIC HCV85_024175 PF00367 phosphotransferase system, EIIB HCV85_024180 PF11941 Domain of unknown function (DUF3459) HCV85_024180 PF00128 Alpha amylase, catalytic domain HCV85_024185 PF02378 Phosphotransferase system, EIIC HCV85_024190 PF02056 Family 4 glycosyl hydrolase HCV85_024190 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV85_024195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_024210 PF03477 ATP cone domain HCV85_024210 PF13597 Anaerobic ribonucleoside-triphosphate reductase HCV85_024220 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HCV85_024225 PF04221 RelB antitoxin HCV85_024230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_024230 PF00874 PRD domain HCV85_024230 PF05043 Mga helix-turn-helix domain HCV85_024230 PF08279 HTH domain HCV85_024235 PF10282 Lactonase, 7-bladed beta-propeller HCV85_024240 PF07071 KDGP aldolase HCV85_024245 PF03841 L-seryl-tRNA selenium transferase HCV85_024250 PF01979 Amidohydrolase family HCV85_024285 PF07361 Cytochrome b562 HCV85_024290 PF01523 Putative modulator of DNA gyrase HCV85_024295 PF04751 Protein of unknown function (DUF615) HCV85_024315 PF01225 Mur ligase family, catalytic domain HCV85_024315 PF08245 Mur ligase middle domain HCV85_024315 PF02875 Mur ligase family, glutamate ligase domain HCV85_024320 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HCV85_024325 PF02653 Branched-chain amino acid transport system / permease component HCV85_024330 PF02653 Branched-chain amino acid transport system / permease component HCV85_024335 PF00005 ABC transporter HCV85_024340 PF13407 Periplasmic binding protein domain HCV85_024345 PF00719 Inorganic pyrophosphatase HCV85_024360 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HCV85_024365 PF04357 TamB, inner membrane protein subunit of TAM complex HCV85_024370 PF01103 Surface antigen HCV85_024370 PF07244 Surface antigen variable number repeat HCV85_024370 PF17243 POTRA domain TamA domain 1 HCV85_024375 PF01625 Peptide methionine sulfoxide reductase HCV85_024380 PF03471 Transporter associated domain HCV85_024380 PF01595 Cyclin M transmembrane N-terminal domain HCV85_024380 PF00571 CBS domain HCV85_024390 PF06526 Protein of unknown function (DUF1107) HCV85_024395 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HCV85_024400 PF00459 Inositol monophosphatase family HCV85_024405 PF02872 5'-nucleotidase, C-terminal domain HCV85_024405 PF00149 Calcineurin-like phosphoesterase HCV85_024410 PF01638 HxlR-like helix-turn-helix HCV85_024415 PF05368 NmrA-like family HCV85_024420 PF12833 Helix-turn-helix domain HCV85_024425 PF00892 EamA-like transporter family HCV85_024430 PF04405 Domain of Unknown function (DUF542) HCV85_024430 PF01814 Hemerythrin HHE cation binding domain HCV85_024435 PF00324 Amino acid permease HCV85_024440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HCV85_024440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCV85_024445 PF04225 Opacity-associated protein A LysM-like domain HCV85_024445 PF08525 Opacity-associated protein A N-terminal motif HCV85_024450 PF01281 Ribosomal protein L9, N-terminal domain HCV85_024450 PF03948 Ribosomal protein L9, C-terminal domain HCV85_024455 PF01084 Ribosomal protein S18 HCV85_024460 PF00436 Single-strand binding protein family HCV85_024465 PF01250 Ribosomal protein S6 HCV85_024470 PF07338 Protein of unknown function (DUF1471) HCV85_024475 PF07690 Major Facilitator Superfamily HCV85_024480 PF00596 Class II Aldolase and Adducin N-terminal domain HCV85_024485 PF01261 Xylose isomerase-like TIM barrel HCV85_024490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCV85_024495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_024500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_024505 PF03611 PTS system sugar-specific permease component HCV85_024515 PF08220 DeoR-like helix-turn-helix domain HCV85_024515 PF00455 DeoR C terminal sensor domain HCV85_024520 PF00326 Prolyl oligopeptidase family HCV85_024525 PF07338 Protein of unknown function (DUF1471) HCV85_024530 PF07338 Protein of unknown function (DUF1471) HCV85_024535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCV85_024535 PF02770 Acyl-CoA dehydrogenase, middle domain HCV85_024535 PF18158 Adaptive response protein AidB N-terminal domain HCV85_024540 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCV85_024540 PF00588 SpoU rRNA Methylase family HCV85_024545 PF08206 Ribonuclease B OB domain HCV85_024545 PF08461 Ribonuclease R winged-helix domain HCV85_024545 PF17876 Cold shock domain HCV85_024545 PF00773 RNB domain HCV85_024545 PF00575 S1 RNA binding domain HCV85_024550 PF02082 Transcriptional regulator HCV85_024555 PF00709 Adenylosuccinate synthetase HCV85_024560 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HCV85_024570 PF01145 SPFH domain / Band 7 family HCV85_024575 PF12221 Bacterial membrane protein N terminal HCV85_024575 PF01145 SPFH domain / Band 7 family HCV85_024580 PF01926 50S ribosome-binding GTPase HCV85_024580 PF13167 GTP-binding GTPase N-terminal HCV85_024580 PF16360 GTP-binding GTPase Middle Region HCV85_024585 PF17209 Hfq protein HCV85_024595 PF08676 MutL C terminal dimerisation domain HCV85_024595 PF01119 DNA mismatch repair protein, C-terminal domain HCV85_024600 PF01520 N-acetylmuramoyl-L-alanine amidase HCV85_024605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HCV85_024610 PF03853 YjeF-related protein N-terminus HCV85_024610 PF01256 Carbohydrate kinase HCV85_024615 PF08331 Domain of unknown function (DUF1730) HCV85_024635 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCV85_024640 PF00929 Exonuclease HCV85_024645 PF03193 RsgA GTPase HCV85_024650 PF02666 Phosphatidylserine decarboxylase HCV85_024655 PF12795 Mechanosensitive ion channel porin domain HCV85_024655 PF00924 Mechanosensitive ion channel HCV85_024655 PF12794 Mechanosensitive ion channel inner membrane domain 1 HCV85_024660 PF13520 Amino acid permease HCV85_024665 PF00152 tRNA synthetases class II (D, K and N) HCV85_024670 PF00890 FAD binding domain HCV85_024670 PF02910 Fumarate reductase flavoprotein C-term HCV85_024675 PF13085 2Fe-2S iron-sulfur cluster binding domain HCV85_024675 PF13183 4Fe-4S dicluster domain HCV85_024680 PF02300 Fumarate reductase subunit C HCV85_024685 PF02313 Fumarate reductase subunit D HCV85_024690 PF08212 Lipocalin-like domain HCV85_024695 PF00893 Small Multidrug Resistance protein HCV85_024700 PF08085 Entericidin EcnA/B family HCV85_024710 PF01132 Elongation factor P (EF-P) OB domain HCV85_024710 PF08207 Elongation factor P (EF-P) KOW-like domain HCV85_024710 PF09285 Elongation factor P, C-terminal HCV85_024715 PF04055 Radical SAM superfamily HCV85_024730 PF05598 Transposase domain (DUF772) HCV85_024730 PF01609 Transposase DDE domain HCV85_024750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_024750 PF00529 HlyD membrane-fusion protein of T1SS HCV85_024755 PF00664 ABC transporter transmembrane region HCV85_024755 PF00005 ABC transporter HCV85_024755 PF03412 Peptidase C39 family HCV85_024765 PF13698 Domain of unknown function (DUF4156) HCV85_024770 PF00118 TCP-1/cpn60 chaperonin family HCV85_024775 PF00166 Chaperonin 10 Kd subunit HCV85_024780 PF13520 Amino acid permease HCV85_024785 PF04186 FxsA cytoplasmic membrane protein HCV85_024790 PF00206 Lyase HCV85_024790 PF10415 Fumarase C C-terminus HCV85_024795 PF03605 Anaerobic c4-dicarboxylate membrane transporter HCV85_024800 PF03091 CutA1 divalent ion tolerance protein HCV85_024805 PF11412 Disulphide bond corrector protein DsbC HCV85_024805 PF02683 Cytochrome C biogenesis protein transmembrane region HCV85_024850 PF14883 Hypothetical glycosyl hydrolase family 13 HCV85_024850 PF01522 Polysaccharide deacetylase HCV85_024855 PF00535 Glycosyl transferase family 2 HCV85_024870 PF03741 Integral membrane protein TerC family HCV85_024880 PF00226 DnaJ domain HCV85_024880 PF01556 DnaJ C terminal domain HCV85_024900 PF06406 StbA protein HCV85_024915 PF02056 Family 4 glycosyl hydrolase HCV85_024915 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCV85_024920 PF12833 Helix-turn-helix domain HCV85_024925 PF00083 Sugar (and other) transporter HCV85_024925 PF08946 Osmosensory transporter coiled coil HCV85_024930 PF03831 PhnA domain HCV85_024930 PF08274 PhnA Zinc-Ribbon HCV85_024935 PF06983 3-demethylubiquinone-9 3-methyltransferase HCV85_024940 PF07702 UTRA domain HCV85_024940 PF00392 Bacterial regulatory proteins, gntR family HCV85_024945 PF06754 Phosphonate metabolism protein PhnG HCV85_024950 PF05845 Bacterial phosphonate metabolism protein (PhnH) HCV85_024955 PF05861 Bacterial phosphonate metabolism protein (PhnI) HCV85_024960 PF06007 Phosphonate metabolism protein PhnJ HCV85_024965 PF00005 ABC transporter HCV85_024970 PF00005 ABC transporter HCV85_024975 PF07969 Amidohydrolase family HCV85_024985 PF12706 Beta-lactamase superfamily domain HCV85_024995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_024995 PF13426 PAS domain HCV85_024995 PF00072 Response regulator receiver domain HCV85_025000 PF00005 ABC transporter HCV85_025005 PF02653 Branched-chain amino acid transport system / permease component HCV85_025010 PF13407 Periplasmic binding protein domain HCV85_025030 PF00072 Response regulator receiver domain HCV85_025030 PF00486 Transcriptional regulatory protein, C terminal HCV85_025040 PF08238 Sel1 repeat HCV85_025045 PF00375 Sodium:dicarboxylate symporter family HCV85_025055 PF13193 AMP-binding enzyme C-terminal domain HCV85_025055 PF16177 Acetyl-coenzyme A synthetase N-terminus HCV85_025055 PF00501 AMP-binding enzyme HCV85_025060 PF04341 Protein of unknown function, DUF485 HCV85_025065 PF00474 Sodium:solute symporter family HCV85_025080 PF00577 Outer membrane usher protein HCV85_025080 PF13954 PapC N-terminal domain HCV85_025080 PF13953 PapC C-terminal domain HCV85_025085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HCV85_025085 PF02753 Pili assembly chaperone PapD, C-terminal domain HCV85_025090 PF00419 Fimbrial protein HCV85_025095 PF04172 LrgB-like family HCV85_025100 PF03788 LrgA family HCV85_025105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_025105 PF03466 LysR substrate binding domain HCV85_025110 PF00999 Sodium/hydrogen exchanger family HCV85_025115 PF00860 Permease family HCV85_025120 PF00043 Glutathione S-transferase, C-terminal domain HCV85_025120 PF02798 Glutathione S-transferase, N-terminal domain HCV85_025125 PF09278 MerR, DNA binding HCV85_025125 PF00376 MerR family regulatory protein HCV85_025130 PF12833 Helix-turn-helix domain HCV85_025135 PF00563 EAL domain HCV85_025135 PF12792 CSS motif domain associated with EAL HCV85_025140 PF15940 Family of unknown function HCV85_025145 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_025160 PF08402 TOBE domain HCV85_025160 PF00005 ABC transporter HCV85_025165 PF00753 Metallo-beta-lactamase superfamily HCV85_025165 PF12706 Beta-lactamase superfamily domain HCV85_025170 PF00356 Bacterial regulatory proteins, lacI family HCV85_025175 PF00459 Inositol monophosphatase family HCV85_025185 PF07244 Surface antigen variable number repeat HCV85_025185 PF01103 Surface antigen HCV85_025195 PF07519 Tannase and feruloyl esterase HCV85_025200 PF12833 Helix-turn-helix domain HCV85_025205 PF00593 TonB dependent receptor HCV85_025205 PF07715 TonB-dependent Receptor Plug Domain HCV85_025210 PF01464 Transglycosylase SLT domain HCV85_025215 PF00436 Single-strand binding protein family HCV85_025220 PF00005 ABC transporter HCV85_025220 PF17755 UvrA DNA-binding domain HCV85_025220 PF17760 UvrA interaction domain HCV85_025225 PF04237 YjbR HCV85_025230 PF01894 Uncharacterised protein family UPF0047 HCV85_025235 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HCV85_025240 PF00155 Aminotransferase class I and II HCV85_025245 PF00842 Alanine racemase, C-terminal domain HCV85_025245 PF01168 Alanine racemase, N-terminal domain HCV85_025250 PF03796 DnaB-like helicase C terminal domain HCV85_025250 PF00772 DnaB-like helicase N terminal domain HCV85_025255 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_025255 PF00107 Zinc-binding dehydrogenase HCV85_025260 PF09583 Phage shock protein G (Phageshock_PspG) HCV85_025265 PF01207 Dihydrouridine synthase (Dus) HCV85_025275 PF01475 Ferric uptake regulator family HCV85_025280 PF05532 CsbD-like HCV85_025290 PF01554 MatE HCV85_025295 PF01726 LexA DNA binding domain HCV85_025295 PF00717 Peptidase S24-like HCV85_025300 PF01219 Prokaryotic diacylglycerol kinase HCV85_025305 PF01553 Acyltransferase HCV85_025310 PF01040 UbiA prenyltransferase family HCV85_025315 PF04345 Chorismate lyase HCV85_025320 PF07148 Maltose operon periplasmic protein precursor (MalM) HCV85_025325 PF02264 LamB porin HCV85_025330 PF00005 ABC transporter HCV85_025330 PF17912 MalK OB fold domain HCV85_025335 PF01547 Bacterial extracellular solute-binding protein HCV85_025340 PF14785 Maltose transport system permease protein MalF P2 domain HCV85_025340 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_025345 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_025350 PF06146 Phosphate-starvation-inducible E HCV85_025355 PF03313 Serine dehydratase alpha chain HCV85_025370 PF01042 Endoribonuclease L-PSP HCV85_025380 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_025380 PF14602 Hexapeptide repeat of succinyl-transferase HCV85_025380 PF12804 MobA-like NTP transferase domain HCV85_025385 PF00342 Phosphoglucose isomerase HCV85_025390 PF00696 Amino acid kinase family HCV85_025390 PF01842 ACT domain HCV85_025395 PF01758 Sodium Bile acid symporter family HCV85_025400 PF11656 YjbD family (DUF3811) HCV85_025405 PF01479 S4 domain HCV85_025405 PF00849 RNA pseudouridylate synthase HCV85_025410 PF04198 Putative sugar-binding domain HCV85_025410 PF13936 Helix-turn-helix domain HCV85_025415 PF00106 short chain dehydrogenase HCV85_025420 PF03610 PTS system fructose IIA component HCV85_025425 PF03830 PTS system sorbose subfamily IIB component HCV85_025430 PF03609 PTS system sorbose-specific iic component HCV85_025435 PF03613 PTS system mannose/fructose/sorbose family IID component HCV85_025440 PF00107 Zinc-binding dehydrogenase HCV85_025440 PF08240 Alcohol dehydrogenase GroES-like domain HCV85_025445 PF08501 Shikimate dehydrogenase substrate binding domain HCV85_025450 PF02690 Na+/Pi-cotransporter HCV85_025455 PF02310 B12 binding domain HCV85_025455 PF02607 B12 binding domain HCV85_025455 PF02965 Vitamin B12 dependent methionine synthase, activation domain HCV85_025455 PF00809 Pterin binding enzyme HCV85_025455 PF02574 Homocysteine S-methyltransferase HCV85_025460 PF01614 Bacterial transcriptional regulator HCV85_025460 PF09339 IclR helix-turn-helix domain HCV85_025465 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HCV85_025470 PF00463 Isocitrate lyase family HCV85_025475 PF01274 Malate synthase HCV85_025480 PF04204 Homoserine O-succinyltransferase HCV85_025485 PF13673 Acetyltransferase (GNAT) domain HCV85_025510 PF01808 AICARFT/IMPCHase bienzyme HCV85_025510 PF02142 MGS-like domain HCV85_025515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HCV85_025515 PF02844 Phosphoribosylglycinamide synthetase, N domain HCV85_025515 PF02843 Phosphoribosylglycinamide synthetase, C domain HCV85_025520 PF00072 Response regulator receiver domain HCV85_025520 PF02954 Bacterial regulatory protein, Fis family HCV85_025520 PF00158 Sigma-54 interaction domain HCV85_025525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_025525 PF00512 His Kinase A (phospho-acceptor) domain HCV85_025530 PF13801 Heavy-metal resistance HCV85_025535 PF07356 Protein of unknown function (DUF1481) HCV85_025540 PF00216 Bacterial DNA-binding protein HCV85_025545 PF04222 Protein of unknown function (DUF416) HCV85_025550 PF04493 Endonuclease V HCV85_025555 PF01208 Uroporphyrinogen decarboxylase (URO-D) HCV85_025560 PF00293 NUDIX domain HCV85_025560 PF09297 NADH pyrophosphatase zinc ribbon domain HCV85_025565 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HCV85_025570 PF13667 ThiC-associated domain HCV85_025570 PF01964 Radical SAM ThiC family HCV85_025575 PF02581 Thiamine monophosphate synthase HCV85_025580 PF00899 ThiF family HCV85_025585 PF02597 ThiS family HCV85_025590 PF05690 Thiazole biosynthesis protein ThiG HCV85_025595 PF04055 Radical SAM superfamily HCV85_025595 PF06968 Biotin and Thiamin Synthesis associated domain HCV85_025600 PF00990 Diguanylate cyclase, GGDEF domain HCV85_025605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCV85_025610 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCV85_025615 PF03605 Anaerobic c4-dicarboxylate membrane transporter HCV85_025620 PF04983 RNA polymerase Rpb1, domain 3 HCV85_025620 PF04998 RNA polymerase Rpb1, domain 5 HCV85_025620 PF05000 RNA polymerase Rpb1, domain 4 HCV85_025620 PF00623 RNA polymerase Rpb1, domain 2 HCV85_025620 PF04997 RNA polymerase Rpb1, domain 1 HCV85_025625 PF00562 RNA polymerase Rpb2, domain 6 HCV85_025625 PF04563 RNA polymerase beta subunit HCV85_025625 PF04561 RNA polymerase Rpb2, domain 2 HCV85_025625 PF04560 RNA polymerase Rpb2, domain 7 HCV85_025625 PF04565 RNA polymerase Rpb2, domain 3 HCV85_025625 PF10385 RNA polymerase beta subunit external 1 domain HCV85_025630 PF00542 Ribosomal protein L7/L12 C-terminal domain HCV85_025630 PF16320 Ribosomal protein L7/L12 dimerisation domain HCV85_025635 PF00466 Ribosomal protein L10 HCV85_025640 PF00687 Ribosomal protein L1p/L10e family HCV85_025645 PF00298 Ribosomal protein L11, RNA binding domain HCV85_025645 PF03946 Ribosomal protein L11, N-terminal domain HCV85_025650 PF02357 Transcription termination factor nusG HCV85_025650 PF00467 KOW motif HCV85_025655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HCV85_025660 PF00009 Elongation factor Tu GTP binding domain HCV85_025660 PF03144 Elongation factor Tu domain 2 HCV85_025660 PF03143 Elongation factor Tu C-terminal domain HCV85_025685 PF00485 Phosphoribulokinase / Uridine kinase family HCV85_025690 PF08279 HTH domain HCV85_025690 PF03099 Biotin/lipoate A/B protein ligase family HCV85_025690 PF02237 Biotin protein ligase C terminal domain HCV85_025695 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HCV85_025695 PF01565 FAD binding domain HCV85_025725 PF12724 Flavodoxin domain HCV85_025730 PF02386 Cation transport protein HCV85_025735 PF01205 Uncharacterized protein family UPF0029 HCV85_025735 PF09186 Domain of unknown function (DUF1949) HCV85_025740 PF00557 Metallopeptidase family M24 HCV85_025745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCV85_025745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCV85_025745 PF00378 Enoyl-CoA hydratase/isomerase HCV85_025750 PF00108 Thiolase, N-terminal domain HCV85_025750 PF02803 Thiolase, C-terminal domain HCV85_025755 PF00970 Oxidoreductase FAD-binding domain HCV85_025755 PF00175 Oxidoreductase NAD-binding domain HCV85_025760 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCV85_025765 PF02357 Transcription termination factor nusG HCV85_025770 PF01026 TatD related DNase HCV85_025775 PF00902 Sec-independent protein translocase protein (TatC) HCV85_025785 PF02416 mttA/Hcf106 family HCV85_025790 PF03109 ABC1 family HCV85_025795 PF02036 SCP-2 sterol transfer family HCV85_025800 PF01209 ubiE/COQ5 methyltransferase family HCV85_025805 PF02646 RmuC family HCV85_025810 PF01048 Phosphorylase superfamily HCV85_025815 PF01738 Dienelactone hydrolase family HCV85_025820 PF01717 Cobalamin-independent synthase, Catalytic domain HCV85_025820 PF08267 Cobalamin-independent synthase, N-terminal domain HCV85_025825 PF03466 LysR substrate binding domain HCV85_025825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_025830 PF00892 EamA-like transporter family HCV85_025840 PF12146 Serine aminopeptidase, S33 HCV85_025845 PF01810 LysE type translocator HCV85_025850 PF04754 Putative transposase, YhgA-like HCV85_025855 PF01810 LysE type translocator HCV85_025860 PF09382 RQC domain HCV85_025860 PF16124 RecQ zinc-binding HCV85_025860 PF00271 Helicase conserved C-terminal domain HCV85_025860 PF00270 DEAD/DEAH box helicase HCV85_025860 PF00570 HRDC domain HCV85_025865 PF02253 Phospholipase A1 HCV85_025870 PF03061 Thioesterase superfamily HCV85_025875 PF00892 EamA-like transporter family HCV85_025880 PF01544 CorA-like Mg2+ transporter protein HCV85_025885 PF00580 UvrD/REP helicase N-terminal domain HCV85_025885 PF13361 UvrD-like helicase C-terminal domain HCV85_025890 PF13419 Haloacid dehalogenase-like hydrolase HCV85_025895 PF02899 Phage integrase, N-terminal SAM-like domain HCV85_025895 PF00589 Phage integrase family HCV85_025900 PF04340 Protein of unknown function, DUF484 HCV85_025905 PF01678 Diaminopimelate epimerase HCV85_025910 PF13627 Prokaryotic lipoprotein-attachment site HCV85_025915 PF01491 Frataxin-like domain HCV85_025920 PF12633 Adenylate cyclase NT domain HCV85_025920 PF01295 Adenylate cyclase, class-I HCV85_025925 PF03900 Porphobilinogen deaminase, C-terminal domain HCV85_025925 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HCV85_025930 PF02602 Uroporphyrinogen-III synthase HemD HCV85_025935 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HCV85_025940 PF07719 Tetratricopeptide repeat HCV85_025940 PF07219 HemY protein N-terminus HCV85_025965 PF00324 Amino acid permease HCV85_025970 PF03808 Glycosyl transferase WecB/TagA/CpsF family HCV85_025975 PF06899 WzyE protein, O-antigen assembly polymerase HCV85_025980 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 HCV85_025985 PF01943 Polysaccharide biosynthesis protein HCV85_025990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCV85_026000 PF00483 Nucleotidyl transferase HCV85_026005 PF16363 GDP-mannose 4,6 dehydratase HCV85_026010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCV85_026010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCV85_026010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCV85_026015 PF02350 UDP-N-acetylglucosamine 2-epimerase HCV85_026020 PF02706 Chain length determinant protein HCV85_026025 PF00953 Glycosyl transferase family 4 HCV85_026030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCV85_026030 PF07498 Rho termination factor, N-terminal domain HCV85_026030 PF07497 Rho termination factor, RNA-binding domain HCV85_026035 PF00085 Thioredoxin HCV85_026040 PF00270 DEAD/DEAH box helicase HCV85_026040 PF00271 Helicase conserved C-terminal domain HCV85_026045 PF02541 Ppx/GppA phosphatase family HCV85_026050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_026050 PF03466 LysR substrate binding domain HCV85_026055 PF01609 Transposase DDE domain HCV85_026055 PF05598 Transposase domain (DUF772) HCV85_026060 PF04474 Protein of unknown function (DUF554) HCV85_026065 PF13361 UvrD-like helicase C-terminal domain HCV85_026065 PF00580 UvrD/REP helicase N-terminal domain HCV85_026080 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HCV85_026080 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HCV85_026085 PF03466 LysR substrate binding domain HCV85_026085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_026090 PF00291 Pyridoxal-phosphate dependent enzyme HCV85_026090 PF00585 C-terminal regulatory domain of Threonine dehydratase HCV85_026095 PF00920 Dehydratase family HCV85_026100 PF01063 Amino-transferase class IV HCV85_026110 PF00205 Thiamine pyrophosphate enzyme, central domain HCV85_026110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCV85_026110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCV85_026115 PF08046 IlvGEDA operon leader peptide HCV85_026120 PF01078 Magnesium chelatase, subunit ChlI HCV85_026120 PF13335 Magnesium chelatase, subunit ChlI C-terminal HCV85_026125 PF04219 Protein of unknown function, DUF HCV85_026130 PF03466 LysR substrate binding domain HCV85_026130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_026170 PF01177 Asp/Glu/Hydantoin racemase HCV85_026175 PF07715 TonB-dependent Receptor Plug Domain HCV85_026175 PF00593 TonB dependent receptor HCV85_026180 PF05958 tRNA (Uracil-5-)-methyltransferase HCV85_026185 PF07226 Protein of unknown function (DUF1422) HCV85_026190 PF00440 Bacterial regulatory proteins, tetR family HCV85_026195 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_026195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV85_026200 PF03466 LysR substrate binding domain HCV85_026200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_026205 PF00206 Lyase HCV85_026205 PF14698 Argininosuccinate lyase C-terminal HCV85_026210 PF00696 Amino acid kinase family HCV85_026215 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCV85_026215 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCV85_026220 PF01546 Peptidase family M20/M25/M40 HCV85_026220 PF07687 Peptidase dimerisation domain HCV85_026225 PF00311 Phosphoenolpyruvate carboxylase HCV85_026230 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HCV85_026235 PF12833 Helix-turn-helix domain HCV85_026240 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCV85_026245 PF00465 Iron-containing alcohol dehydrogenase HCV85_026250 PF00892 EamA-like transporter family HCV85_026255 PF02219 Methylenetetrahydrofolate reductase HCV85_026260 PF03466 LysR substrate binding domain HCV85_026260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_026265 PF02627 Carboxymuconolactone decarboxylase family HCV85_026270 PF00149 Calcineurin-like phosphoesterase HCV85_026270 PF02872 5'-nucleotidase, C-terminal domain HCV85_026280 PF00742 Homoserine dehydrogenase HCV85_026280 PF03447 Homoserine dehydrogenase, NAD binding domain HCV85_026280 PF00696 Amino acid kinase family HCV85_026285 PF01053 Cys/Met metabolism PLP-dependent enzyme HCV85_026290 PF01340 Met Apo-repressor, MetJ HCV85_026295 PF01197 Ribosomal protein L31 HCV85_026300 PF17764 3′ DNA-binding domain (3′BD) HCV85_026300 PF00271 Helicase conserved C-terminal domain HCV85_026300 PF00270 DEAD/DEAH box helicase HCV85_026300 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HCV85_026300 PF18074 Primosomal protein N C-terminal domain HCV85_026305 PF00356 Bacterial regulatory proteins, lacI family HCV85_026310 PF05036 Sporulation related domain HCV85_026315 PF00227 Proteasome subunit HCV85_026320 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_026320 PF10431 C-terminal, D2-small domain, of ClpB protein HCV85_026320 PF07724 AAA domain (Cdc48 subfamily) HCV85_026325 PF01040 UbiA prenyltransferase family HCV85_026330 PF03737 Aldolase/RraA HCV85_026335 PF00365 Phosphofructokinase HCV85_026340 PF16916 Dimerisation domain of Zinc Transporter HCV85_026340 PF01545 Cation efflux family HCV85_026345 PF07813 LTXXQ motif family protein HCV85_026350 PF00486 Transcriptional regulatory protein, C terminal HCV85_026350 PF00072 Response regulator receiver domain HCV85_026355 PF16527 Two-component sensor protein CpxA, periplasmic domain HCV85_026355 PF00512 His Kinase A (phospho-acceptor) domain HCV85_026355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_026355 PF00672 HAMP domain HCV85_026360 PF03473 MOSC domain HCV85_026360 PF03475 3-alpha domain HCV85_026365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCV85_026365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCV85_026370 PF06379 L-rhamnose-proton symport protein (RhaT) HCV85_026375 PF02311 AraC-like ligand binding domain HCV85_026375 PF12833 Helix-turn-helix domain HCV85_026380 PF02311 AraC-like ligand binding domain HCV85_026380 PF12833 Helix-turn-helix domain HCV85_026385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCV85_026385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCV85_026390 PF06134 L-rhamnose isomerase (RhaA) HCV85_026395 PF00596 Class II Aldolase and Adducin N-terminal domain HCV85_026400 PF13407 Periplasmic binding protein domain HCV85_026405 PF00005 ABC transporter HCV85_026410 PF02653 Branched-chain amino acid transport system / permease component HCV85_026415 PF02653 Branched-chain amino acid transport system / permease component HCV85_026420 PF00465 Iron-containing alcohol dehydrogenase HCV85_026425 PF05336 L-rhamnose mutarotase HCV85_026430 PF01306 LacY proton/sugar symporter HCV85_026435 PF16874 Glycosyl hydrolase family 36 C-terminal domain HCV85_026435 PF16875 Glycosyl hydrolase family 36 N-terminal domain HCV85_026440 PF00356 Bacterial regulatory proteins, lacI family HCV85_026440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCV85_026465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCV85_026475 PF01116 Fructose-bisphosphate aldolase class-II HCV85_026480 PF03611 PTS system sugar-specific permease component HCV85_026490 PF00365 Phosphofructokinase HCV85_026500 PF02634 FdhD/NarQ family HCV85_026510 PF09163 Formate dehydrogenase N, transmembrane HCV85_026510 PF13247 4Fe-4S dicluster domain HCV85_026515 PF01292 Prokaryotic cytochrome b561 HCV85_026520 PF04216 Protein involved in formate dehydrogenase formation HCV85_026535 PF07859 alpha/beta hydrolase fold HCV85_026540 PF09500 Putative thioesterase (yiiD_Cterm) HCV85_026540 PF00583 Acetyltransferase (GNAT) family HCV85_026545 PF02580 D-Tyr-tRNA(Tyr) deacylase HCV85_026550 PF03631 Virulence factor BrkB HCV85_026555 PF13419 Haloacid dehalogenase-like hydrolase HCV85_026560 PF00009 Elongation factor Tu GTP binding domain HCV85_026560 PF03144 Elongation factor Tu domain 2 HCV85_026560 PF00679 Elongation factor G C-terminus HCV85_026565 PF00120 Glutamine synthetase, catalytic domain HCV85_026565 PF03951 Glutamine synthetase, beta-Grasp domain HCV85_026570 PF00512 His Kinase A (phospho-acceptor) domain HCV85_026570 PF00989 PAS fold HCV85_026570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_026575 PF00158 Sigma-54 interaction domain HCV85_026575 PF02954 Bacterial regulatory protein, Fis family HCV85_026575 PF00072 Response regulator receiver domain HCV85_026585 PF06969 HemN C-terminal domain HCV85_026585 PF04055 Radical SAM superfamily HCV85_026590 PF04220 Der GTPase activator (YihI) HCV85_026595 PF01926 50S ribosome-binding GTPase HCV85_026600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCV85_026600 PF01612 3'-5' exonuclease HCV85_026600 PF00476 DNA polymerase family A HCV85_026600 PF01367 5'-3' exonuclease, C-terminal SAM fold HCV85_026605 PF01553 Acyltransferase HCV85_026610 PF01323 DSBA-like thioredoxin domain HCV85_026615 PF01636 Phosphotransferase enzyme family HCV85_026620 PF06288 Protein of unknown function (DUF1040) HCV85_026625 PF12804 MobA-like NTP transferase domain HCV85_026630 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HCV85_026655 PF07729 FCD domain HCV85_026655 PF00392 Bacterial regulatory proteins, gntR family HCV85_026660 PF07690 Major Facilitator Superfamily HCV85_026665 PF00356 Bacterial regulatory proteins, lacI family HCV85_026670 PF00294 pfkB family carbohydrate kinase HCV85_026675 PF13407 Periplasmic binding protein domain HCV85_026680 PF02653 Branched-chain amino acid transport system / permease component HCV85_026685 PF00005 ABC transporter HCV85_026690 PF05025 RbsD / FucU transport protein family HCV85_026695 PF02705 K+ potassium transporter HCV85_026700 PF12592 Protein of unknown function (DUF3763) HCV85_026700 PF17868 AAA lid domain HCV85_026700 PF07728 AAA domain (dynein-related subfamily) HCV85_026705 PF05762 VWA domain containing CoxE-like protein HCV85_026710 PF03590 Aspartate-ammonia ligase HCV85_026715 PF01037 Lrp/AsnC ligand binding domain HCV85_026720 PF00258 Flavodoxin HCV85_026725 PF01134 Glucose inhibited division protein A HCV85_026725 PF13932 GidA associated domain HCV85_026730 PF02527 rRNA small subunit methyltransferase G HCV85_026735 PF03899 ATP synthase I chain HCV85_026740 PF00119 ATP synthase A chain HCV85_026745 PF00137 ATP synthase subunit C HCV85_026750 PF00430 ATP synthase B/B' CF(0) HCV85_026755 PF00213 ATP synthase delta (OSCP) subunit HCV85_026760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCV85_026760 PF00306 ATP synthase alpha/beta chain, C terminal domain HCV85_026760 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCV85_026765 PF00231 ATP synthase HCV85_026770 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCV85_026770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCV85_026775 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HCV85_026775 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HCV85_026780 PF00132 Bacterial transferase hexapeptide (six repeats) HCV85_026780 PF12804 MobA-like NTP transferase domain HCV85_026785 PF01380 SIS domain HCV85_026790 PF12849 PBP superfamily domain HCV85_026795 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_026800 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_026805 PF00005 ABC transporter HCV85_026810 PF01895 PhoU domain HCV85_026815 PF02264 LamB porin HCV85_026815 PF11471 Maltoporin periplasmic N-terminal extension HCV85_026820 PF00756 Putative esterase HCV85_026820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCV85_026825 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCV85_026830 PF13419 Haloacid dehalogenase-like hydrolase HCV85_026835 PF00860 Permease family HCV85_026840 PF03358 NADPH-dependent FMN reductase HCV85_026850 PF03466 LysR substrate binding domain HCV85_026850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_026855 PF07690 Major Facilitator Superfamily HCV85_026865 PF01926 50S ribosome-binding GTPase HCV85_026865 PF12631 MnmE helical domain HCV85_026865 PF10396 GTP-binding protein TrmE N-terminus HCV85_026870 PF02096 60Kd inner membrane protein HCV85_026870 PF14849 YidC periplasmic domain HCV85_026875 PF01809 Putative membrane protein insertion efficiency factor HCV85_026880 PF00825 Ribonuclease P HCV85_026885 PF00468 Ribosomal protein L34 HCV85_026890 PF01051 Initiator Replication protein HCV85_026895 PF00589 Phage integrase family HCV85_026900 PF13185 GAF domain HCV85_026900 PF00990 Diguanylate cyclase, GGDEF domain HCV85_026905 PF00498 FHA domain HCV85_026905 PF00990 Diguanylate cyclase, GGDEF domain HCV85_026905 PF00563 EAL domain HCV85_026910 PF13737 Transposase DDE domain HCV85_026920 PF00563 EAL domain HCV85_026920 PF12792 CSS motif domain associated with EAL HCV85_026925 PF10011 Predicted membrane protein (DUF2254) HCV85_026930 PF02028 BCCT, betaine/carnitine/choline family transporter HCV85_026960 PF00672 HAMP domain HCV85_026960 PF00512 His Kinase A (phospho-acceptor) domain HCV85_026960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_026965 PF00486 Transcriptional regulatory protein, C terminal HCV85_026965 PF00072 Response regulator receiver domain HCV85_026970 PF02321 Outer membrane efflux protein HCV85_026975 PF11604 Copper binding periplasmic protein CusF HCV85_026980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCV85_026985 PF00873 AcrB/AcrD/AcrF family HCV85_026995 PF04945 YHS domain HCV85_027005 PF01476 LysM domain HCV85_027005 PF08525 Opacity-associated protein A N-terminal motif HCV85_027005 PF01551 Peptidase family M23 HCV85_027015 PF07731 Multicopper oxidase HCV85_027015 PF00394 Multicopper oxidase HCV85_027015 PF07732 Multicopper oxidase HCV85_027020 PF05275 Copper resistance protein B precursor (CopB) HCV85_027025 PF04234 CopC domain HCV85_027030 PF05425 Copper resistance protein D HCV85_027035 PF00486 Transcriptional regulatory protein, C terminal HCV85_027035 PF00072 Response regulator receiver domain HCV85_027040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCV85_027040 PF00672 HAMP domain HCV85_027040 PF00512 His Kinase A (phospho-acceptor) domain HCV85_027060 PF00230 Major intrinsic protein HCV85_027075 PF03358 NADPH-dependent FMN reductase HCV85_027100 PF03960 ArsC family HCV85_027105 PF02040 Arsenical pump membrane protein HCV85_027110 PF02374 Anion-transporting ATPase HCV85_027115 PF06953 Arsenical resistance operon trans-acting repressor ArsD HCV85_027120 PF01022 Bacterial regulatory protein, arsR family HCV85_027145 PF05321 Haemolysin expression modulating protein HCV85_027180 PF01435 Peptidase family M48 HCV85_027195 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_027195 PF07724 AAA domain (Cdc48 subfamily) HCV85_027195 PF17871 AAA lid domain HCV85_027195 PF10431 C-terminal, D2-small domain, of ClpB protein HCV85_027195 PF02861 Clp amino terminal domain, pathogenicity island component HCV85_027200 PF00011 Hsp20/alpha crystallin family HCV85_027205 PF12728 Helix-turn-helix domain HCV85_027230 PF01609 Transposase DDE domain HCV85_027230 PF05598 Transposase domain (DUF772) HCV85_027240 PF03466 LysR substrate binding domain HCV85_027240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCV85_027245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCV85_027245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCV85_027250 PF00528 Binding-protein-dependent transport system inner membrane component HCV85_027260 PF00005 ABC transporter HCV85_027270 PF13610 DDE domain HCV85_027280 PF08220 DeoR-like helix-turn-helix domain HCV85_027280 PF00455 DeoR C terminal sensor domain HCV85_027285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCV85_027285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCV85_027340 PF00816 H-NS histone family HCV85_027345 PF01751 Toprim domain HCV85_027345 PF01131 DNA topoisomerase HCV85_027350 PF00004 ATPase family associated with various cellular activities (AAA) HCV85_027350 PF01434 Peptidase family M41 HCV85_027350 PF06480 FtsH Extracellular HCV85_027350 PF17862 AAA+ lid domain HCV85_027355 PF00565 Staphylococcal nuclease homologue HCV85_027380 PF00437 Type II/IV secretion system protein HCV85_027390 PF03743 Bacterial conjugation TrbI-like protein HCV85_027420 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HCV85_027495 PF00684 DnaJ central domain HCV85_027495 PF01556 DnaJ C terminal domain HCV85_027495 PF00226 DnaJ domain HCV85_027505 PF01051 Initiator Replication protein HCV85_027535 PF13614 AAA domain HCV85_027540 PF00239 Resolvase, N terminal domain HCV85_027540 PF02796 Helix-turn-helix domain of resolvase HCV85_027550 PF13610 DDE domain HCV85_027560 PF13610 DDE domain HCV85_027565 PF01636 Phosphotransferase enzyme family HCV85_027570 PF13610 DDE domain HCV85_027575 PF01636 Phosphotransferase enzyme family HCV85_027590 PF13610 DDE domain HCV85_027600 PF03551 Transcriptional regulator PadR-like family HCV85_027615 PF00809 Pterin binding enzyme HCV85_027620 PF00893 Small Multidrug Resistance protein HCV85_027625 PF13427 Domain of unknown function (DUF4111) HCV85_027635 PF00186 Dihydrofolate reductase HCV85_027640 PF13495 Phage integrase, N-terminal SAM-like domain HCV85_027640 PF00589 Phage integrase family HCV85_027645 PF11809 Domain of unknown function (DUF3330) HCV85_027645 PF00563 EAL domain HCV85_027650 PF00239 Resolvase, N terminal domain HCV85_027650 PF02796 Helix-turn-helix domain of resolvase HCV85_027655 PF01526 Tn3 transposase DDE domain HCV85_027655 PF13700 Domain of unknown function (DUF4158) HCV85_027665 PF00302 Chloramphenicol acetyltransferase HCV85_027680 PF13728 F plasmid transfer operon protein HCV85_027685 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) HCV85_027690 PF13728 F plasmid transfer operon protein HCV85_027700 PF11100 Conjugal transfer protein TrbE HCV85_027705 PF06986 Type-1V conjugative transfer system mating pair stabilisation HCV85_027710 PF09673 Type-F conjugative transfer system pilin assembly protein HCV85_027715 PF06834 TraU protein HCV85_027720 PF12477 Sex factor F TraW protein N terminal HCV85_027725 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) HCV85_027730 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer HCV85_027765 PF09676 Type IV conjugative transfer system lipoprotein (TraV) HCV85_027775 PF03743 Bacterial conjugation TrbI-like protein HCV85_027780 PF06586 TraK protein HCV85_027785 PF05309 TraE protein HCV85_027790 PF05598 Transposase domain (DUF772) HCV85_027790 PF01609 Transposase DDE domain HCV85_027795 PF05509 TraY domain HCV85_027805 PF05261 TraM protein, DNA-binding HCV85_027810 PF01464 Transglycosylase SLT domain HCV85_027820 PF06067 Domain of unknown function (DUF932) HCV85_027825 PF01381 Helix-turn-helix HCV85_027865 PF01848 Hok/gef family HCV85_027890 PF06290 Plasmid SOS inhibition protein (PsiB) HCV85_027895 PF02195 ParB-like nuclease domain HCV85_027900 PF06006 Bacterial protein of unknown function (DUF905) HCV85_027905 PF00436 Single-strand binding protein family HCV85_027940 PF03230 Antirestriction protein HCV85_027950 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HCV85_027955 PF00717 Peptidase S24-like HCV85_027960 PF13438 Domain of unknown function (DUF4113) HCV85_027960 PF00817 impB/mucB/samB family HCV85_027960 PF11799 impB/mucB/samB family C-terminal domain HCV85_027975 PF02195 ParB-like nuclease domain HCV85_027975 PF18090 Centromere-binding protein HTH domain HCV85_027980 PF13614 AAA domain HCV85_027985 PF01051 Initiator Replication protein HCV85_027990 PF13614 AAA domain HCV85_027990 PF18607 ParA helix turn helix domain HCV85_027995 PF02195 ParB-like nuclease domain HCV85_027995 PF08775 ParB family HCV85_028010 PF02384 N-6 DNA Methylase HCV85_028040 PF00589 Phage integrase family HCV85_028075 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HCV85_028080 PF01850 PIN domain HCV85_028085 PF02463 RecF/RecN/SMC N terminal domain HCV85_028095 PF00403 Heavy-metal-associated domain HCV85_028100 PF03203 MerC mercury resistance protein HCV85_028105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCV85_028105 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCV85_028105 PF00403 Heavy-metal-associated domain HCV85_028110 PF13411 MerR HTH family regulatory protein HCV85_028115 PF05052 MerE protein HCV85_028120 PF00563 EAL domain HCV85_028120 PF03707 Bacterial signalling protein N terminal repeat HCV85_028120 PF13188 PAS domain HCV85_028120 PF00990 Diguanylate cyclase, GGDEF domain HCV85_028155 PF13610 DDE domain HCV85_028160 PF01526 Tn3 transposase DDE domain HCV85_028160 PF13700 Domain of unknown function (DUF4158) HCV85_028165 PF00239 Resolvase, N terminal domain HCV85_028165 PF02796 Helix-turn-helix domain of resolvase HCV85_028185 PF01609 Transposase DDE domain HCV85_028185 PF13808 DDE_Tnp_1-associated HCV85_028200 PF01695 IstB-like ATP binding protein HCV85_028205 PF02796 Helix-turn-helix domain of resolvase HCV85_028205 PF00665 Integrase core domain HCV85_028215 PF00589 Phage integrase family HCV85_028215 PF02899 Phage integrase, N-terminal SAM-like domain HCV85_028230 PF04754 Putative transposase, YhgA-like HCV85_028245 PF02387 IncFII RepA protein family HCV85_028255 PF10723 Replication regulatory protein RepB HCV85_028285 PF04352 ProQ/FINO family HCV85_028285 PF12602 Fertility inhibition protein N terminal HCV85_028290 PF05857 TraX protein HCV85_028295 PF08751 TrwC relaxase HCV85_028295 PF18340 DNA relaxase TraI 2B/2B-like domain HCV85_028295 PF18272 single-stranded DNA binding TraI N-terminal subdomain HCV85_028295 PF07057 DNA helicase TraI HCV85_028310 PF05818 Enterobacterial TraT complement resistance protein HCV85_028320 PF07916 TraG-like protein, N-terminal region HCV85_028325 PF06122 Conjugative relaxosome accessory transposon protein HCV85_028335 PF13728 F plasmid transfer operon protein HCV85_028340 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) HCV85_028345 PF13728 F plasmid transfer operon protein HCV85_028360 PF11100 Conjugal transfer protein TrbE HCV85_028370 PF06986 Type-1V conjugative transfer system mating pair stabilisation HCV85_028375 PF09673 Type-F conjugative transfer system pilin assembly protein HCV85_028380 PF06834 TraU protein HCV85_028390 PF12477 Sex factor F TraW protein N terminal HCV85_028395 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) HCV85_028400 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer HCV85_028435 PF09676 Type IV conjugative transfer system lipoprotein (TraV) HCV85_028440 PF03743 Bacterial conjugation TrbI-like protein HCV85_028445 PF06586 TraK protein HCV85_028450 PF05309 TraE protein HCV85_028455 PF07178 TraL protein HCV85_028460 PF05513 TraA HCV85_028465 PF05509 TraY domain HCV85_028475 PF05261 TraM protein, DNA-binding HCV85_028480 PF01464 Transglycosylase SLT domain HCV85_028490 PF06067 Domain of unknown function (DUF932) HCV85_028540 PF06290 Plasmid SOS inhibition protein (PsiB) HCV85_028545 PF02195 ParB-like nuclease domain HCV85_028550 PF06006 Bacterial protein of unknown function (DUF905) HCV85_028555 PF00436 Single-strand binding protein family HCV85_028585 PF06440 DNA polymerase III, theta subunit HCV85_028600 PF03230 Antirestriction protein HCV85_028610 PF07128 Protein of unknown function (DUF1380) HCV85_028620 PF01555 DNA methylase HCV85_028635 PF06406 StbA protein HCV85_028640 PF00717 Peptidase S24-like HCV85_028645 PF11799 impB/mucB/samB family C-terminal domain HCV85_028645 PF13438 Domain of unknown function (DUF4113) HCV85_028645 PF00817 impB/mucB/samB family HCV85_028665 PF01815 Rop protein HCV85_028690 PF13700 Domain of unknown function (DUF4158) HCV85_028690 PF01526 Tn3 transposase DDE domain HCV85_028695 PF00239 Resolvase, N terminal domain HCV85_028695 PF02796 Helix-turn-helix domain of resolvase HCV85_028710 PF13610 DDE domain HCV85_028725 PF03513 Cloacin immunity protein HCV85_028730 PF02402 Lysis protein