locus-tag class description C6M09_00005 PF00308 Bacterial dnaA protein C6M09_00005 PF08299 Bacterial dnaA protein helix-turn-helix C6M09_00005 PF11638 DnaA N-terminal domain C6M09_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C6M09_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C6M09_00010 PF02767 DNA polymerase III beta subunit, central domain C6M09_00015 PF02463 RecF/RecN/SMC N terminal domain C6M09_00020 PF00204 DNA gyrase B C6M09_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_00020 PF01751 Toprim domain C6M09_00020 PF00986 DNA gyrase B subunit, carboxyl terminus C6M09_00020 PF18053 DNA gyrase B subunit insert domain C6M09_00040 PF07729 FCD domain C6M09_00040 PF00392 Bacterial regulatory proteins, gntR family C6M09_00045 PF05035 2-keto-3-deoxy-galactonokinase C6M09_00050 PF01081 KDPG and KHG aldolase C6M09_00060 PF01609 Transposase DDE domain C6M09_00060 PF05598 Transposase domain (DUF772) C6M09_00070 PF07690 Major Facilitator Superfamily C6M09_00075 PF12566 Protein of unknown function (DUF3748) C6M09_00075 PF07676 WD40-like Beta Propeller Repeat C6M09_00080 PF07119 Protein of unknown function (DUF1375) C6M09_00085 PF00011 Hsp20/alpha crystallin family C6M09_00090 PF00011 Hsp20/alpha crystallin family C6M09_00100 PF06826 Predicted Permease Membrane Region C6M09_00100 PF02080 TrkA-C domain C6M09_00105 PF07702 UTRA domain C6M09_00105 PF00392 Bacterial regulatory proteins, gntR family C6M09_00110 PF00367 phosphotransferase system, EIIB C6M09_00110 PF02378 Phosphotransferase system, EIIC C6M09_00115 PF02056 Family 4 glycosyl hydrolase C6M09_00115 PF11975 Family 4 glycosyl hydrolase C-terminal domain C6M09_00120 PF02656 Domain of unknown function (DUF202) C6M09_00125 PF02656 Domain of unknown function (DUF202) C6M09_00135 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_00140 PF02447 GntP family permease C6M09_00150 PF03466 LysR substrate binding domain C6M09_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_00155 PF07690 Major Facilitator Superfamily C6M09_00185 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_00185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_00185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_00190 PF01842 ACT domain C6M09_00195 PF00072 Response regulator receiver domain C6M09_00195 PF00196 Bacterial regulatory proteins, luxR family C6M09_00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_00200 PF05231 MASE1 C6M09_00200 PF07730 Histidine kinase C6M09_00205 PF07690 Major Facilitator Superfamily C6M09_00210 PF07690 Major Facilitator Superfamily C6M09_00215 PF06711 Protein of unknown function (DUF1198) C6M09_00230 PF07690 Major Facilitator Superfamily C6M09_00240 PF00266 Aminotransferase class-V C6M09_00245 PF07702 UTRA domain C6M09_00245 PF00392 Bacterial regulatory proteins, gntR family C6M09_00250 PF01547 Bacterial extracellular solute-binding protein C6M09_00255 PF00005 ABC transporter C6M09_00255 PF08402 TOBE domain C6M09_00260 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_00270 PF02264 LamB porin C6M09_00275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C6M09_00280 PF02378 Phosphotransferase system, EIIC C6M09_00280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_00285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_00290 PF00356 Bacterial regulatory proteins, lacI family C6M09_00295 PF07690 Major Facilitator Superfamily C6M09_00300 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit C6M09_00300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C6M09_00305 PF03466 LysR substrate binding domain C6M09_00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_00310 PF02585 GlcNAc-PI de-N-acetylase C6M09_00315 PF03737 Aldolase/RraA C6M09_00320 PF04303 PrpF protein C6M09_00335 PF00892 EamA-like transporter family C6M09_00340 PF02378 Phosphotransferase system, EIIC C6M09_00340 PF00367 phosphotransferase system, EIIB C6M09_00345 PF13580 SIS domain C6M09_00350 PF07690 Major Facilitator Superfamily C6M09_00355 PF02321 Outer membrane efflux protein C6M09_00365 PF13610 DDE domain C6M09_00375 PF12833 Helix-turn-helix domain C6M09_00395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_00395 PF03466 LysR substrate binding domain C6M09_00400 PF07690 Major Facilitator Superfamily C6M09_00405 PF00440 Bacterial regulatory proteins, tetR family C6M09_00410 PF00583 Acetyltransferase (GNAT) family C6M09_00425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_00425 PF00529 HlyD membrane-fusion protein of T1SS C6M09_00435 PF13610 DDE domain C6M09_00450 PF00293 NUDIX domain C6M09_00455 PF12706 Beta-lactamase superfamily domain C6M09_00460 PF01965 DJ-1/PfpI family C6M09_00465 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_00465 PF00107 Zinc-binding dehydrogenase C6M09_00480 PF00107 Zinc-binding dehydrogenase C6M09_00480 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_00500 PF13802 Galactose mutarotase-like C6M09_00500 PF01055 Glycosyl hydrolases family 31 C6M09_00510 PF11975 Family 4 glycosyl hydrolase C-terminal domain C6M09_00510 PF02056 Family 4 glycosyl hydrolase C6M09_00515 PF00367 phosphotransferase system, EIIB C6M09_00515 PF02378 Phosphotransferase system, EIIC C6M09_00520 PF05170 AsmA family C6M09_00525 PF00860 Permease family C6M09_00530 PF03616 Sodium/glutamate symporter C6M09_00535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_00535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_00540 PF00230 Major intrinsic protein C6M09_00545 PF06005 Cell division protein ZapB C6M09_00555 PF02611 CDP-diacylglycerol pyrophosphatase C6M09_00565 PF00121 Triosephosphate isomerase C6M09_00570 PF07305 Protein of unknown function (DUF1454) C6M09_00575 PF05656 Protein of unknown function (DUF805) C6M09_00580 PF00970 Oxidoreductase FAD-binding domain C6M09_00580 PF00175 Oxidoreductase NAD-binding domain C6M09_00585 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C6M09_00590 PF00271 Helicase conserved C-terminal domain C6M09_00590 PF00270 DEAD/DEAH box helicase C6M09_00590 PF17191 RecG wedge domain C6M09_00595 PF00588 SpoU rRNA Methylase family C6M09_00595 PF12105 SpoU, rRNA methylase, C-terminal C6M09_00600 PF13291 ACT domain C6M09_00600 PF04607 Region found in RelA / SpoT proteins C6M09_00600 PF02824 TGS domain C6M09_00605 PF01192 RNA polymerase Rpb6 C6M09_00610 PF00625 Guanylate kinase C6M09_00615 PF01653 NAD-dependent DNA ligase adenylation domain C6M09_00615 PF03120 NAD-dependent DNA ligase OB-fold domain C6M09_00620 PF03458 UPF0126 domain C6M09_00630 PF12833 Helix-turn-helix domain C6M09_00630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C6M09_00630 PF02805 Metal binding domain of Ada C6M09_00630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C6M09_00640 PF03755 YicC-like family, N-terminal region C6M09_00640 PF08340 Domain of unknown function (DUF1732) C6M09_00645 PF01609 Transposase DDE domain C6M09_00645 PF05598 Transposase domain (DUF772) C6M09_00665 PF00005 ABC transporter C6M09_00675 PF01138 3' exoribonuclease family, domain 1 C6M09_00675 PF03725 3' exoribonuclease family, domain 2 C6M09_00680 PF00156 Phosphoribosyl transferase domain C6M09_00685 PF00440 Bacterial regulatory proteins, tetR family C6M09_00690 PF00692 dUTPase C6M09_00695 PF02441 Flavoprotein C6M09_00695 PF04127 DNA / pantothenate metabolism flavoprotein C6M09_00700 PF04002 RadC-like JAB domain C6M09_00705 PF00830 Ribosomal L28 family C6M09_00710 PF00471 Ribosomal protein L33 C6M09_00715 PF06827 Zinc finger found in FPG and IleRS C6M09_00715 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C6M09_00715 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C6M09_00720 PF01467 Cytidylyltransferase-like C6M09_00725 PF00535 Glycosyl transferase family 2 C6M09_00730 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C6M09_00735 PF00535 Glycosyl transferase family 2 C6M09_00740 PF00534 Glycosyl transferases group 1 C6M09_00740 PF13439 Glycosyltransferase Family 4 C6M09_00745 PF13439 Glycosyltransferase Family 4 C6M09_00745 PF00534 Glycosyl transferases group 1 C6M09_00750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C6M09_00765 PF04932 O-Antigen ligase C6M09_00775 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C6M09_00780 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C6M09_00785 PF01370 NAD dependent epimerase/dehydratase family C6M09_00790 PF00155 Aminotransferase class I and II C6M09_00795 PF00107 Zinc-binding dehydrogenase C6M09_00795 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_00800 PF00535 Glycosyl transferase family 2 C6M09_00805 PF04748 Divergent polysaccharide deacetylase C6M09_00810 PF01551 Peptidase family M23 C6M09_00815 PF01676 Metalloenzyme superfamily C6M09_00815 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C6M09_00820 PF00581 Rhodanese-like domain C6M09_00825 PF00462 Glutaredoxin C6M09_00830 PF02556 Preprotein translocase subunit SecB C6M09_00835 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C6M09_00835 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C6M09_00840 PF06426 Serine acetyltransferase, N-terminal C6M09_00840 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_00845 PF00588 SpoU rRNA Methylase family C6M09_00850 PF01070 FMN-dependent dehydrogenase C6M09_00855 PF00392 Bacterial regulatory proteins, gntR family C6M09_00855 PF07729 FCD domain C6M09_00860 PF02652 L-lactate permease C6M09_00865 PF10928 Protein of unknown function (DUF2810) C6M09_00875 PF05068 Mannitol repressor C6M09_00880 PF01232 Mannitol dehydrogenase Rossmann domain C6M09_00880 PF08125 Mannitol dehydrogenase C-terminal domain C6M09_00885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_00885 PF02378 Phosphotransferase system, EIIC C6M09_00885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_00890 PF11742 Protein of unknown function (DUF3302) C6M09_00895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_00895 PF00529 HlyD membrane-fusion protein of T1SS C6M09_00900 PF13417 Glutathione S-transferase, N-terminal domain C6M09_00900 PF00043 Glutathione S-transferase, C-terminal domain C6M09_00905 PF03841 L-seryl-tRNA selenium transferase C6M09_00905 PF12390 Selenocysteine synthase N terminal C6M09_00910 PF09107 Elongation factor SelB, winged helix C6M09_00910 PF09106 Elongation factor SelB, winged helix C6M09_00910 PF03144 Elongation factor Tu domain 2 C6M09_00910 PF00009 Elongation factor Tu GTP binding domain C6M09_00915 PF01614 Bacterial transcriptional regulator C6M09_00915 PF09339 IclR helix-turn-helix domain C6M09_00920 PF12800 4Fe-4S binding domain C6M09_00920 PF13247 4Fe-4S dicluster domain C6M09_00925 PF00155 Aminotransferase class I and II C6M09_00930 PF00128 Alpha amylase, catalytic domain C6M09_00935 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C6M09_00940 PF12833 Helix-turn-helix domain C6M09_00945 PF02653 Branched-chain amino acid transport system / permease component C6M09_00950 PF00005 ABC transporter C6M09_00955 PF13407 Periplasmic binding protein domain C6M09_00965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_00965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_00970 PF05360 yiaA/B two helix domain C6M09_00975 PF05360 yiaA/B two helix domain C6M09_00980 PF01757 Acyltransferase family C6M09_00985 PF13983 YsaB-like lipoprotein C6M09_00990 PF02091 Glycyl-tRNA synthetase alpha subunit C6M09_00995 PF05746 DALR anticodon binding domain C6M09_00995 PF02092 Glycyl-tRNA synthetase beta subunit C6M09_01005 PF01848 Hok/gef family C6M09_01010 PF00005 ABC transporter C6M09_01010 PF12848 ABC transporter C6M09_01015 PF00313 'Cold-shock' DNA-binding domain C6M09_01020 PF01381 Helix-turn-helix C6M09_01025 PF07690 Major Facilitator Superfamily C6M09_01030 PF11254 Protein of unknown function (DUF3053) C6M09_01035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6M09_01035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_01040 PF07690 Major Facilitator Superfamily C6M09_01045 PF00294 pfkB family carbohydrate kinase C6M09_01055 PF00356 Bacterial regulatory proteins, lacI family C6M09_01060 PF00691 OmpA family C6M09_01060 PF13488 Glycine zipper C6M09_01065 PF00384 Molybdopterin oxidoreductase C6M09_01065 PF18364 Molybdopterin oxidoreductase N-terminal domain C6M09_01065 PF01568 Molydopterin dinucleotide binding domain C6M09_01070 PF00583 Acetyltransferase (GNAT) family C6M09_01075 PF03352 Methyladenine glycosylase C6M09_01080 PF03797 Autotransporter beta-domain C6M09_01085 PF07690 Major Facilitator Superfamily C6M09_01090 PF08019 Phosphoethanolamine transferase EptA/EptB C6M09_01090 PF00884 Sulfatase C6M09_01115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_01120 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_01125 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_01125 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_01130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_01130 PF00005 ABC transporter C6M09_01135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_01135 PF00005 ABC transporter C6M09_01155 PF00535 Glycosyl transferase family 2 C6M09_01155 PF07238 PilZ domain C6M09_01155 PF03552 Cellulose synthase C6M09_01155 PF03170 Bacterial cellulose synthase subunit C6M09_01160 PF03170 Bacterial cellulose synthase subunit C6M09_01165 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) C6M09_01175 PF01270 Glycosyl hydrolases family 8 C6M09_01180 PF11658 Cellulose biosynthesis protein BcsG C6M09_01185 PF11120 Cellulose biosynthesis protein BcsF C6M09_01190 PF10995 Cellulose biosynthesis GIL C6M09_01195 PF10945 Cellulose biosynthesis protein BcsR C6M09_01200 PF06564 Cellulose biosynthesis protein BcsQ C6M09_01205 PF07238 PilZ domain C6M09_01205 PF00535 Glycosyl transferase family 2 C6M09_01210 PF03170 Bacterial cellulose synthase subunit C6M09_01215 PF01270 Glycosyl hydrolases family 8 C6M09_01220 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) C6M09_01225 PF00563 EAL domain C6M09_01225 PF00672 HAMP domain C6M09_01225 PF00990 Diguanylate cyclase, GGDEF domain C6M09_01225 PF17154 Gammaproteobacterial periplasmic sensor domain C6M09_01230 PF00375 Sodium:dicarboxylate symporter family C6M09_01235 PF05193 Peptidase M16 inactive domain C6M09_01235 PF00675 Insulinase (Peptidase family M16) C6M09_01240 PF00294 pfkB family carbohydrate kinase C6M09_01245 PF05170 AsmA family C6M09_01250 PF07690 Major Facilitator Superfamily C6M09_01250 PF00083 Sugar (and other) transporter C6M09_01255 PF03631 Virulence factor BrkB C6M09_01260 PF03466 LysR substrate binding domain C6M09_01260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_01270 PF13302 Acetyltransferase (GNAT) domain C6M09_01275 PF01204 Trehalase C6M09_01280 PF00465 Iron-containing alcohol dehydrogenase C6M09_01290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6M09_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_01295 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C6M09_01300 PF01569 PAP2 superfamily C6M09_01305 PF01432 Peptidase family M3 C6M09_01310 PF04445 Putative SAM-dependent methyltransferase C6M09_01315 PF00854 POT family C6M09_01320 PF00582 Universal stress protein family C6M09_01325 PF10625 Universal stress protein B (UspB) C6M09_01330 PF01384 Phosphate transporter family C6M09_01340 PF03448 MgtE intracellular N domain C6M09_01340 PF01769 Divalent cation transporter C6M09_01340 PF00571 CBS domain C6M09_01345 PF01402 Ribbon-helix-helix protein, copG family C6M09_01345 PF08753 NikR C terminal nickel binding domain C6M09_01350 PF00005 ABC transporter C6M09_01355 PF00005 ABC transporter C6M09_01360 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_01365 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_01370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_01375 PF03466 LysR substrate binding domain C6M09_01380 PF05870 Phenolic acid decarboxylase (PAD) C6M09_01385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C6M09_01390 PF00535 Glycosyl transferase family 2 C6M09_01395 PF01370 NAD dependent epimerase/dehydratase family C6M09_01395 PF00551 Formyl transferase C6M09_01395 PF02911 Formyl transferase, C-terminal domain C6M09_01400 PF01522 Polysaccharide deacetylase C6M09_01405 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C6M09_01410 PF00892 EamA-like transporter family C6M09_01420 PF01594 AI-2E family transporter C6M09_01425 PF07690 Major Facilitator Superfamily C6M09_01430 PF08786 DcrB C6M09_01435 PF02592 Putative vitamin uptake transporter C6M09_01440 PF01206 Sulfurtransferase TusA C6M09_01445 PF00403 Heavy-metal-associated domain C6M09_01450 PF07947 YhhN family C6M09_01455 PF10694 Protein of unknown function (DUF2500) C6M09_01460 PF06611 Protein of unknown function (DUF1145) C6M09_01470 PF02881 SRP54-type protein, helical bundle domain C6M09_01470 PF00448 SRP54-type protein, GTPase domain C6M09_01475 PF00005 ABC transporter C6M09_01480 PF02687 FtsX-like permease family C6M09_01480 PF18075 FtsX extracellular domain C6M09_01485 PF04542 Sigma-70 region 2 C6M09_01485 PF04545 Sigma-70, region 4 C6M09_01490 PF00155 Aminotransferase class I and II C6M09_01490 PF00392 Bacterial regulatory proteins, gntR family C6M09_01495 PF00202 Aminotransferase class-III C6M09_01505 PF13458 Periplasmic binding protein C6M09_01510 PF12568 Acetyltransferase (GNAT) domain, PanZ C6M09_01515 PF13458 Periplasmic binding protein C6M09_01520 PF02653 Branched-chain amino acid transport system / permease component C6M09_01525 PF02653 Branched-chain amino acid transport system / permease component C6M09_01525 PF11862 Domain of unknown function (DUF3382) C6M09_01530 PF00005 ABC transporter C6M09_01530 PF12399 Branched-chain amino acid ATP-binding cassette transporter C6M09_01535 PF00005 ABC transporter C6M09_01540 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C6M09_01550 PF13416 Bacterial extracellular solute-binding protein C6M09_01555 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_01560 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_01565 PF17912 MalK OB fold domain C6M09_01565 PF00005 ABC transporter C6M09_01570 PF03009 Glycerophosphoryl diester phosphodiesterase family C6M09_01575 PF10956 Protein of unknown function (DUF2756) C6M09_01585 PF00583 Acetyltransferase (GNAT) family C6M09_01595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_01595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_01600 PF02678 Pirin C6M09_01600 PF17954 Quercetinase C-terminal cupin domain C6M09_01605 PF00356 Bacterial regulatory proteins, lacI family C6M09_01605 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C6M09_01610 PF01202 Shikimate kinase C6M09_01615 PF02447 GntP family permease C6M09_01625 PF01118 Semialdehyde dehydrogenase, NAD binding domain C6M09_01625 PF02774 Semialdehyde dehydrogenase, dimerisation domain C6M09_01630 PF00128 Alpha amylase, catalytic domain C6M09_01630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C6M09_01630 PF02806 Alpha amylase, C-terminal all-beta domain C6M09_01635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C6M09_01635 PF18390 Glycogen debranching enzyme C-terminal domain C6M09_01635 PF00128 Alpha amylase, catalytic domain C6M09_01640 PF00483 Nucleotidyl transferase C6M09_01645 PF08323 Starch synthase catalytic domain C6M09_01645 PF00534 Glycosyl transferases group 1 C6M09_01650 PF00343 Carbohydrate phosphorylase C6M09_01665 PF01266 FAD dependent oxidoreductase C6M09_01665 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C6M09_01670 PF00581 Rhodanese-like domain C6M09_01675 PF01694 Rhomboid family C6M09_01675 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C6M09_01680 PF08220 DeoR-like helix-turn-helix domain C6M09_01680 PF00455 DeoR C terminal sensor domain C6M09_01685 PF00196 Bacterial regulatory proteins, luxR family C6M09_01685 PF17874 MalT-like TPR region C6M09_01690 PF00343 Carbohydrate phosphorylase C6M09_01695 PF02446 4-alpha-glucanotransferase C6M09_01700 PF02447 GntP family permease C6M09_01705 PF01521 Iron-sulphur cluster biosynthesis C6M09_01705 PF01106 NifU-like domain C6M09_01710 PF00156 Phosphoribosyl transferase domain C6M09_01715 PF00561 alpha/beta hydrolase fold C6M09_01725 PF09012 FeoC like transcriptional regulator C6M09_01730 PF07664 Ferrous iron transport protein B C terminus C6M09_01730 PF07670 Nucleoside recognition C6M09_01730 PF02421 Ferrous iron transport protein B C6M09_01730 PF17910 FeoB cytosolic helical domain C6M09_01735 PF04023 FeoA domain C6M09_01740 PF17674 HHH domain C6M09_01740 PF00575 S1 RNA binding domain C6M09_01740 PF09371 Tex-like protein N-terminal domain C6M09_01740 PF16921 Tex protein YqgF-like domain C6M09_01745 PF01272 Transcription elongation factor, GreA/GreB, C-term C6M09_01745 PF03449 Transcription elongation factor, N-terminal C6M09_01750 PF00486 Transcriptional regulatory protein, C terminal C6M09_01750 PF00072 Response regulator receiver domain C6M09_01755 PF00512 His Kinase A (phospho-acceptor) domain C6M09_01755 PF00672 HAMP domain C6M09_01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_01760 PF01293 Phosphoenolpyruvate carboxykinase C6M09_01765 PF01430 Hsp33 protein C6M09_01770 PF01479 S4 domain C6M09_01775 PF13419 Haloacid dehalogenase-like hydrolase C6M09_01780 PF07095 Intracellular growth attenuator protein IgaA C6M09_01785 PF00293 NUDIX domain C6M09_01790 PF17092 Penicillin-binding protein OB-like domain C6M09_01790 PF00912 Transglycosylase C6M09_01790 PF00905 Penicillin binding protein transpeptidase domain C6M09_01815 PF00263 Bacterial type II and III secretion system protein C6M09_01815 PF03958 Bacterial type II/III secretion system short domain C6M09_01820 PF01202 Shikimate kinase C6M09_01825 PF01761 3-dehydroquinate synthase C6M09_01830 PF05036 Sporulation related domain C6M09_01835 PF02086 D12 class N6 adenine-specific DNA methyltransferase C6M09_01840 PF00834 Ribulose-phosphate 3 epimerase family C6M09_01845 PF13419 Haloacid dehalogenase-like hydrolase C6M09_01850 PF00579 tRNA synthetases class I (W and Y) C6M09_01855 PF14824 Sirohaem biosynthesis protein central C6M09_01855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6M09_01855 PF10414 Sirohaem synthase dimerisation region C6M09_01860 PF13806 Rieske-like [2Fe-2S] domain C6M09_01865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C6M09_01865 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_01865 PF18267 Rubredoxin NAD+ reductase C-terminal domain C6M09_01865 PF04324 BFD-like [2Fe-2S] binding domain C6M09_01865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C6M09_01870 PF07969 Amidohydrolase family C6M09_01875 PF07690 Major Facilitator Superfamily C6M09_01880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C6M09_01885 PF10832 Protein of unknown function (DUF2559) C6M09_01890 PF02661 Fic/DOC family C6M09_01895 PF00117 Glutamine amidotransferase class-I C6M09_01900 PF00202 Aminotransferase class-III C6M09_01905 PF12805 FUSC-like inner membrane protein yccS C6M09_01910 PF13545 Crp-like helix-turn-helix domain C6M09_01910 PF00027 Cyclic nucleotide-binding domain C6M09_01915 PF02566 OsmC-like protein C6M09_01920 PF00485 Phosphoribulokinase / Uridine kinase family C6M09_01925 PF06794 Uncharacterised protein family (UPF0270) C6M09_01930 PF00561 alpha/beta hydrolase fold C6M09_01935 PF12848 ABC transporter C6M09_01935 PF00005 ABC transporter C6M09_01940 PF02525 Flavodoxin-like fold C6M09_01945 PF02254 TrkA-N domain C6M09_01945 PF00999 Sodium/hydrogen exchanger family C6M09_01950 PF09526 Probable metal-binding protein (DUF2387) C6M09_01955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C6M09_01960 PF04102 SlyX C6M09_01965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C6M09_01965 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C6M09_01970 PF13309 HTH domain C6M09_01970 PF08348 YheO-like PAS domain C6M09_01975 PF02635 DsrE/DsrF-like family C6M09_01980 PF02635 DsrE/DsrF-like family C6M09_01985 PF04077 DsrH like protein C6M09_01990 PF00164 Ribosomal protein S12/S23 C6M09_01995 PF00177 Ribosomal protein S7p/S5e C6M09_02000 PF00009 Elongation factor Tu GTP binding domain C6M09_02000 PF03764 Elongation factor G, domain IV C6M09_02000 PF14492 Elongation Factor G, domain II C6M09_02000 PF00679 Elongation factor G C-terminus C6M09_02000 PF03144 Elongation factor Tu domain 2 C6M09_02005 PF00009 Elongation factor Tu GTP binding domain C6M09_02005 PF03144 Elongation factor Tu domain 2 C6M09_02005 PF03143 Elongation factor Tu C-terminal domain C6M09_02010 PF04324 BFD-like [2Fe-2S] binding domain C6M09_02015 PF00210 Ferritin-like domain C6M09_02020 PF01478 Type IV leader peptidase family C6M09_02025 PF00338 Ribosomal protein S10p/S20e C6M09_02030 PF00297 Ribosomal protein L3 C6M09_02035 PF00573 Ribosomal protein L4/L1 family C6M09_02040 PF00276 Ribosomal protein L23 C6M09_02045 PF00181 Ribosomal Proteins L2, RNA binding domain C6M09_02045 PF03947 Ribosomal Proteins L2, C-terminal domain C6M09_02050 PF00203 Ribosomal protein S19 C6M09_02055 PF00237 Ribosomal protein L22p/L17e C6M09_02060 PF00189 Ribosomal protein S3, C-terminal domain C6M09_02060 PF07650 KH domain C6M09_02065 PF00252 Ribosomal protein L16p/L10e C6M09_02070 PF00831 Ribosomal L29 protein C6M09_02075 PF00366 Ribosomal protein S17 C6M09_02080 PF00238 Ribosomal protein L14p/L23e C6M09_02085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C6M09_02085 PF00467 KOW motif C6M09_02090 PF00673 ribosomal L5P family C-terminus C6M09_02090 PF00281 Ribosomal protein L5 C6M09_02095 PF00253 Ribosomal protein S14p/S29e C6M09_02100 PF00410 Ribosomal protein S8 C6M09_02105 PF00347 Ribosomal protein L6 C6M09_02110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C6M09_02115 PF00333 Ribosomal protein S5, N-terminal domain C6M09_02115 PF03719 Ribosomal protein S5, C-terminal domain C6M09_02120 PF00327 Ribosomal protein L30p/L7e C6M09_02125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C6M09_02130 PF00344 SecY translocase C6M09_02135 PF00444 Ribosomal protein L36 C6M09_02140 PF00416 Ribosomal protein S13/S18 C6M09_02145 PF00411 Ribosomal protein S11 C6M09_02150 PF00163 Ribosomal protein S4/S9 N-terminal domain C6M09_02150 PF01479 S4 domain C6M09_02155 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C6M09_02155 PF01000 RNA polymerase Rpb3/RpoA insert domain C6M09_02155 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C6M09_02160 PF01196 Ribosomal protein L17 C6M09_02165 PF09350 Domain of unknown function (DUF1992) C6M09_02170 PF13411 MerR HTH family regulatory protein C6M09_02175 PF03889 Alternative ribosome-rescue factor A C6M09_02180 PF01741 Large-conductance mechanosensitive channel, MscL C6M09_02185 PF02080 TrkA-C domain C6M09_02185 PF02254 TrkA-N domain C6M09_02190 PF01029 NusB family C6M09_02190 PF01189 16S rRNA methyltransferase RsmB/F C6M09_02195 PF00551 Formyl transferase C6M09_02195 PF02911 Formyl transferase, C-terminal domain C6M09_02200 PF01327 Polypeptide deformylase C6M09_02205 PF02481 DNA recombination-mediator protein A C6M09_02205 PF17782 DprA winged helix domain C6M09_02210 PF04361 Protein of unknown function (DUF494) C6M09_02215 PF01396 Topoisomerase DNA binding C4 zinc finger C6M09_02220 PF01300 Telomere recombination C6M09_02225 PF08501 Shikimate dehydrogenase substrate binding domain C6M09_02225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C6M09_02225 PF01488 Shikimate / quinate 5-dehydrogenase C6M09_02230 PF07369 Protein of unknown function (DUF1488) C6M09_02235 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_02270 PF00873 AcrB/AcrD/AcrF family C6M09_02275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_02275 PF00529 HlyD membrane-fusion protein of T1SS C6M09_02280 PF00440 Bacterial regulatory proteins, tetR family C6M09_02280 PF08361 MAATS-type transcriptional repressor, C-terminal region C6M09_02285 PF00589 Phage integrase family C6M09_02285 PF14659 Phage integrase, N-terminal SAM-like domain C6M09_02285 PF13356 Arm DNA-binding domain C6M09_02300 PF08346 AntA/AntB antirepressor C6M09_02300 PF10548 P22AR C-terminal domain C6M09_02385 PF03354 Phage Terminase C6M09_02395 PF02954 Bacterial regulatory protein, Fis family C6M09_02400 PF01207 Dihydrouridine synthase (Dus) C6M09_02410 PF00474 Sodium:solute symporter family C6M09_02415 PF06196 Protein of unknown function (DUF997) C6M09_02420 PF02785 Biotin carboxylase C-terminal domain C6M09_02420 PF00289 Biotin carboxylase, N-terminal domain C6M09_02420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C6M09_02425 PF00364 Biotin-requiring enzyme C6M09_02430 PF01220 Dehydroquinase class II C6M09_02435 PF01794 Ferric reductase like transmembrane component C6M09_02440 PF00174 Oxidoreductase molybdopterin binding domain C6M09_02450 PF17157 Gammaproteobacterial periplasmic sensor domain C6M09_02450 PF00990 Diguanylate cyclase, GGDEF domain C6M09_02450 PF00563 EAL domain C6M09_02460 PF04085 rod shape-determining protein MreC C6M09_02465 PF04093 rod shape-determining protein MreD C6M09_02470 PF02545 Maf-like protein C6M09_02475 PF10150 Ribonuclease E/G family C6M09_02475 PF00575 S1 RNA binding domain C6M09_02480 PF13116 Protein of unknown function C6M09_02480 PF13502 AsmA-like C-terminal region C6M09_02485 PF01523 Putative modulator of DNA gyrase C6M09_02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_02490 PF03466 LysR substrate binding domain C6M09_02495 PF07869 Protein of unknown function (DUF1656) C6M09_02500 PF13533 Biotin-lipoyl like C6M09_02505 PF04632 Fusaric acid resistance protein family C6M09_02510 PF01337 Barstar (barnase inhibitor) C6M09_02515 PF07338 Protein of unknown function (DUF1471) C6M09_02520 PF07338 Protein of unknown function (DUF1471) C6M09_02525 PF02863 Arginine repressor, C-terminal domain C6M09_02525 PF01316 Arginine repressor, DNA binding domain C6M09_02530 PF00056 lactate/malate dehydrogenase, NAD binding domain C6M09_02530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C6M09_02535 PF13180 PDZ domain C6M09_02540 PF00595 PDZ domain C6M09_02540 PF13180 PDZ domain C6M09_02545 PF06295 Protein of unknown function (DUF1043) C6M09_02550 PF03969 AFG1-like ATPase C6M09_02555 PF00572 Ribosomal protein L13 C6M09_02560 PF00380 Ribosomal protein S9/S16 C6M09_02570 PF00043 Glutathione S-transferase, C-terminal domain C6M09_02570 PF02798 Glutathione S-transferase, N-terminal domain C6M09_02575 PF04386 Stringent starvation protein B C6M09_02580 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase C6M09_02585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C6M09_02585 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_02590 PF04898 Glutamate synthase central domain C6M09_02590 PF01645 Conserved region in glutamate synthase C6M09_02590 PF00310 Glutamine amidotransferases class-II C6M09_02590 PF01493 GXGXG motif C6M09_02595 PF04055 Radical SAM superfamily C6M09_02595 PF16199 Radical_SAM C-terminal domain C6M09_02600 PF07690 Major Facilitator Superfamily C6M09_02605 PF00107 Zinc-binding dehydrogenase C6M09_02605 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_02610 PF03786 D-mannonate dehydratase (UxuA) C6M09_02615 PF01627 Hpt domain C6M09_02615 PF18415 Histidine kinase receptor ArcB trans-membrane domain C6M09_02615 PF00989 PAS fold C6M09_02615 PF00512 His Kinase A (phospho-acceptor) domain C6M09_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_02615 PF00072 Response regulator receiver domain C6M09_02625 PF00912 Transglycosylase C6M09_02630 PF00381 PTS HPr component phosphorylation site C6M09_02635 PF03668 P-loop ATPase protein family C6M09_02640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_02645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C6M09_02650 PF04552 Sigma-54, DNA binding domain C6M09_02650 PF04963 Sigma-54 factor, core binding domain C6M09_02650 PF00309 Sigma-54 factor, Activator interacting domain (AID) C6M09_02655 PF12399 Branched-chain amino acid ATP-binding cassette transporter C6M09_02655 PF00005 ABC transporter C6M09_02660 PF03968 OstA-like protein C6M09_02665 PF06835 Lipopolysaccharide-assembly, LptC-related C6M09_02675 PF01380 SIS domain C6M09_02675 PF00571 CBS domain C6M09_02680 PF01699 Sodium/calcium exchanger protein C6M09_02685 PF00005 ABC transporter C6M09_02690 PF02405 Permease MlaE C6M09_02695 PF02470 MlaD protein C6M09_02700 PF05494 MlaC protein C6M09_02705 PF13466 STAS domain C6M09_02710 PF01722 BolA-like protein C6M09_02715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C6M09_02720 PF13693 Winged helix-turn-helix DNA-binding C6M09_02725 PF00348 Polyprenyl synthetase C6M09_02730 PF00829 Ribosomal prokaryotic L21 protein C6M09_02735 PF01016 Ribosomal L27 protein C6M09_02740 PF00892 EamA-like transporter family C6M09_02745 PF01926 50S ribosome-binding GTPase C6M09_02745 PF01018 GTP1/OBG C6M09_02750 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C6M09_02755 PF01272 Transcription elongation factor, GreA/GreB, C-term C6M09_02755 PF03449 Transcription elongation factor, N-terminal C6M09_02760 PF01985 CRS1 / YhbY (CRM) domain C6M09_02765 PF01728 FtsJ-like methyltransferase C6M09_02770 PF06480 FtsH Extracellular C6M09_02770 PF01434 Peptidase family M41 C6M09_02770 PF17862 AAA+ lid domain C6M09_02770 PF00004 ATPase family associated with various cellular activities (AAA) C6M09_02775 PF00809 Pterin binding enzyme C6M09_02780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C6M09_02780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C6M09_02780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C6M09_02780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C6M09_02785 PF03840 Preprotein translocase SecG subunit C6M09_02800 PF07437 YfaZ precursor C6M09_02805 PF15977 Winged helix-turn-helix DNA binding C6M09_02810 PF00764 Arginosuccinate synthase C6M09_02820 PF17384 RimP C-terminal SH3 domain C6M09_02820 PF02576 RimP N-terminal domain C6M09_02825 PF08529 NusA N-terminal domain C6M09_02825 PF00575 S1 RNA binding domain C6M09_02825 PF13184 NusA-like KH domain C6M09_02830 PF04760 Translation initiation factor IF-2, N-terminal region C6M09_02830 PF11987 Translation-initiation factor 2 C6M09_02830 PF08364 Bacterial translation initiation factor IF-2 associated region C6M09_02830 PF00009 Elongation factor Tu GTP binding domain C6M09_02835 PF02033 Ribosome-binding factor A C6M09_02840 PF09157 Pseudouridine synthase II TruB, C-terminal C6M09_02840 PF01509 TruB family pseudouridylate synthase (N terminal domain) C6M09_02840 PF16198 tRNA pseudouridylate synthase B C-terminal domain C6M09_02845 PF00312 Ribosomal protein S15 C6M09_02850 PF00013 KH domain C6M09_02850 PF00575 S1 RNA binding domain C6M09_02850 PF03725 3' exoribonuclease family, domain 2 C6M09_02850 PF01138 3' exoribonuclease family, domain 1 C6M09_02850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C6M09_02855 PF07719 Tetratricopeptide repeat C6M09_02855 PF13181 Tetratricopeptide repeat C6M09_02865 PF03880 DbpA RNA binding domain C6M09_02865 PF00270 DEAD/DEAH box helicase C6M09_02865 PF12343 Cold shock protein DEAD box A C6M09_02865 PF00271 Helicase conserved C-terminal domain C6M09_02870 PF03222 Tryptophan/tyrosine permease family C6M09_02875 PF00296 Luciferase-like monooxygenase C6M09_02880 PF01136 Peptidase family U32 C6M09_02885 PF01136 Peptidase family U32 C6M09_02890 PF02036 SCP-2 sterol transfer family C6M09_02895 PF13508 Acetyltransferase (GNAT) domain C6M09_02900 PF01541 GIY-YIG catalytic domain C6M09_02910 PF01965 DJ-1/PfpI family C6M09_02915 PF13460 NAD(P)H-binding C6M09_02920 PF03773 Predicted permease C6M09_02925 PF04972 BON domain C6M09_02930 PF13580 SIS domain C6M09_02935 PF02021 Uncharacterised protein family UPF0102 C6M09_02940 PF04348 LppC putative lipoprotein C6M09_02945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6M09_02950 PF13784 Fic/DOC family N-terminal C6M09_02950 PF02661 Fic/DOC family C6M09_02955 PF08220 DeoR-like helix-turn-helix domain C6M09_02960 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_02960 PF00107 Zinc-binding dehydrogenase C6M09_02965 PF03611 PTS system sugar-specific permease component C6M09_02970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_02975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_02980 PF08013 Tagatose 6 phosphate kinase C6M09_02985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_02985 PF00381 PTS HPr component phosphorylation site C6M09_02990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_02990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_02995 PF00294 pfkB family carbohydrate kinase C6M09_03000 PF01116 Fructose-bisphosphate aldolase class-II C6M09_03005 PF00455 DeoR C terminal sensor domain C6M09_03005 PF08220 DeoR-like helix-turn-helix domain C6M09_03010 PF00294 pfkB family carbohydrate kinase C6M09_03015 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C6M09_03015 PF08666 SAF domain C6M09_03020 PF07690 Major Facilitator Superfamily C6M09_03025 PF03328 HpcH/HpaI aldolase/citrate lyase family C6M09_03030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C6M09_03030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C6M09_03035 PF02595 Glycerate kinase family C6M09_03060 PF02678 Pirin C6M09_03060 PF17954 Quercetinase C-terminal cupin domain C6M09_03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_03065 PF03466 LysR substrate binding domain C6M09_03070 PF05656 Protein of unknown function (DUF805) C6M09_03075 PF13409 Glutathione S-transferase, N-terminal domain C6M09_03080 PF07681 DoxX C6M09_03085 PF13997 YqjK-like protein C6M09_03090 PF07332 Putative Actinobacterial Holin-X, holin superfamily III C6M09_03095 PF05957 Bacterial protein of unknown function (DUF883) C6M09_03100 PF06476 Protein of unknown function (DUF1090) C6M09_03105 PF13721 SecD export protein N-terminal TM region C6M09_03110 PF09335 SNARE associated Golgi protein C6M09_03115 PF00392 Bacterial regulatory proteins, gntR family C6M09_03115 PF07729 FCD domain C6M09_03120 PF07690 Major Facilitator Superfamily C6M09_03125 PF02614 Glucuronate isomerase C6M09_03130 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C6M09_03130 PF08666 SAF domain C6M09_03135 PF10688 Bacterial inner membrane protein C6M09_03140 PF00375 Sodium:dicarboxylate symporter family C6M09_03145 PF03741 Integral membrane protein TerC family C6M09_03150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_03155 PF01863 Protein of unknown function DUF45 C6M09_03170 PF05175 Methyltransferase small domain C6M09_03175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C6M09_03175 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_03180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_03180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_03185 PF04198 Putative sugar-binding domain C6M09_03190 PF00005 ABC transporter C6M09_03195 PF02653 Branched-chain amino acid transport system / permease component C6M09_03200 PF02653 Branched-chain amino acid transport system / permease component C6M09_03205 PF13407 Periplasmic binding protein domain C6M09_03210 PF01791 DeoC/LacD family aldolase C6M09_03215 PF03992 Antibiotic biosynthesis monooxygenase C6M09_03220 PF00202 Aminotransferase class-III C6M09_03225 PF03551 Transcriptional regulator PadR-like family C6M09_03230 PF08021 Siderophore-interacting FAD-binding domain C6M09_03230 PF04954 Siderophore-interacting protein C6M09_03235 PF02734 DAK2 domain C6M09_03235 PF02733 Dak1 domain C6M09_03240 PF00381 PTS HPr component phosphorylation site C6M09_03240 PF03610 PTS system fructose IIA component C6M09_03240 PF00391 PEP-utilising enzyme, mobile domain C6M09_03240 PF05524 PEP-utilising enzyme, N-terminal C6M09_03245 PF02734 DAK2 domain C6M09_03250 PF02733 Dak1 domain C6M09_03260 PF00465 Iron-containing alcohol dehydrogenase C6M09_03265 PF00989 PAS fold C6M09_03265 PF00158 Sigma-54 interaction domain C6M09_03265 PF02954 Bacterial regulatory protein, Fis family C6M09_03270 PF01923 Cobalamin adenosyltransferase C6M09_03275 PF02288 Dehydratase medium subunit C6M09_03280 PF00465 Iron-containing alcohol dehydrogenase C6M09_03285 PF03928 Haem-degrading C6M09_03290 PF02286 Dehydratase large subunit C6M09_03295 PF02288 Dehydratase medium subunit C6M09_03300 PF02287 Dehydratase small subunit C6M09_03305 PF18427 DD-reactivating factor swiveling domain C6M09_03305 PF08841 Diol dehydratase reactivase ATPase-like domain C6M09_03310 PF00230 Major intrinsic protein C6M09_03315 PF06411 HdeA/HdeB family C6M09_03320 PF03729 Short repeat of unknown function (DUF308) C6M09_03325 PF10938 YfdX protein C6M09_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_03330 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_03330 PF00512 His Kinase A (phospho-acceptor) domain C6M09_03330 PF00072 Response regulator receiver domain C6M09_03330 PF01627 Hpt domain C6M09_03335 PF00196 Bacterial regulatory proteins, luxR family C6M09_03335 PF00072 Response regulator receiver domain C6M09_03355 PF03167 Uracil DNA glycosylase superfamily C6M09_03360 PF04545 Sigma-70, region 4 C6M09_03360 PF04542 Sigma-70 region 2 C6M09_03360 PF00140 Sigma-70 factor, region 1.2 C6M09_03360 PF04539 Sigma-70 region 3 C6M09_03360 PF03979 Sigma-70 factor, region 1.1 C6M09_03360 PF04546 Sigma-70, non-essential region C6M09_03365 PF10410 DnaB-helicase binding domain of primase C6M09_03365 PF01807 CHC2 zinc finger C6M09_03365 PF08278 DNA primase DnaG DnaB-binding C6M09_03365 PF08275 DNA primase catalytic core, N-terminal domain C6M09_03370 PF01165 Ribosomal protein S21 C6M09_03375 PF00814 Glycoprotease family C6M09_03385 PF02492 CobW/HypB/UreG, nucleotide-binding domain C6M09_03390 PF01730 UreF C6M09_03395 PF02814 UreE urease accessory protein, N-terminal domain C6M09_03395 PF05194 UreE urease accessory protein, C-terminal domain C6M09_03400 PF01548 Transposase C6M09_03400 PF02371 Transposase IS116/IS110/IS902 family C6M09_03410 PF00699 Urease beta subunit C6M09_03415 PF00547 Urease, gamma subunit C6M09_03420 PF01774 UreD urease accessory protein C6M09_03435 PF02660 Glycerol-3-phosphate acyltransferase C6M09_03440 PF02152 Dihydroneopterin aldolase C6M09_03445 PF02673 Bacitracin resistance protein BacA C6M09_03450 PF01966 HD domain C6M09_03450 PF01743 Poly A polymerase head domain C6M09_03450 PF12627 Probable RNA and SrmB- binding site of polymerase A C6M09_03455 PF08239 Bacterial SH3 domain C6M09_03460 PF01928 CYTH domain C6M09_03465 PF03710 Glutamate-ammonia ligase adenylyltransferase C6M09_03465 PF08335 GlnD PII-uridylyltransferase C6M09_03470 PF00294 pfkB family carbohydrate kinase C6M09_03470 PF01467 Cytidylyltransferase-like C6M09_03480 PF08971 Glycogen synthesis protein C6M09_03485 PF04380 Membrane fusogenic activity C6M09_03490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C6M09_03495 PF02535 ZIP Zinc transporter C6M09_03500 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C6M09_03505 PF03738 Glutathionylspermidine synthase preATP-grasp C6M09_03510 PF06693 Protein of unknown function (DUF1190) C6M09_03515 PF02321 Outer membrane efflux protein C6M09_03520 PF00293 NUDIX domain C6M09_03525 PF06853 Protein of unknown function (DUF1249) C6M09_03530 PF00149 Calcineurin-like phosphoesterase C6M09_03535 PF05728 Uncharacterised protein family (UPF0227) C6M09_03540 PF00204 DNA gyrase B C6M09_03540 PF01751 Toprim domain C6M09_03540 PF00986 DNA gyrase B subunit, carboxyl terminus C6M09_03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_03545 PF03992 Antibiotic biosynthesis monooxygenase C6M09_03550 PF02525 Flavodoxin-like fold C6M09_03555 PF00512 His Kinase A (phospho-acceptor) domain C6M09_03555 PF08521 Two-component sensor kinase N-terminal C6M09_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_03560 PF00072 Response regulator receiver domain C6M09_03560 PF00486 Transcriptional regulatory protein, C terminal C6M09_03565 PF04076 Bacterial OB fold (BOF) protein C6M09_03570 PF06445 GyrI-like small molecule binding domain C6M09_03575 PF03989 DNA gyrase C-terminal domain, beta-propeller C6M09_03575 PF00521 DNA gyrase/topoisomerase IV, subunit A C6M09_03580 PF01553 Acyltransferase C6M09_03585 PF00394 Multicopper oxidase C6M09_03585 PF07732 Multicopper oxidase C6M09_03585 PF07731 Multicopper oxidase C6M09_03590 PF04055 Radical SAM superfamily C6M09_03590 PF08497 Radical SAM N-terminal C6M09_03590 PF11842 Domain of unknown function (DUF3362) C6M09_03600 PF00248 Aldo/keto reductase family C6M09_03605 PF00465 Iron-containing alcohol dehydrogenase C6M09_03610 PF12833 Helix-turn-helix domain C6M09_03610 PF06719 AraC-type transcriptional regulator N-terminus C6M09_03615 PF09335 SNARE associated Golgi protein C6M09_03620 PF01053 Cys/Met metabolism PLP-dependent enzyme C6M09_03625 PF01618 MotA/TolQ/ExbB proton channel family C6M09_03630 PF02472 Biopolymer transport protein ExbD/TolR C6M09_03640 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C6M09_03640 PF04616 Glycosyl hydrolases family 43 C6M09_03645 PF03350 Uncharacterized protein family, UPF0114 C6M09_03650 PF01738 Dienelactone hydrolase family C6M09_03655 PF11115 Protein of unknown function (DUF2623) C6M09_03660 PF02798 Glutathione S-transferase, N-terminal domain C6M09_03675 PF05257 CHAP domain C6M09_03675 PF03738 Glutathionylspermidine synthase preATP-grasp C6M09_03680 PF00155 Aminotransferase class I and II C6M09_03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_03700 PF03466 LysR substrate binding domain C6M09_03705 PF01053 Cys/Met metabolism PLP-dependent enzyme C6M09_03710 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_03710 PF00571 CBS domain C6M09_03735 PF13614 AAA domain C6M09_03745 PF03796 DnaB-like helicase C terminal domain C6M09_03745 PF00772 DnaB-like helicase N terminal domain C6M09_03960 PF13693 Winged helix-turn-helix DNA-binding C6M09_03970 PF00313 'Cold-shock' DNA-binding domain C6M09_03975 PF13693 Winged helix-turn-helix DNA-binding C6M09_03990 PF01609 Transposase DDE domain C6M09_03990 PF05598 Transposase domain (DUF772) C6M09_04015 PF03230 Antirestriction protein C6M09_04030 PF08401 Domain of unknown function (DUF1738) C6M09_04030 PF18818 Metallopeptidase superfamily domain C6M09_04030 PF13362 Toprim domain C6M09_04040 PF00589 Phage integrase family C6M09_04050 PF04474 Protein of unknown function (DUF554) C6M09_04055 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C6M09_04055 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C6M09_04055 PF01276 Orn/Lys/Arg decarboxylase, major domain C6M09_04060 PF03825 Nucleoside H+ symporter C6M09_04065 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C6M09_04065 PF01464 Transglycosylase SLT domain C6M09_04070 PF04362 Bacterial Fe(2+) trafficking C6M09_04075 PF14815 NUDIX domain C6M09_04075 PF00730 HhH-GPD superfamily base excision DNA repair protein C6M09_04075 PF00633 Helix-hairpin-helix motif C6M09_04075 PF10576 Iron-sulfur binding domain of endonuclease III C6M09_04080 PF02390 Putative methyltransferase C6M09_04085 PF04320 Protein with unknown function (DUF469) C6M09_04090 PF11101 Protein of unknown function (DUF2884) C6M09_04095 PF04055 Radical SAM superfamily C6M09_04095 PF06969 HemN C-terminal domain C6M09_04100 PF01725 Ham1 family C6M09_04105 PF02594 Uncharacterised ACR, YggU family COG1872 C6M09_04110 PF02325 YGGT family C6M09_04115 PF01168 Alanine racemase, N-terminal domain C6M09_04120 PF00437 Type II/IV secretion system protein C6M09_04125 PF00196 Bacterial regulatory proteins, luxR family C6M09_04130 PF03652 Holliday junction resolvase C6M09_04135 PF02622 Uncharacterized ACR, COG1678 C6M09_04140 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C6M09_04140 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C6M09_04145 PF04452 RNA methyltransferase C6M09_04150 PF04231 Endonuclease I C6M09_04155 PF17283 SprT-like zinc ribbon domain C6M09_04155 PF10263 SprT-like family C6M09_04160 PF00083 Sugar (and other) transporter C6M09_04165 PF02773 S-adenosylmethionine synthetase, C-terminal domain C6M09_04165 PF02772 S-adenosylmethionine synthetase, central domain C6M09_04165 PF00438 S-adenosylmethionine synthetase, N-terminal domain C6M09_04180 PF17810 Arginine decarboxylase helical bundle domain C6M09_04180 PF17944 Arginine decarboxylase C-terminal helical extension C6M09_04180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C6M09_04185 PF00491 Arginase family C6M09_04195 PF00355 Rieske [2Fe-2S] domain C6M09_04205 PF00355 Rieske [2Fe-2S] domain C6M09_04215 PF09339 IclR helix-turn-helix domain C6M09_04215 PF01614 Bacterial transcriptional regulator C6M09_04225 PF14759 Reductase C-terminal C6M09_04225 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_04240 PF12697 Alpha/beta hydrolase family C6M09_04250 PF03447 Homoserine dehydrogenase, NAD binding domain C6M09_04250 PF01958 Domain of unknown function DUF108 C6M09_04255 PF00171 Aldehyde dehydrogenase family C6M09_04260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_04260 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_04260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_04265 PF03573 outer membrane porin, OprD family C6M09_04270 PF05598 Transposase domain (DUF772) C6M09_04270 PF01609 Transposase DDE domain C6M09_04275 PF01435 Peptidase family M48 C6M09_04280 PF02779 Transketolase, pyrimidine binding domain C6M09_04280 PF02780 Transketolase, C-terminal domain C6M09_04280 PF00456 Transketolase, thiamine diphosphate binding domain C6M09_04285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C6M09_04285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C6M09_04290 PF00162 Phosphoglycerate kinase C6M09_04295 PF01116 Fructose-bisphosphate aldolase class-II C6M09_04300 PF00924 Mechanosensitive ion channel C6M09_04300 PF05552 Conserved TM helix C6M09_04305 PF01810 LysE type translocator C6M09_04310 PF04402 Protein of unknown function (DUF541) C6M09_04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_04315 PF03466 LysR substrate binding domain C6M09_04320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C6M09_04325 PF01842 ACT domain C6M09_04325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6M09_04325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_04330 PF01812 5-formyltetrahydrofolate cyclo-ligase family C6M09_04340 PF05164 Cell division protein ZapA C6M09_04345 PF03695 Uncharacterised protein family (UPF0149) C6M09_04350 PF00557 Metallopeptidase family M24 C6M09_04350 PF05195 Aminopeptidase P, N-terminal domain C6M09_04355 PF01494 FAD binding domain C6M09_04360 PF01494 FAD binding domain C6M09_04365 PF01571 Aminomethyltransferase folate-binding domain C6M09_04365 PF08669 Glycine cleavage T-protein C-terminal barrel domain C6M09_04370 PF01597 Glycine cleavage H-protein C6M09_04375 PF02347 Glycine cleavage system P-protein C6M09_04385 PF00578 AhpC/TSA family C6M09_04405 PF00232 Glycosyl hydrolase family 1 C6M09_04410 PF01380 SIS domain C6M09_04410 PF01418 Helix-turn-helix domain, rpiR family C6M09_04415 PF04266 ASCH domain C6M09_04420 PF03006 Haemolysin-III related C6M09_04425 PF01571 Aminomethyltransferase folate-binding domain C6M09_04430 PF03937 Flavinator of succinate dehydrogenase C6M09_04435 PF07254 Membrane-bound toxin component of toxin-antitoxin system C6M09_04440 PF00258 Flavodoxin C6M09_04445 PF02899 Phage integrase, N-terminal SAM-like domain C6M09_04445 PF00589 Phage integrase family C6M09_04450 PF10411 Disulfide bond isomerase protein N-terminus C6M09_04450 PF13098 Thioredoxin-like domain C6M09_04455 PF01368 DHH family C6M09_04455 PF17768 RecJ OB domain C6M09_04455 PF02272 DHHA1 domain C6M09_04465 PF01336 OB-fold nucleic acid binding domain C6M09_04465 PF00152 tRNA synthetases class II (D, K and N) C6M09_04470 PF00293 NUDIX domain C6M09_04475 PF01476 LysM domain C6M09_04475 PF01551 Peptidase family M23 C6M09_04485 PF07690 Major Facilitator Superfamily C6M09_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_04490 PF03466 LysR substrate binding domain C6M09_04500 PF00248 Aldo/keto reductase family C6M09_04505 PF02525 Flavodoxin-like fold C6M09_04515 PF03466 LysR substrate binding domain C6M09_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_04530 PF01022 Bacterial regulatory protein, arsR family C6M09_04535 PF02040 Arsenical pump membrane protein C6M09_04540 PF03960 ArsC family C6M09_04545 PF00854 POT family C6M09_04550 PF08986 Domain of unknown function (DUF1889) C6M09_04555 PF02321 Outer membrane efflux protein C6M09_04560 PF04632 Fusaric acid resistance protein family C6M09_04565 PF00529 HlyD membrane-fusion protein of T1SS C6M09_04565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_04570 PF17090 Uncharacterised protein family C6M09_04575 PF06902 Divergent 4Fe-4S mono-cluster C6M09_04580 PF14542 GCN5-related N-acetyl-transferase C6M09_04590 PF09160 FimH, mannose binding C6M09_04590 PF00419 Fimbrial protein C6M09_04600 PF00419 Fimbrial protein C6M09_04605 PF00577 Outer membrane usher protein C6M09_04605 PF13954 PapC N-terminal domain C6M09_04605 PF13953 PapC C-terminal domain C6M09_04610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_04610 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_04615 PF00419 Fimbrial protein C6M09_04620 PF00419 Fimbrial protein C6M09_04625 PF00589 Phage integrase family C6M09_04630 PF00589 Phage integrase family C6M09_04635 PF03824 High-affinity nickel-transport protein C6M09_04640 PF01047 MarR family C6M09_04645 PF00892 EamA-like transporter family C6M09_04655 PF00419 Fimbrial protein C6M09_04660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_04660 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_04665 PF00577 Outer membrane usher protein C6M09_04665 PF13953 PapC C-terminal domain C6M09_04665 PF13954 PapC N-terminal domain C6M09_04670 PF00419 Fimbrial protein C6M09_04685 PF00196 Bacterial regulatory proteins, luxR family C6M09_04685 PF00072 Response regulator receiver domain C6M09_04695 PF00248 Aldo/keto reductase family C6M09_04700 PF03222 Tryptophan/tyrosine permease family C6M09_04710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_04710 PF03466 LysR substrate binding domain C6M09_04715 PF02803 Thiolase, C-terminal domain C6M09_04715 PF00108 Thiolase, N-terminal domain C6M09_04720 PF06178 Oligogalacturonate-specific porin protein (KdgM) C6M09_04725 PF14583 Oligogalacturonate lyase C6M09_04735 PF00083 Sugar (and other) transporter C6M09_04740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C6M09_04740 PF00356 Bacterial regulatory proteins, lacI family C6M09_04750 PF01306 LacY proton/sugar symporter C6M09_04755 PF00251 Glycosyl hydrolases family 32 N-terminal domain C6M09_04755 PF08244 Glycosyl hydrolases family 32 C terminal C6M09_04770 PF17912 MalK OB fold domain C6M09_04770 PF00005 ABC transporter C6M09_04775 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_04780 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_04785 PF16867 Dimethlysulfonioproprionate lyase C6M09_04790 PF01177 Asp/Glu/Hydantoin racemase C6M09_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_04795 PF03466 LysR substrate binding domain C6M09_04800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C6M09_04800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C6M09_04805 PF00356 Bacterial regulatory proteins, lacI family C6M09_04810 PF02378 Phosphotransferase system, EIIC C6M09_04815 PF00232 Glycosyl hydrolase family 1 C6M09_04820 PF07729 FCD domain C6M09_04820 PF00392 Bacterial regulatory proteins, gntR family C6M09_04830 PF00356 Bacterial regulatory proteins, lacI family C6M09_04840 PF01553 Acyltransferase C6M09_04840 PF00501 AMP-binding enzyme C6M09_04845 PF07690 Major Facilitator Superfamily C6M09_04850 PF00248 Aldo/keto reductase family C6M09_04855 PF06004 Bacterial protein of unknown function (DUF903) C6M09_04860 PF03741 Integral membrane protein TerC family C6M09_04865 PF02976 DNA mismatch repair enzyme MutH C6M09_04875 PF00293 NUDIX domain C6M09_04880 PF01590 GAF domain C6M09_04880 PF02896 PEP-utilising enzyme, TIM barrel domain C6M09_04880 PF00391 PEP-utilising enzyme, mobile domain C6M09_04880 PF05524 PEP-utilising enzyme, N-terminal C6M09_04885 PF01790 Prolipoprotein diacylglyceryl transferase C6M09_04890 PF00303 Thymidylate synthase C6M09_04895 PF07963 Prokaryotic N-terminal methylation motif C6M09_04900 PF07963 Prokaryotic N-terminal methylation motif C6M09_04905 PF10713 Protein of unknown function (DUF2509) C6M09_04910 PF12528 Type II secretion prepilin peptidase dependent protein C C6M09_04910 PF07963 Prokaryotic N-terminal methylation motif C6M09_04915 PF17946 RecC C-terminal domain C6M09_04920 PF16187 Middle or third domain of peptidase_M16 C6M09_04920 PF05193 Peptidase M16 inactive domain C6M09_04920 PF00675 Insulinase (Peptidase family M16) C6M09_04925 PF13361 UvrD-like helicase C-terminal domain C6M09_04925 PF12705 PD-(D/E)XK nuclease superfamily C6M09_04925 PF00580 UvrD/REP helicase N-terminal domain C6M09_04930 PF13538 UvrD-like helicase C-terminal domain C6M09_04940 PF00696 Amino acid kinase family C6M09_04940 PF00583 Acetyltransferase (GNAT) family C6M09_04945 PF01520 N-acetylmuramoyl-L-alanine amidase C6M09_04945 PF11741 AMIN domain C6M09_04950 PF00155 Aminotransferase class I and II C6M09_04955 PF00288 GHMP kinases N terminal domain C6M09_04960 PF00871 Acetokinase family C6M09_04965 PF10662 Ethanolamine utilisation - propanediol utilisation C6M09_04970 PF00936 BMC domain C6M09_04980 PF13237 4Fe-4S dicluster domain C6M09_04980 PF13375 RnfC Barrel sandwich hybrid domain C6M09_04980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C6M09_04980 PF10531 SLBB domain C6M09_04985 PF00465 Iron-containing alcohol dehydrogenase C6M09_04985 PF00171 Aldehyde dehydrogenase family C6M09_04990 PF00171 Aldehyde dehydrogenase family C6M09_04995 PF01923 Cobalamin adenosyltransferase C6M09_05000 PF03319 Ethanolamine utilisation protein EutN/carboxysome C6M09_05010 PF06130 Phosphate propanoyltransferase C6M09_05015 PF00936 BMC domain C6M09_05020 PF00936 BMC domain C6M09_05030 PF08841 Diol dehydratase reactivase ATPase-like domain C6M09_05030 PF18427 DD-reactivating factor swiveling domain C6M09_05035 PF02287 Dehydratase small subunit C6M09_05040 PF02288 Dehydratase medium subunit C6M09_05045 PF02286 Dehydratase large subunit C6M09_05050 PF00936 BMC domain C6M09_05055 PF00936 BMC domain C6M09_05060 PF00230 Major intrinsic protein C6M09_05065 PF10114 Sensory domain found in PocR C6M09_05065 PF12833 Helix-turn-helix domain C6M09_05070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C6M09_05070 PF07685 CobB/CobQ-like glutamine amidotransferase domain C6M09_05075 PF03186 CobD/Cbib protein C6M09_05080 PF02570 Precorrin-8X methylmutase C6M09_05085 PF01888 CbiD C6M09_05090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6M09_05095 PF05175 Methyltransferase small domain C6M09_05100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6M09_05105 PF11761 Cobalamin biosynthesis central region C6M09_05105 PF11760 Cobalamin synthesis G N-terminal C6M09_05105 PF01890 Cobalamin synthesis G C-terminus C6M09_05110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6M09_05115 PF02571 Precorrin-6x reductase CbiJ/CobK C6M09_05120 PF06180 Cobalt chelatase (CbiK) C6M09_05125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6M09_05130 PF01891 Cobalt uptake substrate-specific transmembrane region C6M09_05135 PF02553 Cobalt transport protein component CbiN C6M09_05140 PF02361 Cobalt transport protein C6M09_05145 PF00005 ABC transporter C6M09_05150 PF07685 CobB/CobQ-like glutamine amidotransferase domain C6M09_05155 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C6M09_05160 PF02277 Phosphoribosyltransferase C6M09_05180 PF03562 MltA specific insert domain C6M09_05180 PF06725 3D domain C6M09_05185 PF00899 ThiF family C6M09_05190 PF02657 Fe-S metabolism associated domain C6M09_05195 PF00266 Aminotransferase class-V C6M09_05200 PF06004 Bacterial protein of unknown function (DUF903) C6M09_05205 PF03466 LysR substrate binding domain C6M09_05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_05210 PF04241 Protein of unknown function (DUF423) C6M09_05215 PF18125 RlmM ferredoxin-like domain C6M09_05215 PF01728 FtsJ-like methyltransferase C6M09_05220 PF00455 DeoR C terminal sensor domain C6M09_05220 PF08220 DeoR-like helix-turn-helix domain C6M09_05225 PF05025 RbsD / FucU transport protein family C6M09_05230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_05230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_05235 PF07882 L-fucose isomerase, second N-terminal domain C6M09_05235 PF07881 L-fucose isomerase, first N-terminal domain C6M09_05235 PF02952 L-fucose isomerase, C-terminal domain C6M09_05240 PF07690 Major Facilitator Superfamily C6M09_05245 PF00596 Class II Aldolase and Adducin N-terminal domain C6M09_05250 PF00465 Iron-containing alcohol dehydrogenase C6M09_05255 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C6M09_05255 PF01367 5'-3' exonuclease, C-terminal SAM fold C6M09_05260 PF00158 Sigma-54 interaction domain C6M09_05270 PF00296 Luciferase-like monooxygenase C6M09_05280 PF00296 Luciferase-like monooxygenase C6M09_05285 PF00005 ABC transporter C6M09_05290 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_05295 PF03180 NLPA lipoprotein C6M09_05300 PF07690 Major Facilitator Superfamily C6M09_05310 PF09084 NMT1/THI5 like C6M09_05315 PF03315 Serine dehydratase beta chain C6M09_05315 PF03313 Serine dehydratase alpha chain C6M09_05325 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C6M09_05325 PF03641 Possible lysine decarboxylase C6M09_05325 PF11892 Domain of unknown function (DUF3412) C6M09_05330 PF14489 QueF-like protein C6M09_05330 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C6M09_05335 PF07348 Syd protein (SUKH-2) C6M09_05340 PF04287 tRNA pseudouridine synthase C C6M09_05345 PF00849 RNA pseudouridylate synthase C6M09_05350 PF00258 Flavodoxin C6M09_05355 PF07690 Major Facilitator Superfamily C6M09_05360 PF13378 Enolase C-terminal domain-like C6M09_05360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C6M09_05365 PF13378 Enolase C-terminal domain-like C6M09_05370 PF02595 Glycerate kinase family C6M09_05375 PF00672 HAMP domain C6M09_05375 PF00072 Response regulator receiver domain C6M09_05375 PF01627 Hpt domain C6M09_05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_05375 PF00512 His Kinase A (phospho-acceptor) domain C6M09_05375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C6M09_05380 PF01938 TRAM domain C6M09_05380 PF05958 tRNA (Uracil-5-)-methyltransferase C6M09_05385 PF02824 TGS domain C6M09_05385 PF04607 Region found in RelA / SpoT proteins C6M09_05385 PF13291 ACT domain C6M09_05390 PF03819 MazG nucleotide pyrophosphohydrolase domain C6M09_05395 PF00117 Glutamine amidotransferase class-I C6M09_05395 PF06418 CTP synthase N-terminus C6M09_05400 PF00113 Enolase, C-terminal TIM barrel domain C6M09_05400 PF03952 Enolase, N-terminal domain C6M09_05410 PF04055 Radical SAM superfamily C6M09_05415 PF01242 6-pyruvoyl tetrahydropterin synthase C6M09_05420 PF00667 FAD binding domain C6M09_05420 PF00175 Oxidoreductase NAD-binding domain C6M09_05420 PF00258 Flavodoxin C6M09_05425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C6M09_05425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C6M09_05430 PF01507 Phosphoadenosine phosphosulfate reductase family C6M09_05435 PF04389 Peptidase family M28 C6M09_05440 PF10414 Sirohaem synthase dimerisation region C6M09_05440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6M09_05440 PF14824 Sirohaem biosynthesis protein central C6M09_05445 PF01507 Phosphoadenosine phosphosulfate reductase family C6M09_05450 PF00009 Elongation factor Tu GTP binding domain C6M09_05460 PF12084 Protein of unknown function (DUF3561) C6M09_05465 PF04977 Septum formation initiator C6M09_05470 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C6M09_05475 PF02542 YgbB family C6M09_05480 PF01142 tRNA pseudouridine synthase D (TruD) C6M09_05485 PF01975 Survival protein SurE C6M09_05495 PF01551 Peptidase family M23 C6M09_05495 PF01476 LysM domain C6M09_05500 PF04542 Sigma-70 region 2 C6M09_05500 PF04539 Sigma-70 region 3 C6M09_05500 PF04545 Sigma-70, region 4 C6M09_05500 PF00140 Sigma-70 factor, region 1.2 C6M09_05510 PF07690 Major Facilitator Superfamily C6M09_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_05515 PF03466 LysR substrate binding domain C6M09_05520 PF01047 MarR family C6M09_05525 PF02441 Flavoprotein C6M09_05530 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C6M09_05540 PF01848 Hok/gef family C6M09_05545 PF05188 MutS domain II C6M09_05545 PF05192 MutS domain III C6M09_05545 PF05190 MutS family domain IV C6M09_05545 PF00488 MutS domain V C6M09_05545 PF01624 MutS domain I C6M09_05565 PF00005 ABC transporter C6M09_05570 PF01032 FecCD transport family C6M09_05575 PF01497 Periplasmic binding protein C6M09_05580 PF05171 Haemin-degrading HemS.ChuX domain C6M09_05585 PF07715 TonB-dependent Receptor Plug Domain C6M09_05585 PF00593 TonB dependent receptor C6M09_05595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_05595 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_05595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_05600 PF03547 Membrane transport protein C6M09_05610 PF11756 Nitrous oxide-stimulated promoter C6M09_05615 PF00950 ABC 3 transport family C6M09_05620 PF00950 ABC 3 transport family C6M09_05625 PF00005 ABC transporter C6M09_05630 PF01297 Zinc-uptake complex component A periplasmic C6M09_05635 PF00356 Bacterial regulatory proteins, lacI family C6M09_05640 PF00480 ROK family C6M09_05645 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C6M09_05650 PF02378 Phosphotransferase system, EIIC C6M09_05655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_05660 PF02378 Phosphotransferase system, EIIC C6M09_05665 PF02264 LamB porin C6M09_05675 PF00232 Glycosyl hydrolase family 1 C6M09_05680 PF02954 Bacterial regulatory protein, Fis family C6M09_05680 PF01590 GAF domain C6M09_05680 PF00158 Sigma-54 interaction domain C6M09_05685 PF02769 AIR synthase related protein, C-terminal domain C6M09_05685 PF00586 AIR synthase related protein, N-terminal domain C6M09_05690 PF01924 Hydrogenase formation hypA family C6M09_05695 PF01455 HupF/HypC family C6M09_05700 PF02492 CobW/HypB/UreG, nucleotide-binding domain C6M09_05705 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C6M09_05710 PF11046 Transcriptional repressor of hyc and hyp operons C6M09_05715 PF13247 4Fe-4S dicluster domain C6M09_05720 PF00361 Proton-conducting membrane transporter C6M09_05725 PF00146 NADH dehydrogenase C6M09_05730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C6M09_05730 PF00374 Nickel-dependent hydrogenase C6M09_05730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C6M09_05735 PF12838 4Fe-4S dicluster domain C6M09_05740 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C6M09_05745 PF07450 Formate hydrogenlyase maturation protein HycH C6M09_05750 PF01750 Hydrogenase maturation protease C6M09_05755 PF08845 Toxin SymE, type I toxin-antitoxin system C6M09_05760 PF00232 Glycosyl hydrolase family 1 C6M09_05765 PF00367 phosphotransferase system, EIIB C6M09_05765 PF02378 Phosphotransferase system, EIIC C6M09_05770 PF00356 Bacterial regulatory proteins, lacI family C6M09_05775 PF13247 4Fe-4S dicluster domain C6M09_05775 PF12800 4Fe-4S binding domain C6M09_05780 PF00708 Acylphosphatase C6M09_05780 PF17788 HypF Kae1-like domain C6M09_05780 PF01300 Telomere recombination C6M09_05780 PF07503 HypF finger C6M09_05785 PF03824 High-affinity nickel-transport protein C6M09_05790 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_05790 PF18113 Rubredoxin binding C-terminal domain C6M09_05795 PF00258 Flavodoxin C6M09_05795 PF00753 Metallo-beta-lactamase superfamily C6M09_05795 PF00301 Rubredoxin C6M09_05800 PF00158 Sigma-54 interaction domain C6M09_05800 PF01590 GAF domain C6M09_05805 PF01380 SIS domain C6M09_05805 PF00571 CBS domain C6M09_05810 PF00455 DeoR C terminal sensor domain C6M09_05810 PF08220 DeoR-like helix-turn-helix domain C6M09_05815 PF06923 Glucitol operon activator protein (GutM) C6M09_05820 PF00106 short chain dehydrogenase C6M09_05825 PF03829 PTS system glucitol/sorbitol-specific IIA component C6M09_05830 PF07663 Sorbitol phosphotransferase enzyme II C-terminus C6M09_05830 PF03612 Sorbitol phosphotransferase enzyme II N-terminus C6M09_05835 PF03608 PTS system enzyme II sorbitol-specific factor C6M09_05840 PF13406 Transglycosylase SLT domain C6M09_05845 PF00005 ABC transporter C6M09_05850 PF00950 ABC 3 transport family C6M09_05855 PF01297 Zinc-uptake complex component A periplasmic C6M09_05860 PF02464 Competence-damaged protein C6M09_05865 PF00154 recA bacterial DNA recombination protein C6M09_05870 PF02631 RecX family C6M09_05875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C6M09_05875 PF01411 tRNA synthetases class II (A) C6M09_05875 PF02272 DHHA1 domain C6M09_05880 PF02599 Global regulator protein family C6M09_05910 PF04972 BON domain C6M09_05915 PF13419 Haloacid dehalogenase-like hydrolase C6M09_05920 PF09335 SNARE associated Golgi protein C6M09_05925 PF04262 Glutamate-cysteine ligase C6M09_05930 PF02664 S-Ribosylhomocysteinase (LuxS) C6M09_05935 PF12833 Helix-turn-helix domain C6M09_05935 PF12852 Cupin C6M09_05940 PF00682 HMGL-like C6M09_05940 PF08502 LeuA allosteric (dimerisation) domain C6M09_05945 PF07690 Major Facilitator Superfamily C6M09_05950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_05950 PF00529 HlyD membrane-fusion protein of T1SS C6M09_05955 PF01047 MarR family C6M09_05960 PF05437 Branched-chain amino acid transport protein (AzlD) C6M09_05965 PF03591 AzlC protein C6M09_05970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C6M09_05975 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_05980 PF00005 ABC transporter C6M09_05980 PF00571 CBS domain C6M09_05985 PF00268 Ribonucleotide reductase, small chain C6M09_05990 PF02867 Ribonucleotide reductase, barrel domain C6M09_05990 PF00317 Ribonucleotide reductase, all-alpha domain C6M09_05990 PF08343 Ribonucleotide reductase N-terminal C6M09_05995 PF07972 NrdI Flavodoxin like C6M09_06000 PF00462 Glutaredoxin C6M09_06005 PF02627 Carboxymuconolactone decarboxylase family C6M09_06010 PF00392 Bacterial regulatory proteins, gntR family C6M09_06010 PF00155 Aminotransferase class I and II C6M09_06015 PF05957 Bacterial protein of unknown function (DUF883) C6M09_06020 PF09400 Protein of unknown function (DUF2002) C6M09_06025 PF06610 L-alanine exporter C6M09_06030 PF00816 H-NS histone family C6M09_06045 PF11127 Protein of unknown function (DUF2892) C6M09_06045 PF00581 Rhodanese-like domain C6M09_06050 PF01022 Bacterial regulatory protein, arsR family C6M09_06055 PF02525 Flavodoxin-like fold C6M09_06060 PF03466 LysR substrate binding domain C6M09_06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_06065 PF02954 Bacterial regulatory protein, Fis family C6M09_06065 PF00158 Sigma-54 interaction domain C6M09_06065 PF01590 GAF domain C6M09_06070 PF00171 Aldehyde dehydrogenase family C6M09_06075 PF16970 Type-1 fimbrial protein, A C6M09_06080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_06080 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_06085 PF00577 Outer membrane usher protein C6M09_06085 PF13953 PapC C-terminal domain C6M09_06085 PF13954 PapC N-terminal domain C6M09_06100 PF00577 Outer membrane usher protein C6M09_06100 PF13953 PapC C-terminal domain C6M09_06100 PF13954 PapC N-terminal domain C6M09_06105 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_06105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_06110 PF00419 Fimbrial protein C6M09_06115 PF00072 Response regulator receiver domain C6M09_06115 PF00196 Bacterial regulatory proteins, luxR family C6M09_06130 PF00106 short chain dehydrogenase C6M09_06135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_06140 PF00596 Class II Aldolase and Adducin N-terminal domain C6M09_06145 PF00005 ABC transporter C6M09_06150 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_06165 PF00491 Arginase family C6M09_06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_06170 PF03466 LysR substrate binding domain C6M09_06180 PF00873 AcrB/AcrD/AcrF family C6M09_06185 PF00529 HlyD membrane-fusion protein of T1SS C6M09_06185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_06190 PF01609 Transposase DDE domain C6M09_06190 PF05598 Transposase domain (DUF772) C6M09_06195 PF02899 Phage integrase, N-terminal SAM-like domain C6M09_06195 PF00589 Phage integrase family C6M09_06200 PF07022 Bacteriophage CI repressor helix-turn-helix domain C6M09_06200 PF16452 Bacteriophage CI repressor C-terminal domain C6M09_06210 PF06892 Phage regulatory protein CII (CP76) C6M09_06220 PF17282 Family of unknown function (DUF5347) C6M09_06230 PF01258 Prokaryotic dksA/traR C4-type zinc finger C6M09_06235 PF02086 D12 class N6 adenine-specific DNA methyltransferase C6M09_06240 PF05840 Bacteriophage replication gene A protein (GPA) C6M09_06245 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_06330 PF06630 Enterobacterial exodeoxyribonuclease VIII C6M09_06330 PF12684 PDDEXK-like domain of unknown function (DUF3799) C6M09_06375 PF00958 GMP synthase C terminal domain C6M09_06375 PF02540 NAD synthase C6M09_06375 PF00117 Glutamine amidotransferase class-I C6M09_06380 PF00478 IMP dehydrogenase / GMP reductase domain C6M09_06380 PF00571 CBS domain C6M09_06385 PF02601 Exonuclease VII, large subunit C6M09_06385 PF13742 OB-fold nucleic acid binding domain C6M09_06390 PF07191 zinc-ribbons C6M09_06400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C6M09_06400 PF01926 50S ribosome-binding GTPase C6M09_06405 PF13360 PQQ-like domain C6M09_06410 PF09976 Tetratricopeptide repeat-like domain C6M09_06415 PF13393 Histidyl-tRNA synthetase C6M09_06415 PF03129 Anticodon binding domain C6M09_06420 PF04551 GcpE protein C6M09_06425 PF13464 Domain of unknown function (DUF4115) C6M09_06430 PF04055 Radical SAM superfamily C6M09_06435 PF00334 Nucleoside diphosphate kinase C6M09_06440 PF06832 Penicillin-Binding Protein C-terminus Family C6M09_06440 PF00905 Penicillin binding protein transpeptidase domain C6M09_06440 PF00912 Transglycosylase C6M09_06445 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C6M09_06445 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C6M09_06445 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C6M09_06445 PF01835 MG2 domain C6M09_06445 PF07678 A-macroglobulin TED domain C6M09_06445 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C6M09_06445 PF07703 Alpha-2-macroglobulin bait region domain C6M09_06445 PF00207 Alpha-2-macroglobulin family C6M09_06445 PF17962 Bacterial macroglobulin domain 6 C6M09_06450 PF00581 Rhodanese-like domain C6M09_06460 PF14581 SseB protein C-terminal domain C6M09_06460 PF07179 SseB protein N-terminal domain C6M09_06465 PF12404 Peptidase C6M09_06465 PF00883 Cytosol aminopeptidase family, catalytic domain C6M09_06470 PF04384 Iron-sulphur cluster assembly C6M09_06475 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_06480 PF00012 Hsp70 protein C6M09_06485 PF00226 DnaJ domain C6M09_06485 PF07743 HSCB C-terminal oligomerisation domain C6M09_06490 PF01521 Iron-sulphur cluster biosynthesis C6M09_06495 PF01592 NifU-like N terminal domain C6M09_06500 PF00266 Aminotransferase class-V C6M09_06505 PF02082 Transcriptional regulator C6M09_06510 PF00588 SpoU rRNA Methylase family C6M09_06515 PF00459 Inositol monophosphatase family C6M09_06525 PF03824 High-affinity nickel-transport protein C6M09_06530 PF06226 Protein of unknown function (DUF1007) C6M09_06535 PF00874 PRD domain C6M09_06540 PF12832 MFS_1 like family C6M09_06545 PF01263 Aldose 1-epimerase C6M09_06550 PF00083 Sugar (and other) transporter C6M09_06555 PF13181 Tetratricopeptide repeat C6M09_06555 PF17128 Domain of unknown function (DUF5107) C6M09_06560 PF00480 ROK family C6M09_06565 PF07681 DoxX C6M09_06570 PF00464 Serine hydroxymethyltransferase C6M09_06575 PF00042 Globin C6M09_06575 PF00970 Oxidoreductase FAD-binding domain C6M09_06575 PF00175 Oxidoreductase NAD-binding domain C6M09_06580 PF00543 Nitrogen regulatory protein P-II C6M09_06585 PF00072 Response regulator receiver domain C6M09_06585 PF00158 Sigma-54 interaction domain C6M09_06590 PF13942 YfhG lipoprotein C6M09_06595 PF00512 His Kinase A (phospho-acceptor) domain C6M09_06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_06600 PF02769 AIR synthase related protein, C-terminal domain C6M09_06600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C6M09_06600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C6M09_06605 PF01464 Transglycosylase SLT domain C6M09_06605 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_06610 PF14437 MafB19-like deaminase C6M09_06620 PF01380 SIS domain C6M09_06620 PF01418 Helix-turn-helix domain, rpiR family C6M09_06625 PF12838 4Fe-4S dicluster domain C6M09_06630 PF01648 4'-phosphopantetheinyl transferase superfamily C6M09_06635 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C6M09_06640 PF02565 Recombination protein O C terminal C6M09_06640 PF11967 Recombination protein O N terminal C6M09_06645 PF01926 50S ribosome-binding GTPase C6M09_06645 PF07650 KH domain C6M09_06650 PF00035 Double-stranded RNA binding motif C6M09_06650 PF14622 Ribonuclease-III-like C6M09_06655 PF10502 Signal peptidase, peptidase S26 C6M09_06660 PF00679 Elongation factor G C-terminus C6M09_06660 PF00009 Elongation factor Tu GTP binding domain C6M09_06660 PF03144 Elongation factor Tu domain 2 C6M09_06660 PF06421 GTP-binding protein LepA C-terminus C6M09_06670 PF03888 MucB/RseB N-terminal domain C6M09_06670 PF17188 MucB/RseB C-terminal domain C6M09_06675 PF03873 Anti sigma-E protein RseA, C-terminal domain C6M09_06675 PF03872 Anti sigma-E protein RseA, N-terminal domain C6M09_06680 PF04542 Sigma-70 region 2 C6M09_06680 PF08281 Sigma-70, region 4 C6M09_06690 PF00890 FAD binding domain C6M09_06690 PF02910 Fumarate reductase flavoprotein C-term C6M09_06695 PF05175 Methyltransferase small domain C6M09_06700 PF00271 Helicase conserved C-terminal domain C6M09_06700 PF00270 DEAD/DEAH box helicase C6M09_06705 PF01228 Glycine radical C6M09_06710 PF03167 Uracil DNA glycosylase superfamily C6M09_06715 PF00588 SpoU rRNA Methylase family C6M09_06715 PF08032 RNA 2'-O ribose methyltransferase substrate binding C6M09_06720 PF00085 Thioredoxin C6M09_06725 PF03942 DTW domain C6M09_06730 PF13380 CoA binding domain C6M09_06730 PF00583 Acetyltransferase (GNAT) family C6M09_06730 PF13607 Succinyl-CoA ligase like flavodoxin domain C6M09_06735 PF13091 PLD-like domain C6M09_06740 PF10043 Predicted periplasmic lipoprotein (DUF2279) C6M09_06745 PF00083 Sugar (and other) transporter C6M09_06770 PF07724 AAA domain (Cdc48 subfamily) C6M09_06770 PF10431 C-terminal, D2-small domain, of ClpB protein C6M09_06770 PF02861 Clp amino terminal domain, pathogenicity island component C6M09_06770 PF17871 AAA lid domain C6M09_06770 PF00004 ATPase family associated with various cellular activities (AAA) C6M09_06775 PF02578 Multi-copper polyphenol oxidoreductase laccase C6M09_06780 PF01479 S4 domain C6M09_06780 PF00849 RNA pseudouridylate synthase C6M09_06785 PF13525 Outer membrane lipoprotein C6M09_06790 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C6M09_06800 PF01817 Chorismate mutase type II C6M09_06800 PF00800 Prephenate dehydratase C6M09_06805 PF08450 SMP-30/Gluconolactonase/LRE-like region C6M09_06810 PF02153 Prephenate dehydrogenase C6M09_06810 PF01817 Chorismate mutase type II C6M09_06815 PF00793 DAHP synthetase I family C6M09_06820 PF13689 YfiR/HmsC-like C6M09_06825 PF00990 Diguanylate cyclase, GGDEF domain C6M09_06825 PF17152 Periplasmic sensor domain C6M09_06830 PF00691 OmpA family C6M09_06845 PF01245 Ribosomal protein L19 C6M09_06850 PF01746 tRNA (Guanine-1)-methyltransferase C6M09_06855 PF01782 RimM N-terminal domain C6M09_06855 PF05239 PRC-barrel domain C6M09_06860 PF00886 Ribosomal protein S16 C6M09_06865 PF02881 SRP54-type protein, helical bundle domain C6M09_06865 PF00448 SRP54-type protein, GTPase domain C6M09_06865 PF02978 Signal peptide binding domain C6M09_06870 PF01578 Cytochrome C assembly protein C6M09_06875 PF03471 Transporter associated domain C6M09_06875 PF00571 CBS domain C6M09_06875 PF01595 Cyclin M transmembrane N-terminal domain C6M09_06880 PF01025 GrpE C6M09_06885 PF01513 ATP-NAD kinase C6M09_06890 PF02463 RecF/RecN/SMC N terminal domain C6M09_06895 PF04355 SmpA / OmlA family C6M09_06900 PF03658 RnfH family Ubiquitin C6M09_06905 PF03364 Polyketide cyclase / dehydrase and lipid transport C6M09_06910 PF01668 SmpB protein C6M09_06925 PF04606 Ogr/Delta-like zinc finger C6M09_06960 PF04984 Phage tail sheath protein subtilisin-like domain C6M09_06960 PF17482 Phage tail sheath C-terminal domain C6M09_07095 PF06183 DinI-like family C6M09_07105 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_07115 PF03592 Terminase small subunit C6M09_07115 PF10668 Phage terminase small subunit C6M09_07225 PF05598 Transposase domain (DUF772) C6M09_07225 PF01609 Transposase DDE domain C6M09_07260 PF00182 Chitinase class I C6M09_07270 PF00884 Sulfatase C6M09_07275 PF04055 Radical SAM superfamily C6M09_07275 PF13186 Iron-sulfur cluster-binding domain C6M09_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_07285 PF03466 LysR substrate binding domain C6M09_07290 PF11119 Protein of unknown function (DUF2633) C6M09_07295 PF05231 MASE1 C6M09_07295 PF00563 EAL domain C6M09_07300 PF02541 Ppx/GppA phosphatase family C6M09_07305 PF17941 Polyphosphate kinase C-terminal domain 1 C6M09_07305 PF13089 Polyphosphate kinase N-terminal domain C6M09_07305 PF02503 Polyphosphate kinase middle domain C6M09_07305 PF13090 Polyphosphate kinase C-terminal domain 2 C6M09_07310 PF00551 Formyl transferase C6M09_07315 PF00586 AIR synthase related protein, N-terminal domain C6M09_07315 PF02769 AIR synthase related protein, C-terminal domain C6M09_07320 PF00480 ROK family C6M09_07325 PF00232 Glycosyl hydrolase family 1 C6M09_07335 PF00860 Permease family C6M09_07340 PF00308 Bacterial dnaA protein C6M09_07345 PF04754 Putative transposase, YhgA-like C6M09_07350 PF03960 ArsC family C6M09_07355 PF01435 Peptidase family M48 C6M09_07365 PF01594 AI-2E family transporter C6M09_07370 PF00578 AhpC/TSA family C6M09_07375 PF01842 ACT domain C6M09_07380 PF00701 Dihydrodipicolinate synthetase family C6M09_07385 PF06804 NlpB/DapX lipoprotein C6M09_07390 PF01259 SAICAR synthetase C6M09_07395 PF04228 Putative neutral zinc metallopeptidase C6M09_07400 PF13718 GNAT acetyltransferase 2 C6M09_07400 PF17176 tRNA-binding domain C6M09_07400 PF08351 Domain of unknown function (DUF1726) C6M09_07400 PF05127 Helicase C6M09_07405 PF02230 Phospholipase/Carboxylesterase C6M09_07410 PF13980 Uncharacterised protein family (UPF0370) C6M09_07415 PF07687 Peptidase dimerisation domain C6M09_07415 PF01546 Peptidase family M20/M25/M40 C6M09_07420 PF03960 ArsC family C6M09_07430 PF00873 AcrB/AcrD/AcrF family C6M09_07435 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_07435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C6M09_07435 PF13247 4Fe-4S dicluster domain C6M09_07440 PF00293 NUDIX domain C6M09_07445 PF06674 Protein of unknown function (DUF1176) C6M09_07450 PF02779 Transketolase, pyrimidine binding domain C6M09_07450 PF02780 Transketolase, C-terminal domain C6M09_07450 PF00456 Transketolase, thiamine diphosphate binding domain C6M09_07455 PF00923 Transaldolase/Fructose-6-phosphate aldolase C6M09_07460 PF03949 Malic enzyme, NAD binding domain C6M09_07460 PF00390 Malic enzyme, N-terminal domain C6M09_07460 PF01515 Phosphate acetyl/butaryl transferase C6M09_07465 PF00936 BMC domain C6M09_07470 PF10662 Ethanolamine utilisation - propanediol utilisation C6M09_07475 PF06249 Ethanolamine utilisation protein EutQ C6M09_07480 PF01923 Cobalamin adenosyltransferase C6M09_07485 PF01515 Phosphate acetyl/butaryl transferase C6M09_07490 PF00936 BMC domain C6M09_07495 PF03319 Ethanolamine utilisation protein EutN/carboxysome C6M09_07500 PF00171 Aldehyde dehydrogenase family C6M09_07510 PF00465 Iron-containing alcohol dehydrogenase C6M09_07515 PF04346 Ethanolamine utilisation protein, EutH C6M09_07520 PF06277 Ethanolamine utilisation protein EutA C6M09_07525 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C6M09_07530 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C6M09_07535 PF00936 BMC domain C6M09_07540 PF16365 Ethanolamine utilization protein EutK C-terminus C6M09_07540 PF00936 BMC domain C6M09_07545 PF12833 Helix-turn-helix domain C6M09_07550 PF01218 Coproporphyrinogen III oxidase C6M09_07555 PF01520 N-acetylmuramoyl-L-alanine amidase C6M09_07560 PF00583 Acetyltransferase (GNAT) family C6M09_07565 PF11143 Protein of unknown function (DUF2919) C6M09_07570 PF06572 Protein of unknown function (DUF1131) C6M09_07575 PF04261 Dyp-type peroxidase family C6M09_07590 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_07595 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_07600 PF00005 ABC transporter C6M09_07605 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_07610 PF13474 SnoaL-like domain C6M09_07615 PF00155 Aminotransferase class I and II C6M09_07615 PF00392 Bacterial regulatory proteins, gntR family C6M09_07620 PF08543 Phosphomethylpyrimidine kinase C6M09_07630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6M09_07635 PF02896 PEP-utilising enzyme, TIM barrel domain C6M09_07635 PF05524 PEP-utilising enzyme, N-terminal C6M09_07635 PF00391 PEP-utilising enzyme, mobile domain C6M09_07640 PF00381 PTS HPr component phosphorylation site C6M09_07645 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_07655 PF04354 ZipA, C-terminal FtsZ-binding domain C6M09_07660 PF01653 NAD-dependent DNA ligase adenylation domain C6M09_07660 PF12826 Helix-hairpin-helix motif C6M09_07660 PF03120 NAD-dependent DNA ligase OB-fold domain C6M09_07660 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C6M09_07660 PF00533 BRCA1 C Terminus (BRCT) domain C6M09_07665 PF12843 Putative quorum-sensing-regulated virulence factor C6M09_07670 PF13593 SBF-like CPA transporter family (DUF4137) C6M09_07675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_07675 PF03466 LysR substrate binding domain C6M09_07700 PF00749 tRNA synthetases class I (E and Q), catalytic domain C6M09_07705 PF07037 Putative transcription regulator (DUF1323) C6M09_07710 PF07037 Putative transcription regulator (DUF1323) C6M09_07725 PF00563 EAL domain C6M09_07725 PF05231 MASE1 C6M09_07730 PF07670 Nucleoside recognition C6M09_07730 PF07662 Na+ dependent nucleoside transporter C-terminus C6M09_07730 PF01773 Na+ dependent nucleoside transporter N-terminus C6M09_07735 PF01566 Natural resistance-associated macrophage protein C6M09_07740 PF10697 Protein of unknown function (DUF2502) C6M09_07745 PF00248 Aldo/keto reductase family C6M09_07750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_07750 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_07750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_07755 PF00654 Voltage gated chloride channel C6M09_07760 PF02685 Glucokinase C6M09_07765 PF00072 Response regulator receiver domain C6M09_07765 PF04397 LytTr DNA-binding domain C6M09_07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_07770 PF06580 Histidine kinase C6M09_07770 PF07694 5TMR of 5TMR-LYT C6M09_07785 PF00155 Aminotransferase class I and II C6M09_07795 PF07690 Major Facilitator Superfamily C6M09_07800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C6M09_07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_07805 PF03466 LysR substrate binding domain C6M09_07825 PF01226 Formate/nitrite transporter C6M09_07830 PF04333 MlaA lipoprotein C6M09_07835 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C6M09_07840 PF04175 Protein of unknown function (DUF406) C6M09_07845 PF02803 Thiolase, C-terminal domain C6M09_07845 PF00108 Thiolase, N-terminal domain C6M09_07850 PF00378 Enoyl-CoA hydratase/isomerase C6M09_07850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C6M09_07850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C6M09_07855 PF00300 Histidine phosphatase superfamily (branch 1) C6M09_07860 PF01713 Smr domain C6M09_07865 PF05175 Methyltransferase small domain C6M09_07870 PF01264 Chorismate synthase C6M09_07875 PF03411 Penicillin-insensitive murein endopeptidase C6M09_07880 PF01925 Sulfite exporter TauE/SafE C6M09_07885 PF04315 Elongation factor P hydroxylase C6M09_07890 PF08891 YfcL protein C6M09_07895 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C6M09_07895 PF01266 FAD dependent oxidoreductase C6M09_07900 PF00109 Beta-ketoacyl synthase, N-terminal domain C6M09_07900 PF02801 Beta-ketoacyl synthase, C-terminal domain C6M09_07905 PF07690 Major Facilitator Superfamily C6M09_07915 PF11890 Domain of unknown function (DUF3410) C6M09_07915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6M09_07915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_07920 PF01118 Semialdehyde dehydrogenase, NAD binding domain C6M09_07920 PF02774 Semialdehyde dehydrogenase, dimerisation domain C6M09_07925 PF01416 tRNA pseudouridine synthase C6M09_07930 PF09335 SNARE associated Golgi protein C6M09_07935 PF17848 Acetyl-coA carboxylase zinc finger domain C6M09_07935 PF01039 Carboxyl transferase domain C6M09_07940 PF08245 Mur ligase middle domain C6M09_07940 PF02875 Mur ligase family, glutamate ligase domain C6M09_07945 PF05036 Sporulation related domain C6M09_07950 PF02674 Colicin V production protein C6M09_07955 PF00156 Phosphoribosyl transferase domain C6M09_07960 PF02441 Flavoprotein C6M09_07970 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_07975 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_07980 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_07985 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_07990 PF00005 ABC transporter C6M09_07995 PF13302 Acetyltransferase (GNAT) domain C6M09_08005 PF08338 Domain of unknown function (DUF1731) C6M09_08005 PF01370 NAD dependent epimerase/dehydratase family C6M09_08010 PF02152 Dihydroneopterin aldolase C6M09_08015 PF02798 Glutathione S-transferase, N-terminal domain C6M09_08015 PF00043 Glutathione S-transferase, C-terminal domain C6M09_08020 PF14834 Glutathione S-transferase, C-terminal domain C6M09_08020 PF02798 Glutathione S-transferase, N-terminal domain C6M09_08025 PF12850 Calcineurin-like phosphoesterase superfamily domain C6M09_08030 PF00293 NUDIX domain C6M09_08035 PF01515 Phosphate acetyl/butaryl transferase C6M09_08035 PF07085 DRTGG domain C6M09_08040 PF00871 Acetokinase family C6M09_08045 PF04217 Protein of unknown function, DUF412 C6M09_08050 PF03887 YfbU domain C6M09_08055 PF13419 Haloacid dehalogenase-like hydrolase C6M09_08060 PF02080 TrkA-C domain C6M09_08060 PF03600 Citrate transporter C6M09_08070 PF00155 Aminotransferase class I and II C6M09_08075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_08075 PF03466 LysR substrate binding domain C6M09_08080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C6M09_08085 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C6M09_08090 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C6M09_08090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C6M09_08100 PF10531 SLBB domain C6M09_08100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C6M09_08100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C6M09_08105 PF01568 Molydopterin dinucleotide binding domain C6M09_08105 PF00384 Molybdopterin oxidoreductase C6M09_08105 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C6M09_08105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C6M09_08110 PF00146 NADH dehydrogenase C6M09_08115 PF12838 4Fe-4S dicluster domain C6M09_08120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C6M09_08125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C6M09_08130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C6M09_08130 PF00361 Proton-conducting membrane transporter C6M09_08135 PF00361 Proton-conducting membrane transporter C6M09_08140 PF00361 Proton-conducting membrane transporter C6M09_08145 PF12706 Beta-lactamase superfamily domain C6M09_08150 PF13673 Acetyltransferase (GNAT) domain C6M09_08155 PF00425 chorismate binding enzyme C6M09_08160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_08160 PF16582 Middle domain of thiamine pyrophosphate C6M09_08160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_08165 PF12697 Alpha/beta hydrolase family C6M09_08170 PF00378 Enoyl-CoA hydratase/isomerase C6M09_08175 PF13378 Enolase C-terminal domain-like C6M09_08180 PF00501 AMP-binding enzyme C6M09_08180 PF13193 AMP-binding enzyme C-terminal domain C6M09_08185 PF00293 NUDIX domain C6M09_08190 PF04754 Putative transposase, YhgA-like C6M09_08195 PF07437 YfaZ precursor C6M09_08200 PF00994 Probable molybdopterin binding domain C6M09_08205 PF01614 Bacterial transcriptional regulator C6M09_08205 PF09339 IclR helix-turn-helix domain C6M09_08210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C6M09_08210 PF13378 Enolase C-terminal domain-like C6M09_08215 PF07690 Major Facilitator Superfamily C6M09_08220 PF03328 HpcH/HpaI aldolase/citrate lyase family C6M09_08225 PF02754 Cysteine-rich domain C6M09_08225 PF13183 4Fe-4S dicluster domain C6M09_08230 PF00890 FAD binding domain C6M09_08235 PF01266 FAD dependent oxidoreductase C6M09_08235 PF04324 BFD-like [2Fe-2S] binding domain C6M09_08245 PF03009 Glycerophosphoryl diester phosphodiesterase family C6M09_08250 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_08255 PF00268 Ribonucleotide reductase, small chain C6M09_08260 PF00317 Ribonucleotide reductase, all-alpha domain C6M09_08260 PF03477 ATP cone domain C6M09_08260 PF02867 Ribonucleotide reductase, barrel domain C6M09_08270 PF03989 DNA gyrase C-terminal domain, beta-propeller C6M09_08270 PF00521 DNA gyrase/topoisomerase IV, subunit A C6M09_08275 PF00072 Response regulator receiver domain C6M09_08275 PF09456 RcsC Alpha-Beta-Loop (ABL) C6M09_08275 PF00512 His Kinase A (phospho-acceptor) domain C6M09_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_08280 PF00072 Response regulator receiver domain C6M09_08280 PF00196 Bacterial regulatory proteins, luxR family C6M09_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_08285 PF01627 Hpt domain C6M09_08285 PF16359 RcsD-ABL domain C6M09_08290 PF00267 Gram-negative porin C6M09_08295 PF02424 ApbE family C6M09_08300 PF02805 Metal binding domain of Ada C6M09_08300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C6M09_08300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C6M09_08300 PF12833 Helix-turn-helix domain C6M09_08305 PF13532 2OG-Fe(II) oxygenase superfamily C6M09_08310 PF00005 ABC transporter C6M09_08315 PF00571 CBS domain C6M09_08315 PF03448 MgtE intracellular N domain C6M09_08315 PF01769 Divalent cation transporter C6M09_08320 PF01740 STAS domain C6M09_08320 PF00916 Sulfate permease family C6M09_08325 PF06039 Malate:quinone oxidoreductase (Mqo) C6M09_08330 PF03974 Ecotin C6M09_08335 PF01594 AI-2E family transporter C6M09_08345 PF00884 Sulfatase C6M09_08345 PF11893 Domain of unknown function (DUF3413) C6M09_08350 PF07208 Protein of unknown function (DUF1414) C6M09_08355 PF04245 37-kD nucleoid-associated bacterial protein C6M09_08360 PF00455 DeoR C terminal sensor domain C6M09_08360 PF08220 DeoR-like helix-turn-helix domain C6M09_08365 PF00293 NUDIX domain C6M09_08370 PF00144 Beta-lactamase C6M09_08380 PF01386 Ribosomal L25p family C6M09_08385 PF00271 Helicase conserved C-terminal domain C6M09_08385 PF04851 Type III restriction enzyme, res subunit C6M09_08390 PF01479 S4 domain C6M09_08390 PF00849 RNA pseudouridylate synthase C6M09_08395 PF07690 Major Facilitator Superfamily C6M09_08400 PF13989 YejG-like protein C6M09_08405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_08405 PF00005 ABC transporter C6M09_08410 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_08410 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_08415 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_08420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_08425 PF12792 CSS motif domain associated with EAL C6M09_08425 PF00563 EAL domain C6M09_08430 PF00877 NlpC/P60 family C6M09_08435 PF01569 PAP2 superfamily C6M09_08440 PF02492 CobW/HypB/UreG, nucleotide-binding domain C6M09_08440 PF07683 Cobalamin synthesis protein cobW C-terminal domain C6M09_08445 PF08125 Mannitol dehydrogenase C-terminal domain C6M09_08445 PF01232 Mannitol dehydrogenase Rossmann domain C6M09_08450 PF03786 D-mannonate dehydratase (UxuA) C6M09_08455 PF08207 Elongation factor P (EF-P) KOW-like domain C6M09_08455 PF09285 Elongation factor P, C-terminal C6M09_08455 PF01132 Elongation factor P (EF-P) OB domain C6M09_08460 PF03692 Putative zinc- or iron-chelating domain C6M09_08470 PF07690 Major Facilitator Superfamily C6M09_08475 PF00381 PTS HPr component phosphorylation site C6M09_08475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_08480 PF00294 pfkB family carbohydrate kinase C6M09_08485 PF02378 Phosphotransferase system, EIIC C6M09_08485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_08490 PF01261 Xylose isomerase-like TIM barrel C6M09_08495 PF03601 Conserved hypothetical protein 698 C6M09_08500 PF03466 LysR substrate binding domain C6M09_08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_08505 PF00324 Amino acid permease C6M09_08515 PF00593 TonB dependent receptor C6M09_08515 PF07715 TonB-dependent Receptor Plug Domain C6M09_08520 PF00756 Putative esterase C6M09_08525 PF01227 GTP cyclohydrolase I C6M09_08530 PF04235 Protein of unknown function (DUF418) C6M09_08535 PF00356 Bacterial regulatory proteins, lacI family C6M09_08540 PF13407 Periplasmic binding protein domain C6M09_08545 PF00005 ABC transporter C6M09_08550 PF02653 Branched-chain amino acid transport system / permease component C6M09_08555 PF02698 DUF218 domain C6M09_08560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C6M09_08560 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C6M09_08565 PF04172 LrgB-like family C6M09_08570 PF03788 LrgA family C6M09_08575 PF01207 Dihydrouridine synthase (Dus) C6M09_08580 PF04966 Carbohydrate-selective porin, OprB family C6M09_08585 PF00874 PRD domain C6M09_08585 PF03123 CAT RNA binding domain C6M09_08590 PF02378 Phosphotransferase system, EIIC C6M09_08590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6M09_08590 PF00367 phosphotransferase system, EIIB C6M09_08595 PF00232 Glycosyl hydrolase family 1 C6M09_08600 PF02321 Outer membrane efflux protein C6M09_08605 PF09335 SNARE associated Golgi protein C6M09_08610 PF04893 Yip1 domain C6M09_08615 PF00768 D-alanyl-D-alanine carboxypeptidase C6M09_08630 PF09330 D-lactate dehydrogenase, membrane binding C6M09_08630 PF01565 FAD binding domain C6M09_08635 PF01915 Glycosyl hydrolase family 3 C-terminal domain C6M09_08635 PF00933 Glycosyl hydrolase family 3 N terminal domain C6M09_08635 PF14310 Fibronectin type III-like domain C6M09_08640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C6M09_08645 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_08650 PF00005 ABC transporter C6M09_08655 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_08665 PF06580 Histidine kinase C6M09_08665 PF07694 5TMR of 5TMR-LYT C6M09_08670 PF00072 Response regulator receiver domain C6M09_08670 PF04397 LytTr DNA-binding domain C6M09_08675 PF07308 Protein of unknown function (DUF1456) C6M09_08680 PF01588 Putative tRNA binding domain C6M09_08680 PF09334 tRNA synthetases class I (M) C6M09_08685 PF10609 NUBPL iron-transfer P-loop NTPase C6M09_08695 PF11776 Nickel/cobalt transporter regulator C6M09_08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_08700 PF03466 LysR substrate binding domain C6M09_08705 PF00860 Permease family C6M09_08710 PF13382 Adenine deaminase C-terminal domain C6M09_08710 PF01979 Amidohydrolase family C6M09_08715 PF03466 LysR substrate binding domain C6M09_08715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_08725 PF02110 Hydroxyethylthiazole kinase family C6M09_08730 PF08543 Phosphomethylpyrimidine kinase C6M09_08735 PF01791 DeoC/LacD family aldolase C6M09_08740 PF07690 Major Facilitator Superfamily C6M09_08745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_08745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_08750 PF00106 short chain dehydrogenase C6M09_08755 PF00356 Bacterial regulatory proteins, lacI family C6M09_08760 PF04198 Putative sugar-binding domain C6M09_08765 PF01232 Mannitol dehydrogenase Rossmann domain C6M09_08765 PF08125 Mannitol dehydrogenase C-terminal domain C6M09_08770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_08770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_08775 PF07690 Major Facilitator Superfamily C6M09_08780 PF13419 Haloacid dehalogenase-like hydrolase C6M09_08785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C6M09_08785 PF13378 Enolase C-terminal domain-like C6M09_08790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_08795 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_08800 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_08800 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_08805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_08805 PF00005 ABC transporter C6M09_08810 PF00005 ABC transporter C6M09_08810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_08815 PF00781 Diacylglycerol kinase catalytic domain C6M09_08820 PF16325 Peptidase family U32 C-terminal domain C6M09_08820 PF01136 Peptidase family U32 C6M09_08825 PF00072 Response regulator receiver domain C6M09_08825 PF00486 Transcriptional regulatory protein, C terminal C6M09_08830 PF00672 HAMP domain C6M09_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_08830 PF00512 His Kinase A (phospho-acceptor) domain C6M09_08835 PF07690 Major Facilitator Superfamily C6M09_08840 PF00873 AcrB/AcrD/AcrF family C6M09_08845 PF00873 AcrB/AcrD/AcrF family C6M09_08850 PF13533 Biotin-lipoyl like C6M09_08855 PF00375 Sodium:dicarboxylate symporter family C6M09_08870 PF00486 Transcriptional regulatory protein, C terminal C6M09_08870 PF00072 Response regulator receiver domain C6M09_08875 PF00512 His Kinase A (phospho-acceptor) domain C6M09_08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_08875 PF00672 HAMP domain C6M09_08875 PF13426 PAS domain C6M09_08880 PF00012 Hsp70 protein C6M09_08885 PF00730 HhH-GPD superfamily base excision DNA repair protein C6M09_08885 PF06029 AlkA N-terminal domain C6M09_08890 PF00485 Phosphoribulokinase / Uridine kinase family C6M09_08895 PF00692 dUTPase C6M09_08900 PF05170 AsmA family C6M09_08905 PF00571 CBS domain C6M09_08905 PF03741 Integral membrane protein TerC family C6M09_08905 PF03471 Transporter associated domain C6M09_08910 PF00483 Nucleotidyl transferase C6M09_08915 PF01569 PAP2 superfamily C6M09_08920 PF14052 Capsule assembly protein Wzi C6M09_08925 PF10531 SLBB domain C6M09_08925 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C6M09_08925 PF02563 Polysaccharide biosynthesis/export protein C6M09_08930 PF01451 Low molecular weight phosphotyrosine protein phosphatase C6M09_08935 PF13614 AAA domain C6M09_08935 PF13807 G-rich domain on putative tyrosine kinase C6M09_08935 PF02706 Chain length determinant protein C6M09_08960 PF00535 Glycosyl transferase family 2 C6M09_08970 PF13439 Glycosyltransferase Family 4 C6M09_08970 PF00534 Glycosyl transferases group 1 C6M09_08980 PF00534 Glycosyl transferases group 1 C6M09_08980 PF13439 Glycosyltransferase Family 4 C6M09_08985 PF02397 Bacterial sugar transferase C6M09_08990 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C6M09_08990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C6M09_08995 PF00483 Nucleotidyl transferase C6M09_08995 PF01050 Mannose-6-phosphate isomerase C6M09_09000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C6M09_09000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C6M09_09000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C6M09_09000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C6M09_09005 PF16363 GDP-mannose 4,6 dehydratase C6M09_09010 PF00483 Nucleotidyl transferase C6M09_09015 PF04321 RmlD substrate binding domain C6M09_09020 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C6M09_09025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C6M09_09025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C6M09_09025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C6M09_09035 PF01609 Transposase DDE domain C6M09_09035 PF05598 Transposase domain (DUF772) C6M09_09050 PF01370 NAD dependent epimerase/dehydratase family C6M09_09055 PF01061 ABC-2 type transporter C6M09_09060 PF00005 ABC transporter C6M09_09070 PF03275 UDP-galactopyranose mutase C6M09_09080 PF00534 Glycosyl transferases group 1 C6M09_09080 PF13439 Glycosyltransferase Family 4 C6M09_09085 PF00535 Glycosyl transferase family 2 C6M09_09090 PF01502 Phosphoribosyl-AMP cyclohydrolase C6M09_09090 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C6M09_09095 PF00977 Histidine biosynthesis protein C6M09_09100 PF00977 Histidine biosynthesis protein C6M09_09105 PF00117 Glutamine amidotransferase class-I C6M09_09110 PF08645 Polynucleotide kinase 3 phosphatase C6M09_09110 PF00475 Imidazoleglycerol-phosphate dehydratase C6M09_09115 PF00155 Aminotransferase class I and II C6M09_09120 PF00815 Histidinol dehydrogenase C6M09_09125 PF01634 ATP phosphoribosyltransferase C6M09_09125 PF08029 HisG, C-terminal domain C6M09_09135 PF01370 NAD dependent epimerase/dehydratase family C6M09_09140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_09140 PF03466 LysR substrate binding domain C6M09_09150 PF13520 Amino acid permease C6M09_09155 PF01022 Bacterial regulatory protein, arsR family C6M09_09160 PF00679 Elongation factor G C-terminus C6M09_09160 PF03764 Elongation factor G, domain IV C6M09_09160 PF00009 Elongation factor Tu GTP binding domain C6M09_09160 PF14492 Elongation Factor G, domain II C6M09_09160 PF03144 Elongation factor Tu domain 2 C6M09_09170 PF00929 Exonuclease C6M09_09170 PF08411 Exonuclease C-terminal C6M09_09175 PF00768 D-alanyl-D-alanine carboxypeptidase C6M09_09175 PF07943 Penicillin-binding protein 5, C-terminal domain C6M09_09180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_09185 PF06445 GyrI-like small molecule binding domain C6M09_09190 PF04632 Fusaric acid resistance protein family C6M09_09195 PF04363 Protein of unknown function (DUF496) C6M09_09200 PF02654 Cobalamin-5-phosphate synthase C6M09_09205 PF02277 Phosphoribosyltransferase C6M09_09210 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C6M09_09210 PF05221 S-adenosyl-L-homocysteine hydrolase C6M09_09220 PF14552 Tautomerase enzyme C6M09_09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_09225 PF03466 LysR substrate binding domain C6M09_09235 PF07690 Major Facilitator Superfamily C6M09_09235 PF00083 Sugar (and other) transporter C6M09_09245 PF03707 Bacterial signalling protein N terminal repeat C6M09_09245 PF13188 PAS domain C6M09_09245 PF00990 Diguanylate cyclase, GGDEF domain C6M09_09245 PF00563 EAL domain C6M09_09260 PF09313 Domain of unknown function (DUF1971) C6M09_09265 PF08956 Domain of unknown function (DUF1869) C6M09_09270 PF03466 LysR substrate binding domain C6M09_09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_09280 PF00561 alpha/beta hydrolase fold C6M09_09285 PF00990 Diguanylate cyclase, GGDEF domain C6M09_09335 PF04002 RadC-like JAB domain C6M09_09370 PF00437 Type II/IV secretion system protein C6M09_09375 PF03743 Bacterial conjugation TrbI-like protein C6M09_09380 PF03524 Conjugal transfer protein C6M09_09405 PF04956 TrbC/VIRB2 family C6M09_09450 PF07715 TonB-dependent Receptor Plug Domain C6M09_09450 PF00593 TonB dependent receptor C6M09_09455 PF13193 AMP-binding enzyme C-terminal domain C6M09_09455 PF00501 AMP-binding enzyme C6M09_09460 PF00975 Thioesterase domain C6M09_09470 PF16197 Ketoacyl-synthetase C-terminal extension C6M09_09470 PF00698 Acyl transferase domain C6M09_09470 PF00109 Beta-ketoacyl synthase, N-terminal domain C6M09_09470 PF00668 Condensation domain C6M09_09470 PF02801 Beta-ketoacyl synthase, C-terminal domain C6M09_09470 PF00550 Phosphopantetheine attachment site C6M09_09475 PF08242 Methyltransferase domain C6M09_09475 PF00501 AMP-binding enzyme C6M09_09475 PF00550 Phosphopantetheine attachment site C6M09_09475 PF00668 Condensation domain C6M09_09485 PF08021 Siderophore-interacting FAD-binding domain C6M09_09485 PF00664 ABC transporter transmembrane region C6M09_09485 PF00005 ABC transporter C6M09_09485 PF04954 Siderophore-interacting protein C6M09_09490 PF00005 ABC transporter C6M09_09490 PF00664 ABC transporter transmembrane region C6M09_09495 PF07690 Major Facilitator Superfamily C6M09_09500 PF00425 chorismate binding enzyme C6M09_09505 PF00589 Phage integrase family C6M09_09505 PF13356 Arm DNA-binding domain C6M09_09515 PF01554 MatE C6M09_09525 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus C6M09_09525 PF01048 Phosphorylase superfamily C6M09_09535 PF12146 Serine aminopeptidase, S33 C6M09_09545 PF00107 Zinc-binding dehydrogenase C6M09_09545 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_09555 PF00999 Sodium/hydrogen exchanger family C6M09_09565 PF03466 LysR substrate binding domain C6M09_09565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_09570 PF03466 LysR substrate binding domain C6M09_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_09575 PF17969 L,D-transpeptidase C-terminal domain C6M09_09575 PF03734 L,D-transpeptidase catalytic domain C6M09_09580 PF03466 LysR substrate binding domain C6M09_09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_09590 PF06167 Glucose-regulated metallo-peptidase M90 C6M09_09600 PF00267 Gram-negative porin C6M09_09610 PF01966 HD domain C6M09_09615 PF18284 DNA methylase N-terminal domain C6M09_09615 PF00145 C-5 cytosine-specific DNA methylase C6M09_09620 PF03852 DNA mismatch endonuclease Vsr C6M09_09625 PF00892 EamA-like transporter family C6M09_09630 PF05661 Protein of unknown function (DUF808) C6M09_09635 PF17151 Periplasmic sensor domain C6M09_09635 PF00990 Diguanylate cyclase, GGDEF domain C6M09_09640 PF10733 Protein of unknown function (DUF2525) C6M09_09645 PF10781 Dextransucrase DSRB C6M09_09650 PF00196 Bacterial regulatory proteins, luxR family C6M09_09655 PF13987 YedD-like protein C6M09_09660 PF02806 Alpha amylase, C-terminal all-beta domain C6M09_09660 PF00128 Alpha amylase, catalytic domain C6M09_09665 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_09670 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_09675 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_09680 PF00005 ABC transporter C6M09_09685 PF00196 Bacterial regulatory proteins, luxR family C6M09_09685 PF03472 Autoinducer binding domain C6M09_09690 PF10769 Protein of unknown function (DUF2594) C6M09_09695 PF00072 Response regulator receiver domain C6M09_09695 PF00196 Bacterial regulatory proteins, luxR family C6M09_09700 PF08459 UvrC Helix-hairpin-helix N-terminal C6M09_09700 PF02151 UvrB/uvrC motif C6M09_09700 PF01541 GIY-YIG catalytic domain C6M09_09705 PF01066 CDP-alcohol phosphatidyltransferase C6M09_09725 PF00701 Dihydrodipicolinate synthetase family C6M09_09730 PF03695 Uncharacterised protein family (UPF0149) C6M09_09730 PF02810 SEC-C motif C6M09_09735 PF03222 Tryptophan/tyrosine permease family C6M09_09740 PF10678 Protein of unknown function (DUF2492) C6M09_09745 PF00210 Ferritin-like domain C6M09_09760 PF07690 Major Facilitator Superfamily C6M09_09765 PF10964 Protein of unknown function (DUF2766) C6M09_09780 PF00210 Ferritin-like domain C6M09_09795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C6M09_09800 PF00005 ABC transporter C6M09_09805 PF02653 Branched-chain amino acid transport system / permease component C6M09_09810 PF02358 Trehalose-phosphatase C6M09_09815 PF00982 Glycosyltransferase family 20 C6M09_09820 PF00582 Universal stress protein family C6M09_09830 PF07470 Glycosyl Hydrolase Family 88 C6M09_09835 PF03485 Arginyl tRNA synthetase N terminal domain C6M09_09835 PF05746 DALR anticodon binding domain C6M09_09835 PF00750 tRNA synthetases class I (R) C6M09_09840 PF06185 YecM protein C6M09_09845 PF03932 CutC family C6M09_09850 PF08003 Protein of unknown function (DUF1698) C6M09_09855 PF13649 Methyltransferase domain C6M09_09860 PF01124 MAPEG family C6M09_09865 PF01904 Protein of unknown function DUF72 C6M09_09870 PF00857 Isochorismatase family C6M09_09875 PF02938 GAD domain C6M09_09875 PF01336 OB-fold nucleic acid binding domain C6M09_09875 PF00152 tRNA synthetases class II (D, K and N) C6M09_09880 PF00293 NUDIX domain C6M09_09885 PF01709 Transcriptional regulator C6M09_09890 PF02075 Crossover junction endodeoxyribonuclease RuvC C6M09_09895 PF01330 RuvA N terminal domain C6M09_09895 PF07499 RuvA, C-terminal domain C6M09_09900 PF17864 RuvB AAA lid domain C6M09_09900 PF05491 RuvB C-terminal winged helix domain C6M09_09900 PF05496 Holliday junction DNA helicase RuvB P-loop domain C6M09_09905 PF00950 ABC 3 transport family C6M09_09910 PF00005 ABC transporter C6M09_09915 PF01297 Zinc-uptake complex component A periplasmic C6M09_09920 PF01476 LysM domain C6M09_09920 PF01551 Peptidase family M23 C6M09_09920 PF08525 Opacity-associated protein A N-terminal motif C6M09_09925 PF03279 Bacterial lipid A biosynthesis acyltransferase C6M09_09930 PF00224 Pyruvate kinase, barrel domain C6M09_09930 PF02887 Pyruvate kinase, alpha/beta domain C6M09_09935 PF01418 Helix-turn-helix domain, rpiR family C6M09_09935 PF01380 SIS domain C6M09_09945 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C6M09_09945 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C6M09_09950 PF00920 Dehydratase family C6M09_09955 PF01081 KDPG and KHG aldolase C6M09_09960 PF02222 ATP-grasp domain C6M09_09965 PF07130 YebG protein C6M09_09970 PF04391 Protein of unknown function (DUF533) C6M09_09975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C6M09_09975 PF00326 Prolyl oligopeptidase family C6M09_09980 PF00929 Exonuclease C6M09_09985 PF06440 DNA polymerase III, theta subunit C6M09_09990 PF04234 CopC domain C6M09_09995 PF05425 Copper resistance protein D C6M09_10000 PF10709 Protein of unknown function (DUF2511) C6M09_10010 PF04393 Protein of unknown function (DUF535) C6M09_10015 PF00149 Calcineurin-like phosphoesterase C6M09_10020 PF07358 Protein of unknown function (DUF1482) C6M09_10025 PF07351 Protein of unknown function (DUF1480) C6M09_10030 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C6M09_10030 PF01189 16S rRNA methyltransferase RsmB/F C6M09_10030 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C6M09_10035 PF02470 MlaD protein C6M09_10040 PF04403 Paraquat-inducible protein A C6M09_10045 PF13185 GAF domain C6M09_10050 PF17516 ProQ C-terminal domain C6M09_10050 PF04352 ProQ/FINO family C6M09_10055 PF03572 Peptidase family S41 C6M09_10055 PF00595 PDZ domain C6M09_10055 PF11818 C-terminal domain of tail specific protease (DUF3340) C6M09_10055 PF17804 Tail specific protease N-terminal domain C6M09_10060 PF01435 Peptidase family M48 C6M09_10065 PF07690 Major Facilitator Superfamily C6M09_10070 PF09339 IclR helix-turn-helix domain C6M09_10070 PF01614 Bacterial transcriptional regulator C6M09_10075 PF13996 YobH-like protein C6M09_10080 PF13998 MgrB protein C6M09_10085 PF13974 YebO-like protein C6M09_10090 PF10736 Protein of unknown function (DUF2627) C6M09_10095 PF00313 'Cold-shock' DNA-binding domain C6M09_10100 PF03717 Penicillin-binding Protein dimerisation domain C6M09_10100 PF00905 Penicillin binding protein transpeptidase domain C6M09_10105 PF13847 Methyltransferase domain C6M09_10110 PF02659 Putative manganese efflux pump C6M09_10115 PF06173 Protein of unknown function (DUF986) C6M09_10120 PF03613 PTS system mannose/fructose/sorbose family IID component C6M09_10125 PF03609 PTS system sorbose-specific iic component C6M09_10130 PF03830 PTS system sorbose subfamily IIB component C6M09_10130 PF03610 PTS system fructose IIA component C6M09_10135 PF03471 Transporter associated domain C6M09_10135 PF03741 Integral membrane protein TerC family C6M09_10140 PF00563 EAL domain C6M09_10140 PF12792 CSS motif domain associated with EAL C6M09_10145 PF03315 Serine dehydratase beta chain C6M09_10145 PF03313 Serine dehydratase alpha chain C6M09_10150 PF00293 NUDIX domain C6M09_10155 PF04715 Anthranilate synthase component I, N terminal region C6M09_10155 PF00425 chorismate binding enzyme C6M09_10160 PF03701 Uncharacterised protein family (UPF0181) C6M09_10165 PF01042 Endoribonuclease L-PSP C6M09_10170 PF13307 Helicase C-terminal domain C6M09_10170 PF04851 Type III restriction enzyme, res subunit C6M09_10175 PF00814 Glycoprotease family C6M09_10180 PF03843 Outer membrane lipoprotein Slp family C6M09_10185 PF00501 AMP-binding enzyme C6M09_10185 PF13193 AMP-binding enzyme C-terminal domain C6M09_10190 PF00570 HRDC domain C6M09_10190 PF01612 3'-5' exonuclease C6M09_10195 PF03776 Septum formation topological specificity factor MinE C6M09_10200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C6M09_10205 PF03775 Septum formation inhibitor MinC, C-terminal domain C6M09_10205 PF05209 Septum formation inhibitor MinC, N-terminal domain C6M09_10210 PF05166 YcgL domain C6M09_10215 PF01557 Fumarylacetoacetate (FAA) hydrolase family C6M09_10220 PF03692 Putative zinc- or iron-chelating domain C6M09_10230 PF02600 Disulfide bond formation protein DsbB C6M09_10235 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C6M09_10240 PF07840 FadR C-terminal domain C6M09_10240 PF00392 Bacterial regulatory proteins, gntR family C6M09_10245 PF04293 SpoVR like protein C6M09_10255 PF01266 FAD dependent oxidoreductase C6M09_10260 PF01168 Alanine racemase, N-terminal domain C6M09_10260 PF00842 Alanine racemase, C-terminal domain C6M09_10265 PF03471 Transporter associated domain C6M09_10265 PF02080 TrkA-C domain C6M09_10265 PF00999 Sodium/hydrogen exchanger family C6M09_10270 PF02016 LD-carboxypeptidase N-terminal domain C6M09_10270 PF17676 LD-carboxypeptidase C-terminal domain C6M09_10275 PF01464 Transglycosylase SLT domain C6M09_10280 PF00593 TonB dependent receptor C6M09_10280 PF07715 TonB-dependent Receptor Plug Domain C6M09_10285 PF01204 Trehalase C6M09_10295 PF14403 Circularly permuted ATP-grasp type 2 C6M09_10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_10335 PF03466 LysR substrate binding domain C6M09_10340 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_10345 PF03222 Tryptophan/tyrosine permease family C6M09_10350 PF00871 Acetokinase family C6M09_10355 PF01228 Glycine radical C6M09_10355 PF02901 Pyruvate formate lyase-like C6M09_10365 PF13458 Periplasmic binding protein C6M09_10370 PF02653 Branched-chain amino acid transport system / permease component C6M09_10375 PF11862 Domain of unknown function (DUF3382) C6M09_10375 PF02653 Branched-chain amino acid transport system / permease component C6M09_10380 PF12399 Branched-chain amino acid ATP-binding cassette transporter C6M09_10380 PF00005 ABC transporter C6M09_10385 PF00005 ABC transporter C6M09_10390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_10390 PF03466 LysR substrate binding domain C6M09_10395 PF01293 Phosphoenolpyruvate carboxykinase C6M09_10405 PF03466 LysR substrate binding domain C6M09_10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_10410 PF07690 Major Facilitator Superfamily C6M09_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_10420 PF03466 LysR substrate binding domain C6M09_10430 PF00849 RNA pseudouridylate synthase C6M09_10435 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C6M09_10455 PF00691 OmpA family C6M09_10455 PF13488 Glycine zipper C6M09_10465 PF13296 Putative type VI secretion system Rhs element Vgr C6M09_10465 PF04717 Type VI secretion system, phage-baseplate injector C6M09_10465 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C6M09_10590 PF13407 Periplasmic binding protein domain C6M09_10600 PF06071 Protein of unknown function (DUF933) C6M09_10600 PF01926 50S ribosome-binding GTPase C6M09_10605 PF01195 Peptidyl-tRNA hydrolase C6M09_10610 PF10762 Protein of unknown function (DUF2583) C6M09_10620 PF01740 STAS domain C6M09_10620 PF00916 Sulfate permease family C6M09_10625 PF14572 Phosphoribosyl synthetase-associated domain C6M09_10625 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C6M09_10630 PF00288 GHMP kinases N terminal domain C6M09_10630 PF08544 GHMP kinases C terminal C6M09_10635 PF03550 Outer membrane lipoprotein LolB C6M09_10640 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C6M09_10640 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C6M09_10640 PF01488 Shikimate / quinate 5-dehydrogenase C6M09_10645 PF00472 RF-1 domain C6M09_10645 PF03462 PCRF domain C6M09_10650 PF13847 Methyltransferase domain C6M09_10650 PF17827 PrmC N-terminal domain C6M09_10655 PF04247 Invasion gene expression up-regulator, SirB C6M09_10660 PF13369 Transglutaminase-like superfamily C6M09_10665 PF00793 DAHP synthetase I family C6M09_10670 PF01699 Sodium/calcium exchanger protein C6M09_10675 PF06150 ChaB C6M09_10680 PF04752 ChaC-like protein C6M09_10690 PF02635 DsrE/DsrF-like family C6M09_10695 PF03861 ANTAR domain C6M09_10695 PF08376 Nitrate and nitrite sensing C6M09_10705 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_10710 PF00005 ABC transporter C6M09_10715 PF13806 Rieske-like [2Fe-2S] domain C6M09_10715 PF18267 Rubredoxin NAD+ reductase C-terminal domain C6M09_10715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C6M09_10715 PF04324 BFD-like [2Fe-2S] binding domain C6M09_10715 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_10715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C6M09_10720 PF04324 BFD-like [2Fe-2S] binding domain C6M09_10720 PF00384 Molybdopterin oxidoreductase C6M09_10720 PF01568 Molydopterin dinucleotide binding domain C6M09_10720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C6M09_10725 PF11924 Inverse autotransporter, beta-domain C6M09_10730 PF00196 Bacterial regulatory proteins, luxR family C6M09_10730 PF00072 Response regulator receiver domain C6M09_10735 PF00672 HAMP domain C6M09_10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_10735 PF07730 Histidine kinase C6M09_10735 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C6M09_10740 PF07690 Major Facilitator Superfamily C6M09_10750 PF14710 Respiratory nitrate reductase alpha N-terminal C6M09_10750 PF01568 Molydopterin dinucleotide binding domain C6M09_10750 PF00384 Molybdopterin oxidoreductase C6M09_10755 PF14711 Respiratory nitrate reductase beta C-terminal C6M09_10755 PF13247 4Fe-4S dicluster domain C6M09_10760 PF02613 Nitrate reductase delta subunit C6M09_10765 PF02665 Nitrate reductase gamma subunit C6M09_10775 PF01037 Lrp/AsnC ligand binding domain C6M09_10805 PF00551 Formyl transferase C6M09_10805 PF01842 ACT domain C6M09_10810 PF02810 SEC-C motif C6M09_10815 PF01734 Patatin-like phospholipase C6M09_10820 PF00072 Response regulator receiver domain C6M09_10825 PF00483 Nucleotidyl transferase C6M09_10830 PF00816 H-NS histone family C6M09_10840 PF00265 Thymidine kinase C6M09_10845 PF00171 Aldehyde dehydrogenase family C6M09_10845 PF00465 Iron-containing alcohol dehydrogenase C6M09_10855 PF01914 MarC family integral membrane protein C6M09_10860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_10865 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_10870 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_10870 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_10875 PF00005 ABC transporter C6M09_10875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_10880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_10880 PF00005 ABC transporter C6M09_10885 PF00520 Ion transport protein C6M09_10885 PF00027 Cyclic nucleotide-binding domain C6M09_10890 PF04269 Protein of unknown function, DUF440 C6M09_10895 PF13091 PLD-like domain C6M09_10895 PF13396 Phospholipase_D-nuclease N-terminal C6M09_10905 PF04264 YceI-like domain C6M09_10915 PF03795 YCII-related domain C6M09_10920 PF03544 Gram-negative bacterial TonB protein C-terminal C6M09_10925 PF03881 Fructosamine kinase C6M09_10930 PF11080 Endoribonuclease GhoS C6M09_10935 PF00294 pfkB family carbohydrate kinase C6M09_10940 PF04338 Protein of unknown function, DUF481 C6M09_10950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C6M09_10950 PF03129 Anticodon binding domain C6M09_10950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C6M09_10950 PF02824 TGS domain C6M09_10955 PF00707 Translation initiation factor IF-3, C-terminal domain C6M09_10955 PF05198 Translation initiation factor IF-3, N-terminal domain C6M09_10960 PF01632 Ribosomal protein L35 C6M09_10965 PF00453 Ribosomal protein L20 C6M09_10975 PF01409 tRNA synthetases class II core domain (F) C6M09_10975 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C6M09_10980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C6M09_10980 PF03147 Ferredoxin-fold anticodon binding domain C6M09_10980 PF03484 tRNA synthetase B5 domain C6M09_10980 PF03483 B3/4 domain C6M09_10980 PF01588 Putative tRNA binding domain C6M09_10985 PF00216 Bacterial DNA-binding protein C6M09_10995 PF01266 FAD dependent oxidoreductase C6M09_11000 PF03466 LysR substrate binding domain C6M09_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11010 PF01032 FecCD transport family C6M09_11015 PF03180 NLPA lipoprotein C6M09_11020 PF00255 Glutathione peroxidase C6M09_11025 PF00005 ABC transporter C6M09_11030 PF00877 NlpC/P60 family C6M09_11035 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C6M09_11040 PF10636 Hemin uptake protein hemP C6M09_11045 PF00793 DAHP synthetase I family C6M09_11050 PF03618 Kinase/pyrophosphorylase C6M09_11060 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C6M09_11060 PF02896 PEP-utilising enzyme, TIM barrel domain C6M09_11060 PF00391 PEP-utilising enzyme, mobile domain C6M09_11070 PF01594 AI-2E family transporter C6M09_11075 PF02913 FAD linked oxidases, C-terminal domain C6M09_11075 PF13183 4Fe-4S dicluster domain C6M09_11075 PF01565 FAD binding domain C6M09_11080 PF03061 Thioesterase superfamily C6M09_11085 PF04226 Transglycosylase associated protein C6M09_11100 PF08267 Cobalamin-independent synthase, N-terminal domain C6M09_11100 PF01717 Cobalamin-independent synthase, Catalytic domain C6M09_11105 PF07690 Major Facilitator Superfamily C6M09_11110 PF00005 ABC transporter C6M09_11115 PF01032 FecCD transport family C6M09_11125 PF03466 LysR substrate binding domain C6M09_11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11145 PF00873 AcrB/AcrD/AcrF family C6M09_11150 PF01070 FMN-dependent dehydrogenase C6M09_11155 PF00440 Bacterial regulatory proteins, tetR family C6M09_11175 PF01521 Iron-sulphur cluster biosynthesis C6M09_11180 PF01458 Uncharacterized protein family (UPF0051) C6M09_11185 PF00005 ABC transporter C6M09_11190 PF01458 Uncharacterized protein family (UPF0051) C6M09_11195 PF00266 Aminotransferase class-V C6M09_11200 PF02657 Fe-S metabolism associated domain C6M09_11205 PF03734 L,D-transpeptidase catalytic domain C6M09_11205 PF01476 LysM domain C6M09_11205 PF17969 L,D-transpeptidase C-terminal domain C6M09_11210 PF04728 Lipoprotein leucine-zipper C6M09_11215 PF02887 Pyruvate kinase, alpha/beta domain C6M09_11215 PF00224 Pyruvate kinase, barrel domain C6M09_11230 PF10965 Protein of unknown function (DUF2767) C6M09_11235 PF00440 Bacterial regulatory proteins, tetR family C6M09_11235 PF17926 Tetracyclin repressor-like, C-terminal domain C6M09_11240 PF01261 Xylose isomerase-like TIM barrel C6M09_11240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C6M09_11245 PF07690 Major Facilitator Superfamily C6M09_11250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C6M09_11250 PF01488 Shikimate / quinate 5-dehydrogenase C6M09_11250 PF08501 Shikimate dehydrogenase substrate binding domain C6M09_11260 PF00005 ABC transporter C6M09_11265 PF01032 FecCD transport family C6M09_11270 PF01497 Periplasmic binding protein C6M09_11275 PF09339 IclR helix-turn-helix domain C6M09_11275 PF01614 Bacterial transcriptional regulator C6M09_11280 PF01494 FAD binding domain C6M09_11285 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C6M09_11290 PF12697 Alpha/beta hydrolase family C6M09_11295 PF01557 Fumarylacetoacetate (FAA) hydrolase family C6M09_11300 PF01118 Semialdehyde dehydrogenase, NAD binding domain C6M09_11300 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation C6M09_11305 PF00682 HMGL-like C6M09_11305 PF07836 DmpG-like communication domain C6M09_11310 PF07690 Major Facilitator Superfamily C6M09_11315 PF02578 Multi-copper polyphenol oxidoreductase laccase C6M09_11325 PF05995 Cysteine dioxygenase type I C6M09_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11330 PF03466 LysR substrate binding domain C6M09_11335 PF00296 Luciferase-like monooxygenase C6M09_11355 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_11360 PF00005 ABC transporter C6M09_11365 PF07715 TonB-dependent Receptor Plug Domain C6M09_11370 PF00005 ABC transporter C6M09_11375 PF01032 FecCD transport family C6M09_11380 PF01032 FecCD transport family C6M09_11395 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_11400 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_11405 PF00005 ABC transporter C6M09_11420 PF07690 Major Facilitator Superfamily C6M09_11445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C6M09_11445 PF01568 Molydopterin dinucleotide binding domain C6M09_11445 PF00384 Molybdopterin oxidoreductase C6M09_11450 PF02615 Malate/L-lactate dehydrogenase C6M09_11460 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_11465 PF00005 ABC transporter C6M09_11465 PF08402 TOBE domain C6M09_11475 PF13618 Gluconate 2-dehydrogenase subunit 3 C6M09_11480 PF00732 GMC oxidoreductase C6M09_11480 PF05199 GMC oxidoreductase C6M09_11485 PF00034 Cytochrome c C6M09_11485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C6M09_11490 PF00005 ABC transporter C6M09_11495 PF03379 CcmB protein C6M09_11500 PF01578 Cytochrome C assembly protein C6M09_11510 PF03100 CcmE C6M09_11515 PF01578 Cytochrome C assembly protein C6M09_11515 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C6M09_11520 PF08534 Redoxin C6M09_11525 PF03918 Cytochrome C biogenesis protein C6M09_11545 PF03544 Gram-negative bacterial TonB protein C-terminal C6M09_11570 PF05598 Transposase domain (DUF772) C6M09_11570 PF01609 Transposase DDE domain C6M09_11580 PF00873 AcrB/AcrD/AcrF family C6M09_11595 PF00106 short chain dehydrogenase C6M09_11600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_11600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_11600 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_11605 PF03306 Alpha-acetolactate decarboxylase C6M09_11610 PF03466 LysR substrate binding domain C6M09_11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11615 PF00106 short chain dehydrogenase C6M09_11625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C6M09_11625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C6M09_11635 PF01144 Coenzyme A transferase C6M09_11640 PF01144 Coenzyme A transferase C6M09_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11645 PF03466 LysR substrate binding domain C6M09_11670 PF01565 FAD binding domain C6M09_11670 PF02913 FAD linked oxidases, C-terminal domain C6M09_11675 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_11680 PF00005 ABC transporter C6M09_11690 PF02633 Creatinine amidohydrolase C6M09_11695 PF01042 Endoribonuclease L-PSP C6M09_11700 PF07969 Amidohydrolase family C6M09_11705 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_11710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11710 PF03466 LysR substrate binding domain C6M09_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11745 PF03466 LysR substrate binding domain C6M09_11750 PF16197 Ketoacyl-synthetase C-terminal extension C6M09_11750 PF00109 Beta-ketoacyl synthase, N-terminal domain C6M09_11750 PF00550 Phosphopantetheine attachment site C6M09_11750 PF02801 Beta-ketoacyl synthase, C-terminal domain C6M09_11750 PF08659 KR domain C6M09_11750 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_11750 PF00698 Acyl transferase domain C6M09_11750 PF14765 Polyketide synthase dehydratase C6M09_11755 PF03466 LysR substrate binding domain C6M09_11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11760 PF07690 Major Facilitator Superfamily C6M09_11780 PF00005 ABC transporter C6M09_11780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_11785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_11785 PF00005 ABC transporter C6M09_11790 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_11795 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_11800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_11810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C6M09_11815 PF08220 DeoR-like helix-turn-helix domain C6M09_11815 PF00455 DeoR C terminal sensor domain C6M09_11825 PF00484 Carbonic anhydrase C6M09_11850 PF00753 Metallo-beta-lactamase superfamily C6M09_11850 PF10996 Beta-Casp domain C6M09_11850 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C6M09_11860 PF03466 LysR substrate binding domain C6M09_11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11885 PF03641 Possible lysine decarboxylase C6M09_11895 PF01554 MatE C6M09_11900 PF00677 Lumazine binding domain C6M09_11910 PF07690 Major Facilitator Superfamily C6M09_11915 PF03466 LysR substrate binding domain C6M09_11915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_11920 PF00356 Bacterial regulatory proteins, lacI family C6M09_11930 PF07690 Major Facilitator Superfamily C6M09_11935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C6M09_11935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C6M09_11945 PF00877 NlpC/P60 family C6M09_11950 PF00462 Glutaredoxin C6M09_11955 PF00929 Exonuclease C6M09_11960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C6M09_11965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C6M09_11970 PF16925 Tetracyclin repressor-like, C-terminal domain C6M09_11970 PF00440 Bacterial regulatory proteins, tetR family C6M09_11975 PF06945 Protein of unknown function (DUF1289) C6M09_11980 PF00248 Aldo/keto reductase family C6M09_11985 PF00080 Copper/zinc superoxide dismutase (SODC) C6M09_11990 PF04632 Fusaric acid resistance protein family C6M09_11995 PF00529 HlyD membrane-fusion protein of T1SS C6M09_11995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_12000 PF07869 Protein of unknown function (DUF1656) C6M09_12005 PF01047 MarR family C6M09_12010 PF17158 Membrane-associated sensor, integral membrane domain C6M09_12010 PF00990 Diguanylate cyclase, GGDEF domain C6M09_12015 PF05433 Glycine zipper 2TM domain C6M09_12020 PF03702 Anhydro-N-acetylmuramic acid kinase C6M09_12025 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme C6M09_12030 PF01243 Pyridoxamine 5'-phosphate oxidase C6M09_12030 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C6M09_12035 PF00579 tRNA synthetases class I (W and Y) C6M09_12040 PF08543 Phosphomethylpyrimidine kinase C6M09_12045 PF00043 Glutathione S-transferase, C-terminal domain C6M09_12045 PF02798 Glutathione S-transferase, N-terminal domain C6M09_12050 PF00854 POT family C6M09_12055 PF10576 Iron-sulfur binding domain of endonuclease III C6M09_12055 PF00730 HhH-GPD superfamily base excision DNA repair protein C6M09_12055 PF00633 Helix-hairpin-helix motif C6M09_12060 PF02508 Rnf-Nqr subunit, membrane protein C6M09_12065 PF04205 FMN-binding domain C6M09_12070 PF03116 NQR2, RnfD, RnfE family C6M09_12075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C6M09_12075 PF12838 4Fe-4S dicluster domain C6M09_12075 PF13375 RnfC Barrel sandwich hybrid domain C6M09_12075 PF10531 SLBB domain C6M09_12080 PF04060 Putative Fe-S cluster C6M09_12085 PF02508 Rnf-Nqr subunit, membrane protein C6M09_12090 PF10754 Protein of unknown function (DUF2569) C6M09_12095 PF05321 Haemolysin expression modulating protein C6M09_12100 PF00232 Glycosyl hydrolase family 1 C6M09_12110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_12110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_12115 PF00962 Adenosine/AMP deaminase C6M09_12120 PF07690 Major Facilitator Superfamily C6M09_12125 PF01638 HxlR-like helix-turn-helix C6M09_12140 PF01292 Prokaryotic cytochrome b561 C6M09_12145 PF02583 Metal-sensitive transcriptional repressor C6M09_12150 PF00107 Zinc-binding dehydrogenase C6M09_12150 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_12155 PF01011 PQQ enzyme repeat C6M09_12160 PF03466 LysR substrate binding domain C6M09_12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_12165 PF00775 Dioxygenase C6M09_12170 PF00775 Dioxygenase C6M09_12170 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C6M09_12175 PF07063 Domain of unknown function (DUF1338) C6M09_12180 PF00135 Carboxylesterase family C6M09_12185 PF00107 Zinc-binding dehydrogenase C6M09_12185 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_12190 PF04349 Periplasmic glucan biosynthesis protein, MdoG C6M09_12195 PF13302 Acetyltransferase (GNAT) domain C6M09_12200 PF18836 Beta solenoid repeat from YDCK C6M09_12205 PF03595 Voltage-dependent anion channel C6M09_12210 PF03848 Tellurite resistance protein TehB C6M09_12215 PF11769 Protein of unknown function (DUF3313) C6M09_12220 PF00892 EamA-like transporter family C6M09_12225 PF06445 GyrI-like small molecule binding domain C6M09_12225 PF12833 Helix-turn-helix domain C6M09_12230 PF03594 Benzoate membrane transport protein C6M09_12235 PF07883 Cupin domain C6M09_12235 PF01381 Helix-turn-helix C6M09_12245 PF01136 Peptidase family U32 C6M09_12245 PF12392 Collagenase C6M09_12265 PF02322 Cytochrome bd terminal oxidase subunit II C6M09_12270 PF01654 Cytochrome bd terminal oxidase subunit I C6M09_12275 PF00392 Bacterial regulatory proteins, gntR family C6M09_12275 PF00155 Aminotransferase class I and II C6M09_12280 PF13416 Bacterial extracellular solute-binding protein C6M09_12285 PF00005 ABC transporter C6M09_12285 PF08402 TOBE domain C6M09_12290 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_12295 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_12300 PF00171 Aldehyde dehydrogenase family C6M09_12325 PF10753 Toxin GhoT_OrtT C6M09_12330 PF00364 Biotin-requiring enzyme C6M09_12330 PF00561 alpha/beta hydrolase fold C6M09_12335 PF00171 Aldehyde dehydrogenase family C6M09_12340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_12345 PF10735 Protein of unknown function (DUF2526) C6M09_12350 PF04657 Putative inner membrane exporter, YdcZ C6M09_12355 PF00583 Acetyltransferase (GNAT) family C6M09_12360 PF08671 Anti-repressor SinI C6M09_12360 PF01381 Helix-turn-helix C6M09_12365 PF00107 Zinc-binding dehydrogenase C6M09_12365 PF16884 N-terminal domain of oxidoreductase C6M09_12370 PF01156 Inosine-uridine preferring nucleoside hydrolase C6M09_12380 PF04175 Protein of unknown function (DUF406) C6M09_12385 PF01979 Amidohydrolase family C6M09_12390 PF00593 TonB dependent receptor C6M09_12390 PF07715 TonB-dependent Receptor Plug Domain C6M09_12405 PF00324 Amino acid permease C6M09_12415 PF01202 Shikimate kinase C6M09_12420 PF00296 Luciferase-like monooxygenase C6M09_12425 PF01546 Peptidase family M20/M25/M40 C6M09_12425 PF07687 Peptidase dimerisation domain C6M09_12430 PF00296 Luciferase-like monooxygenase C6M09_12435 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_12445 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_12450 PF00005 ABC transporter C6M09_12460 PF13417 Glutathione S-transferase, N-terminal domain C6M09_12465 PF01361 Tautomerase enzyme C6M09_12475 PF02264 LamB porin C6M09_12475 PF11471 Maltoporin periplasmic N-terminal extension C6M09_12490 PF12833 Helix-turn-helix domain C6M09_12490 PF02311 AraC-like ligand binding domain C6M09_12495 PF01613 Flavin reductase like domain C6M09_12500 PF17912 MalK OB fold domain C6M09_12500 PF00005 ABC transporter C6M09_12510 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_12515 PF00797 N-acetyltransferase C6M09_12520 PF02665 Nitrate reductase gamma subunit C6M09_12525 PF02613 Nitrate reductase delta subunit C6M09_12530 PF13247 4Fe-4S dicluster domain C6M09_12530 PF14711 Respiratory nitrate reductase beta C-terminal C6M09_12535 PF14710 Respiratory nitrate reductase alpha N-terminal C6M09_12535 PF01568 Molydopterin dinucleotide binding domain C6M09_12535 PF00384 Molybdopterin oxidoreductase C6M09_12540 PF07690 Major Facilitator Superfamily C6M09_12550 PF07690 Major Facilitator Superfamily C6M09_12555 PF09339 IclR helix-turn-helix domain C6M09_12555 PF01614 Bacterial transcriptional regulator C6M09_12560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C6M09_12560 PF13378 Enolase C-terminal domain-like C6M09_12565 PF02426 Muconolactone delta-isomerase C6M09_12570 PF00775 Dioxygenase C6M09_12570 PF04444 Catechol dioxygenase N terminus C6M09_12575 PF00355 Rieske [2Fe-2S] domain C6M09_12575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C6M09_12580 PF00866 Ring hydroxylating beta subunit C6M09_12585 PF00970 Oxidoreductase FAD-binding domain C6M09_12585 PF00175 Oxidoreductase NAD-binding domain C6M09_12585 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_12590 PF00106 short chain dehydrogenase C6M09_12595 PF00892 EamA-like transporter family C6M09_12605 PF12800 4Fe-4S binding domain C6M09_12605 PF09163 Formate dehydrogenase N, transmembrane C6M09_12605 PF13247 4Fe-4S dicluster domain C6M09_12610 PF01292 Prokaryotic cytochrome b561 C6M09_12625 PF03976 Polyphosphate kinase 2 (PPK2) C6M09_12635 PF07690 Major Facilitator Superfamily C6M09_12645 PF00296 Luciferase-like monooxygenase C6M09_12650 PF00005 ABC transporter C6M09_12650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_12655 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_12655 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_12660 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_12665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_12670 PF00107 Zinc-binding dehydrogenase C6M09_12670 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_12675 PF00719 Inorganic pyrophosphatase C6M09_12685 PF12848 ABC transporter C6M09_12685 PF00005 ABC transporter C6M09_12700 PF03949 Malic enzyme, NAD binding domain C6M09_12700 PF00390 Malic enzyme, N-terminal domain C6M09_12710 PF08136 30S ribosomal protein subunit S22 family C6M09_12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_12720 PF03466 LysR substrate binding domain C6M09_12725 PF10820 Protein of unknown function (DUF2543) C6M09_12735 PF10685 Stress-induced bacterial acidophilic repeat motif C6M09_12745 PF05974 Domain of unknown function (DUF892) C6M09_12755 PF00128 Alpha amylase, catalytic domain C6M09_12755 PF16657 Maltogenic Amylase, C-terminal domain C6M09_12760 PF00106 short chain dehydrogenase C6M09_12765 PF04239 Protein of unknown function (DUF421) C6M09_12775 PF04076 Bacterial OB fold (BOF) protein C6M09_12785 PF02566 OsmC-like protein C6M09_12805 PF16916 Dimerisation domain of Zinc Transporter C6M09_12805 PF01545 Cation efflux family C6M09_12810 PF01062 Bestrophin, RFP-TM, chloride channel C6M09_12815 PF00384 Molybdopterin oxidoreductase C6M09_12820 PF03466 LysR substrate binding domain C6M09_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_12825 PF02378 Phosphotransferase system, EIIC C6M09_12850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_12855 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C6M09_12860 PF00083 Sugar (and other) transporter C6M09_12865 PF02308 MgtC family C6M09_12870 PF03969 AFG1-like ATPase C6M09_12875 PF00141 Peroxidase C6M09_12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_12880 PF03466 LysR substrate binding domain C6M09_12895 PF03717 Penicillin-binding Protein dimerisation domain C6M09_12895 PF00905 Penicillin binding protein transpeptidase domain C6M09_12900 PF00117 Glutamine amidotransferase class-I C6M09_12900 PF00958 GMP synthase C terminal domain C6M09_12900 PF02540 NAD synthase C6M09_12905 PF00675 Insulinase (Peptidase family M16) C6M09_12910 PF04055 Radical SAM superfamily C6M09_12910 PF13186 Iron-sulfur cluster-binding domain C6M09_12915 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C6M09_12920 PF03070 TENA/THI-4/PQQC family C6M09_12925 PF12706 Beta-lactamase superfamily domain C6M09_12930 PF08042 PqqA family C6M09_12935 PF01244 Membrane dipeptidase (Peptidase family M19) C6M09_12940 PF00561 alpha/beta hydrolase fold C6M09_12945 PF00072 Response regulator receiver domain C6M09_12945 PF00486 Transcriptional regulatory protein, C terminal C6M09_12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_12950 PF00672 HAMP domain C6M09_12950 PF00512 His Kinase A (phospho-acceptor) domain C6M09_12955 PF02683 Cytochrome C biogenesis protein transmembrane region C6M09_12955 PF00578 AhpC/TSA family C6M09_12955 PF17991 Thioredoxin like C-terminal domain C6M09_12965 PF00282 Pyridoxal-dependent decarboxylase conserved domain C6M09_12970 PF00202 Aminotransferase class-III C6M09_12975 PF09084 NMT1/THI5 like C6M09_12980 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_12985 PF00005 ABC transporter C6M09_12990 PF03070 TENA/THI-4/PQQC family C6M09_13005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_13005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_13015 PF00356 Bacterial regulatory proteins, lacI family C6M09_13020 PF08448 PAS fold C6M09_13020 PF00990 Diguanylate cyclase, GGDEF domain C6M09_13025 PF01979 Amidohydrolase family C6M09_13030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C6M09_13070 PF00300 Histidine phosphatase superfamily (branch 1) C6M09_13075 PF00857 Isochorismatase family C6M09_13080 PF00106 short chain dehydrogenase C6M09_13085 PF00117 Glutamine amidotransferase class-I C6M09_13105 PF00109 Beta-ketoacyl synthase, N-terminal domain C6M09_13105 PF02801 Beta-ketoacyl synthase, C-terminal domain C6M09_13110 PF07690 Major Facilitator Superfamily C6M09_13130 PF02774 Semialdehyde dehydrogenase, dimerisation domain C6M09_13130 PF01118 Semialdehyde dehydrogenase, NAD binding domain C6M09_13145 PF01425 Amidase C6M09_13170 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_13175 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_13180 PF00005 ABC transporter C6M09_13185 PF00266 Aminotransferase class-V C6M09_13190 PF07687 Peptidase dimerisation domain C6M09_13190 PF01546 Peptidase family M20/M25/M40 C6M09_13195 PF03060 Nitronate monooxygenase C6M09_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13200 PF03466 LysR substrate binding domain C6M09_13210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C6M09_13215 PF13454 FAD-NAD(P)-binding C6M09_13220 PF07690 Major Facilitator Superfamily C6M09_13220 PF00083 Sugar (and other) transporter C6M09_13235 PF00440 Bacterial regulatory proteins, tetR family C6M09_13250 PF07690 Major Facilitator Superfamily C6M09_13260 PF00356 Bacterial regulatory proteins, lacI family C6M09_13265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_13275 PF03611 PTS system sugar-specific permease component C6M09_13280 PF00834 Ribulose-phosphate 3 epimerase family C6M09_13290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_13295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_13295 PF02378 Phosphotransferase system, EIIC C6M09_13300 PF01810 LysE type translocator C6M09_13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13310 PF03466 LysR substrate binding domain C6M09_13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13315 PF03466 LysR substrate binding domain C6M09_13320 PF00753 Metallo-beta-lactamase superfamily C6M09_13330 PF01546 Peptidase family M20/M25/M40 C6M09_13330 PF07687 Peptidase dimerisation domain C6M09_13340 PF02126 Phosphotriesterase family C6M09_13345 PF02653 Branched-chain amino acid transport system / permease component C6M09_13350 PF00005 ABC transporter C6M09_13355 PF00356 Bacterial regulatory proteins, lacI family C6M09_13365 PF00294 pfkB family carbohydrate kinase C6M09_13385 PF04972 BON domain C6M09_13385 PF01476 LysM domain C6M09_13400 PF00258 Flavodoxin C6M09_13400 PF01613 Flavin reductase like domain C6M09_13415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_13415 PF00512 His Kinase A (phospho-acceptor) domain C6M09_13415 PF00672 HAMP domain C6M09_13420 PF14532 Sigma-54 interaction domain C6M09_13420 PF00072 Response regulator receiver domain C6M09_13420 PF02954 Bacterial regulatory protein, Fis family C6M09_13425 PF13673 Acetyltransferase (GNAT) domain C6M09_13425 PF04229 GrpB protein C6M09_13430 PF03466 LysR substrate binding domain C6M09_13430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13435 PF00248 Aldo/keto reductase family C6M09_13440 PF00248 Aldo/keto reductase family C6M09_13460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C6M09_13460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C6M09_13465 PF12833 Helix-turn-helix domain C6M09_13465 PF01965 DJ-1/PfpI family C6M09_13475 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C6M09_13490 PF00455 DeoR C terminal sensor domain C6M09_13490 PF08220 DeoR-like helix-turn-helix domain C6M09_13495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_13495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_13500 PF01791 DeoC/LacD family aldolase C6M09_13505 PF08220 DeoR-like helix-turn-helix domain C6M09_13505 PF00455 DeoR C terminal sensor domain C6M09_13510 PF00834 Ribulose-phosphate 3 epimerase family C6M09_13515 PF00294 pfkB family carbohydrate kinase C6M09_13520 PF07690 Major Facilitator Superfamily C6M09_13530 PF00501 AMP-binding enzyme C6M09_13530 PF13193 AMP-binding enzyme C-terminal domain C6M09_13535 PF01144 Coenzyme A transferase C6M09_13545 PF00108 Thiolase, N-terminal domain C6M09_13545 PF02803 Thiolase, C-terminal domain C6M09_13550 PF07690 Major Facilitator Superfamily C6M09_13555 PF08450 SMP-30/Gluconolactonase/LRE-like region C6M09_13565 PF02595 Glycerate kinase family C6M09_13570 PF13556 PucR C-terminal helix-turn-helix domain C6M09_13570 PF17853 GGDEF-like domain C6M09_13570 PF05651 Putative sugar diacid recognition C6M09_13575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C6M09_13575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C6M09_13580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13580 PF03466 LysR substrate binding domain C6M09_13590 PF00392 Bacterial regulatory proteins, gntR family C6M09_13590 PF07729 FCD domain C6M09_13595 PF02378 Phosphotransferase system, EIIC C6M09_13595 PF00367 phosphotransferase system, EIIB C6M09_13600 PF11975 Family 4 glycosyl hydrolase C-terminal domain C6M09_13600 PF02056 Family 4 glycosyl hydrolase C6M09_13605 PF00083 Sugar (and other) transporter C6M09_13610 PF00381 PTS HPr component phosphorylation site C6M09_13610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_13625 PF00756 Putative esterase C6M09_13630 PF13188 PAS domain C6M09_13630 PF03707 Bacterial signalling protein N terminal repeat C6M09_13630 PF00990 Diguanylate cyclase, GGDEF domain C6M09_13630 PF00563 EAL domain C6M09_13645 PF00557 Metallopeptidase family M24 C6M09_13660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_13660 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_13665 PF00577 Outer membrane usher protein C6M09_13665 PF13954 PapC N-terminal domain C6M09_13665 PF13953 PapC C-terminal domain C6M09_13675 PF02638 Glycosyl hydrolase-like 10 C6M09_13680 PF07804 HipA-like C-terminal domain C6M09_13680 PF13657 HipA N-terminal domain C6M09_13685 PF01381 Helix-turn-helix C6M09_13690 PF00576 HIUase/Transthyretin family C6M09_13695 PF09349 OHCU decarboxylase C6M09_13695 PF01014 Uricase C6M09_13700 PF00860 Permease family C6M09_13705 PF01494 FAD binding domain C6M09_13710 PF03466 LysR substrate binding domain C6M09_13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13715 PF00355 Rieske [2Fe-2S] domain C6M09_13720 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_13725 PF07690 Major Facilitator Superfamily C6M09_13730 PF12833 Helix-turn-helix domain C6M09_13745 PF09905 DNA-binding protein VF530 C6M09_13755 PF03180 NLPA lipoprotein C6M09_13760 PF00005 ABC transporter C6M09_13760 PF09383 NIL domain C6M09_13765 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_13770 PF03060 Nitronate monooxygenase C6M09_13775 PF03466 LysR substrate binding domain C6M09_13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13780 PF06779 Uncharacterised MFS-type transporter YbfB C6M09_13790 PF07690 Major Facilitator Superfamily C6M09_13800 PF13649 Methyltransferase domain C6M09_13835 PF00583 Acetyltransferase (GNAT) family C6M09_13840 PF08125 Mannitol dehydrogenase C-terminal domain C6M09_13840 PF01232 Mannitol dehydrogenase Rossmann domain C6M09_13850 PF00990 Diguanylate cyclase, GGDEF domain C6M09_13855 PF13811 Domain of unknown function (DUF4186) C6M09_13860 PF04960 Glutaminase C6M09_13865 PF00171 Aldehyde dehydrogenase family C6M09_13870 PF03466 LysR substrate binding domain C6M09_13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_13875 PF00583 Acetyltransferase (GNAT) family C6M09_13880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C6M09_13880 PF00056 lactate/malate dehydrogenase, NAD binding domain C6M09_13885 PF00455 DeoR C terminal sensor domain C6M09_13885 PF08220 DeoR-like helix-turn-helix domain C6M09_13890 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C6M09_13895 PF17042 Nucleotide-binding C-terminal domain C6M09_13895 PF07005 Sugar-binding N-terminal domain C6M09_13900 PF00465 Iron-containing alcohol dehydrogenase C6M09_13905 PF00701 Dihydrodipicolinate synthetase family C6M09_13920 PF04074 YhcH/YjgK/YiaL C6M09_13930 PF02567 Phenazine biosynthesis-like protein C6M09_13935 PF07690 Major Facilitator Superfamily C6M09_13940 PF01914 MarC family integral membrane protein C6M09_13950 PF01047 MarR family C6M09_13955 PF12833 Helix-turn-helix domain C6M09_13960 PF13999 MarB protein C6M09_13965 PF00892 EamA-like transporter family C6M09_13970 PF07690 Major Facilitator Superfamily C6M09_13980 PF00005 ABC transporter C6M09_13985 PF00005 ABC transporter C6M09_13990 PF02653 Branched-chain amino acid transport system / permease component C6M09_13995 PF02653 Branched-chain amino acid transport system / permease component C6M09_14000 PF13458 Periplasmic binding protein C6M09_14005 PF01717 Cobalamin-independent synthase, Catalytic domain C6M09_14015 PF01965 DJ-1/PfpI family C6M09_14015 PF12833 Helix-turn-helix domain C6M09_14030 PF00356 Bacterial regulatory proteins, lacI family C6M09_14035 PF16353 Domain of unknown function(DUF4981) C6M09_14035 PF00703 Glycosyl hydrolases family 2 C6M09_14035 PF02837 Glycosyl hydrolases family 2, sugar binding domain C6M09_14035 PF02929 Beta galactosidase small chain C6M09_14035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C6M09_14040 PF01306 LacY proton/sugar symporter C6M09_14045 PF02463 RecF/RecN/SMC N terminal domain C6M09_14060 PF00455 DeoR C terminal sensor domain C6M09_14060 PF08220 DeoR-like helix-turn-helix domain C6M09_14065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C6M09_14065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C6M09_14070 PF17042 Nucleotide-binding C-terminal domain C6M09_14070 PF07005 Sugar-binding N-terminal domain C6M09_14075 PF00596 Class II Aldolase and Adducin N-terminal domain C6M09_14080 PF01261 Xylose isomerase-like TIM barrel C6M09_14085 PF02447 GntP family permease C6M09_14090 PF12833 Helix-turn-helix domain C6M09_14095 PF05598 Transposase domain (DUF772) C6M09_14095 PF01609 Transposase DDE domain C6M09_14110 PF04940 Sensors of blue-light using FAD C6M09_14110 PF00563 EAL domain C6M09_14115 PF02464 Competence-damaged protein C6M09_14120 PF00011 Hsp20/alpha crystallin family C6M09_14150 PF02586 SOS response associated peptidase (SRAP) C6M09_14155 PF12833 Helix-turn-helix domain C6M09_14155 PF02311 AraC-like ligand binding domain C6M09_14165 PF01432 Peptidase family M3 C6M09_14170 PF00106 short chain dehydrogenase C6M09_14175 PF07729 FCD domain C6M09_14175 PF00392 Bacterial regulatory proteins, gntR family C6M09_14180 PF00582 Universal stress protein family C6M09_14200 PF00480 ROK family C6M09_14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_14205 PF03466 LysR substrate binding domain C6M09_14210 PF07690 Major Facilitator Superfamily C6M09_14215 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C6M09_14225 PF00089 Trypsin C6M09_14235 PF00893 Small Multidrug Resistance protein C6M09_14240 PF00893 Small Multidrug Resistance protein C6M09_14245 PF01594 AI-2E family transporter C6M09_14250 PF16957 Malonate decarboxylase, alpha subunit, transporter C6M09_14255 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C6M09_14260 PF06857 Malonate decarboxylase delta subunit (MdcD) C6M09_14265 PF01039 Carboxyl transferase domain C6M09_14275 PF03547 Membrane transport protein C6M09_14280 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C6M09_14285 PF00698 Acyl transferase domain C6M09_14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_14290 PF03466 LysR substrate binding domain C6M09_14295 PF06039 Malate:quinone oxidoreductase (Mqo) C6M09_14300 PF13580 SIS domain C6M09_14310 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C6M09_14310 PF00989 PAS fold C6M09_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_14310 PF17203 Single cache domain 3 C6M09_14315 PF00072 Response regulator receiver domain C6M09_14320 PF02424 ApbE family C6M09_14325 PF00890 FAD binding domain C6M09_14325 PF14537 Cytochrome c3 C6M09_14330 PF00939 Sodium:sulfate symporter transmembrane region C6M09_14335 PF05681 Fumarate hydratase (Fumerase) C6M09_14335 PF05683 Fumarase C-terminus C6M09_14345 PF02627 Carboxymuconolactone decarboxylase family C6M09_14350 PF12146 Serine aminopeptidase, S33 C6M09_14355 PF00206 Lyase C6M09_14355 PF10397 Adenylosuccinate lyase C-terminus C6M09_14360 PF00108 Thiolase, N-terminal domain C6M09_14360 PF02803 Thiolase, C-terminal domain C6M09_14365 PF01144 Coenzyme A transferase C6M09_14370 PF01144 Coenzyme A transferase C6M09_14375 PF09339 IclR helix-turn-helix domain C6M09_14375 PF01614 Bacterial transcriptional regulator C6M09_14380 PF01713 Smr domain C6M09_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_14385 PF03466 LysR substrate binding domain C6M09_14390 PF07687 Peptidase dimerisation domain C6M09_14390 PF01546 Peptidase family M20/M25/M40 C6M09_14395 PF01546 Peptidase family M20/M25/M40 C6M09_14400 PF03806 AbgT putative transporter family C6M09_14410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C6M09_14410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C6M09_14415 PF00325 Bacterial regulatory proteins, crp family C6M09_14415 PF00027 Cyclic nucleotide-binding domain C6M09_14420 PF00582 Universal stress protein family C6M09_14425 PF15930 Domain of unknown function C6M09_14430 PF02233 NAD(P) transhydrogenase beta subunit C6M09_14435 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C6M09_14435 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C6M09_14435 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C6M09_14445 PF07338 Protein of unknown function (DUF1471) C6M09_14450 PF13520 Amino acid permease C6M09_14460 PF06942 GlpM protein C6M09_14465 PF00486 Transcriptional regulatory protein, C terminal C6M09_14465 PF00072 Response regulator receiver domain C6M09_14475 PF00672 HAMP domain C6M09_14475 PF00512 His Kinase A (phospho-acceptor) domain C6M09_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_14480 PF05472 DNA replication terminus site-binding protein (Ter protein) C6M09_14485 PF00206 Lyase C6M09_14485 PF10415 Fumarase C C-terminus C6M09_14490 PF05681 Fumarate hydratase (Fumerase) C6M09_14490 PF05683 Fumarase C-terminus C6M09_14495 PF01238 Phosphomannose isomerase type I C6M09_14500 PF06097 Bacterial protein of unknown function (DUF945) C6M09_14505 PF00356 Bacterial regulatory proteins, lacI family C6M09_14505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C6M09_14510 PF00367 phosphotransferase system, EIIB C6M09_14510 PF02378 Phosphotransferase system, EIIC C6M09_14515 PF00155 Aminotransferase class I and II C6M09_14525 PF14001 YdfZ protein C6M09_14540 PF04143 Sulphur transport C6M09_14545 PF01206 Sulfurtransferase TusA C6M09_14550 PF07166 Protein of unknown function (DUF1398) C6M09_14555 PF01679 Proteolipid membrane potential modulator C6M09_14560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C6M09_14560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C6M09_14565 PF00171 Aldehyde dehydrogenase family C6M09_14575 PF02698 DUF218 domain C6M09_14580 PF00083 Sugar (and other) transporter C6M09_14580 PF07690 Major Facilitator Superfamily C6M09_14585 PF00324 Amino acid permease C6M09_14590 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C6M09_14595 PF04996 Succinylarginine dihydrolase C6M09_14600 PF00171 Aldehyde dehydrogenase family C6M09_14605 PF04958 Arginine N-succinyltransferase beta subunit C6M09_14610 PF00202 Aminotransferase class-III C6M09_14620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C6M09_14620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C6M09_14625 PF00248 Aldo/keto reductase family C6M09_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_14630 PF03466 LysR substrate binding domain C6M09_14645 PF13533 Biotin-lipoyl like C6M09_14650 PF02321 Outer membrane efflux protein C6M09_14655 PF01596 O-methyltransferase C6M09_14660 PF00271 Helicase conserved C-terminal domain C6M09_14660 PF04408 Helicase associated domain (HA2) C6M09_14660 PF11898 Domain of unknown function (DUF3418) C6M09_14660 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C6M09_14660 PF00270 DEAD/DEAH box helicase C6M09_14665 PF02525 Flavodoxin-like fold C6M09_14675 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_14680 PF08223 PaaX-like protein C-terminal domain C6M09_14680 PF07848 PaaX-like protein C6M09_14685 PF00501 AMP-binding enzyme C6M09_14685 PF14535 AMP-binding enzyme C-terminal domain C6M09_14690 PF02803 Thiolase, C-terminal domain C6M09_14690 PF00108 Thiolase, N-terminal domain C6M09_14695 PF03061 Thioesterase superfamily C6M09_14700 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain C6M09_14700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C6M09_14700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C6M09_14705 PF00378 Enoyl-CoA hydratase/isomerase C6M09_14710 PF00378 Enoyl-CoA hydratase/isomerase C6M09_14715 PF00970 Oxidoreductase FAD-binding domain C6M09_14715 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_14715 PF00175 Oxidoreductase NAD-binding domain C6M09_14720 PF01883 Iron-sulfur cluster assembly protein C6M09_14725 PF05138 Phenylacetic acid catabolic protein C6M09_14730 PF06243 Phenylacetic acid degradation B C6M09_14735 PF05138 Phenylacetic acid catabolic protein C6M09_14740 PF01575 MaoC like domain C6M09_14740 PF00171 Aldehyde dehydrogenase family C6M09_14745 PF07833 Copper amine oxidase N-terminal domain C6M09_14745 PF02728 Copper amine oxidase, N3 domain C6M09_14745 PF01179 Copper amine oxidase, enzyme domain C6M09_14745 PF02727 Copper amine oxidase, N2 domain C6M09_14755 PF02558 Ketopantoate reductase PanE/ApbA C6M09_14755 PF08546 Ketopantoate reductase PanE/ApbA C terminal C6M09_14760 PF00171 Aldehyde dehydrogenase family C6M09_14765 PF12833 Helix-turn-helix domain C6M09_14765 PF14525 AraC-binding-like domain C6M09_14770 PF07027 Protein of unknown function (DUF1318) C6M09_14775 PF13617 YnbE-like lipoprotein C6M09_14780 PF11739 Dicarboxylate transport C6M09_14785 PF09335 SNARE associated Golgi protein C6M09_14790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_14790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6M09_14795 PF03724 META domain C6M09_14800 PF03891 Domain of unknown function (DUF333) C6M09_14805 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C6M09_14805 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C6M09_14805 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C6M09_14805 PF10371 Domain of unknown function C6M09_14805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_14810 PF00267 Gram-negative porin C6M09_14820 PF00582 Universal stress protein family C6M09_14825 PF01171 PP-loop family C6M09_14830 PF03880 DbpA RNA binding domain C6M09_14830 PF00270 DEAD/DEAH box helicase C6M09_14830 PF00271 Helicase conserved C-terminal domain C6M09_14835 PF01544 CorA-like Mg2+ transporter protein C6M09_14840 PF08220 DeoR-like helix-turn-helix domain C6M09_14840 PF00455 DeoR C terminal sensor domain C6M09_14845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_14845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_14860 PF00324 Amino acid permease C6M09_14865 PF01037 Lrp/AsnC ligand binding domain C6M09_14875 PF00155 Aminotransferase class I and II C6M09_14880 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_14885 PF00005 ABC transporter C6M09_14885 PF09383 NIL domain C6M09_14890 PF03180 NLPA lipoprotein C6M09_14895 PF00155 Aminotransferase class I and II C6M09_14900 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_14900 PF00107 Zinc-binding dehydrogenase C6M09_14905 PF00440 Bacterial regulatory proteins, tetR family C6M09_14915 PF00753 Metallo-beta-lactamase superfamily C6M09_14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_14930 PF03466 LysR substrate binding domain C6M09_14955 PF00440 Bacterial regulatory proteins, tetR family C6M09_15040 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C6M09_15040 PF04717 Type VI secretion system, phage-baseplate injector C6M09_15040 PF13296 Putative type VI secretion system Rhs element Vgr C6M09_15045 PF17871 AAA lid domain C6M09_15045 PF10431 C-terminal, D2-small domain, of ClpB protein C6M09_15045 PF00004 ATPase family associated with various cellular activities (AAA) C6M09_15045 PF07724 AAA domain (Cdc48 subfamily) C6M09_15055 PF13488 Glycine zipper C6M09_15055 PF00691 OmpA family C6M09_15070 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C6M09_15080 PF01609 Transposase DDE domain C6M09_15080 PF05598 Transposase domain (DUF772) C6M09_15085 PF06183 DinI-like family C6M09_15175 PF01551 Peptidase family M23 C6M09_15175 PF10145 Phage-related minor tail protein C6M09_15175 PF01464 Transglycosylase SLT domain C6M09_15245 PF06381 Protein of unknown function (DUF1073) C6M09_15250 PF04466 Phage terminase large subunit C6M09_15250 PF17288 Terminase RNAseH like domain C6M09_15270 PF00959 Phage lysozyme C6M09_15280 PF03589 Antitermination protein C6M09_15305 PF00717 Peptidase S24-like C6M09_15305 PF01381 Helix-turn-helix C6M09_15385 PF13356 Arm DNA-binding domain C6M09_15385 PF14659 Phage integrase, N-terminal SAM-like domain C6M09_15385 PF00589 Phage integrase family C6M09_15390 PF01965 DJ-1/PfpI family C6M09_15395 PF01966 HD domain C6M09_15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_15405 PF03466 LysR substrate binding domain C6M09_15420 PF00248 Aldo/keto reductase family C6M09_15425 PF07690 Major Facilitator Superfamily C6M09_15430 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C6M09_15435 PF03466 LysR substrate binding domain C6M09_15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_15450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_15460 PF00246 Zinc carboxypeptidase C6M09_15465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C6M09_15465 PF13378 Enolase C-terminal domain-like C6M09_15470 PF08534 Redoxin C6M09_15475 PF05145 Transition state regulatory protein AbrB C6M09_15480 PF00158 Sigma-54 interaction domain C6M09_15480 PF18024 Helix-turn-helix domain C6M09_15485 PF02056 Family 4 glycosyl hydrolase C6M09_15485 PF11975 Family 4 glycosyl hydrolase C-terminal domain C6M09_15490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_15490 PF03466 LysR substrate binding domain C6M09_15495 PF05128 Domain of unknown function (DUF697) C6M09_15500 PF04317 YcjX-like family, DUF463 C6M09_15505 PF09584 Phage shock protein PspD (Phageshock_PspD) C6M09_15510 PF04024 PspC domain C6M09_15515 PF06667 Phage shock protein B C6M09_15520 PF04012 PspA/IM30 family C6M09_15525 PF00158 Sigma-54 interaction domain C6M09_15525 PF02954 Bacterial regulatory protein, Fis family C6M09_15530 PF07690 Major Facilitator Superfamily C6M09_15535 PF01546 Peptidase family M20/M25/M40 C6M09_15535 PF07687 Peptidase dimerisation domain C6M09_15540 PF12833 Helix-turn-helix domain C6M09_15550 PF13460 NAD(P)H-binding C6M09_15555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_15560 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_15565 PF02586 SOS response associated peptidase (SRAP) C6M09_15575 PF13438 Domain of unknown function (DUF4113) C6M09_15575 PF11799 impB/mucB/samB family C-terminal domain C6M09_15575 PF00817 impB/mucB/samB family C6M09_15575 PF11798 IMS family HHH motif C6M09_15580 PF00717 Peptidase S24-like C6M09_15585 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_15595 PF13610 DDE domain C6M09_15605 PF00893 Small Multidrug Resistance protein C6M09_15610 PF13427 Domain of unknown function (DUF4111) C6M09_15620 PF13610 DDE domain C6M09_15660 PF00149 Calcineurin-like phosphoesterase C6M09_15775 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_15775 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_15780 PF00005 ABC transporter C6M09_15780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_15785 PF00005 ABC transporter C6M09_15790 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C6M09_15795 PF05962 HutD C6M09_15810 PF17876 Cold shock domain C6M09_15810 PF08206 Ribonuclease B OB domain C6M09_15810 PF00575 S1 RNA binding domain C6M09_15810 PF00773 RNB domain C6M09_15820 PF08220 DeoR-like helix-turn-helix domain C6M09_15820 PF00455 DeoR C terminal sensor domain C6M09_15825 PF05433 Glycine zipper 2TM domain C6M09_15830 PF01253 Translation initiation factor SUI1 C6M09_15835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C6M09_15840 PF18073 Rubredoxin metal binding domain C6M09_15845 PF06305 Lipopolysaccharide assembly protein A domain C6M09_15850 PF01569 PAP2 superfamily C6M09_15855 PF00925 GTP cyclohydrolase II C6M09_15860 PF00330 Aconitase family (aconitate hydratase) C6M09_15860 PF00694 Aconitase C-terminal domain C6M09_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_15870 PF03466 LysR substrate binding domain C6M09_15875 PF01396 Topoisomerase DNA binding C4 zinc finger C6M09_15875 PF08272 Topoisomerase I zinc-ribbon-like C6M09_15875 PF01751 Toprim domain C6M09_15875 PF01131 DNA topoisomerase C6M09_15880 PF10692 Protein of unknown function (DUF2498) C6M09_15885 PF08496 Peptidase family S49 N-terminal C6M09_15885 PF01343 Peptidase family S49 C6M09_15895 PF00106 short chain dehydrogenase C6M09_15900 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C6M09_15900 PF12557 Cob(I)alamin adenosyltransferase N terminal C6M09_15905 PF00849 RNA pseudouridylate synthase C6M09_15905 PF01479 S4 domain C6M09_15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_15910 PF03466 LysR substrate binding domain C6M09_15920 PF01300 Telomere recombination C6M09_15925 PF02811 PHP domain C6M09_15930 PF00425 chorismate binding enzyme C6M09_15930 PF04715 Anthranilate synthase component I, N terminal region C6M09_15935 PF02885 Glycosyl transferase family, helical bundle domain C6M09_15935 PF00117 Glutamine amidotransferase class-I C6M09_15935 PF00591 Glycosyl transferase family, a/b domain C6M09_15940 PF00218 Indole-3-glycerol phosphate synthase C6M09_15940 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C6M09_15945 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_15950 PF00290 Tryptophan synthase alpha chain C6M09_15955 PF13660 Domain of unknown function (DUF4147) C6M09_15955 PF05161 MOFRL family C6M09_15960 PF00180 Isocitrate/isopropylmalate dehydrogenase C6M09_15965 PF07690 Major Facilitator Superfamily C6M09_15970 PF03466 LysR substrate binding domain C6M09_15970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_15990 PF00106 short chain dehydrogenase C6M09_15995 PF00593 TonB dependent receptor C6M09_15995 PF07715 TonB-dependent Receptor Plug Domain C6M09_16000 PF18331 PKHD-type hydroxylase C-terminal domain C6M09_16000 PF13640 2OG-Fe(II) oxygenase superfamily C6M09_16005 PF03922 OmpW family C6M09_16010 PF03692 Putative zinc- or iron-chelating domain C6M09_16020 PF04279 Intracellular septation protein A C6M09_16025 PF00593 TonB dependent receptor C6M09_16025 PF07715 TonB-dependent Receptor Plug Domain C6M09_16030 PF03061 Thioesterase superfamily C6M09_16035 PF14002 YniB-like protein C6M09_16040 PF13419 Haloacid dehalogenase-like hydrolase C6M09_16050 PF04307 LexA-binding, inner membrane-associated putative hydrolase C6M09_16055 PF00375 Sodium:dicarboxylate symporter family C6M09_16060 PF10729 Cell division activator CedA C6M09_16065 PF18011 C-terminal domain found in long catalases C6M09_16065 PF00199 Catalase C6M09_16065 PF06628 Catalase-related immune-responsive C6M09_16070 PF04794 YdjC-like protein C6M09_16075 PF11975 Family 4 glycosyl hydrolase C-terminal domain C6M09_16075 PF02056 Family 4 glycosyl hydrolase C6M09_16080 PF12833 Helix-turn-helix domain C6M09_16080 PF07883 Cupin domain C6M09_16085 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C6M09_16090 PF02378 Phosphotransferase system, EIIC C6M09_16100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_16105 PF04355 SmpA / OmlA family C6M09_16110 PF02540 NAD synthase C6M09_16120 PF07813 LTXXQ motif family protein C6M09_16125 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C6M09_16130 PF04996 Succinylarginine dihydrolase C6M09_16135 PF00171 Aldehyde dehydrogenase family C6M09_16140 PF04958 Arginine N-succinyltransferase beta subunit C6M09_16145 PF00202 Aminotransferase class-III C6M09_16150 PF03372 Endonuclease/Exonuclease/phosphatase family C6M09_16155 PF09335 SNARE associated Golgi protein C6M09_16160 PF09335 SNARE associated Golgi protein C6M09_16165 PF02627 Carboxymuconolactone decarboxylase family C6M09_16170 PF13416 Bacterial extracellular solute-binding protein C6M09_16175 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_16180 PF00005 ABC transporter C6M09_16185 PF00581 Rhodanese-like domain C6M09_16190 PF01066 CDP-alcohol phosphatidyltransferase C6M09_16195 PF00293 NUDIX domain C6M09_16200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C6M09_16200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C6M09_16205 PF00550 Phosphopantetheine attachment site C6M09_16205 PF00698 Acyl transferase domain C6M09_16205 PF08659 KR domain C6M09_16205 PF14765 Polyketide synthase dehydratase C6M09_16205 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_16205 PF16197 Ketoacyl-synthetase C-terminal extension C6M09_16205 PF00109 Beta-ketoacyl synthase, N-terminal domain C6M09_16205 PF02801 Beta-ketoacyl synthase, C-terminal domain C6M09_16210 PF01751 Toprim domain C6M09_16210 PF01131 DNA topoisomerase C6M09_16215 PF02769 AIR synthase related protein, C-terminal domain C6M09_16215 PF00586 AIR synthase related protein, N-terminal domain C6M09_16220 PF01569 PAP2 superfamily C6M09_16230 PF00881 Nitroreductase family C6M09_16235 PF01343 Peptidase family S49 C6M09_16240 PF00710 Asparaginase, N-terminal C6M09_16240 PF17763 Glutaminase/Asparaginase C-terminal domain C6M09_16245 PF00857 Isochorismatase family C6M09_16250 PF00083 Sugar (and other) transporter C6M09_16255 PF08220 DeoR-like helix-turn-helix domain C6M09_16255 PF00455 DeoR C terminal sensor domain C6M09_16260 PF00248 Aldo/keto reductase family C6M09_16265 PF00294 pfkB family carbohydrate kinase C6M09_16270 PF01116 Fructose-bisphosphate aldolase class-II C6M09_16275 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_16275 PF00107 Zinc-binding dehydrogenase C6M09_16280 PF00083 Sugar (and other) transporter C6M09_16285 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_16285 PF00107 Zinc-binding dehydrogenase C6M09_16290 PF00041 Fibronectin type III domain C6M09_16290 PF00704 Glycosyl hydrolases family 18 C6M09_16295 PF01844 HNH endonuclease C6M09_16300 PF07023 Protein of unknown function (DUF1315) C6M09_16305 PF01641 SelR domain C6M09_16310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C6M09_16310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C6M09_16315 PF01263 Aldose 1-epimerase C6M09_16325 PF06629 MltA-interacting protein MipA C6M09_16330 PF08298 PrkA AAA domain C6M09_16330 PF06798 PrkA serine protein kinase C-terminal domain C6M09_16335 PF04285 Protein of unknown function (DUF444) C6M09_16345 PF00255 Glutathione peroxidase C6M09_16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_16360 PF03466 LysR substrate binding domain C6M09_16365 PF07690 Major Facilitator Superfamily C6M09_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_16375 PF03466 LysR substrate binding domain C6M09_16380 PF00817 impB/mucB/samB family C6M09_16380 PF13438 Domain of unknown function (DUF4113) C6M09_16380 PF11798 IMS family HHH motif C6M09_16380 PF11799 impB/mucB/samB family C-terminal domain C6M09_16385 PF00717 Peptidase S24-like C6M09_16390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_16395 PF06183 DinI-like family C6M09_16400 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C6M09_16405 PF04073 Aminoacyl-tRNA editing domain C6M09_16410 PF04284 Protein of unknown function (DUF441) C6M09_16415 PF02311 AraC-like ligand binding domain C6M09_16415 PF12833 Helix-turn-helix domain C6M09_16420 PF07690 Major Facilitator Superfamily C6M09_16425 PF00117 Glutamine amidotransferase class-I C6M09_16425 PF06418 CTP synthase N-terminus C6M09_16430 PF04463 Protein of unknown function (DUF523) C6M09_16435 PF04343 Protein of unknown function, DUF488 C6M09_16440 PF03891 Domain of unknown function (DUF333) C6M09_16445 PF13185 GAF domain C6M09_16445 PF00990 Diguanylate cyclase, GGDEF domain C6M09_16465 PF10749 Protein of unknown function (DUF2534) C6M09_16470 PF01810 LysE type translocator C6M09_16475 PF03279 Bacterial lipid A biosynthesis acyltransferase C6M09_16480 PF17763 Glutaminase/Asparaginase C-terminal domain C6M09_16480 PF00710 Asparaginase, N-terminal C6M09_16485 PF01966 HD domain C6M09_16490 PF00990 Diguanylate cyclase, GGDEF domain C6M09_16495 PF03466 LysR substrate binding domain C6M09_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_16500 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C6M09_16530 PF02322 Cytochrome bd terminal oxidase subunit II C6M09_16535 PF01654 Cytochrome bd terminal oxidase subunit I C6M09_16540 PF05067 Manganese containing catalase C6M09_16545 PF05974 Domain of unknown function (DUF892) C6M09_16550 PF05974 Domain of unknown function (DUF892) C6M09_16555 PF10685 Stress-induced bacterial acidophilic repeat motif C6M09_16560 PF00107 Zinc-binding dehydrogenase C6M09_16560 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_16560 PF13823 Alcohol dehydrogenase GroES-associated C6M09_16565 PF06906 Protein of unknown function (DUF1272) C6M09_16590 PF00180 Isocitrate/isopropylmalate dehydrogenase C6M09_16675 PF01343 Peptidase family S49 C6M09_16690 PF03354 Phage Terminase C6M09_16735 PF00959 Phage lysozyme C6M09_16740 PF04971 Bacteriophage P21 holin S C6M09_16760 PF06147 Protein of unknown function (DUF968) C6M09_16765 PF01726 LexA DNA binding domain C6M09_16765 PF00717 Peptidase S24-like C6M09_16775 PF06183 DinI-like family C6M09_16780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_16785 PF13286 Phosphohydrolase-associated domain C6M09_16785 PF01966 HD domain C6M09_16825 PF01381 Helix-turn-helix C6M09_16845 PF12684 PDDEXK-like domain of unknown function (DUF3799) C6M09_16845 PF06630 Enterobacterial exodeoxyribonuclease VIII C6M09_16850 PF07825 Excisionase-like protein C6M09_16855 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain C6M09_16855 PF00589 Phage integrase family C6M09_16860 PF00180 Isocitrate/isopropylmalate dehydrogenase C6M09_16865 PF00849 RNA pseudouridylate synthase C6M09_16870 PF00293 NUDIX domain C6M09_16880 PF04356 Protein of unknown function (DUF489) C6M09_16885 PF08328 Adenylosuccinate lyase C-terminal C6M09_16885 PF00206 Lyase C6M09_16900 PF00486 Transcriptional regulatory protein, C terminal C6M09_16900 PF00072 Response regulator receiver domain C6M09_16905 PF08918 PhoQ Sensor C6M09_16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_16910 PF08007 Cupin superfamily protein C6M09_16915 PF01546 Peptidase family M20/M25/M40 C6M09_16915 PF07687 Peptidase dimerisation domain C6M09_16920 PF08402 TOBE domain C6M09_16920 PF00005 ABC transporter C6M09_16925 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_16930 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_16935 PF13416 Bacterial extracellular solute-binding protein C6M09_16945 PF13193 AMP-binding enzyme C-terminal domain C6M09_16945 PF00501 AMP-binding enzyme C6M09_16955 PF02146 Sir2 family C6M09_16960 PF00480 ROK family C6M09_16965 PF12704 MacB-like periplasmic core domain C6M09_16965 PF02687 FtsX-like permease family C6M09_16970 PF00005 ABC transporter C6M09_16975 PF12704 MacB-like periplasmic core domain C6M09_16975 PF02687 FtsX-like permease family C6M09_16985 PF00270 DEAD/DEAH box helicase C6M09_16985 PF00271 Helicase conserved C-terminal domain C6M09_16985 PF03461 TRCF domain C6M09_16985 PF17757 UvrB interaction domain C6M09_16985 PF02559 CarD-like/TRCF domain C6M09_16990 PF03734 L,D-transpeptidase catalytic domain C6M09_16990 PF01476 LysM domain C6M09_16990 PF17969 L,D-transpeptidase C-terminal domain C6M09_16995 PF07338 Protein of unknown function (DUF1471) C6M09_17005 PF00440 Bacterial regulatory proteins, tetR family C6M09_17015 PF00593 TonB dependent receptor C6M09_17015 PF07715 TonB-dependent Receptor Plug Domain C6M09_17020 PF05433 Glycine zipper 2TM domain C6M09_17025 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_17030 PF05728 Uncharacterised protein family (UPF0227) C6M09_17035 PF00933 Glycosyl hydrolase family 3 N terminal domain C6M09_17040 PF01636 Phosphotransferase enzyme family C6M09_17045 PF13036 Peptidoglycan-synthase activator LpoB C6M09_17050 PF07233 Protein of unknown function (DUF1425) C6M09_17055 PF01230 HIT domain C6M09_17060 PF00367 phosphotransferase system, EIIB C6M09_17060 PF02378 Phosphotransferase system, EIIC C6M09_17065 PF01026 TatD related DNase C6M09_17070 PF09115 DNA polymerase III, delta subunit, C terminal C6M09_17075 PF02223 Thymidylate kinase C6M09_17080 PF02618 YceG-like family C6M09_17085 PF01063 Amino-transferase class IV C6M09_17090 PF00109 Beta-ketoacyl synthase, N-terminal domain C6M09_17090 PF02801 Beta-ketoacyl synthase, C-terminal domain C6M09_17095 PF00550 Phosphopantetheine attachment site C6M09_17105 PF00698 Acyl transferase domain C6M09_17110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C6M09_17110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C6M09_17115 PF02504 Fatty acid synthesis protein C6M09_17120 PF01783 Ribosomal L32p protein family C6M09_17125 PF02620 Large ribosomal RNA subunit accumulation protein YceD C6M09_17130 PF02545 Maf-like protein C6M09_17135 PF00849 RNA pseudouridylate synthase C6M09_17135 PF01479 S4 domain C6M09_17145 PF00575 S1 RNA binding domain C6M09_17145 PF10150 Ribonuclease E/G family C6M09_17145 PF12111 Polyribonucleotide phosphorylase C terminal C6M09_17150 PF03466 LysR substrate binding domain C6M09_17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_17155 PF07690 Major Facilitator Superfamily C6M09_17160 PF03023 Lipid II flippase MurJ C6M09_17165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_17170 PF04337 Protein of unknown function, DUF480 C6M09_17175 PF13302 Acetyltransferase (GNAT) domain C6M09_17180 PF07690 Major Facilitator Superfamily C6M09_17185 PF07273 Protein of unknown function (DUF1439) C6M09_17190 PF01979 Amidohydrolase family C6M09_17195 PF06183 DinI-like family C6M09_17200 PF13991 BssS protein family C6M09_17205 PF01266 FAD dependent oxidoreductase C6M09_17210 PF10968 Protein of unknown function (DUF2770) C6M09_17215 PF17773 UPF0176 acylphosphatase like domain C6M09_17215 PF12368 Rhodanase C-terminal C6M09_17215 PF00581 Rhodanese-like domain C6M09_17220 PF03279 Bacterial lipid A biosynthesis acyltransferase C6M09_17225 PF07690 Major Facilitator Superfamily C6M09_17230 PF13984 MsyB protein C6M09_17235 PF07119 Protein of unknown function (DUF1375) C6M09_17240 PF00535 Glycosyl transferase family 2 C6M09_17245 PF04349 Periplasmic glucan biosynthesis protein, MdoG C6M09_17250 PF01757 Acyltransferase family C6M09_17255 PF13977 BetI-type transcriptional repressor, C-terminal C6M09_17255 PF00440 Bacterial regulatory proteins, tetR family C6M09_17260 PF01661 Macro domain C6M09_17265 PF06496 Protein of unknown function (DUF1097) C6M09_17270 PF02613 Nitrate reductase delta subunit C6M09_17275 PF02811 PHP domain C6M09_17280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_17295 PF03466 LysR substrate binding domain C6M09_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_17300 PF02678 Pirin C6M09_17300 PF05726 Pirin C-terminal cupin domain C6M09_17305 PF00857 Isochorismatase family C6M09_17315 PF01323 DSBA-like thioredoxin domain C6M09_17320 PF02562 PhoH-like protein C6M09_17325 PF04261 Dyp-type peroxidase family C6M09_17330 PF13473 Cupredoxin-like domain C6M09_17330 PF09375 Imelysin C6M09_17335 PF03239 Iron permease FTR1 family C6M09_17340 PF01773 Na+ dependent nucleoside transporter N-terminus C6M09_17340 PF07662 Na+ dependent nucleoside transporter C-terminus C6M09_17340 PF07670 Nucleoside recognition C6M09_17350 PF00474 Sodium:solute symporter family C6M09_17355 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C6M09_17355 PF01619 Proline dehydrogenase C6M09_17355 PF00171 Aldehyde dehydrogenase family C6M09_17355 PF14850 DNA-binding domain of Proline dehydrogenase C6M09_17365 PF00440 Bacterial regulatory proteins, tetR family C6M09_17365 PF08362 YcdC-like protein, C-terminal region C6M09_17370 PF00296 Luciferase-like monooxygenase C6M09_17375 PF00857 Isochorismatase family C6M09_17380 PF01042 Endoribonuclease L-PSP C6M09_17385 PF00561 alpha/beta hydrolase fold C6M09_17390 PF00881 Nitroreductase family C6M09_17395 PF01613 Flavin reductase like domain C6M09_17400 PF00860 Permease family C6M09_17410 PF10685 Stress-induced bacterial acidophilic repeat motif C6M09_17425 PF13993 YccJ-like protein C6M09_17430 PF00328 Histidine phosphatase superfamily (branch 2) C6M09_17435 PF01638 HxlR-like helix-turn-helix C6M09_17455 PF00324 Amino acid permease C6M09_17460 PF00120 Glutamine synthetase, catalytic domain C6M09_17465 PF07722 Peptidase C26 C6M09_17470 PF01381 Helix-turn-helix C6M09_17470 PF07883 Cupin domain C6M09_17475 PF00171 Aldehyde dehydrogenase family C6M09_17480 PF01266 FAD dependent oxidoreductase C6M09_17485 PF03466 LysR substrate binding domain C6M09_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_17490 PF00180 Isocitrate/isopropylmalate dehydrogenase C6M09_17495 PF02028 BCCT, betaine/carnitine/choline family transporter C6M09_17500 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C6M09_17500 PF00355 Rieske [2Fe-2S] domain C6M09_17505 PF00171 Aldehyde dehydrogenase family C6M09_17510 PF00970 Oxidoreductase FAD-binding domain C6M09_17510 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_17510 PF00175 Oxidoreductase NAD-binding domain C6M09_17530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_17535 PF01027 Inhibitor of apoptosis-promoting Bax1 C6M09_17540 PF04358 DsrC like protein C6M09_17545 PF00708 Acylphosphatase C6M09_17550 PF12833 Helix-turn-helix domain C6M09_17555 PF01161 Phosphatidylethanolamine-binding protein C6M09_17560 PF10672 S-adenosylmethionine-dependent methyltransferase C6M09_17560 PF17785 PUA-like domain C6M09_17565 PF08755 Hemimethylated DNA-binding protein YccV like C6M09_17570 PF13380 CoA binding domain C6M09_17575 PF02142 MGS-like domain C6M09_17580 PF12462 DNA helicase IV / RNA helicase N terminal C6M09_17580 PF13361 UvrD-like helicase C-terminal domain C6M09_17580 PF00580 UvrD/REP helicase N-terminal domain C6M09_17585 PF03733 Inner membrane component domain C6M09_17590 PF12805 FUSC-like inner membrane protein yccS C6M09_17595 PF04994 TfoX C-terminal domain C6M09_17595 PF04993 TfoX N-terminal domain C6M09_17600 PF03846 Cell division inhibitor SulA C6M09_17605 PF01389 OmpA-like transmembrane domain C6M09_17605 PF00691 OmpA family C6M09_17610 PF17414 MatP C-terminal ribbon-helix-helix domain C6M09_17610 PF06303 MatP N-terminal domain C6M09_17615 PF05362 Lon protease (S16) C-terminal proteolytic domain C6M09_17615 PF13654 AAA domain C6M09_17620 PF07977 FabA-like domain C6M09_17625 PF04957 Ribosome modulation factor C6M09_17630 PF03886 ABC-type transport auxiliary lipoprotein component C6M09_17635 PF02470 MlaD protein C6M09_17640 PF04403 Paraquat-inducible protein A C6M09_17645 PF00005 ABC transporter C6M09_17645 PF16326 ABC transporter C-terminal domain C6M09_17645 PF12848 ABC transporter C6M09_17650 PF01170 Putative RNA methylase family UPF0020 C6M09_17650 PF02926 THUMP domain C6M09_17650 PF10672 S-adenosylmethionine-dependent methyltransferase C6M09_17655 PF03476 MOSC N-terminal beta barrel domain C6M09_17655 PF03473 MOSC domain C6M09_17655 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_17660 PF07126 Cell-division protein ZapC C6M09_17665 PF01180 Dihydroorotate dehydrogenase C6M09_17670 PF03358 NADPH-dependent FMN reductase C6M09_17675 PF09084 NMT1/THI5 like C6M09_17680 PF00296 Luciferase-like monooxygenase C6M09_17685 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_17690 PF00005 ABC transporter C6M09_17695 PF01433 Peptidase family M1 domain C6M09_17695 PF11940 Domain of unknown function (DUF3458) Ig-like fold C6M09_17695 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C6M09_17700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C6M09_17700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C6M09_17705 PF01546 Peptidase family M20/M25/M40 C6M09_17705 PF07687 Peptidase dimerisation domain C6M09_17710 PF01546 Peptidase family M20/M25/M40 C6M09_17710 PF07687 Peptidase dimerisation domain C6M09_17720 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_17730 PF01336 OB-fold nucleic acid binding domain C6M09_17730 PF00152 tRNA synthetases class II (D, K and N) C6M09_17740 PF00155 Aminotransferase class I and II C6M09_17745 PF00753 Metallo-beta-lactamase superfamily C6M09_17750 PF05951 Bacterial protein of unknown function (DUF882) C6M09_17755 PF01471 Putative peptidoglycan binding domain C6M09_17755 PF03734 L,D-transpeptidase catalytic domain C6M09_17760 PF16330 MukB hinge domain C6M09_17760 PF04310 MukB N-terminal C6M09_17765 PF04288 MukE-like family C6M09_17770 PF17193 MukF C-terminal domain C6M09_17770 PF17192 MukF middle domain C6M09_17770 PF03882 MukF winged-helix domain C6M09_17775 PF13847 Methyltransferase domain C6M09_17780 PF02698 DUF218 domain C6M09_17785 PF01636 Phosphotransferase enzyme family C6M09_17790 PF02348 Cytidylyltransferase C6M09_17795 PF03966 Trm112p-like protein C6M09_17800 PF06224 Winged helix DNA-binding domain C6M09_17805 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C6M09_17810 PF00664 ABC transporter transmembrane region C6M09_17810 PF00005 ABC transporter C6M09_17815 PF00753 Metallo-beta-lactamase superfamily C6M09_17815 PF03772 Competence protein C6M09_17820 PF00216 Bacterial DNA-binding protein C6M09_17825 PF00575 S1 RNA binding domain C6M09_17830 PF02224 Cytidylate kinase C6M09_17835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C6M09_17840 PF00266 Aminotransferase class-V C6M09_17845 PF04239 Protein of unknown function (DUF421) C6M09_17850 PF18381 YcaO cyclodehydratase C-terminal domain C6M09_17850 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C6M09_17855 PF01226 Formate/nitrite transporter C6M09_17860 PF02901 Pyruvate formate lyase-like C6M09_17860 PF01228 Glycine radical C6M09_17865 PF04055 Radical SAM superfamily C6M09_17870 PF07690 Major Facilitator Superfamily C6M09_17875 PF04976 DMSO reductase anchor subunit (DmsC) C6M09_17880 PF12800 4Fe-4S binding domain C6M09_17880 PF13247 4Fe-4S dicluster domain C6M09_17885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C6M09_17885 PF00384 Molybdopterin oxidoreductase C6M09_17885 PF01568 Molydopterin dinucleotide binding domain C6M09_17890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C6M09_17890 PF02403 Seryl-tRNA synthetase N-terminal domain C6M09_17895 PF12002 MgsA AAA+ ATPase C terminal C6M09_17895 PF16193 AAA C-terminal domain C6M09_17895 PF00004 ATPase family associated with various cellular activities (AAA) C6M09_17900 PF03548 Outer membrane lipoprotein carrier protein LolA C6M09_17905 PF01580 FtsK/SpoIIIE family C6M09_17905 PF17854 FtsK alpha domain C6M09_17905 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C6M09_17905 PF09397 Ftsk gamma domain C6M09_17910 PF01037 Lrp/AsnC ligand binding domain C6M09_17915 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_17920 PF00664 ABC transporter transmembrane region C6M09_17920 PF00005 ABC transporter C6M09_17925 PF00664 ABC transporter transmembrane region C6M09_17925 PF00005 ABC transporter C6M09_17930 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C6M09_17935 PF01176 Translation initiation factor 1A / IF-1 C6M09_17940 PF00004 ATPase family associated with various cellular activities (AAA) C6M09_17940 PF07724 AAA domain (Cdc48 subfamily) C6M09_17940 PF02861 Clp amino terminal domain, pathogenicity island component C6M09_17940 PF10431 C-terminal, D2-small domain, of ClpB protein C6M09_17940 PF17871 AAA lid domain C6M09_17945 PF02617 ATP-dependent Clp protease adaptor protein ClpS C6M09_17950 PF00313 'Cold-shock' DNA-binding domain C6M09_17955 PF02687 FtsX-like permease family C6M09_17955 PF00005 ABC transporter C6M09_17955 PF12704 MacB-like periplasmic core domain C6M09_17960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_17965 PF11398 Protein of unknown function (DUF2813) C6M09_17970 PF00230 Major intrinsic protein C6M09_17975 PF03956 Lysine exporter LysO C6M09_17980 PF03063 Prismane/CO dehydrogenase family C6M09_17985 PF00175 Oxidoreductase NAD-binding domain C6M09_17985 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_17985 PF00970 Oxidoreductase FAD-binding domain C6M09_17995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_17995 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_17995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_18000 PF01212 Beta-eliminating lyase C6M09_18005 PF13460 NAD(P)H-binding C6M09_18005 PF11066 Protein of unknown function (DUF2867) C6M09_18010 PF01370 NAD dependent epimerase/dehydratase family C6M09_18015 PF01510 N-acetylmuramoyl-L-alanine amidase C6M09_18020 PF00563 EAL domain C6M09_18020 PF01590 GAF domain C6M09_18020 PF00990 Diguanylate cyclase, GGDEF domain C6M09_18020 PF00360 Phytochrome region C6M09_18025 PF12883 Protein of unknown function (DUF3828) C6M09_18030 PF00005 ABC transporter C6M09_18035 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_18040 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18045 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18050 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_18055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_18055 PF00989 PAS fold C6M09_18055 PF16736 Single Cache-like C6M09_18055 PF00512 His Kinase A (phospho-acceptor) domain C6M09_18060 PF00486 Transcriptional regulatory protein, C terminal C6M09_18060 PF00072 Response regulator receiver domain C6M09_18065 PF05958 tRNA (Uracil-5-)-methyltransferase C6M09_18070 PF10767 Protein of unknown function (DUF2593) C6M09_18075 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18080 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18085 PF08402 TOBE domain C6M09_18085 PF00005 ABC transporter C6M09_18090 PF13416 Bacterial extracellular solute-binding protein C6M09_18095 PF10722 Putative bacterial sensory transduction regulator C6M09_18100 PF18030 RimK PreATP-grasp domain C6M09_18100 PF08443 RimK-like ATP-grasp domain C6M09_18110 PF07214 Protein of unknown function (DUF1418) C6M09_18115 PF00462 Glutaredoxin C6M09_18120 PF11045 Putative inner membrane protein of Enterobacteriaceae C6M09_18125 PF06826 Predicted Permease Membrane Region C6M09_18125 PF02080 TrkA-C domain C6M09_18130 PF04606 Ogr/Delta-like zinc finger C6M09_18165 PF17482 Phage tail sheath C-terminal domain C6M09_18165 PF04984 Phage tail sheath protein subtilisin-like domain C6M09_18300 PF06183 DinI-like family C6M09_18310 PF05840 Bacteriophage replication gene A protein (GPA) C6M09_18315 PF02086 D12 class N6 adenine-specific DNA methyltransferase C6M09_18320 PF01258 Prokaryotic dksA/traR C4-type zinc finger C6M09_18330 PF17282 Family of unknown function (DUF5347) C6M09_18340 PF06892 Phage regulatory protein CII (CP76) C6M09_18350 PF16452 Bacteriophage CI repressor C-terminal domain C6M09_18350 PF07022 Bacteriophage CI repressor helix-turn-helix domain C6M09_18360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_18365 PF02899 Phage integrase, N-terminal SAM-like domain C6M09_18365 PF00589 Phage integrase family C6M09_18370 PF00440 Bacterial regulatory proteins, tetR family C6M09_18375 PF07690 Major Facilitator Superfamily C6M09_18385 PF07690 Major Facilitator Superfamily C6M09_18390 PF01569 PAP2 superfamily C6M09_18395 PF08220 DeoR-like helix-turn-helix domain C6M09_18395 PF00455 DeoR C terminal sensor domain C6M09_18400 PF00768 D-alanyl-D-alanine carboxypeptidase C6M09_18400 PF07943 Penicillin-binding protein 5, C-terminal domain C6M09_18410 PF00043 Glutathione S-transferase, C-terminal domain C6M09_18410 PF13417 Glutathione S-transferase, N-terminal domain C6M09_18415 PF07995 Glucose / Sorbosone dehydrogenase C6M09_18420 PF10799 Biofilm formation protein (YliH/bssR) C6M09_18425 PF01306 LacY proton/sugar symporter C6M09_18430 PF18693 TRAM domain C6M09_18430 PF00919 Uncharacterized protein family UPF0004 C6M09_18430 PF04055 Radical SAM superfamily C6M09_18435 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18435 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_18440 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_18450 PF00005 ABC transporter C6M09_18450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_18455 PF01112 Asparaginase C6M09_18460 PF00994 Probable molybdopterin binding domain C6M09_18460 PF03454 MoeA C-terminal region (domain IV) C6M09_18460 PF03453 MoeA N-terminal region (domain I and II) C6M09_18465 PF00899 ThiF family C6M09_18470 PF04055 Radical SAM superfamily C6M09_18475 PF02901 Pyruvate formate lyase-like C6M09_18475 PF01228 Glycine radical C6M09_18485 PF07350 Protein of unknown function (DUF1479) C6M09_18490 PF00356 Bacterial regulatory proteins, lacI family C6M09_18495 PF07690 Major Facilitator Superfamily C6M09_18500 PF16338 Domain of unknown function (DUF4968) C6M09_18500 PF17137 Domain of unknown function (DUF5110) C6M09_18500 PF13802 Galactose mutarotase-like C6M09_18500 PF01055 Glycosyl hydrolases family 31 C6M09_18505 PF00005 ABC transporter C6M09_18505 PF12848 ABC transporter C6M09_18510 PF13350 Tyrosine phosphatase family C6M09_18515 PF17969 L,D-transpeptidase C-terminal domain C6M09_18515 PF03734 L,D-transpeptidase catalytic domain C6M09_18520 PF07702 UTRA domain C6M09_18520 PF00392 Bacterial regulatory proteins, gntR family C6M09_18525 PF00232 Glycosyl hydrolase family 1 C6M09_18530 PF03600 Citrate transporter C6M09_18535 PF02742 Iron dependent repressor, metal binding and dimerisation domain C6M09_18535 PF01325 Iron dependent repressor, N-terminal DNA binding domain C6M09_18545 PF00884 Sulfatase C6M09_18550 PF13505 Outer membrane protein beta-barrel domain C6M09_18555 PF00892 EamA-like transporter family C6M09_18560 PF00210 Ferritin-like domain C6M09_18565 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_18570 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18575 PF00005 ABC transporter C6M09_18580 PF00924 Mechanosensitive ion channel C6M09_18585 PF05971 RNA methyltransferase C6M09_18590 PF01613 Flavin reductase like domain C6M09_18600 PF01258 Prokaryotic dksA/traR C4-type zinc finger C6M09_18605 PF07338 Protein of unknown function (DUF1471) C6M09_18610 PF02885 Glycosyl transferase family, helical bundle domain C6M09_18615 PF00270 DEAD/DEAH box helicase C6M09_18615 PF06733 DEAD_2 C6M09_18615 PF13307 Helicase C-terminal domain C6M09_18620 PF00270 DEAD/DEAH box helicase C6M09_18620 PF00271 Helicase conserved C-terminal domain C6M09_18625 PF02780 Transketolase, C-terminal domain C6M09_18625 PF02779 Transketolase, pyrimidine binding domain C6M09_18630 PF00456 Transketolase, thiamine diphosphate binding domain C6M09_18640 PF07690 Major Facilitator Superfamily C6M09_18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_18650 PF03466 LysR substrate binding domain C6M09_18655 PF09209 Tetracyclin repressor-like, C-terminal domain C6M09_18655 PF00440 Bacterial regulatory proteins, tetR family C6M09_18660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_18665 PF00005 ABC transporter C6M09_18680 PF11076 Putative inner membrane protein YbhQ C6M09_18685 PF03372 Endonuclease/Exonuclease/phosphatase family C6M09_18690 PF13091 PLD-like domain C6M09_18695 PF03706 Lysylphosphatidylglycerol synthase TM region C6M09_18700 PF01027 Inhibitor of apoptosis-promoting Bax1 C6M09_18705 PF02391 MoaE protein C6M09_18710 PF02597 ThiS family C6M09_18715 PF01967 MoaC family C6M09_18720 PF00994 Probable molybdopterin binding domain C6M09_18725 PF04055 Radical SAM superfamily C6M09_18725 PF06463 Molybdenum Cofactor Synthesis C C6M09_18730 PF01933 Uncharacterised protein family UPF0052 C6M09_18735 PF08019 Phosphoethanolamine transferase EptA/EptB C6M09_18735 PF00884 Sulfatase C6M09_18740 PF00486 Transcriptional regulatory protein, C terminal C6M09_18740 PF00072 Response regulator receiver domain C6M09_18745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_18745 PF00512 His Kinase A (phospho-acceptor) domain C6M09_18750 PF04851 Type III restriction enzyme, res subunit C6M09_18750 PF00271 Helicase conserved C-terminal domain C6M09_18750 PF12344 Ultra-violet resistance protein B C6M09_18750 PF17757 UvrB interaction domain C6M09_18750 PF02151 UvrB/uvrC motif C6M09_18760 PF00005 ABC transporter C6M09_18770 PF08241 Methyltransferase domain C6M09_18775 PF00155 Aminotransferase class I and II C6M09_18780 PF04055 Radical SAM superfamily C6M09_18780 PF06968 Biotin and Thiamin Synthesis associated domain C6M09_18785 PF00202 Aminotransferase class-III C6M09_18790 PF01161 Phosphatidylethanolamine-binding protein C6M09_18795 PF00324 Amino acid permease C6M09_18800 PF00221 Aromatic amino acid lyase C6M09_18805 PF17392 Urocanase C-terminal domain C6M09_18805 PF17391 Urocanase N-terminal domain C6M09_18805 PF01175 Urocanase Rossmann-like domain C6M09_18815 PF00392 Bacterial regulatory proteins, gntR family C6M09_18815 PF07702 UTRA domain C6M09_18820 PF00491 Arginase family C6M09_18825 PF01979 Amidohydrolase family C6M09_18830 PF01095 Pectinesterase C6M09_18865 PF13411 MerR HTH family regulatory protein C6M09_18870 PF00563 EAL domain C6M09_18870 PF04940 Sensors of blue-light using FAD C6M09_18875 PF10798 Biofilm development protein YmgB/AriR C6M09_18885 PF10798 Biofilm development protein YmgB/AriR C6M09_18890 PF10282 Lactonase, 7-bladed beta-propeller C6M09_18900 PF00005 ABC transporter C6M09_18900 PF03459 TOBE domain C6M09_18905 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_18915 PF10766 Multidrug efflux pump-associated protein AcrZ C6M09_18920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_18920 PF03459 TOBE domain C6M09_18925 PF00005 ABC transporter C6M09_18930 PF16363 GDP-mannose 4,6 dehydratase C6M09_18935 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C6M09_18935 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C6M09_18940 PF10509 Galactokinase galactose-binding signature C6M09_18940 PF08544 GHMP kinases C terminal C6M09_18940 PF00288 GHMP kinases N terminal domain C6M09_18945 PF01263 Aldose 1-epimerase C6M09_18950 PF00300 Histidine phosphatase superfamily (branch 1) C6M09_18955 PF00793 DAHP synthetase I family C6M09_18960 PF13985 YbgS-like protein C6M09_18965 PF01545 Cation efflux family C6M09_18970 PF04973 Nicotinamide mononucleotide transporter C6M09_18975 PF02445 Quinolinate synthetase A protein C6M09_19015 PF13174 Tetratricopeptide repeat C6M09_19015 PF16331 TolA binding protein trimerisation C6M09_19020 PF00691 OmpA family C6M09_19025 PF04052 TolB amino-terminal domain C6M09_19025 PF07676 WD40-like Beta Propeller Repeat C6M09_19030 PF06519 TolA C-terminal C6M09_19035 PF02472 Biopolymer transport protein ExbD/TolR C6M09_19040 PF01618 MotA/TolQ/ExbB proton channel family C6M09_19045 PF03061 Thioesterase superfamily C6M09_19050 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C6M09_19055 PF08173 Membrane bound YbgT-like protein C6M09_19060 PF02322 Cytochrome bd terminal oxidase subunit II C6M09_19065 PF01654 Cytochrome bd terminal oxidase subunit I C6M09_19070 PF02629 CoA binding domain C6M09_19070 PF00549 CoA-ligase C6M09_19075 PF08442 ATP-grasp domain C6M09_19075 PF00549 CoA-ligase C6M09_19080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C6M09_19080 PF00364 Biotin-requiring enzyme C6M09_19080 PF02817 e3 binding domain C6M09_19085 PF16078 2-oxoglutarate dehydrogenase N-terminus C6M09_19085 PF16870 2-oxoglutarate dehydrogenase C-terminal C6M09_19085 PF00676 Dehydrogenase E1 component C6M09_19085 PF02779 Transketolase, pyrimidine binding domain C6M09_19090 PF13085 2Fe-2S iron-sulfur cluster binding domain C6M09_19095 PF00890 FAD binding domain C6M09_19095 PF02910 Fumarate reductase flavoprotein C-term C6M09_19100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C6M09_19105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C6M09_19110 PF00285 Citrate synthase, C-terminal domain C6M09_19115 PF06827 Zinc finger found in FPG and IleRS C6M09_19115 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C6M09_19115 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C6M09_19120 PF01470 Pyroglutamyl peptidase C6M09_19135 PF03746 LamB/YcsF family C6M09_19140 PF02626 Carboxyltransferase domain, subdomain A and B C6M09_19145 PF02682 Carboxyltransferase domain, subdomain C and D C6M09_19150 PF01784 NIF3 (NGG1p interacting factor 3) C6M09_19155 PF00854 POT family C6M09_19160 PF00875 DNA photolyase C6M09_19160 PF03441 FAD binding domain of DNA photolyase C6M09_19165 PF10725 Protein of unknown function (DUF2517) C6M09_19170 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) C6M09_19175 PF03814 Potassium-transporting ATPase A subunit C6M09_19185 PF02669 K+-transporting ATPase, c chain C6M09_19190 PF13493 Domain of unknown function (DUF4118) C6M09_19190 PF02702 Osmosensitive K+ channel His kinase sensor domain C6M09_19190 PF00512 His Kinase A (phospho-acceptor) domain C6M09_19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_19190 PF13492 GAF domain C6M09_19195 PF00486 Transcriptional regulatory protein, C terminal C6M09_19195 PF00072 Response regulator receiver domain C6M09_19205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C6M09_19205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C6M09_19205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C6M09_19205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C6M09_19210 PF03925 SeqA protein C-terminal domain C6M09_19210 PF17206 SeqA protein N-terminal domain C6M09_19215 PF12697 Alpha/beta hydrolase family C6M09_19220 PF01402 Ribbon-helix-helix protein, copG family C6M09_19225 PF00258 Flavodoxin C6M09_19230 PF01475 Ferric uptake regulator family C6M09_19240 PF13982 YbfN-like lipoprotein C6M09_19245 PF03573 outer membrane porin, OprD family C6M09_19255 PF00749 tRNA synthetases class I (E and Q), catalytic domain C6M09_19255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C6M09_19260 PF02378 Phosphotransferase system, EIIC C6M09_19260 PF00367 phosphotransferase system, EIIB C6M09_19260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6M09_19265 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C6M09_19270 PF01979 Amidohydrolase family C6M09_19275 PF01047 MarR family C6M09_19275 PF00480 ROK family C6M09_19280 PF13344 Haloacid dehalogenase-like hydrolase C6M09_19285 PF13537 Glutamine amidotransferase domain C6M09_19285 PF00733 Asparagine synthase C6M09_19325 PF01494 FAD binding domain C6M09_19330 PF00919 Uncharacterized protein family UPF0004 C6M09_19330 PF01938 TRAM domain C6M09_19330 PF04055 Radical SAM superfamily C6M09_19335 PF02562 PhoH-like protein C6M09_19340 PF02130 Uncharacterized protein family UPF0054 C6M09_19345 PF03471 Transporter associated domain C6M09_19345 PF00571 CBS domain C6M09_19350 PF00795 Carbon-nitrogen hydrolase C6M09_19355 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_19360 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_19365 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_19370 PF00005 ABC transporter C6M09_19375 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C6M09_19375 PF08479 POTRA domain, ShlB-type C6M09_19375 PF17287 POTRA domain C6M09_19380 PF13332 Hemagglutinin repeat C6M09_19380 PF05594 Haemagluttinin repeat C6M09_19380 PF14436 Bacterial EndoU nuclease C6M09_19380 PF04829 Pre-toxin domain with VENN motif C6M09_19380 PF05860 haemagglutination activity domain C6M09_19385 PF07295 Zinc-ribbon containing domain C6M09_19390 PF08264 Anticodon-binding domain of tRNA C6M09_19390 PF00133 tRNA synthetases class I (I, L, M and V) C6M09_19390 PF13603 Leucyl-tRNA synthetase, Domain 2 C6M09_19395 PF04390 Lipopolysaccharide-assembly C6M09_19400 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C6M09_19400 PF06144 DNA polymerase III, delta subunit C6M09_19405 PF01467 Cytidylyltransferase-like C6M09_19410 PF00300 Histidine phosphatase superfamily (branch 1) C6M09_19420 PF02590 Predicted SPOUT methyltransferase C6M09_19425 PF03717 Penicillin-binding Protein dimerisation domain C6M09_19425 PF00905 Penicillin binding protein transpeptidase domain C6M09_19430 PF01098 Cell cycle protein C6M09_19435 PF03330 Lytic transglycolase C6M09_19435 PF05036 Sporulation related domain C6M09_19440 PF00768 D-alanyl-D-alanine carboxypeptidase C6M09_19440 PF07943 Penicillin-binding protein 5, C-terminal domain C6M09_19445 PF04359 Protein of unknown function (DUF493) C6M09_19450 PF03099 Biotin/lipoate A/B protein ligase family C6M09_19455 PF03466 LysR substrate binding domain C6M09_19455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_19460 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C6M09_19460 PF04055 Radical SAM superfamily C6M09_19465 PF02416 mttA/Hcf106 family C6M09_19470 PF00795 Carbon-nitrogen hydrolase C6M09_19475 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C6M09_19480 PF00313 'Cold-shock' DNA-binding domain C6M09_19485 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP C6M09_19490 PF03606 C4-dicarboxylate anaerobic carrier C6M09_19495 PF00445 Ribonuclease T2 family C6M09_19500 PF01272 Transcription elongation factor, GreA/GreB, C-term C6M09_19500 PF14760 Rnk N-terminus C6M09_19505 PF00582 Universal stress protein family C6M09_19510 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_19510 PF13192 Thioredoxin domain C6M09_19515 PF00578 AhpC/TSA family C6M09_19515 PF10417 C-terminal domain of 1-Cys peroxiredoxin C6M09_19520 PF13098 Thioredoxin-like domain C6M09_19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_19525 PF03466 LysR substrate binding domain C6M09_19530 PF11922 Domain of unknown function (DUF3440) C6M09_19530 PF01507 Phosphoadenosine phosphosulfate reductase family C6M09_19535 PF02195 ParB-like nuclease domain C6M09_19540 PF00155 Aminotransferase class I and II C6M09_19550 PF03079 ARD/ARD' family C6M09_19555 PF01568 Molydopterin dinucleotide binding domain C6M09_19555 PF00384 Molybdopterin oxidoreductase C6M09_19565 PF00005 ABC transporter C6M09_19570 PF02653 Branched-chain amino acid transport system / permease component C6M09_19575 PF02653 Branched-chain amino acid transport system / permease component C6M09_19585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6M09_19585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_19590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_19590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_19595 PF00596 Class II Aldolase and Adducin N-terminal domain C6M09_19600 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C6M09_19610 PF07969 Amidohydrolase family C6M09_19615 PF00356 Bacterial regulatory proteins, lacI family C6M09_19620 PF00459 Inositol monophosphatase family C6M09_19625 PF07690 Major Facilitator Superfamily C6M09_19630 PF00328 Histidine phosphatase superfamily (branch 2) C6M09_19635 PF01008 Initiation factor 2 subunit family C6M09_19640 PF01636 Phosphotransferase enzyme family C6M09_19655 PF02653 Branched-chain amino acid transport system / permease component C6M09_19660 PF00005 ABC transporter C6M09_19665 PF00465 Iron-containing alcohol dehydrogenase C6M09_19685 PF04328 Selenoprotein, putative C6M09_19690 PF02554 Carbon starvation protein CstA C6M09_19690 PF13722 5TM C-terminal transporter carbon starvation CstA C6M09_19695 PF03061 Thioesterase superfamily C6M09_19705 PF00857 Isochorismatase family C6M09_19705 PF00550 Phosphopantetheine attachment site C6M09_19710 PF00501 AMP-binding enzyme C6M09_19710 PF13193 AMP-binding enzyme C-terminal domain C6M09_19715 PF00425 chorismate binding enzyme C6M09_19720 PF01497 Periplasmic binding protein C6M09_19725 PF05977 Transmembrane secretion effector C6M09_19730 PF01032 FecCD transport family C6M09_19735 PF01032 FecCD transport family C6M09_19740 PF00005 ABC transporter C6M09_19745 PF00975 Thioesterase domain C6M09_19745 PF00550 Phosphopantetheine attachment site C6M09_19745 PF00501 AMP-binding enzyme C6M09_19745 PF00668 Condensation domain C6M09_19745 PF13193 AMP-binding enzyme C-terminal domain C6M09_19750 PF03621 MbtH-like protein C6M09_19755 PF00756 Putative esterase C6M09_19755 PF11806 Domain of unknown function (DUF3327) C6M09_19760 PF07715 TonB-dependent Receptor Plug Domain C6M09_19760 PF00593 TonB dependent receptor C6M09_19765 PF01648 4'-phosphopantetheinyl transferase superfamily C6M09_19765 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C6M09_19770 PF02780 Transketolase, C-terminal domain C6M09_19770 PF02779 Transketolase, pyrimidine binding domain C6M09_19775 PF00456 Transketolase, thiamine diphosphate binding domain C6M09_19780 PF04198 Putative sugar-binding domain C6M09_19780 PF00325 Bacterial regulatory proteins, crp family C6M09_19785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_19785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_19790 PF13407 Periplasmic binding protein domain C6M09_19800 PF00005 ABC transporter C6M09_19805 PF02653 Branched-chain amino acid transport system / permease component C6M09_19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_19825 PF03466 LysR substrate binding domain C6M09_19830 PF00924 Mechanosensitive ion channel C6M09_19840 PF02028 BCCT, betaine/carnitine/choline family transporter C6M09_19845 PF00440 Bacterial regulatory proteins, tetR family C6M09_19845 PF13977 BetI-type transcriptional repressor, C-terminal C6M09_19850 PF00171 Aldehyde dehydrogenase family C6M09_19855 PF05199 GMC oxidoreductase C6M09_19855 PF00732 GMC oxidoreductase C6M09_19865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_19870 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_19875 PF12911 N-terminal TM domain of oligopeptide transport permease C C6M09_19875 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_19880 PF00005 ABC transporter C6M09_19880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_19885 PF00005 ABC transporter C6M09_19885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6M09_19890 PF00202 Aminotransferase class-III C6M09_19895 PF00106 short chain dehydrogenase C6M09_19900 PF00005 ABC transporter C6M09_19905 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_19910 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_19915 PF01464 Transglycosylase SLT domain C6M09_19915 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_19920 PF00155 Aminotransferase class I and II C6M09_19920 PF00392 Bacterial regulatory proteins, gntR family C6M09_19925 PF00155 Aminotransferase class I and II C6M09_19930 PF00892 EamA-like transporter family C6M09_19935 PF04107 Glutamate-cysteine ligase family 2(GCS2) C6M09_19940 PF09992 Phosphodiester glycosidase C6M09_19950 PF00873 AcrB/AcrD/AcrF family C6M09_19955 PF13533 Biotin-lipoyl like C6M09_19960 PF00690 Cation transporter/ATPase, N-terminus C6M09_19960 PF00689 Cation transporting ATPase, C-terminus C6M09_19985 PF07690 Major Facilitator Superfamily C6M09_19990 PF00924 Mechanosensitive ion channel C6M09_19995 PF00356 Bacterial regulatory proteins, lacI family C6M09_20010 PF16449 Fimbrillin MatB C6M09_20015 PF18649 EcpB C-terminal domain C6M09_20020 PF16967 E-set like domain C6M09_20020 PF15976 CS1-pili formation C-terminal C6M09_20035 PF00196 Bacterial regulatory proteins, luxR family C6M09_20045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_20045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_20055 PF03825 Nucleoside H+ symporter C6M09_20060 PF00324 Amino acid permease C6M09_20065 PF07715 TonB-dependent Receptor Plug Domain C6M09_20065 PF00593 TonB dependent receptor C6M09_20075 PF00171 Aldehyde dehydrogenase family C6M09_20080 PF01266 FAD dependent oxidoreductase C6M09_20090 PF13520 Amino acid permease C6M09_20100 PF00850 Histone deacetylase domain C6M09_20110 PF00196 Bacterial regulatory proteins, luxR family C6M09_20115 PF04055 Radical SAM superfamily C6M09_20120 PF00884 Sulfatase C6M09_20130 PF17409 MoaF C-terminal domain C6M09_20130 PF10703 MoaF N-terminal domain C6M09_20135 PF00248 Aldo/keto reductase family C6M09_20140 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_20145 PF07687 Peptidase dimerisation domain C6M09_20145 PF01546 Peptidase family M20/M25/M40 C6M09_20175 PF01032 FecCD transport family C6M09_20180 PF00005 ABC transporter C6M09_20185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_20185 PF00529 HlyD membrane-fusion protein of T1SS C6M09_20190 PF11742 Protein of unknown function (DUF3302) C6M09_20200 PF00294 pfkB family carbohydrate kinase C6M09_20205 PF02264 LamB porin C6M09_20205 PF11471 Maltoporin periplasmic N-terminal extension C6M09_20210 PF02378 Phosphotransferase system, EIIC C6M09_20210 PF00367 phosphotransferase system, EIIB C6M09_20215 PF00251 Glycosyl hydrolases family 32 N-terminal domain C6M09_20215 PF08244 Glycosyl hydrolases family 32 C terminal C6M09_20220 PF13407 Periplasmic binding protein domain C6M09_20220 PF00356 Bacterial regulatory proteins, lacI family C6M09_20230 PF02653 Branched-chain amino acid transport system / permease component C6M09_20235 PF00005 ABC transporter C6M09_20240 PF13407 Periplasmic binding protein domain C6M09_20245 PF00356 Bacterial regulatory proteins, lacI family C6M09_20250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_20250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_20255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_20255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_20260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_20260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_20265 PF01261 Xylose isomerase-like TIM barrel C6M09_20275 PF01336 OB-fold nucleic acid binding domain C6M09_20275 PF00152 tRNA synthetases class II (D, K and N) C6M09_20280 PF00854 POT family C6M09_20285 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C6M09_20285 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C6M09_20285 PF01276 Orn/Lys/Arg decarboxylase, major domain C6M09_20290 PF13520 Amino acid permease C6M09_20295 PF00486 Transcriptional regulatory protein, C terminal C6M09_20295 PF18500 CadC C-terminal domain 1 C6M09_20305 PF03279 Bacterial lipid A biosynthesis acyltransferase C6M09_20320 PF13954 PapC N-terminal domain C6M09_20320 PF13953 PapC C-terminal domain C6M09_20320 PF00577 Outer membrane usher protein C6M09_20325 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_20325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_20330 PF16970 Type-1 fimbrial protein, A C6M09_20345 PF00285 Citrate synthase, C-terminal domain C6M09_20360 PF00576 HIUase/Transthyretin family C6M09_20375 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C6M09_20375 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C6M09_20385 PF09190 DALR domain C6M09_20385 PF01406 tRNA synthetases class I (C) catalytic domain C6M09_20390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C6M09_20395 PF00149 Calcineurin-like phosphoesterase C6M09_20405 PF00731 AIR carboxylase C6M09_20410 PF02222 ATP-grasp domain C6M09_20410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C6M09_20420 PF00267 Gram-negative porin C6M09_20435 PF00005 ABC transporter C6M09_20440 PF13472 GDSL-like Lipase/Acylhydrolase family C6M09_20445 PF00106 short chain dehydrogenase C6M09_20450 PF00085 Thioredoxin C6M09_20455 PF03649 Uncharacterised protein family (UPF0014) C6M09_20460 PF00005 ABC transporter C6M09_20465 PF16200 C-terminal region of band_7 C6M09_20465 PF01145 SPFH domain / Band 7 family C6M09_20470 PF01957 NfeD-like C-terminal, partner-binding C6M09_20475 PF13411 MerR HTH family regulatory protein C6M09_20480 PF00403 Heavy-metal-associated domain C6M09_20485 PF01963 TraB family C6M09_20490 PF04073 Aminoacyl-tRNA editing domain C6M09_20495 PF00149 Calcineurin-like phosphoesterase C6M09_20495 PF02872 5'-nucleotidase, C-terminal domain C6M09_20500 PF07690 Major Facilitator Superfamily C6M09_20505 PF02254 TrkA-N domain C6M09_20505 PF00999 Sodium/hydrogen exchanger family C6M09_20510 PF00294 pfkB family carbohydrate kinase C6M09_20515 PF00762 Ferrochelatase C6M09_20520 PF05191 Adenylate kinase, active site lid C6M09_20525 PF00183 Hsp90 protein C6M09_20525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_20530 PF13662 Toprim domain C6M09_20530 PF02132 RecR protein C6M09_20535 PF02575 YbaB/EbfC DNA-binding family C6M09_20540 PF12169 DNA polymerase III subunits gamma and tau domain III C6M09_20540 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C6M09_20540 PF12170 DNA polymerase III tau subunit V interacting with alpha C6M09_20545 PF00156 Phosphoribosyl transferase domain C6M09_20550 PF04304 Protein of unknown function (DUF454) C6M09_20555 PF07445 Primosomal replication protein priC C6M09_20560 PF10689 Protein of unknown function (DUF2496) C6M09_20565 PF04754 Putative transposase, YhgA-like C6M09_20570 PF12794 Mechanosensitive ion channel inner membrane domain 1 C6M09_20570 PF12795 Mechanosensitive ion channel porin domain C6M09_20570 PF00924 Mechanosensitive ion channel C6M09_20590 PF00529 HlyD membrane-fusion protein of T1SS C6M09_20590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_20595 PF00873 AcrB/AcrD/AcrF family C6M09_20600 PF10757 Biofilm formation regulator YbaJ C6M09_20605 PF05321 Haemolysin expression modulating protein C6M09_20610 PF12464 Maltose acetyltransferase C6M09_20610 PF14602 Hexapeptide repeat of succinyl-transferase C6M09_20620 PF10777 Inner membrane protein YlaC C6M09_20625 PF00392 Bacterial regulatory proteins, gntR family C6M09_20625 PF00155 Aminotransferase class I and II C6M09_20635 PF00444 Ribosomal protein L36 C6M09_20640 PF01197 Ribosomal protein L31 C6M09_20645 PF00356 Bacterial regulatory proteins, lacI family C6M09_20650 PF02264 LamB porin C6M09_20655 PF02378 Phosphotransferase system, EIIC C6M09_20655 PF00367 phosphotransferase system, EIIB C6M09_20660 PF08532 Beta-galactosidase trimerisation domain C6M09_20660 PF08533 Beta-galactosidase C-terminal domain C6M09_20660 PF02449 Beta-galactosidase C6M09_20665 PF07745 Glycosyl hydrolase family 53 C6M09_20670 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_20675 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_20680 PF13416 Bacterial extracellular solute-binding protein C6M09_20685 PF17912 MalK OB fold domain C6M09_20685 PF00005 ABC transporter C6M09_20690 PF12792 CSS motif domain associated with EAL C6M09_20690 PF00563 EAL domain C6M09_20695 PF02583 Metal-sensitive transcriptional repressor C6M09_20700 PF03824 High-affinity nickel-transport protein C6M09_20735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C6M09_20740 PF09619 Type III secretion system lipoprotein chaperone (YscW) C6M09_20750 PF00909 Ammonium Transporter Family C6M09_20755 PF00543 Nitrogen regulatory protein P-II C6M09_20760 PF00005 ABC transporter C6M09_20760 PF00664 ABC transporter transmembrane region C6M09_20765 PF00005 ABC transporter C6M09_20765 PF00664 ABC transporter transmembrane region C6M09_20770 PF01037 Lrp/AsnC ligand binding domain C6M09_20770 PF13404 AsnC-type helix-turn-helix domain C6M09_20775 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_20785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_20785 PF12793 Sugar transport-related sRNA regulator N-term C6M09_20790 PF06508 Queuosine biosynthesis protein QueC C6M09_20805 PF13145 PPIC-type PPIASE domain C6M09_20810 PF00216 Bacterial DNA-binding protein C6M09_20815 PF02190 ATP-dependent protease La (LON) substrate-binding domain C6M09_20815 PF05362 Lon protease (S16) C-terminal proteolytic domain C6M09_20815 PF00004 ATPase family associated with various cellular activities (AAA) C6M09_20820 PF07724 AAA domain (Cdc48 subfamily) C6M09_20820 PF06689 ClpX C4-type zinc finger C6M09_20820 PF10431 C-terminal, D2-small domain, of ClpB protein C6M09_20825 PF00574 Clp protease C6M09_20830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C6M09_20830 PF05697 Bacterial trigger factor protein (TF) C6M09_20830 PF05698 Bacterial trigger factor protein (TF) C-terminus C6M09_20835 PF01722 BolA-like protein C6M09_20840 PF03923 Uncharacterized lipoprotein C6M09_20840 PF08139 Prokaryotic membrane lipoprotein lipid attachment site C6M09_20845 PF07690 Major Facilitator Superfamily C6M09_20850 PF06481 COX Aromatic Rich Motif C6M09_20850 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C6M09_20855 PF00115 Cytochrome C and Quinol oxidase polypeptide I C6M09_20860 PF00510 Cytochrome c oxidase subunit III C6M09_20865 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C6M09_20870 PF01040 UbiA prenyltransferase family C6M09_20880 PF01614 Bacterial transcriptional regulator C6M09_20880 PF09339 IclR helix-turn-helix domain C6M09_20885 PF08501 Shikimate dehydrogenase substrate binding domain C6M09_20885 PF01488 Shikimate / quinate 5-dehydrogenase C6M09_20885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C6M09_20890 PF00890 FAD binding domain C6M09_20900 PF00890 FAD binding domain C6M09_20910 PF07690 Major Facilitator Superfamily C6M09_20915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_20915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_20920 PF07690 Major Facilitator Superfamily C6M09_20925 PF04461 Protein of unknown function (DUF520) C6M09_20930 PF02558 Ketopantoate reductase PanE/ApbA C6M09_20930 PF08546 Ketopantoate reductase PanE/ApbA C terminal C6M09_20935 PF01965 DJ-1/PfpI family C6M09_20945 PF02926 THUMP domain C6M09_20945 PF02568 Thiamine biosynthesis protein (ThiI) C6M09_20950 PF02609 Exonuclease VII small subunit C6M09_20955 PF00348 Polyprenyl synthetase C6M09_20960 PF02780 Transketolase, C-terminal domain C6M09_20960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C6M09_20960 PF02779 Transketolase, pyrimidine binding domain C6M09_20965 PF00248 Aldo/keto reductase family C6M09_20970 PF04608 Phosphatidylglycerophosphatase A C6M09_20975 PF02769 AIR synthase related protein, C-terminal domain C6M09_20975 PF00586 AIR synthase related protein, N-terminal domain C6M09_20980 PF01029 NusB family C6M09_20985 PF00885 6,7-dimethyl-8-ribityllumazine synthase C6M09_20990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C6M09_20990 PF01872 RibD C-terminal domain C6M09_20995 PF03477 ATP cone domain C6M09_21000 PF11622 Protein of unknown function (DUF3251) C6M09_21005 PF03502 Nucleoside-specific channel-forming protein, Tsx C6M09_21020 PF02355 Protein export membrane protein C6M09_21020 PF07549 SecD/SecF GG Motif C6M09_21025 PF02355 Protein export membrane protein C6M09_21025 PF13721 SecD export protein N-terminal TM region C6M09_21025 PF07549 SecD/SecF GG Motif C6M09_21030 PF02699 Preprotein translocase subunit C6M09_21035 PF01702 Queuine tRNA-ribosyltransferase C6M09_21040 PF02547 Queuosine biosynthesis protein C6M09_21050 PF04336 Acyl carrier protein phosphodiesterase C6M09_21055 PF10417 C-terminal domain of 1-Cys peroxiredoxin C6M09_21055 PF00578 AhpC/TSA family C6M09_21065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_21075 PF03611 PTS system sugar-specific permease component C6M09_21080 PF00294 pfkB family carbohydrate kinase C6M09_21085 PF01116 Fructose-bisphosphate aldolase class-II C6M09_21090 PF01979 Amidohydrolase family C6M09_21100 PF00857 Isochorismatase family C6M09_21105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_21105 PF03466 LysR substrate binding domain C6M09_21110 PF00128 Alpha amylase, catalytic domain C6M09_21110 PF02903 Alpha amylase, N-terminal ig-like domain C6M09_21115 PF00324 Amino acid permease C6M09_21120 PF05525 Branched-chain amino acid transport protein C6M09_21125 PF00512 His Kinase A (phospho-acceptor) domain C6M09_21125 PF00989 PAS fold C6M09_21125 PF11808 Phosphate regulon sensor protein PhoR C6M09_21125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_21130 PF00486 Transcriptional regulatory protein, C terminal C6M09_21130 PF00072 Response regulator receiver domain C6M09_21135 PF12320 Type 5 capsule protein repressor C-terminal domain C6M09_21135 PF00149 Calcineurin-like phosphoesterase C6M09_21140 PF13476 AAA domain C6M09_21145 PF00480 ROK family C6M09_21150 PF04381 Putative exonuclease, RdgC C6M09_21155 PF06865 Pyrimidine/purine nucleoside phosphorylase C6M09_21160 PF07302 AroM protein C6M09_21165 PF16362 YaiA protein C6M09_21170 PF01202 Shikimate kinase C6M09_21175 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) C6M09_21180 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C6M09_21185 PF14748 Pyrroline-5-carboxylate reductase dimerisation C6M09_21185 PF03807 NADP oxidoreductase coenzyme F420-dependent C6M09_21190 PF07769 psiF repeat C6M09_21195 PF00245 Alkaline phosphatase C6M09_21200 PF10796 Sigma-S stabilisation anti-adaptor protein C6M09_21205 PF07690 Major Facilitator Superfamily C6M09_21215 PF01820 D-ala D-ala ligase N-terminus C6M09_21215 PF07478 D-ala D-ala ligase C-terminus C6M09_21220 PF10953 Protein of unknown function (DUF2754) C6M09_21225 PF10954 Protein of unknown function (DUF2755) C6M09_21230 PF07759 Protein of unknown function (DUF1615) C6M09_21250 PF00857 Isochorismatase family C6M09_21255 PF00144 Beta-lactamase C6M09_21260 PF00490 Delta-aminolevulinic acid dehydratase C6M09_21270 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C6M09_21275 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_21280 PF00005 ABC transporter C6M09_21285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C6M09_21290 PF02574 Homocysteine S-methyltransferase C6M09_21295 PF00324 Amino acid permease C6M09_21305 PF00324 Amino acid permease C6M09_21310 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C6M09_21315 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C6M09_21325 PF13458 Periplasmic binding protein C6M09_21330 PF02653 Branched-chain amino acid transport system / permease component C6M09_21335 PF02653 Branched-chain amino acid transport system / permease component C6M09_21335 PF11862 Domain of unknown function (DUF3382) C6M09_21340 PF12399 Branched-chain amino acid ATP-binding cassette transporter C6M09_21340 PF00005 ABC transporter C6M09_21345 PF00005 ABC transporter C6M09_21355 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_21360 PF00005 ABC transporter C6M09_21365 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_21370 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_21385 PF15976 CS1-pili formation C-terminal C6M09_21385 PF16967 E-set like domain C6M09_21390 PF18649 EcpB C-terminal domain C6M09_21395 PF16449 Fimbrillin MatB C6M09_21400 PF00196 Bacterial regulatory proteins, luxR family C6M09_21405 PF00005 ABC transporter C6M09_21415 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_21420 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_21440 PF00877 NlpC/P60 family C6M09_21445 PF00267 Gram-negative porin C6M09_21450 PF00696 Amino acid kinase family C6M09_21450 PF01472 PUA domain C6M09_21455 PF00171 Aldehyde dehydrogenase family C6M09_21465 PF13356 Arm DNA-binding domain C6M09_21465 PF14659 Phage integrase, N-terminal SAM-like domain C6M09_21465 PF00589 Phage integrase family C6M09_21470 PF13614 AAA domain C6M09_21485 PF04606 Ogr/Delta-like zinc finger C6M09_21510 PF17345 Family of unknown function (DUF5375) C6M09_21525 PF13191 AAA ATPase domain C6M09_21525 PF00069 Protein kinase domain C6M09_21530 PF00676 Dehydrogenase E1 component C6M09_21535 PF02780 Transketolase, C-terminal domain C6M09_21535 PF02779 Transketolase, pyrimidine binding domain C6M09_21540 PF02817 e3 binding domain C6M09_21540 PF00364 Biotin-requiring enzyme C6M09_21540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C6M09_21545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6M09_21545 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_21555 PF01791 DeoC/LacD family aldolase C6M09_21565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_21565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_21575 PF01842 ACT domain C6M09_21575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6M09_21575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6M09_21580 PF03611 PTS system sugar-specific permease component C6M09_21585 PF00043 Glutathione S-transferase, C-terminal domain C6M09_21585 PF13417 Glutathione S-transferase, N-terminal domain C6M09_21590 PF13847 Methyltransferase domain C6M09_21595 PF09857 Putative toxin of bacterial toxin-antitoxin pair C6M09_21600 PF08943 CsiD C6M09_21605 PF01266 FAD dependent oxidoreductase C6M09_21610 PF00171 Aldehyde dehydrogenase family C6M09_21615 PF00202 Aminotransferase class-III C6M09_21620 PF00324 Amino acid permease C6M09_21625 PF00392 Bacterial regulatory proteins, gntR family C6M09_21625 PF07729 FCD domain C6M09_21630 PF07417 Sigma factor-binding transcriptional regulator Crl C6M09_21635 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) C6M09_21640 PF00156 Phosphoribosyl transferase domain C6M09_21645 PF07687 Peptidase dimerisation domain C6M09_21645 PF01546 Peptidase family M20/M25/M40 C6M09_21650 PF13673 Acetyltransferase (GNAT) domain C6M09_21655 PF11799 impB/mucB/samB family C-terminal domain C6M09_21655 PF00817 impB/mucB/samB family C6M09_21655 PF11798 IMS family HHH motif C6M09_21660 PF03009 Glycerophosphoryl diester phosphodiesterase family C6M09_21665 PF04400 (Na+)-NQR maturation NqrM C6M09_21670 PF00111 2Fe-2S iron-sulfur cluster binding domain C6M09_21670 PF00175 Oxidoreductase NAD-binding domain C6M09_21670 PF00970 Oxidoreductase FAD-binding domain C6M09_21675 PF02508 Rnf-Nqr subunit, membrane protein C6M09_21680 PF02508 Rnf-Nqr subunit, membrane protein C6M09_21685 PF04205 FMN-binding domain C6M09_21690 PF03116 NQR2, RnfD, RnfE family C6M09_21695 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C6M09_21695 PF11973 NQRA C-terminal domain C6M09_21700 PF03734 L,D-transpeptidase catalytic domain C6M09_21705 PF13230 Glutamine amidotransferases class-II C6M09_21710 PF13580 SIS domain C6M09_21715 PF09317 Domain of unknown function (DUF1974) C6M09_21715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C6M09_21715 PF02770 Acyl-CoA dehydrogenase, middle domain C6M09_21715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C6M09_21720 PF00795 Carbon-nitrogen hydrolase C6M09_21725 PF01810 LysE type translocator C6M09_21730 PF03466 LysR substrate binding domain C6M09_21730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_21740 PF00929 Exonuclease C6M09_21745 PF00075 RNase H C6M09_21750 PF08241 Methyltransferase domain C6M09_21755 PF16123 Hydroxyacylglutathione hydrolase C-terminus C6M09_21755 PF00753 Metallo-beta-lactamase superfamily C6M09_21760 PF01476 LysM domain C6M09_21760 PF01464 Transglycosylase SLT domain C6M09_21765 PF08241 Methyltransferase domain C6M09_21770 PF03372 Endonuclease/Exonuclease/phosphatase family C6M09_21775 PF07690 Major Facilitator Superfamily C6M09_21780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_21780 PF03466 LysR substrate binding domain C6M09_21785 PF00248 Aldo/keto reductase family C6M09_21825 PF09383 NIL domain C6M09_21825 PF00005 ABC transporter C6M09_21830 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_21835 PF03180 NLPA lipoprotein C6M09_21840 PF16358 RcsF lipoprotein C6M09_21845 PF01980 tRNA-methyltransferase O C6M09_21845 PF18389 TrmO C-terminal domain C6M09_21850 PF03129 Anticodon binding domain C6M09_21850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C6M09_21850 PF04073 Aminoacyl-tRNA editing domain C6M09_21855 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family C6M09_21860 PF04170 NlpE N-terminal domain C6M09_21860 PF17185 NlpE C-terminal OB domain C6M09_21865 PF00472 RF-1 domain C6M09_21870 PF07152 YaeQ protein C6M09_21875 PF06786 Uncharacterised protein family (UPF0253) C6M09_21880 PF07073 Modulator of Rho-dependent transcription termination (ROF) C6M09_21885 PF01171 PP-loop family C6M09_21885 PF09179 TilS substrate binding domain C6M09_21885 PF11734 TilS substrate C-terminal domain C6M09_21890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C6M09_21895 PF01276 Orn/Lys/Arg decarboxylase, major domain C6M09_21895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C6M09_21895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C6M09_21900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C6M09_21905 PF07733 Bacterial DNA polymerase III alpha NTPase domain C6M09_21905 PF01336 OB-fold nucleic acid binding domain C6M09_21905 PF02811 PHP domain C6M09_21905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C6M09_21905 PF14579 Helix-hairpin-helix motif C6M09_21910 PF01351 Ribonuclease HII C6M09_21915 PF02684 Lipid-A-disaccharide synthetase C6M09_21920 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_21920 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C6M09_21925 PF07977 FabA-like domain C6M09_21930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C6M09_21930 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_21935 PF03938 Outer membrane protein (OmpH-like) C6M09_21940 PF07244 Surface antigen variable number repeat C6M09_21940 PF01103 Surface antigen C6M09_21945 PF17820 PDZ domain C6M09_21945 PF02163 Peptidase family M50 C6M09_21955 PF01255 Putative undecaprenyl diphosphate synthase C6M09_21960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C6M09_21960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C6M09_21960 PF13288 DXP reductoisomerase C-terminal domain C6M09_21965 PF01765 Ribosome recycling factor C6M09_21970 PF00696 Amino acid kinase family C6M09_21975 PF00889 Elongation factor TS C6M09_21980 PF00318 Ribosomal protein S2 C6M09_21985 PF00557 Metallopeptidase family M24 C6M09_21990 PF01966 HD domain C6M09_21990 PF01909 Nucleotidyltransferase domain C6M09_21990 PF08335 GlnD PII-uridylyltransferase C6M09_21990 PF01842 ACT domain C6M09_21995 PF14602 Hexapeptide repeat of succinyl-transferase C6M09_21995 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C6M09_21995 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_22000 PF11944 Protein of unknown function (DUF3461) C6M09_22005 PF05651 Putative sugar diacid recognition C6M09_22005 PF17853 GGDEF-like domain C6M09_22005 PF13556 PucR C-terminal helix-turn-helix domain C6M09_22010 PF00595 PDZ domain C6M09_22015 PF01966 HD domain C6M09_22015 PF13286 Phosphohydrolase-associated domain C6M09_22020 PF01048 Phosphorylase superfamily C6M09_22025 PF01497 Periplasmic binding protein C6M09_22030 PF03458 UPF0126 domain C6M09_22035 PF01521 Iron-sulphur cluster biosynthesis C6M09_22040 PF00654 Voltage gated chloride channel C6M09_22045 PF00202 Aminotransferase class-III C6M09_22050 PF01032 FecCD transport family C6M09_22055 PF01497 Periplasmic binding protein C6M09_22060 PF00005 ABC transporter C6M09_22070 PF14814 Bifunctional transglycosylase second domain C6M09_22070 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal C6M09_22070 PF00905 Penicillin binding protein transpeptidase domain C6M09_22070 PF00912 Transglycosylase C6M09_22080 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) C6M09_22085 PF16537 Type II secretion system protein B C6M09_22090 PF17967 Pullulanase N2 domain C6M09_22090 PF03714 Bacterial pullanase-associated domain C6M09_22090 PF11852 Domain of unknown function (DUF3372) C6M09_22090 PF18494 Pullulanase Ins domain C6M09_22090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C6M09_22100 PF11356 Type II secretion system protein C C6M09_22105 PF03958 Bacterial type II/III secretion system short domain C6M09_22105 PF00263 Bacterial type II and III secretion system protein C6M09_22110 PF00437 Type II/IV secretion system protein C6M09_22115 PF00482 Type II secretion system (T2SS), protein F C6M09_22120 PF08334 Type II secretion system (T2SS), protein G C6M09_22120 PF07963 Prokaryotic N-terminal methylation motif C6M09_22125 PF07963 Prokaryotic N-terminal methylation motif C6M09_22130 PF02501 Type II secretion system (T2SS), protein I C6M09_22130 PF07963 Prokaryotic N-terminal methylation motif C6M09_22135 PF11612 Type II secretion system (T2SS), protein J C6M09_22135 PF07963 Prokaryotic N-terminal methylation motif C6M09_22140 PF03934 Type II secretion system (T2SS), protein K C6M09_22145 PF12693 GspL periplasmic domain C6M09_22145 PF05134 Type II secretion system (T2SS), protein L C6M09_22150 PF04612 Type II secretion system (T2SS), protein M C6M09_22155 PF01203 Type II secretion system (T2SS), protein N C6M09_22160 PF01478 Type IV leader peptidase family C6M09_22160 PF06750 Bacterial Peptidase A24 N-terminal domain C6M09_22165 PF00271 Helicase conserved C-terminal domain C6M09_22165 PF04408 Helicase associated domain (HA2) C6M09_22165 PF00270 DEAD/DEAH box helicase C6M09_22165 PF08482 ATP-dependent helicase C-terminal C6M09_22170 PF02834 LigT like Phosphoesterase C6M09_22175 PF03749 Sugar fermentation stimulation protein RE domain C6M09_22175 PF17746 SfsA N-terminal OB domain C6M09_22180 PF01258 Prokaryotic dksA/traR C4-type zinc finger C6M09_22185 PF00749 tRNA synthetases class I (E and Q), catalytic domain C6M09_22190 PF12627 Probable RNA and SrmB- binding site of polymerase A C6M09_22190 PF01743 Poly A polymerase head domain C6M09_22190 PF12626 Polymerase A arginine-rich C-terminus C6M09_22195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C6M09_22200 PF02548 Ketopantoate hydroxymethyltransferase C6M09_22205 PF02569 Pantoate-beta-alanine ligase C6M09_22210 PF02261 Aspartate decarboxylase C6M09_22215 PF01522 Polysaccharide deacetylase C6M09_22220 PF03610 PTS system fructose IIA component C6M09_22225 PF01061 ABC-2 type transporter C6M09_22230 PF00005 ABC transporter C6M09_22235 PF00484 Carbonic anhydrase C6M09_22240 PF00156 Phosphoribosyl transferase domain C6M09_22250 PF01011 PQQ enzyme repeat C6M09_22255 PF07732 Multicopper oxidase C6M09_22255 PF07731 Multicopper oxidase C6M09_22255 PF00394 Multicopper oxidase C6M09_22260 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) C6M09_22285 PF17284 Spermidine synthase tetramerisation domain C6M09_22290 PF02675 S-adenosylmethionine decarboxylase C6M09_22295 PF06062 Uncharacterised protein family (UPF0231) C6M09_22300 PF11791 Aconitate B N-terminal domain C6M09_22300 PF06434 Aconitate hydratase 2 N-terminus C6M09_22300 PF00330 Aconitase family (aconitate hydratase) C6M09_22305 PF11737 Protein of unknown function (DUF3300) C6M09_22320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6M09_22320 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_22325 PF02817 e3 binding domain C6M09_22325 PF00364 Biotin-requiring enzyme C6M09_22325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C6M09_22330 PF00456 Transketolase, thiamine diphosphate binding domain C6M09_22330 PF17831 Pyruvate dehydrogenase E1 component middle domain C6M09_22335 PF00392 Bacterial regulatory proteins, gntR family C6M09_22335 PF07729 FCD domain C6M09_22340 PF00324 Amino acid permease C6M09_22350 PF04616 Glycosyl hydrolases family 43 C6M09_22350 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain C6M09_22355 PF17113 Regulatory signalling modulator protein AmpE C6M09_22360 PF01510 N-acetylmuramoyl-L-alanine amidase C6M09_22365 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C6M09_22365 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C6M09_22370 PF07963 Prokaryotic N-terminal methylation motif C6M09_22375 PF00437 Type II/IV secretion system protein C6M09_22375 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C6M09_22395 PF00478 IMP dehydrogenase / GMP reductase domain C6M09_22400 PF01121 Dephospho-CoA kinase C6M09_22405 PF07072 Cell division protein C6M09_22410 PF03884 DNA gyrase inhibitor YacG C6M09_22415 PF00293 NUDIX domain C6M09_22420 PF02810 SEC-C motif C6M09_22420 PF01043 SecA preprotein cross-linking domain C6M09_22420 PF07516 SecA Wing and Scaffold domain C6M09_22420 PF07517 SecA DEAD-like domain C6M09_22425 PF06558 Secretion monitor precursor protein (SecM) C6M09_22430 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C6M09_22435 PF00091 Tubulin/FtsZ family, GTPase domain C6M09_22435 PF12327 FtsZ family, C-terminal domain C6M09_22440 PF02491 SHS2 domain inserted in FTSA C6M09_22445 PF08478 POTRA domain, FtsQ-type C6M09_22445 PF03799 Cell division protein FtsQ C6M09_22450 PF07478 D-ala D-ala ligase C-terminus C6M09_22450 PF01820 D-ala D-ala ligase N-terminus C6M09_22455 PF08245 Mur ligase middle domain C6M09_22455 PF02875 Mur ligase family, glutamate ligase domain C6M09_22455 PF01225 Mur ligase family, catalytic domain C6M09_22460 PF04101 Glycosyltransferase family 28 C-terminal domain C6M09_22460 PF03033 Glycosyltransferase family 28 N-terminal domain C6M09_22465 PF01098 Cell cycle protein C6M09_22470 PF02875 Mur ligase family, glutamate ligase domain C6M09_22470 PF08245 Mur ligase middle domain C6M09_22475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C6M09_22475 PF00953 Glycosyl transferase family 4 C6M09_22480 PF08245 Mur ligase middle domain C6M09_22480 PF01225 Mur ligase family, catalytic domain C6M09_22480 PF02875 Mur ligase family, glutamate ligase domain C6M09_22485 PF01225 Mur ligase family, catalytic domain C6M09_22485 PF02875 Mur ligase family, glutamate ligase domain C6M09_22485 PF08245 Mur ligase middle domain C6M09_22490 PF03717 Penicillin-binding Protein dimerisation domain C6M09_22490 PF00905 Penicillin binding protein transpeptidase domain C6M09_22495 PF04999 Cell division protein FtsL C6M09_22500 PF01795 MraW methylase family C6M09_22505 PF02381 MraZ protein, putative antitoxin-like C6M09_22510 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C6M09_22510 PF00356 Bacterial regulatory proteins, lacI family C6M09_22515 PF10369 Small subunit of acetolactate synthase C6M09_22520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_22520 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_22520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_22525 PF03466 LysR substrate binding domain C6M09_22525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_22535 PF08502 LeuA allosteric (dimerisation) domain C6M09_22535 PF00682 HMGL-like C6M09_22540 PF00180 Isocitrate/isopropylmalate dehydrogenase C6M09_22545 PF00330 Aconitase family (aconitate hydratase) C6M09_22550 PF00694 Aconitase C-terminal domain C6M09_22555 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_22555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C6M09_22560 PF08501 Shikimate dehydrogenase substrate binding domain C6M09_22560 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C6M09_22565 PF07690 Major Facilitator Superfamily C6M09_22570 PF01487 Type I 3-dehydroquinase C6M09_22575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_22575 PF03466 LysR substrate binding domain C6M09_22580 PF07690 Major Facilitator Superfamily C6M09_22585 PF07690 Major Facilitator Superfamily C6M09_22595 PF12793 Sugar transport-related sRNA regulator N-term C6M09_22595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6M09_22605 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_22610 PF00005 ABC transporter C6M09_22615 PF09335 SNARE associated Golgi protein C6M09_22620 PF02311 AraC-like ligand binding domain C6M09_22620 PF12833 Helix-turn-helix domain C6M09_22625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_22630 PF02610 L-arabinose isomerase C6M09_22630 PF11762 L-arabinose isomerase C-terminal domain C6M09_22635 PF00596 Class II Aldolase and Adducin N-terminal domain C6M09_22640 PF03104 DNA polymerase family B, exonuclease domain C6M09_22640 PF00136 DNA polymerase family B C6M09_22645 PF00271 Helicase conserved C-terminal domain C6M09_22645 PF18339 RapA N-terminal Tudor like domain 1 C6M09_22645 PF00176 SNF2 family N-terminal domain C6M09_22645 PF18337 RapA N-terminal Tudor like domain C6M09_22645 PF12137 RNA polymerase recycling family C-terminal C6M09_22650 PF00849 RNA pseudouridylate synthase C6M09_22655 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase C6M09_22660 PF03390 2-hydroxycarboxylate transporter family C6M09_22665 PF17203 Single cache domain 3 C6M09_22665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_22670 PF12431 Transcriptional regulator C6M09_22670 PF00072 Response regulator receiver domain C6M09_22675 PF00226 DnaJ domain C6M09_22675 PF05099 Tellurite resistance protein TerB C6M09_22680 PF04453 LPS transport system D C6M09_22680 PF03968 OstA-like protein C6M09_22685 PF00639 PPIC-type PPIASE domain C6M09_22685 PF09312 SurA N-terminal domain C6M09_22690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C6M09_22695 PF00398 Ribosomal RNA adenine dimethylase C6M09_22700 PF04379 ApaG domain C6M09_22705 PF00149 Calcineurin-like phosphoesterase C6M09_22710 PF00186 Dihydrofolate reductase C6M09_22715 PF00999 Sodium/hydrogen exchanger family C6M09_22715 PF02254 TrkA-N domain C6M09_22720 PF02525 Flavodoxin-like fold C6M09_22725 PF06004 Bacterial protein of unknown function (DUF903) C6M09_22730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C6M09_22730 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C6M09_22730 PF02142 MGS-like domain C6M09_22735 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C6M09_22735 PF00117 Glutamine amidotransferase class-I C6M09_22740 PF01113 Dihydrodipicolinate reductase, N-terminus C6M09_22740 PF05173 Dihydrodipicolinate reductase, C-terminus C6M09_22745 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C6M09_22750 PF04223 Citrate lyase, alpha subunit (CitF) C6M09_22755 PF03328 HpcH/HpaI aldolase/citrate lyase family C6M09_22760 PF06857 Malonate decarboxylase delta subunit (MdcD) C6M09_22765 PF00583 Acetyltransferase (GNAT) family C6M09_22765 PF08218 Citrate lyase ligase C-terminal domain C6M09_22770 PF03390 2-hydroxycarboxylate transporter family C6M09_22775 PF04277 Oxaloacetate decarboxylase, gamma chain C6M09_22780 PF00682 HMGL-like C6M09_22780 PF00364 Biotin-requiring enzyme C6M09_22780 PF02436 Conserved carboxylase domain C6M09_22785 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C6M09_22790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_22790 PF17203 Single cache domain 3 C6M09_22795 PF12431 Transcriptional regulator C6M09_22795 PF00072 Response regulator receiver domain C6M09_22800 PF02272 DHHA1 domain C6M09_22800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C6M09_22800 PF01411 tRNA synthetases class II (A) C6M09_22805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_22805 PF03466 LysR substrate binding domain C6M09_22815 PF01156 Inosine-uridine preferring nucleoside hydrolase C6M09_22820 PF02401 LytB protein C6M09_22825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C6M09_22830 PF01252 Signal peptidase (SPase) II C6M09_22835 PF06827 Zinc finger found in FPG and IleRS C6M09_22835 PF00133 tRNA synthetases class I (I, L, M and V) C6M09_22835 PF08264 Anticodon-binding domain of tRNA C6M09_22840 PF01687 Riboflavin kinase C6M09_22840 PF06574 FAD synthetase C6M09_22845 PF01649 Ribosomal protein S20 C6M09_22850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_22850 PF03466 LysR substrate binding domain C6M09_22855 PF06965 Na+/H+ antiporter 1 C6M09_22860 PF01556 DnaJ C terminal domain C6M09_22860 PF00684 DnaJ central domain C6M09_22860 PF00226 DnaJ domain C6M09_22865 PF00012 Hsp70 protein C6M09_22870 PF10807 Protein of unknown function (DUF2541) C6M09_22875 PF03981 Ubiquinol-cytochrome C chaperone C6M09_22875 PF13099 Domain of unknown function (DUF3944) C6M09_22880 PF01184 GPR1/FUN34/yaaH family C6M09_22885 PF07690 Major Facilitator Superfamily C6M09_22890 PF00994 Probable molybdopterin binding domain C6M09_22895 PF00923 Transaldolase/Fructose-6-phosphate aldolase C6M09_22900 PF01235 Sodium:alanine symporter family C6M09_22905 PF03883 Peroxide stress protein YaaA C6M09_22915 PF14821 Threonine synthase N terminus C6M09_22915 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_22920 PF08544 GHMP kinases C terminal C6M09_22920 PF00288 GHMP kinases N terminal domain C6M09_22925 PF00742 Homoserine dehydrogenase C6M09_22925 PF13840 ACT domain C6M09_22925 PF01842 ACT domain C6M09_22925 PF03447 Homoserine dehydrogenase, NAD binding domain C6M09_22925 PF00696 Amino acid kinase family C6M09_22930 PF08254 Threonine leader peptide C6M09_22935 PF00588 SpoU rRNA Methylase family C6M09_22945 PF00072 Response regulator receiver domain C6M09_22945 PF00486 Transcriptional regulatory protein, C terminal C6M09_22950 PF06123 Inner membrane protein CreD C6M09_22955 PF00672 HAMP domain C6M09_22955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_22955 PF00512 His Kinase A (phospho-acceptor) domain C6M09_22960 PF00072 Response regulator receiver domain C6M09_22960 PF00486 Transcriptional regulatory protein, C terminal C6M09_22965 PF05981 CreA protein C6M09_22970 PF06445 GyrI-like small molecule binding domain C6M09_22970 PF12833 Helix-turn-helix domain C6M09_22975 PF00300 Histidine phosphatase superfamily (branch 1) C6M09_22980 PF01931 Protein of unknown function DUF84 C6M09_22985 PF01371 Trp repressor protein C6M09_22990 PF14718 Soluble lytic murein transglycosylase L domain C6M09_22990 PF01464 Transglycosylase SLT domain C6M09_22995 PF00005 ABC transporter C6M09_22995 PF12848 ABC transporter C6M09_23000 PF13521 AAA domain C6M09_23000 PF01381 Helix-turn-helix C6M09_23005 PF18073 Rubredoxin metal binding domain C6M09_23010 PF18429 Domain of unknown function (DUF5609) C6M09_23015 PF10144 Bacterial virulence factor haemolysin C6M09_23020 PF03099 Biotin/lipoate A/B protein ligase family C6M09_23020 PF10437 Bacterial lipoate protein ligase C-terminus C6M09_23025 PF01048 Phosphorylase superfamily C6M09_23030 PF01676 Metalloenzyme superfamily C6M09_23035 PF00591 Glycosyl transferase family, a/b domain C6M09_23035 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C6M09_23035 PF02885 Glycosyl transferase family, helical bundle domain C6M09_23040 PF01791 DeoC/LacD family aldolase C6M09_23045 PF07670 Nucleoside recognition C6M09_23045 PF07662 Na+ dependent nucleoside transporter C-terminus C6M09_23045 PF01773 Na+ dependent nucleoside transporter N-terminus C6M09_23050 PF01026 TatD related DNase C6M09_23055 PF01734 Patatin-like phospholipase C6M09_23060 PF07043 Protein of unknown function (DUF1328) C6M09_23065 PF04972 BON domain C6M09_23070 PF16658 Class II release factor RF3, C-terminal domain C6M09_23070 PF00009 Elongation factor Tu GTP binding domain C6M09_23070 PF03144 Elongation factor Tu domain 2 C6M09_23075 PF13419 Haloacid dehalogenase-like hydrolase C6M09_23080 PF00583 Acetyltransferase (GNAT) family C6M09_23085 PF03603 DNA polymerase III psi subunit C6M09_23090 PF08468 Methyltransferase small domain N-terminal C6M09_23090 PF05175 Methyltransferase small domain C6M09_23110 PF07256 Protein of unknown function (DUF1435) C6M09_23120 PF00990 Diguanylate cyclase, GGDEF domain C6M09_23125 PF11575 FhuF 2Fe-2S C-terminal domain C6M09_23125 PF06276 Ferric iron reductase FhuF-like transporter C6M09_23130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_23130 PF02378 Phosphotransferase system, EIIC C6M09_23135 PF04073 Aminoacyl-tRNA editing domain C6M09_23140 PF00196 Bacterial regulatory proteins, luxR family C6M09_23145 PF00196 Bacterial regulatory proteins, luxR family C6M09_23155 PF01494 FAD binding domain C6M09_23160 PF06738 Putative threonine/serine exporter C6M09_23165 PF12821 Threonine/Serine exporter, ThrE C6M09_23170 PF17948 DnaT DNA-binding domain C6M09_23175 PF01695 IstB-like ATP binding protein C6M09_23180 PF10696 Protein of unknown function (DUF2501) C6M09_23185 PF00884 Sulfatase C6M09_23190 PF04754 Putative transposase, YhgA-like C6M09_23195 PF01380 SIS domain C6M09_23200 PF01380 SIS domain C6M09_23205 PF03613 PTS system mannose/fructose/sorbose family IID component C6M09_23210 PF03609 PTS system sorbose-specific iic component C6M09_23215 PF03830 PTS system sorbose subfamily IIB component C6M09_23220 PF03830 PTS system sorbose subfamily IIB component C6M09_23220 PF03610 PTS system fructose IIA component C6M09_23225 PF00158 Sigma-54 interaction domain C6M09_23225 PF03610 PTS system fructose IIA component C6M09_23225 PF00874 PRD domain C6M09_23230 PF01232 Mannitol dehydrogenase Rossmann domain C6M09_23230 PF08125 Mannitol dehydrogenase C-terminal domain C6M09_23235 PF00107 Zinc-binding dehydrogenase C6M09_23235 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_23240 PF07729 FCD domain C6M09_23240 PF00392 Bacterial regulatory proteins, gntR family C6M09_23245 PF07690 Major Facilitator Superfamily C6M09_23250 PF00583 Acetyltransferase (GNAT) family C6M09_23250 PF00814 Glycoprotease family C6M09_23255 PF00583 Acetyltransferase (GNAT) family C6M09_23260 PF01380 SIS domain C6M09_23260 PF01418 Helix-turn-helix domain, rpiR family C6M09_23265 PF01081 KDPG and KHG aldolase C6M09_23270 PF05035 2-keto-3-deoxy-galactonokinase C6M09_23285 PF07969 Amidohydrolase family C6M09_23300 PF02615 Malate/L-lactate dehydrogenase C6M09_23315 PF01047 MarR family C6M09_23325 PF01557 Fumarylacetoacetate (FAA) hydrolase family C6M09_23330 PF01557 Fumarylacetoacetate (FAA) hydrolase family C6M09_23335 PF00171 Aldehyde dehydrogenase family C6M09_23340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C6M09_23345 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase C6M09_23350 PF01557 Fumarylacetoacetate (FAA) hydrolase family C6M09_23355 PF03328 HpcH/HpaI aldolase/citrate lyase family C6M09_23360 PF07690 Major Facilitator Superfamily C6M09_23365 PF12833 Helix-turn-helix domain C6M09_23370 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal C6M09_23370 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal C6M09_23375 PF01613 Flavin reductase like domain C6M09_23390 PF13722 5TM C-terminal transporter carbon starvation CstA C6M09_23390 PF02554 Carbon starvation protein CstA C6M09_23395 PF04328 Selenoprotein, putative C6M09_23400 PF02492 CobW/HypB/UreG, nucleotide-binding domain C6M09_23400 PF07683 Cobalamin synthesis protein cobW C-terminal domain C6M09_23410 PF00171 Aldehyde dehydrogenase family C6M09_23415 PF04754 Putative transposase, YhgA-like C6M09_23420 PF02311 AraC-like ligand binding domain C6M09_23420 PF12833 Helix-turn-helix domain C6M09_23430 PF04286 Protein of unknown function (DUF445) C6M09_23435 PF07690 Major Facilitator Superfamily C6M09_23445 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C6M09_23450 PF01869 BadF/BadG/BcrA/BcrD ATPase family C6M09_23455 PF11823 Protein of unknown function (DUF3343) C6M09_23465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_23465 PF00529 HlyD membrane-fusion protein of T1SS C6M09_23475 PF06568 Domain of unknown function (DUF1127) C6M09_23480 PF00155 Aminotransferase class I and II C6M09_23480 PF00392 Bacterial regulatory proteins, gntR family C6M09_23485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C6M09_23490 PF03466 LysR substrate binding domain C6M09_23490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_23495 PF02525 Flavodoxin-like fold C6M09_23500 PF02653 Branched-chain amino acid transport system / permease component C6M09_23505 PF02653 Branched-chain amino acid transport system / permease component C6M09_23510 PF00005 ABC transporter C6M09_23515 PF13407 Periplasmic binding protein domain C6M09_23520 PF00579 tRNA synthetases class I (W and Y) C6M09_23525 PF13533 Biotin-lipoyl like C6M09_23530 PF00005 ABC transporter C6M09_23565 PF08007 Cupin superfamily protein C6M09_23580 PF00672 HAMP domain C6M09_23580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_23580 PF00512 His Kinase A (phospho-acceptor) domain C6M09_23585 PF00072 Response regulator receiver domain C6M09_23585 PF00486 Transcriptional regulatory protein, C terminal C6M09_23590 PF02321 Outer membrane efflux protein C6M09_23595 PF11604 Copper binding periplasmic protein CusF C6M09_23600 PF00529 HlyD membrane-fusion protein of T1SS C6M09_23600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_23605 PF00873 AcrB/AcrD/AcrF family C6M09_23615 PF08212 Lipocalin-like domain C6M09_23620 PF13411 MerR HTH family regulatory protein C6M09_23630 PF00106 short chain dehydrogenase C6M09_23665 PF08349 Protein of unknown function (DUF1722) C6M09_23670 PF02264 LamB porin C6M09_23685 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C6M09_23685 PF04616 Glycosyl hydrolases family 43 C6M09_23740 PF17345 Family of unknown function (DUF5375) C6M09_23765 PF04606 Ogr/Delta-like zinc finger C6M09_23790 PF01609 Transposase DDE domain C6M09_23790 PF05598 Transposase domain (DUF772) C6M09_23805 PF01609 Transposase DDE domain C6M09_23805 PF05598 Transposase domain (DUF772) C6M09_23820 PF00484 Carbonic anhydrase C6M09_23825 PF01740 STAS domain C6M09_23825 PF00916 Sulfate permease family C6M09_23830 PF00107 Zinc-binding dehydrogenase C6M09_23830 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_23835 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_23840 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_23845 PF00149 Calcineurin-like phosphoesterase C6M09_23850 PF00005 ABC transporter C6M09_23850 PF17912 MalK OB fold domain C6M09_23855 PF13416 Bacterial extracellular solute-binding protein C6M09_23860 PF01261 Xylose isomerase-like TIM barrel C6M09_23865 PF01261 Xylose isomerase-like TIM barrel C6M09_23870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6M09_23870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6M09_23875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_23875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_23875 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_23880 PF00294 pfkB family carbohydrate kinase C6M09_23885 PF02685 Glucokinase C6M09_23885 PF01418 Helix-turn-helix domain, rpiR family C6M09_23885 PF01380 SIS domain C6M09_23890 PF04962 KduI/IolB family C6M09_23895 PF00171 Aldehyde dehydrogenase family C6M09_23905 PF05872 Bacterial protein of unknown function (DUF853) C6M09_23910 PF03739 Lipopolysaccharide export system permease LptF/LptG C6M09_23915 PF03739 Lipopolysaccharide export system permease LptF/LptG C6M09_23920 PF02789 Cytosol aminopeptidase family, N-terminal domain C6M09_23920 PF00883 Cytosol aminopeptidase family, catalytic domain C6M09_23925 PF04364 DNA polymerase III chi subunit, HolC C6M09_23930 PF00133 tRNA synthetases class I (I, L, M and V) C6M09_23930 PF10458 Valyl tRNA synthetase tRNA binding arm C6M09_23930 PF08264 Anticodon-binding domain of tRNA C6M09_23935 PF00583 Acetyltransferase (GNAT) family C6M09_23940 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C6M09_23945 PF06877 Regulator of ribonuclease activity B C6M09_23950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C6M09_23950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C6M09_23955 PF00392 Bacterial regulatory proteins, gntR family C6M09_23955 PF07702 UTRA domain C6M09_23960 PF03606 C4-dicarboxylate anaerobic carrier C6M09_23965 PF01979 Amidohydrolase family C6M09_23970 PF00294 pfkB family carbohydrate kinase C6M09_23975 PF01380 SIS domain C6M09_23980 PF04074 YhcH/YjgK/YiaL C6M09_23990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C6M09_23990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C6M09_23995 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C6M09_23995 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C6M09_24000 PF01042 Endoribonuclease L-PSP C6M09_24005 PF00690 Cation transporter/ATPase, N-terminus C6M09_24005 PF00689 Cation transporting ATPase, C-terminus C6M09_24010 PF00356 Bacterial regulatory proteins, lacI family C6M09_24015 PF02378 Phosphotransferase system, EIIC C6M09_24015 PF00367 phosphotransferase system, EIIB C6M09_24020 PF00128 Alpha amylase, catalytic domain C6M09_24020 PF11941 Domain of unknown function (DUF3459) C6M09_24025 PF02378 Phosphotransferase system, EIIC C6M09_24030 PF02056 Family 4 glycosyl hydrolase C6M09_24030 PF11975 Family 4 glycosyl hydrolase C-terminal domain C6M09_24035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_24050 PF13597 Anaerobic ribonucleoside-triphosphate reductase C6M09_24050 PF03477 ATP cone domain C6M09_24060 PF05016 ParE toxin of type II toxin-antitoxin system, parDE C6M09_24065 PF04221 RelB antitoxin C6M09_24070 PF00874 PRD domain C6M09_24070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_24070 PF08279 HTH domain C6M09_24070 PF05043 Mga helix-turn-helix domain C6M09_24075 PF10282 Lactonase, 7-bladed beta-propeller C6M09_24080 PF07071 KDGP aldolase C6M09_24085 PF03841 L-seryl-tRNA selenium transferase C6M09_24090 PF01979 Amidohydrolase family C6M09_24125 PF07361 Cytochrome b562 C6M09_24130 PF01523 Putative modulator of DNA gyrase C6M09_24135 PF04751 Protein of unknown function (DUF615) C6M09_24155 PF01225 Mur ligase family, catalytic domain C6M09_24155 PF08245 Mur ligase middle domain C6M09_24155 PF02875 Mur ligase family, glutamate ligase domain C6M09_24160 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C6M09_24165 PF02653 Branched-chain amino acid transport system / permease component C6M09_24170 PF02653 Branched-chain amino acid transport system / permease component C6M09_24175 PF00005 ABC transporter C6M09_24180 PF13407 Periplasmic binding protein domain C6M09_24185 PF00719 Inorganic pyrophosphatase C6M09_24200 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like C6M09_24205 PF04357 TamB, inner membrane protein subunit of TAM complex C6M09_24210 PF07244 Surface antigen variable number repeat C6M09_24210 PF17243 POTRA domain TamA domain 1 C6M09_24210 PF01103 Surface antigen C6M09_24215 PF01625 Peptide methionine sulfoxide reductase C6M09_24220 PF01595 Cyclin M transmembrane N-terminal domain C6M09_24220 PF00571 CBS domain C6M09_24220 PF03471 Transporter associated domain C6M09_24230 PF06526 Protein of unknown function (DUF1107) C6M09_24235 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C6M09_24240 PF00459 Inositol monophosphatase family C6M09_24245 PF00149 Calcineurin-like phosphoesterase C6M09_24245 PF02872 5'-nucleotidase, C-terminal domain C6M09_24250 PF01638 HxlR-like helix-turn-helix C6M09_24255 PF05368 NmrA-like family C6M09_24260 PF12833 Helix-turn-helix domain C6M09_24265 PF00892 EamA-like transporter family C6M09_24270 PF04405 Domain of Unknown function (DUF542) C6M09_24270 PF01814 Hemerythrin HHE cation binding domain C6M09_24275 PF00324 Amino acid permease C6M09_24280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C6M09_24280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C6M09_24285 PF04225 Opacity-associated protein A LysM-like domain C6M09_24285 PF08525 Opacity-associated protein A N-terminal motif C6M09_24290 PF01281 Ribosomal protein L9, N-terminal domain C6M09_24290 PF03948 Ribosomal protein L9, C-terminal domain C6M09_24295 PF01084 Ribosomal protein S18 C6M09_24300 PF00436 Single-strand binding protein family C6M09_24305 PF01250 Ribosomal protein S6 C6M09_24310 PF07338 Protein of unknown function (DUF1471) C6M09_24315 PF07690 Major Facilitator Superfamily C6M09_24320 PF00596 Class II Aldolase and Adducin N-terminal domain C6M09_24325 PF01261 Xylose isomerase-like TIM barrel C6M09_24330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C6M09_24335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_24340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_24345 PF03611 PTS system sugar-specific permease component C6M09_24355 PF00455 DeoR C terminal sensor domain C6M09_24355 PF08220 DeoR-like helix-turn-helix domain C6M09_24360 PF00326 Prolyl oligopeptidase family C6M09_24365 PF07338 Protein of unknown function (DUF1471) C6M09_24370 PF07338 Protein of unknown function (DUF1471) C6M09_24375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C6M09_24375 PF18158 Adaptive response protein AidB N-terminal domain C6M09_24375 PF02770 Acyl-CoA dehydrogenase, middle domain C6M09_24380 PF00588 SpoU rRNA Methylase family C6M09_24380 PF08032 RNA 2'-O ribose methyltransferase substrate binding C6M09_24385 PF17876 Cold shock domain C6M09_24385 PF00773 RNB domain C6M09_24385 PF08461 Ribonuclease R winged-helix domain C6M09_24385 PF00575 S1 RNA binding domain C6M09_24385 PF08206 Ribonuclease B OB domain C6M09_24390 PF02082 Transcriptional regulator C6M09_24395 PF00709 Adenylosuccinate synthetase C6M09_24400 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C6M09_24410 PF01145 SPFH domain / Band 7 family C6M09_24415 PF01145 SPFH domain / Band 7 family C6M09_24415 PF12221 Bacterial membrane protein N terminal C6M09_24420 PF16360 GTP-binding GTPase Middle Region C6M09_24420 PF01926 50S ribosome-binding GTPase C6M09_24420 PF13167 GTP-binding GTPase N-terminal C6M09_24425 PF17209 Hfq protein C6M09_24435 PF01119 DNA mismatch repair protein, C-terminal domain C6M09_24435 PF08676 MutL C terminal dimerisation domain C6M09_24440 PF01520 N-acetylmuramoyl-L-alanine amidase C6M09_24445 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C6M09_24450 PF03853 YjeF-related protein N-terminus C6M09_24450 PF01256 Carbohydrate kinase C6M09_24455 PF08331 Domain of unknown function (DUF1730) C6M09_24475 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6M09_24480 PF00929 Exonuclease C6M09_24485 PF03193 RsgA GTPase C6M09_24490 PF02666 Phosphatidylserine decarboxylase C6M09_24495 PF12794 Mechanosensitive ion channel inner membrane domain 1 C6M09_24495 PF12795 Mechanosensitive ion channel porin domain C6M09_24495 PF00924 Mechanosensitive ion channel C6M09_24500 PF13520 Amino acid permease C6M09_24505 PF00152 tRNA synthetases class II (D, K and N) C6M09_24510 PF00890 FAD binding domain C6M09_24510 PF02910 Fumarate reductase flavoprotein C-term C6M09_24515 PF13183 4Fe-4S dicluster domain C6M09_24515 PF13085 2Fe-2S iron-sulfur cluster binding domain C6M09_24520 PF02300 Fumarate reductase subunit C C6M09_24525 PF02313 Fumarate reductase subunit D C6M09_24530 PF08212 Lipocalin-like domain C6M09_24535 PF00893 Small Multidrug Resistance protein C6M09_24540 PF08085 Entericidin EcnA/B family C6M09_24550 PF01132 Elongation factor P (EF-P) OB domain C6M09_24550 PF08207 Elongation factor P (EF-P) KOW-like domain C6M09_24550 PF09285 Elongation factor P, C-terminal C6M09_24555 PF04055 Radical SAM superfamily C6M09_24570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_24570 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_24575 PF00577 Outer membrane usher protein C6M09_24575 PF13953 PapC C-terminal domain C6M09_24575 PF13954 PapC N-terminal domain C6M09_24595 PF00529 HlyD membrane-fusion protein of T1SS C6M09_24595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C6M09_24610 PF13698 Domain of unknown function (DUF4156) C6M09_24615 PF00118 TCP-1/cpn60 chaperonin family C6M09_24620 PF00166 Chaperonin 10 Kd subunit C6M09_24625 PF13520 Amino acid permease C6M09_24630 PF04186 FxsA cytoplasmic membrane protein C6M09_24635 PF00206 Lyase C6M09_24635 PF10415 Fumarase C C-terminus C6M09_24640 PF03605 Anaerobic c4-dicarboxylate membrane transporter C6M09_24645 PF03091 CutA1 divalent ion tolerance protein C6M09_24650 PF11412 Disulphide bond corrector protein DsbC C6M09_24650 PF02683 Cytochrome C biogenesis protein transmembrane region C6M09_24690 PF14883 Hypothetical glycosyl hydrolase family 13 C6M09_24690 PF01522 Polysaccharide deacetylase C6M09_24695 PF00535 Glycosyl transferase family 2 C6M09_24710 PF03741 Integral membrane protein TerC family C6M09_24720 PF01556 DnaJ C terminal domain C6M09_24720 PF00226 DnaJ domain C6M09_24740 PF06406 StbA protein C6M09_24755 PF11975 Family 4 glycosyl hydrolase C-terminal domain C6M09_24755 PF02056 Family 4 glycosyl hydrolase C6M09_24760 PF12833 Helix-turn-helix domain C6M09_24765 PF08946 Osmosensory transporter coiled coil C6M09_24765 PF00083 Sugar (and other) transporter C6M09_24770 PF03831 PhnA domain C6M09_24770 PF08274 PhnA Zinc-Ribbon C6M09_24775 PF06983 3-demethylubiquinone-9 3-methyltransferase C6M09_24780 PF07702 UTRA domain C6M09_24780 PF00392 Bacterial regulatory proteins, gntR family C6M09_24785 PF06754 Phosphonate metabolism protein PhnG C6M09_24790 PF05845 Bacterial phosphonate metabolism protein (PhnH) C6M09_24795 PF05861 Bacterial phosphonate metabolism protein (PhnI) C6M09_24800 PF06007 Phosphonate metabolism protein PhnJ C6M09_24805 PF00005 ABC transporter C6M09_24810 PF00005 ABC transporter C6M09_24815 PF07969 Amidohydrolase family C6M09_24825 PF12706 Beta-lactamase superfamily domain C6M09_24835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_24835 PF13426 PAS domain C6M09_24835 PF00072 Response regulator receiver domain C6M09_24840 PF00005 ABC transporter C6M09_24845 PF02653 Branched-chain amino acid transport system / permease component C6M09_24850 PF13407 Periplasmic binding protein domain C6M09_24870 PF00486 Transcriptional regulatory protein, C terminal C6M09_24870 PF00072 Response regulator receiver domain C6M09_24880 PF08238 Sel1 repeat C6M09_24885 PF00375 Sodium:dicarboxylate symporter family C6M09_24895 PF16177 Acetyl-coenzyme A synthetase N-terminus C6M09_24895 PF00501 AMP-binding enzyme C6M09_24895 PF13193 AMP-binding enzyme C-terminal domain C6M09_24900 PF04341 Protein of unknown function, DUF485 C6M09_24905 PF00474 Sodium:solute symporter family C6M09_24920 PF13954 PapC N-terminal domain C6M09_24920 PF13953 PapC C-terminal domain C6M09_24920 PF00577 Outer membrane usher protein C6M09_24925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C6M09_24925 PF02753 Pili assembly chaperone PapD, C-terminal domain C6M09_24930 PF00419 Fimbrial protein C6M09_24935 PF04172 LrgB-like family C6M09_24940 PF03788 LrgA family C6M09_24945 PF03466 LysR substrate binding domain C6M09_24945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_24950 PF00999 Sodium/hydrogen exchanger family C6M09_24955 PF00860 Permease family C6M09_24960 PF00043 Glutathione S-transferase, C-terminal domain C6M09_24960 PF02798 Glutathione S-transferase, N-terminal domain C6M09_24965 PF00376 MerR family regulatory protein C6M09_24965 PF09278 MerR, DNA binding C6M09_24970 PF12833 Helix-turn-helix domain C6M09_24975 PF12792 CSS motif domain associated with EAL C6M09_24975 PF00563 EAL domain C6M09_24980 PF15940 Family of unknown function C6M09_24985 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_25000 PF08402 TOBE domain C6M09_25000 PF00005 ABC transporter C6M09_25005 PF12706 Beta-lactamase superfamily domain C6M09_25005 PF00753 Metallo-beta-lactamase superfamily C6M09_25010 PF00356 Bacterial regulatory proteins, lacI family C6M09_25015 PF00459 Inositol monophosphatase family C6M09_25025 PF01103 Surface antigen C6M09_25025 PF07244 Surface antigen variable number repeat C6M09_25035 PF07519 Tannase and feruloyl esterase C6M09_25040 PF12833 Helix-turn-helix domain C6M09_25045 PF07715 TonB-dependent Receptor Plug Domain C6M09_25045 PF00593 TonB dependent receptor C6M09_25050 PF05598 Transposase domain (DUF772) C6M09_25050 PF01609 Transposase DDE domain C6M09_25055 PF01464 Transglycosylase SLT domain C6M09_25060 PF00436 Single-strand binding protein family C6M09_25065 PF00005 ABC transporter C6M09_25065 PF17755 UvrA DNA-binding domain C6M09_25065 PF17760 UvrA interaction domain C6M09_25070 PF04237 YjbR C6M09_25075 PF01894 Uncharacterised protein family UPF0047 C6M09_25080 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C6M09_25085 PF00155 Aminotransferase class I and II C6M09_25090 PF00842 Alanine racemase, C-terminal domain C6M09_25090 PF01168 Alanine racemase, N-terminal domain C6M09_25095 PF00772 DnaB-like helicase N terminal domain C6M09_25095 PF03796 DnaB-like helicase C terminal domain C6M09_25100 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_25100 PF00107 Zinc-binding dehydrogenase C6M09_25105 PF09583 Phage shock protein G (Phageshock_PspG) C6M09_25110 PF01207 Dihydrouridine synthase (Dus) C6M09_25120 PF01475 Ferric uptake regulator family C6M09_25125 PF05532 CsbD-like C6M09_25135 PF01554 MatE C6M09_25140 PF01726 LexA DNA binding domain C6M09_25140 PF00717 Peptidase S24-like C6M09_25145 PF01219 Prokaryotic diacylglycerol kinase C6M09_25150 PF01553 Acyltransferase C6M09_25155 PF01040 UbiA prenyltransferase family C6M09_25160 PF04345 Chorismate lyase C6M09_25165 PF07148 Maltose operon periplasmic protein precursor (MalM) C6M09_25170 PF02264 LamB porin C6M09_25175 PF00005 ABC transporter C6M09_25175 PF17912 MalK OB fold domain C6M09_25180 PF01547 Bacterial extracellular solute-binding protein C6M09_25185 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_25185 PF14785 Maltose transport system permease protein MalF P2 domain C6M09_25190 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_25195 PF06146 Phosphate-starvation-inducible E C6M09_25200 PF03313 Serine dehydratase alpha chain C6M09_25215 PF01042 Endoribonuclease L-PSP C6M09_25225 PF12804 MobA-like NTP transferase domain C6M09_25225 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_25225 PF14602 Hexapeptide repeat of succinyl-transferase C6M09_25230 PF00342 Phosphoglucose isomerase C6M09_25235 PF01842 ACT domain C6M09_25235 PF00696 Amino acid kinase family C6M09_25240 PF01758 Sodium Bile acid symporter family C6M09_25245 PF11656 YjbD family (DUF3811) C6M09_25250 PF01479 S4 domain C6M09_25250 PF00849 RNA pseudouridylate synthase C6M09_25255 PF04198 Putative sugar-binding domain C6M09_25255 PF13936 Helix-turn-helix domain C6M09_25260 PF00106 short chain dehydrogenase C6M09_25265 PF03610 PTS system fructose IIA component C6M09_25270 PF03830 PTS system sorbose subfamily IIB component C6M09_25275 PF03609 PTS system sorbose-specific iic component C6M09_25280 PF03613 PTS system mannose/fructose/sorbose family IID component C6M09_25285 PF00107 Zinc-binding dehydrogenase C6M09_25285 PF08240 Alcohol dehydrogenase GroES-like domain C6M09_25290 PF08501 Shikimate dehydrogenase substrate binding domain C6M09_25295 PF02690 Na+/Pi-cotransporter C6M09_25300 PF02965 Vitamin B12 dependent methionine synthase, activation domain C6M09_25300 PF02574 Homocysteine S-methyltransferase C6M09_25300 PF02310 B12 binding domain C6M09_25300 PF02607 B12 binding domain C6M09_25300 PF00809 Pterin binding enzyme C6M09_25305 PF01614 Bacterial transcriptional regulator C6M09_25305 PF09339 IclR helix-turn-helix domain C6M09_25310 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C6M09_25315 PF00463 Isocitrate lyase family C6M09_25320 PF01274 Malate synthase C6M09_25325 PF04204 Homoserine O-succinyltransferase C6M09_25330 PF13673 Acetyltransferase (GNAT) domain C6M09_25355 PF02142 MGS-like domain C6M09_25355 PF01808 AICARFT/IMPCHase bienzyme C6M09_25360 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C6M09_25360 PF02843 Phosphoribosylglycinamide synthetase, C domain C6M09_25360 PF02844 Phosphoribosylglycinamide synthetase, N domain C6M09_25365 PF00158 Sigma-54 interaction domain C6M09_25365 PF00072 Response regulator receiver domain C6M09_25365 PF02954 Bacterial regulatory protein, Fis family C6M09_25370 PF00512 His Kinase A (phospho-acceptor) domain C6M09_25370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_25375 PF13801 Heavy-metal resistance C6M09_25380 PF07356 Protein of unknown function (DUF1481) C6M09_25385 PF00216 Bacterial DNA-binding protein C6M09_25390 PF04222 Protein of unknown function (DUF416) C6M09_25395 PF04493 Endonuclease V C6M09_25400 PF01208 Uroporphyrinogen decarboxylase (URO-D) C6M09_25405 PF09297 NADH pyrophosphatase zinc ribbon domain C6M09_25405 PF00293 NUDIX domain C6M09_25410 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C6M09_25415 PF01964 Radical SAM ThiC family C6M09_25415 PF13667 ThiC-associated domain C6M09_25420 PF02581 Thiamine monophosphate synthase C6M09_25425 PF00899 ThiF family C6M09_25430 PF02597 ThiS family C6M09_25435 PF05690 Thiazole biosynthesis protein ThiG C6M09_25440 PF06968 Biotin and Thiamin Synthesis associated domain C6M09_25440 PF04055 Radical SAM superfamily C6M09_25445 PF00990 Diguanylate cyclase, GGDEF domain C6M09_25450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6M09_25455 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C6M09_25460 PF03605 Anaerobic c4-dicarboxylate membrane transporter C6M09_25465 PF04997 RNA polymerase Rpb1, domain 1 C6M09_25465 PF04998 RNA polymerase Rpb1, domain 5 C6M09_25465 PF05000 RNA polymerase Rpb1, domain 4 C6M09_25465 PF04983 RNA polymerase Rpb1, domain 3 C6M09_25465 PF00623 RNA polymerase Rpb1, domain 2 C6M09_25470 PF04565 RNA polymerase Rpb2, domain 3 C6M09_25470 PF10385 RNA polymerase beta subunit external 1 domain C6M09_25470 PF00562 RNA polymerase Rpb2, domain 6 C6M09_25470 PF04560 RNA polymerase Rpb2, domain 7 C6M09_25470 PF04563 RNA polymerase beta subunit C6M09_25470 PF04561 RNA polymerase Rpb2, domain 2 C6M09_25475 PF00542 Ribosomal protein L7/L12 C-terminal domain C6M09_25475 PF16320 Ribosomal protein L7/L12 dimerisation domain C6M09_25480 PF00466 Ribosomal protein L10 C6M09_25485 PF00687 Ribosomal protein L1p/L10e family C6M09_25490 PF03946 Ribosomal protein L11, N-terminal domain C6M09_25490 PF00298 Ribosomal protein L11, RNA binding domain C6M09_25495 PF00467 KOW motif C6M09_25495 PF02357 Transcription termination factor nusG C6M09_25500 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C6M09_25505 PF03144 Elongation factor Tu domain 2 C6M09_25505 PF03143 Elongation factor Tu C-terminal domain C6M09_25505 PF00009 Elongation factor Tu GTP binding domain C6M09_25530 PF00485 Phosphoribulokinase / Uridine kinase family C6M09_25535 PF03099 Biotin/lipoate A/B protein ligase family C6M09_25535 PF02237 Biotin protein ligase C terminal domain C6M09_25535 PF08279 HTH domain C6M09_25540 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C6M09_25540 PF01565 FAD binding domain C6M09_25570 PF12724 Flavodoxin domain C6M09_25575 PF02386 Cation transport protein C6M09_25580 PF09186 Domain of unknown function (DUF1949) C6M09_25580 PF01205 Uncharacterized protein family UPF0029 C6M09_25585 PF00557 Metallopeptidase family M24 C6M09_25590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C6M09_25590 PF00378 Enoyl-CoA hydratase/isomerase C6M09_25590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C6M09_25595 PF02803 Thiolase, C-terminal domain C6M09_25595 PF00108 Thiolase, N-terminal domain C6M09_25600 PF00970 Oxidoreductase FAD-binding domain C6M09_25600 PF00175 Oxidoreductase NAD-binding domain C6M09_25605 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C6M09_25610 PF02357 Transcription termination factor nusG C6M09_25615 PF01026 TatD related DNase C6M09_25620 PF00902 Sec-independent protein translocase protein (TatC) C6M09_25630 PF02416 mttA/Hcf106 family C6M09_25635 PF03109 ABC1 family C6M09_25640 PF02036 SCP-2 sterol transfer family C6M09_25645 PF01209 ubiE/COQ5 methyltransferase family C6M09_25650 PF02646 RmuC family C6M09_25655 PF01048 Phosphorylase superfamily C6M09_25660 PF01738 Dienelactone hydrolase family C6M09_25665 PF01717 Cobalamin-independent synthase, Catalytic domain C6M09_25665 PF08267 Cobalamin-independent synthase, N-terminal domain C6M09_25670 PF03466 LysR substrate binding domain C6M09_25670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_25675 PF00892 EamA-like transporter family C6M09_25685 PF12146 Serine aminopeptidase, S33 C6M09_25690 PF01810 LysE type translocator C6M09_25695 PF04754 Putative transposase, YhgA-like C6M09_25700 PF01810 LysE type translocator C6M09_25705 PF00271 Helicase conserved C-terminal domain C6M09_25705 PF00270 DEAD/DEAH box helicase C6M09_25705 PF09382 RQC domain C6M09_25705 PF00570 HRDC domain C6M09_25705 PF16124 RecQ zinc-binding C6M09_25710 PF02253 Phospholipase A1 C6M09_25715 PF03061 Thioesterase superfamily C6M09_25720 PF00892 EamA-like transporter family C6M09_25725 PF01544 CorA-like Mg2+ transporter protein C6M09_25730 PF13361 UvrD-like helicase C-terminal domain C6M09_25730 PF00580 UvrD/REP helicase N-terminal domain C6M09_25735 PF13419 Haloacid dehalogenase-like hydrolase C6M09_25740 PF02899 Phage integrase, N-terminal SAM-like domain C6M09_25740 PF00589 Phage integrase family C6M09_25745 PF04340 Protein of unknown function, DUF484 C6M09_25750 PF01678 Diaminopimelate epimerase C6M09_25755 PF13627 Prokaryotic lipoprotein-attachment site C6M09_25760 PF01491 Frataxin-like domain C6M09_25765 PF01295 Adenylate cyclase, class-I C6M09_25765 PF12633 Adenylate cyclase NT domain C6M09_25770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C6M09_25770 PF03900 Porphobilinogen deaminase, C-terminal domain C6M09_25775 PF02602 Uroporphyrinogen-III synthase HemD C6M09_25780 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C6M09_25785 PF07219 HemY protein N-terminus C6M09_25785 PF07719 Tetratricopeptide repeat C6M09_25810 PF00324 Amino acid permease C6M09_25815 PF03808 Glycosyl transferase WecB/TagA/CpsF family C6M09_25820 PF06899 WzyE protein, O-antigen assembly polymerase C6M09_25825 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 C6M09_25830 PF01943 Polysaccharide biosynthesis protein C6M09_25835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C6M09_25845 PF00483 Nucleotidyl transferase C6M09_25850 PF16363 GDP-mannose 4,6 dehydratase C6M09_25855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C6M09_25855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C6M09_25855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C6M09_25860 PF02350 UDP-N-acetylglucosamine 2-epimerase C6M09_25865 PF02706 Chain length determinant protein C6M09_25870 PF00953 Glycosyl transferase family 4 C6M09_25875 PF07498 Rho termination factor, N-terminal domain C6M09_25875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C6M09_25875 PF07497 Rho termination factor, RNA-binding domain C6M09_25880 PF00085 Thioredoxin C6M09_25885 PF00270 DEAD/DEAH box helicase C6M09_25885 PF00271 Helicase conserved C-terminal domain C6M09_25890 PF02541 Ppx/GppA phosphatase family C6M09_25895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_25895 PF03466 LysR substrate binding domain C6M09_25905 PF04474 Protein of unknown function (DUF554) C6M09_25910 PF13361 UvrD-like helicase C-terminal domain C6M09_25910 PF00580 UvrD/REP helicase N-terminal domain C6M09_25925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C6M09_25925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C6M09_25930 PF03466 LysR substrate binding domain C6M09_25930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_25935 PF00291 Pyridoxal-phosphate dependent enzyme C6M09_25935 PF00585 C-terminal regulatory domain of Threonine dehydratase C6M09_25940 PF00920 Dehydratase family C6M09_25945 PF01063 Amino-transferase class IV C6M09_25955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6M09_25955 PF00205 Thiamine pyrophosphate enzyme, central domain C6M09_25955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6M09_25960 PF08046 IlvGEDA operon leader peptide C6M09_25965 PF01078 Magnesium chelatase, subunit ChlI C6M09_25965 PF13335 Magnesium chelatase, subunit ChlI C-terminal C6M09_25970 PF04219 Protein of unknown function, DUF C6M09_25975 PF03466 LysR substrate binding domain C6M09_25975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_26015 PF01177 Asp/Glu/Hydantoin racemase C6M09_26020 PF00593 TonB dependent receptor C6M09_26020 PF07715 TonB-dependent Receptor Plug Domain C6M09_26025 PF05958 tRNA (Uracil-5-)-methyltransferase C6M09_26030 PF07226 Protein of unknown function (DUF1422) C6M09_26035 PF00440 Bacterial regulatory proteins, tetR family C6M09_26040 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_26040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6M09_26045 PF03466 LysR substrate binding domain C6M09_26045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_26050 PF00206 Lyase C6M09_26050 PF14698 Argininosuccinate lyase C-terminal C6M09_26055 PF00696 Amino acid kinase family C6M09_26060 PF02774 Semialdehyde dehydrogenase, dimerisation domain C6M09_26060 PF01118 Semialdehyde dehydrogenase, NAD binding domain C6M09_26065 PF01546 Peptidase family M20/M25/M40 C6M09_26065 PF07687 Peptidase dimerisation domain C6M09_26070 PF00311 Phosphoenolpyruvate carboxylase C6M09_26075 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment C6M09_26080 PF12833 Helix-turn-helix domain C6M09_26085 PF00923 Transaldolase/Fructose-6-phosphate aldolase C6M09_26090 PF00465 Iron-containing alcohol dehydrogenase C6M09_26095 PF00892 EamA-like transporter family C6M09_26100 PF02219 Methylenetetrahydrofolate reductase C6M09_26105 PF03466 LysR substrate binding domain C6M09_26105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_26110 PF02627 Carboxymuconolactone decarboxylase family C6M09_26115 PF02872 5'-nucleotidase, C-terminal domain C6M09_26115 PF00149 Calcineurin-like phosphoesterase C6M09_26125 PF00742 Homoserine dehydrogenase C6M09_26125 PF03447 Homoserine dehydrogenase, NAD binding domain C6M09_26125 PF00696 Amino acid kinase family C6M09_26130 PF01053 Cys/Met metabolism PLP-dependent enzyme C6M09_26135 PF01340 Met Apo-repressor, MetJ C6M09_26140 PF01197 Ribosomal protein L31 C6M09_26145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C6M09_26145 PF18074 Primosomal protein N C-terminal domain C6M09_26145 PF17764 3′ DNA-binding domain (3′BD) C6M09_26145 PF00271 Helicase conserved C-terminal domain C6M09_26145 PF00270 DEAD/DEAH box helicase C6M09_26150 PF00356 Bacterial regulatory proteins, lacI family C6M09_26155 PF05036 Sporulation related domain C6M09_26160 PF00227 Proteasome subunit C6M09_26165 PF10431 C-terminal, D2-small domain, of ClpB protein C6M09_26165 PF00004 ATPase family associated with various cellular activities (AAA) C6M09_26165 PF07724 AAA domain (Cdc48 subfamily) C6M09_26170 PF01040 UbiA prenyltransferase family C6M09_26175 PF03737 Aldolase/RraA C6M09_26180 PF00365 Phosphofructokinase C6M09_26185 PF01545 Cation efflux family C6M09_26185 PF16916 Dimerisation domain of Zinc Transporter C6M09_26190 PF07813 LTXXQ motif family protein C6M09_26195 PF00486 Transcriptional regulatory protein, C terminal C6M09_26195 PF00072 Response regulator receiver domain C6M09_26200 PF00512 His Kinase A (phospho-acceptor) domain C6M09_26200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_26200 PF00672 HAMP domain C6M09_26200 PF16527 Two-component sensor protein CpxA, periplasmic domain C6M09_26205 PF03473 MOSC domain C6M09_26205 PF03475 3-alpha domain C6M09_26210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C6M09_26210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C6M09_26215 PF06379 L-rhamnose-proton symport protein (RhaT) C6M09_26220 PF02311 AraC-like ligand binding domain C6M09_26220 PF12833 Helix-turn-helix domain C6M09_26225 PF02311 AraC-like ligand binding domain C6M09_26225 PF12833 Helix-turn-helix domain C6M09_26230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6M09_26230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6M09_26235 PF06134 L-rhamnose isomerase (RhaA) C6M09_26240 PF00596 Class II Aldolase and Adducin N-terminal domain C6M09_26245 PF13407 Periplasmic binding protein domain C6M09_26250 PF00005 ABC transporter C6M09_26255 PF02653 Branched-chain amino acid transport system / permease component C6M09_26260 PF02653 Branched-chain amino acid transport system / permease component C6M09_26265 PF00465 Iron-containing alcohol dehydrogenase C6M09_26270 PF05336 L-rhamnose mutarotase C6M09_26275 PF01306 LacY proton/sugar symporter C6M09_26280 PF16875 Glycosyl hydrolase family 36 N-terminal domain C6M09_26280 PF16874 Glycosyl hydrolase family 36 C-terminal domain C6M09_26285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C6M09_26285 PF00356 Bacterial regulatory proteins, lacI family C6M09_26310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6M09_26320 PF01116 Fructose-bisphosphate aldolase class-II C6M09_26325 PF03611 PTS system sugar-specific permease component C6M09_26335 PF00365 Phosphofructokinase C6M09_26345 PF02634 FdhD/NarQ family C6M09_26355 PF13247 4Fe-4S dicluster domain C6M09_26355 PF09163 Formate dehydrogenase N, transmembrane C6M09_26360 PF01292 Prokaryotic cytochrome b561 C6M09_26365 PF04216 Protein involved in formate dehydrogenase formation C6M09_26380 PF07859 alpha/beta hydrolase fold C6M09_26385 PF09500 Putative thioesterase (yiiD_Cterm) C6M09_26385 PF00583 Acetyltransferase (GNAT) family C6M09_26390 PF02580 D-Tyr-tRNA(Tyr) deacylase C6M09_26395 PF03631 Virulence factor BrkB C6M09_26400 PF13419 Haloacid dehalogenase-like hydrolase C6M09_26405 PF03144 Elongation factor Tu domain 2 C6M09_26405 PF00679 Elongation factor G C-terminus C6M09_26405 PF00009 Elongation factor Tu GTP binding domain C6M09_26410 PF00120 Glutamine synthetase, catalytic domain C6M09_26410 PF03951 Glutamine synthetase, beta-Grasp domain C6M09_26415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6M09_26415 PF00512 His Kinase A (phospho-acceptor) domain C6M09_26415 PF00989 PAS fold C6M09_26420 PF02954 Bacterial regulatory protein, Fis family C6M09_26420 PF00158 Sigma-54 interaction domain C6M09_26420 PF00072 Response regulator receiver domain C6M09_26430 PF06969 HemN C-terminal domain C6M09_26430 PF04055 Radical SAM superfamily C6M09_26435 PF04220 Der GTPase activator (YihI) C6M09_26440 PF01926 50S ribosome-binding GTPase C6M09_26445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C6M09_26445 PF00476 DNA polymerase family A C6M09_26445 PF01612 3'-5' exonuclease C6M09_26445 PF01367 5'-3' exonuclease, C-terminal SAM fold C6M09_26450 PF01553 Acyltransferase C6M09_26455 PF01323 DSBA-like thioredoxin domain C6M09_26460 PF01636 Phosphotransferase enzyme family C6M09_26465 PF06288 Protein of unknown function (DUF1040) C6M09_26470 PF12804 MobA-like NTP transferase domain C6M09_26475 PF03205 Molybdopterin guanine dinucleotide synthesis protein B C6M09_26500 PF07729 FCD domain C6M09_26500 PF00392 Bacterial regulatory proteins, gntR family C6M09_26505 PF07690 Major Facilitator Superfamily C6M09_26510 PF00356 Bacterial regulatory proteins, lacI family C6M09_26515 PF00294 pfkB family carbohydrate kinase C6M09_26520 PF13407 Periplasmic binding protein domain C6M09_26525 PF02653 Branched-chain amino acid transport system / permease component C6M09_26530 PF00005 ABC transporter C6M09_26535 PF05025 RbsD / FucU transport protein family C6M09_26540 PF02705 K+ potassium transporter C6M09_26545 PF17868 AAA lid domain C6M09_26545 PF12592 Protein of unknown function (DUF3763) C6M09_26545 PF07728 AAA domain (dynein-related subfamily) C6M09_26550 PF05762 VWA domain containing CoxE-like protein C6M09_26555 PF03590 Aspartate-ammonia ligase C6M09_26560 PF01037 Lrp/AsnC ligand binding domain C6M09_26565 PF00258 Flavodoxin C6M09_26570 PF01134 Glucose inhibited division protein A C6M09_26570 PF13932 GidA associated domain C6M09_26575 PF02527 rRNA small subunit methyltransferase G C6M09_26580 PF03899 ATP synthase I chain C6M09_26585 PF00119 ATP synthase A chain C6M09_26590 PF00137 ATP synthase subunit C C6M09_26595 PF00430 ATP synthase B/B' CF(0) C6M09_26600 PF00213 ATP synthase delta (OSCP) subunit C6M09_26605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C6M09_26605 PF02874 ATP synthase alpha/beta family, beta-barrel domain C6M09_26605 PF00306 ATP synthase alpha/beta chain, C terminal domain C6M09_26610 PF00231 ATP synthase C6M09_26615 PF02874 ATP synthase alpha/beta family, beta-barrel domain C6M09_26615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C6M09_26620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C6M09_26620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C6M09_26625 PF12804 MobA-like NTP transferase domain C6M09_26625 PF00132 Bacterial transferase hexapeptide (six repeats) C6M09_26630 PF01380 SIS domain C6M09_26635 PF12849 PBP superfamily domain C6M09_26640 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_26645 PF00528 Binding-protein-dependent transport system inner membrane component C6M09_26650 PF00005 ABC transporter C6M09_26655 PF01895 PhoU domain C6M09_26660 PF11471 Maltoporin periplasmic N-terminal extension C6M09_26660 PF02264 LamB porin C6M09_26665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C6M09_26665 PF00756 Putative esterase C6M09_26670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C6M09_26675 PF13419 Haloacid dehalogenase-like hydrolase C6M09_26680 PF00860 Permease family C6M09_26685 PF03358 NADPH-dependent FMN reductase C6M09_26695 PF03466 LysR substrate binding domain C6M09_26695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6M09_26700 PF07690 Major Facilitator Superfamily C6M09_26710 PF10396 GTP-binding protein TrmE N-terminus C6M09_26710 PF12631 MnmE helical domain C6M09_26710 PF01926 50S ribosome-binding GTPase C6M09_26715 PF02096 60Kd inner membrane protein C6M09_26715 PF14849 YidC periplasmic domain C6M09_26720 PF01809 Putative membrane protein insertion efficiency factor C6M09_26725 PF00825 Ribonuclease P C6M09_26730 PF00468 Ribosomal protein L34 C6M09_26735 PF01051 Initiator Replication protein C6M09_26740 PF00239 Resolvase, N terminal domain C6M09_26740 PF02796 Helix-turn-helix domain of resolvase C6M09_26755 PF13610 DDE domain C6M09_26765 PF05857 TraX protein C6M09_26770 PF12602 Fertility inhibition protein N terminal C6M09_26770 PF04352 ProQ/FINO family C6M09_26790 PF01848 Hok/gef family C6M09_26795 PF10723 Replication regulatory protein RepB C6M09_26800 PF08048 Tap RepA1 leader peptide C6M09_26805 PF02387 IncFII RepA protein family C6M09_26810 PF02517 CPBP intramembrane metalloprotease C6M09_26820 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C6M09_26835 PF13610 DDE domain C6M09_26850 PF13737 Transposase DDE domain C6M09_26865 PF13610 DDE domain C6M09_26885 PF06952 PsiA protein C6M09_26890 PF06290 Plasmid SOS inhibition protein (PsiB) C6M09_26900 PF06006 Bacterial protein of unknown function (DUF905) C6M09_26910 PF06440 DNA polymerase III, theta subunit C6M09_26930 PF07128 Protein of unknown function (DUF1380) C6M09_26940 PF01555 DNA methylase C6M09_26945 PF02586 SOS response associated peptidase (SRAP) C6M09_26950 PF00717 Peptidase S24-like C6M09_26955 PF00817 impB/mucB/samB family C6M09_26955 PF13438 Domain of unknown function (DUF4113) C6M09_26955 PF11799 impB/mucB/samB family C-terminal domain C6M09_26960 PF08775 ParB family C6M09_26960 PF02195 ParB-like nuclease domain C6M09_26965 PF13614 AAA domain C6M09_26965 PF18607 ParA helix turn helix domain C6M09_26970 PF02796 Helix-turn-helix domain of resolvase C6M09_26970 PF00239 Resolvase, N terminal domain C6M09_26980 PF04754 Putative transposase, YhgA-like C6M09_27000 PF05598 Transposase domain (DUF772) C6M09_27000 PF01609 Transposase DDE domain C6M09_27015 PF13610 DDE domain C6M09_27020 PF00302 Chloramphenicol acetyltransferase C6M09_27030 PF13610 DDE domain C6M09_27040 PF02796 Helix-turn-helix domain of resolvase C6M09_27040 PF00239 Resolvase, N terminal domain C6M09_27055 PF01548 Transposase C6M09_27055 PF02371 Transposase IS116/IS110/IS902 family C6M09_27060 PF09278 MerR, DNA binding C6M09_27060 PF00376 MerR family regulatory protein C6M09_27065 PF02411 MerT mercuric transport protein C6M09_27070 PF00403 Heavy-metal-associated domain C6M09_27075 PF03203 MerC mercury resistance protein C6M09_27080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6M09_27080 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6M09_27080 PF00403 Heavy-metal-associated domain C6M09_27085 PF13411 MerR HTH family regulatory protein C6M09_27090 PF05052 MerE protein C6M09_27095 PF03707 Bacterial signalling protein N terminal repeat C6M09_27095 PF00990 Diguanylate cyclase, GGDEF domain C6M09_27095 PF00563 EAL domain C6M09_27095 PF13188 PAS domain C6M09_27105 PF13610 DDE domain C6M09_27135 PF13610 DDE domain C6M09_27140 PF08751 TrwC relaxase C6M09_27140 PF18340 DNA relaxase TraI 2B/2B-like domain C6M09_27140 PF07057 DNA helicase TraI C6M09_27140 PF18272 single-stranded DNA binding TraI N-terminal subdomain C6M09_27145 PF10412 Type IV secretion-system coupling protein DNA-binding domain C6M09_27145 PF12615 F sex factor protein N terminal C6M09_27155 PF05818 Enterobacterial TraT complement resistance protein C6M09_27165 PF07916 TraG-like protein, N-terminal region C6M09_27175 PF13610 DDE domain C6M09_27180 PF00239 Resolvase, N terminal domain C6M09_27180 PF02796 Helix-turn-helix domain of resolvase C6M09_27195 PF00440 Bacterial regulatory proteins, tetR family C6M09_27195 PF02909 Tetracyclin repressor-like, C-terminal domain C6M09_27200 PF07690 Major Facilitator Superfamily C6M09_27215 PF07057 DNA helicase TraI C6M09_27215 PF18340 DNA relaxase TraI 2B/2B-like domain C6M09_27215 PF08751 TrwC relaxase C6M09_27215 PF18272 single-stranded DNA binding TraI N-terminal subdomain C6M09_27300 PF00717 Peptidase S24-like C6M09_27305 PF11799 impB/mucB/samB family C-terminal domain C6M09_27305 PF00817 impB/mucB/samB family C6M09_27305 PF13438 Domain of unknown function (DUF4113) C6M09_27320 PF02195 ParB-like nuclease domain C6M09_27320 PF08775 ParB family C6M09_27325 PF11799 impB/mucB/samB family C-terminal domain C6M09_27325 PF00817 impB/mucB/samB family C6M09_27325 PF13438 Domain of unknown function (DUF4113) C6M09_27330 PF00717 Peptidase S24-like C6M09_27335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C6M09_27340 PF06406 StbA protein C6M09_27355 PF01555 DNA methylase C6M09_27365 PF07128 Protein of unknown function (DUF1380) C6M09_27375 PF03230 Antirestriction protein C6M09_27390 PF06440 DNA polymerase III, theta subunit C6M09_27415 PF00398 Ribosomal RNA adenine dimethylase C6M09_27420 PF00436 Single-strand binding protein family C6M09_27425 PF06006 Bacterial protein of unknown function (DUF905) C6M09_27430 PF02195 ParB-like nuclease domain C6M09_27435 PF06290 Plasmid SOS inhibition protein (PsiB) C6M09_27460 PF01848 Hok/gef family C6M09_27505 PF06067 Domain of unknown function (DUF932) C6M09_27515 PF01464 Transglycosylase SLT domain C6M09_27520 PF05261 TraM protein, DNA-binding C6M09_27530 PF05509 TraY domain C6M09_27535 PF05513 TraA C6M09_27540 PF07178 TraL protein C6M09_27550 PF13610 DDE domain C6M09_27560 PF01526 Tn3 transposase DDE domain C6M09_27560 PF13700 Domain of unknown function (DUF4158) C6M09_27575 PF13091 PLD-like domain C6M09_27575 PF13396 Phospholipase_D-nuclease N-terminal C6M09_27580 PF00437 Type II/IV secretion system protein C6M09_27585 PF03743 Bacterial conjugation TrbI-like protein C6M09_27595 PF04335 VirB8 protein C6M09_27615 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C6M09_27635 PF01464 Transglycosylase SLT domain C6M09_27675 PF00145 C-5 cytosine-specific DNA methylase C6M09_27675 PF18284 DNA methylase N-terminal domain C6M09_27680 PF09217 Restriction endonuclease EcoRII, N-terminal C6M09_27680 PF09019 EcoRII C terminal C6M09_27690 PF13610 DDE domain C6M09_27705 PF00809 Pterin binding enzyme C6M09_27710 PF00893 Small Multidrug Resistance protein C6M09_27715 PF13427 Domain of unknown function (DUF4111) C6M09_27715 PF01909 Nucleotidyltransferase domain C6M09_27720 PF00186 Dihydrofolate reductase C6M09_27730 PF13610 DDE domain C6M09_27740 PF13700 Domain of unknown function (DUF4158) C6M09_27740 PF01526 Tn3 transposase DDE domain C6M09_27745 PF01548 Transposase C6M09_27745 PF02371 Transposase IS116/IS110/IS902 family C6M09_27765 PF02463 RecF/RecN/SMC N terminal domain C6M09_27770 PF01850 PIN domain C6M09_27775 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C6M09_27810 PF00589 Phage integrase family C6M09_27825 PF01051 Initiator Replication protein C6M09_27830 PF13614 AAA domain C6M09_27830 PF18607 ParA helix turn helix domain C6M09_27865 PF04837 MbeB-like, N-term conserved region C6M09_27875 PF05713 Bacterial mobilisation protein (MobC)